File accession File format Output type Experiment accession Assay Biosample term id Biosample term name Biosample type Biosample organism Biosample treatments Biosample treatments amount Biosample treatments duration Experiment target Antibody accession Library made from Library depleted in Library extraction method Library lysis method Library crosslinking method Library strand specific Experiment date released Project RBNS protein concentration Library fragmentation method Library size range Biological replicate(s) Technical replicate Read length Mapped read length Run type Paired end Paired with Derived from Size Lab md5sum dbxrefs File download URL Assembly Platform Controlled by File Status Audit WARNING Audit INTERNAL_ACTION Audit NOT_COMPLIANT Audit ERROR ENCFF000QHA bigBed broadPeak peaks ENCSR000BLK ChIP-seq EFO:0002067 K562 cell line Homo sapiens SRF-human ENCAB000ALE DNA see document see document False 2011-07-18 ENCODE 1 1 ENCFF001ULJ 195958 Richard Myers, HAIB ca544479becfb08b77a30adaa6097016 https://www.encodeproject.org/files/ENCFF000QHA/@@download/ENCFF000QHA.bigBed hg19 archived low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient read depth, severe bottlenecking ENCFF000QHB bigBed broadPeak peaks ENCSR000BLK ChIP-seq EFO:0002067 K562 cell line Homo sapiens SRF-human ENCAB000ALE DNA see document see document False 2011-07-18 ENCODE 2 1 ENCFF001ULK 99838 Richard Myers, HAIB 59e586307856252c06a29d2741eca659 https://www.encodeproject.org/files/ENCFF000QHB/@@download/ENCFF000QHB.bigBed hg19 archived low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient read depth, severe bottlenecking ENCFF000QHC bam alignments ENCSR000BLK ChIP-seq EFO:0002067 K562 cell line Homo sapiens SRF-human ENCAB000ALE DNA see document see document False 2011-07-18 ENCODE 1 ENCFF000QHH 632184880 Richard Myers, HAIB 05c285e7ddb774f2db6740196612613f https://www.encodeproject.org/files/ENCFF000QHC/@@download/ENCFF000QHC.bam hg19 archived low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient read depth, severe bottlenecking ENCFF000QHD bam alignments ENCSR000BLK ChIP-seq EFO:0002067 K562 cell line Homo sapiens SRF-human ENCAB000ALE DNA see document see document False 2011-07-18 ENCODE 2 ENCFF000QHK 869672436 Richard Myers, HAIB 17668d715eecc1bd092db4dc7ced1a58 https://www.encodeproject.org/files/ENCFF000QHD/@@download/ENCFF000QHD.bam hg19 archived low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient read depth, severe bottlenecking ENCFF000QHE bigWig raw signal ENCSR000BLK ChIP-seq EFO:0002067 K562 cell line Homo sapiens SRF-human ENCAB000ALE DNA see document see document False 2011-07-18 ENCODE 1 1 15263858 Richard Myers, HAIB 68e168df7997a9ce33354dc4ee108f77 https://www.encodeproject.org/files/ENCFF000QHE/@@download/ENCFF000QHE.bigWig hg19 archived low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample, missing derived_from insufficient read depth, severe bottlenecking ENCFF000QHF bigWig raw signal ENCSR000BLK ChIP-seq EFO:0002067 K562 cell line Homo sapiens SRF-human ENCAB000ALE DNA see document see document False 2011-07-18 ENCODE 2 1 4120311 Richard Myers, HAIB 593608a854d262e5408b4e9e1fa779f7 https://www.encodeproject.org/files/ENCFF000QHF/@@download/ENCFF000QHF.bigWig hg19 archived low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample, missing derived_from insufficient read depth, severe bottlenecking ENCFF000QHH fastq reads ENCSR000BLK ChIP-seq EFO:0002067 K562 cell line Homo sapiens SRF-human ENCAB000ALE DNA see document see document False 2011-07-18 ENCODE 1 1 36 single-ended 651438557 Richard Myers, HAIB cb291288268993a2a612f6e0748fb72e https://www.encodeproject.org/files/ENCFF000QHH/@@download/ENCFF000QHH.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000QEX/ released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient read depth, severe bottlenecking ENCFF000QHK fastq reads ENCSR000BLK ChIP-seq EFO:0002067 K562 cell line Homo sapiens SRF-human ENCAB000ALE DNA see document see document False 2011-07-18 ENCODE 2 1 36 single-ended 748352199 Richard Myers, HAIB 40ad3dd7b116e91560d8c262ba71f967 https://www.encodeproject.org/files/ENCFF000QHK/@@download/ENCFF000QHK.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000QEX/ released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient read depth, severe bottlenecking ENCFF001ULJ bed broadPeak peaks ENCSR000BLK ChIP-seq EFO:0002067 K562 cell line Homo sapiens SRF-human ENCAB000ALE DNA see document see document False 2011-07-18 ENCODE 1 1 87568 Richard Myers, HAIB e602cafa0de928c4460de7049b3e5920 https://www.encodeproject.org/files/ENCFF001ULJ/@@download/ENCFF001ULJ.bed.gz hg19 archived low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample, missing derived_from insufficient read depth, severe bottlenecking ENCFF001ULK bed broadPeak peaks ENCSR000BLK ChIP-seq EFO:0002067 K562 cell line Homo sapiens SRF-human ENCAB000ALE DNA see document see document False 2011-07-18 ENCODE 2 1 33663 Richard Myers, HAIB c5f8ad23c60dd69bebf8a57349178118 https://www.encodeproject.org/files/ENCFF001ULK/@@download/ENCFF001ULK.bed.gz hg19 archived low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample, missing derived_from insufficient read depth, severe bottlenecking ENCFF002CMP bed narrowPeak optimal idr thresholded peaks ENCSR000BLK ChIP-seq EFO:0002067 K562 cell line Homo sapiens SRF-human ENCAB000ALE DNA see document see document False 2011-07-18 ENCODE 94422 ENCODE Consortium Analysis Working Group 4faa64e973c1fd4be5ecec209317dcc3 https://www.encodeproject.org/files/ENCFF002CMP/@@download/ENCFF002CMP.bed.gz hg19 archived low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample, missing derived_from insufficient read depth, severe bottlenecking ENCFF226JIN bigBed narrowPeak optimal idr thresholded peaks ENCSR000BLK ChIP-seq EFO:0002067 K562 cell line Homo sapiens SRF-human ENCAB000ALE DNA see document see document False 2011-07-18 ENCODE ENCFF002CMP 221430 ENCODE Consortium cd4d23d2fa60b0d29b8fa2652a2a6bc8 https://www.encodeproject.org/files/ENCFF226JIN/@@download/ENCFF226JIN.bigBed hg19 archived low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient read depth, severe bottlenecking ENCFF571WED bam alignments ENCSR000BLK ChIP-seq EFO:0002067 K562 cell line Homo sapiens SRF-human ENCAB000ALE DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000QHH, ENCFF643CGH 259662061 ENCODE Processing Pipeline 9354aaa27ff4366b9c2f262da69b81dd https://www.encodeproject.org/files/ENCFF571WED/@@download/ENCFF571WED.bam GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient read depth, severe bottlenecking ENCFF103BRE bam unfiltered alignments ENCSR000BLK ChIP-seq EFO:0002067 K562 cell line Homo sapiens SRF-human ENCAB000ALE DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000QHH, ENCFF643CGH 773853982 ENCODE Processing Pipeline 125101a167f23f99431b1396d6cdfff3 https://www.encodeproject.org/files/ENCFF103BRE/@@download/ENCFF103BRE.bam GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient read depth, severe bottlenecking ENCFF265HCR bam alignments ENCSR000BLK ChIP-seq EFO:0002067 K562 cell line Homo sapiens SRF-human ENCAB000ALE DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000QHK, ENCFF643CGH 636987345 ENCODE Processing Pipeline 8baaa57b7d1b931526f7ab6b50fd4431 https://www.encodeproject.org/files/ENCFF265HCR/@@download/ENCFF265HCR.bam GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient read depth, severe bottlenecking ENCFF039HVS bam unfiltered alignments ENCSR000BLK ChIP-seq EFO:0002067 K562 cell line Homo sapiens SRF-human ENCAB000ALE DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000QHK, ENCFF643CGH 1030313816 ENCODE Processing Pipeline e7ec22e223d3d958765479260836fa93 https://www.encodeproject.org/files/ENCFF039HVS/@@download/ENCFF039HVS.bam GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient read depth, severe bottlenecking ENCFF986QFI bam unfiltered alignments ENCSR000BLK ChIP-seq EFO:0002067 K562 cell line Homo sapiens SRF-human ENCAB000ALE DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000QHH, ENCFF807MUK 772251214 ENCODE Processing Pipeline 1fd5cd2b34724d7e33ffd0b7961953dc https://www.encodeproject.org/files/ENCFF986QFI/@@download/ENCFF986QFI.bam hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient read depth, severe bottlenecking ENCFF150DRD bam alignments ENCSR000BLK ChIP-seq EFO:0002067 K562 cell line Homo sapiens SRF-human ENCAB000ALE DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000QHH, ENCFF807MUK 259843522 ENCODE Processing Pipeline 5ab4e8e028d281d4495d00a62d595828 https://www.encodeproject.org/files/ENCFF150DRD/@@download/ENCFF150DRD.bam hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient read depth, severe bottlenecking ENCFF537NSW bam unfiltered alignments ENCSR000BLK ChIP-seq EFO:0002067 K562 cell line Homo sapiens SRF-human ENCAB000ALE DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000QHK, ENCFF807MUK 1026128599 ENCODE Processing Pipeline e6235e40c41faea7c4d6841ae6c43f4b https://www.encodeproject.org/files/ENCFF537NSW/@@download/ENCFF537NSW.bam hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient read depth, severe bottlenecking ENCFF835KEE bam alignments ENCSR000BLK ChIP-seq EFO:0002067 K562 cell line Homo sapiens SRF-human ENCAB000ALE DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000QHK, ENCFF807MUK 637349792 ENCODE Processing Pipeline ab464fa612484d049c6159c1d8995f2f https://www.encodeproject.org/files/ENCFF835KEE/@@download/ENCFF835KEE.bam hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient read depth, severe bottlenecking ENCFF000ZUM bigBed narrowPeak peaks ENCSR000DJX ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-JUND-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE ENCFF001VRL 2545653 Kevin White, UChicago 22b9d911d76c4a054b46d577176dd9ef https://www.encodeproject.org/files/ENCFF000ZUM/@@download/ENCFF000ZUM.bigBed hg19 archived missing genetic modification characterization, low read depth, low read length ENCFF000ZUN bam alignments ENCSR000DJX ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-JUND-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 666293252 Kevin White, UChicago bd36ef191fc05037bd2f96ec652c6846 https://www.encodeproject.org/files/ENCFF000ZUN/@@download/ENCFF000ZUN.bam hg19 archived missing genetic modification characterization, low read depth, low read length missing derived_from ENCFF000ZUO bigWig signal ENCSR000DJX ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-JUND-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 293150582 Kevin White, UChicago 57d573177b770eb54f2fcd07c2cad947 https://www.encodeproject.org/files/ENCFF000ZUO/@@download/ENCFF000ZUO.bigWig hg19 archived missing genetic modification characterization, low read depth, low read length missing derived_from ENCFF000ZUP bam alignments ENCSR000DJX ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-JUND-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 591209476 Kevin White, UChicago 4085b02dbdd2566182fdd58ac4de2303 https://www.encodeproject.org/files/ENCFF000ZUP/@@download/ENCFF000ZUP.bam hg19 archived missing genetic modification characterization, low read depth, low read length missing derived_from ENCFF000ZUT bam alignments ENCSR000DJX ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-JUND-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 643909866 Kevin White, UChicago 4a0b9cb58e45cb14e46840e405d14d4e https://www.encodeproject.org/files/ENCFF000ZUT/@@download/ENCFF000ZUT.bam hg19 archived missing genetic modification characterization, low read depth, low read length missing derived_from ENCFF000ZUU fastq reads ENCSR000DJX ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-JUND-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 1 1 36 single-ended 791231822 Kevin White, UChicago 47860582137a853304202933c97a9b12 https://www.encodeproject.org/files/ENCFF000ZUU/@@download/ENCFF000ZUU.fastq.gz Illumina Genome Analyzer II /files/ENCFF000ZVJ/ released missing genetic modification characterization, low read depth, low read length ENCFF000ZVC fastq reads ENCSR000DJX ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-JUND-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 2 1 36 single-ended 691656623 Kevin White, UChicago 003369f1d8496de1f023593119b4b19a https://www.encodeproject.org/files/ENCFF000ZVC/@@download/ENCFF000ZVC.fastq.gz Illumina Genome Analyzer II /files/ENCFF000ZWC/ released missing genetic modification characterization, low read depth, low read length ENCFF000ZVD fastq reads ENCSR000DJX ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-JUND-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 3 1 36 single-ended 767966836 Kevin White, UChicago 97c5019479b18da8739b02190c668d36 https://www.encodeproject.org/files/ENCFF000ZVD/@@download/ENCFF000ZVD.fastq.gz Illumina Genome Analyzer II /files/ENCFF000ZWA/ released missing genetic modification characterization, low read depth, low read length ENCFF001VRL bed narrowPeak peaks ENCSR000DJX ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-JUND-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 1330450 Kevin White, UChicago 97c915f0ad3c41a65bf4d61458d07c9b https://www.encodeproject.org/files/ENCFF001VRL/@@download/ENCFF001VRL.bed.gz hg19 archived missing genetic modification characterization, low read depth, low read length missing derived_from ENCFF002DDZ bed narrowPeak optimal idr thresholded peaks ENCSR000DJX ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-JUND-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 641106 ENCODE Consortium Analysis Working Group 0367fe66391eb886b08ee41a26b60788 https://www.encodeproject.org/files/ENCFF002DDZ/@@download/ENCFF002DDZ.bed.gz hg19 archived missing genetic modification characterization, low read depth, low read length missing derived_from ENCFF932HPG bigBed narrowPeak optimal idr thresholded peaks ENCSR000DJX ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-JUND-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE ENCFF002DDZ 1432534 ENCODE Consortium 2b52eccd5f9c465a8da70d8475508dbf https://www.encodeproject.org/files/ENCFF932HPG/@@download/ENCFF932HPG.bigBed hg19 archived missing genetic modification characterization, low read depth, low read length ENCFF129OTK bam unfiltered alignments ENCSR000DJX ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-JUND-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 3 36 ENCFF000ZVD, ENCFF807MUK 923051701 ENCODE Processing Pipeline 8f165ef08da46f1bcf96f799f9019bea https://www.encodeproject.org/files/ENCFF129OTK/@@download/ENCFF129OTK.bam hg19 released missing genetic modification characterization, low read depth, low read length ENCFF676GIL bam unfiltered alignments ENCSR000DJX ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-JUND-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 2 36 ENCFF000ZVC, ENCFF807MUK 850898705 ENCODE Processing Pipeline 94c187b6de5398317ec4b782998c8b2c https://www.encodeproject.org/files/ENCFF676GIL/@@download/ENCFF676GIL.bam hg19 released missing genetic modification characterization, low read depth, low read length ENCFF319EWR bam unfiltered alignments ENCSR000DJX ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-JUND-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 2 36 ENCFF000ZVC, ENCFF643CGH 855591315 ENCODE Processing Pipeline 5c0cdc0fb2598df02b4875bd16a04e32 https://www.encodeproject.org/files/ENCFF319EWR/@@download/ENCFF319EWR.bam GRCh38 released missing genetic modification characterization, low read depth, low read length ENCFF789TTO bam unfiltered alignments ENCSR000DJX ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-JUND-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 1 36 ENCFF000ZUU, ENCFF643CGH 970141443 ENCODE Processing Pipeline fbec9c1c8b5425958df29d179f70a313 https://www.encodeproject.org/files/ENCFF789TTO/@@download/ENCFF789TTO.bam GRCh38 released missing genetic modification characterization, low read depth, low read length ENCFF907DYN bam unfiltered alignments ENCSR000DJX ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-JUND-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 1 36 ENCFF000ZUU, ENCFF807MUK 966057291 ENCODE Processing Pipeline 0e3399cc93df94ce6e3341fa376819a3 https://www.encodeproject.org/files/ENCFF907DYN/@@download/ENCFF907DYN.bam hg19 released missing genetic modification characterization, low read depth, low read length ENCFF529VEA bam alignments ENCSR000DJX ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-JUND-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 3 36 ENCFF000ZVD, ENCFF807MUK 649969598 ENCODE Processing Pipeline b7ee2f5361cb416c343f41d41b465464 https://www.encodeproject.org/files/ENCFF529VEA/@@download/ENCFF529VEA.bam hg19 released missing genetic modification characterization, low read depth, low read length ENCFF058KXK bam unfiltered alignments ENCSR000DJX ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-JUND-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 3 36 ENCFF000ZVD, ENCFF643CGH 925591602 ENCODE Processing Pipeline 488468298898640992a10ebec6365f55 https://www.encodeproject.org/files/ENCFF058KXK/@@download/ENCFF058KXK.bam GRCh38 released missing genetic modification characterization, low read depth, low read length ENCFF110QRO bam alignments ENCSR000DJX ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-JUND-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 2 36 ENCFF000ZVC, ENCFF643CGH 606685206 ENCODE Processing Pipeline 3bb109d3d15366b37ebf200b6b8767a9 https://www.encodeproject.org/files/ENCFF110QRO/@@download/ENCFF110QRO.bam GRCh38 released missing genetic modification characterization, low read depth, low read length ENCFF387ZWT bam alignments ENCSR000DJX ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-JUND-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 1 36 ENCFF000ZUU, ENCFF643CGH 678093882 ENCODE Processing Pipeline 2ea7083741302c7f78ec5f262317f89a https://www.encodeproject.org/files/ENCFF387ZWT/@@download/ENCFF387ZWT.bam GRCh38 released missing genetic modification characterization, low read depth, low read length ENCFF661MOG bam alignments ENCSR000DJX ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-JUND-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 3 36 ENCFF000ZVD, ENCFF643CGH 649394197 ENCODE Processing Pipeline 0e3e70d6cba7e8561d4f93741cc86253 https://www.encodeproject.org/files/ENCFF661MOG/@@download/ENCFF661MOG.bam GRCh38 released missing genetic modification characterization, low read depth, low read length ENCFF823BYH bam alignments ENCSR000DJX ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-JUND-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 1 36 ENCFF000ZUU, ENCFF807MUK 678487166 ENCODE Processing Pipeline ad3f823edc5d7a82a3f89a1c50be29e6 https://www.encodeproject.org/files/ENCFF823BYH/@@download/ENCFF823BYH.bam hg19 released missing genetic modification characterization, low read depth, low read length ENCFF164CZG bam alignments ENCSR000DJX ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-JUND-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 2 36 ENCFF000ZVC, ENCFF807MUK 607009763 ENCODE Processing Pipeline 2d8f730470cb85f2114f0f7f0d40eab6 https://www.encodeproject.org/files/ENCFF164CZG/@@download/ENCFF164CZG.bam hg19 released missing genetic modification characterization, low read depth, low read length ENCFF000QKL bigBed broadPeak peaks ENCSR000BKF ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB33-human ENCAB000AML DNA see document see document False 2011-07-18 ENCODE 1 1 ENCFF001UMF 392685 Richard Myers, HAIB 7db843dd65cba436018cab010280e3c7 https://www.encodeproject.org/files/ENCFF000QKL/@@download/ENCFF000QKL.bigBed hg19 archived low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample ENCFF000QKM bigBed broadPeak peaks ENCSR000BKF ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB33-human ENCAB000AML DNA see document see document False 2011-07-18 ENCODE 2 1 ENCFF001UMG 394121 Richard Myers, HAIB 737e5262792615848bf0fe1d59c2c98e https://www.encodeproject.org/files/ENCFF000QKM/@@download/ENCFF000QKM.bigBed hg19 archived low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample ENCFF000QKN bam alignments ENCSR000BKF ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB33-human ENCAB000AML DNA see document see document False 2011-07-18 ENCODE 1 ENCFF000QKS 1746404953 Richard Myers, HAIB 3774a5390f247dda8afac13acab38447 https://www.encodeproject.org/files/ENCFF000QKN/@@download/ENCFF000QKN.bam hg19 archived low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample ENCFF000QKO bam alignments ENCSR000BKF ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB33-human ENCAB000AML DNA see document see document False 2011-07-18 ENCODE 2 ENCFF000QKR 985696386 Richard Myers, HAIB 83acc5a6cbcd86882386fa7d57e5a7b8 https://www.encodeproject.org/files/ENCFF000QKO/@@download/ENCFF000QKO.bam hg19 archived low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample ENCFF000QKP bigWig raw signal ENCSR000BKF ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB33-human ENCAB000AML DNA see document see document False 2011-07-18 ENCODE 1 1 20258758 Richard Myers, HAIB bab60b786eb51bb778f4516f03db5c56 https://www.encodeproject.org/files/ENCFF000QKP/@@download/ENCFF000QKP.bigWig hg19 archived low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample, missing derived_from ENCFF000QKQ bigWig raw signal ENCSR000BKF ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB33-human ENCAB000AML DNA see document see document False 2011-07-18 ENCODE 2 1 13032175 Richard Myers, HAIB 62903f97efc36dd45ccc56e6fc53dffb https://www.encodeproject.org/files/ENCFF000QKQ/@@download/ENCFF000QKQ.bigWig hg19 archived low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample, missing derived_from ENCFF000QKR fastq reads ENCSR000BKF ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB33-human ENCAB000AML DNA see document see document False 2011-07-18 ENCODE 2 1 36 single-ended 621976160 Richard Myers, HAIB 603d882e6bf9855161b0968cae3b5160 https://www.encodeproject.org/files/ENCFF000QKR/@@download/ENCFF000QKR.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000QEX/ released low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample ENCFF000QKS fastq reads ENCSR000BKF ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB33-human ENCAB000AML DNA see document see document False 2011-07-18 ENCODE 1 1 36 single-ended 1166293359 Richard Myers, HAIB 5f0333de850f44b6599f2d7a0afab2ba https://www.encodeproject.org/files/ENCFF000QKS/@@download/ENCFF000QKS.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000QEX/ released low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample ENCFF001UMF bed broadPeak peaks ENCSR000BKF ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB33-human ENCAB000AML DNA see document see document False 2011-07-18 ENCODE 1 1 160079 Richard Myers, HAIB d2048fc1ee2efded3b6b7e6cd3f1ce43 https://www.encodeproject.org/files/ENCFF001UMF/@@download/ENCFF001UMF.bed.gz hg19 archived low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample, missing derived_from ENCFF001UMG bed broadPeak peaks ENCSR000BKF ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB33-human ENCAB000AML DNA see document see document False 2011-07-18 ENCODE 2 1 187196 Richard Myers, HAIB 46c375ad08192c162a48b9954ddfe3c9 https://www.encodeproject.org/files/ENCFF001UMG/@@download/ENCFF001UMG.bed.gz hg19 archived low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample, missing derived_from ENCFF002CMY bed narrowPeak optimal idr thresholded peaks ENCSR000BKF ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB33-human ENCAB000AML DNA see document see document False 2011-07-18 ENCODE 82229 ENCODE Consortium Analysis Working Group 2ceb0000094de3d0931fe48293f28276 https://www.encodeproject.org/files/ENCFF002CMY/@@download/ENCFF002CMY.bed.gz hg19 archived low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample, missing derived_from ENCFF324HUB bigBed narrowPeak optimal idr thresholded peaks ENCSR000BKF ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB33-human ENCAB000AML DNA see document see document False 2011-07-18 ENCODE ENCFF002CMY 260242 ENCODE Consortium 87ab560b82e67fb00b66b378ad65c883 https://www.encodeproject.org/files/ENCFF324HUB/@@download/ENCFF324HUB.bigBed hg19 archived low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample ENCFF773RXE bam alignments ENCSR000BKF ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB33-human ENCAB000AML DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000QKR, ENCFF643CGH 520997157 ENCODE Processing Pipeline 3e6bb85d8b13378c37fc7b92dc40b710 https://www.encodeproject.org/files/ENCFF773RXE/@@download/ENCFF773RXE.bam GRCh38 released low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample ENCFF199BYU bam unfiltered alignments ENCSR000BKF ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB33-human ENCAB000AML DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000QKR, ENCFF643CGH 851990569 ENCODE Processing Pipeline e1bf0ce950381b5288c727629c0e7f4e https://www.encodeproject.org/files/ENCFF199BYU/@@download/ENCFF199BYU.bam GRCh38 released low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample ENCFF099IWI bam unfiltered alignments ENCSR000BKF ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB33-human ENCAB000AML DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000QKS, ENCFF643CGH 1513860898 ENCODE Processing Pipeline f2b4a40feee9f0a72220756a69636dfe https://www.encodeproject.org/files/ENCFF099IWI/@@download/ENCFF099IWI.bam GRCh38 released low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample ENCFF133IED bam alignments ENCSR000BKF ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB33-human ENCAB000AML DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000QKS, ENCFF643CGH 831563902 ENCODE Processing Pipeline 2beaa97c93830cfe7182e89623cced25 https://www.encodeproject.org/files/ENCFF133IED/@@download/ENCFF133IED.bam GRCh38 released low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample ENCFF256OBB bam unfiltered alignments ENCSR000BKF ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB33-human ENCAB000AML DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000QKR, ENCFF807MUK 848372221 ENCODE Processing Pipeline 3573ba8cd279f62d73b0a6a7c4f283aa https://www.encodeproject.org/files/ENCFF256OBB/@@download/ENCFF256OBB.bam hg19 released low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample ENCFF274SHE bam alignments ENCSR000BKF ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB33-human ENCAB000AML DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000QKR, ENCFF807MUK 521333720 ENCODE Processing Pipeline d4fe6f40ec43d135b6cd0ef919b57cce https://www.encodeproject.org/files/ENCFF274SHE/@@download/ENCFF274SHE.bam hg19 released low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample ENCFF236ZAA bam alignments ENCSR000BKF ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB33-human ENCAB000AML DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000QKS, ENCFF807MUK 831961282 ENCODE Processing Pipeline 7b81573a419becaee87e3bc8dc5934b8 https://www.encodeproject.org/files/ENCFF236ZAA/@@download/ENCFF236ZAA.bam hg19 released low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample ENCFF550OKM bam unfiltered alignments ENCSR000BKF ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB33-human ENCAB000AML DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000QKS, ENCFF807MUK 1509523128 ENCODE Processing Pipeline 2110e2e57ce9318c35163540bea55080 https://www.encodeproject.org/files/ENCFF550OKM/@@download/ENCFF550OKM.bam hg19 released low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample ENCFF000RVQ bam alignments ENCSR000DLZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MYC-human ENCAB000AET DNA see document see document False 2011-03-17 ENCODE 1 ENCFF000RWD 432454505 Vishwanath Iyer, UTA 9eff836229f83a0cf38614f075b72729 https://www.encodeproject.org/files/ENCFF000RVQ/@@download/ENCFF000RVQ.bam hg19 archived mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF000RVS bam alignments ENCSR000DLZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MYC-human ENCAB000AET DNA see document see document False 2011-03-17 ENCODE 2 ENCFF000RWE 300095434 Vishwanath Iyer, UTA 987882ebc78baa6bc53babce7e53d439 https://www.encodeproject.org/files/ENCFF000RVS/@@download/ENCFF000RVS.bam hg19 archived mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF000RVT bigWig base overlap signal ENCSR000DLZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MYC-human ENCAB000AET DNA see document see document False 2011-03-17 ENCODE 186871179 Vishwanath Iyer, UTA b3051f4439559401743c547b289d4f56 https://www.encodeproject.org/files/ENCFF000RVT/@@download/ENCFF000RVT.bigWig hg19 archived mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample, missing derived_from insufficient read length, insufficient read depth ENCFF000RVU bam alignments ENCSR000DLZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MYC-human ENCAB000AET DNA see document see document False 2011-03-17 ENCODE 3 ENCFF000RWG 341576937 Vishwanath Iyer, UTA 0547986e5dd992de98ab149d8ca2e932 https://www.encodeproject.org/files/ENCFF000RVU/@@download/ENCFF000RVU.bam hg19 archived mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF000RVV bigBed narrowPeak peaks ENCSR000DLZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MYC-human ENCAB000AET DNA see document see document False 2011-03-17 ENCODE ENCFF001UTC 1441087 Vishwanath Iyer, UTA ab3485ed6369d1ce79504ef3baf78de6 https://www.encodeproject.org/files/ENCFF000RVV/@@download/ENCFF000RVV.bigBed hg19 archived mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF000RVX bigWig signal ENCSR000DLZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MYC-human ENCAB000AET DNA see document see document False 2011-03-17 ENCODE 2827844490 Vishwanath Iyer, UTA ac8a6c353b4fdbf087f31e54f56643f5 https://www.encodeproject.org/files/ENCFF000RVX/@@download/ENCFF000RVX.bigWig hg19 archived mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample, missing derived_from insufficient read length, insufficient read depth ENCFF000RVY tar validation ENCSR000DLZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MYC-human ENCAB000AET DNA see document see document False 2011-03-17 ENCODE 50679616 Vishwanath Iyer, UTA 1c69f30938898c91098f969c6bd46fa0 https://www.encodeproject.org/files/ENCFF000RVY/@@download/ENCFF000RVY.tar.gz hg19 archived mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample, missing derived_from insufficient read length, insufficient read depth ENCFF000RWD fastq reads ENCSR000DLZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MYC-human ENCAB000AET DNA see document see document False 2011-03-17 ENCODE 1 1 35 single-ended 419080559 Vishwanath Iyer, UTA 79cc7260d5c1c77f6cfd586aadd18984 https://www.encodeproject.org/files/ENCFF000RWD/@@download/ENCFF000RWD.fastq.gz Illumina Genome Analyzer /files/ENCFF000RWS/ released mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF000RWE fastq reads ENCSR000DLZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MYC-human ENCAB000AET DNA see document see document False 2011-03-17 ENCODE 2 1 35 single-ended 330706495 Vishwanath Iyer, UTA 65aaa71a340369df8dca70a50a78a92a https://www.encodeproject.org/files/ENCFF000RWE/@@download/ENCFF000RWE.fastq.gz Illumina Genome Analyzer /files/ENCFF000RWS/ released mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF000RWG fastq reads ENCSR000DLZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MYC-human ENCAB000AET DNA see document see document False 2011-03-17 ENCODE 3 1 35 single-ended 381912349 Vishwanath Iyer, UTA 59b616640a9f9254f8515e7748cc5934 https://www.encodeproject.org/files/ENCFF000RWG/@@download/ENCFF000RWG.fastq.gz Illumina Genome Analyzer /files/ENCFF000RWS/ released mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF001UTC bed narrowPeak peaks ENCSR000DLZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MYC-human ENCAB000AET DNA see document see document False 2011-03-17 ENCODE 687895 Vishwanath Iyer, UTA 286efa162c05702c48d2945e6062b946 https://www.encodeproject.org/files/ENCFF001UTC/@@download/ENCFF001UTC.bed.gz hg19 archived mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample, missing derived_from insufficient read length, insufficient read depth ENCFF002DBC bed narrowPeak optimal idr thresholded peaks ENCSR000DLZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MYC-human ENCAB000AET DNA see document see document False 2011-03-17 ENCODE 296247 ENCODE Consortium Analysis Working Group de830fcb2f6b0e36e7dccfd232d3ae48 https://www.encodeproject.org/files/ENCFF002DBC/@@download/ENCFF002DBC.bed.gz hg19 archived mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample, missing derived_from insufficient read length, insufficient read depth ENCFF579JJJ bigBed narrowPeak optimal idr thresholded peaks ENCSR000DLZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MYC-human ENCAB000AET DNA see document see document False 2011-03-17 ENCODE ENCFF002DBC 699450 ENCODE Consortium a32e0b22fed5e092c46b790a892b5d2c https://www.encodeproject.org/files/ENCFF579JJJ/@@download/ENCFF579JJJ.bigBed hg19 archived mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF185FQG bam unfiltered alignments ENCSR000DLZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MYC-human ENCAB000AET DNA see document see document False 2011-03-17 ENCODE 3 35 ENCFF000RWG, ENCFF643CGH 493470785 ENCODE Processing Pipeline d22778319317cb8088c82c075a1563de https://www.encodeproject.org/files/ENCFF185FQG/@@download/ENCFF185FQG.bam GRCh38 released mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF980SLK bam unfiltered alignments ENCSR000DLZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MYC-human ENCAB000AET DNA see document see document False 2011-03-17 ENCODE 2 35 ENCFF000RWE, ENCFF643CGH 433651799 ENCODE Processing Pipeline 2b135073b4c4d41138e8b06f8c9af737 https://www.encodeproject.org/files/ENCFF980SLK/@@download/ENCFF980SLK.bam GRCh38 released mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF307MJD bam unfiltered alignments ENCSR000DLZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MYC-human ENCAB000AET DNA see document see document False 2011-03-17 ENCODE 3 35 ENCFF000RWG, ENCFF807MUK 490661858 ENCODE Processing Pipeline 43195677e030cee30dcbda84142124d5 https://www.encodeproject.org/files/ENCFF307MJD/@@download/ENCFF307MJD.bam hg19 released mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF124AKW bam alignments ENCSR000DLZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MYC-human ENCAB000AET DNA see document see document False 2011-03-17 ENCODE 1 35 ENCFF000RWD, ENCFF807MUK 303288992 ENCODE Processing Pipeline 6b9d910aeb007959d16728f874e7bbc1 https://www.encodeproject.org/files/ENCFF124AKW/@@download/ENCFF124AKW.bam hg19 released mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF440DMK bam alignments ENCSR000DLZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MYC-human ENCAB000AET DNA see document see document False 2011-03-17 ENCODE 2 35 ENCFF000RWE, ENCFF643CGH 198489847 ENCODE Processing Pipeline 7ad9e47a437ad2c9eb42c1b03f01e884 https://www.encodeproject.org/files/ENCFF440DMK/@@download/ENCFF440DMK.bam GRCh38 released mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF310SVZ bam alignments ENCSR000DLZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MYC-human ENCAB000AET DNA see document see document False 2011-03-17 ENCODE 3 35 ENCFF000RWG, ENCFF807MUK 212225515 ENCODE Processing Pipeline 64e4186c57594108c100c2c421fec84d https://www.encodeproject.org/files/ENCFF310SVZ/@@download/ENCFF310SVZ.bam hg19 released mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF042SCZ bam alignments ENCSR000DLZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MYC-human ENCAB000AET DNA see document see document False 2011-03-17 ENCODE 2 35 ENCFF000RWE, ENCFF807MUK 198732548 ENCODE Processing Pipeline 27128534f0bbfde6f42dd47c978f10b2 https://www.encodeproject.org/files/ENCFF042SCZ/@@download/ENCFF042SCZ.bam hg19 released mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF403SIA bam unfiltered alignments ENCSR000DLZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MYC-human ENCAB000AET DNA see document see document False 2011-03-17 ENCODE 2 35 ENCFF000RWE, ENCFF807MUK 431453646 ENCODE Processing Pipeline 639b7f7bed91ad6b7b60c136fcdf9ad6 https://www.encodeproject.org/files/ENCFF403SIA/@@download/ENCFF403SIA.bam hg19 released mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF599CXO bam unfiltered alignments ENCSR000DLZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MYC-human ENCAB000AET DNA see document see document False 2011-03-17 ENCODE 1 35 ENCFF000RWD, ENCFF643CGH 557758100 ENCODE Processing Pipeline 04cf75333c43123288cd50b1e628ef8e https://www.encodeproject.org/files/ENCFF599CXO/@@download/ENCFF599CXO.bam GRCh38 released mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF936OBZ bam alignments ENCSR000DLZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MYC-human ENCAB000AET DNA see document see document False 2011-03-17 ENCODE 3 35 ENCFF000RWG, ENCFF643CGH 211914606 ENCODE Processing Pipeline fc058e926090fe3f5a527702253e542c https://www.encodeproject.org/files/ENCFF936OBZ/@@download/ENCFF936OBZ.bam GRCh38 released mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF449JIA bam unfiltered alignments ENCSR000DLZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MYC-human ENCAB000AET DNA see document see document False 2011-03-17 ENCODE 1 35 ENCFF000RWD, ENCFF807MUK 554732479 ENCODE Processing Pipeline c5b8c86e2f121b1b8a793e34183e3575 https://www.encodeproject.org/files/ENCFF449JIA/@@download/ENCFF449JIA.bam hg19 released mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF826IIW bam alignments ENCSR000DLZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MYC-human ENCAB000AET DNA see document see document False 2011-03-17 ENCODE 1 35 ENCFF000RWD, ENCFF643CGH 302995788 ENCODE Processing Pipeline c43e0a204c5e280c7b0501550ca51225 https://www.encodeproject.org/files/ENCFF826IIW/@@download/ENCFF826IIW.bam GRCh38 released mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF000ZTM bam alignments ENCSR000DKB ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-FOS-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 621471765 Kevin White, UChicago ff072d5cad866bbf58a8b6c823bfeeb0 https://www.encodeproject.org/files/ENCFF000ZTM/@@download/ENCFF000ZTM.bam hg19 archived missing genetic modification characterization, low read depth, low read length missing derived_from ENCFF000ZTN bigBed narrowPeak peaks ENCSR000DKB ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-FOS-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE ENCFF001VRH 788364 Kevin White, UChicago c2a2f9a7cbb57398498a4d371b5bc049 https://www.encodeproject.org/files/ENCFF000ZTN/@@download/ENCFF000ZTN.bigBed hg19 archived missing genetic modification characterization, low read depth, low read length ENCFF000ZTP bigWig signal ENCSR000DKB ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-FOS-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 292737292 Kevin White, UChicago c7fb5effb153da5168b5c039a92f3a93 https://www.encodeproject.org/files/ENCFF000ZTP/@@download/ENCFF000ZTP.bigWig hg19 archived missing genetic modification characterization, low read depth, low read length missing derived_from ENCFF000ZTS bam alignments ENCSR000DKB ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-FOS-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 397454130 Kevin White, UChicago 11f08557c08af8d1c2a5291c74e33f5b https://www.encodeproject.org/files/ENCFF000ZTS/@@download/ENCFF000ZTS.bam hg19 archived missing genetic modification characterization, low read depth, low read length missing derived_from ENCFF000ZTT bam alignments ENCSR000DKB ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-FOS-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 533323686 Kevin White, UChicago 3fd0e58f252d989eb584d42d292906fa https://www.encodeproject.org/files/ENCFF000ZTT/@@download/ENCFF000ZTT.bam hg19 archived missing genetic modification characterization, low read depth, low read length missing derived_from ENCFF000ZTY fastq reads ENCSR000DKB ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-FOS-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 1 1 36 single-ended 828370687 Kevin White, UChicago 9935e947c7ed31bb7195b35c999628bd https://www.encodeproject.org/files/ENCFF000ZTY/@@download/ENCFF000ZTY.fastq.gz Illumina Genome Analyzer II /files/ENCFF000ZVJ/ released missing genetic modification characterization, low read depth, low read length ENCFF000ZUD fastq reads ENCSR000DKB ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-FOS-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 2 1 36 single-ended 628714575 Kevin White, UChicago 570525d41fdb33981b63f962d0cbfaa1 https://www.encodeproject.org/files/ENCFF000ZUD/@@download/ENCFF000ZUD.fastq.gz Illumina Genome Analyzer II /files/ENCFF000ZVI/ released missing genetic modification characterization, low read depth, low read length ENCFF000ZUE fastq reads ENCSR000DKB ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-FOS-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 3 1 36 single-ended 469532764 Kevin White, UChicago 04be498358447e4af649538f9305870b https://www.encodeproject.org/files/ENCFF000ZUE/@@download/ENCFF000ZUE.fastq.gz Illumina Genome Analyzer II /files/ENCFF000ZVL/ released missing genetic modification characterization, low read depth, low read length ENCFF001VRH bed narrowPeak peaks ENCSR000DKB ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-FOS-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 489269 Kevin White, UChicago 2a6280868b59db45c28f4bd94ab6c9da https://www.encodeproject.org/files/ENCFF001VRH/@@download/ENCFF001VRH.bed.gz hg19 archived missing genetic modification characterization, low read depth, low read length missing derived_from ENCFF002DDV bed narrowPeak optimal idr thresholded peaks ENCSR000DKB ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-FOS-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 250059 ENCODE Consortium Analysis Working Group 16ff22fbb3e4d51c95e323ee69490a75 https://www.encodeproject.org/files/ENCFF002DDV/@@download/ENCFF002DDV.bed.gz hg19 archived missing genetic modification characterization, low read depth, low read length missing derived_from ENCFF422QVU bigBed narrowPeak optimal idr thresholded peaks ENCSR000DKB ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-FOS-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE ENCFF002DDV 570591 ENCODE Consortium 3c788793e0262cd8c35f6cced81dc4a6 https://www.encodeproject.org/files/ENCFF422QVU/@@download/ENCFF422QVU.bigBed hg19 archived missing genetic modification characterization, low read depth, low read length ENCFF652LPW bam unfiltered alignments ENCSR000DKB ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-FOS-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 3 36 ENCFF000ZUE, ENCFF643CGH 592806200 ENCODE Processing Pipeline ac2da0318d5e5ee506b3428de385620a https://www.encodeproject.org/files/ENCFF652LPW/@@download/ENCFF652LPW.bam GRCh38 released missing genetic modification characterization, low read depth, low read length ENCFF607RHS bam unfiltered alignments ENCSR000DKB ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-FOS-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 2 36 ENCFF000ZUD, ENCFF643CGH 776127624 ENCODE Processing Pipeline 36f89befdbb9b8304f4612da3198bde0 https://www.encodeproject.org/files/ENCFF607RHS/@@download/ENCFF607RHS.bam GRCh38 released missing genetic modification characterization, low read depth, low read length ENCFF011KDH bam alignments ENCSR000DKB ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-FOS-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 2 36 ENCFF000ZUD, ENCFF643CGH 546694625 ENCODE Processing Pipeline bbd51e313fe780e799f199c1db848fd2 https://www.encodeproject.org/files/ENCFF011KDH/@@download/ENCFF011KDH.bam GRCh38 released missing genetic modification characterization, low read depth, low read length ENCFF046GWZ bam alignments ENCSR000DKB ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-FOS-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 3 36 ENCFF000ZUE, ENCFF643CGH 418657558 ENCODE Processing Pipeline 4767e3bdd4d24d94721e130c28405717 https://www.encodeproject.org/files/ENCFF046GWZ/@@download/ENCFF046GWZ.bam GRCh38 released missing genetic modification characterization, low read depth, low read length ENCFF063VYC bam alignments ENCSR000DKB ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-FOS-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 1 36 ENCFF000ZTY, ENCFF643CGH 642232253 ENCODE Processing Pipeline 9883ef6fd60773e699a5688cc2a5acb0 https://www.encodeproject.org/files/ENCFF063VYC/@@download/ENCFF063VYC.bam GRCh38 released missing genetic modification characterization, low read depth, low read length ENCFF262BVH bam unfiltered alignments ENCSR000DKB ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-FOS-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 1 36 ENCFF000ZTY, ENCFF643CGH 1012075532 ENCODE Processing Pipeline 9d198e6a90198b228f69c59de9aff88e https://www.encodeproject.org/files/ENCFF262BVH/@@download/ENCFF262BVH.bam GRCh38 released missing genetic modification characterization, low read depth, low read length ENCFF290OSN bam unfiltered alignments ENCSR000DKB ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-FOS-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 3 36 ENCFF000ZUE, ENCFF807MUK 590762458 ENCODE Processing Pipeline 0ee2e7ed2b706dd0662edd1205923778 https://www.encodeproject.org/files/ENCFF290OSN/@@download/ENCFF290OSN.bam hg19 released missing genetic modification characterization, low read depth, low read length ENCFF306DQB bam alignments ENCSR000DKB ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-FOS-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 3 36 ENCFF000ZUE, ENCFF807MUK 419048608 ENCODE Processing Pipeline c6694cc4215dc975eda03818bddff2b8 https://www.encodeproject.org/files/ENCFF306DQB/@@download/ENCFF306DQB.bam hg19 released missing genetic modification characterization, low read depth, low read length ENCFF668PQX bam unfiltered alignments ENCSR000DKB ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-FOS-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 2 36 ENCFF000ZUD, ENCFF807MUK 772166790 ENCODE Processing Pipeline 5bacd7bdecc0c25938c4cf85e77939da https://www.encodeproject.org/files/ENCFF668PQX/@@download/ENCFF668PQX.bam hg19 released missing genetic modification characterization, low read depth, low read length ENCFF150EJD bam unfiltered alignments ENCSR000DKB ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-FOS-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 1 36 ENCFF000ZTY, ENCFF807MUK 1005789385 ENCODE Processing Pipeline d13855c598b151dcc4d50ed48c54b4f2 https://www.encodeproject.org/files/ENCFF150EJD/@@download/ENCFF150EJD.bam hg19 released missing genetic modification characterization, low read depth, low read length ENCFF827RTF bam alignments ENCSR000DKB ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-FOS-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 2 36 ENCFF000ZUD, ENCFF807MUK 547042958 ENCODE Processing Pipeline f64dc58542d7891b132d3429c7b9e8d8 https://www.encodeproject.org/files/ENCFF827RTF/@@download/ENCFF827RTF.bam hg19 released missing genetic modification characterization, low read depth, low read length ENCFF318ENI bam alignments ENCSR000DKB ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-FOS-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 1 36 ENCFF000ZTY, ENCFF807MUK 642284944 ENCODE Processing Pipeline 8baf2de228e432ac8a99ad32cf61a926 https://www.encodeproject.org/files/ENCFF318ENI/@@download/ENCFF318ENI.bam hg19 released missing genetic modification characterization, low read depth, low read length ENCFF000QDR bam alignments ENCSR000BGW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SPI1-human ENCAB000AKF DNA see document see document False 2011-07-18 ENCODE 1 ENCFF000QED 875197294 Richard Myers, HAIB ef21b521e42c859e84ff447bb3f84eb5 https://www.encodeproject.org/files/ENCFF000QDR/@@download/ENCFF000QDR.bam hg19 released low read length biological replicates with identical biosample ENCFF000QDS bigBed broadPeak peaks ENCSR000BGW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SPI1-human ENCAB000AKF DNA see document see document False 2011-07-18 ENCODE 1 1 ENCFF001UKV 1305127 Richard Myers, HAIB 0b3de43e71d56fd3cfe0336fd06f0fcb https://www.encodeproject.org/files/ENCFF000QDS/@@download/ENCFF000QDS.bigBed hg19 released low read length biological replicates with identical biosample ENCFF000QDT bigBed broadPeak peaks ENCSR000BGW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SPI1-human ENCAB000AKF DNA see document see document False 2011-07-18 ENCODE 2 1 ENCFF001UKW 678394 Richard Myers, HAIB 73fb864e41db742788412a111af0b32c https://www.encodeproject.org/files/ENCFF000QDT/@@download/ENCFF000QDT.bigBed hg19 released low read length biological replicates with identical biosample ENCFF000QDU bam alignments ENCSR000BGW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SPI1-human ENCAB000AKF DNA see document see document False 2011-07-18 ENCODE 2 ENCFF000QEG 785644626 Richard Myers, HAIB 80761bac7821da91c5c03caeed9fb513 https://www.encodeproject.org/files/ENCFF000QDU/@@download/ENCFF000QDU.bam hg19 released low read length biological replicates with identical biosample ENCFF000QDV bigWig raw signal ENCSR000BGW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SPI1-human ENCAB000AKF DNA see document see document False 2011-07-18 ENCODE 1 1 35169127 Richard Myers, HAIB a4cecbbe658dba5f3bec5e863e18ef35 https://www.encodeproject.org/files/ENCFF000QDV/@@download/ENCFF000QDV.bigWig hg19 released low read length biological replicates with identical biosample, missing derived_from ENCFF000QDW bigWig raw signal ENCSR000BGW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SPI1-human ENCAB000AKF DNA see document see document False 2011-07-18 ENCODE 2 1 18656037 Richard Myers, HAIB e6ad1bf4336097dbf8d2df48a7499da3 https://www.encodeproject.org/files/ENCFF000QDW/@@download/ENCFF000QDW.bigWig hg19 released low read length biological replicates with identical biosample, missing derived_from ENCFF000QED fastq reads ENCSR000BGW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SPI1-human ENCAB000AKF DNA see document see document False 2011-07-18 ENCODE 1 1 36 single-ended 1075409875 Richard Myers, HAIB 61b026659456a9b82e06be8ceb65260d https://www.encodeproject.org/files/ENCFF000QED/@@download/ENCFF000QED.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000QFS/ released inconsistent control read length, low read length biological replicates with identical biosample, mismatched status ENCFF000QEG fastq reads ENCSR000BGW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SPI1-human ENCAB000AKF DNA see document see document False 2011-07-18 ENCODE 2 1 36 single-ended 941200568 Richard Myers, HAIB 89a2afb6f28496547735c59db0a0999d https://www.encodeproject.org/files/ENCFF000QEG/@@download/ENCFF000QEG.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000QFL/ released low read length biological replicates with identical biosample ENCFF001UKV bed broadPeak peaks ENCSR000BGW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SPI1-human ENCAB000AKF DNA see document see document False 2011-07-18 ENCODE 1 1 790097 Richard Myers, HAIB 43594cd9473d6b3fdf24716a7218233d https://www.encodeproject.org/files/ENCFF001UKV/@@download/ENCFF001UKV.bed.gz hg19 released low read length biological replicates with identical biosample, missing derived_from ENCFF001UKW bed broadPeak peaks ENCSR000BGW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SPI1-human ENCAB000AKF DNA see document see document False 2011-07-18 ENCODE 2 1 369502 Richard Myers, HAIB b5883a071bb3179666ea345d29afd42e https://www.encodeproject.org/files/ENCFF001UKW/@@download/ENCFF001UKW.bed.gz hg19 released low read length biological replicates with identical biosample, missing derived_from ENCFF002CMJ bed narrowPeak optimal idr thresholded peaks ENCSR000BGW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SPI1-human ENCAB000AKF DNA see document see document False 2011-07-18 ENCODE 551112 ENCODE Consortium Analysis Working Group e5deb59ab10ad4f9cf73e327a1094fd3 https://www.encodeproject.org/files/ENCFF002CMJ/@@download/ENCFF002CMJ.bed.gz hg19 released low read length biological replicates with identical biosample, missing derived_from ENCFF136TIM bigBed narrowPeak optimal idr thresholded peaks ENCSR000BGW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SPI1-human ENCAB000AKF DNA see document see document False 2011-07-18 ENCODE ENCFF002CMJ 1015620 ENCODE Consortium 9152ed1ef14717a10356edfe1b347623 https://www.encodeproject.org/files/ENCFF136TIM/@@download/ENCFF136TIM.bigBed hg19 released low read length biological replicates with identical biosample ENCFF000QAP bam alignments ENCSR000BKM ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATA2-human ENCAB000AGW DNA see document see document False 2011-07-18 ENCODE 2 ENCFF000QBC 862481037 Richard Myers, HAIB e7aa139ba37ab1bd4a86f9a7af56f153 https://www.encodeproject.org/files/ENCFF000QAP/@@download/ENCFF000QAP.bam hg19 archived low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample ENCFF000QAR bigBed broadPeak peaks ENCSR000BKM ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATA2-human ENCAB000AGW DNA see document see document False 2011-07-18 ENCODE 1 1 ENCFF001UKB 887015 Richard Myers, HAIB 69458d751dc7694d538d8dc32f7485ad https://www.encodeproject.org/files/ENCFF000QAR/@@download/ENCFF000QAR.bigBed hg19 archived low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample ENCFF000QAS bigBed broadPeak peaks ENCSR000BKM ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATA2-human ENCAB000AGW DNA see document see document False 2011-07-18 ENCODE 2 1 ENCFF001UKC 209095 Richard Myers, HAIB f49d97e233c4ba70dfe00f280c09476a https://www.encodeproject.org/files/ENCFF000QAS/@@download/ENCFF000QAS.bigBed hg19 archived low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample ENCFF000QAT bam alignments ENCSR000BKM ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATA2-human ENCAB000AGW DNA see document see document False 2011-07-18 ENCODE 1 ENCFF000QBD 1247515080 Richard Myers, HAIB 353602bc2f4d679e00d7e7870083e634 https://www.encodeproject.org/files/ENCFF000QAT/@@download/ENCFF000QAT.bam hg19 archived low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample ENCFF000QAU bigWig raw signal ENCSR000BKM ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATA2-human ENCAB000AGW DNA see document see document False 2011-07-18 ENCODE 1 1 38885185 Richard Myers, HAIB 2dd5a4df80f7b5f1e8b0d7d294b1d319 https://www.encodeproject.org/files/ENCFF000QAU/@@download/ENCFF000QAU.bigWig hg19 archived low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample, missing derived_from ENCFF000QAW bigWig raw signal ENCSR000BKM ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATA2-human ENCAB000AGW DNA see document see document False 2011-07-18 ENCODE 2 1 10931254 Richard Myers, HAIB dad476e93db761458380556b5c0729a6 https://www.encodeproject.org/files/ENCFF000QAW/@@download/ENCFF000QAW.bigWig hg19 archived low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample, missing derived_from ENCFF000QBC fastq reads ENCSR000BKM ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATA2-human ENCAB000AGW DNA see document see document False 2011-07-18 ENCODE 2 1 36 single-ended 742573761 Richard Myers, HAIB 2c17a0d8ab6ae95ee6b8c7af3140b83b https://www.encodeproject.org/files/ENCFF000QBC/@@download/ENCFF000QBC.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000QEX/ released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample ENCFF000QBD fastq reads ENCSR000BKM ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATA2-human ENCAB000AGW DNA see document see document False 2011-07-18 ENCODE 1 1 36 single-ended 791299306 Richard Myers, HAIB a928f1161897dbe02b795eb730abe432 https://www.encodeproject.org/files/ENCFF000QBD/@@download/ENCFF000QBD.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000QEX/ released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample ENCFF001UKB bed broadPeak peaks ENCSR000BKM ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATA2-human ENCAB000AGW DNA see document see document False 2011-07-18 ENCODE 1 1 442690 Richard Myers, HAIB 225185918723bead1dda3a122d6a3f9e https://www.encodeproject.org/files/ENCFF001UKB/@@download/ENCFF001UKB.bed.gz hg19 archived low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample, missing derived_from ENCFF001UKC bed broadPeak peaks ENCSR000BKM ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATA2-human ENCAB000AGW DNA see document see document False 2011-07-18 ENCODE 2 1 100100 Richard Myers, HAIB bad8ed68969025f83130e7a22950fbb6 https://www.encodeproject.org/files/ENCFF001UKC/@@download/ENCFF001UKC.bed.gz hg19 archived low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample, missing derived_from ENCFF002CMA bed narrowPeak optimal idr thresholded peaks ENCSR000BKM ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATA2-human ENCAB000AGW DNA see document see document False 2011-07-18 ENCODE 379332 ENCODE Consortium Analysis Working Group 375a3d9a300928e6b93f233463063ae9 https://www.encodeproject.org/files/ENCFF002CMA/@@download/ENCFF002CMA.bed.gz hg19 archived low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample, missing derived_from ENCFF077XMB bigBed narrowPeak optimal idr thresholded peaks ENCSR000BKM ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATA2-human ENCAB000AGW DNA see document see document False 2011-07-18 ENCODE ENCFF002CMA 884285 ENCODE Consortium f5ccf924f8c0a888a61eedaca91e301e https://www.encodeproject.org/files/ENCFF077XMB/@@download/ENCFF077XMB.bigBed hg19 archived low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample ENCFF414LJV bam unfiltered alignments ENCSR000BKM ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATA2-human ENCAB000AGW DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000QBC, ENCFF643CGH 1036605365 ENCODE Processing Pipeline 7571ef70e65125eae5fcacc8cdc34c46 https://www.encodeproject.org/files/ENCFF414LJV/@@download/ENCFF414LJV.bam GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample ENCFF257ZRY bam alignments ENCSR000BKM ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATA2-human ENCAB000AGW DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000QBC, ENCFF643CGH 564622760 ENCODE Processing Pipeline 35277a3c01f4520c1f8352ae32f8ad37 https://www.encodeproject.org/files/ENCFF257ZRY/@@download/ENCFF257ZRY.bam GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample ENCFF541TGX bam unfiltered alignments ENCSR000BKM ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATA2-human ENCAB000AGW DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000QBD, ENCFF643CGH 1115695714 ENCODE Processing Pipeline 241a2c46471fa73d0bdfb14c97b70746 https://www.encodeproject.org/files/ENCFF541TGX/@@download/ENCFF541TGX.bam GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample ENCFF828HPM bam alignments ENCSR000BKM ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATA2-human ENCAB000AGW DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000QBD, ENCFF643CGH 685209719 ENCODE Processing Pipeline a48f0be8ffe98c003f560e6a386e8253 https://www.encodeproject.org/files/ENCFF828HPM/@@download/ENCFF828HPM.bam GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample ENCFF357QQD bam unfiltered alignments ENCSR000BKM ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATA2-human ENCAB000AGW DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000QBC, ENCFF807MUK 1031947994 ENCODE Processing Pipeline 644a336ae669ac6f575836e9dc895a8d https://www.encodeproject.org/files/ENCFF357QQD/@@download/ENCFF357QQD.bam hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample ENCFF808ASG bam alignments ENCSR000BKM ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATA2-human ENCAB000AGW DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000QBC, ENCFF807MUK 564981278 ENCODE Processing Pipeline c5c96a9fda25fb5d213007f67ba867ef https://www.encodeproject.org/files/ENCFF808ASG/@@download/ENCFF808ASG.bam hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample ENCFF974OQB bam unfiltered alignments ENCSR000BKM ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATA2-human ENCAB000AGW DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000QBD, ENCFF807MUK 1112924966 ENCODE Processing Pipeline 6bb811c3629e647039c1f8e4f981a0b4 https://www.encodeproject.org/files/ENCFF974OQB/@@download/ENCFF974OQB.bam hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample ENCFF135BZT bam alignments ENCSR000BKM ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATA2-human ENCAB000AGW DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000QBD, ENCFF807MUK 685509998 ENCODE Processing Pipeline 7779e237830219953dae2be6f9056315 https://www.encodeproject.org/files/ENCFF135BZT/@@download/ENCFF135BZT.bam hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample ENCFF000YVE bam alignments ENCSR000EHH ChIP-seq EFO:0002067 K562 cell line Homo sapiens NRF1-human ENCAB000AJI DNA see document see document False 2011-10-29 ENCODE 1 ENCFF000YWC 377760951 Michael Snyder, Stanford cafa6889e662a532c090235f4b1c8316 https://www.encodeproject.org/files/ENCFF000YVE/@@download/ENCFF000YVE.bam hg19 archived low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample ENCFF000YVF bigBed narrowPeak peaks ENCSR000EHH ChIP-seq EFO:0002067 K562 cell line Homo sapiens NRF1-human ENCAB000AJI DNA see document see document False 2011-10-29 ENCODE ENCFF001VOA 383960 Michael Snyder, Stanford 172a620b1124651ae3cdbebb65c846ef https://www.encodeproject.org/files/ENCFF000YVF/@@download/ENCFF000YVF.bigBed hg19 archived low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample ENCFF000YVG bam alignments ENCSR000EHH ChIP-seq EFO:0002067 K562 cell line Homo sapiens NRF1-human ENCAB000AJI DNA see document see document False 2011-10-29 ENCODE 2 ENCFF000YVU 351106457 Michael Snyder, Stanford 7fd3ad0afbeb3dc450abf75d886738f2 https://www.encodeproject.org/files/ENCFF000YVG/@@download/ENCFF000YVG.bam hg19 archived low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample ENCFF000YVI bigWig signal ENCSR000EHH ChIP-seq EFO:0002067 K562 cell line Homo sapiens NRF1-human ENCAB000AJI DNA see document see document False 2011-10-29 ENCODE 400664071 Michael Snyder, Stanford 9b30f7e0f0980c889b416dbd9a38f59b https://www.encodeproject.org/files/ENCFF000YVI/@@download/ENCFF000YVI.bigWig hg19 archived low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample, missing derived_from ENCFF000YVU fastq reads ENCSR000EHH ChIP-seq EFO:0002067 K562 cell line Homo sapiens NRF1-human ENCAB000AJI DNA see document see document False 2011-10-29 ENCODE 2 1 36 single-ended 932650646 Michael Snyder, Stanford c9feed863d3ca8883887a0cf57110c6f https://www.encodeproject.org/files/ENCFF000YVU/@@download/ENCFF000YVU.fastq.gz Illumina Genome Analyzer /files/ENCFF000YRB/ released low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample ENCFF000YWC fastq reads ENCSR000EHH ChIP-seq EFO:0002067 K562 cell line Homo sapiens NRF1-human ENCAB000AJI DNA see document see document False 2011-10-29 ENCODE 1 1 36 single-ended 1087127946 Michael Snyder, Stanford acc39e61c06ca48e6896a31fed9a5e6c https://www.encodeproject.org/files/ENCFF000YWC/@@download/ENCFF000YWC.fastq.gz Illumina Genome Analyzer /files/ENCFF000YRB/ released low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample ENCFF001VOA bed narrowPeak peaks ENCSR000EHH ChIP-seq EFO:0002067 K562 cell line Homo sapiens NRF1-human ENCAB000AJI DNA see document see document False 2011-10-29 ENCODE 153955 Michael Snyder, Stanford 133a4cc0e03b29a4e74f205c43065d81 https://www.encodeproject.org/files/ENCFF001VOA/@@download/ENCFF001VOA.bed.gz hg19 archived low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample, missing derived_from ENCFF002CXK bed narrowPeak optimal idr thresholded peaks ENCSR000EHH ChIP-seq EFO:0002067 K562 cell line Homo sapiens NRF1-human ENCAB000AJI DNA see document see document False 2011-10-29 ENCODE 109592 ENCODE Consortium Analysis Working Group c8f1ed8026f89575c0dd034a4de3974c https://www.encodeproject.org/files/ENCFF002CXK/@@download/ENCFF002CXK.bed.gz hg19 archived low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample, missing derived_from ENCFF235YON bigBed narrowPeak optimal idr thresholded peaks ENCSR000EHH ChIP-seq EFO:0002067 K562 cell line Homo sapiens NRF1-human ENCAB000AJI DNA see document see document False 2011-10-29 ENCODE ENCFF002CXK 349976 ENCODE Consortium 5c2b74d2698bbbd07e58ce6ba91834f7 https://www.encodeproject.org/files/ENCFF235YON/@@download/ENCFF235YON.bigBed hg19 archived low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample ENCFF733NCK bam unfiltered alignments ENCSR000EHH ChIP-seq EFO:0002067 K562 cell line Homo sapiens NRF1-human ENCAB000AJI DNA see document see document False 2011-10-29 ENCODE 1 36 ENCFF000YWC, ENCFF643CGH 1268502793 ENCODE Processing Pipeline 03384a1c7ab2eac9aa97ddb53b398afd https://www.encodeproject.org/files/ENCFF733NCK/@@download/ENCFF733NCK.bam GRCh38 released low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample ENCFF084WSP bam alignments ENCSR000EHH ChIP-seq EFO:0002067 K562 cell line Homo sapiens NRF1-human ENCAB000AJI DNA see document see document False 2011-10-29 ENCODE 1 36 ENCFF000YWC, ENCFF643CGH 704159272 ENCODE Processing Pipeline 4928406c6301415018d577ac3b64c946 https://www.encodeproject.org/files/ENCFF084WSP/@@download/ENCFF084WSP.bam GRCh38 released low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample ENCFF922ZMC bam unfiltered alignments ENCSR000EHH ChIP-seq EFO:0002067 K562 cell line Homo sapiens NRF1-human ENCAB000AJI DNA see document see document False 2011-10-29 ENCODE 1 36 ENCFF000YWC, ENCFF807MUK 1263002371 ENCODE Processing Pipeline fb6ecb85d273df690be1634367747aa4 https://www.encodeproject.org/files/ENCFF922ZMC/@@download/ENCFF922ZMC.bam hg19 released low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample ENCFF674LRE bam alignments ENCSR000EHH ChIP-seq EFO:0002067 K562 cell line Homo sapiens NRF1-human ENCAB000AJI DNA see document see document False 2011-10-29 ENCODE 1 36 ENCFF000YWC, ENCFF807MUK 704606281 ENCODE Processing Pipeline 7b3f0134348a5e22f672f657ace9bd78 https://www.encodeproject.org/files/ENCFF674LRE/@@download/ENCFF674LRE.bam hg19 released low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample ENCFF000QGI bam alignments ENCSR000BKO ChIP-seq EFO:0002067 K562 cell line Homo sapiens SP1-human ENCAB000AKY DNA see document see document False 2011-07-18 ENCODE 1 ENCFF000QGV 691204017 Richard Myers, HAIB 458ba01acd0efcf244f41a8a3dacd0b7 https://www.encodeproject.org/files/ENCFF000QGI/@@download/ENCFF000QGI.bam hg19 archived low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample ENCFF000QGK bigBed broadPeak peaks ENCSR000BKO ChIP-seq EFO:0002067 K562 cell line Homo sapiens SP1-human ENCAB000AKY DNA see document see document False 2011-07-18 ENCODE 1 1 ENCFF001ULF 111901 Richard Myers, HAIB c5c317b5c7db02c117efb0fa1a1c39b3 https://www.encodeproject.org/files/ENCFF000QGK/@@download/ENCFF000QGK.bigBed hg19 archived low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample ENCFF000QGL bigBed broadPeak peaks ENCSR000BKO ChIP-seq EFO:0002067 K562 cell line Homo sapiens SP1-human ENCAB000AKY DNA see document see document False 2011-07-18 ENCODE 2 1 ENCFF001ULG 224233 Richard Myers, HAIB 78ad45e4a570110d9c61e7bc6d91e181 https://www.encodeproject.org/files/ENCFF000QGL/@@download/ENCFF000QGL.bigBed hg19 archived low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample ENCFF000QGM bam alignments ENCSR000BKO ChIP-seq EFO:0002067 K562 cell line Homo sapiens SP1-human ENCAB000AKY DNA see document see document False 2011-07-18 ENCODE 2 ENCFF000QGW 876729297 Richard Myers, HAIB 13f36813d48c4bf3835f62725d5c180b https://www.encodeproject.org/files/ENCFF000QGM/@@download/ENCFF000QGM.bam hg19 archived low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample ENCFF000QGO bigWig raw signal ENCSR000BKO ChIP-seq EFO:0002067 K562 cell line Homo sapiens SP1-human ENCAB000AKY DNA see document see document False 2011-07-18 ENCODE 1 1 2925159 Richard Myers, HAIB 6c8fd03d97423226af68c43c73a56835 https://www.encodeproject.org/files/ENCFF000QGO/@@download/ENCFF000QGO.bigWig hg19 archived low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample, missing derived_from ENCFF000QGP bigWig raw signal ENCSR000BKO ChIP-seq EFO:0002067 K562 cell line Homo sapiens SP1-human ENCAB000AKY DNA see document see document False 2011-07-18 ENCODE 2 1 6381695 Richard Myers, HAIB 6ca843495beb775b8f4ad0913fe7be3c https://www.encodeproject.org/files/ENCFF000QGP/@@download/ENCFF000QGP.bigWig hg19 archived low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample, missing derived_from ENCFF000QGV fastq reads ENCSR000BKO ChIP-seq EFO:0002067 K562 cell line Homo sapiens SP1-human ENCAB000AKY DNA see document see document False 2011-07-18 ENCODE 1 1 36 single-ended 687719993 Richard Myers, HAIB b9700dac4e8cd2d19f177161f9dd2810 https://www.encodeproject.org/files/ENCFF000QGV/@@download/ENCFF000QGV.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000QEX/ released low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample ENCFF000QGW fastq reads ENCSR000BKO ChIP-seq EFO:0002067 K562 cell line Homo sapiens SP1-human ENCAB000AKY DNA see document see document False 2011-07-18 ENCODE 2 1 36 single-ended 632834537 Richard Myers, HAIB ccfa5f10abeb32f9bc83c84d6127b0a3 https://www.encodeproject.org/files/ENCFF000QGW/@@download/ENCFF000QGW.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000QEX/ released low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample ENCFF001ULF bed broadPeak peaks ENCSR000BKO ChIP-seq EFO:0002067 K562 cell line Homo sapiens SP1-human ENCAB000AKY DNA see document see document False 2011-07-18 ENCODE 1 1 31705 Richard Myers, HAIB 29393027b3b5b914b11b96034fa3dba0 https://www.encodeproject.org/files/ENCFF001ULF/@@download/ENCFF001ULF.bed.gz hg19 archived low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample, missing derived_from ENCFF001ULG bed broadPeak peaks ENCSR000BKO ChIP-seq EFO:0002067 K562 cell line Homo sapiens SP1-human ENCAB000AKY DNA see document see document False 2011-07-18 ENCODE 2 1 90215 Richard Myers, HAIB ad851c73824ddfb8893b9f571c95c898 https://www.encodeproject.org/files/ENCFF001ULG/@@download/ENCFF001ULG.bed.gz hg19 archived low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample, missing derived_from ENCFF002CMN bed narrowPeak optimal idr thresholded peaks ENCSR000BKO ChIP-seq EFO:0002067 K562 cell line Homo sapiens SP1-human ENCAB000AKY DNA see document see document False 2011-07-18 ENCODE 175388 ENCODE Consortium Analysis Working Group ab813cc65787acdb2cdfafcb9522367a https://www.encodeproject.org/files/ENCFF002CMN/@@download/ENCFF002CMN.bed.gz hg19 archived low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample, missing derived_from ENCFF585IXS bigBed narrowPeak optimal idr thresholded peaks ENCSR000BKO ChIP-seq EFO:0002067 K562 cell line Homo sapiens SP1-human ENCAB000AKY DNA see document see document False 2011-07-18 ENCODE ENCFF002CMN 432666 ENCODE Consortium 65e8612acf6d46955e7415e30b25934e https://www.encodeproject.org/files/ENCFF585IXS/@@download/ENCFF585IXS.bigBed hg19 archived low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample ENCFF045AXI bam alignments ENCSR000BKO ChIP-seq EFO:0002067 K562 cell line Homo sapiens SP1-human ENCAB000AKY DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000QGV, ENCFF643CGH 546629054 ENCODE Processing Pipeline feb682b8d51394408649f56f76ecf7eb https://www.encodeproject.org/files/ENCFF045AXI/@@download/ENCFF045AXI.bam GRCh38 released low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample ENCFF700VDE bam unfiltered alignments ENCSR000BKO ChIP-seq EFO:0002067 K562 cell line Homo sapiens SP1-human ENCAB000AKY DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000QGV, ENCFF643CGH 912101927 ENCODE Processing Pipeline 9e7eb09e1e3d5a87f4c271f9d95b13e5 https://www.encodeproject.org/files/ENCFF700VDE/@@download/ENCFF700VDE.bam GRCh38 released low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample ENCFF714DJL bam unfiltered alignments ENCSR000BKO ChIP-seq EFO:0002067 K562 cell line Homo sapiens SP1-human ENCAB000AKY DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000QGW, ENCFF643CGH 932461559 ENCODE Processing Pipeline 9839e91c138c740f23b826d37cb7ea94 https://www.encodeproject.org/files/ENCFF714DJL/@@download/ENCFF714DJL.bam GRCh38 released low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample ENCFF595HJO bam alignments ENCSR000BKO ChIP-seq EFO:0002067 K562 cell line Homo sapiens SP1-human ENCAB000AKY DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000QGW, ENCFF643CGH 602438714 ENCODE Processing Pipeline 553e7d8a5b57f666cb29b0f29f2bf127 https://www.encodeproject.org/files/ENCFF595HJO/@@download/ENCFF595HJO.bam GRCh38 released low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample ENCFF593LCA bam alignments ENCSR000BKO ChIP-seq EFO:0002067 K562 cell line Homo sapiens SP1-human ENCAB000AKY DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000QGV, ENCFF807MUK 546886339 ENCODE Processing Pipeline 6577bd00fefff0a62ee9a510a99e2ea4 https://www.encodeproject.org/files/ENCFF593LCA/@@download/ENCFF593LCA.bam hg19 released low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample ENCFF797MCR bam unfiltered alignments ENCSR000BKO ChIP-seq EFO:0002067 K562 cell line Homo sapiens SP1-human ENCAB000AKY DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000QGV, ENCFF807MUK 909285709 ENCODE Processing Pipeline 4a51e062808139e3012589f4fda6206c https://www.encodeproject.org/files/ENCFF797MCR/@@download/ENCFF797MCR.bam hg19 released low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample ENCFF515QZM bam alignments ENCSR000BKO ChIP-seq EFO:0002067 K562 cell line Homo sapiens SP1-human ENCAB000AKY DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000QGW, ENCFF807MUK 602686300 ENCODE Processing Pipeline 23929c18ba02142c586d356f110d4422 https://www.encodeproject.org/files/ENCFF515QZM/@@download/ENCFF515QZM.bam hg19 released low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample ENCFF196UVO bam unfiltered alignments ENCSR000BKO ChIP-seq EFO:0002067 K562 cell line Homo sapiens SP1-human ENCAB000AKY DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000QGW, ENCFF807MUK 929051526 ENCODE Processing Pipeline 547400fee65ddd15cb23a919635188fb https://www.encodeproject.org/files/ENCFF196UVO/@@download/ENCFF196UVO.bam hg19 released low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample ENCFF000ZUG bigBed narrowPeak peaks ENCSR000DJY ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-JUNB-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE ENCFF001VRK 1302709 Kevin White, UChicago 17b78e611672b37ec88d5b7526dc5d85 https://www.encodeproject.org/files/ENCFF000ZUG/@@download/ENCFF000ZUG.bigBed hg19 archived missing genetic modification characterization, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity insufficient read depth, severe bottlenecking ENCFF000ZUH bam alignments ENCSR000DJY ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-JUNB-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 442537743 Kevin White, UChicago a38c39c08215b20e614d1513c19e37dc https://www.encodeproject.org/files/ENCFF000ZUH/@@download/ENCFF000ZUH.bam hg19 archived missing genetic modification characterization, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity missing derived_from insufficient read depth, severe bottlenecking ENCFF000ZUI bigWig signal ENCSR000DJY ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-JUNB-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 292948496 Kevin White, UChicago 4836bef0a5d871a772c9fdfc36750e68 https://www.encodeproject.org/files/ENCFF000ZUI/@@download/ENCFF000ZUI.bigWig hg19 archived missing genetic modification characterization, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity missing derived_from insufficient read depth, severe bottlenecking ENCFF000ZUJ bam alignments ENCSR000DJY ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-JUNB-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 554198220 Kevin White, UChicago 6d0db067c5eda2b90a2d90313f7de084 https://www.encodeproject.org/files/ENCFF000ZUJ/@@download/ENCFF000ZUJ.bam hg19 archived missing genetic modification characterization, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity missing derived_from insufficient read depth, severe bottlenecking ENCFF000ZUQ fastq reads ENCSR000DJY ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-JUNB-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 1 1 36 single-ended 606209092 Kevin White, UChicago b06f28a6ced1a49d3503cb5bd76d31bb https://www.encodeproject.org/files/ENCFF000ZUQ/@@download/ENCFF000ZUQ.fastq.gz Illumina Genome Analyzer II /files/ENCFF000ZVJ/ released missing genetic modification characterization, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity insufficient read depth, severe bottlenecking ENCFF000ZUR fastq reads ENCSR000DJY ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-JUNB-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 2 1 36 single-ended 652914324 Kevin White, UChicago 5696c1df3c741e96ec730314f69c50a9 https://www.encodeproject.org/files/ENCFF000ZUR/@@download/ENCFF000ZUR.fastq.gz Illumina Genome Analyzer II /files/ENCFF000ZVZ/ released missing genetic modification characterization, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity insufficient read depth, severe bottlenecking ENCFF001VRK bed narrowPeak peaks ENCSR000DJY ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-JUNB-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 729683 Kevin White, UChicago 171e5b65d57537390e9e55accafb9afb https://www.encodeproject.org/files/ENCFF001VRK/@@download/ENCFF001VRK.bed.gz hg19 archived missing genetic modification characterization, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity missing derived_from insufficient read depth, severe bottlenecking ENCFF002DDY bed narrowPeak optimal idr thresholded peaks ENCSR000DJY ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-JUNB-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 273015 ENCODE Consortium Analysis Working Group d1ef04cbb500ad6a7e978a640b6e8b01 https://www.encodeproject.org/files/ENCFF002DDY/@@download/ENCFF002DDY.bed.gz hg19 archived missing genetic modification characterization, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity missing derived_from insufficient read depth, severe bottlenecking ENCFF879BFI bigBed narrowPeak optimal idr thresholded peaks ENCSR000DJY ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-JUNB-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE ENCFF002DDY 607394 ENCODE Consortium 75991e5a270fbb74fba5b094c4f79cb7 https://www.encodeproject.org/files/ENCFF879BFI/@@download/ENCFF879BFI.bigBed hg19 archived missing genetic modification characterization, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity insufficient read depth, severe bottlenecking ENCFF870BYJ bam unfiltered alignments ENCSR000DJY ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-JUNB-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 1 36 ENCFF000ZUQ, ENCFF643CGH 666828429 ENCODE Processing Pipeline 1ae75bc934118d4d0ac0c7a6a23d3a41 https://www.encodeproject.org/files/ENCFF870BYJ/@@download/ENCFF870BYJ.bam GRCh38 released missing genetic modification characterization, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity insufficient read depth, severe bottlenecking ENCFF723OFY bam alignments ENCSR000DJY ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-JUNB-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 1 36 ENCFF000ZUQ, ENCFF643CGH 295768729 ENCODE Processing Pipeline 08d33c56762746cee0163df95e553ffb https://www.encodeproject.org/files/ENCFF723OFY/@@download/ENCFF723OFY.bam GRCh38 released missing genetic modification characterization, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity insufficient read depth, severe bottlenecking ENCFF104SNU bam unfiltered alignments ENCSR000DJY ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-JUNB-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 2 36 ENCFF000ZUR, ENCFF643CGH 809568026 ENCODE Processing Pipeline 30e4baf8021a9bdfd7d70fc901ca4f31 https://www.encodeproject.org/files/ENCFF104SNU/@@download/ENCFF104SNU.bam GRCh38 released missing genetic modification characterization, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity insufficient read depth, severe bottlenecking ENCFF827JRA bam alignments ENCSR000DJY ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-JUNB-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 2 36 ENCFF000ZUR, ENCFF643CGH 576973903 ENCODE Processing Pipeline ab40c1c124019e4f12b3f06b18e6d564 https://www.encodeproject.org/files/ENCFF827JRA/@@download/ENCFF827JRA.bam GRCh38 released missing genetic modification characterization, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity insufficient read depth, severe bottlenecking ENCFF999MCN bam alignments ENCSR000DJY ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-JUNB-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 1 36 ENCFF000ZUQ, ENCFF807MUK 296000255 ENCODE Processing Pipeline 9b12cf1b5f9c7e5d97a50daccb7f83b0 https://www.encodeproject.org/files/ENCFF999MCN/@@download/ENCFF999MCN.bam hg19 released missing genetic modification characterization, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity insufficient read depth, severe bottlenecking ENCFF430UDI bam unfiltered alignments ENCSR000DJY ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-JUNB-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 2 36 ENCFF000ZUR, ENCFF807MUK 805731314 ENCODE Processing Pipeline c08dac1677779fedf81e8f7adaa5749e https://www.encodeproject.org/files/ENCFF430UDI/@@download/ENCFF430UDI.bam hg19 released missing genetic modification characterization, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity insufficient read depth, severe bottlenecking ENCFF486HVP bam unfiltered alignments ENCSR000DJY ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-JUNB-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 1 36 ENCFF000ZUQ, ENCFF807MUK 662569591 ENCODE Processing Pipeline 126c7a8113989465156b564046005ad1 https://www.encodeproject.org/files/ENCFF486HVP/@@download/ENCFF486HVP.bam hg19 released missing genetic modification characterization, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity insufficient read depth, severe bottlenecking ENCFF418UEC bam alignments ENCSR000DJY ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-JUNB-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 2 36 ENCFF000ZUR, ENCFF807MUK 577379356 ENCODE Processing Pipeline 1752ad7dc9bc46e32d22f86128969481 https://www.encodeproject.org/files/ENCFF418UEC/@@download/ENCFF418UEC.bam hg19 released missing genetic modification characterization, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity insufficient read depth, severe bottlenecking ENCFF000YVS bam alignments ENCSR000EGY ChIP-seq EFO:0002067 K562 cell line Homo sapiens EP300-human ENCAB000AJN DNA see document see document False 2011-10-29 ENCODE 1 ENCFF000YWT 399091385 Michael Snyder, Stanford a6b05bb8fb85bc846551b1c20d6edbf2 https://www.encodeproject.org/files/ENCFF000YVS/@@download/ENCFF000YVS.bam hg19 archived low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample extremely low read depth ENCFF000YVT bam alignments ENCSR000EGY ChIP-seq EFO:0002067 K562 cell line Homo sapiens EP300-human ENCAB000AJN DNA see document see document False 2011-10-29 ENCODE 2 ENCFF000YWU 491250093 Michael Snyder, Stanford 3f0fc56bb14d7924ad44a5ed6f8126a0 https://www.encodeproject.org/files/ENCFF000YVT/@@download/ENCFF000YVT.bam hg19 archived low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample extremely low read depth ENCFF000YVW bigBed narrowPeak peaks ENCSR000EGY ChIP-seq EFO:0002067 K562 cell line Homo sapiens EP300-human ENCAB000AJN DNA see document see document False 2011-10-29 ENCODE ENCFF001VOB 702557 Michael Snyder, Stanford a9ee9c8044c68a7423678bab54c49d16 https://www.encodeproject.org/files/ENCFF000YVW/@@download/ENCFF000YVW.bigBed hg19 archived low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample extremely low read depth ENCFF000YVX bigWig signal ENCSR000EGY ChIP-seq EFO:0002067 K562 cell line Homo sapiens EP300-human ENCAB000AJN DNA see document see document False 2011-10-29 ENCODE 299413435 Michael Snyder, Stanford ef6983ae1dddb463f5bf79d2da56c091 https://www.encodeproject.org/files/ENCFF000YVX/@@download/ENCFF000YVX.bigWig hg19 archived low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample, missing derived_from extremely low read depth ENCFF000YWT fastq reads ENCSR000EGY ChIP-seq EFO:0002067 K562 cell line Homo sapiens EP300-human ENCAB000AJN DNA see document see document False 2011-10-29 ENCODE 1 1 36 single-ended 958435903 Michael Snyder, Stanford ce7d1f7d77ebe0c106ae7a671e811678 https://www.encodeproject.org/files/ENCFF000YWT/@@download/ENCFF000YWT.fastq.gz Illumina Genome Analyzer /files/ENCFF000YRB/ released low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample extremely low read depth ENCFF000YWU fastq reads ENCSR000EGY ChIP-seq EFO:0002067 K562 cell line Homo sapiens EP300-human ENCAB000AJN DNA see document see document False 2011-10-29 ENCODE 2 1 36 single-ended 1104283380 Michael Snyder, Stanford b405d046ef92cc4f9d94019d20f32f3e https://www.encodeproject.org/files/ENCFF000YWU/@@download/ENCFF000YWU.fastq.gz Illumina Genome Analyzer /files/ENCFF000YRB/ released low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample extremely low read depth ENCFF001VOB bed narrowPeak peaks ENCSR000EGY ChIP-seq EFO:0002067 K562 cell line Homo sapiens EP300-human ENCAB000AJN DNA see document see document False 2011-10-29 ENCODE 325346 Michael Snyder, Stanford 882d3a365a7eb97c3e086b11f094aa3a https://www.encodeproject.org/files/ENCFF001VOB/@@download/ENCFF001VOB.bed.gz hg19 archived low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample, missing derived_from extremely low read depth ENCFF708ZJO bam unfiltered alignments ENCSR000EGY ChIP-seq EFO:0002067 K562 cell line Homo sapiens EP300-human ENCAB000AJN DNA see document see document False 2011-10-29 ENCODE 1 36 ENCFF000YWT, ENCFF643CGH 910030199 ENCODE Processing Pipeline 03e07c0a3cff117e2c69a87d7e8d793c https://www.encodeproject.org/files/ENCFF708ZJO/@@download/ENCFF708ZJO.bam GRCh38 released low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample extremely low read depth ENCFF419COX bam alignments ENCSR000EGY ChIP-seq EFO:0002067 K562 cell line Homo sapiens EP300-human ENCAB000AJN DNA see document see document False 2011-10-29 ENCODE 1 36 ENCFF000YWT, ENCFF643CGH 11313776 ENCODE Processing Pipeline ea4ba0ef0df7c6b073899eee5333890a https://www.encodeproject.org/files/ENCFF419COX/@@download/ENCFF419COX.bam GRCh38 released low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample extremely low read depth ENCFF485LXI bam unfiltered alignments ENCSR000EGY ChIP-seq EFO:0002067 K562 cell line Homo sapiens EP300-human ENCAB000AJN DNA see document see document False 2011-10-29 ENCODE 2 36 ENCFF000YWU, ENCFF643CGH 1336479092 ENCODE Processing Pipeline 4532ba4917123aa1789f252e897b2990 https://www.encodeproject.org/files/ENCFF485LXI/@@download/ENCFF485LXI.bam GRCh38 released low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample extremely low read depth ENCFF362KLU bam alignments ENCSR000EGY ChIP-seq EFO:0002067 K562 cell line Homo sapiens EP300-human ENCAB000AJN DNA see document see document False 2011-10-29 ENCODE 2 36 ENCFF000YWU, ENCFF643CGH 796589694 ENCODE Processing Pipeline cd7e7e6d7d8cd372ba849844e71b4782 https://www.encodeproject.org/files/ENCFF362KLU/@@download/ENCFF362KLU.bam GRCh38 released low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample extremely low read depth ENCFF182YMO bam unfiltered alignments ENCSR000EGY ChIP-seq EFO:0002067 K562 cell line Homo sapiens EP300-human ENCAB000AJN DNA see document see document False 2011-10-29 ENCODE 1 36 ENCFF000YWT, ENCFF807MUK 908551006 ENCODE Processing Pipeline 1f5426f7e21cf960a49407068ac4603f https://www.encodeproject.org/files/ENCFF182YMO/@@download/ENCFF182YMO.bam hg19 released low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample extremely low read depth ENCFF424FHJ bam alignments ENCSR000EGY ChIP-seq EFO:0002067 K562 cell line Homo sapiens EP300-human ENCAB000AJN DNA see document see document False 2011-10-29 ENCODE 1 36 ENCFF000YWT, ENCFF807MUK 11285199 ENCODE Processing Pipeline 2a0818143ffe64487bab67fd9864eee1 https://www.encodeproject.org/files/ENCFF424FHJ/@@download/ENCFF424FHJ.bam hg19 released low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample extremely low read depth ENCFF763VHB bam unfiltered alignments ENCSR000EGY ChIP-seq EFO:0002067 K562 cell line Homo sapiens EP300-human ENCAB000AJN DNA see document see document False 2011-10-29 ENCODE 2 36 ENCFF000YWU, ENCFF807MUK 1330188126 ENCODE Processing Pipeline 67c0c7390b95bd20c4d683fd0c1a6536 https://www.encodeproject.org/files/ENCFF763VHB/@@download/ENCFF763VHB.bam hg19 released low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample extremely low read depth ENCFF330CRR bam alignments ENCSR000EGY ChIP-seq EFO:0002067 K562 cell line Homo sapiens EP300-human ENCAB000AJN DNA see document see document False 2011-10-29 ENCODE 2 36 ENCFF000YWU, ENCFF807MUK 797038869 ENCODE Processing Pipeline 3551e1374c68db65730f26fc1b691915 https://www.encodeproject.org/files/ENCFF330CRR/@@download/ENCFF330CRR.bam hg19 released low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample extremely low read depth ENCFF000PXL bigBed broadPeak peaks ENCSR000BSO ChIP-seq EFO:0002067 K562 cell line Homo sapiens CREB1-human ENCAB000AFN DNA see document see document False 2012-09-10 ENCODE 1 1 ENCFF001UJI 261217 Richard Myers, HAIB 7e6c97f766805e8cdd8b66d44a95be09 https://www.encodeproject.org/files/ENCFF000PXL/@@download/ENCFF000PXL.bigBed hg19 released inconsistent platforms biological replicates with identical biosample ENCFF000PXM bigBed broadPeak peaks ENCSR000BSO ChIP-seq EFO:0002067 K562 cell line Homo sapiens CREB1-human ENCAB000AFN DNA see document see document False 2012-09-10 ENCODE 2 1 ENCFF001UJJ 222448 Richard Myers, HAIB 0366f311ce5b830cefa7ed0c3b6c53a1 https://www.encodeproject.org/files/ENCFF000PXM/@@download/ENCFF000PXM.bigBed hg19 released inconsistent platforms biological replicates with identical biosample ENCFF000PXN bam alignments ENCSR000BSO ChIP-seq EFO:0002067 K562 cell line Homo sapiens CREB1-human ENCAB000AFN DNA see document see document False 2012-09-10 ENCODE 1 ENCFF000PXY 1491813857 Richard Myers, HAIB 26009d0c8d224772fd045f6aa974da63 https://www.encodeproject.org/files/ENCFF000PXN/@@download/ENCFF000PXN.bam hg19 released inconsistent platforms biological replicates with identical biosample ENCFF000PXO bam alignments ENCSR000BSO ChIP-seq EFO:0002067 K562 cell line Homo sapiens CREB1-human ENCAB000AFN DNA see document see document False 2012-09-10 ENCODE 2 ENCFF000PYC 2113540264 Richard Myers, HAIB a48153d9353437785570616f55bf6fa6 https://www.encodeproject.org/files/ENCFF000PXO/@@download/ENCFF000PXO.bam hg19 released inconsistent platforms biological replicates with identical biosample ENCFF000PXP bigWig raw signal ENCSR000BSO ChIP-seq EFO:0002067 K562 cell line Homo sapiens CREB1-human ENCAB000AFN DNA see document see document False 2012-09-10 ENCODE 1 1 242636654 Richard Myers, HAIB ba19a79ec7daccd167d35a2fd6734875 https://www.encodeproject.org/files/ENCFF000PXP/@@download/ENCFF000PXP.bigWig hg19 released inconsistent platforms biological replicates with identical biosample, missing derived_from ENCFF000PXQ bigWig raw signal ENCSR000BSO ChIP-seq EFO:0002067 K562 cell line Homo sapiens CREB1-human ENCAB000AFN DNA see document see document False 2012-09-10 ENCODE 2 1 294479058 Richard Myers, HAIB 766008b940066ce2da28b13bf1667f78 https://www.encodeproject.org/files/ENCFF000PXQ/@@download/ENCFF000PXQ.bigWig hg19 released inconsistent platforms biological replicates with identical biosample, missing derived_from ENCFF000PXY fastq reads ENCSR000BSO ChIP-seq EFO:0002067 K562 cell line Homo sapiens CREB1-human ENCAB000AFN DNA see document see document False 2012-09-10 ENCODE 1 1 50 single-ended 1563450354 Richard Myers, HAIB d19d5fb2f04463d674da08e4bfff9e39 https://www.encodeproject.org/files/ENCFF000PXY/@@download/ENCFF000PXY.fastq.gz Illumina HiSeq 2000 /files/ENCFF000QFK/ released inconsistent platforms biological replicates with identical biosample ENCFF000PYC fastq reads ENCSR000BSO ChIP-seq EFO:0002067 K562 cell line Homo sapiens CREB1-human ENCAB000AFN DNA see document see document False 2012-09-10 ENCODE 2 1 50 single-ended 2224625230 Richard Myers, HAIB 9822fa781bc9d890dd6e77b1d05fafb6 https://www.encodeproject.org/files/ENCFF000PYC/@@download/ENCFF000PYC.fastq.gz Illumina HiSeq 2000 /files/ENCFF000QFK/ released inconsistent platforms biological replicates with identical biosample ENCFF001UJI bed broadPeak peaks ENCSR000BSO ChIP-seq EFO:0002067 K562 cell line Homo sapiens CREB1-human ENCAB000AFN DNA see document see document False 2012-09-10 ENCODE 1 1 114887 Richard Myers, HAIB e6bdf4296b24f043e3551037f7218c64 https://www.encodeproject.org/files/ENCFF001UJI/@@download/ENCFF001UJI.bed.gz hg19 released inconsistent platforms biological replicates with identical biosample, missing derived_from ENCFF001UJJ bed broadPeak peaks ENCSR000BSO ChIP-seq EFO:0002067 K562 cell line Homo sapiens CREB1-human ENCAB000AFN DNA see document see document False 2012-09-10 ENCODE 2 1 91869 Richard Myers, HAIB 53b3fcfde7c54c7df5b41bac49ef48a2 https://www.encodeproject.org/files/ENCFF001UJJ/@@download/ENCFF001UJJ.bed.gz hg19 released inconsistent platforms biological replicates with identical biosample, missing derived_from ENCFF000YIJ bigBed narrowPeak peaks ENCSR000EHD ChIP-seq EFO:0002067 K562 cell line Homo sapiens CHD2-human ENCAB000AFG DNA see document see document False 2011-10-29 ENCODE ENCFF001VMJ 1625350 Michael Snyder, Stanford c7e4ba802fd56333841004471c91cd43 https://www.encodeproject.org/files/ENCFF000YIJ/@@download/ENCFF000YIJ.bigBed hg19 archived low read depth, low read length biological replicates with identical biosample ENCFF000YIK bam alignments ENCSR000EHD ChIP-seq EFO:0002067 K562 cell line Homo sapiens CHD2-human ENCAB000AFG DNA see document see document False 2011-10-29 ENCODE 1 ENCFF000YJT 407202760 Michael Snyder, Stanford 0ad9220c7bc0ce9354aebb674d068189 https://www.encodeproject.org/files/ENCFF000YIK/@@download/ENCFF000YIK.bam hg19 archived low read depth, low read length biological replicates with identical biosample ENCFF000YIL bigWig signal ENCSR000EHD ChIP-seq EFO:0002067 K562 cell line Homo sapiens CHD2-human ENCAB000AFG DNA see document see document False 2011-10-29 ENCODE 297624322 Michael Snyder, Stanford bf94c60bacb22d3b8147e5dd46a2c48a https://www.encodeproject.org/files/ENCFF000YIL/@@download/ENCFF000YIL.bigWig hg19 archived low read depth, low read length biological replicates with identical biosample, missing derived_from ENCFF000YIM bam alignments ENCSR000EHD ChIP-seq EFO:0002067 K562 cell line Homo sapiens CHD2-human ENCAB000AFG DNA see document see document False 2011-10-29 ENCODE 2 ENCFF000YJU 418656920 Michael Snyder, Stanford fc992c8931aae1b1d9c26bb83caab71a https://www.encodeproject.org/files/ENCFF000YIM/@@download/ENCFF000YIM.bam hg19 archived low read depth, low read length biological replicates with identical biosample ENCFF000YJT fastq reads ENCSR000EHD ChIP-seq EFO:0002067 K562 cell line Homo sapiens CHD2-human ENCAB000AFG DNA see document see document False 2011-10-29 ENCODE 1 1 36 single-ended 787206161 Michael Snyder, Stanford 2b90b14f7144fe8247fd64cce9bffbe0 https://www.encodeproject.org/files/ENCFF000YJT/@@download/ENCFF000YJT.fastq.gz Illumina Genome Analyzer /files/ENCFF000YRB/ released low read depth, low read length biological replicates with identical biosample ENCFF000YJU fastq reads ENCSR000EHD ChIP-seq EFO:0002067 K562 cell line Homo sapiens CHD2-human ENCAB000AFG DNA see document see document False 2011-10-29 ENCODE 2 1 36 single-ended 787448132 Michael Snyder, Stanford 6b5914e5375e1d10ff7a7fa6069ebd9e https://www.encodeproject.org/files/ENCFF000YJU/@@download/ENCFF000YJU.fastq.gz Illumina Genome Analyzer /files/ENCFF000YRB/ released low read depth, low read length biological replicates with identical biosample ENCFF001VMJ bed narrowPeak peaks ENCSR000EHD ChIP-seq EFO:0002067 K562 cell line Homo sapiens CHD2-human ENCAB000AFG DNA see document see document False 2011-10-29 ENCODE 612152 Michael Snyder, Stanford 5b5757e2837959b2d31e866c7b1c9474 https://www.encodeproject.org/files/ENCFF001VMJ/@@download/ENCFF001VMJ.bed.gz hg19 archived low read depth, low read length biological replicates with identical biosample, missing derived_from ENCFF002CVX bed narrowPeak optimal idr thresholded peaks ENCSR000EHD ChIP-seq EFO:0002067 K562 cell line Homo sapiens CHD2-human ENCAB000AFG DNA see document see document False 2011-10-29 ENCODE 180740 ENCODE Consortium Analysis Working Group fb1dfe8e79debff8a8c980ed02b6612a https://www.encodeproject.org/files/ENCFF002CVX/@@download/ENCFF002CVX.bed.gz hg19 archived low read depth, low read length biological replicates with identical biosample, missing derived_from ENCFF144HFE bigBed narrowPeak optimal idr thresholded peaks ENCSR000EHD ChIP-seq EFO:0002067 K562 cell line Homo sapiens CHD2-human ENCAB000AFG DNA see document see document False 2011-10-29 ENCODE ENCFF002CVX 453899 ENCODE Consortium b50eb07ee7315b83d0fece58a7cc0f88 https://www.encodeproject.org/files/ENCFF144HFE/@@download/ENCFF144HFE.bigBed hg19 archived low read depth, low read length biological replicates with identical biosample ENCFF072EPY bam unfiltered alignments ENCSR000EHD ChIP-seq EFO:0002067 K562 cell line Homo sapiens CHD2-human ENCAB000AFG DNA see document see document False 2011-10-29 ENCODE 1 36 ENCFF000YJT, ENCFF643CGH 966964902 ENCODE Processing Pipeline c3c65697619671e0a7ec5284e06d3193 https://www.encodeproject.org/files/ENCFF072EPY/@@download/ENCFF072EPY.bam GRCh38 released low read depth, low read length biological replicates with identical biosample ENCFF699ZAV bam alignments ENCSR000EHD ChIP-seq EFO:0002067 K562 cell line Homo sapiens CHD2-human ENCAB000AFG DNA see document see document False 2011-10-29 ENCODE 1 36 ENCFF000YJT, ENCFF643CGH 631692039 ENCODE Processing Pipeline ae71c40ab67e38ff791d3647d0c9a1a1 https://www.encodeproject.org/files/ENCFF699ZAV/@@download/ENCFF699ZAV.bam GRCh38 released low read depth, low read length biological replicates with identical biosample ENCFF790ZVP bam unfiltered alignments ENCSR000EHD ChIP-seq EFO:0002067 K562 cell line Homo sapiens CHD2-human ENCAB000AFG DNA see document see document False 2011-10-29 ENCODE 2 36 ENCFF000YJU, ENCFF643CGH 982934250 ENCODE Processing Pipeline ce233df35df292c4c350a02767bfcf89 https://www.encodeproject.org/files/ENCFF790ZVP/@@download/ENCFF790ZVP.bam GRCh38 released low read depth, low read length biological replicates with identical biosample ENCFF304KIE bam alignments ENCSR000EHD ChIP-seq EFO:0002067 K562 cell line Homo sapiens CHD2-human ENCAB000AFG DNA see document see document False 2011-10-29 ENCODE 2 36 ENCFF000YJU, ENCFF643CGH 656236668 ENCODE Processing Pipeline 3715f29279543d7b0469085431d24f7e https://www.encodeproject.org/files/ENCFF304KIE/@@download/ENCFF304KIE.bam GRCh38 released low read depth, low read length biological replicates with identical biosample ENCFF009AWH bam unfiltered alignments ENCSR000EHD ChIP-seq EFO:0002067 K562 cell line Homo sapiens CHD2-human ENCAB000AFG DNA see document see document False 2011-10-29 ENCODE 2 36 ENCFF000YJU, ENCFF807MUK 978483376 ENCODE Processing Pipeline 47e0aa04ba7661791f0bbb1b33c99573 https://www.encodeproject.org/files/ENCFF009AWH/@@download/ENCFF009AWH.bam hg19 released low read depth, low read length biological replicates with identical biosample ENCFF505DZG bam alignments ENCSR000EHD ChIP-seq EFO:0002067 K562 cell line Homo sapiens CHD2-human ENCAB000AFG DNA see document see document False 2011-10-29 ENCODE 2 36 ENCFF000YJU, ENCFF807MUK 656717041 ENCODE Processing Pipeline 06856f863f224ab38305ba1bd05d7e53 https://www.encodeproject.org/files/ENCFF505DZG/@@download/ENCFF505DZG.bam hg19 released low read depth, low read length biological replicates with identical biosample ENCFF341WTQ bam alignments ENCSR000EHD ChIP-seq EFO:0002067 K562 cell line Homo sapiens CHD2-human ENCAB000AFG DNA see document see document False 2011-10-29 ENCODE 1 36 ENCFF000YJT, ENCFF807MUK 632134094 ENCODE Processing Pipeline 8f63669e19388a8a3c1e0773e0c89253 https://www.encodeproject.org/files/ENCFF341WTQ/@@download/ENCFF341WTQ.bam hg19 released low read depth, low read length biological replicates with identical biosample ENCFF388XUR bam unfiltered alignments ENCSR000EHD ChIP-seq EFO:0002067 K562 cell line Homo sapiens CHD2-human ENCAB000AFG DNA see document see document False 2011-10-29 ENCODE 1 36 ENCFF000YJT, ENCFF807MUK 963118731 ENCODE Processing Pipeline efe00394c02aeb2f97d8e2c7b7c46849 https://www.encodeproject.org/files/ENCFF388XUR/@@download/ENCFF388XUR.bam hg19 released low read depth, low read length biological replicates with identical biosample ENCFF000QDZ bam alignments ENCSR000BKV ChIP-seq EFO:0002067 K562 cell line Homo sapiens RAD21-human ENCAB000AKG DNA see document see document False 2011-07-18 ENCODE 1 ENCFF000QEJ 616473991 Richard Myers, HAIB b6c6b826efb5b3633ae3c335dee47bb6 https://www.encodeproject.org/files/ENCFF000QDZ/@@download/ENCFF000QDZ.bam hg19 archived mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF000QEA bigBed broadPeak peaks ENCSR000BKV ChIP-seq EFO:0002067 K562 cell line Homo sapiens RAD21-human ENCAB000AKG DNA see document see document False 2011-07-18 ENCODE 1 1 ENCFF001UKX 825113 Richard Myers, HAIB f62eec652f0d11cdc9dd698efdd62b99 https://www.encodeproject.org/files/ENCFF000QEA/@@download/ENCFF000QEA.bigBed hg19 archived mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF000QEB bigBed broadPeak peaks ENCSR000BKV ChIP-seq EFO:0002067 K562 cell line Homo sapiens RAD21-human ENCAB000AKG DNA see document see document False 2011-07-18 ENCODE 2 1 ENCFF001UKY 1157391 Richard Myers, HAIB 462ff33dec8215c64e85fac0f60fb89f https://www.encodeproject.org/files/ENCFF000QEB/@@download/ENCFF000QEB.bigBed hg19 archived mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF000QEC bam alignments ENCSR000BKV ChIP-seq EFO:0002067 K562 cell line Homo sapiens RAD21-human ENCAB000AKG DNA see document see document False 2011-07-18 ENCODE 2 ENCFF000QEH 427383616 Richard Myers, HAIB 05ef66cecf75478e87f80b580fa0b9b2 https://www.encodeproject.org/files/ENCFF000QEC/@@download/ENCFF000QEC.bam hg19 archived mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF000QEE bigWig raw signal ENCSR000BKV ChIP-seq EFO:0002067 K562 cell line Homo sapiens RAD21-human ENCAB000AKG DNA see document see document False 2011-07-18 ENCODE 1 1 17981694 Richard Myers, HAIB 6a88ab646560f6d6190c8cd4c181eba7 https://www.encodeproject.org/files/ENCFF000QEE/@@download/ENCFF000QEE.bigWig hg19 archived mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample, missing derived_from insufficient read depth ENCFF000QEF bigWig raw signal ENCSR000BKV ChIP-seq EFO:0002067 K562 cell line Homo sapiens RAD21-human ENCAB000AKG DNA see document see document False 2011-07-18 ENCODE 2 1 21588387 Richard Myers, HAIB b36c8131bd41709835ceed4c53d562c0 https://www.encodeproject.org/files/ENCFF000QEF/@@download/ENCFF000QEF.bigWig hg19 archived mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample, missing derived_from insufficient read depth ENCFF000QEH fastq reads ENCSR000BKV ChIP-seq EFO:0002067 K562 cell line Homo sapiens RAD21-human ENCAB000AKG DNA see document see document False 2011-07-18 ENCODE 2 1 36 single-ended 406161650 Richard Myers, HAIB 0b89f08a4eb98e12b2dd0b720c6d4808 https://www.encodeproject.org/files/ENCFF000QEH/@@download/ENCFF000QEH.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000QEU/ released mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF000QEJ fastq reads ENCSR000BKV ChIP-seq EFO:0002067 K562 cell line Homo sapiens RAD21-human ENCAB000AKG DNA see document see document False 2011-07-18 ENCODE 1 1 36 single-ended 825328424 Richard Myers, HAIB 19ee5547fd8b4d1ec69070be287766df https://www.encodeproject.org/files/ENCFF000QEJ/@@download/ENCFF000QEJ.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000QET/ released mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF001UKX bed broadPeak peaks ENCSR000BKV ChIP-seq EFO:0002067 K562 cell line Homo sapiens RAD21-human ENCAB000AKG DNA see document see document False 2011-07-18 ENCODE 1 1 578351 Richard Myers, HAIB 59855e37b44e6bfa17dfb8419a9ebb13 https://www.encodeproject.org/files/ENCFF001UKX/@@download/ENCFF001UKX.bed.gz hg19 archived mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample, missing derived_from insufficient read depth ENCFF001UKY bed broadPeak peaks ENCSR000BKV ChIP-seq EFO:0002067 K562 cell line Homo sapiens RAD21-human ENCAB000AKG DNA see document see document False 2011-07-18 ENCODE 2 1 699758 Richard Myers, HAIB 42ae11ba2a9c020742d6b1d328664fd3 https://www.encodeproject.org/files/ENCFF001UKY/@@download/ENCFF001UKY.bed.gz hg19 archived mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample, missing derived_from insufficient read depth ENCFF002CMK bed narrowPeak optimal idr thresholded peaks ENCSR000BKV ChIP-seq EFO:0002067 K562 cell line Homo sapiens RAD21-human ENCAB000AKG DNA see document see document False 2011-07-18 ENCODE 750678 ENCODE Consortium Analysis Working Group 2088844e8679b778990032cd82e725c4 https://www.encodeproject.org/files/ENCFF002CMK/@@download/ENCFF002CMK.bed.gz hg19 archived mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample, missing derived_from insufficient read depth ENCFF573FCT bigBed narrowPeak optimal idr thresholded peaks ENCSR000BKV ChIP-seq EFO:0002067 K562 cell line Homo sapiens RAD21-human ENCAB000AKG DNA see document see document False 2011-07-18 ENCODE ENCFF002CMK 1697946 ENCODE Consortium 759b8a1b6029d43e6c840832b52e5d03 https://www.encodeproject.org/files/ENCFF573FCT/@@download/ENCFF573FCT.bigBed hg19 archived mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF780FVK bam unfiltered alignments ENCSR000BKV ChIP-seq EFO:0002067 K562 cell line Homo sapiens RAD21-human ENCAB000AKG DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000QEH, ENCFF643CGH 525139035 ENCODE Processing Pipeline 4a820fa197b033a0bfa80575b6d953ce https://www.encodeproject.org/files/ENCFF780FVK/@@download/ENCFF780FVK.bam GRCh38 released mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF662PEC bam alignments ENCSR000BKV ChIP-seq EFO:0002067 K562 cell line Homo sapiens RAD21-human ENCAB000AKG DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000QEH, ENCFF643CGH 293980391 ENCODE Processing Pipeline 5b953b6250317f30f2b64fe78658254a https://www.encodeproject.org/files/ENCFF662PEC/@@download/ENCFF662PEC.bam GRCh38 released mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF796ZSJ bam alignments ENCSR000BKV ChIP-seq EFO:0002067 K562 cell line Homo sapiens RAD21-human ENCAB000AKG DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000QEJ, ENCFF643CGH 376998428 ENCODE Processing Pipeline 5f66d23793de4501923d352af05a9a13 https://www.encodeproject.org/files/ENCFF796ZSJ/@@download/ENCFF796ZSJ.bam GRCh38 released mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF727JFN bam unfiltered alignments ENCSR000BKV ChIP-seq EFO:0002067 K562 cell line Homo sapiens RAD21-human ENCAB000AKG DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000QEJ, ENCFF643CGH 1010113487 ENCODE Processing Pipeline 700416a0a2d4fd1e61ae7ea6e28e7c8f https://www.encodeproject.org/files/ENCFF727JFN/@@download/ENCFF727JFN.bam GRCh38 released mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF330BAK bam alignments ENCSR000BKV ChIP-seq EFO:0002067 K562 cell line Homo sapiens RAD21-human ENCAB000AKG DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000QEH, ENCFF807MUK 294274348 ENCODE Processing Pipeline ab59b8a8c5f5e8cf7bc6e38568d77fa2 https://www.encodeproject.org/files/ENCFF330BAK/@@download/ENCFF330BAK.bam hg19 released mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF007AXB bam unfiltered alignments ENCSR000BKV ChIP-seq EFO:0002067 K562 cell line Homo sapiens RAD21-human ENCAB000AKG DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000QEH, ENCFF807MUK 524002232 ENCODE Processing Pipeline 8afade2d55526952fa1a3ea197feb84e https://www.encodeproject.org/files/ENCFF007AXB/@@download/ENCFF007AXB.bam hg19 released mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF227YOH bam unfiltered alignments ENCSR000BKV ChIP-seq EFO:0002067 K562 cell line Homo sapiens RAD21-human ENCAB000AKG DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000QEJ, ENCFF807MUK 1007657130 ENCODE Processing Pipeline 789c61d1379b0957ace676bf992d45d6 https://www.encodeproject.org/files/ENCFF227YOH/@@download/ENCFF227YOH.bam hg19 released mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF084HTD bam alignments ENCSR000BKV ChIP-seq EFO:0002067 K562 cell line Homo sapiens RAD21-human ENCAB000AKG DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000QEJ, ENCFF807MUK 377239064 ENCODE Processing Pipeline 826454fc6740f091dd65f17ed5d66757 https://www.encodeproject.org/files/ENCFF084HTD/@@download/ENCFF084HTD.bam hg19 released mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF000YTP bam alignments ENCSR000EFX ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAZ-human ENCAB000AIM DNA see document see document False 2012-05-14 ENCODE 1 1 559303556 Michael Snyder, Stanford b00d53eafe97d9b987b9bb795703e3b1 https://www.encodeproject.org/files/ENCFF000YTP/@@download/ENCFF000YTP.bam hg19 archived low read depth, low read length biological replicates with identical biosample, missing derived_from ENCFF000YTQ bam alignments ENCSR000EFX ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAZ-human ENCAB000AIM DNA see document see document False 2012-05-14 ENCODE 2 1 479992916 Michael Snyder, Stanford 4dd0112e0bd9838891ad8d10069a6c9d https://www.encodeproject.org/files/ENCFF000YTQ/@@download/ENCFF000YTQ.bam hg19 archived low read depth, low read length biological replicates with identical biosample, missing derived_from ENCFF000YTR bigBed narrowPeak peaks ENCSR000EFX ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAZ-human ENCAB000AIM DNA see document see document False 2012-05-14 ENCODE ENCFF001VNU 3305777 Michael Snyder, Stanford d238889400075682d9018afbb8a17235 https://www.encodeproject.org/files/ENCFF000YTR/@@download/ENCFF000YTR.bigBed hg19 archived low read depth, low read length biological replicates with identical biosample ENCFF000YTS fastq reads ENCSR000EFX ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAZ-human ENCAB000AIM DNA see document see document False 2012-05-14 ENCODE 1 1 36 single-ended 1086680007 Michael Snyder, Stanford 7764a7265cc813dc2e85a9e953587f17 https://www.encodeproject.org/files/ENCFF000YTS/@@download/ENCFF000YTS.fastq.gz Illumina Genome Analyzer /files/ENCFF000YRB/ released low read depth, low read length biological replicates with identical biosample ENCFF000YTU fastq reads ENCSR000EFX ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAZ-human ENCAB000AIM DNA see document see document False 2012-05-14 ENCODE 2 1 36 single-ended 1004401048 Michael Snyder, Stanford 7b6df34d5c6334c8d6a84d690b22fe3e https://www.encodeproject.org/files/ENCFF000YTU/@@download/ENCFF000YTU.fastq.gz Illumina Genome Analyzer /files/ENCFF000YRB/ released low read depth, low read length biological replicates with identical biosample ENCFF000YTW bigWig signal ENCSR000EFX ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAZ-human ENCAB000AIM DNA see document see document False 2012-05-14 ENCODE 399913062 Michael Snyder, Stanford a7d4aeb332e8bf21d6de920767727c6f https://www.encodeproject.org/files/ENCFF000YTW/@@download/ENCFF000YTW.bigWig hg19 archived low read depth, low read length biological replicates with identical biosample, missing derived_from ENCFF001VNU bed narrowPeak peaks ENCSR000EFX ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAZ-human ENCAB000AIM DNA see document see document False 2012-05-14 ENCODE 1390144 Michael Snyder, Stanford 571e908772418b3339c3915fa8b881da https://www.encodeproject.org/files/ENCFF001VNU/@@download/ENCFF001VNU.bed.gz hg19 archived low read depth, low read length biological replicates with identical biosample, missing derived_from ENCFF002CXE bed narrowPeak optimal idr thresholded peaks ENCSR000EFX ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAZ-human ENCAB000AIM DNA see document see document False 2012-05-14 ENCODE 721064 ENCODE Consortium Analysis Working Group e1863bce31615f8e2ec3ec40640a81d4 https://www.encodeproject.org/files/ENCFF002CXE/@@download/ENCFF002CXE.bed.gz hg19 archived low read depth, low read length biological replicates with identical biosample, missing derived_from ENCFF065TOG bigBed narrowPeak optimal idr thresholded peaks ENCSR000EFX ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAZ-human ENCAB000AIM DNA see document see document False 2012-05-14 ENCODE ENCFF002CXE 1559720 ENCODE Consortium 8ef644dc214d7be786af39cc94c7a0c0 https://www.encodeproject.org/files/ENCFF065TOG/@@download/ENCFF065TOG.bigBed hg19 archived low read depth, low read length biological replicates with identical biosample ENCFF164ZNV bam unfiltered alignments ENCSR000EFX ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAZ-human ENCAB000AIM DNA see document see document False 2012-05-14 ENCODE 1 36 ENCFF000YTS, ENCFF643CGH 1231637640 ENCODE Processing Pipeline 48e8f5e9cbcd538c9241c781390d4ab3 https://www.encodeproject.org/files/ENCFF164ZNV/@@download/ENCFF164ZNV.bam GRCh38 released low read depth, low read length biological replicates with identical biosample ENCFF103RBU bam alignments ENCSR000EFX ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAZ-human ENCAB000AIM DNA see document see document False 2012-05-14 ENCODE 2 36 ENCFF000YTU, ENCFF643CGH 794374371 ENCODE Processing Pipeline e5249773acb650d4ecb6a51a8ed02650 https://www.encodeproject.org/files/ENCFF103RBU/@@download/ENCFF103RBU.bam GRCh38 released low read depth, low read length biological replicates with identical biosample ENCFF419IJR bam unfiltered alignments ENCSR000EFX ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAZ-human ENCAB000AIM DNA see document see document False 2012-05-14 ENCODE 2 36 ENCFF000YTU, ENCFF643CGH 1111602956 ENCODE Processing Pipeline 94209f1f6d4559b7f852a0f55dc8695d https://www.encodeproject.org/files/ENCFF419IJR/@@download/ENCFF419IJR.bam GRCh38 released low read depth, low read length biological replicates with identical biosample ENCFF966GGG bam alignments ENCSR000EFX ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAZ-human ENCAB000AIM DNA see document see document False 2012-05-14 ENCODE 1 36 ENCFF000YTS, ENCFF643CGH 871983200 ENCODE Processing Pipeline c61ebe0a16cc0626f266cfe399e9d62e https://www.encodeproject.org/files/ENCFF966GGG/@@download/ENCFF966GGG.bam GRCh38 released low read depth, low read length biological replicates with identical biosample ENCFF718DSW bam unfiltered alignments ENCSR000EFX ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAZ-human ENCAB000AIM DNA see document see document False 2012-05-14 ENCODE 2 36 ENCFF000YTU, ENCFF807MUK 1108376607 ENCODE Processing Pipeline ec4c89b0df9d8bfd0ef6f1ca82a04f9f https://www.encodeproject.org/files/ENCFF718DSW/@@download/ENCFF718DSW.bam hg19 released low read depth, low read length biological replicates with identical biosample ENCFF855HEG bam alignments ENCSR000EFX ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAZ-human ENCAB000AIM DNA see document see document False 2012-05-14 ENCODE 2 36 ENCFF000YTU, ENCFF807MUK 795062460 ENCODE Processing Pipeline 17a947964bef64b7fc0fbe8294a72850 https://www.encodeproject.org/files/ENCFF855HEG/@@download/ENCFF855HEG.bam hg19 released low read depth, low read length biological replicates with identical biosample ENCFF734RPW bam unfiltered alignments ENCSR000EFX ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAZ-human ENCAB000AIM DNA see document see document False 2012-05-14 ENCODE 1 36 ENCFF000YTS, ENCFF807MUK 1226432858 ENCODE Processing Pipeline 9a0e76eae613c41042795879c5bb59ff https://www.encodeproject.org/files/ENCFF734RPW/@@download/ENCFF734RPW.bam hg19 released low read depth, low read length biological replicates with identical biosample ENCFF524YGO bam alignments ENCSR000EFX ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAZ-human ENCAB000AIM DNA see document see document False 2012-05-14 ENCODE 1 36 ENCFF000YTS, ENCFF807MUK 872638543 ENCODE Processing Pipeline dd8e6d5a578f7296a4a8685b4244f800 https://www.encodeproject.org/files/ENCFF524YGO/@@download/ENCFF524YGO.bam hg19 released low read depth, low read length biological replicates with identical biosample ENCFF000RWN bam alignments ENCSR000DLY ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-03-17 ENCODE 1 ENCFF000RWV 512848026 Vishwanath Iyer, UTA 430800736a44af531dad4f97f89ee865 https://www.encodeproject.org/files/ENCFF000RWN/@@download/ENCFF000RWN.bam hg19 archived low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF000RWP bigWig base overlap signal ENCSR000DLY ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-03-17 ENCODE 190818451 Vishwanath Iyer, UTA d1210e4a2aaf005be098667cc80e4208 https://www.encodeproject.org/files/ENCFF000RWP/@@download/ENCFF000RWP.bigWig hg19 archived low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample, missing derived_from insufficient read length, insufficient read depth ENCFF000RWQ bam alignments ENCSR000DLY ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-03-17 ENCODE 2 ENCFF000RXB 949354361 Vishwanath Iyer, UTA af9f57932eeb79b4e46b76597b24df2a https://www.encodeproject.org/files/ENCFF000RWQ/@@download/ENCFF000RWQ.bam hg19 archived low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF000RWR bigBed narrowPeak peaks ENCSR000DLY ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-03-17 ENCODE ENCFF001UTF 4702369 Vishwanath Iyer, UTA 8da102e82266fff07c10c84a76f52677 https://www.encodeproject.org/files/ENCFF000RWR/@@download/ENCFF000RWR.bigBed hg19 archived low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF000RWT bigWig signal ENCSR000DLY ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-03-17 ENCODE 2608850454 Vishwanath Iyer, UTA 5bb41aa2179a19a05518a75aea37e446 https://www.encodeproject.org/files/ENCFF000RWT/@@download/ENCFF000RWT.bigWig hg19 archived low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample, missing derived_from insufficient read length, insufficient read depth ENCFF000RWU tar validation ENCSR000DLY ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-03-17 ENCODE 50451847 Vishwanath Iyer, UTA 1ed0e72b3eebdf93ffedec9ed945696b https://www.encodeproject.org/files/ENCFF000RWU/@@download/ENCFF000RWU.tar.gz hg19 archived low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample, missing derived_from insufficient read length, insufficient read depth ENCFF000RWV fastq reads ENCSR000DLY ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-03-17 ENCODE 1 1 35 single-ended 487453392 Vishwanath Iyer, UTA 0cb2219e1742000f919c7b74b042a8ec https://www.encodeproject.org/files/ENCFF000RWV/@@download/ENCFF000RWV.fastq.gz Illumina Genome Analyzer /files/ENCFF000RWS/ released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF000RXB fastq reads ENCSR000DLY ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-03-17 ENCODE 2 1 36 single-ended 1077044139 Vishwanath Iyer, UTA be625e4898d465f75fd1f350e6beeecb https://www.encodeproject.org/files/ENCFF000RXB/@@download/ENCFF000RXB.fastq.gz Illumina Genome Analyzer /files/ENCFF000RWS/ released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF001UTF bed narrowPeak peaks ENCSR000DLY ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-03-17 ENCODE 2943334 Vishwanath Iyer, UTA cce54edb5e2bd0631db9d67b6025055e https://www.encodeproject.org/files/ENCFF001UTF/@@download/ENCFF001UTF.bed.gz hg19 archived low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample, missing derived_from insufficient read length, insufficient read depth ENCFF002DBE bed narrowPeak optimal idr thresholded peaks ENCSR000DLY ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-03-17 ENCODE 393445 ENCODE Consortium Analysis Working Group 76fdcd501f47277f244843987ac855ba https://www.encodeproject.org/files/ENCFF002DBE/@@download/ENCFF002DBE.bed.gz hg19 archived low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample, missing derived_from insufficient read length, insufficient read depth ENCFF036PQX bigBed narrowPeak optimal idr thresholded peaks ENCSR000DLY ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-03-17 ENCODE ENCFF002DBE 1000786 ENCODE Consortium 8c0dfbe348e1209a81720f3b2529e811 https://www.encodeproject.org/files/ENCFF036PQX/@@download/ENCFF036PQX.bigBed hg19 archived low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF151ZKL bam unfiltered alignments ENCSR000DLY ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-03-17 ENCODE 1 35 ENCFF000RWV, ENCFF643CGH 656051073 ENCODE Processing Pipeline 1bc15ae4b010570ad86e2fefd6df1c91 https://www.encodeproject.org/files/ENCFF151ZKL/@@download/ENCFF151ZKL.bam GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF922BNS bam alignments ENCSR000DLY ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-03-17 ENCODE 1 35 ENCFF000RWV, ENCFF643CGH 379694589 ENCODE Processing Pipeline bb93c13a04b3c7eba9c4702925cbe08f https://www.encodeproject.org/files/ENCFF922BNS/@@download/ENCFF922BNS.bam GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF872FER bam unfiltered alignments ENCSR000DLY ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-03-17 ENCODE 2 36 ENCFF000RXB, ENCFF643CGH 1301614260 ENCODE Processing Pipeline 29579769054296f5904dec54fbc5b095 https://www.encodeproject.org/files/ENCFF872FER/@@download/ENCFF872FER.bam GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF306VZA bam alignments ENCSR000DLY ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-03-17 ENCODE 2 36 ENCFF000RXB, ENCFF643CGH 514735105 ENCODE Processing Pipeline 18255d2ebd0dfc49100d16f54f1c5b22 https://www.encodeproject.org/files/ENCFF306VZA/@@download/ENCFF306VZA.bam GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF232TIW bam alignments ENCSR000DLY ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-03-17 ENCODE 1 35 ENCFF000RWV, ENCFF807MUK 380108233 ENCODE Processing Pipeline c7f6eab0097d88354578dc6361cec877 https://www.encodeproject.org/files/ENCFF232TIW/@@download/ENCFF232TIW.bam hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF571RLG bam unfiltered alignments ENCSR000DLY ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-03-17 ENCODE 1 35 ENCFF000RWV, ENCFF807MUK 655060647 ENCODE Processing Pipeline 51a6160b568e4b1cf372d994a4a372d5 https://www.encodeproject.org/files/ENCFF571RLG/@@download/ENCFF571RLG.bam hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF557TSR bam unfiltered alignments ENCSR000DLY ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-03-17 ENCODE 2 36 ENCFF000RXB, ENCFF807MUK 1299028740 ENCODE Processing Pipeline 140cc77ccdbdc200028288529088c1d5 https://www.encodeproject.org/files/ENCFF557TSR/@@download/ENCFF557TSR.bam hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF397EBT bam alignments ENCSR000DLY ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-03-17 ENCODE 2 36 ENCFF000RXB, ENCFF807MUK 515195901 ENCODE Processing Pipeline c0ca48ee7c148b4d99bbb32fa36d4065 https://www.encodeproject.org/files/ENCFF397EBT/@@download/ENCFF397EBT.bam hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF000YLL bam alignments ENCSR000EGG ChIP-seq EFO:0002067 K562 cell line Homo sapiens RCOR1-human ENCAB000AFK DNA see document see document False 2012-05-14 ENCODE 1 1 455434872 Michael Snyder, Stanford 777b551d94a65bf8762cbd8189981b1e https://www.encodeproject.org/files/ENCFF000YLL/@@download/ENCFF000YLL.bam hg19 archived low read depth, low read length biological replicates with identical biosample, missing derived_from ENCFF000YLM bigBed narrowPeak peaks ENCSR000EGG ChIP-seq EFO:0002067 K562 cell line Homo sapiens RCOR1-human ENCAB000AFK DNA see document see document False 2012-05-14 ENCODE ENCFF001VMX 4502464 Michael Snyder, Stanford fa2c2cb3d890db84f9317b7f8448898b https://www.encodeproject.org/files/ENCFF000YLM/@@download/ENCFF000YLM.bigBed hg19 archived low read depth, low read length biological replicates with identical biosample ENCFF000YLN bam alignments ENCSR000EGG ChIP-seq EFO:0002067 K562 cell line Homo sapiens RCOR1-human ENCAB000AFK DNA see document see document False 2012-05-14 ENCODE 2 1 389289617 Michael Snyder, Stanford e9a786c7ff4cdb6491bd0da2b2bebe7b https://www.encodeproject.org/files/ENCFF000YLN/@@download/ENCFF000YLN.bam hg19 archived low read depth, low read length biological replicates with identical biosample, missing derived_from ENCFF000YLO fastq reads ENCSR000EGG ChIP-seq EFO:0002067 K562 cell line Homo sapiens RCOR1-human ENCAB000AFK DNA see document see document False 2012-05-14 ENCODE 1 1 36 single-ended 944523903 Michael Snyder, Stanford 084549c20fb2a8987b64d2d1a92f5b3d https://www.encodeproject.org/files/ENCFF000YLO/@@download/ENCFF000YLO.fastq.gz Illumina Genome Analyzer /files/ENCFF000YRB/ released low read depth, low read length biological replicates with identical biosample ENCFF000YLQ fastq reads ENCSR000EGG ChIP-seq EFO:0002067 K562 cell line Homo sapiens RCOR1-human ENCAB000AFK DNA see document see document False 2012-05-14 ENCODE 2 1 36 single-ended 792847153 Michael Snyder, Stanford abc827f42106952963d30b51ab44ba6f https://www.encodeproject.org/files/ENCFF000YLQ/@@download/ENCFF000YLQ.fastq.gz Illumina Genome Analyzer /files/ENCFF000YRB/ released low read depth, low read length biological replicates with identical biosample ENCFF000YLS bigWig signal ENCSR000EGG ChIP-seq EFO:0002067 K562 cell line Homo sapiens RCOR1-human ENCAB000AFK DNA see document see document False 2012-05-14 ENCODE 345057056 Michael Snyder, Stanford 58434aa7f6978a9d17e7e279bc4136a1 https://www.encodeproject.org/files/ENCFF000YLS/@@download/ENCFF000YLS.bigWig hg19 archived low read depth, low read length biological replicates with identical biosample, missing derived_from ENCFF001VMX bed narrowPeak peaks ENCSR000EGG ChIP-seq EFO:0002067 K562 cell line Homo sapiens RCOR1-human ENCAB000AFK DNA see document see document False 2012-05-14 ENCODE 1957921 Michael Snyder, Stanford 1efe7c07cb88530f416b34924fde2d3c https://www.encodeproject.org/files/ENCFF001VMX/@@download/ENCFF001VMX.bed.gz hg19 archived low read depth, low read length biological replicates with identical biosample, missing derived_from ENCFF002CWK bed narrowPeak optimal idr thresholded peaks ENCSR000EGG ChIP-seq EFO:0002067 K562 cell line Homo sapiens RCOR1-human ENCAB000AFK DNA see document see document False 2012-05-14 ENCODE 773454 ENCODE Consortium Analysis Working Group 7da6aa23d8d814b41ba1072b9b31d1cb https://www.encodeproject.org/files/ENCFF002CWK/@@download/ENCFF002CWK.bed.gz hg19 archived low read depth, low read length biological replicates with identical biosample, missing derived_from ENCFF661HIR bigBed narrowPeak optimal idr thresholded peaks ENCSR000EGG ChIP-seq EFO:0002067 K562 cell line Homo sapiens RCOR1-human ENCAB000AFK DNA see document see document False 2012-05-14 ENCODE ENCFF002CWK 1656430 ENCODE Consortium 4d1da4c59ee893b565f63ce2dcfe5fe3 https://www.encodeproject.org/files/ENCFF661HIR/@@download/ENCFF661HIR.bigBed hg19 archived low read depth, low read length biological replicates with identical biosample ENCFF167HUG bam unfiltered alignments ENCSR000EGG ChIP-seq EFO:0002067 K562 cell line Homo sapiens RCOR1-human ENCAB000AFK DNA see document see document False 2012-05-14 ENCODE 1 36 ENCFF000YLO, ENCFF643CGH 1057455688 ENCODE Processing Pipeline bc49fe5926a284f91e52cd441c9fd88e https://www.encodeproject.org/files/ENCFF167HUG/@@download/ENCFF167HUG.bam GRCh38 released low read depth, low read length biological replicates with identical biosample ENCFF444OMB bam alignments ENCSR000EGG ChIP-seq EFO:0002067 K562 cell line Homo sapiens RCOR1-human ENCAB000AFK DNA see document see document False 2012-05-14 ENCODE 1 36 ENCFF000YLO, ENCFF643CGH 741656214 ENCODE Processing Pipeline 7671a9f04e0ffccb745ae2b0016f7546 https://www.encodeproject.org/files/ENCFF444OMB/@@download/ENCFF444OMB.bam GRCh38 released low read depth, low read length biological replicates with identical biosample ENCFF755IVD bam unfiltered alignments ENCSR000EGG ChIP-seq EFO:0002067 K562 cell line Homo sapiens RCOR1-human ENCAB000AFK DNA see document see document False 2012-05-14 ENCODE 2 36 ENCFF000YLQ, ENCFF643CGH 908914662 ENCODE Processing Pipeline 914449eb8eb30b38263ccd03566c7b03 https://www.encodeproject.org/files/ENCFF755IVD/@@download/ENCFF755IVD.bam GRCh38 released low read depth, low read length biological replicates with identical biosample ENCFF523QGZ bam alignments ENCSR000EGG ChIP-seq EFO:0002067 K562 cell line Homo sapiens RCOR1-human ENCAB000AFK DNA see document see document False 2012-05-14 ENCODE 2 36 ENCFF000YLQ, ENCFF643CGH 618088718 ENCODE Processing Pipeline 922b814415cebae75387e6cdd28b7c27 https://www.encodeproject.org/files/ENCFF523QGZ/@@download/ENCFF523QGZ.bam GRCh38 released low read depth, low read length biological replicates with identical biosample ENCFF407IDZ bam alignments ENCSR000EGG ChIP-seq EFO:0002067 K562 cell line Homo sapiens RCOR1-human ENCAB000AFK DNA see document see document False 2012-05-14 ENCODE 2 36 ENCFF000YLQ, ENCFF807MUK 618584138 ENCODE Processing Pipeline bab45510b9b61b2d1221405567db16de https://www.encodeproject.org/files/ENCFF407IDZ/@@download/ENCFF407IDZ.bam hg19 released low read depth, low read length biological replicates with identical biosample ENCFF513INN bam unfiltered alignments ENCSR000EGG ChIP-seq EFO:0002067 K562 cell line Homo sapiens RCOR1-human ENCAB000AFK DNA see document see document False 2012-05-14 ENCODE 1 36 ENCFF000YLO, ENCFF807MUK 1054668487 ENCODE Processing Pipeline 3cb6695c538f983f1d13ba8577039b05 https://www.encodeproject.org/files/ENCFF513INN/@@download/ENCFF513INN.bam hg19 released low read depth, low read length biological replicates with identical biosample ENCFF788YXI bam unfiltered alignments ENCSR000EGG ChIP-seq EFO:0002067 K562 cell line Homo sapiens RCOR1-human ENCAB000AFK DNA see document see document False 2012-05-14 ENCODE 2 36 ENCFF000YLQ, ENCFF807MUK 906494276 ENCODE Processing Pipeline 189e5a83a75dc267ee4dc5507c183299 https://www.encodeproject.org/files/ENCFF788YXI/@@download/ENCFF788YXI.bam hg19 released low read depth, low read length biological replicates with identical biosample ENCFF880QRW bam alignments ENCSR000EGG ChIP-seq EFO:0002067 K562 cell line Homo sapiens RCOR1-human ENCAB000AFK DNA see document see document False 2012-05-14 ENCODE 1 36 ENCFF000YLO, ENCFF807MUK 742224461 ENCODE Processing Pipeline 571c78d255638c29f012b45e0b83979d https://www.encodeproject.org/files/ENCFF880QRW/@@download/ENCFF880QRW.bam hg19 released low read depth, low read length biological replicates with identical biosample ENCFF000ZFJ fastq reads ENCSR000EFQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZMIZ1-human ENCAB000AMQ DNA see document see document False 2012-08-20 ENCODE 1 1 36 single-ended 1135640089 Michael Snyder, Stanford bebabba9b86d7447011a358952edb4e2 https://www.encodeproject.org/files/ENCFF000ZFJ/@@download/ENCFF000ZFJ.fastq.gz Illumina Genome Analyzer /files/ENCFF000YRB/ released low read depth, low read length biological replicates with identical biosample ENCFF000ZFK bigBed narrowPeak peaks ENCSR000EFQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZMIZ1-human ENCAB000AMQ DNA see document see document False 2012-08-20 ENCODE ENCFF001VPQ 2233673 Michael Snyder, Stanford 351713205f8edc0aefa2b124a80175f1 https://www.encodeproject.org/files/ENCFF000ZFK/@@download/ENCFF000ZFK.bigBed hg19 archived low read depth, low read length biological replicates with identical biosample ENCFF000ZFM fastq reads ENCSR000EFQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZMIZ1-human ENCAB000AMQ DNA see document see document False 2012-08-20 ENCODE 2 1 36 single-ended 828726590 Michael Snyder, Stanford 778e4aeab44d9c95f9589643e049bad8 https://www.encodeproject.org/files/ENCFF000ZFM/@@download/ENCFF000ZFM.fastq.gz Illumina Genome Analyzer /files/ENCFF000YRB/ released low read depth, low read length biological replicates with identical biosample ENCFF000ZFO bigWig signal ENCSR000EFQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZMIZ1-human ENCAB000AMQ DNA see document see document False 2012-08-20 ENCODE 395261487 Michael Snyder, Stanford 9aac08b39071db7f6008194b0ff9c085 https://www.encodeproject.org/files/ENCFF000ZFO/@@download/ENCFF000ZFO.bigWig hg19 archived low read depth, low read length biological replicates with identical biosample, missing derived_from ENCFF000ZFP bam alignments ENCSR000EFQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZMIZ1-human ENCAB000AMQ DNA see document see document False 2012-08-20 ENCODE 1 1 582919379 Michael Snyder, Stanford 696104d699e3d71285d78ea9d56f9ea1 https://www.encodeproject.org/files/ENCFF000ZFP/@@download/ENCFF000ZFP.bam hg19 archived low read depth, low read length biological replicates with identical biosample, missing derived_from ENCFF000ZFQ bam alignments ENCSR000EFQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZMIZ1-human ENCAB000AMQ DNA see document see document False 2012-08-20 ENCODE 2 1 477653834 Michael Snyder, Stanford e67c1dcdbe9fac4bd83354690815d91f https://www.encodeproject.org/files/ENCFF000ZFQ/@@download/ENCFF000ZFQ.bam hg19 archived low read depth, low read length biological replicates with identical biosample, missing derived_from ENCFF001VPQ bed narrowPeak peaks ENCSR000EFQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZMIZ1-human ENCAB000AMQ DNA see document see document False 2012-08-20 ENCODE 862896 Michael Snyder, Stanford 19d2b7ddc8ef34d60def3494ebc4311e https://www.encodeproject.org/files/ENCFF001VPQ/@@download/ENCFF001VPQ.bed.gz hg19 archived low read depth, low read length biological replicates with identical biosample, missing derived_from ENCFF025VHS bam unfiltered alignments ENCSR000EFQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZMIZ1-human ENCAB000AMQ DNA see document see document False 2012-08-20 ENCODE 2 36 ENCFF000ZFM, ENCFF643CGH 964878571 ENCODE Processing Pipeline 28374e133ad931a7650f5457c95f2b4c https://www.encodeproject.org/files/ENCFF025VHS/@@download/ENCFF025VHS.bam GRCh38 released low read depth, low read length biological replicates with identical biosample ENCFF991RVH bam alignments ENCSR000EFQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZMIZ1-human ENCAB000AMQ DNA see document see document False 2012-08-20 ENCODE 2 36 ENCFF000ZFM, ENCFF643CGH 663750011 ENCODE Processing Pipeline f653f759b0d389101379df27809ee914 https://www.encodeproject.org/files/ENCFF991RVH/@@download/ENCFF991RVH.bam GRCh38 released low read depth, low read length biological replicates with identical biosample ENCFF308ELT bam unfiltered alignments ENCSR000EFQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZMIZ1-human ENCAB000AMQ DNA see document see document False 2012-08-20 ENCODE 1 36 ENCFF000ZFJ, ENCFF643CGH 1313580682 ENCODE Processing Pipeline c3bf49fdc8bd4cbb5afee24e1f2abb6b https://www.encodeproject.org/files/ENCFF308ELT/@@download/ENCFF308ELT.bam GRCh38 released low read depth, low read length biological replicates with identical biosample ENCFF682RUI bam alignments ENCSR000EFQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZMIZ1-human ENCAB000AMQ DNA see document see document False 2012-08-20 ENCODE 1 36 ENCFF000ZFJ, ENCFF643CGH 905858265 ENCODE Processing Pipeline c91c2194074fa30054e2b1a0b00f4621 https://www.encodeproject.org/files/ENCFF682RUI/@@download/ENCFF682RUI.bam GRCh38 released low read depth, low read length biological replicates with identical biosample ENCFF915NTX bam unfiltered alignments ENCSR000EFQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZMIZ1-human ENCAB000AMQ DNA see document see document False 2012-08-20 ENCODE 2 36 ENCFF000ZFM, ENCFF807MUK 961117312 ENCODE Processing Pipeline 39577718cb3448072c584c954ac5d879 https://www.encodeproject.org/files/ENCFF915NTX/@@download/ENCFF915NTX.bam hg19 released low read depth, low read length biological replicates with identical biosample ENCFF527VQO bam alignments ENCSR000EFQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZMIZ1-human ENCAB000AMQ DNA see document see document False 2012-08-20 ENCODE 2 36 ENCFF000ZFM, ENCFF807MUK 664251050 ENCODE Processing Pipeline eb1aa9a9b77c61e5902c3f068cd95405 https://www.encodeproject.org/files/ENCFF527VQO/@@download/ENCFF527VQO.bam hg19 released low read depth, low read length biological replicates with identical biosample ENCFF417CFO bam unfiltered alignments ENCSR000EFQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZMIZ1-human ENCAB000AMQ DNA see document see document False 2012-08-20 ENCODE 1 36 ENCFF000ZFJ, ENCFF807MUK 1308144515 ENCODE Processing Pipeline 6e343a3723b415d23b3bdf3d037b2354 https://www.encodeproject.org/files/ENCFF417CFO/@@download/ENCFF417CFO.bam hg19 released low read depth, low read length biological replicates with identical biosample ENCFF036GYH bam alignments ENCSR000EFQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZMIZ1-human ENCAB000AMQ DNA see document see document False 2012-08-20 ENCODE 1 36 ENCFF000ZFJ, ENCFF807MUK 906466290 ENCODE Processing Pipeline 8bac4db6c162283bdb7b164619d25c42 https://www.encodeproject.org/files/ENCFF036GYH/@@download/ENCFF036GYH.bam hg19 released low read depth, low read length biological replicates with identical biosample ENCFF000RVZ bam alignments ENCSR000DMA ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCF-human ENCAB000AXY DNA see document see document False 2012-08-27 ENCODE 1 ENCFF000RWH 279084064 Vishwanath Iyer, UTA b6f045181f3c736fe61f1115a8f0769f https://www.encodeproject.org/files/ENCFF000RVZ/@@download/ENCFF000RVZ.bam hg19 released biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth ENCFF000RWA bam alignments ENCSR000DMA ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCF-human ENCAB000AXY DNA see document see document False 2012-08-27 ENCODE 2 ENCFF000RWK 258741395 Vishwanath Iyer, UTA ffca69645c43876754c54eadf64fbd4a https://www.encodeproject.org/files/ENCFF000RWA/@@download/ENCFF000RWA.bam hg19 released biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth ENCFF000RWB bam alignments ENCSR000DMA ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCF-human ENCAB000AXY DNA see document see document False 2012-08-27 ENCODE 3 ENCFF000RWO 565453098 Vishwanath Iyer, UTA d8c249b29be04638c9b23cc197c7dba1 https://www.encodeproject.org/files/ENCFF000RWB/@@download/ENCFF000RWB.bam hg19 released biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth ENCFF000RWC bigWig base overlap signal ENCSR000DMA ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCF-human ENCAB000AXY DNA see document see document False 2012-08-27 ENCODE 168398929 Vishwanath Iyer, UTA 9dccab6eae0c53c747788ef69a6e8ede https://www.encodeproject.org/files/ENCFF000RWC/@@download/ENCFF000RWC.bigWig hg19 released biological replicates with identical biosample, missing derived_from insufficient read length, insufficient read depth extremely low read depth ENCFF000RWF bigBed narrowPeak peaks ENCSR000DMA ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCF-human ENCAB000AXY DNA see document see document False 2012-08-27 ENCODE ENCFF001UTE 2273755 Vishwanath Iyer, UTA 88a19c1c4f237d4dfc9062502ee76e46 https://www.encodeproject.org/files/ENCFF000RWF/@@download/ENCFF000RWF.bigBed hg19 released biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth ENCFF000RWH fastq reads ENCSR000DMA ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCF-human ENCAB000AXY DNA see document see document False 2012-08-27 ENCODE 1 1 35 single-ended 270474920 Vishwanath Iyer, UTA e7d01096a547d126f43b37595ab9a73e https://www.encodeproject.org/files/ENCFF000RWH/@@download/ENCFF000RWH.fastq.gz Illumina Genome Analyzer /files/ENCFF000RWS/ released biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth ENCFF000RWI bigWig signal ENCSR000DMA ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCF-human ENCAB000AXY DNA see document see document False 2012-08-27 ENCODE 3524086472 Vishwanath Iyer, UTA 71923247a2a46e312b55a484700e8f5e https://www.encodeproject.org/files/ENCFF000RWI/@@download/ENCFF000RWI.bigWig hg19 released biological replicates with identical biosample, missing derived_from insufficient read length, insufficient read depth extremely low read depth ENCFF000RWJ tar validation ENCSR000DMA ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCF-human ENCAB000AXY DNA see document see document False 2012-08-27 ENCODE 50419749 Vishwanath Iyer, UTA 19a8516b14dad6f7216581b3e52c9e1e https://www.encodeproject.org/files/ENCFF000RWJ/@@download/ENCFF000RWJ.tar.gz hg19 released biological replicates with identical biosample, missing derived_from insufficient read length, insufficient read depth extremely low read depth ENCFF000RWK fastq reads ENCSR000DMA ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCF-human ENCAB000AXY DNA see document see document False 2012-08-27 ENCODE 2 1 35 single-ended 245054804 Vishwanath Iyer, UTA f5483a78de4fddd0f3b92e3edb3beea7 https://www.encodeproject.org/files/ENCFF000RWK/@@download/ENCFF000RWK.fastq.gz Illumina Genome Analyzer /files/ENCFF000RWS/ released biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth ENCFF000RWO fastq reads ENCSR000DMA ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCF-human ENCAB000AXY DNA see document see document False 2012-08-27 ENCODE 3 1 35 single-ended 538167339 Vishwanath Iyer, UTA 6f38b2c666e66d2ea2cacb4ce5b6f079 https://www.encodeproject.org/files/ENCFF000RWO/@@download/ENCFF000RWO.fastq.gz Illumina Genome Analyzer /files/ENCFF000RWS/ released biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth ENCFF001UTE bed narrowPeak peaks ENCSR000DMA ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCF-human ENCAB000AXY DNA see document see document False 2012-08-27 ENCODE 1504839 Vishwanath Iyer, UTA 984abaf5e5a6fa22237906bc107644ac https://www.encodeproject.org/files/ENCFF001UTE/@@download/ENCFF001UTE.bed.gz hg19 released biological replicates with identical biosample, missing derived_from insufficient read length, insufficient read depth extremely low read depth ENCFF002DBD bed narrowPeak optimal idr thresholded peaks ENCSR000DMA ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCF-human ENCAB000AXY DNA see document see document False 2012-08-27 ENCODE 1077102 ENCODE Consortium Analysis Working Group 691e48b1344e23067ee35e35c640d364 https://www.encodeproject.org/files/ENCFF002DBD/@@download/ENCFF002DBD.bed.gz hg19 released biological replicates with identical biosample, missing derived_from insufficient read length, insufficient read depth extremely low read depth ENCFF593WPV bigBed narrowPeak optimal idr thresholded peaks ENCSR000DMA ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCF-human ENCAB000AXY DNA see document see document False 2012-08-27 ENCODE ENCFF002DBD 1884028 ENCODE Consortium 066aca7faab55d1f8536f0a1235afa77 https://www.encodeproject.org/files/ENCFF593WPV/@@download/ENCFF593WPV.bigBed hg19 released biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth ENCFF856DBD bam alignments ENCSR000DMA ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCF-human ENCAB000AXY DNA see document see document False 2012-08-27 ENCODE 2 ENCFF000RWK, ENCFF643CGH 205322054 ENCODE Processing Pipeline 533f6ca06b1b23c1367894b4b1daf2ca https://www.encodeproject.org/files/ENCFF856DBD/@@download/ENCFF856DBD.bam GRCh38 released biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth ENCFF783BDQ bam unfiltered alignments ENCSR000DMA ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCF-human ENCAB000AXY DNA see document see document False 2012-08-27 ENCODE 1 ENCFF000RWH, ENCFF643CGH 338352668 ENCODE Processing Pipeline ed11be8f9e0082243c94a283e25c1add https://www.encodeproject.org/files/ENCFF783BDQ/@@download/ENCFF783BDQ.bam GRCh38 released biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth ENCFF202NWU bam unfiltered alignments ENCSR000DMA ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCF-human ENCAB000AXY DNA see document see document False 2012-08-27 ENCODE 3 ENCFF000RWO, ENCFF643CGH 673514776 ENCODE Processing Pipeline 61066b3ad6e829bc2f482094f0d426e5 https://www.encodeproject.org/files/ENCFF202NWU/@@download/ENCFF202NWU.bam GRCh38 released biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth ENCFF003OJN bam alignments ENCSR000DMA ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCF-human ENCAB000AXY DNA see document see document False 2012-08-27 ENCODE 3 ENCFF000RWO, ENCFF643CGH 447105380 ENCODE Processing Pipeline 61a0d44bdaf025d7aff8ec185aece787 https://www.encodeproject.org/files/ENCFF003OJN/@@download/ENCFF003OJN.bam GRCh38 released biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth ENCFF242MMQ bam unfiltered alignments ENCSR000DMA ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCF-human ENCAB000AXY DNA see document see document False 2012-08-27 ENCODE 2 ENCFF000RWK, ENCFF643CGH 311260955 ENCODE Processing Pipeline ce9760ce1a2ff2f528960a5ec81d814e https://www.encodeproject.org/files/ENCFF242MMQ/@@download/ENCFF242MMQ.bam GRCh38 released biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth ENCFF258HHO bam alignments ENCSR000DMA ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCF-human ENCAB000AXY DNA see document see document False 2012-08-27 ENCODE 1 ENCFF000RWH, ENCFF643CGH 223822474 ENCODE Processing Pipeline 0648041472b93a3db4258cd39bb24e1e https://www.encodeproject.org/files/ENCFF258HHO/@@download/ENCFF258HHO.bam GRCh38 released biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth ENCFF000YFN bam alignments ENCSR000EGD ChIP-seq EFO:0002067 K562 cell line Homo sapiens BACH1-human ENCAB000AEA DNA see document see document False 2012-05-14 ENCODE 1 1 367493908 Michael Snyder, Stanford 02b7d30e018db2996c7d0f28bd0c4f96 https://www.encodeproject.org/files/ENCFF000YFN/@@download/ENCFF000YFN.bam hg19 archived low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample, missing derived_from ENCFF000YFO bigBed narrowPeak peaks ENCSR000EGD ChIP-seq EFO:0002067 K562 cell line Homo sapiens BACH1-human ENCAB000AEA DNA see document see document False 2012-05-14 ENCODE ENCFF001VLZ 873554 Michael Snyder, Stanford 5bc3c8dde5d6a2022a4f72bfdc01c4f9 https://www.encodeproject.org/files/ENCFF000YFO/@@download/ENCFF000YFO.bigBed hg19 archived low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF000YFP fastq reads ENCSR000EGD ChIP-seq EFO:0002067 K562 cell line Homo sapiens BACH1-human ENCAB000AEA DNA see document see document False 2012-05-14 ENCODE 1 1 36 single-ended 780005974 Michael Snyder, Stanford 5cb62dd46abd1f3d9d7a031884fe5279 https://www.encodeproject.org/files/ENCFF000YFP/@@download/ENCFF000YFP.fastq.gz Illumina Genome Analyzer /files/ENCFF000YRB/ released low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF000YFR fastq reads ENCSR000EGD ChIP-seq EFO:0002067 K562 cell line Homo sapiens BACH1-human ENCAB000AEA DNA see document see document False 2012-05-14 ENCODE 2 1 36 single-ended 1275356408 Michael Snyder, Stanford 701ba8b604469d0a5bea851d7cfa0453 https://www.encodeproject.org/files/ENCFF000YFR/@@download/ENCFF000YFR.fastq.gz Illumina Genome Analyzer /files/ENCFF000YRB/ released low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF000YFT bigWig signal ENCSR000EGD ChIP-seq EFO:0002067 K562 cell line Homo sapiens BACH1-human ENCAB000AEA DNA see document see document False 2012-05-14 ENCODE 371135403 Michael Snyder, Stanford 621fdc798641dc27875520888ed3d2ad https://www.encodeproject.org/files/ENCFF000YFT/@@download/ENCFF000YFT.bigWig hg19 archived low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample, missing derived_from ENCFF000YFU bam alignments ENCSR000EGD ChIP-seq EFO:0002067 K562 cell line Homo sapiens BACH1-human ENCAB000AEA DNA see document see document False 2012-05-14 ENCODE 2 1 599390497 Michael Snyder, Stanford a84781e7f5c1472812796f67f338ef91 https://www.encodeproject.org/files/ENCFF000YFU/@@download/ENCFF000YFU.bam hg19 archived low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample, missing derived_from ENCFF001VLZ bed narrowPeak peaks ENCSR000EGD ChIP-seq EFO:0002067 K562 cell line Homo sapiens BACH1-human ENCAB000AEA DNA see document see document False 2012-05-14 ENCODE 429763 Michael Snyder, Stanford 42895329fc8db2bc4549f005a13e4d72 https://www.encodeproject.org/files/ENCFF001VLZ/@@download/ENCFF001VLZ.bed.gz hg19 archived low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample, missing derived_from ENCFF002CVO bed narrowPeak optimal idr thresholded peaks ENCSR000EGD ChIP-seq EFO:0002067 K562 cell line Homo sapiens BACH1-human ENCAB000AEA DNA see document see document False 2012-05-14 ENCODE 101541 ENCODE Consortium Analysis Working Group ffaad9c424d927abf310d20c1269cd5a https://www.encodeproject.org/files/ENCFF002CVO/@@download/ENCFF002CVO.bed.gz hg19 archived low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample, missing derived_from ENCFF178QZC bigBed narrowPeak optimal idr thresholded peaks ENCSR000EGD ChIP-seq EFO:0002067 K562 cell line Homo sapiens BACH1-human ENCAB000AEA DNA see document see document False 2012-05-14 ENCODE ENCFF002CVO 322846 ENCODE Consortium 4f9e7683fb786b87da12ef4c2c1e3d89 https://www.encodeproject.org/files/ENCFF178QZC/@@download/ENCFF178QZC.bigBed hg19 archived low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF730CHT bam unfiltered alignments ENCSR000EGD ChIP-seq EFO:0002067 K562 cell line Homo sapiens BACH1-human ENCAB000AEA DNA see document see document False 2012-05-14 ENCODE 1 36 ENCFF000YFP, ENCFF643CGH 906169151 ENCODE Processing Pipeline f89cd027b37a22206b952b4a98cb9399 https://www.encodeproject.org/files/ENCFF730CHT/@@download/ENCFF730CHT.bam GRCh38 released low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF151GOI bam alignments ENCSR000EGD ChIP-seq EFO:0002067 K562 cell line Homo sapiens BACH1-human ENCAB000AEA DNA see document see document False 2012-05-14 ENCODE 1 36 ENCFF000YFP, ENCFF643CGH 591346572 ENCODE Processing Pipeline 386cd41c15bee84a2fd42a5e926f0295 https://www.encodeproject.org/files/ENCFF151GOI/@@download/ENCFF151GOI.bam GRCh38 released low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF540DXB bam alignments ENCSR000EGD ChIP-seq EFO:0002067 K562 cell line Homo sapiens BACH1-human ENCAB000AEA DNA see document see document False 2012-05-14 ENCODE 2 36 ENCFF000YFR, ENCFF643CGH 947719624 ENCODE Processing Pipeline f138ff61b48f7f4a7819d79925731769 https://www.encodeproject.org/files/ENCFF540DXB/@@download/ENCFF540DXB.bam GRCh38 released low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF645XJA bam unfiltered alignments ENCSR000EGD ChIP-seq EFO:0002067 K562 cell line Homo sapiens BACH1-human ENCAB000AEA DNA see document see document False 2012-05-14 ENCODE 2 36 ENCFF000YFR, ENCFF643CGH 1446138854 ENCODE Processing Pipeline 9c0432437d9f0df0814973ec5d048755 https://www.encodeproject.org/files/ENCFF645XJA/@@download/ENCFF645XJA.bam GRCh38 released low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF691LNQ bam unfiltered alignments ENCSR000EGD ChIP-seq EFO:0002067 K562 cell line Homo sapiens BACH1-human ENCAB000AEA DNA see document see document False 2012-05-14 ENCODE 1 36 ENCFF000YFP, ENCFF807MUK 902152467 ENCODE Processing Pipeline 1908a88c1c413514a7edd9a529fa6711 https://www.encodeproject.org/files/ENCFF691LNQ/@@download/ENCFF691LNQ.bam hg19 released low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF751ATX bam alignments ENCSR000EGD ChIP-seq EFO:0002067 K562 cell line Homo sapiens BACH1-human ENCAB000AEA DNA see document see document False 2012-05-14 ENCODE 1 36 ENCFF000YFP, ENCFF807MUK 591773013 ENCODE Processing Pipeline 7ec0030e9fa7e9a915ec86da5a4e2764 https://www.encodeproject.org/files/ENCFF751ATX/@@download/ENCFF751ATX.bam hg19 released low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF736IWI bam unfiltered alignments ENCSR000EGD ChIP-seq EFO:0002067 K562 cell line Homo sapiens BACH1-human ENCAB000AEA DNA see document see document False 2012-05-14 ENCODE 2 36 ENCFF000YFR, ENCFF807MUK 1439770751 ENCODE Processing Pipeline c8982cfb3f1380b8d40c422f127ca67e https://www.encodeproject.org/files/ENCFF736IWI/@@download/ENCFF736IWI.bam hg19 released low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF866OHV bam alignments ENCSR000EGD ChIP-seq EFO:0002067 K562 cell line Homo sapiens BACH1-human ENCAB000AEA DNA see document see document False 2012-05-14 ENCODE 2 36 ENCFF000YFR, ENCFF807MUK 948039971 ENCODE Processing Pipeline 54478e01f236d3e032539bcb2bf50fe8 https://www.encodeproject.org/files/ENCFF866OHV/@@download/ENCFF866OHV.bam hg19 released low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF610LNB bigWig signal p-value ENCSR000EGD ChIP-seq EFO:0002067 K562 cell line Homo sapiens BACH1-human ENCAB000AEA DNA see document see document False 2012-05-14 ENCODE 1 ENCFF710NTS, ENCFF751ATX 381486908 ENCODE Processing Pipeline 1dfd68ad181c24c2848c41d1e7624837 https://www.encodeproject.org/files/ENCFF610LNB/@@download/ENCFF610LNB.bigWig hg19 released low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF424SPZ bigWig signal p-value ENCSR000EGD ChIP-seq EFO:0002067 K562 cell line Homo sapiens BACH1-human ENCAB000AEA DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF710NTS, ENCFF751ATX, ENCFF866OHV 528578978 ENCODE Processing Pipeline 6676287d52c6c4f7083454733ece0910 https://www.encodeproject.org/files/ENCFF424SPZ/@@download/ENCFF424SPZ.bigWig hg19 released low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF932JFE bigWig signal p-value ENCSR000EGD ChIP-seq EFO:0002067 K562 cell line Homo sapiens BACH1-human ENCAB000AEA DNA see document see document False 2012-05-14 ENCODE 2 ENCFF710NTS, ENCFF866OHV 411771527 ENCODE Processing Pipeline e76b90e2270bc18226cdbef7519ea351 https://www.encodeproject.org/files/ENCFF932JFE/@@download/ENCFF932JFE.bigWig hg19 released low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF848XPQ bigWig fold change over control ENCSR000EGD ChIP-seq EFO:0002067 K562 cell line Homo sapiens BACH1-human ENCAB000AEA DNA see document see document False 2012-05-14 ENCODE 1 ENCFF710NTS, ENCFF751ATX 309508355 ENCODE Processing Pipeline 9eb08e1450ee68e68df812899d9c8655 https://www.encodeproject.org/files/ENCFF848XPQ/@@download/ENCFF848XPQ.bigWig hg19 released low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF107CCL bed narrowPeak peaks ENCSR000EGD ChIP-seq EFO:0002067 K562 cell line Homo sapiens BACH1-human ENCAB000AEA DNA see document see document False 2012-05-14 ENCODE 1 ENCFF710NTS, ENCFF751ATX 4278578 ENCODE Processing Pipeline b256805c9fc102b8db586279a1c74419 https://www.encodeproject.org/files/ENCFF107CCL/@@download/ENCFF107CCL.bed.gz hg19 released low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF183XFF bigWig fold change over control ENCSR000EGD ChIP-seq EFO:0002067 K562 cell line Homo sapiens BACH1-human ENCAB000AEA DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF710NTS, ENCFF751ATX, ENCFF866OHV 645558518 ENCODE Processing Pipeline e2c2f4e16c3596721ad2078fb70d4ad7 https://www.encodeproject.org/files/ENCFF183XFF/@@download/ENCFF183XFF.bigWig hg19 released low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF276CQA bed narrowPeak peaks ENCSR000EGD ChIP-seq EFO:0002067 K562 cell line Homo sapiens BACH1-human ENCAB000AEA DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF710NTS, ENCFF751ATX, ENCFF866OHV 5238136 ENCODE Processing Pipeline c3e066aff3729d33b326745168c36d54 https://www.encodeproject.org/files/ENCFF276CQA/@@download/ENCFF276CQA.bed.gz hg19 released low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF192EGX bigBed narrowPeak peaks ENCSR000EGD ChIP-seq EFO:0002067 K562 cell line Homo sapiens BACH1-human ENCAB000AEA DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF276CQA 11089297 ENCODE Processing Pipeline dc39942ca5c19b10e6e1371953ebc5d6 https://www.encodeproject.org/files/ENCFF192EGX/@@download/ENCFF192EGX.bigBed hg19 released low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF423EMU bed narrowPeak optimal idr thresholded peaks ENCSR000EGD ChIP-seq EFO:0002067 K562 cell line Homo sapiens BACH1-human ENCAB000AEA DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF001TDO, ENCFF091TOR, ENCFF107CCL, ENCFF276CQA 88613 ENCODE Processing Pipeline 4a5e60199fc2e91ed05449790c0ead65 https://www.encodeproject.org/files/ENCFF423EMU/@@download/ENCFF423EMU.bed.gz hg19 released low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF846TVV bed narrowPeak conservative idr thresholded peaks ENCSR000EGD ChIP-seq EFO:0002067 K562 cell line Homo sapiens BACH1-human ENCAB000AEA DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF001TDO, ENCFF091TOR, ENCFF107CCL, ENCFF276CQA 83592 ENCODE Processing Pipeline 6f07554d56f50cb18b66639ffb6a81b1 https://www.encodeproject.org/files/ENCFF846TVV/@@download/ENCFF846TVV.bed.gz hg19 released low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF950QFB bigBed narrowPeak optimal idr thresholded peaks ENCSR000EGD ChIP-seq EFO:0002067 K562 cell line Homo sapiens BACH1-human ENCAB000AEA DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF423EMU 198351 ENCODE Processing Pipeline c50262f782492ef903825fbc96dd75da https://www.encodeproject.org/files/ENCFF950QFB/@@download/ENCFF950QFB.bigBed hg19 released low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF498DHC bigWig fold change over control ENCSR000EGD ChIP-seq EFO:0002067 K562 cell line Homo sapiens BACH1-human ENCAB000AEA DNA see document see document False 2012-05-14 ENCODE 2 ENCFF710NTS, ENCFF866OHV 450871568 ENCODE Processing Pipeline 62aaf9aa550162483da409b370bfcd86 https://www.encodeproject.org/files/ENCFF498DHC/@@download/ENCFF498DHC.bigWig hg19 released low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF091TOR bed narrowPeak peaks ENCSR000EGD ChIP-seq EFO:0002067 K562 cell line Homo sapiens BACH1-human ENCAB000AEA DNA see document see document False 2012-05-14 ENCODE 2 ENCFF710NTS, ENCFF866OHV 4520836 ENCODE Processing Pipeline 5e14d520c61c7a53b23765785084f5de https://www.encodeproject.org/files/ENCFF091TOR/@@download/ENCFF091TOR.bed.gz hg19 released low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF514WED bigBed narrowPeak peaks ENCSR000EGD ChIP-seq EFO:0002067 K562 cell line Homo sapiens BACH1-human ENCAB000AEA DNA see document see document False 2012-05-14 ENCODE 1 ENCFF107CCL 10457097 ENCODE Processing Pipeline 94eb176aba63e496ff3486ec0d447ac1 https://www.encodeproject.org/files/ENCFF514WED/@@download/ENCFF514WED.bigBed hg19 released low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF324SHA bigBed narrowPeak peaks ENCSR000EGD ChIP-seq EFO:0002067 K562 cell line Homo sapiens BACH1-human ENCAB000AEA DNA see document see document False 2012-05-14 ENCODE 2 ENCFF091TOR 10988125 ENCODE Processing Pipeline 3bca88f56bb721f94615e1edea85b2e3 https://www.encodeproject.org/files/ENCFF324SHA/@@download/ENCFF324SHA.bigBed hg19 released low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF556NSX bigBed narrowPeak conservative idr thresholded peaks ENCSR000EGD ChIP-seq EFO:0002067 K562 cell line Homo sapiens BACH1-human ENCAB000AEA DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF846TVV 191543 ENCODE Processing Pipeline 0e4abda210781fb449ae058ef2dadf9a https://www.encodeproject.org/files/ENCFF556NSX/@@download/ENCFF556NSX.bigBed hg19 released low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF872IPI bigWig signal p-value ENCSR000EGD ChIP-seq EFO:0002067 K562 cell line Homo sapiens BACH1-human ENCAB000AEA DNA see document see document False 2012-05-14 ENCODE 1 ENCFF023NGN, ENCFF151GOI 448176980 ENCODE Processing Pipeline 1efeb3c03886d5a274149316d43b1c6c https://www.encodeproject.org/files/ENCFF872IPI/@@download/ENCFF872IPI.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF811NIN bigWig fold change over control ENCSR000EGD ChIP-seq EFO:0002067 K562 cell line Homo sapiens BACH1-human ENCAB000AEA DNA see document see document False 2012-05-14 ENCODE 2 ENCFF023NGN, ENCFF540DXB 447425505 ENCODE Processing Pipeline 4d64de2a1ff84244be492efef83618ce https://www.encodeproject.org/files/ENCFF811NIN/@@download/ENCFF811NIN.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF416UYQ bed narrowPeak conservative idr thresholded peaks ENCSR000EGD ChIP-seq EFO:0002067 K562 cell line Homo sapiens BACH1-human ENCAB000AEA DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF063XMG, ENCFF419RSJ, ENCFF755GPS, ENCFF830GYV 82877 ENCODE Processing Pipeline 51c52fafc8050bd1966380f2a1562d17 https://www.encodeproject.org/files/ENCFF416UYQ/@@download/ENCFF416UYQ.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF323SNA bigWig signal p-value ENCSR000EGD ChIP-seq EFO:0002067 K562 cell line Homo sapiens BACH1-human ENCAB000AEA DNA see document see document False 2012-05-14 ENCODE 2 ENCFF023NGN, ENCFF540DXB 480298636 ENCODE Processing Pipeline 2ab3f9b3e142eff3e66624aced76e32d https://www.encodeproject.org/files/ENCFF323SNA/@@download/ENCFF323SNA.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF334RMG bigBed narrowPeak peaks ENCSR000EGD ChIP-seq EFO:0002067 K562 cell line Homo sapiens BACH1-human ENCAB000AEA DNA see document see document False 2012-05-14 ENCODE 1 ENCFF063XMG 10116991 ENCODE Processing Pipeline efbc0cf42b97bcc3a59d3a613abd3afa https://www.encodeproject.org/files/ENCFF334RMG/@@download/ENCFF334RMG.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF581UYO bigWig signal p-value ENCSR000EGD ChIP-seq EFO:0002067 K562 cell line Homo sapiens BACH1-human ENCAB000AEA DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF023NGN, ENCFF151GOI, ENCFF540DXB 521082919 ENCODE Processing Pipeline 383f2a3ef84c5628e5312438a6fff9d2 https://www.encodeproject.org/files/ENCFF581UYO/@@download/ENCFF581UYO.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF830GYV bed narrowPeak peaks ENCSR000EGD ChIP-seq EFO:0002067 K562 cell line Homo sapiens BACH1-human ENCAB000AEA DNA see document see document False 2012-05-14 ENCODE 2 ENCFF023NGN, ENCFF540DXB 4526892 ENCODE Processing Pipeline 58b732d0067976bb8e450feb3f970194 https://www.encodeproject.org/files/ENCFF830GYV/@@download/ENCFF830GYV.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF468XGW bigBed narrowPeak peaks ENCSR000EGD ChIP-seq EFO:0002067 K562 cell line Homo sapiens BACH1-human ENCAB000AEA DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF755GPS 11080925 ENCODE Processing Pipeline 52d1e3b8c2f8d985fba4d751641f62ad https://www.encodeproject.org/files/ENCFF468XGW/@@download/ENCFF468XGW.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF836PHI bigWig fold change over control ENCSR000EGD ChIP-seq EFO:0002067 K562 cell line Homo sapiens BACH1-human ENCAB000AEA DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF023NGN, ENCFF151GOI, ENCFF540DXB 637830508 ENCODE Processing Pipeline 429bf53e1801964eb532d577ce9ef779 https://www.encodeproject.org/files/ENCFF836PHI/@@download/ENCFF836PHI.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF837NLG bigBed narrowPeak optimal idr thresholded peaks ENCSR000EGD ChIP-seq EFO:0002067 K562 cell line Homo sapiens BACH1-human ENCAB000AEA DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF543FNN 198924 ENCODE Processing Pipeline 87048c758a83542b38c8633148556edf https://www.encodeproject.org/files/ENCFF837NLG/@@download/ENCFF837NLG.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF039GCV bigWig fold change over control ENCSR000EGD ChIP-seq EFO:0002067 K562 cell line Homo sapiens BACH1-human ENCAB000AEA DNA see document see document False 2012-05-14 ENCODE 1 ENCFF023NGN, ENCFF151GOI 309086968 ENCODE Processing Pipeline a5610ffe18ace56111835103acf092ad https://www.encodeproject.org/files/ENCFF039GCV/@@download/ENCFF039GCV.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF285RYB bigBed narrowPeak peaks ENCSR000EGD ChIP-seq EFO:0002067 K562 cell line Homo sapiens BACH1-human ENCAB000AEA DNA see document see document False 2012-05-14 ENCODE 2 ENCFF830GYV 11001060 ENCODE Processing Pipeline 4bd457875bb18e68b279394dbba06ee5 https://www.encodeproject.org/files/ENCFF285RYB/@@download/ENCFF285RYB.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF166ARH bigBed narrowPeak conservative idr thresholded peaks ENCSR000EGD ChIP-seq EFO:0002067 K562 cell line Homo sapiens BACH1-human ENCAB000AEA DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF416UYQ 190442 ENCODE Processing Pipeline 3daebe633b2c220a94639c14a23647e1 https://www.encodeproject.org/files/ENCFF166ARH/@@download/ENCFF166ARH.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF063XMG bed narrowPeak peaks ENCSR000EGD ChIP-seq EFO:0002067 K562 cell line Homo sapiens BACH1-human ENCAB000AEA DNA see document see document False 2012-05-14 ENCODE 1 ENCFF023NGN, ENCFF151GOI 3990323 ENCODE Processing Pipeline 61b8477415b3396c6b51d2f2da09eeed https://www.encodeproject.org/files/ENCFF063XMG/@@download/ENCFF063XMG.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF755GPS bed narrowPeak peaks ENCSR000EGD ChIP-seq EFO:0002067 K562 cell line Homo sapiens BACH1-human ENCAB000AEA DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF023NGN, ENCFF151GOI, ENCFF540DXB 5196760 ENCODE Processing Pipeline fa369f2e298e9a4823720660de359bb6 https://www.encodeproject.org/files/ENCFF755GPS/@@download/ENCFF755GPS.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF543FNN bed narrowPeak optimal idr thresholded peaks ENCSR000EGD ChIP-seq EFO:0002067 K562 cell line Homo sapiens BACH1-human ENCAB000AEA DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF063XMG, ENCFF419RSJ, ENCFF755GPS, ENCFF830GYV 88418 ENCODE Processing Pipeline 148db2913335434c4f79f4c04b546a2b https://www.encodeproject.org/files/ENCFF543FNN/@@download/ENCFF543FNN.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF496CZA fastq reads ENCSR490LWA ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CEBPG-human ENCAB728YTO DNA False 2017-04-14 ENCODE 1 1 100 paired-ended 1 ENCFF028NOQ 3584891358 Michael Snyder, Stanford de9c581e7ad0570e07ff5cc2ce1d5cfe SRA:SRR6213855 https://www.encodeproject.org/files/ENCFF496CZA/@@download/ENCFF496CZA.fastq.gz Illumina HiSeq 2000 /files/ENCFF953WVU/ released missing genetic modification characterization missing control alignments ENCFF028NOQ fastq reads ENCSR490LWA ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CEBPG-human ENCAB728YTO DNA False 2017-04-14 ENCODE 1 1 100 paired-ended 2 ENCFF496CZA 3669317513 Michael Snyder, Stanford 63f884298c0232909273095cbe704634 SRA:SRR6213855 https://www.encodeproject.org/files/ENCFF028NOQ/@@download/ENCFF028NOQ.fastq.gz Illumina HiSeq 2000 /files/ENCFF911YKD/ released missing genetic modification characterization missing control alignments ENCFF567TRK fastq reads ENCSR490LWA ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CEBPG-human ENCAB728YTO DNA False 2017-04-14 ENCODE 2 1 100 paired-ended 2 ENCFF392MVW 4447163098 Michael Snyder, Stanford 6b5c3bf5e5c8068f1f8d196ce245d75a SRA:SRR6213856 https://www.encodeproject.org/files/ENCFF567TRK/@@download/ENCFF567TRK.fastq.gz Illumina HiSeq 2000 /files/ENCFF911YKD/ released missing genetic modification characterization missing control alignments ENCFF392MVW fastq reads ENCSR490LWA ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CEBPG-human ENCAB728YTO DNA False 2017-04-14 ENCODE 2 1 100 paired-ended 1 ENCFF567TRK 4383399884 Michael Snyder, Stanford 0453ffcfd0b11fa1441f8e74bf9c70b5 SRA:SRR6213856 https://www.encodeproject.org/files/ENCFF392MVW/@@download/ENCFF392MVW.fastq.gz Illumina HiSeq 2000 /files/ENCFF953WVU/ released missing genetic modification characterization missing control alignments ENCFF303IRP bam unfiltered alignments ENCSR490LWA ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CEBPG-human ENCAB728YTO DNA False 2017-04-14 ENCODE 2 100 ENCFF392MVW, ENCFF567TRK, ENCFF643CGH 9455479317 ENCODE Processing Pipeline ff60b43b5282296b07535f05010e335d https://www.encodeproject.org/files/ENCFF303IRP/@@download/ENCFF303IRP.bam GRCh38 released missing genetic modification characterization missing control alignments ENCFF801LQC bam alignments ENCSR490LWA ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CEBPG-human ENCAB728YTO DNA False 2017-04-14 ENCODE 1 100 ENCFF028NOQ, ENCFF496CZA, ENCFF643CGH 6154385409 ENCODE Processing Pipeline c068f6694bd63cf7cf0b7435f23b74fe https://www.encodeproject.org/files/ENCFF801LQC/@@download/ENCFF801LQC.bam GRCh38 released missing genetic modification characterization missing control alignments ENCFF092XPV bam alignments ENCSR490LWA ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CEBPG-human ENCAB728YTO DNA False 2017-04-14 ENCODE 2 100 ENCFF392MVW, ENCFF567TRK, ENCFF643CGH 7309611198 ENCODE Processing Pipeline 06413cd52bc0f19f74634418447cf64b https://www.encodeproject.org/files/ENCFF092XPV/@@download/ENCFF092XPV.bam GRCh38 released missing genetic modification characterization missing control alignments ENCFF703DBL bam unfiltered alignments ENCSR490LWA ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CEBPG-human ENCAB728YTO DNA False 2017-04-14 ENCODE 1 100 ENCFF028NOQ, ENCFF496CZA, ENCFF643CGH 7899800184 ENCODE Processing Pipeline 246a6864779330f5a131f61cd54fa481 https://www.encodeproject.org/files/ENCFF703DBL/@@download/ENCFF703DBL.bam GRCh38 released missing genetic modification characterization missing control alignments ENCFF158JVR bam unfiltered alignments ENCSR490LWA ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CEBPG-human ENCAB728YTO DNA False 2017-04-14 ENCODE 2 100 ENCFF392MVW, ENCFF567TRK, ENCFF807MUK 9437106522 ENCODE Processing Pipeline 87b00d4c0710197f752e705d6f0a7eb5 https://www.encodeproject.org/files/ENCFF158JVR/@@download/ENCFF158JVR.bam hg19 released missing genetic modification characterization missing control alignments ENCFF244CWH bam unfiltered alignments ENCSR490LWA ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CEBPG-human ENCAB728YTO DNA False 2017-04-14 ENCODE 1 100 ENCFF028NOQ, ENCFF496CZA, ENCFF807MUK 7881597061 ENCODE Processing Pipeline 7a572e7b709b8611d4db72199b0396b2 https://www.encodeproject.org/files/ENCFF244CWH/@@download/ENCFF244CWH.bam hg19 released missing genetic modification characterization missing control alignments ENCFF929HAN bam alignments ENCSR490LWA ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CEBPG-human ENCAB728YTO DNA False 2017-04-14 ENCODE 2 100 ENCFF392MVW, ENCFF567TRK, ENCFF807MUK 7306220624 ENCODE Processing Pipeline 442bef002de0713f089303acdd0faf0c https://www.encodeproject.org/files/ENCFF929HAN/@@download/ENCFF929HAN.bam hg19 released missing genetic modification characterization missing control alignments ENCFF309ASH bam alignments ENCSR490LWA ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CEBPG-human ENCAB728YTO DNA False 2017-04-14 ENCODE 1 100 ENCFF028NOQ, ENCFF496CZA, ENCFF807MUK 6152579785 ENCODE Processing Pipeline edfe044de564c6b47513f2daebdaedd0 https://www.encodeproject.org/files/ENCFF309ASH/@@download/ENCFF309ASH.bam hg19 released missing genetic modification characterization missing control alignments ENCFF272ULO bed narrowPeak optimal idr thresholded peaks ENCSR490LWA ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CEBPG-human ENCAB728YTO DNA False 2017-04-14 ENCODE 1, 2 ENCFF001TDO, ENCFF183FOU, ENCFF335AYY, ENCFF880AEL 839761 ENCODE Processing Pipeline 29d7e21f3c25f41bd7185514faa49553 https://www.encodeproject.org/files/ENCFF272ULO/@@download/ENCFF272ULO.bed.gz hg19 released missing genetic modification characterization missing control alignments ENCFF813YEV bigBed narrowPeak optimal idr thresholded peaks ENCSR490LWA ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CEBPG-human ENCAB728YTO DNA False 2017-04-14 ENCODE 1, 2 ENCFF272ULO 1659022 ENCODE Processing Pipeline e392bd9673ff78c11b12ed83aad5c0dc https://www.encodeproject.org/files/ENCFF813YEV/@@download/ENCFF813YEV.bigBed hg19 released missing genetic modification characterization missing control alignments ENCFF710RTW bigWig signal p-value ENCSR490LWA ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CEBPG-human ENCAB728YTO DNA False 2017-04-14 ENCODE 1, 2 ENCFF092XPV, ENCFF801LQC 2000035391 ENCODE Processing Pipeline 3d92656f45a52c066ba74dbeeeeba87a https://www.encodeproject.org/files/ENCFF710RTW/@@download/ENCFF710RTW.bigWig GRCh38 released missing genetic modification characterization missing control alignments ENCFF833DME bigWig fold change over control ENCSR490LWA ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CEBPG-human ENCAB728YTO DNA False 2017-04-14 ENCODE 1 ENCFF309ASH, ENCFF666KPK 1560513804 ENCODE Processing Pipeline 83534f6348fed817773a8a83aadab038 https://www.encodeproject.org/files/ENCFF833DME/@@download/ENCFF833DME.bigWig hg19 released missing genetic modification characterization missing control alignments ENCFF010QMH bigWig fold change over control ENCSR490LWA ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CEBPG-human ENCAB728YTO DNA False 2017-04-14 ENCODE 2 ENCFF666KPK, ENCFF929HAN 1720571524 ENCODE Processing Pipeline 26cc5be71da37c9cad18e45010a58302 https://www.encodeproject.org/files/ENCFF010QMH/@@download/ENCFF010QMH.bigWig hg19 released missing genetic modification characterization missing control alignments ENCFF183FOU bed narrowPeak peaks ENCSR490LWA ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CEBPG-human ENCAB728YTO DNA False 2017-04-14 ENCODE 2 ENCFF666KPK, ENCFF929HAN 7199777 ENCODE Processing Pipeline bad146c1707938eeacedc3cfa7174b29 https://www.encodeproject.org/files/ENCFF183FOU/@@download/ENCFF183FOU.bed.gz hg19 released missing genetic modification characterization missing control alignments ENCFF880AEL bed narrowPeak peaks ENCSR490LWA ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CEBPG-human ENCAB728YTO DNA False 2017-04-14 ENCODE 1, 2 ENCFF309ASH, ENCFF666KPK, ENCFF929HAN 7310147 ENCODE Processing Pipeline 4ca0318ae43ad207a919bf225255991b https://www.encodeproject.org/files/ENCFF880AEL/@@download/ENCFF880AEL.bed.gz hg19 released missing genetic modification characterization missing control alignments ENCFF066XMS bigBed narrowPeak peaks ENCSR490LWA ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CEBPG-human ENCAB728YTO DNA False 2017-04-14 ENCODE 1 ENCFF335AYY 13531898 ENCODE Processing Pipeline f9572c29f972eb350628207915eb883a https://www.encodeproject.org/files/ENCFF066XMS/@@download/ENCFF066XMS.bigBed hg19 released missing genetic modification characterization missing control alignments ENCFF165ZYS bigWig signal p-value ENCSR490LWA ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CEBPG-human ENCAB728YTO DNA False 2017-04-14 ENCODE 2 ENCFF092XPV 1810897319 ENCODE Processing Pipeline f165164026ec538a1f2b6176e914b89e https://www.encodeproject.org/files/ENCFF165ZYS/@@download/ENCFF165ZYS.bigWig GRCh38 released missing genetic modification characterization missing control alignments ENCFF797MRW bed narrowPeak optimal idr thresholded peaks ENCSR490LWA ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CEBPG-human ENCAB728YTO DNA False 2017-04-14 ENCODE 1, 2 ENCFF401GFI, ENCFF419RSJ, ENCFF637YLM, ENCFF875VQM 841645 ENCODE Processing Pipeline d4109884f770228a5eb64a2622e4f30b https://www.encodeproject.org/files/ENCFF797MRW/@@download/ENCFF797MRW.bed.gz GRCh38 released missing genetic modification characterization missing control alignments ENCFF506QIM bigWig signal p-value ENCSR490LWA ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CEBPG-human ENCAB728YTO DNA False 2017-04-14 ENCODE 2 ENCFF666KPK, ENCFF929HAN 1571992845 ENCODE Processing Pipeline 248e72fe266b12a18a1a2fef1eecce96 https://www.encodeproject.org/files/ENCFF506QIM/@@download/ENCFF506QIM.bigWig hg19 released missing genetic modification characterization missing control alignments ENCFF672VRU bigWig signal p-value ENCSR490LWA ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CEBPG-human ENCAB728YTO DNA False 2017-04-14 ENCODE 1, 2 ENCFF309ASH, ENCFF666KPK, ENCFF929HAN 1992879723 ENCODE Processing Pipeline 7068183446fbdfdac65accc720871662 https://www.encodeproject.org/files/ENCFF672VRU/@@download/ENCFF672VRU.bigWig hg19 released missing genetic modification characterization missing control alignments ENCFF540WMP bigWig fold change over control ENCSR490LWA ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CEBPG-human ENCAB728YTO DNA False 2017-04-14 ENCODE 1, 2 ENCFF309ASH, ENCFF666KPK, ENCFF929HAN 2208127363 ENCODE Processing Pipeline 620a9c4a78496503f76fb48a8989b51e https://www.encodeproject.org/files/ENCFF540WMP/@@download/ENCFF540WMP.bigWig hg19 released missing genetic modification characterization missing control alignments ENCFF335AYY bed narrowPeak peaks ENCSR490LWA ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CEBPG-human ENCAB728YTO DNA False 2017-04-14 ENCODE 1 ENCFF309ASH, ENCFF666KPK 7134776 ENCODE Processing Pipeline 7003592965f9b217550bb6548c2dd4f1 https://www.encodeproject.org/files/ENCFF335AYY/@@download/ENCFF335AYY.bed.gz hg19 released missing genetic modification characterization missing control alignments ENCFF204VBC bigBed narrowPeak peaks ENCSR490LWA ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CEBPG-human ENCAB728YTO DNA False 2017-04-14 ENCODE 2 ENCFF183FOU 13691926 ENCODE Processing Pipeline c2c7ebc0f6d03c70012f3fc76c3a2056 https://www.encodeproject.org/files/ENCFF204VBC/@@download/ENCFF204VBC.bigBed hg19 released missing genetic modification characterization missing control alignments ENCFF709MOC bigBed narrowPeak peaks ENCSR490LWA ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CEBPG-human ENCAB728YTO DNA False 2017-04-14 ENCODE 1, 2 ENCFF880AEL 13705198 ENCODE Processing Pipeline 359275a6986e677ad20d0fb8a8d7604b https://www.encodeproject.org/files/ENCFF709MOC/@@download/ENCFF709MOC.bigBed hg19 released missing genetic modification characterization missing control alignments ENCFF674WGB bed narrowPeak conservative idr thresholded peaks ENCSR490LWA ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CEBPG-human ENCAB728YTO DNA False 2017-04-14 ENCODE 1, 2 ENCFF001TDO, ENCFF183FOU, ENCFF335AYY, ENCFF880AEL 734107 ENCODE Processing Pipeline aa6eeaf78f1fbb224fd42ca73c50a831 https://www.encodeproject.org/files/ENCFF674WGB/@@download/ENCFF674WGB.bed.gz hg19 released missing genetic modification characterization missing control alignments ENCFF999WJP bigBed narrowPeak conservative idr thresholded peaks ENCSR490LWA ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CEBPG-human ENCAB728YTO DNA False 2017-04-14 ENCODE 1, 2 ENCFF674WGB 1495402 ENCODE Processing Pipeline 58e722822fd609eea45d7a0ee1e65c77 https://www.encodeproject.org/files/ENCFF999WJP/@@download/ENCFF999WJP.bigBed hg19 released missing genetic modification characterization missing control alignments ENCFF396YAY bigWig signal p-value ENCSR490LWA ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CEBPG-human ENCAB728YTO DNA False 2017-04-14 ENCODE 1 ENCFF309ASH, ENCFF666KPK 1264128674 ENCODE Processing Pipeline 10b8f248aec2910cf46a4f593f657e8b https://www.encodeproject.org/files/ENCFF396YAY/@@download/ENCFF396YAY.bigWig hg19 released missing genetic modification characterization missing control alignments ENCFF401GFI bed narrowPeak peaks ENCSR490LWA ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CEBPG-human ENCAB728YTO DNA False 2017-04-14 ENCODE 2 ENCFF092XPV 7119297 ENCODE Processing Pipeline f65da31c713ff3f15222dbcdfcffbea9 https://www.encodeproject.org/files/ENCFF401GFI/@@download/ENCFF401GFI.bed.gz GRCh38 released missing genetic modification characterization missing control alignments ENCFF875VQM bed narrowPeak peaks ENCSR490LWA ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CEBPG-human ENCAB728YTO DNA False 2017-04-14 ENCODE 1, 2 ENCFF092XPV, ENCFF801LQC 7281778 ENCODE Processing Pipeline a0d005e89242b10a6ef7e7328289427b https://www.encodeproject.org/files/ENCFF875VQM/@@download/ENCFF875VQM.bed.gz GRCh38 released missing genetic modification characterization missing control alignments ENCFF638SAT bed narrowPeak conservative idr thresholded peaks ENCSR490LWA ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CEBPG-human ENCAB728YTO DNA False 2017-04-14 ENCODE 1, 2 ENCFF401GFI, ENCFF419RSJ, ENCFF637YLM, ENCFF875VQM 722413 ENCODE Processing Pipeline e12eefbd6bb8cc4cb216ce3171661a1e https://www.encodeproject.org/files/ENCFF638SAT/@@download/ENCFF638SAT.bed.gz GRCh38 released missing genetic modification characterization missing control alignments ENCFF295KBC bigWig signal p-value ENCSR490LWA ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CEBPG-human ENCAB728YTO DNA False 2017-04-14 ENCODE 1 ENCFF801LQC 1526729091 ENCODE Processing Pipeline 180e6e1b2e62fc594d9f0b5c01677149 https://www.encodeproject.org/files/ENCFF295KBC/@@download/ENCFF295KBC.bigWig GRCh38 released missing genetic modification characterization missing control alignments ENCFF329TBA bigBed narrowPeak optimal idr thresholded peaks ENCSR490LWA ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CEBPG-human ENCAB728YTO DNA False 2017-04-14 ENCODE 1, 2 ENCFF797MRW 1670908 ENCODE Processing Pipeline 920aa7dd92bb8764331cfa044339e96c https://www.encodeproject.org/files/ENCFF329TBA/@@download/ENCFF329TBA.bigBed GRCh38 released missing genetic modification characterization missing control alignments ENCFF422PXH bigWig fold change over control ENCSR490LWA ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CEBPG-human ENCAB728YTO DNA False 2017-04-14 ENCODE 2 ENCFF092XPV 1766286174 ENCODE Processing Pipeline cea4b96b44a668c05ba6455049fd28fd https://www.encodeproject.org/files/ENCFF422PXH/@@download/ENCFF422PXH.bigWig GRCh38 released missing genetic modification characterization missing control alignments ENCFF649LJJ bigWig fold change over control ENCSR490LWA ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CEBPG-human ENCAB728YTO DNA False 2017-04-14 ENCODE 1, 2 ENCFF092XPV, ENCFF801LQC 2212912662 ENCODE Processing Pipeline f9f4ac3bd24b22c28df44defa08fa5bc https://www.encodeproject.org/files/ENCFF649LJJ/@@download/ENCFF649LJJ.bigWig GRCh38 released missing genetic modification characterization missing control alignments ENCFF596OGC bigBed narrowPeak peaks ENCSR490LWA ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CEBPG-human ENCAB728YTO DNA False 2017-04-14 ENCODE 1, 2 ENCFF875VQM 13685163 ENCODE Processing Pipeline e4d763f07a865fbda694957e646977e4 https://www.encodeproject.org/files/ENCFF596OGC/@@download/ENCFF596OGC.bigBed GRCh38 released missing genetic modification characterization missing control alignments ENCFF013BLU bigWig fold change over control ENCSR490LWA ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CEBPG-human ENCAB728YTO DNA False 2017-04-14 ENCODE 1 ENCFF801LQC 1618908819 ENCODE Processing Pipeline a99eeace260443d17a6bc90b9d3b0a4b https://www.encodeproject.org/files/ENCFF013BLU/@@download/ENCFF013BLU.bigWig GRCh38 released missing genetic modification characterization missing control alignments ENCFF637YLM bed narrowPeak peaks ENCSR490LWA ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CEBPG-human ENCAB728YTO DNA False 2017-04-14 ENCODE 1 ENCFF801LQC 7084942 ENCODE Processing Pipeline a6381d775e78814b8726ea3b8d6dd7bc https://www.encodeproject.org/files/ENCFF637YLM/@@download/ENCFF637YLM.bed.gz GRCh38 released missing genetic modification characterization missing control alignments ENCFF903FIF bigBed narrowPeak peaks ENCSR490LWA ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CEBPG-human ENCAB728YTO DNA False 2017-04-14 ENCODE 1 ENCFF637YLM 13488050 ENCODE Processing Pipeline c0c08094a005b6286296b0a11c56db2c https://www.encodeproject.org/files/ENCFF903FIF/@@download/ENCFF903FIF.bigBed GRCh38 released missing genetic modification characterization missing control alignments ENCFF277DTF bigBed narrowPeak peaks ENCSR490LWA ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CEBPG-human ENCAB728YTO DNA False 2017-04-14 ENCODE 2 ENCFF401GFI 13612784 ENCODE Processing Pipeline 0040130f6c181d92cb0351fc70fd8da3 https://www.encodeproject.org/files/ENCFF277DTF/@@download/ENCFF277DTF.bigBed GRCh38 released missing genetic modification characterization missing control alignments ENCFF151GXO bigBed narrowPeak conservative idr thresholded peaks ENCSR490LWA ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CEBPG-human ENCAB728YTO DNA False 2017-04-14 ENCODE 1, 2 ENCFF638SAT 1487104 ENCODE Processing Pipeline 9af319aa7730fbcb461ad33ece9bc595 https://www.encodeproject.org/files/ENCFF151GXO/@@download/ENCFF151GXO.bigBed GRCh38 released missing genetic modification characterization missing control alignments ENCFF132LVW bam unfiltered alignments ENCSR486IFJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ESRRA-human ENCAB000AGE DNA False 2014-07-07 ENCODE 2 100 ENCFF002DOY, ENCFF002DUB, ENCFF807MUK 5558094525 ENCODE Processing Pipeline d7a1e9bfa3d5af89a6a4e8c586d76ba9 https://www.encodeproject.org/files/ENCFF132LVW/@@download/ENCFF132LVW.bam hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF580KTO bam unfiltered alignments ENCSR486IFJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ESRRA-human ENCAB000AGE DNA False 2014-07-07 ENCODE 1 100 ENCFF002DOX, ENCFF002EFV, ENCFF807MUK 5410918561 ENCODE Processing Pipeline e4a0b56fbdb1089986120fb14a4f43be https://www.encodeproject.org/files/ENCFF580KTO/@@download/ENCFF580KTO.bam hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF614QVH bigWig signal p-value ENCSR486IFJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ESRRA-human ENCAB000AGE DNA False 2014-07-07 ENCODE 1 ENCFF581ZJL, ENCFF747PCD 1353740798 ENCODE Processing Pipeline ae9c229520daa71fd63b93a64b8af33f https://www.encodeproject.org/files/ENCFF614QVH/@@download/ENCFF614QVH.bigWig hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF747EPJ bigWig fold change over control ENCSR486IFJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ESRRA-human ENCAB000AGE DNA False 2014-07-07 ENCODE 1 ENCFF581ZJL, ENCFF747PCD 1225404419 ENCODE Processing Pipeline 53a8ebf8f918af930668de8bb19a1c4d https://www.encodeproject.org/files/ENCFF747EPJ/@@download/ENCFF747EPJ.bigWig hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF156TSE bigWig signal p-value ENCSR486IFJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ESRRA-human ENCAB000AGE DNA False 2014-07-07 ENCODE 2 ENCFF051LWI, ENCFF558XOV 895232442 ENCODE Processing Pipeline 517c147b3a23487f6b6dec377ed774c4 https://www.encodeproject.org/files/ENCFF156TSE/@@download/ENCFF156TSE.bigWig hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF002DOX fastq reads ENCSR486IFJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ESRRA-human ENCAB000AGE DNA False 2014-07-07 ENCODE 1 1 100 paired-ended 1 ENCFF002EFV 2525249876 Michael Snyder, Stanford f813ad24c0307841d1ee4c3f440242e6 SRA:SRR5111663 https://www.encodeproject.org/files/ENCFF002DOX/@@download/ENCFF002DOX.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFF/ released low read depth, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF002DOY fastq reads ENCSR486IFJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ESRRA-human ENCAB000AGE DNA False 2014-07-07 ENCODE 2 1 100 paired-ended 2 ENCFF002DUB 2809919720 Michael Snyder, Stanford 97289ae854268e7225a13e2f8830c662 SRA:SRR5111662 https://www.encodeproject.org/files/ENCFF002DOY/@@download/ENCFF002DOY.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFA/ released low read depth, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF002DUB fastq reads ENCSR486IFJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ESRRA-human ENCAB000AGE DNA False 2014-07-07 ENCODE 2 1 100 paired-ended 1 ENCFF002DOY 2649620327 Michael Snyder, Stanford 09270afe17f979bf8adcf2919447466d SRA:SRR5111662 https://www.encodeproject.org/files/ENCFF002DUB/@@download/ENCFF002DUB.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFD/ released low read depth, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF002EFV fastq reads ENCSR486IFJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ESRRA-human ENCAB000AGE DNA False 2014-07-07 ENCODE 1 1 100 paired-ended 2 ENCFF002DOX 2536024177 Michael Snyder, Stanford 4ab7b9bcdca066f9e78596ba3b6504f0 SRA:SRR5111663 https://www.encodeproject.org/files/ENCFF002EFV/@@download/ENCFF002EFV.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFH/ released low read depth, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF398XLB bigWig fold change over control ENCSR486IFJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ESRRA-human ENCAB000AGE DNA False 2014-07-07 ENCODE 2 ENCFF051LWI, ENCFF558XOV 1046833057 ENCODE Processing Pipeline 10fdb4b999a2a16e441b55ca0e655509 https://www.encodeproject.org/files/ENCFF398XLB/@@download/ENCFF398XLB.bigWig hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF406YGF bed narrowPeak peaks ENCSR486IFJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ESRRA-human ENCAB000AGE DNA False 2014-07-07 ENCODE 1 ENCFF581ZJL, ENCFF747PCD 6755518 ENCODE Processing Pipeline a33ae1367f5f7bff47dd2433ef6bd489 https://www.encodeproject.org/files/ENCFF406YGF/@@download/ENCFF406YGF.bed.gz hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF106AUG bed narrowPeak peaks ENCSR486IFJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ESRRA-human ENCAB000AGE DNA False 2014-07-07 ENCODE 1, 2 ENCFF051LWI, ENCFF558XOV, ENCFF581ZJL, ENCFF747PCD 7204811 ENCODE Processing Pipeline 7712c24501609fb0624096c2ac30e2d1 https://www.encodeproject.org/files/ENCFF106AUG/@@download/ENCFF106AUG.bed.gz hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF619KMH bed narrowPeak peaks ENCSR486IFJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ESRRA-human ENCAB000AGE DNA False 2014-07-07 ENCODE 2 ENCFF051LWI, ENCFF558XOV 6785961 ENCODE Processing Pipeline 490afc63a5af3a432f36dcda78a69445 https://www.encodeproject.org/files/ENCFF619KMH/@@download/ENCFF619KMH.bed.gz hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF887UDO bigBed narrowPeak peaks ENCSR486IFJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ESRRA-human ENCAB000AGE DNA False 2014-07-07 ENCODE 1 ENCFF406YGF 13251828 ENCODE Processing Pipeline 77495e3535f1d20d4fc02e1bbed3fadd https://www.encodeproject.org/files/ENCFF887UDO/@@download/ENCFF887UDO.bigBed hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF949CDR bigBed narrowPeak conservative idr thresholded peaks ENCSR486IFJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ESRRA-human ENCAB000AGE DNA False 2014-07-07 ENCODE 1, 2 ENCFF200PMR 858390 ENCODE Processing Pipeline 16c4e2b4d5e20d5f444b5c04f8194c69 https://www.encodeproject.org/files/ENCFF949CDR/@@download/ENCFF949CDR.bigBed hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF956RQC bigBed narrowPeak peaks ENCSR486IFJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ESRRA-human ENCAB000AGE DNA False 2014-07-07 ENCODE 2 ENCFF619KMH 13210083 ENCODE Processing Pipeline e05bbd4ab156c0c4e7a168630f5ff5a4 https://www.encodeproject.org/files/ENCFF956RQC/@@download/ENCFF956RQC.bigBed hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF366VZT bigBed narrowPeak peaks ENCSR486IFJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ESRRA-human ENCAB000AGE DNA False 2014-07-07 ENCODE 1, 2 ENCFF106AUG 13110998 ENCODE Processing Pipeline 0436f4356572095bd86ad6552fb56ed4 https://www.encodeproject.org/files/ENCFF366VZT/@@download/ENCFF366VZT.bigBed hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF200PMR bed narrowPeak conservative idr thresholded peaks ENCSR486IFJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ESRRA-human ENCAB000AGE DNA False 2014-07-07 ENCODE 1, 2 ENCFF001TDO, ENCFF106AUG, ENCFF406YGF, ENCFF619KMH 412477 ENCODE Processing Pipeline 094488edba74574e5728b916bf77840a https://www.encodeproject.org/files/ENCFF200PMR/@@download/ENCFF200PMR.bed.gz hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF213EPU bed narrowPeak optimal idr thresholded peaks ENCSR486IFJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ESRRA-human ENCAB000AGE DNA False 2014-07-07 ENCODE 1, 2 ENCFF001TDO, ENCFF106AUG, ENCFF406YGF, ENCFF619KMH 592333 ENCODE Processing Pipeline bfd05e28fd40d1e2a57b194812d2950e https://www.encodeproject.org/files/ENCFF213EPU/@@download/ENCFF213EPU.bed.gz hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF565QWK bigBed narrowPeak optimal idr thresholded peaks ENCSR486IFJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ESRRA-human ENCAB000AGE DNA False 2014-07-07 ENCODE 1, 2 ENCFF213EPU 1149743 ENCODE Processing Pipeline 0eec3747aa5a0b42e6cc38ce5fc9989a https://www.encodeproject.org/files/ENCFF565QWK/@@download/ENCFF565QWK.bigBed hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF747PCD bam alignments ENCSR486IFJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ESRRA-human ENCAB000AGE DNA False 2014-07-07 ENCODE 1 100 ENCFF002DOX, ENCFF002EFV, ENCFF807MUK 4592581668 ENCODE Processing Pipeline 6b7cf9f68fe1cd540ecb9abed51eec8a https://www.encodeproject.org/files/ENCFF747PCD/@@download/ENCFF747PCD.bam hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF558XOV bam alignments ENCSR486IFJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ESRRA-human ENCAB000AGE DNA False 2014-07-07 ENCODE 2 100 ENCFF002DOY, ENCFF002DUB, ENCFF807MUK 3483369737 ENCODE Processing Pipeline 8d2aca8ca825423d0b8cc9da8853b4e9 https://www.encodeproject.org/files/ENCFF558XOV/@@download/ENCFF558XOV.bam hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF361KMY bigWig signal p-value ENCSR486IFJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ESRRA-human ENCAB000AGE DNA False 2014-07-07 ENCODE 1, 2 ENCFF051LWI, ENCFF558XOV, ENCFF581ZJL, ENCFF747PCD 2098183319 ENCODE Processing Pipeline 565b0252222104291f56f12d91f76d52 https://www.encodeproject.org/files/ENCFF361KMY/@@download/ENCFF361KMY.bigWig hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF301HQP bigWig signal p-value ENCSR486IFJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ESRRA-human ENCAB000AGE DNA False 2014-07-07 ENCODE 1 ENCFF581ZJL, ENCFF747PCD 1362115365 ENCODE Processing Pipeline 2f2fc216bf23425a368b01b856b1b01d https://www.encodeproject.org/files/ENCFF301HQP/@@download/ENCFF301HQP.bigWig hg19 archived low read depth, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF012QEQ bigWig signal p-value ENCSR486IFJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ESRRA-human ENCAB000AGE DNA False 2014-07-07 ENCODE 2 ENCFF051LWI, ENCFF558XOV 889270284 ENCODE Processing Pipeline 2e2f8400f06f8ce82270f056f9c1bebc https://www.encodeproject.org/files/ENCFF012QEQ/@@download/ENCFF012QEQ.bigWig hg19 archived low read depth, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF700UMU bigWig fold change over control ENCSR486IFJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ESRRA-human ENCAB000AGE DNA False 2014-07-07 ENCODE 1 ENCFF581ZJL, ENCFF747PCD 1230819041 ENCODE Processing Pipeline 273998d61a860944c17531808c636624 https://www.encodeproject.org/files/ENCFF700UMU/@@download/ENCFF700UMU.bigWig hg19 archived low read depth, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF838HZG bigWig fold change over control ENCSR486IFJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ESRRA-human ENCAB000AGE DNA False 2014-07-07 ENCODE 2 ENCFF051LWI, ENCFF558XOV 1039305229 ENCODE Processing Pipeline 1fe42bc99d3865f965238e5331e7c87b https://www.encodeproject.org/files/ENCFF838HZG/@@download/ENCFF838HZG.bigWig hg19 archived low read depth, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF827COK bigWig fold change over control ENCSR486IFJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ESRRA-human ENCAB000AGE DNA False 2014-07-07 ENCODE 1, 2 ENCFF051LWI, ENCFF558XOV, ENCFF581ZJL, ENCFF747PCD 2084250918 ENCODE Processing Pipeline 116c167503e1d4e44866802e18d2bbff https://www.encodeproject.org/files/ENCFF827COK/@@download/ENCFF827COK.bigWig hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF313UKE bed narrowPeak peaks ENCSR486IFJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ESRRA-human ENCAB000AGE DNA False 2014-07-07 ENCODE 1 ENCFF581ZJL, ENCFF747PCD 6812372 ENCODE Processing Pipeline 85ba7f28c130cc201d5bef20fda3226d https://www.encodeproject.org/files/ENCFF313UKE/@@download/ENCFF313UKE.bed.gz hg19 archived low read depth, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF122FWH bed narrowPeak peaks ENCSR486IFJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ESRRA-human ENCAB000AGE DNA False 2014-07-07 ENCODE 2 ENCFF051LWI, ENCFF558XOV 6858089 ENCODE Processing Pipeline 9cd613d51d776b7ba4ac1c3f13831780 https://www.encodeproject.org/files/ENCFF122FWH/@@download/ENCFF122FWH.bed.gz hg19 archived low read depth, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF447EKH bigBed narrowPeak peaks ENCSR486IFJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ESRRA-human ENCAB000AGE DNA False 2014-07-07 ENCODE 1 ENCFF313UKE 13264659 ENCODE Processing Pipeline 7494de9581f5ef85508f5221a494f6cc https://www.encodeproject.org/files/ENCFF447EKH/@@download/ENCFF447EKH.bigBed hg19 archived low read depth, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF067SOB bigBed narrowPeak peaks ENCSR486IFJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ESRRA-human ENCAB000AGE DNA False 2014-07-07 ENCODE 1, 2 ENCFF240NFK 13120669 ENCODE Processing Pipeline a79657036190e90c01c25491cbb4ba7d https://www.encodeproject.org/files/ENCFF067SOB/@@download/ENCFF067SOB.bigBed hg19 archived low read depth, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF240NFK bed narrowPeak peaks ENCSR486IFJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ESRRA-human ENCAB000AGE DNA False 2014-07-07 ENCODE 1, 2 ENCFF051LWI, ENCFF558XOV, ENCFF581ZJL, ENCFF747PCD 7214480 ENCODE Processing Pipeline 511fdf36f68b74570878b1c8145fa532 https://www.encodeproject.org/files/ENCFF240NFK/@@download/ENCFF240NFK.bed.gz hg19 archived low read depth, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF522CEZ bigBed narrowPeak peaks ENCSR486IFJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ESRRA-human ENCAB000AGE DNA False 2014-07-07 ENCODE 2 ENCFF122FWH 13216272 ENCODE Processing Pipeline c9ed22dfa05d2f7550a639f4209ba3ac https://www.encodeproject.org/files/ENCFF522CEZ/@@download/ENCFF522CEZ.bigBed hg19 archived low read depth, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF957ZDE bam unfiltered alignments ENCSR486IFJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ESRRA-human ENCAB000AGE DNA False 2014-07-07 ENCODE 1 100 ENCFF002DOX, ENCFF002EFV, ENCFF643CGH 5414575747 ENCODE Processing Pipeline 7bfa08b1e7c2f79f7c72fe35675d4dd4 https://www.encodeproject.org/files/ENCFF957ZDE/@@download/ENCFF957ZDE.bam GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF469LYX bam unfiltered alignments ENCSR486IFJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ESRRA-human ENCAB000AGE DNA False 2014-07-07 ENCODE 2 100 ENCFF002DOY, ENCFF002DUB, ENCFF643CGH 5558822585 ENCODE Processing Pipeline 696e8a300ec9f432b31a52288a45bd77 https://www.encodeproject.org/files/ENCFF469LYX/@@download/ENCFF469LYX.bam GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF857YYV bam alignments ENCSR486IFJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ESRRA-human ENCAB000AGE DNA False 2014-07-07 ENCODE 1 100 ENCFF002DOX, ENCFF002EFV, ENCFF643CGH 4592759306 ENCODE Processing Pipeline c22d5b07b53c9cd0ea95e87f412230df https://www.encodeproject.org/files/ENCFF857YYV/@@download/ENCFF857YYV.bam GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF320WXN bam alignments ENCSR486IFJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ESRRA-human ENCAB000AGE DNA False 2014-07-07 ENCODE 2 100 ENCFF002DOY, ENCFF002DUB, ENCFF643CGH 3484102889 ENCODE Processing Pipeline c250c488144405fe51d4ace719921dbf https://www.encodeproject.org/files/ENCFF320WXN/@@download/ENCFF320WXN.bam GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF402PFN bigWig signal p-value ENCSR486IFJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ESRRA-human ENCAB000AGE DNA False 2014-07-07 ENCODE 1 ENCFF857YYV 1285479388 ENCODE Processing Pipeline 72e8704dbac70d0d6c15c6681a32080c https://www.encodeproject.org/files/ENCFF402PFN/@@download/ENCFF402PFN.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF978QFJ bigWig signal p-value ENCSR486IFJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ESRRA-human ENCAB000AGE DNA False 2014-07-07 ENCODE 2 ENCFF320WXN 960761982 ENCODE Processing Pipeline 5df610fd192561b04032361e903b0ba5 https://www.encodeproject.org/files/ENCFF978QFJ/@@download/ENCFF978QFJ.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF708ZYK bigWig signal p-value ENCSR486IFJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ESRRA-human ENCAB000AGE DNA False 2014-07-07 ENCODE 1, 2 ENCFF320WXN, ENCFF857YYV 1631111253 ENCODE Processing Pipeline 573987e61610641e21abec800d58493c https://www.encodeproject.org/files/ENCFF708ZYK/@@download/ENCFF708ZYK.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF194PEZ bigWig fold change over control ENCSR486IFJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ESRRA-human ENCAB000AGE DNA False 2014-07-07 ENCODE 1 ENCFF857YYV 1236282386 ENCODE Processing Pipeline d6c2864f25ee4c478ce8a875989ef0da https://www.encodeproject.org/files/ENCFF194PEZ/@@download/ENCFF194PEZ.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF515CCA bigWig fold change over control ENCSR486IFJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ESRRA-human ENCAB000AGE DNA False 2014-07-07 ENCODE 2 ENCFF320WXN 1047654443 ENCODE Processing Pipeline 284c42892a7aae501f37ebf5ad763ef4 https://www.encodeproject.org/files/ENCFF515CCA/@@download/ENCFF515CCA.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF241ISR bigWig fold change over control ENCSR486IFJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ESRRA-human ENCAB000AGE DNA False 2014-07-07 ENCODE 1, 2 ENCFF320WXN, ENCFF857YYV 2057518111 ENCODE Processing Pipeline 7e5018ad15c5bbda3bd15549f32ce172 https://www.encodeproject.org/files/ENCFF241ISR/@@download/ENCFF241ISR.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF936WPW bed narrowPeak peaks ENCSR486IFJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ESRRA-human ENCAB000AGE DNA False 2014-07-07 ENCODE 1 ENCFF857YYV 6812175 ENCODE Processing Pipeline e7f4b0c75e14fbd99a48dadaec25ac20 https://www.encodeproject.org/files/ENCFF936WPW/@@download/ENCFF936WPW.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF833IMP bed narrowPeak peaks ENCSR486IFJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ESRRA-human ENCAB000AGE DNA False 2014-07-07 ENCODE 2 ENCFF320WXN 6773022 ENCODE Processing Pipeline 161f9074b0ad77ad6b09990f6a0d57a3 https://www.encodeproject.org/files/ENCFF833IMP/@@download/ENCFF833IMP.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF944XDI bed narrowPeak peaks ENCSR486IFJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ESRRA-human ENCAB000AGE DNA False 2014-07-07 ENCODE 1, 2 ENCFF320WXN, ENCFF857YYV 7167898 ENCODE Processing Pipeline 3e3fce687a5de40c4f8e897f39351a9a https://www.encodeproject.org/files/ENCFF944XDI/@@download/ENCFF944XDI.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF702ZMK bigBed narrowPeak peaks ENCSR486IFJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ESRRA-human ENCAB000AGE DNA False 2014-07-07 ENCODE 1 ENCFF936WPW 13369853 ENCODE Processing Pipeline 3dd73528611419b8b3af023c366ebe5f https://www.encodeproject.org/files/ENCFF702ZMK/@@download/ENCFF702ZMK.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF582GLY bigBed narrowPeak peaks ENCSR486IFJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ESRRA-human ENCAB000AGE DNA False 2014-07-07 ENCODE 2 ENCFF833IMP 13240183 ENCODE Processing Pipeline 549cbde6cfd9730a550aa6b7acb823be https://www.encodeproject.org/files/ENCFF582GLY/@@download/ENCFF582GLY.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF131CZW bigBed narrowPeak peaks ENCSR486IFJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ESRRA-human ENCAB000AGE DNA False 2014-07-07 ENCODE 1, 2 ENCFF944XDI 13073040 ENCODE Processing Pipeline 5138455089c56f60bf78192ec2ce0fa2 https://www.encodeproject.org/files/ENCFF131CZW/@@download/ENCFF131CZW.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF038PPG bed narrowPeak conservative idr thresholded peaks ENCSR486IFJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ESRRA-human ENCAB000AGE DNA False 2014-07-07 ENCODE 1, 2 ENCFF419RSJ, ENCFF833IMP, ENCFF936WPW, ENCFF944XDI 400835 ENCODE Processing Pipeline b454808d7e4189ea74ef12d1ad33b5a2 https://www.encodeproject.org/files/ENCFF038PPG/@@download/ENCFF038PPG.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF068EOO bigBed narrowPeak conservative idr thresholded peaks ENCSR486IFJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ESRRA-human ENCAB000AGE DNA False 2014-07-07 ENCODE 1, 2 ENCFF038PPG 841477 ENCODE Processing Pipeline 649c4402d370b8bb0ee6c1e4f352214e https://www.encodeproject.org/files/ENCFF068EOO/@@download/ENCFF068EOO.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF592GWM bed narrowPeak optimal idr thresholded peaks ENCSR486IFJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ESRRA-human ENCAB000AGE DNA False 2014-07-07 ENCODE 1, 2 ENCFF419RSJ, ENCFF833IMP, ENCFF936WPW, ENCFF944XDI 581507 ENCODE Processing Pipeline 9c784f26d319aa77a01800ad900d28ba https://www.encodeproject.org/files/ENCFF592GWM/@@download/ENCFF592GWM.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF782FZC bigBed narrowPeak optimal idr thresholded peaks ENCSR486IFJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ESRRA-human ENCAB000AGE DNA False 2014-07-07 ENCODE 1, 2 ENCFF592GWM 1135343 ENCODE Processing Pipeline 0503d124d7bf7bb803dac300bc4ea7d6 https://www.encodeproject.org/files/ENCFF782FZC/@@download/ENCFF782FZC.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF602OKQ bed narrowPeak optimal idr thresholded peaks ENCSR486IFJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ESRRA-human ENCAB000AGE DNA False 2014-07-07 ENCODE 1, 2 ENCFF001TDO, ENCFF122FWH, ENCFF240NFK, ENCFF313UKE 520809 ENCODE Processing Pipeline 03db0bf5bd21f1912d550e6072f5ece4 https://www.encodeproject.org/files/ENCFF602OKQ/@@download/ENCFF602OKQ.bed.gz hg19 archived low read depth, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF058HGE bed narrowPeak conservative idr thresholded peaks ENCSR486IFJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ESRRA-human ENCAB000AGE DNA False 2014-07-07 ENCODE 1, 2 ENCFF001TDO, ENCFF122FWH, ENCFF240NFK, ENCFF313UKE 353314 ENCODE Processing Pipeline 54f82fe70fabe92fa9bd9bb44295a1dd https://www.encodeproject.org/files/ENCFF058HGE/@@download/ENCFF058HGE.bed.gz hg19 archived low read depth, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF019TYK bigBed narrowPeak conservative idr thresholded peaks ENCSR486IFJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ESRRA-human ENCAB000AGE DNA False 2014-07-07 ENCODE 1, 2 ENCFF058HGE 780501 ENCODE Processing Pipeline 52e593e73851e933596f0c9f63aa1b37 https://www.encodeproject.org/files/ENCFF019TYK/@@download/ENCFF019TYK.bigBed hg19 archived low read depth, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF005PFN bigBed narrowPeak optimal idr thresholded peaks ENCSR486IFJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ESRRA-human ENCAB000AGE DNA False 2014-07-07 ENCODE 1, 2 ENCFF602OKQ 1043514 ENCODE Processing Pipeline 87d58961ab615feaad090e8314ab2d6a https://www.encodeproject.org/files/ENCFF005PFN/@@download/ENCFF005PFN.bigBed hg19 archived low read depth, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF000YKV bam alignments ENCSR000FAG ChIP-seq EFO:0002067 K562 cell line Homo sapiens MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 1 ENCFF000YMC 231692987 Sherman Weissman, Yale 205d55e12f2503bc870fbdae15e5ca16 https://www.encodeproject.org/files/ENCFF000YKV/@@download/ENCFF000YKV.bam hg19 released biological replicates with identical biosample insufficient read length ENCFF000YKW bam alignments ENCSR000FAG ChIP-seq EFO:0002067 K562 cell line Homo sapiens MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 2 ENCFF000YMB 219495782 Sherman Weissman, Yale 44bf30c30070e31cb3ab2a7691e8457c https://www.encodeproject.org/files/ENCFF000YKW/@@download/ENCFF000YKW.bam hg19 released biological replicates with identical biosample insufficient read length ENCFF000YKX bigBed narrowPeak peaks ENCSR000FAG ChIP-seq EFO:0002067 K562 cell line Homo sapiens MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE ENCFF001VMV 240738 Sherman Weissman, Yale ae49a9ae8ae17802cec7b4bacf77a766 https://www.encodeproject.org/files/ENCFF000YKX/@@download/ENCFF000YKX.bigBed hg19 released biological replicates with identical biosample insufficient read length ENCFF000YKY bigWig signal ENCSR000FAG ChIP-seq EFO:0002067 K562 cell line Homo sapiens MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 299593468 Sherman Weissman, Yale 3caa9f54f61e6869fc479d176606aa57 https://www.encodeproject.org/files/ENCFF000YKY/@@download/ENCFF000YKY.bigWig hg19 released biological replicates with identical biosample, missing derived_from insufficient read length ENCFF000YMB fastq reads ENCSR000FAG ChIP-seq EFO:0002067 K562 cell line Homo sapiens MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 2 1 27 single-ended 174254607 Sherman Weissman, Yale b40e033b7d0bba1374acb2e4ee0c7a5f https://www.encodeproject.org/files/ENCFF000YMB/@@download/ENCFF000YMB.fastq.gz Illumina Genome Analyzer released biological replicates with identical biosample insufficient read length, missing controlled_by ENCFF000YMC fastq reads ENCSR000FAG ChIP-seq EFO:0002067 K562 cell line Homo sapiens MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 1 1 27 single-ended 180747037 Sherman Weissman, Yale 0ce17e223a1f56d01e48bc66a4eed849 https://www.encodeproject.org/files/ENCFF000YMC/@@download/ENCFF000YMC.fastq.gz Illumina Genome Analyzer released biological replicates with identical biosample insufficient read length, missing controlled_by ENCFF001VMV bed narrowPeak peaks ENCSR000FAG ChIP-seq EFO:0002067 K562 cell line Homo sapiens MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 79114 Sherman Weissman, Yale 17c3632f80445408b56fef214358cd6a https://www.encodeproject.org/files/ENCFF001VMV/@@download/ENCFF001VMV.bed.gz hg19 released biological replicates with identical biosample, missing derived_from insufficient read length ENCFF002CWI bed narrowPeak optimal idr thresholded peaks ENCSR000FAG ChIP-seq EFO:0002067 K562 cell line Homo sapiens MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 100566 ENCODE Consortium Analysis Working Group dc7b2f11aa6ce545fdba1c08dc21c233 https://www.encodeproject.org/files/ENCFF002CWI/@@download/ENCFF002CWI.bed.gz hg19 released biological replicates with identical biosample, missing derived_from insufficient read length ENCFF004EXR bigBed narrowPeak optimal idr thresholded peaks ENCSR000FAG ChIP-seq EFO:0002067 K562 cell line Homo sapiens MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE ENCFF002CWI 253307 ENCODE Consortium a0b84bf443f60ec40235bd53104daaf0 https://www.encodeproject.org/files/ENCFF004EXR/@@download/ENCFF004EXR.bigBed hg19 released biological replicates with identical biosample insufficient read length ENCFF425OTY fastq reads ENCSR119ULQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA4-human ENCAB793TME DNA False 2018-01-26 ENCODE 1 1 100 paired-ended 1 ENCFF432ECI 3854863366 Michael Snyder, Stanford a7b0fbf537fed0fb2c1bc775df1d1bd1 https://www.encodeproject.org/files/ENCFF425OTY/@@download/ENCFF425OTY.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFF/ released borderline replicate concordance, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF432ECI fastq reads ENCSR119ULQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA4-human ENCAB793TME DNA False 2018-01-26 ENCODE 1 1 100 paired-ended 2 ENCFF425OTY 3857769099 Michael Snyder, Stanford 2a476b8d64d5288883c43e132426529f https://www.encodeproject.org/files/ENCFF432ECI/@@download/ENCFF432ECI.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFH/ released borderline replicate concordance, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF403AAR fastq reads ENCSR119ULQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA4-human ENCAB793TME DNA False 2018-01-26 ENCODE 2 1 100 paired-ended 1 ENCFF783FQX 3003307218 Michael Snyder, Stanford 9b08d3762cdedb2de04e41c4a36ef308 https://www.encodeproject.org/files/ENCFF403AAR/@@download/ENCFF403AAR.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFD/ released borderline replicate concordance, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF783FQX fastq reads ENCSR119ULQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA4-human ENCAB793TME DNA False 2018-01-26 ENCODE 2 1 100 paired-ended 2 ENCFF403AAR 3006087307 Michael Snyder, Stanford 48141a7a9119720756efde8c56d30fab https://www.encodeproject.org/files/ENCFF783FQX/@@download/ENCFF783FQX.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFA/ released borderline replicate concordance, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF891FDY bam unfiltered alignments ENCSR119ULQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA4-human ENCAB793TME DNA False 2018-01-26 ENCODE 2 100 ENCFF403AAR, ENCFF643CGH, ENCFF783FQX 6397578400 ENCODE Processing Pipeline 5dd98aaaeee78f7c0c47bdc18d99aff9 https://www.encodeproject.org/files/ENCFF891FDY/@@download/ENCFF891FDY.bam GRCh38 released borderline replicate concordance, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF296ZSW bam unfiltered alignments ENCSR119ULQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA4-human ENCAB793TME DNA False 2018-01-26 ENCODE 1 100 ENCFF425OTY, ENCFF432ECI, ENCFF643CGH 8185842288 ENCODE Processing Pipeline ebc72bc8a58a888c3367caeaea0eaec4 https://www.encodeproject.org/files/ENCFF296ZSW/@@download/ENCFF296ZSW.bam GRCh38 released borderline replicate concordance, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF958FJQ bam alignments ENCSR119ULQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA4-human ENCAB793TME DNA False 2018-01-26 ENCODE 2 100 ENCFF403AAR, ENCFF643CGH, ENCFF783FQX 4821660093 ENCODE Processing Pipeline e9902ad0aa8630e825e51105af8ba536 https://www.encodeproject.org/files/ENCFF958FJQ/@@download/ENCFF958FJQ.bam GRCh38 released borderline replicate concordance, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF894WFT bam alignments ENCSR119ULQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA4-human ENCAB793TME DNA False 2018-01-26 ENCODE 1 100 ENCFF425OTY, ENCFF432ECI, ENCFF643CGH 6172470631 ENCODE Processing Pipeline c17c42d8193c33abfcab669553bccd6e https://www.encodeproject.org/files/ENCFF894WFT/@@download/ENCFF894WFT.bam GRCh38 released borderline replicate concordance, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF131SMU bigBed narrowPeak peaks ENCSR119ULQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA4-human ENCAB793TME DNA False 2018-01-26 ENCODE 1, 2 ENCFF692EHK 11059611 ENCODE Processing Pipeline 338c5667f9e69201317d83dcfb2d5ca5 https://www.encodeproject.org/files/ENCFF131SMU/@@download/ENCFF131SMU.bigBed GRCh38 released borderline replicate concordance, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF740NGO bigWig signal p-value ENCSR119ULQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA4-human ENCAB793TME DNA False 2018-01-26 ENCODE 1, 2 ENCFF227IZS, ENCFF894WFT, ENCFF910IKB, ENCFF958FJQ 2204299129 ENCODE Processing Pipeline 22012412aa7f76ed903823d643872e78 https://www.encodeproject.org/files/ENCFF740NGO/@@download/ENCFF740NGO.bigWig GRCh38 released borderline replicate concordance, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF977ESB bed narrowPeak peaks ENCSR119ULQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA4-human ENCAB793TME DNA False 2018-01-26 ENCODE 2 ENCFF227IZS, ENCFF958FJQ 6287750 ENCODE Processing Pipeline de152afa92581d408682dc704ad01fe1 https://www.encodeproject.org/files/ENCFF977ESB/@@download/ENCFF977ESB.bed.gz GRCh38 released borderline replicate concordance, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF043NKW bigWig signal p-value ENCSR119ULQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA4-human ENCAB793TME DNA False 2018-01-26 ENCODE 1 ENCFF894WFT, ENCFF910IKB 1391899833 ENCODE Processing Pipeline cf2cab574f9c1cf77e3463e5aa15b08a https://www.encodeproject.org/files/ENCFF043NKW/@@download/ENCFF043NKW.bigWig GRCh38 released borderline replicate concordance, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF206OVQ bigWig signal p-value ENCSR119ULQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA4-human ENCAB793TME DNA False 2018-01-26 ENCODE 2 ENCFF227IZS, ENCFF958FJQ 1110092604 ENCODE Processing Pipeline e707ffa69360ce3acfb51612ca2d13b1 https://www.encodeproject.org/files/ENCFF206OVQ/@@download/ENCFF206OVQ.bigWig GRCh38 released borderline replicate concordance, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF862CTF bed narrowPeak peaks ENCSR119ULQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA4-human ENCAB793TME DNA False 2018-01-26 ENCODE 1 ENCFF894WFT, ENCFF910IKB 6465482 ENCODE Processing Pipeline 541773eeb94e712aaaafb3e2eea81c1a https://www.encodeproject.org/files/ENCFF862CTF/@@download/ENCFF862CTF.bed.gz GRCh38 released borderline replicate concordance, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF541VGR bigBed narrowPeak peaks ENCSR119ULQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA4-human ENCAB793TME DNA False 2018-01-26 ENCODE 2 ENCFF977ESB 11116295 ENCODE Processing Pipeline 942e78974d502656bdb8b29a1947bfdb https://www.encodeproject.org/files/ENCFF541VGR/@@download/ENCFF541VGR.bigBed GRCh38 released borderline replicate concordance, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF938GHN bigBed narrowPeak conservative idr thresholded peaks ENCSR119ULQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA4-human ENCAB793TME DNA False 2018-01-26 ENCODE 1, 2 ENCFF176RLH 97683 ENCODE Processing Pipeline c048f0b1b21f95ef5885fc5fe2b50912 https://www.encodeproject.org/files/ENCFF938GHN/@@download/ENCFF938GHN.bigBed GRCh38 released borderline replicate concordance, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF749HKV bed narrowPeak optimal idr thresholded peaks ENCSR119ULQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA4-human ENCAB793TME DNA False 2018-01-26 ENCODE 1, 2 ENCFF419RSJ, ENCFF692EHK, ENCFF862CTF, ENCFF977ESB 57498 ENCODE Processing Pipeline e8091a198d607ff061a1a8ec86192d37 https://www.encodeproject.org/files/ENCFF749HKV/@@download/ENCFF749HKV.bed.gz GRCh38 released borderline replicate concordance, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF775UHP bigWig fold change over control ENCSR119ULQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA4-human ENCAB793TME DNA False 2018-01-26 ENCODE 1 ENCFF894WFT, ENCFF910IKB 1434420532 ENCODE Processing Pipeline 896a92d331c2f21d309b90da99fc2d18 https://www.encodeproject.org/files/ENCFF775UHP/@@download/ENCFF775UHP.bigWig GRCh38 released borderline replicate concordance, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF835XJJ bigWig fold change over control ENCSR119ULQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA4-human ENCAB793TME DNA False 2018-01-26 ENCODE 1, 2 ENCFF227IZS, ENCFF894WFT, ENCFF910IKB, ENCFF958FJQ 2277371592 ENCODE Processing Pipeline abeff499254a64ffbc1201e5ec38fd03 https://www.encodeproject.org/files/ENCFF835XJJ/@@download/ENCFF835XJJ.bigWig GRCh38 released borderline replicate concordance, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF692EHK bed narrowPeak peaks ENCSR119ULQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA4-human ENCAB793TME DNA False 2018-01-26 ENCODE 1, 2 ENCFF227IZS, ENCFF894WFT, ENCFF910IKB, ENCFF958FJQ 7126853 ENCODE Processing Pipeline 6958cbb77d3761a210caf2770f19cf9c https://www.encodeproject.org/files/ENCFF692EHK/@@download/ENCFF692EHK.bed.gz GRCh38 released borderline replicate concordance, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF981VCQ bigBed narrowPeak optimal idr thresholded peaks ENCSR119ULQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA4-human ENCAB793TME DNA False 2018-01-26 ENCODE 1, 2 ENCFF749HKV 144049 ENCODE Processing Pipeline 71e98a189c5105a1bbd595dcb3fe9ca8 https://www.encodeproject.org/files/ENCFF981VCQ/@@download/ENCFF981VCQ.bigBed GRCh38 released borderline replicate concordance, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF907EFN bigWig fold change over control ENCSR119ULQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA4-human ENCAB793TME DNA False 2018-01-26 ENCODE 2 ENCFF227IZS, ENCFF958FJQ 1215354866 ENCODE Processing Pipeline a71d0bbb675a64d086fc45ddd234ee13 https://www.encodeproject.org/files/ENCFF907EFN/@@download/ENCFF907EFN.bigWig GRCh38 released borderline replicate concordance, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF125HMX bigBed narrowPeak peaks ENCSR119ULQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA4-human ENCAB793TME DNA False 2018-01-26 ENCODE 1 ENCFF862CTF 11149403 ENCODE Processing Pipeline 78680ec1b96b53afeefd8abc6b34cf18 https://www.encodeproject.org/files/ENCFF125HMX/@@download/ENCFF125HMX.bigBed GRCh38 released borderline replicate concordance, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF176RLH bed narrowPeak conservative idr thresholded peaks ENCSR119ULQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA4-human ENCAB793TME DNA False 2018-01-26 ENCODE 1, 2 ENCFF419RSJ, ENCFF692EHK, ENCFF862CTF, ENCFF977ESB 25496 ENCODE Processing Pipeline 928580f21d18e571b974ae9eb85dac7f https://www.encodeproject.org/files/ENCFF176RLH/@@download/ENCFF176RLH.bed.gz GRCh38 released borderline replicate concordance, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF721BQE bam unfiltered alignments ENCSR119ULQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA4-human ENCAB793TME DNA False 2018-01-26 ENCODE 2 100 ENCFF403AAR, ENCFF783FQX, ENCFF807MUK 6394589615 ENCODE Processing Pipeline bc0e94e028666db1aef53877a9eeaf42 https://www.encodeproject.org/files/ENCFF721BQE/@@download/ENCFF721BQE.bam hg19 released borderline replicate concordance, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF021KML bam unfiltered alignments ENCSR119ULQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA4-human ENCAB793TME DNA False 2018-01-26 ENCODE 1 100 ENCFF425OTY, ENCFF432ECI, ENCFF807MUK 8182464564 ENCODE Processing Pipeline e026c224c4b34b2e9383141be0f27cee https://www.encodeproject.org/files/ENCFF021KML/@@download/ENCFF021KML.bam hg19 released borderline replicate concordance, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF139XLL bam alignments ENCSR119ULQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA4-human ENCAB793TME DNA False 2018-01-26 ENCODE 2 100 ENCFF403AAR, ENCFF783FQX, ENCFF807MUK 4819891801 ENCODE Processing Pipeline 9ea7e0c7cf847813c98072e7516e5af0 https://www.encodeproject.org/files/ENCFF139XLL/@@download/ENCFF139XLL.bam hg19 released borderline replicate concordance, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF662JKA bam alignments ENCSR119ULQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA4-human ENCAB793TME DNA False 2018-01-26 ENCODE 1 100 ENCFF425OTY, ENCFF432ECI, ENCFF807MUK 6168359310 ENCODE Processing Pipeline 85a895662ebbbe37453b7bc4965b7f4f https://www.encodeproject.org/files/ENCFF662JKA/@@download/ENCFF662JKA.bam hg19 released borderline replicate concordance, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF370QWE bigWig signal p-value ENCSR119ULQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA4-human ENCAB793TME DNA False 2018-01-26 ENCODE 1 ENCFF581ZJL, ENCFF662JKA 1174234229 ENCODE Processing Pipeline 04cc1668d4c26f0c9c6e5c1ff8b3c2d9 https://www.encodeproject.org/files/ENCFF370QWE/@@download/ENCFF370QWE.bigWig hg19 released borderline replicate concordance, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF004MYR bigWig signal p-value ENCSR119ULQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA4-human ENCAB793TME DNA False 2018-01-26 ENCODE 2 ENCFF051LWI, ENCFF139XLL 994228440 ENCODE Processing Pipeline e7dc1c7f2aa7f4fa0e31bead84ee0ad3 https://www.encodeproject.org/files/ENCFF004MYR/@@download/ENCFF004MYR.bigWig hg19 released borderline replicate concordance, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF674PYA bigWig signal p-value ENCSR119ULQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA4-human ENCAB793TME DNA False 2018-01-26 ENCODE 1, 2 ENCFF051LWI, ENCFF139XLL, ENCFF581ZJL, ENCFF662JKA 2155488929 ENCODE Processing Pipeline 4bcd690b5cc1e3dfabd8ec358a6b5886 https://www.encodeproject.org/files/ENCFF674PYA/@@download/ENCFF674PYA.bigWig hg19 released borderline replicate concordance, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF353VGO bigWig fold change over control ENCSR119ULQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA4-human ENCAB793TME DNA False 2018-01-26 ENCODE 2 ENCFF051LWI, ENCFF139XLL 1213917923 ENCODE Processing Pipeline 5fe118f3f0e6d0626d0b8bee4a673ef3 https://www.encodeproject.org/files/ENCFF353VGO/@@download/ENCFF353VGO.bigWig hg19 released borderline replicate concordance, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF347OPC bed narrowPeak peaks ENCSR119ULQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA4-human ENCAB793TME DNA False 2018-01-26 ENCODE 1 ENCFF581ZJL, ENCFF662JKA 6464701 ENCODE Processing Pipeline f86de4c42db0714237a30fc9780fad85 https://www.encodeproject.org/files/ENCFF347OPC/@@download/ENCFF347OPC.bed.gz hg19 released borderline replicate concordance, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF960NYB bigWig fold change over control ENCSR119ULQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA4-human ENCAB793TME DNA False 2018-01-26 ENCODE 1 ENCFF581ZJL, ENCFF662JKA 1413520135 ENCODE Processing Pipeline 6027b170a4a0352798e8ced8b95905cb https://www.encodeproject.org/files/ENCFF960NYB/@@download/ENCFF960NYB.bigWig hg19 released borderline replicate concordance, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF452BMC bigWig fold change over control ENCSR119ULQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA4-human ENCAB793TME DNA False 2018-01-26 ENCODE 1, 2 ENCFF051LWI, ENCFF139XLL, ENCFF581ZJL, ENCFF662JKA 2287784484 ENCODE Processing Pipeline dc2bf1c881d008e3437060284b0c870d https://www.encodeproject.org/files/ENCFF452BMC/@@download/ENCFF452BMC.bigWig hg19 released borderline replicate concordance, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF048BXR bed narrowPeak peaks ENCSR119ULQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA4-human ENCAB793TME DNA False 2018-01-26 ENCODE 1, 2 ENCFF051LWI, ENCFF139XLL, ENCFF581ZJL, ENCFF662JKA 7122321 ENCODE Processing Pipeline 90d0b0bde2c91fd0e4f211762ca4d2cd https://www.encodeproject.org/files/ENCFF048BXR/@@download/ENCFF048BXR.bed.gz hg19 released borderline replicate concordance, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF074DBO bed narrowPeak conservative idr thresholded peaks ENCSR119ULQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA4-human ENCAB793TME DNA False 2018-01-26 ENCODE 1, 2 ENCFF001TDO, ENCFF048BXR, ENCFF347OPC, ENCFF605EKW 24947 ENCODE Processing Pipeline f6d9be12f02260e779574c8dafc22c5f https://www.encodeproject.org/files/ENCFF074DBO/@@download/ENCFF074DBO.bed.gz hg19 released borderline replicate concordance, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF495CSO bed narrowPeak optimal idr thresholded peaks ENCSR119ULQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA4-human ENCAB793TME DNA False 2018-01-26 ENCODE 1, 2 ENCFF001TDO, ENCFF048BXR, ENCFF347OPC, ENCFF605EKW 59229 ENCODE Processing Pipeline 83e3f77aa68bfdcc985baff44820a155 https://www.encodeproject.org/files/ENCFF495CSO/@@download/ENCFF495CSO.bed.gz hg19 released borderline replicate concordance, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF605EKW bed narrowPeak peaks ENCSR119ULQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA4-human ENCAB793TME DNA False 2018-01-26 ENCODE 2 ENCFF051LWI, ENCFF139XLL 6259856 ENCODE Processing Pipeline 71de1c7e0910843bf3eee383285b2c79 https://www.encodeproject.org/files/ENCFF605EKW/@@download/ENCFF605EKW.bed.gz hg19 released borderline replicate concordance, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF429TOK bigBed narrowPeak peaks ENCSR119ULQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA4-human ENCAB793TME DNA False 2018-01-26 ENCODE 1 ENCFF347OPC 11133346 ENCODE Processing Pipeline a46ff352e2a03bd4ff45670efb27cb3c https://www.encodeproject.org/files/ENCFF429TOK/@@download/ENCFF429TOK.bigBed hg19 released borderline replicate concordance, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF437DMQ bigBed narrowPeak conservative idr thresholded peaks ENCSR119ULQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA4-human ENCAB793TME DNA False 2018-01-26 ENCODE 1, 2 ENCFF074DBO 94931 ENCODE Processing Pipeline e5cdbf4021b838c9e46ee1a44bb7ce41 https://www.encodeproject.org/files/ENCFF437DMQ/@@download/ENCFF437DMQ.bigBed hg19 released borderline replicate concordance, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF163BLS bigBed narrowPeak peaks ENCSR119ULQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA4-human ENCAB793TME DNA False 2018-01-26 ENCODE 2 ENCFF605EKW 11104229 ENCODE Processing Pipeline 3cc45c1ebf28699a7e1b53c61f73059a https://www.encodeproject.org/files/ENCFF163BLS/@@download/ENCFF163BLS.bigBed hg19 released borderline replicate concordance, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF448ZAX bigBed narrowPeak peaks ENCSR119ULQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA4-human ENCAB793TME DNA False 2018-01-26 ENCODE 1, 2 ENCFF048BXR 11043061 ENCODE Processing Pipeline 5b321962737d8da4795f2575640325d5 https://www.encodeproject.org/files/ENCFF448ZAX/@@download/ENCFF448ZAX.bigBed hg19 released borderline replicate concordance, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF638PJM bigBed narrowPeak optimal idr thresholded peaks ENCSR119ULQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA4-human ENCAB793TME DNA False 2018-01-26 ENCODE 1, 2 ENCFF495CSO 170534 ENCODE Processing Pipeline 154733906389e552d321e034bbf28918 https://www.encodeproject.org/files/ENCFF638PJM/@@download/ENCFF638PJM.bigBed hg19 released borderline replicate concordance, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF541HZR bam unfiltered alignments ENCSR189YMA ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-VEZF1-human ENCAB728YTO DNA False 2017-11-08 ENCODE 4 50 ENCFF659NRO, ENCFF807MUK, ENCFF826UNN 1853514371 ENCODE Processing Pipeline 558f6dfb068a829cf68b39040e8cfb67 https://www.encodeproject.org/files/ENCFF541HZR/@@download/ENCFF541HZR.bam hg19 released missing genetic modification characterization experiment not submitted to GEO ENCFF467PUF bam unfiltered alignments ENCSR189YMA ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-VEZF1-human ENCAB728YTO DNA False 2017-11-08 ENCODE 3 50 ENCFF508PNU, ENCFF807MUK, ENCFF875NRZ 1845517743 ENCODE Processing Pipeline f25fddd62cd7636932a6b3c75b14ef8a https://www.encodeproject.org/files/ENCFF467PUF/@@download/ENCFF467PUF.bam hg19 released missing genetic modification characterization experiment not submitted to GEO ENCFF508PNU fastq reads ENCSR189YMA ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-VEZF1-human ENCAB728YTO DNA False 2017-11-08 ENCODE 3 1 50 single-ended 894184527 Kevin White, UChicago ead4d5d51d8fe882391ad29072976d28 https://www.encodeproject.org/files/ENCFF508PNU/@@download/ENCFF508PNU.fastq.gz Illumina HiSeq 2500 /files/ENCFF959MSU/, /files/ENCFF996NMH/ released missing genetic modification characterization experiment not submitted to GEO ENCFF889JMQ fastq reads ENCSR189YMA ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-VEZF1-human ENCAB728YTO DNA False 2017-11-08 ENCODE 2 1 50 single-ended 404281692 Kevin White, UChicago 59b72914a9eb845c59b794aa3964a559 https://www.encodeproject.org/files/ENCFF889JMQ/@@download/ENCFF889JMQ.fastq.gz Illumina HiSeq 2000 /files/ENCFF959MSU/, /files/ENCFF996NMH/ archived missing genetic modification characterization experiment not submitted to GEO ENCFF638EBJ fastq reads ENCSR189YMA ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-VEZF1-human ENCAB728YTO DNA False 2017-11-08 ENCODE 1 1 50 single-ended 476286189 Kevin White, UChicago 7b5b2979fc535bfd4479ad8e922ebc72 https://www.encodeproject.org/files/ENCFF638EBJ/@@download/ENCFF638EBJ.fastq.gz Illumina HiSeq 2000 /files/ENCFF959MSU/, /files/ENCFF996NMH/ archived missing genetic modification characterization experiment not submitted to GEO ENCFF826UNN fastq reads ENCSR189YMA ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-VEZF1-human ENCAB728YTO DNA False 2017-11-08 ENCODE 4 1 50 single-ended 867978981 Kevin White, UChicago 94ae8006b9697f9a13dc2385c69cff1d https://www.encodeproject.org/files/ENCFF826UNN/@@download/ENCFF826UNN.fastq.gz Illumina HiSeq 2000 /files/ENCFF959MSU/, /files/ENCFF996NMH/ released missing genetic modification characterization experiment not submitted to GEO ENCFF415IKH fastq reads ENCSR189YMA ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-VEZF1-human ENCAB728YTO DNA False 2017-11-08 ENCODE 1 1 50 single-ended 548613964 Kevin White, UChicago 490054312ff8573649b49bd74efffa4b https://www.encodeproject.org/files/ENCFF415IKH/@@download/ENCFF415IKH.fastq.gz Illumina HiSeq 2500 /files/ENCFF959MSU/, /files/ENCFF996NMH/ archived missing genetic modification characterization experiment not submitted to GEO ENCFF875NRZ fastq reads ENCSR189YMA ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-VEZF1-human ENCAB728YTO DNA False 2017-11-08 ENCODE 3 1 50 single-ended 872370273 Kevin White, UChicago c4b48c82047713b3106417f70f301dd2 https://www.encodeproject.org/files/ENCFF875NRZ/@@download/ENCFF875NRZ.fastq.gz Illumina HiSeq 2500 /files/ENCFF959MSU/, /files/ENCFF996NMH/ released missing genetic modification characterization experiment not submitted to GEO ENCFF653DBT fastq reads ENCSR189YMA ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-VEZF1-human ENCAB728YTO DNA False 2017-11-08 ENCODE 2 1 50 single-ended 369770306 Kevin White, UChicago ccaa42e1d84a4a862b67f95175f3f3d3 https://www.encodeproject.org/files/ENCFF653DBT/@@download/ENCFF653DBT.fastq.gz Illumina HiSeq 2500 /files/ENCFF959MSU/, /files/ENCFF996NMH/ archived missing genetic modification characterization experiment not submitted to GEO ENCFF659NRO fastq reads ENCSR189YMA ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-VEZF1-human ENCAB728YTO DNA False 2017-11-08 ENCODE 4 1 50 single-ended 981273838 Kevin White, UChicago 45fca901921fe0e46375421407e2c83e https://www.encodeproject.org/files/ENCFF659NRO/@@download/ENCFF659NRO.fastq.gz Illumina HiSeq 2500 /files/ENCFF959MSU/, /files/ENCFF996NMH/ released missing genetic modification characterization experiment not submitted to GEO ENCFF963KBX bam alignments ENCSR189YMA ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-VEZF1-human ENCAB728YTO DNA False 2017-11-08 ENCODE 2 ENCFF653DBT, ENCFF807MUK, ENCFF889JMQ 567364108 ENCODE Processing Pipeline d57957e1c676b1ffba15752fdfca6c60 https://www.encodeproject.org/files/ENCFF963KBX/@@download/ENCFF963KBX.bam hg19 archived missing genetic modification characterization experiment not submitted to GEO ENCFF675RQO bam alignments ENCSR189YMA ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-VEZF1-human ENCAB728YTO DNA False 2017-11-08 ENCODE 4 ENCFF659NRO, ENCFF807MUK, ENCFF826UNN 1370815006 ENCODE Processing Pipeline ae57596e4cb297b40b72bf99b1a69bbf https://www.encodeproject.org/files/ENCFF675RQO/@@download/ENCFF675RQO.bam hg19 released missing genetic modification characterization experiment not submitted to GEO ENCFF357ANO bam alignments ENCSR189YMA ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-VEZF1-human ENCAB728YTO DNA False 2017-11-08 ENCODE 1 ENCFF415IKH, ENCFF638EBJ, ENCFF807MUK 824058912 ENCODE Processing Pipeline f8107e0ca80f359a21b3c12517d87d28 https://www.encodeproject.org/files/ENCFF357ANO/@@download/ENCFF357ANO.bam hg19 archived missing genetic modification characterization experiment not submitted to GEO ENCFF173TQI bam alignments ENCSR189YMA ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-VEZF1-human ENCAB728YTO DNA False 2017-11-08 ENCODE 3 ENCFF508PNU, ENCFF807MUK, ENCFF875NRZ 1418177580 ENCODE Processing Pipeline d6e31c3d3aff86117f0716eb2a14a1bf https://www.encodeproject.org/files/ENCFF173TQI/@@download/ENCFF173TQI.bam hg19 released missing genetic modification characterization experiment not submitted to GEO ENCFF157KSP bam unfiltered alignments ENCSR189YMA ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-VEZF1-human ENCAB728YTO DNA False 2017-11-08 ENCODE 1 50 ENCFF415IKH, ENCFF638EBJ, ENCFF643CGH 1092055563 ENCODE Processing Pipeline f1f3722683acec91819df573f06d7753 https://www.encodeproject.org/files/ENCFF157KSP/@@download/ENCFF157KSP.bam GRCh38 archived missing genetic modification characterization experiment not submitted to GEO ENCFF362OMG bam alignments ENCSR189YMA ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-VEZF1-human ENCAB728YTO DNA False 2017-11-08 ENCODE 1 50 ENCFF415IKH, ENCFF638EBJ, ENCFF643CGH 823614017 ENCODE Processing Pipeline d0347b06e6ebc06445165b3682a3f4f2 https://www.encodeproject.org/files/ENCFF362OMG/@@download/ENCFF362OMG.bam GRCh38 archived missing genetic modification characterization experiment not submitted to GEO ENCFF456GLV bam unfiltered alignments ENCSR189YMA ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-VEZF1-human ENCAB728YTO DNA False 2017-11-08 ENCODE 2 50 ENCFF643CGH, ENCFF653DBT, ENCFF889JMQ 800021155 ENCODE Processing Pipeline d9cc1fe98829138cffb6397af0e3ee6b https://www.encodeproject.org/files/ENCFF456GLV/@@download/ENCFF456GLV.bam GRCh38 archived missing genetic modification characterization experiment not submitted to GEO ENCFF295BFN bam alignments ENCSR189YMA ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-VEZF1-human ENCAB728YTO DNA False 2017-11-08 ENCODE 2 50 ENCFF643CGH, ENCFF653DBT, ENCFF889JMQ 566981592 ENCODE Processing Pipeline 663dd5ab440ce98a736e86376e61a10c https://www.encodeproject.org/files/ENCFF295BFN/@@download/ENCFF295BFN.bam GRCh38 archived missing genetic modification characterization experiment not submitted to GEO ENCFF299ZTR bam unfiltered alignments ENCSR189YMA ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-VEZF1-human ENCAB728YTO DNA False 2017-11-08 ENCODE 4 50 ENCFF643CGH, ENCFF659NRO, ENCFF826UNN 1858523177 ENCODE Processing Pipeline 752d587a19ccb9ace223e0efbba62469 https://www.encodeproject.org/files/ENCFF299ZTR/@@download/ENCFF299ZTR.bam GRCh38 released missing genetic modification characterization experiment not submitted to GEO ENCFF540HZD bam unfiltered alignments ENCSR189YMA ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-VEZF1-human ENCAB728YTO DNA False 2017-11-08 ENCODE 3 50 ENCFF508PNU, ENCFF643CGH, ENCFF875NRZ 1850743456 ENCODE Processing Pipeline a3a3cb889a0fa077ddca4f9aa72945e9 https://www.encodeproject.org/files/ENCFF540HZD/@@download/ENCFF540HZD.bam GRCh38 released missing genetic modification characterization experiment not submitted to GEO ENCFF698KWQ bam alignments ENCSR189YMA ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-VEZF1-human ENCAB728YTO DNA False 2017-11-08 ENCODE 3 50 ENCFF508PNU, ENCFF643CGH, ENCFF875NRZ 1417526938 ENCODE Processing Pipeline 855395168f3337357e5b00bdf5082aea https://www.encodeproject.org/files/ENCFF698KWQ/@@download/ENCFF698KWQ.bam GRCh38 released missing genetic modification characterization experiment not submitted to GEO ENCFF046PED bam alignments ENCSR189YMA ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-VEZF1-human ENCAB728YTO DNA False 2017-11-08 ENCODE 4 50 ENCFF643CGH, ENCFF659NRO, ENCFF826UNN 1370045759 ENCODE Processing Pipeline e373e2c5aab07e6cc74b41a13cd5246c https://www.encodeproject.org/files/ENCFF046PED/@@download/ENCFF046PED.bam GRCh38 released missing genetic modification characterization experiment not submitted to GEO ENCFF700USA bigWig signal p-value ENCSR189YMA ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-VEZF1-human ENCAB728YTO DNA False 2017-11-08 ENCODE 3 ENCFF171NJW, ENCFF173TQI 591114363 ENCODE Processing Pipeline 15e197d1c2919eb3b019f8179c85fb8d https://www.encodeproject.org/files/ENCFF700USA/@@download/ENCFF700USA.bigWig hg19 released missing genetic modification characterization experiment not submitted to GEO ENCFF176ECR bigWig fold change over control ENCSR189YMA ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-VEZF1-human ENCAB728YTO DNA False 2017-11-08 ENCODE 3 ENCFF171NJW, ENCFF173TQI 700462489 ENCODE Processing Pipeline 49bfcbef15c47e3b2dda7935cb0d18ad https://www.encodeproject.org/files/ENCFF176ECR/@@download/ENCFF176ECR.bigWig hg19 released missing genetic modification characterization experiment not submitted to GEO ENCFF769NEX bigWig signal p-value ENCSR189YMA ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-VEZF1-human ENCAB728YTO DNA False 2017-11-08 ENCODE 4 ENCFF171NJW, ENCFF675RQO 685851220 ENCODE Processing Pipeline 44b13a60d4c8455c5143848c65503ace https://www.encodeproject.org/files/ENCFF769NEX/@@download/ENCFF769NEX.bigWig hg19 released missing genetic modification characterization experiment not submitted to GEO ENCFF025ZAO bigWig signal p-value ENCSR189YMA ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-VEZF1-human ENCAB728YTO DNA False 2017-11-08 ENCODE 3, 4 ENCFF171NJW, ENCFF173TQI, ENCFF675RQO 735513635 ENCODE Processing Pipeline 0b8a0926d05afcdb780df8074fb1aa80 https://www.encodeproject.org/files/ENCFF025ZAO/@@download/ENCFF025ZAO.bigWig hg19 released missing genetic modification characterization experiment not submitted to GEO ENCFF037MEA bigWig fold change over control ENCSR189YMA ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-VEZF1-human ENCAB728YTO DNA False 2017-11-08 ENCODE 4 ENCFF171NJW, ENCFF675RQO 691376557 ENCODE Processing Pipeline b267dbce722d35317ccdbe76e89dfced https://www.encodeproject.org/files/ENCFF037MEA/@@download/ENCFF037MEA.bigWig hg19 released missing genetic modification characterization experiment not submitted to GEO ENCFF724WTJ bigWig fold change over control ENCSR189YMA ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-VEZF1-human ENCAB728YTO DNA False 2017-11-08 ENCODE 3, 4 ENCFF171NJW, ENCFF173TQI, ENCFF675RQO 1034749177 ENCODE Processing Pipeline 71617c0b75aeb1c1c786c03865d01b60 https://www.encodeproject.org/files/ENCFF724WTJ/@@download/ENCFF724WTJ.bigWig hg19 released missing genetic modification characterization experiment not submitted to GEO ENCFF568CWO bed narrowPeak peaks ENCSR189YMA ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-VEZF1-human ENCAB728YTO DNA False 2017-11-08 ENCODE 3 ENCFF171NJW, ENCFF173TQI 6811528 ENCODE Processing Pipeline 394c2889bba7b199b817b99f453007ad https://www.encodeproject.org/files/ENCFF568CWO/@@download/ENCFF568CWO.bed.gz hg19 released missing genetic modification characterization experiment not submitted to GEO ENCFF531FSD bed narrowPeak peaks ENCSR189YMA ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-VEZF1-human ENCAB728YTO DNA False 2017-11-08 ENCODE 4 ENCFF171NJW, ENCFF675RQO 6707104 ENCODE Processing Pipeline a7ea640e0c700fecb19d3643ff22f845 https://www.encodeproject.org/files/ENCFF531FSD/@@download/ENCFF531FSD.bed.gz hg19 released missing genetic modification characterization experiment not submitted to GEO ENCFF349KFP bed narrowPeak peaks ENCSR189YMA ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-VEZF1-human ENCAB728YTO DNA False 2017-11-08 ENCODE 3, 4 ENCFF171NJW, ENCFF173TQI, ENCFF675RQO 7099164 ENCODE Processing Pipeline 2d7be435e63707931b45a1add736ed39 https://www.encodeproject.org/files/ENCFF349KFP/@@download/ENCFF349KFP.bed.gz hg19 released missing genetic modification characterization experiment not submitted to GEO ENCFF726QIE bigBed narrowPeak peaks ENCSR189YMA ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-VEZF1-human ENCAB728YTO DNA False 2017-11-08 ENCODE 3 ENCFF568CWO 12838807 ENCODE Processing Pipeline a14c4d576793c53ad7915eafb63eacf1 https://www.encodeproject.org/files/ENCFF726QIE/@@download/ENCFF726QIE.bigBed hg19 released missing genetic modification characterization experiment not submitted to GEO ENCFF085IYN bigBed narrowPeak peaks ENCSR189YMA ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-VEZF1-human ENCAB728YTO DNA False 2017-11-08 ENCODE 4 ENCFF531FSD 12943859 ENCODE Processing Pipeline 999816944646964532bb623702ea97bb https://www.encodeproject.org/files/ENCFF085IYN/@@download/ENCFF085IYN.bigBed hg19 released missing genetic modification characterization experiment not submitted to GEO ENCFF189NDY bigBed narrowPeak peaks ENCSR189YMA ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-VEZF1-human ENCAB728YTO DNA False 2017-11-08 ENCODE 3, 4 ENCFF349KFP 12860083 ENCODE Processing Pipeline f42e6332f3a463680c2d2d1e19bb5323 https://www.encodeproject.org/files/ENCFF189NDY/@@download/ENCFF189NDY.bigBed hg19 released missing genetic modification characterization experiment not submitted to GEO ENCFF053OWV bed narrowPeak conservative idr thresholded peaks ENCSR189YMA ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-VEZF1-human ENCAB728YTO DNA False 2017-11-08 ENCODE 3, 4 ENCFF001TDO, ENCFF349KFP, ENCFF531FSD, ENCFF568CWO 757031 ENCODE Processing Pipeline 58645881530220620efb7100ea18d127 https://www.encodeproject.org/files/ENCFF053OWV/@@download/ENCFF053OWV.bed.gz hg19 released missing genetic modification characterization experiment not submitted to GEO ENCFF148ZOP bigBed narrowPeak conservative idr thresholded peaks ENCSR189YMA ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-VEZF1-human ENCAB728YTO DNA False 2017-11-08 ENCODE 3, 4 ENCFF053OWV 1591506 ENCODE Processing Pipeline af792f6fd47c6451f55dc9bc7a6ecc4d https://www.encodeproject.org/files/ENCFF148ZOP/@@download/ENCFF148ZOP.bigBed hg19 released missing genetic modification characterization experiment not submitted to GEO ENCFF186QUP bed narrowPeak optimal idr thresholded peaks ENCSR189YMA ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-VEZF1-human ENCAB728YTO DNA False 2017-11-08 ENCODE 3, 4 ENCFF001TDO, ENCFF349KFP, ENCFF531FSD, ENCFF568CWO 824002 ENCODE Processing Pipeline e8579645ecac6889f007fbc6d51bd658 https://www.encodeproject.org/files/ENCFF186QUP/@@download/ENCFF186QUP.bed.gz hg19 released missing genetic modification characterization experiment not submitted to GEO ENCFF381CPB bigBed narrowPeak optimal idr thresholded peaks ENCSR189YMA ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-VEZF1-human ENCAB728YTO DNA False 2017-11-08 ENCODE 3, 4 ENCFF186QUP 1714375 ENCODE Processing Pipeline 4fd46ea7c4b2d43cd0f1801c2f717334 https://www.encodeproject.org/files/ENCFF381CPB/@@download/ENCFF381CPB.bigBed hg19 released missing genetic modification characterization experiment not submitted to GEO ENCFF612HIX bigWig signal p-value ENCSR189YMA ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-VEZF1-human ENCAB728YTO DNA False 2017-11-08 ENCODE 3 ENCFF256EBS, ENCFF698KWQ 750738477 ENCODE Processing Pipeline 1bc43fb19f607a41667cea693792d8a8 https://www.encodeproject.org/files/ENCFF612HIX/@@download/ENCFF612HIX.bigWig GRCh38 released missing genetic modification characterization experiment not submitted to GEO ENCFF640VML bigWig fold change over control ENCSR189YMA ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-VEZF1-human ENCAB728YTO DNA False 2017-11-08 ENCODE 3 ENCFF256EBS, ENCFF698KWQ 693941112 ENCODE Processing Pipeline 8472e1952aa8c52a31166fb4181b8f43 https://www.encodeproject.org/files/ENCFF640VML/@@download/ENCFF640VML.bigWig GRCh38 released missing genetic modification characterization experiment not submitted to GEO ENCFF790NDB bigWig signal p-value ENCSR189YMA ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-VEZF1-human ENCAB728YTO DNA False 2017-11-08 ENCODE 4 ENCFF046PED, ENCFF256EBS 555949974 ENCODE Processing Pipeline 9f574a5b4de0e0da7f51d0786e4827ad https://www.encodeproject.org/files/ENCFF790NDB/@@download/ENCFF790NDB.bigWig GRCh38 released missing genetic modification characterization experiment not submitted to GEO ENCFF311KGV bigWig signal p-value ENCSR189YMA ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-VEZF1-human ENCAB728YTO DNA False 2017-11-08 ENCODE 3, 4 ENCFF046PED, ENCFF256EBS, ENCFF698KWQ 741625943 ENCODE Processing Pipeline 8e418640e24c3525b47a40db942b0a47 https://www.encodeproject.org/files/ENCFF311KGV/@@download/ENCFF311KGV.bigWig GRCh38 released missing genetic modification characterization experiment not submitted to GEO ENCFF356EMP bigWig fold change over control ENCSR189YMA ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-VEZF1-human ENCAB728YTO DNA False 2017-11-08 ENCODE 4 ENCFF046PED, ENCFF256EBS 676125914 ENCODE Processing Pipeline 4d8a4acbccd3d412161cc089b13d583d https://www.encodeproject.org/files/ENCFF356EMP/@@download/ENCFF356EMP.bigWig GRCh38 released missing genetic modification characterization experiment not submitted to GEO ENCFF550FGL bigWig fold change over control ENCSR189YMA ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-VEZF1-human ENCAB728YTO DNA False 2017-11-08 ENCODE 3, 4 ENCFF046PED, ENCFF256EBS, ENCFF698KWQ 1044594673 ENCODE Processing Pipeline bce81f5ddb70dd6ee6d3d9fb7971f065 https://www.encodeproject.org/files/ENCFF550FGL/@@download/ENCFF550FGL.bigWig GRCh38 released missing genetic modification characterization experiment not submitted to GEO ENCFF268SZL bed narrowPeak peaks ENCSR189YMA ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-VEZF1-human ENCAB728YTO DNA False 2017-11-08 ENCODE 3 ENCFF256EBS, ENCFF698KWQ 6813367 ENCODE Processing Pipeline 33705dd51cec05ad3d20f1935799f11a https://www.encodeproject.org/files/ENCFF268SZL/@@download/ENCFF268SZL.bed.gz GRCh38 released missing genetic modification characterization experiment not submitted to GEO ENCFF208ETE bed narrowPeak peaks ENCSR189YMA ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-VEZF1-human ENCAB728YTO DNA False 2017-11-08 ENCODE 4 ENCFF046PED, ENCFF256EBS 6703217 ENCODE Processing Pipeline 36563f48ebdea2669fe3e8a69738a63d https://www.encodeproject.org/files/ENCFF208ETE/@@download/ENCFF208ETE.bed.gz GRCh38 released missing genetic modification characterization experiment not submitted to GEO ENCFF357PIL bed narrowPeak peaks ENCSR189YMA ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-VEZF1-human ENCAB728YTO DNA False 2017-11-08 ENCODE 3, 4 ENCFF046PED, ENCFF256EBS, ENCFF698KWQ 7099334 ENCODE Processing Pipeline b6313021f621ed4f1d3a0f73614b8c3e https://www.encodeproject.org/files/ENCFF357PIL/@@download/ENCFF357PIL.bed.gz GRCh38 released missing genetic modification characterization experiment not submitted to GEO ENCFF988AXA bigBed narrowPeak peaks ENCSR189YMA ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-VEZF1-human ENCAB728YTO DNA False 2017-11-08 ENCODE 3 ENCFF268SZL 12850947 ENCODE Processing Pipeline 6c21049c286df0463d4a3b6e66a966fb https://www.encodeproject.org/files/ENCFF988AXA/@@download/ENCFF988AXA.bigBed GRCh38 released missing genetic modification characterization experiment not submitted to GEO ENCFF870VXK bigBed narrowPeak peaks ENCSR189YMA ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-VEZF1-human ENCAB728YTO DNA False 2017-11-08 ENCODE 4 ENCFF208ETE 12944697 ENCODE Processing Pipeline efa828e4feb56538aba285b0a2a6dcf4 https://www.encodeproject.org/files/ENCFF870VXK/@@download/ENCFF870VXK.bigBed GRCh38 released missing genetic modification characterization experiment not submitted to GEO ENCFF524ZJR bigBed narrowPeak peaks ENCSR189YMA ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-VEZF1-human ENCAB728YTO DNA False 2017-11-08 ENCODE 3, 4 ENCFF357PIL 12865262 ENCODE Processing Pipeline 66f92b5608a9d8a50eb3988c1dcccb42 https://www.encodeproject.org/files/ENCFF524ZJR/@@download/ENCFF524ZJR.bigBed GRCh38 released missing genetic modification characterization experiment not submitted to GEO ENCFF682QKR bed narrowPeak conservative idr thresholded peaks ENCSR189YMA ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-VEZF1-human ENCAB728YTO DNA False 2017-11-08 ENCODE 3, 4 ENCFF208ETE, ENCFF268SZL, ENCFF357PIL, ENCFF419RSJ 759785 ENCODE Processing Pipeline 0b307a05384b1ce3a9602d87a8399cd2 https://www.encodeproject.org/files/ENCFF682QKR/@@download/ENCFF682QKR.bed.gz GRCh38 released missing genetic modification characterization experiment not submitted to GEO ENCFF267IPW bigBed narrowPeak conservative idr thresholded peaks ENCSR189YMA ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-VEZF1-human ENCAB728YTO DNA False 2017-11-08 ENCODE 3, 4 ENCFF682QKR 1596851 ENCODE Processing Pipeline 4eb1b55cddfe97141daa07557c94fc6a https://www.encodeproject.org/files/ENCFF267IPW/@@download/ENCFF267IPW.bigBed GRCh38 released missing genetic modification characterization experiment not submitted to GEO ENCFF913CII bed narrowPeak optimal idr thresholded peaks ENCSR189YMA ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-VEZF1-human ENCAB728YTO DNA False 2017-11-08 ENCODE 3, 4 ENCFF208ETE, ENCFF268SZL, ENCFF357PIL, ENCFF419RSJ 810851 ENCODE Processing Pipeline 6e0a042bdeb782ce4a73d532955c7b36 https://www.encodeproject.org/files/ENCFF913CII/@@download/ENCFF913CII.bed.gz GRCh38 released missing genetic modification characterization experiment not submitted to GEO ENCFF881NLG bigBed narrowPeak optimal idr thresholded peaks ENCSR189YMA ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-VEZF1-human ENCAB728YTO DNA False 2017-11-08 ENCODE 3, 4 ENCFF913CII 1696282 ENCODE Processing Pipeline 665247850343beaeb0921abcc821332a https://www.encodeproject.org/files/ENCFF881NLG/@@download/ENCFF881NLG.bigBed GRCh38 released missing genetic modification characterization experiment not submitted to GEO ENCFF667HER bam unfiltered alignments ENCSR004GKA ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZEB2-human ENCAB311QPT DNA False 2016-06-14 ENCODE 1 100 ENCFF239XFD, ENCFF807MUK, ENCFF843QOR 4032855862 ENCODE Processing Pipeline 4e24d7f436e0d405ca41f7be04608935 https://www.encodeproject.org/files/ENCFF667HER/@@download/ENCFF667HER.bam hg19 released low read depth, mild to moderate bottlenecking ENCFF251WCF bam unfiltered alignments ENCSR004GKA ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZEB2-human ENCAB311QPT DNA False 2016-06-14 ENCODE 2 100 ENCFF030EJQ, ENCFF807MUK, ENCFF845NVE 5657757925 ENCODE Processing Pipeline 76ed07633177b8bbf8a6006c4b365abd https://www.encodeproject.org/files/ENCFF251WCF/@@download/ENCFF251WCF.bam hg19 released low read depth, mild to moderate bottlenecking ENCFF843QOR fastq reads ENCSR004GKA ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZEB2-human ENCAB311QPT DNA False 2016-06-14 ENCODE 1 1 100 paired-ended 2 ENCFF239XFD 1896684751 Michael Snyder, Stanford b1b269e0f7563ab4870462437570cb1d SRA:SRR5111047 https://www.encodeproject.org/files/ENCFF843QOR/@@download/ENCFF843QOR.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFH/ released low read depth, mild to moderate bottlenecking ENCFF030EJQ fastq reads ENCSR004GKA ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZEB2-human ENCAB311QPT DNA False 2016-06-14 ENCODE 2 1 100 paired-ended 1 ENCFF845NVE 2648391803 Michael Snyder, Stanford 9acc311f36a877381102552d74177aa4 SRA:SRR5111048 https://www.encodeproject.org/files/ENCFF030EJQ/@@download/ENCFF030EJQ.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFD/ released low read depth, mild to moderate bottlenecking ENCFF845NVE fastq reads ENCSR004GKA ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZEB2-human ENCAB311QPT DNA False 2016-06-14 ENCODE 2 1 100 paired-ended 2 ENCFF030EJQ 2650664541 Michael Snyder, Stanford 01eb20a3c567598ab30d9f2a0f0f145f SRA:SRR5111048 https://www.encodeproject.org/files/ENCFF845NVE/@@download/ENCFF845NVE.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFA/ released low read depth, mild to moderate bottlenecking ENCFF239XFD fastq reads ENCSR004GKA ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZEB2-human ENCAB311QPT DNA False 2016-06-14 ENCODE 1 1 100 paired-ended 1 ENCFF843QOR 1851568178 Michael Snyder, Stanford ce3885e752f19bf4ea5bc88f29d097f4 SRA:SRR5111047 https://www.encodeproject.org/files/ENCFF239XFD/@@download/ENCFF239XFD.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFF/ released low read depth, mild to moderate bottlenecking ENCFF167RGS bam alignments ENCSR004GKA ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZEB2-human ENCAB311QPT DNA False 2016-06-14 ENCODE 1 100 ENCFF239XFD, ENCFF807MUK, ENCFF843QOR 3246261874 ENCODE Processing Pipeline 05a7a5b5030d96d9e28ecca6d4ae4b35 https://www.encodeproject.org/files/ENCFF167RGS/@@download/ENCFF167RGS.bam hg19 released low read depth, mild to moderate bottlenecking ENCFF689KTQ bam alignments ENCSR004GKA ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZEB2-human ENCAB311QPT DNA False 2016-06-14 ENCODE 2 100 ENCFF030EJQ, ENCFF807MUK, ENCFF845NVE 4512438449 ENCODE Processing Pipeline 8d18dcbacf858d287c3bfc65879e530f https://www.encodeproject.org/files/ENCFF689KTQ/@@download/ENCFF689KTQ.bam hg19 released low read depth, mild to moderate bottlenecking ENCFF131KPZ bigWig signal p-value ENCSR004GKA ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZEB2-human ENCAB311QPT DNA False 2016-06-14 ENCODE 1 ENCFF167RGS, ENCFF581ZJL 1001626051 ENCODE Processing Pipeline 369d9b53537db17071daebad381aed00 https://www.encodeproject.org/files/ENCFF131KPZ/@@download/ENCFF131KPZ.bigWig hg19 released low read depth, mild to moderate bottlenecking ENCFF781CIK bigWig signal p-value ENCSR004GKA ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZEB2-human ENCAB311QPT DNA False 2016-06-14 ENCODE 2 ENCFF051LWI, ENCFF689KTQ 920223118 ENCODE Processing Pipeline ff333ce2aacdf8d2de9b2f1426a79dcd https://www.encodeproject.org/files/ENCFF781CIK/@@download/ENCFF781CIK.bigWig hg19 released low read depth, mild to moderate bottlenecking ENCFF340BLF bigWig signal p-value ENCSR004GKA ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZEB2-human ENCAB311QPT DNA False 2016-06-14 ENCODE 1, 2 ENCFF051LWI, ENCFF167RGS, ENCFF581ZJL, ENCFF689KTQ 1877814285 ENCODE Processing Pipeline 2413c5c8e08a3794735cdfb4953fe888 https://www.encodeproject.org/files/ENCFF340BLF/@@download/ENCFF340BLF.bigWig hg19 released low read depth, mild to moderate bottlenecking ENCFF190KTA bigWig fold change over control ENCSR004GKA ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZEB2-human ENCAB311QPT DNA False 2016-06-14 ENCODE 1 ENCFF167RGS, ENCFF581ZJL 1058905259 ENCODE Processing Pipeline 0d4b258debeaca46f4593d4be38532aa https://www.encodeproject.org/files/ENCFF190KTA/@@download/ENCFF190KTA.bigWig hg19 released low read depth, mild to moderate bottlenecking ENCFF524YMI bigWig fold change over control ENCSR004GKA ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZEB2-human ENCAB311QPT DNA False 2016-06-14 ENCODE 2 ENCFF051LWI, ENCFF689KTQ 1105578896 ENCODE Processing Pipeline 389162d3e4f287e9942b305f65839f7f https://www.encodeproject.org/files/ENCFF524YMI/@@download/ENCFF524YMI.bigWig hg19 released low read depth, mild to moderate bottlenecking ENCFF080AFW bigWig fold change over control ENCSR004GKA ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZEB2-human ENCAB311QPT DNA False 2016-06-14 ENCODE 1, 2 ENCFF051LWI, ENCFF167RGS, ENCFF581ZJL, ENCFF689KTQ 1971535279 ENCODE Processing Pipeline de6f59e1a156a1b0d80aed38c37cf552 https://www.encodeproject.org/files/ENCFF080AFW/@@download/ENCFF080AFW.bigWig hg19 released low read depth, mild to moderate bottlenecking ENCFF101SDV bed narrowPeak peaks ENCSR004GKA ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZEB2-human ENCAB311QPT DNA False 2016-06-14 ENCODE 1, 2 ENCFF051LWI, ENCFF167RGS, ENCFF581ZJL, ENCFF689KTQ 7178040 ENCODE Processing Pipeline 0de4c28ddb2b43817cc84236be2e66a4 https://www.encodeproject.org/files/ENCFF101SDV/@@download/ENCFF101SDV.bed.gz hg19 released low read depth, mild to moderate bottlenecking ENCFF524RDY bed narrowPeak peaks ENCSR004GKA ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZEB2-human ENCAB311QPT DNA False 2016-06-14 ENCODE 1 ENCFF167RGS, ENCFF581ZJL 6933055 ENCODE Processing Pipeline 1c3305645ee0244fa7084996518070cd https://www.encodeproject.org/files/ENCFF524RDY/@@download/ENCFF524RDY.bed.gz hg19 released low read depth, mild to moderate bottlenecking ENCFF683CLN bigBed narrowPeak peaks ENCSR004GKA ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZEB2-human ENCAB311QPT DNA False 2016-06-14 ENCODE 1 ENCFF524RDY 13121840 ENCODE Processing Pipeline 923c0381027c18a3bd41b9dc2a8f56b4 https://www.encodeproject.org/files/ENCFF683CLN/@@download/ENCFF683CLN.bigBed hg19 released low read depth, mild to moderate bottlenecking ENCFF333ULN bed narrowPeak peaks ENCSR004GKA ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZEB2-human ENCAB311QPT DNA False 2016-06-14 ENCODE 2 ENCFF051LWI, ENCFF689KTQ 7069411 ENCODE Processing Pipeline 038820ec11df6d6781de8da33e8ea384 https://www.encodeproject.org/files/ENCFF333ULN/@@download/ENCFF333ULN.bed.gz hg19 released low read depth, mild to moderate bottlenecking ENCFF070CAG bigBed narrowPeak peaks ENCSR004GKA ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZEB2-human ENCAB311QPT DNA False 2016-06-14 ENCODE 2 ENCFF333ULN 12994210 ENCODE Processing Pipeline 4a994320b1ab1af66a7c51dc4d55fcad https://www.encodeproject.org/files/ENCFF070CAG/@@download/ENCFF070CAG.bigBed hg19 released low read depth, mild to moderate bottlenecking ENCFF323FPW bigBed narrowPeak peaks ENCSR004GKA ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZEB2-human ENCAB311QPT DNA False 2016-06-14 ENCODE 1, 2 ENCFF101SDV 12794709 ENCODE Processing Pipeline 425278c06aa2390dbf117310b401b4b8 https://www.encodeproject.org/files/ENCFF323FPW/@@download/ENCFF323FPW.bigBed hg19 released low read depth, mild to moderate bottlenecking ENCFF761RWD bam unfiltered alignments ENCSR004GKA ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZEB2-human ENCAB311QPT DNA False 2016-06-14 ENCODE 1 100 ENCFF239XFD, ENCFF643CGH, ENCFF843QOR 4035567770 ENCODE Processing Pipeline 71160abffb8ecc0c219f9058f30d65de https://www.encodeproject.org/files/ENCFF761RWD/@@download/ENCFF761RWD.bam GRCh38 released low read depth, mild to moderate bottlenecking ENCFF003SPM bam unfiltered alignments ENCSR004GKA ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZEB2-human ENCAB311QPT DNA False 2016-06-14 ENCODE 2 100 ENCFF030EJQ, ENCFF643CGH, ENCFF845NVE 5661082048 ENCODE Processing Pipeline dc9aacf0327b9a2ab2c11c4a33a1d0fb https://www.encodeproject.org/files/ENCFF003SPM/@@download/ENCFF003SPM.bam GRCh38 released low read depth, mild to moderate bottlenecking ENCFF754GYS bam alignments ENCSR004GKA ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZEB2-human ENCAB311QPT DNA False 2016-06-14 ENCODE 2 100 ENCFF030EJQ, ENCFF643CGH, ENCFF845NVE 4515247950 ENCODE Processing Pipeline c0d371dc787b865a438d224a6037691d https://www.encodeproject.org/files/ENCFF754GYS/@@download/ENCFF754GYS.bam GRCh38 released low read depth, mild to moderate bottlenecking ENCFF035CJB bam alignments ENCSR004GKA ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZEB2-human ENCAB311QPT DNA False 2016-06-14 ENCODE 1 100 ENCFF239XFD, ENCFF643CGH, ENCFF843QOR 3247919616 ENCODE Processing Pipeline aa3d36df032a4a1c19332d879cdc7573 https://www.encodeproject.org/files/ENCFF035CJB/@@download/ENCFF035CJB.bam GRCh38 released low read depth, mild to moderate bottlenecking ENCFF910KKD bigWig signal p-value ENCSR004GKA ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZEB2-human ENCAB311QPT DNA False 2016-06-14 ENCODE 1 ENCFF035CJB, ENCFF910IKB 950220676 ENCODE Processing Pipeline 062dccde6a175cdf17504e9bb7fc7e27 https://www.encodeproject.org/files/ENCFF910KKD/@@download/ENCFF910KKD.bigWig GRCh38 released low read depth, mild to moderate bottlenecking ENCFF650TBT bigWig signal p-value ENCSR004GKA ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZEB2-human ENCAB311QPT DNA False 2016-06-14 ENCODE 2 ENCFF227IZS, ENCFF754GYS 1092152129 ENCODE Processing Pipeline 70f533fc2c04f39ab15aaeb7bb119c42 https://www.encodeproject.org/files/ENCFF650TBT/@@download/ENCFF650TBT.bigWig GRCh38 released low read depth, mild to moderate bottlenecking ENCFF044EPC bigWig signal p-value ENCSR004GKA ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZEB2-human ENCAB311QPT DNA False 2016-06-14 ENCODE 1, 2 ENCFF035CJB, ENCFF227IZS, ENCFF754GYS, ENCFF910IKB 1681007049 ENCODE Processing Pipeline c0c048503de9310284eb298e9683c9b5 https://www.encodeproject.org/files/ENCFF044EPC/@@download/ENCFF044EPC.bigWig GRCh38 released low read depth, mild to moderate bottlenecking ENCFF277NXA bigWig fold change over control ENCSR004GKA ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZEB2-human ENCAB311QPT DNA False 2016-06-14 ENCODE 1 ENCFF035CJB, ENCFF910IKB 1028243642 ENCODE Processing Pipeline d5a8726737d44740502ce31d1be12479 https://www.encodeproject.org/files/ENCFF277NXA/@@download/ENCFF277NXA.bigWig GRCh38 released low read depth, mild to moderate bottlenecking ENCFF882JPS bigWig fold change over control ENCSR004GKA ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZEB2-human ENCAB311QPT DNA False 2016-06-14 ENCODE 2 ENCFF227IZS, ENCFF754GYS 1104886100 ENCODE Processing Pipeline 3012fcc81605868a8c84917dbed266ee https://www.encodeproject.org/files/ENCFF882JPS/@@download/ENCFF882JPS.bigWig GRCh38 released low read depth, mild to moderate bottlenecking ENCFF357KCF bigWig fold change over control ENCSR004GKA ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZEB2-human ENCAB311QPT DNA False 2016-06-14 ENCODE 1, 2 ENCFF035CJB, ENCFF227IZS, ENCFF754GYS, ENCFF910IKB 2004600333 ENCODE Processing Pipeline 1969faec5189864fad7f0b32f64f51ff https://www.encodeproject.org/files/ENCFF357KCF/@@download/ENCFF357KCF.bigWig GRCh38 released low read depth, mild to moderate bottlenecking ENCFF909RRT bed narrowPeak peaks ENCSR004GKA ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZEB2-human ENCAB311QPT DNA False 2016-06-14 ENCODE 1 ENCFF035CJB, ENCFF910IKB 6826961 ENCODE Processing Pipeline 7b33c6ed24b61d7cb79c779745ba4ed9 https://www.encodeproject.org/files/ENCFF909RRT/@@download/ENCFF909RRT.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking ENCFF183XMA bed narrowPeak peaks ENCSR004GKA ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZEB2-human ENCAB311QPT DNA False 2016-06-14 ENCODE 2 ENCFF227IZS, ENCFF754GYS 6960087 ENCODE Processing Pipeline e01d68b420ab4baec07c47906baebf4c https://www.encodeproject.org/files/ENCFF183XMA/@@download/ENCFF183XMA.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking ENCFF431YFN bed narrowPeak peaks ENCSR004GKA ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZEB2-human ENCAB311QPT DNA False 2016-06-14 ENCODE 1, 2 ENCFF035CJB, ENCFF227IZS, ENCFF754GYS, ENCFF910IKB 7199473 ENCODE Processing Pipeline 464d6f1b6c3388a9855f2c5a85bce639 https://www.encodeproject.org/files/ENCFF431YFN/@@download/ENCFF431YFN.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking ENCFF519XNN bigBed narrowPeak peaks ENCSR004GKA ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZEB2-human ENCAB311QPT DNA False 2016-06-14 ENCODE 1 ENCFF909RRT 13093480 ENCODE Processing Pipeline f0cdda06536f391829ebf11b8951cc21 https://www.encodeproject.org/files/ENCFF519XNN/@@download/ENCFF519XNN.bigBed GRCh38 released low read depth, mild to moderate bottlenecking ENCFF468WPQ bigBed narrowPeak peaks ENCSR004GKA ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZEB2-human ENCAB311QPT DNA False 2016-06-14 ENCODE 2 ENCFF183XMA 12952429 ENCODE Processing Pipeline 94c35882af8c05cd292b1feaf1f8534c https://www.encodeproject.org/files/ENCFF468WPQ/@@download/ENCFF468WPQ.bigBed GRCh38 released low read depth, mild to moderate bottlenecking ENCFF740KFU bigBed narrowPeak peaks ENCSR004GKA ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZEB2-human ENCAB311QPT DNA False 2016-06-14 ENCODE 1, 2 ENCFF431YFN 12830375 ENCODE Processing Pipeline 7f2e806da345124b935cac0436cc15eb https://www.encodeproject.org/files/ENCFF740KFU/@@download/ENCFF740KFU.bigBed GRCh38 released low read depth, mild to moderate bottlenecking ENCFF892BNB bed narrowPeak conservative idr thresholded peaks ENCSR004GKA ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZEB2-human ENCAB311QPT DNA False 2016-06-14 ENCODE 1, 2 ENCFF183XMA, ENCFF419RSJ, ENCFF431YFN, ENCFF909RRT 393806 ENCODE Processing Pipeline 1b84e4fb556284f763450540a0fd441d https://www.encodeproject.org/files/ENCFF892BNB/@@download/ENCFF892BNB.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking ENCFF408GQR bigBed narrowPeak conservative idr thresholded peaks ENCSR004GKA ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZEB2-human ENCAB311QPT DNA False 2016-06-14 ENCODE 1, 2 ENCFF892BNB 822214 ENCODE Processing Pipeline 335dee4b2af66a7d20ff0ff30c0862ca https://www.encodeproject.org/files/ENCFF408GQR/@@download/ENCFF408GQR.bigBed GRCh38 released low read depth, mild to moderate bottlenecking ENCFF808NWU bed narrowPeak optimal idr thresholded peaks ENCSR004GKA ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZEB2-human ENCAB311QPT DNA False 2016-06-14 ENCODE 1, 2 ENCFF183XMA, ENCFF419RSJ, ENCFF431YFN, ENCFF909RRT 494804 ENCODE Processing Pipeline 091147fb85557ce881ed563fdad1fcbd https://www.encodeproject.org/files/ENCFF808NWU/@@download/ENCFF808NWU.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking ENCFF616HUW bigBed narrowPeak optimal idr thresholded peaks ENCSR004GKA ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZEB2-human ENCAB311QPT DNA False 2016-06-14 ENCODE 1, 2 ENCFF808NWU 977635 ENCODE Processing Pipeline cd80e70ba072f7dce0ee45aeb08dbc39 https://www.encodeproject.org/files/ENCFF616HUW/@@download/ENCFF616HUW.bigBed GRCh38 released low read depth, mild to moderate bottlenecking ENCFF634SXL bigBed narrowPeak optimal idr thresholded peaks ENCSR004GKA ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZEB2-human ENCAB311QPT DNA False 2016-06-14 ENCODE 1, 2 ENCFF076IFG 878811 ENCODE Processing Pipeline 2518b8dae328477df3bf09b5622ab066 https://www.encodeproject.org/files/ENCFF634SXL/@@download/ENCFF634SXL.bigBed hg19 released low read depth, mild to moderate bottlenecking ENCFF132ZXL bed narrowPeak conservative idr thresholded peaks ENCSR004GKA ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZEB2-human ENCAB311QPT DNA False 2016-06-14 ENCODE 1, 2 ENCFF001TDO, ENCFF101SDV, ENCFF333ULN, ENCFF524RDY 339125 ENCODE Processing Pipeline 44eca35ec4dc43390bc8312b6bec294c https://www.encodeproject.org/files/ENCFF132ZXL/@@download/ENCFF132ZXL.bed.gz hg19 released low read depth, mild to moderate bottlenecking ENCFF953GAI bigBed narrowPeak conservative idr thresholded peaks ENCSR004GKA ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZEB2-human ENCAB311QPT DNA False 2016-06-14 ENCODE 1, 2 ENCFF132ZXL 744618 ENCODE Processing Pipeline 5919e0d870834b419604661685c69a37 https://www.encodeproject.org/files/ENCFF953GAI/@@download/ENCFF953GAI.bigBed hg19 released low read depth, mild to moderate bottlenecking ENCFF076IFG bed narrowPeak optimal idr thresholded peaks ENCSR004GKA ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZEB2-human ENCAB311QPT DNA False 2016-06-14 ENCODE 1, 2 ENCFF001TDO, ENCFF101SDV, ENCFF333ULN, ENCFF524RDY 429072 ENCODE Processing Pipeline 2685a6bf489be07bdc3b2f2d29d997cd https://www.encodeproject.org/files/ENCFF076IFG/@@download/ENCFF076IFG.bed.gz hg19 released low read depth, mild to moderate bottlenecking ENCFF871VOL fastq reads ENCSR690GUG ChIP-seq EFO:0002067 K562 cell line Homo sapiens U2AF1-human ENCAB298WVV DNA SDS formaldehyde False 2017-02-27 ENCODE 1 1 40 single-ended 777939260 Xiang-Dong Fu, UCSD 12b635724201078f844bfa6603bd8035 SRA:SRR6213680 https://www.encodeproject.org/files/ENCFF871VOL/@@download/ENCFF871VOL.fastq.gz Illumina HiSeq 2500 /files/ENCFF025UQF/ released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF582GZQ fastq reads ENCSR690GUG ChIP-seq EFO:0002067 K562 cell line Homo sapiens U2AF1-human ENCAB298WVV DNA SDS formaldehyde False 2017-02-27 ENCODE 2 1 40 single-ended 897154744 Xiang-Dong Fu, UCSD ed7b4cbb260bb9da2855375a3a2d783d SRA:SRR6213679 https://www.encodeproject.org/files/ENCFF582GZQ/@@download/ENCFF582GZQ.fastq.gz Illumina HiSeq 2500 /files/ENCFF201ZVH/ released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF004KLH bam unfiltered alignments ENCSR690GUG ChIP-seq EFO:0002067 K562 cell line Homo sapiens U2AF1-human ENCAB298WVV DNA SDS formaldehyde False 2017-02-27 ENCODE 1 40 ENCFF643CGH, ENCFF871VOL 999829234 ENCODE Processing Pipeline 58fc1fb716aae926b7e454e17ba1f8cd https://www.encodeproject.org/files/ENCFF004KLH/@@download/ENCFF004KLH.bam GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF222PVF bam alignments ENCSR690GUG ChIP-seq EFO:0002067 K562 cell line Homo sapiens U2AF1-human ENCAB298WVV DNA SDS formaldehyde False 2017-02-27 ENCODE 1 40 ENCFF807MUK, ENCFF871VOL 555315033 ENCODE Processing Pipeline 8189288619623db23dbfd5dc72a17086 https://www.encodeproject.org/files/ENCFF222PVF/@@download/ENCFF222PVF.bam hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF580PSR bam unfiltered alignments ENCSR690GUG ChIP-seq EFO:0002067 K562 cell line Homo sapiens U2AF1-human ENCAB298WVV DNA SDS formaldehyde False 2017-02-27 ENCODE 1 40 ENCFF807MUK, ENCFF871VOL 996007491 ENCODE Processing Pipeline 8663d9033c5731e91943f20e89f27d06 https://www.encodeproject.org/files/ENCFF580PSR/@@download/ENCFF580PSR.bam hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF542IUY bam unfiltered alignments ENCSR690GUG ChIP-seq EFO:0002067 K562 cell line Homo sapiens U2AF1-human ENCAB298WVV DNA SDS formaldehyde False 2017-02-27 ENCODE 2 40 ENCFF582GZQ, ENCFF643CGH 1140864522 ENCODE Processing Pipeline efc58a0d0a9ab23caf392c42b3353eeb https://www.encodeproject.org/files/ENCFF542IUY/@@download/ENCFF542IUY.bam GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF256TIZ bam unfiltered alignments ENCSR690GUG ChIP-seq EFO:0002067 K562 cell line Homo sapiens U2AF1-human ENCAB298WVV DNA SDS formaldehyde False 2017-02-27 ENCODE 2 40 ENCFF582GZQ, ENCFF807MUK 1135921065 ENCODE Processing Pipeline 69f80302fd5b092f578a8a4880d9df7c https://www.encodeproject.org/files/ENCFF256TIZ/@@download/ENCFF256TIZ.bam hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF010TVY bam alignments ENCSR690GUG ChIP-seq EFO:0002067 K562 cell line Homo sapiens U2AF1-human ENCAB298WVV DNA SDS formaldehyde False 2017-02-27 ENCODE 1 40 ENCFF643CGH, ENCFF871VOL 554647663 ENCODE Processing Pipeline c330cc35e45e1388e97d3793bd105c77 https://www.encodeproject.org/files/ENCFF010TVY/@@download/ENCFF010TVY.bam GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF057SMG bam alignments ENCSR690GUG ChIP-seq EFO:0002067 K562 cell line Homo sapiens U2AF1-human ENCAB298WVV DNA SDS formaldehyde False 2017-02-27 ENCODE 2 40 ENCFF582GZQ, ENCFF643CGH 604858692 ENCODE Processing Pipeline d5d60cfdcfea11d5c0ea96d3bcc57f5d https://www.encodeproject.org/files/ENCFF057SMG/@@download/ENCFF057SMG.bam GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF203ABU bam alignments ENCSR690GUG ChIP-seq EFO:0002067 K562 cell line Homo sapiens U2AF1-human ENCAB298WVV DNA SDS formaldehyde False 2017-02-27 ENCODE 2 40 ENCFF582GZQ, ENCFF807MUK 605547827 ENCODE Processing Pipeline 9ec344c64f9d98346c8bbc5f96ce010e https://www.encodeproject.org/files/ENCFF203ABU/@@download/ENCFF203ABU.bam hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF084VEW bigWig fold change over control ENCSR690GUG ChIP-seq EFO:0002067 K562 cell line Homo sapiens U2AF1-human ENCAB298WVV DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF203ABU, ENCFF222PVF, ENCFF477SGV, ENCFF705ZEH 780439308 ENCODE Processing Pipeline 274e20d1dd26513c885ec0395d4fdd06 https://www.encodeproject.org/files/ENCFF084VEW/@@download/ENCFF084VEW.bigWig hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF658SVX bed narrowPeak peaks ENCSR690GUG ChIP-seq EFO:0002067 K562 cell line Homo sapiens U2AF1-human ENCAB298WVV DNA SDS formaldehyde False 2017-02-27 ENCODE 2 ENCFF203ABU, ENCFF705ZEH 5319820 ENCODE Processing Pipeline 27097323d9c4e72c0cfc64ffabfee66d https://www.encodeproject.org/files/ENCFF658SVX/@@download/ENCFF658SVX.bed.gz hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF129HHS bigBed narrowPeak peaks ENCSR690GUG ChIP-seq EFO:0002067 K562 cell line Homo sapiens U2AF1-human ENCAB298WVV DNA SDS formaldehyde False 2017-02-27 ENCODE 2 ENCFF658SVX 13223440 ENCODE Processing Pipeline 66be467299df12b15e825d4ae8a7a02b https://www.encodeproject.org/files/ENCFF129HHS/@@download/ENCFF129HHS.bigBed hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF007RRZ bigBed narrowPeak conservative idr thresholded peaks ENCSR690GUG ChIP-seq EFO:0002067 K562 cell line Homo sapiens U2AF1-human ENCAB298WVV DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF342ZVG 189246 ENCODE Processing Pipeline f8251893593e9797bee8976482631d86 https://www.encodeproject.org/files/ENCFF007RRZ/@@download/ENCFF007RRZ.bigBed hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF750FVG bigWig fold change over control ENCSR690GUG ChIP-seq EFO:0002067 K562 cell line Homo sapiens U2AF1-human ENCAB298WVV DNA SDS formaldehyde False 2017-02-27 ENCODE 1 ENCFF222PVF, ENCFF477SGV 322573760 ENCODE Processing Pipeline 8b43d7ac93f4da31f8ed3ddf6fa6dc7c https://www.encodeproject.org/files/ENCFF750FVG/@@download/ENCFF750FVG.bigWig hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF681AZR bigWig fold change over control ENCSR690GUG ChIP-seq EFO:0002067 K562 cell line Homo sapiens U2AF1-human ENCAB298WVV DNA SDS formaldehyde False 2017-02-27 ENCODE 2 ENCFF203ABU, ENCFF705ZEH 355931656 ENCODE Processing Pipeline 5493bad799d3d135d52a7a396c594e9c https://www.encodeproject.org/files/ENCFF681AZR/@@download/ENCFF681AZR.bigWig hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF948OFI bed narrowPeak peaks ENCSR690GUG ChIP-seq EFO:0002067 K562 cell line Homo sapiens U2AF1-human ENCAB298WVV DNA SDS formaldehyde False 2017-02-27 ENCODE 1 ENCFF222PVF, ENCFF477SGV 5295909 ENCODE Processing Pipeline edab1ed4566b4314cc23b829e56f8d33 https://www.encodeproject.org/files/ENCFF948OFI/@@download/ENCFF948OFI.bed.gz hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF473NOQ bed narrowPeak peaks ENCSR690GUG ChIP-seq EFO:0002067 K562 cell line Homo sapiens U2AF1-human ENCAB298WVV DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF203ABU, ENCFF222PVF, ENCFF477SGV, ENCFF705ZEH 6716591 ENCODE Processing Pipeline 48a613334fcd7390397d1898e33b8ca9 https://www.encodeproject.org/files/ENCFF473NOQ/@@download/ENCFF473NOQ.bed.gz hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF960XVZ bigBed narrowPeak peaks ENCSR690GUG ChIP-seq EFO:0002067 K562 cell line Homo sapiens U2AF1-human ENCAB298WVV DNA SDS formaldehyde False 2017-02-27 ENCODE 1 ENCFF948OFI 13190788 ENCODE Processing Pipeline 2d08fefb8e016b0b9154cc563a7b158d https://www.encodeproject.org/files/ENCFF960XVZ/@@download/ENCFF960XVZ.bigBed hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF417XQM bigBed narrowPeak peaks ENCSR690GUG ChIP-seq EFO:0002067 K562 cell line Homo sapiens U2AF1-human ENCAB298WVV DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF473NOQ 13413559 ENCODE Processing Pipeline a56eb53f5c425a8a3abc887de1e0f60e https://www.encodeproject.org/files/ENCFF417XQM/@@download/ENCFF417XQM.bigBed hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF730URE bed narrowPeak optimal idr thresholded peaks ENCSR690GUG ChIP-seq EFO:0002067 K562 cell line Homo sapiens U2AF1-human ENCAB298WVV DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF001TDO, ENCFF473NOQ, ENCFF658SVX, ENCFF948OFI 82082 ENCODE Processing Pipeline 6da5084fceeea43dc8aba95ea3187c52 https://www.encodeproject.org/files/ENCFF730URE/@@download/ENCFF730URE.bed.gz hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF763QWR bigBed narrowPeak optimal idr thresholded peaks ENCSR690GUG ChIP-seq EFO:0002067 K562 cell line Homo sapiens U2AF1-human ENCAB298WVV DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF730URE 205520 ENCODE Processing Pipeline 4b552c35bd078e671e560619329bdf04 https://www.encodeproject.org/files/ENCFF763QWR/@@download/ENCFF763QWR.bigBed hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF342ZVG bed narrowPeak conservative idr thresholded peaks ENCSR690GUG ChIP-seq EFO:0002067 K562 cell line Homo sapiens U2AF1-human ENCAB298WVV DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF001TDO, ENCFF473NOQ, ENCFF658SVX, ENCFF948OFI 72695 ENCODE Processing Pipeline cbb92343d0de0b3cc29604b57c81f083 https://www.encodeproject.org/files/ENCFF342ZVG/@@download/ENCFF342ZVG.bed.gz hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF074NKR bigWig signal p-value ENCSR690GUG ChIP-seq EFO:0002067 K562 cell line Homo sapiens U2AF1-human ENCAB298WVV DNA SDS formaldehyde False 2017-02-27 ENCODE 1 ENCFF222PVF, ENCFF477SGV 414653364 ENCODE Processing Pipeline 826829ec5b30fe503cf7895a088a0afc https://www.encodeproject.org/files/ENCFF074NKR/@@download/ENCFF074NKR.bigWig hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF843IKA bigWig signal p-value ENCSR690GUG ChIP-seq EFO:0002067 K562 cell line Homo sapiens U2AF1-human ENCAB298WVV DNA SDS formaldehyde False 2017-02-27 ENCODE 2 ENCFF203ABU, ENCFF705ZEH 423187372 ENCODE Processing Pipeline ebdd51f2cc925f85f8a3e306b4529a89 https://www.encodeproject.org/files/ENCFF843IKA/@@download/ENCFF843IKA.bigWig hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF773JAL bigWig signal p-value ENCSR690GUG ChIP-seq EFO:0002067 K562 cell line Homo sapiens U2AF1-human ENCAB298WVV DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF203ABU, ENCFF222PVF, ENCFF477SGV, ENCFF705ZEH 750756898 ENCODE Processing Pipeline 1acd7b51083b584ead39f9d3439f3a84 https://www.encodeproject.org/files/ENCFF773JAL/@@download/ENCFF773JAL.bigWig hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF157FXZ bigWig signal p-value ENCSR690GUG ChIP-seq EFO:0002067 K562 cell line Homo sapiens U2AF1-human ENCAB298WVV DNA SDS formaldehyde False 2017-02-27 ENCODE 1 ENCFF010TVY, ENCFF308PSW 492680041 ENCODE Processing Pipeline 178320e0f0c2aba003d364205e6edec5 https://www.encodeproject.org/files/ENCFF157FXZ/@@download/ENCFF157FXZ.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF345IQA bigWig signal p-value ENCSR690GUG ChIP-seq EFO:0002067 K562 cell line Homo sapiens U2AF1-human ENCAB298WVV DNA SDS formaldehyde False 2017-02-27 ENCODE 2 ENCFF057SMG, ENCFF198JCQ 425655750 ENCODE Processing Pipeline 410f2fc0ebe8334deae20651fbbaf4cf https://www.encodeproject.org/files/ENCFF345IQA/@@download/ENCFF345IQA.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF552CCU bigWig fold change over control ENCSR690GUG ChIP-seq EFO:0002067 K562 cell line Homo sapiens U2AF1-human ENCAB298WVV DNA SDS formaldehyde False 2017-02-27 ENCODE 2 ENCFF057SMG, ENCFF198JCQ 355782389 ENCODE Processing Pipeline d2efad2157efe1d909c0c9ee4852b387 https://www.encodeproject.org/files/ENCFF552CCU/@@download/ENCFF552CCU.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF664XDO bigBed narrowPeak peaks ENCSR690GUG ChIP-seq EFO:0002067 K562 cell line Homo sapiens U2AF1-human ENCAB298WVV DNA SDS formaldehyde False 2017-02-27 ENCODE 2 ENCFF251STL 13245691 ENCODE Processing Pipeline 9c76310c49d44643eb75809b255aca65 https://www.encodeproject.org/files/ENCFF664XDO/@@download/ENCFF664XDO.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF761ITN bed narrowPeak conservative idr thresholded peaks ENCSR690GUG ChIP-seq EFO:0002067 K562 cell line Homo sapiens U2AF1-human ENCAB298WVV DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF251STL, ENCFF413JEY, ENCFF419RSJ, ENCFF763NYG 72551 ENCODE Processing Pipeline acd0a0a3faa69345e2e3a8597e3c06a5 https://www.encodeproject.org/files/ENCFF761ITN/@@download/ENCFF761ITN.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF447BFV bigBed narrowPeak peaks ENCSR690GUG ChIP-seq EFO:0002067 K562 cell line Homo sapiens U2AF1-human ENCAB298WVV DNA SDS formaldehyde False 2017-02-27 ENCODE 1 ENCFF763NYG 13170242 ENCODE Processing Pipeline e0a53d0b82d5aad5b231f94cf9497891 https://www.encodeproject.org/files/ENCFF447BFV/@@download/ENCFF447BFV.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF482DRO bed narrowPeak optimal idr thresholded peaks ENCSR690GUG ChIP-seq EFO:0002067 K562 cell line Homo sapiens U2AF1-human ENCAB298WVV DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF251STL, ENCFF413JEY, ENCFF419RSJ, ENCFF763NYG 82992 ENCODE Processing Pipeline d26d99b4850455d67a350c8833578aa1 https://www.encodeproject.org/files/ENCFF482DRO/@@download/ENCFF482DRO.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF749TGL bigWig fold change over control ENCSR690GUG ChIP-seq EFO:0002067 K562 cell line Homo sapiens U2AF1-human ENCAB298WVV DNA SDS formaldehyde False 2017-02-27 ENCODE 1 ENCFF010TVY, ENCFF308PSW 323887483 ENCODE Processing Pipeline f8050dbbd3ec9ce9e1349bf684ee0999 https://www.encodeproject.org/files/ENCFF749TGL/@@download/ENCFF749TGL.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF763NYG bed narrowPeak peaks ENCSR690GUG ChIP-seq EFO:0002067 K562 cell line Homo sapiens U2AF1-human ENCAB298WVV DNA SDS formaldehyde False 2017-02-27 ENCODE 1 ENCFF010TVY, ENCFF308PSW 5113711 ENCODE Processing Pipeline 8c12d6b7557d89bfab48c73b290b930d https://www.encodeproject.org/files/ENCFF763NYG/@@download/ENCFF763NYG.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF251STL bed narrowPeak peaks ENCSR690GUG ChIP-seq EFO:0002067 K562 cell line Homo sapiens U2AF1-human ENCAB298WVV DNA SDS formaldehyde False 2017-02-27 ENCODE 2 ENCFF057SMG, ENCFF198JCQ 5249963 ENCODE Processing Pipeline a75437180a3da7d5761960149bcf1b18 https://www.encodeproject.org/files/ENCFF251STL/@@download/ENCFF251STL.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF780OBN bigWig signal p-value ENCSR690GUG ChIP-seq EFO:0002067 K562 cell line Homo sapiens U2AF1-human ENCAB298WVV DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF010TVY, ENCFF057SMG, ENCFF198JCQ, ENCFF308PSW 872048219 ENCODE Processing Pipeline 90ba2c28575fa349e05be9afe2c0c3a5 https://www.encodeproject.org/files/ENCFF780OBN/@@download/ENCFF780OBN.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF209UZT bigWig fold change over control ENCSR690GUG ChIP-seq EFO:0002067 K562 cell line Homo sapiens U2AF1-human ENCAB298WVV DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF010TVY, ENCFF057SMG, ENCFF198JCQ, ENCFF308PSW 742648735 ENCODE Processing Pipeline 5901e952189b9180b86e24f2d822f3cf https://www.encodeproject.org/files/ENCFF209UZT/@@download/ENCFF209UZT.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF413JEY bed narrowPeak peaks ENCSR690GUG ChIP-seq EFO:0002067 K562 cell line Homo sapiens U2AF1-human ENCAB298WVV DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF010TVY, ENCFF057SMG, ENCFF198JCQ, ENCFF308PSW 6602926 ENCODE Processing Pipeline 2ea60528636839ef52131baac4b57ad2 https://www.encodeproject.org/files/ENCFF413JEY/@@download/ENCFF413JEY.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF498TJC bigBed narrowPeak peaks ENCSR690GUG ChIP-seq EFO:0002067 K562 cell line Homo sapiens U2AF1-human ENCAB298WVV DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF413JEY 13470561 ENCODE Processing Pipeline 4664bbee482f1dcbbea575701ac1cff3 https://www.encodeproject.org/files/ENCFF498TJC/@@download/ENCFF498TJC.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF335XBA bigBed narrowPeak optimal idr thresholded peaks ENCSR690GUG ChIP-seq EFO:0002067 K562 cell line Homo sapiens U2AF1-human ENCAB298WVV DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF482DRO 209381 ENCODE Processing Pipeline 6265e89437022990d77645df977a23dd https://www.encodeproject.org/files/ENCFF335XBA/@@download/ENCFF335XBA.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF069LAT bigBed narrowPeak conservative idr thresholded peaks ENCSR690GUG ChIP-seq EFO:0002067 K562 cell line Homo sapiens U2AF1-human ENCAB298WVV DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF761ITN 191782 ENCODE Processing Pipeline 8ade0d3c640b2ff7ae8aee65669e8286 https://www.encodeproject.org/files/ENCFF069LAT/@@download/ENCFF069LAT.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF160GSI fastq reads ENCSR160QYK ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATAD2A-human ENCAB255TQH DNA False 2017-09-28 ENCODE 1 1 100 paired-ended 1 ENCFF076CUB 3236455409 Michael Snyder, Stanford 35dc08f8d0f30bfa60bf7d4dab152b89 SRA:SRR6212864 https://www.encodeproject.org/files/ENCFF160GSI/@@download/ENCFF160GSI.fastq.gz Illumina HiSeq 2000 /files/ENCFF410PHD/ released missing control alignments ENCFF076CUB fastq reads ENCSR160QYK ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATAD2A-human ENCAB255TQH DNA False 2017-09-28 ENCODE 1 1 100 paired-ended 2 ENCFF160GSI 3260865609 Michael Snyder, Stanford 19b2407d1f1003aed1c4f4d7cbe91f55 SRA:SRR6212864 https://www.encodeproject.org/files/ENCFF076CUB/@@download/ENCFF076CUB.fastq.gz Illumina HiSeq 2000 /files/ENCFF368UOC/ released missing control alignments ENCFF762OUK fastq reads ENCSR160QYK ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATAD2A-human ENCAB255TQH DNA False 2017-09-28 ENCODE 2 1 100 paired-ended 1 ENCFF164NLU 3178895397 Michael Snyder, Stanford b05e442bc3e9504c969bea8d0cfba70a SRA:SRR6212863 https://www.encodeproject.org/files/ENCFF762OUK/@@download/ENCFF762OUK.fastq.gz Illumina HiSeq 2000 /files/ENCFF240DTE/ released missing control alignments ENCFF164NLU fastq reads ENCSR160QYK ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATAD2A-human ENCAB255TQH DNA False 2017-09-28 ENCODE 2 1 100 paired-ended 2 ENCFF762OUK 3217290223 Michael Snyder, Stanford c77883bcd7f4488f809be6f21ee58426 SRA:SRR6212863 https://www.encodeproject.org/files/ENCFF164NLU/@@download/ENCFF164NLU.fastq.gz Illumina HiSeq 2000 /files/ENCFF608MDV/ released missing control alignments ENCFF170KIF bam unfiltered alignments ENCSR160QYK ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATAD2A-human ENCAB255TQH DNA False 2017-09-28 ENCODE 2 100 ENCFF164NLU, ENCFF762OUK, ENCFF807MUK 6767028399 ENCODE Processing Pipeline 77ff38b0b2db57292cd40b7e527012aa https://www.encodeproject.org/files/ENCFF170KIF/@@download/ENCFF170KIF.bam hg19 released missing control alignments ENCFF073PLZ bam unfiltered alignments ENCSR160QYK ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATAD2A-human ENCAB255TQH DNA False 2017-09-28 ENCODE 1 100 ENCFF076CUB, ENCFF160GSI, ENCFF807MUK 6901029136 ENCODE Processing Pipeline 3ac50bd16f07c4fe113b722dc0bc731e https://www.encodeproject.org/files/ENCFF073PLZ/@@download/ENCFF073PLZ.bam hg19 released missing control alignments ENCFF372DMD bam unfiltered alignments ENCSR160QYK ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATAD2A-human ENCAB255TQH DNA False 2017-09-28 ENCODE 2 100 ENCFF164NLU, ENCFF643CGH, ENCFF762OUK 6771849195 ENCODE Processing Pipeline 41ca29ab054193fe46d0d58558790b19 https://www.encodeproject.org/files/ENCFF372DMD/@@download/ENCFF372DMD.bam GRCh38 released missing control alignments ENCFF618BLM bam unfiltered alignments ENCSR160QYK ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATAD2A-human ENCAB255TQH DNA False 2017-09-28 ENCODE 1 100 ENCFF076CUB, ENCFF160GSI, ENCFF643CGH 6906066771 ENCODE Processing Pipeline 1715cb6a6bb7090d2a7a736e07a5f53d https://www.encodeproject.org/files/ENCFF618BLM/@@download/ENCFF618BLM.bam GRCh38 released missing control alignments ENCFF358AIJ bam alignments ENCSR160QYK ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATAD2A-human ENCAB255TQH DNA False 2017-09-28 ENCODE 2 100 ENCFF164NLU, ENCFF643CGH, ENCFF762OUK 5529535355 ENCODE Processing Pipeline 242be94d9320a8b27c152687ba075588 https://www.encodeproject.org/files/ENCFF358AIJ/@@download/ENCFF358AIJ.bam GRCh38 released missing control alignments ENCFF152YRC bam alignments ENCSR160QYK ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATAD2A-human ENCAB255TQH DNA False 2017-09-28 ENCODE 2 100 ENCFF164NLU, ENCFF762OUK, ENCFF807MUK 5526568143 ENCODE Processing Pipeline 5ee48ad0eb31cb536b68a548a617f9bc https://www.encodeproject.org/files/ENCFF152YRC/@@download/ENCFF152YRC.bam hg19 released missing control alignments ENCFF279CMU bam alignments ENCSR160QYK ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATAD2A-human ENCAB255TQH DNA False 2017-09-28 ENCODE 1 100 ENCFF076CUB, ENCFF160GSI, ENCFF807MUK 5486539485 ENCODE Processing Pipeline 621c5869629cffe9ff7cabb12adef119 https://www.encodeproject.org/files/ENCFF279CMU/@@download/ENCFF279CMU.bam hg19 released missing control alignments ENCFF752QAV bam alignments ENCSR160QYK ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATAD2A-human ENCAB255TQH DNA False 2017-09-28 ENCODE 1 100 ENCFF076CUB, ENCFF160GSI, ENCFF643CGH 5490983413 ENCODE Processing Pipeline 04a71ee2c50dbd788ecfa95870aa2977 https://www.encodeproject.org/files/ENCFF752QAV/@@download/ENCFF752QAV.bam GRCh38 released missing control alignments ENCFF454UYV bigWig signal p-value ENCSR160QYK ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATAD2A-human ENCAB255TQH DNA False 2017-09-28 ENCODE 1, 2 ENCFF152YRC, ENCFF262CJE, ENCFF279CMU, ENCFF506DFV 1932308961 ENCODE Processing Pipeline 8a7098e3219cf65255bf44ac48756d02 https://www.encodeproject.org/files/ENCFF454UYV/@@download/ENCFF454UYV.bigWig hg19 released missing control alignments ENCFF091SVZ bed narrowPeak peaks ENCSR160QYK ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATAD2A-human ENCAB255TQH DNA False 2017-09-28 ENCODE 2 ENCFF152YRC, ENCFF262CJE, ENCFF506DFV 6856226 ENCODE Processing Pipeline 4e7a4ded12661478c26f98ae7f2cf478 https://www.encodeproject.org/files/ENCFF091SVZ/@@download/ENCFF091SVZ.bed.gz hg19 released missing control alignments ENCFF269YNO bigWig fold change over control ENCSR160QYK ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATAD2A-human ENCAB255TQH DNA False 2017-09-28 ENCODE 1, 2 ENCFF152YRC, ENCFF262CJE, ENCFF279CMU, ENCFF506DFV 2095261190 ENCODE Processing Pipeline d63c896880181ba6412e6338c7f4e90e https://www.encodeproject.org/files/ENCFF269YNO/@@download/ENCFF269YNO.bigWig hg19 released missing control alignments ENCFF958FLX bigWig signal p-value ENCSR160QYK ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATAD2A-human ENCAB255TQH DNA False 2017-09-28 ENCODE 1 ENCFF262CJE, ENCFF279CMU, ENCFF506DFV 1274403768 ENCODE Processing Pipeline f3d6d0bd0a38fd84eb0e00ffaa71753b https://www.encodeproject.org/files/ENCFF958FLX/@@download/ENCFF958FLX.bigWig hg19 released missing control alignments ENCFF009XQL bigBed narrowPeak peaks ENCSR160QYK ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATAD2A-human ENCAB255TQH DNA False 2017-09-28 ENCODE 1 ENCFF618ORM 13365376 ENCODE Processing Pipeline f54bee97b25d9f498268fd691c6e5589 https://www.encodeproject.org/files/ENCFF009XQL/@@download/ENCFF009XQL.bigBed hg19 released missing control alignments ENCFF155RQK bigBed narrowPeak peaks ENCSR160QYK ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATAD2A-human ENCAB255TQH DNA False 2017-09-28 ENCODE 2 ENCFF091SVZ 13275445 ENCODE Processing Pipeline 13b194c8fdcd401e007171d06cf48abd https://www.encodeproject.org/files/ENCFF155RQK/@@download/ENCFF155RQK.bigBed hg19 released missing control alignments ENCFF804TFY bigBed narrowPeak peaks ENCSR160QYK ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATAD2A-human ENCAB255TQH DNA False 2017-09-28 ENCODE 1, 2 ENCFF797ZNP 13179970 ENCODE Processing Pipeline b0f4915f34f8cb6d6eacceae4d6e7944 https://www.encodeproject.org/files/ENCFF804TFY/@@download/ENCFF804TFY.bigBed hg19 released missing control alignments ENCFF185CUE bigWig fold change over control ENCSR160QYK ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATAD2A-human ENCAB255TQH DNA False 2017-09-28 ENCODE 1 ENCFF262CJE, ENCFF279CMU, ENCFF506DFV 1501069205 ENCODE Processing Pipeline 1c3d0c37e4203e6f3e49818f4dd0bbb0 https://www.encodeproject.org/files/ENCFF185CUE/@@download/ENCFF185CUE.bigWig hg19 released missing control alignments ENCFF391IQL bigWig signal p-value ENCSR160QYK ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATAD2A-human ENCAB255TQH DNA False 2017-09-28 ENCODE 2 ENCFF152YRC, ENCFF262CJE, ENCFF506DFV 1538100440 ENCODE Processing Pipeline d5695cfc0ec0a76edebdce829b98fda4 https://www.encodeproject.org/files/ENCFF391IQL/@@download/ENCFF391IQL.bigWig hg19 released missing control alignments ENCFF284SLE bigWig fold change over control ENCSR160QYK ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATAD2A-human ENCAB255TQH DNA False 2017-09-28 ENCODE 2 ENCFF152YRC, ENCFF262CJE, ENCFF506DFV 1496800827 ENCODE Processing Pipeline 3d3f27c1e8c34beeb75fb4badffac0eb https://www.encodeproject.org/files/ENCFF284SLE/@@download/ENCFF284SLE.bigWig hg19 released missing control alignments ENCFF618ORM bed narrowPeak peaks ENCSR160QYK ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATAD2A-human ENCAB255TQH DNA False 2017-09-28 ENCODE 1 ENCFF262CJE, ENCFF279CMU, ENCFF506DFV 6695600 ENCODE Processing Pipeline fd82e2ffab70d020916fc31f1e944d4d https://www.encodeproject.org/files/ENCFF618ORM/@@download/ENCFF618ORM.bed.gz hg19 released missing control alignments ENCFF797ZNP bed narrowPeak peaks ENCSR160QYK ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATAD2A-human ENCAB255TQH DNA False 2017-09-28 ENCODE 1, 2 ENCFF152YRC, ENCFF262CJE, ENCFF279CMU, ENCFF506DFV 7251282 ENCODE Processing Pipeline c8b487a5b3ee95432156f38f33682a29 https://www.encodeproject.org/files/ENCFF797ZNP/@@download/ENCFF797ZNP.bed.gz hg19 released missing control alignments ENCFF548QSU bigBed narrowPeak conservative idr thresholded peaks ENCSR160QYK ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATAD2A-human ENCAB255TQH DNA False 2017-09-28 ENCODE 1, 2 ENCFF987JFX 456920 ENCODE Processing Pipeline f514bcae2d315138f3ffd1ce9f21019c https://www.encodeproject.org/files/ENCFF548QSU/@@download/ENCFF548QSU.bigBed hg19 released missing control alignments ENCFF641FHU bigBed narrowPeak optimal idr thresholded peaks ENCSR160QYK ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATAD2A-human ENCAB255TQH DNA False 2017-09-28 ENCODE 1, 2 ENCFF253FZN 577908 ENCODE Processing Pipeline c47a46e387f7aa065337eb574a36557d https://www.encodeproject.org/files/ENCFF641FHU/@@download/ENCFF641FHU.bigBed hg19 released missing control alignments ENCFF253FZN bed narrowPeak optimal idr thresholded peaks ENCSR160QYK ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATAD2A-human ENCAB255TQH DNA False 2017-09-28 ENCODE 1, 2 ENCFF001TDO, ENCFF091SVZ, ENCFF618ORM, ENCFF797ZNP 283170 ENCODE Processing Pipeline 3cc7e08b654255b1a17d4805f8bf51d1 https://www.encodeproject.org/files/ENCFF253FZN/@@download/ENCFF253FZN.bed.gz hg19 released missing control alignments ENCFF987JFX bed narrowPeak conservative idr thresholded peaks ENCSR160QYK ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATAD2A-human ENCAB255TQH DNA False 2017-09-28 ENCODE 1, 2 ENCFF001TDO, ENCFF091SVZ, ENCFF618ORM, ENCFF797ZNP 208406 ENCODE Processing Pipeline 3668f7aca7d070b5501f345b29806e3d https://www.encodeproject.org/files/ENCFF987JFX/@@download/ENCFF987JFX.bed.gz hg19 released missing control alignments ENCFF642QPU bed narrowPeak peaks ENCSR160QYK ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATAD2A-human ENCAB255TQH DNA False 2017-09-28 ENCODE 2 ENCFF358AIJ 6860984 ENCODE Processing Pipeline 1d222ceb57eae8c81d6ff7726c2791dd https://www.encodeproject.org/files/ENCFF642QPU/@@download/ENCFF642QPU.bed.gz GRCh38 released missing control alignments ENCFF854LGO bed narrowPeak peaks ENCSR160QYK ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATAD2A-human ENCAB255TQH DNA False 2017-09-28 ENCODE 1, 2 ENCFF358AIJ, ENCFF752QAV 7265411 ENCODE Processing Pipeline 9496c98b99f19ae45b315989764d4aa5 https://www.encodeproject.org/files/ENCFF854LGO/@@download/ENCFF854LGO.bed.gz GRCh38 released missing control alignments ENCFF993VFQ bigBed narrowPeak conservative idr thresholded peaks ENCSR160QYK ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATAD2A-human ENCAB255TQH DNA False 2017-09-28 ENCODE 1, 2 ENCFF407WIN 461517 ENCODE Processing Pipeline 3130f9c160bd858e24d6972fb2e20d9f https://www.encodeproject.org/files/ENCFF993VFQ/@@download/ENCFF993VFQ.bigBed GRCh38 released missing control alignments ENCFF690RXL bigWig signal p-value ENCSR160QYK ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATAD2A-human ENCAB255TQH DNA False 2017-09-28 ENCODE 1 ENCFF752QAV 1511711292 ENCODE Processing Pipeline 363a4d49241232070e74cf083759c41d https://www.encodeproject.org/files/ENCFF690RXL/@@download/ENCFF690RXL.bigWig GRCh38 released missing control alignments ENCFF903BAS bigWig signal p-value ENCSR160QYK ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATAD2A-human ENCAB255TQH DNA False 2017-09-28 ENCODE 2 ENCFF358AIJ 1498392540 ENCODE Processing Pipeline 16f14270b7e7a4d106a87c7168f76820 https://www.encodeproject.org/files/ENCFF903BAS/@@download/ENCFF903BAS.bigWig GRCh38 released missing control alignments ENCFF083UHR bed narrowPeak peaks ENCSR160QYK ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATAD2A-human ENCAB255TQH DNA False 2017-09-28 ENCODE 1 ENCFF752QAV 6701785 ENCODE Processing Pipeline 83533ed2e5dda44908aed11e666a5252 https://www.encodeproject.org/files/ENCFF083UHR/@@download/ENCFF083UHR.bed.gz GRCh38 released missing control alignments ENCFF407WIN bed narrowPeak conservative idr thresholded peaks ENCSR160QYK ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATAD2A-human ENCAB255TQH DNA False 2017-09-28 ENCODE 1, 2 ENCFF083UHR, ENCFF419RSJ, ENCFF642QPU, ENCFF854LGO 210272 ENCODE Processing Pipeline 33e0239a399f900ebc8bfece3654db79 https://www.encodeproject.org/files/ENCFF407WIN/@@download/ENCFF407WIN.bed.gz GRCh38 released missing control alignments ENCFF671IKS bigBed narrowPeak peaks ENCSR160QYK ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATAD2A-human ENCAB255TQH DNA False 2017-09-28 ENCODE 1, 2 ENCFF854LGO 13188255 ENCODE Processing Pipeline 7f775c4cf444d31c8459c37a487f3207 https://www.encodeproject.org/files/ENCFF671IKS/@@download/ENCFF671IKS.bigBed GRCh38 released missing control alignments ENCFF591ERS bigWig fold change over control ENCSR160QYK ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATAD2A-human ENCAB255TQH DNA False 2017-09-28 ENCODE 1 ENCFF752QAV 1495954442 ENCODE Processing Pipeline 208b074fb1c5fd34c5121a9338ea1705 https://www.encodeproject.org/files/ENCFF591ERS/@@download/ENCFF591ERS.bigWig GRCh38 released missing control alignments ENCFF438XQD bigBed narrowPeak optimal idr thresholded peaks ENCSR160QYK ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATAD2A-human ENCAB255TQH DNA False 2017-09-28 ENCODE 1, 2 ENCFF950ZWP 568780 ENCODE Processing Pipeline 93b2ab32458e2b7cf0186212ef9c7d87 https://www.encodeproject.org/files/ENCFF438XQD/@@download/ENCFF438XQD.bigBed GRCh38 released missing control alignments ENCFF714OII bigWig fold change over control ENCSR160QYK ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATAD2A-human ENCAB255TQH DNA False 2017-09-28 ENCODE 1, 2 ENCFF358AIJ, ENCFF752QAV 2089893858 ENCODE Processing Pipeline 7d617c4db92145dd742c1a58dab001ee https://www.encodeproject.org/files/ENCFF714OII/@@download/ENCFF714OII.bigWig GRCh38 released missing control alignments ENCFF116YHT bigBed narrowPeak peaks ENCSR160QYK ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATAD2A-human ENCAB255TQH DNA False 2017-09-28 ENCODE 2 ENCFF642QPU 13293654 ENCODE Processing Pipeline e44fc46775eb5eb01e9c0713aa02c2ba https://www.encodeproject.org/files/ENCFF116YHT/@@download/ENCFF116YHT.bigBed GRCh38 released missing control alignments ENCFF950ZWP bed narrowPeak optimal idr thresholded peaks ENCSR160QYK ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATAD2A-human ENCAB255TQH DNA False 2017-09-28 ENCODE 1, 2 ENCFF083UHR, ENCFF419RSJ, ENCFF642QPU, ENCFF854LGO 277248 ENCODE Processing Pipeline 8117fabe58b052c163d80a8ed93d2451 https://www.encodeproject.org/files/ENCFF950ZWP/@@download/ENCFF950ZWP.bed.gz GRCh38 released missing control alignments ENCFF975GDE bigWig signal p-value ENCSR160QYK ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATAD2A-human ENCAB255TQH DNA False 2017-09-28 ENCODE 1, 2 ENCFF358AIJ, ENCFF752QAV 1929751091 ENCODE Processing Pipeline 61ba3fdfe32cd8a0a7ec85f37a08d326 https://www.encodeproject.org/files/ENCFF975GDE/@@download/ENCFF975GDE.bigWig GRCh38 released missing control alignments ENCFF693JFQ bigWig fold change over control ENCSR160QYK ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATAD2A-human ENCAB255TQH DNA False 2017-09-28 ENCODE 2 ENCFF358AIJ 1520174001 ENCODE Processing Pipeline 3847a20da32bb707481b81d642660059 https://www.encodeproject.org/files/ENCFF693JFQ/@@download/ENCFF693JFQ.bigWig GRCh38 released missing control alignments ENCFF182VWV bigBed narrowPeak peaks ENCSR160QYK ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATAD2A-human ENCAB255TQH DNA False 2017-09-28 ENCODE 1 ENCFF083UHR 13383016 ENCODE Processing Pipeline 98a8f31980c2813f402d51559d33f4e8 https://www.encodeproject.org/files/ENCFF182VWV/@@download/ENCFF182VWV.bigBed GRCh38 released missing control alignments ENCFF000BUU bigBed broadPeak peaks ENCSR000ATT ChIP-seq EFO:0002067 K562 cell line Homo sapiens CREBBP-human ENCAB000AEU DNA see document see document False 2012-08-06 ENCODE ENCFF001SYU 726270 Bradley Bernstein, Broad c8d2aef2d95c5923c26484baa908b9ce https://www.encodeproject.org/files/ENCFF000BUU/@@download/ENCFF000BUU.bigBed hg19 archived control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, low read length ENCFF000BUV bam alignments ENCSR000ATT ChIP-seq EFO:0002067 K562 cell line Homo sapiens CREBBP-human ENCAB000AEU DNA see document see document False 2012-08-06 ENCODE 1 ENCFF000BVH 874158593 Bradley Bernstein, Broad 077bd419474c3a7efb00721cb759d76b https://www.encodeproject.org/files/ENCFF000BUV/@@download/ENCFF000BUV.bam hg19 archived control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, low read length ENCFF000BUW bigWig signal ENCSR000ATT ChIP-seq EFO:0002067 K562 cell line Homo sapiens CREBBP-human ENCAB000AEU DNA see document see document False 2012-08-06 ENCODE 312585797 Bradley Bernstein, Broad 15d6d60d68ced93bcfa5c2731fd82c03 https://www.encodeproject.org/files/ENCFF000BUW/@@download/ENCFF000BUW.bigWig hg19 archived control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, low read length missing derived_from ENCFF000BVH fastq reads ENCSR000ATT ChIP-seq EFO:0002067 K562 cell line Homo sapiens CREBBP-human ENCAB000AEU DNA see document see document False 2012-08-06 ENCODE 1 1 36 single-ended 1240833353 Bradley Bernstein, Broad a30c631ec4ae56aa986f0dfa9211f464 https://www.encodeproject.org/files/ENCFF000BVH/@@download/ENCFF000BVH.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000BWK/ released control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, low read length ENCFF001SYU bed broadPeak peaks ENCSR000ATT ChIP-seq EFO:0002067 K562 cell line Homo sapiens CREBBP-human ENCAB000AEU DNA see document see document False 2012-08-06 ENCODE 407277 Bradley Bernstein, Broad b420e272f8f4d93943a941c44f90905f https://www.encodeproject.org/files/ENCFF001SYU/@@download/ENCFF001SYU.bed.gz hg19 archived control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, low read length missing derived_from ENCFF922CFI bam unfiltered alignments ENCSR000ATT ChIP-seq EFO:0002067 K562 cell line Homo sapiens CREBBP-human ENCAB000AEU DNA see document see document False 2012-08-06 ENCODE 1 36 ENCFF000BVH, ENCFF807MUK 1527720227 ENCODE Processing Pipeline 2f9b3d3888f5b881c6d3bcfb0cc35730 https://www.encodeproject.org/files/ENCFF922CFI/@@download/ENCFF922CFI.bam hg19 released control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, low read length ENCFF998RRV bam alignments ENCSR000ATT ChIP-seq EFO:0002067 K562 cell line Homo sapiens CREBBP-human ENCAB000AEU DNA see document see document False 2012-08-06 ENCODE 1 36 ENCFF000BVH, ENCFF807MUK 664927102 ENCODE Processing Pipeline ff5e5d859c9611b2ddbc3088dca7f74a https://www.encodeproject.org/files/ENCFF998RRV/@@download/ENCFF998RRV.bam hg19 released control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, low read length ENCFF536AIG bam alignments ENCSR000ATT ChIP-seq EFO:0002067 K562 cell line Homo sapiens CREBBP-human ENCAB000AEU DNA see document see document False 2012-08-06 ENCODE 1 36 ENCFF000BVH, ENCFF643CGH 664748579 ENCODE Processing Pipeline 0763775ea7689145daff2b72a586ea3c https://www.encodeproject.org/files/ENCFF536AIG/@@download/ENCFF536AIG.bam GRCh38 released control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, low read length ENCFF262DAG bam unfiltered alignments ENCSR000ATT ChIP-seq EFO:0002067 K562 cell line Homo sapiens CREBBP-human ENCAB000AEU DNA see document see document False 2012-08-06 ENCODE 1 36 ENCFF000BVH, ENCFF643CGH 1533858125 ENCODE Processing Pipeline d572eb81689a0da04e7fc8161e3de04b https://www.encodeproject.org/files/ENCFF262DAG/@@download/ENCFF262DAG.bam GRCh38 released control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, low read length ENCFF369HGX bed narrowPeak pseudoreplicated idr thresholded peaks ENCSR000ATT ChIP-seq EFO:0002067 K562 cell line Homo sapiens CREBBP-human ENCAB000AEU DNA see document see document False 2012-08-06 ENCODE 1 ENCFF001TDO, ENCFF305PBB 12477 ENCODE Processing Pipeline 53b27b5f2e085bbaa47aed2295b76e6c https://www.encodeproject.org/files/ENCFF369HGX/@@download/ENCFF369HGX.bed.gz hg19 released control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, low read length ENCFF789VXL bigWig signal p-value ENCSR000ATT ChIP-seq EFO:0002067 K562 cell line Homo sapiens CREBBP-human ENCAB000AEU DNA see document see document False 2012-08-06 ENCODE 1 ENCFF392XRJ, ENCFF536AIG 333260194 ENCODE Processing Pipeline 3948cfb1b48d415d46df3848e7f248a2 https://www.encodeproject.org/files/ENCFF789VXL/@@download/ENCFF789VXL.bigWig GRCh38 released control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, low read length ENCFF731URO bigBed narrowPeak pseudoreplicated idr thresholded peaks ENCSR000ATT ChIP-seq EFO:0002067 K562 cell line Homo sapiens CREBBP-human ENCAB000AEU DNA see document see document False 2012-08-06 ENCODE 1 ENCFF678FRK 65106 ENCODE Processing Pipeline 1b576f5d75eee8a3c9961219bf279be7 https://www.encodeproject.org/files/ENCFF731URO/@@download/ENCFF731URO.bigBed GRCh38 released control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, low read length ENCFF799JLV bigWig signal p-value ENCSR000ATT ChIP-seq EFO:0002067 K562 cell line Homo sapiens CREBBP-human ENCAB000AEU DNA see document see document False 2012-08-06 ENCODE 1 ENCFF574XYY, ENCFF998RRV 333397384 ENCODE Processing Pipeline 0421d7cd1a190faed15ee4ad8b54aa21 https://www.encodeproject.org/files/ENCFF799JLV/@@download/ENCFF799JLV.bigWig hg19 released control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, low read length ENCFF596HUV bigBed narrowPeak peaks ENCSR000ATT ChIP-seq EFO:0002067 K562 cell line Homo sapiens CREBBP-human ENCAB000AEU DNA see document see document False 2012-08-06 ENCODE 1 ENCFF305PBB 10465730 ENCODE Processing Pipeline 01317b2207e37ea6d84646826537f3b6 https://www.encodeproject.org/files/ENCFF596HUV/@@download/ENCFF596HUV.bigBed hg19 released control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, low read length ENCFF687CDG bed narrowPeak peaks ENCSR000ATT ChIP-seq EFO:0002067 K562 cell line Homo sapiens CREBBP-human ENCAB000AEU DNA see document see document False 2012-08-06 ENCODE 1 ENCFF392XRJ, ENCFF536AIG 4004669 ENCODE Processing Pipeline c6c3f39d696e34016726b1bb4e11b910 https://www.encodeproject.org/files/ENCFF687CDG/@@download/ENCFF687CDG.bed.gz GRCh38 released control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, low read length ENCFF305PBB bed narrowPeak peaks ENCSR000ATT ChIP-seq EFO:0002067 K562 cell line Homo sapiens CREBBP-human ENCAB000AEU DNA see document see document False 2012-08-06 ENCODE 1 ENCFF574XYY, ENCFF998RRV 4040715 ENCODE Processing Pipeline 7fab496ccb08db39f132bd14491389ff https://www.encodeproject.org/files/ENCFF305PBB/@@download/ENCFF305PBB.bed.gz hg19 released control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, low read length ENCFF385GZL bigBed narrowPeak peaks ENCSR000ATT ChIP-seq EFO:0002067 K562 cell line Homo sapiens CREBBP-human ENCAB000AEU DNA see document see document False 2012-08-06 ENCODE 1 ENCFF687CDG 10419518 ENCODE Processing Pipeline ce208271e9420660ad6b674494b3f360 https://www.encodeproject.org/files/ENCFF385GZL/@@download/ENCFF385GZL.bigBed GRCh38 released control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, low read length ENCFF678FRK bed narrowPeak pseudoreplicated idr thresholded peaks ENCSR000ATT ChIP-seq EFO:0002067 K562 cell line Homo sapiens CREBBP-human ENCAB000AEU DNA see document see document False 2012-08-06 ENCODE 1 ENCFF419RSJ, ENCFF687CDG 12692 ENCODE Processing Pipeline 9efea9cedc30b13f946fb541893057bc https://www.encodeproject.org/files/ENCFF678FRK/@@download/ENCFF678FRK.bed.gz GRCh38 released control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, low read length ENCFF813TKO bigWig fold change over control ENCSR000ATT ChIP-seq EFO:0002067 K562 cell line Homo sapiens CREBBP-human ENCAB000AEU DNA see document see document False 2012-08-06 ENCODE 1 ENCFF574XYY, ENCFF998RRV 285121886 ENCODE Processing Pipeline 712b5e0a3aa1bdf03a56444526d19025 https://www.encodeproject.org/files/ENCFF813TKO/@@download/ENCFF813TKO.bigWig hg19 released control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, low read length ENCFF232YJG bigBed narrowPeak pseudoreplicated idr thresholded peaks ENCSR000ATT ChIP-seq EFO:0002067 K562 cell line Homo sapiens CREBBP-human ENCAB000AEU DNA see document see document False 2012-08-06 ENCODE 1 ENCFF369HGX 63618 ENCODE Processing Pipeline 029c8c18f24249cf304872b3f68ea252 https://www.encodeproject.org/files/ENCFF232YJG/@@download/ENCFF232YJG.bigBed hg19 released control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, low read length ENCFF151HDM bigWig fold change over control ENCSR000ATT ChIP-seq EFO:0002067 K562 cell line Homo sapiens CREBBP-human ENCAB000AEU DNA see document see document False 2012-08-06 ENCODE 1 ENCFF392XRJ, ENCFF536AIG 283830340 ENCODE Processing Pipeline ec81d4cb865f87db20fa2c0f0078f6f6 https://www.encodeproject.org/files/ENCFF151HDM/@@download/ENCFF151HDM.bigWig GRCh38 released control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, low read length ENCFF000BWB bam alignments ENCSR000AKO ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCF-human ENCAB000AXY DNA see document see document False 2011-02-10 ENCODE 1 ENCFF000BWM 617227989 Bradley Bernstein, Broad cb5a5fc42a0d976476272e7062e6ba19 https://www.encodeproject.org/files/ENCFF000BWB/@@download/ENCFF000BWB.bam hg19 released mixed read lengths, control low read depth, inconsistent platforms, mild to moderate bottlenecking, low read length insufficient read depth ENCFF000BWC bam alignments ENCSR000AKO ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCF-human ENCAB000AXY DNA see document see document False 2011-02-10 ENCODE 2 ENCFF000BWR 454281342 Bradley Bernstein, Broad d611d261ac269a700cc6fc069af1ad6d https://www.encodeproject.org/files/ENCFF000BWC/@@download/ENCFF000BWC.bam hg19 released mixed read lengths, control low read depth, inconsistent platforms, mild to moderate bottlenecking, low read length insufficient read depth ENCFF000BWD bigBed broadPeak peaks ENCSR000AKO ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCF-human ENCAB000AXY DNA see document see document False 2011-02-10 ENCODE ENCFF001SZB 2467007 Bradley Bernstein, Broad 97cf15678beb13bfb879a126f3091759 https://www.encodeproject.org/files/ENCFF000BWD/@@download/ENCFF000BWD.bigBed hg19 released mixed read lengths, control low read depth, inconsistent platforms, mild to moderate bottlenecking, low read length insufficient read depth ENCFF000BWF bigWig signal ENCSR000AKO ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCF-human ENCAB000AXY DNA see document see document False 2011-02-10 ENCODE 352793452 Bradley Bernstein, Broad 48b7abb9bd3fa7935f0f9a5043bfb59e https://www.encodeproject.org/files/ENCFF000BWF/@@download/ENCFF000BWF.bigWig hg19 released mixed read lengths, control low read depth, inconsistent platforms, mild to moderate bottlenecking, low read length missing derived_from insufficient read depth ENCFF000BWM fastq reads ENCSR000AKO ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCF-human ENCAB000AXY DNA see document see document False 2011-02-10 ENCODE 1 1 36 single-ended 812284748 Bradley Bernstein, Broad ad037f197b2c3222ff43c5f0ba0f911d https://www.encodeproject.org/files/ENCFF000BWM/@@download/ENCFF000BWM.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000BWK/ released mixed read lengths, control low read depth, inconsistent platforms, mild to moderate bottlenecking, low read length insufficient read depth ENCFF000BWR fastq reads ENCSR000AKO ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCF-human ENCAB000AXY DNA see document see document False 2011-02-10 ENCODE 2 1 51 single-ended 735849744 Bradley Bernstein, Broad 4a645fe6896b8520f1c4cc68c8255eda https://www.encodeproject.org/files/ENCFF000BWR/@@download/ENCFF000BWR.fastq.gz Illumina Genome Analyzer IIe /files/ENCFF000BWK/ released control low read depth, inconsistent platforms, mixed read lengths, mild to moderate bottlenecking, inconsistent control read length, low read length insufficient read depth ENCFF001SZB bed broadPeak peaks ENCSR000AKO ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCF-human ENCAB000AXY DNA see document see document False 2011-02-10 ENCODE 1323565 Bradley Bernstein, Broad 905a8320cd3c7e37a4244360f8e34306 https://www.encodeproject.org/files/ENCFF001SZB/@@download/ENCFF001SZB.bed.gz hg19 released mixed read lengths, control low read depth, inconsistent platforms, mild to moderate bottlenecking, low read length missing derived_from insufficient read depth ENCFF002CEL bed narrowPeak optimal idr thresholded peaks ENCSR000AKO ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCF-human ENCAB000AXY DNA see document see document False 2011-02-10 ENCODE 1231983 ENCODE Consortium Analysis Working Group 7ddb20610be6d90b16f37e167c79f019 https://www.encodeproject.org/files/ENCFF002CEL/@@download/ENCFF002CEL.bed.gz hg19 released mixed read lengths, control low read depth, inconsistent platforms, mild to moderate bottlenecking, low read length missing derived_from insufficient read depth ENCFF362OLT bigBed narrowPeak optimal idr thresholded peaks ENCSR000AKO ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCF-human ENCAB000AXY DNA see document see document False 2011-02-10 ENCODE ENCFF002CEL 2744790 ENCODE Consortium 033329040479d6643b789f371d747cea https://www.encodeproject.org/files/ENCFF362OLT/@@download/ENCFF362OLT.bigBed hg19 released mixed read lengths, control low read depth, inconsistent platforms, mild to moderate bottlenecking, low read length insufficient read depth ENCFF156TWN bam unfiltered alignments ENCSR000AKO ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCF-human ENCAB000AXY DNA see document see document False 2011-02-10 ENCODE 2 36 ENCFF000BWR, ENCFF643CGH 635103244 ENCODE Processing Pipeline 3952492293c53a8a2759f67caa924fb6 https://www.encodeproject.org/files/ENCFF156TWN/@@download/ENCFF156TWN.bam GRCh38 released mixed read lengths, control low read depth, inconsistent platforms, mild to moderate bottlenecking, low read length insufficient read depth ENCFF477OGN bam unfiltered alignments ENCSR000AKO ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCF-human ENCAB000AXY DNA see document see document False 2011-02-10 ENCODE 1 36 ENCFF000BWM, ENCFF643CGH 974964076 ENCODE Processing Pipeline 9850a1848ffc2417bf33843091fc8ce9 https://www.encodeproject.org/files/ENCFF477OGN/@@download/ENCFF477OGN.bam GRCh38 released mixed read lengths, control low read depth, inconsistent platforms, mild to moderate bottlenecking, low read length insufficient read depth ENCFF871GXE bam alignments ENCSR000AKO ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCF-human ENCAB000AXY DNA see document see document False 2011-02-10 ENCODE 1 36 ENCFF000BWM, ENCFF643CGH 361167135 ENCODE Processing Pipeline f2a54720aa697bf3488d7426e8b588ba https://www.encodeproject.org/files/ENCFF871GXE/@@download/ENCFF871GXE.bam GRCh38 released mixed read lengths, control low read depth, inconsistent platforms, mild to moderate bottlenecking, low read length insufficient read depth ENCFF550BMQ bam alignments ENCSR000AKO ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCF-human ENCAB000AXY DNA see document see document False 2011-02-10 ENCODE 2 36 ENCFF000BWR, ENCFF643CGH 318523205 ENCODE Processing Pipeline a22e331e1d9ff11dfc012eae706e62cc https://www.encodeproject.org/files/ENCFF550BMQ/@@download/ENCFF550BMQ.bam GRCh38 released mixed read lengths, control low read depth, inconsistent platforms, mild to moderate bottlenecking, low read length insufficient read depth ENCFF370UYP bigWig fold change over control ENCSR000AKO ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCF-human ENCAB000AXY DNA see document see document False 2011-02-10 ENCODE 1 ENCFF392XRJ, ENCFF871GXE 145433959 ENCODE Processing Pipeline 751ff49c38b539a72bf13d1d57f2637f https://www.encodeproject.org/files/ENCFF370UYP/@@download/ENCFF370UYP.bigWig GRCh38 released mixed read lengths, control low read depth, inconsistent platforms, mild to moderate bottlenecking, low read length insufficient read depth ENCFF516LLG bigWig signal p-value ENCSR000AKO ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCF-human ENCAB000AXY DNA see document see document False 2011-02-10 ENCODE 1 ENCFF392XRJ, ENCFF871GXE 258620911 ENCODE Processing Pipeline 710458df49be7081bf62037af0e261d2 https://www.encodeproject.org/files/ENCFF516LLG/@@download/ENCFF516LLG.bigWig GRCh38 released mixed read lengths, control low read depth, inconsistent platforms, mild to moderate bottlenecking, low read length insufficient read depth ENCFF405AYC bigWig fold change over control ENCSR000AKO ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCF-human ENCAB000AXY DNA see document see document False 2011-02-10 ENCODE 1, 2 ENCFF392XRJ, ENCFF550BMQ, ENCFF871GXE 283235892 ENCODE Processing Pipeline a7aeeb0b7792c23f53efe6a586cdb87a https://www.encodeproject.org/files/ENCFF405AYC/@@download/ENCFF405AYC.bigWig GRCh38 released mixed read lengths, control low read depth, inconsistent platforms, mild to moderate bottlenecking, low read length insufficient read depth ENCFF044KHD bed narrowPeak peaks ENCSR000AKO ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCF-human ENCAB000AXY DNA see document see document False 2011-02-10 ENCODE 1 ENCFF392XRJ, ENCFF871GXE 3101805 ENCODE Processing Pipeline 2f2f9c0d38ebdeedb1c72d8c0b009710 https://www.encodeproject.org/files/ENCFF044KHD/@@download/ENCFF044KHD.bed.gz GRCh38 released mixed read lengths, control low read depth, inconsistent platforms, mild to moderate bottlenecking, low read length insufficient read depth ENCFF712ETC bed narrowPeak peaks ENCSR000AKO ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCF-human ENCAB000AXY DNA see document see document False 2011-02-10 ENCODE 2 ENCFF392XRJ, ENCFF550BMQ 4160754 ENCODE Processing Pipeline 03ad07720a9d5b9f61893c2ca50a10a2 https://www.encodeproject.org/files/ENCFF712ETC/@@download/ENCFF712ETC.bed.gz GRCh38 released mixed read lengths, control low read depth, inconsistent platforms, mild to moderate bottlenecking, low read length insufficient read depth ENCFF962EIP bigBed narrowPeak peaks ENCSR000AKO ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCF-human ENCAB000AXY DNA see document see document False 2011-02-10 ENCODE 2 ENCFF712ETC 8883728 ENCODE Processing Pipeline d8bc06018cb842f80e623c195c9c6c55 https://www.encodeproject.org/files/ENCFF962EIP/@@download/ENCFF962EIP.bigBed GRCh38 released mixed read lengths, control low read depth, inconsistent platforms, mild to moderate bottlenecking, low read length insufficient read depth ENCFF727BQT bigWig signal p-value ENCSR000AKO ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCF-human ENCAB000AXY DNA see document see document False 2011-02-10 ENCODE 2 ENCFF392XRJ, ENCFF550BMQ 306555654 ENCODE Processing Pipeline 9e35bea800b868104858bf240903f642 https://www.encodeproject.org/files/ENCFF727BQT/@@download/ENCFF727BQT.bigWig GRCh38 released mixed read lengths, control low read depth, inconsistent platforms, mild to moderate bottlenecking, low read length insufficient read depth ENCFF442ACI bigWig signal p-value ENCSR000AKO ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCF-human ENCAB000AXY DNA see document see document False 2011-02-10 ENCODE 1, 2 ENCFF392XRJ, ENCFF550BMQ, ENCFF871GXE 325586627 ENCODE Processing Pipeline 9435b22336d6e4590925961503447140 https://www.encodeproject.org/files/ENCFF442ACI/@@download/ENCFF442ACI.bigWig GRCh38 released mixed read lengths, control low read depth, inconsistent platforms, mild to moderate bottlenecking, low read length insufficient read depth ENCFF533HEK bigWig fold change over control ENCSR000AKO ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCF-human ENCAB000AXY DNA see document see document False 2011-02-10 ENCODE 2 ENCFF392XRJ, ENCFF550BMQ 183035726 ENCODE Processing Pipeline 414cc4e13e250240b4f0627a2c1d6302 https://www.encodeproject.org/files/ENCFF533HEK/@@download/ENCFF533HEK.bigWig GRCh38 released mixed read lengths, control low read depth, inconsistent platforms, mild to moderate bottlenecking, low read length insufficient read depth ENCFF519CXF bed narrowPeak optimal idr thresholded peaks ENCSR000AKO ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCF-human ENCAB000AXY DNA see document see document False 2011-02-10 ENCODE 1, 2 ENCFF044KHD, ENCFF419RSJ, ENCFF712ETC, ENCFF873LHT 873695 ENCODE Processing Pipeline 7828af6ccfcb579226ce54757b98f05b https://www.encodeproject.org/files/ENCFF519CXF/@@download/ENCFF519CXF.bed.gz GRCh38 released mixed read lengths, control low read depth, inconsistent platforms, mild to moderate bottlenecking, low read length insufficient read depth ENCFF873LHT bed narrowPeak peaks ENCSR000AKO ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCF-human ENCAB000AXY DNA see document see document False 2011-02-10 ENCODE 1, 2 ENCFF392XRJ, ENCFF550BMQ, ENCFF871GXE 5360130 ENCODE Processing Pipeline 4d84d257fff852f460889186b6e3f077 https://www.encodeproject.org/files/ENCFF873LHT/@@download/ENCFF873LHT.bed.gz GRCh38 released mixed read lengths, control low read depth, inconsistent platforms, mild to moderate bottlenecking, low read length insufficient read depth ENCFF604QOX bigBed narrowPeak peaks ENCSR000AKO ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCF-human ENCAB000AXY DNA see document see document False 2011-02-10 ENCODE 1 ENCFF044KHD 7156677 ENCODE Processing Pipeline b812791c8f68131db22cd02aca83e662 https://www.encodeproject.org/files/ENCFF604QOX/@@download/ENCFF604QOX.bigBed GRCh38 released mixed read lengths, control low read depth, inconsistent platforms, mild to moderate bottlenecking, low read length insufficient read depth ENCFF895HAG bigBed narrowPeak optimal idr thresholded peaks ENCSR000AKO ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCF-human ENCAB000AXY DNA see document see document False 2011-02-10 ENCODE 1, 2 ENCFF519CXF 1764282 ENCODE Processing Pipeline 6b5ff5541026a8df8bf09f4736c44e52 https://www.encodeproject.org/files/ENCFF895HAG/@@download/ENCFF895HAG.bigBed GRCh38 released mixed read lengths, control low read depth, inconsistent platforms, mild to moderate bottlenecking, low read length insufficient read depth ENCFF609MQG bigBed narrowPeak peaks ENCSR000AKO ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCF-human ENCAB000AXY DNA see document see document False 2011-02-10 ENCODE 1, 2 ENCFF873LHT 13303942 ENCODE Processing Pipeline 0fdca854e97061cb34329e4a9df87c8d https://www.encodeproject.org/files/ENCFF609MQG/@@download/ENCFF609MQG.bigBed GRCh38 released mixed read lengths, control low read depth, inconsistent platforms, mild to moderate bottlenecking, low read length insufficient read depth ENCFF000CBQ bigWig signal ENCSR000AUA ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB790JUW DNA see document see document False 2012-08-06 ENCODE 167902707 Bradley Bernstein, Broad 70547e2b4e717a7fb37992cfbd751982 https://www.encodeproject.org/files/ENCFF000CBQ/@@download/ENCFF000CBQ.bigWig hg19 archived inconsistent platforms, mild to moderate bottlenecking, low read length missing raw data in replicate, missing derived_from poor library complexity, insufficient read depth, severe bottlenecking ENCFF000CBR bigBed broadPeak peaks ENCSR000AUA ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB790JUW DNA see document see document False 2012-08-06 ENCODE ENCFF001TAC 785009 Bradley Bernstein, Broad 979838ae489d11ab98d94723261473a8 https://www.encodeproject.org/files/ENCFF000CBR/@@download/ENCFF000CBR.bigBed hg19 archived inconsistent platforms, mild to moderate bottlenecking, low read length missing raw data in replicate poor library complexity, insufficient read depth, severe bottlenecking ENCFF001QXD bam alignments ENCSR000AUA ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB790JUW DNA see document see document False 2012-08-06 ENCODE 1 1 1184064197 Bradley Bernstein, Broad 12fd132f96da682216c6a220334c1434 https://www.encodeproject.org/files/ENCFF001QXD/@@download/ENCFF001QXD.bam hg19 archived inconsistent platforms, mild to moderate bottlenecking, low read length missing raw data in replicate, missing derived_from poor library complexity, insufficient read depth, severe bottlenecking ENCFF001TAC bed broadPeak peaks ENCSR000AUA ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB790JUW DNA see document see document False 2012-08-06 ENCODE 407818 Bradley Bernstein, Broad 748b00b82b947f366e0c275d730203a4 https://www.encodeproject.org/files/ENCFF001TAC/@@download/ENCFF001TAC.bed.gz hg19 archived inconsistent platforms, mild to moderate bottlenecking, low read length missing raw data in replicate, missing derived_from poor library complexity, insufficient read depth, severe bottlenecking ENCFF941MBY fastq reads ENCSR000AUA ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB790JUW DNA see document see document False 2012-08-06 ENCODE 2 1 25 paired-ended 2 ENCFF641RSL 1198338660 Bradley Bernstein, Broad aaae6e2d3f2ff6fb11927eb6eb98500c https://www.encodeproject.org/files/ENCFF941MBY/@@download/ENCFF941MBY.fastq.gz Illumina HiSeq 2000 archived inconsistent platforms, mild to moderate bottlenecking, low read length missing raw data in replicate severe bottlenecking, poor library complexity, insufficient read depth, missing controlled_by ENCFF641RSL fastq reads ENCSR000AUA ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB790JUW DNA see document see document False 2012-08-06 ENCODE 2 1 25 paired-ended 1 ENCFF941MBY 1188575255 Bradley Bernstein, Broad 6f43d2cc6a2efb7608bcc436459a235c https://www.encodeproject.org/files/ENCFF641RSL/@@download/ENCFF641RSL.fastq.gz Illumina HiSeq 2000 archived inconsistent platforms, mild to moderate bottlenecking, low read length missing raw data in replicate missing controlled_by, poor library complexity, insufficient read depth, severe bottlenecking ENCFF797TCA fastq reads ENCSR000AUA ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB790JUW DNA see document see document False 2012-08-06 ENCODE 1 1 36 single-ended 1383467208 Bradley Bernstein, Broad 8dd831448d7b0e0b5259d2a34ecb6021 https://www.encodeproject.org/files/ENCFF797TCA/@@download/ENCFF797TCA.fastq.gz Illumina HiSeq 2000 /files/ENCFF000BWK/ released inconsistent platforms, mild to moderate bottlenecking, low read length missing raw data in replicate poor library complexity, insufficient read depth, severe bottlenecking ENCFF178EUH bam unfiltered alignments ENCSR000AUA ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB790JUW DNA see document see document False 2012-08-06 ENCODE 1 36 ENCFF797TCA, ENCFF807MUK 1611312634 ENCODE Processing Pipeline f07d123e06859295d007fa15fc014caa https://www.encodeproject.org/files/ENCFF178EUH/@@download/ENCFF178EUH.bam hg19 released inconsistent platforms, mild to moderate bottlenecking, low read length missing raw data in replicate poor library complexity, insufficient read depth, severe bottlenecking ENCFF821IRR bam alignments ENCSR000AUA ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB790JUW DNA see document see document False 2012-08-06 ENCODE 1 36 ENCFF797TCA, ENCFF807MUK 263249861 ENCODE Processing Pipeline e9e9aeecca1910088f399fe33f9043d5 https://www.encodeproject.org/files/ENCFF821IRR/@@download/ENCFF821IRR.bam hg19 released inconsistent platforms, mild to moderate bottlenecking, low read length missing raw data in replicate poor library complexity, insufficient read depth, severe bottlenecking ENCFF877IBV bam unfiltered alignments ENCSR000AUA ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB790JUW DNA see document see document False 2012-08-06 ENCODE 1 36 ENCFF643CGH, ENCFF797TCA 1623737891 ENCODE Processing Pipeline 0ab49e95996e3c4591a2d270781a7b74 https://www.encodeproject.org/files/ENCFF877IBV/@@download/ENCFF877IBV.bam GRCh38 released inconsistent platforms, mild to moderate bottlenecking, low read length missing raw data in replicate poor library complexity, insufficient read depth, severe bottlenecking ENCFF965ISU bam alignments ENCSR000AUA ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB790JUW DNA see document see document False 2012-08-06 ENCODE 1 36 ENCFF643CGH, ENCFF797TCA 262931761 ENCODE Processing Pipeline a9ff2fe93045422437517a44fe209f2d https://www.encodeproject.org/files/ENCFF965ISU/@@download/ENCFF965ISU.bam GRCh38 released inconsistent platforms, mild to moderate bottlenecking, low read length missing raw data in replicate poor library complexity, insufficient read depth, severe bottlenecking ENCFF000YZZ bam alignments ENCSR000EHK ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 2 ENCFF000ZAE 528908013 Michael Snyder, Stanford 4d39d6b306af04446ac8b12d86f507a4 https://www.encodeproject.org/files/ENCFF000YZZ/@@download/ENCFF000YZZ.bam hg19 archived mixed read lengths biological replicates with identical biosample insufficient replicate concordance, insufficient read length, control insufficient read depth, insufficient read depth ENCFF000ZAA bigBed narrowPeak peaks ENCSR000EHK ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE ENCFF001VOV 110607 Michael Snyder, Stanford 72a10edbf8db3230bb13bd9ac2554451 https://www.encodeproject.org/files/ENCFF000ZAA/@@download/ENCFF000ZAA.bigBed hg19 archived mixed read lengths biological replicates with identical biosample insufficient replicate concordance, insufficient read length, control insufficient read depth, insufficient read depth ENCFF000ZAB bigWig signal ENCSR000EHK ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 378385170 Michael Snyder, Stanford 608149caacd54612e3ca37de2815a904 https://www.encodeproject.org/files/ENCFF000ZAB/@@download/ENCFF000ZAB.bigWig hg19 archived mixed read lengths biological replicates with identical biosample, missing derived_from insufficient replicate concordance, insufficient read length, control insufficient read depth, insufficient read depth ENCFF000ZAC bam alignments ENCSR000EHK ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 1 ENCFF000ZBF 892770386 Michael Snyder, Stanford 6a7a3c395e5132650b84309049a4a46f https://www.encodeproject.org/files/ENCFF000ZAC/@@download/ENCFF000ZAC.bam hg19 archived mixed read lengths biological replicates with identical biosample insufficient replicate concordance, insufficient read length, control insufficient read depth, insufficient read depth ENCFF000ZAE fastq reads ENCSR000EHK ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 2 1 34 single-ended 405154742 Michael Snyder, Stanford 8cba2bd17f648ba1eaa537849ad8a372 https://www.encodeproject.org/files/ENCFF000ZAE/@@download/ENCFF000ZAE.fastq.gz Illumina Genome Analyzer /files/ENCFF000YPM/ released mixed read lengths biological replicates with identical biosample insufficient replicate concordance, insufficient read length, control insufficient read depth, insufficient read depth ENCFF000ZBF fastq reads ENCSR000EHK ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 1 1 27 single-ended 660534001 Michael Snyder, Stanford 2130ef12b2ebb03f72e6d188327fc2f3 https://www.encodeproject.org/files/ENCFF000ZBF/@@download/ENCFF000ZBF.fastq.gz Illumina Genome Analyzer /files/ENCFF000YPM/ released mixed read lengths, inconsistent control read length biological replicates with identical biosample insufficient replicate concordance, insufficient read length, control insufficient read depth, insufficient read depth ENCFF001VOV bed narrowPeak peaks ENCSR000EHK ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 22633 Michael Snyder, Stanford 486e77ed088efb5ef805a0510c9b024b https://www.encodeproject.org/files/ENCFF001VOV/@@download/ENCFF001VOV.bed.gz hg19 archived mixed read lengths biological replicates with identical biosample, missing derived_from insufficient replicate concordance, insufficient read length, control insufficient read depth, insufficient read depth ENCFF002CYD bed narrowPeak optimal idr thresholded peaks ENCSR000EHK ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 54441 ENCODE Consortium Analysis Working Group e8bdf374770a425d884ec74e902338b6 https://www.encodeproject.org/files/ENCFF002CYD/@@download/ENCFF002CYD.bed.gz hg19 archived mixed read lengths biological replicates with identical biosample, missing derived_from insufficient replicate concordance, insufficient read length, control insufficient read depth, insufficient read depth ENCFF243MMB bigBed narrowPeak optimal idr thresholded peaks ENCSR000EHK ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE ENCFF002CYD 190306 ENCODE Consortium ddc95d6db2dcaea55734cf27a0191a80 https://www.encodeproject.org/files/ENCFF243MMB/@@download/ENCFF243MMB.bigBed hg19 archived mixed read lengths biological replicates with identical biosample insufficient replicate concordance, insufficient read length, control insufficient read depth, insufficient read depth ENCFF740GXI bam unfiltered alignments ENCSR000EHK ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 2 27 ENCFF000ZAE, ENCFF643CGH 481979484 ENCODE Processing Pipeline e413be357ff30ccdee4254f5f12d53c9 https://www.encodeproject.org/files/ENCFF740GXI/@@download/ENCFF740GXI.bam GRCh38 released mixed read lengths biological replicates with identical biosample insufficient replicate concordance, insufficient read length, control insufficient read depth, insufficient read depth ENCFF339BJP bam alignments ENCSR000EHK ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 1 27 ENCFF000ZBF, ENCFF643CGH 431688113 ENCODE Processing Pipeline 8c3522f018db0fb6e60d6cdf0c37fe83 https://www.encodeproject.org/files/ENCFF339BJP/@@download/ENCFF339BJP.bam GRCh38 released mixed read lengths biological replicates with identical biosample insufficient replicate concordance, insufficient read length, control insufficient read depth, insufficient read depth ENCFF263NHR bam unfiltered alignments ENCSR000EHK ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 1 27 ENCFF000ZBF, ENCFF643CGH 896534635 ENCODE Processing Pipeline 2b538fe2d7a4c10aed6696224a968311 https://www.encodeproject.org/files/ENCFF263NHR/@@download/ENCFF263NHR.bam GRCh38 released mixed read lengths biological replicates with identical biosample insufficient replicate concordance, insufficient read length, control insufficient read depth, insufficient read depth ENCFF470IST bam alignments ENCSR000EHK ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 2 27 ENCFF000ZAE, ENCFF643CGH 230399007 ENCODE Processing Pipeline cd320a6feca82a0cf28344bcfd729961 https://www.encodeproject.org/files/ENCFF470IST/@@download/ENCFF470IST.bam GRCh38 released mixed read lengths biological replicates with identical biosample insufficient replicate concordance, insufficient read length, control insufficient read depth, insufficient read depth ENCFF763YXP bed narrowPeak peaks ENCSR000EHK ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 2 ENCFF287WTN, ENCFF440UUU 2052776 ENCODE Processing Pipeline 291f711da6540d9f17763904a9aa0e40 https://www.encodeproject.org/files/ENCFF763YXP/@@download/ENCFF763YXP.bed.gz hg19 released mixed read lengths biological replicates with identical biosample insufficient replicate concordance, insufficient read length, control insufficient read depth, insufficient read depth ENCFF956SIV bed narrowPeak peaks ENCSR000EHK ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF287WTN, ENCFF440UUU, ENCFF739PBB 158227 ENCODE Processing Pipeline ecad71f4993868d696e98ca101678310 https://www.encodeproject.org/files/ENCFF956SIV/@@download/ENCFF956SIV.bed.gz hg19 released mixed read lengths biological replicates with identical biosample insufficient replicate concordance, insufficient read length, control insufficient read depth, insufficient read depth ENCFF798HQZ bigBed narrowPeak peaks ENCSR000EHK ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF956SIV 372599 ENCODE Processing Pipeline 99fbd784b500319e387441ad103562a1 https://www.encodeproject.org/files/ENCFF798HQZ/@@download/ENCFF798HQZ.bigBed hg19 released mixed read lengths biological replicates with identical biosample insufficient replicate concordance, insufficient read length, control insufficient read depth, insufficient read depth ENCFF440UUU bam alignments ENCSR000EHK ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 2 27 ENCFF000ZAE, ENCFF807MUK 230804748 ENCODE Processing Pipeline 327fd90faaf2fa1e4ea961736552682b https://www.encodeproject.org/files/ENCFF440UUU/@@download/ENCFF440UUU.bam hg19 released mixed read lengths biological replicates with identical biosample insufficient replicate concordance, insufficient read length, control insufficient read depth, insufficient read depth ENCFF283ZLI bigWig fold change over control ENCSR000EHK ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF287WTN, ENCFF440UUU, ENCFF739PBB 255471968 ENCODE Processing Pipeline f47efded3c590cb8f68e0ed520d3f336 https://www.encodeproject.org/files/ENCFF283ZLI/@@download/ENCFF283ZLI.bigWig hg19 released mixed read lengths biological replicates with identical biosample insufficient replicate concordance, insufficient read length, control insufficient read depth, insufficient read depth ENCFF077EAD bed narrowPeak conservative idr thresholded peaks ENCSR000EHK ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF001TDO, ENCFF585NXD, ENCFF763YXP, ENCFF956SIV 8866 ENCODE Processing Pipeline 74daa78d138749f85d51db3d7ef6001d https://www.encodeproject.org/files/ENCFF077EAD/@@download/ENCFF077EAD.bed.gz hg19 released mixed read lengths biological replicates with identical biosample insufficient replicate concordance, insufficient read length, control insufficient read depth, insufficient read depth ENCFF498DOQ bed narrowPeak optimal idr thresholded peaks ENCSR000EHK ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF001TDO, ENCFF585NXD, ENCFF763YXP, ENCFF956SIV 18040 ENCODE Processing Pipeline cabac0bdd4bc42dfea03b1f763d569c8 https://www.encodeproject.org/files/ENCFF498DOQ/@@download/ENCFF498DOQ.bed.gz hg19 released mixed read lengths biological replicates with identical biosample insufficient replicate concordance, insufficient read length, control insufficient read depth, insufficient read depth ENCFF891MMK bigWig signal p-value ENCSR000EHK ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 1 ENCFF287WTN, ENCFF739PBB 209458763 ENCODE Processing Pipeline 9b82c9dce631d0163e6eb8b00e31cc1e https://www.encodeproject.org/files/ENCFF891MMK/@@download/ENCFF891MMK.bigWig hg19 released mixed read lengths biological replicates with identical biosample insufficient replicate concordance, insufficient read length, control insufficient read depth, insufficient read depth ENCFF756YPW bigWig signal p-value ENCSR000EHK ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF287WTN, ENCFF440UUU, ENCFF739PBB 234491285 ENCODE Processing Pipeline d4270ae5e475abfad6e2090e4c1c21d9 https://www.encodeproject.org/files/ENCFF756YPW/@@download/ENCFF756YPW.bigWig hg19 released mixed read lengths biological replicates with identical biosample insufficient replicate concordance, insufficient read length, control insufficient read depth, insufficient read depth ENCFF739PBB bam alignments ENCSR000EHK ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 1 27 ENCFF000ZBF, ENCFF807MUK 432250264 ENCODE Processing Pipeline 5b1dd87b60f08b419f06ae044dd34661 https://www.encodeproject.org/files/ENCFF739PBB/@@download/ENCFF739PBB.bam hg19 released mixed read lengths biological replicates with identical biosample insufficient replicate concordance, insufficient read length, control insufficient read depth, insufficient read depth ENCFF907SUB bam unfiltered alignments ENCSR000EHK ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 2 27 ENCFF000ZAE, ENCFF807MUK 480519815 ENCODE Processing Pipeline ade570ae56ec26699753419914571bec https://www.encodeproject.org/files/ENCFF907SUB/@@download/ENCFF907SUB.bam hg19 released mixed read lengths biological replicates with identical biosample insufficient replicate concordance, insufficient read length, control insufficient read depth, insufficient read depth ENCFF088UXO bam unfiltered alignments ENCSR000EHK ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 1 27 ENCFF000ZBF, ENCFF807MUK 893679766 ENCODE Processing Pipeline 94b88861a808d2cda9ecee698d58471b https://www.encodeproject.org/files/ENCFF088UXO/@@download/ENCFF088UXO.bam hg19 released mixed read lengths biological replicates with identical biosample insufficient replicate concordance, insufficient read length, control insufficient read depth, insufficient read depth ENCFF529JVA bigWig signal p-value ENCSR000EHK ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 2 ENCFF287WTN, ENCFF440UUU 225226695 ENCODE Processing Pipeline 4fdbdfcc31bcc12cc17dddecd8a935d5 https://www.encodeproject.org/files/ENCFF529JVA/@@download/ENCFF529JVA.bigWig hg19 released mixed read lengths biological replicates with identical biosample insufficient replicate concordance, insufficient read length, control insufficient read depth, insufficient read depth ENCFF141KTV bigBed narrowPeak optimal idr thresholded peaks ENCSR000EHK ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF498DOQ 74401 ENCODE Processing Pipeline a32852e642621f74d24753a82918c379 https://www.encodeproject.org/files/ENCFF141KTV/@@download/ENCFF141KTV.bigBed hg19 released mixed read lengths biological replicates with identical biosample insufficient replicate concordance, insufficient read length, control insufficient read depth, insufficient read depth ENCFF160NUJ bigWig fold change over control ENCSR000EHK ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 2 ENCFF287WTN, ENCFF440UUU 98494998 ENCODE Processing Pipeline 74a330b564c84697d5501b2297e66a95 https://www.encodeproject.org/files/ENCFF160NUJ/@@download/ENCFF160NUJ.bigWig hg19 released mixed read lengths biological replicates with identical biosample insufficient replicate concordance, insufficient read length, control insufficient read depth, insufficient read depth ENCFF187TJW bigBed narrowPeak peaks ENCSR000EHK ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 2 ENCFF763YXP 5225330 ENCODE Processing Pipeline 50ff479538a52c07344595e86de22279 https://www.encodeproject.org/files/ENCFF187TJW/@@download/ENCFF187TJW.bigBed hg19 released mixed read lengths biological replicates with identical biosample insufficient replicate concordance, insufficient read length, control insufficient read depth, insufficient read depth ENCFF294GPS bigBed narrowPeak conservative idr thresholded peaks ENCSR000EHK ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF077EAD 60256 ENCODE Processing Pipeline 9b36ed60dce143262ab27869261eeb25 https://www.encodeproject.org/files/ENCFF294GPS/@@download/ENCFF294GPS.bigBed hg19 released mixed read lengths biological replicates with identical biosample insufficient replicate concordance, insufficient read length, control insufficient read depth, insufficient read depth ENCFF912ZSZ bigWig fold change over control ENCSR000EHK ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 1 ENCFF287WTN, ENCFF739PBB 168713382 ENCODE Processing Pipeline 483c48aed662738745fc88bb691c1958 https://www.encodeproject.org/files/ENCFF912ZSZ/@@download/ENCFF912ZSZ.bigWig hg19 released mixed read lengths biological replicates with identical biosample insufficient replicate concordance, insufficient read length, control insufficient read depth, insufficient read depth ENCFF585NXD bed narrowPeak peaks ENCSR000EHK ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 1 ENCFF287WTN, ENCFF739PBB 2492541 ENCODE Processing Pipeline fa09b91df9b9e0ad5cd4892b4d9449f9 https://www.encodeproject.org/files/ENCFF585NXD/@@download/ENCFF585NXD.bed.gz hg19 released mixed read lengths biological replicates with identical biosample insufficient replicate concordance, insufficient read length, control insufficient read depth, insufficient read depth ENCFF357NED bigBed narrowPeak peaks ENCSR000EHK ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 1 ENCFF585NXD 5103682 ENCODE Processing Pipeline c300d96288aafdc48336ca2a7d1eccc0 https://www.encodeproject.org/files/ENCFF357NED/@@download/ENCFF357NED.bigBed hg19 released mixed read lengths biological replicates with identical biosample insufficient replicate concordance, insufficient read length, control insufficient read depth, insufficient read depth ENCFF000PWT bam alignments ENCSR000BRQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CEBPB-human ENCAB000AFB DNA see document see document False 2012-02-29 ENCODE 1 ENCFF000PXH 1612276012 Richard Myers, HAIB c9f52394542ddd0ae83f7185a73cc7e4 https://www.encodeproject.org/files/ENCFF000PWT/@@download/ENCFF000PWT.bam hg19 archived borderline replicate concordance, inconsistent platforms, low read length biological replicates with identical biosample extremely low read depth ENCFF000PWU bam alignments ENCSR000BRQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CEBPB-human ENCAB000AFB DNA see document see document False 2012-02-29 ENCODE 2 ENCFF000PXC 301319550 Richard Myers, HAIB 0eed3f5bb8e39d3488eef203473a4c1d https://www.encodeproject.org/files/ENCFF000PWU/@@download/ENCFF000PWU.bam hg19 archived borderline replicate concordance, inconsistent platforms, low read length biological replicates with identical biosample extremely low read depth ENCFF000PWV bigBed broadPeak peaks ENCSR000BRQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CEBPB-human ENCAB000AFB DNA see document see document False 2012-02-29 ENCODE 1 1 ENCFF001UJE 723672 Richard Myers, HAIB 286005c229c7d033b961d899ad18e93a https://www.encodeproject.org/files/ENCFF000PWV/@@download/ENCFF000PWV.bigBed hg19 archived borderline replicate concordance, inconsistent platforms, low read length biological replicates with identical biosample extremely low read depth ENCFF000PWW bigBed broadPeak peaks ENCSR000BRQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CEBPB-human ENCAB000AFB DNA see document see document False 2012-02-29 ENCODE 2 1 ENCFF001UJF 351814 Richard Myers, HAIB edc1d22469d19388980b0b8a2f218479 https://www.encodeproject.org/files/ENCFF000PWW/@@download/ENCFF000PWW.bigBed hg19 archived borderline replicate concordance, inconsistent platforms, low read length biological replicates with identical biosample extremely low read depth ENCFF000PWY bigWig raw signal ENCSR000BRQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CEBPB-human ENCAB000AFB DNA see document see document False 2012-02-29 ENCODE 1 1 35347402 Richard Myers, HAIB 2529b565e11b4dabf8b085b44ca0ddd6 https://www.encodeproject.org/files/ENCFF000PWY/@@download/ENCFF000PWY.bigWig hg19 archived borderline replicate concordance, inconsistent platforms, low read length biological replicates with identical biosample, missing derived_from extremely low read depth ENCFF000PWZ bigWig raw signal ENCSR000BRQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CEBPB-human ENCAB000AFB DNA see document see document False 2012-02-29 ENCODE 2 1 4044294 Richard Myers, HAIB b786f75cc8e1ce70aca6b93db938c625 https://www.encodeproject.org/files/ENCFF000PWZ/@@download/ENCFF000PWZ.bigWig hg19 archived borderline replicate concordance, inconsistent platforms, low read length biological replicates with identical biosample, missing derived_from extremely low read depth ENCFF000PXC fastq reads ENCSR000BRQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CEBPB-human ENCAB000AFB DNA see document see document False 2012-02-29 ENCODE 2 1 36 single-ended 284966874 Richard Myers, HAIB bebfabcd8b5984935c98ffa4edc7dbd8 https://www.encodeproject.org/files/ENCFF000PXC/@@download/ENCFF000PXC.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000QFG/ released borderline replicate concordance, inconsistent platforms, low read length biological replicates with identical biosample extremely low read depth ENCFF000PXH fastq reads ENCSR000BRQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CEBPB-human ENCAB000AFB DNA see document see document False 2012-02-29 ENCODE 1 1 36 single-ended 1561986353 Richard Myers, HAIB ca3051e8325dc634495033955db7cf1a https://www.encodeproject.org/files/ENCFF000PXH/@@download/ENCFF000PXH.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000QFG/ released borderline replicate concordance, inconsistent platforms, low read length biological replicates with identical biosample extremely low read depth ENCFF001UJE bed broadPeak peaks ENCSR000BRQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CEBPB-human ENCAB000AFB DNA see document see document False 2012-02-29 ENCODE 1 1 451843 Richard Myers, HAIB e7dceda33860c95b624e20d4dd2ef1a2 https://www.encodeproject.org/files/ENCFF001UJE/@@download/ENCFF001UJE.bed.gz hg19 archived borderline replicate concordance, inconsistent platforms, low read length biological replicates with identical biosample, missing derived_from extremely low read depth ENCFF001UJF bed broadPeak peaks ENCSR000BRQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CEBPB-human ENCAB000AFB DNA see document see document False 2012-02-29 ENCODE 2 1 203262 Richard Myers, HAIB a079e6273be430fa84aebff44799dd3e https://www.encodeproject.org/files/ENCFF001UJF/@@download/ENCFF001UJF.bed.gz hg19 archived borderline replicate concordance, inconsistent platforms, low read length biological replicates with identical biosample, missing derived_from extremely low read depth ENCFF002CLR bed narrowPeak optimal idr thresholded peaks ENCSR000BRQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CEBPB-human ENCAB000AFB DNA see document see document False 2012-02-29 ENCODE 435226 ENCODE Consortium Analysis Working Group 2d10e26f9b61edce33b6059246986ef0 https://www.encodeproject.org/files/ENCFF002CLR/@@download/ENCFF002CLR.bed.gz hg19 archived borderline replicate concordance, inconsistent platforms, low read length biological replicates with identical biosample, missing derived_from extremely low read depth ENCFF987DFQ bigBed narrowPeak optimal idr thresholded peaks ENCSR000BRQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CEBPB-human ENCAB000AFB DNA see document see document False 2012-02-29 ENCODE ENCFF002CLR 938772 ENCODE Consortium 3c855a1f08c583e7b306dad5bb05e670 https://www.encodeproject.org/files/ENCFF987DFQ/@@download/ENCFF987DFQ.bigBed hg19 archived borderline replicate concordance, inconsistent platforms, low read length biological replicates with identical biosample extremely low read depth ENCFF873KUV bam unfiltered alignments ENCSR000BRQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CEBPB-human ENCAB000AFB DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000PXC, ENCFF643CGH 324925942 ENCODE Processing Pipeline 08039c09a1635fe7fb979e9ca2c714c3 https://www.encodeproject.org/files/ENCFF873KUV/@@download/ENCFF873KUV.bam GRCh38 released borderline replicate concordance, inconsistent platforms, low read length biological replicates with identical biosample extremely low read depth ENCFF154YTN bam alignments ENCSR000BRQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CEBPB-human ENCAB000AFB DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000PXC, ENCFF643CGH 220620394 ENCODE Processing Pipeline 0344302f82a6752f7ca2a29be717f27b https://www.encodeproject.org/files/ENCFF154YTN/@@download/ENCFF154YTN.bam GRCh38 released borderline replicate concordance, inconsistent platforms, low read length biological replicates with identical biosample extremely low read depth ENCFF706JAK bam unfiltered alignments ENCSR000BRQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CEBPB-human ENCAB000AFB DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000PXH, ENCFF643CGH 1730829935 ENCODE Processing Pipeline 88d609c3a95eff66acb143ccee2d0d70 https://www.encodeproject.org/files/ENCFF706JAK/@@download/ENCFF706JAK.bam GRCh38 released borderline replicate concordance, inconsistent platforms, low read length biological replicates with identical biosample extremely low read depth ENCFF314OQP bam alignments ENCSR000BRQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CEBPB-human ENCAB000AFB DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000PXH, ENCFF643CGH 1108796762 ENCODE Processing Pipeline 9eb519249d6b885945bf1feca2aef1fa https://www.encodeproject.org/files/ENCFF314OQP/@@download/ENCFF314OQP.bam GRCh38 released borderline replicate concordance, inconsistent platforms, low read length biological replicates with identical biosample extremely low read depth ENCFF897GTJ bam unfiltered alignments ENCSR000BRQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CEBPB-human ENCAB000AFB DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000PXC, ENCFF807MUK 324323726 ENCODE Processing Pipeline abd57d78babcc1cb771b23a700aec079 https://www.encodeproject.org/files/ENCFF897GTJ/@@download/ENCFF897GTJ.bam hg19 released borderline replicate concordance, inconsistent platforms, low read length biological replicates with identical biosample extremely low read depth ENCFF505XKZ bam alignments ENCSR000BRQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CEBPB-human ENCAB000AFB DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000PXC, ENCFF807MUK 220770334 ENCODE Processing Pipeline 6185b9a7afaedfa5f20e9f161b0809ef https://www.encodeproject.org/files/ENCFF505XKZ/@@download/ENCFF505XKZ.bam hg19 released borderline replicate concordance, inconsistent platforms, low read length biological replicates with identical biosample extremely low read depth ENCFF357EBD bam unfiltered alignments ENCSR000BRQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CEBPB-human ENCAB000AFB DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000PXH, ENCFF807MUK 1727732332 ENCODE Processing Pipeline 318200b999108f8ea98c3b4c0c624009 https://www.encodeproject.org/files/ENCFF357EBD/@@download/ENCFF357EBD.bam hg19 released borderline replicate concordance, inconsistent platforms, low read length biological replicates with identical biosample extremely low read depth ENCFF935XJG bam alignments ENCSR000BRQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CEBPB-human ENCAB000AFB DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000PXH, ENCFF807MUK 1109295957 ENCODE Processing Pipeline 4e38b397b203f92e5aa0ce576f1fbeb4 https://www.encodeproject.org/files/ENCFF935XJG/@@download/ENCFF935XJG.bam hg19 released borderline replicate concordance, inconsistent platforms, low read length biological replicates with identical biosample extremely low read depth ENCFF943LAJ bigWig fold change over control ENCSR000BRQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CEBPB-human ENCAB000AFB DNA see document see document False 2012-02-29 ENCODE 1 ENCFF314OQP, ENCFF836OEO 601210277 ENCODE Processing Pipeline c5589a0c556f0007081643523a254666 https://www.encodeproject.org/files/ENCFF943LAJ/@@download/ENCFF943LAJ.bigWig GRCh38 released borderline replicate concordance, inconsistent platforms, low read length biological replicates with identical biosample extremely low read depth ENCFF925BLR bigWig signal p-value ENCSR000BRQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CEBPB-human ENCAB000AFB DNA see document see document False 2012-02-29 ENCODE 2 ENCFF154YTN, ENCFF836OEO 448718671 ENCODE Processing Pipeline 488864bdd33b8df8073b2832db8a6ff5 https://www.encodeproject.org/files/ENCFF925BLR/@@download/ENCFF925BLR.bigWig GRCh38 released borderline replicate concordance, inconsistent platforms, low read length biological replicates with identical biosample extremely low read depth ENCFF814AET bigWig signal p-value ENCSR000BRQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CEBPB-human ENCAB000AFB DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF154YTN, ENCFF314OQP, ENCFF836OEO 674000950 ENCODE Processing Pipeline 6924791c9ff3c937389f21ec1bbc91ba https://www.encodeproject.org/files/ENCFF814AET/@@download/ENCFF814AET.bigWig GRCh38 released borderline replicate concordance, inconsistent platforms, low read length biological replicates with identical biosample extremely low read depth ENCFF956YUO bigWig signal p-value ENCSR000BRQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CEBPB-human ENCAB000AFB DNA see document see document False 2012-02-29 ENCODE 1 ENCFF314OQP, ENCFF836OEO 670737899 ENCODE Processing Pipeline 6acd262b4c8eea5498a2b95de85701ca https://www.encodeproject.org/files/ENCFF956YUO/@@download/ENCFF956YUO.bigWig GRCh38 released borderline replicate concordance, inconsistent platforms, low read length biological replicates with identical biosample extremely low read depth ENCFF038ECN bigWig fold change over control ENCSR000BRQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CEBPB-human ENCAB000AFB DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF154YTN, ENCFF314OQP, ENCFF836OEO 669994536 ENCODE Processing Pipeline 2e99657a1f159ce3f32c04cd371ae135 https://www.encodeproject.org/files/ENCFF038ECN/@@download/ENCFF038ECN.bigWig GRCh38 released borderline replicate concordance, inconsistent platforms, low read length biological replicates with identical biosample extremely low read depth ENCFF512WXR bigBed narrowPeak optimal idr thresholded peaks ENCSR000BRQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CEBPB-human ENCAB000AFB DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF813LOW 744066 ENCODE Processing Pipeline 8b4a7d8ed849f8770b1da12a96a5c108 https://www.encodeproject.org/files/ENCFF512WXR/@@download/ENCFF512WXR.bigBed GRCh38 released borderline replicate concordance, inconsistent platforms, low read length biological replicates with identical biosample extremely low read depth ENCFF382AWH bigWig fold change over control ENCSR000BRQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CEBPB-human ENCAB000AFB DNA see document see document False 2012-02-29 ENCODE 2 ENCFF154YTN, ENCFF836OEO 155138257 ENCODE Processing Pipeline c52d669a584697bb2c5365c38b0ecd0a https://www.encodeproject.org/files/ENCFF382AWH/@@download/ENCFF382AWH.bigWig GRCh38 released borderline replicate concordance, inconsistent platforms, low read length biological replicates with identical biosample extremely low read depth ENCFF239OYD bigBed narrowPeak peaks ENCSR000BRQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CEBPB-human ENCAB000AFB DNA see document see document False 2012-02-29 ENCODE 1 ENCFF220UJA 13287065 ENCODE Processing Pipeline 0ed9d8cffbf657f72f6159902b2a8aaa https://www.encodeproject.org/files/ENCFF239OYD/@@download/ENCFF239OYD.bigBed GRCh38 released borderline replicate concordance, inconsistent platforms, low read length biological replicates with identical biosample extremely low read depth ENCFF765ZVU bigBed narrowPeak peaks ENCSR000BRQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CEBPB-human ENCAB000AFB DNA see document see document False 2012-02-29 ENCODE 2 ENCFF258YCI 3718780 ENCODE Processing Pipeline 297277b2e822bcd7b1823b2433ee02d5 https://www.encodeproject.org/files/ENCFF765ZVU/@@download/ENCFF765ZVU.bigBed GRCh38 released borderline replicate concordance, inconsistent platforms, low read length biological replicates with identical biosample extremely low read depth ENCFF708PBZ bigBed narrowPeak peaks ENCSR000BRQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CEBPB-human ENCAB000AFB DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF891QTR 13383361 ENCODE Processing Pipeline b31787ad794a3d72487abb3da8887f2b https://www.encodeproject.org/files/ENCFF708PBZ/@@download/ENCFF708PBZ.bigBed GRCh38 released borderline replicate concordance, inconsistent platforms, low read length biological replicates with identical biosample extremely low read depth ENCFF712GEQ bed narrowPeak conservative idr thresholded peaks ENCSR000BRQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CEBPB-human ENCAB000AFB DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF220UJA, ENCFF258YCI, ENCFF419RSJ, ENCFF891QTR 255544 ENCODE Processing Pipeline d204ffcab93fcab5a58daf5ebacfaf70 https://www.encodeproject.org/files/ENCFF712GEQ/@@download/ENCFF712GEQ.bed.gz GRCh38 released borderline replicate concordance, inconsistent platforms, low read length biological replicates with identical biosample extremely low read depth ENCFF220UJA bed narrowPeak peaks ENCSR000BRQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CEBPB-human ENCAB000AFB DNA see document see document False 2012-02-29 ENCODE 1 ENCFF314OQP, ENCFF836OEO 6077612 ENCODE Processing Pipeline e8b679ead2b7957fcd533951f297e073 https://www.encodeproject.org/files/ENCFF220UJA/@@download/ENCFF220UJA.bed.gz GRCh38 released borderline replicate concordance, inconsistent platforms, low read length biological replicates with identical biosample extremely low read depth ENCFF891QTR bed narrowPeak peaks ENCSR000BRQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CEBPB-human ENCAB000AFB DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF154YTN, ENCFF314OQP, ENCFF836OEO 6235739 ENCODE Processing Pipeline 27212a268b47e11e2cf376ecb5f0b471 https://www.encodeproject.org/files/ENCFF891QTR/@@download/ENCFF891QTR.bed.gz GRCh38 released borderline replicate concordance, inconsistent platforms, low read length biological replicates with identical biosample extremely low read depth ENCFF258YCI bed narrowPeak peaks ENCSR000BRQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CEBPB-human ENCAB000AFB DNA see document see document False 2012-02-29 ENCODE 2 ENCFF154YTN, ENCFF836OEO 1811778 ENCODE Processing Pipeline 681fe5f239a1ff29b4023defd9d37409 https://www.encodeproject.org/files/ENCFF258YCI/@@download/ENCFF258YCI.bed.gz GRCh38 released borderline replicate concordance, inconsistent platforms, low read length biological replicates with identical biosample extremely low read depth ENCFF179TKE bigBed narrowPeak conservative idr thresholded peaks ENCSR000BRQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CEBPB-human ENCAB000AFB DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF712GEQ 529574 ENCODE Processing Pipeline aa71a45c7885c7d6e3dc0867815fc3bd https://www.encodeproject.org/files/ENCFF179TKE/@@download/ENCFF179TKE.bigBed GRCh38 released borderline replicate concordance, inconsistent platforms, low read length biological replicates with identical biosample extremely low read depth ENCFF813LOW bed narrowPeak optimal idr thresholded peaks ENCSR000BRQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CEBPB-human ENCAB000AFB DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF220UJA, ENCFF258YCI, ENCFF419RSJ, ENCFF891QTR 415368 ENCODE Processing Pipeline 8163db7fab7a18aae4396d2cc750b4c1 https://www.encodeproject.org/files/ENCFF813LOW/@@download/ENCFF813LOW.bed.gz GRCh38 released borderline replicate concordance, inconsistent platforms, low read length biological replicates with identical biosample extremely low read depth ENCFF000YYX bam alignments ENCSR000EWI ChIP-seq EFO:0002067 K562 cell line Homo sapiens SETDB1-human ENCAB000AKP DNA see document see document False 2011-10-29 ENCODE 1 ENCFF000YZH 1430325055 Peggy Farnham, USC 68ce8200ab5d57def7fbe800648d5970 https://www.encodeproject.org/files/ENCFF000YYX/@@download/ENCFF000YYX.bam hg19 archived biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF000YYY bam alignments ENCSR000EWI ChIP-seq EFO:0002067 K562 cell line Homo sapiens SETDB1-human ENCAB000AKP DNA see document see document False 2011-10-29 ENCODE 2 ENCFF000YZJ 815564599 Peggy Farnham, USC deaa992468195b8ac836a78c12adf363 https://www.encodeproject.org/files/ENCFF000YYY/@@download/ENCFF000YYY.bam hg19 archived biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF000YYZ bigBed narrowPeak peaks ENCSR000EWI ChIP-seq EFO:0002067 K562 cell line Homo sapiens SETDB1-human ENCAB000AKP DNA see document see document False 2011-10-29 ENCODE ENCFF001VOQ 214083 Peggy Farnham, USC 978bdc04fab12c319b081f74c45186c4 https://www.encodeproject.org/files/ENCFF000YYZ/@@download/ENCFF000YYZ.bigBed hg19 archived biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF000YZA bigWig signal ENCSR000EWI ChIP-seq EFO:0002067 K562 cell line Homo sapiens SETDB1-human ENCAB000AKP DNA see document see document False 2011-10-29 ENCODE 337256050 Peggy Farnham, USC 61ad54a0eb0844822cef5e416848d24e https://www.encodeproject.org/files/ENCFF000YZA/@@download/ENCFF000YZA.bigWig hg19 archived biological replicates with identical biosample, missing derived_from insufficient read length, insufficient read depth ENCFF000YZH fastq reads ENCSR000EWI ChIP-seq EFO:0002067 K562 cell line Homo sapiens SETDB1-human ENCAB000AKP DNA see document see document False 2011-10-29 ENCODE 1 1 32 single-ended 1249353960 Peggy Farnham, USC dadbed28aa7fcf1e4896344fa4e2b6f8 https://www.encodeproject.org/files/ENCFF000YZH/@@download/ENCFF000YZH.fastq.gz Illumina Genome Analyzer /files/ENCFF000VEK/ released inconsistent control read length biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF000YZJ fastq reads ENCSR000EWI ChIP-seq EFO:0002067 K562 cell line Homo sapiens SETDB1-human ENCAB000AKP DNA see document see document False 2011-10-29 ENCODE 2 1 32 single-ended 686668626 Peggy Farnham, USC 738a51681d76ac941299c275fcfc91a7 https://www.encodeproject.org/files/ENCFF000YZJ/@@download/ENCFF000YZJ.fastq.gz Illumina Genome Analyzer /files/ENCFF000VEK/ released inconsistent control read length biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF001VOQ bed narrowPeak peaks ENCSR000EWI ChIP-seq EFO:0002067 K562 cell line Homo sapiens SETDB1-human ENCAB000AKP DNA see document see document False 2011-10-29 ENCODE 59113 Peggy Farnham, USC 53b97f9d370e39582467b6d40f7512e7 https://www.encodeproject.org/files/ENCFF001VOQ/@@download/ENCFF001VOQ.bed.gz hg19 archived biological replicates with identical biosample, missing derived_from insufficient read length, insufficient read depth ENCFF002CXY bed narrowPeak optimal idr thresholded peaks ENCSR000EWI ChIP-seq EFO:0002067 K562 cell line Homo sapiens SETDB1-human ENCAB000AKP DNA see document see document False 2011-10-29 ENCODE 89035 ENCODE Consortium Analysis Working Group 75566ac70f8c0b67ab237afdd882c571 https://www.encodeproject.org/files/ENCFF002CXY/@@download/ENCFF002CXY.bed.gz hg19 archived biological replicates with identical biosample, missing derived_from insufficient read length, insufficient read depth ENCFF485AKH bigBed narrowPeak optimal idr thresholded peaks ENCSR000EWI ChIP-seq EFO:0002067 K562 cell line Homo sapiens SETDB1-human ENCAB000AKP DNA see document see document False 2011-10-29 ENCODE ENCFF002CXY 259935 ENCODE Consortium 94775d645d7266b4f0a4770811f9b9dc https://www.encodeproject.org/files/ENCFF485AKH/@@download/ENCFF485AKH.bigBed hg19 archived biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF728IYF bam alignments ENCSR000EWI ChIP-seq EFO:0002067 K562 cell line Homo sapiens SETDB1-human ENCAB000AKP DNA see document see document False 2011-10-29 ENCODE 1 32 ENCFF000YZH, ENCFF643CGH 413270623 ENCODE Processing Pipeline f504360768fc757cce7d062bd631cc71 https://www.encodeproject.org/files/ENCFF728IYF/@@download/ENCFF728IYF.bam GRCh38 released biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF422PHA bigWig fold change over control ENCSR000EWI ChIP-seq EFO:0002067 K562 cell line Homo sapiens SETDB1-human ENCAB000AKP DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF355SGP, ENCFF728IYF, ENCFF874YYW 352602789 ENCODE Processing Pipeline f3c04344187489a7f6c98a961d005828 https://www.encodeproject.org/files/ENCFF422PHA/@@download/ENCFF422PHA.bigWig GRCh38 released biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF437SIB bigBed narrowPeak peaks ENCSR000EWI ChIP-seq EFO:0002067 K562 cell line Homo sapiens SETDB1-human ENCAB000AKP DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF611CFB 13081537 ENCODE Processing Pipeline de23e40d937d560a738e5cdf01b9393c https://www.encodeproject.org/files/ENCFF437SIB/@@download/ENCFF437SIB.bigBed GRCh38 released biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF690WNQ bed narrowPeak optimal idr thresholded peaks ENCSR000EWI ChIP-seq EFO:0002067 K562 cell line Homo sapiens SETDB1-human ENCAB000AKP DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF419RSJ, ENCFF540CBP, ENCFF611CFB, ENCFF613LAW 75317 ENCODE Processing Pipeline b4dbf7b0808315c0ca7fe2235b961f76 https://www.encodeproject.org/files/ENCFF690WNQ/@@download/ENCFF690WNQ.bed.gz GRCh38 released biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF567YZX bigBed narrowPeak conservative idr thresholded peaks ENCSR000EWI ChIP-seq EFO:0002067 K562 cell line Homo sapiens SETDB1-human ENCAB000AKP DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF910AUJ 177464 ENCODE Processing Pipeline 0bb0b15e78c8295b62a68cf48366af75 https://www.encodeproject.org/files/ENCFF567YZX/@@download/ENCFF567YZX.bigBed GRCh38 released biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF874YYW bam alignments ENCSR000EWI ChIP-seq EFO:0002067 K562 cell line Homo sapiens SETDB1-human ENCAB000AKP DNA see document see document False 2011-10-29 ENCODE 2 32 ENCFF000YZJ, ENCFF643CGH 272165124 ENCODE Processing Pipeline 6993a94656f7605bf97222083d85a80a https://www.encodeproject.org/files/ENCFF874YYW/@@download/ENCFF874YYW.bam GRCh38 released biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF129KLA bigWig signal p-value ENCSR000EWI ChIP-seq EFO:0002067 K562 cell line Homo sapiens SETDB1-human ENCAB000AKP DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF355SGP, ENCFF728IYF, ENCFF874YYW 432407874 ENCODE Processing Pipeline 201ef83b7e0fd5f84e657c892f1ccdea https://www.encodeproject.org/files/ENCFF129KLA/@@download/ENCFF129KLA.bigWig GRCh38 released biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF701DUO bam unfiltered alignments ENCSR000EWI ChIP-seq EFO:0002067 K562 cell line Homo sapiens SETDB1-human ENCAB000AKP DNA see document see document False 2011-10-29 ENCODE 1 32 ENCFF000YZH, ENCFF643CGH 1434423993 ENCODE Processing Pipeline 1781b80f6ef066362ba8cba7578714e4 https://www.encodeproject.org/files/ENCFF701DUO/@@download/ENCFF701DUO.bam GRCh38 released biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF282RIL bigWig signal p-value ENCSR000EWI ChIP-seq EFO:0002067 K562 cell line Homo sapiens SETDB1-human ENCAB000AKP DNA see document see document False 2011-10-29 ENCODE 2 ENCFF355SGP, ENCFF874YYW 376072399 ENCODE Processing Pipeline d39a2714729172048bc57e6b55618694 https://www.encodeproject.org/files/ENCFF282RIL/@@download/ENCFF282RIL.bigWig GRCh38 released biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF687QNU bigWig fold change over control ENCSR000EWI ChIP-seq EFO:0002067 K562 cell line Homo sapiens SETDB1-human ENCAB000AKP DNA see document see document False 2011-10-29 ENCODE 2 ENCFF355SGP, ENCFF874YYW 158502781 ENCODE Processing Pipeline a4e9b126c6396765537e3c5faff058a8 https://www.encodeproject.org/files/ENCFF687QNU/@@download/ENCFF687QNU.bigWig GRCh38 released biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF540CBP bed narrowPeak peaks ENCSR000EWI ChIP-seq EFO:0002067 K562 cell line Homo sapiens SETDB1-human ENCAB000AKP DNA see document see document False 2011-10-29 ENCODE 1 ENCFF355SGP, ENCFF728IYF 5248060 ENCODE Processing Pipeline ede423f58afd63d285ed5c1b8b464c01 https://www.encodeproject.org/files/ENCFF540CBP/@@download/ENCFF540CBP.bed.gz GRCh38 released biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF546XJX bigBed narrowPeak peaks ENCSR000EWI ChIP-seq EFO:0002067 K562 cell line Homo sapiens SETDB1-human ENCAB000AKP DNA see document see document False 2011-10-29 ENCODE 2 ENCFF613LAW 7769241 ENCODE Processing Pipeline a513e1e86eaf8174ef8b50c30164b516 https://www.encodeproject.org/files/ENCFF546XJX/@@download/ENCFF546XJX.bigBed GRCh38 released biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF910AUJ bed narrowPeak conservative idr thresholded peaks ENCSR000EWI ChIP-seq EFO:0002067 K562 cell line Homo sapiens SETDB1-human ENCAB000AKP DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF419RSJ, ENCFF540CBP, ENCFF611CFB, ENCFF613LAW 59636 ENCODE Processing Pipeline 9dfd97e709c9cc1a8860fc1a39014f6f https://www.encodeproject.org/files/ENCFF910AUJ/@@download/ENCFF910AUJ.bed.gz GRCh38 released biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF118HRB bigWig signal p-value ENCSR000EWI ChIP-seq EFO:0002067 K562 cell line Homo sapiens SETDB1-human ENCAB000AKP DNA see document see document False 2011-10-29 ENCODE 1 ENCFF355SGP, ENCFF728IYF 379320957 ENCODE Processing Pipeline 50dcb6b926ee2155f8042c32d357f226 https://www.encodeproject.org/files/ENCFF118HRB/@@download/ENCFF118HRB.bigWig GRCh38 released biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF139NEQ bigWig fold change over control ENCSR000EWI ChIP-seq EFO:0002067 K562 cell line Homo sapiens SETDB1-human ENCAB000AKP DNA see document see document False 2011-10-29 ENCODE 1 ENCFF355SGP, ENCFF728IYF 247462832 ENCODE Processing Pipeline 037e80cdec9395fb5b001c8cf4726f32 https://www.encodeproject.org/files/ENCFF139NEQ/@@download/ENCFF139NEQ.bigWig GRCh38 released biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF215AYB bigBed narrowPeak peaks ENCSR000EWI ChIP-seq EFO:0002067 K562 cell line Homo sapiens SETDB1-human ENCAB000AKP DNA see document see document False 2011-10-29 ENCODE 1 ENCFF540CBP 12876865 ENCODE Processing Pipeline 190d404ee732c189b5f5cfb7b5783a54 https://www.encodeproject.org/files/ENCFF215AYB/@@download/ENCFF215AYB.bigBed GRCh38 released biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF727DQN bigBed narrowPeak optimal idr thresholded peaks ENCSR000EWI ChIP-seq EFO:0002067 K562 cell line Homo sapiens SETDB1-human ENCAB000AKP DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF690WNQ 203444 ENCODE Processing Pipeline 714355e6723aeb81c3a8b9248db7bd8a https://www.encodeproject.org/files/ENCFF727DQN/@@download/ENCFF727DQN.bigBed GRCh38 released biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF534VEA bam unfiltered alignments ENCSR000EWI ChIP-seq EFO:0002067 K562 cell line Homo sapiens SETDB1-human ENCAB000AKP DNA see document see document False 2011-10-29 ENCODE 2 32 ENCFF000YZJ, ENCFF643CGH 817695921 ENCODE Processing Pipeline 791dc65709fe3836b04cd5aeebd9044e https://www.encodeproject.org/files/ENCFF534VEA/@@download/ENCFF534VEA.bam GRCh38 released biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF613LAW bed narrowPeak peaks ENCSR000EWI ChIP-seq EFO:0002067 K562 cell line Homo sapiens SETDB1-human ENCAB000AKP DNA see document see document False 2011-10-29 ENCODE 2 ENCFF355SGP, ENCFF874YYW 3394408 ENCODE Processing Pipeline 9f1adf22b56621e24e4abf84c713ec69 https://www.encodeproject.org/files/ENCFF613LAW/@@download/ENCFF613LAW.bed.gz GRCh38 released biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF611CFB bed narrowPeak peaks ENCSR000EWI ChIP-seq EFO:0002067 K562 cell line Homo sapiens SETDB1-human ENCAB000AKP DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF355SGP, ENCFF728IYF, ENCFF874YYW 5748030 ENCODE Processing Pipeline d6c7519ab4c6f2d248ba03d1cd5f9b7e https://www.encodeproject.org/files/ENCFF611CFB/@@download/ENCFF611CFB.bed.gz GRCh38 released biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF247BJO bam alignments ENCSR000EWI ChIP-seq EFO:0002067 K562 cell line Homo sapiens SETDB1-human ENCAB000AKP DNA see document see document False 2011-10-29 ENCODE 1 32 ENCFF000YZH, ENCFF807MUK 413767054 ENCODE Processing Pipeline 03cb1ee4fef50eed650cbbf99c2d9113 https://www.encodeproject.org/files/ENCFF247BJO/@@download/ENCFF247BJO.bam hg19 released biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF860RUD bam unfiltered alignments ENCSR000EWI ChIP-seq EFO:0002067 K562 cell line Homo sapiens SETDB1-human ENCAB000AKP DNA see document see document False 2011-10-29 ENCODE 2 32 ENCFF000YZJ, ENCFF807MUK 816288752 ENCODE Processing Pipeline 82476065eef62bddf48cabb4f80528d4 https://www.encodeproject.org/files/ENCFF860RUD/@@download/ENCFF860RUD.bam hg19 released biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF210CIB bam alignments ENCSR000EWI ChIP-seq EFO:0002067 K562 cell line Homo sapiens SETDB1-human ENCAB000AKP DNA see document see document False 2011-10-29 ENCODE 2 32 ENCFF000YZJ, ENCFF807MUK 272527320 ENCODE Processing Pipeline 24073cac02e29038e8dab61ca30a5c1c https://www.encodeproject.org/files/ENCFF210CIB/@@download/ENCFF210CIB.bam hg19 released biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF385SUJ bigWig signal p-value ENCSR000EWI ChIP-seq EFO:0002067 K562 cell line Homo sapiens SETDB1-human ENCAB000AKP DNA see document see document False 2011-10-29 ENCODE 1 ENCFF051ZZR, ENCFF247BJO 356617988 ENCODE Processing Pipeline afec9cae273970ba66bd2a4a19c1b273 https://www.encodeproject.org/files/ENCFF385SUJ/@@download/ENCFF385SUJ.bigWig hg19 released biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF184LHT bam unfiltered alignments ENCSR000EWI ChIP-seq EFO:0002067 K562 cell line Homo sapiens SETDB1-human ENCAB000AKP DNA see document see document False 2011-10-29 ENCODE 1 32 ENCFF000YZH, ENCFF807MUK 1431498383 ENCODE Processing Pipeline 4ddab7d0b8c7191b0a25e9d7a2df61ce https://www.encodeproject.org/files/ENCFF184LHT/@@download/ENCFF184LHT.bam hg19 released biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF980GCB bigWig signal p-value ENCSR000EWI ChIP-seq EFO:0002067 K562 cell line Homo sapiens SETDB1-human ENCAB000AKP DNA see document see document False 2011-10-29 ENCODE 2 ENCFF051ZZR, ENCFF210CIB 377535772 ENCODE Processing Pipeline 2716828d46f9950ed8fa98b1d06520fe https://www.encodeproject.org/files/ENCFF980GCB/@@download/ENCFF980GCB.bigWig hg19 released biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF417WRG bigWig fold change over control ENCSR000EWI ChIP-seq EFO:0002067 K562 cell line Homo sapiens SETDB1-human ENCAB000AKP DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF051ZZR, ENCFF210CIB, ENCFF247BJO 350302072 ENCODE Processing Pipeline 939b13f9c47dc296b1a0e65d039c17d9 https://www.encodeproject.org/files/ENCFF417WRG/@@download/ENCFF417WRG.bigWig hg19 released biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF463JJS bed narrowPeak peaks ENCSR000EWI ChIP-seq EFO:0002067 K562 cell line Homo sapiens SETDB1-human ENCAB000AKP DNA see document see document False 2011-10-29 ENCODE 1 ENCFF051ZZR, ENCFF247BJO 5345657 ENCODE Processing Pipeline 3431b39818c317d9293ded2e754c7f64 https://www.encodeproject.org/files/ENCFF463JJS/@@download/ENCFF463JJS.bed.gz hg19 released biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF269JVH bed narrowPeak peaks ENCSR000EWI ChIP-seq EFO:0002067 K562 cell line Homo sapiens SETDB1-human ENCAB000AKP DNA see document see document False 2011-10-29 ENCODE 2 ENCFF051ZZR, ENCFF210CIB 3458692 ENCODE Processing Pipeline a8f02fb68b875e901a7c8caea5dd4008 https://www.encodeproject.org/files/ENCFF269JVH/@@download/ENCFF269JVH.bed.gz hg19 released biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF365HOJ bigBed narrowPeak optimal idr thresholded peaks ENCSR000EWI ChIP-seq EFO:0002067 K562 cell line Homo sapiens SETDB1-human ENCAB000AKP DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF294EHN 201314 ENCODE Processing Pipeline 8349504f453cd40c9e94a9ede8560fde https://www.encodeproject.org/files/ENCFF365HOJ/@@download/ENCFF365HOJ.bigBed hg19 released biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF891JVV bigWig signal p-value ENCSR000EWI ChIP-seq EFO:0002067 K562 cell line Homo sapiens SETDB1-human ENCAB000AKP DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF051ZZR, ENCFF210CIB, ENCFF247BJO 402142065 ENCODE Processing Pipeline 70fe5aff6cf3e10a3e28a62f1d39cb56 https://www.encodeproject.org/files/ENCFF891JVV/@@download/ENCFF891JVV.bigWig hg19 released biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF187VPA bigWig fold change over control ENCSR000EWI ChIP-seq EFO:0002067 K562 cell line Homo sapiens SETDB1-human ENCAB000AKP DNA see document see document False 2011-10-29 ENCODE 2 ENCFF051ZZR, ENCFF210CIB 158021218 ENCODE Processing Pipeline c6404dd74e9b79456bf450eb95e474aa https://www.encodeproject.org/files/ENCFF187VPA/@@download/ENCFF187VPA.bigWig hg19 released biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF566ENS bigBed narrowPeak peaks ENCSR000EWI ChIP-seq EFO:0002067 K562 cell line Homo sapiens SETDB1-human ENCAB000AKP DNA see document see document False 2011-10-29 ENCODE 2 ENCFF269JVH 7854052 ENCODE Processing Pipeline 9601ff5131505cacf26605c80fb824c2 https://www.encodeproject.org/files/ENCFF566ENS/@@download/ENCFF566ENS.bigBed hg19 released biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF422XHH bigBed narrowPeak peaks ENCSR000EWI ChIP-seq EFO:0002067 K562 cell line Homo sapiens SETDB1-human ENCAB000AKP DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF445HEP 13071260 ENCODE Processing Pipeline 1d2e072d90419991e3427d5d6de89639 https://www.encodeproject.org/files/ENCFF422XHH/@@download/ENCFF422XHH.bigBed hg19 released biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF865APC bed narrowPeak conservative idr thresholded peaks ENCSR000EWI ChIP-seq EFO:0002067 K562 cell line Homo sapiens SETDB1-human ENCAB000AKP DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF001TDO, ENCFF269JVH, ENCFF445HEP, ENCFF463JJS 60744 ENCODE Processing Pipeline b5888e91a655043773b77bd7a9da9729 https://www.encodeproject.org/files/ENCFF865APC/@@download/ENCFF865APC.bed.gz hg19 released biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF763JNS bigWig fold change over control ENCSR000EWI ChIP-seq EFO:0002067 K562 cell line Homo sapiens SETDB1-human ENCAB000AKP DNA see document see document False 2011-10-29 ENCODE 1 ENCFF051ZZR, ENCFF247BJO 238056518 ENCODE Processing Pipeline fd01182bf2cea1bdc0ddf8eeecd47f06 https://www.encodeproject.org/files/ENCFF763JNS/@@download/ENCFF763JNS.bigWig hg19 released biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF445HEP bed narrowPeak peaks ENCSR000EWI ChIP-seq EFO:0002067 K562 cell line Homo sapiens SETDB1-human ENCAB000AKP DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF051ZZR, ENCFF210CIB, ENCFF247BJO 5768659 ENCODE Processing Pipeline 936c0f9544eb861a2629a69dacdac214 https://www.encodeproject.org/files/ENCFF445HEP/@@download/ENCFF445HEP.bed.gz hg19 released biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF294EHN bed narrowPeak optimal idr thresholded peaks ENCSR000EWI ChIP-seq EFO:0002067 K562 cell line Homo sapiens SETDB1-human ENCAB000AKP DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF001TDO, ENCFF269JVH, ENCFF445HEP, ENCFF463JJS 74645 ENCODE Processing Pipeline f88de9d2471f83c6198379e4cbf8920a https://www.encodeproject.org/files/ENCFF294EHN/@@download/ENCFF294EHN.bed.gz hg19 released biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF255LLS bigBed narrowPeak peaks ENCSR000EWI ChIP-seq EFO:0002067 K562 cell line Homo sapiens SETDB1-human ENCAB000AKP DNA see document see document False 2011-10-29 ENCODE 1 ENCFF463JJS 12868827 ENCODE Processing Pipeline 45d69ad102bead8367410ef25dc3d559 https://www.encodeproject.org/files/ENCFF255LLS/@@download/ENCFF255LLS.bigBed hg19 released biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF438XQT bigBed narrowPeak conservative idr thresholded peaks ENCSR000EWI ChIP-seq EFO:0002067 K562 cell line Homo sapiens SETDB1-human ENCAB000AKP DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF865APC 178965 ENCODE Processing Pipeline 56dc6eda91a8c0c2722f339f3330e9eb https://www.encodeproject.org/files/ENCFF438XQT/@@download/ENCFF438XQT.bigBed hg19 released biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF473RRN bam unfiltered alignments ENCSR385AHH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF24-human ENCAB060JJI DNA False 2016-04-21 ENCODE 2 100 ENCFF807MUK, ENCFF931UCZ, ENCFF965QBT 7710926707 ENCODE Processing Pipeline 87eec8e3f9dfed5763239742a2fcf232 https://www.encodeproject.org/files/ENCFF473RRN/@@download/ENCFF473RRN.bam hg19 released missing control alignments ENCFF004EVN bam unfiltered alignments ENCSR385AHH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF24-human ENCAB060JJI DNA False 2016-04-21 ENCODE 3 100 ENCFF294CYY, ENCFF546WQO, ENCFF807MUK 6845647226 ENCODE Processing Pipeline 71319e58e435ed78aa70806fbe1e5660 https://www.encodeproject.org/files/ENCFF004EVN/@@download/ENCFF004EVN.bam hg19 released missing control alignments ENCFF546WQO fastq reads ENCSR385AHH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF24-human ENCAB060JJI DNA False 2016-04-21 ENCODE 3 1 100 paired-ended 1 ENCFF294CYY 3209337166 Michael Snyder, Stanford 9cc8fcc6e278ca61c5135bc5967f8ab4 SRA:SRR5111519 https://www.encodeproject.org/files/ENCFF546WQO/@@download/ENCFF546WQO.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFF/ released missing control alignments ENCFF931UCZ fastq reads ENCSR385AHH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF24-human ENCAB060JJI DNA False 2016-04-21 ENCODE 2 1 100 paired-ended 1 ENCFF965QBT 3533125859 Michael Snyder, Stanford 0022f097a9ca22fde3beea3ff3f6a892 SRA:SRR5111518 https://www.encodeproject.org/files/ENCFF931UCZ/@@download/ENCFF931UCZ.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFD/ released missing control alignments ENCFF965QBT fastq reads ENCSR385AHH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF24-human ENCAB060JJI DNA False 2016-04-21 ENCODE 2 1 100 paired-ended 2 ENCFF931UCZ 3593380186 Michael Snyder, Stanford e7dcf6973402d334d963b8f11e1e14ba SRA:SRR5111518 https://www.encodeproject.org/files/ENCFF965QBT/@@download/ENCFF965QBT.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFA/ released missing control alignments ENCFF294CYY fastq reads ENCSR385AHH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF24-human ENCAB060JJI DNA False 2016-04-21 ENCODE 3 1 100 paired-ended 2 ENCFF546WQO 3271327121 Michael Snyder, Stanford a5936e4a68671099d44d434fa7adfad0 SRA:SRR5111519 https://www.encodeproject.org/files/ENCFF294CYY/@@download/ENCFF294CYY.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFH/ released missing control alignments ENCFF967XYK bam alignments ENCSR385AHH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF24-human ENCAB060JJI DNA False 2016-04-21 ENCODE 3 100 ENCFF294CYY, ENCFF546WQO, ENCFF807MUK 5781604052 ENCODE Processing Pipeline a4b90b1706ebd6048e869e36b0866adf https://www.encodeproject.org/files/ENCFF967XYK/@@download/ENCFF967XYK.bam hg19 released missing control alignments ENCFF951UTH bam alignments ENCSR385AHH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF24-human ENCAB060JJI DNA False 2016-04-21 ENCODE 2 100 ENCFF807MUK, ENCFF931UCZ, ENCFF965QBT 6969495186 ENCODE Processing Pipeline 36411d45f3c050fd2771f5c95b160d57 https://www.encodeproject.org/files/ENCFF951UTH/@@download/ENCFF951UTH.bam hg19 released missing control alignments ENCFF266VXO bigBed narrowPeak peaks ENCSR385AHH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF24-human ENCAB060JJI DNA False 2016-04-21 ENCODE 3 ENCFF980UAQ 13376718 ENCODE Processing Pipeline 3d3cbee877086c36a47a4440fd6253b0 https://www.encodeproject.org/files/ENCFF266VXO/@@download/ENCFF266VXO.bigBed hg19 released missing control alignments ENCFF282CAH bigWig fold change over control ENCSR385AHH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF24-human ENCAB060JJI DNA False 2016-04-21 ENCODE 2, 3 ENCFF051LWI, ENCFF581ZJL, ENCFF951UTH, ENCFF967XYK 2487819241 ENCODE Processing Pipeline f8fe9eb99ee108bce43b547fe5f5a8ab https://www.encodeproject.org/files/ENCFF282CAH/@@download/ENCFF282CAH.bigWig hg19 released missing control alignments ENCFF785AFW bigBed narrowPeak peaks ENCSR385AHH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF24-human ENCAB060JJI DNA False 2016-04-21 ENCODE 2, 3 ENCFF186JNG 13310206 ENCODE Processing Pipeline 667a3bb2d30a7d2e9579b67e4191dad0 https://www.encodeproject.org/files/ENCFF785AFW/@@download/ENCFF785AFW.bigBed hg19 released missing control alignments ENCFF014KVJ bigWig fold change over control ENCSR385AHH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF24-human ENCAB060JJI DNA False 2016-04-21 ENCODE 2 ENCFF051LWI, ENCFF581ZJL, ENCFF951UTH 1942603305 ENCODE Processing Pipeline ed33d82c373989110efa68cf1ed41d89 https://www.encodeproject.org/files/ENCFF014KVJ/@@download/ENCFF014KVJ.bigWig hg19 released missing control alignments ENCFF007DDA bigWig signal p-value ENCSR385AHH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF24-human ENCAB060JJI DNA False 2016-04-21 ENCODE 3 ENCFF581ZJL, ENCFF967XYK 1217428314 ENCODE Processing Pipeline d69c58eb8de352ffdb379280ec1c180b https://www.encodeproject.org/files/ENCFF007DDA/@@download/ENCFF007DDA.bigWig hg19 released missing control alignments ENCFF186MHH bigWig signal p-value ENCSR385AHH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF24-human ENCAB060JJI DNA False 2016-04-21 ENCODE 2, 3 ENCFF051LWI, ENCFF581ZJL, ENCFF951UTH, ENCFF967XYK 2367537609 ENCODE Processing Pipeline f55b75868ad6b0325f0f9f8cacd3f0c9 https://www.encodeproject.org/files/ENCFF186MHH/@@download/ENCFF186MHH.bigWig hg19 released missing control alignments ENCFF651RGN bigBed narrowPeak peaks ENCSR385AHH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF24-human ENCAB060JJI DNA False 2016-04-21 ENCODE 2 ENCFF420MBN 11322648 ENCODE Processing Pipeline 9c7412568db39cd3436cb2cd5b7d9a4f https://www.encodeproject.org/files/ENCFF651RGN/@@download/ENCFF651RGN.bigBed hg19 released missing control alignments ENCFF626LDU bigWig signal p-value ENCSR385AHH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF24-human ENCAB060JJI DNA False 2016-04-21 ENCODE 2 ENCFF051LWI, ENCFF581ZJL, ENCFF951UTH 1961852190 ENCODE Processing Pipeline e144d0568eb5a83edcb3b4617456d664 https://www.encodeproject.org/files/ENCFF626LDU/@@download/ENCFF626LDU.bigWig hg19 released missing control alignments ENCFF289WJI bigWig fold change over control ENCSR385AHH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF24-human ENCAB060JJI DNA False 2016-04-21 ENCODE 3 ENCFF581ZJL, ENCFF967XYK 1401236885 ENCODE Processing Pipeline 45542e8738a2f308b73c6960f06bdf5c https://www.encodeproject.org/files/ENCFF289WJI/@@download/ENCFF289WJI.bigWig hg19 released missing control alignments ENCFF420MBN bed narrowPeak peaks ENCSR385AHH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF24-human ENCAB060JJI DNA False 2016-04-21 ENCODE 2 ENCFF051LWI, ENCFF581ZJL, ENCFF951UTH 7005846 ENCODE Processing Pipeline 9105af60d97e15745da580d902c1dbe1 https://www.encodeproject.org/files/ENCFF420MBN/@@download/ENCFF420MBN.bed.gz hg19 released missing control alignments ENCFF980UAQ bed narrowPeak peaks ENCSR385AHH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF24-human ENCAB060JJI DNA False 2016-04-21 ENCODE 3 ENCFF581ZJL, ENCFF967XYK 6886863 ENCODE Processing Pipeline 4451bcb37eb9571933343a709a60e8de https://www.encodeproject.org/files/ENCFF980UAQ/@@download/ENCFF980UAQ.bed.gz hg19 released missing control alignments ENCFF186JNG bed narrowPeak peaks ENCSR385AHH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF24-human ENCAB060JJI DNA False 2016-04-21 ENCODE 2, 3 ENCFF051LWI, ENCFF581ZJL, ENCFF951UTH, ENCFF967XYK 7260274 ENCODE Processing Pipeline 86c6856a23182b2bae130377bc710876 https://www.encodeproject.org/files/ENCFF186JNG/@@download/ENCFF186JNG.bed.gz hg19 released missing control alignments ENCFF593RXC bam unfiltered alignments ENCSR385AHH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF24-human ENCAB060JJI DNA False 2016-04-21 ENCODE 2 100 ENCFF643CGH, ENCFF931UCZ, ENCFF965QBT 7723988763 ENCODE Processing Pipeline 8bf2f457e6279c3e65c378f1c845c93c https://www.encodeproject.org/files/ENCFF593RXC/@@download/ENCFF593RXC.bam GRCh38 released missing control alignments ENCFF707ZKL bam unfiltered alignments ENCSR385AHH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF24-human ENCAB060JJI DNA False 2016-04-21 ENCODE 3 100 ENCFF294CYY, ENCFF546WQO, ENCFF643CGH 6852447771 ENCODE Processing Pipeline 8ff5131106f3dda035ff2f60e95865c0 https://www.encodeproject.org/files/ENCFF707ZKL/@@download/ENCFF707ZKL.bam GRCh38 released missing control alignments ENCFF686ZIH bam alignments ENCSR385AHH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF24-human ENCAB060JJI DNA False 2016-04-21 ENCODE 3 100 ENCFF294CYY, ENCFF546WQO, ENCFF643CGH 5782004581 ENCODE Processing Pipeline 7df3f17d547c04c501f51f9a818a12a0 https://www.encodeproject.org/files/ENCFF686ZIH/@@download/ENCFF686ZIH.bam GRCh38 released missing control alignments ENCFF786MHJ bam alignments ENCSR385AHH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF24-human ENCAB060JJI DNA False 2016-04-21 ENCODE 2 100 ENCFF643CGH, ENCFF931UCZ, ENCFF965QBT 6972290190 ENCODE Processing Pipeline cb4f3e8695e9b325732b116d7af049a6 https://www.encodeproject.org/files/ENCFF786MHJ/@@download/ENCFF786MHJ.bam GRCh38 released missing control alignments ENCFF502WNY bigWig signal p-value ENCSR385AHH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF24-human ENCAB060JJI DNA False 2016-04-21 ENCODE 2 ENCFF786MHJ 1687954327 ENCODE Processing Pipeline a7028a879c6e969419c79069f0d0ce75 https://www.encodeproject.org/files/ENCFF502WNY/@@download/ENCFF502WNY.bigWig GRCh38 released missing control alignments ENCFF340MBA bigWig signal p-value ENCSR385AHH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF24-human ENCAB060JJI DNA False 2016-04-21 ENCODE 3 ENCFF686ZIH 1214995286 ENCODE Processing Pipeline 7483bf4eb400ae51bf5e4dff4ac7900d https://www.encodeproject.org/files/ENCFF340MBA/@@download/ENCFF340MBA.bigWig GRCh38 released missing control alignments ENCFF886LIA bigWig signal p-value ENCSR385AHH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF24-human ENCAB060JJI DNA False 2016-04-21 ENCODE 2, 3 ENCFF686ZIH, ENCFF786MHJ 1977064999 ENCODE Processing Pipeline 16429cd4eb73d2f6e4e53402c1bb5c89 https://www.encodeproject.org/files/ENCFF886LIA/@@download/ENCFF886LIA.bigWig GRCh38 released missing control alignments ENCFF695WYU bigWig fold change over control ENCSR385AHH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF24-human ENCAB060JJI DNA False 2016-04-21 ENCODE 2 ENCFF786MHJ 1947883544 ENCODE Processing Pipeline a1ff65a4cfe3aad3f5415f0e86f2578d https://www.encodeproject.org/files/ENCFF695WYU/@@download/ENCFF695WYU.bigWig GRCh38 released missing control alignments ENCFF661WTR bigWig fold change over control ENCSR385AHH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF24-human ENCAB060JJI DNA False 2016-04-21 ENCODE 3 ENCFF686ZIH 1412589791 ENCODE Processing Pipeline 486dd83cd2f894a234848963a7a0f56c https://www.encodeproject.org/files/ENCFF661WTR/@@download/ENCFF661WTR.bigWig GRCh38 released missing control alignments ENCFF468PJO bigWig fold change over control ENCSR385AHH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF24-human ENCAB060JJI DNA False 2016-04-21 ENCODE 2, 3 ENCFF686ZIH, ENCFF786MHJ 2491542931 ENCODE Processing Pipeline 5902e33795cc75f410f56c8eabb48d9c https://www.encodeproject.org/files/ENCFF468PJO/@@download/ENCFF468PJO.bigWig GRCh38 released missing control alignments ENCFF028FED bed narrowPeak peaks ENCSR385AHH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF24-human ENCAB060JJI DNA False 2016-04-21 ENCODE 2 ENCFF786MHJ 6938291 ENCODE Processing Pipeline 38d617012fceaa131e30058d7dc5b6d5 https://www.encodeproject.org/files/ENCFF028FED/@@download/ENCFF028FED.bed.gz GRCh38 released missing control alignments ENCFF906TXC bed narrowPeak peaks ENCSR385AHH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF24-human ENCAB060JJI DNA False 2016-04-21 ENCODE 2, 3 ENCFF686ZIH, ENCFF786MHJ 7260939 ENCODE Processing Pipeline ca2738ca9624452db3f5f39dbe24b11b https://www.encodeproject.org/files/ENCFF906TXC/@@download/ENCFF906TXC.bed.gz GRCh38 released missing control alignments ENCFF674JOQ bigBed narrowPeak peaks ENCSR385AHH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF24-human ENCAB060JJI DNA False 2016-04-21 ENCODE 2 ENCFF028FED 11342751 ENCODE Processing Pipeline 9cefdd276293232136a853f74d2385e4 https://www.encodeproject.org/files/ENCFF674JOQ/@@download/ENCFF674JOQ.bigBed GRCh38 released missing control alignments ENCFF319DVI bigBed narrowPeak peaks ENCSR385AHH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF24-human ENCAB060JJI DNA False 2016-04-21 ENCODE 2, 3 ENCFF906TXC 13326776 ENCODE Processing Pipeline 5bf6840bbbe6314d961c17f991fb3dec https://www.encodeproject.org/files/ENCFF319DVI/@@download/ENCFF319DVI.bigBed GRCh38 released missing control alignments ENCFF723JDW bed narrowPeak optimal idr thresholded peaks ENCSR385AHH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF24-human ENCAB060JJI DNA False 2016-04-21 ENCODE 2, 3 ENCFF028FED, ENCFF419RSJ, ENCFF906TXC, ENCFF987AHA 336190 ENCODE Processing Pipeline 22f8e676daeb979e726fc1f4d8bcdab8 https://www.encodeproject.org/files/ENCFF723JDW/@@download/ENCFF723JDW.bed.gz GRCh38 released missing control alignments ENCFF153GWB bigBed narrowPeak optimal idr thresholded peaks ENCSR385AHH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF24-human ENCAB060JJI DNA False 2016-04-21 ENCODE 2, 3 ENCFF723JDW 604713 ENCODE Processing Pipeline 0b2baa6f70f1990028d18466351aa01b https://www.encodeproject.org/files/ENCFF153GWB/@@download/ENCFF153GWB.bigBed GRCh38 released missing control alignments ENCFF987AHA bed narrowPeak peaks ENCSR385AHH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF24-human ENCAB060JJI DNA False 2016-04-21 ENCODE 3 ENCFF686ZIH 6779705 ENCODE Processing Pipeline d5fb3ecd68c46f26c97a273b1dbcbdd7 https://www.encodeproject.org/files/ENCFF987AHA/@@download/ENCFF987AHA.bed.gz GRCh38 released missing control alignments ENCFF941XDH bed narrowPeak conservative idr thresholded peaks ENCSR385AHH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF24-human ENCAB060JJI DNA False 2016-04-21 ENCODE 2, 3 ENCFF028FED, ENCFF419RSJ, ENCFF906TXC, ENCFF987AHA 236055 ENCODE Processing Pipeline 1a5ed1ab7cd79a64a4142eefd90aabf2 https://www.encodeproject.org/files/ENCFF941XDH/@@download/ENCFF941XDH.bed.gz GRCh38 released missing control alignments ENCFF951CTG bigBed narrowPeak conservative idr thresholded peaks ENCSR385AHH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF24-human ENCAB060JJI DNA False 2016-04-21 ENCODE 2, 3 ENCFF941XDH 465341 ENCODE Processing Pipeline 938a57e83a01d4673945295393712009 https://www.encodeproject.org/files/ENCFF951CTG/@@download/ENCFF951CTG.bigBed GRCh38 released missing control alignments ENCFF865ODE bigBed narrowPeak peaks ENCSR385AHH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF24-human ENCAB060JJI DNA False 2016-04-21 ENCODE 3 ENCFF987AHA 13390319 ENCODE Processing Pipeline b42b9da38d0c3a43c9f899b047eb7f98 https://www.encodeproject.org/files/ENCFF865ODE/@@download/ENCFF865ODE.bigBed GRCh38 released missing control alignments ENCFF933ZIS bed narrowPeak conservative idr thresholded peaks ENCSR385AHH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF24-human ENCAB060JJI DNA False 2016-04-21 ENCODE 2, 3 ENCFF001TDO, ENCFF186JNG, ENCFF420MBN, ENCFF980UAQ 194534 ENCODE Processing Pipeline 0ac55263e7087ce526ce18e15369eebb https://www.encodeproject.org/files/ENCFF933ZIS/@@download/ENCFF933ZIS.bed.gz hg19 released missing control alignments ENCFF781BNQ bigBed narrowPeak conservative idr thresholded peaks ENCSR385AHH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF24-human ENCAB060JJI DNA False 2016-04-21 ENCODE 2, 3 ENCFF933ZIS 405744 ENCODE Processing Pipeline b131e6737a983fad054139e5e1402877 https://www.encodeproject.org/files/ENCFF781BNQ/@@download/ENCFF781BNQ.bigBed hg19 released missing control alignments ENCFF238MYM bed narrowPeak optimal idr thresholded peaks ENCSR385AHH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF24-human ENCAB060JJI DNA False 2016-04-21 ENCODE 2, 3 ENCFF001TDO, ENCFF186JNG, ENCFF420MBN, ENCFF980UAQ 280876 ENCODE Processing Pipeline e3c5e27d52c123cb162294504181685d https://www.encodeproject.org/files/ENCFF238MYM/@@download/ENCFF238MYM.bed.gz hg19 released missing control alignments ENCFF013NFH bigBed narrowPeak optimal idr thresholded peaks ENCSR385AHH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF24-human ENCAB060JJI DNA False 2016-04-21 ENCODE 2, 3 ENCFF238MYM 521212 ENCODE Processing Pipeline 43b79a9531c32ae7070b4f95f6f140f9 https://www.encodeproject.org/files/ENCFF013NFH/@@download/ENCFF013NFH.bigBed hg19 released missing control alignments ENCFF681LII bam unfiltered alignments ENCSR808AKZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens BCOR-human ENCAB461XEH DNA False 2016-09-01 ENCODE 2 100 ENCFF047XMV, ENCFF423KKF, ENCFF807MUK 5901000050 ENCODE Processing Pipeline d1bd745d0233f54ae8c57b2a70887e1b https://www.encodeproject.org/files/ENCFF681LII/@@download/ENCFF681LII.bam hg19 released ENCFF407XWO bam unfiltered alignments ENCSR808AKZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens BCOR-human ENCAB461XEH DNA False 2016-09-01 ENCODE 1 100 ENCFF036YYM, ENCFF807MUK, ENCFF949LLJ 5585050316 ENCODE Processing Pipeline f8792d4537312d6664b40f43232cd13a https://www.encodeproject.org/files/ENCFF407XWO/@@download/ENCFF407XWO.bam hg19 released ENCFF423KKF fastq reads ENCSR808AKZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens BCOR-human ENCAB461XEH DNA False 2016-09-01 ENCODE 2 1 100 paired-ended 1 ENCFF047XMV 2694373787 Michael Snyder, Stanford 574af51d4def37ad5ef29eb02fb9d811 SRA:SRR5112103 https://www.encodeproject.org/files/ENCFF423KKF/@@download/ENCFF423KKF.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFD/ released ENCFF036YYM fastq reads ENCSR808AKZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens BCOR-human ENCAB461XEH DNA False 2016-09-01 ENCODE 1 1 100 paired-ended 2 ENCFF949LLJ 2591112421 Michael Snyder, Stanford ce054a288e00de0b9072a52dd9ca1c02 SRA:SRR5112104 https://www.encodeproject.org/files/ENCFF036YYM/@@download/ENCFF036YYM.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFH/ released ENCFF047XMV fastq reads ENCSR808AKZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens BCOR-human ENCAB461XEH DNA False 2016-09-01 ENCODE 2 1 100 paired-ended 2 ENCFF423KKF 2763437605 Michael Snyder, Stanford b62b502fae03e94d54715c5148357b39 SRA:SRR5112103 https://www.encodeproject.org/files/ENCFF047XMV/@@download/ENCFF047XMV.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFA/ released ENCFF949LLJ fastq reads ENCSR808AKZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens BCOR-human ENCAB461XEH DNA False 2016-09-01 ENCODE 1 1 100 paired-ended 1 ENCFF036YYM 2523476452 Michael Snyder, Stanford e843f7530ad0eb416c5032fbe57929f3 SRA:SRR5112104 https://www.encodeproject.org/files/ENCFF949LLJ/@@download/ENCFF949LLJ.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFF/ released ENCFF367HYB bam alignments ENCSR808AKZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens BCOR-human ENCAB461XEH DNA False 2016-09-01 ENCODE 1 100 ENCFF036YYM, ENCFF807MUK, ENCFF949LLJ 4594559481 ENCODE Processing Pipeline ad7a06d383f969645326098c4c79bec4 https://www.encodeproject.org/files/ENCFF367HYB/@@download/ENCFF367HYB.bam hg19 released ENCFF367UIT bam alignments ENCSR808AKZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens BCOR-human ENCAB461XEH DNA False 2016-09-01 ENCODE 2 100 ENCFF047XMV, ENCFF423KKF, ENCFF807MUK 4882298919 ENCODE Processing Pipeline 8e9d2f76184f85e16e3c93620c75c90d https://www.encodeproject.org/files/ENCFF367UIT/@@download/ENCFF367UIT.bam hg19 released ENCFF158EOX bigWig signal p-value ENCSR808AKZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens BCOR-human ENCAB461XEH DNA False 2016-09-01 ENCODE 1 ENCFF367HYB, ENCFF581ZJL 1055474614 ENCODE Processing Pipeline acab4f52adb03c586a730110cdb0b49e https://www.encodeproject.org/files/ENCFF158EOX/@@download/ENCFF158EOX.bigWig hg19 released ENCFF393KYR bigWig signal p-value ENCSR808AKZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens BCOR-human ENCAB461XEH DNA False 2016-09-01 ENCODE 2 ENCFF051LWI, ENCFF367UIT 1139064768 ENCODE Processing Pipeline af1b95c349a100d2e368df3dca42a19e https://www.encodeproject.org/files/ENCFF393KYR/@@download/ENCFF393KYR.bigWig hg19 released ENCFF962OWV bigWig signal p-value ENCSR808AKZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens BCOR-human ENCAB461XEH DNA False 2016-09-01 ENCODE 1, 2 ENCFF051LWI, ENCFF367HYB, ENCFF367UIT, ENCFF581ZJL 1873256658 ENCODE Processing Pipeline 73342716dba379cfb45ba6ffd51a76e7 https://www.encodeproject.org/files/ENCFF962OWV/@@download/ENCFF962OWV.bigWig hg19 released ENCFF240NIX bigWig fold change over control ENCSR808AKZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens BCOR-human ENCAB461XEH DNA False 2016-09-01 ENCODE 1 ENCFF367HYB, ENCFF581ZJL 1221334911 ENCODE Processing Pipeline 8e008876b38e96c7a944acd833e408ae https://www.encodeproject.org/files/ENCFF240NIX/@@download/ENCFF240NIX.bigWig hg19 released ENCFF048RYA bigWig fold change over control ENCSR808AKZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens BCOR-human ENCAB461XEH DNA False 2016-09-01 ENCODE 2 ENCFF051LWI, ENCFF367UIT 1157252182 ENCODE Processing Pipeline ebf1d21aca72e65bb5c07467d1a723a6 https://www.encodeproject.org/files/ENCFF048RYA/@@download/ENCFF048RYA.bigWig hg19 released ENCFF243LGY bigWig fold change over control ENCSR808AKZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens BCOR-human ENCAB461XEH DNA False 2016-09-01 ENCODE 1, 2 ENCFF051LWI, ENCFF367HYB, ENCFF367UIT, ENCFF581ZJL 2141995702 ENCODE Processing Pipeline bee0e07ade7f24dce7c954f47e94f67e https://www.encodeproject.org/files/ENCFF243LGY/@@download/ENCFF243LGY.bigWig hg19 released ENCFF763UFC bed narrowPeak peaks ENCSR808AKZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens BCOR-human ENCAB461XEH DNA False 2016-09-01 ENCODE 2 ENCFF051LWI, ENCFF367UIT 7147888 ENCODE Processing Pipeline 50903e83e12dbeb447c95ecffa403841 https://www.encodeproject.org/files/ENCFF763UFC/@@download/ENCFF763UFC.bed.gz hg19 released ENCFF279NYK bed narrowPeak peaks ENCSR808AKZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens BCOR-human ENCAB461XEH DNA False 2016-09-01 ENCODE 1 ENCFF367HYB, ENCFF581ZJL 7069487 ENCODE Processing Pipeline b61f8701b5f98bac19965b927a3da8d4 https://www.encodeproject.org/files/ENCFF279NYK/@@download/ENCFF279NYK.bed.gz hg19 released ENCFF636VOC bed narrowPeak peaks ENCSR808AKZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens BCOR-human ENCAB461XEH DNA False 2016-09-01 ENCODE 1, 2 ENCFF051LWI, ENCFF367HYB, ENCFF367UIT, ENCFF581ZJL 7198879 ENCODE Processing Pipeline fe4dadc48f6e8f5c198831a8a6a8eb47 https://www.encodeproject.org/files/ENCFF636VOC/@@download/ENCFF636VOC.bed.gz hg19 released ENCFF436WTU bigBed narrowPeak peaks ENCSR808AKZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens BCOR-human ENCAB461XEH DNA False 2016-09-01 ENCODE 1 ENCFF279NYK 12882638 ENCODE Processing Pipeline b0037abf890aac9ef6735f777a00d2f5 https://www.encodeproject.org/files/ENCFF436WTU/@@download/ENCFF436WTU.bigBed hg19 released ENCFF078LQJ bigBed narrowPeak peaks ENCSR808AKZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens BCOR-human ENCAB461XEH DNA False 2016-09-01 ENCODE 2 ENCFF763UFC 12963517 ENCODE Processing Pipeline cacd4f5f3cb460d0875290b897f410db https://www.encodeproject.org/files/ENCFF078LQJ/@@download/ENCFF078LQJ.bigBed hg19 released ENCFF484GKF bigBed narrowPeak peaks ENCSR808AKZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens BCOR-human ENCAB461XEH DNA False 2016-09-01 ENCODE 1, 2 ENCFF636VOC 12852415 ENCODE Processing Pipeline e8c97131522daada7755367a1e4d2901 https://www.encodeproject.org/files/ENCFF484GKF/@@download/ENCFF484GKF.bigBed hg19 released ENCFF467YYR bed narrowPeak conservative idr thresholded peaks ENCSR808AKZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens BCOR-human ENCAB461XEH DNA False 2016-09-01 ENCODE 1, 2 ENCFF001TDO, ENCFF279NYK, ENCFF636VOC, ENCFF763UFC 593124 ENCODE Processing Pipeline c17a6f033f7ecb8e5b252c35b091d271 https://www.encodeproject.org/files/ENCFF467YYR/@@download/ENCFF467YYR.bed.gz hg19 released ENCFF057ZUY bed narrowPeak optimal idr thresholded peaks ENCSR808AKZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens BCOR-human ENCAB461XEH DNA False 2016-09-01 ENCODE 1, 2 ENCFF001TDO, ENCFF279NYK, ENCFF636VOC, ENCFF763UFC 794464 ENCODE Processing Pipeline eb1f9eb14541c9c86ab5f62539332276 https://www.encodeproject.org/files/ENCFF057ZUY/@@download/ENCFF057ZUY.bed.gz hg19 released ENCFF954LVJ bigBed narrowPeak conservative idr thresholded peaks ENCSR808AKZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens BCOR-human ENCAB461XEH DNA False 2016-09-01 ENCODE 1, 2 ENCFF467YYR 1111790 ENCODE Processing Pipeline ad4b34c14cfddd6b438763d5171ed049 https://www.encodeproject.org/files/ENCFF954LVJ/@@download/ENCFF954LVJ.bigBed hg19 released ENCFF607GZL bigBed narrowPeak optimal idr thresholded peaks ENCSR808AKZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens BCOR-human ENCAB461XEH DNA False 2016-09-01 ENCODE 1, 2 ENCFF057ZUY 1399751 ENCODE Processing Pipeline d98f8818a963b78fa5d7d848b2254b51 https://www.encodeproject.org/files/ENCFF607GZL/@@download/ENCFF607GZL.bigBed hg19 released ENCFF853ROL bam unfiltered alignments ENCSR808AKZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens BCOR-human ENCAB461XEH DNA False 2016-09-01 ENCODE 1 100 ENCFF036YYM, ENCFF643CGH, ENCFF949LLJ 5589339899 ENCODE Processing Pipeline c6732fa60e42b9b211b25a93f992587b https://www.encodeproject.org/files/ENCFF853ROL/@@download/ENCFF853ROL.bam GRCh38 released ENCFF996EBH bam unfiltered alignments ENCSR808AKZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens BCOR-human ENCAB461XEH DNA False 2016-09-01 ENCODE 2 100 ENCFF047XMV, ENCFF423KKF, ENCFF643CGH 5904868258 ENCODE Processing Pipeline 820518815a47f10c494b0696b0f6a972 https://www.encodeproject.org/files/ENCFF996EBH/@@download/ENCFF996EBH.bam GRCh38 released ENCFF207LND bam alignments ENCSR808AKZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens BCOR-human ENCAB461XEH DNA False 2016-09-01 ENCODE 1 100 ENCFF036YYM, ENCFF643CGH, ENCFF949LLJ 4597515174 ENCODE Processing Pipeline 80a0c86c3e1cf810dc17a9335f87dc53 https://www.encodeproject.org/files/ENCFF207LND/@@download/ENCFF207LND.bam GRCh38 released ENCFF541XEW bam alignments ENCSR808AKZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens BCOR-human ENCAB461XEH DNA False 2016-09-01 ENCODE 2 100 ENCFF047XMV, ENCFF423KKF, ENCFF643CGH 4885837359 ENCODE Processing Pipeline c87ab64d67941ce976f74ef436a7f823 https://www.encodeproject.org/files/ENCFF541XEW/@@download/ENCFF541XEW.bam GRCh38 released ENCFF679HUQ bigWig signal p-value ENCSR808AKZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens BCOR-human ENCAB461XEH DNA False 2016-09-01 ENCODE 1 ENCFF207LND, ENCFF910IKB 1269104755 ENCODE Processing Pipeline 2a8aba6ca9effba808e3a7da592e7e83 https://www.encodeproject.org/files/ENCFF679HUQ/@@download/ENCFF679HUQ.bigWig GRCh38 released ENCFF611STV bigWig signal p-value ENCSR808AKZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens BCOR-human ENCAB461XEH DNA False 2016-09-01 ENCODE 2 ENCFF227IZS, ENCFF541XEW 1020099226 ENCODE Processing Pipeline c0362bfa479ebc69d2de3a019ff05e9a https://www.encodeproject.org/files/ENCFF611STV/@@download/ENCFF611STV.bigWig GRCh38 released ENCFF809QYH bigWig signal p-value ENCSR808AKZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens BCOR-human ENCAB461XEH DNA False 2016-09-01 ENCODE 1, 2 ENCFF207LND, ENCFF227IZS, ENCFF541XEW, ENCFF910IKB 1814839030 ENCODE Processing Pipeline 79aaedd7d2d3ffb8acade1e88e5421c9 https://www.encodeproject.org/files/ENCFF809QYH/@@download/ENCFF809QYH.bigWig GRCh38 released ENCFF371GTB bigWig fold change over control ENCSR808AKZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens BCOR-human ENCAB461XEH DNA False 2016-09-01 ENCODE 1 ENCFF207LND, ENCFF910IKB 1217755467 ENCODE Processing Pipeline 2d2bd52281418914f303ffb0ef26308a https://www.encodeproject.org/files/ENCFF371GTB/@@download/ENCFF371GTB.bigWig GRCh38 released ENCFF740SZG bigWig fold change over control ENCSR808AKZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens BCOR-human ENCAB461XEH DNA False 2016-09-01 ENCODE 2 ENCFF227IZS, ENCFF541XEW 1210537632 ENCODE Processing Pipeline f904382087a7d3b7ccd69508e8111c1f https://www.encodeproject.org/files/ENCFF740SZG/@@download/ENCFF740SZG.bigWig GRCh38 released ENCFF464MCC bigWig fold change over control ENCSR808AKZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens BCOR-human ENCAB461XEH DNA False 2016-09-01 ENCODE 1, 2 ENCFF207LND, ENCFF227IZS, ENCFF541XEW, ENCFF910IKB 2155504900 ENCODE Processing Pipeline 98539a289b22c36b1e9a1f714d7a4f79 https://www.encodeproject.org/files/ENCFF464MCC/@@download/ENCFF464MCC.bigWig GRCh38 released ENCFF765TQQ bed narrowPeak peaks ENCSR808AKZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens BCOR-human ENCAB461XEH DNA False 2016-09-01 ENCODE 1 ENCFF207LND, ENCFF910IKB 7013733 ENCODE Processing Pipeline 708f056acdeb1efaaa27d0aa6c8f9642 https://www.encodeproject.org/files/ENCFF765TQQ/@@download/ENCFF765TQQ.bed.gz GRCh38 released ENCFF347TKX bed narrowPeak peaks ENCSR808AKZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens BCOR-human ENCAB461XEH DNA False 2016-09-01 ENCODE 2 ENCFF227IZS, ENCFF541XEW 7061712 ENCODE Processing Pipeline 820c5a667db657dc69c5388522ed5ad2 https://www.encodeproject.org/files/ENCFF347TKX/@@download/ENCFF347TKX.bed.gz GRCh38 released ENCFF536VKO bed narrowPeak peaks ENCSR808AKZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens BCOR-human ENCAB461XEH DNA False 2016-09-01 ENCODE 1, 2 ENCFF207LND, ENCFF227IZS, ENCFF541XEW, ENCFF910IKB 7155199 ENCODE Processing Pipeline 97145b67e6b8b9ac8f4e7b61938bfe69 https://www.encodeproject.org/files/ENCFF536VKO/@@download/ENCFF536VKO.bed.gz GRCh38 released ENCFF502XAO bigBed narrowPeak peaks ENCSR808AKZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens BCOR-human ENCAB461XEH DNA False 2016-09-01 ENCODE 1 ENCFF765TQQ 12882132 ENCODE Processing Pipeline 6bd70c8c9c58e0538a56dfe1be5ff582 https://www.encodeproject.org/files/ENCFF502XAO/@@download/ENCFF502XAO.bigBed GRCh38 released ENCFF212IQF bigBed narrowPeak peaks ENCSR808AKZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens BCOR-human ENCAB461XEH DNA False 2016-09-01 ENCODE 2 ENCFF347TKX 12921627 ENCODE Processing Pipeline e3cab51c0403ecebbf746f8f87ab6198 https://www.encodeproject.org/files/ENCFF212IQF/@@download/ENCFF212IQF.bigBed GRCh38 released ENCFF845PGW bigBed narrowPeak peaks ENCSR808AKZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens BCOR-human ENCAB461XEH DNA False 2016-09-01 ENCODE 1, 2 ENCFF536VKO 12815627 ENCODE Processing Pipeline 40ba772598cb2b1675b4bb4b1505546d https://www.encodeproject.org/files/ENCFF845PGW/@@download/ENCFF845PGW.bigBed GRCh38 released ENCFF538UZE bed narrowPeak conservative idr thresholded peaks ENCSR808AKZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens BCOR-human ENCAB461XEH DNA False 2016-09-01 ENCODE 1, 2 ENCFF347TKX, ENCFF419RSJ, ENCFF536VKO, ENCFF765TQQ 579549 ENCODE Processing Pipeline 255d2c2f784199d077fe6369ae3b1551 https://www.encodeproject.org/files/ENCFF538UZE/@@download/ENCFF538UZE.bed.gz GRCh38 released ENCFF408HXX bigBed narrowPeak conservative idr thresholded peaks ENCSR808AKZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens BCOR-human ENCAB461XEH DNA False 2016-09-01 ENCODE 1, 2 ENCFF538UZE 1095753 ENCODE Processing Pipeline b89708c3cd52bff9156e336fa0304000 https://www.encodeproject.org/files/ENCFF408HXX/@@download/ENCFF408HXX.bigBed GRCh38 released ENCFF186JKG bed narrowPeak optimal idr thresholded peaks ENCSR808AKZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens BCOR-human ENCAB461XEH DNA False 2016-09-01 ENCODE 1, 2 ENCFF347TKX, ENCFF419RSJ, ENCFF536VKO, ENCFF765TQQ 787885 ENCODE Processing Pipeline 5fc56d41933b612a84f520ac8901c382 https://www.encodeproject.org/files/ENCFF186JKG/@@download/ENCFF186JKG.bed.gz GRCh38 released ENCFF975KNJ bigBed narrowPeak optimal idr thresholded peaks ENCSR808AKZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens BCOR-human ENCAB461XEH DNA False 2016-09-01 ENCODE 1, 2 ENCFF186JKG 1393304 ENCODE Processing Pipeline e9e3af326de5c16039d1543bbe767100 https://www.encodeproject.org/files/ENCFF975KNJ/@@download/ENCFF975KNJ.bigBed GRCh38 released ENCFF116JML bam unfiltered alignments ENCSR038RGL ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM7-human ENCAB658SAJ DNA False 2016-10-31 ENCODE 1 100 ENCFF712YHQ, ENCFF764UGY, ENCFF807MUK 4385045243 ENCODE Processing Pipeline 08402c6d043e140388891d338cf8b64d https://www.encodeproject.org/files/ENCFF116JML/@@download/ENCFF116JML.bam hg19 released low read depth, antibody characterized with exemption missing control alignments ENCFF257SXL bam unfiltered alignments ENCSR038RGL ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM7-human ENCAB658SAJ DNA False 2016-10-31 ENCODE 2 100 ENCFF224YLQ, ENCFF736AVM, ENCFF807MUK 4715493172 ENCODE Processing Pipeline 9c660ff951511e125108b8b02b7fbde5 https://www.encodeproject.org/files/ENCFF257SXL/@@download/ENCFF257SXL.bam hg19 released low read depth, antibody characterized with exemption missing control alignments ENCFF224YLQ fastq reads ENCSR038RGL ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM7-human ENCAB658SAJ DNA False 2016-10-31 ENCODE 2 1 100 paired-ended 1 ENCFF736AVM 2102200183 Michael Snyder, Stanford f4bf578e79d89b55c29db9626e779f93 SRA:SRR5112440 https://www.encodeproject.org/files/ENCFF224YLQ/@@download/ENCFF224YLQ.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFD/ released low read depth, antibody characterized with exemption missing control alignments ENCFF736AVM fastq reads ENCSR038RGL ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM7-human ENCAB658SAJ DNA False 2016-10-31 ENCODE 2 1 100 paired-ended 2 ENCFF224YLQ 2127802136 Michael Snyder, Stanford dafb1309e2efdd7fff60df466d9690e8 SRA:SRR5112440 https://www.encodeproject.org/files/ENCFF736AVM/@@download/ENCFF736AVM.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFA/ released low read depth, antibody characterized with exemption missing control alignments ENCFF712YHQ fastq reads ENCSR038RGL ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM7-human ENCAB658SAJ DNA False 2016-10-31 ENCODE 1 1 100 paired-ended 2 ENCFF764UGY 1985390606 Michael Snyder, Stanford a2f3839cc8bab73e4c47b4e81efcc26d SRA:SRR5112439 https://www.encodeproject.org/files/ENCFF712YHQ/@@download/ENCFF712YHQ.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFH/ released low read depth, antibody characterized with exemption missing control alignments ENCFF764UGY fastq reads ENCSR038RGL ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM7-human ENCAB658SAJ DNA False 2016-10-31 ENCODE 1 1 100 paired-ended 1 ENCFF712YHQ 1935779166 Michael Snyder, Stanford 2796459768c2944a0281fe8295cba3a2 SRA:SRR5112439 https://www.encodeproject.org/files/ENCFF764UGY/@@download/ENCFF764UGY.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFF/ released low read depth, antibody characterized with exemption missing control alignments ENCFF425DVG bam alignments ENCSR038RGL ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM7-human ENCAB658SAJ DNA False 2016-10-31 ENCODE 1 100 ENCFF712YHQ, ENCFF764UGY, ENCFF807MUK 3698860775 ENCODE Processing Pipeline 92fb0e43dca786c8ff71a9a39ae09877 https://www.encodeproject.org/files/ENCFF425DVG/@@download/ENCFF425DVG.bam hg19 released low read depth, antibody characterized with exemption missing control alignments ENCFF366IHT bam alignments ENCSR038RGL ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM7-human ENCAB658SAJ DNA False 2016-10-31 ENCODE 2 100 ENCFF224YLQ, ENCFF736AVM, ENCFF807MUK 4022646273 ENCODE Processing Pipeline eb1c393642f0d7dc422a5a9b3ffa546d https://www.encodeproject.org/files/ENCFF366IHT/@@download/ENCFF366IHT.bam hg19 released low read depth, antibody characterized with exemption missing control alignments ENCFF449SCR bigWig signal p-value ENCSR038RGL ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM7-human ENCAB658SAJ DNA False 2016-10-31 ENCODE 1 ENCFF425DVG, ENCFF581ZJL 951016081 ENCODE Processing Pipeline 0a320462d58a41ff96f978c5f90cf1ce https://www.encodeproject.org/files/ENCFF449SCR/@@download/ENCFF449SCR.bigWig hg19 released low read depth, antibody characterized with exemption missing control alignments ENCFF104LFN bigWig signal p-value ENCSR038RGL ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM7-human ENCAB658SAJ DNA False 2016-10-31 ENCODE 2 ENCFF051LWI, ENCFF366IHT 930842868 ENCODE Processing Pipeline 0fd4956ebc3b0835c08443956ad43003 https://www.encodeproject.org/files/ENCFF104LFN/@@download/ENCFF104LFN.bigWig hg19 released low read depth, antibody characterized with exemption missing control alignments ENCFF435QEE bigWig signal p-value ENCSR038RGL ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM7-human ENCAB658SAJ DNA False 2016-10-31 ENCODE 1, 2 ENCFF051LWI, ENCFF366IHT, ENCFF425DVG, ENCFF581ZJL 1770219809 ENCODE Processing Pipeline 0bdf5035c7539bdfc016d1d24a6e1434 https://www.encodeproject.org/files/ENCFF435QEE/@@download/ENCFF435QEE.bigWig hg19 released low read depth, antibody characterized with exemption missing control alignments ENCFF817HCH bigWig fold change over control ENCSR038RGL ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM7-human ENCAB658SAJ DNA False 2016-10-31 ENCODE 1, 2 ENCFF051LWI, ENCFF366IHT, ENCFF425DVG, ENCFF581ZJL 2042447361 ENCODE Processing Pipeline 329047470559835194e70fecc0127c16 https://www.encodeproject.org/files/ENCFF817HCH/@@download/ENCFF817HCH.bigWig hg19 released low read depth, antibody characterized with exemption missing control alignments ENCFF608HDL bigWig fold change over control ENCSR038RGL ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM7-human ENCAB658SAJ DNA False 2016-10-31 ENCODE 1 ENCFF425DVG, ENCFF581ZJL 1097179627 ENCODE Processing Pipeline 32ece8524c6c0bb727390bccf995cb94 https://www.encodeproject.org/files/ENCFF608HDL/@@download/ENCFF608HDL.bigWig hg19 released low read depth, antibody characterized with exemption missing control alignments ENCFF384WLM bigWig fold change over control ENCSR038RGL ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM7-human ENCAB658SAJ DNA False 2016-10-31 ENCODE 2 ENCFF051LWI, ENCFF366IHT 1091022491 ENCODE Processing Pipeline 8f244de05663cd0819f2bf35084c0e15 https://www.encodeproject.org/files/ENCFF384WLM/@@download/ENCFF384WLM.bigWig hg19 released low read depth, antibody characterized with exemption missing control alignments ENCFF286BGV bed narrowPeak peaks ENCSR038RGL ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM7-human ENCAB658SAJ DNA False 2016-10-31 ENCODE 1 ENCFF425DVG, ENCFF581ZJL 6176129 ENCODE Processing Pipeline c9a3e2a7d340aab9c112f48ab6fb8c0c https://www.encodeproject.org/files/ENCFF286BGV/@@download/ENCFF286BGV.bed.gz hg19 released low read depth, antibody characterized with exemption missing control alignments ENCFF191CDX bed narrowPeak peaks ENCSR038RGL ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM7-human ENCAB658SAJ DNA False 2016-10-31 ENCODE 1, 2 ENCFF051LWI, ENCFF366IHT, ENCFF425DVG, ENCFF581ZJL 7039698 ENCODE Processing Pipeline 40bc967ea9077eb3884225f23973c5b5 https://www.encodeproject.org/files/ENCFF191CDX/@@download/ENCFF191CDX.bed.gz hg19 released low read depth, antibody characterized with exemption missing control alignments ENCFF010VLV bed narrowPeak peaks ENCSR038RGL ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM7-human ENCAB658SAJ DNA False 2016-10-31 ENCODE 2 ENCFF051LWI, ENCFF366IHT 6282170 ENCODE Processing Pipeline eafd607c9835055ae6d129e2c51038f4 https://www.encodeproject.org/files/ENCFF010VLV/@@download/ENCFF010VLV.bed.gz hg19 released low read depth, antibody characterized with exemption missing control alignments ENCFF676HMW bigBed narrowPeak peaks ENCSR038RGL ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM7-human ENCAB658SAJ DNA False 2016-10-31 ENCODE 1 ENCFF286BGV 11188467 ENCODE Processing Pipeline d8832864235493730c72a1b8fa5e9c4b https://www.encodeproject.org/files/ENCFF676HMW/@@download/ENCFF676HMW.bigBed hg19 released low read depth, antibody characterized with exemption missing control alignments ENCFF045OVI bigBed narrowPeak peaks ENCSR038RGL ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM7-human ENCAB658SAJ DNA False 2016-10-31 ENCODE 1, 2 ENCFF191CDX 11015005 ENCODE Processing Pipeline d568ad49bcc7dd88ccba3a9e8a5ff87c https://www.encodeproject.org/files/ENCFF045OVI/@@download/ENCFF045OVI.bigBed hg19 released low read depth, antibody characterized with exemption missing control alignments ENCFF917WXR bigBed narrowPeak peaks ENCSR038RGL ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM7-human ENCAB658SAJ DNA False 2016-10-31 ENCODE 2 ENCFF010VLV 11093196 ENCODE Processing Pipeline aec4fe5a1416b200f3ba4a9e8a18b9e0 https://www.encodeproject.org/files/ENCFF917WXR/@@download/ENCFF917WXR.bigBed hg19 released low read depth, antibody characterized with exemption missing control alignments ENCFF845CXJ bed narrowPeak conservative idr thresholded peaks ENCSR038RGL ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM7-human ENCAB658SAJ DNA False 2016-10-31 ENCODE 1, 2 ENCFF001TDO, ENCFF010VLV, ENCFF191CDX, ENCFF286BGV 35858 ENCODE Processing Pipeline dd7220fae12206cce889215ed857d759 https://www.encodeproject.org/files/ENCFF845CXJ/@@download/ENCFF845CXJ.bed.gz hg19 released low read depth, antibody characterized with exemption missing control alignments ENCFF952UUZ bigBed narrowPeak conservative idr thresholded peaks ENCSR038RGL ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM7-human ENCAB658SAJ DNA False 2016-10-31 ENCODE 1, 2 ENCFF845CXJ 115671 ENCODE Processing Pipeline 6c7fb1586836e1a70e910c20dd733d4e https://www.encodeproject.org/files/ENCFF952UUZ/@@download/ENCFF952UUZ.bigBed hg19 released low read depth, antibody characterized with exemption missing control alignments ENCFF399GAE bed narrowPeak optimal idr thresholded peaks ENCSR038RGL ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM7-human ENCAB658SAJ DNA False 2016-10-31 ENCODE 1, 2 ENCFF001TDO, ENCFF010VLV, ENCFF191CDX, ENCFF286BGV 48865 ENCODE Processing Pipeline b4f54e4c49a4190a7b2f6cf67ec4bb84 https://www.encodeproject.org/files/ENCFF399GAE/@@download/ENCFF399GAE.bed.gz hg19 released low read depth, antibody characterized with exemption missing control alignments ENCFF462YOF bigBed narrowPeak optimal idr thresholded peaks ENCSR038RGL ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM7-human ENCAB658SAJ DNA False 2016-10-31 ENCODE 1, 2 ENCFF399GAE 134538 ENCODE Processing Pipeline d62481716ec15c1036e7e0cdc51a93d1 https://www.encodeproject.org/files/ENCFF462YOF/@@download/ENCFF462YOF.bigBed hg19 released low read depth, antibody characterized with exemption missing control alignments ENCFF341WCH bam unfiltered alignments ENCSR038RGL ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM7-human ENCAB658SAJ DNA False 2016-10-31 ENCODE 2 100 ENCFF224YLQ, ENCFF643CGH, ENCFF736AVM 4722150720 ENCODE Processing Pipeline 618d6d59fe0951cc9efd4ff19961a9e5 https://www.encodeproject.org/files/ENCFF341WCH/@@download/ENCFF341WCH.bam GRCh38 released low read depth, antibody characterized with exemption missing control alignments ENCFF153NPR bam unfiltered alignments ENCSR038RGL ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM7-human ENCAB658SAJ DNA False 2016-10-31 ENCODE 1 100 ENCFF643CGH, ENCFF712YHQ, ENCFF764UGY 4391066176 ENCODE Processing Pipeline 85fd41ab23b7dd416457ecdc3d070b92 https://www.encodeproject.org/files/ENCFF153NPR/@@download/ENCFF153NPR.bam GRCh38 released low read depth, antibody characterized with exemption missing control alignments ENCFF245YPG bam alignments ENCSR038RGL ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM7-human ENCAB658SAJ DNA False 2016-10-31 ENCODE 2 100 ENCFF224YLQ, ENCFF643CGH, ENCFF736AVM 4024874756 ENCODE Processing Pipeline 3e73b997072745f9a29c0dfa85d68680 https://www.encodeproject.org/files/ENCFF245YPG/@@download/ENCFF245YPG.bam GRCh38 released low read depth, antibody characterized with exemption missing control alignments ENCFF980TTL bam alignments ENCSR038RGL ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM7-human ENCAB658SAJ DNA False 2016-10-31 ENCODE 1 100 ENCFF643CGH, ENCFF712YHQ, ENCFF764UGY 3701706821 ENCODE Processing Pipeline 7168cb9b915287653bef82bb21f2c774 https://www.encodeproject.org/files/ENCFF980TTL/@@download/ENCFF980TTL.bam GRCh38 released low read depth, antibody characterized with exemption missing control alignments ENCFF798SBK bigWig signal p-value ENCSR038RGL ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM7-human ENCAB658SAJ DNA False 2016-10-31 ENCODE 1 ENCFF980TTL 1130413037 ENCODE Processing Pipeline e22116adfd9ef667882a1406006caefa https://www.encodeproject.org/files/ENCFF798SBK/@@download/ENCFF798SBK.bigWig GRCh38 released low read depth, antibody characterized with exemption missing control alignments ENCFF120YIH bigWig signal p-value ENCSR038RGL ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM7-human ENCAB658SAJ DNA False 2016-10-31 ENCODE 2 ENCFF245YPG 954042474 ENCODE Processing Pipeline b3c1a7a19c915d5d819cf496311e8cb3 https://www.encodeproject.org/files/ENCFF120YIH/@@download/ENCFF120YIH.bigWig GRCh38 released low read depth, antibody characterized with exemption missing control alignments ENCFF977FPJ bigWig signal p-value ENCSR038RGL ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM7-human ENCAB658SAJ DNA False 2016-10-31 ENCODE 1, 2 ENCFF245YPG, ENCFF980TTL 1593786896 ENCODE Processing Pipeline 63172cbaa6ad843aa597e6e8defe2c06 https://www.encodeproject.org/files/ENCFF977FPJ/@@download/ENCFF977FPJ.bigWig GRCh38 released low read depth, antibody characterized with exemption missing control alignments ENCFF613LUS bigWig fold change over control ENCSR038RGL ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM7-human ENCAB658SAJ DNA False 2016-10-31 ENCODE 1 ENCFF980TTL 1101292670 ENCODE Processing Pipeline 3d4ebf6f7cd28783be3a916f1177f49e https://www.encodeproject.org/files/ENCFF613LUS/@@download/ENCFF613LUS.bigWig GRCh38 released low read depth, antibody characterized with exemption missing control alignments ENCFF951BXB bigWig fold change over control ENCSR038RGL ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM7-human ENCAB658SAJ DNA False 2016-10-31 ENCODE 2 ENCFF245YPG 1090768200 ENCODE Processing Pipeline 974377b02e22fc4f0eb4d1c80cf6c984 https://www.encodeproject.org/files/ENCFF951BXB/@@download/ENCFF951BXB.bigWig GRCh38 released low read depth, antibody characterized with exemption missing control alignments ENCFF770CZV bigWig fold change over control ENCSR038RGL ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM7-human ENCAB658SAJ DNA False 2016-10-31 ENCODE 1, 2 ENCFF245YPG, ENCFF980TTL 2030573109 ENCODE Processing Pipeline c4058bd1d240092b676e5697bbc56a66 https://www.encodeproject.org/files/ENCFF770CZV/@@download/ENCFF770CZV.bigWig GRCh38 released low read depth, antibody characterized with exemption missing control alignments ENCFF380JJE bed narrowPeak peaks ENCSR038RGL ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM7-human ENCAB658SAJ DNA False 2016-10-31 ENCODE 1 ENCFF980TTL 6022156 ENCODE Processing Pipeline a26fae2825e5a0bc9477bd97f9d5d85d https://www.encodeproject.org/files/ENCFF380JJE/@@download/ENCFF380JJE.bed.gz GRCh38 released low read depth, antibody characterized with exemption missing control alignments ENCFF990OKM bed narrowPeak peaks ENCSR038RGL ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM7-human ENCAB658SAJ DNA False 2016-10-31 ENCODE 2 ENCFF245YPG 6094093 ENCODE Processing Pipeline 1424c40fecd54cff0924886f8364e5a0 https://www.encodeproject.org/files/ENCFF990OKM/@@download/ENCFF990OKM.bed.gz GRCh38 released low read depth, antibody characterized with exemption missing control alignments ENCFF743YDQ bed narrowPeak peaks ENCSR038RGL ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM7-human ENCAB658SAJ DNA False 2016-10-31 ENCODE 1, 2 ENCFF245YPG, ENCFF980TTL 6981108 ENCODE Processing Pipeline 2c305fef9fd359fe98355ef6b71b4bea https://www.encodeproject.org/files/ENCFF743YDQ/@@download/ENCFF743YDQ.bed.gz GRCh38 released low read depth, antibody characterized with exemption missing control alignments ENCFF157SAV bigBed narrowPeak peaks ENCSR038RGL ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM7-human ENCAB658SAJ DNA False 2016-10-31 ENCODE 1 ENCFF380JJE 11207845 ENCODE Processing Pipeline 7f316438324b32c4d1d21451fee1a340 https://www.encodeproject.org/files/ENCFF157SAV/@@download/ENCFF157SAV.bigBed GRCh38 released low read depth, antibody characterized with exemption missing control alignments ENCFF822DNT bigBed narrowPeak peaks ENCSR038RGL ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM7-human ENCAB658SAJ DNA False 2016-10-31 ENCODE 2 ENCFF990OKM 11093398 ENCODE Processing Pipeline 110d08906a0d9226bc433d4d8c18e77b https://www.encodeproject.org/files/ENCFF822DNT/@@download/ENCFF822DNT.bigBed GRCh38 released low read depth, antibody characterized with exemption missing control alignments ENCFF946NUT bigBed narrowPeak peaks ENCSR038RGL ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM7-human ENCAB658SAJ DNA False 2016-10-31 ENCODE 1, 2 ENCFF743YDQ 11027098 ENCODE Processing Pipeline 46dd8d3d43a70201c3dcf5a2cbc7858d https://www.encodeproject.org/files/ENCFF946NUT/@@download/ENCFF946NUT.bigBed GRCh38 released low read depth, antibody characterized with exemption missing control alignments ENCFF777MDP bed narrowPeak conservative idr thresholded peaks ENCSR038RGL ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM7-human ENCAB658SAJ DNA False 2016-10-31 ENCODE 1, 2 ENCFF380JJE, ENCFF419RSJ, ENCFF743YDQ, ENCFF990OKM 35841 ENCODE Processing Pipeline cb5fab9683426991b76e6b7ab06a4c8f https://www.encodeproject.org/files/ENCFF777MDP/@@download/ENCFF777MDP.bed.gz GRCh38 released low read depth, antibody characterized with exemption missing control alignments ENCFF638DSI bigBed narrowPeak conservative idr thresholded peaks ENCSR038RGL ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM7-human ENCAB658SAJ DNA False 2016-10-31 ENCODE 1, 2 ENCFF777MDP 117923 ENCODE Processing Pipeline aa1938775c0aacbe229bc88c2babddf8 https://www.encodeproject.org/files/ENCFF638DSI/@@download/ENCFF638DSI.bigBed GRCh38 released low read depth, antibody characterized with exemption missing control alignments ENCFF159MQI bed narrowPeak optimal idr thresholded peaks ENCSR038RGL ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM7-human ENCAB658SAJ DNA False 2016-10-31 ENCODE 1, 2 ENCFF380JJE, ENCFF419RSJ, ENCFF743YDQ, ENCFF990OKM 48563 ENCODE Processing Pipeline 552dcc1a4366dc2b4561aef2a19e6fbc https://www.encodeproject.org/files/ENCFF159MQI/@@download/ENCFF159MQI.bed.gz GRCh38 released low read depth, antibody characterized with exemption missing control alignments ENCFF924ZJX bigBed narrowPeak optimal idr thresholded peaks ENCSR038RGL ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM7-human ENCAB658SAJ DNA False 2016-10-31 ENCODE 1, 2 ENCFF159MQI 136419 ENCODE Processing Pipeline 67718945b82efa070a5441ec5389cfa5 https://www.encodeproject.org/files/ENCFF924ZJX/@@download/ENCFF924ZJX.bigBed GRCh38 released low read depth, antibody characterized with exemption missing control alignments ENCFF571RCF bam unfiltered alignments ENCSR737UST ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF740-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 50 ENCFF076JZZ, ENCFF717YOH, ENCFF807MUK 1660634904 ENCODE Processing Pipeline e0bbed42bfde368421d0b6abf87ca884 https://www.encodeproject.org/files/ENCFF571RCF/@@download/ENCFF571RCF.bam hg19 released missing genetic modification characterization ENCFF750RZH bam unfiltered alignments ENCSR737UST ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF740-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 50 ENCFF019ZET, ENCFF748PBU, ENCFF807MUK 1176312851 ENCODE Processing Pipeline b1fe5e2109234d81cc69381b310a1ad5 https://www.encodeproject.org/files/ENCFF750RZH/@@download/ENCFF750RZH.bam hg19 released missing genetic modification characterization ENCFF748PBU fastq reads ENCSR737UST ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF740-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 1 50 single-ended 417614987 Kevin White, UChicago a03611adbe6e8b71102ab887e314dc89 SRA:SRR6214111 https://www.encodeproject.org/files/ENCFF748PBU/@@download/ENCFF748PBU.fastq.gz Illumina HiSeq 2000 /files/ENCFF485ZYJ/, /files/ENCFF679OFG/ released missing genetic modification characterization ENCFF717YOH fastq reads ENCSR737UST ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF740-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 1 50 single-ended 606808091 Kevin White, UChicago 7dfc200f365e77d994571a05d3d7e258 SRA:SRR6214109 https://www.encodeproject.org/files/ENCFF717YOH/@@download/ENCFF717YOH.fastq.gz Illumina HiSeq 2000 /files/ENCFF485ZYJ/, /files/ENCFF679OFG/ released missing genetic modification characterization ENCFF076JZZ fastq reads ENCSR737UST ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF740-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 1 50 single-ended 898735862 Kevin White, UChicago 32f8f9ee98fdc90f587bfd1df57ff8c6 SRA:SRR6214110 https://www.encodeproject.org/files/ENCFF076JZZ/@@download/ENCFF076JZZ.fastq.gz Illumina HiSeq 2500 /files/ENCFF485ZYJ/, /files/ENCFF679OFG/ released missing genetic modification characterization ENCFF019ZET fastq reads ENCSR737UST ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF740-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 1 50 single-ended 643514711 Kevin White, UChicago 576b781012028748726e4d3a55bd4a8b SRA:SRR6214112 https://www.encodeproject.org/files/ENCFF019ZET/@@download/ENCFF019ZET.fastq.gz Illumina HiSeq 2500 /files/ENCFF485ZYJ/, /files/ENCFF679OFG/ released missing genetic modification characterization ENCFF356LRY bam alignments ENCSR737UST ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF740-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 50 ENCFF076JZZ, ENCFF717YOH, ENCFF807MUK 1322244002 ENCODE Processing Pipeline b756590c127e1c790ba9201e2e4f294a https://www.encodeproject.org/files/ENCFF356LRY/@@download/ENCFF356LRY.bam hg19 released missing genetic modification characterization ENCFF284BJY bam alignments ENCSR737UST ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF740-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 50 ENCFF019ZET, ENCFF748PBU, ENCFF807MUK 934467817 ENCODE Processing Pipeline 05cbf4958b1a804f78bdcf74bb33d070 https://www.encodeproject.org/files/ENCFF284BJY/@@download/ENCFF284BJY.bam hg19 released missing genetic modification characterization ENCFF952IWN bigWig signal p-value ENCSR737UST ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF740-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF139MVO, ENCFF284BJY 691843205 ENCODE Processing Pipeline a45977a3edfdea9eb50a113d29cf3645 https://www.encodeproject.org/files/ENCFF952IWN/@@download/ENCFF952IWN.bigWig hg19 released missing genetic modification characterization ENCFF855HVC bigWig signal p-value ENCSR737UST ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF740-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF139MVO, ENCFF356LRY 691020411 ENCODE Processing Pipeline ad6036c0919e98067f3c6b866a98e2d8 https://www.encodeproject.org/files/ENCFF855HVC/@@download/ENCFF855HVC.bigWig hg19 released missing genetic modification characterization ENCFF696IQC bigWig signal p-value ENCSR737UST ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF740-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF139MVO, ENCFF284BJY, ENCFF356LRY 953627406 ENCODE Processing Pipeline 48af401d4073821ae45a233ae9289df4 https://www.encodeproject.org/files/ENCFF696IQC/@@download/ENCFF696IQC.bigWig hg19 released missing genetic modification characterization ENCFF611SXM bigWig fold change over control ENCSR737UST ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF740-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF139MVO, ENCFF284BJY 594583195 ENCODE Processing Pipeline 88aca38ea7b19b30fc1ed77c83aa2878 https://www.encodeproject.org/files/ENCFF611SXM/@@download/ENCFF611SXM.bigWig hg19 released missing genetic modification characterization ENCFF984LVW bigWig fold change over control ENCSR737UST ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF740-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF139MVO, ENCFF356LRY 733369353 ENCODE Processing Pipeline 979b864879a485d1ab6680dd7bed5107 https://www.encodeproject.org/files/ENCFF984LVW/@@download/ENCFF984LVW.bigWig hg19 released missing genetic modification characterization ENCFF621LZE bigWig fold change over control ENCSR737UST ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF740-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF139MVO, ENCFF284BJY, ENCFF356LRY 1019393271 ENCODE Processing Pipeline 2a11a9b28f6b35644ff9c2fa8ca7fe3f https://www.encodeproject.org/files/ENCFF621LZE/@@download/ENCFF621LZE.bigWig hg19 released missing genetic modification characterization ENCFF903FBL bed narrowPeak peaks ENCSR737UST ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF740-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF139MVO, ENCFF284BJY, ENCFF356LRY 7079020 ENCODE Processing Pipeline 5adc0944ca4d0fb5a20e8c6463262515 https://www.encodeproject.org/files/ENCFF903FBL/@@download/ENCFF903FBL.bed.gz hg19 released missing genetic modification characterization ENCFF233FOV bed narrowPeak peaks ENCSR737UST ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF740-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF139MVO, ENCFF284BJY 6429901 ENCODE Processing Pipeline 17babe61f65b3c87ed973fd946ef985d https://www.encodeproject.org/files/ENCFF233FOV/@@download/ENCFF233FOV.bed.gz hg19 released missing genetic modification characterization ENCFF188UYW bed narrowPeak peaks ENCSR737UST ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF740-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF139MVO, ENCFF356LRY 6563813 ENCODE Processing Pipeline 152f4cc7ab9826b2bd18f6611a240141 https://www.encodeproject.org/files/ENCFF188UYW/@@download/ENCFF188UYW.bed.gz hg19 released missing genetic modification characterization ENCFF150LYY bigBed narrowPeak peaks ENCSR737UST ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF740-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF233FOV 13146915 ENCODE Processing Pipeline 1bcf8747463f5a11a31c3a88544c8213 https://www.encodeproject.org/files/ENCFF150LYY/@@download/ENCFF150LYY.bigBed hg19 released missing genetic modification characterization ENCFF191COH bigBed narrowPeak peaks ENCSR737UST ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF740-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF188UYW 13262167 ENCODE Processing Pipeline ac75d18f7ed4bf851b3982bdb5576ffd https://www.encodeproject.org/files/ENCFF191COH/@@download/ENCFF191COH.bigBed hg19 released missing genetic modification characterization ENCFF180UUQ bigBed narrowPeak peaks ENCSR737UST ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF740-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF903FBL 13160410 ENCODE Processing Pipeline 8dbd858997fe99b6937eb233bbdd1c04 https://www.encodeproject.org/files/ENCFF180UUQ/@@download/ENCFF180UUQ.bigBed hg19 released missing genetic modification characterization ENCFF802MSR bam unfiltered alignments ENCSR737UST ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF740-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 50 ENCFF019ZET, ENCFF643CGH, ENCFF748PBU 1180604893 ENCODE Processing Pipeline f75263b2ce29c0e081d3232307e86317 https://www.encodeproject.org/files/ENCFF802MSR/@@download/ENCFF802MSR.bam GRCh38 released missing genetic modification characterization ENCFF698BAV bam unfiltered alignments ENCSR737UST ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF740-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 50 ENCFF076JZZ, ENCFF643CGH, ENCFF717YOH 1666992494 ENCODE Processing Pipeline ce4fd9e7a612c22ac296bcaab6864a82 https://www.encodeproject.org/files/ENCFF698BAV/@@download/ENCFF698BAV.bam GRCh38 released missing genetic modification characterization ENCFF910XWG bam alignments ENCSR737UST ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF740-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 50 ENCFF019ZET, ENCFF643CGH, ENCFF748PBU 934006226 ENCODE Processing Pipeline 63c6ba7d00322521c73826c117813f9a https://www.encodeproject.org/files/ENCFF910XWG/@@download/ENCFF910XWG.bam GRCh38 released missing genetic modification characterization ENCFF338MSY bam alignments ENCSR737UST ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF740-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 50 ENCFF076JZZ, ENCFF643CGH, ENCFF717YOH 1321747395 ENCODE Processing Pipeline 5adc37cd22a3fc0802cc09be03eac88a https://www.encodeproject.org/files/ENCFF338MSY/@@download/ENCFF338MSY.bam GRCh38 released missing genetic modification characterization ENCFF916DNT bigWig signal p-value ENCSR737UST ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF740-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF338MSY, ENCFF679QYP, ENCFF910XWG 958356471 ENCODE Processing Pipeline 08841bd787508e99b48d4cf27eda1c71 https://www.encodeproject.org/files/ENCFF916DNT/@@download/ENCFF916DNT.bigWig GRCh38 released missing genetic modification characterization ENCFF536STK bigWig signal p-value ENCSR737UST ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF740-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF679QYP, ENCFF910XWG 636077449 ENCODE Processing Pipeline 8b56aba495e3376f768ca14142a8d379 https://www.encodeproject.org/files/ENCFF536STK/@@download/ENCFF536STK.bigWig GRCh38 released missing genetic modification characterization ENCFF362FYD bigWig signal p-value ENCSR737UST ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF740-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF338MSY, ENCFF679QYP 819656387 ENCODE Processing Pipeline 57e631dd9f3428a874ecf3bf0f6fe97c https://www.encodeproject.org/files/ENCFF362FYD/@@download/ENCFF362FYD.bigWig GRCh38 released missing genetic modification characterization ENCFF327UMS bigWig fold change over control ENCSR737UST ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF740-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF679QYP, ENCFF910XWG 594918502 ENCODE Processing Pipeline 90915ac5a28a7407f48359a5d8ff2491 https://www.encodeproject.org/files/ENCFF327UMS/@@download/ENCFF327UMS.bigWig GRCh38 released missing genetic modification characterization ENCFF074TUY bigWig fold change over control ENCSR737UST ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF740-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF338MSY, ENCFF679QYP 719037437 ENCODE Processing Pipeline cadc41b3c60d9fe0f8b793e06ec42519 https://www.encodeproject.org/files/ENCFF074TUY/@@download/ENCFF074TUY.bigWig GRCh38 released missing genetic modification characterization ENCFF415NMY bigWig fold change over control ENCSR737UST ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF740-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF338MSY, ENCFF679QYP, ENCFF910XWG 1043444283 ENCODE Processing Pipeline a00f72ec6c5a86976ffa71957f9f2942 https://www.encodeproject.org/files/ENCFF415NMY/@@download/ENCFF415NMY.bigWig GRCh38 released missing genetic modification characterization ENCFF955QYT bed narrowPeak peaks ENCSR737UST ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF740-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF338MSY, ENCFF679QYP 6308309 ENCODE Processing Pipeline c8db82c453a30d55f593fb78cda1394b https://www.encodeproject.org/files/ENCFF955QYT/@@download/ENCFF955QYT.bed.gz GRCh38 released missing genetic modification characterization ENCFF327IQQ bigBed narrowPeak peaks ENCSR737UST ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF740-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF955QYT 13271535 ENCODE Processing Pipeline 05868d5c008b79d8c6afa63aa67b6423 https://www.encodeproject.org/files/ENCFF327IQQ/@@download/ENCFF327IQQ.bigBed GRCh38 released missing genetic modification characterization ENCFF106DEP bed narrowPeak peaks ENCSR737UST ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF740-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF338MSY, ENCFF679QYP, ENCFF910XWG 6927149 ENCODE Processing Pipeline 3f5756c8c7486322b5d5b7c5ac9f24d5 https://www.encodeproject.org/files/ENCFF106DEP/@@download/ENCFF106DEP.bed.gz GRCh38 released missing genetic modification characterization ENCFF018SYW bed narrowPeak peaks ENCSR737UST ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF740-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF679QYP, ENCFF910XWG 6237873 ENCODE Processing Pipeline c2d4bae5eb21f133e94200a351d4fd6e https://www.encodeproject.org/files/ENCFF018SYW/@@download/ENCFF018SYW.bed.gz GRCh38 released missing genetic modification characterization ENCFF096SML bigBed narrowPeak peaks ENCSR737UST ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF740-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF106DEP 13169338 ENCODE Processing Pipeline 4ee5bfe0bab4395c0ea120de88b1065d https://www.encodeproject.org/files/ENCFF096SML/@@download/ENCFF096SML.bigBed GRCh38 released missing genetic modification characterization ENCFF559RZI bigBed narrowPeak peaks ENCSR737UST ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF740-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF018SYW 13146649 ENCODE Processing Pipeline 535149d810673eb030c0965d5af7d9a1 https://www.encodeproject.org/files/ENCFF559RZI/@@download/ENCFF559RZI.bigBed GRCh38 released missing genetic modification characterization ENCFF161ZTQ bigBed narrowPeak optimal idr thresholded peaks ENCSR737UST ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF740-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF301FKQ 362524 ENCODE Processing Pipeline b796fb81ca1b9c92f5b1ed5400a9564e https://www.encodeproject.org/files/ENCFF161ZTQ/@@download/ENCFF161ZTQ.bigBed GRCh38 released missing genetic modification characterization ENCFF301FKQ bed narrowPeak optimal idr thresholded peaks ENCSR737UST ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF740-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF018SYW, ENCFF106DEP, ENCFF419RSJ, ENCFF955QYT 149072 ENCODE Processing Pipeline bb60d5ef02304ef3e26cf1135dd4057c https://www.encodeproject.org/files/ENCFF301FKQ/@@download/ENCFF301FKQ.bed.gz GRCh38 released missing genetic modification characterization ENCFF350TYH bed narrowPeak conservative idr thresholded peaks ENCSR737UST ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF740-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF018SYW, ENCFF106DEP, ENCFF419RSJ, ENCFF955QYT 142809 ENCODE Processing Pipeline d92a22a11cd26a71da777be1ddd7815a https://www.encodeproject.org/files/ENCFF350TYH/@@download/ENCFF350TYH.bed.gz GRCh38 released missing genetic modification characterization ENCFF502MAP bigBed narrowPeak conservative idr thresholded peaks ENCSR737UST ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF740-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF350TYH 349734 ENCODE Processing Pipeline 36681244f0416ca3aa5df4500cf9811c https://www.encodeproject.org/files/ENCFF502MAP/@@download/ENCFF502MAP.bigBed GRCh38 released missing genetic modification characterization ENCFF669BPX bed narrowPeak conservative idr thresholded peaks ENCSR737UST ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF740-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF001TDO, ENCFF188UYW, ENCFF233FOV, ENCFF903FBL 117901 ENCODE Processing Pipeline dac6a1df1646df37753b3993bb9c83f3 https://www.encodeproject.org/files/ENCFF669BPX/@@download/ENCFF669BPX.bed.gz hg19 released missing genetic modification characterization ENCFF810USN bigBed narrowPeak conservative idr thresholded peaks ENCSR737UST ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF740-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF669BPX 257336 ENCODE Processing Pipeline f43e373059100002fe006c5b75d4f2c4 https://www.encodeproject.org/files/ENCFF810USN/@@download/ENCFF810USN.bigBed hg19 released missing genetic modification characterization ENCFF898FAQ bed narrowPeak optimal idr thresholded peaks ENCSR737UST ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF740-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF001TDO, ENCFF188UYW, ENCFF233FOV, ENCFF903FBL 124815 ENCODE Processing Pipeline e289ccf3c9b78c0755899343b35f0f61 https://www.encodeproject.org/files/ENCFF898FAQ/@@download/ENCFF898FAQ.bed.gz hg19 released missing genetic modification characterization ENCFF023IJE bigBed narrowPeak optimal idr thresholded peaks ENCSR737UST ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF740-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF898FAQ 267561 ENCODE Processing Pipeline 3a61fc48790f5ebaeece8f445412b7ad https://www.encodeproject.org/files/ENCFF023IJE/@@download/ENCFF023IJE.bigBed hg19 released missing genetic modification characterization ENCFF000QHX bam alignments ENCSR000BNM ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAF7-human ENCAB000ALN DNA see document see document False 2011-07-18 ENCODE 1 ENCFF000QII 784196004 Richard Myers, HAIB 8ee1e1089b166eee4c4caa9f4f2ee801 https://www.encodeproject.org/files/ENCFF000QHX/@@download/ENCFF000QHX.bam hg19 archived low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF000QHY bigBed broadPeak peaks ENCSR000BNM ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAF7-human ENCAB000ALN DNA see document see document False 2011-07-18 ENCODE 1 1 ENCFF001ULP 102111 Richard Myers, HAIB fe840ff59e043f1a7136befb624d9596 https://www.encodeproject.org/files/ENCFF000QHY/@@download/ENCFF000QHY.bigBed hg19 archived low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF000QHZ bigBed broadPeak peaks ENCSR000BNM ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAF7-human ENCAB000ALN DNA see document see document False 2011-07-18 ENCODE 2 1 ENCFF001ULQ 126693 Richard Myers, HAIB 623faee356465efa0c9a80cc5b60f4f7 https://www.encodeproject.org/files/ENCFF000QHZ/@@download/ENCFF000QHZ.bigBed hg19 archived low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF000QIA bam alignments ENCSR000BNM ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAF7-human ENCAB000ALN DNA see document see document False 2011-07-18 ENCODE 2 ENCFF000QIM 985093791 Richard Myers, HAIB fd2ca68e20ea886131dee15b5b154ac8 https://www.encodeproject.org/files/ENCFF000QIA/@@download/ENCFF000QIA.bam hg19 archived low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF000QIC bigWig raw signal ENCSR000BNM ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAF7-human ENCAB000ALN DNA see document see document False 2011-07-18 ENCODE 1 1 3764647 Richard Myers, HAIB f10540de9bb61889ffb457609cc96272 https://www.encodeproject.org/files/ENCFF000QIC/@@download/ENCFF000QIC.bigWig hg19 archived low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample, missing derived_from control insufficient read depth ENCFF000QIE bigWig raw signal ENCSR000BNM ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAF7-human ENCAB000ALN DNA see document see document False 2011-07-18 ENCODE 2 1 8907374 Richard Myers, HAIB 74a0b6c12cd8d7e56d20f12233dc999f https://www.encodeproject.org/files/ENCFF000QIE/@@download/ENCFF000QIE.bigWig hg19 archived low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample, missing derived_from control insufficient read depth ENCFF000QII fastq reads ENCSR000BNM ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAF7-human ENCAB000ALN DNA see document see document False 2011-07-18 ENCODE 1 1 36 single-ended 657079315 Richard Myers, HAIB f0a12c56bcae296ba13d617ff6c3f57f https://www.encodeproject.org/files/ENCFF000QII/@@download/ENCFF000QII.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000QEX/ released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF000QIM fastq reads ENCSR000BNM ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAF7-human ENCAB000ALN DNA see document see document False 2011-07-18 ENCODE 2 1 36 single-ended 926068600 Richard Myers, HAIB eec490d05f0fa4be5e79023129b8d259 https://www.encodeproject.org/files/ENCFF000QIM/@@download/ENCFF000QIM.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000QEX/ released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF001ULP bed broadPeak peaks ENCSR000BNM ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAF7-human ENCAB000ALN DNA see document see document False 2011-07-18 ENCODE 1 1 35779 Richard Myers, HAIB 0ac5cef0b3bc1b0497ea21e7eb8da507 https://www.encodeproject.org/files/ENCFF001ULP/@@download/ENCFF001ULP.bed.gz hg19 archived low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample, missing derived_from control insufficient read depth ENCFF001ULQ bed broadPeak peaks ENCSR000BNM ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAF7-human ENCAB000ALN DNA see document see document False 2011-07-18 ENCODE 2 1 40467 Richard Myers, HAIB f79b1ab3b2c7b388a852daf0bac68a81 https://www.encodeproject.org/files/ENCFF001ULQ/@@download/ENCFF001ULQ.bed.gz hg19 archived low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample, missing derived_from control insufficient read depth ENCFF002CMS bed narrowPeak optimal idr thresholded peaks ENCSR000BNM ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAF7-human ENCAB000ALN DNA see document see document False 2011-07-18 ENCODE 69164 ENCODE Consortium Analysis Working Group 063d398298f51274e96c4d9e0cb76741 https://www.encodeproject.org/files/ENCFF002CMS/@@download/ENCFF002CMS.bed.gz hg19 archived low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample, missing derived_from control insufficient read depth ENCFF006OCC bigBed narrowPeak optimal idr thresholded peaks ENCSR000BNM ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAF7-human ENCAB000ALN DNA see document see document False 2011-07-18 ENCODE ENCFF002CMS 198350 ENCODE Consortium 6c6069949d1fd30f5fc9130f97042545 https://www.encodeproject.org/files/ENCFF006OCC/@@download/ENCFF006OCC.bigBed hg19 archived low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF684LYI bam unfiltered alignments ENCSR000BNM ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAF7-human ENCAB000ALN DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000QII, ENCFF643CGH 925082323 ENCODE Processing Pipeline b6a62fbb9d2956754e7d4b35a4cd0296 https://www.encodeproject.org/files/ENCFF684LYI/@@download/ENCFF684LYI.bam GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF518PIS bam alignments ENCSR000BNM ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAF7-human ENCAB000ALN DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000QII, ENCFF643CGH 545582575 ENCODE Processing Pipeline 2d134746c5a0b5a77cf3d00ba3817c07 https://www.encodeproject.org/files/ENCFF518PIS/@@download/ENCFF518PIS.bam GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF940IQI bam unfiltered alignments ENCSR000BNM ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAF7-human ENCAB000ALN DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000QIM, ENCFF643CGH 1177649527 ENCODE Processing Pipeline 57e73a00cab1e00a6dc014e4cbe6cd4c https://www.encodeproject.org/files/ENCFF940IQI/@@download/ENCFF940IQI.bam GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF126SXE bam alignments ENCSR000BNM ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAF7-human ENCAB000ALN DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000QIM, ENCFF643CGH 629717843 ENCODE Processing Pipeline 8edbd9669942b239360d400c23a0cdc8 https://www.encodeproject.org/files/ENCFF126SXE/@@download/ENCFF126SXE.bam GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF527PHQ bam unfiltered alignments ENCSR000BNM ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAF7-human ENCAB000ALN DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000QII, ENCFF807MUK 921657949 ENCODE Processing Pipeline f7a9c1a72685c60f5ca0530b26c78aa0 https://www.encodeproject.org/files/ENCFF527PHQ/@@download/ENCFF527PHQ.bam hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF335FQW bam alignments ENCSR000BNM ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAF7-human ENCAB000ALN DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000QII, ENCFF807MUK 545875538 ENCODE Processing Pipeline 55dc39b0bbcbe3470fd74f804c0d4ebf https://www.encodeproject.org/files/ENCFF335FQW/@@download/ENCFF335FQW.bam hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF453XQE bam unfiltered alignments ENCSR000BNM ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAF7-human ENCAB000ALN DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000QIM, ENCFF807MUK 1175076985 ENCODE Processing Pipeline c72383f26011dab6e654a878e91cf0f1 https://www.encodeproject.org/files/ENCFF453XQE/@@download/ENCFF453XQE.bam hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF085YNW bam alignments ENCSR000BNM ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAF7-human ENCAB000ALN DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000QIM, ENCFF807MUK 630052343 ENCODE Processing Pipeline f06dd42b3dc1e5eaf00ca6d758a40b06 https://www.encodeproject.org/files/ENCFF085YNW/@@download/ENCFF085YNW.bam hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF608BKQ bigWig signal p-value ENCSR000BNM ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAF7-human ENCAB000ALN DNA see document see document False 2011-07-18 ENCODE 1 ENCFF518PIS, ENCFF772PJM 200157997 ENCODE Processing Pipeline ced1cfbbf233eedcd68ce68267a54dbb https://www.encodeproject.org/files/ENCFF608BKQ/@@download/ENCFF608BKQ.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF162CVB bigWig signal p-value ENCSR000BNM ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAF7-human ENCAB000ALN DNA see document see document False 2011-07-18 ENCODE 2 ENCFF126SXE, ENCFF772PJM 209509737 ENCODE Processing Pipeline 5fc8930b89d0c3b839a7dbaa2f0d1d74 https://www.encodeproject.org/files/ENCFF162CVB/@@download/ENCFF162CVB.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF160QUN bigWig signal p-value ENCSR000BNM ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAF7-human ENCAB000ALN DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF126SXE, ENCFF518PIS, ENCFF772PJM 182168595 ENCODE Processing Pipeline 6f1252f25be6bbb581074273629962f5 https://www.encodeproject.org/files/ENCFF160QUN/@@download/ENCFF160QUN.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF355WZJ bigWig fold change over control ENCSR000BNM ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAF7-human ENCAB000ALN DNA see document see document False 2011-07-18 ENCODE 1 ENCFF518PIS, ENCFF772PJM 205610490 ENCODE Processing Pipeline 5eb20d1eee0d03a4098b2698e27dac05 https://www.encodeproject.org/files/ENCFF355WZJ/@@download/ENCFF355WZJ.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF495MIW bigWig fold change over control ENCSR000BNM ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAF7-human ENCAB000ALN DNA see document see document False 2011-07-18 ENCODE 2 ENCFF126SXE, ENCFF772PJM 227130040 ENCODE Processing Pipeline f14f090a030bf8efcaf013913752a917 https://www.encodeproject.org/files/ENCFF495MIW/@@download/ENCFF495MIW.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF665COJ bigWig fold change over control ENCSR000BNM ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAF7-human ENCAB000ALN DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF126SXE, ENCFF518PIS, ENCFF772PJM 387352882 ENCODE Processing Pipeline c2c86ab59e43296e9027ff6fd11f2b17 https://www.encodeproject.org/files/ENCFF665COJ/@@download/ENCFF665COJ.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF885BXV bed narrowPeak peaks ENCSR000BNM ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAF7-human ENCAB000ALN DNA see document see document False 2011-07-18 ENCODE 1 ENCFF518PIS, ENCFF772PJM 94123 ENCODE Processing Pipeline a6e58c04c994e4fa23083b2996b36cf5 https://www.encodeproject.org/files/ENCFF885BXV/@@download/ENCFF885BXV.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF020JUH bed narrowPeak peaks ENCSR000BNM ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAF7-human ENCAB000ALN DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF126SXE, ENCFF518PIS, ENCFF772PJM 4746793 ENCODE Processing Pipeline dab4aba425eb3588b6db87887ad52b48 https://www.encodeproject.org/files/ENCFF020JUH/@@download/ENCFF020JUH.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF824FNL bed narrowPeak peaks ENCSR000BNM ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAF7-human ENCAB000ALN DNA see document see document False 2011-07-18 ENCODE 2 ENCFF126SXE, ENCFF772PJM 197835 ENCODE Processing Pipeline 434c8469eefddfabcf849756288c9859 https://www.encodeproject.org/files/ENCFF824FNL/@@download/ENCFF824FNL.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF869EMY bigBed narrowPeak peaks ENCSR000BNM ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAF7-human ENCAB000ALN DNA see document see document False 2011-07-18 ENCODE 1 ENCFF885BXV 271249 ENCODE Processing Pipeline 2f901584cdc688c9379a9bb9d906d548 https://www.encodeproject.org/files/ENCFF869EMY/@@download/ENCFF869EMY.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF495GWA bigBed narrowPeak peaks ENCSR000BNM ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAF7-human ENCAB000ALN DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF020JUH 10704572 ENCODE Processing Pipeline a726e01de63cb232f92337ad81615f1d https://www.encodeproject.org/files/ENCFF495GWA/@@download/ENCFF495GWA.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF270QLC bed narrowPeak conservative idr thresholded peaks ENCSR000BNM ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAF7-human ENCAB000ALN DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF020JUH, ENCFF419RSJ, ENCFF824FNL, ENCFF885BXV 7565 ENCODE Processing Pipeline 3bd5df735547bfb68148701d63779b78 https://www.encodeproject.org/files/ENCFF270QLC/@@download/ENCFF270QLC.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF155JWI bigBed narrowPeak conservative idr thresholded peaks ENCSR000BNM ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAF7-human ENCAB000ALN DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF270QLC 57570 ENCODE Processing Pipeline ecc52310b5a4af1b634db4134b344a7c https://www.encodeproject.org/files/ENCFF155JWI/@@download/ENCFF155JWI.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF852NOL bed narrowPeak optimal idr thresholded peaks ENCSR000BNM ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAF7-human ENCAB000ALN DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF020JUH, ENCFF419RSJ, ENCFF824FNL, ENCFF885BXV 12435 ENCODE Processing Pipeline 5cf6d1f9a14bbdcedf73fff57d04e6fe https://www.encodeproject.org/files/ENCFF852NOL/@@download/ENCFF852NOL.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF252SVP bigBed narrowPeak peaks ENCSR000BNM ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAF7-human ENCAB000ALN DNA see document see document False 2011-07-18 ENCODE 2 ENCFF824FNL 494540 ENCODE Processing Pipeline 173506162bdbb842eaaf9157356a24c5 https://www.encodeproject.org/files/ENCFF252SVP/@@download/ENCFF252SVP.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF555GQK bigBed narrowPeak optimal idr thresholded peaks ENCSR000BNM ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAF7-human ENCAB000ALN DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF852NOL 65157 ENCODE Processing Pipeline d271b36be8da9b345b132d21d90f34ef https://www.encodeproject.org/files/ENCFF555GQK/@@download/ENCFF555GQK.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF234UNT bigWig fold change over control ENCSR000BNM ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAF7-human ENCAB000ALN DNA see document see document False 2011-07-18 ENCODE 1 ENCFF335FQW, ENCFF750MIM 205299223 ENCODE Processing Pipeline 5d539bfc8492d5a98dd1d1c946c25955 https://www.encodeproject.org/files/ENCFF234UNT/@@download/ENCFF234UNT.bigWig hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF909VNF bigWig signal p-value ENCSR000BNM ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAF7-human ENCAB000ALN DNA see document see document False 2011-07-18 ENCODE 1 ENCFF335FQW, ENCFF750MIM 200336354 ENCODE Processing Pipeline 719689b92ff0896f2efb153f5ce3b223 https://www.encodeproject.org/files/ENCFF909VNF/@@download/ENCFF909VNF.bigWig hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF733ZWY bigWig signal p-value ENCSR000BNM ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAF7-human ENCAB000ALN DNA see document see document False 2011-07-18 ENCODE 2 ENCFF085YNW, ENCFF750MIM 209692321 ENCODE Processing Pipeline 8d7b6cea72f4da348d7e2fb608ba5a33 https://www.encodeproject.org/files/ENCFF733ZWY/@@download/ENCFF733ZWY.bigWig hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF791YIP bigWig signal p-value ENCSR000BNM ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAF7-human ENCAB000ALN DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF085YNW, ENCFF335FQW, ENCFF750MIM 182120637 ENCODE Processing Pipeline d5e22f67dddc43f5394705f9265f831d https://www.encodeproject.org/files/ENCFF791YIP/@@download/ENCFF791YIP.bigWig hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF495ETG bigWig fold change over control ENCSR000BNM ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAF7-human ENCAB000ALN DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF085YNW, ENCFF335FQW, ENCFF750MIM 386872996 ENCODE Processing Pipeline d5e1c7ae8c4e65d22f2315d0509c306d https://www.encodeproject.org/files/ENCFF495ETG/@@download/ENCFF495ETG.bigWig hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF070BNL bed narrowPeak peaks ENCSR000BNM ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAF7-human ENCAB000ALN DNA see document see document False 2011-07-18 ENCODE 1 ENCFF335FQW, ENCFF750MIM 96930 ENCODE Processing Pipeline 85c6f61e40a3843197f460a194cf9805 https://www.encodeproject.org/files/ENCFF070BNL/@@download/ENCFF070BNL.bed.gz hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF443YEH bigBed narrowPeak peaks ENCSR000BNM ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAF7-human ENCAB000ALN DNA see document see document False 2011-07-18 ENCODE 2 ENCFF611EGN 496423 ENCODE Processing Pipeline 8ba6bc5f7d602290da3b220b012e0906 https://www.encodeproject.org/files/ENCFF443YEH/@@download/ENCFF443YEH.bigBed hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF473YPC bigWig fold change over control ENCSR000BNM ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAF7-human ENCAB000ALN DNA see document see document False 2011-07-18 ENCODE 2 ENCFF085YNW, ENCFF750MIM 228789166 ENCODE Processing Pipeline 18b0f50ac2797870e6408646c8941741 https://www.encodeproject.org/files/ENCFF473YPC/@@download/ENCFF473YPC.bigWig hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF611EGN bed narrowPeak peaks ENCSR000BNM ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAF7-human ENCAB000ALN DNA see document see document False 2011-07-18 ENCODE 2 ENCFF085YNW, ENCFF750MIM 199621 ENCODE Processing Pipeline 1185acb76f195bd1bc72cceeba189253 https://www.encodeproject.org/files/ENCFF611EGN/@@download/ENCFF611EGN.bed.gz hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF271GZS bed narrowPeak peaks ENCSR000BNM ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAF7-human ENCAB000ALN DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF085YNW, ENCFF335FQW, ENCFF750MIM 4757767 ENCODE Processing Pipeline acaa0efc85fefc9cb1fab6f3fbe41280 https://www.encodeproject.org/files/ENCFF271GZS/@@download/ENCFF271GZS.bed.gz hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF959PXZ bigBed narrowPeak peaks ENCSR000BNM ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAF7-human ENCAB000ALN DNA see document see document False 2011-07-18 ENCODE 1 ENCFF070BNL 274638 ENCODE Processing Pipeline fd21cecd9cd385374b8d6961ee1390ac https://www.encodeproject.org/files/ENCFF959PXZ/@@download/ENCFF959PXZ.bigBed hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF860QFA bigBed narrowPeak peaks ENCSR000BNM ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAF7-human ENCAB000ALN DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF271GZS 10704410 ENCODE Processing Pipeline 450351a0be6adde29f9b43fdb5417132 https://www.encodeproject.org/files/ENCFF860QFA/@@download/ENCFF860QFA.bigBed hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF700YSH bed narrowPeak conservative idr thresholded peaks ENCSR000BNM ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAF7-human ENCAB000ALN DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF001TDO, ENCFF070BNL, ENCFF271GZS, ENCFF611EGN 7061 ENCODE Processing Pipeline 838fd92d2d5ebbaf51e719b0d45567da https://www.encodeproject.org/files/ENCFF700YSH/@@download/ENCFF700YSH.bed.gz hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF034CQR bed narrowPeak optimal idr thresholded peaks ENCSR000BNM ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAF7-human ENCAB000ALN DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF001TDO, ENCFF070BNL, ENCFF271GZS, ENCFF611EGN 11755 ENCODE Processing Pipeline 7a373886ebf5e3085fc3dd43d0d662da https://www.encodeproject.org/files/ENCFF034CQR/@@download/ENCFF034CQR.bed.gz hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF594JTT bigBed narrowPeak optimal idr thresholded peaks ENCSR000BNM ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAF7-human ENCAB000ALN DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF034CQR 63711 ENCODE Processing Pipeline b2bc8b45e40f45baa9a01791adeb68d0 https://www.encodeproject.org/files/ENCFF594JTT/@@download/ENCFF594JTT.bigBed hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF211EWN bigBed narrowPeak conservative idr thresholded peaks ENCSR000BNM ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAF7-human ENCAB000ALN DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF700YSH 56070 ENCODE Processing Pipeline 7eee09eeeaa90d1d3734251f56e26026 https://www.encodeproject.org/files/ENCFF211EWN/@@download/ENCFF211EWN.bigBed hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF686DFA fastq reads ENCSR660RNO ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM4B-human ENCAB870XRH DNA False 2017-11-14 ENCODE 2 1 100 paired-ended 2 ENCFF571BGG 4040275983 Michael Snyder, Stanford eced547133d4ee50e94e62256a7da2dd https://www.encodeproject.org/files/ENCFF686DFA/@@download/ENCFF686DFA.fastq.gz Illumina HiSeq 4000 /files/ENCFF837MIV/ released borderline replicate concordance, mild to moderate bottlenecking experiment not submitted to GEO ENCFF571BGG fastq reads ENCSR660RNO ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM4B-human ENCAB870XRH DNA False 2017-11-14 ENCODE 2 1 100 paired-ended 1 ENCFF686DFA 3816185744 Michael Snyder, Stanford 9f2b8bb9884185b7a71da5ce9ddef8fd https://www.encodeproject.org/files/ENCFF571BGG/@@download/ENCFF571BGG.fastq.gz Illumina HiSeq 4000 /files/ENCFF259GQA/ released borderline replicate concordance, mild to moderate bottlenecking experiment not submitted to GEO ENCFF789QLW bam unfiltered alignments ENCSR660RNO ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM4B-human ENCAB870XRH DNA False 2017-11-14 ENCODE 2 100 ENCFF571BGG, ENCFF643CGH, ENCFF686DFA 7526610576 ENCODE Processing Pipeline f410d7d246003651056922e28f3dd226 https://www.encodeproject.org/files/ENCFF789QLW/@@download/ENCFF789QLW.bam GRCh38 released borderline replicate concordance, mild to moderate bottlenecking experiment not submitted to GEO ENCFF337AHE bam unfiltered alignments ENCSR660RNO ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM4B-human ENCAB870XRH DNA False 2017-11-14 ENCODE 2 100 ENCFF571BGG, ENCFF686DFA, ENCFF807MUK 7521215511 ENCODE Processing Pipeline 5e9fdc2bbd52f759eb3c630945f765f4 https://www.encodeproject.org/files/ENCFF337AHE/@@download/ENCFF337AHE.bam hg19 released borderline replicate concordance, mild to moderate bottlenecking experiment not submitted to GEO ENCFF850ONE bam alignments ENCSR660RNO ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM4B-human ENCAB870XRH DNA False 2017-11-14 ENCODE 2 100 ENCFF571BGG, ENCFF643CGH, ENCFF686DFA 5250982084 ENCODE Processing Pipeline 69b5794076f64a05c93fa1a1b331dd17 https://www.encodeproject.org/files/ENCFF850ONE/@@download/ENCFF850ONE.bam GRCh38 released borderline replicate concordance, mild to moderate bottlenecking experiment not submitted to GEO ENCFF502AYE bam alignments ENCSR660RNO ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM4B-human ENCAB870XRH DNA False 2017-11-14 ENCODE 2 100 ENCFF571BGG, ENCFF686DFA, ENCFF807MUK 5245554267 ENCODE Processing Pipeline 2bed5da5cc6adf7de9c51958dcd5b44d https://www.encodeproject.org/files/ENCFF502AYE/@@download/ENCFF502AYE.bam hg19 released borderline replicate concordance, mild to moderate bottlenecking experiment not submitted to GEO ENCFF807ATT fastq reads ENCSR660RNO ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM4B-human ENCAB870XRH DNA False 2017-11-14 ENCODE 3 1 101 paired-ended 2 ENCFF938LON 2748057202 Michael Snyder, Stanford 318ff789aef1a1366c734f895243c9d6 https://www.encodeproject.org/files/ENCFF807ATT/@@download/ENCFF807ATT.fastq.gz Illumina HiSeq 4000 /files/ENCFF502GTS/ released borderline replicate concordance, mild to moderate bottlenecking experiment not submitted to GEO ENCFF938LON fastq reads ENCSR660RNO ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM4B-human ENCAB870XRH DNA False 2017-11-14 ENCODE 3 1 101 paired-ended 1 ENCFF807ATT 2250039435 Michael Snyder, Stanford f629e5dcc5faa478267d44cdd1bfec39 https://www.encodeproject.org/files/ENCFF938LON/@@download/ENCFF938LON.fastq.gz Illumina HiSeq 4000 /files/ENCFF498JMO/ released borderline replicate concordance, mild to moderate bottlenecking experiment not submitted to GEO ENCFF072CHR bam unfiltered alignments ENCSR660RNO ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM4B-human ENCAB870XRH DNA False 2017-11-14 ENCODE 3 101 ENCFF807ATT, ENCFF807MUK, ENCFF938LON 4906448568 ENCODE Processing Pipeline c05dc54a9c1c61070fd01aec78127f38 https://www.encodeproject.org/files/ENCFF072CHR/@@download/ENCFF072CHR.bam hg19 released borderline replicate concordance, mild to moderate bottlenecking experiment not submitted to GEO ENCFF497YCG bam alignments ENCSR660RNO ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM4B-human ENCAB870XRH DNA False 2017-11-14 ENCODE 3 101 ENCFF807ATT, ENCFF807MUK, ENCFF938LON 3932055552 ENCODE Processing Pipeline f0c5abe3f8aaec232c8d57f5e68f39a0 https://www.encodeproject.org/files/ENCFF497YCG/@@download/ENCFF497YCG.bam hg19 released borderline replicate concordance, mild to moderate bottlenecking experiment not submitted to GEO ENCFF938QJK bam unfiltered alignments ENCSR660RNO ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM4B-human ENCAB870XRH DNA False 2017-11-14 ENCODE 3 101 ENCFF643CGH, ENCFF807ATT, ENCFF938LON 4912750305 ENCODE Processing Pipeline 5f36b292bb12c2ffcf298b1835a25ac7 https://www.encodeproject.org/files/ENCFF938QJK/@@download/ENCFF938QJK.bam GRCh38 released borderline replicate concordance, mild to moderate bottlenecking experiment not submitted to GEO ENCFF791VBW bam alignments ENCSR660RNO ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM4B-human ENCAB870XRH DNA False 2017-11-14 ENCODE 3 101 ENCFF643CGH, ENCFF807ATT, ENCFF938LON 3934270232 ENCODE Processing Pipeline 658835f1b09047ac15aa75dfa3b29955 https://www.encodeproject.org/files/ENCFF791VBW/@@download/ENCFF791VBW.bam GRCh38 released borderline replicate concordance, mild to moderate bottlenecking experiment not submitted to GEO ENCFF147WWK bigWig fold change over control ENCSR660RNO ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM4B-human ENCAB870XRH DNA False 2017-11-14 ENCODE 2, 3 ENCFF712WXB, ENCFF790TAN, ENCFF791VBW, ENCFF850ONE 2430760084 ENCODE Processing Pipeline 24d5f2d6fbcbc8c1c0a821acce39e605 https://www.encodeproject.org/files/ENCFF147WWK/@@download/ENCFF147WWK.bigWig GRCh38 released borderline replicate concordance, mild to moderate bottlenecking experiment not submitted to GEO ENCFF991ETB bigBed narrowPeak optimal idr thresholded peaks ENCSR660RNO ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM4B-human ENCAB870XRH DNA False 2017-11-14 ENCODE 2, 3 ENCFF470RHZ 99869 ENCODE Processing Pipeline c5d447c6403184abdb6abc5def3047e1 https://www.encodeproject.org/files/ENCFF991ETB/@@download/ENCFF991ETB.bigBed GRCh38 released borderline replicate concordance, mild to moderate bottlenecking experiment not submitted to GEO ENCFF469UGS bigWig signal p-value ENCSR660RNO ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM4B-human ENCAB870XRH DNA False 2017-11-14 ENCODE 2, 3 ENCFF712WXB, ENCFF790TAN, ENCFF791VBW, ENCFF850ONE 1987561419 ENCODE Processing Pipeline bf415acab797a512d054632108abf714 https://www.encodeproject.org/files/ENCFF469UGS/@@download/ENCFF469UGS.bigWig GRCh38 released borderline replicate concordance, mild to moderate bottlenecking experiment not submitted to GEO ENCFF525WAD bed narrowPeak peaks ENCSR660RNO ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM4B-human ENCAB870XRH DNA False 2017-11-14 ENCODE 2 ENCFF712WXB, ENCFF790TAN, ENCFF850ONE 6958513 ENCODE Processing Pipeline 4c1a5da1e77ded3f029229be8e7a6835 https://www.encodeproject.org/files/ENCFF525WAD/@@download/ENCFF525WAD.bed.gz GRCh38 released borderline replicate concordance, mild to moderate bottlenecking experiment not submitted to GEO ENCFF080RJE bed narrowPeak peaks ENCSR660RNO ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM4B-human ENCAB870XRH DNA False 2017-11-14 ENCODE 2, 3 ENCFF712WXB, ENCFF790TAN, ENCFF791VBW, ENCFF850ONE 7199895 ENCODE Processing Pipeline 9e107096aeef915513d9935de90ae03e https://www.encodeproject.org/files/ENCFF080RJE/@@download/ENCFF080RJE.bed.gz GRCh38 released borderline replicate concordance, mild to moderate bottlenecking experiment not submitted to GEO ENCFF431XEG bigBed narrowPeak peaks ENCSR660RNO ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM4B-human ENCAB870XRH DNA False 2017-11-14 ENCODE 2 ENCFF525WAD 11003995 ENCODE Processing Pipeline 44b3c5270ee516d426256ac1858b2415 https://www.encodeproject.org/files/ENCFF431XEG/@@download/ENCFF431XEG.bigBed GRCh38 released borderline replicate concordance, mild to moderate bottlenecking experiment not submitted to GEO ENCFF267DTG bed narrowPeak conservative idr thresholded peaks ENCSR660RNO ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM4B-human ENCAB870XRH DNA False 2017-11-14 ENCODE 2, 3 ENCFF080RJE, ENCFF414XMW, ENCFF419RSJ, ENCFF525WAD 3408 ENCODE Processing Pipeline b08609adfac73dc859efc8543f2f8c53 https://www.encodeproject.org/files/ENCFF267DTG/@@download/ENCFF267DTG.bed.gz GRCh38 released borderline replicate concordance, mild to moderate bottlenecking experiment not submitted to GEO ENCFF190BEV bigWig fold change over control ENCSR660RNO ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM4B-human ENCAB870XRH DNA False 2017-11-14 ENCODE 2 ENCFF712WXB, ENCFF790TAN, ENCFF850ONE 2028612596 ENCODE Processing Pipeline 75b55d8c2b6d4d551e6dd512a0a3c497 https://www.encodeproject.org/files/ENCFF190BEV/@@download/ENCFF190BEV.bigWig GRCh38 released borderline replicate concordance, mild to moderate bottlenecking experiment not submitted to GEO ENCFF969TLN bigWig fold change over control ENCSR660RNO ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM4B-human ENCAB870XRH DNA False 2017-11-14 ENCODE 3 ENCFF790TAN, ENCFF791VBW 1307158668 ENCODE Processing Pipeline ce960c085d9b589032b1ba5b9c216e60 https://www.encodeproject.org/files/ENCFF969TLN/@@download/ENCFF969TLN.bigWig GRCh38 released borderline replicate concordance, mild to moderate bottlenecking experiment not submitted to GEO ENCFF414XMW bed narrowPeak peaks ENCSR660RNO ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM4B-human ENCAB870XRH DNA False 2017-11-14 ENCODE 3 ENCFF790TAN, ENCFF791VBW 6377733 ENCODE Processing Pipeline d61d2c5dda397f8843144070e28950e9 https://www.encodeproject.org/files/ENCFF414XMW/@@download/ENCFF414XMW.bed.gz GRCh38 released borderline replicate concordance, mild to moderate bottlenecking experiment not submitted to GEO ENCFF755SAJ bigBed narrowPeak conservative idr thresholded peaks ENCSR660RNO ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM4B-human ENCAB870XRH DNA False 2017-11-14 ENCODE 2, 3 ENCFF267DTG 85991 ENCODE Processing Pipeline 695bae5134744d01ecac67b44f095dc1 https://www.encodeproject.org/files/ENCFF755SAJ/@@download/ENCFF755SAJ.bigBed GRCh38 released borderline replicate concordance, mild to moderate bottlenecking experiment not submitted to GEO ENCFF470RHZ bed narrowPeak optimal idr thresholded peaks ENCSR660RNO ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM4B-human ENCAB870XRH DNA False 2017-11-14 ENCODE 2, 3 ENCFF080RJE, ENCFF414XMW, ENCFF419RSJ, ENCFF525WAD 20437 ENCODE Processing Pipeline 51a09c0515ea8af92993d48e3d444f96 https://www.encodeproject.org/files/ENCFF470RHZ/@@download/ENCFF470RHZ.bed.gz GRCh38 released borderline replicate concordance, mild to moderate bottlenecking experiment not submitted to GEO ENCFF057VLD bed narrowPeak peaks ENCSR660RNO ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM4B-human ENCAB870XRH DNA False 2017-11-14 ENCODE 2 ENCFF160VXC, ENCFF502AYE, ENCFF834TUP 6954033 ENCODE Processing Pipeline ede7f808e6c666a30bbc245591fb017f https://www.encodeproject.org/files/ENCFF057VLD/@@download/ENCFF057VLD.bed.gz hg19 released borderline replicate concordance, mild to moderate bottlenecking experiment not submitted to GEO ENCFF412TZL bigWig signal p-value ENCSR660RNO ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM4B-human ENCAB870XRH DNA False 2017-11-14 ENCODE 2 ENCFF712WXB, ENCFF790TAN, ENCFF850ONE 1809195651 ENCODE Processing Pipeline 535039443e436d1da3fa4a821357b2c3 https://www.encodeproject.org/files/ENCFF412TZL/@@download/ENCFF412TZL.bigWig GRCh38 released borderline replicate concordance, mild to moderate bottlenecking experiment not submitted to GEO ENCFF920JYO bigWig signal p-value ENCSR660RNO ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM4B-human ENCAB870XRH DNA False 2017-11-14 ENCODE 2 ENCFF160VXC, ENCFF502AYE, ENCFF834TUP 1785988629 ENCODE Processing Pipeline d4af2bb368916230bb36826dd0ea4dfe https://www.encodeproject.org/files/ENCFF920JYO/@@download/ENCFF920JYO.bigWig hg19 released borderline replicate concordance, mild to moderate bottlenecking experiment not submitted to GEO ENCFF009ERI bigWig signal p-value ENCSR660RNO ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM4B-human ENCAB870XRH DNA False 2017-11-14 ENCODE 2, 3 ENCFF160VXC, ENCFF497YCG, ENCFF502AYE, ENCFF834TUP 1804860481 ENCODE Processing Pipeline 809732021b6683073a97243ddb950f9c https://www.encodeproject.org/files/ENCFF009ERI/@@download/ENCFF009ERI.bigWig hg19 released borderline replicate concordance, mild to moderate bottlenecking experiment not submitted to GEO ENCFF480PRG bigWig fold change over control ENCSR660RNO ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM4B-human ENCAB870XRH DNA False 2017-11-14 ENCODE 2, 3 ENCFF160VXC, ENCFF497YCG, ENCFF502AYE, ENCFF834TUP 2430797149 ENCODE Processing Pipeline e4b4da5f6fd509dc3aa30916ab29211c https://www.encodeproject.org/files/ENCFF480PRG/@@download/ENCFF480PRG.bigWig hg19 released borderline replicate concordance, mild to moderate bottlenecking experiment not submitted to GEO ENCFF598CYU bigWig signal p-value ENCSR660RNO ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM4B-human ENCAB870XRH DNA False 2017-11-14 ENCODE 3 ENCFF790TAN, ENCFF791VBW 1028133965 ENCODE Processing Pipeline f9c449a00a2cdff9020d2f2447274ca0 https://www.encodeproject.org/files/ENCFF598CYU/@@download/ENCFF598CYU.bigWig GRCh38 released borderline replicate concordance, mild to moderate bottlenecking experiment not submitted to GEO ENCFF675VRK bigBed narrowPeak peaks ENCSR660RNO ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM4B-human ENCAB870XRH DNA False 2017-11-14 ENCODE 3 ENCFF414XMW 10925719 ENCODE Processing Pipeline 625fde1d272c18c5a2c55b6c59e6f7b7 https://www.encodeproject.org/files/ENCFF675VRK/@@download/ENCFF675VRK.bigBed GRCh38 released borderline replicate concordance, mild to moderate bottlenecking experiment not submitted to GEO ENCFF229ATE bigBed narrowPeak peaks ENCSR660RNO ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM4B-human ENCAB870XRH DNA False 2017-11-14 ENCODE 2, 3 ENCFF080RJE 10854648 ENCODE Processing Pipeline 36e49d8041a9012620400654c7bb58c3 https://www.encodeproject.org/files/ENCFF229ATE/@@download/ENCFF229ATE.bigBed GRCh38 released borderline replicate concordance, mild to moderate bottlenecking experiment not submitted to GEO ENCFF089TKM bigWig signal p-value ENCSR660RNO ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM4B-human ENCAB870XRH DNA False 2017-11-14 ENCODE 3 ENCFF160VXC, ENCFF497YCG 1073440341 ENCODE Processing Pipeline f48a7344fecf626efa0f31d83ff483ea https://www.encodeproject.org/files/ENCFF089TKM/@@download/ENCFF089TKM.bigWig hg19 released borderline replicate concordance, mild to moderate bottlenecking experiment not submitted to GEO ENCFF053DXA bed narrowPeak conservative idr thresholded peaks ENCSR660RNO ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM4B-human ENCAB870XRH DNA False 2017-11-14 ENCODE 2, 3 ENCFF001TDO, ENCFF057VLD, ENCFF242KBX, ENCFF529YAS 3344 ENCODE Processing Pipeline 374418e772dffa7cbf977bf353f524a5 https://www.encodeproject.org/files/ENCFF053DXA/@@download/ENCFF053DXA.bed.gz hg19 released borderline replicate concordance, mild to moderate bottlenecking experiment not submitted to GEO ENCFF571VFC bigWig fold change over control ENCSR660RNO ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM4B-human ENCAB870XRH DNA False 2017-11-14 ENCODE 2 ENCFF160VXC, ENCFF502AYE, ENCFF834TUP 2037411259 ENCODE Processing Pipeline ac15b98437dee693d52a7d352df6e50e https://www.encodeproject.org/files/ENCFF571VFC/@@download/ENCFF571VFC.bigWig hg19 released borderline replicate concordance, mild to moderate bottlenecking experiment not submitted to GEO ENCFF825NIW bigWig fold change over control ENCSR660RNO ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM4B-human ENCAB870XRH DNA False 2017-11-14 ENCODE 3 ENCFF160VXC, ENCFF497YCG 1307208167 ENCODE Processing Pipeline 1857fd74b8d4d3c09321579d568f4d92 https://www.encodeproject.org/files/ENCFF825NIW/@@download/ENCFF825NIW.bigWig hg19 released borderline replicate concordance, mild to moderate bottlenecking experiment not submitted to GEO ENCFF529YAS bed narrowPeak peaks ENCSR660RNO ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM4B-human ENCAB870XRH DNA False 2017-11-14 ENCODE 2, 3 ENCFF160VXC, ENCFF497YCG, ENCFF502AYE, ENCFF834TUP 7196022 ENCODE Processing Pipeline 45a9078258541a3eece74e8c63912fda https://www.encodeproject.org/files/ENCFF529YAS/@@download/ENCFF529YAS.bed.gz hg19 released borderline replicate concordance, mild to moderate bottlenecking experiment not submitted to GEO ENCFF728COO bigBed narrowPeak peaks ENCSR660RNO ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM4B-human ENCAB870XRH DNA False 2017-11-14 ENCODE 2, 3 ENCFF529YAS 10844021 ENCODE Processing Pipeline c80b1af72a5206dba52c7792020049ff https://www.encodeproject.org/files/ENCFF728COO/@@download/ENCFF728COO.bigBed hg19 released borderline replicate concordance, mild to moderate bottlenecking experiment not submitted to GEO ENCFF727VTM bigBed narrowPeak conservative idr thresholded peaks ENCSR660RNO ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM4B-human ENCAB870XRH DNA False 2017-11-14 ENCODE 2, 3 ENCFF053DXA 84432 ENCODE Processing Pipeline bf3e0e9c868b5c7d1ca924996c995125 https://www.encodeproject.org/files/ENCFF727VTM/@@download/ENCFF727VTM.bigBed hg19 released borderline replicate concordance, mild to moderate bottlenecking experiment not submitted to GEO ENCFF956GLN bigBed narrowPeak peaks ENCSR660RNO ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM4B-human ENCAB870XRH DNA False 2017-11-14 ENCODE 2 ENCFF057VLD 10991847 ENCODE Processing Pipeline a80e0ba3549f3c741c596e73aa25b110 https://www.encodeproject.org/files/ENCFF956GLN/@@download/ENCFF956GLN.bigBed hg19 released borderline replicate concordance, mild to moderate bottlenecking experiment not submitted to GEO ENCFF242KBX bed narrowPeak peaks ENCSR660RNO ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM4B-human ENCAB870XRH DNA False 2017-11-14 ENCODE 3 ENCFF160VXC, ENCFF497YCG 6376227 ENCODE Processing Pipeline fedd267cb3d639ea64d80d7e452d586c https://www.encodeproject.org/files/ENCFF242KBX/@@download/ENCFF242KBX.bed.gz hg19 released borderline replicate concordance, mild to moderate bottlenecking experiment not submitted to GEO ENCFF477FYN bed narrowPeak optimal idr thresholded peaks ENCSR660RNO ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM4B-human ENCAB870XRH DNA False 2017-11-14 ENCODE 2, 3 ENCFF001TDO, ENCFF057VLD, ENCFF242KBX, ENCFF529YAS 21910 ENCODE Processing Pipeline f56261dc7ae02440cb56935e0f8dfe87 https://www.encodeproject.org/files/ENCFF477FYN/@@download/ENCFF477FYN.bed.gz hg19 released borderline replicate concordance, mild to moderate bottlenecking experiment not submitted to GEO ENCFF347WED bigBed narrowPeak peaks ENCSR660RNO ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM4B-human ENCAB870XRH DNA False 2017-11-14 ENCODE 3 ENCFF242KBX 10913248 ENCODE Processing Pipeline e2b722e71df0715921c272dc1a8c0bd7 https://www.encodeproject.org/files/ENCFF347WED/@@download/ENCFF347WED.bigBed hg19 released borderline replicate concordance, mild to moderate bottlenecking experiment not submitted to GEO ENCFF247LCU bigBed narrowPeak optimal idr thresholded peaks ENCSR660RNO ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM4B-human ENCAB870XRH DNA False 2017-11-14 ENCODE 2, 3 ENCFF477FYN 100850 ENCODE Processing Pipeline f568f03cf41a2f5171ac78602a5b3a55 https://www.encodeproject.org/files/ENCFF247LCU/@@download/ENCFF247LCU.bigBed hg19 released borderline replicate concordance, mild to moderate bottlenecking experiment not submitted to GEO ENCFF893OYD bam unfiltered alignments ENCSR237VLT ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB40-human ENCAB373DVF DNA False 2016-08-01 ENCODE 2 100 ENCFF520UHF, ENCFF687MII, ENCFF807MUK 6229162596 ENCODE Processing Pipeline 8e1c105d540ba82db8d2912de2b123f1 https://www.encodeproject.org/files/ENCFF893OYD/@@download/ENCFF893OYD.bam hg19 released ENCFF318VEB bam unfiltered alignments ENCSR237VLT ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB40-human ENCAB373DVF DNA False 2016-08-01 ENCODE 1 100 ENCFF297TMP, ENCFF673KNX, ENCFF807MUK 4094477799 ENCODE Processing Pipeline 8b77fc0ea8274a320984ea944b54c2af https://www.encodeproject.org/files/ENCFF318VEB/@@download/ENCFF318VEB.bam hg19 released ENCFF520UHF fastq reads ENCSR237VLT ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB40-human ENCAB373DVF DNA False 2016-08-01 ENCODE 2 1 100 paired-ended 1 ENCFF687MII 2983793857 Michael Snyder, Stanford 7dfb87cd7a0029b38ec98c1f594edbc8 SRA:SRR5111309 https://www.encodeproject.org/files/ENCFF520UHF/@@download/ENCFF520UHF.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFD/ released ENCFF687MII fastq reads ENCSR237VLT ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB40-human ENCAB373DVF DNA False 2016-08-01 ENCODE 2 1 100 paired-ended 2 ENCFF520UHF 2991244435 Michael Snyder, Stanford cb8a5a153a1640a7b34bd932eb163fdf SRA:SRR5111309 https://www.encodeproject.org/files/ENCFF687MII/@@download/ENCFF687MII.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFA/ released ENCFF673KNX fastq reads ENCSR237VLT ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB40-human ENCAB373DVF DNA False 2016-08-01 ENCODE 1 1 100 paired-ended 1 ENCFF297TMP 1919402398 Michael Snyder, Stanford fbfd40d2f00b76c5200bb3e9796abf74 SRA:SRR5111310 https://www.encodeproject.org/files/ENCFF673KNX/@@download/ENCFF673KNX.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFF/ released ENCFF297TMP fastq reads ENCSR237VLT ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB40-human ENCAB373DVF DNA False 2016-08-01 ENCODE 1 1 100 paired-ended 2 ENCFF673KNX 1970719511 Michael Snyder, Stanford e1566c4ecb122bf7b642fe1dfcc21b09 SRA:SRR5111310 https://www.encodeproject.org/files/ENCFF297TMP/@@download/ENCFF297TMP.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFH/ released ENCFF861YTF bam alignments ENCSR237VLT ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB40-human ENCAB373DVF DNA False 2016-08-01 ENCODE 1 100 ENCFF297TMP, ENCFF673KNX, ENCFF807MUK 3546358726 ENCODE Processing Pipeline a2390fd72ec30b593e33916e440fb46b https://www.encodeproject.org/files/ENCFF861YTF/@@download/ENCFF861YTF.bam hg19 released ENCFF295CQL bam alignments ENCSR237VLT ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB40-human ENCAB373DVF DNA False 2016-08-01 ENCODE 2 100 ENCFF520UHF, ENCFF687MII, ENCFF807MUK 5017115670 ENCODE Processing Pipeline 98135f564a77b04c052c6fd81e783702 https://www.encodeproject.org/files/ENCFF295CQL/@@download/ENCFF295CQL.bam hg19 released ENCFF093ZCG bigWig signal p-value ENCSR237VLT ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB40-human ENCAB373DVF DNA False 2016-08-01 ENCODE 2 ENCFF051LWI, ENCFF295CQL 1087199389 ENCODE Processing Pipeline d346bac4250218d489e1bbb857378276 https://www.encodeproject.org/files/ENCFF093ZCG/@@download/ENCFF093ZCG.bigWig hg19 released ENCFF280CXE bigWig signal p-value ENCSR237VLT ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB40-human ENCAB373DVF DNA False 2016-08-01 ENCODE 1, 2 ENCFF051LWI, ENCFF295CQL, ENCFF581ZJL, ENCFF861YTF 1797363843 ENCODE Processing Pipeline c20709e83d29fb64ef2be36999e1822a https://www.encodeproject.org/files/ENCFF280CXE/@@download/ENCFF280CXE.bigWig hg19 released ENCFF285JPS bigWig fold change over control ENCSR237VLT ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB40-human ENCAB373DVF DNA False 2016-08-01 ENCODE 2 ENCFF051LWI, ENCFF295CQL 1121868629 ENCODE Processing Pipeline 54c8ecbde8aa587f71b1f7eab82026a8 https://www.encodeproject.org/files/ENCFF285JPS/@@download/ENCFF285JPS.bigWig hg19 released ENCFF882ZUY bigWig fold change over control ENCSR237VLT ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB40-human ENCAB373DVF DNA False 2016-08-01 ENCODE 1, 2 ENCFF051LWI, ENCFF295CQL, ENCFF581ZJL, ENCFF861YTF 1986864109 ENCODE Processing Pipeline c0285b74e3e32f4274538a9dbfd5ed4a https://www.encodeproject.org/files/ENCFF882ZUY/@@download/ENCFF882ZUY.bigWig hg19 released ENCFF789ZEC bam unfiltered alignments ENCSR237VLT ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB40-human ENCAB373DVF DNA False 2016-08-01 ENCODE 1 100 ENCFF297TMP, ENCFF643CGH, ENCFF673KNX 4097032674 ENCODE Processing Pipeline 9a9f452d651abf84ae6ff96ee6cf626e https://www.encodeproject.org/files/ENCFF789ZEC/@@download/ENCFF789ZEC.bam GRCh38 released ENCFF775MLD bam unfiltered alignments ENCSR237VLT ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB40-human ENCAB373DVF DNA False 2016-08-01 ENCODE 2 100 ENCFF520UHF, ENCFF643CGH, ENCFF687MII 6232782113 ENCODE Processing Pipeline 5586db8c55238120b5dfbea5025e0791 https://www.encodeproject.org/files/ENCFF775MLD/@@download/ENCFF775MLD.bam GRCh38 released ENCFF873BRB bam alignments ENCSR237VLT ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB40-human ENCAB373DVF DNA False 2016-08-01 ENCODE 1 100 ENCFF297TMP, ENCFF643CGH, ENCFF673KNX 3548729693 ENCODE Processing Pipeline 3a6324a3b1a450246099d985152f6071 https://www.encodeproject.org/files/ENCFF873BRB/@@download/ENCFF873BRB.bam GRCh38 released ENCFF149LTH bam alignments ENCSR237VLT ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB40-human ENCAB373DVF DNA False 2016-08-01 ENCODE 2 100 ENCFF520UHF, ENCFF643CGH, ENCFF687MII 5019702036 ENCODE Processing Pipeline 8f13acc1985a56faec31c7d59ec765bb https://www.encodeproject.org/files/ENCFF149LTH/@@download/ENCFF149LTH.bam GRCh38 released ENCFF271VVA bigWig signal p-value ENCSR237VLT ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB40-human ENCAB373DVF DNA False 2016-08-01 ENCODE 1 ENCFF873BRB, ENCFF910IKB 1167077218 ENCODE Processing Pipeline bcb11fd09d8bc22a77780a2c5a36ccfb https://www.encodeproject.org/files/ENCFF271VVA/@@download/ENCFF271VVA.bigWig GRCh38 released ENCFF879HIN bigWig signal p-value ENCSR237VLT ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB40-human ENCAB373DVF DNA False 2016-08-01 ENCODE 2 ENCFF149LTH, ENCFF227IZS 1100869497 ENCODE Processing Pipeline e91e8762bdd2e0eb60e3dfaff7b2c9d5 https://www.encodeproject.org/files/ENCFF879HIN/@@download/ENCFF879HIN.bigWig GRCh38 released ENCFF386OLG bigWig signal p-value ENCSR237VLT ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB40-human ENCAB373DVF DNA False 2016-08-01 ENCODE 1, 2 ENCFF149LTH, ENCFF227IZS, ENCFF873BRB, ENCFF910IKB 1610023365 ENCODE Processing Pipeline 0f0e42dfda6a98fdd881326980c83025 https://www.encodeproject.org/files/ENCFF386OLG/@@download/ENCFF386OLG.bigWig GRCh38 released ENCFF556ANS bigWig fold change over control ENCSR237VLT ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB40-human ENCAB373DVF DNA False 2016-08-01 ENCODE 1 ENCFF873BRB, ENCFF910IKB 1027740221 ENCODE Processing Pipeline 69411591a729fd8db2d2c192c0bc5698 https://www.encodeproject.org/files/ENCFF556ANS/@@download/ENCFF556ANS.bigWig GRCh38 released ENCFF486KRK bigWig fold change over control ENCSR237VLT ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB40-human ENCAB373DVF DNA False 2016-08-01 ENCODE 2 ENCFF149LTH, ENCFF227IZS 1105722107 ENCODE Processing Pipeline 93d039a3a36c5fd98c20626859ebee38 https://www.encodeproject.org/files/ENCFF486KRK/@@download/ENCFF486KRK.bigWig GRCh38 released ENCFF455HJE bigWig fold change over control ENCSR237VLT ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB40-human ENCAB373DVF DNA False 2016-08-01 ENCODE 1, 2 ENCFF149LTH, ENCFF227IZS, ENCFF873BRB, ENCFF910IKB 2012661231 ENCODE Processing Pipeline fb435ebd38839867e3b42ca4ff115951 https://www.encodeproject.org/files/ENCFF455HJE/@@download/ENCFF455HJE.bigWig GRCh38 released ENCFF564UTR bed narrowPeak peaks ENCSR237VLT ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB40-human ENCAB373DVF DNA False 2016-08-01 ENCODE 1 ENCFF873BRB, ENCFF910IKB 6966286 ENCODE Processing Pipeline ae4085d2674045c516927ad3b830905b https://www.encodeproject.org/files/ENCFF564UTR/@@download/ENCFF564UTR.bed.gz GRCh38 released ENCFF118UYB bed narrowPeak peaks ENCSR237VLT ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB40-human ENCAB373DVF DNA False 2016-08-01 ENCODE 2 ENCFF149LTH, ENCFF227IZS 7132481 ENCODE Processing Pipeline b6872dc8aae8cb232b01e7801f1a1720 https://www.encodeproject.org/files/ENCFF118UYB/@@download/ENCFF118UYB.bed.gz GRCh38 released ENCFF058FAF bed narrowPeak peaks ENCSR237VLT ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB40-human ENCAB373DVF DNA False 2016-08-01 ENCODE 1, 2 ENCFF149LTH, ENCFF227IZS, ENCFF873BRB, ENCFF910IKB 7222565 ENCODE Processing Pipeline 21c7ac322ab0c6808345be3fa8f86d25 https://www.encodeproject.org/files/ENCFF058FAF/@@download/ENCFF058FAF.bed.gz GRCh38 released ENCFF980KGS bigBed narrowPeak peaks ENCSR237VLT ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB40-human ENCAB373DVF DNA False 2016-08-01 ENCODE 1 ENCFF564UTR 12744940 ENCODE Processing Pipeline 278918ce6ae0074ff11b9dfefd25e601 https://www.encodeproject.org/files/ENCFF980KGS/@@download/ENCFF980KGS.bigBed GRCh38 released ENCFF403VRU bigBed narrowPeak peaks ENCSR237VLT ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB40-human ENCAB373DVF DNA False 2016-08-01 ENCODE 2 ENCFF118UYB 12948007 ENCODE Processing Pipeline 4eae1cd672d2de03a276d3048b7f840f https://www.encodeproject.org/files/ENCFF403VRU/@@download/ENCFF403VRU.bigBed GRCh38 released ENCFF317PUE bigBed narrowPeak peaks ENCSR237VLT ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB40-human ENCAB373DVF DNA False 2016-08-01 ENCODE 1, 2 ENCFF058FAF 12813538 ENCODE Processing Pipeline 27c7e5a41b9602c1f257203bc497b02d https://www.encodeproject.org/files/ENCFF317PUE/@@download/ENCFF317PUE.bigBed GRCh38 released ENCFF571NDF bed narrowPeak conservative idr thresholded peaks ENCSR237VLT ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB40-human ENCAB373DVF DNA False 2016-08-01 ENCODE 1, 2 ENCFF058FAF, ENCFF118UYB, ENCFF419RSJ, ENCFF564UTR 518271 ENCODE Processing Pipeline ac1b57f6fdf886135da15fcacaa3be15 https://www.encodeproject.org/files/ENCFF571NDF/@@download/ENCFF571NDF.bed.gz GRCh38 released ENCFF870XSS bigBed narrowPeak conservative idr thresholded peaks ENCSR237VLT ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB40-human ENCAB373DVF DNA False 2016-08-01 ENCODE 1, 2 ENCFF571NDF 1075694 ENCODE Processing Pipeline fde5aff3be5e834b7ef98b33ef0ab2ac https://www.encodeproject.org/files/ENCFF870XSS/@@download/ENCFF870XSS.bigBed GRCh38 released ENCFF088LZZ bed narrowPeak optimal idr thresholded peaks ENCSR237VLT ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB40-human ENCAB373DVF DNA False 2016-08-01 ENCODE 1, 2 ENCFF058FAF, ENCFF118UYB, ENCFF419RSJ, ENCFF564UTR 551900 ENCODE Processing Pipeline 6b756a71455696367d8fba2829e048c9 https://www.encodeproject.org/files/ENCFF088LZZ/@@download/ENCFF088LZZ.bed.gz GRCh38 released ENCFF429WFB bigBed narrowPeak optimal idr thresholded peaks ENCSR237VLT ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB40-human ENCAB373DVF DNA False 2016-08-01 ENCODE 1, 2 ENCFF088LZZ 1131933 ENCODE Processing Pipeline 1e3609fccc29af3e380f63d56660ef3d https://www.encodeproject.org/files/ENCFF429WFB/@@download/ENCFF429WFB.bigBed GRCh38 released ENCFF293ZSN bigWig signal p-value ENCSR237VLT ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB40-human ENCAB373DVF DNA False 2016-08-01 ENCODE 1 ENCFF581ZJL, ENCFF861YTF 1111893123 ENCODE Processing Pipeline d5a6bdcd7b0a2ae122bdc6e627399ddf https://www.encodeproject.org/files/ENCFF293ZSN/@@download/ENCFF293ZSN.bigWig hg19 released ENCFF853IOO bigWig fold change over control ENCSR237VLT ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB40-human ENCAB373DVF DNA False 2016-08-01 ENCODE 1 ENCFF581ZJL, ENCFF861YTF 1023266649 ENCODE Processing Pipeline 17098a13d2e8bc20b74e3c77826a8717 https://www.encodeproject.org/files/ENCFF853IOO/@@download/ENCFF853IOO.bigWig hg19 released ENCFF707CDO bed narrowPeak peaks ENCSR237VLT ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB40-human ENCAB373DVF DNA False 2016-08-01 ENCODE 2 ENCFF051LWI, ENCFF295CQL 7127888 ENCODE Processing Pipeline 4dcaba83d4d91c73c9e927c32207b2d4 https://www.encodeproject.org/files/ENCFF707CDO/@@download/ENCFF707CDO.bed.gz hg19 released ENCFF417LEJ bed narrowPeak optimal idr thresholded peaks ENCSR237VLT ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB40-human ENCAB373DVF DNA False 2016-08-01 ENCODE 1, 2 ENCFF001TDO, ENCFF361LXO, ENCFF707CDO, ENCFF727WJU 563762 ENCODE Processing Pipeline ee5c6e2a9253142ea4ec418a2668994d https://www.encodeproject.org/files/ENCFF417LEJ/@@download/ENCFF417LEJ.bed.gz hg19 released ENCFF361LXO bed narrowPeak peaks ENCSR237VLT ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB40-human ENCAB373DVF DNA False 2016-08-01 ENCODE 1, 2 ENCFF051LWI, ENCFF295CQL, ENCFF581ZJL, ENCFF861YTF 7247839 ENCODE Processing Pipeline 7a23ac37a95706e8f7e5a1fa01ae85c0 https://www.encodeproject.org/files/ENCFF361LXO/@@download/ENCFF361LXO.bed.gz hg19 released ENCFF727WJU bed narrowPeak peaks ENCSR237VLT ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB40-human ENCAB373DVF DNA False 2016-08-01 ENCODE 1 ENCFF581ZJL, ENCFF861YTF 7063882 ENCODE Processing Pipeline 12166be600da69a05f8b8c0a2b48599d https://www.encodeproject.org/files/ENCFF727WJU/@@download/ENCFF727WJU.bed.gz hg19 released ENCFF839XGU bigBed narrowPeak peaks ENCSR237VLT ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB40-human ENCAB373DVF DNA False 2016-08-01 ENCODE 1, 2 ENCFF361LXO 12831932 ENCODE Processing Pipeline 0d1844b23010f651a0789b0187a30dd2 https://www.encodeproject.org/files/ENCFF839XGU/@@download/ENCFF839XGU.bigBed hg19 released ENCFF593VVO bed narrowPeak conservative idr thresholded peaks ENCSR237VLT ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB40-human ENCAB373DVF DNA False 2016-08-01 ENCODE 1, 2 ENCFF001TDO, ENCFF361LXO, ENCFF707CDO, ENCFF727WJU 526638 ENCODE Processing Pipeline bbec7cf52676b9209866f20a813e9731 https://www.encodeproject.org/files/ENCFF593VVO/@@download/ENCFF593VVO.bed.gz hg19 released ENCFF095LZU bigBed narrowPeak peaks ENCSR237VLT ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB40-human ENCAB373DVF DNA False 2016-08-01 ENCODE 1 ENCFF727WJU 12839737 ENCODE Processing Pipeline 9dd56b2b8cc5e16ae859d5b6d6c45647 https://www.encodeproject.org/files/ENCFF095LZU/@@download/ENCFF095LZU.bigBed hg19 released ENCFF618LQL bigBed narrowPeak peaks ENCSR237VLT ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB40-human ENCAB373DVF DNA False 2016-08-01 ENCODE 2 ENCFF707CDO 12940113 ENCODE Processing Pipeline 994644efbce1ccab1541e03d758faee1 https://www.encodeproject.org/files/ENCFF618LQL/@@download/ENCFF618LQL.bigBed hg19 released ENCFF198FDZ bigBed narrowPeak conservative idr thresholded peaks ENCSR237VLT ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB40-human ENCAB373DVF DNA False 2016-08-01 ENCODE 1, 2 ENCFF593VVO 1085869 ENCODE Processing Pipeline 49a78ab1e2ef999e876f4113e0d75c77 https://www.encodeproject.org/files/ENCFF198FDZ/@@download/ENCFF198FDZ.bigBed hg19 released ENCFF217UMI bigBed narrowPeak optimal idr thresholded peaks ENCSR237VLT ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB40-human ENCAB373DVF DNA False 2016-08-01 ENCODE 1, 2 ENCFF417LEJ 1146924 ENCODE Processing Pipeline 80d208b462de9bf2f399f0a3baf58e55 https://www.encodeproject.org/files/ENCFF217UMI/@@download/ENCFF217UMI.bigBed hg19 released ENCFF275IQO bam unfiltered alignments ENCSR907MZR ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM24-human ENCAB440APL DNA False 2016-07-28 ENCODE 1 100 ENCFF107WKN, ENCFF807MUK, ENCFF950QCU 5910908040 ENCODE Processing Pipeline 2bad52b62741de91669ed572a83423c8 https://www.encodeproject.org/files/ENCFF275IQO/@@download/ENCFF275IQO.bam hg19 released ENCFF170PZN bam unfiltered alignments ENCSR907MZR ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM24-human ENCAB440APL DNA False 2016-07-28 ENCODE 2 100 ENCFF300IMG, ENCFF334HNS, ENCFF807MUK 5043579220 ENCODE Processing Pipeline 59c54badf906f72291d5717c20ea9a1d https://www.encodeproject.org/files/ENCFF170PZN/@@download/ENCFF170PZN.bam hg19 released ENCFF300IMG fastq reads ENCSR907MZR ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM24-human ENCAB440APL DNA False 2016-07-28 ENCODE 2 1 100 paired-ended 2 ENCFF334HNS 2362296410 Michael Snyder, Stanford f623a8fb01a0730b918be100e48cbec8 SRA:SRR5112298 https://www.encodeproject.org/files/ENCFF300IMG/@@download/ENCFF300IMG.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFA/ released ENCFF334HNS fastq reads ENCSR907MZR ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM24-human ENCAB440APL DNA False 2016-07-28 ENCODE 2 1 100 paired-ended 1 ENCFF300IMG 2312642119 Michael Snyder, Stanford 65a7fdc366c33fad7c7eada3f1881528 SRA:SRR5112298 https://www.encodeproject.org/files/ENCFF334HNS/@@download/ENCFF334HNS.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFD/ released ENCFF107WKN fastq reads ENCSR907MZR ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM24-human ENCAB440APL DNA False 2016-07-28 ENCODE 1 1 100 paired-ended 1 ENCFF950QCU 2745491616 Michael Snyder, Stanford aaffc35d4a708183f7b613aa74945111 SRA:SRR5112297 https://www.encodeproject.org/files/ENCFF107WKN/@@download/ENCFF107WKN.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFF/ released ENCFF950QCU fastq reads ENCSR907MZR ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM24-human ENCAB440APL DNA False 2016-07-28 ENCODE 1 1 100 paired-ended 2 ENCFF107WKN 2797344051 Michael Snyder, Stanford 05137e1b08f46ad2eb7706a0442b6574 SRA:SRR5112297 https://www.encodeproject.org/files/ENCFF950QCU/@@download/ENCFF950QCU.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFH/ released ENCFF293FTN bam alignments ENCSR907MZR ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM24-human ENCAB440APL DNA False 2016-07-28 ENCODE 2 ENCFF300IMG, ENCFF334HNS, ENCFF807MUK 4146751739 ENCODE Processing Pipeline ec5343d7f8308e16629172cc52e89603 https://www.encodeproject.org/files/ENCFF293FTN/@@download/ENCFF293FTN.bam hg19 released ENCFF030VNO bam alignments ENCSR907MZR ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM24-human ENCAB440APL DNA False 2016-07-28 ENCODE 1 ENCFF107WKN, ENCFF807MUK, ENCFF950QCU 4847850836 ENCODE Processing Pipeline 82f19871147a75cc12b297b61d6549e1 https://www.encodeproject.org/files/ENCFF030VNO/@@download/ENCFF030VNO.bam hg19 released ENCFF534KDG bigWig signal p-value ENCSR907MZR ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM24-human ENCAB440APL DNA False 2016-07-28 ENCODE 1 ENCFF030VNO, ENCFF581ZJL 1407072141 ENCODE Processing Pipeline 70b956f209c924da818048c6d1c87963 https://www.encodeproject.org/files/ENCFF534KDG/@@download/ENCFF534KDG.bigWig hg19 released ENCFF665OXC bigWig signal p-value ENCSR907MZR ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM24-human ENCAB440APL DNA False 2016-07-28 ENCODE 2 ENCFF051LWI, ENCFF293FTN 1153486186 ENCODE Processing Pipeline ef803e5be2a706dc4940f7c19d57b631 https://www.encodeproject.org/files/ENCFF665OXC/@@download/ENCFF665OXC.bigWig hg19 released ENCFF159VOP bigWig signal p-value ENCSR907MZR ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM24-human ENCAB440APL DNA False 2016-07-28 ENCODE 1, 2 ENCFF030VNO, ENCFF051LWI, ENCFF293FTN, ENCFF581ZJL 2126361424 ENCODE Processing Pipeline 6d8128b13ede751c6587c976eda701bf https://www.encodeproject.org/files/ENCFF159VOP/@@download/ENCFF159VOP.bigWig hg19 released ENCFF809NCM bigWig fold change over control ENCSR907MZR ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM24-human ENCAB440APL DNA False 2016-07-28 ENCODE 1 ENCFF030VNO, ENCFF581ZJL 1312548225 ENCODE Processing Pipeline 8bddfcc2388f27d5444c4d0b0e140318 https://www.encodeproject.org/files/ENCFF809NCM/@@download/ENCFF809NCM.bigWig hg19 released ENCFF988XTY bigWig fold change over control ENCSR907MZR ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM24-human ENCAB440APL DNA False 2016-07-28 ENCODE 2 ENCFF051LWI, ENCFF293FTN 1128947507 ENCODE Processing Pipeline f7afc1654c8e4fe122e3e30d58484cc4 https://www.encodeproject.org/files/ENCFF988XTY/@@download/ENCFF988XTY.bigWig hg19 released ENCFF469CQS bigBed narrowPeak peaks ENCSR907MZR ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM24-human ENCAB440APL DNA False 2016-07-28 ENCODE 1 ENCFF816EGL 13082654 ENCODE Processing Pipeline f665217eb907c2cf49fafe18ddf77399 https://www.encodeproject.org/files/ENCFF469CQS/@@download/ENCFF469CQS.bigBed hg19 released ENCFF127MAS bed narrowPeak peaks ENCSR907MZR ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM24-human ENCAB440APL DNA False 2016-07-28 ENCODE 1, 2 ENCFF030VNO, ENCFF051LWI, ENCFF293FTN, ENCFF581ZJL 7248174 ENCODE Processing Pipeline efa71e3f661982c3607f80b53f2dfe80 https://www.encodeproject.org/files/ENCFF127MAS/@@download/ENCFF127MAS.bed.gz hg19 released ENCFF856IOQ bed narrowPeak peaks ENCSR907MZR ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM24-human ENCAB440APL DNA False 2016-07-28 ENCODE 2 ENCFF051LWI, ENCFF293FTN 7007064 ENCODE Processing Pipeline ae25957c3193462c602438160b8c2ba7 https://www.encodeproject.org/files/ENCFF856IOQ/@@download/ENCFF856IOQ.bed.gz hg19 released ENCFF376CHW bigBed narrowPeak optimal idr thresholded peaks ENCSR907MZR ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM24-human ENCAB440APL DNA False 2016-07-28 ENCODE 1, 2 ENCFF646VQW 1216912 ENCODE Processing Pipeline b4a4bd34b9383e9bafcce70e15027750 https://www.encodeproject.org/files/ENCFF376CHW/@@download/ENCFF376CHW.bigBed hg19 released ENCFF816EGL bed narrowPeak peaks ENCSR907MZR ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM24-human ENCAB440APL DNA False 2016-07-28 ENCODE 1 ENCFF030VNO, ENCFF581ZJL 7132065 ENCODE Processing Pipeline 0680be1dc095e0e4b488f230d0f6608d https://www.encodeproject.org/files/ENCFF816EGL/@@download/ENCFF816EGL.bed.gz hg19 released ENCFF646VQW bed narrowPeak optimal idr thresholded peaks ENCSR907MZR ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM24-human ENCAB440APL DNA False 2016-07-28 ENCODE 1, 2 ENCFF001TDO, ENCFF127MAS, ENCFF816EGL, ENCFF856IOQ 621283 ENCODE Processing Pipeline 74f7c15fa48b8b2fb599b23015bb2563 https://www.encodeproject.org/files/ENCFF646VQW/@@download/ENCFF646VQW.bed.gz hg19 released ENCFF868YDK bigWig fold change over control ENCSR907MZR ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM24-human ENCAB440APL DNA False 2016-07-28 ENCODE 1, 2 ENCFF030VNO, ENCFF051LWI, ENCFF293FTN, ENCFF581ZJL 2167644869 ENCODE Processing Pipeline aad99d98ce43d7855db70787039a9b4a https://www.encodeproject.org/files/ENCFF868YDK/@@download/ENCFF868YDK.bigWig hg19 released ENCFF157PMK bigBed narrowPeak peaks ENCSR907MZR ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM24-human ENCAB440APL DNA False 2016-07-28 ENCODE 2 ENCFF856IOQ 13276093 ENCODE Processing Pipeline a802e7b2972800e49e6106b461ace29e https://www.encodeproject.org/files/ENCFF157PMK/@@download/ENCFF157PMK.bigBed hg19 released ENCFF647EPQ bed narrowPeak conservative idr thresholded peaks ENCSR907MZR ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM24-human ENCAB440APL DNA False 2016-07-28 ENCODE 1, 2 ENCFF001TDO, ENCFF127MAS, ENCFF816EGL, ENCFF856IOQ 442995 ENCODE Processing Pipeline 5be8bd5e5b9ca2a667b825dddc9d095d https://www.encodeproject.org/files/ENCFF647EPQ/@@download/ENCFF647EPQ.bed.gz hg19 released ENCFF823IUD bigBed narrowPeak conservative idr thresholded peaks ENCSR907MZR ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM24-human ENCAB440APL DNA False 2016-07-28 ENCODE 1, 2 ENCFF647EPQ 935205 ENCODE Processing Pipeline a6a7474909e2a5140e584fbfce393874 https://www.encodeproject.org/files/ENCFF823IUD/@@download/ENCFF823IUD.bigBed hg19 released ENCFF605XDO bigBed narrowPeak peaks ENCSR907MZR ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM24-human ENCAB440APL DNA False 2016-07-28 ENCODE 1, 2 ENCFF127MAS 13071637 ENCODE Processing Pipeline 56fd4cef9a4e2c6d327964fa2b67c212 https://www.encodeproject.org/files/ENCFF605XDO/@@download/ENCFF605XDO.bigBed hg19 released ENCFF071CRE bam unfiltered alignments ENCSR907MZR ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM24-human ENCAB440APL DNA False 2016-07-28 ENCODE 2 100 ENCFF300IMG, ENCFF334HNS, ENCFF643CGH 5047652486 ENCODE Processing Pipeline 52a860afa1c22c213149f6207a5379b5 https://www.encodeproject.org/files/ENCFF071CRE/@@download/ENCFF071CRE.bam GRCh38 released ENCFF923LMN bam alignments ENCSR907MZR ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM24-human ENCAB440APL DNA False 2016-07-28 ENCODE 2 100 ENCFF300IMG, ENCFF334HNS, ENCFF643CGH 4150617098 ENCODE Processing Pipeline 18f4fd8d0440d1b3635936617b1f8671 https://www.encodeproject.org/files/ENCFF923LMN/@@download/ENCFF923LMN.bam GRCh38 released ENCFF545YDJ bam unfiltered alignments ENCSR907MZR ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM24-human ENCAB440APL DNA False 2016-07-28 ENCODE 1 100 ENCFF107WKN, ENCFF643CGH, ENCFF950QCU 5914683025 ENCODE Processing Pipeline 269d1a9166d41d8312c023146a040bf3 https://www.encodeproject.org/files/ENCFF545YDJ/@@download/ENCFF545YDJ.bam GRCh38 released ENCFF551IFV bam alignments ENCSR907MZR ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM24-human ENCAB440APL DNA False 2016-07-28 ENCODE 1 100 ENCFF107WKN, ENCFF643CGH, ENCFF950QCU 4851050996 ENCODE Processing Pipeline e24600f98ad1ed659b1da918bbbc8e9e https://www.encodeproject.org/files/ENCFF551IFV/@@download/ENCFF551IFV.bam GRCh38 released ENCFF536GBE bigWig signal p-value ENCSR907MZR ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM24-human ENCAB440APL DNA False 2016-07-28 ENCODE 1 ENCFF551IFV, ENCFF910IKB 1090090832 ENCODE Processing Pipeline 0dbe5873f0445a1ef231d16f3504890e https://www.encodeproject.org/files/ENCFF536GBE/@@download/ENCFF536GBE.bigWig GRCh38 released ENCFF106LPZ bigWig signal p-value ENCSR907MZR ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM24-human ENCAB440APL DNA False 2016-07-28 ENCODE 2 ENCFF227IZS, ENCFF923LMN 1106331326 ENCODE Processing Pipeline b18d0cd32db267bc2c907bbc5c5e2be8 https://www.encodeproject.org/files/ENCFF106LPZ/@@download/ENCFF106LPZ.bigWig GRCh38 released ENCFF926BKQ bigWig signal p-value ENCSR907MZR ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM24-human ENCAB440APL DNA False 2016-07-28 ENCODE 1, 2 ENCFF227IZS, ENCFF551IFV, ENCFF910IKB, ENCFF923LMN 1916202864 ENCODE Processing Pipeline 9c252bd0c7070d29ae779c3fe0a11bd7 https://www.encodeproject.org/files/ENCFF926BKQ/@@download/ENCFF926BKQ.bigWig GRCh38 released ENCFF002IFN bigWig fold change over control ENCSR907MZR ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM24-human ENCAB440APL DNA False 2016-07-28 ENCODE 1 ENCFF551IFV, ENCFF910IKB 1320174556 ENCODE Processing Pipeline a46f3fc23c7c7c09720a46aad309134e https://www.encodeproject.org/files/ENCFF002IFN/@@download/ENCFF002IFN.bigWig GRCh38 released ENCFF265LLD bigWig fold change over control ENCSR907MZR ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM24-human ENCAB440APL DNA False 2016-07-28 ENCODE 2 ENCFF227IZS, ENCFF923LMN 1130673114 ENCODE Processing Pipeline 9f624b1f676b668e1917957dd2817c26 https://www.encodeproject.org/files/ENCFF265LLD/@@download/ENCFF265LLD.bigWig GRCh38 released ENCFF398OOI bigWig fold change over control ENCSR907MZR ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM24-human ENCAB440APL DNA False 2016-07-28 ENCODE 1, 2 ENCFF227IZS, ENCFF551IFV, ENCFF910IKB, ENCFF923LMN 2189526546 ENCODE Processing Pipeline 0188ba4aaff8eac461b35dfbb2cb72f9 https://www.encodeproject.org/files/ENCFF398OOI/@@download/ENCFF398OOI.bigWig GRCh38 released ENCFF138SQK bed narrowPeak peaks ENCSR907MZR ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM24-human ENCAB440APL DNA False 2016-07-28 ENCODE 1 ENCFF551IFV, ENCFF910IKB 7045635 ENCODE Processing Pipeline 0890d982ee973fd384230043d8c1f870 https://www.encodeproject.org/files/ENCFF138SQK/@@download/ENCFF138SQK.bed.gz GRCh38 released ENCFF024BEZ bed narrowPeak peaks ENCSR907MZR ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM24-human ENCAB440APL DNA False 2016-07-28 ENCODE 2 ENCFF227IZS, ENCFF923LMN 6927208 ENCODE Processing Pipeline 8ade1d8fa2d1a1973a651e5da95eff35 https://www.encodeproject.org/files/ENCFF024BEZ/@@download/ENCFF024BEZ.bed.gz GRCh38 released ENCFF461ZWP bed narrowPeak peaks ENCSR907MZR ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM24-human ENCAB440APL DNA False 2016-07-28 ENCODE 1, 2 ENCFF227IZS, ENCFF551IFV, ENCFF910IKB, ENCFF923LMN 7236048 ENCODE Processing Pipeline bf80e764f5b7fb97655213b27d8f34be https://www.encodeproject.org/files/ENCFF461ZWP/@@download/ENCFF461ZWP.bed.gz GRCh38 released ENCFF381OQQ bigBed narrowPeak peaks ENCSR907MZR ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM24-human ENCAB440APL DNA False 2016-07-28 ENCODE 1 ENCFF138SQK 13063738 ENCODE Processing Pipeline a55c39849b67d5b6326e9475d1e7e8c9 https://www.encodeproject.org/files/ENCFF381OQQ/@@download/ENCFF381OQQ.bigBed GRCh38 released ENCFF927ITQ bigBed narrowPeak peaks ENCSR907MZR ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM24-human ENCAB440APL DNA False 2016-07-28 ENCODE 2 ENCFF024BEZ 13272352 ENCODE Processing Pipeline 491234db2e49f31c8dc7b0c22d05c0bd https://www.encodeproject.org/files/ENCFF927ITQ/@@download/ENCFF927ITQ.bigBed GRCh38 released ENCFF226JPE bigBed narrowPeak peaks ENCSR907MZR ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM24-human ENCAB440APL DNA False 2016-07-28 ENCODE 1, 2 ENCFF461ZWP 13072844 ENCODE Processing Pipeline 3bc76a3df1cb096f7f8e7d5bc5643275 https://www.encodeproject.org/files/ENCFF226JPE/@@download/ENCFF226JPE.bigBed GRCh38 released ENCFF263NDI bed narrowPeak conservative idr thresholded peaks ENCSR907MZR ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM24-human ENCAB440APL DNA False 2016-07-28 ENCODE 1, 2 ENCFF024BEZ, ENCFF138SQK, ENCFF419RSJ, ENCFF461ZWP 441643 ENCODE Processing Pipeline 79d7ff2e44217193f2c934be2c6436dc https://www.encodeproject.org/files/ENCFF263NDI/@@download/ENCFF263NDI.bed.gz GRCh38 released ENCFF691DNA bigBed narrowPeak conservative idr thresholded peaks ENCSR907MZR ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM24-human ENCAB440APL DNA False 2016-07-28 ENCODE 1, 2 ENCFF263NDI 936709 ENCODE Processing Pipeline 22d56d97f89e7df4bd58d39e211193f3 https://www.encodeproject.org/files/ENCFF691DNA/@@download/ENCFF691DNA.bigBed GRCh38 released ENCFF063NXI bed narrowPeak optimal idr thresholded peaks ENCSR907MZR ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM24-human ENCAB440APL DNA False 2016-07-28 ENCODE 1, 2 ENCFF024BEZ, ENCFF138SQK, ENCFF419RSJ, ENCFF461ZWP 622936 ENCODE Processing Pipeline b6c9eb5283c3caed90a72319bac3b3e5 https://www.encodeproject.org/files/ENCFF063NXI/@@download/ENCFF063NXI.bed.gz GRCh38 released ENCFF052MBA bigBed narrowPeak optimal idr thresholded peaks ENCSR907MZR ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM24-human ENCAB440APL DNA False 2016-07-28 ENCODE 1, 2 ENCFF063NXI 1224286 ENCODE Processing Pipeline dfe18ba2811ce41de0325e5713994bb1 https://www.encodeproject.org/files/ENCFF052MBA/@@download/ENCFF052MBA.bigBed GRCh38 released ENCFF359KRZ bam unfiltered alignments ENCSR091JXL ChIP-seq EFO:0002067 K562 cell line Homo sapiens HES1-human ENCAB724OQW DNA False 2016-07-08 ENCODE 2 100 ENCFF583IRH, ENCFF600EDO, ENCFF807MUK 5073920195 ENCODE Processing Pipeline fc7b53f8c4fb9e2f5eedab53709f97ff https://www.encodeproject.org/files/ENCFF359KRZ/@@download/ENCFF359KRZ.bam hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF676ZFB bam unfiltered alignments ENCSR091JXL ChIP-seq EFO:0002067 K562 cell line Homo sapiens HES1-human ENCAB724OQW DNA False 2016-07-08 ENCODE 1 100 ENCFF429KAX, ENCFF807MUK, ENCFF887TVH 4182328038 ENCODE Processing Pipeline aa97d004d9061b89c659b6f4ae541fe2 https://www.encodeproject.org/files/ENCFF676ZFB/@@download/ENCFF676ZFB.bam hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF429KAX fastq reads ENCSR091JXL ChIP-seq EFO:0002067 K562 cell line Homo sapiens HES1-human ENCAB724OQW DNA False 2016-07-08 ENCODE 1 1 100 paired-ended 1 ENCFF887TVH 1939627558 Michael Snyder, Stanford 6e6c34cc6e57b76e393f84a0e29ec93b SRA:SRR5111088 https://www.encodeproject.org/files/ENCFF429KAX/@@download/ENCFF429KAX.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFF/ released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF600EDO fastq reads ENCSR091JXL ChIP-seq EFO:0002067 K562 cell line Homo sapiens HES1-human ENCAB724OQW DNA False 2016-07-08 ENCODE 2 1 100 paired-ended 2 ENCFF583IRH 2451046861 Michael Snyder, Stanford eb0d19d2b0c9da658a959b72afc7cbc0 SRA:SRR5111087 https://www.encodeproject.org/files/ENCFF600EDO/@@download/ENCFF600EDO.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFA/ released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF887TVH fastq reads ENCSR091JXL ChIP-seq EFO:0002067 K562 cell line Homo sapiens HES1-human ENCAB724OQW DNA False 2016-07-08 ENCODE 1 1 100 paired-ended 2 ENCFF429KAX 1967694806 Michael Snyder, Stanford 0bd42a11feb24f9dd92ea4663bbd2e02 SRA:SRR5111088 https://www.encodeproject.org/files/ENCFF887TVH/@@download/ENCFF887TVH.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFH/ released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF583IRH fastq reads ENCSR091JXL ChIP-seq EFO:0002067 K562 cell line Homo sapiens HES1-human ENCAB724OQW DNA False 2016-07-08 ENCODE 2 1 100 paired-ended 1 ENCFF600EDO 2369968909 Michael Snyder, Stanford c673e5bbc9d533f36b1179c60452d6bd SRA:SRR5111087 https://www.encodeproject.org/files/ENCFF583IRH/@@download/ENCFF583IRH.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFD/ released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF989OSX bam alignments ENCSR091JXL ChIP-seq EFO:0002067 K562 cell line Homo sapiens HES1-human ENCAB724OQW DNA False 2016-07-08 ENCODE 1 100 ENCFF429KAX, ENCFF807MUK, ENCFF887TVH 3202535359 ENCODE Processing Pipeline 45b9f6977ba52a1c75d0bebbb9678ad8 https://www.encodeproject.org/files/ENCFF989OSX/@@download/ENCFF989OSX.bam hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF853EMP bam alignments ENCSR091JXL ChIP-seq EFO:0002067 K562 cell line Homo sapiens HES1-human ENCAB724OQW DNA False 2016-07-08 ENCODE 2 100 ENCFF583IRH, ENCFF600EDO, ENCFF807MUK 3401950065 ENCODE Processing Pipeline 6eae94a18a68352a92be423af4199b14 https://www.encodeproject.org/files/ENCFF853EMP/@@download/ENCFF853EMP.bam hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF125UNP bigWig signal p-value ENCSR091JXL ChIP-seq EFO:0002067 K562 cell line Homo sapiens HES1-human ENCAB724OQW DNA False 2016-07-08 ENCODE 1 ENCFF581ZJL, ENCFF989OSX 1012548431 ENCODE Processing Pipeline 00bab13b85ca4e7b232dbf41b48626ae https://www.encodeproject.org/files/ENCFF125UNP/@@download/ENCFF125UNP.bigWig hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF547DHR bigWig signal p-value ENCSR091JXL ChIP-seq EFO:0002067 K562 cell line Homo sapiens HES1-human ENCAB724OQW DNA False 2016-07-08 ENCODE 2 ENCFF051LWI, ENCFF853EMP 1061586950 ENCODE Processing Pipeline 4e2c21ca2d2fca4b8b1d760b9f129fb9 https://www.encodeproject.org/files/ENCFF547DHR/@@download/ENCFF547DHR.bigWig hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF515WMP bigWig signal p-value ENCSR091JXL ChIP-seq EFO:0002067 K562 cell line Homo sapiens HES1-human ENCAB724OQW DNA False 2016-07-08 ENCODE 1, 2 ENCFF051LWI, ENCFF581ZJL, ENCFF853EMP, ENCFF989OSX 1877699558 ENCODE Processing Pipeline e0f85aa41284c0bd15a33c45f250d7f7 https://www.encodeproject.org/files/ENCFF515WMP/@@download/ENCFF515WMP.bigWig hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF017MTO bigWig fold change over control ENCSR091JXL ChIP-seq EFO:0002067 K562 cell line Homo sapiens HES1-human ENCAB724OQW DNA False 2016-07-08 ENCODE 1 ENCFF581ZJL, ENCFF989OSX 1025478043 ENCODE Processing Pipeline f9dba1cd2e9af7db041f6908d5eba6bd https://www.encodeproject.org/files/ENCFF017MTO/@@download/ENCFF017MTO.bigWig hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF581LOB bigWig fold change over control ENCSR091JXL ChIP-seq EFO:0002067 K562 cell line Homo sapiens HES1-human ENCAB724OQW DNA False 2016-07-08 ENCODE 2 ENCFF051LWI, ENCFF853EMP 973386894 ENCODE Processing Pipeline 48bdb4624f808255a6cc6ab3fcf44276 https://www.encodeproject.org/files/ENCFF581LOB/@@download/ENCFF581LOB.bigWig hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF071USV bigWig fold change over control ENCSR091JXL ChIP-seq EFO:0002067 K562 cell line Homo sapiens HES1-human ENCAB724OQW DNA False 2016-07-08 ENCODE 1, 2 ENCFF051LWI, ENCFF581ZJL, ENCFF853EMP, ENCFF989OSX 1906649010 ENCODE Processing Pipeline e001ef4891281512f53c83530f16d4c4 https://www.encodeproject.org/files/ENCFF071USV/@@download/ENCFF071USV.bigWig hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF860KMP bed narrowPeak peaks ENCSR091JXL ChIP-seq EFO:0002067 K562 cell line Homo sapiens HES1-human ENCAB724OQW DNA False 2016-07-08 ENCODE 2 ENCFF051LWI, ENCFF853EMP 6406002 ENCODE Processing Pipeline d30d79c50d0e12b2f2743ff47d3af71d https://www.encodeproject.org/files/ENCFF860KMP/@@download/ENCFF860KMP.bed.gz hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF581TVI bigBed narrowPeak peaks ENCSR091JXL ChIP-seq EFO:0002067 K562 cell line Homo sapiens HES1-human ENCAB724OQW DNA False 2016-07-08 ENCODE 1 ENCFF222PPL 13344627 ENCODE Processing Pipeline a33cec70325aefced3c0a5d6b7fcc1ac https://www.encodeproject.org/files/ENCFF581TVI/@@download/ENCFF581TVI.bigBed hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF222PPL bed narrowPeak peaks ENCSR091JXL ChIP-seq EFO:0002067 K562 cell line Homo sapiens HES1-human ENCAB724OQW DNA False 2016-07-08 ENCODE 1 ENCFF581ZJL, ENCFF989OSX 6412170 ENCODE Processing Pipeline f703f936ce9333620ca52565db1f4a11 https://www.encodeproject.org/files/ENCFF222PPL/@@download/ENCFF222PPL.bed.gz hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF786MKH bed narrowPeak peaks ENCSR091JXL ChIP-seq EFO:0002067 K562 cell line Homo sapiens HES1-human ENCAB724OQW DNA False 2016-07-08 ENCODE 1, 2 ENCFF051LWI, ENCFF581ZJL, ENCFF853EMP, ENCFF989OSX 7165721 ENCODE Processing Pipeline f5b2581e60dd754101ff2cf93317003e https://www.encodeproject.org/files/ENCFF786MKH/@@download/ENCFF786MKH.bed.gz hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF915IZB bigBed narrowPeak peaks ENCSR091JXL ChIP-seq EFO:0002067 K562 cell line Homo sapiens HES1-human ENCAB724OQW DNA False 2016-07-08 ENCODE 1, 2 ENCFF786MKH 13178532 ENCODE Processing Pipeline 13fa1017e7eee074b47a7d8a5dfe8fe6 https://www.encodeproject.org/files/ENCFF915IZB/@@download/ENCFF915IZB.bigBed hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF206AXD bigBed narrowPeak peaks ENCSR091JXL ChIP-seq EFO:0002067 K562 cell line Homo sapiens HES1-human ENCAB724OQW DNA False 2016-07-08 ENCODE 2 ENCFF860KMP 13335492 ENCODE Processing Pipeline 2f782c2dc8090aa9a121a1b7c55bef3e https://www.encodeproject.org/files/ENCFF206AXD/@@download/ENCFF206AXD.bigBed hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF635ZWL bam unfiltered alignments ENCSR091JXL ChIP-seq EFO:0002067 K562 cell line Homo sapiens HES1-human ENCAB724OQW DNA False 2016-07-08 ENCODE 1 100 ENCFF429KAX, ENCFF643CGH, ENCFF887TVH 4185264165 ENCODE Processing Pipeline 2a51cbc849d48ed6118a365c4d141d52 https://www.encodeproject.org/files/ENCFF635ZWL/@@download/ENCFF635ZWL.bam GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF180TDZ bam unfiltered alignments ENCSR091JXL ChIP-seq EFO:0002067 K562 cell line Homo sapiens HES1-human ENCAB724OQW DNA False 2016-07-08 ENCODE 2 100 ENCFF583IRH, ENCFF600EDO, ENCFF643CGH 5076922561 ENCODE Processing Pipeline 1d4547908597850f2923250dcf481312 https://www.encodeproject.org/files/ENCFF180TDZ/@@download/ENCFF180TDZ.bam GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF502NAY bam alignments ENCSR091JXL ChIP-seq EFO:0002067 K562 cell line Homo sapiens HES1-human ENCAB724OQW DNA False 2016-07-08 ENCODE 1 100 ENCFF429KAX, ENCFF643CGH, ENCFF887TVH 3203567462 ENCODE Processing Pipeline bbda9ec8bc87ae5396fbf47bd13eba9d https://www.encodeproject.org/files/ENCFF502NAY/@@download/ENCFF502NAY.bam GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF046ACV bam alignments ENCSR091JXL ChIP-seq EFO:0002067 K562 cell line Homo sapiens HES1-human ENCAB724OQW DNA False 2016-07-08 ENCODE 2 100 ENCFF583IRH, ENCFF600EDO, ENCFF643CGH 3403164493 ENCODE Processing Pipeline 06f610e04393700af7d812a1feb2d1ca https://www.encodeproject.org/files/ENCFF046ACV/@@download/ENCFF046ACV.bam GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF825EYJ bigWig signal p-value ENCSR091JXL ChIP-seq EFO:0002067 K562 cell line Homo sapiens HES1-human ENCAB724OQW DNA False 2016-07-08 ENCODE 1 ENCFF502NAY, ENCFF910IKB 1017841571 ENCODE Processing Pipeline c64015a1aa3a140df7a25258ab8e9f74 https://www.encodeproject.org/files/ENCFF825EYJ/@@download/ENCFF825EYJ.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF187FHI bigWig signal p-value ENCSR091JXL ChIP-seq EFO:0002067 K562 cell line Homo sapiens HES1-human ENCAB724OQW DNA False 2016-07-08 ENCODE 2 ENCFF046ACV, ENCFF227IZS 1063139900 ENCODE Processing Pipeline afd09f59982fe9ff0f70ffe73f56cc6a https://www.encodeproject.org/files/ENCFF187FHI/@@download/ENCFF187FHI.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF453AFB bigWig signal p-value ENCSR091JXL ChIP-seq EFO:0002067 K562 cell line Homo sapiens HES1-human ENCAB724OQW DNA False 2016-07-08 ENCODE 1, 2 ENCFF046ACV, ENCFF227IZS, ENCFF502NAY, ENCFF910IKB 1900440338 ENCODE Processing Pipeline af585b6eefc1cb588450fafda540e9e8 https://www.encodeproject.org/files/ENCFF453AFB/@@download/ENCFF453AFB.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF131QDP bigWig fold change over control ENCSR091JXL ChIP-seq EFO:0002067 K562 cell line Homo sapiens HES1-human ENCAB724OQW DNA False 2016-07-08 ENCODE 1 ENCFF502NAY, ENCFF910IKB 1017029930 ENCODE Processing Pipeline 316541a351ff23526952caddfdf50fa5 https://www.encodeproject.org/files/ENCFF131QDP/@@download/ENCFF131QDP.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF578CUN bigWig fold change over control ENCSR091JXL ChIP-seq EFO:0002067 K562 cell line Homo sapiens HES1-human ENCAB724OQW DNA False 2016-07-08 ENCODE 2 ENCFF046ACV, ENCFF227IZS 970750890 ENCODE Processing Pipeline b5928b51c1c6c52e8dce59c938605b77 https://www.encodeproject.org/files/ENCFF578CUN/@@download/ENCFF578CUN.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF883YBM bigWig fold change over control ENCSR091JXL ChIP-seq EFO:0002067 K562 cell line Homo sapiens HES1-human ENCAB724OQW DNA False 2016-07-08 ENCODE 1, 2 ENCFF046ACV, ENCFF227IZS, ENCFF502NAY, ENCFF910IKB 1907139044 ENCODE Processing Pipeline 59ebb2a7d6714c3e437f5cada5342f61 https://www.encodeproject.org/files/ENCFF883YBM/@@download/ENCFF883YBM.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF524BVG bed narrowPeak peaks ENCSR091JXL ChIP-seq EFO:0002067 K562 cell line Homo sapiens HES1-human ENCAB724OQW DNA False 2016-07-08 ENCODE 1 ENCFF502NAY, ENCFF910IKB 6285306 ENCODE Processing Pipeline c19dae0e19a1dae0cd68b54ed60295f6 https://www.encodeproject.org/files/ENCFF524BVG/@@download/ENCFF524BVG.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF913QZG bed narrowPeak peaks ENCSR091JXL ChIP-seq EFO:0002067 K562 cell line Homo sapiens HES1-human ENCAB724OQW DNA False 2016-07-08 ENCODE 2 ENCFF046ACV, ENCFF227IZS 6280116 ENCODE Processing Pipeline e466bc2e046a0bd805a23d8b9aefe247 https://www.encodeproject.org/files/ENCFF913QZG/@@download/ENCFF913QZG.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF982UTK bed narrowPeak peaks ENCSR091JXL ChIP-seq EFO:0002067 K562 cell line Homo sapiens HES1-human ENCAB724OQW DNA False 2016-07-08 ENCODE 1, 2 ENCFF046ACV, ENCFF227IZS, ENCFF502NAY, ENCFF910IKB 7127557 ENCODE Processing Pipeline 014ba2bc893f64ca2a21fe2e666a3a9e https://www.encodeproject.org/files/ENCFF982UTK/@@download/ENCFF982UTK.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF974OJF bigBed narrowPeak peaks ENCSR091JXL ChIP-seq EFO:0002067 K562 cell line Homo sapiens HES1-human ENCAB724OQW DNA False 2016-07-08 ENCODE 1 ENCFF524BVG 13347005 ENCODE Processing Pipeline be438a21285af63dfebd66bcbd8e09e0 https://www.encodeproject.org/files/ENCFF974OJF/@@download/ENCFF974OJF.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF110IQV bigBed narrowPeak peaks ENCSR091JXL ChIP-seq EFO:0002067 K562 cell line Homo sapiens HES1-human ENCAB724OQW DNA False 2016-07-08 ENCODE 2 ENCFF913QZG 13328826 ENCODE Processing Pipeline b8b3f81e1da0d0384fa71985c865c63b https://www.encodeproject.org/files/ENCFF110IQV/@@download/ENCFF110IQV.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF135CCN bigBed narrowPeak peaks ENCSR091JXL ChIP-seq EFO:0002067 K562 cell line Homo sapiens HES1-human ENCAB724OQW DNA False 2016-07-08 ENCODE 1, 2 ENCFF982UTK 13199757 ENCODE Processing Pipeline d451107a575355375ef40e79848aa0cc https://www.encodeproject.org/files/ENCFF135CCN/@@download/ENCFF135CCN.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF558HHY bed narrowPeak conservative idr thresholded peaks ENCSR091JXL ChIP-seq EFO:0002067 K562 cell line Homo sapiens HES1-human ENCAB724OQW DNA False 2016-07-08 ENCODE 1, 2 ENCFF419RSJ, ENCFF524BVG, ENCFF913QZG, ENCFF982UTK 157189 ENCODE Processing Pipeline 3eb93e46e6d41c359a5d4174b89899ef https://www.encodeproject.org/files/ENCFF558HHY/@@download/ENCFF558HHY.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF372JZP bigBed narrowPeak conservative idr thresholded peaks ENCSR091JXL ChIP-seq EFO:0002067 K562 cell line Homo sapiens HES1-human ENCAB724OQW DNA False 2016-07-08 ENCODE 1, 2 ENCFF558HHY 346650 ENCODE Processing Pipeline 4079e3af46ebc3ea4f0b9b4ae330f50f https://www.encodeproject.org/files/ENCFF372JZP/@@download/ENCFF372JZP.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF010OOE bed narrowPeak optimal idr thresholded peaks ENCSR091JXL ChIP-seq EFO:0002067 K562 cell line Homo sapiens HES1-human ENCAB724OQW DNA False 2016-07-08 ENCODE 1, 2 ENCFF419RSJ, ENCFF524BVG, ENCFF913QZG, ENCFF982UTK 209209 ENCODE Processing Pipeline c13baaaec9ca12f5c386ff6409336470 https://www.encodeproject.org/files/ENCFF010OOE/@@download/ENCFF010OOE.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF237ZXL bigBed narrowPeak optimal idr thresholded peaks ENCSR091JXL ChIP-seq EFO:0002067 K562 cell line Homo sapiens HES1-human ENCAB724OQW DNA False 2016-07-08 ENCODE 1, 2 ENCFF010OOE 422076 ENCODE Processing Pipeline bf9f78c454930d1411ece47f727b85da https://www.encodeproject.org/files/ENCFF237ZXL/@@download/ENCFF237ZXL.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF419FNX bed narrowPeak conservative idr thresholded peaks ENCSR091JXL ChIP-seq EFO:0002067 K562 cell line Homo sapiens HES1-human ENCAB724OQW DNA False 2016-07-08 ENCODE 1, 2 ENCFF001TDO, ENCFF222PPL, ENCFF786MKH, ENCFF860KMP 129320 ENCODE Processing Pipeline 0deb1f296b994a9298e1eb724825fc43 https://www.encodeproject.org/files/ENCFF419FNX/@@download/ENCFF419FNX.bed.gz hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF839NZU bigBed narrowPeak conservative idr thresholded peaks ENCSR091JXL ChIP-seq EFO:0002067 K562 cell line Homo sapiens HES1-human ENCAB724OQW DNA False 2016-07-08 ENCODE 1, 2 ENCFF419FNX 248835 ENCODE Processing Pipeline fcb6ade099adfa1ccb7ae3fdac3f69fc https://www.encodeproject.org/files/ENCFF839NZU/@@download/ENCFF839NZU.bigBed hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF676NPW bed narrowPeak optimal idr thresholded peaks ENCSR091JXL ChIP-seq EFO:0002067 K562 cell line Homo sapiens HES1-human ENCAB724OQW DNA False 2016-07-08 ENCODE 1, 2 ENCFF001TDO, ENCFF222PPL, ENCFF786MKH, ENCFF860KMP 171892 ENCODE Processing Pipeline b2426299acedb3521638e6d425f68ba5 https://www.encodeproject.org/files/ENCFF676NPW/@@download/ENCFF676NPW.bed.gz hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF173TGY bigBed narrowPeak optimal idr thresholded peaks ENCSR091JXL ChIP-seq EFO:0002067 K562 cell line Homo sapiens HES1-human ENCAB724OQW DNA False 2016-07-08 ENCODE 1, 2 ENCFF676NPW 369532 ENCODE Processing Pipeline 04a0fc47056bd8de9f96bad9280d5582 https://www.encodeproject.org/files/ENCFF173TGY/@@download/ENCFF173TGY.bigBed hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF415SRB bam unfiltered alignments ENCSR550HCT ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-KLF1-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1 100 ENCFF807MUK, ENCFF807OLO, ENCFF942FDD 5999183164 ENCODE Processing Pipeline 05ff23b57440c65429ea4ade84dbd44e https://www.encodeproject.org/files/ENCFF415SRB/@@download/ENCFF415SRB.bam hg19 released missing genetic modification characterization missing control alignments ENCFF257DIX bam unfiltered alignments ENCSR550HCT ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-KLF1-human ENCAB728YTO DNA False 2016-01-14 ENCODE 2 100 ENCFF438UFH, ENCFF807MUK, ENCFF994DFN 6054573160 ENCODE Processing Pipeline 8d89f3528ecbbc597ce2f89222d0fa57 https://www.encodeproject.org/files/ENCFF257DIX/@@download/ENCFF257DIX.bam hg19 released missing genetic modification characterization missing control alignments ENCFF807OLO fastq reads ENCSR550HCT ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-KLF1-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1 1 100 paired-ended 2 ENCFF942FDD 2754041770 Michael Snyder, Stanford bcf0e73e571a7e09e4dab8501cc4323a SRA:SRR5111747 https://www.encodeproject.org/files/ENCFF807OLO/@@download/ENCFF807OLO.fastq.gz Illumina HiSeq 2000 /files/ENCFF419AVJ/ released missing genetic modification characterization missing control alignments ENCFF994DFN fastq reads ENCSR550HCT ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-KLF1-human ENCAB728YTO DNA False 2016-01-14 ENCODE 2 1 100 paired-ended 1 ENCFF438UFH 2778362142 Michael Snyder, Stanford 14f3ff06d7dfe4c13cfdff366e226c1a SRA:SRR5111746 https://www.encodeproject.org/files/ENCFF994DFN/@@download/ENCFF994DFN.fastq.gz Illumina HiSeq 2000 /files/ENCFF918QAP/ released missing genetic modification characterization missing control alignments ENCFF438UFH fastq reads ENCSR550HCT ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-KLF1-human ENCAB728YTO DNA False 2016-01-14 ENCODE 2 1 100 paired-ended 2 ENCFF994DFN 2770312370 Michael Snyder, Stanford 5f8cf21523bf2266f6542f768535ecbe SRA:SRR5111746 https://www.encodeproject.org/files/ENCFF438UFH/@@download/ENCFF438UFH.fastq.gz Illumina HiSeq 2000 /files/ENCFF419AVJ/ released missing genetic modification characterization missing control alignments ENCFF942FDD fastq reads ENCSR550HCT ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-KLF1-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1 1 100 paired-ended 1 ENCFF807OLO 2759154489 Michael Snyder, Stanford d98cea0616998d959052939ad744f4cd SRA:SRR5111747 https://www.encodeproject.org/files/ENCFF942FDD/@@download/ENCFF942FDD.fastq.gz Illumina HiSeq 2000 /files/ENCFF918QAP/ released missing genetic modification characterization missing control alignments ENCFF929AIJ bam alignments ENCSR550HCT ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-KLF1-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1 100 ENCFF807MUK, ENCFF807OLO, ENCFF942FDD 5159466376 ENCODE Processing Pipeline 95cb0d0b0cfbb64b261ae470f577d976 https://www.encodeproject.org/files/ENCFF929AIJ/@@download/ENCFF929AIJ.bam hg19 released missing genetic modification characterization missing control alignments ENCFF630NYB bam alignments ENCSR550HCT ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-KLF1-human ENCAB728YTO DNA False 2016-01-14 ENCODE 2 100 ENCFF438UFH, ENCFF807MUK, ENCFF994DFN 5304234218 ENCODE Processing Pipeline 1da982435a8bc49e319b1f5696d5eb85 https://www.encodeproject.org/files/ENCFF630NYB/@@download/ENCFF630NYB.bam hg19 released missing genetic modification characterization missing control alignments ENCFF429IQP bigWig signal p-value ENCSR550HCT ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-KLF1-human ENCAB728YTO DNA False 2016-01-14 ENCODE 2 ENCFF630NYB, ENCFF675KUA 1116256550 ENCODE Processing Pipeline df6f80e896eb42639fe7d955724acd4c https://www.encodeproject.org/files/ENCFF429IQP/@@download/ENCFF429IQP.bigWig hg19 released missing genetic modification characterization missing control alignments ENCFF153SCC bigWig signal p-value ENCSR550HCT ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-KLF1-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF630NYB, ENCFF675KUA, ENCFF929AIJ 1065767496 ENCODE Processing Pipeline 2602246e7e78413e7297e506467a5d17 https://www.encodeproject.org/files/ENCFF153SCC/@@download/ENCFF153SCC.bigWig hg19 released missing genetic modification characterization missing control alignments ENCFF940QWH bigWig fold change over control ENCSR550HCT ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-KLF1-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1 ENCFF675KUA, ENCFF929AIJ 1210045992 ENCODE Processing Pipeline 206fc822c20f0da9930de57ce87b3873 https://www.encodeproject.org/files/ENCFF940QWH/@@download/ENCFF940QWH.bigWig hg19 released missing genetic modification characterization missing control alignments ENCFF349PCU bigWig fold change over control ENCSR550HCT ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-KLF1-human ENCAB728YTO DNA False 2016-01-14 ENCODE 2 ENCFF630NYB, ENCFF675KUA 1236992906 ENCODE Processing Pipeline b932e4ac1ded9762569829464cae8c3f https://www.encodeproject.org/files/ENCFF349PCU/@@download/ENCFF349PCU.bigWig hg19 released missing genetic modification characterization missing control alignments ENCFF514OUD bigWig signal p-value ENCSR550HCT ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-KLF1-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1 ENCFF675KUA, ENCFF929AIJ 1114832330 ENCODE Processing Pipeline f1e50cd99ab2656321bea5f1d6f6cd2c https://www.encodeproject.org/files/ENCFF514OUD/@@download/ENCFF514OUD.bigWig hg19 released missing genetic modification characterization missing control alignments ENCFF061GJT bigWig fold change over control ENCSR550HCT ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-KLF1-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF630NYB, ENCFF675KUA, ENCFF929AIJ 1841648269 ENCODE Processing Pipeline 4f049501318398d07aaf5fd3e562df9b https://www.encodeproject.org/files/ENCFF061GJT/@@download/ENCFF061GJT.bigWig hg19 released missing genetic modification characterization missing control alignments ENCFF099BYY bam unfiltered alignments ENCSR550HCT ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-KLF1-human ENCAB728YTO DNA False 2016-01-14 ENCODE 2 100 ENCFF438UFH, ENCFF643CGH, ENCFF994DFN 6065155796 ENCODE Processing Pipeline 780c7d573bf9db85bf4d725f76cd0da3 https://www.encodeproject.org/files/ENCFF099BYY/@@download/ENCFF099BYY.bam GRCh38 released missing genetic modification characterization missing control alignments ENCFF185DKY bam unfiltered alignments ENCSR550HCT ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-KLF1-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1 100 ENCFF643CGH, ENCFF807OLO, ENCFF942FDD 6009970535 ENCODE Processing Pipeline 2f4466998b8b9d160339182e719e2b71 https://www.encodeproject.org/files/ENCFF185DKY/@@download/ENCFF185DKY.bam GRCh38 released missing genetic modification characterization missing control alignments ENCFF378QWS bam alignments ENCSR550HCT ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-KLF1-human ENCAB728YTO DNA False 2016-01-14 ENCODE 2 100 ENCFF438UFH, ENCFF643CGH, ENCFF994DFN 5308384950 ENCODE Processing Pipeline 4f3c52895c6b867d874690c70e99960a https://www.encodeproject.org/files/ENCFF378QWS/@@download/ENCFF378QWS.bam GRCh38 released missing genetic modification characterization missing control alignments ENCFF878UKW bam alignments ENCSR550HCT ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-KLF1-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1 100 ENCFF643CGH, ENCFF807OLO, ENCFF942FDD 5162800080 ENCODE Processing Pipeline 97a674507fc671e2c8188bf9417ad1e1 https://www.encodeproject.org/files/ENCFF878UKW/@@download/ENCFF878UKW.bam GRCh38 released missing genetic modification characterization missing control alignments ENCFF160AHO bigWig signal p-value ENCSR550HCT ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-KLF1-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1 ENCFF878UKW 1116612527 ENCODE Processing Pipeline 673cb2b323d791ddf92fcf0f9f376879 https://www.encodeproject.org/files/ENCFF160AHO/@@download/ENCFF160AHO.bigWig GRCh38 released missing genetic modification characterization missing control alignments ENCFF647ZWZ bigWig signal p-value ENCSR550HCT ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-KLF1-human ENCAB728YTO DNA False 2016-01-14 ENCODE 2 ENCFF378QWS 1118181049 ENCODE Processing Pipeline 6fd459de6323d48cfe39ab6a81fadafa https://www.encodeproject.org/files/ENCFF647ZWZ/@@download/ENCFF647ZWZ.bigWig GRCh38 released missing genetic modification characterization missing control alignments ENCFF667BQS bigWig signal p-value ENCSR550HCT ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-KLF1-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF378QWS, ENCFF878UKW 1078266979 ENCODE Processing Pipeline d49cc90d87dd09ba08e48902af856ad3 https://www.encodeproject.org/files/ENCFF667BQS/@@download/ENCFF667BQS.bigWig GRCh38 released missing genetic modification characterization missing control alignments ENCFF723QDQ bigWig fold change over control ENCSR550HCT ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-KLF1-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1 ENCFF878UKW 1211762718 ENCODE Processing Pipeline faf434a48157b830be15540668b07a92 https://www.encodeproject.org/files/ENCFF723QDQ/@@download/ENCFF723QDQ.bigWig GRCh38 released missing genetic modification characterization missing control alignments ENCFF194WFM bigWig fold change over control ENCSR550HCT ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-KLF1-human ENCAB728YTO DNA False 2016-01-14 ENCODE 2 ENCFF378QWS 1235469796 ENCODE Processing Pipeline 01d67e4c4bf525b93067ef7a5180faa8 https://www.encodeproject.org/files/ENCFF194WFM/@@download/ENCFF194WFM.bigWig GRCh38 released missing genetic modification characterization missing control alignments ENCFF191STL bigWig fold change over control ENCSR550HCT ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-KLF1-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF378QWS, ENCFF878UKW 1861047155 ENCODE Processing Pipeline ae0ab8a37dbf60036238729276246c96 https://www.encodeproject.org/files/ENCFF191STL/@@download/ENCFF191STL.bigWig GRCh38 released missing genetic modification characterization missing control alignments ENCFF886YGC bed narrowPeak peaks ENCSR550HCT ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-KLF1-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1 ENCFF878UKW 6487146 ENCODE Processing Pipeline 2be9aa46645d6ea3e6ef3df84c27ffa2 https://www.encodeproject.org/files/ENCFF886YGC/@@download/ENCFF886YGC.bed.gz GRCh38 released missing genetic modification characterization missing control alignments ENCFF563YTX bed narrowPeak peaks ENCSR550HCT ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-KLF1-human ENCAB728YTO DNA False 2016-01-14 ENCODE 2 ENCFF378QWS 6629776 ENCODE Processing Pipeline 05a7ca4e0219e56ce7ced16bef428130 https://www.encodeproject.org/files/ENCFF563YTX/@@download/ENCFF563YTX.bed.gz GRCh38 released missing genetic modification characterization missing control alignments ENCFF344ZPO bed narrowPeak peaks ENCSR550HCT ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-KLF1-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF378QWS, ENCFF878UKW 7132314 ENCODE Processing Pipeline 5843c2c157da38dfd0a9cca3056136b7 https://www.encodeproject.org/files/ENCFF344ZPO/@@download/ENCFF344ZPO.bed.gz GRCh38 released missing genetic modification characterization missing control alignments ENCFF545XRC bigBed narrowPeak peaks ENCSR550HCT ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-KLF1-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1 ENCFF886YGC 11108638 ENCODE Processing Pipeline b76fd9c9cf1dd13a817861632f35cb54 https://www.encodeproject.org/files/ENCFF545XRC/@@download/ENCFF545XRC.bigBed GRCh38 released missing genetic modification characterization missing control alignments ENCFF202MFT bigBed narrowPeak peaks ENCSR550HCT ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-KLF1-human ENCAB728YTO DNA False 2016-01-14 ENCODE 2 ENCFF563YTX 13230859 ENCODE Processing Pipeline ea863ec385d700e55be6c49480cf8c1e https://www.encodeproject.org/files/ENCFF202MFT/@@download/ENCFF202MFT.bigBed GRCh38 released missing genetic modification characterization missing control alignments ENCFF998NUD bigBed narrowPeak peaks ENCSR550HCT ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-KLF1-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF344ZPO 13051558 ENCODE Processing Pipeline cbce9eb2250703539ec05419abd02616 https://www.encodeproject.org/files/ENCFF998NUD/@@download/ENCFF998NUD.bigBed GRCh38 released missing genetic modification characterization missing control alignments ENCFF625FYY bed narrowPeak conservative idr thresholded peaks ENCSR550HCT ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-KLF1-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF344ZPO, ENCFF419RSJ, ENCFF563YTX, ENCFF886YGC 161924 ENCODE Processing Pipeline 2bb0ea95ed7946957ca896cbc0262448 https://www.encodeproject.org/files/ENCFF625FYY/@@download/ENCFF625FYY.bed.gz GRCh38 released missing genetic modification characterization missing control alignments ENCFF154AVN bigBed narrowPeak conservative idr thresholded peaks ENCSR550HCT ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-KLF1-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF625FYY 388309 ENCODE Processing Pipeline f8625d90d5fd6626a5af865a6960ab1a https://www.encodeproject.org/files/ENCFF154AVN/@@download/ENCFF154AVN.bigBed GRCh38 released missing genetic modification characterization missing control alignments ENCFF287GDT bed narrowPeak optimal idr thresholded peaks ENCSR550HCT ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-KLF1-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF344ZPO, ENCFF419RSJ, ENCFF563YTX, ENCFF886YGC 219361 ENCODE Processing Pipeline f8a5c7ac5b7fc36191a5f8785030e1dd https://www.encodeproject.org/files/ENCFF287GDT/@@download/ENCFF287GDT.bed.gz GRCh38 released missing genetic modification characterization missing control alignments ENCFF936SUW bigBed narrowPeak optimal idr thresholded peaks ENCSR550HCT ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-KLF1-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF287GDT 486187 ENCODE Processing Pipeline 6e0778993359efe1eb4fbe1a35bd5ce5 https://www.encodeproject.org/files/ENCFF936SUW/@@download/ENCFF936SUW.bigBed GRCh38 released missing genetic modification characterization missing control alignments ENCFF204DNA bigBed narrowPeak peaks ENCSR550HCT ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-KLF1-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1 ENCFF830SMA 11090734 ENCODE Processing Pipeline a14982d43b1ae98286155c0a142bcc36 https://www.encodeproject.org/files/ENCFF204DNA/@@download/ENCFF204DNA.bigBed hg19 released missing genetic modification characterization missing control alignments ENCFF830SMA bed narrowPeak peaks ENCSR550HCT ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-KLF1-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1 ENCFF675KUA, ENCFF929AIJ 6484837 ENCODE Processing Pipeline 9f337526edf3461d6521791dee0f24c5 https://www.encodeproject.org/files/ENCFF830SMA/@@download/ENCFF830SMA.bed.gz hg19 released missing genetic modification characterization missing control alignments ENCFF604GTI bigBed narrowPeak peaks ENCSR550HCT ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-KLF1-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF255LGM 13038615 ENCODE Processing Pipeline 268e0c1400661ef3f07d7d1438f769a0 https://www.encodeproject.org/files/ENCFF604GTI/@@download/ENCFF604GTI.bigBed hg19 released missing genetic modification characterization missing control alignments ENCFF754ZLZ bigBed narrowPeak conservative idr thresholded peaks ENCSR550HCT ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-KLF1-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF581HPR 388482 ENCODE Processing Pipeline e6777177e66d256ba09a008c42fe1039 https://www.encodeproject.org/files/ENCFF754ZLZ/@@download/ENCFF754ZLZ.bigBed hg19 released missing genetic modification characterization missing control alignments ENCFF239BGX bigBed narrowPeak optimal idr thresholded peaks ENCSR550HCT ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-KLF1-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF717TWA 485540 ENCODE Processing Pipeline 740804ce3dc4bced57dc5d70960fba05 https://www.encodeproject.org/files/ENCFF239BGX/@@download/ENCFF239BGX.bigBed hg19 released missing genetic modification characterization missing control alignments ENCFF255LGM bed narrowPeak peaks ENCSR550HCT ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-KLF1-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF630NYB, ENCFF675KUA, ENCFF929AIJ 7130529 ENCODE Processing Pipeline 6e83c1b938f397820dbf794db89f4c4d https://www.encodeproject.org/files/ENCFF255LGM/@@download/ENCFF255LGM.bed.gz hg19 released missing genetic modification characterization missing control alignments ENCFF581HPR bed narrowPeak conservative idr thresholded peaks ENCSR550HCT ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-KLF1-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF001TDO, ENCFF255LGM, ENCFF830SMA, ENCFF842XXA 164735 ENCODE Processing Pipeline 117180912cb7d5c4f8bb975ca6ee83f9 https://www.encodeproject.org/files/ENCFF581HPR/@@download/ENCFF581HPR.bed.gz hg19 released missing genetic modification characterization missing control alignments ENCFF842XXA bed narrowPeak peaks ENCSR550HCT ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-KLF1-human ENCAB728YTO DNA False 2016-01-14 ENCODE 2 ENCFF630NYB, ENCFF675KUA 6676264 ENCODE Processing Pipeline f94f0bcb0b973bf3126547a8d5a59a2e https://www.encodeproject.org/files/ENCFF842XXA/@@download/ENCFF842XXA.bed.gz hg19 released missing genetic modification characterization missing control alignments ENCFF807QDY bigBed narrowPeak peaks ENCSR550HCT ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-KLF1-human ENCAB728YTO DNA False 2016-01-14 ENCODE 2 ENCFF842XXA 13211365 ENCODE Processing Pipeline 726cf40a8a15c3d8c6d245dba61b93ad https://www.encodeproject.org/files/ENCFF807QDY/@@download/ENCFF807QDY.bigBed hg19 released missing genetic modification characterization missing control alignments ENCFF717TWA bed narrowPeak optimal idr thresholded peaks ENCSR550HCT ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-KLF1-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF001TDO, ENCFF255LGM, ENCFF830SMA, ENCFF842XXA 221756 ENCODE Processing Pipeline d6e556ebcba694582483815e5740993f https://www.encodeproject.org/files/ENCFF717TWA/@@download/ENCFF717TWA.bed.gz hg19 released missing genetic modification characterization missing control alignments ENCFF837CJW fastq reads ENCSR221GAN ChIP-seq EFO:0002067 K562 cell line Homo sapiens MBD2-human ENCAB000BQP DNA False 2016-06-28 ENCODE 1 1 50 single-ended 1474769152 Richard Myers, HAIB 89ee21b642c0f77058acd7f98fe32bd0 SRA:SRR5331450 https://www.encodeproject.org/files/ENCFF837CJW/@@download/ENCFF837CJW.fastq.gz Illumina HiSeq 2000 /files/ENCFF002BGC/ released low read depth ENCFF945WVN fastq reads ENCSR221GAN ChIP-seq EFO:0002067 K562 cell line Homo sapiens MBD2-human ENCAB000BQP DNA False 2016-06-28 ENCODE 3 1 50 single-ended 1224213428 Richard Myers, HAIB 551bc9f86021cb7c2b3f21b90e5a7235 SRA:SRR5331449 https://www.encodeproject.org/files/ENCFF945WVN/@@download/ENCFF945WVN.fastq.gz Illumina HiSeq 2000 /files/ENCFF002BGB/ released low read depth ENCFF267EKF bam alignments ENCSR221GAN ChIP-seq EFO:0002067 K562 cell line Homo sapiens MBD2-human ENCAB000BQP DNA False 2016-06-28 ENCODE 1 ENCFF807MUK, ENCFF837CJW 1197006611 ENCODE Processing Pipeline b89de83e8fc571eab5cda8b05ffa831c https://www.encodeproject.org/files/ENCFF267EKF/@@download/ENCFF267EKF.bam hg19 released low read depth ENCFF182CYB bam alignments ENCSR221GAN ChIP-seq EFO:0002067 K562 cell line Homo sapiens MBD2-human ENCAB000BQP DNA False 2016-06-28 ENCODE 3 ENCFF807MUK, ENCFF945WVN 990833683 ENCODE Processing Pipeline 0897c9e30bee2316802f4b65e0a57160 https://www.encodeproject.org/files/ENCFF182CYB/@@download/ENCFF182CYB.bam hg19 released low read depth ENCFF139KEU bam unfiltered alignments ENCSR221GAN ChIP-seq EFO:0002067 K562 cell line Homo sapiens MBD2-human ENCAB000BQP DNA False 2016-06-28 ENCODE 3 50 ENCFF807MUK, ENCFF945WVN 1305197221 ENCODE Processing Pipeline 6ce450330426a6292c60241664ff494e https://www.encodeproject.org/files/ENCFF139KEU/@@download/ENCFF139KEU.bam hg19 released low read depth ENCFF388AJM bam alignments ENCSR221GAN ChIP-seq EFO:0002067 K562 cell line Homo sapiens MBD2-human ENCAB000BQP DNA False 2016-06-28 ENCODE 1 50 ENCFF807MUK, ENCFF837CJW 1197006639 ENCODE Processing Pipeline a39959fe10304481284280185474db1d https://www.encodeproject.org/files/ENCFF388AJM/@@download/ENCFF388AJM.bam hg19 released low read depth ENCFF835NGP bam unfiltered alignments ENCSR221GAN ChIP-seq EFO:0002067 K562 cell line Homo sapiens MBD2-human ENCAB000BQP DNA False 2016-06-28 ENCODE 1 50 ENCFF807MUK, ENCFF837CJW 1570382173 ENCODE Processing Pipeline f7c7710f06d1cd98bea532285423de20 https://www.encodeproject.org/files/ENCFF835NGP/@@download/ENCFF835NGP.bam hg19 released low read depth ENCFF057WPZ bam alignments ENCSR221GAN ChIP-seq EFO:0002067 K562 cell line Homo sapiens MBD2-human ENCAB000BQP DNA False 2016-06-28 ENCODE 3 50 ENCFF807MUK, ENCFF945WVN 990833712 ENCODE Processing Pipeline 378bea0563dbf50eebfa8eef9303708b https://www.encodeproject.org/files/ENCFF057WPZ/@@download/ENCFF057WPZ.bam hg19 released low read depth ENCFF530FQE bigWig signal p-value ENCSR221GAN ChIP-seq EFO:0002067 K562 cell line Homo sapiens MBD2-human ENCAB000BQP DNA False 2016-06-28 ENCODE 1 ENCFF023YMB, ENCFF388AJM 652331562 ENCODE Processing Pipeline d651a93a71f509c2602de6e5797e1e9e https://www.encodeproject.org/files/ENCFF530FQE/@@download/ENCFF530FQE.bigWig hg19 released low read depth ENCFF126ZZJ bigWig signal p-value ENCSR221GAN ChIP-seq EFO:0002067 K562 cell line Homo sapiens MBD2-human ENCAB000BQP DNA False 2016-06-28 ENCODE 3 ENCFF057WPZ, ENCFF092ACZ 606608926 ENCODE Processing Pipeline 4513df82eafa53c70e4cb37e32ff89df https://www.encodeproject.org/files/ENCFF126ZZJ/@@download/ENCFF126ZZJ.bigWig hg19 released low read depth ENCFF702ZXJ bigWig signal p-value ENCSR221GAN ChIP-seq EFO:0002067 K562 cell line Homo sapiens MBD2-human ENCAB000BQP DNA False 2016-06-28 ENCODE 1, 3 ENCFF023YMB, ENCFF057WPZ, ENCFF092ACZ, ENCFF388AJM 1002237612 ENCODE Processing Pipeline 6743fe3cc50ad82b5cdcd7fbb2b4dd94 https://www.encodeproject.org/files/ENCFF702ZXJ/@@download/ENCFF702ZXJ.bigWig hg19 released low read depth ENCFF652VZZ bigBed narrowPeak peaks ENCSR221GAN ChIP-seq EFO:0002067 K562 cell line Homo sapiens MBD2-human ENCAB000BQP DNA False 2016-06-28 ENCODE 3 ENCFF939VGO 11116183 ENCODE Processing Pipeline a6238b649792c55897d9d4284c9b3415 https://www.encodeproject.org/files/ENCFF652VZZ/@@download/ENCFF652VZZ.bigBed hg19 released low read depth ENCFF826XEI bigBed narrowPeak peaks ENCSR221GAN ChIP-seq EFO:0002067 K562 cell line Homo sapiens MBD2-human ENCAB000BQP DNA False 2016-06-28 ENCODE 1, 3 ENCFF649MHK 13282217 ENCODE Processing Pipeline d681ce5ffc54e7c5b4c196f41bb45381 https://www.encodeproject.org/files/ENCFF826XEI/@@download/ENCFF826XEI.bigBed hg19 released low read depth ENCFF152PKU bigWig fold change over control ENCSR221GAN ChIP-seq EFO:0002067 K562 cell line Homo sapiens MBD2-human ENCAB000BQP DNA False 2016-06-28 ENCODE 1 ENCFF023YMB, ENCFF388AJM 549601057 ENCODE Processing Pipeline 85fa9b8634833af3985c7c7715b684e2 https://www.encodeproject.org/files/ENCFF152PKU/@@download/ENCFF152PKU.bigWig hg19 released low read depth ENCFF240IEH bigWig fold change over control ENCSR221GAN ChIP-seq EFO:0002067 K562 cell line Homo sapiens MBD2-human ENCAB000BQP DNA False 2016-06-28 ENCODE 3 ENCFF057WPZ, ENCFF092ACZ 472794917 ENCODE Processing Pipeline aa8cce57d1c3715c09eae1c9360319a1 https://www.encodeproject.org/files/ENCFF240IEH/@@download/ENCFF240IEH.bigWig hg19 released low read depth ENCFF935RWY bed narrowPeak peaks ENCSR221GAN ChIP-seq EFO:0002067 K562 cell line Homo sapiens MBD2-human ENCAB000BQP DNA False 2016-06-28 ENCODE 1 ENCFF023YMB, ENCFF388AJM 6270021 ENCODE Processing Pipeline dbc92775e620277e3b12ed79fdb72198 https://www.encodeproject.org/files/ENCFF935RWY/@@download/ENCFF935RWY.bed.gz hg19 released low read depth ENCFF371KUO bigWig fold change over control ENCSR221GAN ChIP-seq EFO:0002067 K562 cell line Homo sapiens MBD2-human ENCAB000BQP DNA False 2016-06-28 ENCODE 1, 3 ENCFF023YMB, ENCFF057WPZ, ENCFF092ACZ, ENCFF388AJM 1080701487 ENCODE Processing Pipeline f93db66264d53d87c6b94a41670e2ad5 https://www.encodeproject.org/files/ENCFF371KUO/@@download/ENCFF371KUO.bigWig hg19 released low read depth ENCFF939VGO bed narrowPeak peaks ENCSR221GAN ChIP-seq EFO:0002067 K562 cell line Homo sapiens MBD2-human ENCAB000BQP DNA False 2016-06-28 ENCODE 3 ENCFF057WPZ, ENCFF092ACZ 5334856 ENCODE Processing Pipeline eff79c853adca22eacf0d0f889aabc8d https://www.encodeproject.org/files/ENCFF939VGO/@@download/ENCFF939VGO.bed.gz hg19 released low read depth ENCFF649MHK bed narrowPeak peaks ENCSR221GAN ChIP-seq EFO:0002067 K562 cell line Homo sapiens MBD2-human ENCAB000BQP DNA False 2016-06-28 ENCODE 1, 3 ENCFF023YMB, ENCFF057WPZ, ENCFF092ACZ, ENCFF388AJM 6815016 ENCODE Processing Pipeline 1e97055946a0cdc1b6155530135a8074 https://www.encodeproject.org/files/ENCFF649MHK/@@download/ENCFF649MHK.bed.gz hg19 released low read depth ENCFF997ADV bigBed narrowPeak optimal idr thresholded peaks ENCSR221GAN ChIP-seq EFO:0002067 K562 cell line Homo sapiens MBD2-human ENCAB000BQP DNA False 2016-06-28 ENCODE 1, 3 ENCFF470MLY 490868 ENCODE Processing Pipeline 72b5778e871ec3306a7bd31b801877c2 https://www.encodeproject.org/files/ENCFF997ADV/@@download/ENCFF997ADV.bigBed hg19 released low read depth ENCFF737YFG bigBed narrowPeak peaks ENCSR221GAN ChIP-seq EFO:0002067 K562 cell line Homo sapiens MBD2-human ENCAB000BQP DNA False 2016-06-28 ENCODE 1 ENCFF935RWY 13058925 ENCODE Processing Pipeline b1816d637fa6c1a2f705949c326ab8e7 https://www.encodeproject.org/files/ENCFF737YFG/@@download/ENCFF737YFG.bigBed hg19 released low read depth ENCFF459ESZ bigBed narrowPeak conservative idr thresholded peaks ENCSR221GAN ChIP-seq EFO:0002067 K562 cell line Homo sapiens MBD2-human ENCAB000BQP DNA False 2016-06-28 ENCODE 1, 3 ENCFF496CSN 401109 ENCODE Processing Pipeline 10d0a6887f56baf530d97db05f0c9d6b https://www.encodeproject.org/files/ENCFF459ESZ/@@download/ENCFF459ESZ.bigBed hg19 released low read depth ENCFF496CSN bed narrowPeak conservative idr thresholded peaks ENCSR221GAN ChIP-seq EFO:0002067 K562 cell line Homo sapiens MBD2-human ENCAB000BQP DNA False 2016-06-28 ENCODE 1, 3 ENCFF001TDO, ENCFF649MHK, ENCFF935RWY, ENCFF939VGO 196970 ENCODE Processing Pipeline 5879d9de68c11d1bf13234fc432a76b8 https://www.encodeproject.org/files/ENCFF496CSN/@@download/ENCFF496CSN.bed.gz hg19 released low read depth ENCFF470MLY bed narrowPeak optimal idr thresholded peaks ENCSR221GAN ChIP-seq EFO:0002067 K562 cell line Homo sapiens MBD2-human ENCAB000BQP DNA False 2016-06-28 ENCODE 1, 3 ENCFF001TDO, ENCFF649MHK, ENCFF935RWY, ENCFF939VGO 263596 ENCODE Processing Pipeline 4deea444df0f55717f0b9f7d26c0db9b https://www.encodeproject.org/files/ENCFF470MLY/@@download/ENCFF470MLY.bed.gz hg19 released low read depth ENCFF833BLL bam unfiltered alignments ENCSR221GAN ChIP-seq EFO:0002067 K562 cell line Homo sapiens MBD2-human ENCAB000BQP DNA False 2016-06-28 ENCODE 3 50 ENCFF643CGH, ENCFF945WVN 1309278408 ENCODE Processing Pipeline ccd8da4414182b10b33b086557d5cb7b https://www.encodeproject.org/files/ENCFF833BLL/@@download/ENCFF833BLL.bam GRCh38 released low read depth ENCFF665BZJ bam unfiltered alignments ENCSR221GAN ChIP-seq EFO:0002067 K562 cell line Homo sapiens MBD2-human ENCAB000BQP DNA False 2016-06-28 ENCODE 1 50 ENCFF643CGH, ENCFF837CJW 1573285455 ENCODE Processing Pipeline 1c86c8ac828f3b343376d166255a00d9 https://www.encodeproject.org/files/ENCFF665BZJ/@@download/ENCFF665BZJ.bam GRCh38 released low read depth ENCFF502VUK bam alignments ENCSR221GAN ChIP-seq EFO:0002067 K562 cell line Homo sapiens MBD2-human ENCAB000BQP DNA False 2016-06-28 ENCODE 3 50 ENCFF643CGH, ENCFF945WVN 990487143 ENCODE Processing Pipeline 776ec5ffba48125a1209d1e5f9acd002 https://www.encodeproject.org/files/ENCFF502VUK/@@download/ENCFF502VUK.bam GRCh38 released low read depth ENCFF655OEX bam alignments ENCSR221GAN ChIP-seq EFO:0002067 K562 cell line Homo sapiens MBD2-human ENCAB000BQP DNA False 2016-06-28 ENCODE 1 50 ENCFF643CGH, ENCFF837CJW 1196518197 ENCODE Processing Pipeline 28498adc3fb4a61e83d1f7ea479c57e8 https://www.encodeproject.org/files/ENCFF655OEX/@@download/ENCFF655OEX.bam GRCh38 released low read depth ENCFF266MVF bigWig signal p-value ENCSR221GAN ChIP-seq EFO:0002067 K562 cell line Homo sapiens MBD2-human ENCAB000BQP DNA False 2016-06-28 ENCODE 1 ENCFF655OEX, ENCFF709XAA 747864284 ENCODE Processing Pipeline d80dc622b8b2ed308cfb9f6d67e0392a https://www.encodeproject.org/files/ENCFF266MVF/@@download/ENCFF266MVF.bigWig GRCh38 released low read depth ENCFF706DMF bigWig signal p-value ENCSR221GAN ChIP-seq EFO:0002067 K562 cell line Homo sapiens MBD2-human ENCAB000BQP DNA False 2016-06-28 ENCODE 3 ENCFF285EWB, ENCFF502VUK 539476812 ENCODE Processing Pipeline f67e435a1c0720a1703657aa858bef32 https://www.encodeproject.org/files/ENCFF706DMF/@@download/ENCFF706DMF.bigWig GRCh38 released low read depth ENCFF510BMM bigWig signal p-value ENCSR221GAN ChIP-seq EFO:0002067 K562 cell line Homo sapiens MBD2-human ENCAB000BQP DNA False 2016-06-28 ENCODE 1, 3 ENCFF285EWB, ENCFF502VUK, ENCFF655OEX, ENCFF709XAA 1105822559 ENCODE Processing Pipeline cf165b4dbb6802ad229f8a598093d238 https://www.encodeproject.org/files/ENCFF510BMM/@@download/ENCFF510BMM.bigWig GRCh38 released low read depth ENCFF714RDN bigWig fold change over control ENCSR221GAN ChIP-seq EFO:0002067 K562 cell line Homo sapiens MBD2-human ENCAB000BQP DNA False 2016-06-28 ENCODE 1 ENCFF655OEX, ENCFF709XAA 549481833 ENCODE Processing Pipeline e53caee8efdbd0468d71d930272cc4df https://www.encodeproject.org/files/ENCFF714RDN/@@download/ENCFF714RDN.bigWig GRCh38 released low read depth ENCFF211CUZ bigWig fold change over control ENCSR221GAN ChIP-seq EFO:0002067 K562 cell line Homo sapiens MBD2-human ENCAB000BQP DNA False 2016-06-28 ENCODE 3 ENCFF285EWB, ENCFF502VUK 453709870 ENCODE Processing Pipeline 8e7b941ff2e7c5e7304cd2bd60aec504 https://www.encodeproject.org/files/ENCFF211CUZ/@@download/ENCFF211CUZ.bigWig GRCh38 released low read depth ENCFF205QAK bigWig fold change over control ENCSR221GAN ChIP-seq EFO:0002067 K562 cell line Homo sapiens MBD2-human ENCAB000BQP DNA False 2016-06-28 ENCODE 1, 3 ENCFF285EWB, ENCFF502VUK, ENCFF655OEX, ENCFF709XAA 1087193107 ENCODE Processing Pipeline e98ec5179a327280c21aad0ec5c30dbb https://www.encodeproject.org/files/ENCFF205QAK/@@download/ENCFF205QAK.bigWig GRCh38 released low read depth ENCFF786NME bed narrowPeak peaks ENCSR221GAN ChIP-seq EFO:0002067 K562 cell line Homo sapiens MBD2-human ENCAB000BQP DNA False 2016-06-28 ENCODE 1, 3 ENCFF285EWB, ENCFF502VUK, ENCFF655OEX, ENCFF709XAA 6686514 ENCODE Processing Pipeline 8313c07392a735e4c4825a41653894af https://www.encodeproject.org/files/ENCFF786NME/@@download/ENCFF786NME.bed.gz GRCh38 released low read depth ENCFF183QZB bed narrowPeak peaks ENCSR221GAN ChIP-seq EFO:0002067 K562 cell line Homo sapiens MBD2-human ENCAB000BQP DNA False 2016-06-28 ENCODE 1 ENCFF655OEX, ENCFF709XAA 6067722 ENCODE Processing Pipeline 4d460eb19f03963eb9813170043022c0 https://www.encodeproject.org/files/ENCFF183QZB/@@download/ENCFF183QZB.bed.gz GRCh38 released low read depth ENCFF674UBG bed narrowPeak peaks ENCSR221GAN ChIP-seq EFO:0002067 K562 cell line Homo sapiens MBD2-human ENCAB000BQP DNA False 2016-06-28 ENCODE 3 ENCFF285EWB, ENCFF502VUK 5142366 ENCODE Processing Pipeline b9435d56291e10aac952795e0061b933 https://www.encodeproject.org/files/ENCFF674UBG/@@download/ENCFF674UBG.bed.gz GRCh38 released low read depth ENCFF055NYF bigBed narrowPeak peaks ENCSR221GAN ChIP-seq EFO:0002067 K562 cell line Homo sapiens MBD2-human ENCAB000BQP DNA False 2016-06-28 ENCODE 1 ENCFF183QZB 13044498 ENCODE Processing Pipeline 7ccdff8f449b91756442a012b069b848 https://www.encodeproject.org/files/ENCFF055NYF/@@download/ENCFF055NYF.bigBed GRCh38 released low read depth ENCFF332FKV bigBed narrowPeak conservative idr thresholded peaks ENCSR221GAN ChIP-seq EFO:0002067 K562 cell line Homo sapiens MBD2-human ENCAB000BQP DNA False 2016-06-28 ENCODE 1, 3 ENCFF768YPD 408205 ENCODE Processing Pipeline 36bbf2c76f4bbab6aa1c50a00a8104c3 https://www.encodeproject.org/files/ENCFF332FKV/@@download/ENCFF332FKV.bigBed GRCh38 released low read depth ENCFF768YPD bed narrowPeak conservative idr thresholded peaks ENCSR221GAN ChIP-seq EFO:0002067 K562 cell line Homo sapiens MBD2-human ENCAB000BQP DNA False 2016-06-28 ENCODE 1, 3 ENCFF183QZB, ENCFF419RSJ, ENCFF674UBG, ENCFF786NME 200845 ENCODE Processing Pipeline 076cba5a53b9d3e8cfedd0606cdc0985 https://www.encodeproject.org/files/ENCFF768YPD/@@download/ENCFF768YPD.bed.gz GRCh38 released low read depth ENCFF467FYE bigBed narrowPeak peaks ENCSR221GAN ChIP-seq EFO:0002067 K562 cell line Homo sapiens MBD2-human ENCAB000BQP DNA False 2016-06-28 ENCODE 3 ENCFF674UBG 11028380 ENCODE Processing Pipeline 007d5e26b684cc019525c53cd5047cc8 https://www.encodeproject.org/files/ENCFF467FYE/@@download/ENCFF467FYE.bigBed GRCh38 released low read depth ENCFF617QSK bed narrowPeak optimal idr thresholded peaks ENCSR221GAN ChIP-seq EFO:0002067 K562 cell line Homo sapiens MBD2-human ENCAB000BQP DNA False 2016-06-28 ENCODE 1, 3 ENCFF183QZB, ENCFF419RSJ, ENCFF674UBG, ENCFF786NME 266336 ENCODE Processing Pipeline 046b782ea7920ad8889abd52fee8102b https://www.encodeproject.org/files/ENCFF617QSK/@@download/ENCFF617QSK.bed.gz GRCh38 released low read depth ENCFF940VXW bigBed narrowPeak optimal idr thresholded peaks ENCSR221GAN ChIP-seq EFO:0002067 K562 cell line Homo sapiens MBD2-human ENCAB000BQP DNA False 2016-06-28 ENCODE 1, 3 ENCFF617QSK 496603 ENCODE Processing Pipeline 94a05286a4eea0a0e1a7fd448f0bf252 https://www.encodeproject.org/files/ENCFF940VXW/@@download/ENCFF940VXW.bigBed GRCh38 released low read depth ENCFF944YCP bigBed narrowPeak peaks ENCSR221GAN ChIP-seq EFO:0002067 K562 cell line Homo sapiens MBD2-human ENCAB000BQP DNA False 2016-06-28 ENCODE 1, 3 ENCFF786NME 13308475 ENCODE Processing Pipeline 10f88ed321156694a5570b216eb10ffe https://www.encodeproject.org/files/ENCFF944YCP/@@download/ENCFF944YCP.bigBed GRCh38 released low read depth ENCFF539SVN fastq reads ENCSR014RCS ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPK-human ENCAB000BFN DNA SDS formaldehyde False 2018-01-19 ENCODE 1 1 40 single-ended 412353904 Xiang-Dong Fu, UCSD 178e61899b096aeac9c6505473060737 https://www.encodeproject.org/files/ENCFF539SVN/@@download/ENCFF539SVN.fastq.gz Illumina HiSeq 2000 /files/ENCFF439OMO/ released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, insufficient read depth, severe bottlenecking ENCFF455MEZ fastq reads ENCSR014RCS ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPK-human ENCAB000BFN DNA SDS formaldehyde False 2018-01-19 ENCODE 2 1 40 single-ended 374046231 Xiang-Dong Fu, UCSD 8ac973aee70dbef9b2f59740cb67af6a https://www.encodeproject.org/files/ENCFF455MEZ/@@download/ENCFF455MEZ.fastq.gz Illumina HiSeq 2000 /files/ENCFF087SCF/ released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, insufficient read depth, severe bottlenecking ENCFF405TWQ fastq reads ENCSR014RCS ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPK-human ENCAB000BFN DNA SDS formaldehyde False 2018-01-19 ENCODE 1 1 40 single-ended 1562961604 Xiang-Dong Fu, UCSD c21578d3f10166d633c12d745fba6b60 https://www.encodeproject.org/files/ENCFF405TWQ/@@download/ENCFF405TWQ.fastq.gz Illumina HiSeq 2500 /files/ENCFF439OMO/ released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, insufficient read depth, severe bottlenecking ENCFF426HJF fastq reads ENCSR014RCS ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPK-human ENCAB000BFN DNA SDS formaldehyde False 2018-01-19 ENCODE 2 1 40 single-ended 1708262437 Xiang-Dong Fu, UCSD fa0a5d0be4a33011516b5c3a27a1940c https://www.encodeproject.org/files/ENCFF426HJF/@@download/ENCFF426HJF.fastq.gz Illumina HiSeq 2500 /files/ENCFF087SCF/ released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, insufficient read depth, severe bottlenecking ENCFF860WYW bam unfiltered alignments ENCSR014RCS ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPK-human ENCAB000BFN DNA SDS formaldehyde False 2018-01-19 ENCODE 2 40 ENCFF426HJF, ENCFF455MEZ, ENCFF643CGH 2007804806 ENCODE Processing Pipeline 99fb35b0801e20ac6f73b9c105b1a41c https://www.encodeproject.org/files/ENCFF860WYW/@@download/ENCFF860WYW.bam GRCh38 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, insufficient read depth, severe bottlenecking ENCFF588GTL bam alignments ENCSR014RCS ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPK-human ENCAB000BFN DNA SDS formaldehyde False 2018-01-19 ENCODE 2 40 ENCFF426HJF, ENCFF455MEZ, ENCFF643CGH 372158885 ENCODE Processing Pipeline 4e6e402fd9cb1b4d591048fe8bac60c3 https://www.encodeproject.org/files/ENCFF588GTL/@@download/ENCFF588GTL.bam GRCh38 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, insufficient read depth, severe bottlenecking ENCFF913ATA bam unfiltered alignments ENCSR014RCS ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPK-human ENCAB000BFN DNA SDS formaldehyde False 2018-01-19 ENCODE 1 40 ENCFF405TWQ, ENCFF539SVN, ENCFF643CGH 1916764759 ENCODE Processing Pipeline 865728bca27ef2c4dd798f06bdc444d9 https://www.encodeproject.org/files/ENCFF913ATA/@@download/ENCFF913ATA.bam GRCh38 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, insufficient read depth, severe bottlenecking ENCFF714PRB bam unfiltered alignments ENCSR014RCS ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPK-human ENCAB000BFN DNA SDS formaldehyde False 2018-01-19 ENCODE 1 40 ENCFF405TWQ, ENCFF539SVN, ENCFF807MUK 1907435077 ENCODE Processing Pipeline 89bbd9740812f1b2642c94307c692383 https://www.encodeproject.org/files/ENCFF714PRB/@@download/ENCFF714PRB.bam hg19 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, insufficient read depth, severe bottlenecking ENCFF760WGC bam alignments ENCSR014RCS ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPK-human ENCAB000BFN DNA SDS formaldehyde False 2018-01-19 ENCODE 1 40 ENCFF405TWQ, ENCFF539SVN, ENCFF643CGH 413222457 ENCODE Processing Pipeline 9b206d6f7c197adc9503d117b1811538 https://www.encodeproject.org/files/ENCFF760WGC/@@download/ENCFF760WGC.bam GRCh38 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, insufficient read depth, severe bottlenecking ENCFF152TEK bam alignments ENCSR014RCS ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPK-human ENCAB000BFN DNA SDS formaldehyde False 2018-01-19 ENCODE 1 40 ENCFF405TWQ, ENCFF539SVN, ENCFF807MUK 413729962 ENCODE Processing Pipeline d2e401d1b0d7c5a3348cd237c2b7f59a https://www.encodeproject.org/files/ENCFF152TEK/@@download/ENCFF152TEK.bam hg19 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, insufficient read depth, severe bottlenecking ENCFF262VMC bam unfiltered alignments ENCSR014RCS ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPK-human ENCAB000BFN DNA SDS formaldehyde False 2018-01-19 ENCODE 2 40 ENCFF426HJF, ENCFF455MEZ, ENCFF807MUK 1998151979 ENCODE Processing Pipeline e14e1dfc1901b7572cc61a6c5eb9a1c0 https://www.encodeproject.org/files/ENCFF262VMC/@@download/ENCFF262VMC.bam hg19 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, insufficient read depth, severe bottlenecking ENCFF584SKU bam alignments ENCSR014RCS ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPK-human ENCAB000BFN DNA SDS formaldehyde False 2018-01-19 ENCODE 2 40 ENCFF426HJF, ENCFF455MEZ, ENCFF807MUK 372645427 ENCODE Processing Pipeline b8875887b69057cbe546b12a7c9056a2 https://www.encodeproject.org/files/ENCFF584SKU/@@download/ENCFF584SKU.bam hg19 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, insufficient read depth, severe bottlenecking ENCFF854OYD bigWig fold change over control ENCSR014RCS ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPK-human ENCAB000BFN DNA SDS formaldehyde False 2018-01-19 ENCODE 1, 2 ENCFF375ZQH, ENCFF588GTL, ENCFF760WGC, ENCFF819KWY 684449634 ENCODE Processing Pipeline f7d9cbbb57ca0aa2d58c7a50c3c63654 https://www.encodeproject.org/files/ENCFF854OYD/@@download/ENCFF854OYD.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, insufficient read depth, severe bottlenecking ENCFF706ZDC bed narrowPeak peaks ENCSR014RCS ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPK-human ENCAB000BFN DNA SDS formaldehyde False 2018-01-19 ENCODE 1 ENCFF760WGC, ENCFF819KWY 5400865 ENCODE Processing Pipeline 695f1b9f6228ae14903a7f0d3ab9d5f5 https://www.encodeproject.org/files/ENCFF706ZDC/@@download/ENCFF706ZDC.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, insufficient read depth, severe bottlenecking ENCFF456YPY bigBed narrowPeak peaks ENCSR014RCS ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPK-human ENCAB000BFN DNA SDS formaldehyde False 2018-01-19 ENCODE 2 ENCFF052YKV 13259969 ENCODE Processing Pipeline 3d5ee547a988fd6e41fe6d2d683eb3a1 https://www.encodeproject.org/files/ENCFF456YPY/@@download/ENCFF456YPY.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, insufficient read depth, severe bottlenecking ENCFF889ZXM bigBed narrowPeak peaks ENCSR014RCS ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPK-human ENCAB000BFN DNA SDS formaldehyde False 2018-01-19 ENCODE 1, 2 ENCFF054IHO 13466507 ENCODE Processing Pipeline 85c284cd708a8d658a36da31fea6b94e https://www.encodeproject.org/files/ENCFF889ZXM/@@download/ENCFF889ZXM.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, insufficient read depth, severe bottlenecking ENCFF320ORV bigWig fold change over control ENCSR014RCS ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPK-human ENCAB000BFN DNA SDS formaldehyde False 2018-01-19 ENCODE 1 ENCFF760WGC, ENCFF819KWY 321764044 ENCODE Processing Pipeline 41cfb1b0e23e8b3d6bdf9675ab99da99 https://www.encodeproject.org/files/ENCFF320ORV/@@download/ENCFF320ORV.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, insufficient read depth, severe bottlenecking ENCFF589EVC bigWig signal p-value ENCSR014RCS ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPK-human ENCAB000BFN DNA SDS formaldehyde False 2018-01-19 ENCODE 2 ENCFF375ZQH, ENCFF588GTL 518644927 ENCODE Processing Pipeline c171c396421d33961e9902d6d90f490f https://www.encodeproject.org/files/ENCFF589EVC/@@download/ENCFF589EVC.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, insufficient read depth, severe bottlenecking ENCFF550AVU bed narrowPeak conservative idr thresholded peaks ENCSR014RCS ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPK-human ENCAB000BFN DNA SDS formaldehyde False 2018-01-19 ENCODE 1, 2 ENCFF052YKV, ENCFF054IHO, ENCFF419RSJ, ENCFF706ZDC 188795 ENCODE Processing Pipeline 09aec6db7836b9236284a5c7be5630db https://www.encodeproject.org/files/ENCFF550AVU/@@download/ENCFF550AVU.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, insufficient read depth, severe bottlenecking ENCFF052YKV bed narrowPeak peaks ENCSR014RCS ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPK-human ENCAB000BFN DNA SDS formaldehyde False 2018-01-19 ENCODE 2 ENCFF375ZQH, ENCFF588GTL 5314610 ENCODE Processing Pipeline 0cf2753438fb4d6d54ba68e3014cd43a https://www.encodeproject.org/files/ENCFF052YKV/@@download/ENCFF052YKV.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, insufficient read depth, severe bottlenecking ENCFF054IHO bed narrowPeak peaks ENCSR014RCS ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPK-human ENCAB000BFN DNA SDS formaldehyde False 2018-01-19 ENCODE 1, 2 ENCFF375ZQH, ENCFF588GTL, ENCFF760WGC, ENCFF819KWY 6819149 ENCODE Processing Pipeline 3e55910e754ce5e50ef70a31478858db https://www.encodeproject.org/files/ENCFF054IHO/@@download/ENCFF054IHO.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, insufficient read depth, severe bottlenecking ENCFF998MVM bigWig signal p-value ENCSR014RCS ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPK-human ENCAB000BFN DNA SDS formaldehyde False 2018-01-19 ENCODE 1 ENCFF760WGC, ENCFF819KWY 519989529 ENCODE Processing Pipeline 4fdd75542ec0651e0671360798b015fd https://www.encodeproject.org/files/ENCFF998MVM/@@download/ENCFF998MVM.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, insufficient read depth, severe bottlenecking ENCFF584FXT bigWig signal p-value ENCSR014RCS ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPK-human ENCAB000BFN DNA SDS formaldehyde False 2018-01-19 ENCODE 1, 2 ENCFF375ZQH, ENCFF588GTL, ENCFF760WGC, ENCFF819KWY 869296228 ENCODE Processing Pipeline dd0d2a48f49cc3dc3ea21af27443e0af https://www.encodeproject.org/files/ENCFF584FXT/@@download/ENCFF584FXT.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, insufficient read depth, severe bottlenecking ENCFF900MON bigWig fold change over control ENCSR014RCS ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPK-human ENCAB000BFN DNA SDS formaldehyde False 2018-01-19 ENCODE 2 ENCFF375ZQH, ENCFF588GTL 290628728 ENCODE Processing Pipeline 9b07df80f711ef21e601315770115411 https://www.encodeproject.org/files/ENCFF900MON/@@download/ENCFF900MON.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, insufficient read depth, severe bottlenecking ENCFF369OVQ bigBed narrowPeak peaks ENCSR014RCS ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPK-human ENCAB000BFN DNA SDS formaldehyde False 2018-01-19 ENCODE 1 ENCFF706ZDC 13327691 ENCODE Processing Pipeline eca19b2bb0de38ce32de1f8af742379f https://www.encodeproject.org/files/ENCFF369OVQ/@@download/ENCFF369OVQ.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, insufficient read depth, severe bottlenecking ENCFF984QUV bed narrowPeak optimal idr thresholded peaks ENCSR014RCS ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPK-human ENCAB000BFN DNA SDS formaldehyde False 2018-01-19 ENCODE 1, 2 ENCFF052YKV, ENCFF054IHO, ENCFF419RSJ, ENCFF706ZDC 194431 ENCODE Processing Pipeline 31321af501f20a997860dd4e431d9053 https://www.encodeproject.org/files/ENCFF984QUV/@@download/ENCFF984QUV.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, insufficient read depth, severe bottlenecking ENCFF421AQS bigBed narrowPeak conservative idr thresholded peaks ENCSR014RCS ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPK-human ENCAB000BFN DNA SDS formaldehyde False 2018-01-19 ENCODE 1, 2 ENCFF550AVU 395440 ENCODE Processing Pipeline 0999dede2e5f0e2f14e8344f22675f16 https://www.encodeproject.org/files/ENCFF421AQS/@@download/ENCFF421AQS.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, insufficient read depth, severe bottlenecking ENCFF237MTB bigBed narrowPeak optimal idr thresholded peaks ENCSR014RCS ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPK-human ENCAB000BFN DNA SDS formaldehyde False 2018-01-19 ENCODE 1, 2 ENCFF984QUV 402748 ENCODE Processing Pipeline 06916ba667724e09e1bc670b32331439 https://www.encodeproject.org/files/ENCFF237MTB/@@download/ENCFF237MTB.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, insufficient read depth, severe bottlenecking ENCFF465JMD bigWig signal p-value ENCSR014RCS ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPK-human ENCAB000BFN DNA SDS formaldehyde False 2018-01-19 ENCODE 1 ENCFF021SBT, ENCFF152TEK 566074862 ENCODE Processing Pipeline 1b502ca92ad0d394bf0c25726a790676 https://www.encodeproject.org/files/ENCFF465JMD/@@download/ENCFF465JMD.bigWig hg19 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, insufficient read depth, severe bottlenecking ENCFF267ADT bigWig fold change over control ENCSR014RCS ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPK-human ENCAB000BFN DNA SDS formaldehyde False 2018-01-19 ENCODE 1 ENCFF021SBT, ENCFF152TEK 300893147 ENCODE Processing Pipeline 4d3f4797be6b5af24223b39a69453b22 https://www.encodeproject.org/files/ENCFF267ADT/@@download/ENCFF267ADT.bigWig hg19 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, insufficient read depth, severe bottlenecking ENCFF733NAT bigWig signal p-value ENCSR014RCS ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPK-human ENCAB000BFN DNA SDS formaldehyde False 2018-01-19 ENCODE 2 ENCFF221JFQ, ENCFF584SKU 506569206 ENCODE Processing Pipeline ef43185532887f64bae64c99477d0491 https://www.encodeproject.org/files/ENCFF733NAT/@@download/ENCFF733NAT.bigWig hg19 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, insufficient read depth, severe bottlenecking ENCFF784XCG bigWig fold change over control ENCSR014RCS ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPK-human ENCAB000BFN DNA SDS formaldehyde False 2018-01-19 ENCODE 2 ENCFF221JFQ, ENCFF584SKU 285558018 ENCODE Processing Pipeline 4432510ff281d9155a23fa3e5679c3c8 https://www.encodeproject.org/files/ENCFF784XCG/@@download/ENCFF784XCG.bigWig hg19 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, insufficient read depth, severe bottlenecking ENCFF754BMR bigWig fold change over control ENCSR014RCS ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPK-human ENCAB000BFN DNA SDS formaldehyde False 2018-01-19 ENCODE 1, 2 ENCFF021SBT, ENCFF152TEK, ENCFF221JFQ, ENCFF584SKU 685435819 ENCODE Processing Pipeline fbbebc33abf482be2e5775261495dbaa https://www.encodeproject.org/files/ENCFF754BMR/@@download/ENCFF754BMR.bigWig hg19 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, insufficient read depth, severe bottlenecking ENCFF253OJD bigBed narrowPeak peaks ENCSR014RCS ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPK-human ENCAB000BFN DNA SDS formaldehyde False 2018-01-19 ENCODE 1 ENCFF439JKZ 13302002 ENCODE Processing Pipeline 3e61a3fd286293e9074b855b9cd1ca19 https://www.encodeproject.org/files/ENCFF253OJD/@@download/ENCFF253OJD.bigBed hg19 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, insufficient read depth, severe bottlenecking ENCFF382ULC bigBed narrowPeak conservative idr thresholded peaks ENCSR014RCS ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPK-human ENCAB000BFN DNA SDS formaldehyde False 2018-01-19 ENCODE 1, 2 ENCFF936IJD 400255 ENCODE Processing Pipeline 5b5bc84d644055ff559b1328456c0688 https://www.encodeproject.org/files/ENCFF382ULC/@@download/ENCFF382ULC.bigBed hg19 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, insufficient read depth, severe bottlenecking ENCFF982ECU bigWig signal p-value ENCSR014RCS ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPK-human ENCAB000BFN DNA SDS formaldehyde False 2018-01-19 ENCODE 1, 2 ENCFF021SBT, ENCFF152TEK, ENCFF221JFQ, ENCFF584SKU 919929932 ENCODE Processing Pipeline 8596686d2512cf93b8c0035cd7597a39 https://www.encodeproject.org/files/ENCFF982ECU/@@download/ENCFF982ECU.bigWig hg19 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, insufficient read depth, severe bottlenecking ENCFF439JKZ bed narrowPeak peaks ENCSR014RCS ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPK-human ENCAB000BFN DNA SDS formaldehyde False 2018-01-19 ENCODE 1 ENCFF021SBT, ENCFF152TEK 5434497 ENCODE Processing Pipeline 59a464a69517252724b7eb1cdfa9d73d https://www.encodeproject.org/files/ENCFF439JKZ/@@download/ENCFF439JKZ.bed.gz hg19 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, insufficient read depth, severe bottlenecking ENCFF477QHE bigBed narrowPeak peaks ENCSR014RCS ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPK-human ENCAB000BFN DNA SDS formaldehyde False 2018-01-19 ENCODE 1, 2 ENCFF409JZE 13487903 ENCODE Processing Pipeline e6d7531c139f271ed272a9dde9003cea https://www.encodeproject.org/files/ENCFF477QHE/@@download/ENCFF477QHE.bigBed hg19 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, insufficient read depth, severe bottlenecking ENCFF936IJD bed narrowPeak conservative idr thresholded peaks ENCSR014RCS ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPK-human ENCAB000BFN DNA SDS formaldehyde False 2018-01-19 ENCODE 1, 2 ENCFF001TDO, ENCFF037LWJ, ENCFF409JZE, ENCFF439JKZ 193151 ENCODE Processing Pipeline 1f6855240c7134024e44b963afae12cf https://www.encodeproject.org/files/ENCFF936IJD/@@download/ENCFF936IJD.bed.gz hg19 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, insufficient read depth, severe bottlenecking ENCFF409JZE bed narrowPeak peaks ENCSR014RCS ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPK-human ENCAB000BFN DNA SDS formaldehyde False 2018-01-19 ENCODE 1, 2 ENCFF021SBT, ENCFF152TEK, ENCFF221JFQ, ENCFF584SKU 6888183 ENCODE Processing Pipeline 3da0ba679e03f44204ce0c1291d1f4ed https://www.encodeproject.org/files/ENCFF409JZE/@@download/ENCFF409JZE.bed.gz hg19 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, insufficient read depth, severe bottlenecking ENCFF399ZFX bigBed narrowPeak optimal idr thresholded peaks ENCSR014RCS ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPK-human ENCAB000BFN DNA SDS formaldehyde False 2018-01-19 ENCODE 1, 2 ENCFF777CWV 408934 ENCODE Processing Pipeline 63627d9843af27b691e3ec6db6fb9298 https://www.encodeproject.org/files/ENCFF399ZFX/@@download/ENCFF399ZFX.bigBed hg19 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, insufficient read depth, severe bottlenecking ENCFF037LWJ bed narrowPeak peaks ENCSR014RCS ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPK-human ENCAB000BFN DNA SDS formaldehyde False 2018-01-19 ENCODE 2 ENCFF221JFQ, ENCFF584SKU 5373755 ENCODE Processing Pipeline 7debde54ef88e8ffa439ba7ffd770114 https://www.encodeproject.org/files/ENCFF037LWJ/@@download/ENCFF037LWJ.bed.gz hg19 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, insufficient read depth, severe bottlenecking ENCFF958BGI bigBed narrowPeak peaks ENCSR014RCS ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPK-human ENCAB000BFN DNA SDS formaldehyde False 2018-01-19 ENCODE 2 ENCFF037LWJ 13256985 ENCODE Processing Pipeline 726aea1273614c8e0e0b483446886dfb https://www.encodeproject.org/files/ENCFF958BGI/@@download/ENCFF958BGI.bigBed hg19 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, insufficient read depth, severe bottlenecking ENCFF777CWV bed narrowPeak optimal idr thresholded peaks ENCSR014RCS ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPK-human ENCAB000BFN DNA SDS formaldehyde False 2018-01-19 ENCODE 1, 2 ENCFF001TDO, ENCFF037LWJ, ENCFF409JZE, ENCFF439JKZ 198809 ENCODE Processing Pipeline 8eacb6c36160d8886684bfef22a5db39 https://www.encodeproject.org/files/ENCFF777CWV/@@download/ENCFF777CWV.bed.gz hg19 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, insufficient read depth, severe bottlenecking ENCFF434ISC fastq reads ENCSR710WLO ChIP-seq EFO:0002067 K562 cell line Homo sapiens MGA-human ENCAB591RYH DNA False 2016-12-19 ENCODE 1 1 100 paired-ended 1 ENCFF105BAY 6181903230 Michael Snyder, Stanford 38e62f950ce79eea002874e4791fd4bb SRA:SRR6213948 https://www.encodeproject.org/files/ENCFF434ISC/@@download/ENCFF434ISC.fastq.gz Illumina HiSeq 4000 /files/ENCFF498JMO/ released mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF194JCS fastq reads ENCSR710WLO ChIP-seq EFO:0002067 K562 cell line Homo sapiens MGA-human ENCAB591RYH DNA False 2016-12-19 ENCODE 2 1 100 paired-ended 1 ENCFF831HED 3172935971 Michael Snyder, Stanford 7c9b99e194fc7a46cd5feac3ae8bf7dc SRA:SRR6213947 https://www.encodeproject.org/files/ENCFF194JCS/@@download/ENCFF194JCS.fastq.gz Illumina HiSeq 4000 /files/ENCFF259GQA/ released mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF831HED fastq reads ENCSR710WLO ChIP-seq EFO:0002067 K562 cell line Homo sapiens MGA-human ENCAB591RYH DNA False 2016-12-19 ENCODE 2 1 100 paired-ended 2 ENCFF194JCS 3480487880 Michael Snyder, Stanford c9d47d7fa1ce583edaa400eaa1a0d76f SRA:SRR6213947 https://www.encodeproject.org/files/ENCFF831HED/@@download/ENCFF831HED.fastq.gz Illumina HiSeq 4000 /files/ENCFF837MIV/ released mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF105BAY fastq reads ENCSR710WLO ChIP-seq EFO:0002067 K562 cell line Homo sapiens MGA-human ENCAB591RYH DNA False 2016-12-19 ENCODE 1 1 100 paired-ended 2 ENCFF434ISC 6669651770 Michael Snyder, Stanford 50d7a0ce73a934ab536c44f9bfa321a8 SRA:SRR6213948 https://www.encodeproject.org/files/ENCFF105BAY/@@download/ENCFF105BAY.fastq.gz Illumina HiSeq 4000 /files/ENCFF502GTS/ released mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF256LJD bam unfiltered alignments ENCSR710WLO ChIP-seq EFO:0002067 K562 cell line Homo sapiens MGA-human ENCAB591RYH DNA False 2016-12-19 ENCODE 2 100 ENCFF194JCS, ENCFF807MUK, ENCFF831HED 6032953602 ENCODE Processing Pipeline 4f2c8748994c80bcfa7340b565fb5e01 https://www.encodeproject.org/files/ENCFF256LJD/@@download/ENCFF256LJD.bam hg19 released mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF099AAR bam unfiltered alignments ENCSR710WLO ChIP-seq EFO:0002067 K562 cell line Homo sapiens MGA-human ENCAB591RYH DNA False 2016-12-19 ENCODE 2 100 ENCFF194JCS, ENCFF643CGH, ENCFF831HED 6035154111 ENCODE Processing Pipeline f41db44dfe0865e56d33a999f1c0b1dd https://www.encodeproject.org/files/ENCFF099AAR/@@download/ENCFF099AAR.bam GRCh38 released mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF207ILO bam alignments ENCSR710WLO ChIP-seq EFO:0002067 K562 cell line Homo sapiens MGA-human ENCAB591RYH DNA False 2016-12-19 ENCODE 2 100 ENCFF194JCS, ENCFF807MUK, ENCFF831HED 3992877850 ENCODE Processing Pipeline 8d471aceeae5c01ab556eabb8bce62f4 https://www.encodeproject.org/files/ENCFF207ILO/@@download/ENCFF207ILO.bam hg19 released mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF066JMV bam alignments ENCSR710WLO ChIP-seq EFO:0002067 K562 cell line Homo sapiens MGA-human ENCAB591RYH DNA False 2016-12-19 ENCODE 2 100 ENCFF194JCS, ENCFF643CGH, ENCFF831HED 3995880451 ENCODE Processing Pipeline 602d8339a1c636309d54d92804819e49 https://www.encodeproject.org/files/ENCFF066JMV/@@download/ENCFF066JMV.bam GRCh38 released mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF796GXD bam unfiltered alignments ENCSR710WLO ChIP-seq EFO:0002067 K562 cell line Homo sapiens MGA-human ENCAB591RYH DNA False 2016-12-19 ENCODE 1 100 ENCFF105BAY, ENCFF434ISC, ENCFF643CGH 11250676388 ENCODE Processing Pipeline 0b79b1bbc0b6f44b1f03a1e68385858f https://www.encodeproject.org/files/ENCFF796GXD/@@download/ENCFF796GXD.bam GRCh38 released mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF663CTR bam unfiltered alignments ENCSR710WLO ChIP-seq EFO:0002067 K562 cell line Homo sapiens MGA-human ENCAB591RYH DNA False 2016-12-19 ENCODE 1 100 ENCFF105BAY, ENCFF434ISC, ENCFF807MUK 11244444056 ENCODE Processing Pipeline 5b9d5588d163c72eef5c2a0391d54a09 https://www.encodeproject.org/files/ENCFF663CTR/@@download/ENCFF663CTR.bam hg19 released mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF981ZOJ bam alignments ENCSR710WLO ChIP-seq EFO:0002067 K562 cell line Homo sapiens MGA-human ENCAB591RYH DNA False 2016-12-19 ENCODE 1 100 ENCFF105BAY, ENCFF434ISC, ENCFF807MUK 8290086838 ENCODE Processing Pipeline 9625cc42ba8c1be17db40749b9cddfaa https://www.encodeproject.org/files/ENCFF981ZOJ/@@download/ENCFF981ZOJ.bam hg19 released mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF330XAC bam alignments ENCSR710WLO ChIP-seq EFO:0002067 K562 cell line Homo sapiens MGA-human ENCAB591RYH DNA False 2016-12-19 ENCODE 1 100 ENCFF105BAY, ENCFF434ISC, ENCFF643CGH 8299455783 ENCODE Processing Pipeline e88564eaf6627e2724a5c6bfa6e93fde https://www.encodeproject.org/files/ENCFF330XAC/@@download/ENCFF330XAC.bam GRCh38 released mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF326EWY bigWig signal p-value ENCSR710WLO ChIP-seq EFO:0002067 K562 cell line Homo sapiens MGA-human ENCAB591RYH DNA False 2016-12-19 ENCODE 1 ENCFF330XAC 2365941813 ENCODE Processing Pipeline 099c6cff8de87a1326d2254af3cad56f https://www.encodeproject.org/files/ENCFF326EWY/@@download/ENCFF326EWY.bigWig GRCh38 released mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF932CDT bigWig signal p-value ENCSR710WLO ChIP-seq EFO:0002067 K562 cell line Homo sapiens MGA-human ENCAB591RYH DNA False 2016-12-19 ENCODE 2 ENCFF066JMV 1335004475 ENCODE Processing Pipeline 9b866ccee5cfff73f0b4c0c13163317a https://www.encodeproject.org/files/ENCFF932CDT/@@download/ENCFF932CDT.bigWig GRCh38 released mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF090HZQ bigWig signal p-value ENCSR710WLO ChIP-seq EFO:0002067 K562 cell line Homo sapiens MGA-human ENCAB591RYH DNA False 2016-12-19 ENCODE 1, 2 ENCFF066JMV, ENCFF330XAC 2364424118 ENCODE Processing Pipeline 5c62f29ae987e2258d714e8229a9c2d2 https://www.encodeproject.org/files/ENCFF090HZQ/@@download/ENCFF090HZQ.bigWig GRCh38 released mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF165THZ bigWig fold change over control ENCSR710WLO ChIP-seq EFO:0002067 K562 cell line Homo sapiens MGA-human ENCAB591RYH DNA False 2016-12-19 ENCODE 1 ENCFF330XAC 2499884362 ENCODE Processing Pipeline 2bc524f6ba3dfbe8f05922c5273fb310 https://www.encodeproject.org/files/ENCFF165THZ/@@download/ENCFF165THZ.bigWig GRCh38 released mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF930DHM bigWig fold change over control ENCSR710WLO ChIP-seq EFO:0002067 K562 cell line Homo sapiens MGA-human ENCAB591RYH DNA False 2016-12-19 ENCODE 2 ENCFF066JMV 1417902474 ENCODE Processing Pipeline 6ffc4aa158da73717e4ccfd547d3c9ad https://www.encodeproject.org/files/ENCFF930DHM/@@download/ENCFF930DHM.bigWig GRCh38 released mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF432FYS bigWig fold change over control ENCSR710WLO ChIP-seq EFO:0002067 K562 cell line Homo sapiens MGA-human ENCAB591RYH DNA False 2016-12-19 ENCODE 1, 2 ENCFF066JMV, ENCFF330XAC 2856334831 ENCODE Processing Pipeline ab87caa8cf27fc1044896a789c5a93bf https://www.encodeproject.org/files/ENCFF432FYS/@@download/ENCFF432FYS.bigWig GRCh38 released mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF557SFL bed narrowPeak conservative idr thresholded peaks ENCSR710WLO ChIP-seq EFO:0002067 K562 cell line Homo sapiens MGA-human ENCAB591RYH DNA False 2016-12-19 ENCODE 1, 2 ENCFF299RHL, ENCFF419RSJ, ENCFF694KSM, ENCFF935HPA 612630 ENCODE Processing Pipeline 6377fbfb5a1139a8f040542e92fca5e3 https://www.encodeproject.org/files/ENCFF557SFL/@@download/ENCFF557SFL.bed.gz GRCh38 released mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF296PRC bigBed narrowPeak conservative idr thresholded peaks ENCSR710WLO ChIP-seq EFO:0002067 K562 cell line Homo sapiens MGA-human ENCAB591RYH DNA False 2016-12-19 ENCODE 1, 2 ENCFF557SFL 1393885 ENCODE Processing Pipeline 53897dfbf6e9ee64de85d68d0cde5534 https://www.encodeproject.org/files/ENCFF296PRC/@@download/ENCFF296PRC.bigBed GRCh38 released mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF525MPI bed narrowPeak optimal idr thresholded peaks ENCSR710WLO ChIP-seq EFO:0002067 K562 cell line Homo sapiens MGA-human ENCAB591RYH DNA False 2016-12-19 ENCODE 1, 2 ENCFF299RHL, ENCFF419RSJ, ENCFF694KSM, ENCFF935HPA 616163 ENCODE Processing Pipeline 771e3875b5bd6a6f256953a6fad4660a https://www.encodeproject.org/files/ENCFF525MPI/@@download/ENCFF525MPI.bed.gz GRCh38 released mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF299RHL bed narrowPeak peaks ENCSR710WLO ChIP-seq EFO:0002067 K562 cell line Homo sapiens MGA-human ENCAB591RYH DNA False 2016-12-19 ENCODE 1 ENCFF330XAC 7262176 ENCODE Processing Pipeline ac489291e1e4ef9a908078a1dd1817f6 https://www.encodeproject.org/files/ENCFF299RHL/@@download/ENCFF299RHL.bed.gz GRCh38 released mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF829KGK bigBed narrowPeak peaks ENCSR710WLO ChIP-seq EFO:0002067 K562 cell line Homo sapiens MGA-human ENCAB591RYH DNA False 2016-12-19 ENCODE 1, 2 ENCFF935HPA 13123417 ENCODE Processing Pipeline 99d4cfd73cdb0325114c28753057ccf4 https://www.encodeproject.org/files/ENCFF829KGK/@@download/ENCFF829KGK.bigBed GRCh38 released mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF694KSM bed narrowPeak peaks ENCSR710WLO ChIP-seq EFO:0002067 K562 cell line Homo sapiens MGA-human ENCAB591RYH DNA False 2016-12-19 ENCODE 2 ENCFF066JMV 7206316 ENCODE Processing Pipeline f330c0cc918766b8bd4d09d10cf83663 https://www.encodeproject.org/files/ENCFF694KSM/@@download/ENCFF694KSM.bed.gz GRCh38 released mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF852CRJ bigBed narrowPeak peaks ENCSR710WLO ChIP-seq EFO:0002067 K562 cell line Homo sapiens MGA-human ENCAB591RYH DNA False 2016-12-19 ENCODE 2 ENCFF694KSM 13012642 ENCODE Processing Pipeline b99a817fb7c5d9321ed449408739a7dc https://www.encodeproject.org/files/ENCFF852CRJ/@@download/ENCFF852CRJ.bigBed GRCh38 released mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF935HPA bed narrowPeak peaks ENCSR710WLO ChIP-seq EFO:0002067 K562 cell line Homo sapiens MGA-human ENCAB591RYH DNA False 2016-12-19 ENCODE 1, 2 ENCFF066JMV, ENCFF330XAC 7310470 ENCODE Processing Pipeline 6cbcb5d2ee060f8423e597be99a5e148 https://www.encodeproject.org/files/ENCFF935HPA/@@download/ENCFF935HPA.bed.gz GRCh38 released mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF045PDJ bigBed narrowPeak peaks ENCSR710WLO ChIP-seq EFO:0002067 K562 cell line Homo sapiens MGA-human ENCAB591RYH DNA False 2016-12-19 ENCODE 1 ENCFF299RHL 13182496 ENCODE Processing Pipeline a47b59c35ff2a80e0d2c86d57cebe19a https://www.encodeproject.org/files/ENCFF045PDJ/@@download/ENCFF045PDJ.bigBed GRCh38 released mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF397DQH bigBed narrowPeak optimal idr thresholded peaks ENCSR710WLO ChIP-seq EFO:0002067 K562 cell line Homo sapiens MGA-human ENCAB591RYH DNA False 2016-12-19 ENCODE 1, 2 ENCFF525MPI 1417197 ENCODE Processing Pipeline bc8daa5701d18bfd8a60d23ab0f2a79c https://www.encodeproject.org/files/ENCFF397DQH/@@download/ENCFF397DQH.bigBed GRCh38 released mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF905MKI bigWig signal p-value ENCSR710WLO ChIP-seq EFO:0002067 K562 cell line Homo sapiens MGA-human ENCAB591RYH DNA False 2016-12-19 ENCODE 1 ENCFF160VXC, ENCFF834TUP, ENCFF981ZOJ 2044311460 ENCODE Processing Pipeline edd582244d9223bcbe0a8eccbf18b644 https://www.encodeproject.org/files/ENCFF905MKI/@@download/ENCFF905MKI.bigWig hg19 released mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF987ZDX bigWig signal p-value ENCSR710WLO ChIP-seq EFO:0002067 K562 cell line Homo sapiens MGA-human ENCAB591RYH DNA False 2016-12-19 ENCODE 2 ENCFF207ILO, ENCFF834TUP 1113417336 ENCODE Processing Pipeline 40c1604fb4d93b67cea21ab6b4e3e4b4 https://www.encodeproject.org/files/ENCFF987ZDX/@@download/ENCFF987ZDX.bigWig hg19 released mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF683RIR bigWig signal p-value ENCSR710WLO ChIP-seq EFO:0002067 K562 cell line Homo sapiens MGA-human ENCAB591RYH DNA False 2016-12-19 ENCODE 1, 2 ENCFF160VXC, ENCFF207ILO, ENCFF834TUP, ENCFF981ZOJ 2361045181 ENCODE Processing Pipeline 8e1f03bcbda6c5ccc1e16407b46ead12 https://www.encodeproject.org/files/ENCFF683RIR/@@download/ENCFF683RIR.bigWig hg19 released mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF932XMO bigWig fold change over control ENCSR710WLO ChIP-seq EFO:0002067 K562 cell line Homo sapiens MGA-human ENCAB591RYH DNA False 2016-12-19 ENCODE 1, 2 ENCFF160VXC, ENCFF207ILO, ENCFF834TUP, ENCFF981ZOJ 2851432185 ENCODE Processing Pipeline c2f54135df1c64001b7e2b8a85e3df0a https://www.encodeproject.org/files/ENCFF932XMO/@@download/ENCFF932XMO.bigWig hg19 released mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF189YFO bed narrowPeak peaks ENCSR710WLO ChIP-seq EFO:0002067 K562 cell line Homo sapiens MGA-human ENCAB591RYH DNA False 2016-12-19 ENCODE 2 ENCFF207ILO, ENCFF834TUP 7142686 ENCODE Processing Pipeline 5fba234db01600332db1a33dc36a687d https://www.encodeproject.org/files/ENCFF189YFO/@@download/ENCFF189YFO.bed.gz hg19 released mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF198PUN bigBed narrowPeak peaks ENCSR710WLO ChIP-seq EFO:0002067 K562 cell line Homo sapiens MGA-human ENCAB591RYH DNA False 2016-12-19 ENCODE 1 ENCFF230QTS 13165981 ENCODE Processing Pipeline 139899282ec346ae42ede40e578c5f1e https://www.encodeproject.org/files/ENCFF198PUN/@@download/ENCFF198PUN.bigBed hg19 released mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF388VRP bigWig fold change over control ENCSR710WLO ChIP-seq EFO:0002067 K562 cell line Homo sapiens MGA-human ENCAB591RYH DNA False 2016-12-19 ENCODE 1 ENCFF160VXC, ENCFF834TUP, ENCFF981ZOJ 2472094513 ENCODE Processing Pipeline 07d04081230b82ecd0b823bd706dbd90 https://www.encodeproject.org/files/ENCFF388VRP/@@download/ENCFF388VRP.bigWig hg19 released mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF390CDI bigBed narrowPeak peaks ENCSR710WLO ChIP-seq EFO:0002067 K562 cell line Homo sapiens MGA-human ENCAB591RYH DNA False 2016-12-19 ENCODE 2 ENCFF189YFO 12939662 ENCODE Processing Pipeline 276336176bd3ff2d7d1109b68f9c047d https://www.encodeproject.org/files/ENCFF390CDI/@@download/ENCFF390CDI.bigBed hg19 released mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF476TYF bigWig fold change over control ENCSR710WLO ChIP-seq EFO:0002067 K562 cell line Homo sapiens MGA-human ENCAB591RYH DNA False 2016-12-19 ENCODE 2 ENCFF207ILO, ENCFF834TUP 1409752517 ENCODE Processing Pipeline 53bcae607cf7345ee420d8067b11a232 https://www.encodeproject.org/files/ENCFF476TYF/@@download/ENCFF476TYF.bigWig hg19 released mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF230QTS bed narrowPeak peaks ENCSR710WLO ChIP-seq EFO:0002067 K562 cell line Homo sapiens MGA-human ENCAB591RYH DNA False 2016-12-19 ENCODE 1 ENCFF160VXC, ENCFF834TUP, ENCFF981ZOJ 7251235 ENCODE Processing Pipeline ac03467c13d09b0c060ac98caf91fb99 https://www.encodeproject.org/files/ENCFF230QTS/@@download/ENCFF230QTS.bed.gz hg19 released mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF207RUE bed narrowPeak peaks ENCSR710WLO ChIP-seq EFO:0002067 K562 cell line Homo sapiens MGA-human ENCAB591RYH DNA False 2016-12-19 ENCODE 1, 2 ENCFF160VXC, ENCFF207ILO, ENCFF834TUP, ENCFF981ZOJ 7309769 ENCODE Processing Pipeline 98bfaf46f1594d56e6b8d44ada364991 https://www.encodeproject.org/files/ENCFF207RUE/@@download/ENCFF207RUE.bed.gz hg19 released mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF670ZCR bed narrowPeak optimal idr thresholded peaks ENCSR710WLO ChIP-seq EFO:0002067 K562 cell line Homo sapiens MGA-human ENCAB591RYH DNA False 2016-12-19 ENCODE 1, 2 ENCFF001TDO, ENCFF189YFO, ENCFF207RUE, ENCFF230QTS 626753 ENCODE Processing Pipeline 3572fd53982de4f442b944272468c615 https://www.encodeproject.org/files/ENCFF670ZCR/@@download/ENCFF670ZCR.bed.gz hg19 released mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF287WIC bigBed narrowPeak peaks ENCSR710WLO ChIP-seq EFO:0002067 K562 cell line Homo sapiens MGA-human ENCAB591RYH DNA False 2016-12-19 ENCODE 1, 2 ENCFF207RUE 13120133 ENCODE Processing Pipeline 584a04562b2863d9854420ce5e878ada https://www.encodeproject.org/files/ENCFF287WIC/@@download/ENCFF287WIC.bigBed hg19 released mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF582HCK bed narrowPeak conservative idr thresholded peaks ENCSR710WLO ChIP-seq EFO:0002067 K562 cell line Homo sapiens MGA-human ENCAB591RYH DNA False 2016-12-19 ENCODE 1, 2 ENCFF001TDO, ENCFF189YFO, ENCFF207RUE, ENCFF230QTS 612927 ENCODE Processing Pipeline e7f77bd3f6e2275f94b8e6e7d1c54a62 https://www.encodeproject.org/files/ENCFF582HCK/@@download/ENCFF582HCK.bed.gz hg19 released mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF186UJB bigBed narrowPeak conservative idr thresholded peaks ENCSR710WLO ChIP-seq EFO:0002067 K562 cell line Homo sapiens MGA-human ENCAB591RYH DNA False 2016-12-19 ENCODE 1, 2 ENCFF582HCK 1390402 ENCODE Processing Pipeline 272422993686f63832939459cf9dea09 https://www.encodeproject.org/files/ENCFF186UJB/@@download/ENCFF186UJB.bigBed hg19 released mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF838CNQ bigBed narrowPeak optimal idr thresholded peaks ENCSR710WLO ChIP-seq EFO:0002067 K562 cell line Homo sapiens MGA-human ENCAB591RYH DNA False 2016-12-19 ENCODE 1, 2 ENCFF670ZCR 1429382 ENCODE Processing Pipeline a950a50937010ecdff81da00928ea3b9 https://www.encodeproject.org/files/ENCFF838CNQ/@@download/ENCFF838CNQ.bigBed hg19 released mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF000YHL bigBed narrowPeak peaks ENCSR000EFO ChIP-seq EFO:0002067 K562 cell line Homo sapiens CUX1-human ENCAB000AFA DNA see document see document False 2012-08-20 ENCODE ENCFF001VMG 1882642 Michael Snyder, Stanford a13d0b66597665d654ce20ffe479a966 https://www.encodeproject.org/files/ENCFF000YHL/@@download/ENCFF000YHL.bigBed hg19 archived inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF000YHM fastq reads ENCSR000EFO ChIP-seq EFO:0002067 K562 cell line Homo sapiens CUX1-human ENCAB000AFA DNA see document see document False 2012-08-20 ENCODE 1 1 36 single-ended 1527172919 Michael Snyder, Stanford 210add1205f5598eefbd36efbb58877d https://www.encodeproject.org/files/ENCFF000YHM/@@download/ENCFF000YHM.fastq.gz Illumina Genome Analyzer /files/ENCFF000YRB/ released inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF000YHO fastq reads ENCSR000EFO ChIP-seq EFO:0002067 K562 cell line Homo sapiens CUX1-human ENCAB000AFA DNA see document see document False 2012-08-20 ENCODE 2 1 36 single-ended 1296838499 Michael Snyder, Stanford d67a136a7dda2547eed504f68cfc80a1 https://www.encodeproject.org/files/ENCFF000YHO/@@download/ENCFF000YHO.fastq.gz Illumina Genome Analyzer /files/ENCFF000YRB/ released inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF000YHQ bigWig signal ENCSR000EFO ChIP-seq EFO:0002067 K562 cell line Homo sapiens CUX1-human ENCAB000AFA DNA see document see document False 2012-08-20 ENCODE 483642273 Michael Snyder, Stanford d30c1b865cf71635045fb6185207924a https://www.encodeproject.org/files/ENCFF000YHQ/@@download/ENCFF000YHQ.bigWig hg19 archived inconsistent target of control experiment, low read length biological replicates with identical biosample, missing derived_from ENCFF000YHR bam alignments ENCSR000EFO ChIP-seq EFO:0002067 K562 cell line Homo sapiens CUX1-human ENCAB000AFA DNA see document see document False 2012-08-20 ENCODE 2 1 665339499 Michael Snyder, Stanford 2eb88087cb9294a18236b2e0e395b7d9 https://www.encodeproject.org/files/ENCFF000YHR/@@download/ENCFF000YHR.bam hg19 archived inconsistent target of control experiment, low read length biological replicates with identical biosample, missing derived_from ENCFF000YHS bam alignments ENCSR000EFO ChIP-seq EFO:0002067 K562 cell line Homo sapiens CUX1-human ENCAB000AFA DNA see document see document False 2012-08-20 ENCODE 1 1 676034772 Michael Snyder, Stanford 4fb387d99b4bf0e0c39bdc3100c4dfa4 https://www.encodeproject.org/files/ENCFF000YHS/@@download/ENCFF000YHS.bam hg19 archived inconsistent target of control experiment, low read length biological replicates with identical biosample, missing derived_from ENCFF001VMG bed narrowPeak peaks ENCSR000EFO ChIP-seq EFO:0002067 K562 cell line Homo sapiens CUX1-human ENCAB000AFA DNA see document see document False 2012-08-20 ENCODE 896817 Michael Snyder, Stanford d20fccbb76459a4b2a02a3814b92bdd7 https://www.encodeproject.org/files/ENCFF001VMG/@@download/ENCFF001VMG.bed.gz hg19 archived inconsistent target of control experiment, low read length biological replicates with identical biosample, missing derived_from ENCFF578UPA bam unfiltered alignments ENCSR000EFO ChIP-seq EFO:0002067 K562 cell line Homo sapiens CUX1-human ENCAB000AFA DNA see document see document False 2012-08-20 ENCODE 1 36 ENCFF000YHM, ENCFF643CGH 1736772173 ENCODE Processing Pipeline 4285ecbd2fcd110c72fb2b4616385703 https://www.encodeproject.org/files/ENCFF578UPA/@@download/ENCFF578UPA.bam GRCh38 released inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF482CMU bam alignments ENCSR000EFO ChIP-seq EFO:0002067 K562 cell line Homo sapiens CUX1-human ENCAB000AFA DNA see document see document False 2012-08-20 ENCODE 1 36 ENCFF000YHM, ENCFF643CGH 1209809373 ENCODE Processing Pipeline 9bfbf1d42fbf68593c7a8c7b24a25fe3 https://www.encodeproject.org/files/ENCFF482CMU/@@download/ENCFF482CMU.bam GRCh38 released inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF151VAM bam unfiltered alignments ENCSR000EFO ChIP-seq EFO:0002067 K562 cell line Homo sapiens CUX1-human ENCAB000AFA DNA see document see document False 2012-08-20 ENCODE 2 36 ENCFF000YHO, ENCFF643CGH 1510389014 ENCODE Processing Pipeline 79ea06119bc3edda667f2355cbbf49a5 https://www.encodeproject.org/files/ENCFF151VAM/@@download/ENCFF151VAM.bam GRCh38 released inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF662BBY bam alignments ENCSR000EFO ChIP-seq EFO:0002067 K562 cell line Homo sapiens CUX1-human ENCAB000AFA DNA see document see document False 2012-08-20 ENCODE 2 36 ENCFF000YHO, ENCFF643CGH 1026109854 ENCODE Processing Pipeline 265a284d83a61d8edb754e8deba6c35d https://www.encodeproject.org/files/ENCFF662BBY/@@download/ENCFF662BBY.bam GRCh38 released inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF072DTZ bam unfiltered alignments ENCSR000EFO ChIP-seq EFO:0002067 K562 cell line Homo sapiens CUX1-human ENCAB000AFA DNA see document see document False 2012-08-20 ENCODE 1 36 ENCFF000YHM, ENCFF807MUK 1728561085 ENCODE Processing Pipeline 41a250cb86a235ed221cc7be216fc80f https://www.encodeproject.org/files/ENCFF072DTZ/@@download/ENCFF072DTZ.bam hg19 released inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF613OTB bam unfiltered alignments ENCSR000EFO ChIP-seq EFO:0002067 K562 cell line Homo sapiens CUX1-human ENCAB000AFA DNA see document see document False 2012-08-20 ENCODE 2 36 ENCFF000YHO, ENCFF807MUK 1503215055 ENCODE Processing Pipeline 5b3a1bd221b18522bc8b001404881678 https://www.encodeproject.org/files/ENCFF613OTB/@@download/ENCFF613OTB.bam hg19 released inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF377MEH bam alignments ENCSR000EFO ChIP-seq EFO:0002067 K562 cell line Homo sapiens CUX1-human ENCAB000AFA DNA see document see document False 2012-08-20 ENCODE 2 36 ENCFF000YHO, ENCFF807MUK 1026732870 ENCODE Processing Pipeline 1cfd31e22dde2f2d2c47aac97d302b5a https://www.encodeproject.org/files/ENCFF377MEH/@@download/ENCFF377MEH.bam hg19 released inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF353HYR bam alignments ENCSR000EFO ChIP-seq EFO:0002067 K562 cell line Homo sapiens CUX1-human ENCAB000AFA DNA see document see document False 2012-08-20 ENCODE 1 36 ENCFF000YHM, ENCFF807MUK 1210457188 ENCODE Processing Pipeline e7e1fd0b4375683b36b5f9d04956a7e4 https://www.encodeproject.org/files/ENCFF353HYR/@@download/ENCFF353HYR.bam hg19 released inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF320LTI bigWig fold change over control ENCSR000EFO ChIP-seq EFO:0002067 K562 cell line Homo sapiens CUX1-human ENCAB000AFA DNA see document see document False 2012-08-20 ENCODE 2 ENCFF662BBY 483090063 ENCODE Processing Pipeline 9afc317e22b734953f2b2f31809634a8 https://www.encodeproject.org/files/ENCFF320LTI/@@download/ENCFF320LTI.bigWig GRCh38 released inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF688YAV bed narrowPeak peaks ENCSR000EFO ChIP-seq EFO:0002067 K562 cell line Homo sapiens CUX1-human ENCAB000AFA DNA see document see document False 2012-08-20 ENCODE 1, 2 ENCFF482CMU, ENCFF662BBY 5971527 ENCODE Processing Pipeline 4e8841d5ebff8c4658b72c66bc13cbd2 https://www.encodeproject.org/files/ENCFF688YAV/@@download/ENCFF688YAV.bed.gz GRCh38 released inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF334RIS bigBed narrowPeak peaks ENCSR000EFO ChIP-seq EFO:0002067 K562 cell line Homo sapiens CUX1-human ENCAB000AFA DNA see document see document False 2012-08-20 ENCODE 1, 2 ENCFF688YAV 13216346 ENCODE Processing Pipeline 48f5d78774e775be8e8f4308ce4cca73 https://www.encodeproject.org/files/ENCFF334RIS/@@download/ENCFF334RIS.bigBed GRCh38 released inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF146BYQ bigBed narrowPeak peaks ENCSR000EFO ChIP-seq EFO:0002067 K562 cell line Homo sapiens CUX1-human ENCAB000AFA DNA see document see document False 2012-08-20 ENCODE 1 ENCFF137HNJ 11016812 ENCODE Processing Pipeline 5eec22a721b21900c2ac47c7da3efed6 https://www.encodeproject.org/files/ENCFF146BYQ/@@download/ENCFF146BYQ.bigBed GRCh38 released inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF126OJN bigBed narrowPeak peaks ENCSR000EFO ChIP-seq EFO:0002067 K562 cell line Homo sapiens CUX1-human ENCAB000AFA DNA see document see document False 2012-08-20 ENCODE 2 ENCFF641LBE 11105200 ENCODE Processing Pipeline 535f62efa9c2a47105216f7c84d7167c https://www.encodeproject.org/files/ENCFF126OJN/@@download/ENCFF126OJN.bigBed GRCh38 released inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF099SET bigBed narrowPeak conservative idr thresholded peaks ENCSR000EFO ChIP-seq EFO:0002067 K562 cell line Homo sapiens CUX1-human ENCAB000AFA DNA see document see document False 2012-08-20 ENCODE 1, 2 ENCFF317FDT 260126 ENCODE Processing Pipeline 9d4843c010d2e7d13b12d353430e9ca4 https://www.encodeproject.org/files/ENCFF099SET/@@download/ENCFF099SET.bigBed GRCh38 released inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF556HMX bed narrowPeak optimal idr thresholded peaks ENCSR000EFO ChIP-seq EFO:0002067 K562 cell line Homo sapiens CUX1-human ENCAB000AFA DNA see document see document False 2012-08-20 ENCODE 1, 2 ENCFF137HNJ, ENCFF419RSJ, ENCFF641LBE, ENCFF688YAV 123219 ENCODE Processing Pipeline 153c91356349810df0579535ad132ba6 https://www.encodeproject.org/files/ENCFF556HMX/@@download/ENCFF556HMX.bed.gz GRCh38 released inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF142YVY bigBed narrowPeak optimal idr thresholded peaks ENCSR000EFO ChIP-seq EFO:0002067 K562 cell line Homo sapiens CUX1-human ENCAB000AFA DNA see document see document False 2012-08-20 ENCODE 1, 2 ENCFF556HMX 276378 ENCODE Processing Pipeline 849306954b337f3bc97ae46080224d74 https://www.encodeproject.org/files/ENCFF142YVY/@@download/ENCFF142YVY.bigBed GRCh38 released inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF948MNS bigWig fold change over control ENCSR000EFO ChIP-seq EFO:0002067 K562 cell line Homo sapiens CUX1-human ENCAB000AFA DNA see document see document False 2012-08-20 ENCODE 1 ENCFF482CMU 520545175 ENCODE Processing Pipeline 2151368cabfc12e4963168664c779c34 https://www.encodeproject.org/files/ENCFF948MNS/@@download/ENCFF948MNS.bigWig GRCh38 released inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF952VAW bigWig signal p-value ENCSR000EFO ChIP-seq EFO:0002067 K562 cell line Homo sapiens CUX1-human ENCAB000AFA DNA see document see document False 2012-08-20 ENCODE 1 ENCFF482CMU 550967712 ENCODE Processing Pipeline 672a7ae3932941f8d20b30151406f267 https://www.encodeproject.org/files/ENCFF952VAW/@@download/ENCFF952VAW.bigWig GRCh38 released inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF200ZIM bigWig fold change over control ENCSR000EFO ChIP-seq EFO:0002067 K562 cell line Homo sapiens CUX1-human ENCAB000AFA DNA see document see document False 2012-08-20 ENCODE 1, 2 ENCFF482CMU, ENCFF662BBY 835287723 ENCODE Processing Pipeline ed2e8237be08255c71e29f00d8febd9a https://www.encodeproject.org/files/ENCFF200ZIM/@@download/ENCFF200ZIM.bigWig GRCh38 released inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF165GSP bigWig signal p-value ENCSR000EFO ChIP-seq EFO:0002067 K562 cell line Homo sapiens CUX1-human ENCAB000AFA DNA see document see document False 2012-08-20 ENCODE 2 ENCFF662BBY 511046181 ENCODE Processing Pipeline 96dc014c5e75a9df924ff8505dcc2be5 https://www.encodeproject.org/files/ENCFF165GSP/@@download/ENCFF165GSP.bigWig GRCh38 released inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF721WXT bigWig signal p-value ENCSR000EFO ChIP-seq EFO:0002067 K562 cell line Homo sapiens CUX1-human ENCAB000AFA DNA see document see document False 2012-08-20 ENCODE 1, 2 ENCFF482CMU, ENCFF662BBY 533071999 ENCODE Processing Pipeline 4b9744871f33ff698da5a37b6f336d6b https://www.encodeproject.org/files/ENCFF721WXT/@@download/ENCFF721WXT.bigWig GRCh38 released inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF137HNJ bed narrowPeak peaks ENCSR000EFO ChIP-seq EFO:0002067 K562 cell line Homo sapiens CUX1-human ENCAB000AFA DNA see document see document False 2012-08-20 ENCODE 1 ENCFF482CMU 4905460 ENCODE Processing Pipeline b70e9d46397434a3f3d1a5ddbb2d533b https://www.encodeproject.org/files/ENCFF137HNJ/@@download/ENCFF137HNJ.bed.gz GRCh38 released inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF641LBE bed narrowPeak peaks ENCSR000EFO ChIP-seq EFO:0002067 K562 cell line Homo sapiens CUX1-human ENCAB000AFA DNA see document see document False 2012-08-20 ENCODE 2 ENCFF662BBY 5288083 ENCODE Processing Pipeline 7ac5c8405b5927e5f9b076b6ac89aa1a https://www.encodeproject.org/files/ENCFF641LBE/@@download/ENCFF641LBE.bed.gz GRCh38 released inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF317FDT bed narrowPeak conservative idr thresholded peaks ENCSR000EFO ChIP-seq EFO:0002067 K562 cell line Homo sapiens CUX1-human ENCAB000AFA DNA see document see document False 2012-08-20 ENCODE 1, 2 ENCFF137HNJ, ENCFF419RSJ, ENCFF641LBE, ENCFF688YAV 112575 ENCODE Processing Pipeline 22ae477e9685f1d8122ffb421f7be648 https://www.encodeproject.org/files/ENCFF317FDT/@@download/ENCFF317FDT.bed.gz GRCh38 released inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF149VXS bigWig fold change over control ENCSR000EFO ChIP-seq EFO:0002067 K562 cell line Homo sapiens CUX1-human ENCAB000AFA DNA see document see document False 2012-08-20 ENCODE 2 ENCFF377MEH, ENCFF710NTS 507119863 ENCODE Processing Pipeline 5430e5ab3984a1f10939543178912888 https://www.encodeproject.org/files/ENCFF149VXS/@@download/ENCFF149VXS.bigWig hg19 released inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF316VIX bigWig signal p-value ENCSR000EFO ChIP-seq EFO:0002067 K562 cell line Homo sapiens CUX1-human ENCAB000AFA DNA see document see document False 2012-08-20 ENCODE 1, 2 ENCFF353HYR, ENCFF377MEH, ENCFF710NTS 562782508 ENCODE Processing Pipeline bcaad97518593dc95cd90eb402870ea1 https://www.encodeproject.org/files/ENCFF316VIX/@@download/ENCFF316VIX.bigWig hg19 released inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF725FYI bed narrowPeak peaks ENCSR000EFO ChIP-seq EFO:0002067 K562 cell line Homo sapiens CUX1-human ENCAB000AFA DNA see document see document False 2012-08-20 ENCODE 1, 2 ENCFF353HYR, ENCFF377MEH, ENCFF710NTS 5946943 ENCODE Processing Pipeline 61e0c97c0c8aad5b5b0d5661bd427966 https://www.encodeproject.org/files/ENCFF725FYI/@@download/ENCFF725FYI.bed.gz hg19 released inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF140YUP bigBed narrowPeak peaks ENCSR000EFO ChIP-seq EFO:0002067 K562 cell line Homo sapiens CUX1-human ENCAB000AFA DNA see document see document False 2012-08-20 ENCODE 2 ENCFF599SPU 11108020 ENCODE Processing Pipeline bde08a9ca2099951bf9c06f7c5e1bbaf https://www.encodeproject.org/files/ENCFF140YUP/@@download/ENCFF140YUP.bigBed hg19 released inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF387RZY bigBed narrowPeak peaks ENCSR000EFO ChIP-seq EFO:0002067 K562 cell line Homo sapiens CUX1-human ENCAB000AFA DNA see document see document False 2012-08-20 ENCODE 1, 2 ENCFF725FYI 13211848 ENCODE Processing Pipeline 5d27f1690e24ce20d9ac934d95ec219b https://www.encodeproject.org/files/ENCFF387RZY/@@download/ENCFF387RZY.bigBed hg19 released inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF517YCC bed narrowPeak optimal idr thresholded peaks ENCSR000EFO ChIP-seq EFO:0002067 K562 cell line Homo sapiens CUX1-human ENCAB000AFA DNA see document see document False 2012-08-20 ENCODE 1, 2 ENCFF001TDO, ENCFF599SPU, ENCFF675GZY, ENCFF725FYI 119496 ENCODE Processing Pipeline 2b856671dd29071ba3eec1e8a4e8f69d https://www.encodeproject.org/files/ENCFF517YCC/@@download/ENCFF517YCC.bed.gz hg19 released inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF908NGW bigWig signal p-value ENCSR000EFO ChIP-seq EFO:0002067 K562 cell line Homo sapiens CUX1-human ENCAB000AFA DNA see document see document False 2012-08-20 ENCODE 1 ENCFF353HYR, ENCFF710NTS 533120106 ENCODE Processing Pipeline 46764257d40011e24bf99443f60ac111 https://www.encodeproject.org/files/ENCFF908NGW/@@download/ENCFF908NGW.bigWig hg19 released inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF785UJJ bigWig signal p-value ENCSR000EFO ChIP-seq EFO:0002067 K562 cell line Homo sapiens CUX1-human ENCAB000AFA DNA see document see document False 2012-08-20 ENCODE 2 ENCFF377MEH, ENCFF710NTS 527993754 ENCODE Processing Pipeline 4a8cfc302fc8a1f891d8ebced7750898 https://www.encodeproject.org/files/ENCFF785UJJ/@@download/ENCFF785UJJ.bigWig hg19 released inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF950NCQ bigWig fold change over control ENCSR000EFO ChIP-seq EFO:0002067 K562 cell line Homo sapiens CUX1-human ENCAB000AFA DNA see document see document False 2012-08-20 ENCODE 1, 2 ENCFF353HYR, ENCFF377MEH, ENCFF710NTS 839346846 ENCODE Processing Pipeline f1a16b9459155fc3418683278794b190 https://www.encodeproject.org/files/ENCFF950NCQ/@@download/ENCFF950NCQ.bigWig hg19 released inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF653HIF bigBed narrowPeak conservative idr thresholded peaks ENCSR000EFO ChIP-seq EFO:0002067 K562 cell line Homo sapiens CUX1-human ENCAB000AFA DNA see document see document False 2012-08-20 ENCODE 1, 2 ENCFF010SPN 255161 ENCODE Processing Pipeline 264924016f7bc25b5735a348e034bbaa https://www.encodeproject.org/files/ENCFF653HIF/@@download/ENCFF653HIF.bigBed hg19 released inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF977UEV bigBed narrowPeak optimal idr thresholded peaks ENCSR000EFO ChIP-seq EFO:0002067 K562 cell line Homo sapiens CUX1-human ENCAB000AFA DNA see document see document False 2012-08-20 ENCODE 1, 2 ENCFF517YCC 270656 ENCODE Processing Pipeline 428fb836562b50807fe440d5f6cb9e1b https://www.encodeproject.org/files/ENCFF977UEV/@@download/ENCFF977UEV.bigBed hg19 released inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF764CFU bigWig fold change over control ENCSR000EFO ChIP-seq EFO:0002067 K562 cell line Homo sapiens CUX1-human ENCAB000AFA DNA see document see document False 2012-08-20 ENCODE 1 ENCFF353HYR, ENCFF710NTS 514054661 ENCODE Processing Pipeline 5c166ee2e8ede21fd120a08b0767d231 https://www.encodeproject.org/files/ENCFF764CFU/@@download/ENCFF764CFU.bigWig hg19 released inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF675GZY bed narrowPeak peaks ENCSR000EFO ChIP-seq EFO:0002067 K562 cell line Homo sapiens CUX1-human ENCAB000AFA DNA see document see document False 2012-08-20 ENCODE 1 ENCFF353HYR, ENCFF710NTS 4975729 ENCODE Processing Pipeline fdd0e953af4503ea9b37a6a43e52ce4c https://www.encodeproject.org/files/ENCFF675GZY/@@download/ENCFF675GZY.bed.gz hg19 released inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF010SPN bed narrowPeak conservative idr thresholded peaks ENCSR000EFO ChIP-seq EFO:0002067 K562 cell line Homo sapiens CUX1-human ENCAB000AFA DNA see document see document False 2012-08-20 ENCODE 1, 2 ENCFF001TDO, ENCFF599SPU, ENCFF675GZY, ENCFF725FYI 109744 ENCODE Processing Pipeline 2c64aff8b684ec8fca65a8cb14800f67 https://www.encodeproject.org/files/ENCFF010SPN/@@download/ENCFF010SPN.bed.gz hg19 released inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF599SPU bed narrowPeak peaks ENCSR000EFO ChIP-seq EFO:0002067 K562 cell line Homo sapiens CUX1-human ENCAB000AFA DNA see document see document False 2012-08-20 ENCODE 2 ENCFF377MEH, ENCFF710NTS 5291266 ENCODE Processing Pipeline cb06ef30f1d113827a464623c4fefc29 https://www.encodeproject.org/files/ENCFF599SPU/@@download/ENCFF599SPU.bed.gz hg19 released inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF588MTD bigBed narrowPeak peaks ENCSR000EFO ChIP-seq EFO:0002067 K562 cell line Homo sapiens CUX1-human ENCAB000AFA DNA see document see document False 2012-08-20 ENCODE 1 ENCFF675GZY 11036303 ENCODE Processing Pipeline 96ff407d1ea36356c788eb5d2364da68 https://www.encodeproject.org/files/ENCFF588MTD/@@download/ENCFF588MTD.bigBed hg19 released inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF978OQN bam unfiltered alignments ENCSR715CCR ChIP-seq EFO:0002067 K562 cell line Homo sapiens DPF2-human ENCAB076EMA DNA False 2016-04-22 ENCODE 1 100 ENCFF031JCO, ENCFF579BJG, ENCFF807MUK 4891017892 ENCODE Processing Pipeline c7c3c84e79636f8592aa18738d9aa5a6 https://www.encodeproject.org/files/ENCFF978OQN/@@download/ENCFF978OQN.bam hg19 released missing control alignments ENCFF961TUS bam unfiltered alignments ENCSR715CCR ChIP-seq EFO:0002067 K562 cell line Homo sapiens DPF2-human ENCAB076EMA DNA False 2016-04-22 ENCODE 2 100 ENCFF290HFY, ENCFF389HJO, ENCFF807MUK 4988210709 ENCODE Processing Pipeline 684b9a379348bb1f6a00c8567a05c04d https://www.encodeproject.org/files/ENCFF961TUS/@@download/ENCFF961TUS.bam hg19 released missing control alignments ENCFF579BJG fastq reads ENCSR715CCR ChIP-seq EFO:0002067 K562 cell line Homo sapiens DPF2-human ENCAB076EMA DNA False 2016-04-22 ENCODE 1 1 100 paired-ended 1 ENCFF031JCO 2238776183 Michael Snyder, Stanford fb0fedad886058e981cda9f760e23ca7 SRA:SRR5111996 https://www.encodeproject.org/files/ENCFF579BJG/@@download/ENCFF579BJG.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFF/ released missing control alignments ENCFF031JCO fastq reads ENCSR715CCR ChIP-seq EFO:0002067 K562 cell line Homo sapiens DPF2-human ENCAB076EMA DNA False 2016-04-22 ENCODE 1 1 100 paired-ended 2 ENCFF579BJG 2266799132 Michael Snyder, Stanford e2c01dfc59e5b04ce99b26e8f4a6e1ad SRA:SRR5111996 https://www.encodeproject.org/files/ENCFF031JCO/@@download/ENCFF031JCO.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFH/ released missing control alignments ENCFF290HFY fastq reads ENCSR715CCR ChIP-seq EFO:0002067 K562 cell line Homo sapiens DPF2-human ENCAB076EMA DNA False 2016-04-22 ENCODE 2 1 100 paired-ended 2 ENCFF389HJO 2276695908 Michael Snyder, Stanford 180984e5627c7b935b22c50da498772c SRA:SRR5111997 https://www.encodeproject.org/files/ENCFF290HFY/@@download/ENCFF290HFY.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFA/ released missing control alignments ENCFF389HJO fastq reads ENCSR715CCR ChIP-seq EFO:0002067 K562 cell line Homo sapiens DPF2-human ENCAB076EMA DNA False 2016-04-22 ENCODE 2 1 100 paired-ended 1 ENCFF290HFY 2355533628 Michael Snyder, Stanford 1a01960a94b28fb3eb5eb44f155d4057 SRA:SRR5111997 https://www.encodeproject.org/files/ENCFF389HJO/@@download/ENCFF389HJO.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFD/ released missing control alignments ENCFF419BCJ bam alignments ENCSR715CCR ChIP-seq EFO:0002067 K562 cell line Homo sapiens DPF2-human ENCAB076EMA DNA False 2016-04-22 ENCODE 1 100 ENCFF031JCO, ENCFF579BJG, ENCFF807MUK 4056706019 ENCODE Processing Pipeline 8b26d8d5bfb17ee8c74086d8a48e15b1 https://www.encodeproject.org/files/ENCFF419BCJ/@@download/ENCFF419BCJ.bam hg19 released missing control alignments ENCFF275MTH bam alignments ENCSR715CCR ChIP-seq EFO:0002067 K562 cell line Homo sapiens DPF2-human ENCAB076EMA DNA False 2016-04-22 ENCODE 2 100 ENCFF290HFY, ENCFF389HJO, ENCFF807MUK 4123622959 ENCODE Processing Pipeline a39fcb88b4f6f23d2d715bd92c773588 https://www.encodeproject.org/files/ENCFF275MTH/@@download/ENCFF275MTH.bam hg19 released missing control alignments ENCFF008LZB bigWig signal p-value ENCSR715CCR ChIP-seq EFO:0002067 K562 cell line Homo sapiens DPF2-human ENCAB076EMA DNA False 2016-04-22 ENCODE 1 ENCFF419BCJ, ENCFF581ZJL 993925263 ENCODE Processing Pipeline 7e0ed9daf5c17f9d3c543e8fc2827cab https://www.encodeproject.org/files/ENCFF008LZB/@@download/ENCFF008LZB.bigWig hg19 released missing control alignments ENCFF501PHW bigWig signal p-value ENCSR715CCR ChIP-seq EFO:0002067 K562 cell line Homo sapiens DPF2-human ENCAB076EMA DNA False 2016-04-22 ENCODE 1, 2 ENCFF051LWI, ENCFF275MTH, ENCFF419BCJ, ENCFF581ZJL 1908227243 ENCODE Processing Pipeline 5e778cab0026fea5dee9427cf607c2f4 https://www.encodeproject.org/files/ENCFF501PHW/@@download/ENCFF501PHW.bigWig hg19 released missing control alignments ENCFF518XWO bigWig fold change over control ENCSR715CCR ChIP-seq EFO:0002067 K562 cell line Homo sapiens DPF2-human ENCAB076EMA DNA False 2016-04-22 ENCODE 1 ENCFF419BCJ, ENCFF581ZJL 1095944673 ENCODE Processing Pipeline 044f81c509f4a4a114dce87858ba2e01 https://www.encodeproject.org/files/ENCFF518XWO/@@download/ENCFF518XWO.bigWig hg19 released missing control alignments ENCFF950HQL bigWig fold change over control ENCSR715CCR ChIP-seq EFO:0002067 K562 cell line Homo sapiens DPF2-human ENCAB076EMA DNA False 2016-04-22 ENCODE 1, 2 ENCFF051LWI, ENCFF275MTH, ENCFF419BCJ, ENCFF581ZJL 2032228868 ENCODE Processing Pipeline a2c56d4a7bd697ffa4fc2c89c2300865 https://www.encodeproject.org/files/ENCFF950HQL/@@download/ENCFF950HQL.bigWig hg19 released missing control alignments ENCFF769IXF bam unfiltered alignments ENCSR715CCR ChIP-seq EFO:0002067 K562 cell line Homo sapiens DPF2-human ENCAB076EMA DNA False 2016-04-22 ENCODE 2 100 ENCFF290HFY, ENCFF389HJO, ENCFF643CGH 4991710530 ENCODE Processing Pipeline 88c5ed5ccd328334190c59e6d3e2b3a6 https://www.encodeproject.org/files/ENCFF769IXF/@@download/ENCFF769IXF.bam GRCh38 released missing control alignments ENCFF558VZG bam unfiltered alignments ENCSR715CCR ChIP-seq EFO:0002067 K562 cell line Homo sapiens DPF2-human ENCAB076EMA DNA False 2016-04-22 ENCODE 1 100 ENCFF031JCO, ENCFF579BJG, ENCFF643CGH 4894135386 ENCODE Processing Pipeline dc3f93cb8362723897f157de748b27a7 https://www.encodeproject.org/files/ENCFF558VZG/@@download/ENCFF558VZG.bam GRCh38 released missing control alignments ENCFF990RGE bam alignments ENCSR715CCR ChIP-seq EFO:0002067 K562 cell line Homo sapiens DPF2-human ENCAB076EMA DNA False 2016-04-22 ENCODE 1 100 ENCFF031JCO, ENCFF579BJG, ENCFF643CGH 4058830620 ENCODE Processing Pipeline 0784d80d2ec22873b8af398a4b6c95af https://www.encodeproject.org/files/ENCFF990RGE/@@download/ENCFF990RGE.bam GRCh38 released missing control alignments ENCFF205JWI bam alignments ENCSR715CCR ChIP-seq EFO:0002067 K562 cell line Homo sapiens DPF2-human ENCAB076EMA DNA False 2016-04-22 ENCODE 2 100 ENCFF290HFY, ENCFF389HJO, ENCFF643CGH 4126083015 ENCODE Processing Pipeline 3a37d4338adaeb55f40908d10aaf2e01 https://www.encodeproject.org/files/ENCFF205JWI/@@download/ENCFF205JWI.bam GRCh38 released missing control alignments ENCFF602WSY bigWig signal p-value ENCSR715CCR ChIP-seq EFO:0002067 K562 cell line Homo sapiens DPF2-human ENCAB076EMA DNA False 2016-04-22 ENCODE 1 ENCFF990RGE 1165695792 ENCODE Processing Pipeline d2bf75cd9d79fbcec24a068355ea92d0 https://www.encodeproject.org/files/ENCFF602WSY/@@download/ENCFF602WSY.bigWig GRCh38 released missing control alignments ENCFF348PHJ bigWig signal p-value ENCSR715CCR ChIP-seq EFO:0002067 K562 cell line Homo sapiens DPF2-human ENCAB076EMA DNA False 2016-04-22 ENCODE 2 ENCFF205JWI 996403906 ENCODE Processing Pipeline c5ab2991a2ea3abe1699eee8550af863 https://www.encodeproject.org/files/ENCFF348PHJ/@@download/ENCFF348PHJ.bigWig GRCh38 released missing control alignments ENCFF299QNZ bigWig signal p-value ENCSR715CCR ChIP-seq EFO:0002067 K562 cell line Homo sapiens DPF2-human ENCAB076EMA DNA False 2016-04-22 ENCODE 1, 2 ENCFF205JWI, ENCFF990RGE 1633925318 ENCODE Processing Pipeline e16e25944c11b269015faaec0a3e17be https://www.encodeproject.org/files/ENCFF299QNZ/@@download/ENCFF299QNZ.bigWig GRCh38 released missing control alignments ENCFF303SNH bigWig fold change over control ENCSR715CCR ChIP-seq EFO:0002067 K562 cell line Homo sapiens DPF2-human ENCAB076EMA DNA False 2016-04-22 ENCODE 1 ENCFF990RGE 1112033162 ENCODE Processing Pipeline 56fc4362aaee1103c5e3f5a7d70e6a4b https://www.encodeproject.org/files/ENCFF303SNH/@@download/ENCFF303SNH.bigWig GRCh38 released missing control alignments ENCFF604AYW bigWig fold change over control ENCSR715CCR ChIP-seq EFO:0002067 K562 cell line Homo sapiens DPF2-human ENCAB076EMA DNA False 2016-04-22 ENCODE 2 ENCFF205JWI 1082903932 ENCODE Processing Pipeline 148a05c19a93d8181cb4a5ae29cf2b06 https://www.encodeproject.org/files/ENCFF604AYW/@@download/ENCFF604AYW.bigWig GRCh38 released missing control alignments ENCFF772BIP bigWig fold change over control ENCSR715CCR ChIP-seq EFO:0002067 K562 cell line Homo sapiens DPF2-human ENCAB076EMA DNA False 2016-04-22 ENCODE 1, 2 ENCFF205JWI, ENCFF990RGE 2032716144 ENCODE Processing Pipeline 96cd635d1830806ba587ba6034cc4b99 https://www.encodeproject.org/files/ENCFF772BIP/@@download/ENCFF772BIP.bigWig GRCh38 released missing control alignments ENCFF270KFK bed narrowPeak peaks ENCSR715CCR ChIP-seq EFO:0002067 K562 cell line Homo sapiens DPF2-human ENCAB076EMA DNA False 2016-04-22 ENCODE 1 ENCFF990RGE 6953744 ENCODE Processing Pipeline b4ff747cda216dbd657bb70ed71c07ec https://www.encodeproject.org/files/ENCFF270KFK/@@download/ENCFF270KFK.bed.gz GRCh38 released missing control alignments ENCFF866GQW bed narrowPeak peaks ENCSR715CCR ChIP-seq EFO:0002067 K562 cell line Homo sapiens DPF2-human ENCAB076EMA DNA False 2016-04-22 ENCODE 2 ENCFF205JWI 7081882 ENCODE Processing Pipeline 837bf54ed6ea5dfa0037ea25db86d35f https://www.encodeproject.org/files/ENCFF866GQW/@@download/ENCFF866GQW.bed.gz GRCh38 released missing control alignments ENCFF604PYY bed narrowPeak peaks ENCSR715CCR ChIP-seq EFO:0002067 K562 cell line Homo sapiens DPF2-human ENCAB076EMA DNA False 2016-04-22 ENCODE 1, 2 ENCFF205JWI, ENCFF990RGE 7076825 ENCODE Processing Pipeline b0db0cc49e12aeef6a7bd83ff809d09e https://www.encodeproject.org/files/ENCFF604PYY/@@download/ENCFF604PYY.bed.gz GRCh38 released missing control alignments ENCFF063KQF bigBed narrowPeak peaks ENCSR715CCR ChIP-seq EFO:0002067 K562 cell line Homo sapiens DPF2-human ENCAB076EMA DNA False 2016-04-22 ENCODE 1 ENCFF270KFK 12512693 ENCODE Processing Pipeline 2c3c0d22d6924c46076c0fda0d6ecc6a https://www.encodeproject.org/files/ENCFF063KQF/@@download/ENCFF063KQF.bigBed GRCh38 released missing control alignments ENCFF010BQK bigBed narrowPeak peaks ENCSR715CCR ChIP-seq EFO:0002067 K562 cell line Homo sapiens DPF2-human ENCAB076EMA DNA False 2016-04-22 ENCODE 2 ENCFF866GQW 12569962 ENCODE Processing Pipeline 27a452da8c6b1b9630857f6b0827d1f7 https://www.encodeproject.org/files/ENCFF010BQK/@@download/ENCFF010BQK.bigBed GRCh38 released missing control alignments ENCFF857HLP bigBed narrowPeak peaks ENCSR715CCR ChIP-seq EFO:0002067 K562 cell line Homo sapiens DPF2-human ENCAB076EMA DNA False 2016-04-22 ENCODE 1, 2 ENCFF604PYY 12468114 ENCODE Processing Pipeline 68812fdb53ebdedf36cc78b189f9f1a1 https://www.encodeproject.org/files/ENCFF857HLP/@@download/ENCFF857HLP.bigBed GRCh38 released missing control alignments ENCFF315QEI bed narrowPeak conservative idr thresholded peaks ENCSR715CCR ChIP-seq EFO:0002067 K562 cell line Homo sapiens DPF2-human ENCAB076EMA DNA False 2016-04-22 ENCODE 1, 2 ENCFF270KFK, ENCFF419RSJ, ENCFF604PYY, ENCFF866GQW 719807 ENCODE Processing Pipeline 5c6e471d10b6e130280ca21b58d0489b https://www.encodeproject.org/files/ENCFF315QEI/@@download/ENCFF315QEI.bed.gz GRCh38 released missing control alignments ENCFF696SQO bigBed narrowPeak conservative idr thresholded peaks ENCSR715CCR ChIP-seq EFO:0002067 K562 cell line Homo sapiens DPF2-human ENCAB076EMA DNA False 2016-04-22 ENCODE 1, 2 ENCFF315QEI 1275011 ENCODE Processing Pipeline 57481bf68af26927d7bc64a7ffc10ee3 https://www.encodeproject.org/files/ENCFF696SQO/@@download/ENCFF696SQO.bigBed GRCh38 released missing control alignments ENCFF217ZTP bed narrowPeak optimal idr thresholded peaks ENCSR715CCR ChIP-seq EFO:0002067 K562 cell line Homo sapiens DPF2-human ENCAB076EMA DNA False 2016-04-22 ENCODE 1, 2 ENCFF270KFK, ENCFF419RSJ, ENCFF604PYY, ENCFF866GQW 810140 ENCODE Processing Pipeline 2a578032f9978572c617f3bea687c6e1 https://www.encodeproject.org/files/ENCFF217ZTP/@@download/ENCFF217ZTP.bed.gz GRCh38 released missing control alignments ENCFF038VUN bigBed narrowPeak optimal idr thresholded peaks ENCSR715CCR ChIP-seq EFO:0002067 K562 cell line Homo sapiens DPF2-human ENCAB076EMA DNA False 2016-04-22 ENCODE 1, 2 ENCFF217ZTP 1777827 ENCODE Processing Pipeline c16bd18dedbfdce23d3fcaff583b6d6d https://www.encodeproject.org/files/ENCFF038VUN/@@download/ENCFF038VUN.bigBed GRCh38 released missing control alignments ENCFF750WTZ bigWig signal p-value ENCSR715CCR ChIP-seq EFO:0002067 K562 cell line Homo sapiens DPF2-human ENCAB076EMA DNA False 2016-04-22 ENCODE 2 ENCFF051LWI, ENCFF275MTH 1150640035 ENCODE Processing Pipeline 58a56eb33f9bae962fcbdfb141edac2a https://www.encodeproject.org/files/ENCFF750WTZ/@@download/ENCFF750WTZ.bigWig hg19 released missing control alignments ENCFF515FHT bigWig fold change over control ENCSR715CCR ChIP-seq EFO:0002067 K562 cell line Homo sapiens DPF2-human ENCAB076EMA DNA False 2016-04-22 ENCODE 2 ENCFF051LWI, ENCFF275MTH 1100858289 ENCODE Processing Pipeline b3fe3e1298d575dda9082ecbbd7a9e0e https://www.encodeproject.org/files/ENCFF515FHT/@@download/ENCFF515FHT.bigWig hg19 released missing control alignments ENCFF023VOJ bed narrowPeak peaks ENCSR715CCR ChIP-seq EFO:0002067 K562 cell line Homo sapiens DPF2-human ENCAB076EMA DNA False 2016-04-22 ENCODE 1 ENCFF419BCJ, ENCFF581ZJL 7181376 ENCODE Processing Pipeline 3083a486dc1b0b3129c6eff438f6bf88 https://www.encodeproject.org/files/ENCFF023VOJ/@@download/ENCFF023VOJ.bed.gz hg19 released missing control alignments ENCFF577FLU bed narrowPeak peaks ENCSR715CCR ChIP-seq EFO:0002067 K562 cell line Homo sapiens DPF2-human ENCAB076EMA DNA False 2016-04-22 ENCODE 1, 2 ENCFF051LWI, ENCFF275MTH, ENCFF419BCJ, ENCFF581ZJL 7073849 ENCODE Processing Pipeline 79d74b742addce40d1078d853ff2a677 https://www.encodeproject.org/files/ENCFF577FLU/@@download/ENCFF577FLU.bed.gz hg19 released missing control alignments ENCFF918XMD bigBed narrowPeak peaks ENCSR715CCR ChIP-seq EFO:0002067 K562 cell line Homo sapiens DPF2-human ENCAB076EMA DNA False 2016-04-22 ENCODE 2 ENCFF994IZJ 12680018 ENCODE Processing Pipeline 6b0ea31a2afd440a176b792a32dd75c9 https://www.encodeproject.org/files/ENCFF918XMD/@@download/ENCFF918XMD.bigBed hg19 released missing control alignments ENCFF638WVV bigBed narrowPeak peaks ENCSR715CCR ChIP-seq EFO:0002067 K562 cell line Homo sapiens DPF2-human ENCAB076EMA DNA False 2016-04-22 ENCODE 1, 2 ENCFF577FLU 12452617 ENCODE Processing Pipeline 720d82b28b470e59e1eae108dcb1adc4 https://www.encodeproject.org/files/ENCFF638WVV/@@download/ENCFF638WVV.bigBed hg19 released missing control alignments ENCFF206HJJ bed narrowPeak conservative idr thresholded peaks ENCSR715CCR ChIP-seq EFO:0002067 K562 cell line Homo sapiens DPF2-human ENCAB076EMA DNA False 2016-04-22 ENCODE 1, 2 ENCFF001TDO, ENCFF023VOJ, ENCFF577FLU, ENCFF994IZJ 721887 ENCODE Processing Pipeline 233433cd141483e4d68e08405ce9eebf https://www.encodeproject.org/files/ENCFF206HJJ/@@download/ENCFF206HJJ.bed.gz hg19 released missing control alignments ENCFF823SYE bed narrowPeak optimal idr thresholded peaks ENCSR715CCR ChIP-seq EFO:0002067 K562 cell line Homo sapiens DPF2-human ENCAB076EMA DNA False 2016-04-22 ENCODE 1, 2 ENCFF001TDO, ENCFF023VOJ, ENCFF577FLU, ENCFF994IZJ 812173 ENCODE Processing Pipeline 59b72560947ff818b0d51aac88596a9b https://www.encodeproject.org/files/ENCFF823SYE/@@download/ENCFF823SYE.bed.gz hg19 released missing control alignments ENCFF297CCE bigBed narrowPeak peaks ENCSR715CCR ChIP-seq EFO:0002067 K562 cell line Homo sapiens DPF2-human ENCAB076EMA DNA False 2016-04-22 ENCODE 1 ENCFF023VOJ 12750939 ENCODE Processing Pipeline 8ab3cb978c6abdce6b9d5f8e96ea5a4c https://www.encodeproject.org/files/ENCFF297CCE/@@download/ENCFF297CCE.bigBed hg19 released missing control alignments ENCFF994IZJ bed narrowPeak peaks ENCSR715CCR ChIP-seq EFO:0002067 K562 cell line Homo sapiens DPF2-human ENCAB076EMA DNA False 2016-04-22 ENCODE 2 ENCFF051LWI, ENCFF275MTH 7191587 ENCODE Processing Pipeline 36d1b5a86c8378751f9dce955bef0765 https://www.encodeproject.org/files/ENCFF994IZJ/@@download/ENCFF994IZJ.bed.gz hg19 released missing control alignments ENCFF547VWB bigBed narrowPeak conservative idr thresholded peaks ENCSR715CCR ChIP-seq EFO:0002067 K562 cell line Homo sapiens DPF2-human ENCAB076EMA DNA False 2016-04-22 ENCODE 1, 2 ENCFF206HJJ 1275524 ENCODE Processing Pipeline 35c95fb2202da5fbabb8932f4a9899c3 https://www.encodeproject.org/files/ENCFF547VWB/@@download/ENCFF547VWB.bigBed hg19 released missing control alignments ENCFF445BRV bigBed narrowPeak optimal idr thresholded peaks ENCSR715CCR ChIP-seq EFO:0002067 K562 cell line Homo sapiens DPF2-human ENCAB076EMA DNA False 2016-04-22 ENCODE 1, 2 ENCFF823SYE 1779591 ENCODE Processing Pipeline e011016dfb5141336a5276176b6c9f5f https://www.encodeproject.org/files/ENCFF445BRV/@@download/ENCFF445BRV.bigBed hg19 released missing control alignments ENCFF738EEY fastq reads ENCSR296MXW ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPUL1-human ENCAB083GDM DNA SDS formaldehyde False 2017-02-27 ENCODE 1 1 40 single-ended 1224039899 Xiang-Dong Fu, UCSD d9e65d565b0b2bb4aff7cd944774fdd9 SRA:SRR6213048 https://www.encodeproject.org/files/ENCFF738EEY/@@download/ENCFF738EEY.fastq.gz Illumina HiSeq 2500 /files/ENCFF025UQF/ released low read depth, low read length ENCFF235VMD fastq reads ENCSR296MXW ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPUL1-human ENCAB083GDM DNA SDS formaldehyde False 2017-02-27 ENCODE 2 1 40 single-ended 1079697852 Xiang-Dong Fu, UCSD a4a08c51fbb65dc721b915c687d8310d SRA:SRR6213047 https://www.encodeproject.org/files/ENCFF235VMD/@@download/ENCFF235VMD.fastq.gz Illumina HiSeq 2500 /files/ENCFF201ZVH/ released low read depth, low read length ENCFF173YSU bam alignments ENCSR296MXW ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPUL1-human ENCAB083GDM DNA SDS formaldehyde False 2017-02-27 ENCODE 1 40 ENCFF738EEY, ENCFF807MUK 871090391 ENCODE Processing Pipeline 5d35b7f0f65cc290d4de3bb1e6f9d4b0 https://www.encodeproject.org/files/ENCFF173YSU/@@download/ENCFF173YSU.bam hg19 released low read depth, low read length ENCFF544YTS bam unfiltered alignments ENCSR296MXW ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPUL1-human ENCAB083GDM DNA SDS formaldehyde False 2017-02-27 ENCODE 2 40 ENCFF235VMD, ENCFF807MUK 1425409100 ENCODE Processing Pipeline 27abee42cdaaffa65f260f55c61d16d3 https://www.encodeproject.org/files/ENCFF544YTS/@@download/ENCFF544YTS.bam hg19 released low read depth, low read length ENCFF084EMC bam alignments ENCSR296MXW ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPUL1-human ENCAB083GDM DNA SDS formaldehyde False 2017-02-27 ENCODE 2 40 ENCFF235VMD, ENCFF807MUK 784990205 ENCODE Processing Pipeline 5759b2a25d5349236b1ea6eac08cf1f5 https://www.encodeproject.org/files/ENCFF084EMC/@@download/ENCFF084EMC.bam hg19 released low read depth, low read length ENCFF477DLR bam unfiltered alignments ENCSR296MXW ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPUL1-human ENCAB083GDM DNA SDS formaldehyde False 2017-02-27 ENCODE 1 40 ENCFF738EEY, ENCFF807MUK 1606466362 ENCODE Processing Pipeline 184ddbde954c7a389edab809a605a024 https://www.encodeproject.org/files/ENCFF477DLR/@@download/ENCFF477DLR.bam hg19 released low read depth, low read length ENCFF293IAH bam unfiltered alignments ENCSR296MXW ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPUL1-human ENCAB083GDM DNA SDS formaldehyde False 2017-02-27 ENCODE 2 40 ENCFF235VMD, ENCFF643CGH 1431027568 ENCODE Processing Pipeline 52bf304edf01659f5b06c12a08f8cd8b https://www.encodeproject.org/files/ENCFF293IAH/@@download/ENCFF293IAH.bam GRCh38 released low read depth, low read length ENCFF733RTM bam alignments ENCSR296MXW ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPUL1-human ENCAB083GDM DNA SDS formaldehyde False 2017-02-27 ENCODE 2 40 ENCFF235VMD, ENCFF643CGH 784159636 ENCODE Processing Pipeline ad798f2ef29d13ec5fcee1a649af4a8d https://www.encodeproject.org/files/ENCFF733RTM/@@download/ENCFF733RTM.bam GRCh38 released low read depth, low read length ENCFF429WCK bam unfiltered alignments ENCSR296MXW ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPUL1-human ENCAB083GDM DNA SDS formaldehyde False 2017-02-27 ENCODE 1 40 ENCFF643CGH, ENCFF738EEY 1612606777 ENCODE Processing Pipeline 07c2f4dcca1b458b1849c66f6456baa4 https://www.encodeproject.org/files/ENCFF429WCK/@@download/ENCFF429WCK.bam GRCh38 released low read depth, low read length ENCFF275XJW bam alignments ENCSR296MXW ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPUL1-human ENCAB083GDM DNA SDS formaldehyde False 2017-02-27 ENCODE 1 40 ENCFF643CGH, ENCFF738EEY 870156852 ENCODE Processing Pipeline 0f64a709f55efc378089d7cf30b052ca https://www.encodeproject.org/files/ENCFF275XJW/@@download/ENCFF275XJW.bam GRCh38 released low read depth, low read length ENCFF823KNI bigWig signal p-value ENCSR296MXW ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPUL1-human ENCAB083GDM DNA SDS formaldehyde False 2017-02-27 ENCODE 2 ENCFF084EMC, ENCFF705ZEH 439359455 ENCODE Processing Pipeline b87e029da225a9bf29759a1d2281f6a3 https://www.encodeproject.org/files/ENCFF823KNI/@@download/ENCFF823KNI.bigWig hg19 released low read depth, low read length ENCFF950KEH bigWig signal p-value ENCSR296MXW ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPUL1-human ENCAB083GDM DNA SDS formaldehyde False 2017-02-27 ENCODE 1 ENCFF173YSU, ENCFF477SGV 585217368 ENCODE Processing Pipeline 2385996fdf0650c4955bb3114990db06 https://www.encodeproject.org/files/ENCFF950KEH/@@download/ENCFF950KEH.bigWig hg19 released low read depth, low read length ENCFF481PYR bigWig signal p-value ENCSR296MXW ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPUL1-human ENCAB083GDM DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF084EMC, ENCFF173YSU, ENCFF477SGV, ENCFF705ZEH 1013190887 ENCODE Processing Pipeline 9c49e97f4863825f2cc41db3f750b5ac https://www.encodeproject.org/files/ENCFF481PYR/@@download/ENCFF481PYR.bigWig hg19 released low read depth, low read length ENCFF920IAI bigWig fold change over control ENCSR296MXW ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPUL1-human ENCAB083GDM DNA SDS formaldehyde False 2017-02-27 ENCODE 1 ENCFF173YSU, ENCFF477SGV 461993619 ENCODE Processing Pipeline cff0c31be2850b0990e26f00cccd4f23 https://www.encodeproject.org/files/ENCFF920IAI/@@download/ENCFF920IAI.bigWig hg19 released low read depth, low read length ENCFF648RFW bed narrowPeak peaks ENCSR296MXW ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPUL1-human ENCAB083GDM DNA SDS formaldehyde False 2017-02-27 ENCODE 2 ENCFF084EMC, ENCFF705ZEH 4953053 ENCODE Processing Pipeline 003ea0a0ffa5b64321cb1dd310dd88df https://www.encodeproject.org/files/ENCFF648RFW/@@download/ENCFF648RFW.bed.gz hg19 released low read depth, low read length ENCFF056OUU bed narrowPeak conservative idr thresholded peaks ENCSR296MXW ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPUL1-human ENCAB083GDM DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF001TDO, ENCFF036VGX, ENCFF648RFW, ENCFF788AWO 16014 ENCODE Processing Pipeline 5f42da5b4e79bde9d54891c606a3f7f4 https://www.encodeproject.org/files/ENCFF056OUU/@@download/ENCFF056OUU.bed.gz hg19 released low read depth, low read length ENCFF553KXA bigBed narrowPeak conservative idr thresholded peaks ENCSR296MXW ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPUL1-human ENCAB083GDM DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF056OUU 109991 ENCODE Processing Pipeline 66ce4963a64933fce3bfc0541918210a https://www.encodeproject.org/files/ENCFF553KXA/@@download/ENCFF553KXA.bigBed hg19 released low read depth, low read length ENCFF102DKZ bigWig fold change over control ENCSR296MXW ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPUL1-human ENCAB083GDM DNA SDS formaldehyde False 2017-02-27 ENCODE 2 ENCFF084EMC, ENCFF705ZEH 427525377 ENCODE Processing Pipeline 2c1faae008525e7abefc56a74c456b22 https://www.encodeproject.org/files/ENCFF102DKZ/@@download/ENCFF102DKZ.bigWig hg19 released low read depth, low read length ENCFF036VGX bed narrowPeak peaks ENCSR296MXW ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPUL1-human ENCAB083GDM DNA SDS formaldehyde False 2017-02-27 ENCODE 1 ENCFF173YSU, ENCFF477SGV 5188554 ENCODE Processing Pipeline 29ae6be478f6d1e855a650659b303726 https://www.encodeproject.org/files/ENCFF036VGX/@@download/ENCFF036VGX.bed.gz hg19 released low read depth, low read length ENCFF788AWO bed narrowPeak peaks ENCSR296MXW ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPUL1-human ENCAB083GDM DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF084EMC, ENCFF173YSU, ENCFF477SGV, ENCFF705ZEH 6582763 ENCODE Processing Pipeline 79cec121b6dc893b0ff6bbbb0ead043c https://www.encodeproject.org/files/ENCFF788AWO/@@download/ENCFF788AWO.bed.gz hg19 released low read depth, low read length ENCFF516SIE bigBed narrowPeak optimal idr thresholded peaks ENCSR296MXW ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPUL1-human ENCAB083GDM DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF768TJI 125470 ENCODE Processing Pipeline 44d0bba8def55a00abb332e1c0ed6b0d https://www.encodeproject.org/files/ENCFF516SIE/@@download/ENCFF516SIE.bigBed hg19 released low read depth, low read length ENCFF195XFH bigWig fold change over control ENCSR296MXW ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPUL1-human ENCAB083GDM DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF084EMC, ENCFF173YSU, ENCFF477SGV, ENCFF705ZEH 956440316 ENCODE Processing Pipeline 79190423ab9b53e56755479e9127b521 https://www.encodeproject.org/files/ENCFF195XFH/@@download/ENCFF195XFH.bigWig hg19 released low read depth, low read length ENCFF634JXW bigBed narrowPeak peaks ENCSR296MXW ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPUL1-human ENCAB083GDM DNA SDS formaldehyde False 2017-02-27 ENCODE 1 ENCFF036VGX 11023086 ENCODE Processing Pipeline 42a528078853d1eaa474341d0844ec6d https://www.encodeproject.org/files/ENCFF634JXW/@@download/ENCFF634JXW.bigBed hg19 released low read depth, low read length ENCFF662VOP bigBed narrowPeak peaks ENCSR296MXW ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPUL1-human ENCAB083GDM DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF788AWO 13214447 ENCODE Processing Pipeline 4193d675eca939d76fd3750c7eca53da https://www.encodeproject.org/files/ENCFF662VOP/@@download/ENCFF662VOP.bigBed hg19 released low read depth, low read length ENCFF284GPL bigBed narrowPeak peaks ENCSR296MXW ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPUL1-human ENCAB083GDM DNA SDS formaldehyde False 2017-02-27 ENCODE 2 ENCFF648RFW 10952191 ENCODE Processing Pipeline 41f752e6302f054eeff9f69369adaca4 https://www.encodeproject.org/files/ENCFF284GPL/@@download/ENCFF284GPL.bigBed hg19 released low read depth, low read length ENCFF768TJI bed narrowPeak optimal idr thresholded peaks ENCSR296MXW ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPUL1-human ENCAB083GDM DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF001TDO, ENCFF036VGX, ENCFF648RFW, ENCFF788AWO 22390 ENCODE Processing Pipeline 00fee95f4f1764d51955ea63e1ac41fe https://www.encodeproject.org/files/ENCFF768TJI/@@download/ENCFF768TJI.bed.gz hg19 released low read depth, low read length ENCFF227KQP bigWig signal p-value ENCSR296MXW ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPUL1-human ENCAB083GDM DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF198JCQ, ENCFF275XJW, ENCFF308PSW, ENCFF733RTM 888596024 ENCODE Processing Pipeline d54ab432fb73a8775e84c75d8e427262 https://www.encodeproject.org/files/ENCFF227KQP/@@download/ENCFF227KQP.bigWig GRCh38 released low read depth, low read length ENCFF958OKS bigWig signal p-value ENCSR296MXW ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPUL1-human ENCAB083GDM DNA SDS formaldehyde False 2017-02-27 ENCODE 1 ENCFF275XJW, ENCFF308PSW 588107684 ENCODE Processing Pipeline d105c8b3489e0ebcefa5f7e1fc167a3f https://www.encodeproject.org/files/ENCFF958OKS/@@download/ENCFF958OKS.bigWig GRCh38 released low read depth, low read length ENCFF062UJT bigWig fold change over control ENCSR296MXW ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPUL1-human ENCAB083GDM DNA SDS formaldehyde False 2017-02-27 ENCODE 1 ENCFF275XJW, ENCFF308PSW 454200423 ENCODE Processing Pipeline 530f4c295f3d52e9b763d18a79b10707 https://www.encodeproject.org/files/ENCFF062UJT/@@download/ENCFF062UJT.bigWig GRCh38 released low read depth, low read length ENCFF765KAI bigWig signal p-value ENCSR296MXW ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPUL1-human ENCAB083GDM DNA SDS formaldehyde False 2017-02-27 ENCODE 2 ENCFF198JCQ, ENCFF733RTM 505246184 ENCODE Processing Pipeline db299fcce2a2c802f18a7994ab12ad7b https://www.encodeproject.org/files/ENCFF765KAI/@@download/ENCFF765KAI.bigWig GRCh38 released low read depth, low read length ENCFF776MBR bigWig fold change over control ENCSR296MXW ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPUL1-human ENCAB083GDM DNA SDS formaldehyde False 2017-02-27 ENCODE 2 ENCFF198JCQ, ENCFF733RTM 436181096 ENCODE Processing Pipeline cd2279bc3c0b92f510f47abb9e8d313f https://www.encodeproject.org/files/ENCFF776MBR/@@download/ENCFF776MBR.bigWig GRCh38 released low read depth, low read length ENCFF234JHW bed narrowPeak peaks ENCSR296MXW ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPUL1-human ENCAB083GDM DNA SDS formaldehyde False 2017-02-27 ENCODE 1 ENCFF275XJW, ENCFF308PSW 5115499 ENCODE Processing Pipeline 72bbc03ca1eaed42953d9acb947d8167 https://www.encodeproject.org/files/ENCFF234JHW/@@download/ENCFF234JHW.bed.gz GRCh38 released low read depth, low read length ENCFF389SYQ bed narrowPeak peaks ENCSR296MXW ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPUL1-human ENCAB083GDM DNA SDS formaldehyde False 2017-02-27 ENCODE 2 ENCFF198JCQ, ENCFF733RTM 4943661 ENCODE Processing Pipeline 97946a4c356f6bfe13b1ab78f05ef026 https://www.encodeproject.org/files/ENCFF389SYQ/@@download/ENCFF389SYQ.bed.gz GRCh38 released low read depth, low read length ENCFF404GRH bed narrowPeak peaks ENCSR296MXW ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPUL1-human ENCAB083GDM DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF198JCQ, ENCFF275XJW, ENCFF308PSW, ENCFF733RTM 6541886 ENCODE Processing Pipeline 2d73fb6b3b5609bcec17bce7cc0f5279 https://www.encodeproject.org/files/ENCFF404GRH/@@download/ENCFF404GRH.bed.gz GRCh38 released low read depth, low read length ENCFF461DIC bigWig fold change over control ENCSR296MXW ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPUL1-human ENCAB083GDM DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF198JCQ, ENCFF275XJW, ENCFF308PSW, ENCFF733RTM 944823877 ENCODE Processing Pipeline 90700abd3462d9b65b52b6f7711c8c30 https://www.encodeproject.org/files/ENCFF461DIC/@@download/ENCFF461DIC.bigWig GRCh38 released low read depth, low read length ENCFF936KAN bigBed narrowPeak peaks ENCSR296MXW ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPUL1-human ENCAB083GDM DNA SDS formaldehyde False 2017-02-27 ENCODE 1 ENCFF234JHW 11011660 ENCODE Processing Pipeline d0e45dd9e8ba71c5c0281ccafa4c85c3 https://www.encodeproject.org/files/ENCFF936KAN/@@download/ENCFF936KAN.bigBed GRCh38 released low read depth, low read length ENCFF608OEE bigBed narrowPeak peaks ENCSR296MXW ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPUL1-human ENCAB083GDM DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF404GRH 13230571 ENCODE Processing Pipeline 712f6e7377af59ccfdaf7897e407c159 https://www.encodeproject.org/files/ENCFF608OEE/@@download/ENCFF608OEE.bigBed GRCh38 released low read depth, low read length ENCFF209OKY bed narrowPeak conservative idr thresholded peaks ENCSR296MXW ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPUL1-human ENCAB083GDM DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF234JHW, ENCFF389SYQ, ENCFF404GRH, ENCFF419RSJ 15844 ENCODE Processing Pipeline 8b25431c86eeac4ca2d5b9d8728c0608 https://www.encodeproject.org/files/ENCFF209OKY/@@download/ENCFF209OKY.bed.gz GRCh38 released low read depth, low read length ENCFF051FLZ bigBed narrowPeak conservative idr thresholded peaks ENCSR296MXW ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPUL1-human ENCAB083GDM DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF209OKY 111167 ENCODE Processing Pipeline 26560e521aa588cdcd96c099656bf543 https://www.encodeproject.org/files/ENCFF051FLZ/@@download/ENCFF051FLZ.bigBed GRCh38 released low read depth, low read length ENCFF319GZK bigBed narrowPeak peaks ENCSR296MXW ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPUL1-human ENCAB083GDM DNA SDS formaldehyde False 2017-02-27 ENCODE 2 ENCFF389SYQ 10952584 ENCODE Processing Pipeline 7f9bca53877a8c7b9acdea351f4de268 https://www.encodeproject.org/files/ENCFF319GZK/@@download/ENCFF319GZK.bigBed GRCh38 released low read depth, low read length ENCFF991ZSC bed narrowPeak optimal idr thresholded peaks ENCSR296MXW ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPUL1-human ENCAB083GDM DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF234JHW, ENCFF389SYQ, ENCFF404GRH, ENCFF419RSJ 21270 ENCODE Processing Pipeline 8adf2bec91d77edc1bf53b8b6b388a0b https://www.encodeproject.org/files/ENCFF991ZSC/@@download/ENCFF991ZSC.bed.gz GRCh38 released low read depth, low read length ENCFF496LDY bigBed narrowPeak optimal idr thresholded peaks ENCSR296MXW ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPUL1-human ENCAB083GDM DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF991ZSC 124849 ENCODE Processing Pipeline 15167947cd0aaee05560afa9a121d6fb https://www.encodeproject.org/files/ENCFF496LDY/@@download/ENCFF496LDY.bigBed GRCh38 released low read depth, low read length ENCFF000YSW bam alignments ENCSR000EGX ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAFK-human ENCAB000AIJ DNA see document see document False 2011-10-29 ENCODE 1 ENCFF000YUE 677537623 Michael Snyder, Stanford f0c84cc411041cf3317b9f0486f42ed0 https://www.encodeproject.org/files/ENCFF000YSW/@@download/ENCFF000YSW.bam hg19 archived inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF000YSX bigBed narrowPeak peaks ENCSR000EGX ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAFK-human ENCAB000AIJ DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF001VNR 2997131 Michael Snyder, Stanford dbf446d2c9db0a6ddd58ddb5d1978e19 https://www.encodeproject.org/files/ENCFF000YSX/@@download/ENCFF000YSX.bigBed hg19 archived inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF000YSY bam alignments ENCSR000EGX ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAFK-human ENCAB000AIJ DNA see document see document False 2011-10-29 ENCODE 2 ENCFF000YUC 645946860 Michael Snyder, Stanford dc72bf9cf4343870afa83d7436264ec9 https://www.encodeproject.org/files/ENCFF000YSY/@@download/ENCFF000YSY.bam hg19 archived inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF000YTC bigWig signal ENCSR000EGX ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAFK-human ENCAB000AIJ DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF000YSW, ENCFF000YSY 481939672 Michael Snyder, Stanford e4997b7c6ab93ef591ae3c44621981bb https://www.encodeproject.org/files/ENCFF000YTC/@@download/ENCFF000YTC.bigWig hg19 archived inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF000YUC fastq reads ENCSR000EGX ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAFK-human ENCAB000AIJ DNA see document see document False 2011-10-29 ENCODE 2 1 36 single-ended 1564876842 Michael Snyder, Stanford ee355c15808e1adc4b8564dfba4b8613 https://www.encodeproject.org/files/ENCFF000YUC/@@download/ENCFF000YUC.fastq.gz Illumina Genome Analyzer /files/ENCFF000YRB/ released inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF000YUE fastq reads ENCSR000EGX ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAFK-human ENCAB000AIJ DNA see document see document False 2011-10-29 ENCODE 1 1 36 single-ended 1859400786 Michael Snyder, Stanford 3fabefb50151564ad25736951479be89 https://www.encodeproject.org/files/ENCFF000YUE/@@download/ENCFF000YUE.fastq.gz Illumina Genome Analyzer /files/ENCFF000YRB/ released inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF001VNR bed narrowPeak peaks ENCSR000EGX ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAFK-human ENCAB000AIJ DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF000YSW, ENCFF000YSY 1395340 Michael Snyder, Stanford a1c38b95f48a0d8af3b086c6d817893b https://www.encodeproject.org/files/ENCFF001VNR/@@download/ENCFF001VNR.bed.gz hg19 archived inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF002CXC bed narrowPeak optimal idr thresholded peaks ENCSR000EGX ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAFK-human ENCAB000AIJ DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF000YSW, ENCFF000YSY 490515 ENCODE Consortium Analysis Working Group a22f865a9c3be78243d4c596c899686a https://www.encodeproject.org/files/ENCFF002CXC/@@download/ENCFF002CXC.bed.gz hg19 archived inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF684XPL bigBed narrowPeak optimal idr thresholded peaks ENCSR000EGX ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAFK-human ENCAB000AIJ DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF002CXC 1186545 ENCODE Consortium 97cdaf4780f9bced2308d2b9d134cca4 https://www.encodeproject.org/files/ENCFF684XPL/@@download/ENCFF684XPL.bigBed hg19 archived inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF049TZN bam unfiltered alignments ENCSR000EGX ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAFK-human ENCAB000AIJ DNA see document see document False 2011-10-29 ENCODE 1 36 ENCFF000YUE, ENCFF807MUK 2193142464 ENCODE Processing Pipeline ba87565509ef8da0a3f833b65ed41542 https://www.encodeproject.org/files/ENCFF049TZN/@@download/ENCFF049TZN.bam hg19 released inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF433CEB bam alignments ENCSR000EGX ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAFK-human ENCAB000AIJ DNA see document see document False 2011-10-29 ENCODE 1 36 ENCFF000YUE, ENCFF807MUK 1400504974 ENCODE Processing Pipeline 5b4bd00d6595c65618b034f0863a5e1c https://www.encodeproject.org/files/ENCFF433CEB/@@download/ENCFF433CEB.bam hg19 released inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF628SDY bam unfiltered alignments ENCSR000EGX ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAFK-human ENCAB000AIJ DNA see document see document False 2011-10-29 ENCODE 2 36 ENCFF000YUC, ENCFF807MUK 1850329881 ENCODE Processing Pipeline b57961eef8d85bf6701a1670fa3ce024 https://www.encodeproject.org/files/ENCFF628SDY/@@download/ENCFF628SDY.bam hg19 released inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF560QPO bam alignments ENCSR000EGX ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAFK-human ENCAB000AIJ DNA see document see document False 2011-10-29 ENCODE 2 36 ENCFF000YUC, ENCFF807MUK 1210494330 ENCODE Processing Pipeline 1b680f4d5493b1603040b79791df29fe https://www.encodeproject.org/files/ENCFF560QPO/@@download/ENCFF560QPO.bam hg19 released inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF660EKS bed narrowPeak peaks ENCSR000EGX ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAFK-human ENCAB000AIJ DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF433CEB, ENCFF560QPO, ENCFF710NTS 6291523 ENCODE Processing Pipeline 9ec9d8d02dedaae9c7d7129a641d1e45 https://www.encodeproject.org/files/ENCFF660EKS/@@download/ENCFF660EKS.bed.gz hg19 released inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF278TBG bigWig signal p-value ENCSR000EGX ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAFK-human ENCAB000AIJ DNA see document see document False 2011-10-29 ENCODE 1 ENCFF433CEB, ENCFF710NTS 543600095 ENCODE Processing Pipeline 47695a0ebb75e4aa989736ee22e659da https://www.encodeproject.org/files/ENCFF278TBG/@@download/ENCFF278TBG.bigWig hg19 released inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF239OMI bigWig signal p-value ENCSR000EGX ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAFK-human ENCAB000AIJ DNA see document see document False 2011-10-29 ENCODE 2 ENCFF560QPO, ENCFF710NTS 548396570 ENCODE Processing Pipeline d4de42177a6731046fc87c9a69e9006a https://www.encodeproject.org/files/ENCFF239OMI/@@download/ENCFF239OMI.bigWig hg19 released inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF554LML bigWig fold change over control ENCSR000EGX ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAFK-human ENCAB000AIJ DNA see document see document False 2011-10-29 ENCODE 2 ENCFF560QPO, ENCFF710NTS 530334198 ENCODE Processing Pipeline 179982727abbaf4ad330a3b1d9813c64 https://www.encodeproject.org/files/ENCFF554LML/@@download/ENCFF554LML.bigWig hg19 released inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF288PVF bigBed narrowPeak peaks ENCSR000EGX ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAFK-human ENCAB000AIJ DNA see document see document False 2011-10-29 ENCODE 2 ENCFF887IBL 11391995 ENCODE Processing Pipeline 5b20aa03ad2415d69e04007bd082d7d8 https://www.encodeproject.org/files/ENCFF288PVF/@@download/ENCFF288PVF.bigBed hg19 released inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF124UTT bigWig fold change over control ENCSR000EGX ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAFK-human ENCAB000AIJ DNA see document see document False 2011-10-29 ENCODE 1 ENCFF433CEB, ENCFF710NTS 561961116 ENCODE Processing Pipeline 5c413b2db58652e2cdeec7a05c17b622 https://www.encodeproject.org/files/ENCFF124UTT/@@download/ENCFF124UTT.bigWig hg19 released inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF887IBL bed narrowPeak peaks ENCSR000EGX ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAFK-human ENCAB000AIJ DNA see document see document False 2011-10-29 ENCODE 2 ENCFF560QPO, ENCFF710NTS 5347011 ENCODE Processing Pipeline 073cbf8f91573c530d13ce12e03197d0 https://www.encodeproject.org/files/ENCFF887IBL/@@download/ENCFF887IBL.bed.gz hg19 released inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF260NPW bigWig signal p-value ENCSR000EGX ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAFK-human ENCAB000AIJ DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF433CEB, ENCFF560QPO, ENCFF710NTS 537878626 ENCODE Processing Pipeline 6b03a771e269c28086898ab662c202dd https://www.encodeproject.org/files/ENCFF260NPW/@@download/ENCFF260NPW.bigWig hg19 released inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF327GIW bigBed narrowPeak peaks ENCSR000EGX ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAFK-human ENCAB000AIJ DNA see document see document False 2011-10-29 ENCODE 1 ENCFF072BMK 10726870 ENCODE Processing Pipeline 61fba53b1c48d714bb8fe94b7435caa6 https://www.encodeproject.org/files/ENCFF327GIW/@@download/ENCFF327GIW.bigBed hg19 released inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF715WON bed narrowPeak conservative idr thresholded peaks ENCSR000EGX ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAFK-human ENCAB000AIJ DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF001TDO, ENCFF072BMK, ENCFF660EKS, ENCFF887IBL 377511 ENCODE Processing Pipeline 0a5826ffba796be6f2b35d9d2e574962 https://www.encodeproject.org/files/ENCFF715WON/@@download/ENCFF715WON.bed.gz hg19 released inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF437JHE bigBed narrowPeak conservative idr thresholded peaks ENCSR000EGX ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAFK-human ENCAB000AIJ DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF715WON 737586 ENCODE Processing Pipeline c5d0055fcb2e7f97e5ad83d778c2c0be https://www.encodeproject.org/files/ENCFF437JHE/@@download/ENCFF437JHE.bigBed hg19 released inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF964KPV bigWig fold change over control ENCSR000EGX ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAFK-human ENCAB000AIJ DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF433CEB, ENCFF560QPO, ENCFF710NTS 884121362 ENCODE Processing Pipeline 6d5c0e7f04464a917dd9fe292b36ed69 https://www.encodeproject.org/files/ENCFF964KPV/@@download/ENCFF964KPV.bigWig hg19 released inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF072BMK bed narrowPeak peaks ENCSR000EGX ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAFK-human ENCAB000AIJ DNA see document see document False 2011-10-29 ENCODE 1 ENCFF433CEB, ENCFF710NTS 5075327 ENCODE Processing Pipeline baca76bc8dd54ade1118dfe4cbaefb37 https://www.encodeproject.org/files/ENCFF072BMK/@@download/ENCFF072BMK.bed.gz hg19 released inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF589ITD bigBed narrowPeak peaks ENCSR000EGX ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAFK-human ENCAB000AIJ DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF660EKS 13598089 ENCODE Processing Pipeline e3975cf3e155719d79dad4fd0789c65b https://www.encodeproject.org/files/ENCFF589ITD/@@download/ENCFF589ITD.bigBed hg19 released inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF812QPN bed narrowPeak optimal idr thresholded peaks ENCSR000EGX ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAFK-human ENCAB000AIJ DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF001TDO, ENCFF072BMK, ENCFF660EKS, ENCFF887IBL 482148 ENCODE Processing Pipeline 9508b48c5610d3882fe8c0e0e9bbd23e https://www.encodeproject.org/files/ENCFF812QPN/@@download/ENCFF812QPN.bed.gz hg19 released inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF973XWA bigBed narrowPeak optimal idr thresholded peaks ENCSR000EGX ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAFK-human ENCAB000AIJ DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF812QPN 885238 ENCODE Processing Pipeline ecb20279e4b8424937c062df3fb6bfdb https://www.encodeproject.org/files/ENCFF973XWA/@@download/ENCFF973XWA.bigBed hg19 released inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF914RBV bam unfiltered alignments ENCSR000EGX ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAFK-human ENCAB000AIJ DNA see document see document False 2011-10-29 ENCODE 2 36 ENCFF000YUC, ENCFF643CGH 1857788941 ENCODE Processing Pipeline 55e25986f7648e57d181230030ae452b https://www.encodeproject.org/files/ENCFF914RBV/@@download/ENCFF914RBV.bam GRCh38 released inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF762UBK bam unfiltered alignments ENCSR000EGX ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAFK-human ENCAB000AIJ DNA see document see document False 2011-10-29 ENCODE 1 36 ENCFF000YUE, ENCFF643CGH 2203454035 ENCODE Processing Pipeline 3cdbae50d1cd95b0f8cc581509d29f54 https://www.encodeproject.org/files/ENCFF762UBK/@@download/ENCFF762UBK.bam GRCh38 released inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF719OIE bam alignments ENCSR000EGX ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAFK-human ENCAB000AIJ DNA see document see document False 2011-10-29 ENCODE 1 36 ENCFF000YUE, ENCFF643CGH 1399685901 ENCODE Processing Pipeline f654126fbb4401cd532b42df3bbeb2bd https://www.encodeproject.org/files/ENCFF719OIE/@@download/ENCFF719OIE.bam GRCh38 released inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF852HSQ bam alignments ENCSR000EGX ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAFK-human ENCAB000AIJ DNA see document see document False 2011-10-29 ENCODE 2 36 ENCFF000YUC, ENCFF643CGH 1209743708 ENCODE Processing Pipeline 03ade9ed47ecd0c6068d1bcfa437c037 https://www.encodeproject.org/files/ENCFF852HSQ/@@download/ENCFF852HSQ.bam GRCh38 released inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF556ZFU bigWig signal p-value ENCSR000EGX ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAFK-human ENCAB000AIJ DNA see document see document False 2011-10-29 ENCODE 1 ENCFF023NGN, ENCFF719OIE 543136492 ENCODE Processing Pipeline 6052c769260512a17839344fc622c5df https://www.encodeproject.org/files/ENCFF556ZFU/@@download/ENCFF556ZFU.bigWig GRCh38 released inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF888NXI bigWig signal p-value ENCSR000EGX ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAFK-human ENCAB000AIJ DNA see document see document False 2011-10-29 ENCODE 2 ENCFF023NGN, ENCFF852HSQ 547809835 ENCODE Processing Pipeline f10e605f20076beb988e918e4fb5ef3b https://www.encodeproject.org/files/ENCFF888NXI/@@download/ENCFF888NXI.bigWig GRCh38 released inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF961BEV bigWig signal p-value ENCSR000EGX ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAFK-human ENCAB000AIJ DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF023NGN, ENCFF719OIE, ENCFF852HSQ 537414601 ENCODE Processing Pipeline eb5e772ae88ad9c3a18d68a2b8a1b6fe https://www.encodeproject.org/files/ENCFF961BEV/@@download/ENCFF961BEV.bigWig GRCh38 released inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF749NTS bigWig fold change over control ENCSR000EGX ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAFK-human ENCAB000AIJ DNA see document see document False 2011-10-29 ENCODE 1 ENCFF023NGN, ENCFF719OIE 563065343 ENCODE Processing Pipeline e915536990deac1db84f3457465fc3ee https://www.encodeproject.org/files/ENCFF749NTS/@@download/ENCFF749NTS.bigWig GRCh38 released inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF638LYL bigWig fold change over control ENCSR000EGX ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAFK-human ENCAB000AIJ DNA see document see document False 2011-10-29 ENCODE 2 ENCFF023NGN, ENCFF852HSQ 530551178 ENCODE Processing Pipeline 230058024323c6edaddde3fcef3d0961 https://www.encodeproject.org/files/ENCFF638LYL/@@download/ENCFF638LYL.bigWig GRCh38 released inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF509GUW bigWig fold change over control ENCSR000EGX ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAFK-human ENCAB000AIJ DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF023NGN, ENCFF719OIE, ENCFF852HSQ 887748762 ENCODE Processing Pipeline 2b7cd365f879a1e7a67e03139514b213 https://www.encodeproject.org/files/ENCFF509GUW/@@download/ENCFF509GUW.bigWig GRCh38 released inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF443MTV bed narrowPeak peaks ENCSR000EGX ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAFK-human ENCAB000AIJ DNA see document see document False 2011-10-29 ENCODE 1 ENCFF023NGN, ENCFF719OIE 4977725 ENCODE Processing Pipeline a1ebdeb28a843fcc36c0d28e5c631e62 https://www.encodeproject.org/files/ENCFF443MTV/@@download/ENCFF443MTV.bed.gz GRCh38 released inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF525DOE bed narrowPeak peaks ENCSR000EGX ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAFK-human ENCAB000AIJ DNA see document see document False 2011-10-29 ENCODE 2 ENCFF023NGN, ENCFF852HSQ 5123288 ENCODE Processing Pipeline a97292dbcdbc1fe9ddfbdfea9617ebe2 https://www.encodeproject.org/files/ENCFF525DOE/@@download/ENCFF525DOE.bed.gz GRCh38 released inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF485UCS bigBed narrowPeak peaks ENCSR000EGX ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAFK-human ENCAB000AIJ DNA see document see document False 2011-10-29 ENCODE 1 ENCFF443MTV 10572068 ENCODE Processing Pipeline 2d4a11e1a4fb37eb0f815489e6ef36ae https://www.encodeproject.org/files/ENCFF485UCS/@@download/ENCFF485UCS.bigBed GRCh38 released inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF420ZOS bed narrowPeak peaks ENCSR000EGX ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAFK-human ENCAB000AIJ DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF023NGN, ENCFF719OIE, ENCFF852HSQ 6102064 ENCODE Processing Pipeline 2a1788a5cadb7b0714d6deb620dceb88 https://www.encodeproject.org/files/ENCFF420ZOS/@@download/ENCFF420ZOS.bed.gz GRCh38 released inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF686XQH bigBed narrowPeak peaks ENCSR000EGX ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAFK-human ENCAB000AIJ DNA see document see document False 2011-10-29 ENCODE 2 ENCFF525DOE 11247837 ENCODE Processing Pipeline 2c68d7217f088e21c4163adfa8667e19 https://www.encodeproject.org/files/ENCFF686XQH/@@download/ENCFF686XQH.bigBed GRCh38 released inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF434LAW bigBed narrowPeak peaks ENCSR000EGX ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAFK-human ENCAB000AIJ DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF420ZOS 13565326 ENCODE Processing Pipeline a961108cede5be399e10f455a7d4bdf6 https://www.encodeproject.org/files/ENCFF434LAW/@@download/ENCFF434LAW.bigBed GRCh38 released inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF216COR bed narrowPeak conservative idr thresholded peaks ENCSR000EGX ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAFK-human ENCAB000AIJ DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF419RSJ, ENCFF420ZOS, ENCFF443MTV, ENCFF525DOE 377232 ENCODE Processing Pipeline 144e91de5892cda2efb5abb4a837127d https://www.encodeproject.org/files/ENCFF216COR/@@download/ENCFF216COR.bed.gz GRCh38 released inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF675LNQ bigBed narrowPeak conservative idr thresholded peaks ENCSR000EGX ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAFK-human ENCAB000AIJ DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF216COR 739743 ENCODE Processing Pipeline a843f68fc430fffd3122673087351a52 https://www.encodeproject.org/files/ENCFF675LNQ/@@download/ENCFF675LNQ.bigBed GRCh38 released inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF893SCL bed narrowPeak optimal idr thresholded peaks ENCSR000EGX ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAFK-human ENCAB000AIJ DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF419RSJ, ENCFF420ZOS, ENCFF443MTV, ENCFF525DOE 477127 ENCODE Processing Pipeline 71d744d2459018e65e97fef53e8a8ded https://www.encodeproject.org/files/ENCFF893SCL/@@download/ENCFF893SCL.bed.gz GRCh38 released inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF427JXO bigBed narrowPeak optimal idr thresholded peaks ENCSR000EGX ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAFK-human ENCAB000AIJ DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF893SCL 880892 ENCODE Processing Pipeline 8c392e64b449046ae54030cc5d927573 https://www.encodeproject.org/files/ENCFF427JXO/@@download/ENCFF427JXO.bigBed GRCh38 released inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF360UUK bam unfiltered alignments ENCSR197ALX ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDGF-human ENCAB173GGB DNA False 2016-08-05 ENCODE 2 100 ENCFF112IGA, ENCFF302OWI, ENCFF807MUK 5753257054 ENCODE Processing Pipeline 4ada1f0fd2a3f5f41b9cc2addc3cf801 https://www.encodeproject.org/files/ENCFF360UUK/@@download/ENCFF360UUK.bam hg19 released low read depth, antibody characterized with exemption missing control alignments ENCFF923GCZ bam unfiltered alignments ENCSR197ALX ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDGF-human ENCAB173GGB DNA False 2016-08-05 ENCODE 1 100 ENCFF256BLE, ENCFF513AFY, ENCFF807MUK 3349528489 ENCODE Processing Pipeline 129a84d6554f4ebdd1997df076a1acf6 https://www.encodeproject.org/files/ENCFF923GCZ/@@download/ENCFF923GCZ.bam hg19 released low read depth, antibody characterized with exemption missing control alignments ENCFF513AFY fastq reads ENCSR197ALX ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDGF-human ENCAB173GGB DNA False 2016-08-05 ENCODE 1 1 100 paired-ended 1 ENCFF256BLE 1458303186 Michael Snyder, Stanford 94818cffe6c93f4180b19c8d67dd5fe1 SRA:SRR5111224 https://www.encodeproject.org/files/ENCFF513AFY/@@download/ENCFF513AFY.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFF/ released low read depth, antibody characterized with exemption missing control alignments ENCFF302OWI fastq reads ENCSR197ALX ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDGF-human ENCAB173GGB DNA False 2016-08-05 ENCODE 2 1 100 paired-ended 2 ENCFF112IGA 2674444982 Michael Snyder, Stanford ae246d33423afc810e7e73d964979f81 SRA:SRR5111223 https://www.encodeproject.org/files/ENCFF302OWI/@@download/ENCFF302OWI.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFA/ released low read depth, antibody characterized with exemption missing control alignments ENCFF256BLE fastq reads ENCSR197ALX ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDGF-human ENCAB173GGB DNA False 2016-08-05 ENCODE 1 1 100 paired-ended 2 ENCFF513AFY 1532539854 Michael Snyder, Stanford df40de2b47e04c2a0766328c3fa45429 SRA:SRR5111224 https://www.encodeproject.org/files/ENCFF256BLE/@@download/ENCFF256BLE.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFH/ released low read depth, antibody characterized with exemption missing control alignments ENCFF112IGA fastq reads ENCSR197ALX ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDGF-human ENCAB173GGB DNA False 2016-08-05 ENCODE 2 1 100 paired-ended 1 ENCFF302OWI 2571466858 Michael Snyder, Stanford 7e4063348d974033489ed29e4b70516d SRA:SRR5111223 https://www.encodeproject.org/files/ENCFF112IGA/@@download/ENCFF112IGA.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFD/ released low read depth, antibody characterized with exemption missing control alignments ENCFF737QLL bam alignments ENCSR197ALX ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDGF-human ENCAB173GGB DNA False 2016-08-05 ENCODE 1 100 ENCFF256BLE, ENCFF513AFY, ENCFF807MUK 3013115466 ENCODE Processing Pipeline 177612309f4c13c4f497fd2a078e8bce https://www.encodeproject.org/files/ENCFF737QLL/@@download/ENCFF737QLL.bam hg19 released low read depth, antibody characterized with exemption missing control alignments ENCFF606HVQ bam alignments ENCSR197ALX ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDGF-human ENCAB173GGB DNA False 2016-08-05 ENCODE 2 100 ENCFF112IGA, ENCFF302OWI, ENCFF807MUK 4598364230 ENCODE Processing Pipeline bb1726a42f98048a56f582105d8eee32 https://www.encodeproject.org/files/ENCFF606HVQ/@@download/ENCFF606HVQ.bam hg19 released low read depth, antibody characterized with exemption missing control alignments ENCFF296XDP bigWig signal p-value ENCSR197ALX ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDGF-human ENCAB173GGB DNA False 2016-08-05 ENCODE 1 ENCFF581ZJL, ENCFF737QLL 974270306 ENCODE Processing Pipeline ca08ff03c2d6ab06d00df37981d86ba2 https://www.encodeproject.org/files/ENCFF296XDP/@@download/ENCFF296XDP.bigWig hg19 released low read depth, antibody characterized with exemption missing control alignments ENCFF876KLJ bigWig signal p-value ENCSR197ALX ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDGF-human ENCAB173GGB DNA False 2016-08-05 ENCODE 2 ENCFF051LWI, ENCFF606HVQ 1074895325 ENCODE Processing Pipeline e98466171e6699b54290d971122fbd4a https://www.encodeproject.org/files/ENCFF876KLJ/@@download/ENCFF876KLJ.bigWig hg19 released low read depth, antibody characterized with exemption missing control alignments ENCFF524ERC bigWig signal p-value ENCSR197ALX ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDGF-human ENCAB173GGB DNA False 2016-08-05 ENCODE 1, 2 ENCFF051LWI, ENCFF581ZJL, ENCFF606HVQ, ENCFF737QLL 2033181168 ENCODE Processing Pipeline 5bc5001d819ea64f2198e551d2b40140 https://www.encodeproject.org/files/ENCFF524ERC/@@download/ENCFF524ERC.bigWig hg19 released low read depth, antibody characterized with exemption missing control alignments ENCFF663JGI bigWig fold change over control ENCSR197ALX ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDGF-human ENCAB173GGB DNA False 2016-08-05 ENCODE 1 ENCFF581ZJL, ENCFF737QLL 1027291478 ENCODE Processing Pipeline b19c1024c41c59a6741899e6963701d6 https://www.encodeproject.org/files/ENCFF663JGI/@@download/ENCFF663JGI.bigWig hg19 released low read depth, antibody characterized with exemption missing control alignments ENCFF123YOS bigWig fold change over control ENCSR197ALX ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDGF-human ENCAB173GGB DNA False 2016-08-05 ENCODE 2 ENCFF051LWI, ENCFF606HVQ 1203073383 ENCODE Processing Pipeline ef52b1cc53330ff56b3ec43a664b8f8d https://www.encodeproject.org/files/ENCFF123YOS/@@download/ENCFF123YOS.bigWig hg19 released low read depth, antibody characterized with exemption missing control alignments ENCFF648GCQ bigWig fold change over control ENCSR197ALX ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDGF-human ENCAB173GGB DNA False 2016-08-05 ENCODE 1, 2 ENCFF051LWI, ENCFF581ZJL, ENCFF606HVQ, ENCFF737QLL 2024050708 ENCODE Processing Pipeline 730b5468a2778075746266f7868cf1b4 https://www.encodeproject.org/files/ENCFF648GCQ/@@download/ENCFF648GCQ.bigWig hg19 released low read depth, antibody characterized with exemption missing control alignments ENCFF385LTD bed narrowPeak peaks ENCSR197ALX ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDGF-human ENCAB173GGB DNA False 2016-08-05 ENCODE 2 ENCFF051LWI, ENCFF606HVQ 7102147 ENCODE Processing Pipeline fd18be84207ef924b9342b60af421079 https://www.encodeproject.org/files/ENCFF385LTD/@@download/ENCFF385LTD.bed.gz hg19 released low read depth, antibody characterized with exemption missing control alignments ENCFF409HKO bed narrowPeak peaks ENCSR197ALX ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDGF-human ENCAB173GGB DNA False 2016-08-05 ENCODE 1 ENCFF581ZJL, ENCFF737QLL 7041480 ENCODE Processing Pipeline 03f4452079d0de2dd45f193dde177e9a https://www.encodeproject.org/files/ENCFF409HKO/@@download/ENCFF409HKO.bed.gz hg19 released low read depth, antibody characterized with exemption missing control alignments ENCFF767WBP bigBed narrowPeak peaks ENCSR197ALX ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDGF-human ENCAB173GGB DNA False 2016-08-05 ENCODE 1 ENCFF409HKO 12314344 ENCODE Processing Pipeline be5fc8dc12e350450f8f138dfa2d8f96 https://www.encodeproject.org/files/ENCFF767WBP/@@download/ENCFF767WBP.bigBed hg19 released low read depth, antibody characterized with exemption missing control alignments ENCFF264KUV bed narrowPeak peaks ENCSR197ALX ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDGF-human ENCAB173GGB DNA False 2016-08-05 ENCODE 1, 2 ENCFF051LWI, ENCFF581ZJL, ENCFF606HVQ, ENCFF737QLL 7112874 ENCODE Processing Pipeline f02236fa69e0de342ead26e968d2998a https://www.encodeproject.org/files/ENCFF264KUV/@@download/ENCFF264KUV.bed.gz hg19 released low read depth, antibody characterized with exemption missing control alignments ENCFF460NRN bigBed narrowPeak peaks ENCSR197ALX ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDGF-human ENCAB173GGB DNA False 2016-08-05 ENCODE 2 ENCFF385LTD 12302498 ENCODE Processing Pipeline cbe64108ef5876a25d80e3b03ee2bdad https://www.encodeproject.org/files/ENCFF460NRN/@@download/ENCFF460NRN.bigBed hg19 released low read depth, antibody characterized with exemption missing control alignments ENCFF881IOM bigBed narrowPeak peaks ENCSR197ALX ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDGF-human ENCAB173GGB DNA False 2016-08-05 ENCODE 1, 2 ENCFF264KUV 12111706 ENCODE Processing Pipeline 6d5e3320495651e87ba07e59d25315d9 https://www.encodeproject.org/files/ENCFF881IOM/@@download/ENCFF881IOM.bigBed hg19 released low read depth, antibody characterized with exemption missing control alignments ENCFF761ABS bam unfiltered alignments ENCSR197ALX ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDGF-human ENCAB173GGB DNA False 2016-08-05 ENCODE 1 100 ENCFF256BLE, ENCFF513AFY, ENCFF643CGH 3351841399 ENCODE Processing Pipeline 5d49dc980c3402fa560a35c255ffd33a https://www.encodeproject.org/files/ENCFF761ABS/@@download/ENCFF761ABS.bam GRCh38 released low read depth, antibody characterized with exemption missing control alignments ENCFF847GWD bam unfiltered alignments ENCSR197ALX ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDGF-human ENCAB173GGB DNA False 2016-08-05 ENCODE 2 100 ENCFF112IGA, ENCFF302OWI, ENCFF643CGH 5757453772 ENCODE Processing Pipeline 0199ed89746200026fead9975147b214 https://www.encodeproject.org/files/ENCFF847GWD/@@download/ENCFF847GWD.bam GRCh38 released low read depth, antibody characterized with exemption missing control alignments ENCFF702WHX bam alignments ENCSR197ALX ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDGF-human ENCAB173GGB DNA False 2016-08-05 ENCODE 1 100 ENCFF256BLE, ENCFF513AFY, ENCFF643CGH 3014585643 ENCODE Processing Pipeline a30014b6c0bfdbf98db757d796412f93 https://www.encodeproject.org/files/ENCFF702WHX/@@download/ENCFF702WHX.bam GRCh38 released low read depth, antibody characterized with exemption missing control alignments ENCFF795OAZ bam alignments ENCSR197ALX ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDGF-human ENCAB173GGB DNA False 2016-08-05 ENCODE 2 100 ENCFF112IGA, ENCFF302OWI, ENCFF643CGH 4600461119 ENCODE Processing Pipeline 4bc2d9772a809a74c5d729cf060ed5ad https://www.encodeproject.org/files/ENCFF795OAZ/@@download/ENCFF795OAZ.bam GRCh38 released low read depth, antibody characterized with exemption missing control alignments ENCFF738ORJ bigWig signal p-value ENCSR197ALX ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDGF-human ENCAB173GGB DNA False 2016-08-05 ENCODE 1 ENCFF702WHX 1092272011 ENCODE Processing Pipeline 8b1bfeb40e5bdcccebf582e4ddaa670c https://www.encodeproject.org/files/ENCFF738ORJ/@@download/ENCFF738ORJ.bigWig GRCh38 released low read depth, antibody characterized with exemption missing control alignments ENCFF709NLW bigWig signal p-value ENCSR197ALX ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDGF-human ENCAB173GGB DNA False 2016-08-05 ENCODE 2 ENCFF795OAZ 1245493588 ENCODE Processing Pipeline d5664898b6afe2ba4da3caf5a10560c2 https://www.encodeproject.org/files/ENCFF709NLW/@@download/ENCFF709NLW.bigWig GRCh38 released low read depth, antibody characterized with exemption missing control alignments ENCFF319CGE bigWig signal p-value ENCSR197ALX ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDGF-human ENCAB173GGB DNA False 2016-08-05 ENCODE 1, 2 ENCFF702WHX, ENCFF795OAZ 1860921677 ENCODE Processing Pipeline 36632812c1780b9345efcd9de64f1343 https://www.encodeproject.org/files/ENCFF319CGE/@@download/ENCFF319CGE.bigWig GRCh38 released low read depth, antibody characterized with exemption missing control alignments ENCFF880ERG bigWig fold change over control ENCSR197ALX ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDGF-human ENCAB173GGB DNA False 2016-08-05 ENCODE 1 ENCFF702WHX 1016763281 ENCODE Processing Pipeline 741c2a0117612909eac6dce4f30db588 https://www.encodeproject.org/files/ENCFF880ERG/@@download/ENCFF880ERG.bigWig GRCh38 released low read depth, antibody characterized with exemption missing control alignments ENCFF066HHH bigWig fold change over control ENCSR197ALX ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDGF-human ENCAB173GGB DNA False 2016-08-05 ENCODE 2 ENCFF795OAZ 1169583995 ENCODE Processing Pipeline 0b825ed4e4c2f5bd19f429c24b2aadc7 https://www.encodeproject.org/files/ENCFF066HHH/@@download/ENCFF066HHH.bigWig GRCh38 released low read depth, antibody characterized with exemption missing control alignments ENCFF127ZFX bigWig fold change over control ENCSR197ALX ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDGF-human ENCAB173GGB DNA False 2016-08-05 ENCODE 1, 2 ENCFF702WHX, ENCFF795OAZ 2016159949 ENCODE Processing Pipeline 9afcb68d0c73150a4c0ed22068a2b2e8 https://www.encodeproject.org/files/ENCFF127ZFX/@@download/ENCFF127ZFX.bigWig GRCh38 released low read depth, antibody characterized with exemption missing control alignments ENCFF581OFS bed narrowPeak peaks ENCSR197ALX ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDGF-human ENCAB173GGB DNA False 2016-08-05 ENCODE 1 ENCFF702WHX 7003997 ENCODE Processing Pipeline 99bde86aa26b691a9b9937cde6c0f5cc https://www.encodeproject.org/files/ENCFF581OFS/@@download/ENCFF581OFS.bed.gz GRCh38 released low read depth, antibody characterized with exemption missing control alignments ENCFF983GOR bed narrowPeak peaks ENCSR197ALX ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDGF-human ENCAB173GGB DNA False 2016-08-05 ENCODE 2 ENCFF795OAZ 7078399 ENCODE Processing Pipeline 698ace53e4b4c68d26a6e00d7c312d88 https://www.encodeproject.org/files/ENCFF983GOR/@@download/ENCFF983GOR.bed.gz GRCh38 released low read depth, antibody characterized with exemption missing control alignments ENCFF871MFK bed narrowPeak peaks ENCSR197ALX ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDGF-human ENCAB173GGB DNA False 2016-08-05 ENCODE 1, 2 ENCFF702WHX, ENCFF795OAZ 7148530 ENCODE Processing Pipeline 8ab8234fcc58fd060b56ae8fb59226fc https://www.encodeproject.org/files/ENCFF871MFK/@@download/ENCFF871MFK.bed.gz GRCh38 released low read depth, antibody characterized with exemption missing control alignments ENCFF153LDL bigBed narrowPeak peaks ENCSR197ALX ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDGF-human ENCAB173GGB DNA False 2016-08-05 ENCODE 1 ENCFF581OFS 12327290 ENCODE Processing Pipeline 8af0b40fe3c6468897b3070ee5e69b6e https://www.encodeproject.org/files/ENCFF153LDL/@@download/ENCFF153LDL.bigBed GRCh38 released low read depth, antibody characterized with exemption missing control alignments ENCFF482VJO bigBed narrowPeak peaks ENCSR197ALX ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDGF-human ENCAB173GGB DNA False 2016-08-05 ENCODE 2 ENCFF983GOR 12315424 ENCODE Processing Pipeline f20d4510a19785b01a2415b0a5f9acd5 https://www.encodeproject.org/files/ENCFF482VJO/@@download/ENCFF482VJO.bigBed GRCh38 released low read depth, antibody characterized with exemption missing control alignments ENCFF832MJR bigBed narrowPeak peaks ENCSR197ALX ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDGF-human ENCAB173GGB DNA False 2016-08-05 ENCODE 1, 2 ENCFF871MFK 12163691 ENCODE Processing Pipeline b9f353b97e15d97ad9b50a6e97fe6e7c https://www.encodeproject.org/files/ENCFF832MJR/@@download/ENCFF832MJR.bigBed GRCh38 released low read depth, antibody characterized with exemption missing control alignments ENCFF086TFH bed narrowPeak conservative idr thresholded peaks ENCSR197ALX ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDGF-human ENCAB173GGB DNA False 2016-08-05 ENCODE 1, 2 ENCFF419RSJ, ENCFF581OFS, ENCFF871MFK, ENCFF983GOR 156026 ENCODE Processing Pipeline 3e2a35f05b37d2d39e8f35b71d5bfb9f https://www.encodeproject.org/files/ENCFF086TFH/@@download/ENCFF086TFH.bed.gz GRCh38 released low read depth, antibody characterized with exemption missing control alignments ENCFF778OGG bigBed narrowPeak conservative idr thresholded peaks ENCSR197ALX ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDGF-human ENCAB173GGB DNA False 2016-08-05 ENCODE 1, 2 ENCFF086TFH 359485 ENCODE Processing Pipeline 7e141a7965ddf54b80794174863b3d3e https://www.encodeproject.org/files/ENCFF778OGG/@@download/ENCFF778OGG.bigBed GRCh38 released low read depth, antibody characterized with exemption missing control alignments ENCFF575WFB bed narrowPeak optimal idr thresholded peaks ENCSR197ALX ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDGF-human ENCAB173GGB DNA False 2016-08-05 ENCODE 1, 2 ENCFF419RSJ, ENCFF581OFS, ENCFF871MFK, ENCFF983GOR 188401 ENCODE Processing Pipeline e902bd67ee5b2c86f079498a170f908d https://www.encodeproject.org/files/ENCFF575WFB/@@download/ENCFF575WFB.bed.gz GRCh38 released low read depth, antibody characterized with exemption missing control alignments ENCFF861WVI bigBed narrowPeak optimal idr thresholded peaks ENCSR197ALX ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDGF-human ENCAB173GGB DNA False 2016-08-05 ENCODE 1, 2 ENCFF575WFB 413639 ENCODE Processing Pipeline b0603d5b498c50d46bbf2b8109152e61 https://www.encodeproject.org/files/ENCFF861WVI/@@download/ENCFF861WVI.bigBed GRCh38 released low read depth, antibody characterized with exemption missing control alignments ENCFF565WKY bed narrowPeak conservative idr thresholded peaks ENCSR197ALX ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDGF-human ENCAB173GGB DNA False 2016-08-05 ENCODE 1, 2 ENCFF001TDO, ENCFF264KUV, ENCFF385LTD, ENCFF409HKO 137716 ENCODE Processing Pipeline 118789a9549ea886b6a5fad66d9cbb97 https://www.encodeproject.org/files/ENCFF565WKY/@@download/ENCFF565WKY.bed.gz hg19 released low read depth, antibody characterized with exemption missing control alignments ENCFF329YYQ bigBed narrowPeak conservative idr thresholded peaks ENCSR197ALX ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDGF-human ENCAB173GGB DNA False 2016-08-05 ENCODE 1, 2 ENCFF565WKY 277247 ENCODE Processing Pipeline 2f3437855326e63abaae81999f5ea653 https://www.encodeproject.org/files/ENCFF329YYQ/@@download/ENCFF329YYQ.bigBed hg19 released low read depth, antibody characterized with exemption missing control alignments ENCFF561WNI bed narrowPeak optimal idr thresholded peaks ENCSR197ALX ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDGF-human ENCAB173GGB DNA False 2016-08-05 ENCODE 1, 2 ENCFF001TDO, ENCFF264KUV, ENCFF385LTD, ENCFF409HKO 176911 ENCODE Processing Pipeline 938fcbd1e3573ad84cdb46925b19eb89 https://www.encodeproject.org/files/ENCFF561WNI/@@download/ENCFF561WNI.bed.gz hg19 released low read depth, antibody characterized with exemption missing control alignments ENCFF478GXH bigBed narrowPeak optimal idr thresholded peaks ENCSR197ALX ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDGF-human ENCAB173GGB DNA False 2016-08-05 ENCODE 1, 2 ENCFF561WNI 398551 ENCODE Processing Pipeline f8ba0000530ba26eed77d01549d395ef https://www.encodeproject.org/files/ENCFF478GXH/@@download/ENCFF478GXH.bigBed hg19 released low read depth, antibody characterized with exemption missing control alignments ENCFF309WXK bam unfiltered alignments ENCSR603XLW ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF589-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 50 ENCFF588TEN, ENCFF807MUK, ENCFF923QSF 1488593226 ENCODE Processing Pipeline 651a1a71d5819128dff804ae5dd02a2a https://www.encodeproject.org/files/ENCFF309WXK/@@download/ENCFF309WXK.bam hg19 released control low read depth, missing genetic modification characterization, low read depth ENCFF315FRH bam unfiltered alignments ENCSR603XLW ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF589-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 50 ENCFF168UBS, ENCFF807MUK, ENCFF971NWQ 1015526517 ENCODE Processing Pipeline 77d5ee862ab2d17ec768bd42cc4d382f https://www.encodeproject.org/files/ENCFF315FRH/@@download/ENCFF315FRH.bam hg19 released control low read depth, missing genetic modification characterization, low read depth ENCFF923QSF fastq reads ENCSR603XLW ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF589-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 1 50 single-ended 498322393 Kevin White, UChicago 742fd3974e5cca40e30aaf9a6eba5720 SRA:SRR6213062 https://www.encodeproject.org/files/ENCFF923QSF/@@download/ENCFF923QSF.fastq.gz Illumina HiSeq 2000 /files/ENCFF373VKP/ released control low read depth, missing genetic modification characterization, low read depth ENCFF971NWQ fastq reads ENCSR603XLW ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF589-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 1 50 single-ended 476156667 Kevin White, UChicago 4ff5a7d5af37ffdd70a247332dea7bf3 SRA:SRR6213064 https://www.encodeproject.org/files/ENCFF971NWQ/@@download/ENCFF971NWQ.fastq.gz Illumina HiSeq 2000 /files/ENCFF373VKP/ released control low read depth, missing genetic modification characterization, low read depth ENCFF168UBS fastq reads ENCSR603XLW ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF589-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 1 50 single-ended 495181237 Kevin White, UChicago 337781fcc728290d7e3269b39a2efc36 SRA:SRR6213065 https://www.encodeproject.org/files/ENCFF168UBS/@@download/ENCFF168UBS.fastq.gz Illumina HiSeq 2500 /files/ENCFF373VKP/ released control low read depth, missing genetic modification characterization, low read depth ENCFF588TEN fastq reads ENCSR603XLW ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF589-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 1 50 single-ended 902516416 Kevin White, UChicago 60fa6d987365ad7d46c7ae1bf15c8c4e SRA:SRR6213063 https://www.encodeproject.org/files/ENCFF588TEN/@@download/ENCFF588TEN.fastq.gz Illumina HiSeq 2500 /files/ENCFF373VKP/ released control low read depth, missing genetic modification characterization, low read depth ENCFF729JBY bam alignments ENCSR603XLW ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF589-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 50 ENCFF588TEN, ENCFF807MUK, ENCFF923QSF 1122534872 ENCODE Processing Pipeline f1872cf15242969a45f68090c383b71e https://www.encodeproject.org/files/ENCFF729JBY/@@download/ENCFF729JBY.bam hg19 released control low read depth, missing genetic modification characterization, low read depth ENCFF500XCK bam alignments ENCSR603XLW ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF589-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 50 ENCFF168UBS, ENCFF807MUK, ENCFF971NWQ 731309708 ENCODE Processing Pipeline 91a45b86ef9a0dee91d3d9af7c67cea4 https://www.encodeproject.org/files/ENCFF500XCK/@@download/ENCFF500XCK.bam hg19 released control low read depth, missing genetic modification characterization, low read depth ENCFF117NWF bigWig signal p-value ENCSR603XLW ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF589-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF500XCK, ENCFF743HYF 376168943 ENCODE Processing Pipeline a0fefcedac8006e34f4060648c80e5e8 https://www.encodeproject.org/files/ENCFF117NWF/@@download/ENCFF117NWF.bigWig hg19 released control low read depth, missing genetic modification characterization, low read depth ENCFF198VXO bigWig signal p-value ENCSR603XLW ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF589-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF500XCK, ENCFF729JBY, ENCFF743HYF 446148878 ENCODE Processing Pipeline 32447e9227f4aa70f808bdeb86ea70b6 https://www.encodeproject.org/files/ENCFF198VXO/@@download/ENCFF198VXO.bigWig hg19 released control low read depth, missing genetic modification characterization, low read depth ENCFF829ATU bigWig signal p-value ENCSR603XLW ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF589-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF729JBY, ENCFF743HYF 451791578 ENCODE Processing Pipeline a6b91e8badb6f36b92663fc4b25cd2ec https://www.encodeproject.org/files/ENCFF829ATU/@@download/ENCFF829ATU.bigWig hg19 released control low read depth, missing genetic modification characterization, low read depth ENCFF487DPZ bigWig fold change over control ENCSR603XLW ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF589-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF729JBY, ENCFF743HYF 487065523 ENCODE Processing Pipeline 5f09516d547f6e45b63e38e346bf2e53 https://www.encodeproject.org/files/ENCFF487DPZ/@@download/ENCFF487DPZ.bigWig hg19 released control low read depth, missing genetic modification characterization, low read depth ENCFF748LKT bigWig fold change over control ENCSR603XLW ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF589-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF500XCK, ENCFF743HYF 375646046 ENCODE Processing Pipeline 829d48d2a2747f852d11cabfa4032049 https://www.encodeproject.org/files/ENCFF748LKT/@@download/ENCFF748LKT.bigWig hg19 released control low read depth, missing genetic modification characterization, low read depth ENCFF784XPD bigWig fold change over control ENCSR603XLW ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF589-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF500XCK, ENCFF729JBY, ENCFF743HYF 698549701 ENCODE Processing Pipeline 5a8743ab6320f7a529404b3465c8c664 https://www.encodeproject.org/files/ENCFF784XPD/@@download/ENCFF784XPD.bigWig hg19 released control low read depth, missing genetic modification characterization, low read depth ENCFF470XSK bed narrowPeak peaks ENCSR603XLW ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF589-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF729JBY, ENCFF743HYF 6656025 ENCODE Processing Pipeline 60172433ce6edcbd05d4ded1bb9c513d https://www.encodeproject.org/files/ENCFF470XSK/@@download/ENCFF470XSK.bed.gz hg19 released control low read depth, missing genetic modification characterization, low read depth ENCFF783GCE bed narrowPeak peaks ENCSR603XLW ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF589-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF500XCK, ENCFF743HYF 6447846 ENCODE Processing Pipeline 7cb8cf2a71265a1596660d48d5838dec https://www.encodeproject.org/files/ENCFF783GCE/@@download/ENCFF783GCE.bed.gz hg19 released control low read depth, missing genetic modification characterization, low read depth ENCFF501ZPL bigBed narrowPeak peaks ENCSR603XLW ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF589-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF783GCE 12686571 ENCODE Processing Pipeline f31847fd99436aea6a19dec92ba1dc80 https://www.encodeproject.org/files/ENCFF501ZPL/@@download/ENCFF501ZPL.bigBed hg19 released control low read depth, missing genetic modification characterization, low read depth ENCFF524YHM bed narrowPeak peaks ENCSR603XLW ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF589-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF500XCK, ENCFF729JBY, ENCFF743HYF 7097897 ENCODE Processing Pipeline a21018d8f50da75f19a06ee928071dfc https://www.encodeproject.org/files/ENCFF524YHM/@@download/ENCFF524YHM.bed.gz hg19 released control low read depth, missing genetic modification characterization, low read depth ENCFF716LRJ bigBed narrowPeak peaks ENCSR603XLW ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF589-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF470XSK 12823457 ENCODE Processing Pipeline 08b13c74fb05d91b578bc8b341d8f716 https://www.encodeproject.org/files/ENCFF716LRJ/@@download/ENCFF716LRJ.bigBed hg19 released control low read depth, missing genetic modification characterization, low read depth ENCFF591BBK bigBed narrowPeak peaks ENCSR603XLW ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF589-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF524YHM 12701942 ENCODE Processing Pipeline 4d9615b983810b535420b82000cae1a6 https://www.encodeproject.org/files/ENCFF591BBK/@@download/ENCFF591BBK.bigBed hg19 released control low read depth, missing genetic modification characterization, low read depth ENCFF514JYU bam unfiltered alignments ENCSR603XLW ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF589-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 50 ENCFF168UBS, ENCFF643CGH, ENCFF971NWQ 1017873525 ENCODE Processing Pipeline f1e99afa87f29753bcf54871539a9020 https://www.encodeproject.org/files/ENCFF514JYU/@@download/ENCFF514JYU.bam GRCh38 released control low read depth, missing genetic modification characterization, low read depth ENCFF056SZG bam unfiltered alignments ENCSR603XLW ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF589-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 50 ENCFF588TEN, ENCFF643CGH, ENCFF923QSF 1492955607 ENCODE Processing Pipeline dce0a83333262097780738686da1219a https://www.encodeproject.org/files/ENCFF056SZG/@@download/ENCFF056SZG.bam GRCh38 released control low read depth, missing genetic modification characterization, low read depth ENCFF284MLL bam alignments ENCSR603XLW ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF589-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 50 ENCFF168UBS, ENCFF643CGH, ENCFF971NWQ 730792075 ENCODE Processing Pipeline 6acf6268341b5891ed1f4715454a5b46 https://www.encodeproject.org/files/ENCFF284MLL/@@download/ENCFF284MLL.bam GRCh38 released control low read depth, missing genetic modification characterization, low read depth ENCFF465ZZG bam alignments ENCSR603XLW ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF589-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 50 ENCFF588TEN, ENCFF643CGH, ENCFF923QSF 1121821316 ENCODE Processing Pipeline 2bc2ae30b53a1a225d6d53172a93d82b https://www.encodeproject.org/files/ENCFF465ZZG/@@download/ENCFF465ZZG.bam GRCh38 released control low read depth, missing genetic modification characterization, low read depth ENCFF752OAL bigWig fold change over control ENCSR603XLW ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF589-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF284MLL, ENCFF604MCA 370859307 ENCODE Processing Pipeline e11cd56eb9fa46cf72c39d6f6f959c61 https://www.encodeproject.org/files/ENCFF752OAL/@@download/ENCFF752OAL.bigWig GRCh38 released control low read depth, missing genetic modification characterization, low read depth ENCFF462NSW bigWig signal p-value ENCSR603XLW ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF589-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF465ZZG, ENCFF604MCA 451302144 ENCODE Processing Pipeline a21ce6e93109522bbcaf8bc189f1379c https://www.encodeproject.org/files/ENCFF462NSW/@@download/ENCFF462NSW.bigWig GRCh38 released control low read depth, missing genetic modification characterization, low read depth ENCFF166PZJ bigWig signal p-value ENCSR603XLW ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF589-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF284MLL, ENCFF465ZZG, ENCFF604MCA 439473127 ENCODE Processing Pipeline a481d9b05ab28667b92286d3e0014d43 https://www.encodeproject.org/files/ENCFF166PZJ/@@download/ENCFF166PZJ.bigWig GRCh38 released control low read depth, missing genetic modification characterization, low read depth ENCFF024ELS bigWig fold change over control ENCSR603XLW ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF589-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF465ZZG, ENCFF604MCA 485220445 ENCODE Processing Pipeline 71c4f7042f89a035e703f9e1d1ccc251 https://www.encodeproject.org/files/ENCFF024ELS/@@download/ENCFF024ELS.bigWig GRCh38 released control low read depth, missing genetic modification characterization, low read depth ENCFF473CJP bigWig fold change over control ENCSR603XLW ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF589-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF284MLL, ENCFF465ZZG, ENCFF604MCA 687372103 ENCODE Processing Pipeline 8091eb015077f0c1ea00f5c54f2d15b0 https://www.encodeproject.org/files/ENCFF473CJP/@@download/ENCFF473CJP.bigWig GRCh38 released control low read depth, missing genetic modification characterization, low read depth ENCFF086WCV bigWig signal p-value ENCSR603XLW ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF589-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF284MLL, ENCFF604MCA 399412250 ENCODE Processing Pipeline ada68967e1b83132c65b6157d064a90a https://www.encodeproject.org/files/ENCFF086WCV/@@download/ENCFF086WCV.bigWig GRCh38 released control low read depth, missing genetic modification characterization, low read depth ENCFF171ODU bed narrowPeak peaks ENCSR603XLW ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF589-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF465ZZG, ENCFF604MCA 6518232 ENCODE Processing Pipeline 2dfb7b420ed4b9f47b9ce1c04ba11381 https://www.encodeproject.org/files/ENCFF171ODU/@@download/ENCFF171ODU.bed.gz GRCh38 released control low read depth, missing genetic modification characterization, low read depth ENCFF143EAJ bed narrowPeak peaks ENCSR603XLW ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF589-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF284MLL, ENCFF465ZZG, ENCFF604MCA 6967893 ENCODE Processing Pipeline 92ed1c21f494efc6d9f67a799a0c42c4 https://www.encodeproject.org/files/ENCFF143EAJ/@@download/ENCFF143EAJ.bed.gz GRCh38 released control low read depth, missing genetic modification characterization, low read depth ENCFF869OFC bigBed narrowPeak peaks ENCSR603XLW ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF589-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF143EAJ 12717459 ENCODE Processing Pipeline 5d204d37e1d3fffa6f6d7714aa228b08 https://www.encodeproject.org/files/ENCFF869OFC/@@download/ENCFF869OFC.bigBed GRCh38 released control low read depth, missing genetic modification characterization, low read depth ENCFF734GUF bigBed narrowPeak peaks ENCSR603XLW ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF589-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF171ODU 12820232 ENCODE Processing Pipeline 12f51735370aadcb61f4fd8a591dabde https://www.encodeproject.org/files/ENCFF734GUF/@@download/ENCFF734GUF.bigBed GRCh38 released control low read depth, missing genetic modification characterization, low read depth ENCFF909KSV bed narrowPeak peaks ENCSR603XLW ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF589-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF284MLL, ENCFF604MCA 6290134 ENCODE Processing Pipeline 9b52420f678325d956c2e4b63e78fb88 https://www.encodeproject.org/files/ENCFF909KSV/@@download/ENCFF909KSV.bed.gz GRCh38 released control low read depth, missing genetic modification characterization, low read depth ENCFF044TCD bed narrowPeak conservative idr thresholded peaks ENCSR603XLW ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF589-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF143EAJ, ENCFF171ODU, ENCFF419RSJ, ENCFF909KSV 387129 ENCODE Processing Pipeline 12446ecdc909e56ad6099521bcbd0bdc https://www.encodeproject.org/files/ENCFF044TCD/@@download/ENCFF044TCD.bed.gz GRCh38 released control low read depth, missing genetic modification characterization, low read depth ENCFF575PQQ bigBed narrowPeak conservative idr thresholded peaks ENCSR603XLW ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF589-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF044TCD 978915 ENCODE Processing Pipeline ee67811b40a095838a3b81da77336057 https://www.encodeproject.org/files/ENCFF575PQQ/@@download/ENCFF575PQQ.bigBed GRCh38 released control low read depth, missing genetic modification characterization, low read depth ENCFF616YTV bigBed narrowPeak peaks ENCSR603XLW ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF589-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF909KSV 12697861 ENCODE Processing Pipeline de99bb2e3de7938dd026e6d8f8b48de0 https://www.encodeproject.org/files/ENCFF616YTV/@@download/ENCFF616YTV.bigBed GRCh38 released control low read depth, missing genetic modification characterization, low read depth ENCFF271NEP bed narrowPeak optimal idr thresholded peaks ENCSR603XLW ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF589-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF143EAJ, ENCFF171ODU, ENCFF419RSJ, ENCFF909KSV 389902 ENCODE Processing Pipeline 4ee33dbe140816bcee4908c36c73d3f5 https://www.encodeproject.org/files/ENCFF271NEP/@@download/ENCFF271NEP.bed.gz GRCh38 released control low read depth, missing genetic modification characterization, low read depth ENCFF818UQY bigBed narrowPeak optimal idr thresholded peaks ENCSR603XLW ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF589-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF271NEP 984982 ENCODE Processing Pipeline e8e853e9c938b241094bec21258e0fa3 https://www.encodeproject.org/files/ENCFF818UQY/@@download/ENCFF818UQY.bigBed GRCh38 released control low read depth, missing genetic modification characterization, low read depth ENCFF576LGB bigBed narrowPeak optimal idr thresholded peaks ENCSR603XLW ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF589-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF602AXP 615446 ENCODE Processing Pipeline 47426c5ffd7a49678fba432567a54c43 https://www.encodeproject.org/files/ENCFF576LGB/@@download/ENCFF576LGB.bigBed hg19 released control low read depth, missing genetic modification characterization, low read depth ENCFF038QAE bigBed narrowPeak conservative idr thresholded peaks ENCSR603XLW ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF589-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF433UZU 599047 ENCODE Processing Pipeline 636ba1616b10567788f12728ac9c822d https://www.encodeproject.org/files/ENCFF038QAE/@@download/ENCFF038QAE.bigBed hg19 released control low read depth, missing genetic modification characterization, low read depth ENCFF602AXP bed narrowPeak optimal idr thresholded peaks ENCSR603XLW ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF589-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF001TDO, ENCFF470XSK, ENCFF524YHM, ENCFF783GCE 328275 ENCODE Processing Pipeline ad7eca2f92009aa774a2f0e1cc3ca6df https://www.encodeproject.org/files/ENCFF602AXP/@@download/ENCFF602AXP.bed.gz hg19 released control low read depth, missing genetic modification characterization, low read depth ENCFF433UZU bed narrowPeak conservative idr thresholded peaks ENCSR603XLW ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF589-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF001TDO, ENCFF470XSK, ENCFF524YHM, ENCFF783GCE 316519 ENCODE Processing Pipeline cffa04741a1c81b1f1a153eff47d066b https://www.encodeproject.org/files/ENCFF433UZU/@@download/ENCFF433UZU.bed.gz hg19 released control low read depth, missing genetic modification characterization, low read depth ENCFF136VQP fastq reads ENCSR814AJH ChIP-seq EFO:0002067 K562 cell line Homo sapiens SRSF9-human ENCAB278ULX DNA SDS formaldehyde False 2017-12-01 ENCODE 1 1 40 single-ended 491056839 Xiang-Dong Fu, UCSD c3e267afb9c37e2fcc5efe879b02e5cc https://www.encodeproject.org/files/ENCFF136VQP/@@download/ENCFF136VQP.fastq.gz Illumina HiSeq 2000 /files/ENCFF911KYO/ released low read depth, low read length experiment not submitted to GEO missing control alignments ENCFF183BQH fastq reads ENCSR814AJH ChIP-seq EFO:0002067 K562 cell line Homo sapiens SRSF9-human ENCAB278ULX DNA SDS formaldehyde False 2017-12-01 ENCODE 2 1 40 single-ended 437525322 Xiang-Dong Fu, UCSD c89ab6b450715a54b23e8430a2d9563f https://www.encodeproject.org/files/ENCFF183BQH/@@download/ENCFF183BQH.fastq.gz Illumina HiSeq 2000 /files/ENCFF113ZAT/ released low read depth, low read length experiment not submitted to GEO missing control alignments ENCFF541GVQ bam alignments ENCSR814AJH ChIP-seq EFO:0002067 K562 cell line Homo sapiens SRSF9-human ENCAB278ULX DNA SDS formaldehyde False 2017-12-01 ENCODE 2 40 ENCFF183BQH, ENCFF807MUK 449089321 ENCODE Processing Pipeline b4b9a5f3f489abc3a5e1f44ccf138a43 https://www.encodeproject.org/files/ENCFF541GVQ/@@download/ENCFF541GVQ.bam hg19 released low read depth, low read length experiment not submitted to GEO missing control alignments ENCFF703DOA bam alignments ENCSR814AJH ChIP-seq EFO:0002067 K562 cell line Homo sapiens SRSF9-human ENCAB278ULX DNA SDS formaldehyde False 2017-12-01 ENCODE 1 40 ENCFF136VQP, ENCFF807MUK 512025706 ENCODE Processing Pipeline 69519343284f633ceac9ff3ba2077c6c https://www.encodeproject.org/files/ENCFF703DOA/@@download/ENCFF703DOA.bam hg19 released low read depth, low read length experiment not submitted to GEO missing control alignments ENCFF115LZU bigWig signal p-value ENCSR814AJH ChIP-seq EFO:0002067 K562 cell line Homo sapiens SRSF9-human ENCAB278ULX DNA SDS formaldehyde False 2017-12-01 ENCODE 1 ENCFF703DOA, ENCFF851QFR 538469283 ENCODE Processing Pipeline 933bc1949556bd8f5402a0e9557a637c https://www.encodeproject.org/files/ENCFF115LZU/@@download/ENCFF115LZU.bigWig hg19 released low read depth, low read length experiment not submitted to GEO missing control alignments ENCFF385JKY bigWig signal p-value ENCSR814AJH ChIP-seq EFO:0002067 K562 cell line Homo sapiens SRSF9-human ENCAB278ULX DNA SDS formaldehyde False 2017-12-01 ENCODE 1, 2 ENCFF541GVQ, ENCFF703DOA, ENCFF851QFR, ENCFF922JGL 956527340 ENCODE Processing Pipeline 70ff16f9cf4c6a3392893af70887bcbf https://www.encodeproject.org/files/ENCFF385JKY/@@download/ENCFF385JKY.bigWig hg19 released low read depth, low read length experiment not submitted to GEO missing control alignments ENCFF616MIL bigWig fold change over control ENCSR814AJH ChIP-seq EFO:0002067 K562 cell line Homo sapiens SRSF9-human ENCAB278ULX DNA SDS formaldehyde False 2017-12-01 ENCODE 1 ENCFF703DOA, ENCFF851QFR 356284965 ENCODE Processing Pipeline 7ce41afdcd2daede059315a5f232cffe https://www.encodeproject.org/files/ENCFF616MIL/@@download/ENCFF616MIL.bigWig hg19 released low read depth, low read length experiment not submitted to GEO missing control alignments ENCFF749ZPC bigWig signal p-value ENCSR814AJH ChIP-seq EFO:0002067 K562 cell line Homo sapiens SRSF9-human ENCAB278ULX DNA SDS formaldehyde False 2017-12-01 ENCODE 2 ENCFF541GVQ, ENCFF922JGL 535868622 ENCODE Processing Pipeline 725f918d38e458b1c036a8f30bcfcadf https://www.encodeproject.org/files/ENCFF749ZPC/@@download/ENCFF749ZPC.bigWig hg19 released low read depth, low read length experiment not submitted to GEO missing control alignments ENCFF474MKH bigWig fold change over control ENCSR814AJH ChIP-seq EFO:0002067 K562 cell line Homo sapiens SRSF9-human ENCAB278ULX DNA SDS formaldehyde False 2017-12-01 ENCODE 2 ENCFF541GVQ, ENCFF922JGL 308000380 ENCODE Processing Pipeline 5ff158b77ae78996c6e65007a976fca3 https://www.encodeproject.org/files/ENCFF474MKH/@@download/ENCFF474MKH.bigWig hg19 released low read depth, low read length experiment not submitted to GEO missing control alignments ENCFF547QRA bigBed narrowPeak peaks ENCSR814AJH ChIP-seq EFO:0002067 K562 cell line Homo sapiens SRSF9-human ENCAB278ULX DNA SDS formaldehyde False 2017-12-01 ENCODE 1 ENCFF222MCF 11057926 ENCODE Processing Pipeline 1a1eaf81e4ad0c7dfc40bbb8f3240d83 https://www.encodeproject.org/files/ENCFF547QRA/@@download/ENCFF547QRA.bigBed hg19 released low read depth, low read length experiment not submitted to GEO missing control alignments ENCFF169ZKI bed narrowPeak peaks ENCSR814AJH ChIP-seq EFO:0002067 K562 cell line Homo sapiens SRSF9-human ENCAB278ULX DNA SDS formaldehyde False 2017-12-01 ENCODE 2 ENCFF541GVQ, ENCFF922JGL 5154718 ENCODE Processing Pipeline 6a4f993445e20144e700970ada0ca6d1 https://www.encodeproject.org/files/ENCFF169ZKI/@@download/ENCFF169ZKI.bed.gz hg19 released low read depth, low read length experiment not submitted to GEO missing control alignments ENCFF598FYN bigBed narrowPeak peaks ENCSR814AJH ChIP-seq EFO:0002067 K562 cell line Homo sapiens SRSF9-human ENCAB278ULX DNA SDS formaldehyde False 2017-12-01 ENCODE 2 ENCFF169ZKI 11016826 ENCODE Processing Pipeline 45403d5cd14b5dc36044291d7947d0a9 https://www.encodeproject.org/files/ENCFF598FYN/@@download/ENCFF598FYN.bigBed hg19 released low read depth, low read length experiment not submitted to GEO missing control alignments ENCFF607NKZ bigBed narrowPeak peaks ENCSR814AJH ChIP-seq EFO:0002067 K562 cell line Homo sapiens SRSF9-human ENCAB278ULX DNA SDS formaldehyde False 2017-12-01 ENCODE 1, 2 ENCFF690XME 13430971 ENCODE Processing Pipeline 618ea83a76ba0b2439ff606146b39ad8 https://www.encodeproject.org/files/ENCFF607NKZ/@@download/ENCFF607NKZ.bigBed hg19 released low read depth, low read length experiment not submitted to GEO missing control alignments ENCFF878SUX bigWig fold change over control ENCSR814AJH ChIP-seq EFO:0002067 K562 cell line Homo sapiens SRSF9-human ENCAB278ULX DNA SDS formaldehyde False 2017-12-01 ENCODE 1, 2 ENCFF541GVQ, ENCFF703DOA, ENCFF851QFR, ENCFF922JGL 782698127 ENCODE Processing Pipeline 645e8c75904aeba6cb79f1a1c81e23d7 https://www.encodeproject.org/files/ENCFF878SUX/@@download/ENCFF878SUX.bigWig hg19 released low read depth, low read length experiment not submitted to GEO missing control alignments ENCFF690XME bed narrowPeak peaks ENCSR814AJH ChIP-seq EFO:0002067 K562 cell line Homo sapiens SRSF9-human ENCAB278ULX DNA SDS formaldehyde False 2017-12-01 ENCODE 1, 2 ENCFF541GVQ, ENCFF703DOA, ENCFF851QFR, ENCFF922JGL 6477087 ENCODE Processing Pipeline c4aa812bf5b1fb63a3dda7f8bca556b4 https://www.encodeproject.org/files/ENCFF690XME/@@download/ENCFF690XME.bed.gz hg19 released low read depth, low read length experiment not submitted to GEO missing control alignments ENCFF222MCF bed narrowPeak peaks ENCSR814AJH ChIP-seq EFO:0002067 K562 cell line Homo sapiens SRSF9-human ENCAB278ULX DNA SDS formaldehyde False 2017-12-01 ENCODE 1 ENCFF703DOA, ENCFF851QFR 5113942 ENCODE Processing Pipeline daa67ed21404762d9b3243f9edb73e63 https://www.encodeproject.org/files/ENCFF222MCF/@@download/ENCFF222MCF.bed.gz hg19 released low read depth, low read length experiment not submitted to GEO missing control alignments ENCFF616LSA bam unfiltered alignments ENCSR814AJH ChIP-seq EFO:0002067 K562 cell line Homo sapiens SRSF9-human ENCAB278ULX DNA SDS formaldehyde False 2017-12-01 ENCODE 2 ENCFF183BQH, ENCFF643CGH 632192747 ENCODE Processing Pipeline 4c391849ae5878690ab9f800e44e9db5 https://www.encodeproject.org/files/ENCFF616LSA/@@download/ENCFF616LSA.bam GRCh38 released low read depth, low read length experiment not submitted to GEO missing control alignments ENCFF375PAX bam unfiltered alignments ENCSR814AJH ChIP-seq EFO:0002067 K562 cell line Homo sapiens SRSF9-human ENCAB278ULX DNA SDS formaldehyde False 2017-12-01 ENCODE 1 ENCFF136VQP, ENCFF643CGH 711901715 ENCODE Processing Pipeline 0eacca0f0d0ff98b99717f697dad5fe0 https://www.encodeproject.org/files/ENCFF375PAX/@@download/ENCFF375PAX.bam GRCh38 released low read depth, low read length experiment not submitted to GEO missing control alignments ENCFF787ONF bam alignments ENCSR814AJH ChIP-seq EFO:0002067 K562 cell line Homo sapiens SRSF9-human ENCAB278ULX DNA SDS formaldehyde False 2017-12-01 ENCODE 2 40 ENCFF183BQH, ENCFF643CGH 448713954 ENCODE Processing Pipeline 05fc97a60e52d05a3f5b706bd2b4474e https://www.encodeproject.org/files/ENCFF787ONF/@@download/ENCFF787ONF.bam GRCh38 released low read depth, low read length experiment not submitted to GEO missing control alignments ENCFF228GPF bam alignments ENCSR814AJH ChIP-seq EFO:0002067 K562 cell line Homo sapiens SRSF9-human ENCAB278ULX DNA SDS formaldehyde False 2017-12-01 ENCODE 1 40 ENCFF136VQP, ENCFF643CGH 511628537 ENCODE Processing Pipeline 03bab60039a1bb85a101987960cf8a95 https://www.encodeproject.org/files/ENCFF228GPF/@@download/ENCFF228GPF.bam GRCh38 released low read depth, low read length experiment not submitted to GEO missing control alignments ENCFF843QJU bigWig signal p-value ENCSR814AJH ChIP-seq EFO:0002067 K562 cell line Homo sapiens SRSF9-human ENCAB278ULX DNA SDS formaldehyde False 2017-12-01 ENCODE 2 ENCFF787ONF 477347944 ENCODE Processing Pipeline c32e0981c7c970e796e1b097f0f628b6 https://www.encodeproject.org/files/ENCFF843QJU/@@download/ENCFF843QJU.bigWig GRCh38 released low read depth, low read length experiment not submitted to GEO missing control alignments ENCFF330HXG bigWig signal p-value ENCSR814AJH ChIP-seq EFO:0002067 K562 cell line Homo sapiens SRSF9-human ENCAB278ULX DNA SDS formaldehyde False 2017-12-01 ENCODE 1, 2 ENCFF228GPF, ENCFF787ONF 920750229 ENCODE Processing Pipeline 946af342a56596efe50db93a147a7983 https://www.encodeproject.org/files/ENCFF330HXG/@@download/ENCFF330HXG.bigWig GRCh38 released low read depth, low read length experiment not submitted to GEO missing control alignments ENCFF668URC bigWig signal p-value ENCSR814AJH ChIP-seq EFO:0002067 K562 cell line Homo sapiens SRSF9-human ENCAB278ULX DNA SDS formaldehyde False 2017-12-01 ENCODE 1 ENCFF228GPF 470377393 ENCODE Processing Pipeline 91773bfdd4b004437598531b2585e57f https://www.encodeproject.org/files/ENCFF668URC/@@download/ENCFF668URC.bigWig GRCh38 released low read depth, low read length experiment not submitted to GEO missing control alignments ENCFF491MXT bigWig fold change over control ENCSR814AJH ChIP-seq EFO:0002067 K562 cell line Homo sapiens SRSF9-human ENCAB278ULX DNA SDS formaldehyde False 2017-12-01 ENCODE 2 ENCFF787ONF 309162477 ENCODE Processing Pipeline 3a5ddcf7d0601c4a3f99f8ad89fd5b45 https://www.encodeproject.org/files/ENCFF491MXT/@@download/ENCFF491MXT.bigWig GRCh38 released low read depth, low read length experiment not submitted to GEO missing control alignments ENCFF188YSK bigWig fold change over control ENCSR814AJH ChIP-seq EFO:0002067 K562 cell line Homo sapiens SRSF9-human ENCAB278ULX DNA SDS formaldehyde False 2017-12-01 ENCODE 1 ENCFF228GPF 343802659 ENCODE Processing Pipeline 03fd7e06ca1fc529fbba1b6863a20459 https://www.encodeproject.org/files/ENCFF188YSK/@@download/ENCFF188YSK.bigWig GRCh38 released low read depth, low read length experiment not submitted to GEO missing control alignments ENCFF622FMX bigWig fold change over control ENCSR814AJH ChIP-seq EFO:0002067 K562 cell line Homo sapiens SRSF9-human ENCAB278ULX DNA SDS formaldehyde False 2017-12-01 ENCODE 1, 2 ENCFF228GPF, ENCFF787ONF 767981784 ENCODE Processing Pipeline 3f3c60a6e6419bc33f5bab4c0e5c12ac https://www.encodeproject.org/files/ENCFF622FMX/@@download/ENCFF622FMX.bigWig GRCh38 released low read depth, low read length experiment not submitted to GEO missing control alignments ENCFF726NAA bed narrowPeak peaks ENCSR814AJH ChIP-seq EFO:0002067 K562 cell line Homo sapiens SRSF9-human ENCAB278ULX DNA SDS formaldehyde False 2017-12-01 ENCODE 2 ENCFF787ONF 4584933 ENCODE Processing Pipeline 8bef1eaf746cda3b9342333873eace5d https://www.encodeproject.org/files/ENCFF726NAA/@@download/ENCFF726NAA.bed.gz GRCh38 released low read depth, low read length experiment not submitted to GEO missing control alignments ENCFF728TXA bed narrowPeak peaks ENCSR814AJH ChIP-seq EFO:0002067 K562 cell line Homo sapiens SRSF9-human ENCAB278ULX DNA SDS formaldehyde False 2017-12-01 ENCODE 1, 2 ENCFF228GPF, ENCFF787ONF 6116005 ENCODE Processing Pipeline b5079295d12dbf384cea987e322f9bb7 https://www.encodeproject.org/files/ENCFF728TXA/@@download/ENCFF728TXA.bed.gz GRCh38 released low read depth, low read length experiment not submitted to GEO missing control alignments ENCFF156ISN bed narrowPeak peaks ENCSR814AJH ChIP-seq EFO:0002067 K562 cell line Homo sapiens SRSF9-human ENCAB278ULX DNA SDS formaldehyde False 2017-12-01 ENCODE 1 ENCFF228GPF 4799438 ENCODE Processing Pipeline e5ea60285d02f5c64dfd0a94a77763a0 https://www.encodeproject.org/files/ENCFF156ISN/@@download/ENCFF156ISN.bed.gz GRCh38 released low read depth, low read length experiment not submitted to GEO missing control alignments ENCFF538KLG bigBed narrowPeak peaks ENCSR814AJH ChIP-seq EFO:0002067 K562 cell line Homo sapiens SRSF9-human ENCAB278ULX DNA SDS formaldehyde False 2017-12-01 ENCODE 1 ENCFF156ISN 10982832 ENCODE Processing Pipeline a225095a12074bbdf373fd22c23b5083 https://www.encodeproject.org/files/ENCFF538KLG/@@download/ENCFF538KLG.bigBed GRCh38 released low read depth, low read length experiment not submitted to GEO missing control alignments ENCFF214VKN bigBed narrowPeak peaks ENCSR814AJH ChIP-seq EFO:0002067 K562 cell line Homo sapiens SRSF9-human ENCAB278ULX DNA SDS formaldehyde False 2017-12-01 ENCODE 2 ENCFF726NAA 10840846 ENCODE Processing Pipeline 01479cbf6dbdddd7c8e771c5cb28d36c https://www.encodeproject.org/files/ENCFF214VKN/@@download/ENCFF214VKN.bigBed GRCh38 released low read depth, low read length experiment not submitted to GEO missing control alignments ENCFF701IGN bigBed narrowPeak peaks ENCSR814AJH ChIP-seq EFO:0002067 K562 cell line Homo sapiens SRSF9-human ENCAB278ULX DNA SDS formaldehyde False 2017-12-01 ENCODE 1, 2 ENCFF728TXA 11295360 ENCODE Processing Pipeline b2faa79d2bc88eb516d0f5af798761cb https://www.encodeproject.org/files/ENCFF701IGN/@@download/ENCFF701IGN.bigBed GRCh38 released low read depth, low read length experiment not submitted to GEO missing control alignments ENCFF783LYO bigBed narrowPeak optimal idr thresholded peaks ENCSR814AJH ChIP-seq EFO:0002067 K562 cell line Homo sapiens SRSF9-human ENCAB278ULX DNA SDS formaldehyde False 2017-12-01 ENCODE 1, 2 ENCFF217HAW 34970 ENCODE Processing Pipeline a9bd3c08d5d1a86e6b9b3fd04be37079 https://www.encodeproject.org/files/ENCFF783LYO/@@download/ENCFF783LYO.bigBed GRCh38 released low read depth, low read length experiment not submitted to GEO missing control alignments ENCFF217HAW bed narrowPeak optimal idr thresholded peaks ENCSR814AJH ChIP-seq EFO:0002067 K562 cell line Homo sapiens SRSF9-human ENCAB278ULX DNA SDS formaldehyde False 2017-12-01 ENCODE 1, 2 ENCFF156ISN, ENCFF419RSJ, ENCFF726NAA, ENCFF728TXA 647 ENCODE Processing Pipeline ab86c3dadb50c09aed10410be667f6e8 https://www.encodeproject.org/files/ENCFF217HAW/@@download/ENCFF217HAW.bed.gz GRCh38 released low read depth, low read length experiment not submitted to GEO missing control alignments ENCFF265WRU bigBed narrowPeak conservative idr thresholded peaks ENCSR814AJH ChIP-seq EFO:0002067 K562 cell line Homo sapiens SRSF9-human ENCAB278ULX DNA SDS formaldehyde False 2017-12-01 ENCODE 1, 2 ENCFF500ZGP 15121 ENCODE Processing Pipeline aac04ab47606f4ab11f66b8da5e0e194 https://www.encodeproject.org/files/ENCFF265WRU/@@download/ENCFF265WRU.bigBed hg19 released low read depth, low read length experiment not submitted to GEO missing control alignments ENCFF138MXI bigBed narrowPeak optimal idr thresholded peaks ENCSR814AJH ChIP-seq EFO:0002067 K562 cell line Homo sapiens SRSF9-human ENCAB278ULX DNA SDS formaldehyde False 2017-12-01 ENCODE 1, 2 ENCFF137IBM 15113 ENCODE Processing Pipeline 2570a908b2e3892ff558aec8d32d391a https://www.encodeproject.org/files/ENCFF138MXI/@@download/ENCFF138MXI.bigBed hg19 released low read depth, low read length experiment not submitted to GEO missing control alignments ENCFF500ZGP bed narrowPeak conservative idr thresholded peaks ENCSR814AJH ChIP-seq EFO:0002067 K562 cell line Homo sapiens SRSF9-human ENCAB278ULX DNA SDS formaldehyde False 2017-12-01 ENCODE 1, 2 ENCFF001TDO, ENCFF169ZKI, ENCFF222MCF, ENCFF690XME 532 ENCODE Processing Pipeline 381dcf2222849ee7affb9198706a007c https://www.encodeproject.org/files/ENCFF500ZGP/@@download/ENCFF500ZGP.bed.gz hg19 released low read depth, low read length experiment not submitted to GEO missing control alignments ENCFF137IBM bed narrowPeak optimal idr thresholded peaks ENCSR814AJH ChIP-seq EFO:0002067 K562 cell line Homo sapiens SRSF9-human ENCAB278ULX DNA SDS formaldehyde False 2017-12-01 ENCODE 1, 2 ENCFF001TDO, ENCFF169ZKI, ENCFF222MCF, ENCFF690XME 533 ENCODE Processing Pipeline 3da69747c2c7e765084cfddb90f40a51 https://www.encodeproject.org/files/ENCFF137IBM/@@download/ENCFF137IBM.bed.gz hg19 released low read depth, low read length experiment not submitted to GEO missing control alignments ENCFF551CHL bam unfiltered alignments ENCSR814AJH ChIP-seq EFO:0002067 K562 cell line Homo sapiens SRSF9-human ENCAB278ULX DNA SDS formaldehyde False 2017-12-01 ENCODE 1 40 ENCFF136VQP, ENCFF807MUK 708450985 ENCODE Processing Pipeline e67a370dfb6b1708a4e13fd38d0f1ec7 https://www.encodeproject.org/files/ENCFF551CHL/@@download/ENCFF551CHL.bam hg19 released low read depth, low read length experiment not submitted to GEO missing control alignments ENCFF533TTC bam unfiltered alignments ENCSR814AJH ChIP-seq EFO:0002067 K562 cell line Homo sapiens SRSF9-human ENCAB278ULX DNA SDS formaldehyde False 2017-12-01 ENCODE 2 40 ENCFF183BQH, ENCFF807MUK 629270532 ENCODE Processing Pipeline af923b09cd3aff66b7c0b45ca43655ed https://www.encodeproject.org/files/ENCFF533TTC/@@download/ENCFF533TTC.bam hg19 released low read depth, low read length experiment not submitted to GEO missing control alignments ENCFF000YTZ bam alignments ENCSR000EGZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MXI1-human ENCAB000AIT DNA see document see document False 2011-10-29 ENCODE 2 ENCFF000YUJ 419308103 Michael Snyder, Stanford b034e58837f9eb8663aae2cd22c25383 https://www.encodeproject.org/files/ENCFF000YTZ/@@download/ENCFF000YTZ.bam hg19 archived low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF000YUA bam alignments ENCSR000EGZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MXI1-human ENCAB000AIT DNA see document see document False 2011-10-29 ENCODE 1 ENCFF000YUK 448131451 Michael Snyder, Stanford 3a70092886cc1fe9694837399e33c540 https://www.encodeproject.org/files/ENCFF000YUA/@@download/ENCFF000YUA.bam hg19 archived low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF000YUB bigBed narrowPeak peaks ENCSR000EGZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MXI1-human ENCAB000AIT DNA see document see document False 2011-10-29 ENCODE ENCFF001VNV 1525994 Michael Snyder, Stanford 0b171cee7dd5fb087391f0dbf39c776e https://www.encodeproject.org/files/ENCFF000YUB/@@download/ENCFF000YUB.bigBed hg19 archived low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF000YUD bigWig signal ENCSR000EGZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MXI1-human ENCAB000AIT DNA see document see document False 2011-10-29 ENCODE 309914304 Michael Snyder, Stanford f2cad733a0e1eb42ffb87ed0194f76f9 https://www.encodeproject.org/files/ENCFF000YUD/@@download/ENCFF000YUD.bigWig hg19 archived low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample, missing derived_from ENCFF000YUJ fastq reads ENCSR000EGZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MXI1-human ENCAB000AIT DNA see document see document False 2011-10-29 ENCODE 2 1 36 single-ended 891715835 Michael Snyder, Stanford 832fd5a4cc0780cd76db0b3c1ba0e99a https://www.encodeproject.org/files/ENCFF000YUJ/@@download/ENCFF000YUJ.fastq.gz Illumina Genome Analyzer /files/ENCFF000YRB/ released low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF000YUK fastq reads ENCSR000EGZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MXI1-human ENCAB000AIT DNA see document see document False 2011-10-29 ENCODE 1 1 36 single-ended 911134596 Michael Snyder, Stanford 7562507902e9ffb3eb773c9726c64412 https://www.encodeproject.org/files/ENCFF000YUK/@@download/ENCFF000YUK.fastq.gz Illumina Genome Analyzer /files/ENCFF000YRB/ released low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF001VNV bed narrowPeak peaks ENCSR000EGZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MXI1-human ENCAB000AIT DNA see document see document False 2011-10-29 ENCODE 551098 Michael Snyder, Stanford 47edb8c708aa3e49b94b4b5aae4db4e7 https://www.encodeproject.org/files/ENCFF001VNV/@@download/ENCFF001VNV.bed.gz hg19 archived low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample, missing derived_from ENCFF002CXF bed narrowPeak optimal idr thresholded peaks ENCSR000EGZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MXI1-human ENCAB000AIT DNA see document see document False 2011-10-29 ENCODE 167844 ENCODE Consortium Analysis Working Group ad39164396d52a0f2553d28532d80f58 https://www.encodeproject.org/files/ENCFF002CXF/@@download/ENCFF002CXF.bed.gz hg19 archived low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample, missing derived_from ENCFF649DXH bigBed narrowPeak optimal idr thresholded peaks ENCSR000EGZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MXI1-human ENCAB000AIT DNA see document see document False 2011-10-29 ENCODE ENCFF002CXF 446050 ENCODE Consortium 782b18e233935fe17f99ee6fc1b6fe94 https://www.encodeproject.org/files/ENCFF649DXH/@@download/ENCFF649DXH.bigBed hg19 archived low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF260VIR bam unfiltered alignments ENCSR000EGZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MXI1-human ENCAB000AIT DNA see document see document False 2011-10-29 ENCODE 2 36 ENCFF000YUJ, ENCFF643CGH 1064490774 ENCODE Processing Pipeline 5cff3f215744e350ac073ea6fdcbb0f2 https://www.encodeproject.org/files/ENCFF260VIR/@@download/ENCFF260VIR.bam GRCh38 released low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF726UVN bam alignments ENCSR000EGZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MXI1-human ENCAB000AIT DNA see document see document False 2011-10-29 ENCODE 2 36 ENCFF000YUJ, ENCFF643CGH 638436900 ENCODE Processing Pipeline f51fd5cc0da310594840dc873e12145e https://www.encodeproject.org/files/ENCFF726UVN/@@download/ENCFF726UVN.bam GRCh38 released low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF322OYY bam unfiltered alignments ENCSR000EGZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MXI1-human ENCAB000AIT DNA see document see document False 2011-10-29 ENCODE 1 36 ENCFF000YUK, ENCFF643CGH 1118580690 ENCODE Processing Pipeline 53ce5bd760493e6fae0728ac1fd8a59a https://www.encodeproject.org/files/ENCFF322OYY/@@download/ENCFF322OYY.bam GRCh38 released low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF388QNA bam alignments ENCSR000EGZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MXI1-human ENCAB000AIT DNA see document see document False 2011-10-29 ENCODE 1 36 ENCFF000YUK, ENCFF643CGH 719748956 ENCODE Processing Pipeline 69af2d10c943203020cf5e5c401fc963 https://www.encodeproject.org/files/ENCFF388QNA/@@download/ENCFF388QNA.bam GRCh38 released low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF009RJG bam unfiltered alignments ENCSR000EGZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MXI1-human ENCAB000AIT DNA see document see document False 2011-10-29 ENCODE 1 36 ENCFF000YUK, ENCFF807MUK 1112869309 ENCODE Processing Pipeline 6ba67422cd7117d97a5b45f85476369b https://www.encodeproject.org/files/ENCFF009RJG/@@download/ENCFF009RJG.bam hg19 released low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF946QFA bam unfiltered alignments ENCSR000EGZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MXI1-human ENCAB000AIT DNA see document see document False 2011-10-29 ENCODE 2 36 ENCFF000YUJ, ENCFF807MUK 1059625134 ENCODE Processing Pipeline 7eaa49ca96df4d25b0c60cc542b52e5d https://www.encodeproject.org/files/ENCFF946QFA/@@download/ENCFF946QFA.bam hg19 released low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF094XLP bam alignments ENCSR000EGZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MXI1-human ENCAB000AIT DNA see document see document False 2011-10-29 ENCODE 2 36 ENCFF000YUJ, ENCFF807MUK 638865506 ENCODE Processing Pipeline 8ca71bfb977d134f7f990af016b99212 https://www.encodeproject.org/files/ENCFF094XLP/@@download/ENCFF094XLP.bam hg19 released low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF976PFK bam alignments ENCSR000EGZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MXI1-human ENCAB000AIT DNA see document see document False 2011-10-29 ENCODE 1 36 ENCFF000YUK, ENCFF807MUK 720157305 ENCODE Processing Pipeline 888bffe649a940164ffdd258f037d7c4 https://www.encodeproject.org/files/ENCFF976PFK/@@download/ENCFF976PFK.bam hg19 released low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF066HKT bigWig signal p-value ENCSR000EGZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MXI1-human ENCAB000AIT DNA see document see document False 2011-10-29 ENCODE 1 ENCFF023NGN, ENCFF388QNA 524800621 ENCODE Processing Pipeline 02065f4135c4001b6a3c8e55746b0607 https://www.encodeproject.org/files/ENCFF066HKT/@@download/ENCFF066HKT.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF408JMA bigWig signal p-value ENCSR000EGZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MXI1-human ENCAB000AIT DNA see document see document False 2011-10-29 ENCODE 2 ENCFF023NGN, ENCFF726UVN 404850893 ENCODE Processing Pipeline da74dcb38d9000a92fa5c3de1cfd4c49 https://www.encodeproject.org/files/ENCFF408JMA/@@download/ENCFF408JMA.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF520AFF bigWig signal p-value ENCSR000EGZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MXI1-human ENCAB000AIT DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF023NGN, ENCFF388QNA, ENCFF726UVN 543671906 ENCODE Processing Pipeline 9886e7df7a3028049b1a86d873ebd042 https://www.encodeproject.org/files/ENCFF520AFF/@@download/ENCFF520AFF.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF377NUR bigWig fold change over control ENCSR000EGZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MXI1-human ENCAB000AIT DNA see document see document False 2011-10-29 ENCODE 2 ENCFF023NGN, ENCFF726UVN 356903309 ENCODE Processing Pipeline a2c9161ff93efb967e2a5c4ee2c178ac https://www.encodeproject.org/files/ENCFF377NUR/@@download/ENCFF377NUR.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF507OLB bigWig fold change over control ENCSR000EGZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MXI1-human ENCAB000AIT DNA see document see document False 2011-10-29 ENCODE 1 ENCFF023NGN, ENCFF388QNA 380918773 ENCODE Processing Pipeline b1457da4919bc3e106fd4576ac6fc7b1 https://www.encodeproject.org/files/ENCFF507OLB/@@download/ENCFF507OLB.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF084EQL bigBed narrowPeak peaks ENCSR000EGZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MXI1-human ENCAB000AIT DNA see document see document False 2011-10-29 ENCODE 1 ENCFF332OJQ 10820479 ENCODE Processing Pipeline 2b8b99c3bfdfb7eabd0b52cd44d5f4c8 https://www.encodeproject.org/files/ENCFF084EQL/@@download/ENCFF084EQL.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF918DNW bigWig fold change over control ENCSR000EGZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MXI1-human ENCAB000AIT DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF023NGN, ENCFF388QNA, ENCFF726UVN 618936748 ENCODE Processing Pipeline ac504b0b848478490ea02890b5b5f309 https://www.encodeproject.org/files/ENCFF918DNW/@@download/ENCFF918DNW.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF332OJQ bed narrowPeak peaks ENCSR000EGZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MXI1-human ENCAB000AIT DNA see document see document False 2011-10-29 ENCODE 1 ENCFF023NGN, ENCFF388QNA 4540403 ENCODE Processing Pipeline 5ed7d4caa3ebe1bd929c3fe6188b94d7 https://www.encodeproject.org/files/ENCFF332OJQ/@@download/ENCFF332OJQ.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF995LKI bed narrowPeak peaks ENCSR000EGZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MXI1-human ENCAB000AIT DNA see document see document False 2011-10-29 ENCODE 2 ENCFF023NGN, ENCFF726UVN 4372633 ENCODE Processing Pipeline 278c0604af419ebf0e405ac98cbcb14a https://www.encodeproject.org/files/ENCFF995LKI/@@download/ENCFF995LKI.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF335WQW bigBed narrowPeak peaks ENCSR000EGZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MXI1-human ENCAB000AIT DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF677CNS 11244631 ENCODE Processing Pipeline 48c421b0c837ff52381253fbb633b7a4 https://www.encodeproject.org/files/ENCFF335WQW/@@download/ENCFF335WQW.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF677CNS bed narrowPeak peaks ENCSR000EGZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MXI1-human ENCAB000AIT DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF023NGN, ENCFF388QNA, ENCFF726UVN 5350178 ENCODE Processing Pipeline 1cb8ce590f11480818c7e1bb1647442a https://www.encodeproject.org/files/ENCFF677CNS/@@download/ENCFF677CNS.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF118HMK bigBed narrowPeak peaks ENCSR000EGZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MXI1-human ENCAB000AIT DNA see document see document False 2011-10-29 ENCODE 2 ENCFF995LKI 10637774 ENCODE Processing Pipeline d0ce92d097e37d4fa6755d70aa10bd72 https://www.encodeproject.org/files/ENCFF118HMK/@@download/ENCFF118HMK.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF457COE bed narrowPeak conservative idr thresholded peaks ENCSR000EGZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MXI1-human ENCAB000AIT DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF332OJQ, ENCFF419RSJ, ENCFF677CNS, ENCFF995LKI 155026 ENCODE Processing Pipeline 2248e533b5649bdaec1288dd8d001e48 https://www.encodeproject.org/files/ENCFF457COE/@@download/ENCFF457COE.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF527CRX bigBed narrowPeak conservative idr thresholded peaks ENCSR000EGZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MXI1-human ENCAB000AIT DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF457COE 329623 ENCODE Processing Pipeline 1d6b2e246db2c6283c5922e87458d00c https://www.encodeproject.org/files/ENCFF527CRX/@@download/ENCFF527CRX.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF243QTL bed narrowPeak optimal idr thresholded peaks ENCSR000EGZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MXI1-human ENCAB000AIT DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF332OJQ, ENCFF419RSJ, ENCFF677CNS, ENCFF995LKI 161340 ENCODE Processing Pipeline ef2162b321cb4db6098cbf3f2a634995 https://www.encodeproject.org/files/ENCFF243QTL/@@download/ENCFF243QTL.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF669HFZ bigBed narrowPeak optimal idr thresholded peaks ENCSR000EGZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MXI1-human ENCAB000AIT DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF243QTL 338731 ENCODE Processing Pipeline c75e934b435ca07f5803d7bb3972724b https://www.encodeproject.org/files/ENCFF669HFZ/@@download/ENCFF669HFZ.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF393MQL bigWig signal p-value ENCSR000EGZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MXI1-human ENCAB000AIT DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF094XLP, ENCFF710NTS, ENCFF976PFK 582394456 ENCODE Processing Pipeline d1e62158ab0744ee0e9d514f00ec8149 https://www.encodeproject.org/files/ENCFF393MQL/@@download/ENCFF393MQL.bigWig hg19 released low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF069DOD bigWig fold change over control ENCSR000EGZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MXI1-human ENCAB000AIT DNA see document see document False 2011-10-29 ENCODE 2 ENCFF094XLP, ENCFF710NTS 357901509 ENCODE Processing Pipeline 16357194e4be5bb4c3f6068b11b4df6e https://www.encodeproject.org/files/ENCFF069DOD/@@download/ENCFF069DOD.bigWig hg19 released low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF120GUN bigWig fold change over control ENCSR000EGZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MXI1-human ENCAB000AIT DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF094XLP, ENCFF710NTS, ENCFF976PFK 623583850 ENCODE Processing Pipeline 1fb37caa15532e8d07714e52cb2bee46 https://www.encodeproject.org/files/ENCFF120GUN/@@download/ENCFF120GUN.bigWig hg19 released low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF794QMW bigWig signal p-value ENCSR000EGZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MXI1-human ENCAB000AIT DNA see document see document False 2011-10-29 ENCODE 2 ENCFF094XLP, ENCFF710NTS 415048204 ENCODE Processing Pipeline b98828809911f479f84bbf285d8325ea https://www.encodeproject.org/files/ENCFF794QMW/@@download/ENCFF794QMW.bigWig hg19 released low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF492QMD bed narrowPeak peaks ENCSR000EGZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MXI1-human ENCAB000AIT DNA see document see document False 2011-10-29 ENCODE 1 ENCFF710NTS, ENCFF976PFK 4545903 ENCODE Processing Pipeline 0a0487aed9dc6fe659d246aa985ef4f2 https://www.encodeproject.org/files/ENCFF492QMD/@@download/ENCFF492QMD.bed.gz hg19 released low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF459GCR bigWig signal p-value ENCSR000EGZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MXI1-human ENCAB000AIT DNA see document see document False 2011-10-29 ENCODE 1 ENCFF710NTS, ENCFF976PFK 473634881 ENCODE Processing Pipeline 94f72579e5c4271e8b05c64a38cd2e30 https://www.encodeproject.org/files/ENCFF459GCR/@@download/ENCFF459GCR.bigWig hg19 released low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF408TRC bed narrowPeak peaks ENCSR000EGZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MXI1-human ENCAB000AIT DNA see document see document False 2011-10-29 ENCODE 2 ENCFF094XLP, ENCFF710NTS 4419284 ENCODE Processing Pipeline 5feca8703d12480c372660f58565d18a https://www.encodeproject.org/files/ENCFF408TRC/@@download/ENCFF408TRC.bed.gz hg19 released low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF628ZYM bigBed narrowPeak conservative idr thresholded peaks ENCSR000EGZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MXI1-human ENCAB000AIT DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF413YYC 329461 ENCODE Processing Pipeline 706aed3b00d5bf909ab251a502808ba6 https://www.encodeproject.org/files/ENCFF628ZYM/@@download/ENCFF628ZYM.bigBed hg19 released low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF379LKU bigBed narrowPeak peaks ENCSR000EGZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MXI1-human ENCAB000AIT DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF400DMX 11243548 ENCODE Processing Pipeline 72c830912d16ffd01d1621bd0ab5e878 https://www.encodeproject.org/files/ENCFF379LKU/@@download/ENCFF379LKU.bigBed hg19 released low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF413YYC bed narrowPeak conservative idr thresholded peaks ENCSR000EGZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MXI1-human ENCAB000AIT DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF001TDO, ENCFF400DMX, ENCFF408TRC, ENCFF492QMD 155800 ENCODE Processing Pipeline ed1b020541477c5e0885a38e35074cbd https://www.encodeproject.org/files/ENCFF413YYC/@@download/ENCFF413YYC.bed.gz hg19 released low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF041UPE bigBed narrowPeak peaks ENCSR000EGZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MXI1-human ENCAB000AIT DNA see document see document False 2011-10-29 ENCODE 1 ENCFF492QMD 10816968 ENCODE Processing Pipeline 3c4be7e7a11071c0609f6e9c72723901 https://www.encodeproject.org/files/ENCFF041UPE/@@download/ENCFF041UPE.bigBed hg19 released low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF969KDM bigBed narrowPeak peaks ENCSR000EGZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MXI1-human ENCAB000AIT DNA see document see document False 2011-10-29 ENCODE 2 ENCFF408TRC 10662555 ENCODE Processing Pipeline 834da580efee76268f51a2a989ce2a01 https://www.encodeproject.org/files/ENCFF969KDM/@@download/ENCFF969KDM.bigBed hg19 released low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF829QNU bigBed narrowPeak optimal idr thresholded peaks ENCSR000EGZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MXI1-human ENCAB000AIT DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF970LCB 339357 ENCODE Processing Pipeline e7d156c78418f7154ce258827cd17477 https://www.encodeproject.org/files/ENCFF829QNU/@@download/ENCFF829QNU.bigBed hg19 released low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF557DJU bigWig fold change over control ENCSR000EGZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MXI1-human ENCAB000AIT DNA see document see document False 2011-10-29 ENCODE 1 ENCFF710NTS, ENCFF976PFK 381754635 ENCODE Processing Pipeline f87114f12af307199c4269a0f8ef858c https://www.encodeproject.org/files/ENCFF557DJU/@@download/ENCFF557DJU.bigWig hg19 released low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF970LCB bed narrowPeak optimal idr thresholded peaks ENCSR000EGZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MXI1-human ENCAB000AIT DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF001TDO, ENCFF400DMX, ENCFF408TRC, ENCFF492QMD 161913 ENCODE Processing Pipeline 5fde622a545fc7d9f4edabddd920274c https://www.encodeproject.org/files/ENCFF970LCB/@@download/ENCFF970LCB.bed.gz hg19 released low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF400DMX bed narrowPeak peaks ENCSR000EGZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MXI1-human ENCAB000AIT DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF094XLP, ENCFF710NTS, ENCFF976PFK 5355130 ENCODE Processing Pipeline 067c093be2af67e05fa64addf5f7ee7b https://www.encodeproject.org/files/ENCFF400DMX/@@download/ENCFF400DMX.bed.gz hg19 released low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF672AOW fastq reads ENCSR360HRA ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM1A-human ENCAB006QDW DNA False 2016-10-31 ENCODE 2 1 100 paired-ended 2 ENCFF401OZY 3312602558 Michael Snyder, Stanford b92b30e1cce4d155363ede7bf396ea15 SRA:SRR5111481 https://www.encodeproject.org/files/ENCFF672AOW/@@download/ENCFF672AOW.fastq.gz Illumina HiSeq 4000 /files/ENCFF837MIV/ released mild to moderate bottlenecking ENCFF401OZY fastq reads ENCSR360HRA ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM1A-human ENCAB006QDW DNA False 2016-10-31 ENCODE 2 1 100 paired-ended 1 ENCFF672AOW 3015829725 Michael Snyder, Stanford 8993b1e8ac032bc41e4dbd6202f7b4ba SRA:SRR5111481 https://www.encodeproject.org/files/ENCFF401OZY/@@download/ENCFF401OZY.fastq.gz Illumina HiSeq 4000 /files/ENCFF259GQA/ released mild to moderate bottlenecking ENCFF990RFH fastq reads ENCSR360HRA ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM1A-human ENCAB006QDW DNA False 2016-10-31 ENCODE 1 1 100 paired-ended 1 ENCFF841YFZ 3289695911 Michael Snyder, Stanford 7daaa0b1ec95df144715d5cd491b0193 https://www.encodeproject.org/files/ENCFF990RFH/@@download/ENCFF990RFH.fastq.gz Illumina HiSeq 4000 /files/ENCFF498JMO/ archived mild to moderate bottlenecking ENCFF841YFZ fastq reads ENCSR360HRA ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM1A-human ENCAB006QDW DNA False 2016-10-31 ENCODE 1 1 100 paired-ended 2 ENCFF990RFH 3546946340 Michael Snyder, Stanford 8a3d796a255dc7a09f958a10f5c8b9d8 https://www.encodeproject.org/files/ENCFF841YFZ/@@download/ENCFF841YFZ.fastq.gz Illumina HiSeq 4000 /files/ENCFF502GTS/ archived mild to moderate bottlenecking ENCFF761NME fastq reads ENCSR360HRA ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM1A-human ENCAB006QDW DNA False 2016-10-31 ENCODE 1 1 100 paired-ended 1 ENCFF468WZY 4603423709 Michael Snyder, Stanford 2f9eb4990be42ee364cf735bdc688aad SRA:SRR5111482 https://www.encodeproject.org/files/ENCFF761NME/@@download/ENCFF761NME.fastq.gz Illumina HiSeq 4000 /files/ENCFF498JMO/ released mild to moderate bottlenecking ENCFF468WZY fastq reads ENCSR360HRA ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM1A-human ENCAB006QDW DNA False 2016-10-31 ENCODE 1 1 100 paired-ended 2 ENCFF761NME 5059262692 Michael Snyder, Stanford 257c367cd19e0972dce59db03d79e629 SRA:SRR5111482 https://www.encodeproject.org/files/ENCFF468WZY/@@download/ENCFF468WZY.fastq.gz Illumina HiSeq 4000 /files/ENCFF502GTS/ released mild to moderate bottlenecking ENCFF636WSC bam unfiltered alignments ENCSR360HRA ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM1A-human ENCAB006QDW DNA False 2016-10-31 ENCODE 2 100 ENCFF401OZY, ENCFF672AOW, ENCFF807MUK 6174503432 ENCODE Processing Pipeline 2804e850fa5b8d425b209d0e3c6cefdf https://www.encodeproject.org/files/ENCFF636WSC/@@download/ENCFF636WSC.bam hg19 released mild to moderate bottlenecking ENCFF481IBV bam unfiltered alignments ENCSR360HRA ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM1A-human ENCAB006QDW DNA False 2016-10-31 ENCODE 1 100 ENCFF468WZY, ENCFF761NME, ENCFF807MUK 8859584962 ENCODE Processing Pipeline 278607eaf79a85cf17e4e155a01f427e https://www.encodeproject.org/files/ENCFF481IBV/@@download/ENCFF481IBV.bam hg19 released mild to moderate bottlenecking ENCFF984QQT bam alignments ENCSR360HRA ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM1A-human ENCAB006QDW DNA False 2016-10-31 ENCODE 2 100 ENCFF401OZY, ENCFF672AOW, ENCFF807MUK 4375593099 ENCODE Processing Pipeline a4bef7688ce02d095e1ceefc39630fd5 https://www.encodeproject.org/files/ENCFF984QQT/@@download/ENCFF984QQT.bam hg19 released mild to moderate bottlenecking ENCFF295PZT bam unfiltered alignments ENCSR360HRA ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM1A-human ENCAB006QDW DNA False 2016-10-31 ENCODE 2 100 ENCFF401OZY, ENCFF643CGH, ENCFF672AOW 6180411501 ENCODE Processing Pipeline dafe739d9be830519b4b32d3d79702d8 https://www.encodeproject.org/files/ENCFF295PZT/@@download/ENCFF295PZT.bam GRCh38 released mild to moderate bottlenecking ENCFF042LKP bam alignments ENCSR360HRA ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM1A-human ENCAB006QDW DNA False 2016-10-31 ENCODE 2 100 ENCFF401OZY, ENCFF643CGH, ENCFF672AOW 4378809873 ENCODE Processing Pipeline 57d945f4331fc823ee0c8e4305667547 https://www.encodeproject.org/files/ENCFF042LKP/@@download/ENCFF042LKP.bam GRCh38 released mild to moderate bottlenecking ENCFF892UVF bam alignments ENCSR360HRA ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM1A-human ENCAB006QDW DNA False 2016-10-31 ENCODE 1 100 ENCFF468WZY, ENCFF761NME, ENCFF807MUK 6339932850 ENCODE Processing Pipeline 402e3d4e4607caa0fcf1104a44f1c271 https://www.encodeproject.org/files/ENCFF892UVF/@@download/ENCFF892UVF.bam hg19 released mild to moderate bottlenecking ENCFF342FIU bam alignments ENCSR360HRA ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM1A-human ENCAB006QDW DNA False 2016-10-31 ENCODE 1 100 ENCFF468WZY, ENCFF643CGH, ENCFF761NME 6345095790 ENCODE Processing Pipeline 911ebfa1cb40934774919619412ac2a5 https://www.encodeproject.org/files/ENCFF342FIU/@@download/ENCFF342FIU.bam GRCh38 released mild to moderate bottlenecking ENCFF297IPL bam unfiltered alignments ENCSR360HRA ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM1A-human ENCAB006QDW DNA False 2016-10-31 ENCODE 1 100 ENCFF468WZY, ENCFF643CGH, ENCFF761NME 8866433154 ENCODE Processing Pipeline e33fa6cedf6265f8481e803eaeb807a2 https://www.encodeproject.org/files/ENCFF297IPL/@@download/ENCFF297IPL.bam GRCh38 released mild to moderate bottlenecking ENCFF167AFM bigWig signal p-value ENCSR360HRA ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM1A-human ENCAB006QDW DNA False 2016-10-31 ENCODE 1 ENCFF160VXC, ENCFF834TUP, ENCFF892UVF 1765464066 ENCODE Processing Pipeline 3f864bb2f0dca5febbb1d06e7721a7b0 https://www.encodeproject.org/files/ENCFF167AFM/@@download/ENCFF167AFM.bigWig hg19 released mild to moderate bottlenecking ENCFF490XLD bed narrowPeak peaks ENCSR360HRA ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM1A-human ENCAB006QDW DNA False 2016-10-31 ENCODE 2 ENCFF834TUP, ENCFF984QQT 7111483 ENCODE Processing Pipeline 5c956902a94641b04b8a3f59bc08f2c6 https://www.encodeproject.org/files/ENCFF490XLD/@@download/ENCFF490XLD.bed.gz hg19 released mild to moderate bottlenecking ENCFF499UMV bed narrowPeak peaks ENCSR360HRA ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM1A-human ENCAB006QDW DNA False 2016-10-31 ENCODE 1, 2 ENCFF160VXC, ENCFF834TUP, ENCFF892UVF, ENCFF984QQT 7313485 ENCODE Processing Pipeline 2541b212e7722e9bc107563074d7984d https://www.encodeproject.org/files/ENCFF499UMV/@@download/ENCFF499UMV.bed.gz hg19 released mild to moderate bottlenecking ENCFF569IJM bed narrowPeak conservative idr thresholded peaks ENCSR360HRA ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM1A-human ENCAB006QDW DNA False 2016-10-31 ENCODE 1, 2 ENCFF001TDO, ENCFF331TXU, ENCFF490XLD, ENCFF499UMV 527405 ENCODE Processing Pipeline 64a4dc051bfe39d8ba6a9ea9e1f9cdea https://www.encodeproject.org/files/ENCFF569IJM/@@download/ENCFF569IJM.bed.gz hg19 released mild to moderate bottlenecking ENCFF739HXS bigWig signal p-value ENCSR360HRA ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM1A-human ENCAB006QDW DNA False 2016-10-31 ENCODE 1, 2 ENCFF160VXC, ENCFF834TUP, ENCFF892UVF, ENCFF984QQT 2457968329 ENCODE Processing Pipeline 25689a74f00f921f26bed3e92b53632c https://www.encodeproject.org/files/ENCFF739HXS/@@download/ENCFF739HXS.bigWig hg19 released mild to moderate bottlenecking ENCFF331TXU bed narrowPeak peaks ENCSR360HRA ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM1A-human ENCAB006QDW DNA False 2016-10-31 ENCODE 1 ENCFF160VXC, ENCFF834TUP, ENCFF892UVF 7232667 ENCODE Processing Pipeline b34b2ecd91e077a9bf871828610a093d https://www.encodeproject.org/files/ENCFF331TXU/@@download/ENCFF331TXU.bed.gz hg19 released mild to moderate bottlenecking ENCFF838COI bed narrowPeak optimal idr thresholded peaks ENCSR360HRA ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM1A-human ENCAB006QDW DNA False 2016-10-31 ENCODE 1, 2 ENCFF001TDO, ENCFF331TXU, ENCFF490XLD, ENCFF499UMV 629731 ENCODE Processing Pipeline 29b3f9c5729c3aa115f9cfa92da97076 https://www.encodeproject.org/files/ENCFF838COI/@@download/ENCFF838COI.bed.gz hg19 released mild to moderate bottlenecking ENCFF006AWO bigWig signal p-value ENCSR360HRA ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM1A-human ENCAB006QDW DNA False 2016-10-31 ENCODE 2 ENCFF834TUP, ENCFF984QQT 1107530709 ENCODE Processing Pipeline b5547647f29061702c085d9bf39af229 https://www.encodeproject.org/files/ENCFF006AWO/@@download/ENCFF006AWO.bigWig hg19 released mild to moderate bottlenecking ENCFF907SYV bigWig fold change over control ENCSR360HRA ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM1A-human ENCAB006QDW DNA False 2016-10-31 ENCODE 1 ENCFF160VXC, ENCFF834TUP, ENCFF892UVF 2183604916 ENCODE Processing Pipeline a3a850ad6e6d174a2c351d8da4112ff1 https://www.encodeproject.org/files/ENCFF907SYV/@@download/ENCFF907SYV.bigWig hg19 released mild to moderate bottlenecking ENCFF696CXY bigWig fold change over control ENCSR360HRA ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM1A-human ENCAB006QDW DNA False 2016-10-31 ENCODE 2 ENCFF834TUP, ENCFF984QQT 1395537159 ENCODE Processing Pipeline d2bff5ec4c4abd2dda9a177b0662de1b https://www.encodeproject.org/files/ENCFF696CXY/@@download/ENCFF696CXY.bigWig hg19 released mild to moderate bottlenecking ENCFF464DQL bigBed narrowPeak peaks ENCSR360HRA ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM1A-human ENCAB006QDW DNA False 2016-10-31 ENCODE 1 ENCFF331TXU 13257089 ENCODE Processing Pipeline 806394f1893425ff9abf4cd400603664 https://www.encodeproject.org/files/ENCFF464DQL/@@download/ENCFF464DQL.bigBed hg19 released mild to moderate bottlenecking ENCFF104XMQ bigBed narrowPeak conservative idr thresholded peaks ENCSR360HRA ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM1A-human ENCAB006QDW DNA False 2016-10-31 ENCODE 1, 2 ENCFF569IJM 1025513 ENCODE Processing Pipeline 52f84f240de1b2e00d703b185db3faf4 https://www.encodeproject.org/files/ENCFF104XMQ/@@download/ENCFF104XMQ.bigBed hg19 released mild to moderate bottlenecking ENCFF875GPV bigBed narrowPeak optimal idr thresholded peaks ENCSR360HRA ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM1A-human ENCAB006QDW DNA False 2016-10-31 ENCODE 1, 2 ENCFF838COI 1177306 ENCODE Processing Pipeline d483f9e9a54e285a1efb3ec6a4a69cab https://www.encodeproject.org/files/ENCFF875GPV/@@download/ENCFF875GPV.bigBed hg19 released mild to moderate bottlenecking ENCFF758MEL bigWig fold change over control ENCSR360HRA ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM1A-human ENCAB006QDW DNA False 2016-10-31 ENCODE 1, 2 ENCFF160VXC, ENCFF834TUP, ENCFF892UVF, ENCFF984QQT 2631676384 ENCODE Processing Pipeline 71e50477660b13fe10415707784dbebc https://www.encodeproject.org/files/ENCFF758MEL/@@download/ENCFF758MEL.bigWig hg19 released mild to moderate bottlenecking ENCFF820CFK bigBed narrowPeak peaks ENCSR360HRA ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM1A-human ENCAB006QDW DNA False 2016-10-31 ENCODE 2 ENCFF490XLD 13186420 ENCODE Processing Pipeline cff1fdadcb589f774fc701e1022e8626 https://www.encodeproject.org/files/ENCFF820CFK/@@download/ENCFF820CFK.bigBed hg19 released mild to moderate bottlenecking ENCFF984LXO bigBed narrowPeak peaks ENCSR360HRA ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM1A-human ENCAB006QDW DNA False 2016-10-31 ENCODE 1, 2 ENCFF499UMV 13238913 ENCODE Processing Pipeline c5897dbe5e101442d52c99e2c4dac2de https://www.encodeproject.org/files/ENCFF984LXO/@@download/ENCFF984LXO.bigBed hg19 released mild to moderate bottlenecking ENCFF206FNB bigWig signal p-value ENCSR360HRA ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM1A-human ENCAB006QDW DNA False 2016-10-31 ENCODE 1 ENCFF342FIU, ENCFF712WXB, ENCFF790TAN 1747216905 ENCODE Processing Pipeline 2f4057f318d1b40f9ab0fd95d6e0fa4b https://www.encodeproject.org/files/ENCFF206FNB/@@download/ENCFF206FNB.bigWig GRCh38 released mild to moderate bottlenecking ENCFF370GFF bigWig signal p-value ENCSR360HRA ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM1A-human ENCAB006QDW DNA False 2016-10-31 ENCODE 2 ENCFF042LKP, ENCFF712WXB 1317049596 ENCODE Processing Pipeline 184a8cb77afd3b4692b6a66f1a71ff25 https://www.encodeproject.org/files/ENCFF370GFF/@@download/ENCFF370GFF.bigWig GRCh38 released mild to moderate bottlenecking ENCFF488YBA bigBed narrowPeak peaks ENCSR360HRA ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM1A-human ENCAB006QDW DNA False 2016-10-31 ENCODE 1 ENCFF457ZDJ 13265773 ENCODE Processing Pipeline 1c22d4f41659e8b2c0e2ed8dda6e7aea https://www.encodeproject.org/files/ENCFF488YBA/@@download/ENCFF488YBA.bigBed GRCh38 released mild to moderate bottlenecking ENCFF318KHB bigWig signal p-value ENCSR360HRA ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM1A-human ENCAB006QDW DNA False 2016-10-31 ENCODE 1, 2 ENCFF042LKP, ENCFF342FIU, ENCFF712WXB, ENCFF790TAN 2442533760 ENCODE Processing Pipeline 3f339f48a75a3bd4bf5487c346d6d12a https://www.encodeproject.org/files/ENCFF318KHB/@@download/ENCFF318KHB.bigWig GRCh38 released mild to moderate bottlenecking ENCFF813KRB bigWig fold change over control ENCSR360HRA ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM1A-human ENCAB006QDW DNA False 2016-10-31 ENCODE 2 ENCFF042LKP, ENCFF712WXB 1403308383 ENCODE Processing Pipeline fa51532f8673594e6a0f706487d4f823 https://www.encodeproject.org/files/ENCFF813KRB/@@download/ENCFF813KRB.bigWig GRCh38 released mild to moderate bottlenecking ENCFF044BRX bigWig fold change over control ENCSR360HRA ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM1A-human ENCAB006QDW DNA False 2016-10-31 ENCODE 1 ENCFF342FIU, ENCFF712WXB, ENCFF790TAN 2206639357 ENCODE Processing Pipeline 72443dc31c44ec52b35f6428924faf8c https://www.encodeproject.org/files/ENCFF044BRX/@@download/ENCFF044BRX.bigWig GRCh38 released mild to moderate bottlenecking ENCFF959AJT bigBed narrowPeak peaks ENCSR360HRA ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM1A-human ENCAB006QDW DNA False 2016-10-31 ENCODE 1, 2 ENCFF858BKR 13250791 ENCODE Processing Pipeline 60dc811c4cb27e0aa7ca2539049c05d8 https://www.encodeproject.org/files/ENCFF959AJT/@@download/ENCFF959AJT.bigBed GRCh38 released mild to moderate bottlenecking ENCFF097GPW bed narrowPeak peaks ENCSR360HRA ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM1A-human ENCAB006QDW DNA False 2016-10-31 ENCODE 2 ENCFF042LKP, ENCFF712WXB 7107412 ENCODE Processing Pipeline 7727f571f33ee47561150d6c024a6f74 https://www.encodeproject.org/files/ENCFF097GPW/@@download/ENCFF097GPW.bed.gz GRCh38 released mild to moderate bottlenecking ENCFF468FXH bigBed narrowPeak peaks ENCSR360HRA ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM1A-human ENCAB006QDW DNA False 2016-10-31 ENCODE 2 ENCFF097GPW 13188869 ENCODE Processing Pipeline ccdc9af5129b9e89665d7bf44f6b5964 https://www.encodeproject.org/files/ENCFF468FXH/@@download/ENCFF468FXH.bigBed GRCh38 released mild to moderate bottlenecking ENCFF644QKE bigBed narrowPeak conservative idr thresholded peaks ENCSR360HRA ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM1A-human ENCAB006QDW DNA False 2016-10-31 ENCODE 1, 2 ENCFF493NZN 1027204 ENCODE Processing Pipeline 4f9942a0d04f03fb4b6000a76da2bf01 https://www.encodeproject.org/files/ENCFF644QKE/@@download/ENCFF644QKE.bigBed GRCh38 released mild to moderate bottlenecking ENCFF483BRD bed narrowPeak optimal idr thresholded peaks ENCSR360HRA ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM1A-human ENCAB006QDW DNA False 2016-10-31 ENCODE 1, 2 ENCFF097GPW, ENCFF419RSJ, ENCFF457ZDJ, ENCFF858BKR 623757 ENCODE Processing Pipeline 3424efdcc9ed08c70164c9d973284841 https://www.encodeproject.org/files/ENCFF483BRD/@@download/ENCFF483BRD.bed.gz GRCh38 released mild to moderate bottlenecking ENCFF215RBZ bigBed narrowPeak optimal idr thresholded peaks ENCSR360HRA ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM1A-human ENCAB006QDW DNA False 2016-10-31 ENCODE 1, 2 ENCFF483BRD 1170281 ENCODE Processing Pipeline 9078ff924713d1e6ef8ca7d8005ce61c https://www.encodeproject.org/files/ENCFF215RBZ/@@download/ENCFF215RBZ.bigBed GRCh38 released mild to moderate bottlenecking ENCFF818OZI bigWig fold change over control ENCSR360HRA ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM1A-human ENCAB006QDW DNA False 2016-10-31 ENCODE 1, 2 ENCFF042LKP, ENCFF342FIU, ENCFF712WXB, ENCFF790TAN 2619607346 ENCODE Processing Pipeline 46708998a46e00ab62038bc211ba49f3 https://www.encodeproject.org/files/ENCFF818OZI/@@download/ENCFF818OZI.bigWig GRCh38 released mild to moderate bottlenecking ENCFF858BKR bed narrowPeak peaks ENCSR360HRA ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM1A-human ENCAB006QDW DNA False 2016-10-31 ENCODE 1, 2 ENCFF042LKP, ENCFF342FIU, ENCFF712WXB, ENCFF790TAN 7317511 ENCODE Processing Pipeline 6587766178988746a43b2357c305861b https://www.encodeproject.org/files/ENCFF858BKR/@@download/ENCFF858BKR.bed.gz GRCh38 released mild to moderate bottlenecking ENCFF493NZN bed narrowPeak conservative idr thresholded peaks ENCSR360HRA ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM1A-human ENCAB006QDW DNA False 2016-10-31 ENCODE 1, 2 ENCFF097GPW, ENCFF419RSJ, ENCFF457ZDJ, ENCFF858BKR 526774 ENCODE Processing Pipeline d6d3227605f8463b5d30f81339ea1c32 https://www.encodeproject.org/files/ENCFF493NZN/@@download/ENCFF493NZN.bed.gz GRCh38 released mild to moderate bottlenecking ENCFF457ZDJ bed narrowPeak peaks ENCSR360HRA ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM1A-human ENCAB006QDW DNA False 2016-10-31 ENCODE 1 ENCFF342FIU, ENCFF712WXB, ENCFF790TAN 7235079 ENCODE Processing Pipeline 9ccb995acfc2783cc2b1dc7cb8f61abb https://www.encodeproject.org/files/ENCFF457ZDJ/@@download/ENCFF457ZDJ.bed.gz GRCh38 released mild to moderate bottlenecking ENCFF267LVE fastq reads ENCSR241LIH ChIP-seq EFO:0002067 K562 cell line Homo sapiens AFF1-human ENCAB965DCO DNA False 2018-01-26 ENCODE 2 1 100 paired-ended 2 ENCFF452EKB 1793262044 Michael Snyder, Stanford ae04b4e8b7f7be0ba26a236513e909c5 https://www.encodeproject.org/files/ENCFF267LVE/@@download/ENCFF267LVE.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFA/ released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF452EKB fastq reads ENCSR241LIH ChIP-seq EFO:0002067 K562 cell line Homo sapiens AFF1-human ENCAB965DCO DNA False 2018-01-26 ENCODE 2 1 100 paired-ended 1 ENCFF267LVE 1765927169 Michael Snyder, Stanford c9517932e0e5bb5c773e0bd8bc833677 https://www.encodeproject.org/files/ENCFF452EKB/@@download/ENCFF452EKB.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFD/ released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF404ITD fastq reads ENCSR241LIH ChIP-seq EFO:0002067 K562 cell line Homo sapiens AFF1-human ENCAB965DCO DNA False 2018-01-26 ENCODE 1 1 100 paired-ended 1 ENCFF792VBK 2337168262 Michael Snyder, Stanford d4d1300de059adf0876ba7a466618cf5 https://www.encodeproject.org/files/ENCFF404ITD/@@download/ENCFF404ITD.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFF/ released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF792VBK fastq reads ENCSR241LIH ChIP-seq EFO:0002067 K562 cell line Homo sapiens AFF1-human ENCAB965DCO DNA False 2018-01-26 ENCODE 1 1 100 paired-ended 2 ENCFF404ITD 2397856069 Michael Snyder, Stanford 78e991f9f8610b1a5c7950a18f216bd9 https://www.encodeproject.org/files/ENCFF792VBK/@@download/ENCFF792VBK.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFH/ released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF699VCQ bam unfiltered alignments ENCSR241LIH ChIP-seq EFO:0002067 K562 cell line Homo sapiens AFF1-human ENCAB965DCO DNA False 2018-01-26 ENCODE 2 100 ENCFF267LVE, ENCFF452EKB, ENCFF807MUK 3815637542 ENCODE Processing Pipeline fd2155a91190fbce3696c1ca592e9d98 https://www.encodeproject.org/files/ENCFF699VCQ/@@download/ENCFF699VCQ.bam hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF710HBZ bam alignments ENCSR241LIH ChIP-seq EFO:0002067 K562 cell line Homo sapiens AFF1-human ENCAB965DCO DNA False 2018-01-26 ENCODE 2 100 ENCFF267LVE, ENCFF452EKB, ENCFF807MUK 3010702501 ENCODE Processing Pipeline e842f51951e7682b75311d8b45158da2 https://www.encodeproject.org/files/ENCFF710HBZ/@@download/ENCFF710HBZ.bam hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF514VMY bam unfiltered alignments ENCSR241LIH ChIP-seq EFO:0002067 K562 cell line Homo sapiens AFF1-human ENCAB965DCO DNA False 2018-01-26 ENCODE 1 100 ENCFF404ITD, ENCFF792VBK, ENCFF807MUK 5038509468 ENCODE Processing Pipeline f83916a23aaee578a39e9e5108d4a6e7 https://www.encodeproject.org/files/ENCFF514VMY/@@download/ENCFF514VMY.bam hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF527XUH bam alignments ENCSR241LIH ChIP-seq EFO:0002067 K562 cell line Homo sapiens AFF1-human ENCAB965DCO DNA False 2018-01-26 ENCODE 1 100 ENCFF404ITD, ENCFF792VBK, ENCFF807MUK 3948130198 ENCODE Processing Pipeline 6f4b50045274020c42e9d1b7fdb6ce17 https://www.encodeproject.org/files/ENCFF527XUH/@@download/ENCFF527XUH.bam hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF635BPD bam unfiltered alignments ENCSR241LIH ChIP-seq EFO:0002067 K562 cell line Homo sapiens AFF1-human ENCAB965DCO DNA False 2018-01-26 ENCODE 2 100 ENCFF267LVE, ENCFF452EKB, ENCFF643CGH 3810780334 ENCODE Processing Pipeline cd4ee178a601b381d4410e5740d1d1f7 https://www.encodeproject.org/files/ENCFF635BPD/@@download/ENCFF635BPD.bam GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF524KCA bam alignments ENCSR241LIH ChIP-seq EFO:0002067 K562 cell line Homo sapiens AFF1-human ENCAB965DCO DNA False 2018-01-26 ENCODE 2 100 ENCFF267LVE, ENCFF452EKB, ENCFF643CGH 3014781489 ENCODE Processing Pipeline 39e3a909edfa88a4c35a64c4ed9cb485 https://www.encodeproject.org/files/ENCFF524KCA/@@download/ENCFF524KCA.bam GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF559LTX bam unfiltered alignments ENCSR241LIH ChIP-seq EFO:0002067 K562 cell line Homo sapiens AFF1-human ENCAB965DCO DNA False 2018-01-26 ENCODE 1 100 ENCFF404ITD, ENCFF643CGH, ENCFF792VBK 5035342202 ENCODE Processing Pipeline 7868cff73d0e044dda7fc4c1a1b03ba9 https://www.encodeproject.org/files/ENCFF559LTX/@@download/ENCFF559LTX.bam GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF373JGV bam alignments ENCSR241LIH ChIP-seq EFO:0002067 K562 cell line Homo sapiens AFF1-human ENCAB965DCO DNA False 2018-01-26 ENCODE 1 100 ENCFF404ITD, ENCFF643CGH, ENCFF792VBK 3952662944 ENCODE Processing Pipeline bc93940905577d51885b9b583376eb96 https://www.encodeproject.org/files/ENCFF373JGV/@@download/ENCFF373JGV.bam GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF166BZU bigWig signal p-value ENCSR241LIH ChIP-seq EFO:0002067 K562 cell line Homo sapiens AFF1-human ENCAB965DCO DNA False 2018-01-26 ENCODE 2 ENCFF227IZS, ENCFF524KCA 943663045 ENCODE Processing Pipeline 90df2cc6472b4e887b4e4b3e34aec69a https://www.encodeproject.org/files/ENCFF166BZU/@@download/ENCFF166BZU.bigWig GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF353EYF bigBed narrowPeak peaks ENCSR241LIH ChIP-seq EFO:0002067 K562 cell line Homo sapiens AFF1-human ENCAB965DCO DNA False 2018-01-26 ENCODE 1, 2 ENCFF883RAI 13102245 ENCODE Processing Pipeline 6b62fb113f17c2e96b2c789f634bb386 https://www.encodeproject.org/files/ENCFF353EYF/@@download/ENCFF353EYF.bigBed GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF894YAR bigBed narrowPeak optimal idr thresholded peaks ENCSR241LIH ChIP-seq EFO:0002067 K562 cell line Homo sapiens AFF1-human ENCAB965DCO DNA False 2018-01-26 ENCODE 1, 2 ENCFF869BYK 437090 ENCODE Processing Pipeline 5d8e3c9c9a911e7b64a10065dc8505ac https://www.encodeproject.org/files/ENCFF894YAR/@@download/ENCFF894YAR.bigBed GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF323TYY bigWig signal p-value ENCSR241LIH ChIP-seq EFO:0002067 K562 cell line Homo sapiens AFF1-human ENCAB965DCO DNA False 2018-01-26 ENCODE 1, 2 ENCFF227IZS, ENCFF373JGV, ENCFF524KCA, ENCFF910IKB 1608446747 ENCODE Processing Pipeline e6141cc7238f8501ecb96fc63c65ec43 https://www.encodeproject.org/files/ENCFF323TYY/@@download/ENCFF323TYY.bigWig GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF354BBS bigWig signal p-value ENCSR241LIH ChIP-seq EFO:0002067 K562 cell line Homo sapiens AFF1-human ENCAB965DCO DNA False 2018-01-26 ENCODE 1 ENCFF373JGV, ENCFF910IKB 975554763 ENCODE Processing Pipeline ff25ce47816eaa9c4a612e078f908fa3 https://www.encodeproject.org/files/ENCFF354BBS/@@download/ENCFF354BBS.bigWig GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF703OGS bigWig fold change over control ENCSR241LIH ChIP-seq EFO:0002067 K562 cell line Homo sapiens AFF1-human ENCAB965DCO DNA False 2018-01-26 ENCODE 2 ENCFF227IZS, ENCFF524KCA 949925873 ENCODE Processing Pipeline 67c12653ec907e8f0a00f3a24ff6000f https://www.encodeproject.org/files/ENCFF703OGS/@@download/ENCFF703OGS.bigWig GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF422AHV bigWig fold change over control ENCSR241LIH ChIP-seq EFO:0002067 K562 cell line Homo sapiens AFF1-human ENCAB965DCO DNA False 2018-01-26 ENCODE 1, 2 ENCFF227IZS, ENCFF373JGV, ENCFF524KCA, ENCFF910IKB 1970375095 ENCODE Processing Pipeline 85fe4c0fb7ff1dacd8d7f317f5dfae59 https://www.encodeproject.org/files/ENCFF422AHV/@@download/ENCFF422AHV.bigWig GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF631OBD bed narrowPeak peaks ENCSR241LIH ChIP-seq EFO:0002067 K562 cell line Homo sapiens AFF1-human ENCAB965DCO DNA False 2018-01-26 ENCODE 2 ENCFF227IZS, ENCFF524KCA 6600323 ENCODE Processing Pipeline 9b19e1d26cb438cdf7f1b6605ce16265 https://www.encodeproject.org/files/ENCFF631OBD/@@download/ENCFF631OBD.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF883RAI bed narrowPeak peaks ENCSR241LIH ChIP-seq EFO:0002067 K562 cell line Homo sapiens AFF1-human ENCAB965DCO DNA False 2018-01-26 ENCODE 1, 2 ENCFF227IZS, ENCFF373JGV, ENCFF524KCA, ENCFF910IKB 7192904 ENCODE Processing Pipeline 7b28f99b4cc58396792f70d6135de317 https://www.encodeproject.org/files/ENCFF883RAI/@@download/ENCFF883RAI.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF869BYK bed narrowPeak optimal idr thresholded peaks ENCSR241LIH ChIP-seq EFO:0002067 K562 cell line Homo sapiens AFF1-human ENCAB965DCO DNA False 2018-01-26 ENCODE 1, 2 ENCFF419RSJ, ENCFF631OBD, ENCFF658ICM, ENCFF883RAI 184513 ENCODE Processing Pipeline 1d7cd15c0c354140544e566a31b75604 https://www.encodeproject.org/files/ENCFF869BYK/@@download/ENCFF869BYK.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF618GCH bigBed narrowPeak peaks ENCSR241LIH ChIP-seq EFO:0002067 K562 cell line Homo sapiens AFF1-human ENCAB965DCO DNA False 2018-01-26 ENCODE 2 ENCFF631OBD 13213587 ENCODE Processing Pipeline 7929c2a2fca4f849579b0c87b8519356 https://www.encodeproject.org/files/ENCFF618GCH/@@download/ENCFF618GCH.bigBed GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF722XQA bigWig fold change over control ENCSR241LIH ChIP-seq EFO:0002067 K562 cell line Homo sapiens AFF1-human ENCAB965DCO DNA False 2018-01-26 ENCODE 1 ENCFF373JGV, ENCFF910IKB 1134064055 ENCODE Processing Pipeline 54b8a7a3fa90163a06e67af30594f3df https://www.encodeproject.org/files/ENCFF722XQA/@@download/ENCFF722XQA.bigWig GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF658ICM bed narrowPeak peaks ENCSR241LIH ChIP-seq EFO:0002067 K562 cell line Homo sapiens AFF1-human ENCAB965DCO DNA False 2018-01-26 ENCODE 1 ENCFF373JGV, ENCFF910IKB 6620635 ENCODE Processing Pipeline 015577ef6c12600028e4b5555f9e0bf6 https://www.encodeproject.org/files/ENCFF658ICM/@@download/ENCFF658ICM.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF954QSX bed narrowPeak conservative idr thresholded peaks ENCSR241LIH ChIP-seq EFO:0002067 K562 cell line Homo sapiens AFF1-human ENCAB965DCO DNA False 2018-01-26 ENCODE 1, 2 ENCFF419RSJ, ENCFF631OBD, ENCFF658ICM, ENCFF883RAI 131747 ENCODE Processing Pipeline 933ad235ebc4f2d14566ae60b99d8476 https://www.encodeproject.org/files/ENCFF954QSX/@@download/ENCFF954QSX.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF908PTM bigBed narrowPeak conservative idr thresholded peaks ENCSR241LIH ChIP-seq EFO:0002067 K562 cell line Homo sapiens AFF1-human ENCAB965DCO DNA False 2018-01-26 ENCODE 1, 2 ENCFF954QSX 347699 ENCODE Processing Pipeline 118f348c98f8c68830e23d5c11e1cb5e https://www.encodeproject.org/files/ENCFF908PTM/@@download/ENCFF908PTM.bigBed GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF104JYY bigBed narrowPeak peaks ENCSR241LIH ChIP-seq EFO:0002067 K562 cell line Homo sapiens AFF1-human ENCAB965DCO DNA False 2018-01-26 ENCODE 1 ENCFF658ICM 13305304 ENCODE Processing Pipeline 103fda1883a355ad41595a310ac951e2 https://www.encodeproject.org/files/ENCFF104JYY/@@download/ENCFF104JYY.bigBed GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF039VJA bigBed narrowPeak peaks ENCSR241LIH ChIP-seq EFO:0002067 K562 cell line Homo sapiens AFF1-human ENCAB965DCO DNA False 2018-01-26 ENCODE 1, 2 ENCFF824QXV 13094164 ENCODE Processing Pipeline a37b1e88bbbb9bbf5b9a52c6f23dd43a https://www.encodeproject.org/files/ENCFF039VJA/@@download/ENCFF039VJA.bigBed hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF062IUC bigBed narrowPeak optimal idr thresholded peaks ENCSR241LIH ChIP-seq EFO:0002067 K562 cell line Homo sapiens AFF1-human ENCAB965DCO DNA False 2018-01-26 ENCODE 1, 2 ENCFF076MSV 441558 ENCODE Processing Pipeline 724d52634fc4dc93241e00e1b134c6d5 https://www.encodeproject.org/files/ENCFF062IUC/@@download/ENCFF062IUC.bigBed hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF870PDS bigWig fold change over control ENCSR241LIH ChIP-seq EFO:0002067 K562 cell line Homo sapiens AFF1-human ENCAB965DCO DNA False 2018-01-26 ENCODE 1, 2 ENCFF051LWI, ENCFF527XUH, ENCFF581ZJL, ENCFF710HBZ 1955440710 ENCODE Processing Pipeline 177abdf423c0004e3c297ab1199d1114 https://www.encodeproject.org/files/ENCFF870PDS/@@download/ENCFF870PDS.bigWig hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF447WIA bed narrowPeak peaks ENCSR241LIH ChIP-seq EFO:0002067 K562 cell line Homo sapiens AFF1-human ENCAB965DCO DNA False 2018-01-26 ENCODE 1 ENCFF527XUH, ENCFF581ZJL 6622782 ENCODE Processing Pipeline 0fc65caa5a29e1d351889a9150ccd059 https://www.encodeproject.org/files/ENCFF447WIA/@@download/ENCFF447WIA.bed.gz hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF579KSC bed narrowPeak conservative idr thresholded peaks ENCSR241LIH ChIP-seq EFO:0002067 K562 cell line Homo sapiens AFF1-human ENCAB965DCO DNA False 2018-01-26 ENCODE 1, 2 ENCFF001TDO, ENCFF447WIA, ENCFF824QXV, ENCFF929HKG 132178 ENCODE Processing Pipeline dc783a5f1c899e228a149220be310d47 https://www.encodeproject.org/files/ENCFF579KSC/@@download/ENCFF579KSC.bed.gz hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF911LQZ bigBed narrowPeak conservative idr thresholded peaks ENCSR241LIH ChIP-seq EFO:0002067 K562 cell line Homo sapiens AFF1-human ENCAB965DCO DNA False 2018-01-26 ENCODE 1, 2 ENCFF579KSC 344939 ENCODE Processing Pipeline 487a1c2eadb9f50e2c78a838ff4bcd8c https://www.encodeproject.org/files/ENCFF911LQZ/@@download/ENCFF911LQZ.bigBed hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF661JVC bigWig signal p-value ENCSR241LIH ChIP-seq EFO:0002067 K562 cell line Homo sapiens AFF1-human ENCAB965DCO DNA False 2018-01-26 ENCODE 1 ENCFF527XUH, ENCFF581ZJL 1049885890 ENCODE Processing Pipeline cb8a2132656754101744f5165625c691 https://www.encodeproject.org/files/ENCFF661JVC/@@download/ENCFF661JVC.bigWig hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF602EUV bigWig fold change over control ENCSR241LIH ChIP-seq EFO:0002067 K562 cell line Homo sapiens AFF1-human ENCAB965DCO DNA False 2018-01-26 ENCODE 1 ENCFF527XUH, ENCFF581ZJL 1135019743 ENCODE Processing Pipeline 4acd131259827916b2ef4f44abe3d847 https://www.encodeproject.org/files/ENCFF602EUV/@@download/ENCFF602EUV.bigWig hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF802XIQ bigWig signal p-value ENCSR241LIH ChIP-seq EFO:0002067 K562 cell line Homo sapiens AFF1-human ENCAB965DCO DNA False 2018-01-26 ENCODE 2 ENCFF051LWI, ENCFF710HBZ 1016369167 ENCODE Processing Pipeline 9b4a11d3e9abe81569fe4a666d26ec8e https://www.encodeproject.org/files/ENCFF802XIQ/@@download/ENCFF802XIQ.bigWig hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF888ULX bigWig signal p-value ENCSR241LIH ChIP-seq EFO:0002067 K562 cell line Homo sapiens AFF1-human ENCAB965DCO DNA False 2018-01-26 ENCODE 1, 2 ENCFF051LWI, ENCFF527XUH, ENCFF581ZJL, ENCFF710HBZ 1670341154 ENCODE Processing Pipeline a524f6f56d5ccf115abbc8b56d695929 https://www.encodeproject.org/files/ENCFF888ULX/@@download/ENCFF888ULX.bigWig hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF254SOP bigBed narrowPeak peaks ENCSR241LIH ChIP-seq EFO:0002067 K562 cell line Homo sapiens AFF1-human ENCAB965DCO DNA False 2018-01-26 ENCODE 1 ENCFF447WIA 13292625 ENCODE Processing Pipeline 04caf148422c6576ca5268dce2d66dd7 https://www.encodeproject.org/files/ENCFF254SOP/@@download/ENCFF254SOP.bigBed hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF626KUT bigWig fold change over control ENCSR241LIH ChIP-seq EFO:0002067 K562 cell line Homo sapiens AFF1-human ENCAB965DCO DNA False 2018-01-26 ENCODE 2 ENCFF051LWI, ENCFF710HBZ 945490380 ENCODE Processing Pipeline 8958e7368eddb1b25f057d145ef05131 https://www.encodeproject.org/files/ENCFF626KUT/@@download/ENCFF626KUT.bigWig hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF824QXV bed narrowPeak peaks ENCSR241LIH ChIP-seq EFO:0002067 K562 cell line Homo sapiens AFF1-human ENCAB965DCO DNA False 2018-01-26 ENCODE 1, 2 ENCFF051LWI, ENCFF527XUH, ENCFF581ZJL, ENCFF710HBZ 7194279 ENCODE Processing Pipeline 1eb0173ea8cccdc441a9e2e343607aeb https://www.encodeproject.org/files/ENCFF824QXV/@@download/ENCFF824QXV.bed.gz hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF638TJG bigBed narrowPeak peaks ENCSR241LIH ChIP-seq EFO:0002067 K562 cell line Homo sapiens AFF1-human ENCAB965DCO DNA False 2018-01-26 ENCODE 2 ENCFF929HKG 13214559 ENCODE Processing Pipeline 192a9b01533ecc410f8792e357e07fe0 https://www.encodeproject.org/files/ENCFF638TJG/@@download/ENCFF638TJG.bigBed hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF076MSV bed narrowPeak optimal idr thresholded peaks ENCSR241LIH ChIP-seq EFO:0002067 K562 cell line Homo sapiens AFF1-human ENCAB965DCO DNA False 2018-01-26 ENCODE 1, 2 ENCFF001TDO, ENCFF447WIA, ENCFF824QXV, ENCFF929HKG 189535 ENCODE Processing Pipeline a8d2daa22d837ec2dba4082ef01d10e6 https://www.encodeproject.org/files/ENCFF076MSV/@@download/ENCFF076MSV.bed.gz hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF929HKG bed narrowPeak peaks ENCSR241LIH ChIP-seq EFO:0002067 K562 cell line Homo sapiens AFF1-human ENCAB965DCO DNA False 2018-01-26 ENCODE 2 ENCFF051LWI, ENCFF710HBZ 6616578 ENCODE Processing Pipeline 52c7e8259913e8e9180a9d2c6578d013 https://www.encodeproject.org/files/ENCFF929HKG/@@download/ENCFF929HKG.bed.gz hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF233HVB fastq reads ENCSR780BBJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZZZ3-human ENCAB797CMZ DNA False 2016-12-05 ENCODE 2 1 100 paired-ended 1 ENCFF778PUP 1866602337 Michael Snyder, Stanford dc72b22237dc2a7be43a30d43c4e9b87 SRA:SRR5112074 https://www.encodeproject.org/files/ENCFF233HVB/@@download/ENCFF233HVB.fastq.gz Illumina HiSeq 4000 /files/ENCFF498JMO/ released borderline replicate concordance, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity ENCFF491EOP fastq reads ENCSR780BBJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZZZ3-human ENCAB797CMZ DNA False 2016-12-05 ENCODE 1 1 100 paired-ended 2 ENCFF960PEL 3618726318 Michael Snyder, Stanford 95b9e99f443d37f11be941d043d1e027 SRA:SRR5112073 https://www.encodeproject.org/files/ENCFF491EOP/@@download/ENCFF491EOP.fastq.gz Illumina HiSeq 4000 /files/ENCFF837MIV/ released borderline replicate concordance, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity ENCFF960PEL fastq reads ENCSR780BBJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZZZ3-human ENCAB797CMZ DNA False 2016-12-05 ENCODE 1 1 100 paired-ended 1 ENCFF491EOP 3257514616 Michael Snyder, Stanford cc94abd92307f91475d2b43a07f70ecd SRA:SRR5112073 https://www.encodeproject.org/files/ENCFF960PEL/@@download/ENCFF960PEL.fastq.gz Illumina HiSeq 4000 /files/ENCFF259GQA/ released borderline replicate concordance, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity ENCFF778PUP fastq reads ENCSR780BBJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZZZ3-human ENCAB797CMZ DNA False 2016-12-05 ENCODE 2 1 100 paired-ended 2 ENCFF233HVB 2069760994 Michael Snyder, Stanford c47ee9fb4204ae557acd3b7af316e217 SRA:SRR5112074 https://www.encodeproject.org/files/ENCFF778PUP/@@download/ENCFF778PUP.fastq.gz Illumina HiSeq 4000 /files/ENCFF502GTS/ released borderline replicate concordance, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity ENCFF520QTI bam unfiltered alignments ENCSR780BBJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZZZ3-human ENCAB797CMZ DNA False 2016-12-05 ENCODE 2 100 ENCFF233HVB, ENCFF643CGH, ENCFF778PUP 4004084868 ENCODE Processing Pipeline dfbb1c4dc619d2a9589c96130226480a https://www.encodeproject.org/files/ENCFF520QTI/@@download/ENCFF520QTI.bam GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity ENCFF463UQC bam unfiltered alignments ENCSR780BBJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZZZ3-human ENCAB797CMZ DNA False 2016-12-05 ENCODE 2 100 ENCFF233HVB, ENCFF778PUP, ENCFF807MUK 3998519100 ENCODE Processing Pipeline 0c48c1b2693fbe62f37fb9dd153e97d2 https://www.encodeproject.org/files/ENCFF463UQC/@@download/ENCFF463UQC.bam hg19 released borderline replicate concordance, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity ENCFF653MWT bam unfiltered alignments ENCSR780BBJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZZZ3-human ENCAB797CMZ DNA False 2016-12-05 ENCODE 1 100 ENCFF491EOP, ENCFF643CGH, ENCFF960PEL 6373146339 ENCODE Processing Pipeline 925366bb8b26c7450e8d5c7bd8330870 https://www.encodeproject.org/files/ENCFF653MWT/@@download/ENCFF653MWT.bam GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity ENCFF240SIM bam unfiltered alignments ENCSR780BBJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZZZ3-human ENCAB797CMZ DNA False 2016-12-05 ENCODE 1 100 ENCFF491EOP, ENCFF807MUK, ENCFF960PEL 6370170035 ENCODE Processing Pipeline d3dcb02fa9d8d3380564634db535aba7 https://www.encodeproject.org/files/ENCFF240SIM/@@download/ENCFF240SIM.bam hg19 released borderline replicate concordance, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity ENCFF548YYR bam alignments ENCSR780BBJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZZZ3-human ENCAB797CMZ DNA False 2016-12-05 ENCODE 2 100 ENCFF233HVB, ENCFF643CGH, ENCFF778PUP 3283055132 ENCODE Processing Pipeline 9d5e7efc78fbbb0645c7603b2b48f7a7 https://www.encodeproject.org/files/ENCFF548YYR/@@download/ENCFF548YYR.bam GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity ENCFF712WEK bam alignments ENCSR780BBJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZZZ3-human ENCAB797CMZ DNA False 2016-12-05 ENCODE 2 100 ENCFF233HVB, ENCFF778PUP, ENCFF807MUK 3280078269 ENCODE Processing Pipeline 07c5e8bdab58cd83a8daaebbfde5ad40 https://www.encodeproject.org/files/ENCFF712WEK/@@download/ENCFF712WEK.bam hg19 released borderline replicate concordance, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity ENCFF066EHS bam alignments ENCSR780BBJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZZZ3-human ENCAB797CMZ DNA False 2016-12-05 ENCODE 1 100 ENCFF491EOP, ENCFF807MUK, ENCFF960PEL 4313227770 ENCODE Processing Pipeline fb20ae7df16f48f9ee1d4f1cb80ee55f https://www.encodeproject.org/files/ENCFF066EHS/@@download/ENCFF066EHS.bam hg19 released borderline replicate concordance, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity ENCFF566EXS bam alignments ENCSR780BBJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZZZ3-human ENCAB797CMZ DNA False 2016-12-05 ENCODE 1 100 ENCFF491EOP, ENCFF643CGH, ENCFF960PEL 4316611671 ENCODE Processing Pipeline e9a7ae03e24cab5aa080d0b6be6ee9a4 https://www.encodeproject.org/files/ENCFF566EXS/@@download/ENCFF566EXS.bam GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity ENCFF535VWM bigWig signal p-value ENCSR780BBJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZZZ3-human ENCAB797CMZ DNA False 2016-12-05 ENCODE 2 ENCFF160VXC, ENCFF712WEK 982566481 ENCODE Processing Pipeline 9f30517ceb209778d90da752420e146d https://www.encodeproject.org/files/ENCFF535VWM/@@download/ENCFF535VWM.bigWig hg19 released borderline replicate concordance, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity ENCFF971HJE bigWig signal p-value ENCSR780BBJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZZZ3-human ENCAB797CMZ DNA False 2016-12-05 ENCODE 1 ENCFF066EHS, ENCFF834TUP 1142023750 ENCODE Processing Pipeline df65f303fc1a74479d308ff57d25220e https://www.encodeproject.org/files/ENCFF971HJE/@@download/ENCFF971HJE.bigWig hg19 released borderline replicate concordance, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity ENCFF947SEG bigWig signal p-value ENCSR780BBJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZZZ3-human ENCAB797CMZ DNA False 2016-12-05 ENCODE 1, 2 ENCFF066EHS, ENCFF160VXC, ENCFF712WEK, ENCFF834TUP 1866499730 ENCODE Processing Pipeline a33417ad8ebda2dc0913095fa8830e5d https://www.encodeproject.org/files/ENCFF947SEG/@@download/ENCFF947SEG.bigWig hg19 released borderline replicate concordance, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity ENCFF856KCV bigWig fold change over control ENCSR780BBJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZZZ3-human ENCAB797CMZ DNA False 2016-12-05 ENCODE 1 ENCFF066EHS, ENCFF834TUP 1437133600 ENCODE Processing Pipeline 56007896865a94faab5418721d82a4cd https://www.encodeproject.org/files/ENCFF856KCV/@@download/ENCFF856KCV.bigWig hg19 released borderline replicate concordance, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity ENCFF333HUK bigWig fold change over control ENCSR780BBJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZZZ3-human ENCAB797CMZ DNA False 2016-12-05 ENCODE 2 ENCFF160VXC, ENCFF712WEK 1222635387 ENCODE Processing Pipeline 9ba08cb4a8a471a57a3dbcbead8919f6 https://www.encodeproject.org/files/ENCFF333HUK/@@download/ENCFF333HUK.bigWig hg19 released borderline replicate concordance, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity ENCFF716WJE bigWig fold change over control ENCSR780BBJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZZZ3-human ENCAB797CMZ DNA False 2016-12-05 ENCODE 1, 2 ENCFF066EHS, ENCFF160VXC, ENCFF712WEK, ENCFF834TUP 2276451760 ENCODE Processing Pipeline da3a4f9f8f075f10bfd488132340947a https://www.encodeproject.org/files/ENCFF716WJE/@@download/ENCFF716WJE.bigWig hg19 released borderline replicate concordance, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity ENCFF433ANO bed narrowPeak peaks ENCSR780BBJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZZZ3-human ENCAB797CMZ DNA False 2016-12-05 ENCODE 1 ENCFF066EHS, ENCFF834TUP 7144829 ENCODE Processing Pipeline fe359d4ff2dce87656e7ebd6b6d138ba https://www.encodeproject.org/files/ENCFF433ANO/@@download/ENCFF433ANO.bed.gz hg19 released borderline replicate concordance, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity ENCFF639RPL bed narrowPeak peaks ENCSR780BBJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZZZ3-human ENCAB797CMZ DNA False 2016-12-05 ENCODE 1, 2 ENCFF066EHS, ENCFF160VXC, ENCFF712WEK, ENCFF834TUP 7251086 ENCODE Processing Pipeline 082aa1a21dc8e4ed61552495835dd97a https://www.encodeproject.org/files/ENCFF639RPL/@@download/ENCFF639RPL.bed.gz hg19 released borderline replicate concordance, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity ENCFF975UYT bed narrowPeak peaks ENCSR780BBJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZZZ3-human ENCAB797CMZ DNA False 2016-12-05 ENCODE 2 ENCFF160VXC, ENCFF712WEK 6769806 ENCODE Processing Pipeline 1d5437af2fa6db05277da419a4a3e02d https://www.encodeproject.org/files/ENCFF975UYT/@@download/ENCFF975UYT.bed.gz hg19 released borderline replicate concordance, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity ENCFF137RKC bigBed narrowPeak peaks ENCSR780BBJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZZZ3-human ENCAB797CMZ DNA False 2016-12-05 ENCODE 1, 2 ENCFF639RPL 12789509 ENCODE Processing Pipeline 4ef6fffe07eca2238113800deffde557 https://www.encodeproject.org/files/ENCFF137RKC/@@download/ENCFF137RKC.bigBed hg19 released borderline replicate concordance, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity ENCFF372JYA bigBed narrowPeak peaks ENCSR780BBJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZZZ3-human ENCAB797CMZ DNA False 2016-12-05 ENCODE 1 ENCFF433ANO 12866367 ENCODE Processing Pipeline a47653a23fd0960c292054c8d6e22299 https://www.encodeproject.org/files/ENCFF372JYA/@@download/ENCFF372JYA.bigBed hg19 released borderline replicate concordance, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity ENCFF954LZI bigBed narrowPeak peaks ENCSR780BBJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZZZ3-human ENCAB797CMZ DNA False 2016-12-05 ENCODE 2 ENCFF975UYT 12982156 ENCODE Processing Pipeline f3b9a9fa8cb1f1409e39814c582bcd09 https://www.encodeproject.org/files/ENCFF954LZI/@@download/ENCFF954LZI.bigBed hg19 released borderline replicate concordance, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity ENCFF056MQX bed narrowPeak conservative idr thresholded peaks ENCSR780BBJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZZZ3-human ENCAB797CMZ DNA False 2016-12-05 ENCODE 1, 2 ENCFF001TDO, ENCFF433ANO, ENCFF639RPL, ENCFF975UYT 34582 ENCODE Processing Pipeline b25af72a0a0f32331706d9b075e55983 https://www.encodeproject.org/files/ENCFF056MQX/@@download/ENCFF056MQX.bed.gz hg19 released borderline replicate concordance, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity ENCFF588OLK bed narrowPeak optimal idr thresholded peaks ENCSR780BBJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZZZ3-human ENCAB797CMZ DNA False 2016-12-05 ENCODE 1, 2 ENCFF001TDO, ENCFF433ANO, ENCFF639RPL, ENCFF975UYT 59489 ENCODE Processing Pipeline 21ad5e41efc93bdc0af0f6d786d80664 https://www.encodeproject.org/files/ENCFF588OLK/@@download/ENCFF588OLK.bed.gz hg19 released borderline replicate concordance, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity ENCFF078MCN bigBed narrowPeak conservative idr thresholded peaks ENCSR780BBJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZZZ3-human ENCAB797CMZ DNA False 2016-12-05 ENCODE 1, 2 ENCFF056MQX 127220 ENCODE Processing Pipeline 5caee75c74443a620e349c208db755ca https://www.encodeproject.org/files/ENCFF078MCN/@@download/ENCFF078MCN.bigBed hg19 released borderline replicate concordance, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity ENCFF622VGH bigBed narrowPeak optimal idr thresholded peaks ENCSR780BBJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZZZ3-human ENCAB797CMZ DNA False 2016-12-05 ENCODE 1, 2 ENCFF588OLK 168197 ENCODE Processing Pipeline 37d50d55b3b2e8b6f14deb350bdf7166 https://www.encodeproject.org/files/ENCFF622VGH/@@download/ENCFF622VGH.bigBed hg19 released borderline replicate concordance, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity ENCFF967DYI bigWig signal p-value ENCSR780BBJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZZZ3-human ENCAB797CMZ DNA False 2016-12-05 ENCODE 1 ENCFF566EXS, ENCFF712WXB 1466661989 ENCODE Processing Pipeline 971fb36165f789666c8d1c097f5cf79e https://www.encodeproject.org/files/ENCFF967DYI/@@download/ENCFF967DYI.bigWig GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity ENCFF356KXG bigWig signal p-value ENCSR780BBJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZZZ3-human ENCAB797CMZ DNA False 2016-12-05 ENCODE 2 ENCFF548YYR, ENCFF790TAN 1004058055 ENCODE Processing Pipeline 85c45cd582fd87149d2df4c0825e167b https://www.encodeproject.org/files/ENCFF356KXG/@@download/ENCFF356KXG.bigWig GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity ENCFF319MYI bigWig signal p-value ENCSR780BBJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZZZ3-human ENCAB797CMZ DNA False 2016-12-05 ENCODE 1, 2 ENCFF548YYR, ENCFF566EXS, ENCFF712WXB, ENCFF790TAN 1861692438 ENCODE Processing Pipeline a9d9c09d7921c1c0ed72ec77d49a8827 https://www.encodeproject.org/files/ENCFF319MYI/@@download/ENCFF319MYI.bigWig GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity ENCFF991FBH bigWig fold change over control ENCSR780BBJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZZZ3-human ENCAB797CMZ DNA False 2016-12-05 ENCODE 1 ENCFF566EXS, ENCFF712WXB 1432644046 ENCODE Processing Pipeline 6a11dd3695a58ceef323373164d3502f https://www.encodeproject.org/files/ENCFF991FBH/@@download/ENCFF991FBH.bigWig GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity ENCFF791SAZ bigWig fold change over control ENCSR780BBJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZZZ3-human ENCAB797CMZ DNA False 2016-12-05 ENCODE 2 ENCFF548YYR, ENCFF790TAN 1204982710 ENCODE Processing Pipeline f9d88ba04d311aa9871a4dcda01e10cd https://www.encodeproject.org/files/ENCFF791SAZ/@@download/ENCFF791SAZ.bigWig GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity ENCFF681ZVH bigWig fold change over control ENCSR780BBJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZZZ3-human ENCAB797CMZ DNA False 2016-12-05 ENCODE 1, 2 ENCFF548YYR, ENCFF566EXS, ENCFF712WXB, ENCFF790TAN 2266477884 ENCODE Processing Pipeline 77cb5dab20defe4c7ed1ab5e5f6dbb01 https://www.encodeproject.org/files/ENCFF681ZVH/@@download/ENCFF681ZVH.bigWig GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity ENCFF469MGU bed narrowPeak peaks ENCSR780BBJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZZZ3-human ENCAB797CMZ DNA False 2016-12-05 ENCODE 1, 2 ENCFF548YYR, ENCFF566EXS, ENCFF712WXB, ENCFF790TAN 7250021 ENCODE Processing Pipeline 240a656325dee2867f0ecd8afff2a0e0 https://www.encodeproject.org/files/ENCFF469MGU/@@download/ENCFF469MGU.bed.gz GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity ENCFF821HLM bed narrowPeak peaks ENCSR780BBJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZZZ3-human ENCAB797CMZ DNA False 2016-12-05 ENCODE 2 ENCFF548YYR, ENCFF790TAN 6643297 ENCODE Processing Pipeline 37c2b74d0d2245710ffa2cc1d4d4b798 https://www.encodeproject.org/files/ENCFF821HLM/@@download/ENCFF821HLM.bed.gz GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity ENCFF129QWO bed narrowPeak conservative idr thresholded peaks ENCSR780BBJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZZZ3-human ENCAB797CMZ DNA False 2016-12-05 ENCODE 1, 2 ENCFF419RSJ, ENCFF469MGU, ENCFF821HLM, ENCFF964KTH 35013 ENCODE Processing Pipeline 3e35ed26efb21aa07e2847ba8095ebfe https://www.encodeproject.org/files/ENCFF129QWO/@@download/ENCFF129QWO.bed.gz GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity ENCFF964KTH bed narrowPeak peaks ENCSR780BBJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZZZ3-human ENCAB797CMZ DNA False 2016-12-05 ENCODE 1 ENCFF566EXS, ENCFF712WXB 7100368 ENCODE Processing Pipeline f57af245ccb8818ca69fc56985889588 https://www.encodeproject.org/files/ENCFF964KTH/@@download/ENCFF964KTH.bed.gz GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity ENCFF157ICW bigBed narrowPeak peaks ENCSR780BBJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZZZ3-human ENCAB797CMZ DNA False 2016-12-05 ENCODE 2 ENCFF821HLM 12991449 ENCODE Processing Pipeline 1c6add449a57bd71ee0f0e89776724a8 https://www.encodeproject.org/files/ENCFF157ICW/@@download/ENCFF157ICW.bigBed GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity ENCFF735ZAO bigBed narrowPeak peaks ENCSR780BBJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZZZ3-human ENCAB797CMZ DNA False 2016-12-05 ENCODE 1, 2 ENCFF469MGU 12799015 ENCODE Processing Pipeline fce2b4d05788f5c1ef9551cad0411f4d https://www.encodeproject.org/files/ENCFF735ZAO/@@download/ENCFF735ZAO.bigBed GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity ENCFF945HJR bed narrowPeak optimal idr thresholded peaks ENCSR780BBJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZZZ3-human ENCAB797CMZ DNA False 2016-12-05 ENCODE 1, 2 ENCFF419RSJ, ENCFF469MGU, ENCFF821HLM, ENCFF964KTH 56074 ENCODE Processing Pipeline 33f82cda31323b371851f3b446a0760f https://www.encodeproject.org/files/ENCFF945HJR/@@download/ENCFF945HJR.bed.gz GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity ENCFF143HZX bigBed narrowPeak optimal idr thresholded peaks ENCSR780BBJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZZZ3-human ENCAB797CMZ DNA False 2016-12-05 ENCODE 1, 2 ENCFF945HJR 164330 ENCODE Processing Pipeline 89c8e9e9816f85cccf5cb3bcfa4fa6a9 https://www.encodeproject.org/files/ENCFF143HZX/@@download/ENCFF143HZX.bigBed GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity ENCFF480RTG bigBed narrowPeak peaks ENCSR780BBJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZZZ3-human ENCAB797CMZ DNA False 2016-12-05 ENCODE 1 ENCFF964KTH 12873076 ENCODE Processing Pipeline f8795744e9fa4f056fe1c3258d863c16 https://www.encodeproject.org/files/ENCFF480RTG/@@download/ENCFF480RTG.bigBed GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity ENCFF494RZN bigBed narrowPeak conservative idr thresholded peaks ENCSR780BBJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZZZ3-human ENCAB797CMZ DNA False 2016-12-05 ENCODE 1, 2 ENCFF129QWO 128911 ENCODE Processing Pipeline e97ccee90b888cf3e2183f9400a263c2 https://www.encodeproject.org/files/ENCFF494RZN/@@download/ENCFF494RZN.bigBed GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity ENCFF000PWN bigBed broadPeak peaks ENCSR000BRT ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX3-human ENCAB000AEW DNA see document see document False 2012-02-29 ENCODE 1 1 ENCFF001UJC 1270457 Richard Myers, HAIB 11fa906b2efbb795177d11991d69f831 https://www.encodeproject.org/files/ENCFF000PWN/@@download/ENCFF000PWN.bigBed hg19 archived borderline replicate concordance, inconsistent platforms, low read length biological replicates with identical biosample ENCFF000PWO bigBed broadPeak peaks ENCSR000BRT ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX3-human ENCAB000AEW DNA see document see document False 2012-02-29 ENCODE 2 1 ENCFF001UJD 473181 Richard Myers, HAIB 422bd845e7363a78c94fedc6422bb312 https://www.encodeproject.org/files/ENCFF000PWO/@@download/ENCFF000PWO.bigBed hg19 archived borderline replicate concordance, inconsistent platforms, low read length biological replicates with identical biosample ENCFF000PWP bam alignments ENCSR000BRT ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX3-human ENCAB000AEW DNA see document see document False 2012-02-29 ENCODE 1 ENCFF000PXA 1866438744 Richard Myers, HAIB 23d62150202f52babc58f627070f4975 https://www.encodeproject.org/files/ENCFF000PWP/@@download/ENCFF000PWP.bam hg19 archived borderline replicate concordance, inconsistent platforms, low read length biological replicates with identical biosample ENCFF000PWQ bam alignments ENCSR000BRT ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX3-human ENCAB000AEW DNA see document see document False 2012-02-29 ENCODE 2 ENCFF000PXB 1780938257 Richard Myers, HAIB 6b1f143272cccc584fc2a52311a11c6b https://www.encodeproject.org/files/ENCFF000PWQ/@@download/ENCFF000PWQ.bam hg19 archived borderline replicate concordance, inconsistent platforms, low read length biological replicates with identical biosample ENCFF000PWR bigWig raw signal ENCSR000BRT ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX3-human ENCAB000AEW DNA see document see document False 2012-02-29 ENCODE 1 1 63189771 Richard Myers, HAIB 162db24316758414b637f6401c442dc3 https://www.encodeproject.org/files/ENCFF000PWR/@@download/ENCFF000PWR.bigWig hg19 archived borderline replicate concordance, inconsistent platforms, low read length biological replicates with identical biosample, missing derived_from ENCFF000PWS bigWig raw signal ENCSR000BRT ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX3-human ENCAB000AEW DNA see document see document False 2012-02-29 ENCODE 2 1 28552306 Richard Myers, HAIB 73efb5e90fec0b896a11f358fd798ee6 https://www.encodeproject.org/files/ENCFF000PWS/@@download/ENCFF000PWS.bigWig hg19 archived borderline replicate concordance, inconsistent platforms, low read length biological replicates with identical biosample, missing derived_from ENCFF000PXA fastq reads ENCSR000BRT ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX3-human ENCAB000AEW DNA see document see document False 2012-02-29 ENCODE 1 1 36 single-ended 1851618159 Richard Myers, HAIB 173d82c37549c7820c744561cb60f503 https://www.encodeproject.org/files/ENCFF000PXA/@@download/ENCFF000PXA.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000QFG/ released borderline replicate concordance, inconsistent platforms, low read length biological replicates with identical biosample ENCFF000PXB fastq reads ENCSR000BRT ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX3-human ENCAB000AEW DNA see document see document False 2012-02-29 ENCODE 2 1 36 single-ended 1737766650 Richard Myers, HAIB 53ce87e97d51047f811c8d867c18fedf https://www.encodeproject.org/files/ENCFF000PXB/@@download/ENCFF000PXB.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000QFG/ released borderline replicate concordance, inconsistent platforms, low read length biological replicates with identical biosample ENCFF001UJC bed broadPeak peaks ENCSR000BRT ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX3-human ENCAB000AEW DNA see document see document False 2012-02-29 ENCODE 1 1 755568 Richard Myers, HAIB 0680a3e8b22b1807f9780998637981ee https://www.encodeproject.org/files/ENCFF001UJC/@@download/ENCFF001UJC.bed.gz hg19 archived borderline replicate concordance, inconsistent platforms, low read length biological replicates with identical biosample, missing derived_from ENCFF001UJD bed broadPeak peaks ENCSR000BRT ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX3-human ENCAB000AEW DNA see document see document False 2012-02-29 ENCODE 2 1 244531 Richard Myers, HAIB 34e29cd979c51c24a2281844874a386f https://www.encodeproject.org/files/ENCFF001UJD/@@download/ENCFF001UJD.bed.gz hg19 archived borderline replicate concordance, inconsistent platforms, low read length biological replicates with identical biosample, missing derived_from ENCFF002CLQ bed narrowPeak optimal idr thresholded peaks ENCSR000BRT ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX3-human ENCAB000AEW DNA see document see document False 2012-02-29 ENCODE 466076 ENCODE Consortium Analysis Working Group 3995b6b545fecf8ce9fe78928e2563f5 https://www.encodeproject.org/files/ENCFF002CLQ/@@download/ENCFF002CLQ.bed.gz hg19 archived borderline replicate concordance, inconsistent platforms, low read length biological replicates with identical biosample, missing derived_from ENCFF163PZR bigBed narrowPeak optimal idr thresholded peaks ENCSR000BRT ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX3-human ENCAB000AEW DNA see document see document False 2012-02-29 ENCODE ENCFF002CLQ 1052105 ENCODE Consortium 930e8de7f3e7435c5e241c40d5dee8e7 https://www.encodeproject.org/files/ENCFF163PZR/@@download/ENCFF163PZR.bigBed hg19 archived borderline replicate concordance, inconsistent platforms, low read length biological replicates with identical biosample ENCFF093QMN bam alignments ENCSR000BRT ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX3-human ENCAB000AEW DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000PXB, ENCFF643CGH 1203989147 ENCODE Processing Pipeline fa7a8809aab0c4542e79d3323b44a1e8 https://www.encodeproject.org/files/ENCFF093QMN/@@download/ENCFF093QMN.bam GRCh38 released borderline replicate concordance, inconsistent platforms, low read length biological replicates with identical biosample ENCFF607PEE bam unfiltered alignments ENCSR000BRT ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX3-human ENCAB000AEW DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000PXB, ENCFF643CGH 1963005705 ENCODE Processing Pipeline e1e403fabf15efc03871bd8d727fbed6 https://www.encodeproject.org/files/ENCFF607PEE/@@download/ENCFF607PEE.bam GRCh38 released borderline replicate concordance, inconsistent platforms, low read length biological replicates with identical biosample ENCFF971ILL bam unfiltered alignments ENCSR000BRT ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX3-human ENCAB000AEW DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000PXA, ENCFF643CGH 2053051037 ENCODE Processing Pipeline fb32eaf1ee85b038bdb1592b417817e1 https://www.encodeproject.org/files/ENCFF971ILL/@@download/ENCFF971ILL.bam GRCh38 released borderline replicate concordance, inconsistent platforms, low read length biological replicates with identical biosample ENCFF289RGM bam alignments ENCSR000BRT ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX3-human ENCAB000AEW DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000PXA, ENCFF643CGH 1316020814 ENCODE Processing Pipeline ad269b05d0a2e31f14b5d768a01ffcd8 https://www.encodeproject.org/files/ENCFF289RGM/@@download/ENCFF289RGM.bam GRCh38 released borderline replicate concordance, inconsistent platforms, low read length biological replicates with identical biosample ENCFF977GVI bam unfiltered alignments ENCSR000BRT ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX3-human ENCAB000AEW DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000PXA, ENCFF807MUK 2050213154 ENCODE Processing Pipeline 0323365f583743bbfcc4d93e373b5192 https://www.encodeproject.org/files/ENCFF977GVI/@@download/ENCFF977GVI.bam hg19 released borderline replicate concordance, inconsistent platforms, low read length biological replicates with identical biosample ENCFF289YVH bam unfiltered alignments ENCSR000BRT ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX3-human ENCAB000AEW DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000PXB, ENCFF807MUK 1956275025 ENCODE Processing Pipeline 826a54bdb7731f3869504cbad91e83df https://www.encodeproject.org/files/ENCFF289YVH/@@download/ENCFF289YVH.bam hg19 released borderline replicate concordance, inconsistent platforms, low read length biological replicates with identical biosample ENCFF725HAK bam alignments ENCSR000BRT ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX3-human ENCAB000AEW DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000PXA, ENCFF807MUK 1316308524 ENCODE Processing Pipeline d246a9cf545c29e2afafc93ffaf574f7 https://www.encodeproject.org/files/ENCFF725HAK/@@download/ENCFF725HAK.bam hg19 released borderline replicate concordance, inconsistent platforms, low read length biological replicates with identical biosample ENCFF045NWB bam alignments ENCSR000BRT ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX3-human ENCAB000AEW DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000PXB, ENCFF807MUK 1204326321 ENCODE Processing Pipeline b714da8ce6d1dc2f3c9beb9db078b3da https://www.encodeproject.org/files/ENCFF045NWB/@@download/ENCFF045NWB.bam hg19 released borderline replicate concordance, inconsistent platforms, low read length biological replicates with identical biosample ENCFF466LDG bigWig signal p-value ENCSR000BRT ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX3-human ENCAB000AEW DNA see document see document False 2012-02-29 ENCODE 1 ENCFF522HDC, ENCFF725HAK 775789555 ENCODE Processing Pipeline 1cdb8b3185f10209ed5e3b97395d3df6 https://www.encodeproject.org/files/ENCFF466LDG/@@download/ENCFF466LDG.bigWig hg19 released borderline replicate concordance, inconsistent platforms, low read length biological replicates with identical biosample ENCFF125FCL bigWig signal p-value ENCSR000BRT ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX3-human ENCAB000AEW DNA see document see document False 2012-02-29 ENCODE 1 ENCFF289RGM, ENCFF836OEO 656550195 ENCODE Processing Pipeline 1c3c96e242be13e09852b7666296e33c https://www.encodeproject.org/files/ENCFF125FCL/@@download/ENCFF125FCL.bigWig GRCh38 released borderline replicate concordance, inconsistent platforms, low read length biological replicates with identical biosample ENCFF226YCL bigWig signal p-value ENCSR000BRT ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX3-human ENCAB000AEW DNA see document see document False 2012-02-29 ENCODE 2 ENCFF045NWB, ENCFF522HDC 777034036 ENCODE Processing Pipeline 8432287fcec0ac14b89bb9f48ff5c6fc https://www.encodeproject.org/files/ENCFF226YCL/@@download/ENCFF226YCL.bigWig hg19 released borderline replicate concordance, inconsistent platforms, low read length biological replicates with identical biosample ENCFF664AQZ bigWig signal p-value ENCSR000BRT ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX3-human ENCAB000AEW DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF045NWB, ENCFF522HDC, ENCFF725HAK 812056828 ENCODE Processing Pipeline 6e53b2f2bc4e855e731a37ea7cc28054 https://www.encodeproject.org/files/ENCFF664AQZ/@@download/ENCFF664AQZ.bigWig hg19 released borderline replicate concordance, inconsistent platforms, low read length biological replicates with identical biosample ENCFF985RCB bigWig signal p-value ENCSR000BRT ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX3-human ENCAB000AEW DNA see document see document False 2012-02-29 ENCODE 2 ENCFF093QMN, ENCFF836OEO 779052459 ENCODE Processing Pipeline 5410da20c12378b86db89e1092071c6f https://www.encodeproject.org/files/ENCFF985RCB/@@download/ENCFF985RCB.bigWig GRCh38 released borderline replicate concordance, inconsistent platforms, low read length biological replicates with identical biosample ENCFF036JHJ bigWig fold change over control ENCSR000BRT ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX3-human ENCAB000AEW DNA see document see document False 2012-02-29 ENCODE 1 ENCFF522HDC, ENCFF725HAK 625262504 ENCODE Processing Pipeline 2ebd9b05b47bac0218327d5ff92b8f7f https://www.encodeproject.org/files/ENCFF036JHJ/@@download/ENCFF036JHJ.bigWig hg19 released borderline replicate concordance, inconsistent platforms, low read length biological replicates with identical biosample ENCFF933FTY bigWig signal p-value ENCSR000BRT ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX3-human ENCAB000AEW DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF093QMN, ENCFF289RGM, ENCFF836OEO 831929536 ENCODE Processing Pipeline 8af1123cc808938d2be47d2670ed3d8a https://www.encodeproject.org/files/ENCFF933FTY/@@download/ENCFF933FTY.bigWig GRCh38 released borderline replicate concordance, inconsistent platforms, low read length biological replicates with identical biosample ENCFF680KQO bigWig fold change over control ENCSR000BRT ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX3-human ENCAB000AEW DNA see document see document False 2012-02-29 ENCODE 2 ENCFF045NWB, ENCFF522HDC 589041900 ENCODE Processing Pipeline f2adf4b8202755b04379c830eb627943 https://www.encodeproject.org/files/ENCFF680KQO/@@download/ENCFF680KQO.bigWig hg19 released borderline replicate concordance, inconsistent platforms, low read length biological replicates with identical biosample ENCFF630YDI bigWig fold change over control ENCSR000BRT ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX3-human ENCAB000AEW DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF045NWB, ENCFF522HDC, ENCFF725HAK 986725976 ENCODE Processing Pipeline 8558a2830dba52d02856fffdf1069867 https://www.encodeproject.org/files/ENCFF630YDI/@@download/ENCFF630YDI.bigWig hg19 released borderline replicate concordance, inconsistent platforms, low read length biological replicates with identical biosample ENCFF399FJD bigWig fold change over control ENCSR000BRT ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX3-human ENCAB000AEW DNA see document see document False 2012-02-29 ENCODE 1 ENCFF289RGM, ENCFF836OEO 627839816 ENCODE Processing Pipeline baa35eca099c60403ef00cd4dbf40f8d https://www.encodeproject.org/files/ENCFF399FJD/@@download/ENCFF399FJD.bigWig GRCh38 released borderline replicate concordance, inconsistent platforms, low read length biological replicates with identical biosample ENCFF831QNI bed narrowPeak peaks ENCSR000BRT ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX3-human ENCAB000AEW DNA see document see document False 2012-02-29 ENCODE 1 ENCFF522HDC, ENCFF725HAK 6882452 ENCODE Processing Pipeline b636262d4059d2227749aab51878ac9d https://www.encodeproject.org/files/ENCFF831QNI/@@download/ENCFF831QNI.bed.gz hg19 released borderline replicate concordance, inconsistent platforms, low read length biological replicates with identical biosample ENCFF653UJT bed narrowPeak peaks ENCSR000BRT ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX3-human ENCAB000AEW DNA see document see document False 2012-02-29 ENCODE 2 ENCFF045NWB, ENCFF522HDC 6103983 ENCODE Processing Pipeline 7384bf8990c218b47cac769d4470c370 https://www.encodeproject.org/files/ENCFF653UJT/@@download/ENCFF653UJT.bed.gz hg19 released borderline replicate concordance, inconsistent platforms, low read length biological replicates with identical biosample ENCFF255QHM bigWig fold change over control ENCSR000BRT ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX3-human ENCAB000AEW DNA see document see document False 2012-02-29 ENCODE 2 ENCFF093QMN, ENCFF836OEO 584813937 ENCODE Processing Pipeline ecb89dd80e4fd2e0ea68c2b5a95e3878 https://www.encodeproject.org/files/ENCFF255QHM/@@download/ENCFF255QHM.bigWig GRCh38 released borderline replicate concordance, inconsistent platforms, low read length biological replicates with identical biosample ENCFF064WFD bed narrowPeak peaks ENCSR000BRT ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX3-human ENCAB000AEW DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF045NWB, ENCFF522HDC, ENCFF725HAK 7028966 ENCODE Processing Pipeline 2671d55a6b2309c18e827d8b9a49f29b https://www.encodeproject.org/files/ENCFF064WFD/@@download/ENCFF064WFD.bed.gz hg19 released borderline replicate concordance, inconsistent platforms, low read length biological replicates with identical biosample ENCFF974LAB bigBed narrowPeak peaks ENCSR000BRT ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX3-human ENCAB000AEW DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF064WFD 12944098 ENCODE Processing Pipeline c870a86c577e4bbe51648f21d6d7d3b0 https://www.encodeproject.org/files/ENCFF974LAB/@@download/ENCFF974LAB.bigBed hg19 released borderline replicate concordance, inconsistent platforms, low read length biological replicates with identical biosample ENCFF561SEG bigBed narrowPeak peaks ENCSR000BRT ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX3-human ENCAB000AEW DNA see document see document False 2012-02-29 ENCODE 1 ENCFF831QNI 12780872 ENCODE Processing Pipeline 54f17dc580a15fa855a9294d750e168d https://www.encodeproject.org/files/ENCFF561SEG/@@download/ENCFF561SEG.bigBed hg19 released borderline replicate concordance, inconsistent platforms, low read length biological replicates with identical biosample ENCFF012RKG bigBed narrowPeak peaks ENCSR000BRT ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX3-human ENCAB000AEW DNA see document see document False 2012-02-29 ENCODE 2 ENCFF653UJT 13283047 ENCODE Processing Pipeline 46c6b4166760c10b0cebb7ba4c0b68be https://www.encodeproject.org/files/ENCFF012RKG/@@download/ENCFF012RKG.bigBed hg19 released borderline replicate concordance, inconsistent platforms, low read length biological replicates with identical biosample ENCFF692KUW bed narrowPeak conservative idr thresholded peaks ENCSR000BRT ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX3-human ENCAB000AEW DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF001TDO, ENCFF064WFD, ENCFF653UJT, ENCFF831QNI 325281 ENCODE Processing Pipeline acb123ed11f022aff111eecf80eaa575 https://www.encodeproject.org/files/ENCFF692KUW/@@download/ENCFF692KUW.bed.gz hg19 released borderline replicate concordance, inconsistent platforms, low read length biological replicates with identical biosample ENCFF518DVK bigBed narrowPeak conservative idr thresholded peaks ENCSR000BRT ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX3-human ENCAB000AEW DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF692KUW 697187 ENCODE Processing Pipeline 9f0cd44eba23f3ec5f4d6824d998d0f8 https://www.encodeproject.org/files/ENCFF518DVK/@@download/ENCFF518DVK.bigBed hg19 released borderline replicate concordance, inconsistent platforms, low read length biological replicates with identical biosample ENCFF455TDM bed narrowPeak optimal idr thresholded peaks ENCSR000BRT ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX3-human ENCAB000AEW DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF001TDO, ENCFF064WFD, ENCFF653UJT, ENCFF831QNI 465905 ENCODE Processing Pipeline 5c2ed80d53a4008c80594b13b59766fa https://www.encodeproject.org/files/ENCFF455TDM/@@download/ENCFF455TDM.bed.gz hg19 released borderline replicate concordance, inconsistent platforms, low read length biological replicates with identical biosample ENCFF646PFR bigWig fold change over control ENCSR000BRT ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX3-human ENCAB000AEW DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF093QMN, ENCFF289RGM, ENCFF836OEO 1004221305 ENCODE Processing Pipeline a04779a87c467cd4588b0300e094c5b1 https://www.encodeproject.org/files/ENCFF646PFR/@@download/ENCFF646PFR.bigWig GRCh38 released borderline replicate concordance, inconsistent platforms, low read length biological replicates with identical biosample ENCFF570OIT bigBed narrowPeak optimal idr thresholded peaks ENCSR000BRT ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX3-human ENCAB000AEW DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF455TDM 910980 ENCODE Processing Pipeline 13077c69e1b05e0c696235348cfbbb35 https://www.encodeproject.org/files/ENCFF570OIT/@@download/ENCFF570OIT.bigBed hg19 released borderline replicate concordance, inconsistent platforms, low read length biological replicates with identical biosample ENCFF469CQE bed narrowPeak peaks ENCSR000BRT ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX3-human ENCAB000AEW DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF093QMN, ENCFF289RGM, ENCFF836OEO 7033869 ENCODE Processing Pipeline 9459d9e7a6ba5c6e5c9e13420d233016 https://www.encodeproject.org/files/ENCFF469CQE/@@download/ENCFF469CQE.bed.gz GRCh38 released borderline replicate concordance, inconsistent platforms, low read length biological replicates with identical biosample ENCFF388XAJ bigBed narrowPeak peaks ENCSR000BRT ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX3-human ENCAB000AEW DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF469CQE 12938462 ENCODE Processing Pipeline 4b67268ae01203f82af2519ccd46f5da https://www.encodeproject.org/files/ENCFF388XAJ/@@download/ENCFF388XAJ.bigBed GRCh38 released borderline replicate concordance, inconsistent platforms, low read length biological replicates with identical biosample ENCFF848QNF bed narrowPeak peaks ENCSR000BRT ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX3-human ENCAB000AEW DNA see document see document False 2012-02-29 ENCODE 1 ENCFF289RGM, ENCFF836OEO 6843039 ENCODE Processing Pipeline c6395b38e2eb101a6a1b18372a817f7f https://www.encodeproject.org/files/ENCFF848QNF/@@download/ENCFF848QNF.bed.gz GRCh38 released borderline replicate concordance, inconsistent platforms, low read length biological replicates with identical biosample ENCFF275XNU bed narrowPeak conservative idr thresholded peaks ENCSR000BRT ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX3-human ENCAB000AEW DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF419RSJ, ENCFF469CQE, ENCFF725LHJ, ENCFF848QNF 325309 ENCODE Processing Pipeline 11a6b527fa4aa0a41993ef20d1def353 https://www.encodeproject.org/files/ENCFF275XNU/@@download/ENCFF275XNU.bed.gz GRCh38 released borderline replicate concordance, inconsistent platforms, low read length biological replicates with identical biosample ENCFF951BQB bed narrowPeak optimal idr thresholded peaks ENCSR000BRT ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX3-human ENCAB000AEW DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF419RSJ, ENCFF469CQE, ENCFF725LHJ, ENCFF848QNF 466486 ENCODE Processing Pipeline a7402798ec5e5c167abce02eb04f525f https://www.encodeproject.org/files/ENCFF951BQB/@@download/ENCFF951BQB.bed.gz GRCh38 released borderline replicate concordance, inconsistent platforms, low read length biological replicates with identical biosample ENCFF940AFO bigBed narrowPeak optimal idr thresholded peaks ENCSR000BRT ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX3-human ENCAB000AEW DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF951BQB 910672 ENCODE Processing Pipeline 8787a45a0b9f13337e3e7ca08626cd1d https://www.encodeproject.org/files/ENCFF940AFO/@@download/ENCFF940AFO.bigBed GRCh38 released borderline replicate concordance, inconsistent platforms, low read length biological replicates with identical biosample ENCFF725LHJ bed narrowPeak peaks ENCSR000BRT ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX3-human ENCAB000AEW DNA see document see document False 2012-02-29 ENCODE 2 ENCFF093QMN, ENCFF836OEO 6076313 ENCODE Processing Pipeline 9330733615eb556207191e4d69257d4f https://www.encodeproject.org/files/ENCFF725LHJ/@@download/ENCFF725LHJ.bed.gz GRCh38 released borderline replicate concordance, inconsistent platforms, low read length biological replicates with identical biosample ENCFF219LDI bigBed narrowPeak peaks ENCSR000BRT ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX3-human ENCAB000AEW DNA see document see document False 2012-02-29 ENCODE 1 ENCFF848QNF 12767291 ENCODE Processing Pipeline 1648f8f5a96cdde2f7cbe1bf00d39d02 https://www.encodeproject.org/files/ENCFF219LDI/@@download/ENCFF219LDI.bigBed GRCh38 released borderline replicate concordance, inconsistent platforms, low read length biological replicates with identical biosample ENCFF045ELV bigBed narrowPeak peaks ENCSR000BRT ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX3-human ENCAB000AEW DNA see document see document False 2012-02-29 ENCODE 2 ENCFF725LHJ 13297206 ENCODE Processing Pipeline b1e487a3214167506b49cd333613cb51 https://www.encodeproject.org/files/ENCFF045ELV/@@download/ENCFF045ELV.bigBed GRCh38 released borderline replicate concordance, inconsistent platforms, low read length biological replicates with identical biosample ENCFF188YLF bigBed narrowPeak conservative idr thresholded peaks ENCSR000BRT ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX3-human ENCAB000AEW DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF275XNU 697966 ENCODE Processing Pipeline 890527a1e35b44fc24e2939ecc8dcf4e https://www.encodeproject.org/files/ENCFF188YLF/@@download/ENCFF188YLF.bigBed GRCh38 released borderline replicate concordance, inconsistent platforms, low read length biological replicates with identical biosample ENCFF000PWE bam alignments ENCSR000BKH ChIP-seq EFO:0002067 K562 cell line Homo sapiens BCLAF1-human ENCAB000AEH DNA see document see document False 2011-07-18 ENCODE 1 ENCFF000PWX 720538081 Richard Myers, HAIB ebaf8016dcf3df3de025e1252e3c8702 https://www.encodeproject.org/files/ENCFF000PWE/@@download/ENCFF000PWE.bam hg19 released mixed read lengths, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample control insufficient read depth ENCFF000PWF bam alignments ENCSR000BKH ChIP-seq EFO:0002067 K562 cell line Homo sapiens BCLAF1-human ENCAB000AEH DNA see document see document False 2011-07-18 ENCODE 2 ENCFF000PWM 557536240 Richard Myers, HAIB 51666bc2804b2fe5ab82358780541359 https://www.encodeproject.org/files/ENCFF000PWF/@@download/ENCFF000PWF.bam hg19 released mixed read lengths, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample control insufficient read depth ENCFF000PWG bigBed broadPeak peaks ENCSR000BKH ChIP-seq EFO:0002067 K562 cell line Homo sapiens BCLAF1-human ENCAB000AEH DNA see document see document False 2011-07-18 ENCODE 1 1 ENCFF001UJA 111857 Richard Myers, HAIB 1e15281beb62aaaf35c64701289ad0c1 https://www.encodeproject.org/files/ENCFF000PWG/@@download/ENCFF000PWG.bigBed hg19 released mixed read lengths, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample control insufficient read depth ENCFF000PWH bigBed broadPeak peaks ENCSR000BKH ChIP-seq EFO:0002067 K562 cell line Homo sapiens BCLAF1-human ENCAB000AEH DNA see document see document False 2011-07-18 ENCODE 2 1 ENCFF001UJB 113235 Richard Myers, HAIB 341a3050a12bf3e7280c2f6a9ac7ada5 https://www.encodeproject.org/files/ENCFF000PWH/@@download/ENCFF000PWH.bigBed hg19 released mixed read lengths, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample control insufficient read depth ENCFF000PWJ bigWig raw signal ENCSR000BKH ChIP-seq EFO:0002067 K562 cell line Homo sapiens BCLAF1-human ENCAB000AEH DNA see document see document False 2011-07-18 ENCODE 1 1 4132178 Richard Myers, HAIB 6745d65ccbaed5ca873be353470d29c2 https://www.encodeproject.org/files/ENCFF000PWJ/@@download/ENCFF000PWJ.bigWig hg19 released mixed read lengths, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample, missing derived_from control insufficient read depth ENCFF000PWK bigWig raw signal ENCSR000BKH ChIP-seq EFO:0002067 K562 cell line Homo sapiens BCLAF1-human ENCAB000AEH DNA see document see document False 2011-07-18 ENCODE 2 1 3817070 Richard Myers, HAIB e292a5f8ca3b0c72e80e03a8c917aacd https://www.encodeproject.org/files/ENCFF000PWK/@@download/ENCFF000PWK.bigWig hg19 released mixed read lengths, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample, missing derived_from control insufficient read depth ENCFF000PWM fastq reads ENCSR000BKH ChIP-seq EFO:0002067 K562 cell line Homo sapiens BCLAF1-human ENCAB000AEH DNA see document see document False 2011-07-18 ENCODE 2 1 36 single-ended 458943335 Richard Myers, HAIB 7e39870827a7f0cd15cf57baa209be36 https://www.encodeproject.org/files/ENCFF000PWM/@@download/ENCFF000PWM.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000QEX/ released mixed read lengths, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample control insufficient read depth ENCFF000PWX fastq reads ENCSR000BKH ChIP-seq EFO:0002067 K562 cell line Homo sapiens BCLAF1-human ENCAB000AEH DNA see document see document False 2011-07-18 ENCODE 1 1 76 single-ended 1392869617 Richard Myers, HAIB f4447127e090b80ea9dab7f201e53678 https://www.encodeproject.org/files/ENCFF000PWX/@@download/ENCFF000PWX.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000QEX/ released mixed read lengths, low read depth, mild to moderate bottlenecking, inconsistent control read length, low read length biological replicates with identical biosample control insufficient read depth ENCFF001UJA bed broadPeak peaks ENCSR000BKH ChIP-seq EFO:0002067 K562 cell line Homo sapiens BCLAF1-human ENCAB000AEH DNA see document see document False 2011-07-18 ENCODE 1 1 37409 Richard Myers, HAIB 6fd77f66e0f4d0b77ed4aa658d2e99d0 https://www.encodeproject.org/files/ENCFF001UJA/@@download/ENCFF001UJA.bed.gz hg19 released mixed read lengths, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample, missing derived_from control insufficient read depth ENCFF001UJB bed broadPeak peaks ENCSR000BKH ChIP-seq EFO:0002067 K562 cell line Homo sapiens BCLAF1-human ENCAB000AEH DNA see document see document False 2011-07-18 ENCODE 2 1 38675 Richard Myers, HAIB 3f18ccd4f8287ec6d4cd8247770797af https://www.encodeproject.org/files/ENCFF001UJB/@@download/ENCFF001UJB.bed.gz hg19 released mixed read lengths, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample, missing derived_from control insufficient read depth ENCFF002CLP bed narrowPeak optimal idr thresholded peaks ENCSR000BKH ChIP-seq EFO:0002067 K562 cell line Homo sapiens BCLAF1-human ENCAB000AEH DNA see document see document False 2011-07-18 ENCODE 87373 ENCODE Consortium Analysis Working Group 84b23b96b527536feaeb011ecb3ad402 https://www.encodeproject.org/files/ENCFF002CLP/@@download/ENCFF002CLP.bed.gz hg19 released mixed read lengths, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample, missing derived_from control insufficient read depth ENCFF425JRS bigBed narrowPeak optimal idr thresholded peaks ENCSR000BKH ChIP-seq EFO:0002067 K562 cell line Homo sapiens BCLAF1-human ENCAB000AEH DNA see document see document False 2011-07-18 ENCODE ENCFF002CLP 217446 ENCODE Consortium 282206bcc3b18c3f0f8b92dc3e8594f9 https://www.encodeproject.org/files/ENCFF425JRS/@@download/ENCFF425JRS.bigBed hg19 released mixed read lengths, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample control insufficient read depth ENCFF155DTB bam unfiltered alignments ENCSR000BKH ChIP-seq EFO:0002067 K562 cell line Homo sapiens BCLAF1-human ENCAB000AEH DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000PWM, ENCFF807MUK 655723262 ENCODE Processing Pipeline 16abde6570ba634984c90c7c346fe4d5 https://www.encodeproject.org/files/ENCFF155DTB/@@download/ENCFF155DTB.bam hg19 released mixed read lengths, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample control insufficient read depth ENCFF477WUN bam alignments ENCSR000BKH ChIP-seq EFO:0002067 K562 cell line Homo sapiens BCLAF1-human ENCAB000AEH DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000PWM, ENCFF807MUK 397215851 ENCODE Processing Pipeline 000529a709d164a7b08e8d9381b02c07 https://www.encodeproject.org/files/ENCFF477WUN/@@download/ENCFF477WUN.bam hg19 released mixed read lengths, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample control insufficient read depth ENCFF944QTZ bam unfiltered alignments ENCSR000BKH ChIP-seq EFO:0002067 K562 cell line Homo sapiens BCLAF1-human ENCAB000AEH DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000PWM, ENCFF643CGH 657193655 ENCODE Processing Pipeline 8a38def61e89d0be68234a386f9f4993 https://www.encodeproject.org/files/ENCFF944QTZ/@@download/ENCFF944QTZ.bam GRCh38 released mixed read lengths, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample control insufficient read depth ENCFF554KEG bam alignments ENCSR000BKH ChIP-seq EFO:0002067 K562 cell line Homo sapiens BCLAF1-human ENCAB000AEH DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000PWM, ENCFF643CGH 396985738 ENCODE Processing Pipeline 5de208dd52266608c88b19b9e202a800 https://www.encodeproject.org/files/ENCFF554KEG/@@download/ENCFF554KEG.bam GRCh38 released mixed read lengths, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample control insufficient read depth ENCFF570LWC bam unfiltered alignments ENCSR000BKH ChIP-seq EFO:0002067 K562 cell line Homo sapiens BCLAF1-human ENCAB000AEH DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000PWX, ENCFF807MUK 982724671 ENCODE Processing Pipeline 6624bf8ddb7b8641600fa1a3aae7113d https://www.encodeproject.org/files/ENCFF570LWC/@@download/ENCFF570LWC.bam hg19 released mixed read lengths, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample control insufficient read depth ENCFF096ONF bam unfiltered alignments ENCSR000BKH ChIP-seq EFO:0002067 K562 cell line Homo sapiens BCLAF1-human ENCAB000AEH DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000PWX, ENCFF643CGH 984318198 ENCODE Processing Pipeline d77dd3c35a24702b2be39a6f20d703b3 https://www.encodeproject.org/files/ENCFF096ONF/@@download/ENCFF096ONF.bam GRCh38 released mixed read lengths, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample control insufficient read depth ENCFF144FIS bam alignments ENCSR000BKH ChIP-seq EFO:0002067 K562 cell line Homo sapiens BCLAF1-human ENCAB000AEH DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000PWX, ENCFF807MUK 538905345 ENCODE Processing Pipeline 4ccc9f5f42e756338655459cb70233c1 https://www.encodeproject.org/files/ENCFF144FIS/@@download/ENCFF144FIS.bam hg19 released mixed read lengths, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample control insufficient read depth ENCFF339YBR bam alignments ENCSR000BKH ChIP-seq EFO:0002067 K562 cell line Homo sapiens BCLAF1-human ENCAB000AEH DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000PWX, ENCFF643CGH 538645887 ENCODE Processing Pipeline 755e102a0073dee13ed0d84d5bff6031 https://www.encodeproject.org/files/ENCFF339YBR/@@download/ENCFF339YBR.bam GRCh38 released mixed read lengths, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample control insufficient read depth ENCFF185HLZ bed narrowPeak peaks ENCSR000BKH ChIP-seq EFO:0002067 K562 cell line Homo sapiens BCLAF1-human ENCAB000AEH DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF144FIS, ENCFF477WUN, ENCFF750MIM 4909274 ENCODE Processing Pipeline 5f04cd4551c1346375f9e1b5209e8658 https://www.encodeproject.org/files/ENCFF185HLZ/@@download/ENCFF185HLZ.bed.gz hg19 released mixed read lengths, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample control insufficient read depth ENCFF111ACL bigWig signal p-value ENCSR000BKH ChIP-seq EFO:0002067 K562 cell line Homo sapiens BCLAF1-human ENCAB000AEH DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF144FIS, ENCFF477WUN, ENCFF750MIM 202624620 ENCODE Processing Pipeline bbcdb762f02bf274d36436560b862748 https://www.encodeproject.org/files/ENCFF111ACL/@@download/ENCFF111ACL.bigWig hg19 released mixed read lengths, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample control insufficient read depth ENCFF616PGU bigWig fold change over control ENCSR000BKH ChIP-seq EFO:0002067 K562 cell line Homo sapiens BCLAF1-human ENCAB000AEH DNA see document see document False 2011-07-18 ENCODE 2 ENCFF477WUN, ENCFF750MIM 197347743 ENCODE Processing Pipeline ad370558af4533007592f2b31cd20073 https://www.encodeproject.org/files/ENCFF616PGU/@@download/ENCFF616PGU.bigWig hg19 released mixed read lengths, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample control insufficient read depth ENCFF626JTH bigWig fold change over control ENCSR000BKH ChIP-seq EFO:0002067 K562 cell line Homo sapiens BCLAF1-human ENCAB000AEH DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF144FIS, ENCFF477WUN, ENCFF750MIM 349306273 ENCODE Processing Pipeline 90ab4462159eea14f8579117d35b0646 https://www.encodeproject.org/files/ENCFF626JTH/@@download/ENCFF626JTH.bigWig hg19 released mixed read lengths, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample control insufficient read depth ENCFF048RNJ bigBed narrowPeak peaks ENCSR000BKH ChIP-seq EFO:0002067 K562 cell line Homo sapiens BCLAF1-human ENCAB000AEH DNA see document see document False 2011-07-18 ENCODE 1 ENCFF674BPH 1635474 ENCODE Processing Pipeline 0cba7ff37df01632b5f0f8861d312e46 https://www.encodeproject.org/files/ENCFF048RNJ/@@download/ENCFF048RNJ.bigBed hg19 released mixed read lengths, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample control insufficient read depth ENCFF699ZGA bigBed narrowPeak peaks ENCSR000BKH ChIP-seq EFO:0002067 K562 cell line Homo sapiens BCLAF1-human ENCAB000AEH DNA see document see document False 2011-07-18 ENCODE 2 ENCFF650YKB 7372238 ENCODE Processing Pipeline 0ea46f83cf243e5fc873d0e8c4527c84 https://www.encodeproject.org/files/ENCFF699ZGA/@@download/ENCFF699ZGA.bigBed hg19 released mixed read lengths, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample control insufficient read depth ENCFF861ADT bigBed narrowPeak peaks ENCSR000BKH ChIP-seq EFO:0002067 K562 cell line Homo sapiens BCLAF1-human ENCAB000AEH DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF185HLZ 10472407 ENCODE Processing Pipeline 15e27ab0725a5ed7044e9419034924e0 https://www.encodeproject.org/files/ENCFF861ADT/@@download/ENCFF861ADT.bigBed hg19 released mixed read lengths, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample control insufficient read depth ENCFF267IDK bigWig signal p-value ENCSR000BKH ChIP-seq EFO:0002067 K562 cell line Homo sapiens BCLAF1-human ENCAB000AEH DNA see document see document False 2011-07-18 ENCODE 1 ENCFF144FIS, ENCFF750MIM 209140686 ENCODE Processing Pipeline b8718cb0cb2e65abf789c258b42765b8 https://www.encodeproject.org/files/ENCFF267IDK/@@download/ENCFF267IDK.bigWig hg19 released mixed read lengths, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample control insufficient read depth ENCFF467UPX bigWig signal p-value ENCSR000BKH ChIP-seq EFO:0002067 K562 cell line Homo sapiens BCLAF1-human ENCAB000AEH DNA see document see document False 2011-07-18 ENCODE 2 ENCFF477WUN, ENCFF750MIM 210289059 ENCODE Processing Pipeline f5cada0098d8e886b6d7e7aa2d80c960 https://www.encodeproject.org/files/ENCFF467UPX/@@download/ENCFF467UPX.bigWig hg19 released mixed read lengths, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample control insufficient read depth ENCFF565MZY bigWig fold change over control ENCSR000BKH ChIP-seq EFO:0002067 K562 cell line Homo sapiens BCLAF1-human ENCAB000AEH DNA see document see document False 2011-07-18 ENCODE 1 ENCFF144FIS, ENCFF750MIM 205775466 ENCODE Processing Pipeline a6e883091d38f473297b97d10617ee4d https://www.encodeproject.org/files/ENCFF565MZY/@@download/ENCFF565MZY.bigWig hg19 released mixed read lengths, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample control insufficient read depth ENCFF674BPH bed narrowPeak peaks ENCSR000BKH ChIP-seq EFO:0002067 K562 cell line Homo sapiens BCLAF1-human ENCAB000AEH DNA see document see document False 2011-07-18 ENCODE 1 ENCFF144FIS, ENCFF750MIM 755262 ENCODE Processing Pipeline 0dd0eeeb0b8df3d7fc9612b201349848 https://www.encodeproject.org/files/ENCFF674BPH/@@download/ENCFF674BPH.bed.gz hg19 released mixed read lengths, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample control insufficient read depth ENCFF650YKB bed narrowPeak peaks ENCSR000BKH ChIP-seq EFO:0002067 K562 cell line Homo sapiens BCLAF1-human ENCAB000AEH DNA see document see document False 2011-07-18 ENCODE 2 ENCFF477WUN, ENCFF750MIM 3690353 ENCODE Processing Pipeline d43b5690540dd71c1b9f817ded4a79c2 https://www.encodeproject.org/files/ENCFF650YKB/@@download/ENCFF650YKB.bed.gz hg19 released mixed read lengths, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample control insufficient read depth ENCFF203EDM bed narrowPeak optimal idr thresholded peaks ENCSR000BKH ChIP-seq EFO:0002067 K562 cell line Homo sapiens BCLAF1-human ENCAB000AEH DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF001TDO, ENCFF185HLZ, ENCFF650YKB, ENCFF674BPH 40925 ENCODE Processing Pipeline 3946dde3684d502243421593940f2481 https://www.encodeproject.org/files/ENCFF203EDM/@@download/ENCFF203EDM.bed.gz hg19 released mixed read lengths, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample control insufficient read depth ENCFF064TZP bigBed narrowPeak optimal idr thresholded peaks ENCSR000BKH ChIP-seq EFO:0002067 K562 cell line Homo sapiens BCLAF1-human ENCAB000AEH DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF203EDM 138965 ENCODE Processing Pipeline 502e3f56d69302cf4942e08d4371794b https://www.encodeproject.org/files/ENCFF064TZP/@@download/ENCFF064TZP.bigBed hg19 released mixed read lengths, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample control insufficient read depth ENCFF797PZA bigWig signal p-value ENCSR000BKH ChIP-seq EFO:0002067 K562 cell line Homo sapiens BCLAF1-human ENCAB000AEH DNA see document see document False 2011-07-18 ENCODE 2 ENCFF554KEG, ENCFF772PJM 210187967 ENCODE Processing Pipeline a66ec8fedbc253795b5439026c71137a https://www.encodeproject.org/files/ENCFF797PZA/@@download/ENCFF797PZA.bigWig GRCh38 released mixed read lengths, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample control insufficient read depth ENCFF875ZJG bigBed narrowPeak optimal idr thresholded peaks ENCSR000BKH ChIP-seq EFO:0002067 K562 cell line Homo sapiens BCLAF1-human ENCAB000AEH DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF496YJC 137578 ENCODE Processing Pipeline 0dac1daf7ff1740cf66c6bff33d52ae3 https://www.encodeproject.org/files/ENCFF875ZJG/@@download/ENCFF875ZJG.bigBed GRCh38 released mixed read lengths, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample control insufficient read depth ENCFF877MYD bigWig signal p-value ENCSR000BKH ChIP-seq EFO:0002067 K562 cell line Homo sapiens BCLAF1-human ENCAB000AEH DNA see document see document False 2011-07-18 ENCODE 1 ENCFF339YBR, ENCFF772PJM 208396701 ENCODE Processing Pipeline bcf8206d1e148f5b314cd703272a40f1 https://www.encodeproject.org/files/ENCFF877MYD/@@download/ENCFF877MYD.bigWig GRCh38 released mixed read lengths, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample control insufficient read depth ENCFF922MWD bigWig signal p-value ENCSR000BKH ChIP-seq EFO:0002067 K562 cell line Homo sapiens BCLAF1-human ENCAB000AEH DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF339YBR, ENCFF554KEG, ENCFF772PJM 202492824 ENCODE Processing Pipeline a2cda7c36aada0382889700b65abbe23 https://www.encodeproject.org/files/ENCFF922MWD/@@download/ENCFF922MWD.bigWig GRCh38 released mixed read lengths, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample control insufficient read depth ENCFF228NGU bigWig fold change over control ENCSR000BKH ChIP-seq EFO:0002067 K562 cell line Homo sapiens BCLAF1-human ENCAB000AEH DNA see document see document False 2011-07-18 ENCODE 1 ENCFF339YBR, ENCFF772PJM 204719857 ENCODE Processing Pipeline ce5b36b2fd0b4c4cc093386fbf212d7f https://www.encodeproject.org/files/ENCFF228NGU/@@download/ENCFF228NGU.bigWig GRCh38 released mixed read lengths, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample control insufficient read depth ENCFF193PRL bigWig fold change over control ENCSR000BKH ChIP-seq EFO:0002067 K562 cell line Homo sapiens BCLAF1-human ENCAB000AEH DNA see document see document False 2011-07-18 ENCODE 2 ENCFF554KEG, ENCFF772PJM 197217602 ENCODE Processing Pipeline bbb2f866c40001674485ca04893371e8 https://www.encodeproject.org/files/ENCFF193PRL/@@download/ENCFF193PRL.bigWig GRCh38 released mixed read lengths, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample control insufficient read depth ENCFF240CAY bigWig fold change over control ENCSR000BKH ChIP-seq EFO:0002067 K562 cell line Homo sapiens BCLAF1-human ENCAB000AEH DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF339YBR, ENCFF554KEG, ENCFF772PJM 354079504 ENCODE Processing Pipeline e0a1495b77b49a85b8bfe39616b31494 https://www.encodeproject.org/files/ENCFF240CAY/@@download/ENCFF240CAY.bigWig GRCh38 released mixed read lengths, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample control insufficient read depth ENCFF021MAG bed narrowPeak peaks ENCSR000BKH ChIP-seq EFO:0002067 K562 cell line Homo sapiens BCLAF1-human ENCAB000AEH DNA see document see document False 2011-07-18 ENCODE 1 ENCFF339YBR, ENCFF772PJM 740067 ENCODE Processing Pipeline 1868d284f096224a23cac87210ff9ae3 https://www.encodeproject.org/files/ENCFF021MAG/@@download/ENCFF021MAG.bed.gz GRCh38 released mixed read lengths, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample control insufficient read depth ENCFF569NCI bed narrowPeak peaks ENCSR000BKH ChIP-seq EFO:0002067 K562 cell line Homo sapiens BCLAF1-human ENCAB000AEH DNA see document see document False 2011-07-18 ENCODE 2 ENCFF554KEG, ENCFF772PJM 3688898 ENCODE Processing Pipeline aeaf21a2c7cabb34d3867058626708c2 https://www.encodeproject.org/files/ENCFF569NCI/@@download/ENCFF569NCI.bed.gz GRCh38 released mixed read lengths, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample control insufficient read depth ENCFF973HTC bed narrowPeak peaks ENCSR000BKH ChIP-seq EFO:0002067 K562 cell line Homo sapiens BCLAF1-human ENCAB000AEH DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF339YBR, ENCFF554KEG, ENCFF772PJM 4902942 ENCODE Processing Pipeline b88af5fd25ed5478d6473a9d08af76e3 https://www.encodeproject.org/files/ENCFF973HTC/@@download/ENCFF973HTC.bed.gz GRCh38 released mixed read lengths, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample control insufficient read depth ENCFF656ZAC bigBed narrowPeak peaks ENCSR000BKH ChIP-seq EFO:0002067 K562 cell line Homo sapiens BCLAF1-human ENCAB000AEH DNA see document see document False 2011-07-18 ENCODE 1 ENCFF021MAG 1605825 ENCODE Processing Pipeline 572b3063710e8d84cb2fd87d6ed8f057 https://www.encodeproject.org/files/ENCFF656ZAC/@@download/ENCFF656ZAC.bigBed GRCh38 released mixed read lengths, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample control insufficient read depth ENCFF895JIJ bigBed narrowPeak peaks ENCSR000BKH ChIP-seq EFO:0002067 K562 cell line Homo sapiens BCLAF1-human ENCAB000AEH DNA see document see document False 2011-07-18 ENCODE 2 ENCFF569NCI 7370051 ENCODE Processing Pipeline e2e58cf1363431fba69b8fbfba332d61 https://www.encodeproject.org/files/ENCFF895JIJ/@@download/ENCFF895JIJ.bigBed GRCh38 released mixed read lengths, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample control insufficient read depth ENCFF975KML bigBed narrowPeak peaks ENCSR000BKH ChIP-seq EFO:0002067 K562 cell line Homo sapiens BCLAF1-human ENCAB000AEH DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF973HTC 10475428 ENCODE Processing Pipeline 285285daf76357434cb9f21b32495f78 https://www.encodeproject.org/files/ENCFF975KML/@@download/ENCFF975KML.bigBed GRCh38 released mixed read lengths, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample control insufficient read depth ENCFF496YJC bed narrowPeak optimal idr thresholded peaks ENCSR000BKH ChIP-seq EFO:0002067 K562 cell line Homo sapiens BCLAF1-human ENCAB000AEH DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF021MAG, ENCFF419RSJ, ENCFF569NCI, ENCFF973HTC 39755 ENCODE Processing Pipeline f1fc3159c8dc7811416c2320108d41bb https://www.encodeproject.org/files/ENCFF496YJC/@@download/ENCFF496YJC.bed.gz GRCh38 released mixed read lengths, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample control insufficient read depth ENCFF000BZP bigBed broadPeak peaks ENCSR000ATJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC6-human ENCAB000AHK DNA see document see document False 2012-08-06 ENCODE ENCFF001SZR 3728480 Bradley Bernstein, Broad 212efe0f39ee5a1304c7397ff70770c3 https://www.encodeproject.org/files/ENCFF000BZP/@@download/ENCFF000BZP.bigBed hg19 archived borderline replicate concordance, inconsistent platforms, control low read depth, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length insufficient read depth ENCFF000BZO bam alignments ENCSR000ATJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC6-human ENCAB000AHK DNA see document see document False 2012-08-06 ENCODE 2 1 663133441 Bradley Bernstein, Broad 3bd1449434919c96ab51706092ae9fad https://www.encodeproject.org/files/ENCFF000BZO/@@download/ENCFF000BZO.bam hg19 archived borderline replicate concordance, inconsistent platforms, control low read depth, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length missing derived_from insufficient read depth ENCFF000BZQ bam alignments ENCSR000ATJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC6-human ENCAB000AHK DNA see document see document False 2012-08-06 ENCODE 1 1 1285571523 Bradley Bernstein, Broad e28fa6a80b3d27e2e5695efd43667de3 https://www.encodeproject.org/files/ENCFF000BZQ/@@download/ENCFF000BZQ.bam hg19 archived borderline replicate concordance, inconsistent platforms, control low read depth, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length missing derived_from insufficient read depth ENCFF000BZR bigWig signal ENCSR000ATJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC6-human ENCAB000AHK DNA see document see document False 2012-08-06 ENCODE 465312975 Bradley Bernstein, Broad f708d0aa96e82568fcd2257dcb8f806b https://www.encodeproject.org/files/ENCFF000BZR/@@download/ENCFF000BZR.bigWig hg19 archived borderline replicate concordance, inconsistent platforms, control low read depth, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length missing derived_from insufficient read depth ENCFF001SZR bed broadPeak peaks ENCSR000ATJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC6-human ENCAB000AHK DNA see document see document False 2012-08-06 ENCODE 2002488 Bradley Bernstein, Broad 983c9a47c9565d33539929dc62d94739 https://www.encodeproject.org/files/ENCFF001SZR/@@download/ENCFF001SZR.bed.gz hg19 archived borderline replicate concordance, inconsistent platforms, control low read depth, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length missing derived_from insufficient read depth ENCFF002CEP bed narrowPeak optimal idr thresholded peaks ENCSR000ATJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC6-human ENCAB000AHK DNA see document see document False 2012-08-06 ENCODE 28146 ENCODE Consortium Analysis Working Group 13bd20b1e3ab003e3db4cdced8b95873 https://www.encodeproject.org/files/ENCFF002CEP/@@download/ENCFF002CEP.bed.gz hg19 archived borderline replicate concordance, inconsistent platforms, control low read depth, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length missing derived_from insufficient read depth ENCFF917YDR bigBed narrowPeak optimal idr thresholded peaks ENCSR000ATJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC6-human ENCAB000AHK DNA see document see document False 2012-08-06 ENCODE ENCFF002CEP 132945 ENCODE Consortium 60d6a86e33092bf93094b7220e17203d https://www.encodeproject.org/files/ENCFF917YDR/@@download/ENCFF917YDR.bigBed hg19 archived borderline replicate concordance, inconsistent platforms, control low read depth, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length insufficient read depth ENCFF115AGC fastq reads ENCSR000ATJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC6-human ENCAB000AHK DNA see document see document False 2012-08-06 ENCODE 1 1 36 single-ended 1310255918 Bradley Bernstein, Broad 6c4154869fb3b724c8d2527b107d3e05 https://www.encodeproject.org/files/ENCFF115AGC/@@download/ENCFF115AGC.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000BWK/ released borderline replicate concordance, inconsistent platforms, control low read depth, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length insufficient read depth ENCFF991ROT fastq reads ENCSR000ATJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC6-human ENCAB000AHK DNA see document see document False 2012-08-06 ENCODE 2 1 36 single-ended 1272645011 Bradley Bernstein, Broad 6e66d1bc61e82138fccfb1a989406efe https://www.encodeproject.org/files/ENCFF991ROT/@@download/ENCFF991ROT.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF283HQV/, /files/ENCFF994FIB/ released borderline replicate concordance, inconsistent platforms, control low read depth, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length insufficient read depth ENCFF227CAY bam unfiltered alignments ENCSR000ATJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC6-human ENCAB000AHK DNA see document see document False 2012-08-06 ENCODE 2 36 ENCFF643CGH, ENCFF991ROT 1515780063 ENCODE Processing Pipeline 38671fb53b0b507f3717b3a7986cdf8c https://www.encodeproject.org/files/ENCFF227CAY/@@download/ENCFF227CAY.bam GRCh38 released borderline replicate concordance, inconsistent platforms, control low read depth, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length insufficient read depth ENCFF422HPM bam alignments ENCSR000ATJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC6-human ENCAB000AHK DNA see document see document False 2012-08-06 ENCODE 1 36 ENCFF115AGC, ENCFF807MUK 796949069 ENCODE Processing Pipeline 14c776b194dc9faa1c6bf0c64451c4f7 https://www.encodeproject.org/files/ENCFF422HPM/@@download/ENCFF422HPM.bam hg19 released borderline replicate concordance, inconsistent platforms, control low read depth, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length insufficient read depth ENCFF566ZFX bam unfiltered alignments ENCSR000ATJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC6-human ENCAB000AHK DNA see document see document False 2012-08-06 ENCODE 1 36 ENCFF115AGC, ENCFF643CGH 1697170308 ENCODE Processing Pipeline d71ca181430f4c9e872ce79a15eacb18 https://www.encodeproject.org/files/ENCFF566ZFX/@@download/ENCFF566ZFX.bam GRCh38 released borderline replicate concordance, inconsistent platforms, control low read depth, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length insufficient read depth ENCFF265FQY bam unfiltered alignments ENCSR000ATJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC6-human ENCAB000AHK DNA see document see document False 2012-08-06 ENCODE 2 36 ENCFF807MUK, ENCFF991ROT 1510832336 ENCODE Processing Pipeline f887fb5ee65ee9bc4a0542265fb84d4c https://www.encodeproject.org/files/ENCFF265FQY/@@download/ENCFF265FQY.bam hg19 released borderline replicate concordance, inconsistent platforms, control low read depth, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length insufficient read depth ENCFF392VDD bam alignments ENCSR000ATJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC6-human ENCAB000AHK DNA see document see document False 2012-08-06 ENCODE 2 36 ENCFF807MUK, ENCFF991ROT 400863879 ENCODE Processing Pipeline fdaaedca0176909b0ecefd03c3873946 https://www.encodeproject.org/files/ENCFF392VDD/@@download/ENCFF392VDD.bam hg19 released borderline replicate concordance, inconsistent platforms, control low read depth, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length insufficient read depth ENCFF347XSM bam unfiltered alignments ENCSR000ATJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC6-human ENCAB000AHK DNA see document see document False 2012-08-06 ENCODE 1 36 ENCFF115AGC, ENCFF807MUK 1688474968 ENCODE Processing Pipeline 24b7b0448f14a3812c46239e5be14918 https://www.encodeproject.org/files/ENCFF347XSM/@@download/ENCFF347XSM.bam hg19 released borderline replicate concordance, inconsistent platforms, control low read depth, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length insufficient read depth ENCFF213CZL bam alignments ENCSR000ATJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC6-human ENCAB000AHK DNA see document see document False 2012-08-06 ENCODE 2 36 ENCFF643CGH, ENCFF991ROT 400550110 ENCODE Processing Pipeline 18869a0c9319b42dadf5a05e4286e24b https://www.encodeproject.org/files/ENCFF213CZL/@@download/ENCFF213CZL.bam GRCh38 released borderline replicate concordance, inconsistent platforms, control low read depth, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length insufficient read depth ENCFF428XVO bam alignments ENCSR000ATJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC6-human ENCAB000AHK DNA see document see document False 2012-08-06 ENCODE 1 36 ENCFF115AGC, ENCFF643CGH 796346833 ENCODE Processing Pipeline 8673bf24241aed24a21ccd2ad55d9365 https://www.encodeproject.org/files/ENCFF428XVO/@@download/ENCFF428XVO.bam GRCh38 released borderline replicate concordance, inconsistent platforms, control low read depth, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length insufficient read depth ENCFF785SDP bigWig signal p-value ENCSR000ATJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC6-human ENCAB000AHK DNA see document see document False 2012-08-06 ENCODE 1 ENCFF245PJA, ENCFF422HPM, ENCFF574XYY 488423571 ENCODE Processing Pipeline 5b95b4abc2079c370be42a43ec9543a7 https://www.encodeproject.org/files/ENCFF785SDP/@@download/ENCFF785SDP.bigWig hg19 released borderline replicate concordance, inconsistent platforms, control low read depth, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length insufficient read depth ENCFF003RDX bigWig signal p-value ENCSR000ATJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC6-human ENCAB000AHK DNA see document see document False 2012-08-06 ENCODE 2 ENCFF245PJA, ENCFF392VDD 284219524 ENCODE Processing Pipeline bdb3e97c8d51638fdb6346a07b0b7d2a https://www.encodeproject.org/files/ENCFF003RDX/@@download/ENCFF003RDX.bigWig hg19 released borderline replicate concordance, inconsistent platforms, control low read depth, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length insufficient read depth ENCFF257IFT bigBed narrowPeak peaks ENCSR000ATJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC6-human ENCAB000AHK DNA see document see document False 2012-08-06 ENCODE 2 ENCFF996VOF 7878730 ENCODE Processing Pipeline 57da688717ea35e593dfcd2df8a7cc34 https://www.encodeproject.org/files/ENCFF257IFT/@@download/ENCFF257IFT.bigBed hg19 released borderline replicate concordance, inconsistent platforms, control low read depth, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length insufficient read depth ENCFF244TBN bigWig signal p-value ENCSR000ATJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC6-human ENCAB000AHK DNA see document see document False 2012-08-06 ENCODE 1 ENCFF392XRJ, ENCFF428XVO, ENCFF829HZY 457992344 ENCODE Processing Pipeline 7004b6f0610995e2a53fe2f17326e4d2 https://www.encodeproject.org/files/ENCFF244TBN/@@download/ENCFF244TBN.bigWig GRCh38 released borderline replicate concordance, inconsistent platforms, control low read depth, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length insufficient read depth ENCFF057OAB bed narrowPeak peaks ENCSR000ATJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC6-human ENCAB000AHK DNA see document see document False 2012-08-06 ENCODE 1 ENCFF392XRJ, ENCFF428XVO, ENCFF829HZY 4204873 ENCODE Processing Pipeline 328d3274d279df5305dcd31d96932272 https://www.encodeproject.org/files/ENCFF057OAB/@@download/ENCFF057OAB.bed.gz GRCh38 released borderline replicate concordance, inconsistent platforms, control low read depth, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length insufficient read depth ENCFF187WZF bigWig fold change over control ENCSR000ATJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC6-human ENCAB000AHK DNA see document see document False 2012-08-06 ENCODE 1 ENCFF245PJA, ENCFF422HPM, ENCFF574XYY 410257855 ENCODE Processing Pipeline 8cafa7b122cc91bf9e089a646f11688a https://www.encodeproject.org/files/ENCFF187WZF/@@download/ENCFF187WZF.bigWig hg19 released borderline replicate concordance, inconsistent platforms, control low read depth, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length insufficient read depth ENCFF196IUZ bigBed narrowPeak optimal idr thresholded peaks ENCSR000ATJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC6-human ENCAB000AHK DNA see document see document False 2012-08-06 ENCODE 1, 2 ENCFF998HOR 120412 ENCODE Processing Pipeline 9716e8e2d13706cfd82d2ff34cf4b48c https://www.encodeproject.org/files/ENCFF196IUZ/@@download/ENCFF196IUZ.bigBed hg19 released borderline replicate concordance, inconsistent platforms, control low read depth, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length insufficient read depth ENCFF263JIW bigWig fold change over control ENCSR000ATJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC6-human ENCAB000AHK DNA see document see document False 2012-08-06 ENCODE 1 ENCFF392XRJ, ENCFF428XVO, ENCFF829HZY 409558378 ENCODE Processing Pipeline d05ac37ebaf2ce4f0417fe7948395608 https://www.encodeproject.org/files/ENCFF263JIW/@@download/ENCFF263JIW.bigWig GRCh38 released borderline replicate concordance, inconsistent platforms, control low read depth, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length insufficient read depth ENCFF960CSX bigBed narrowPeak conservative idr thresholded peaks ENCSR000ATJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC6-human ENCAB000AHK DNA see document see document False 2012-08-06 ENCODE 1, 2 ENCFF669QKC 75910 ENCODE Processing Pipeline e1cd9dbf5352cea5adf33d4dd2f75def https://www.encodeproject.org/files/ENCFF960CSX/@@download/ENCFF960CSX.bigBed GRCh38 released borderline replicate concordance, inconsistent platforms, control low read depth, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length insufficient read depth ENCFF177KCK bigWig fold change over control ENCSR000ATJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC6-human ENCAB000AHK DNA see document see document False 2012-08-06 ENCODE 1, 2 ENCFF245PJA, ENCFF392VDD, ENCFF422HPM, ENCFF574XYY 559288318 ENCODE Processing Pipeline 2860eb13d8c328268cb538cf2c1e63da https://www.encodeproject.org/files/ENCFF177KCK/@@download/ENCFF177KCK.bigWig hg19 released borderline replicate concordance, inconsistent platforms, control low read depth, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length insufficient read depth ENCFF322OPC bed narrowPeak peaks ENCSR000ATJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC6-human ENCAB000AHK DNA see document see document False 2012-08-06 ENCODE 1 ENCFF245PJA, ENCFF422HPM, ENCFF574XYY 4336218 ENCODE Processing Pipeline 3580d942b4d0b3d698399cc018084638 https://www.encodeproject.org/files/ENCFF322OPC/@@download/ENCFF322OPC.bed.gz hg19 released borderline replicate concordance, inconsistent platforms, control low read depth, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length insufficient read depth ENCFF480PEW bed narrowPeak peaks ENCSR000ATJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC6-human ENCAB000AHK DNA see document see document False 2012-08-06 ENCODE 1, 2 ENCFF213CZL, ENCFF392XRJ, ENCFF428XVO, ENCFF829HZY 4977114 ENCODE Processing Pipeline 468e6e58a1c6c4a673f101c50770ff1f https://www.encodeproject.org/files/ENCFF480PEW/@@download/ENCFF480PEW.bed.gz GRCh38 released borderline replicate concordance, inconsistent platforms, control low read depth, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length insufficient read depth ENCFF997PQU bigWig fold change over control ENCSR000ATJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC6-human ENCAB000AHK DNA see document see document False 2012-08-06 ENCODE 2 ENCFF245PJA, ENCFF392VDD 180147942 ENCODE Processing Pipeline f525051960fe5ce3b29d7ecf01c961be https://www.encodeproject.org/files/ENCFF997PQU/@@download/ENCFF997PQU.bigWig hg19 released borderline replicate concordance, inconsistent platforms, control low read depth, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length insufficient read depth ENCFF996VOF bed narrowPeak peaks ENCSR000ATJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC6-human ENCAB000AHK DNA see document see document False 2012-08-06 ENCODE 2 ENCFF245PJA, ENCFF392VDD 3689177 ENCODE Processing Pipeline c9dd6ff51d059e1f979716b9efb805d9 https://www.encodeproject.org/files/ENCFF996VOF/@@download/ENCFF996VOF.bed.gz hg19 released borderline replicate concordance, inconsistent platforms, control low read depth, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length insufficient read depth ENCFF676RZD bed narrowPeak peaks ENCSR000ATJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC6-human ENCAB000AHK DNA see document see document False 2012-08-06 ENCODE 1, 2 ENCFF245PJA, ENCFF392VDD, ENCFF422HPM, ENCFF574XYY 5073702 ENCODE Processing Pipeline 2d696324ca493f3e066ce7f4a9dc1cce https://www.encodeproject.org/files/ENCFF676RZD/@@download/ENCFF676RZD.bed.gz hg19 released borderline replicate concordance, inconsistent platforms, control low read depth, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length insufficient read depth ENCFF391PFT bigBed narrowPeak peaks ENCSR000ATJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC6-human ENCAB000AHK DNA see document see document False 2012-08-06 ENCODE 1 ENCFF322OPC 10887036 ENCODE Processing Pipeline 8953e1185e3dcf00a843d87cb708b1f5 https://www.encodeproject.org/files/ENCFF391PFT/@@download/ENCFF391PFT.bigBed hg19 released borderline replicate concordance, inconsistent platforms, control low read depth, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length insufficient read depth ENCFF160BJC bigBed narrowPeak peaks ENCSR000ATJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC6-human ENCAB000AHK DNA see document see document False 2012-08-06 ENCODE 1, 2 ENCFF676RZD 11225650 ENCODE Processing Pipeline c532613ed081560f3b8e173ee0a1b5aa https://www.encodeproject.org/files/ENCFF160BJC/@@download/ENCFF160BJC.bigBed hg19 released borderline replicate concordance, inconsistent platforms, control low read depth, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length insufficient read depth ENCFF025HHM bed narrowPeak conservative idr thresholded peaks ENCSR000ATJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC6-human ENCAB000AHK DNA see document see document False 2012-08-06 ENCODE 1, 2 ENCFF001TDO, ENCFF322OPC, ENCFF676RZD, ENCFF996VOF 18045 ENCODE Processing Pipeline aa6d067088248069a5b0d3aad3cc622f https://www.encodeproject.org/files/ENCFF025HHM/@@download/ENCFF025HHM.bed.gz hg19 released borderline replicate concordance, inconsistent platforms, control low read depth, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length insufficient read depth ENCFF955AXH bigBed narrowPeak conservative idr thresholded peaks ENCSR000ATJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC6-human ENCAB000AHK DNA see document see document False 2012-08-06 ENCODE 1, 2 ENCFF025HHM 92597 ENCODE Processing Pipeline 30bf2ae9786e71d4da92cb56ea71bfd8 https://www.encodeproject.org/files/ENCFF955AXH/@@download/ENCFF955AXH.bigBed hg19 released borderline replicate concordance, inconsistent platforms, control low read depth, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length insufficient read depth ENCFF998HOR bed narrowPeak optimal idr thresholded peaks ENCSR000ATJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC6-human ENCAB000AHK DNA see document see document False 2012-08-06 ENCODE 1, 2 ENCFF001TDO, ENCFF322OPC, ENCFF676RZD, ENCFF996VOF 33412 ENCODE Processing Pipeline 7ae9a8cbf62137818bd83b824a2f16a5 https://www.encodeproject.org/files/ENCFF998HOR/@@download/ENCFF998HOR.bed.gz hg19 released borderline replicate concordance, inconsistent platforms, control low read depth, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length insufficient read depth ENCFF441RSZ bigWig signal p-value ENCSR000ATJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC6-human ENCAB000AHK DNA see document see document False 2012-08-06 ENCODE 2 ENCFF213CZL, ENCFF829HZY 309397814 ENCODE Processing Pipeline e292250ba0e23b9a0a9d4545af37f6d4 https://www.encodeproject.org/files/ENCFF441RSZ/@@download/ENCFF441RSZ.bigWig GRCh38 released borderline replicate concordance, inconsistent platforms, control low read depth, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length insufficient read depth ENCFF153PLB bigWig signal p-value ENCSR000ATJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC6-human ENCAB000AHK DNA see document see document False 2012-08-06 ENCODE 1, 2 ENCFF213CZL, ENCFF392XRJ, ENCFF428XVO, ENCFF829HZY 570500050 ENCODE Processing Pipeline 566a7b9129b3d2837e6c40e9662879cb https://www.encodeproject.org/files/ENCFF153PLB/@@download/ENCFF153PLB.bigWig GRCh38 released borderline replicate concordance, inconsistent platforms, control low read depth, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length insufficient read depth ENCFF274APB bigBed narrowPeak optimal idr thresholded peaks ENCSR000ATJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC6-human ENCAB000AHK DNA see document see document False 2012-08-06 ENCODE 1, 2 ENCFF295GBP 114747 ENCODE Processing Pipeline ee4ce9fb2f22635cae8c53d2a0dd7213 https://www.encodeproject.org/files/ENCFF274APB/@@download/ENCFF274APB.bigBed GRCh38 released borderline replicate concordance, inconsistent platforms, control low read depth, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length insufficient read depth ENCFF679ASU bigWig signal p-value ENCSR000ATJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC6-human ENCAB000AHK DNA see document see document False 2012-08-06 ENCODE 1, 2 ENCFF245PJA, ENCFF392VDD, ENCFF422HPM, ENCFF574XYY 648244710 ENCODE Processing Pipeline 5b31c27e6e57effdf44d4480d2f3a9d4 https://www.encodeproject.org/files/ENCFF679ASU/@@download/ENCFF679ASU.bigWig hg19 released borderline replicate concordance, inconsistent platforms, control low read depth, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length insufficient read depth ENCFF457BHF bigWig fold change over control ENCSR000ATJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC6-human ENCAB000AHK DNA see document see document False 2012-08-06 ENCODE 2 ENCFF213CZL, ENCFF829HZY 181079496 ENCODE Processing Pipeline dd699b7a2f40dc54d1ce79a41394a4bf https://www.encodeproject.org/files/ENCFF457BHF/@@download/ENCFF457BHF.bigWig GRCh38 released borderline replicate concordance, inconsistent platforms, control low read depth, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length insufficient read depth ENCFF178MEM bed narrowPeak peaks ENCSR000ATJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC6-human ENCAB000AHK DNA see document see document False 2012-08-06 ENCODE 2 ENCFF213CZL, ENCFF829HZY 3567059 ENCODE Processing Pipeline c0c61074ac70a3165051c4dce66b19a7 https://www.encodeproject.org/files/ENCFF178MEM/@@download/ENCFF178MEM.bed.gz GRCh38 released borderline replicate concordance, inconsistent platforms, control low read depth, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length insufficient read depth ENCFF255OTR bigBed narrowPeak peaks ENCSR000ATJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC6-human ENCAB000AHK DNA see document see document False 2012-08-06 ENCODE 1 ENCFF057OAB 10774509 ENCODE Processing Pipeline 346608820ed9334ca3fbccf9cd3ff336 https://www.encodeproject.org/files/ENCFF255OTR/@@download/ENCFF255OTR.bigBed GRCh38 released borderline replicate concordance, inconsistent platforms, control low read depth, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length insufficient read depth ENCFF896GKF bigWig fold change over control ENCSR000ATJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC6-human ENCAB000AHK DNA see document see document False 2012-08-06 ENCODE 1, 2 ENCFF213CZL, ENCFF392XRJ, ENCFF428XVO, ENCFF829HZY 548675987 ENCODE Processing Pipeline 1bf668d4d70d94c01e147f4636d9307a https://www.encodeproject.org/files/ENCFF896GKF/@@download/ENCFF896GKF.bigWig GRCh38 released borderline replicate concordance, inconsistent platforms, control low read depth, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length insufficient read depth ENCFF132JRI bigBed narrowPeak peaks ENCSR000ATJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC6-human ENCAB000AHK DNA see document see document False 2012-08-06 ENCODE 2 ENCFF178MEM 7539504 ENCODE Processing Pipeline 44e68d22babe40633d489d1716e9ea91 https://www.encodeproject.org/files/ENCFF132JRI/@@download/ENCFF132JRI.bigBed GRCh38 released borderline replicate concordance, inconsistent platforms, control low read depth, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length insufficient read depth ENCFF324IOT bigBed narrowPeak peaks ENCSR000ATJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC6-human ENCAB000AHK DNA see document see document False 2012-08-06 ENCODE 1, 2 ENCFF480PEW 11217249 ENCODE Processing Pipeline a281925cebbd8be39a1cac8894532204 https://www.encodeproject.org/files/ENCFF324IOT/@@download/ENCFF324IOT.bigBed GRCh38 released borderline replicate concordance, inconsistent platforms, control low read depth, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length insufficient read depth ENCFF669QKC bed narrowPeak conservative idr thresholded peaks ENCSR000ATJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC6-human ENCAB000AHK DNA see document see document False 2012-08-06 ENCODE 1, 2 ENCFF057OAB, ENCFF178MEM, ENCFF419RSJ, ENCFF480PEW 14214 ENCODE Processing Pipeline 1dcb8ef3234c911a9a0ed3f04ba67ecd https://www.encodeproject.org/files/ENCFF669QKC/@@download/ENCFF669QKC.bed.gz GRCh38 released borderline replicate concordance, inconsistent platforms, control low read depth, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length insufficient read depth ENCFF295GBP bed narrowPeak optimal idr thresholded peaks ENCSR000ATJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC6-human ENCAB000AHK DNA see document see document False 2012-08-06 ENCODE 1, 2 ENCFF057OAB, ENCFF178MEM, ENCFF419RSJ, ENCFF480PEW 28789 ENCODE Processing Pipeline 68bf42e1127e4d21380226156afcb00f https://www.encodeproject.org/files/ENCFF295GBP/@@download/ENCFF295GBP.bed.gz GRCh38 released borderline replicate concordance, inconsistent platforms, control low read depth, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length insufficient read depth ENCFF108ESB fastq reads ENCSR720HUL ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F1-human ENCAB357OHU DNA False 2018-01-26 ENCODE 1 1 100 paired-ended 2 ENCFF895VJN 2292752401 Michael Snyder, Stanford 0ab360c09155b2fd514ee2ec0199428e https://www.encodeproject.org/files/ENCFF108ESB/@@download/ENCFF108ESB.fastq.gz Illumina HiSeq 4000 /files/ENCFF502GTS/ released inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody, poor library complexity, severe bottlenecking ENCFF917BAA fastq reads ENCSR720HUL ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F1-human ENCAB357OHU DNA False 2018-01-26 ENCODE 2 1 100 paired-ended 2 ENCFF803CCE 2769046561 Michael Snyder, Stanford 38fa0d20fcc56f008e89493c27c6907e https://www.encodeproject.org/files/ENCFF917BAA/@@download/ENCFF917BAA.fastq.gz Illumina HiSeq 4000 /files/ENCFF837MIV/ released inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody, poor library complexity, severe bottlenecking ENCFF895VJN fastq reads ENCSR720HUL ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F1-human ENCAB357OHU DNA False 2018-01-26 ENCODE 1 1 100 paired-ended 1 ENCFF108ESB 2167477551 Michael Snyder, Stanford a7da081afe0cec7eb1f24831a1fe6d9f https://www.encodeproject.org/files/ENCFF895VJN/@@download/ENCFF895VJN.fastq.gz Illumina HiSeq 4000 /files/ENCFF498JMO/ released inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody, poor library complexity, severe bottlenecking ENCFF803CCE fastq reads ENCSR720HUL ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F1-human ENCAB357OHU DNA False 2018-01-26 ENCODE 2 1 100 paired-ended 1 ENCFF917BAA 2399945430 Michael Snyder, Stanford 949f5b144b317e8fc03f554f576b53c1 https://www.encodeproject.org/files/ENCFF803CCE/@@download/ENCFF803CCE.fastq.gz Illumina HiSeq 4000 /files/ENCFF259GQA/ released inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody, poor library complexity, severe bottlenecking ENCFF389WFJ bam unfiltered alignments ENCSR720HUL ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F1-human ENCAB357OHU DNA False 2018-01-26 ENCODE 2 100 ENCFF643CGH, ENCFF803CCE, ENCFF917BAA 4254401310 ENCODE Processing Pipeline a0eef9e45ea20e15714dc01e35d61ba3 https://www.encodeproject.org/files/ENCFF389WFJ/@@download/ENCFF389WFJ.bam GRCh38 released inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody, poor library complexity, severe bottlenecking ENCFF508JKO bam alignments ENCSR720HUL ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F1-human ENCAB357OHU DNA False 2018-01-26 ENCODE 2 100 ENCFF643CGH, ENCFF803CCE, ENCFF917BAA 1789971113 ENCODE Processing Pipeline 05e4cf55fd7c10bcb18240e5d22f0155 https://www.encodeproject.org/files/ENCFF508JKO/@@download/ENCFF508JKO.bam GRCh38 released inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody, poor library complexity, severe bottlenecking ENCFF467JSA bam unfiltered alignments ENCSR720HUL ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F1-human ENCAB357OHU DNA False 2018-01-26 ENCODE 1 100 ENCFF108ESB, ENCFF643CGH, ENCFF895VJN 4016726565 ENCODE Processing Pipeline 30624cd8614737d5cdd40c0b673671d7 https://www.encodeproject.org/files/ENCFF467JSA/@@download/ENCFF467JSA.bam GRCh38 released inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody, poor library complexity, severe bottlenecking ENCFF260TPL bam alignments ENCSR720HUL ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F1-human ENCAB357OHU DNA False 2018-01-26 ENCODE 1 100 ENCFF108ESB, ENCFF643CGH, ENCFF895VJN 2171384744 ENCODE Processing Pipeline 4ef35c6e0df53cf910fa94e5bdccf549 https://www.encodeproject.org/files/ENCFF260TPL/@@download/ENCFF260TPL.bam GRCh38 released inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody, poor library complexity, severe bottlenecking ENCFF841KTI bam alignments ENCSR720HUL ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F1-human ENCAB357OHU DNA False 2018-01-26 ENCODE 2 100 ENCFF803CCE, ENCFF807MUK, ENCFF917BAA 1788975295 ENCODE Processing Pipeline eb1761e761ed6026c547cfbd953a27da https://www.encodeproject.org/files/ENCFF841KTI/@@download/ENCFF841KTI.bam hg19 released inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody, poor library complexity, severe bottlenecking ENCFF911AAQ bam alignments ENCSR720HUL ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F1-human ENCAB357OHU DNA False 2018-01-26 ENCODE 1 100 ENCFF108ESB, ENCFF807MUK, ENCFF895VJN 2169983205 ENCODE Processing Pipeline 15b6f8b327b0fbf49a8231de09d6bcc2 https://www.encodeproject.org/files/ENCFF911AAQ/@@download/ENCFF911AAQ.bam hg19 released inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody, poor library complexity, severe bottlenecking ENCFF160MAF bam unfiltered alignments ENCSR720HUL ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F1-human ENCAB357OHU DNA False 2018-01-26 ENCODE 2 100 ENCFF803CCE, ENCFF807MUK, ENCFF917BAA 4258046310 ENCODE Processing Pipeline c90439fa0fe4cbaebae7bed0b82f6f6b https://www.encodeproject.org/files/ENCFF160MAF/@@download/ENCFF160MAF.bam hg19 released inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody, poor library complexity, severe bottlenecking ENCFF140VPY bam unfiltered alignments ENCSR720HUL ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F1-human ENCAB357OHU DNA False 2018-01-26 ENCODE 1 100 ENCFF108ESB, ENCFF807MUK, ENCFF895VJN 4017228955 ENCODE Processing Pipeline 6ffee28924de144c7286e6de42eb8038 https://www.encodeproject.org/files/ENCFF140VPY/@@download/ENCFF140VPY.bam hg19 released inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody, poor library complexity, severe bottlenecking ENCFF625EFW bigWig signal p-value ENCSR720HUL ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F1-human ENCAB357OHU DNA False 2018-01-26 ENCODE 1 ENCFF260TPL, ENCFF910IKB 899053070 ENCODE Processing Pipeline f9ce4a07d16560845f802d3ed5acc133 https://www.encodeproject.org/files/ENCFF625EFW/@@download/ENCFF625EFW.bigWig GRCh38 released inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody, poor library complexity, severe bottlenecking ENCFF377FIA bigWig signal p-value ENCSR720HUL ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F1-human ENCAB357OHU DNA False 2018-01-26 ENCODE 2 ENCFF227IZS, ENCFF508JKO 805826573 ENCODE Processing Pipeline 38ce2e1b6556afc1f556f10bb2da3f13 https://www.encodeproject.org/files/ENCFF377FIA/@@download/ENCFF377FIA.bigWig GRCh38 archived inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody, poor library complexity, severe bottlenecking ENCFF889TVL bigWig signal p-value ENCSR720HUL ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F1-human ENCAB357OHU DNA False 2018-01-26 ENCODE 1, 2 ENCFF227IZS, ENCFF260TPL, ENCFF508JKO, ENCFF910IKB 1464621796 ENCODE Processing Pipeline fafa8eb4bdd6f1af82c1733ee07aa9f1 https://www.encodeproject.org/files/ENCFF889TVL/@@download/ENCFF889TVL.bigWig GRCh38 archived inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody, poor library complexity, severe bottlenecking ENCFF228OTZ bigWig fold change over control ENCSR720HUL ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F1-human ENCAB357OHU DNA False 2018-01-26 ENCODE 1 ENCFF260TPL, ENCFF910IKB 901260879 ENCODE Processing Pipeline 76587eba8baee5f33e7f6003930c78d0 https://www.encodeproject.org/files/ENCFF228OTZ/@@download/ENCFF228OTZ.bigWig GRCh38 archived inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody, poor library complexity, severe bottlenecking ENCFF297BBY bed narrowPeak peaks ENCSR720HUL ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F1-human ENCAB357OHU DNA False 2018-01-26 ENCODE 1 ENCFF260TPL, ENCFF910IKB 6545880 ENCODE Processing Pipeline ecb3b774158a3ed4fa8f89be9ab1c0cf https://www.encodeproject.org/files/ENCFF297BBY/@@download/ENCFF297BBY.bed.gz GRCh38 archived inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody, poor library complexity, severe bottlenecking ENCFF217TTM bigBed narrowPeak peaks ENCSR720HUL ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F1-human ENCAB357OHU DNA False 2018-01-26 ENCODE 2 ENCFF968SJR 13276912 ENCODE Processing Pipeline 2ddaee3680ba55e25b7b8d4e3c0d4fc9 https://www.encodeproject.org/files/ENCFF217TTM/@@download/ENCFF217TTM.bigBed GRCh38 archived inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody, poor library complexity, severe bottlenecking ENCFF948EFF bed narrowPeak optimal idr thresholded peaks ENCSR720HUL ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F1-human ENCAB357OHU DNA False 2018-01-26 ENCODE 1, 2 ENCFF297BBY, ENCFF419RSJ, ENCFF772VMB, ENCFF968SJR 443840 ENCODE Processing Pipeline b91e029e0c17876d30a37a7a6a8e4ae8 https://www.encodeproject.org/files/ENCFF948EFF/@@download/ENCFF948EFF.bed.gz GRCh38 archived inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody, poor library complexity, severe bottlenecking ENCFF582WRU bigWig fold change over control ENCSR720HUL ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F1-human ENCAB357OHU DNA False 2018-01-26 ENCODE 1, 2 ENCFF227IZS, ENCFF260TPL, ENCFF508JKO, ENCFF910IKB 1692562072 ENCODE Processing Pipeline 2340c727b68179092311ed2eb4aa1a15 https://www.encodeproject.org/files/ENCFF582WRU/@@download/ENCFF582WRU.bigWig GRCh38 archived inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody, poor library complexity, severe bottlenecking ENCFF008MHU bed narrowPeak conservative idr thresholded peaks ENCSR720HUL ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F1-human ENCAB357OHU DNA False 2018-01-26 ENCODE 1, 2 ENCFF297BBY, ENCFF419RSJ, ENCFF772VMB, ENCFF968SJR 378702 ENCODE Processing Pipeline 2b662e23fae0b1785e64ef798df9df47 https://www.encodeproject.org/files/ENCFF008MHU/@@download/ENCFF008MHU.bed.gz GRCh38 archived inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody, poor library complexity, severe bottlenecking ENCFF850FFL bigWig fold change over control ENCSR720HUL ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F1-human ENCAB357OHU DNA False 2018-01-26 ENCODE 2 ENCFF227IZS, ENCFF508JKO 804286665 ENCODE Processing Pipeline 173eedf171cdb2c32906ea680450dd88 https://www.encodeproject.org/files/ENCFF850FFL/@@download/ENCFF850FFL.bigWig GRCh38 archived inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody, poor library complexity, severe bottlenecking ENCFF968SJR bed narrowPeak peaks ENCSR720HUL ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F1-human ENCAB357OHU DNA False 2018-01-26 ENCODE 2 ENCFF227IZS, ENCFF508JKO 6530864 ENCODE Processing Pipeline e60cf973255237ad6f389e8936f6ae95 https://www.encodeproject.org/files/ENCFF968SJR/@@download/ENCFF968SJR.bed.gz GRCh38 archived inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody, poor library complexity, severe bottlenecking ENCFF772VMB bed narrowPeak peaks ENCSR720HUL ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F1-human ENCAB357OHU DNA False 2018-01-26 ENCODE 1, 2 ENCFF227IZS, ENCFF260TPL, ENCFF508JKO, ENCFF910IKB 7114056 ENCODE Processing Pipeline 749724467041e27955ce2f5abcf7286d https://www.encodeproject.org/files/ENCFF772VMB/@@download/ENCFF772VMB.bed.gz GRCh38 archived inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody, poor library complexity, severe bottlenecking ENCFF652MWU bigBed narrowPeak peaks ENCSR720HUL ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F1-human ENCAB357OHU DNA False 2018-01-26 ENCODE 1 ENCFF297BBY 13258508 ENCODE Processing Pipeline 6049adacc147f05224b4b9d3988ca1fa https://www.encodeproject.org/files/ENCFF652MWU/@@download/ENCFF652MWU.bigBed GRCh38 archived inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody, poor library complexity, severe bottlenecking ENCFF440AYR bigBed narrowPeak peaks ENCSR720HUL ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F1-human ENCAB357OHU DNA False 2018-01-26 ENCODE 1, 2 ENCFF772VMB 13150395 ENCODE Processing Pipeline 89cdf4f9e3eeac0300a6a578de3d9368 https://www.encodeproject.org/files/ENCFF440AYR/@@download/ENCFF440AYR.bigBed GRCh38 archived inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody, poor library complexity, severe bottlenecking ENCFF049XLD bigBed narrowPeak conservative idr thresholded peaks ENCSR720HUL ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F1-human ENCAB357OHU DNA False 2018-01-26 ENCODE 1, 2 ENCFF008MHU 824792 ENCODE Processing Pipeline 4fe7ec96221dd6c1620e18e0a2e81f0c https://www.encodeproject.org/files/ENCFF049XLD/@@download/ENCFF049XLD.bigBed GRCh38 archived inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody, poor library complexity, severe bottlenecking ENCFF110XQH bigBed narrowPeak optimal idr thresholded peaks ENCSR720HUL ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F1-human ENCAB357OHU DNA False 2018-01-26 ENCODE 1, 2 ENCFF948EFF 928078 ENCODE Processing Pipeline b16dfadda592aad2fde7d2c607f94735 https://www.encodeproject.org/files/ENCFF110XQH/@@download/ENCFF110XQH.bigBed GRCh38 archived inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody, poor library complexity, severe bottlenecking ENCFF668IYO bigBed narrowPeak peaks ENCSR720HUL ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F1-human ENCAB357OHU DNA False 2018-01-26 ENCODE 2 ENCFF358UWQ 13080164 ENCODE Processing Pipeline feb415e2fb649108bbed81d4237ee8e2 https://www.encodeproject.org/files/ENCFF668IYO/@@download/ENCFF668IYO.bigBed hg19 archived inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody, poor library complexity, severe bottlenecking ENCFF153RYT bam unfiltered alignments ENCSR720HUL ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F1-human ENCAB357OHU DNA False 2018-01-26 ENCODE 2 100 ENCFF132KBU, ENCFF735BSJ, ENCFF807MUK 2152108007 ENCODE Processing Pipeline c1eb708bca609426aea41305a64e547a https://www.encodeproject.org/files/ENCFF153RYT/@@download/ENCFF153RYT.bam hg19 archived inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody, poor library complexity, severe bottlenecking ENCFF624XXH bigBed narrowPeak peaks ENCSR720HUL ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F1-human ENCAB357OHU DNA False 2018-01-26 ENCODE 1 ENCFF230XQX 13181232 ENCODE Processing Pipeline 3bd64af73090f5400413ec5bc607fc84 https://www.encodeproject.org/files/ENCFF624XXH/@@download/ENCFF624XXH.bigBed GRCh38 archived inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody, poor library complexity, severe bottlenecking ENCFF567YTM bed narrowPeak peaks ENCSR720HUL ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F1-human ENCAB357OHU DNA False 2018-01-26 ENCODE 2 ENCFF227IZS, ENCFF972SUH 5979041 ENCODE Processing Pipeline 204ab26c8a76d7322c8ccf161f55f6ea https://www.encodeproject.org/files/ENCFF567YTM/@@download/ENCFF567YTM.bed.gz GRCh38 archived inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody, poor library complexity, severe bottlenecking ENCFF753THE bigWig signal p-value ENCSR720HUL ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F1-human ENCAB357OHU DNA False 2018-01-26 ENCODE 1 ENCFF648RLH, ENCFF910IKB 797957458 ENCODE Processing Pipeline 485d07328a55a22dc32716a1dbc62e5a https://www.encodeproject.org/files/ENCFF753THE/@@download/ENCFF753THE.bigWig GRCh38 archived inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody, poor library complexity, severe bottlenecking ENCFF648RLH bam alignments ENCSR720HUL ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F1-human ENCAB357OHU DNA False 2018-01-26 ENCODE 1 100 ENCFF643CGH, ENCFF921OKO, ENCFF944WBR 1589571144 ENCODE Processing Pipeline 5398d3ee37c21af2a07836b5c23a4fdc https://www.encodeproject.org/files/ENCFF648RLH/@@download/ENCFF648RLH.bam GRCh38 archived inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody, poor library complexity, severe bottlenecking ENCFF921OKO fastq reads ENCSR720HUL ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F1-human ENCAB357OHU DNA False 2018-01-26 ENCODE 1 1 100 paired-ended 2 ENCFF944WBR 1065646216 Michael Snyder, Stanford 4bda61858651fe91f6b8ecf3a997cbb9 https://www.encodeproject.org/files/ENCFF921OKO/@@download/ENCFF921OKO.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFH/ archived inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody, poor library complexity, severe bottlenecking ENCFF739WRB bigBed narrowPeak optimal idr thresholded peaks ENCSR720HUL ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F1-human ENCAB357OHU DNA False 2018-01-26 ENCODE 1, 2 ENCFF352HGW 778885 ENCODE Processing Pipeline 2eac33c6abe7066ef4d255bedd7d1faf https://www.encodeproject.org/files/ENCFF739WRB/@@download/ENCFF739WRB.bigBed hg19 archived inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody, poor library complexity, severe bottlenecking ENCFF352HGW bed narrowPeak optimal idr thresholded peaks ENCSR720HUL ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F1-human ENCAB357OHU DNA False 2018-01-26 ENCODE 1, 2 ENCFF001TDO, ENCFF252JHJ, ENCFF358UWQ, ENCFF401MRM 359284 ENCODE Processing Pipeline e24abce2eb93185b8fab54ab59d5f784 https://www.encodeproject.org/files/ENCFF352HGW/@@download/ENCFF352HGW.bed.gz hg19 archived inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody, poor library complexity, severe bottlenecking ENCFF010GOB bigBed narrowPeak conservative idr thresholded peaks ENCSR720HUL ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F1-human ENCAB357OHU DNA False 2018-01-26 ENCODE 1, 2 ENCFF666FOX 684722 ENCODE Processing Pipeline 2cc9f4565e8e91d9879f202b4bd20d2d https://www.encodeproject.org/files/ENCFF010GOB/@@download/ENCFF010GOB.bigBed hg19 archived inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody, poor library complexity, severe bottlenecking ENCFF666FOX bed narrowPeak conservative idr thresholded peaks ENCSR720HUL ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F1-human ENCAB357OHU DNA False 2018-01-26 ENCODE 1, 2 ENCFF001TDO, ENCFF252JHJ, ENCFF358UWQ, ENCFF401MRM 301236 ENCODE Processing Pipeline 0181207574d73e6300a080476e8136b2 https://www.encodeproject.org/files/ENCFF666FOX/@@download/ENCFF666FOX.bed.gz hg19 archived inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody, poor library complexity, severe bottlenecking ENCFF440HAH bigBed narrowPeak peaks ENCSR720HUL ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F1-human ENCAB357OHU DNA False 2018-01-26 ENCODE 1, 2 ENCFF401MRM 13181715 ENCODE Processing Pipeline ac12845f91c7dc3fcc9dfc4a790427de https://www.encodeproject.org/files/ENCFF440HAH/@@download/ENCFF440HAH.bigBed hg19 archived inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody, poor library complexity, severe bottlenecking ENCFF109IHM bigBed narrowPeak peaks ENCSR720HUL ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F1-human ENCAB357OHU DNA False 2018-01-26 ENCODE 1 ENCFF252JHJ 13175336 ENCODE Processing Pipeline 18bc02afebc8a85c748c01236aa72908 https://www.encodeproject.org/files/ENCFF109IHM/@@download/ENCFF109IHM.bigBed hg19 archived inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody, poor library complexity, severe bottlenecking ENCFF401MRM bed narrowPeak peaks ENCSR720HUL ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F1-human ENCAB357OHU DNA False 2018-01-26 ENCODE 1, 2 ENCFF024YPR, ENCFF051LWI, ENCFF581ZJL, ENCFF970IIN 6881000 ENCODE Processing Pipeline ac8d8aeb5f2e86a57f15e917cc5ca947 https://www.encodeproject.org/files/ENCFF401MRM/@@download/ENCFF401MRM.bed.gz hg19 archived inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody, poor library complexity, severe bottlenecking ENCFF358UWQ bed narrowPeak peaks ENCSR720HUL ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F1-human ENCAB357OHU DNA False 2018-01-26 ENCODE 2 ENCFF024YPR, ENCFF051LWI 5981773 ENCODE Processing Pipeline ca1bc3fdc58e3c336e9dd1a26d572ffe https://www.encodeproject.org/files/ENCFF358UWQ/@@download/ENCFF358UWQ.bed.gz hg19 archived inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody, poor library complexity, severe bottlenecking ENCFF252JHJ bed narrowPeak peaks ENCSR720HUL ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F1-human ENCAB357OHU DNA False 2018-01-26 ENCODE 1 ENCFF581ZJL, ENCFF970IIN 6123031 ENCODE Processing Pipeline 723d9629d91b43ddfa993933a6ac000a https://www.encodeproject.org/files/ENCFF252JHJ/@@download/ENCFF252JHJ.bed.gz hg19 archived inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody, poor library complexity, severe bottlenecking ENCFF597TLR bigWig fold change over control ENCSR720HUL ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F1-human ENCAB357OHU DNA False 2018-01-26 ENCODE 1, 2 ENCFF024YPR, ENCFF051LWI, ENCFF581ZJL, ENCFF970IIN 1382378463 ENCODE Processing Pipeline 089438af0b864c5f289636ca2cfa4bf6 https://www.encodeproject.org/files/ENCFF597TLR/@@download/ENCFF597TLR.bigWig hg19 archived inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody, poor library complexity, severe bottlenecking ENCFF504KWN bigWig fold change over control ENCSR720HUL ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F1-human ENCAB357OHU DNA False 2018-01-26 ENCODE 2 ENCFF024YPR, ENCFF051LWI 613504474 ENCODE Processing Pipeline 2c51a4293a81ceb10e5ebe20b07d4ee8 https://www.encodeproject.org/files/ENCFF504KWN/@@download/ENCFF504KWN.bigWig hg19 archived inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody, poor library complexity, severe bottlenecking ENCFF384CNQ bigWig fold change over control ENCSR720HUL ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F1-human ENCAB357OHU DNA False 2018-01-26 ENCODE 1 ENCFF581ZJL, ENCFF970IIN 697991030 ENCODE Processing Pipeline 641d5e11651f48ecd87f1f94efc45f88 https://www.encodeproject.org/files/ENCFF384CNQ/@@download/ENCFF384CNQ.bigWig hg19 archived inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody, poor library complexity, severe bottlenecking ENCFF082YJG bigWig signal p-value ENCSR720HUL ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F1-human ENCAB357OHU DNA False 2018-01-26 ENCODE 1, 2 ENCFF024YPR, ENCFF051LWI, ENCFF581ZJL, ENCFF970IIN 1386561769 ENCODE Processing Pipeline 599f66f2583b0e26d2377186dfaae925 https://www.encodeproject.org/files/ENCFF082YJG/@@download/ENCFF082YJG.bigWig hg19 archived inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody, poor library complexity, severe bottlenecking ENCFF400URY bigWig signal p-value ENCSR720HUL ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F1-human ENCAB357OHU DNA False 2018-01-26 ENCODE 2 ENCFF024YPR, ENCFF051LWI 782580027 ENCODE Processing Pipeline 966ccad66e54cc0908ee8b8ddcf0af67 https://www.encodeproject.org/files/ENCFF400URY/@@download/ENCFF400URY.bigWig hg19 archived inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody, poor library complexity, severe bottlenecking ENCFF214HFR bigWig signal p-value ENCSR720HUL ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F1-human ENCAB357OHU DNA False 2018-01-26 ENCODE 1 ENCFF581ZJL, ENCFF970IIN 885082823 ENCODE Processing Pipeline 2d961e64dddd73b32c97a7616e230778 https://www.encodeproject.org/files/ENCFF214HFR/@@download/ENCFF214HFR.bigWig hg19 archived inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody, poor library complexity, severe bottlenecking ENCFF352YWR bam unfiltered alignments ENCSR720HUL ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F1-human ENCAB357OHU DNA False 2018-01-26 ENCODE 1 100 ENCFF807MUK, ENCFF921OKO, ENCFF944WBR 2206268735 ENCODE Processing Pipeline 53c4bf5e1c8cc525761d03fac14df9ad https://www.encodeproject.org/files/ENCFF352YWR/@@download/ENCFF352YWR.bam hg19 archived inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody, poor library complexity, severe bottlenecking ENCFF665NEW bigBed narrowPeak optimal idr thresholded peaks ENCSR720HUL ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F1-human ENCAB357OHU DNA False 2018-01-26 ENCODE 1, 2 ENCFF769WRU 786137 ENCODE Processing Pipeline cf493bebf2264a1428cafeb1f6bd653d https://www.encodeproject.org/files/ENCFF665NEW/@@download/ENCFF665NEW.bigBed GRCh38 archived inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody, poor library complexity, severe bottlenecking ENCFF769WRU bed narrowPeak optimal idr thresholded peaks ENCSR720HUL ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F1-human ENCAB357OHU DNA False 2018-01-26 ENCODE 1, 2 ENCFF020IMS, ENCFF230XQX, ENCFF419RSJ, ENCFF567YTM 363398 ENCODE Processing Pipeline b9825fab3cc6f4e6450fe0c9ad2e5411 https://www.encodeproject.org/files/ENCFF769WRU/@@download/ENCFF769WRU.bed.gz GRCh38 archived inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody, poor library complexity, severe bottlenecking ENCFF990RYC bigBed narrowPeak conservative idr thresholded peaks ENCSR720HUL ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F1-human ENCAB357OHU DNA False 2018-01-26 ENCODE 1, 2 ENCFF553TQP 695698 ENCODE Processing Pipeline 4ffc8e80aefefba0f04ac591879a12d0 https://www.encodeproject.org/files/ENCFF990RYC/@@download/ENCFF990RYC.bigBed GRCh38 archived inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody, poor library complexity, severe bottlenecking ENCFF553TQP bed narrowPeak conservative idr thresholded peaks ENCSR720HUL ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F1-human ENCAB357OHU DNA False 2018-01-26 ENCODE 1, 2 ENCFF020IMS, ENCFF230XQX, ENCFF419RSJ, ENCFF567YTM 308131 ENCODE Processing Pipeline 7b06b7c00c01baff82dcc3385553b7f8 https://www.encodeproject.org/files/ENCFF553TQP/@@download/ENCFF553TQP.bed.gz GRCh38 archived inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody, poor library complexity, severe bottlenecking ENCFF348GQQ bigBed narrowPeak peaks ENCSR720HUL ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F1-human ENCAB357OHU DNA False 2018-01-26 ENCODE 1, 2 ENCFF020IMS 13211440 ENCODE Processing Pipeline ee51a3af360e29dff5d45149504ccdf7 https://www.encodeproject.org/files/ENCFF348GQQ/@@download/ENCFF348GQQ.bigBed GRCh38 archived inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody, poor library complexity, severe bottlenecking ENCFF943RPX bigBed narrowPeak peaks ENCSR720HUL ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F1-human ENCAB357OHU DNA False 2018-01-26 ENCODE 2 ENCFF567YTM 13089765 ENCODE Processing Pipeline f1bb8220ba678667e5637ce037dcbba6 https://www.encodeproject.org/files/ENCFF943RPX/@@download/ENCFF943RPX.bigBed GRCh38 archived inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody, poor library complexity, severe bottlenecking ENCFF020IMS bed narrowPeak peaks ENCSR720HUL ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F1-human ENCAB357OHU DNA False 2018-01-26 ENCODE 1, 2 ENCFF227IZS, ENCFF648RLH, ENCFF910IKB, ENCFF972SUH 6898252 ENCODE Processing Pipeline da300ee37cdc1647d3e392e81a2ac376 https://www.encodeproject.org/files/ENCFF020IMS/@@download/ENCFF020IMS.bed.gz GRCh38 archived inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody, poor library complexity, severe bottlenecking ENCFF230XQX bed narrowPeak peaks ENCSR720HUL ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F1-human ENCAB357OHU DNA False 2018-01-26 ENCODE 1 ENCFF648RLH, ENCFF910IKB 6113164 ENCODE Processing Pipeline c6381f407ff1a83d6698a894657ab887 https://www.encodeproject.org/files/ENCFF230XQX/@@download/ENCFF230XQX.bed.gz GRCh38 archived inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody, poor library complexity, severe bottlenecking ENCFF550TLL bigWig fold change over control ENCSR720HUL ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F1-human ENCAB357OHU DNA False 2018-01-26 ENCODE 1, 2 ENCFF227IZS, ENCFF648RLH, ENCFF910IKB, ENCFF972SUH 1367623683 ENCODE Processing Pipeline 42bce5aef5d4053d7b9ed1332a09d261 https://www.encodeproject.org/files/ENCFF550TLL/@@download/ENCFF550TLL.bigWig GRCh38 archived inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody, poor library complexity, severe bottlenecking ENCFF632EWE bigWig fold change over control ENCSR720HUL ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F1-human ENCAB357OHU DNA False 2018-01-26 ENCODE 2 ENCFF227IZS, ENCFF972SUH 590882262 ENCODE Processing Pipeline 03cbcb0ac15dd9ba1e9a329f2f8c3c15 https://www.encodeproject.org/files/ENCFF632EWE/@@download/ENCFF632EWE.bigWig GRCh38 archived inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody, poor library complexity, severe bottlenecking ENCFF007NSI bigWig fold change over control ENCSR720HUL ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F1-human ENCAB357OHU DNA False 2018-01-26 ENCODE 1 ENCFF648RLH, ENCFF910IKB 694787302 ENCODE Processing Pipeline 40e3ec109c0de0aa862ae83dcd957f7d https://www.encodeproject.org/files/ENCFF007NSI/@@download/ENCFF007NSI.bigWig GRCh38 archived inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody, poor library complexity, severe bottlenecking ENCFF813LHY bigWig signal p-value ENCSR720HUL ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F1-human ENCAB357OHU DNA False 2018-01-26 ENCODE 1, 2 ENCFF227IZS, ENCFF648RLH, ENCFF910IKB, ENCFF972SUH 1326139102 ENCODE Processing Pipeline eb624eed3829a721988aac456497622a https://www.encodeproject.org/files/ENCFF813LHY/@@download/ENCFF813LHY.bigWig GRCh38 archived inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody, poor library complexity, severe bottlenecking ENCFF140YXW bigWig signal p-value ENCSR720HUL ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F1-human ENCAB357OHU DNA False 2018-01-26 ENCODE 2 ENCFF227IZS, ENCFF972SUH 796422041 ENCODE Processing Pipeline e034921c6238281132ec80b9ac3673a6 https://www.encodeproject.org/files/ENCFF140YXW/@@download/ENCFF140YXW.bigWig GRCh38 archived inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody, poor library complexity, severe bottlenecking ENCFF768AVQ bam unfiltered alignments ENCSR720HUL ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F1-human ENCAB357OHU DNA False 2018-01-26 ENCODE 1 100 ENCFF643CGH, ENCFF921OKO, ENCFF944WBR 2206480018 ENCODE Processing Pipeline 190533194768e6a9217f97fcce4f07a4 https://www.encodeproject.org/files/ENCFF768AVQ/@@download/ENCFF768AVQ.bam GRCh38 archived inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody, poor library complexity, severe bottlenecking ENCFF972SUH bam alignments ENCSR720HUL ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F1-human ENCAB357OHU DNA False 2018-01-26 ENCODE 2 100 ENCFF132KBU, ENCFF643CGH, ENCFF735BSJ 1378661538 ENCODE Processing Pipeline 38df4377b00011dcbabddab34ada9d78 https://www.encodeproject.org/files/ENCFF972SUH/@@download/ENCFF972SUH.bam GRCh38 archived inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody, poor library complexity, severe bottlenecking ENCFF950HYX bam unfiltered alignments ENCSR720HUL ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F1-human ENCAB357OHU DNA False 2018-01-26 ENCODE 2 100 ENCFF132KBU, ENCFF643CGH, ENCFF735BSJ 2151389253 ENCODE Processing Pipeline f7bc0406ae32be619df9337192ccd55b https://www.encodeproject.org/files/ENCFF950HYX/@@download/ENCFF950HYX.bam GRCh38 archived inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody, poor library complexity, severe bottlenecking ENCFF970IIN bam alignments ENCSR720HUL ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F1-human ENCAB357OHU DNA False 2018-01-26 ENCODE 1 100 ENCFF807MUK, ENCFF921OKO, ENCFF944WBR 1588793668 ENCODE Processing Pipeline 88d70478987f96688d3458589ae4f95a https://www.encodeproject.org/files/ENCFF970IIN/@@download/ENCFF970IIN.bam hg19 archived inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody, poor library complexity, severe bottlenecking ENCFF024YPR bam alignments ENCSR720HUL ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F1-human ENCAB357OHU DNA False 2018-01-26 ENCODE 2 100 ENCFF132KBU, ENCFF735BSJ, ENCFF807MUK 1378127841 ENCODE Processing Pipeline fa947ab1a2e53243edd1a0619782fde3 https://www.encodeproject.org/files/ENCFF024YPR/@@download/ENCFF024YPR.bam hg19 archived inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody, poor library complexity, severe bottlenecking ENCFF944WBR fastq reads ENCSR720HUL ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F1-human ENCAB357OHU DNA False 2018-01-26 ENCODE 1 1 100 paired-ended 1 ENCFF921OKO 1031779817 Michael Snyder, Stanford d798912d1066fcf21dcf45a8b32a0b11 https://www.encodeproject.org/files/ENCFF944WBR/@@download/ENCFF944WBR.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFF/ archived inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody, poor library complexity, severe bottlenecking ENCFF735BSJ fastq reads ENCSR720HUL ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F1-human ENCAB357OHU DNA False 2018-01-26 ENCODE 2 1 100 paired-ended 2 ENCFF132KBU 1097531347 Michael Snyder, Stanford 79670ff7efb809172524426bae31223e https://www.encodeproject.org/files/ENCFF735BSJ/@@download/ENCFF735BSJ.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFA/ archived inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody, poor library complexity, severe bottlenecking ENCFF132KBU fastq reads ENCSR720HUL ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F1-human ENCAB357OHU DNA False 2018-01-26 ENCODE 2 1 100 paired-ended 1 ENCFF735BSJ 1061529757 Michael Snyder, Stanford 5d1a15f933310daf33c0303f45c372c8 https://www.encodeproject.org/files/ENCFF132KBU/@@download/ENCFF132KBU.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFD/ archived inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody, poor library complexity, severe bottlenecking ENCFF497LFR bigBed narrowPeak peaks ENCSR720HUL ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F1-human ENCAB357OHU DNA False 2018-01-26 ENCODE 1, 2 ENCFF260KBY 13275630 ENCODE Processing Pipeline e914eae5d0f2a866db02d0f4eec8b154 https://www.encodeproject.org/files/ENCFF497LFR/@@download/ENCFF497LFR.bigBed hg19 released inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody, poor library complexity, severe bottlenecking ENCFF337FJT bigWig signal p-value ENCSR720HUL ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F1-human ENCAB357OHU DNA False 2018-01-26 ENCODE 1 ENCFF160VXC, ENCFF911AAQ 969501533 ENCODE Processing Pipeline fe8047b71244ab81d86cee115279b7fa https://www.encodeproject.org/files/ENCFF337FJT/@@download/ENCFF337FJT.bigWig hg19 released inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody, poor library complexity, severe bottlenecking ENCFF145VYG bigWig fold change over control ENCSR720HUL ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F1-human ENCAB357OHU DNA False 2018-01-26 ENCODE 1 ENCFF160VXC, ENCFF911AAQ 897711243 ENCODE Processing Pipeline c29cef7bbc7f6d5f86665865507199a6 https://www.encodeproject.org/files/ENCFF145VYG/@@download/ENCFF145VYG.bigWig hg19 released inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody, poor library complexity, severe bottlenecking ENCFF150XCG bigWig signal p-value ENCSR720HUL ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F1-human ENCAB357OHU DNA False 2018-01-26 ENCODE 2 ENCFF834TUP, ENCFF841KTI 886716522 ENCODE Processing Pipeline aeb7b6ba3746fb2a721db0e82a693126 https://www.encodeproject.org/files/ENCFF150XCG/@@download/ENCFF150XCG.bigWig hg19 released inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody, poor library complexity, severe bottlenecking ENCFF452ZKJ bigWig signal p-value ENCSR720HUL ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F1-human ENCAB357OHU DNA False 2018-01-26 ENCODE 1, 2 ENCFF160VXC, ENCFF834TUP, ENCFF841KTI, ENCFF911AAQ 1431483542 ENCODE Processing Pipeline f1d47284ec94a3d93f499d8ee2951ae0 https://www.encodeproject.org/files/ENCFF452ZKJ/@@download/ENCFF452ZKJ.bigWig hg19 released inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody, poor library complexity, severe bottlenecking ENCFF752PLO bigWig fold change over control ENCSR720HUL ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F1-human ENCAB357OHU DNA False 2018-01-26 ENCODE 2 ENCFF834TUP, ENCFF841KTI 832411630 ENCODE Processing Pipeline 80d68f3b45f69be8a156e149313bbba1 https://www.encodeproject.org/files/ENCFF752PLO/@@download/ENCFF752PLO.bigWig hg19 released inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody, poor library complexity, severe bottlenecking ENCFF723ILY bigWig fold change over control ENCSR720HUL ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F1-human ENCAB357OHU DNA False 2018-01-26 ENCODE 1, 2 ENCFF160VXC, ENCFF834TUP, ENCFF841KTI, ENCFF911AAQ 1703089881 ENCODE Processing Pipeline f4297957e7fc48009362db1473791a96 https://www.encodeproject.org/files/ENCFF723ILY/@@download/ENCFF723ILY.bigWig hg19 released inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody, poor library complexity, severe bottlenecking ENCFF199PBO bed narrowPeak peaks ENCSR720HUL ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F1-human ENCAB357OHU DNA False 2018-01-26 ENCODE 1 ENCFF160VXC, ENCFF911AAQ 6463924 ENCODE Processing Pipeline c12f8fc6733ef74ba731a112632d4e12 https://www.encodeproject.org/files/ENCFF199PBO/@@download/ENCFF199PBO.bed.gz hg19 released inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody, poor library complexity, severe bottlenecking ENCFF721GUV bed narrowPeak peaks ENCSR720HUL ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F1-human ENCAB357OHU DNA False 2018-01-26 ENCODE 2 ENCFF834TUP, ENCFF841KTI 6499363 ENCODE Processing Pipeline bf67c0603423efddd5ece0d9967c5b30 https://www.encodeproject.org/files/ENCFF721GUV/@@download/ENCFF721GUV.bed.gz hg19 released inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody, poor library complexity, severe bottlenecking ENCFF260KBY bed narrowPeak peaks ENCSR720HUL ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F1-human ENCAB357OHU DNA False 2018-01-26 ENCODE 1, 2 ENCFF160VXC, ENCFF834TUP, ENCFF841KTI, ENCFF911AAQ 7195753 ENCODE Processing Pipeline 0b6c06ceff1c1865273eb87fb1543b64 https://www.encodeproject.org/files/ENCFF260KBY/@@download/ENCFF260KBY.bed.gz hg19 released inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody, poor library complexity, severe bottlenecking ENCFF285ENJ bigBed narrowPeak peaks ENCSR720HUL ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F1-human ENCAB357OHU DNA False 2018-01-26 ENCODE 1 ENCFF199PBO 13296601 ENCODE Processing Pipeline 6f9c8a2ca3922a1dd6cafd3fc8bac66f https://www.encodeproject.org/files/ENCFF285ENJ/@@download/ENCFF285ENJ.bigBed hg19 released inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody, poor library complexity, severe bottlenecking ENCFF260XLM bigBed narrowPeak peaks ENCSR720HUL ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F1-human ENCAB357OHU DNA False 2018-01-26 ENCODE 2 ENCFF721GUV 13210483 ENCODE Processing Pipeline 208145843764590254991bd6df838007 https://www.encodeproject.org/files/ENCFF260XLM/@@download/ENCFF260XLM.bigBed hg19 released inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody, poor library complexity, severe bottlenecking ENCFF776ARH bed narrowPeak conservative idr thresholded peaks ENCSR720HUL ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F1-human ENCAB357OHU DNA False 2018-01-26 ENCODE 1, 2 ENCFF001TDO, ENCFF199PBO, ENCFF260KBY, ENCFF721GUV 360065 ENCODE Processing Pipeline 3fd6d5884717808bc6e7d03a8423362c https://www.encodeproject.org/files/ENCFF776ARH/@@download/ENCFF776ARH.bed.gz hg19 released inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody, poor library complexity, severe bottlenecking ENCFF135FEB bigBed narrowPeak conservative idr thresholded peaks ENCSR720HUL ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F1-human ENCAB357OHU DNA False 2018-01-26 ENCODE 1, 2 ENCFF776ARH 800512 ENCODE Processing Pipeline 40f9eb282d6251cc2497900b2905304a https://www.encodeproject.org/files/ENCFF135FEB/@@download/ENCFF135FEB.bigBed hg19 released inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody, poor library complexity, severe bottlenecking ENCFF106DAY bed narrowPeak optimal idr thresholded peaks ENCSR720HUL ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F1-human ENCAB357OHU DNA False 2018-01-26 ENCODE 1, 2 ENCFF001TDO, ENCFF199PBO, ENCFF260KBY, ENCFF721GUV 431592 ENCODE Processing Pipeline eebcfeb474d20d087492413655d9c57c https://www.encodeproject.org/files/ENCFF106DAY/@@download/ENCFF106DAY.bed.gz hg19 released inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody, poor library complexity, severe bottlenecking ENCFF741ADC bigBed narrowPeak optimal idr thresholded peaks ENCSR720HUL ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F1-human ENCAB357OHU DNA False 2018-01-26 ENCODE 1, 2 ENCFF106DAY 914516 ENCODE Processing Pipeline 0f7e99b4a85f590e6576109e60dbf7e3 https://www.encodeproject.org/files/ENCFF741ADC/@@download/ENCFF741ADC.bigBed hg19 released inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody, poor library complexity, severe bottlenecking ENCFF960MHJ bigWig fold change over control ENCSR720HUL ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F1-human ENCAB357OHU DNA False 2018-01-26 ENCODE 1 ENCFF260TPL, ENCFF790TAN 898782910 ENCODE Processing Pipeline 0d7f9f721e330b94eaf119b8249e112c https://www.encodeproject.org/files/ENCFF960MHJ/@@download/ENCFF960MHJ.bigWig GRCh38 released inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody, poor library complexity, severe bottlenecking ENCFF852NLH bigWig fold change over control ENCSR720HUL ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F1-human ENCAB357OHU DNA False 2018-01-26 ENCODE 1, 2 ENCFF260TPL, ENCFF508JKO, ENCFF712WXB, ENCFF790TAN 1671277139 ENCODE Processing Pipeline e473fd536ef91579fcd014c906d47d72 https://www.encodeproject.org/files/ENCFF852NLH/@@download/ENCFF852NLH.bigWig GRCh38 released inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody, poor library complexity, severe bottlenecking ENCFF626AVJ bed narrowPeak peaks ENCSR720HUL ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F1-human ENCAB357OHU DNA False 2018-01-26 ENCODE 1, 2 ENCFF260TPL, ENCFF508JKO, ENCFF712WXB, ENCFF790TAN 7179353 ENCODE Processing Pipeline 4f87a8ef0e3b3d0e52f8a561ab7ea634 https://www.encodeproject.org/files/ENCFF626AVJ/@@download/ENCFF626AVJ.bed.gz GRCh38 released inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody, poor library complexity, severe bottlenecking ENCFF507MXA bigBed narrowPeak conservative idr thresholded peaks ENCSR720HUL ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F1-human ENCAB357OHU DNA False 2018-01-26 ENCODE 1, 2 ENCFF784XVN 797339 ENCODE Processing Pipeline 19d65a68b46b83a2a674ce9a1e8b8df1 https://www.encodeproject.org/files/ENCFF507MXA/@@download/ENCFF507MXA.bigBed GRCh38 released inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody, poor library complexity, severe bottlenecking ENCFF149VUU bigWig signal p-value ENCSR720HUL ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F1-human ENCAB357OHU DNA False 2018-01-26 ENCODE 1 ENCFF260TPL, ENCFF790TAN 884089527 ENCODE Processing Pipeline f111bff837d7ece2d0ed8581f82bffa3 https://www.encodeproject.org/files/ENCFF149VUU/@@download/ENCFF149VUU.bigWig GRCh38 archived inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody, poor library complexity, severe bottlenecking ENCFF702TCQ bigWig signal p-value ENCSR720HUL ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F1-human ENCAB357OHU DNA False 2018-01-26 ENCODE 2 ENCFF508JKO, ENCFF712WXB 849606128 ENCODE Processing Pipeline beb25012b4ba1680d14f4bd75828336d https://www.encodeproject.org/files/ENCFF702TCQ/@@download/ENCFF702TCQ.bigWig GRCh38 released inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody, poor library complexity, severe bottlenecking ENCFF453DTP bed narrowPeak peaks ENCSR720HUL ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F1-human ENCAB357OHU DNA False 2018-01-26 ENCODE 2 ENCFF508JKO, ENCFF712WXB 6521317 ENCODE Processing Pipeline 09d172ccf3834abca558f721c35347ed https://www.encodeproject.org/files/ENCFF453DTP/@@download/ENCFF453DTP.bed.gz GRCh38 released inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody, poor library complexity, severe bottlenecking ENCFF325QPB bigBed narrowPeak peaks ENCSR720HUL ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F1-human ENCAB357OHU DNA False 2018-01-26 ENCODE 1 ENCFF397EQE 13306316 ENCODE Processing Pipeline aced378ba14d883b722472b1600f4554 https://www.encodeproject.org/files/ENCFF325QPB/@@download/ENCFF325QPB.bigBed GRCh38 released inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody, poor library complexity, severe bottlenecking ENCFF107QWO bigBed narrowPeak peaks ENCSR720HUL ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F1-human ENCAB357OHU DNA False 2018-01-26 ENCODE 2 ENCFF453DTP 13247760 ENCODE Processing Pipeline 43c8b9c9d468532686995ba60bc99ebe https://www.encodeproject.org/files/ENCFF107QWO/@@download/ENCFF107QWO.bigBed GRCh38 released inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody, poor library complexity, severe bottlenecking ENCFF256PVN bigWig signal p-value ENCSR720HUL ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F1-human ENCAB357OHU DNA False 2018-01-26 ENCODE 1, 2 ENCFF260TPL, ENCFF508JKO, ENCFF712WXB, ENCFF790TAN 1394510376 ENCODE Processing Pipeline 02a02d4f72b0bca6dd05c6e6a40f129e https://www.encodeproject.org/files/ENCFF256PVN/@@download/ENCFF256PVN.bigWig GRCh38 released inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody, poor library complexity, severe bottlenecking ENCFF520HAX bigBed narrowPeak peaks ENCSR720HUL ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F1-human ENCAB357OHU DNA False 2018-01-26 ENCODE 1, 2 ENCFF626AVJ 13263200 ENCODE Processing Pipeline df91fda79a5d0d77db69f55acfe7e87e https://www.encodeproject.org/files/ENCFF520HAX/@@download/ENCFF520HAX.bigBed GRCh38 released inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody, poor library complexity, severe bottlenecking ENCFF134JLR bed narrowPeak optimal idr thresholded peaks ENCSR720HUL ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F1-human ENCAB357OHU DNA False 2018-01-26 ENCODE 1, 2 ENCFF397EQE, ENCFF419RSJ, ENCFF453DTP, ENCFF626AVJ 418689 ENCODE Processing Pipeline 5a13794056dcab90483355bd68656432 https://www.encodeproject.org/files/ENCFF134JLR/@@download/ENCFF134JLR.bed.gz GRCh38 released inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody, poor library complexity, severe bottlenecking ENCFF813QOS bigWig fold change over control ENCSR720HUL ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F1-human ENCAB357OHU DNA False 2018-01-26 ENCODE 2 ENCFF508JKO, ENCFF712WXB 832096133 ENCODE Processing Pipeline 89f467102b23880dfb397f4caef3c1d6 https://www.encodeproject.org/files/ENCFF813QOS/@@download/ENCFF813QOS.bigWig GRCh38 released inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody, poor library complexity, severe bottlenecking ENCFF397EQE bed narrowPeak peaks ENCSR720HUL ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F1-human ENCAB357OHU DNA False 2018-01-26 ENCODE 1 ENCFF260TPL, ENCFF790TAN 6461796 ENCODE Processing Pipeline 9852f32c8ba230af66223b016559c9d2 https://www.encodeproject.org/files/ENCFF397EQE/@@download/ENCFF397EQE.bed.gz GRCh38 released inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody, poor library complexity, severe bottlenecking ENCFF784XVN bed narrowPeak conservative idr thresholded peaks ENCSR720HUL ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F1-human ENCAB357OHU DNA False 2018-01-26 ENCODE 1, 2 ENCFF397EQE, ENCFF419RSJ, ENCFF453DTP, ENCFF626AVJ 355182 ENCODE Processing Pipeline 261ddf3d9be794ad514690cbc29de033 https://www.encodeproject.org/files/ENCFF784XVN/@@download/ENCFF784XVN.bed.gz GRCh38 released inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody, poor library complexity, severe bottlenecking ENCFF648GYE bigBed narrowPeak optimal idr thresholded peaks ENCSR720HUL ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F1-human ENCAB357OHU DNA False 2018-01-26 ENCODE 1, 2 ENCFF134JLR 898367 ENCODE Processing Pipeline 73ea449d0730648287060f01323e5d4c https://www.encodeproject.org/files/ENCFF648GYE/@@download/ENCFF648GYE.bigBed GRCh38 released inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody, poor library complexity, severe bottlenecking ENCFF636OJT fastq reads ENCSR817QKV ChIP-seq EFO:0002067 K562 cell line Homo sapiens EP400-human ENCAB702SYV DNA False 2017-06-29 ENCODE 2 1 100 paired-ended 2 ENCFF076RPA 6931039347 Michael Snyder, Stanford 860c35abe99b67b0ad26d267c4d04f72 SRA:SRR6213990 https://www.encodeproject.org/files/ENCFF636OJT/@@download/ENCFF636OJT.fastq.gz Illumina HiSeq 4000 /files/ENCFF502GTS/ released mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity ENCFF076RPA fastq reads ENCSR817QKV ChIP-seq EFO:0002067 K562 cell line Homo sapiens EP400-human ENCAB702SYV DNA False 2017-06-29 ENCODE 2 1 100 paired-ended 1 ENCFF636OJT 6586621246 Michael Snyder, Stanford 0c6fe0618229ca600839d5e3fa37fd8a SRA:SRR6213990 https://www.encodeproject.org/files/ENCFF076RPA/@@download/ENCFF076RPA.fastq.gz Illumina HiSeq 4000 /files/ENCFF498JMO/ released mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity ENCFF604RKI fastq reads ENCSR817QKV ChIP-seq EFO:0002067 K562 cell line Homo sapiens EP400-human ENCAB702SYV DNA False 2017-06-29 ENCODE 1 1 100 paired-ended 1 ENCFF478BKV 2550091931 Michael Snyder, Stanford 086948816bc6e1c57d058ca24a86e920 SRA:SRR6213991 https://www.encodeproject.org/files/ENCFF604RKI/@@download/ENCFF604RKI.fastq.gz Illumina HiSeq 4000 /files/ENCFF259GQA/ released mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity ENCFF478BKV fastq reads ENCSR817QKV ChIP-seq EFO:0002067 K562 cell line Homo sapiens EP400-human ENCAB702SYV DNA False 2017-06-29 ENCODE 1 1 100 paired-ended 2 ENCFF604RKI 2897771533 Michael Snyder, Stanford 4f91e40c9673e898901ca98e9c8fee4e SRA:SRR6213991 https://www.encodeproject.org/files/ENCFF478BKV/@@download/ENCFF478BKV.fastq.gz Illumina HiSeq 4000 /files/ENCFF837MIV/ released mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity ENCFF131SBW bam unfiltered alignments ENCSR817QKV ChIP-seq EFO:0002067 K562 cell line Homo sapiens EP400-human ENCAB702SYV DNA False 2017-06-29 ENCODE 1 100 ENCFF478BKV, ENCFF604RKI, ENCFF807MUK 5027077568 ENCODE Processing Pipeline e5f45acaa9a8bc80b1ca66750b3a4e51 https://www.encodeproject.org/files/ENCFF131SBW/@@download/ENCFF131SBW.bam hg19 released mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity ENCFF111XPI bam unfiltered alignments ENCSR817QKV ChIP-seq EFO:0002067 K562 cell line Homo sapiens EP400-human ENCAB702SYV DNA False 2017-06-29 ENCODE 1 100 ENCFF478BKV, ENCFF604RKI, ENCFF643CGH 5029776559 ENCODE Processing Pipeline 7f573cee1744dff570b5bb344ea348d0 https://www.encodeproject.org/files/ENCFF111XPI/@@download/ENCFF111XPI.bam GRCh38 released mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity ENCFF751WCI bam alignments ENCSR817QKV ChIP-seq EFO:0002067 K562 cell line Homo sapiens EP400-human ENCAB702SYV DNA False 2017-06-29 ENCODE 1 100 ENCFF478BKV, ENCFF604RKI, ENCFF643CGH 3156075469 ENCODE Processing Pipeline 805c82d8df2e031338bebaf73ead8706 https://www.encodeproject.org/files/ENCFF751WCI/@@download/ENCFF751WCI.bam GRCh38 released mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity ENCFF773WIK bam alignments ENCSR817QKV ChIP-seq EFO:0002067 K562 cell line Homo sapiens EP400-human ENCAB702SYV DNA False 2017-06-29 ENCODE 1 100 ENCFF478BKV, ENCFF604RKI, ENCFF807MUK 3153691796 ENCODE Processing Pipeline 30708ebfe83e1d6a33a5873387fa4485 https://www.encodeproject.org/files/ENCFF773WIK/@@download/ENCFF773WIK.bam hg19 released mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity ENCFF458PYE bam unfiltered alignments ENCSR817QKV ChIP-seq EFO:0002067 K562 cell line Homo sapiens EP400-human ENCAB702SYV DNA False 2017-06-29 ENCODE 2 100 ENCFF076RPA, ENCFF636OJT, ENCFF807MUK 11733567985 ENCODE Processing Pipeline aac27dc175f5e09ea77e5ee5b953a7fc https://www.encodeproject.org/files/ENCFF458PYE/@@download/ENCFF458PYE.bam hg19 released mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity ENCFF622EUC bam unfiltered alignments ENCSR817QKV ChIP-seq EFO:0002067 K562 cell line Homo sapiens EP400-human ENCAB702SYV DNA False 2017-06-29 ENCODE 2 100 ENCFF076RPA, ENCFF636OJT, ENCFF643CGH 11739046964 ENCODE Processing Pipeline b3897cdb4590dd0213111ebc8e88e9c0 https://www.encodeproject.org/files/ENCFF622EUC/@@download/ENCFF622EUC.bam GRCh38 released mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity ENCFF147YGB bam alignments ENCSR817QKV ChIP-seq EFO:0002067 K562 cell line Homo sapiens EP400-human ENCAB702SYV DNA False 2017-06-29 ENCODE 2 100 ENCFF076RPA, ENCFF636OJT, ENCFF807MUK 8412892923 ENCODE Processing Pipeline 35ebc010af1ba7e7aab235226907c0aa https://www.encodeproject.org/files/ENCFF147YGB/@@download/ENCFF147YGB.bam hg19 released mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity ENCFF786JYO bam alignments ENCSR817QKV ChIP-seq EFO:0002067 K562 cell line Homo sapiens EP400-human ENCAB702SYV DNA False 2017-06-29 ENCODE 2 100 ENCFF076RPA, ENCFF636OJT, ENCFF643CGH 8422111950 ENCODE Processing Pipeline 9d8ed97e751d02eadb2da9113fe64a24 https://www.encodeproject.org/files/ENCFF786JYO/@@download/ENCFF786JYO.bam GRCh38 released mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity ENCFF377FGX bigWig signal p-value ENCSR817QKV ChIP-seq EFO:0002067 K562 cell line Homo sapiens EP400-human ENCAB702SYV DNA False 2017-06-29 ENCODE 2 ENCFF712WXB, ENCFF786JYO, ENCFF790TAN 2138249771 ENCODE Processing Pipeline f0761a86bf8531076f6b67a019415031 https://www.encodeproject.org/files/ENCFF377FGX/@@download/ENCFF377FGX.bigWig GRCh38 released mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity ENCFF749AZQ bigWig fold change over control ENCSR817QKV ChIP-seq EFO:0002067 K562 cell line Homo sapiens EP400-human ENCAB702SYV DNA False 2017-06-29 ENCODE 2 ENCFF712WXB, ENCFF786JYO, ENCFF790TAN 2486695419 ENCODE Processing Pipeline 83c4f8754b647ccf1d4c51254ed59b44 https://www.encodeproject.org/files/ENCFF749AZQ/@@download/ENCFF749AZQ.bigWig GRCh38 released mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity ENCFF947TNV bigWig signal p-value ENCSR817QKV ChIP-seq EFO:0002067 K562 cell line Homo sapiens EP400-human ENCAB702SYV DNA False 2017-06-29 ENCODE 1 ENCFF712WXB, ENCFF751WCI 1109797767 ENCODE Processing Pipeline 3ea7aa0202fcf7d28ca6dc3eb56dd948 https://www.encodeproject.org/files/ENCFF947TNV/@@download/ENCFF947TNV.bigWig GRCh38 released mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity ENCFF406KPK bigWig signal p-value ENCSR817QKV ChIP-seq EFO:0002067 K562 cell line Homo sapiens EP400-human ENCAB702SYV DNA False 2017-06-29 ENCODE 1, 2 ENCFF712WXB, ENCFF751WCI, ENCFF786JYO, ENCFF790TAN 2355499521 ENCODE Processing Pipeline d0f5235014ffbe0c4989265c9a26d0c0 https://www.encodeproject.org/files/ENCFF406KPK/@@download/ENCFF406KPK.bigWig GRCh38 released mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity ENCFF811PAW bigWig fold change over control ENCSR817QKV ChIP-seq EFO:0002067 K562 cell line Homo sapiens EP400-human ENCAB702SYV DNA False 2017-06-29 ENCODE 1 ENCFF712WXB, ENCFF751WCI 1155983707 ENCODE Processing Pipeline ad15b87d629308e7c747daf730ae17dc https://www.encodeproject.org/files/ENCFF811PAW/@@download/ENCFF811PAW.bigWig GRCh38 released mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity ENCFF521PTP bed narrowPeak peaks ENCSR817QKV ChIP-seq EFO:0002067 K562 cell line Homo sapiens EP400-human ENCAB702SYV DNA False 2017-06-29 ENCODE 1 ENCFF712WXB, ENCFF751WCI 7122323 ENCODE Processing Pipeline 581c683558405edda82b169e5c2e9c86 https://www.encodeproject.org/files/ENCFF521PTP/@@download/ENCFF521PTP.bed.gz GRCh38 released mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity ENCFF225FLG bigBed narrowPeak peaks ENCSR817QKV ChIP-seq EFO:0002067 K562 cell line Homo sapiens EP400-human ENCAB702SYV DNA False 2017-06-29 ENCODE 2 ENCFF643GEF 12818329 ENCODE Processing Pipeline 1e26349a79f8f0a19938855bea5b00b4 https://www.encodeproject.org/files/ENCFF225FLG/@@download/ENCFF225FLG.bigBed GRCh38 released mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity ENCFF097EAL bigBed narrowPeak optimal idr thresholded peaks ENCSR817QKV ChIP-seq EFO:0002067 K562 cell line Homo sapiens EP400-human ENCAB702SYV DNA False 2017-06-29 ENCODE 1, 2 ENCFF225BXA 1305785 ENCODE Processing Pipeline 0960a54d4613e59d6350480224ad81b7 https://www.encodeproject.org/files/ENCFF097EAL/@@download/ENCFF097EAL.bigBed GRCh38 released mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity ENCFF931ZYG bigWig fold change over control ENCSR817QKV ChIP-seq EFO:0002067 K562 cell line Homo sapiens EP400-human ENCAB702SYV DNA False 2017-06-29 ENCODE 1, 2 ENCFF712WXB, ENCFF751WCI, ENCFF786JYO, ENCFF790TAN 2764094144 ENCODE Processing Pipeline 98bbfe46bdf37870d18080b8ffc8b43c https://www.encodeproject.org/files/ENCFF931ZYG/@@download/ENCFF931ZYG.bigWig GRCh38 released mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity ENCFF643GEF bed narrowPeak peaks ENCSR817QKV ChIP-seq EFO:0002067 K562 cell line Homo sapiens EP400-human ENCAB702SYV DNA False 2017-06-29 ENCODE 2 ENCFF712WXB, ENCFF786JYO, ENCFF790TAN 7277909 ENCODE Processing Pipeline 55508abd54ea2d9fd1f806f339b908d0 https://www.encodeproject.org/files/ENCFF643GEF/@@download/ENCFF643GEF.bed.gz GRCh38 released mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity ENCFF565YNS bigBed narrowPeak peaks ENCSR817QKV ChIP-seq EFO:0002067 K562 cell line Homo sapiens EP400-human ENCAB702SYV DNA False 2017-06-29 ENCODE 1 ENCFF521PTP 12867392 ENCODE Processing Pipeline 12f62935bb7deea4cea4a398ba35acdb https://www.encodeproject.org/files/ENCFF565YNS/@@download/ENCFF565YNS.bigBed GRCh38 released mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity ENCFF322FWS bed narrowPeak peaks ENCSR817QKV ChIP-seq EFO:0002067 K562 cell line Homo sapiens EP400-human ENCAB702SYV DNA False 2017-06-29 ENCODE 1, 2 ENCFF712WXB, ENCFF751WCI, ENCFF786JYO, ENCFF790TAN 7294067 ENCODE Processing Pipeline c6346bd9a26e09c1141fd6456fab2023 https://www.encodeproject.org/files/ENCFF322FWS/@@download/ENCFF322FWS.bed.gz GRCh38 released mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity ENCFF929PEV bigBed narrowPeak peaks ENCSR817QKV ChIP-seq EFO:0002067 K562 cell line Homo sapiens EP400-human ENCAB702SYV DNA False 2017-06-29 ENCODE 1, 2 ENCFF322FWS 12735772 ENCODE Processing Pipeline 29729d447f33bd0fcee2fe7cf5f253ca https://www.encodeproject.org/files/ENCFF929PEV/@@download/ENCFF929PEV.bigBed GRCh38 released mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity ENCFF225BXA bed narrowPeak optimal idr thresholded peaks ENCSR817QKV ChIP-seq EFO:0002067 K562 cell line Homo sapiens EP400-human ENCAB702SYV DNA False 2017-06-29 ENCODE 1, 2 ENCFF322FWS, ENCFF419RSJ, ENCFF521PTP, ENCFF643GEF 620939 ENCODE Processing Pipeline 484ba0bb3a975de9a58cca6606d4af79 https://www.encodeproject.org/files/ENCFF225BXA/@@download/ENCFF225BXA.bed.gz GRCh38 released mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity ENCFF993VKU bigWig fold change over control ENCSR817QKV ChIP-seq EFO:0002067 K562 cell line Homo sapiens EP400-human ENCAB702SYV DNA False 2017-06-29 ENCODE 2 ENCFF147YGB, ENCFF160VXC, ENCFF834TUP 2498190360 ENCODE Processing Pipeline 16d5576144d23df53b2d36f2c3343117 https://www.encodeproject.org/files/ENCFF993VKU/@@download/ENCFF993VKU.bigWig hg19 released mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity ENCFF986DDI bed narrowPeak peaks ENCSR817QKV ChIP-seq EFO:0002067 K562 cell line Homo sapiens EP400-human ENCAB702SYV DNA False 2017-06-29 ENCODE 1 ENCFF773WIK, ENCFF834TUP 7123126 ENCODE Processing Pipeline bbb75f1080f65d0247bac28cfbadfa10 https://www.encodeproject.org/files/ENCFF986DDI/@@download/ENCFF986DDI.bed.gz hg19 released mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity ENCFF420YQY bigBed narrowPeak peaks ENCSR817QKV ChIP-seq EFO:0002067 K562 cell line Homo sapiens EP400-human ENCAB702SYV DNA False 2017-06-29 ENCODE 2 ENCFF311FOZ 12822151 ENCODE Processing Pipeline ec0fabf6167bb10b9ec6e4beb7c9686d https://www.encodeproject.org/files/ENCFF420YQY/@@download/ENCFF420YQY.bigBed hg19 released mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity ENCFF605YGM bigWig signal p-value ENCSR817QKV ChIP-seq EFO:0002067 K562 cell line Homo sapiens EP400-human ENCAB702SYV DNA False 2017-06-29 ENCODE 1 ENCFF773WIK, ENCFF834TUP 1142750307 ENCODE Processing Pipeline bb645d14481d2225bd79f056a9b6acde https://www.encodeproject.org/files/ENCFF605YGM/@@download/ENCFF605YGM.bigWig hg19 released mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity ENCFF636ZVO bigWig signal p-value ENCSR817QKV ChIP-seq EFO:0002067 K562 cell line Homo sapiens EP400-human ENCAB702SYV DNA False 2017-06-29 ENCODE 2 ENCFF147YGB, ENCFF160VXC, ENCFF834TUP 2216454495 ENCODE Processing Pipeline 07dc20862c6923e12794487d3d8fc2b3 https://www.encodeproject.org/files/ENCFF636ZVO/@@download/ENCFF636ZVO.bigWig hg19 released mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity ENCFF748LAO bigWig signal p-value ENCSR817QKV ChIP-seq EFO:0002067 K562 cell line Homo sapiens EP400-human ENCAB702SYV DNA False 2017-06-29 ENCODE 1, 2 ENCFF147YGB, ENCFF160VXC, ENCFF773WIK, ENCFF834TUP 2365289286 ENCODE Processing Pipeline ae95b22da46fc55976a4d4ed998246e2 https://www.encodeproject.org/files/ENCFF748LAO/@@download/ENCFF748LAO.bigWig hg19 released mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity ENCFF226XAW bigWig fold change over control ENCSR817QKV ChIP-seq EFO:0002067 K562 cell line Homo sapiens EP400-human ENCAB702SYV DNA False 2017-06-29 ENCODE 1, 2 ENCFF147YGB, ENCFF160VXC, ENCFF773WIK, ENCFF834TUP 2775041272 ENCODE Processing Pipeline 3f9fa50b598dca5d4a41e42122c6d462 https://www.encodeproject.org/files/ENCFF226XAW/@@download/ENCFF226XAW.bigWig hg19 released mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity ENCFF311FOZ bed narrowPeak peaks ENCSR817QKV ChIP-seq EFO:0002067 K562 cell line Homo sapiens EP400-human ENCAB702SYV DNA False 2017-06-29 ENCODE 2 ENCFF147YGB, ENCFF160VXC, ENCFF834TUP 7285652 ENCODE Processing Pipeline 1a0604f259a0b01e89094bf7f2d187be https://www.encodeproject.org/files/ENCFF311FOZ/@@download/ENCFF311FOZ.bed.gz hg19 released mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity ENCFF307VFN bed narrowPeak peaks ENCSR817QKV ChIP-seq EFO:0002067 K562 cell line Homo sapiens EP400-human ENCAB702SYV DNA False 2017-06-29 ENCODE 1, 2 ENCFF147YGB, ENCFF160VXC, ENCFF773WIK, ENCFF834TUP 7287629 ENCODE Processing Pipeline 63a0390ef128a8738418b65c96ef42f0 https://www.encodeproject.org/files/ENCFF307VFN/@@download/ENCFF307VFN.bed.gz hg19 released mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity ENCFF050MMS bigWig fold change over control ENCSR817QKV ChIP-seq EFO:0002067 K562 cell line Homo sapiens EP400-human ENCAB702SYV DNA False 2017-06-29 ENCODE 1 ENCFF773WIK, ENCFF834TUP 1156616005 ENCODE Processing Pipeline d884e1bde4a62538a02bd67464e243a2 https://www.encodeproject.org/files/ENCFF050MMS/@@download/ENCFF050MMS.bigWig hg19 released mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity ENCFF289FWJ bigBed narrowPeak peaks ENCSR817QKV ChIP-seq EFO:0002067 K562 cell line Homo sapiens EP400-human ENCAB702SYV DNA False 2017-06-29 ENCODE 1 ENCFF986DDI 12863413 ENCODE Processing Pipeline abc40b20e0605da86a0ea879735b6993 https://www.encodeproject.org/files/ENCFF289FWJ/@@download/ENCFF289FWJ.bigBed hg19 released mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity ENCFF996EZJ bigBed narrowPeak peaks ENCSR817QKV ChIP-seq EFO:0002067 K562 cell line Homo sapiens EP400-human ENCAB702SYV DNA False 2017-06-29 ENCODE 1, 2 ENCFF307VFN 12714362 ENCODE Processing Pipeline 04ab517b7a0f41572a22ca5e7dc282a4 https://www.encodeproject.org/files/ENCFF996EZJ/@@download/ENCFF996EZJ.bigBed hg19 released mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity ENCFF925ANU bed narrowPeak optimal idr thresholded peaks ENCSR817QKV ChIP-seq EFO:0002067 K562 cell line Homo sapiens EP400-human ENCAB702SYV DNA False 2017-06-29 ENCODE 1, 2 ENCFF001TDO, ENCFF307VFN, ENCFF311FOZ, ENCFF986DDI 620214 ENCODE Processing Pipeline a21ec613c1cc66f3735a50212f8ee1f9 https://www.encodeproject.org/files/ENCFF925ANU/@@download/ENCFF925ANU.bed.gz hg19 released mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity ENCFF663BON bigBed narrowPeak optimal idr thresholded peaks ENCSR817QKV ChIP-seq EFO:0002067 K562 cell line Homo sapiens EP400-human ENCAB702SYV DNA False 2017-06-29 ENCODE 1, 2 ENCFF925ANU 1299359 ENCODE Processing Pipeline b707509459cc74cff1de9f8620b4818e https://www.encodeproject.org/files/ENCFF663BON/@@download/ENCFF663BON.bigBed hg19 released mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity ENCFF155PZO bam unfiltered alignments ENCSR494TDU ChIP-seq EFO:0002067 K562 cell line Homo sapiens NRF1-human ENCAB000BLM DNA False 2014-07-07 ENCODE 2 100 ENCFF002DPD, ENCFF002EGB, ENCFF807MUK 5825481798 ENCODE Processing Pipeline f5dcfd93bb67c17b7a4d3ad5e6a40ff5 https://www.encodeproject.org/files/ENCFF155PZO/@@download/ENCFF155PZO.bam hg19 released mild to moderate bottlenecking missing control alignments ENCFF347JRO bam unfiltered alignments ENCSR494TDU ChIP-seq EFO:0002067 K562 cell line Homo sapiens NRF1-human ENCAB000BLM DNA False 2014-07-07 ENCODE 1 100 ENCFF002DPB, ENCFF002DUE, ENCFF807MUK 5033503736 ENCODE Processing Pipeline fee1764dd1850d129a44a60810dfd0fe https://www.encodeproject.org/files/ENCFF347JRO/@@download/ENCFF347JRO.bam hg19 released mild to moderate bottlenecking missing control alignments ENCFF932YKV bigWig signal p-value ENCSR494TDU ChIP-seq EFO:0002067 K562 cell line Homo sapiens NRF1-human ENCAB000BLM DNA False 2014-07-07 ENCODE 1 ENCFF581ZJL, ENCFF882JOI 1022623777 ENCODE Processing Pipeline 9b9484fd1a2cfef039f6e91228eb04d7 https://www.encodeproject.org/files/ENCFF932YKV/@@download/ENCFF932YKV.bigWig hg19 released mild to moderate bottlenecking missing control alignments ENCFF581WEG bigWig fold change over control ENCSR494TDU ChIP-seq EFO:0002067 K562 cell line Homo sapiens NRF1-human ENCAB000BLM DNA False 2014-07-07 ENCODE 1 ENCFF581ZJL, ENCFF882JOI 986651360 ENCODE Processing Pipeline c81c686ee74df7cbf5147f8ebdb1f3bf https://www.encodeproject.org/files/ENCFF581WEG/@@download/ENCFF581WEG.bigWig hg19 released mild to moderate bottlenecking missing control alignments ENCFF436NWO bigWig signal p-value ENCSR494TDU ChIP-seq EFO:0002067 K562 cell line Homo sapiens NRF1-human ENCAB000BLM DNA False 2014-07-07 ENCODE 2 ENCFF051LWI, ENCFF724MBT 1249766523 ENCODE Processing Pipeline 24b80a133640c55e128b4ec0986e3c63 https://www.encodeproject.org/files/ENCFF436NWO/@@download/ENCFF436NWO.bigWig hg19 released mild to moderate bottlenecking missing control alignments ENCFF296BCS bigWig signal p-value ENCSR494TDU ChIP-seq EFO:0002067 K562 cell line Homo sapiens NRF1-human ENCAB000BLM DNA False 2014-07-07 ENCODE 1, 2 ENCFF051LWI, ENCFF581ZJL, ENCFF724MBT, ENCFF882JOI 1403772464 ENCODE Processing Pipeline 8f3e11d743546966f1e70cf7bbe0503d https://www.encodeproject.org/files/ENCFF296BCS/@@download/ENCFF296BCS.bigWig hg19 released mild to moderate bottlenecking missing control alignments ENCFF002DPB fastq reads ENCSR494TDU ChIP-seq EFO:0002067 K562 cell line Homo sapiens NRF1-human ENCAB000BLM DNA False 2014-07-07 ENCODE 1 1 100 paired-ended 1 ENCFF002DUE 2535556722 Michael Snyder, Stanford 2d32499003243f4f1d4640252295c05e SRA:SRR5111677 https://www.encodeproject.org/files/ENCFF002DPB/@@download/ENCFF002DPB.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFF/ released mild to moderate bottlenecking missing control alignments ENCFF002DPD fastq reads ENCSR494TDU ChIP-seq EFO:0002067 K562 cell line Homo sapiens NRF1-human ENCAB000BLM DNA False 2014-07-07 ENCODE 2 1 100 paired-ended 2 ENCFF002EGB 2832898701 Michael Snyder, Stanford 3ea062eaccc7dd99e36ef3c38699d8a2 SRA:SRR5111676 https://www.encodeproject.org/files/ENCFF002DPD/@@download/ENCFF002DPD.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFA/ released mild to moderate bottlenecking missing control alignments ENCFF002DUE fastq reads ENCSR494TDU ChIP-seq EFO:0002067 K562 cell line Homo sapiens NRF1-human ENCAB000BLM DNA False 2014-07-07 ENCODE 1 1 100 paired-ended 2 ENCFF002DPB 2619130916 Michael Snyder, Stanford 97f8017d95026b3e924331791c468f2f SRA:SRR5111677 https://www.encodeproject.org/files/ENCFF002DUE/@@download/ENCFF002DUE.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFH/ released mild to moderate bottlenecking missing control alignments ENCFF002EGB fastq reads ENCSR494TDU ChIP-seq EFO:0002067 K562 cell line Homo sapiens NRF1-human ENCAB000BLM DNA False 2014-07-07 ENCODE 2 1 100 paired-ended 1 ENCFF002DPD 2768716559 Michael Snyder, Stanford ff3a614ac05fb9c01842ebdcd19e1731 SRA:SRR5111676 https://www.encodeproject.org/files/ENCFF002EGB/@@download/ENCFF002EGB.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFD/ released mild to moderate bottlenecking missing control alignments ENCFF737XWF bigWig fold change over control ENCSR494TDU ChIP-seq EFO:0002067 K562 cell line Homo sapiens NRF1-human ENCAB000BLM DNA False 2014-07-07 ENCODE 2 ENCFF051LWI, ENCFF724MBT 1220192943 ENCODE Processing Pipeline 0be611e4566afc81be28aa96e801e400 https://www.encodeproject.org/files/ENCFF737XWF/@@download/ENCFF737XWF.bigWig hg19 released mild to moderate bottlenecking missing control alignments ENCFF622TBV bigWig fold change over control ENCSR494TDU ChIP-seq EFO:0002067 K562 cell line Homo sapiens NRF1-human ENCAB000BLM DNA False 2014-07-07 ENCODE 1, 2 ENCFF051LWI, ENCFF581ZJL, ENCFF724MBT, ENCFF882JOI 1989901723 ENCODE Processing Pipeline 0cc740b876180cd8601c6384019846f3 https://www.encodeproject.org/files/ENCFF622TBV/@@download/ENCFF622TBV.bigWig hg19 released mild to moderate bottlenecking missing control alignments ENCFF312EZM bed narrowPeak peaks ENCSR494TDU ChIP-seq EFO:0002067 K562 cell line Homo sapiens NRF1-human ENCAB000BLM DNA False 2014-07-07 ENCODE 1 ENCFF581ZJL, ENCFF882JOI 6719059 ENCODE Processing Pipeline 71a739dae92c5ca03408ff454f3888de https://www.encodeproject.org/files/ENCFF312EZM/@@download/ENCFF312EZM.bed.gz hg19 released mild to moderate bottlenecking missing control alignments ENCFF477OCU bed narrowPeak peaks ENCSR494TDU ChIP-seq EFO:0002067 K562 cell line Homo sapiens NRF1-human ENCAB000BLM DNA False 2014-07-07 ENCODE 1, 2 ENCFF051LWI, ENCFF581ZJL, ENCFF724MBT, ENCFF882JOI 7173527 ENCODE Processing Pipeline 10fa05a4c4b4478b6214e169a15b4d44 https://www.encodeproject.org/files/ENCFF477OCU/@@download/ENCFF477OCU.bed.gz hg19 released mild to moderate bottlenecking missing control alignments ENCFF664XYL bigBed narrowPeak peaks ENCSR494TDU ChIP-seq EFO:0002067 K562 cell line Homo sapiens NRF1-human ENCAB000BLM DNA False 2014-07-07 ENCODE 1 ENCFF312EZM 13206988 ENCODE Processing Pipeline 1908084775180e2884ba0128ae3afb13 https://www.encodeproject.org/files/ENCFF664XYL/@@download/ENCFF664XYL.bigBed hg19 released mild to moderate bottlenecking missing control alignments ENCFF940NRT bed narrowPeak peaks ENCSR494TDU ChIP-seq EFO:0002067 K562 cell line Homo sapiens NRF1-human ENCAB000BLM DNA False 2014-07-07 ENCODE 2 ENCFF051LWI, ENCFF724MBT 7019893 ENCODE Processing Pipeline 5936d3a4c380f4b13628191fba4e233b https://www.encodeproject.org/files/ENCFF940NRT/@@download/ENCFF940NRT.bed.gz hg19 released mild to moderate bottlenecking missing control alignments ENCFF491ILO bigBed narrowPeak peaks ENCSR494TDU ChIP-seq EFO:0002067 K562 cell line Homo sapiens NRF1-human ENCAB000BLM DNA False 2014-07-07 ENCODE 2 ENCFF940NRT 13206565 ENCODE Processing Pipeline aca08d946ef27207c24654f3ca260a44 https://www.encodeproject.org/files/ENCFF491ILO/@@download/ENCFF491ILO.bigBed hg19 released mild to moderate bottlenecking missing control alignments ENCFF660MUZ bigBed narrowPeak peaks ENCSR494TDU ChIP-seq EFO:0002067 K562 cell line Homo sapiens NRF1-human ENCAB000BLM DNA False 2014-07-07 ENCODE 1, 2 ENCFF477OCU 13081550 ENCODE Processing Pipeline 6e8f7b136d27e1d0339b3efbd658ed0c https://www.encodeproject.org/files/ENCFF660MUZ/@@download/ENCFF660MUZ.bigBed hg19 released mild to moderate bottlenecking missing control alignments ENCFF450JCL bed narrowPeak conservative idr thresholded peaks ENCSR494TDU ChIP-seq EFO:0002067 K562 cell line Homo sapiens NRF1-human ENCAB000BLM DNA False 2014-07-07 ENCODE 1, 2 ENCFF001TDO, ENCFF312EZM, ENCFF477OCU, ENCFF940NRT 513204 ENCODE Processing Pipeline 273720f6f51bb9e0fac260fe814a05a1 https://www.encodeproject.org/files/ENCFF450JCL/@@download/ENCFF450JCL.bed.gz hg19 released mild to moderate bottlenecking missing control alignments ENCFF824PFM bigBed narrowPeak conservative idr thresholded peaks ENCSR494TDU ChIP-seq EFO:0002067 K562 cell line Homo sapiens NRF1-human ENCAB000BLM DNA False 2014-07-07 ENCODE 1, 2 ENCFF450JCL 978452 ENCODE Processing Pipeline 983a20cc330f38c26c58986c93a72a3f https://www.encodeproject.org/files/ENCFF824PFM/@@download/ENCFF824PFM.bigBed hg19 released mild to moderate bottlenecking missing control alignments ENCFF992QZV bed narrowPeak optimal idr thresholded peaks ENCSR494TDU ChIP-seq EFO:0002067 K562 cell line Homo sapiens NRF1-human ENCAB000BLM DNA False 2014-07-07 ENCODE 1, 2 ENCFF001TDO, ENCFF312EZM, ENCFF477OCU, ENCFF940NRT 622007 ENCODE Processing Pipeline abd4e1b435d690187f35c0bf71fe5cdb https://www.encodeproject.org/files/ENCFF992QZV/@@download/ENCFF992QZV.bed.gz hg19 released mild to moderate bottlenecking missing control alignments ENCFF043XYY bigBed narrowPeak optimal idr thresholded peaks ENCSR494TDU ChIP-seq EFO:0002067 K562 cell line Homo sapiens NRF1-human ENCAB000BLM DNA False 2014-07-07 ENCODE 1, 2 ENCFF992QZV 1143721 ENCODE Processing Pipeline 99f150ee7c04ec64e96f2c03805e47af https://www.encodeproject.org/files/ENCFF043XYY/@@download/ENCFF043XYY.bigBed hg19 released mild to moderate bottlenecking missing control alignments ENCFF724MBT bam alignments ENCSR494TDU ChIP-seq EFO:0002067 K562 cell line Homo sapiens NRF1-human ENCAB000BLM DNA False 2014-07-07 ENCODE 2 100 ENCFF002DPD, ENCFF002EGB, ENCFF807MUK 5029153075 ENCODE Processing Pipeline 0244313f5904123cbd50caae31b05d45 https://www.encodeproject.org/files/ENCFF724MBT/@@download/ENCFF724MBT.bam hg19 released mild to moderate bottlenecking missing control alignments ENCFF882JOI bam alignments ENCSR494TDU ChIP-seq EFO:0002067 K562 cell line Homo sapiens NRF1-human ENCAB000BLM DNA False 2014-07-07 ENCODE 1 100 ENCFF002DPB, ENCFF002DUE, ENCFF807MUK 3976683577 ENCODE Processing Pipeline 34813cfb66968d9a8c9f792dd834f542 https://www.encodeproject.org/files/ENCFF882JOI/@@download/ENCFF882JOI.bam hg19 released mild to moderate bottlenecking missing control alignments ENCFF707YQP bigWig signal p-value ENCSR494TDU ChIP-seq EFO:0002067 K562 cell line Homo sapiens NRF1-human ENCAB000BLM DNA False 2014-07-07 ENCODE 1 ENCFF581ZJL, ENCFF882JOI 1024925515 ENCODE Processing Pipeline a58115d16de1d4a50ab190cb49776e99 https://www.encodeproject.org/files/ENCFF707YQP/@@download/ENCFF707YQP.bigWig hg19 archived mild to moderate bottlenecking missing control alignments ENCFF136LMD bigWig signal p-value ENCSR494TDU ChIP-seq EFO:0002067 K562 cell line Homo sapiens NRF1-human ENCAB000BLM DNA False 2014-07-07 ENCODE 2 ENCFF051LWI, ENCFF724MBT 1256912391 ENCODE Processing Pipeline db92750d903ba7ee39039e13d242dff4 https://www.encodeproject.org/files/ENCFF136LMD/@@download/ENCFF136LMD.bigWig hg19 archived mild to moderate bottlenecking missing control alignments ENCFF290QSM bigWig signal p-value ENCSR494TDU ChIP-seq EFO:0002067 K562 cell line Homo sapiens NRF1-human ENCAB000BLM DNA False 2014-07-07 ENCODE 1, 2 ENCFF051LWI, ENCFF581ZJL, ENCFF724MBT, ENCFF882JOI 1406470435 ENCODE Processing Pipeline 680a1b7eee614d6d7d5039b1e5ac570c https://www.encodeproject.org/files/ENCFF290QSM/@@download/ENCFF290QSM.bigWig hg19 archived mild to moderate bottlenecking missing control alignments ENCFF055UKP bigWig fold change over control ENCSR494TDU ChIP-seq EFO:0002067 K562 cell line Homo sapiens NRF1-human ENCAB000BLM DNA False 2014-07-07 ENCODE 1 ENCFF581ZJL, ENCFF882JOI 993161669 ENCODE Processing Pipeline d6b64d5a520072e2cf46472b02ff5536 https://www.encodeproject.org/files/ENCFF055UKP/@@download/ENCFF055UKP.bigWig hg19 archived mild to moderate bottlenecking missing control alignments ENCFF221LXN bigWig fold change over control ENCSR494TDU ChIP-seq EFO:0002067 K562 cell line Homo sapiens NRF1-human ENCAB000BLM DNA False 2014-07-07 ENCODE 2 ENCFF051LWI, ENCFF724MBT 1222554789 ENCODE Processing Pipeline 7ade69126dfd23d1c80f6a92ee1509d0 https://www.encodeproject.org/files/ENCFF221LXN/@@download/ENCFF221LXN.bigWig hg19 archived mild to moderate bottlenecking missing control alignments ENCFF794VUJ bed narrowPeak peaks ENCSR494TDU ChIP-seq EFO:0002067 K562 cell line Homo sapiens NRF1-human ENCAB000BLM DNA False 2014-07-07 ENCODE 1 ENCFF581ZJL, ENCFF882JOI 6789866 ENCODE Processing Pipeline 235c938786e379e416bcee3bb756c555 https://www.encodeproject.org/files/ENCFF794VUJ/@@download/ENCFF794VUJ.bed.gz hg19 archived mild to moderate bottlenecking missing control alignments ENCFF731JDO bed narrowPeak peaks ENCSR494TDU ChIP-seq EFO:0002067 K562 cell line Homo sapiens NRF1-human ENCAB000BLM DNA False 2014-07-07 ENCODE 2 ENCFF051LWI, ENCFF724MBT 7095383 ENCODE Processing Pipeline c35cf7cbae9e72bc00e9688c8705e0b5 https://www.encodeproject.org/files/ENCFF731JDO/@@download/ENCFF731JDO.bed.gz hg19 archived mild to moderate bottlenecking missing control alignments ENCFF720BUE bigWig fold change over control ENCSR494TDU ChIP-seq EFO:0002067 K562 cell line Homo sapiens NRF1-human ENCAB000BLM DNA False 2014-07-07 ENCODE 1, 2 ENCFF051LWI, ENCFF581ZJL, ENCFF724MBT, ENCFF882JOI 1990596655 ENCODE Processing Pipeline 0c1f3a48c44255d8380cec8e85275451 https://www.encodeproject.org/files/ENCFF720BUE/@@download/ENCFF720BUE.bigWig hg19 archived mild to moderate bottlenecking missing control alignments ENCFF116JUN bed narrowPeak peaks ENCSR494TDU ChIP-seq EFO:0002067 K562 cell line Homo sapiens NRF1-human ENCAB000BLM DNA False 2014-07-07 ENCODE 1, 2 ENCFF051LWI, ENCFF581ZJL, ENCFF724MBT, ENCFF882JOI 7182225 ENCODE Processing Pipeline 26d260ae9ace801d7f8f70505b4ac162 https://www.encodeproject.org/files/ENCFF116JUN/@@download/ENCFF116JUN.bed.gz hg19 archived mild to moderate bottlenecking missing control alignments ENCFF520CLE bigBed narrowPeak peaks ENCSR494TDU ChIP-seq EFO:0002067 K562 cell line Homo sapiens NRF1-human ENCAB000BLM DNA False 2014-07-07 ENCODE 1 ENCFF794VUJ 13215499 ENCODE Processing Pipeline 59744a00f66ae5a955e23124d86959be https://www.encodeproject.org/files/ENCFF520CLE/@@download/ENCFF520CLE.bigBed hg19 archived mild to moderate bottlenecking missing control alignments ENCFF778HDU bigBed narrowPeak peaks ENCSR494TDU ChIP-seq EFO:0002067 K562 cell line Homo sapiens NRF1-human ENCAB000BLM DNA False 2014-07-07 ENCODE 1, 2 ENCFF116JUN 13082296 ENCODE Processing Pipeline 8992b649b80a00c54d4c040330bbae65 https://www.encodeproject.org/files/ENCFF778HDU/@@download/ENCFF778HDU.bigBed hg19 archived mild to moderate bottlenecking missing control alignments ENCFF804PKF bigBed narrowPeak peaks ENCSR494TDU ChIP-seq EFO:0002067 K562 cell line Homo sapiens NRF1-human ENCAB000BLM DNA False 2014-07-07 ENCODE 2 ENCFF731JDO 13216244 ENCODE Processing Pipeline 4b93039fc7cb713279e0eb65ac531fa8 https://www.encodeproject.org/files/ENCFF804PKF/@@download/ENCFF804PKF.bigBed hg19 archived mild to moderate bottlenecking missing control alignments ENCFF626MZK bam unfiltered alignments ENCSR494TDU ChIP-seq EFO:0002067 K562 cell line Homo sapiens NRF1-human ENCAB000BLM DNA False 2014-07-07 ENCODE 1 100 ENCFF002DPB, ENCFF002DUE, ENCFF643CGH 5034170891 ENCODE Processing Pipeline 3b6f9e6f7a8e91c3214755e3fed87ae0 https://www.encodeproject.org/files/ENCFF626MZK/@@download/ENCFF626MZK.bam GRCh38 released mild to moderate bottlenecking missing control alignments ENCFF763PNZ bam unfiltered alignments ENCSR494TDU ChIP-seq EFO:0002067 K562 cell line Homo sapiens NRF1-human ENCAB000BLM DNA False 2014-07-07 ENCODE 2 100 ENCFF002DPD, ENCFF002EGB, ENCFF643CGH 5831358024 ENCODE Processing Pipeline 3c652b6a9c15742296aa23332a47d703 https://www.encodeproject.org/files/ENCFF763PNZ/@@download/ENCFF763PNZ.bam GRCh38 released mild to moderate bottlenecking missing control alignments ENCFF337GMY bam alignments ENCSR494TDU ChIP-seq EFO:0002067 K562 cell line Homo sapiens NRF1-human ENCAB000BLM DNA False 2014-07-07 ENCODE 1 100 ENCFF002DPB, ENCFF002DUE, ENCFF643CGH 3978117933 ENCODE Processing Pipeline a6537270b82b3d47c526e9e4c3f846ad https://www.encodeproject.org/files/ENCFF337GMY/@@download/ENCFF337GMY.bam GRCh38 released mild to moderate bottlenecking missing control alignments ENCFF821HMU bam alignments ENCSR494TDU ChIP-seq EFO:0002067 K562 cell line Homo sapiens NRF1-human ENCAB000BLM DNA False 2014-07-07 ENCODE 2 100 ENCFF002DPD, ENCFF002EGB, ENCFF643CGH 5031741844 ENCODE Processing Pipeline 1ec56176feffb806d192d3cb4cdb0385 https://www.encodeproject.org/files/ENCFF821HMU/@@download/ENCFF821HMU.bam GRCh38 released mild to moderate bottlenecking missing control alignments ENCFF944FUT bigWig signal p-value ENCSR494TDU ChIP-seq EFO:0002067 K562 cell line Homo sapiens NRF1-human ENCAB000BLM DNA False 2014-07-07 ENCODE 1 ENCFF337GMY 975206621 ENCODE Processing Pipeline 28ccf8da360a8111fe5d6e31e6b33111 https://www.encodeproject.org/files/ENCFF944FUT/@@download/ENCFF944FUT.bigWig GRCh38 released mild to moderate bottlenecking missing control alignments ENCFF593PIB bigWig signal p-value ENCSR494TDU ChIP-seq EFO:0002067 K562 cell line Homo sapiens NRF1-human ENCAB000BLM DNA False 2014-07-07 ENCODE 2 ENCFF821HMU 1177490388 ENCODE Processing Pipeline c9e65ee790778a4a1c6407a1c514014d https://www.encodeproject.org/files/ENCFF593PIB/@@download/ENCFF593PIB.bigWig GRCh38 released mild to moderate bottlenecking missing control alignments ENCFF541DNK bigWig signal p-value ENCSR494TDU ChIP-seq EFO:0002067 K562 cell line Homo sapiens NRF1-human ENCAB000BLM DNA False 2014-07-07 ENCODE 1, 2 ENCFF337GMY, ENCFF821HMU 1432544317 ENCODE Processing Pipeline 631b6fee506610e4b7d543da160fa96c https://www.encodeproject.org/files/ENCFF541DNK/@@download/ENCFF541DNK.bigWig GRCh38 released mild to moderate bottlenecking missing control alignments ENCFF177ESL bigWig fold change over control ENCSR494TDU ChIP-seq EFO:0002067 K562 cell line Homo sapiens NRF1-human ENCAB000BLM DNA False 2014-07-07 ENCODE 1 ENCFF337GMY 989545833 ENCODE Processing Pipeline 699f0f387ee7ee4c0e1c67fd844ef150 https://www.encodeproject.org/files/ENCFF177ESL/@@download/ENCFF177ESL.bigWig GRCh38 released mild to moderate bottlenecking missing control alignments ENCFF009YZC bigWig fold change over control ENCSR494TDU ChIP-seq EFO:0002067 K562 cell line Homo sapiens NRF1-human ENCAB000BLM DNA False 2014-07-07 ENCODE 2 ENCFF821HMU 1222635336 ENCODE Processing Pipeline 942fb0b218c2adc645bb3cb03d210f52 https://www.encodeproject.org/files/ENCFF009YZC/@@download/ENCFF009YZC.bigWig GRCh38 released mild to moderate bottlenecking missing control alignments ENCFF458LDQ bigWig fold change over control ENCSR494TDU ChIP-seq EFO:0002067 K562 cell line Homo sapiens NRF1-human ENCAB000BLM DNA False 2014-07-07 ENCODE 1, 2 ENCFF337GMY, ENCFF821HMU 1984280745 ENCODE Processing Pipeline bd8b3ca7d47df5be44378d68ca3390d5 https://www.encodeproject.org/files/ENCFF458LDQ/@@download/ENCFF458LDQ.bigWig GRCh38 released mild to moderate bottlenecking missing control alignments ENCFF203LQZ bed narrowPeak peaks ENCSR494TDU ChIP-seq EFO:0002067 K562 cell line Homo sapiens NRF1-human ENCAB000BLM DNA False 2014-07-07 ENCODE 1 ENCFF337GMY 6694355 ENCODE Processing Pipeline 6c59a8dd3c781dd837f77a4acaf8de66 https://www.encodeproject.org/files/ENCFF203LQZ/@@download/ENCFF203LQZ.bed.gz GRCh38 released mild to moderate bottlenecking missing control alignments ENCFF108OPZ bed narrowPeak peaks ENCSR494TDU ChIP-seq EFO:0002067 K562 cell line Homo sapiens NRF1-human ENCAB000BLM DNA False 2014-07-07 ENCODE 2 ENCFF821HMU 6987127 ENCODE Processing Pipeline 311ca73985eaf262135fa6bfdacbc782 https://www.encodeproject.org/files/ENCFF108OPZ/@@download/ENCFF108OPZ.bed.gz GRCh38 released mild to moderate bottlenecking missing control alignments ENCFF535XLA bed narrowPeak peaks ENCSR494TDU ChIP-seq EFO:0002067 K562 cell line Homo sapiens NRF1-human ENCAB000BLM DNA False 2014-07-07 ENCODE 1, 2 ENCFF337GMY, ENCFF821HMU 7170867 ENCODE Processing Pipeline c39a1d202f0d89978725ae91400bb3e4 https://www.encodeproject.org/files/ENCFF535XLA/@@download/ENCFF535XLA.bed.gz GRCh38 released mild to moderate bottlenecking missing control alignments ENCFF810QQX bigBed narrowPeak peaks ENCSR494TDU ChIP-seq EFO:0002067 K562 cell line Homo sapiens NRF1-human ENCAB000BLM DNA False 2014-07-07 ENCODE 1 ENCFF203LQZ 13206328 ENCODE Processing Pipeline 0c6bd9d57739344b439997932e1675f5 https://www.encodeproject.org/files/ENCFF810QQX/@@download/ENCFF810QQX.bigBed GRCh38 released mild to moderate bottlenecking missing control alignments ENCFF482WBE bigBed narrowPeak peaks ENCSR494TDU ChIP-seq EFO:0002067 K562 cell line Homo sapiens NRF1-human ENCAB000BLM DNA False 2014-07-07 ENCODE 2 ENCFF108OPZ 13192888 ENCODE Processing Pipeline a8caefdb71ce4b33b72bf62ed0f5b3bc https://www.encodeproject.org/files/ENCFF482WBE/@@download/ENCFF482WBE.bigBed GRCh38 released mild to moderate bottlenecking missing control alignments ENCFF333DCJ bigBed narrowPeak peaks ENCSR494TDU ChIP-seq EFO:0002067 K562 cell line Homo sapiens NRF1-human ENCAB000BLM DNA False 2014-07-07 ENCODE 1, 2 ENCFF535XLA 13096342 ENCODE Processing Pipeline ec4b4410eaa90f9635fe79936b98e497 https://www.encodeproject.org/files/ENCFF333DCJ/@@download/ENCFF333DCJ.bigBed GRCh38 released mild to moderate bottlenecking missing control alignments ENCFF460GYT bed narrowPeak conservative idr thresholded peaks ENCSR494TDU ChIP-seq EFO:0002067 K562 cell line Homo sapiens NRF1-human ENCAB000BLM DNA False 2014-07-07 ENCODE 1, 2 ENCFF108OPZ, ENCFF203LQZ, ENCFF419RSJ, ENCFF535XLA 517105 ENCODE Processing Pipeline 226e8cfa8460f75225beeffe80341297 https://www.encodeproject.org/files/ENCFF460GYT/@@download/ENCFF460GYT.bed.gz GRCh38 released mild to moderate bottlenecking missing control alignments ENCFF650YRD bigBed narrowPeak conservative idr thresholded peaks ENCSR494TDU ChIP-seq EFO:0002067 K562 cell line Homo sapiens NRF1-human ENCAB000BLM DNA False 2014-07-07 ENCODE 1, 2 ENCFF460GYT 987767 ENCODE Processing Pipeline 1ffad225c545bc1367600d49701d7f15 https://www.encodeproject.org/files/ENCFF650YRD/@@download/ENCFF650YRD.bigBed GRCh38 released mild to moderate bottlenecking missing control alignments ENCFF905EQT bigBed narrowPeak optimal idr thresholded peaks ENCSR494TDU ChIP-seq EFO:0002067 K562 cell line Homo sapiens NRF1-human ENCAB000BLM DNA False 2014-07-07 ENCODE 1, 2 ENCFF543STN 1142367 ENCODE Processing Pipeline ca1a5cecd1ca1d52f0c16d532d546425 https://www.encodeproject.org/files/ENCFF905EQT/@@download/ENCFF905EQT.bigBed GRCh38 released mild to moderate bottlenecking missing control alignments ENCFF543STN bed narrowPeak optimal idr thresholded peaks ENCSR494TDU ChIP-seq EFO:0002067 K562 cell line Homo sapiens NRF1-human ENCAB000BLM DNA False 2014-07-07 ENCODE 1, 2 ENCFF108OPZ, ENCFF203LQZ, ENCFF419RSJ, ENCFF535XLA 617859 ENCODE Processing Pipeline a0c264cf57e6f232c64edeacf60a911a https://www.encodeproject.org/files/ENCFF543STN/@@download/ENCFF543STN.bed.gz GRCh38 released mild to moderate bottlenecking missing control alignments ENCFF431NKM bed narrowPeak conservative idr thresholded peaks ENCSR494TDU ChIP-seq EFO:0002067 K562 cell line Homo sapiens NRF1-human ENCAB000BLM DNA False 2014-07-07 ENCODE 1, 2 ENCFF001TDO, ENCFF116JUN, ENCFF731JDO, ENCFF794VUJ 453909 ENCODE Processing Pipeline 722ddcaa9d45655ee854d37daf3626ec https://www.encodeproject.org/files/ENCFF431NKM/@@download/ENCFF431NKM.bed.gz hg19 archived mild to moderate bottlenecking missing control alignments ENCFF142EOG bigBed narrowPeak conservative idr thresholded peaks ENCSR494TDU ChIP-seq EFO:0002067 K562 cell line Homo sapiens NRF1-human ENCAB000BLM DNA False 2014-07-07 ENCODE 1, 2 ENCFF431NKM 910960 ENCODE Processing Pipeline 1d481f31c66c4d50d7d7be3cb6246c81 https://www.encodeproject.org/files/ENCFF142EOG/@@download/ENCFF142EOG.bigBed hg19 archived mild to moderate bottlenecking missing control alignments ENCFF511MLB bigBed narrowPeak optimal idr thresholded peaks ENCSR494TDU ChIP-seq EFO:0002067 K562 cell line Homo sapiens NRF1-human ENCAB000BLM DNA False 2014-07-07 ENCODE 1, 2 ENCFF638YFC 1050672 ENCODE Processing Pipeline 51744712cc87cda4892ad63a015545b1 https://www.encodeproject.org/files/ENCFF511MLB/@@download/ENCFF511MLB.bigBed hg19 archived mild to moderate bottlenecking missing control alignments ENCFF638YFC bed narrowPeak optimal idr thresholded peaks ENCSR494TDU ChIP-seq EFO:0002067 K562 cell line Homo sapiens NRF1-human ENCAB000BLM DNA False 2014-07-07 ENCODE 1, 2 ENCFF001TDO, ENCFF116JUN, ENCFF731JDO, ENCFF794VUJ 549409 ENCODE Processing Pipeline 251eed7221822cb7a11fd6e446f1ffc8 https://www.encodeproject.org/files/ENCFF638YFC/@@download/ENCFF638YFC.bed.gz hg19 archived mild to moderate bottlenecking missing control alignments ENCFF001RUH fastq reads ENCSR000FCB ChIP-seq EFO:0002067 K562 cell line Homo sapiens MITF-human ENCAB000BSE DNA see document see document False 2014-07-07 ENCODE 2 1 50 single-ended 1480878217 Richard Myers, HAIB c16ac9408e33823e42fd1133fd2146c9 SRA:SRR5331591 https://www.encodeproject.org/files/ENCFF001RUH/@@download/ENCFF001RUH.fastq.gz Illumina HiSeq 2000 /files/ENCFF001RVO/ released low read depth, antibody characterized with exemption ENCFF001RUI fastq reads ENCSR000FCB ChIP-seq EFO:0002067 K562 cell line Homo sapiens MITF-human ENCAB000BSE DNA see document see document False 2014-07-07 ENCODE 1 1 50 single-ended 1559150340 Richard Myers, HAIB a600ab1dc96375bf2d7975dce928dc32 SRA:SRR5331590 https://www.encodeproject.org/files/ENCFF001RUI/@@download/ENCFF001RUI.fastq.gz Illumina HiSeq 2000 /files/ENCFF001RVP/ released low read depth, antibody characterized with exemption ENCFF427TQP bigWig fold change over control ENCSR000FCB ChIP-seq EFO:0002067 K562 cell line Homo sapiens MITF-human ENCAB000BSE DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF012IGR, ENCFF061QOJ, ENCFF527GGD, ENCFF578ISP 1271113685 ENCODE Processing Pipeline 4183f71156f0b6f997351f8f0d030019 https://www.encodeproject.org/files/ENCFF427TQP/@@download/ENCFF427TQP.bigWig hg19 released low read depth, antibody characterized with exemption ENCFF691MGC bigWig signal p-value ENCSR000FCB ChIP-seq EFO:0002067 K562 cell line Homo sapiens MITF-human ENCAB000BSE DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF012IGR, ENCFF061QOJ, ENCFF527GGD, ENCFF578ISP 1326771089 ENCODE Processing Pipeline e06d810716c9ed4897848e71bef2b1f3 https://www.encodeproject.org/files/ENCFF691MGC/@@download/ENCFF691MGC.bigWig hg19 released low read depth, antibody characterized with exemption ENCFF463AYG bam unfiltered alignments ENCSR000FCB ChIP-seq EFO:0002067 K562 cell line Homo sapiens MITF-human ENCAB000BSE DNA see document see document False 2014-07-07 ENCODE 2 50 ENCFF001RUH, ENCFF643CGH 1580201262 ENCODE Processing Pipeline a11fbc346a4fb63f033f628de065334f https://www.encodeproject.org/files/ENCFF463AYG/@@download/ENCFF463AYG.bam GRCh38 released low read depth, antibody characterized with exemption ENCFF735PTW bam unfiltered alignments ENCSR000FCB ChIP-seq EFO:0002067 K562 cell line Homo sapiens MITF-human ENCAB000BSE DNA see document see document False 2014-07-07 ENCODE 1 50 ENCFF001RUI, ENCFF643CGH 1674219884 ENCODE Processing Pipeline 9862a7eb37a6af23a0334ce1e5d30270 https://www.encodeproject.org/files/ENCFF735PTW/@@download/ENCFF735PTW.bam GRCh38 released low read depth, antibody characterized with exemption ENCFF677BBS bam alignments ENCSR000FCB ChIP-seq EFO:0002067 K562 cell line Homo sapiens MITF-human ENCAB000BSE DNA see document see document False 2014-07-07 ENCODE 1 50 ENCFF001RUI, ENCFF643CGH 1241088305 ENCODE Processing Pipeline 128e9cfe034d16507d3bc51c92cd3771 https://www.encodeproject.org/files/ENCFF677BBS/@@download/ENCFF677BBS.bam GRCh38 released low read depth, antibody characterized with exemption ENCFF983RUX bam alignments ENCSR000FCB ChIP-seq EFO:0002067 K562 cell line Homo sapiens MITF-human ENCAB000BSE DNA see document see document False 2014-07-07 ENCODE 2 50 ENCFF001RUH, ENCFF643CGH 1153392054 ENCODE Processing Pipeline b73068fdac151ee94d27a4e009b927e8 https://www.encodeproject.org/files/ENCFF983RUX/@@download/ENCFF983RUX.bam GRCh38 released low read depth, antibody characterized with exemption ENCFF437KWO bigWig signal p-value ENCSR000FCB ChIP-seq EFO:0002067 K562 cell line Homo sapiens MITF-human ENCAB000BSE DNA see document see document False 2014-07-07 ENCODE 1 ENCFF121DUE, ENCFF677BBS 876281877 ENCODE Processing Pipeline 07928b239ae8ef985e58b1844f0f176b https://www.encodeproject.org/files/ENCFF437KWO/@@download/ENCFF437KWO.bigWig GRCh38 released low read depth, antibody characterized with exemption ENCFF781GHU bigWig signal p-value ENCSR000FCB ChIP-seq EFO:0002067 K562 cell line Homo sapiens MITF-human ENCAB000BSE DNA see document see document False 2014-07-07 ENCODE 2 ENCFF332SVJ, ENCFF983RUX 693545852 ENCODE Processing Pipeline 02f790212fc1d754d28b90292fb07bd2 https://www.encodeproject.org/files/ENCFF781GHU/@@download/ENCFF781GHU.bigWig GRCh38 released low read depth, antibody characterized with exemption ENCFF455FBB bigWig signal p-value ENCSR000FCB ChIP-seq EFO:0002067 K562 cell line Homo sapiens MITF-human ENCAB000BSE DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF121DUE, ENCFF332SVJ, ENCFF677BBS, ENCFF983RUX 1280583447 ENCODE Processing Pipeline ea1a39af7374eb130685dca3d2523518 https://www.encodeproject.org/files/ENCFF455FBB/@@download/ENCFF455FBB.bigWig GRCh38 released low read depth, antibody characterized with exemption ENCFF492JGM bigWig fold change over control ENCSR000FCB ChIP-seq EFO:0002067 K562 cell line Homo sapiens MITF-human ENCAB000BSE DNA see document see document False 2014-07-07 ENCODE 1 ENCFF121DUE, ENCFF677BBS 596686013 ENCODE Processing Pipeline b3bef352044217ccce0ccb21c6e5fabf https://www.encodeproject.org/files/ENCFF492JGM/@@download/ENCFF492JGM.bigWig GRCh38 released low read depth, antibody characterized with exemption ENCFF527LDL bigWig fold change over control ENCSR000FCB ChIP-seq EFO:0002067 K562 cell line Homo sapiens MITF-human ENCAB000BSE DNA see document see document False 2014-07-07 ENCODE 2 ENCFF332SVJ, ENCFF983RUX 522924648 ENCODE Processing Pipeline 603b68da5cf3f4330667578710605810 https://www.encodeproject.org/files/ENCFF527LDL/@@download/ENCFF527LDL.bigWig GRCh38 released low read depth, antibody characterized with exemption ENCFF442BPG bigWig fold change over control ENCSR000FCB ChIP-seq EFO:0002067 K562 cell line Homo sapiens MITF-human ENCAB000BSE DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF121DUE, ENCFF332SVJ, ENCFF677BBS, ENCFF983RUX 1248418248 ENCODE Processing Pipeline ff18c6f8ab9e706c0bf0f6b3288be34f https://www.encodeproject.org/files/ENCFF442BPG/@@download/ENCFF442BPG.bigWig GRCh38 released low read depth, antibody characterized with exemption ENCFF823BLX bigBed narrowPeak peaks ENCSR000FCB ChIP-seq EFO:0002067 K562 cell line Homo sapiens MITF-human ENCAB000BSE DNA see document see document False 2014-07-07 ENCODE 1 ENCFF933RQE 11175202 ENCODE Processing Pipeline 9e7a8e1da9883b8bb53bf68fa116a3c4 https://www.encodeproject.org/files/ENCFF823BLX/@@download/ENCFF823BLX.bigBed GRCh38 released low read depth, antibody characterized with exemption ENCFF090LNP bigBed narrowPeak peaks ENCSR000FCB ChIP-seq EFO:0002067 K562 cell line Homo sapiens MITF-human ENCAB000BSE DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF775JQN 11405699 ENCODE Processing Pipeline 8488f0af981670730ac7c2f787c36097 https://www.encodeproject.org/files/ENCFF090LNP/@@download/ENCFF090LNP.bigBed GRCh38 released low read depth, antibody characterized with exemption ENCFF692UXG bed narrowPeak peaks ENCSR000FCB ChIP-seq EFO:0002067 K562 cell line Homo sapiens MITF-human ENCAB000BSE DNA see document see document False 2014-07-07 ENCODE 2 ENCFF332SVJ, ENCFF983RUX 5096786 ENCODE Processing Pipeline f99d7704310b119804fde0f9e66e8957 https://www.encodeproject.org/files/ENCFF692UXG/@@download/ENCFF692UXG.bed.gz GRCh38 released low read depth, antibody characterized with exemption ENCFF933RQE bed narrowPeak peaks ENCSR000FCB ChIP-seq EFO:0002067 K562 cell line Homo sapiens MITF-human ENCAB000BSE DNA see document see document False 2014-07-07 ENCODE 1 ENCFF121DUE, ENCFF677BBS 5145493 ENCODE Processing Pipeline 11a191ad1719dfa3fd71f2ae995cf63c https://www.encodeproject.org/files/ENCFF933RQE/@@download/ENCFF933RQE.bed.gz GRCh38 released low read depth, antibody characterized with exemption ENCFF775JQN bed narrowPeak peaks ENCSR000FCB ChIP-seq EFO:0002067 K562 cell line Homo sapiens MITF-human ENCAB000BSE DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF121DUE, ENCFF332SVJ, ENCFF677BBS, ENCFF983RUX 6525116 ENCODE Processing Pipeline 319a5a7cf20096c69ee770664e2d48b4 https://www.encodeproject.org/files/ENCFF775JQN/@@download/ENCFF775JQN.bed.gz GRCh38 released low read depth, antibody characterized with exemption ENCFF761BJK bigBed narrowPeak peaks ENCSR000FCB ChIP-seq EFO:0002067 K562 cell line Homo sapiens MITF-human ENCAB000BSE DNA see document see document False 2014-07-07 ENCODE 2 ENCFF692UXG 11058907 ENCODE Processing Pipeline 9d6f1dceee888637d7e958cd3fb0a0b3 https://www.encodeproject.org/files/ENCFF761BJK/@@download/ENCFF761BJK.bigBed GRCh38 released low read depth, antibody characterized with exemption ENCFF830UEH bed narrowPeak conservative idr thresholded peaks ENCSR000FCB ChIP-seq EFO:0002067 K562 cell line Homo sapiens MITF-human ENCAB000BSE DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF419RSJ, ENCFF692UXG, ENCFF775JQN, ENCFF933RQE 120652 ENCODE Processing Pipeline fa200eedc4e96c25daeacf1ebc412940 https://www.encodeproject.org/files/ENCFF830UEH/@@download/ENCFF830UEH.bed.gz GRCh38 released low read depth, antibody characterized with exemption ENCFF071NYD bed narrowPeak optimal idr thresholded peaks ENCSR000FCB ChIP-seq EFO:0002067 K562 cell line Homo sapiens MITF-human ENCAB000BSE DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF419RSJ, ENCFF692UXG, ENCFF775JQN, ENCFF933RQE 138537 ENCODE Processing Pipeline 529e27cb03d15bfeee667ecbcfc0a4bf https://www.encodeproject.org/files/ENCFF071NYD/@@download/ENCFF071NYD.bed.gz GRCh38 released low read depth, antibody characterized with exemption ENCFF347CNP bigBed narrowPeak conservative idr thresholded peaks ENCSR000FCB ChIP-seq EFO:0002067 K562 cell line Homo sapiens MITF-human ENCAB000BSE DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF830UEH 237762 ENCODE Processing Pipeline a35beccaad4e4ce20fde0c2fbcd61494 https://www.encodeproject.org/files/ENCFF347CNP/@@download/ENCFF347CNP.bigBed GRCh38 released low read depth, antibody characterized with exemption ENCFF193HSB bigBed narrowPeak optimal idr thresholded peaks ENCSR000FCB ChIP-seq EFO:0002067 K562 cell line Homo sapiens MITF-human ENCAB000BSE DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF071NYD 315803 ENCODE Processing Pipeline 46061efbc875c61cac9d2d6b85f75e6b https://www.encodeproject.org/files/ENCFF193HSB/@@download/ENCFF193HSB.bigBed GRCh38 released low read depth, antibody characterized with exemption ENCFF502SWV bam unfiltered alignments ENCSR000FCB ChIP-seq EFO:0002067 K562 cell line Homo sapiens MITF-human ENCAB000BSE DNA see document see document False 2014-07-07 ENCODE 1 50 ENCFF001RUI, ENCFF807MUK 1670536675 ENCODE Processing Pipeline 549755219aa5a2bed27a27a7d5f19e8c https://www.encodeproject.org/files/ENCFF502SWV/@@download/ENCFF502SWV.bam hg19 released low read depth, antibody characterized with exemption ENCFF012IGR bam alignments ENCSR000FCB ChIP-seq EFO:0002067 K562 cell line Homo sapiens MITF-human ENCAB000BSE DNA see document see document False 2014-07-07 ENCODE 1 50 ENCFF001RUI, ENCFF807MUK 1241523705 ENCODE Processing Pipeline d0bf75cc52f6b6a559a482c3c7ea2334 https://www.encodeproject.org/files/ENCFF012IGR/@@download/ENCFF012IGR.bam hg19 released low read depth, antibody characterized with exemption ENCFF077BCA bam unfiltered alignments ENCSR000FCB ChIP-seq EFO:0002067 K562 cell line Homo sapiens MITF-human ENCAB000BSE DNA see document see document False 2014-07-07 ENCODE 2 50 ENCFF001RUH, ENCFF807MUK 1577181969 ENCODE Processing Pipeline 49b2276076f7c8139a884cef523c7932 https://www.encodeproject.org/files/ENCFF077BCA/@@download/ENCFF077BCA.bam hg19 released low read depth, antibody characterized with exemption ENCFF527GGD bam alignments ENCSR000FCB ChIP-seq EFO:0002067 K562 cell line Homo sapiens MITF-human ENCAB000BSE DNA see document see document False 2014-07-07 ENCODE 2 50 ENCFF001RUH, ENCFF807MUK 1153861968 ENCODE Processing Pipeline 51288055255fa5fef100954b6c5f43bc https://www.encodeproject.org/files/ENCFF527GGD/@@download/ENCFF527GGD.bam hg19 released low read depth, antibody characterized with exemption ENCFF304WLL bigWig fold change over control ENCSR000FCB ChIP-seq EFO:0002067 K562 cell line Homo sapiens MITF-human ENCAB000BSE DNA see document see document False 2014-07-07 ENCODE 1 ENCFF012IGR, ENCFF578ISP 598239403 ENCODE Processing Pipeline 908b6c890deb2fb0cffe4d8686b568b7 https://www.encodeproject.org/files/ENCFF304WLL/@@download/ENCFF304WLL.bigWig hg19 released low read depth, antibody characterized with exemption ENCFF616LVN bed narrowPeak optimal idr thresholded peaks ENCSR000FCB ChIP-seq EFO:0002067 K562 cell line Homo sapiens MITF-human ENCAB000BSE DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF001TDO, ENCFF175RNO, ENCFF373SQY, ENCFF472YHR 130606 ENCODE Processing Pipeline b10e96e443b6ef583669219f71f72a11 https://www.encodeproject.org/files/ENCFF616LVN/@@download/ENCFF616LVN.bed.gz hg19 released low read depth, antibody characterized with exemption ENCFF582FUR bigWig fold change over control ENCSR000FCB ChIP-seq EFO:0002067 K562 cell line Homo sapiens MITF-human ENCAB000BSE DNA see document see document False 2014-07-07 ENCODE 2 ENCFF061QOJ, ENCFF527GGD 539880543 ENCODE Processing Pipeline e15ec4b52583c7ca5006c5935c1eb2cb https://www.encodeproject.org/files/ENCFF582FUR/@@download/ENCFF582FUR.bigWig hg19 released low read depth, antibody characterized with exemption ENCFF175RNO bed narrowPeak peaks ENCSR000FCB ChIP-seq EFO:0002067 K562 cell line Homo sapiens MITF-human ENCAB000BSE DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF012IGR, ENCFF061QOJ, ENCFF527GGD, ENCFF578ISP 6524209 ENCODE Processing Pipeline b006770fcaf5952edc18c06c66e6941d https://www.encodeproject.org/files/ENCFF175RNO/@@download/ENCFF175RNO.bed.gz hg19 released low read depth, antibody characterized with exemption ENCFF112FJR bigWig signal p-value ENCSR000FCB ChIP-seq EFO:0002067 K562 cell line Homo sapiens MITF-human ENCAB000BSE DNA see document see document False 2014-07-07 ENCODE 2 ENCFF061QOJ, ENCFF527GGD 709555043 ENCODE Processing Pipeline 43e0e9a187a250f4e717d54107303333 https://www.encodeproject.org/files/ENCFF112FJR/@@download/ENCFF112FJR.bigWig hg19 released low read depth, antibody characterized with exemption ENCFF472YHR bed narrowPeak peaks ENCSR000FCB ChIP-seq EFO:0002067 K562 cell line Homo sapiens MITF-human ENCAB000BSE DNA see document see document False 2014-07-07 ENCODE 2 ENCFF061QOJ, ENCFF527GGD 5360673 ENCODE Processing Pipeline 3eef564b1fbc3ea5f95219df16d69765 https://www.encodeproject.org/files/ENCFF472YHR/@@download/ENCFF472YHR.bed.gz hg19 released low read depth, antibody characterized with exemption ENCFF050UWJ bigWig signal p-value ENCSR000FCB ChIP-seq EFO:0002067 K562 cell line Homo sapiens MITF-human ENCAB000BSE DNA see document see document False 2014-07-07 ENCODE 1 ENCFF012IGR, ENCFF578ISP 750447473 ENCODE Processing Pipeline 93d15c598714406e3247892b19ae6761 https://www.encodeproject.org/files/ENCFF050UWJ/@@download/ENCFF050UWJ.bigWig hg19 released low read depth, antibody characterized with exemption ENCFF224CHN bigBed narrowPeak peaks ENCSR000FCB ChIP-seq EFO:0002067 K562 cell line Homo sapiens MITF-human ENCAB000BSE DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF175RNO 11375341 ENCODE Processing Pipeline 33dc80308193c77e6a927de63232d665 https://www.encodeproject.org/files/ENCFF224CHN/@@download/ENCFF224CHN.bigBed hg19 released low read depth, antibody characterized with exemption ENCFF373SQY bed narrowPeak peaks ENCSR000FCB ChIP-seq EFO:0002067 K562 cell line Homo sapiens MITF-human ENCAB000BSE DNA see document see document False 2014-07-07 ENCODE 1 ENCFF012IGR, ENCFF578ISP 5147423 ENCODE Processing Pipeline 73a37eb0fe3c63684da32b63ebfb2efc https://www.encodeproject.org/files/ENCFF373SQY/@@download/ENCFF373SQY.bed.gz hg19 released low read depth, antibody characterized with exemption ENCFF195WNG bigBed narrowPeak peaks ENCSR000FCB ChIP-seq EFO:0002067 K562 cell line Homo sapiens MITF-human ENCAB000BSE DNA see document see document False 2014-07-07 ENCODE 1 ENCFF373SQY 11165611 ENCODE Processing Pipeline f3289bde1ead8c68ab625703685a3933 https://www.encodeproject.org/files/ENCFF195WNG/@@download/ENCFF195WNG.bigBed hg19 released low read depth, antibody characterized with exemption ENCFF096AYG bigBed narrowPeak optimal idr thresholded peaks ENCSR000FCB ChIP-seq EFO:0002067 K562 cell line Homo sapiens MITF-human ENCAB000BSE DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF616LVN 304039 ENCODE Processing Pipeline 65692d0dc56d49712deb42385bb02430 https://www.encodeproject.org/files/ENCFF096AYG/@@download/ENCFF096AYG.bigBed hg19 released low read depth, antibody characterized with exemption ENCFF954ZEK bigBed narrowPeak peaks ENCSR000FCB ChIP-seq EFO:0002067 K562 cell line Homo sapiens MITF-human ENCAB000BSE DNA see document see document False 2014-07-07 ENCODE 2 ENCFF472YHR 11130941 ENCODE Processing Pipeline 63f561601a41a675e7f18e13f8470b7e https://www.encodeproject.org/files/ENCFF954ZEK/@@download/ENCFF954ZEK.bigBed hg19 released low read depth, antibody characterized with exemption ENCFF522LWR bed narrowPeak conservative idr thresholded peaks ENCSR000FCB ChIP-seq EFO:0002067 K562 cell line Homo sapiens MITF-human ENCAB000BSE DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF001TDO, ENCFF175RNO, ENCFF373SQY, ENCFF472YHR 116149 ENCODE Processing Pipeline 834438d958584db57bb090e19d02c420 https://www.encodeproject.org/files/ENCFF522LWR/@@download/ENCFF522LWR.bed.gz hg19 released low read depth, antibody characterized with exemption ENCFF272SYB bigBed narrowPeak conservative idr thresholded peaks ENCSR000FCB ChIP-seq EFO:0002067 K562 cell line Homo sapiens MITF-human ENCAB000BSE DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF522LWR 230652 ENCODE Processing Pipeline 03f1a0cf9f019abdaddbab48a0740ef9 https://www.encodeproject.org/files/ENCFF272SYB/@@download/ENCFF272SYB.bigBed hg19 released low read depth, antibody characterized with exemption ENCFF450IGI bam unfiltered alignments ENCSR888XZK ChIP-seq EFO:0002067 K562 cell line Homo sapiens TCF7L2-human ENCAB000BED DNA False 2016-07-28 ENCODE 1 36 ENCFF002EWU, ENCFF807MUK 1381717984 ENCODE Processing Pipeline d541581af992828d02641863691ca12f https://www.encodeproject.org/files/ENCFF450IGI/@@download/ENCFF450IGI.bam hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF593UQX bam unfiltered alignments ENCSR888XZK ChIP-seq EFO:0002067 K562 cell line Homo sapiens TCF7L2-human ENCAB000BED DNA False 2016-07-28 ENCODE 2 36 ENCFF002EWK, ENCFF807MUK 1145497486 ENCODE Processing Pipeline 7d3ac2a9efa568a9abc63c3d921a2b23 https://www.encodeproject.org/files/ENCFF593UQX/@@download/ENCFF593UQX.bam hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF002EWK fastq reads ENCSR888XZK ChIP-seq EFO:0002067 K562 cell line Homo sapiens TCF7L2-human ENCAB000BED DNA False 2016-07-28 ENCODE 2 1 36 single-ended 849445816 Michael Snyder, Stanford ff4af7a3b8eb65603546dcd7cfb1b6c4 SRA:SRR5112216 https://www.encodeproject.org/files/ENCFF002EWK/@@download/ENCFF002EWK.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF002ECS/ released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF002EWU fastq reads ENCSR888XZK ChIP-seq EFO:0002067 K562 cell line Homo sapiens TCF7L2-human ENCAB000BED DNA False 2016-07-28 ENCODE 1 1 36 single-ended 1074387966 Michael Snyder, Stanford 8177a8ff55fba1c36b1ce2133fb4d25f SRA:SRR5112215 https://www.encodeproject.org/files/ENCFF002EWU/@@download/ENCFF002EWU.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF002ECW/ released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF833DBR bam alignments ENCSR888XZK ChIP-seq EFO:0002067 K562 cell line Homo sapiens TCF7L2-human ENCAB000BED DNA False 2016-07-28 ENCODE 1 36 ENCFF002EWU, ENCFF807MUK 663405732 ENCODE Processing Pipeline 89b4f9ecac3017fb913b29765e8370ef https://www.encodeproject.org/files/ENCFF833DBR/@@download/ENCFF833DBR.bam hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF508MJP bam alignments ENCSR888XZK ChIP-seq EFO:0002067 K562 cell line Homo sapiens TCF7L2-human ENCAB000BED DNA False 2016-07-28 ENCODE 2 36 ENCFF002EWK, ENCFF807MUK 659820289 ENCODE Processing Pipeline db2ca2eeb841c2ec5565a743ec168037 https://www.encodeproject.org/files/ENCFF508MJP/@@download/ENCFF508MJP.bam hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF201BSI bigWig signal p-value ENCSR888XZK ChIP-seq EFO:0002067 K562 cell line Homo sapiens TCF7L2-human ENCAB000BED DNA False 2016-07-28 ENCODE 2 ENCFF508MJP, ENCFF879OQC 478461304 ENCODE Processing Pipeline 41a8ac263b179ed5379b63915bba773b https://www.encodeproject.org/files/ENCFF201BSI/@@download/ENCFF201BSI.bigWig hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF557EAW bigWig fold change over control ENCSR888XZK ChIP-seq EFO:0002067 K562 cell line Homo sapiens TCF7L2-human ENCAB000BED DNA False 2016-07-28 ENCODE 1 ENCFF335IPE, ENCFF833DBR 377324711 ENCODE Processing Pipeline 4de0c74a35a10942cb77ba7011b70894 https://www.encodeproject.org/files/ENCFF557EAW/@@download/ENCFF557EAW.bigWig hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF654ZBD bigBed narrowPeak peaks ENCSR888XZK ChIP-seq EFO:0002067 K562 cell line Homo sapiens TCF7L2-human ENCAB000BED DNA False 2016-07-28 ENCODE 1, 2 ENCFF975NRI 11378032 ENCODE Processing Pipeline dd1eeec7de7234e4d35caf8d7f2b4b7b https://www.encodeproject.org/files/ENCFF654ZBD/@@download/ENCFF654ZBD.bigBed hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF017KAL bigWig fold change over control ENCSR888XZK ChIP-seq EFO:0002067 K562 cell line Homo sapiens TCF7L2-human ENCAB000BED DNA False 2016-07-28 ENCODE 2 ENCFF508MJP, ENCFF879OQC 391568550 ENCODE Processing Pipeline 841581c0da965dd3d03e2411766221a9 https://www.encodeproject.org/files/ENCFF017KAL/@@download/ENCFF017KAL.bigWig hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF060XZX bed narrowPeak peaks ENCSR888XZK ChIP-seq EFO:0002067 K562 cell line Homo sapiens TCF7L2-human ENCAB000BED DNA False 2016-07-28 ENCODE 1 ENCFF335IPE, ENCFF833DBR 4381264 ENCODE Processing Pipeline 383e6889efb44997cec370ab5d17c325 https://www.encodeproject.org/files/ENCFF060XZX/@@download/ENCFF060XZX.bed.gz hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF822PNV bigBed narrowPeak peaks ENCSR888XZK ChIP-seq EFO:0002067 K562 cell line Homo sapiens TCF7L2-human ENCAB000BED DNA False 2016-07-28 ENCODE 2 ENCFF274DVQ 10820118 ENCODE Processing Pipeline c1900607041e0fe601846222aa8dc45f https://www.encodeproject.org/files/ENCFF822PNV/@@download/ENCFF822PNV.bigBed hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF945XNU bigWig signal p-value ENCSR888XZK ChIP-seq EFO:0002067 K562 cell line Homo sapiens TCF7L2-human ENCAB000BED DNA False 2016-07-28 ENCODE 1 ENCFF335IPE, ENCFF833DBR 545967874 ENCODE Processing Pipeline 945495b7b7a0cb80475b721d6d3ca0f7 https://www.encodeproject.org/files/ENCFF945XNU/@@download/ENCFF945XNU.bigWig hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF899DYD bigWig fold change over control ENCSR888XZK ChIP-seq EFO:0002067 K562 cell line Homo sapiens TCF7L2-human ENCAB000BED DNA False 2016-07-28 ENCODE 1, 2 ENCFF335IPE, ENCFF508MJP, ENCFF833DBR, ENCFF879OQC 876928090 ENCODE Processing Pipeline d3e335680389f41842fff8487301a1ec https://www.encodeproject.org/files/ENCFF899DYD/@@download/ENCFF899DYD.bigWig hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF030ITT bigWig signal p-value ENCSR888XZK ChIP-seq EFO:0002067 K562 cell line Homo sapiens TCF7L2-human ENCAB000BED DNA False 2016-07-28 ENCODE 1, 2 ENCFF335IPE, ENCFF508MJP, ENCFF833DBR, ENCFF879OQC 979975194 ENCODE Processing Pipeline a940dfe10860f6b28d9761495dfd4d68 https://www.encodeproject.org/files/ENCFF030ITT/@@download/ENCFF030ITT.bigWig hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF274DVQ bed narrowPeak peaks ENCSR888XZK ChIP-seq EFO:0002067 K562 cell line Homo sapiens TCF7L2-human ENCAB000BED DNA False 2016-07-28 ENCODE 2 ENCFF508MJP, ENCFF879OQC 4527559 ENCODE Processing Pipeline 989e63de6058c49c3266aaa1f69937d1 https://www.encodeproject.org/files/ENCFF274DVQ/@@download/ENCFF274DVQ.bed.gz hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF975NRI bed narrowPeak peaks ENCSR888XZK ChIP-seq EFO:0002067 K562 cell line Homo sapiens TCF7L2-human ENCAB000BED DNA False 2016-07-28 ENCODE 1, 2 ENCFF335IPE, ENCFF508MJP, ENCFF833DBR, ENCFF879OQC 6063898 ENCODE Processing Pipeline c2192e723f27a63840455d5300ad9609 https://www.encodeproject.org/files/ENCFF975NRI/@@download/ENCFF975NRI.bed.gz hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF538CGA bigBed narrowPeak peaks ENCSR888XZK ChIP-seq EFO:0002067 K562 cell line Homo sapiens TCF7L2-human ENCAB000BED DNA False 2016-07-28 ENCODE 1 ENCFF060XZX 10913572 ENCODE Processing Pipeline e1b85e0218528e92b97edc9499a74c67 https://www.encodeproject.org/files/ENCFF538CGA/@@download/ENCFF538CGA.bigBed hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF127SRR bam unfiltered alignments ENCSR888XZK ChIP-seq EFO:0002067 K562 cell line Homo sapiens TCF7L2-human ENCAB000BED DNA False 2016-07-28 ENCODE 2 36 ENCFF002EWK, ENCFF643CGH 1149584453 ENCODE Processing Pipeline cabbb4c9ad5e33251589bcd6801e0344 https://www.encodeproject.org/files/ENCFF127SRR/@@download/ENCFF127SRR.bam GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF362LTA bam unfiltered alignments ENCSR888XZK ChIP-seq EFO:0002067 K562 cell line Homo sapiens TCF7L2-human ENCAB000BED DNA False 2016-07-28 ENCODE 1 36 ENCFF002EWU, ENCFF643CGH 1388102453 ENCODE Processing Pipeline cfc209ab79e6a9667b635558bd0e49ee https://www.encodeproject.org/files/ENCFF362LTA/@@download/ENCFF362LTA.bam GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF600TNR bam alignments ENCSR888XZK ChIP-seq EFO:0002067 K562 cell line Homo sapiens TCF7L2-human ENCAB000BED DNA False 2016-07-28 ENCODE 2 36 ENCFF002EWK, ENCFF643CGH 659318280 ENCODE Processing Pipeline c126ef10ab0984c843064efc6ba924db https://www.encodeproject.org/files/ENCFF600TNR/@@download/ENCFF600TNR.bam GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF425MJK bam alignments ENCSR888XZK ChIP-seq EFO:0002067 K562 cell line Homo sapiens TCF7L2-human ENCAB000BED DNA False 2016-07-28 ENCODE 1 36 ENCFF002EWU, ENCFF643CGH 662948297 ENCODE Processing Pipeline deccb465d3f76ffa97c134d1644f08c4 https://www.encodeproject.org/files/ENCFF425MJK/@@download/ENCFF425MJK.bam GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF869XTK bigWig signal p-value ENCSR888XZK ChIP-seq EFO:0002067 K562 cell line Homo sapiens TCF7L2-human ENCAB000BED DNA False 2016-07-28 ENCODE 1 ENCFF156FED, ENCFF425MJK 446184303 ENCODE Processing Pipeline 456dcfab3eece8c0eaa592c26469f287 https://www.encodeproject.org/files/ENCFF869XTK/@@download/ENCFF869XTK.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF922QUH bigWig signal p-value ENCSR888XZK ChIP-seq EFO:0002067 K562 cell line Homo sapiens TCF7L2-human ENCAB000BED DNA False 2016-07-28 ENCODE 2 ENCFF577FNG, ENCFF600TNR 554373773 ENCODE Processing Pipeline 391fb71dd5f889f357311a210db213cb https://www.encodeproject.org/files/ENCFF922QUH/@@download/ENCFF922QUH.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF560CZE bigWig signal p-value ENCSR888XZK ChIP-seq EFO:0002067 K562 cell line Homo sapiens TCF7L2-human ENCAB000BED DNA False 2016-07-28 ENCODE 1, 2 ENCFF156FED, ENCFF425MJK, ENCFF577FNG, ENCFF600TNR 911759717 ENCODE Processing Pipeline 4185da4f50ada55f71f68faca5299c56 https://www.encodeproject.org/files/ENCFF560CZE/@@download/ENCFF560CZE.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF007APW bigWig fold change over control ENCSR888XZK ChIP-seq EFO:0002067 K562 cell line Homo sapiens TCF7L2-human ENCAB000BED DNA False 2016-07-28 ENCODE 1 ENCFF156FED, ENCFF425MJK 379208307 ENCODE Processing Pipeline b8402557fd94edeb339787a98e0d21c6 https://www.encodeproject.org/files/ENCFF007APW/@@download/ENCFF007APW.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF538PPP bigWig fold change over control ENCSR888XZK ChIP-seq EFO:0002067 K562 cell line Homo sapiens TCF7L2-human ENCAB000BED DNA False 2016-07-28 ENCODE 2 ENCFF577FNG, ENCFF600TNR 391428704 ENCODE Processing Pipeline a12ccfc0b37beca656c3a97994404024 https://www.encodeproject.org/files/ENCFF538PPP/@@download/ENCFF538PPP.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF491WEL bigWig fold change over control ENCSR888XZK ChIP-seq EFO:0002067 K562 cell line Homo sapiens TCF7L2-human ENCAB000BED DNA False 2016-07-28 ENCODE 1, 2 ENCFF156FED, ENCFF425MJK, ENCFF577FNG, ENCFF600TNR 877287701 ENCODE Processing Pipeline ea140b1ce48b3003256ab6a2130578c3 https://www.encodeproject.org/files/ENCFF491WEL/@@download/ENCFF491WEL.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF635SZW bed narrowPeak peaks ENCSR888XZK ChIP-seq EFO:0002067 K562 cell line Homo sapiens TCF7L2-human ENCAB000BED DNA False 2016-07-28 ENCODE 1 ENCFF156FED, ENCFF425MJK 4074036 ENCODE Processing Pipeline d1fb531001e427b471b156cf928c46ae https://www.encodeproject.org/files/ENCFF635SZW/@@download/ENCFF635SZW.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF364FBS bed narrowPeak peaks ENCSR888XZK ChIP-seq EFO:0002067 K562 cell line Homo sapiens TCF7L2-human ENCAB000BED DNA False 2016-07-28 ENCODE 2 ENCFF577FNG, ENCFF600TNR 4356080 ENCODE Processing Pipeline 8a81b1d7b8e2a5f57cbf403bdfb99da4 https://www.encodeproject.org/files/ENCFF364FBS/@@download/ENCFF364FBS.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF567TSK bed narrowPeak peaks ENCSR888XZK ChIP-seq EFO:0002067 K562 cell line Homo sapiens TCF7L2-human ENCAB000BED DNA False 2016-07-28 ENCODE 1, 2 ENCFF156FED, ENCFF425MJK, ENCFF577FNG, ENCFF600TNR 5779468 ENCODE Processing Pipeline 472a63529bff009c252c9bbf582eddff https://www.encodeproject.org/files/ENCFF567TSK/@@download/ENCFF567TSK.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF121UAT bigBed narrowPeak peaks ENCSR888XZK ChIP-seq EFO:0002067 K562 cell line Homo sapiens TCF7L2-human ENCAB000BED DNA False 2016-07-28 ENCODE 1 ENCFF635SZW 10524562 ENCODE Processing Pipeline d7514e4737d7dd06647dd94e67c2d854 https://www.encodeproject.org/files/ENCFF121UAT/@@download/ENCFF121UAT.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF231ZKB bigBed narrowPeak peaks ENCSR888XZK ChIP-seq EFO:0002067 K562 cell line Homo sapiens TCF7L2-human ENCAB000BED DNA False 2016-07-28 ENCODE 1, 2 ENCFF567TSK 11359635 ENCODE Processing Pipeline 4405ef587db4b2a931ce3bdf328673d4 https://www.encodeproject.org/files/ENCFF231ZKB/@@download/ENCFF231ZKB.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF693NZV bigBed narrowPeak peaks ENCSR888XZK ChIP-seq EFO:0002067 K562 cell line Homo sapiens TCF7L2-human ENCAB000BED DNA False 2016-07-28 ENCODE 2 ENCFF364FBS 10610113 ENCODE Processing Pipeline fecd66f6dc0d685587d7c9c30315fb3a https://www.encodeproject.org/files/ENCFF693NZV/@@download/ENCFF693NZV.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF749WKK bed narrowPeak conservative idr thresholded peaks ENCSR888XZK ChIP-seq EFO:0002067 K562 cell line Homo sapiens TCF7L2-human ENCAB000BED DNA False 2016-07-28 ENCODE 1, 2 ENCFF364FBS, ENCFF419RSJ, ENCFF567TSK, ENCFF635SZW 32491 ENCODE Processing Pipeline 375dc0adbb26d52151bd1e9eba3e2061 https://www.encodeproject.org/files/ENCFF749WKK/@@download/ENCFF749WKK.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF955MUG bigBed narrowPeak optimal idr thresholded peaks ENCSR888XZK ChIP-seq EFO:0002067 K562 cell line Homo sapiens TCF7L2-human ENCAB000BED DNA False 2016-07-28 ENCODE 1, 2 ENCFF556FYF 126402 ENCODE Processing Pipeline 85e5c72e69e3ce42faed7c56fc36a437 https://www.encodeproject.org/files/ENCFF955MUG/@@download/ENCFF955MUG.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF481SXQ bigBed narrowPeak conservative idr thresholded peaks ENCSR888XZK ChIP-seq EFO:0002067 K562 cell line Homo sapiens TCF7L2-human ENCAB000BED DNA False 2016-07-28 ENCODE 1, 2 ENCFF749WKK 114837 ENCODE Processing Pipeline 5b89ddfbe03ae6b549435e80fc5c806f https://www.encodeproject.org/files/ENCFF481SXQ/@@download/ENCFF481SXQ.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF556FYF bed narrowPeak optimal idr thresholded peaks ENCSR888XZK ChIP-seq EFO:0002067 K562 cell line Homo sapiens TCF7L2-human ENCAB000BED DNA False 2016-07-28 ENCODE 1, 2 ENCFF364FBS, ENCFF419RSJ, ENCFF567TSK, ENCFF635SZW 39688 ENCODE Processing Pipeline 06fd850832b427a97078af5d005d43e5 https://www.encodeproject.org/files/ENCFF556FYF/@@download/ENCFF556FYF.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF205MMX bed narrowPeak conservative idr thresholded peaks ENCSR888XZK ChIP-seq EFO:0002067 K562 cell line Homo sapiens TCF7L2-human ENCAB000BED DNA False 2016-07-28 ENCODE 1, 2 ENCFF001TDO, ENCFF060XZX, ENCFF274DVQ, ENCFF975NRI 28797 ENCODE Processing Pipeline b4c3930727f5f86632e6ce7ae12c7156 https://www.encodeproject.org/files/ENCFF205MMX/@@download/ENCFF205MMX.bed.gz hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF368WHG bigBed narrowPeak optimal idr thresholded peaks ENCSR888XZK ChIP-seq EFO:0002067 K562 cell line Homo sapiens TCF7L2-human ENCAB000BED DNA False 2016-07-28 ENCODE 1, 2 ENCFF312RFN 97259 ENCODE Processing Pipeline ecdd4f055a207c9c8ff202a8e00b539e https://www.encodeproject.org/files/ENCFF368WHG/@@download/ENCFF368WHG.bigBed hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF394FGG bigBed narrowPeak conservative idr thresholded peaks ENCSR888XZK ChIP-seq EFO:0002067 K562 cell line Homo sapiens TCF7L2-human ENCAB000BED DNA False 2016-07-28 ENCODE 1, 2 ENCFF205MMX 89372 ENCODE Processing Pipeline 17e554c536c3a59ad093d3638fbbe90d https://www.encodeproject.org/files/ENCFF394FGG/@@download/ENCFF394FGG.bigBed hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF312RFN bed narrowPeak optimal idr thresholded peaks ENCSR888XZK ChIP-seq EFO:0002067 K562 cell line Homo sapiens TCF7L2-human ENCAB000BED DNA False 2016-07-28 ENCODE 1, 2 ENCFF001TDO, ENCFF060XZX, ENCFF274DVQ, ENCFF975NRI 34454 ENCODE Processing Pipeline 0d2abc09baae3bbab2319c87770d5ba6 https://www.encodeproject.org/files/ENCFF312RFN/@@download/ENCFF312RFN.bed.gz hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF000YPU fastq reads ENCSR000FAW ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 2 1 34 single-ended 601086765 Sherman Weissman, Yale ec10e7c29f6ee6f6a720e4d9fc133e8a https://www.encodeproject.org/files/ENCFF000YPU/@@download/ENCFF000YPU.fastq.gz Illumina Genome Analyzer /files/ENCFF000YPZ/ released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF000YPW fastq reads ENCSR000FAW ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 1 1 27 single-ended 301432076 Sherman Weissman, Yale 47eeae5414202e45fcdbe89fc599ebe4 https://www.encodeproject.org/files/ENCFF000YPW/@@download/ENCFF000YPW.fastq.gz Illumina Genome Analyzer /files/ENCFF000YPZ/ released mixed read lengths, control low read depth, inconsistent control read length biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF000YWL bam alignments ENCSR000FAW ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 1 ENCFF000YPW 412644743 Sherman Weissman, Yale 26f2537ace952880d08b9bbf6be490d8 https://www.encodeproject.org/files/ENCFF000YWL/@@download/ENCFF000YWL.bam hg19 archived mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF000YWM bigBed narrowPeak peaks ENCSR000FAW ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE ENCFF001VOG 631310 Sherman Weissman, Yale 812f8b3d0196b5683780a513100a72d3 https://www.encodeproject.org/files/ENCFF000YWM/@@download/ENCFF000YWM.bigBed hg19 archived mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF000YWN bigWig signal ENCSR000FAW ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 331946336 Sherman Weissman, Yale 33bdbc45bc5e954f44faefb097f937a5 https://www.encodeproject.org/files/ENCFF000YWN/@@download/ENCFF000YWN.bigWig hg19 archived mixed read lengths, control low read depth biological replicates with identical biosample, missing derived_from insufficient read length, insufficient read depth ENCFF000YWO bam alignments ENCSR000FAW ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 2 ENCFF000YPU 734321227 Sherman Weissman, Yale 2c0c1d70895d5768955a8d3f319c2732 https://www.encodeproject.org/files/ENCFF000YWO/@@download/ENCFF000YWO.bam hg19 archived mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF001VOG bed narrowPeak peaks ENCSR000FAW ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 256161 Sherman Weissman, Yale 8d7e4dc4e4c06518eba48533e260b289 https://www.encodeproject.org/files/ENCFF001VOG/@@download/ENCFF001VOG.bed.gz hg19 archived mixed read lengths, control low read depth biological replicates with identical biosample, missing derived_from insufficient read length, insufficient read depth ENCFF002CXP bed narrowPeak optimal idr thresholded peaks ENCSR000FAW ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 339689 ENCODE Consortium Analysis Working Group 595e0f35033a8d5a007f811923465a60 https://www.encodeproject.org/files/ENCFF002CXP/@@download/ENCFF002CXP.bed.gz hg19 archived mixed read lengths, control low read depth biological replicates with identical biosample, missing derived_from insufficient read length, insufficient read depth ENCFF018SSF bigBed narrowPeak optimal idr thresholded peaks ENCSR000FAW ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE ENCFF002CXP 909622 ENCODE Consortium c2d41ef0de749a0b9b6b6438741a9472 https://www.encodeproject.org/files/ENCFF018SSF/@@download/ENCFF018SSF.bigBed hg19 archived mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF191CWT bam alignments ENCSR000FAW ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 1 27 ENCFF000YPW, ENCFF643CGH 218118299 ENCODE Processing Pipeline 01c112be654a147bc6b9a2cd0d7cdd8d https://www.encodeproject.org/files/ENCFF191CWT/@@download/ENCFF191CWT.bam GRCh38 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF274IWO bam unfiltered alignments ENCSR000FAW ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 1 27 ENCFF000YPW, ENCFF643CGH 413543552 ENCODE Processing Pipeline 1dc92641576fb3481c7ab49586cac45e https://www.encodeproject.org/files/ENCFF274IWO/@@download/ENCFF274IWO.bam GRCh38 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF092XNX bam alignments ENCSR000FAW ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 1 27 ENCFF000YPW, ENCFF807MUK 218390667 ENCODE Processing Pipeline 78eeb392d263d16dfa42b4cdd941559c https://www.encodeproject.org/files/ENCFF092XNX/@@download/ENCFF092XNX.bam hg19 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF919KOW bam unfiltered alignments ENCSR000FAW ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 1 27 ENCFF000YPW, ENCFF807MUK 412988172 ENCODE Processing Pipeline b67cb4d1a679c256633b40c898ad8783 https://www.encodeproject.org/files/ENCFF919KOW/@@download/ENCFF919KOW.bam hg19 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF033BLI bam unfiltered alignments ENCSR000FAW ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 2 27 ENCFF000YPU, ENCFF643CGH 667024960 ENCODE Processing Pipeline 84f1b33f011bac77ce6d4f3a0da7b25e https://www.encodeproject.org/files/ENCFF033BLI/@@download/ENCFF033BLI.bam GRCh38 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF536TPK bam alignments ENCSR000FAW ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 2 27 ENCFF000YPU, ENCFF643CGH 317252591 ENCODE Processing Pipeline 95913fa521630bb9bf961b90c59c69f7 https://www.encodeproject.org/files/ENCFF536TPK/@@download/ENCFF536TPK.bam GRCh38 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF667RDJ bam unfiltered alignments ENCSR000FAW ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 2 27 ENCFF000YPU, ENCFF807MUK 665974435 ENCODE Processing Pipeline f058a839b2501ce355c9aa3be5c27006 https://www.encodeproject.org/files/ENCFF667RDJ/@@download/ENCFF667RDJ.bam hg19 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF204HNK bam alignments ENCSR000FAW ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 2 27 ENCFF000YPU, ENCFF807MUK 317623579 ENCODE Processing Pipeline d2882ea90f1c2722c424e6d0fc8dbc05 https://www.encodeproject.org/files/ENCFF204HNK/@@download/ENCFF204HNK.bam hg19 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF442LDZ bigWig signal p-value ENCSR000FAW ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 1 ENCFF191CWT, ENCFF482LDC 254522153 ENCODE Processing Pipeline d83026f5a8597fc88bf198dad958d724 https://www.encodeproject.org/files/ENCFF442LDZ/@@download/ENCFF442LDZ.bigWig GRCh38 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF053FBY bigWig signal p-value ENCSR000FAW ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 2 ENCFF482LDC, ENCFF536TPK 233467418 ENCODE Processing Pipeline abca3fe5d6ee559febb12cab1b1742ce https://www.encodeproject.org/files/ENCFF053FBY/@@download/ENCFF053FBY.bigWig GRCh38 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF968PKA bigWig signal p-value ENCSR000FAW ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 2 ENCFF204HNK, ENCFF331ARQ 271140333 ENCODE Processing Pipeline 60d12dbf309398263ce3168d16375477 https://www.encodeproject.org/files/ENCFF968PKA/@@download/ENCFF968PKA.bigWig hg19 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF583GHT bigWig signal p-value ENCSR000FAW ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 1 ENCFF092XNX, ENCFF331ARQ 218915393 ENCODE Processing Pipeline d78da9cfd93be09ab5bd12d67c80f025 https://www.encodeproject.org/files/ENCFF583GHT/@@download/ENCFF583GHT.bigWig hg19 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF561WQY bigWig signal p-value ENCSR000FAW ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF092XNX, ENCFF204HNK, ENCFF331ARQ 269146334 ENCODE Processing Pipeline ff24231b23db6d708853c3408068a574 https://www.encodeproject.org/files/ENCFF561WQY/@@download/ENCFF561WQY.bigWig hg19 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF489AQR bigWig signal p-value ENCSR000FAW ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF191CWT, ENCFF482LDC, ENCFF536TPK 271896905 ENCODE Processing Pipeline b4ad0cbc583165b99905bcd18795d3e0 https://www.encodeproject.org/files/ENCFF489AQR/@@download/ENCFF489AQR.bigWig GRCh38 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF127MLV bigWig fold change over control ENCSR000FAW ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 1 ENCFF092XNX, ENCFF331ARQ 92469063 ENCODE Processing Pipeline 5d78070b088a328637ae077b871d517f https://www.encodeproject.org/files/ENCFF127MLV/@@download/ENCFF127MLV.bigWig hg19 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF643UVE bigWig fold change over control ENCSR000FAW ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 1 ENCFF191CWT, ENCFF482LDC 92181237 ENCODE Processing Pipeline d318079ac7a25e6a0fb4659c475dad74 https://www.encodeproject.org/files/ENCFF643UVE/@@download/ENCFF643UVE.bigWig GRCh38 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF316COU bigBed narrowPeak peaks ENCSR000FAW ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 1 ENCFF504GWC 6953101 ENCODE Processing Pipeline 6bc05edd16538b55c40c9bedb45d1c99 https://www.encodeproject.org/files/ENCFF316COU/@@download/ENCFF316COU.bigBed hg19 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF571LAV bigWig fold change over control ENCSR000FAW ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 2 ENCFF204HNK, ENCFF331ARQ 133486304 ENCODE Processing Pipeline 663a5b0bbf2d6e8eb3e594db66c8401d https://www.encodeproject.org/files/ENCFF571LAV/@@download/ENCFF571LAV.bigWig hg19 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF254MXE bigWig fold change over control ENCSR000FAW ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF092XNX, ENCFF204HNK, ENCFF331ARQ 194433179 ENCODE Processing Pipeline b30f8050afbdf4f167ceded6612dc0c2 https://www.encodeproject.org/files/ENCFF254MXE/@@download/ENCFF254MXE.bigWig hg19 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF042IXM bigWig fold change over control ENCSR000FAW ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF191CWT, ENCFF482LDC, ENCFF536TPK 198136226 ENCODE Processing Pipeline bef5609101bf2aeb2ae3f6919bd5c597 https://www.encodeproject.org/files/ENCFF042IXM/@@download/ENCFF042IXM.bigWig GRCh38 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF439GEX bed narrowPeak peaks ENCSR000FAW ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 1 ENCFF191CWT, ENCFF482LDC 2977390 ENCODE Processing Pipeline 097ae558539e388f566666a798bcb40c https://www.encodeproject.org/files/ENCFF439GEX/@@download/ENCFF439GEX.bed.gz GRCh38 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF382GUS bed narrowPeak peaks ENCSR000FAW ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF191CWT, ENCFF482LDC, ENCFF536TPK 5910082 ENCODE Processing Pipeline b3294ec7a0f631d7f3616a5a6e3736fa https://www.encodeproject.org/files/ENCFF382GUS/@@download/ENCFF382GUS.bed.gz GRCh38 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF582LDX bigBed narrowPeak peaks ENCSR000FAW ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 1 ENCFF439GEX 6811075 ENCODE Processing Pipeline aa5fadad6af28ad1ce048b9e199a49be https://www.encodeproject.org/files/ENCFF582LDX/@@download/ENCFF582LDX.bigBed GRCh38 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF747YEV bigWig fold change over control ENCSR000FAW ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 2 ENCFF482LDC, ENCFF536TPK 133408559 ENCODE Processing Pipeline 96b7d3416600c2989b93cfc79ec0c7bc https://www.encodeproject.org/files/ENCFF747YEV/@@download/ENCFF747YEV.bigWig GRCh38 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF960XPL bed narrowPeak peaks ENCSR000FAW ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF092XNX, ENCFF204HNK, ENCFF331ARQ 5909698 ENCODE Processing Pipeline eafe5d6aa8253767b2ff8a43a373dedc https://www.encodeproject.org/files/ENCFF960XPL/@@download/ENCFF960XPL.bed.gz hg19 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF504GWC bed narrowPeak peaks ENCSR000FAW ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 1 ENCFF092XNX, ENCFF331ARQ 3084780 ENCODE Processing Pipeline 579a7e054022988ab00ef76fb44b1f7a https://www.encodeproject.org/files/ENCFF504GWC/@@download/ENCFF504GWC.bed.gz hg19 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF236JJW bed narrowPeak peaks ENCSR000FAW ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 2 ENCFF482LDC, ENCFF536TPK 4826877 ENCODE Processing Pipeline 54e0613317285100475f69a1ef9c4643 https://www.encodeproject.org/files/ENCFF236JJW/@@download/ENCFF236JJW.bed.gz GRCh38 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF794PUU bigBed narrowPeak peaks ENCSR000FAW ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 2 ENCFF070AMD 10648112 ENCODE Processing Pipeline 26306634d7fbcff817ff80dc926a0a0f https://www.encodeproject.org/files/ENCFF794PUU/@@download/ENCFF794PUU.bigBed hg19 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF537BOT bigBed narrowPeak peaks ENCSR000FAW ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF382GUS 12134948 ENCODE Processing Pipeline c29236a74af41dd02f19d493dc6dd928 https://www.encodeproject.org/files/ENCFF537BOT/@@download/ENCFF537BOT.bigBed GRCh38 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF070AMD bed narrowPeak peaks ENCSR000FAW ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 2 ENCFF204HNK, ENCFF331ARQ 4885849 ENCODE Processing Pipeline b60020d752c55ab932b317dfae0c5108 https://www.encodeproject.org/files/ENCFF070AMD/@@download/ENCFF070AMD.bed.gz hg19 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF649PVK bigBed narrowPeak conservative idr thresholded peaks ENCSR000FAW ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF857WHF 778980 ENCODE Processing Pipeline 9a6949ac8d7a7769b3fbc20c1536fdbb https://www.encodeproject.org/files/ENCFF649PVK/@@download/ENCFF649PVK.bigBed GRCh38 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF644EKX bigBed narrowPeak peaks ENCSR000FAW ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 2 ENCFF236JJW 10523804 ENCODE Processing Pipeline 6c91548ebd0d0ccf189c84fdb30baa69 https://www.encodeproject.org/files/ENCFF644EKX/@@download/ENCFF644EKX.bigBed GRCh38 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF632ZWX bigBed narrowPeak peaks ENCSR000FAW ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF960XPL 12139772 ENCODE Processing Pipeline 8fd13a080d376776e68525751c547e9d https://www.encodeproject.org/files/ENCFF632ZWX/@@download/ENCFF632ZWX.bigBed hg19 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF231OJM bed narrowPeak conservative idr thresholded peaks ENCSR000FAW ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF001TDO, ENCFF070AMD, ENCFF504GWC, ENCFF960XPL 368368 ENCODE Processing Pipeline bad16d7b6f9665b5936a9374ea333c51 https://www.encodeproject.org/files/ENCFF231OJM/@@download/ENCFF231OJM.bed.gz hg19 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF496FOS bigBed narrowPeak conservative idr thresholded peaks ENCSR000FAW ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF231OJM 773914 ENCODE Processing Pipeline a55c76d676bf7d4064377418304e078e https://www.encodeproject.org/files/ENCFF496FOS/@@download/ENCFF496FOS.bigBed hg19 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF853ZMA bed narrowPeak optimal idr thresholded peaks ENCSR000FAW ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF001TDO, ENCFF070AMD, ENCFF504GWC, ENCFF960XPL 383287 ENCODE Processing Pipeline 414b0ad344508990af3dd892c5653dd3 https://www.encodeproject.org/files/ENCFF853ZMA/@@download/ENCFF853ZMA.bed.gz hg19 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF857WHF bed narrowPeak conservative idr thresholded peaks ENCSR000FAW ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF236JJW, ENCFF382GUS, ENCFF419RSJ, ENCFF439GEX 371203 ENCODE Processing Pipeline 126e57955e13ccad4e0fba1aabe85dc3 https://www.encodeproject.org/files/ENCFF857WHF/@@download/ENCFF857WHF.bed.gz GRCh38 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF099NYA bed narrowPeak optimal idr thresholded peaks ENCSR000FAW ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF236JJW, ENCFF382GUS, ENCFF419RSJ, ENCFF439GEX 383286 ENCODE Processing Pipeline c596a6ebffcfce8c02e2dedd3db4468e https://www.encodeproject.org/files/ENCFF099NYA/@@download/ENCFF099NYA.bed.gz GRCh38 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF989BFD bigBed narrowPeak optimal idr thresholded peaks ENCSR000FAW ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF099NYA 974628 ENCODE Processing Pipeline 8ea471580bcec54ce2124aa82fe8557d https://www.encodeproject.org/files/ENCFF989BFD/@@download/ENCFF989BFD.bigBed GRCh38 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF596SMQ bigBed narrowPeak optimal idr thresholded peaks ENCSR000FAW ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF853ZMA 973605 ENCODE Processing Pipeline d34d7f9b33bd8d0c088fb0f671aee5fe https://www.encodeproject.org/files/ENCFF596SMQ/@@download/ENCFF596SMQ.bigBed hg19 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF000QCL bam alignments ENCSR000BMW ChIP-seq EFO:0002067 K562 cell line Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1 ENCFF000QCX 1003209775 Richard Myers, HAIB e589e938cdb5e2cd7c3d851583e41d07 https://www.encodeproject.org/files/ENCFF000QCL/@@download/ENCFF000QCL.bam hg19 archived borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, poor library complexity, insufficient read depth, severe bottlenecking ENCFF000QCM bam alignments ENCSR000BMW ChIP-seq EFO:0002067 K562 cell line Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 2 ENCFF000QCW 766714301 Richard Myers, HAIB d76bb63fb3ad2f287f220481e509cf56 https://www.encodeproject.org/files/ENCFF000QCM/@@download/ENCFF000QCM.bam hg19 archived borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, poor library complexity, insufficient read depth, severe bottlenecking ENCFF000QCN bigBed broadPeak peaks ENCSR000BMW ChIP-seq EFO:0002067 K562 cell line Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1 1 ENCFF001UKN 648385 Richard Myers, HAIB 8ee48d4a512a3857fb25e9c0927c8796 https://www.encodeproject.org/files/ENCFF000QCN/@@download/ENCFF000QCN.bigBed hg19 archived borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, poor library complexity, insufficient read depth, severe bottlenecking ENCFF000QCO bigBed broadPeak peaks ENCSR000BMW ChIP-seq EFO:0002067 K562 cell line Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 2 1 ENCFF001UKO 328928 Richard Myers, HAIB 16f652c702c105c75aee212c83f9dc62 https://www.encodeproject.org/files/ENCFF000QCO/@@download/ENCFF000QCO.bigBed hg19 archived borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, poor library complexity, insufficient read depth, severe bottlenecking ENCFF000QCP bigWig raw signal ENCSR000BMW ChIP-seq EFO:0002067 K562 cell line Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1 1 27932557 Richard Myers, HAIB 5f3ee808aa9708ece85f7f0f192e2ee1 https://www.encodeproject.org/files/ENCFF000QCP/@@download/ENCFF000QCP.bigWig hg19 archived borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample, missing derived_from control insufficient read depth, poor library complexity, insufficient read depth, severe bottlenecking ENCFF000QCQ bigWig raw signal ENCSR000BMW ChIP-seq EFO:0002067 K562 cell line Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 2 1 13940871 Richard Myers, HAIB a3534bf0934699b9e8c3215cddf56424 https://www.encodeproject.org/files/ENCFF000QCQ/@@download/ENCFF000QCQ.bigWig hg19 archived borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample, missing derived_from control insufficient read depth, poor library complexity, insufficient read depth, severe bottlenecking ENCFF000QCW fastq reads ENCSR000BMW ChIP-seq EFO:0002067 K562 cell line Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 2 1 36 single-ended 869258416 Richard Myers, HAIB e380bdf76068f311df681e162f4eb5ee https://www.encodeproject.org/files/ENCFF000QCW/@@download/ENCFF000QCW.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000QEX/ released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, poor library complexity, insufficient read depth, severe bottlenecking ENCFF000QCX fastq reads ENCSR000BMW ChIP-seq EFO:0002067 K562 cell line Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1 1 36 single-ended 1033479208 Richard Myers, HAIB 36ba7684f96ef2a6776670b07f8bf8b7 https://www.encodeproject.org/files/ENCFF000QCX/@@download/ENCFF000QCX.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000QEX/ released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, poor library complexity, insufficient read depth, severe bottlenecking ENCFF001UKN bed broadPeak peaks ENCSR000BMW ChIP-seq EFO:0002067 K562 cell line Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1 1 373967 Richard Myers, HAIB 69370eb3b54abca4fb9922bcf9895392 https://www.encodeproject.org/files/ENCFF001UKN/@@download/ENCFF001UKN.bed.gz hg19 archived borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample, missing derived_from control insufficient read depth, poor library complexity, insufficient read depth, severe bottlenecking ENCFF001UKO bed broadPeak peaks ENCSR000BMW ChIP-seq EFO:0002067 K562 cell line Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 2 1 185372 Richard Myers, HAIB d34bfc68a5e6ac6ecb52a876d9d93c74 https://www.encodeproject.org/files/ENCFF001UKO/@@download/ENCFF001UKO.bed.gz hg19 archived borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample, missing derived_from control insufficient read depth, poor library complexity, insufficient read depth, severe bottlenecking ENCFF002CMF bed narrowPeak optimal idr thresholded peaks ENCSR000BMW ChIP-seq EFO:0002067 K562 cell line Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 312017 ENCODE Consortium Analysis Working Group efd79bfac03aaccd0ab8859080c6ee93 https://www.encodeproject.org/files/ENCFF002CMF/@@download/ENCFF002CMF.bed.gz hg19 archived borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample, missing derived_from control insufficient read depth, poor library complexity, insufficient read depth, severe bottlenecking ENCFF230OTB bigBed narrowPeak optimal idr thresholded peaks ENCSR000BMW ChIP-seq EFO:0002067 K562 cell line Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE ENCFF002CMF 642595 ENCODE Consortium 6b67264986b3d3577ebdbd839940060c https://www.encodeproject.org/files/ENCFF230OTB/@@download/ENCFF230OTB.bigBed hg19 archived borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, poor library complexity, insufficient read depth, severe bottlenecking ENCFF665LOG bam unfiltered alignments ENCSR000BMW ChIP-seq EFO:0002067 K562 cell line Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000QCW, ENCFF643CGH 934269192 ENCODE Processing Pipeline fe5ccfb579c4021740b8545bdaad9e8d https://www.encodeproject.org/files/ENCFF665LOG/@@download/ENCFF665LOG.bam GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, poor library complexity, insufficient read depth, severe bottlenecking ENCFF204TUQ bam alignments ENCSR000BMW ChIP-seq EFO:0002067 K562 cell line Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000QCW, ENCFF643CGH 246811240 ENCODE Processing Pipeline 377dca7f1fd60314e38691c3c3b7ae7d https://www.encodeproject.org/files/ENCFF204TUQ/@@download/ENCFF204TUQ.bam GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, poor library complexity, insufficient read depth, severe bottlenecking ENCFF546IMN bam alignments ENCSR000BMW ChIP-seq EFO:0002067 K562 cell line Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000QCX, ENCFF643CGH 586250514 ENCODE Processing Pipeline 2386e332922f0541ce3244b8686354a3 https://www.encodeproject.org/files/ENCFF546IMN/@@download/ENCFF546IMN.bam GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, poor library complexity, insufficient read depth, severe bottlenecking ENCFF905ENZ bam unfiltered alignments ENCSR000BMW ChIP-seq EFO:0002067 K562 cell line Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000QCX, ENCFF643CGH 1211907180 ENCODE Processing Pipeline 045d900ea7a1f2663bff0c5f69682db5 https://www.encodeproject.org/files/ENCFF905ENZ/@@download/ENCFF905ENZ.bam GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, poor library complexity, insufficient read depth, severe bottlenecking ENCFF852HXT bam unfiltered alignments ENCSR000BMW ChIP-seq EFO:0002067 K562 cell line Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000QCW, ENCFF807MUK 932949145 ENCODE Processing Pipeline 7a2bee2fcfeaf162281acf3678d2685b https://www.encodeproject.org/files/ENCFF852HXT/@@download/ENCFF852HXT.bam hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, poor library complexity, insufficient read depth, severe bottlenecking ENCFF520WAB bam alignments ENCSR000BMW ChIP-seq EFO:0002067 K562 cell line Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000QCW, ENCFF807MUK 246971146 ENCODE Processing Pipeline 1e35756296cde948e87bc9b786f83b6f https://www.encodeproject.org/files/ENCFF520WAB/@@download/ENCFF520WAB.bam hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, poor library complexity, insufficient read depth, severe bottlenecking ENCFF262GNW bam unfiltered alignments ENCSR000BMW ChIP-seq EFO:0002067 K562 cell line Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000QCX, ENCFF807MUK 1210166944 ENCODE Processing Pipeline d481d07e22c8bb2469c6a254bf67c4d2 https://www.encodeproject.org/files/ENCFF262GNW/@@download/ENCFF262GNW.bam hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, poor library complexity, insufficient read depth, severe bottlenecking ENCFF294HHJ bam alignments ENCSR000BMW ChIP-seq EFO:0002067 K562 cell line Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000QCX, ENCFF807MUK 586538608 ENCODE Processing Pipeline 9df4f20d23579efe405286e18b24958c https://www.encodeproject.org/files/ENCFF294HHJ/@@download/ENCFF294HHJ.bam hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, poor library complexity, insufficient read depth, severe bottlenecking ENCFF502FFY bigWig signal p-value ENCSR000BMW ChIP-seq EFO:0002067 K562 cell line Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 2 ENCFF204TUQ, ENCFF772PJM 177040418 ENCODE Processing Pipeline 6614ecba426faa9203e7e1a4b597f9d9 https://www.encodeproject.org/files/ENCFF502FFY/@@download/ENCFF502FFY.bigWig GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, poor library complexity, insufficient read depth, severe bottlenecking ENCFF011JMK bigBed narrowPeak peaks ENCSR000BMW ChIP-seq EFO:0002067 K562 cell line Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 2 ENCFF755HSD 5434271 ENCODE Processing Pipeline 0f4a31d6cbdfc8371cd2440b40f87dab https://www.encodeproject.org/files/ENCFF011JMK/@@download/ENCFF011JMK.bigBed GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, poor library complexity, insufficient read depth, severe bottlenecking ENCFF586CEH bigWig signal p-value ENCSR000BMW ChIP-seq EFO:0002067 K562 cell line Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1 ENCFF546IMN, ENCFF772PJM 207818593 ENCODE Processing Pipeline ae310e9c913d9611c156f1f14ca86140 https://www.encodeproject.org/files/ENCFF586CEH/@@download/ENCFF586CEH.bigWig GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, poor library complexity, insufficient read depth, severe bottlenecking ENCFF042IHV bigWig signal p-value ENCSR000BMW ChIP-seq EFO:0002067 K562 cell line Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF204TUQ, ENCFF546IMN, ENCFF772PJM 199303760 ENCODE Processing Pipeline 243c3133647ffc233267dcf74ee43cbb https://www.encodeproject.org/files/ENCFF042IHV/@@download/ENCFF042IHV.bigWig GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, poor library complexity, insufficient read depth, severe bottlenecking ENCFF755HSD bed narrowPeak peaks ENCSR000BMW ChIP-seq EFO:0002067 K562 cell line Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 2 ENCFF204TUQ, ENCFF772PJM 2656759 ENCODE Processing Pipeline 69f832bd3be8be7034aeea121df7e0d2 https://www.encodeproject.org/files/ENCFF755HSD/@@download/ENCFF755HSD.bed.gz GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, poor library complexity, insufficient read depth, severe bottlenecking ENCFF286MTX bed narrowPeak peaks ENCSR000BMW ChIP-seq EFO:0002067 K562 cell line Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF204TUQ, ENCFF546IMN, ENCFF772PJM 1756619 ENCODE Processing Pipeline f72241646af97bb20cbd34b0215fca7a https://www.encodeproject.org/files/ENCFF286MTX/@@download/ENCFF286MTX.bed.gz GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, poor library complexity, insufficient read depth, severe bottlenecking ENCFF402BGN bigWig fold change over control ENCSR000BMW ChIP-seq EFO:0002067 K562 cell line Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1 ENCFF546IMN, ENCFF772PJM 218594017 ENCODE Processing Pipeline 20524aea3ea0bf0a6ea0ef36694b1629 https://www.encodeproject.org/files/ENCFF402BGN/@@download/ENCFF402BGN.bigWig GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, poor library complexity, insufficient read depth, severe bottlenecking ENCFF997BZY bigWig fold change over control ENCSR000BMW ChIP-seq EFO:0002067 K562 cell line Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 2 ENCFF204TUQ, ENCFF772PJM 98642048 ENCODE Processing Pipeline 518a214019e26f1d4770df23c85d769d https://www.encodeproject.org/files/ENCFF997BZY/@@download/ENCFF997BZY.bigWig GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, poor library complexity, insufficient read depth, severe bottlenecking ENCFF384IZU bigWig fold change over control ENCSR000BMW ChIP-seq EFO:0002067 K562 cell line Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF204TUQ, ENCFF546IMN, ENCFF772PJM 291397438 ENCODE Processing Pipeline ddbd4049e6c83a59e058ab95c6cea482 https://www.encodeproject.org/files/ENCFF384IZU/@@download/ENCFF384IZU.bigWig GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, poor library complexity, insufficient read depth, severe bottlenecking ENCFF082DAI bed narrowPeak peaks ENCSR000BMW ChIP-seq EFO:0002067 K562 cell line Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1 ENCFF546IMN, ENCFF772PJM 2474090 ENCODE Processing Pipeline 1217421d297fbc437dca3d0f29a41e06 https://www.encodeproject.org/files/ENCFF082DAI/@@download/ENCFF082DAI.bed.gz GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, poor library complexity, insufficient read depth, severe bottlenecking ENCFF102SLH bigBed narrowPeak peaks ENCSR000BMW ChIP-seq EFO:0002067 K562 cell line Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF286MTX 3436197 ENCODE Processing Pipeline 10da411ea83b797bd5e4f3dc05e63fa3 https://www.encodeproject.org/files/ENCFF102SLH/@@download/ENCFF102SLH.bigBed GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, poor library complexity, insufficient read depth, severe bottlenecking ENCFF975FXR bigBed narrowPeak peaks ENCSR000BMW ChIP-seq EFO:0002067 K562 cell line Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1 ENCFF082DAI 5349108 ENCODE Processing Pipeline 0b2e2472cffa0f810867935a8391c739 https://www.encodeproject.org/files/ENCFF975FXR/@@download/ENCFF975FXR.bigBed GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, poor library complexity, insufficient read depth, severe bottlenecking ENCFF336QGQ bigBed narrowPeak conservative idr thresholded peaks ENCSR000BMW ChIP-seq EFO:0002067 K562 cell line Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF809CZV 320152 ENCODE Processing Pipeline 757c03f350e8a6367b34e6eef30d7a50 https://www.encodeproject.org/files/ENCFF336QGQ/@@download/ENCFF336QGQ.bigBed GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, poor library complexity, insufficient read depth, severe bottlenecking ENCFF427YTW bigBed narrowPeak optimal idr thresholded peaks ENCSR000BMW ChIP-seq EFO:0002067 K562 cell line Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF023ZUW 413060 ENCODE Processing Pipeline 647f6aae3b44674acc3ccc708b5c11c7 https://www.encodeproject.org/files/ENCFF427YTW/@@download/ENCFF427YTW.bigBed GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, poor library complexity, insufficient read depth, severe bottlenecking ENCFF809CZV bed narrowPeak conservative idr thresholded peaks ENCSR000BMW ChIP-seq EFO:0002067 K562 cell line Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF082DAI, ENCFF286MTX, ENCFF419RSJ, ENCFF755HSD 162696 ENCODE Processing Pipeline 1be4893c8ac580d221c18ca8fba2d66c https://www.encodeproject.org/files/ENCFF809CZV/@@download/ENCFF809CZV.bed.gz GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, poor library complexity, insufficient read depth, severe bottlenecking ENCFF023ZUW bed narrowPeak optimal idr thresholded peaks ENCSR000BMW ChIP-seq EFO:0002067 K562 cell line Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF082DAI, ENCFF286MTX, ENCFF419RSJ, ENCFF755HSD 236250 ENCODE Processing Pipeline 32adbc5e9e50c18860ffbb3c15be97b6 https://www.encodeproject.org/files/ENCFF023ZUW/@@download/ENCFF023ZUW.bed.gz GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, poor library complexity, insufficient read depth, severe bottlenecking ENCFF317QZA bigWig signal p-value ENCSR000BMW ChIP-seq EFO:0002067 K562 cell line Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1 ENCFF294HHJ, ENCFF750MIM 207875529 ENCODE Processing Pipeline 68d857a49604a1084b28c05383d511e3 https://www.encodeproject.org/files/ENCFF317QZA/@@download/ENCFF317QZA.bigWig hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, poor library complexity, insufficient read depth, severe bottlenecking ENCFF833IGQ bigWig fold change over control ENCSR000BMW ChIP-seq EFO:0002067 K562 cell line Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1 ENCFF294HHJ, ENCFF750MIM 215438769 ENCODE Processing Pipeline 4d803385fb55f003c0b1ac4771c53f9a https://www.encodeproject.org/files/ENCFF833IGQ/@@download/ENCFF833IGQ.bigWig hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, poor library complexity, insufficient read depth, severe bottlenecking ENCFF886WIO bigWig signal p-value ENCSR000BMW ChIP-seq EFO:0002067 K562 cell line Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 2 ENCFF520WAB, ENCFF750MIM 178178422 ENCODE Processing Pipeline 7a80753acb89b7fea9327312eba9f0c0 https://www.encodeproject.org/files/ENCFF886WIO/@@download/ENCFF886WIO.bigWig hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, poor library complexity, insufficient read depth, severe bottlenecking ENCFF621KLV bed narrowPeak peaks ENCSR000BMW ChIP-seq EFO:0002067 K562 cell line Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1 ENCFF294HHJ, ENCFF750MIM 2505082 ENCODE Processing Pipeline ed746289c113d26f59115ce9fd2bf3fc https://www.encodeproject.org/files/ENCFF621KLV/@@download/ENCFF621KLV.bed.gz hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, poor library complexity, insufficient read depth, severe bottlenecking ENCFF764CZH bed narrowPeak peaks ENCSR000BMW ChIP-seq EFO:0002067 K562 cell line Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 2 ENCFF520WAB, ENCFF750MIM 2665976 ENCODE Processing Pipeline 5abea8924974ef06db7224d4c8df8842 https://www.encodeproject.org/files/ENCFF764CZH/@@download/ENCFF764CZH.bed.gz hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, poor library complexity, insufficient read depth, severe bottlenecking ENCFF837RQB bigWig signal p-value ENCSR000BMW ChIP-seq EFO:0002067 K562 cell line Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF294HHJ, ENCFF520WAB, ENCFF750MIM 199522420 ENCODE Processing Pipeline 7fb36a594e5942c1cf860ef38e27e52c https://www.encodeproject.org/files/ENCFF837RQB/@@download/ENCFF837RQB.bigWig hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, poor library complexity, insufficient read depth, severe bottlenecking ENCFF051ITR bed narrowPeak peaks ENCSR000BMW ChIP-seq EFO:0002067 K562 cell line Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF294HHJ, ENCFF520WAB, ENCFF750MIM 1780886 ENCODE Processing Pipeline 63f8f76fae5914f5db88ef58fa1c7e9c https://www.encodeproject.org/files/ENCFF051ITR/@@download/ENCFF051ITR.bed.gz hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, poor library complexity, insufficient read depth, severe bottlenecking ENCFF518QUW bigWig fold change over control ENCSR000BMW ChIP-seq EFO:0002067 K562 cell line Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF294HHJ, ENCFF520WAB, ENCFF750MIM 291083130 ENCODE Processing Pipeline 62fc792c325b76af51c5e680fe94b40c https://www.encodeproject.org/files/ENCFF518QUW/@@download/ENCFF518QUW.bigWig hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, poor library complexity, insufficient read depth, severe bottlenecking ENCFF325PRT bigWig fold change over control ENCSR000BMW ChIP-seq EFO:0002067 K562 cell line Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 2 ENCFF520WAB, ENCFF750MIM 97817171 ENCODE Processing Pipeline 63e9edaff1a6719a0c86a4b9cc92c098 https://www.encodeproject.org/files/ENCFF325PRT/@@download/ENCFF325PRT.bigWig hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, poor library complexity, insufficient read depth, severe bottlenecking ENCFF538NQS bigBed narrowPeak peaks ENCSR000BMW ChIP-seq EFO:0002067 K562 cell line Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 2 ENCFF764CZH 5445655 ENCODE Processing Pipeline 4f4fb75346c592dc0232dcf38611ca9f https://www.encodeproject.org/files/ENCFF538NQS/@@download/ENCFF538NQS.bigBed hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, poor library complexity, insufficient read depth, severe bottlenecking ENCFF684NTJ bigBed narrowPeak peaks ENCSR000BMW ChIP-seq EFO:0002067 K562 cell line Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1 ENCFF621KLV 5389584 ENCODE Processing Pipeline 2408203e9e2a8457a7d692ceef97fbc3 https://www.encodeproject.org/files/ENCFF684NTJ/@@download/ENCFF684NTJ.bigBed hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, poor library complexity, insufficient read depth, severe bottlenecking ENCFF150ZBF bigBed narrowPeak peaks ENCSR000BMW ChIP-seq EFO:0002067 K562 cell line Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF051ITR 4067206 ENCODE Processing Pipeline b4a8c851003358caa735aeb21068593e https://www.encodeproject.org/files/ENCFF150ZBF/@@download/ENCFF150ZBF.bigBed hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, poor library complexity, insufficient read depth, severe bottlenecking ENCFF558VPP bed narrowPeak optimal idr thresholded peaks ENCSR000BMW ChIP-seq EFO:0002067 K562 cell line Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF001TDO, ENCFF051ITR, ENCFF621KLV, ENCFF764CZH 239761 ENCODE Processing Pipeline 810c09de8b3c3fe318e8643e8c5b7e2a https://www.encodeproject.org/files/ENCFF558VPP/@@download/ENCFF558VPP.bed.gz hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, poor library complexity, insufficient read depth, severe bottlenecking ENCFF603SNP bed narrowPeak conservative idr thresholded peaks ENCSR000BMW ChIP-seq EFO:0002067 K562 cell line Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF001TDO, ENCFF051ITR, ENCFF621KLV, ENCFF764CZH 165286 ENCODE Processing Pipeline 382b28627eeb29f28305c62a58c130af https://www.encodeproject.org/files/ENCFF603SNP/@@download/ENCFF603SNP.bed.gz hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, poor library complexity, insufficient read depth, severe bottlenecking ENCFF390TWG bigBed narrowPeak optimal idr thresholded peaks ENCSR000BMW ChIP-seq EFO:0002067 K562 cell line Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF558VPP 515510 ENCODE Processing Pipeline 1a8874754c8dd5b769ea3120857e47a2 https://www.encodeproject.org/files/ENCFF390TWG/@@download/ENCFF390TWG.bigBed hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, poor library complexity, insufficient read depth, severe bottlenecking ENCFF007JTI bigBed narrowPeak conservative idr thresholded peaks ENCSR000BMW ChIP-seq EFO:0002067 K562 cell line Homo sapiens REST-human ENCAB000AJK DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF603SNP 323810 ENCODE Processing Pipeline da52d32d047df2e2ac9cad7f3d077ae2 https://www.encodeproject.org/files/ENCFF007JTI/@@download/ENCFF007JTI.bigBed hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, poor library complexity, insufficient read depth, severe bottlenecking ENCFF124AQZ fastq reads ENCSR594SMP ChIP-seq EFO:0002067 K562 cell line Homo sapiens PHF20-human ENCAB791UJZ DNA False 2018-01-26 ENCODE 1 1 100 paired-ended 2 ENCFF841SWR 2861039083 Michael Snyder, Stanford 420a1d983d6882370579b6cbab0e261c https://www.encodeproject.org/files/ENCFF124AQZ/@@download/ENCFF124AQZ.fastq.gz Illumina HiSeq 2000 /files/ENCFF368UOC/ released experiment not submitted to GEO partially characterized antibody ENCFF841SWR fastq reads ENCSR594SMP ChIP-seq EFO:0002067 K562 cell line Homo sapiens PHF20-human ENCAB791UJZ DNA False 2018-01-26 ENCODE 1 1 100 paired-ended 1 ENCFF124AQZ 2827169854 Michael Snyder, Stanford 71ecb0b19b8c75f41e17230ffe754f8a https://www.encodeproject.org/files/ENCFF841SWR/@@download/ENCFF841SWR.fastq.gz Illumina HiSeq 2000 /files/ENCFF410PHD/ released experiment not submitted to GEO partially characterized antibody ENCFF413ICF fastq reads ENCSR594SMP ChIP-seq EFO:0002067 K562 cell line Homo sapiens PHF20-human ENCAB791UJZ DNA False 2018-01-26 ENCODE 2 1 100 paired-ended 1 ENCFF744BML 2702508314 Michael Snyder, Stanford 467187483c0b750915d70f146de00c14 https://www.encodeproject.org/files/ENCFF413ICF/@@download/ENCFF413ICF.fastq.gz Illumina HiSeq 2000 /files/ENCFF240DTE/ released experiment not submitted to GEO partially characterized antibody ENCFF744BML fastq reads ENCSR594SMP ChIP-seq EFO:0002067 K562 cell line Homo sapiens PHF20-human ENCAB791UJZ DNA False 2018-01-26 ENCODE 2 1 100 paired-ended 2 ENCFF413ICF 2737742272 Michael Snyder, Stanford 58bd4c89c403a4f5b468c873819429e2 https://www.encodeproject.org/files/ENCFF744BML/@@download/ENCFF744BML.fastq.gz Illumina HiSeq 2000 /files/ENCFF608MDV/ released experiment not submitted to GEO partially characterized antibody ENCFF100HCY bam unfiltered alignments ENCSR594SMP ChIP-seq EFO:0002067 K562 cell line Homo sapiens PHF20-human ENCAB791UJZ DNA False 2018-01-26 ENCODE 2 100 ENCFF413ICF, ENCFF744BML, ENCFF807MUK 5842781094 ENCODE Processing Pipeline 0f86189e58e02f2bca60f8bb78fc872f https://www.encodeproject.org/files/ENCFF100HCY/@@download/ENCFF100HCY.bam hg19 released experiment not submitted to GEO partially characterized antibody ENCFF861VRE bam unfiltered alignments ENCSR594SMP ChIP-seq EFO:0002067 K562 cell line Homo sapiens PHF20-human ENCAB791UJZ DNA False 2018-01-26 ENCODE 1 100 ENCFF124AQZ, ENCFF643CGH, ENCFF841SWR 6134536427 ENCODE Processing Pipeline 2a81910b16aaca5373d0362531ae4256 https://www.encodeproject.org/files/ENCFF861VRE/@@download/ENCFF861VRE.bam GRCh38 released experiment not submitted to GEO partially characterized antibody ENCFF409AIZ bam unfiltered alignments ENCSR594SMP ChIP-seq EFO:0002067 K562 cell line Homo sapiens PHF20-human ENCAB791UJZ DNA False 2018-01-26 ENCODE 2 100 ENCFF413ICF, ENCFF643CGH, ENCFF744BML 5843548939 ENCODE Processing Pipeline 5ff5a37091ea72b17e5c9b5768a8c2a8 https://www.encodeproject.org/files/ENCFF409AIZ/@@download/ENCFF409AIZ.bam GRCh38 released experiment not submitted to GEO partially characterized antibody ENCFF295UBW bam unfiltered alignments ENCSR594SMP ChIP-seq EFO:0002067 K562 cell line Homo sapiens PHF20-human ENCAB791UJZ DNA False 2018-01-26 ENCODE 1 100 ENCFF124AQZ, ENCFF807MUK, ENCFF841SWR 6132496034 ENCODE Processing Pipeline 266bb6590c7b7608518f63367446af2a https://www.encodeproject.org/files/ENCFF295UBW/@@download/ENCFF295UBW.bam hg19 released experiment not submitted to GEO partially characterized antibody ENCFF112ARH bam alignments ENCSR594SMP ChIP-seq EFO:0002067 K562 cell line Homo sapiens PHF20-human ENCAB791UJZ DNA False 2018-01-26 ENCODE 2 100 ENCFF413ICF, ENCFF744BML, ENCFF807MUK 4663355962 ENCODE Processing Pipeline bb66dd728b1da0f0518fdd662a5f7742 https://www.encodeproject.org/files/ENCFF112ARH/@@download/ENCFF112ARH.bam hg19 released experiment not submitted to GEO partially characterized antibody ENCFF517SOJ bam alignments ENCSR594SMP ChIP-seq EFO:0002067 K562 cell line Homo sapiens PHF20-human ENCAB791UJZ DNA False 2018-01-26 ENCODE 1 100 ENCFF124AQZ, ENCFF807MUK, ENCFF841SWR 4925213448 ENCODE Processing Pipeline 5c5844941dc157da7b85127c9839ea4c https://www.encodeproject.org/files/ENCFF517SOJ/@@download/ENCFF517SOJ.bam hg19 released experiment not submitted to GEO partially characterized antibody ENCFF090FVY bam alignments ENCSR594SMP ChIP-seq EFO:0002067 K562 cell line Homo sapiens PHF20-human ENCAB791UJZ DNA False 2018-01-26 ENCODE 1 100 ENCFF124AQZ, ENCFF643CGH, ENCFF841SWR 4925741703 ENCODE Processing Pipeline 3a284af5f269481ad252e4f4f69667b8 https://www.encodeproject.org/files/ENCFF090FVY/@@download/ENCFF090FVY.bam GRCh38 released experiment not submitted to GEO partially characterized antibody ENCFF287IHQ bam alignments ENCSR594SMP ChIP-seq EFO:0002067 K562 cell line Homo sapiens PHF20-human ENCAB791UJZ DNA False 2018-01-26 ENCODE 2 100 ENCFF413ICF, ENCFF643CGH, ENCFF744BML 4663184474 ENCODE Processing Pipeline 9672737a0367355d9c8b9bbf470c12e5 https://www.encodeproject.org/files/ENCFF287IHQ/@@download/ENCFF287IHQ.bam GRCh38 released experiment not submitted to GEO partially characterized antibody ENCFF685ZNO bigWig fold change over control ENCSR594SMP ChIP-seq EFO:0002067 K562 cell line Homo sapiens PHF20-human ENCAB791UJZ DNA False 2018-01-26 ENCODE 1 ENCFF262CJE, ENCFF506DFV, ENCFF517SOJ 1419270602 ENCODE Processing Pipeline c639bbd5b297f631febfd5c473590f6f https://www.encodeproject.org/files/ENCFF685ZNO/@@download/ENCFF685ZNO.bigWig hg19 released experiment not submitted to GEO partially characterized antibody ENCFF036IFC bigWig signal p-value ENCSR594SMP ChIP-seq EFO:0002067 K562 cell line Homo sapiens PHF20-human ENCAB791UJZ DNA False 2018-01-26 ENCODE 1, 2 ENCFF112ARH, ENCFF262CJE, ENCFF506DFV, ENCFF517SOJ 1915325964 ENCODE Processing Pipeline 1d40ff61b0b95d7bc728f20031bb817e https://www.encodeproject.org/files/ENCFF036IFC/@@download/ENCFF036IFC.bigWig hg19 released experiment not submitted to GEO partially characterized antibody ENCFF085VSD bigWig signal p-value ENCSR594SMP ChIP-seq EFO:0002067 K562 cell line Homo sapiens PHF20-human ENCAB791UJZ DNA False 2018-01-26 ENCODE 1 ENCFF262CJE, ENCFF506DFV, ENCFF517SOJ 1313263699 ENCODE Processing Pipeline 4865051d531c2f6c2143a59802c6d79d https://www.encodeproject.org/files/ENCFF085VSD/@@download/ENCFF085VSD.bigWig hg19 released experiment not submitted to GEO partially characterized antibody ENCFF923CXM bigBed narrowPeak peaks ENCSR594SMP ChIP-seq EFO:0002067 K562 cell line Homo sapiens PHF20-human ENCAB791UJZ DNA False 2018-01-26 ENCODE 1 ENCFF306BVA 11295009 ENCODE Processing Pipeline a0aa8a88b511b03afd8883b2894093fd https://www.encodeproject.org/files/ENCFF923CXM/@@download/ENCFF923CXM.bigBed hg19 released experiment not submitted to GEO partially characterized antibody ENCFF128DRH bed narrowPeak conservative idr thresholded peaks ENCSR594SMP ChIP-seq EFO:0002067 K562 cell line Homo sapiens PHF20-human ENCAB791UJZ DNA False 2018-01-26 ENCODE 1, 2 ENCFF001TDO, ENCFF088HLB, ENCFF306BVA, ENCFF449TFM 240896 ENCODE Processing Pipeline 0ac32b9b5101149da7cc226f465ab4c0 https://www.encodeproject.org/files/ENCFF128DRH/@@download/ENCFF128DRH.bed.gz hg19 released experiment not submitted to GEO partially characterized antibody ENCFF890YOP bigWig signal p-value ENCSR594SMP ChIP-seq EFO:0002067 K562 cell line Homo sapiens PHF20-human ENCAB791UJZ DNA False 2018-01-26 ENCODE 2 ENCFF112ARH, ENCFF262CJE, ENCFF506DFV 1183045344 ENCODE Processing Pipeline 8387de8f407fd7d74762cca65605e922 https://www.encodeproject.org/files/ENCFF890YOP/@@download/ENCFF890YOP.bigWig hg19 released experiment not submitted to GEO partially characterized antibody ENCFF905ZIF bigWig fold change over control ENCSR594SMP ChIP-seq EFO:0002067 K562 cell line Homo sapiens PHF20-human ENCAB791UJZ DNA False 2018-01-26 ENCODE 1, 2 ENCFF112ARH, ENCFF262CJE, ENCFF506DFV, ENCFF517SOJ 1948498826 ENCODE Processing Pipeline bba2363c8343667f0021deb3472432bb https://www.encodeproject.org/files/ENCFF905ZIF/@@download/ENCFF905ZIF.bigWig hg19 released experiment not submitted to GEO partially characterized antibody ENCFF088HLB bed narrowPeak peaks ENCSR594SMP ChIP-seq EFO:0002067 K562 cell line Homo sapiens PHF20-human ENCAB791UJZ DNA False 2018-01-26 ENCODE 1, 2 ENCFF112ARH, ENCFF262CJE, ENCFF506DFV, ENCFF517SOJ 7228456 ENCODE Processing Pipeline c979bcc5b80b613d1f06c8a5b530f1fc https://www.encodeproject.org/files/ENCFF088HLB/@@download/ENCFF088HLB.bed.gz hg19 released experiment not submitted to GEO partially characterized antibody ENCFF672GNT bigBed narrowPeak peaks ENCSR594SMP ChIP-seq EFO:0002067 K562 cell line Homo sapiens PHF20-human ENCAB791UJZ DNA False 2018-01-26 ENCODE 2 ENCFF449TFM 13337793 ENCODE Processing Pipeline 6ada7b7e378917da7ef3b003c13c719c https://www.encodeproject.org/files/ENCFF672GNT/@@download/ENCFF672GNT.bigBed hg19 released experiment not submitted to GEO partially characterized antibody ENCFF378QZP bigBed narrowPeak optimal idr thresholded peaks ENCSR594SMP ChIP-seq EFO:0002067 K562 cell line Homo sapiens PHF20-human ENCAB791UJZ DNA False 2018-01-26 ENCODE 1, 2 ENCFF948YVM 641525 ENCODE Processing Pipeline 4be7d864d18e9bd2848726a945efd9d8 https://www.encodeproject.org/files/ENCFF378QZP/@@download/ENCFF378QZP.bigBed hg19 released experiment not submitted to GEO partially characterized antibody ENCFF306BVA bed narrowPeak peaks ENCSR594SMP ChIP-seq EFO:0002067 K562 cell line Homo sapiens PHF20-human ENCAB791UJZ DNA False 2018-01-26 ENCODE 1 ENCFF262CJE, ENCFF506DFV, ENCFF517SOJ 6500985 ENCODE Processing Pipeline bd57724400e546636bf4a80368f9bf47 https://www.encodeproject.org/files/ENCFF306BVA/@@download/ENCFF306BVA.bed.gz hg19 released experiment not submitted to GEO partially characterized antibody ENCFF147VCF bigBed narrowPeak peaks ENCSR594SMP ChIP-seq EFO:0002067 K562 cell line Homo sapiens PHF20-human ENCAB791UJZ DNA False 2018-01-26 ENCODE 1, 2 ENCFF088HLB 13256662 ENCODE Processing Pipeline feedc41a7fff746734f53d1a929097d3 https://www.encodeproject.org/files/ENCFF147VCF/@@download/ENCFF147VCF.bigBed hg19 released experiment not submitted to GEO partially characterized antibody ENCFF647BCR bigWig fold change over control ENCSR594SMP ChIP-seq EFO:0002067 K562 cell line Homo sapiens PHF20-human ENCAB791UJZ DNA False 2018-01-26 ENCODE 2 ENCFF112ARH, ENCFF262CJE, ENCFF506DFV 1382527532 ENCODE Processing Pipeline a9d4acc3c91cd36c45e3528bab221706 https://www.encodeproject.org/files/ENCFF647BCR/@@download/ENCFF647BCR.bigWig hg19 released experiment not submitted to GEO partially characterized antibody ENCFF449TFM bed narrowPeak peaks ENCSR594SMP ChIP-seq EFO:0002067 K562 cell line Homo sapiens PHF20-human ENCAB791UJZ DNA False 2018-01-26 ENCODE 2 ENCFF112ARH, ENCFF262CJE, ENCFF506DFV 6864443 ENCODE Processing Pipeline 2e9eed6ee7a02a14ffa6427b2765eabf https://www.encodeproject.org/files/ENCFF449TFM/@@download/ENCFF449TFM.bed.gz hg19 released experiment not submitted to GEO partially characterized antibody ENCFF455LRK bigBed narrowPeak conservative idr thresholded peaks ENCSR594SMP ChIP-seq EFO:0002067 K562 cell line Homo sapiens PHF20-human ENCAB791UJZ DNA False 2018-01-26 ENCODE 1, 2 ENCFF128DRH 558366 ENCODE Processing Pipeline 839241fa4e25e2b864ac688009ce6f8f https://www.encodeproject.org/files/ENCFF455LRK/@@download/ENCFF455LRK.bigBed hg19 released experiment not submitted to GEO partially characterized antibody ENCFF948YVM bed narrowPeak optimal idr thresholded peaks ENCSR594SMP ChIP-seq EFO:0002067 K562 cell line Homo sapiens PHF20-human ENCAB791UJZ DNA False 2018-01-26 ENCODE 1, 2 ENCFF001TDO, ENCFF088HLB, ENCFF306BVA, ENCFF449TFM 290718 ENCODE Processing Pipeline 71944dd6288fae450b528c9a98c7ed04 https://www.encodeproject.org/files/ENCFF948YVM/@@download/ENCFF948YVM.bed.gz hg19 released experiment not submitted to GEO partially characterized antibody ENCFF510JJB bigBed narrowPeak peaks ENCSR594SMP ChIP-seq EFO:0002067 K562 cell line Homo sapiens PHF20-human ENCAB791UJZ DNA False 2018-01-26 ENCODE 1, 2 ENCFF213DBR 13279940 ENCODE Processing Pipeline 7561bc1b1b16e3e26f212e332b0ac559 https://www.encodeproject.org/files/ENCFF510JJB/@@download/ENCFF510JJB.bigBed GRCh38 released experiment not submitted to GEO partially characterized antibody ENCFF518UFI bigWig signal p-value ENCSR594SMP ChIP-seq EFO:0002067 K562 cell line Homo sapiens PHF20-human ENCAB791UJZ DNA False 2018-01-26 ENCODE 2 ENCFF287IHQ, ENCFF720AUK, ENCFF796JTX 1462212799 ENCODE Processing Pipeline 18b8dc5eef955afee585f18cd2056189 https://www.encodeproject.org/files/ENCFF518UFI/@@download/ENCFF518UFI.bigWig GRCh38 released experiment not submitted to GEO partially characterized antibody ENCFF805WYE bigBed narrowPeak peaks ENCSR594SMP ChIP-seq EFO:0002067 K562 cell line Homo sapiens PHF20-human ENCAB791UJZ DNA False 2018-01-26 ENCODE 1 ENCFF866ZDE 11318330 ENCODE Processing Pipeline 28203fea066203ad30b3e91465d85918 https://www.encodeproject.org/files/ENCFF805WYE/@@download/ENCFF805WYE.bigBed GRCh38 released experiment not submitted to GEO partially characterized antibody ENCFF825CTO bigWig signal p-value ENCSR594SMP ChIP-seq EFO:0002067 K562 cell line Homo sapiens PHF20-human ENCAB791UJZ DNA False 2018-01-26 ENCODE 1 ENCFF090FVY, ENCFF720AUK, ENCFF796JTX 1440351957 ENCODE Processing Pipeline 5bf1d53ff02111682920aec559f5bb3e https://www.encodeproject.org/files/ENCFF825CTO/@@download/ENCFF825CTO.bigWig GRCh38 released experiment not submitted to GEO partially characterized antibody ENCFF559ABR bigWig signal p-value ENCSR594SMP ChIP-seq EFO:0002067 K562 cell line Homo sapiens PHF20-human ENCAB791UJZ DNA False 2018-01-26 ENCODE 1, 2 ENCFF090FVY, ENCFF287IHQ, ENCFF720AUK, ENCFF796JTX 1926520013 ENCODE Processing Pipeline ed79b5e8c06a32d701957dcbb2b1b85b https://www.encodeproject.org/files/ENCFF559ABR/@@download/ENCFF559ABR.bigWig GRCh38 released experiment not submitted to GEO partially characterized antibody ENCFF690HFK bed narrowPeak peaks ENCSR594SMP ChIP-seq EFO:0002067 K562 cell line Homo sapiens PHF20-human ENCAB791UJZ DNA False 2018-01-26 ENCODE 2 ENCFF287IHQ, ENCFF720AUK, ENCFF796JTX 6868189 ENCODE Processing Pipeline 670bd59f14412f70fed6f29e35537963 https://www.encodeproject.org/files/ENCFF690HFK/@@download/ENCFF690HFK.bed.gz GRCh38 released experiment not submitted to GEO partially characterized antibody ENCFF206OOF bigBed narrowPeak peaks ENCSR594SMP ChIP-seq EFO:0002067 K562 cell line Homo sapiens PHF20-human ENCAB791UJZ DNA False 2018-01-26 ENCODE 2 ENCFF690HFK 13359512 ENCODE Processing Pipeline d534f42d3dd2d5955ee18b3a7d50aadd https://www.encodeproject.org/files/ENCFF206OOF/@@download/ENCFF206OOF.bigBed GRCh38 released experiment not submitted to GEO partially characterized antibody ENCFF230SJN bigWig fold change over control ENCSR594SMP ChIP-seq EFO:0002067 K562 cell line Homo sapiens PHF20-human ENCAB791UJZ DNA False 2018-01-26 ENCODE 1 ENCFF090FVY, ENCFF720AUK, ENCFF796JTX 1398542371 ENCODE Processing Pipeline b1518ec061ae6e539320de0789f7b9fe https://www.encodeproject.org/files/ENCFF230SJN/@@download/ENCFF230SJN.bigWig GRCh38 released experiment not submitted to GEO partially characterized antibody ENCFF086UGB bigWig fold change over control ENCSR594SMP ChIP-seq EFO:0002067 K562 cell line Homo sapiens PHF20-human ENCAB791UJZ DNA False 2018-01-26 ENCODE 2 ENCFF287IHQ, ENCFF720AUK, ENCFF796JTX 1375378225 ENCODE Processing Pipeline 70f7824df189de93c2644d3dc7c6866e https://www.encodeproject.org/files/ENCFF086UGB/@@download/ENCFF086UGB.bigWig GRCh38 released experiment not submitted to GEO partially characterized antibody ENCFF283FON bigWig fold change over control ENCSR594SMP ChIP-seq EFO:0002067 K562 cell line Homo sapiens PHF20-human ENCAB791UJZ DNA False 2018-01-26 ENCODE 1, 2 ENCFF090FVY, ENCFF287IHQ, ENCFF720AUK, ENCFF796JTX 1960635494 ENCODE Processing Pipeline 385291fdc0279a913b80ecb9ff683d86 https://www.encodeproject.org/files/ENCFF283FON/@@download/ENCFF283FON.bigWig GRCh38 released experiment not submitted to GEO partially characterized antibody ENCFF762GKR bed narrowPeak conservative idr thresholded peaks ENCSR594SMP ChIP-seq EFO:0002067 K562 cell line Homo sapiens PHF20-human ENCAB791UJZ DNA False 2018-01-26 ENCODE 1, 2 ENCFF213DBR, ENCFF419RSJ, ENCFF690HFK, ENCFF866ZDE 244040 ENCODE Processing Pipeline c65abb0473329d9843bbd2ef36f2efd4 https://www.encodeproject.org/files/ENCFF762GKR/@@download/ENCFF762GKR.bed.gz GRCh38 released experiment not submitted to GEO partially characterized antibody ENCFF866ZDE bed narrowPeak peaks ENCSR594SMP ChIP-seq EFO:0002067 K562 cell line Homo sapiens PHF20-human ENCAB791UJZ DNA False 2018-01-26 ENCODE 1 ENCFF090FVY, ENCFF720AUK, ENCFF796JTX 6508836 ENCODE Processing Pipeline 3e80602e1657a07541079417179beff0 https://www.encodeproject.org/files/ENCFF866ZDE/@@download/ENCFF866ZDE.bed.gz GRCh38 released experiment not submitted to GEO partially characterized antibody ENCFF213DBR bed narrowPeak peaks ENCSR594SMP ChIP-seq EFO:0002067 K562 cell line Homo sapiens PHF20-human ENCAB791UJZ DNA False 2018-01-26 ENCODE 1, 2 ENCFF090FVY, ENCFF287IHQ, ENCFF720AUK, ENCFF796JTX 7238538 ENCODE Processing Pipeline 27aa0611abf717d1e58313eb5a6768dc https://www.encodeproject.org/files/ENCFF213DBR/@@download/ENCFF213DBR.bed.gz GRCh38 released experiment not submitted to GEO partially characterized antibody ENCFF259HUS bed narrowPeak optimal idr thresholded peaks ENCSR594SMP ChIP-seq EFO:0002067 K562 cell line Homo sapiens PHF20-human ENCAB791UJZ DNA False 2018-01-26 ENCODE 1, 2 ENCFF213DBR, ENCFF419RSJ, ENCFF690HFK, ENCFF866ZDE 292869 ENCODE Processing Pipeline 0d27fb83c8e396f6d6f8a91fe5110ed1 https://www.encodeproject.org/files/ENCFF259HUS/@@download/ENCFF259HUS.bed.gz GRCh38 released experiment not submitted to GEO partially characterized antibody ENCFF421QRG bigBed narrowPeak conservative idr thresholded peaks ENCSR594SMP ChIP-seq EFO:0002067 K562 cell line Homo sapiens PHF20-human ENCAB791UJZ DNA False 2018-01-26 ENCODE 1, 2 ENCFF762GKR 566642 ENCODE Processing Pipeline 6449adec7a97b40fc1ef56c1b2c0801f https://www.encodeproject.org/files/ENCFF421QRG/@@download/ENCFF421QRG.bigBed GRCh38 released experiment not submitted to GEO partially characterized antibody ENCFF391TLZ bigBed narrowPeak optimal idr thresholded peaks ENCSR594SMP ChIP-seq EFO:0002067 K562 cell line Homo sapiens PHF20-human ENCAB791UJZ DNA False 2018-01-26 ENCODE 1, 2 ENCFF259HUS 649234 ENCODE Processing Pipeline 7655dc9b77641bfd6f00ac4becc8ec5f https://www.encodeproject.org/files/ENCFF391TLZ/@@download/ENCFF391TLZ.bigBed GRCh38 released experiment not submitted to GEO partially characterized antibody ENCFF161FHO fastq reads ENCSR222MYK ChIP-seq EFO:0002067 K562 cell line Homo sapiens SRSF7-human ENCAB910DVS DNA SDS formaldehyde False 2017-08-17 ENCODE 1 1 40 single-ended 577417312 Xiang-Dong Fu, UCSD 9c66223f7e86614ab56c0c889eaf3029 SRA:SRR6212862 https://www.encodeproject.org/files/ENCFF161FHO/@@download/ENCFF161FHO.fastq.gz Illumina HiSeq 2000 /files/ENCFF911KYO/ released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length ENCFF127HYV fastq reads ENCSR222MYK ChIP-seq EFO:0002067 K562 cell line Homo sapiens SRSF7-human ENCAB910DVS DNA SDS formaldehyde False 2017-08-17 ENCODE 2 1 40 single-ended 483075621 Xiang-Dong Fu, UCSD d62f65cd98b5ccc5ccc23215ee1fbdb9 SRA:SRR6212861 https://www.encodeproject.org/files/ENCFF127HYV/@@download/ENCFF127HYV.fastq.gz Illumina HiSeq 2000 /files/ENCFF113ZAT/ released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length ENCFF600TNX bam alignments ENCSR222MYK ChIP-seq EFO:0002067 K562 cell line Homo sapiens SRSF7-human ENCAB910DVS DNA SDS formaldehyde False 2017-08-17 ENCODE 1 ENCFF161FHO, ENCFF807MUK 540523904 ENCODE Processing Pipeline a37e4a0e1741cf4e8dde712ae3e2ce0b https://www.encodeproject.org/files/ENCFF600TNX/@@download/ENCFF600TNX.bam hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length ENCFF720XTH bam alignments ENCSR222MYK ChIP-seq EFO:0002067 K562 cell line Homo sapiens SRSF7-human ENCAB910DVS DNA SDS formaldehyde False 2017-08-17 ENCODE 2 ENCFF127HYV, ENCFF807MUK 401466469 ENCODE Processing Pipeline 4f9f132604d64478cf78abc4aa405338 https://www.encodeproject.org/files/ENCFF720XTH/@@download/ENCFF720XTH.bam hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length ENCFF031UQD bam unfiltered alignments ENCSR222MYK ChIP-seq EFO:0002067 K562 cell line Homo sapiens SRSF7-human ENCAB910DVS DNA SDS formaldehyde False 2017-08-17 ENCODE 1 ENCFF161FHO, ENCFF643CGH 815325107 ENCODE Processing Pipeline 7ef9742a63e59133b2c8c4f0beddedef https://www.encodeproject.org/files/ENCFF031UQD/@@download/ENCFF031UQD.bam GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length ENCFF716DBD bam unfiltered alignments ENCSR222MYK ChIP-seq EFO:0002067 K562 cell line Homo sapiens SRSF7-human ENCAB910DVS DNA SDS formaldehyde False 2017-08-17 ENCODE 2 ENCFF127HYV, ENCFF643CGH 663654968 ENCODE Processing Pipeline 933d4eb295116f9580e4cc4de3f0759c https://www.encodeproject.org/files/ENCFF716DBD/@@download/ENCFF716DBD.bam GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length ENCFF440PPR bam alignments ENCSR222MYK ChIP-seq EFO:0002067 K562 cell line Homo sapiens SRSF7-human ENCAB910DVS DNA SDS formaldehyde False 2017-08-17 ENCODE 1 ENCFF161FHO, ENCFF643CGH 539985296 ENCODE Processing Pipeline e0d055aa76a98c5ffe9848cd89e5bfa0 https://www.encodeproject.org/files/ENCFF440PPR/@@download/ENCFF440PPR.bam GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length ENCFF572MUD bam alignments ENCSR222MYK ChIP-seq EFO:0002067 K562 cell line Homo sapiens SRSF7-human ENCAB910DVS DNA SDS formaldehyde False 2017-08-17 ENCODE 2 ENCFF127HYV, ENCFF643CGH 401009288 ENCODE Processing Pipeline b059c4aa1df3533a20cc4e31765da0ba https://www.encodeproject.org/files/ENCFF572MUD/@@download/ENCFF572MUD.bam GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length ENCFF964DJM bigWig signal p-value ENCSR222MYK ChIP-seq EFO:0002067 K562 cell line Homo sapiens SRSF7-human ENCAB910DVS DNA SDS formaldehyde False 2017-08-17 ENCODE 2 ENCFF720XTH, ENCFF922JGL 440667592 ENCODE Processing Pipeline b4c9f73d628c9b3181ef18041c890bbf https://www.encodeproject.org/files/ENCFF964DJM/@@download/ENCFF964DJM.bigWig hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length ENCFF130UBB bigWig fold change over control ENCSR222MYK ChIP-seq EFO:0002067 K562 cell line Homo sapiens SRSF7-human ENCAB910DVS DNA SDS formaldehyde False 2017-08-17 ENCODE 1, 2 ENCFF600TNX, ENCFF720XTH, ENCFF851QFR, ENCFF922JGL 766171322 ENCODE Processing Pipeline a380282487c37473be24a445988aaa89 https://www.encodeproject.org/files/ENCFF130UBB/@@download/ENCFF130UBB.bigWig hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length ENCFF029IKY bigWig signal p-value ENCSR222MYK ChIP-seq EFO:0002067 K562 cell line Homo sapiens SRSF7-human ENCAB910DVS DNA SDS formaldehyde False 2017-08-17 ENCODE 2 ENCFF438FAN, ENCFF572MUD 445058524 ENCODE Processing Pipeline dea1afa0341727062ed29fe93e013e1d https://www.encodeproject.org/files/ENCFF029IKY/@@download/ENCFF029IKY.bigWig GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length ENCFF589TAO bigWig signal p-value ENCSR222MYK ChIP-seq EFO:0002067 K562 cell line Homo sapiens SRSF7-human ENCAB910DVS DNA SDS formaldehyde False 2017-08-17 ENCODE 1 ENCFF600TNX, ENCFF851QFR 475895865 ENCODE Processing Pipeline 62916c94b7da8e92b013e4b146f13df9 https://www.encodeproject.org/files/ENCFF589TAO/@@download/ENCFF589TAO.bigWig hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length ENCFF111TXR bigWig fold change over control ENCSR222MYK ChIP-seq EFO:0002067 K562 cell line Homo sapiens SRSF7-human ENCAB910DVS DNA SDS formaldehyde False 2017-08-17 ENCODE 1 ENCFF600TNX, ENCFF851QFR 359644825 ENCODE Processing Pipeline 44fe712ff358e19043eebd7c3e288645 https://www.encodeproject.org/files/ENCFF111TXR/@@download/ENCFF111TXR.bigWig hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length ENCFF555GJI bigBed narrowPeak peaks ENCSR222MYK ChIP-seq EFO:0002067 K562 cell line Homo sapiens SRSF7-human ENCAB910DVS DNA SDS formaldehyde False 2017-08-17 ENCODE 1, 2 ENCFF128NOD 11380604 ENCODE Processing Pipeline c09f69a725d183f5e0be4935a2bc3e4c https://www.encodeproject.org/files/ENCFF555GJI/@@download/ENCFF555GJI.bigBed hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length ENCFF041XBV bigWig signal p-value ENCSR222MYK ChIP-seq EFO:0002067 K562 cell line Homo sapiens SRSF7-human ENCAB910DVS DNA SDS formaldehyde False 2017-08-17 ENCODE 1 ENCFF102RVF, ENCFF440PPR 447707992 ENCODE Processing Pipeline 115fef29c7e2fbc2c1487a7575b3e20e https://www.encodeproject.org/files/ENCFF041XBV/@@download/ENCFF041XBV.bigWig GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length ENCFF287CQO bigWig fold change over control ENCSR222MYK ChIP-seq EFO:0002067 K562 cell line Homo sapiens SRSF7-human ENCAB910DVS DNA SDS formaldehyde False 2017-08-17 ENCODE 1 ENCFF102RVF, ENCFF440PPR 354822722 ENCODE Processing Pipeline c3c5372280b2bba3ea82128bb584be2a https://www.encodeproject.org/files/ENCFF287CQO/@@download/ENCFF287CQO.bigWig GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length ENCFF071HOZ bigWig signal p-value ENCSR222MYK ChIP-seq EFO:0002067 K562 cell line Homo sapiens SRSF7-human ENCAB910DVS DNA SDS formaldehyde False 2017-08-17 ENCODE 1, 2 ENCFF600TNX, ENCFF720XTH, ENCFF851QFR, ENCFF922JGL 885460737 ENCODE Processing Pipeline 45514a0fb03636e901b7841f5cb548d4 https://www.encodeproject.org/files/ENCFF071HOZ/@@download/ENCFF071HOZ.bigWig hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length ENCFF128NOD bed narrowPeak peaks ENCSR222MYK ChIP-seq EFO:0002067 K562 cell line Homo sapiens SRSF7-human ENCAB910DVS DNA SDS formaldehyde False 2017-08-17 ENCODE 1, 2 ENCFF600TNX, ENCFF720XTH, ENCFF851QFR, ENCFF922JGL 6011116 ENCODE Processing Pipeline c3f9c468c4d0e6c12d9fc5a75a3e35c9 https://www.encodeproject.org/files/ENCFF128NOD/@@download/ENCFF128NOD.bed.gz hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length ENCFF108VFC bigBed narrowPeak peaks ENCSR222MYK ChIP-seq EFO:0002067 K562 cell line Homo sapiens SRSF7-human ENCAB910DVS DNA SDS formaldehyde False 2017-08-17 ENCODE 1 ENCFF037TEH 10981212 ENCODE Processing Pipeline 513e3526ac73251609a3a66680fb8aa1 https://www.encodeproject.org/files/ENCFF108VFC/@@download/ENCFF108VFC.bigBed hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length ENCFF866KWV bigBed narrowPeak peaks ENCSR222MYK ChIP-seq EFO:0002067 K562 cell line Homo sapiens SRSF7-human ENCAB910DVS DNA SDS formaldehyde False 2017-08-17 ENCODE 2 ENCFF087ZHG 10908366 ENCODE Processing Pipeline 759d0f540e9d7d26691d822bdd5d5004 https://www.encodeproject.org/files/ENCFF866KWV/@@download/ENCFF866KWV.bigBed hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length ENCFF318AVP bigBed narrowPeak peaks ENCSR222MYK ChIP-seq EFO:0002067 K562 cell line Homo sapiens SRSF7-human ENCAB910DVS DNA SDS formaldehyde False 2017-08-17 ENCODE 1 ENCFF615GWF 10975122 ENCODE Processing Pipeline 4c04b340c019473328d6be654aa20307 https://www.encodeproject.org/files/ENCFF318AVP/@@download/ENCFF318AVP.bigBed GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length ENCFF059WVE bed narrowPeak optimal idr thresholded peaks ENCSR222MYK ChIP-seq EFO:0002067 K562 cell line Homo sapiens SRSF7-human ENCAB910DVS DNA SDS formaldehyde False 2017-08-17 ENCODE 1, 2 ENCFF001TDO, ENCFF037TEH, ENCFF087ZHG, ENCFF128NOD 3792 ENCODE Processing Pipeline c8eb54c4d7c2c6737f7bfd9b2edb9df1 https://www.encodeproject.org/files/ENCFF059WVE/@@download/ENCFF059WVE.bed.gz hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length ENCFF615GWF bed narrowPeak peaks ENCSR222MYK ChIP-seq EFO:0002067 K562 cell line Homo sapiens SRSF7-human ENCAB910DVS DNA SDS formaldehyde False 2017-08-17 ENCODE 1 ENCFF102RVF, ENCFF440PPR 4566299 ENCODE Processing Pipeline 94889ae5ebeb529e942cd4cbdb47bae2 https://www.encodeproject.org/files/ENCFF615GWF/@@download/ENCFF615GWF.bed.gz GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length ENCFF584SCO bed narrowPeak peaks ENCSR222MYK ChIP-seq EFO:0002067 K562 cell line Homo sapiens SRSF7-human ENCAB910DVS DNA SDS formaldehyde False 2017-08-17 ENCODE 1, 2 ENCFF102RVF, ENCFF438FAN, ENCFF440PPR, ENCFF572MUD 5834074 ENCODE Processing Pipeline 65d7e4b2ede57f15b31f432d844bbd29 https://www.encodeproject.org/files/ENCFF584SCO/@@download/ENCFF584SCO.bed.gz GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length ENCFF020OIR bigWig fold change over control ENCSR222MYK ChIP-seq EFO:0002067 K562 cell line Homo sapiens SRSF7-human ENCAB910DVS DNA SDS formaldehyde False 2017-08-17 ENCODE 2 ENCFF720XTH, ENCFF922JGL 291817292 ENCODE Processing Pipeline 0852f43ca8c6b538e7e063c8b2de1db8 https://www.encodeproject.org/files/ENCFF020OIR/@@download/ENCFF020OIR.bigWig hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length ENCFF037TEH bed narrowPeak peaks ENCSR222MYK ChIP-seq EFO:0002067 K562 cell line Homo sapiens SRSF7-human ENCAB910DVS DNA SDS formaldehyde False 2017-08-17 ENCODE 1 ENCFF600TNX, ENCFF851QFR 4712573 ENCODE Processing Pipeline 413e4b43f19533fd13950fe6e55cbefb https://www.encodeproject.org/files/ENCFF037TEH/@@download/ENCFF037TEH.bed.gz hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length ENCFF087ZHG bed narrowPeak peaks ENCSR222MYK ChIP-seq EFO:0002067 K562 cell line Homo sapiens SRSF7-human ENCAB910DVS DNA SDS formaldehyde False 2017-08-17 ENCODE 2 ENCFF720XTH, ENCFF922JGL 4742599 ENCODE Processing Pipeline 961998556f5c583d5de4ee3724b5d690 https://www.encodeproject.org/files/ENCFF087ZHG/@@download/ENCFF087ZHG.bed.gz hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length ENCFF295KEI bed narrowPeak conservative idr thresholded peaks ENCSR222MYK ChIP-seq EFO:0002067 K562 cell line Homo sapiens SRSF7-human ENCAB910DVS DNA SDS formaldehyde False 2017-08-17 ENCODE 1, 2 ENCFF001TDO, ENCFF037TEH, ENCFF087ZHG, ENCFF128NOD 3296 ENCODE Processing Pipeline 28ebd8fe23ddb1b44088609908879ade https://www.encodeproject.org/files/ENCFF295KEI/@@download/ENCFF295KEI.bed.gz hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length ENCFF797YXH bigBed narrowPeak conservative idr thresholded peaks ENCSR222MYK ChIP-seq EFO:0002067 K562 cell line Homo sapiens SRSF7-human ENCAB910DVS DNA SDS formaldehyde False 2017-08-17 ENCODE 1, 2 ENCFF295KEI 78866 ENCODE Processing Pipeline c3f0e913031cd2da8d3b531b236af21c https://www.encodeproject.org/files/ENCFF797YXH/@@download/ENCFF797YXH.bigBed hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length ENCFF560KJC bigBed narrowPeak optimal idr thresholded peaks ENCSR222MYK ChIP-seq EFO:0002067 K562 cell line Homo sapiens SRSF7-human ENCAB910DVS DNA SDS formaldehyde False 2017-08-17 ENCODE 1, 2 ENCFF059WVE 56811 ENCODE Processing Pipeline e23c0eafd1e3c70889497a9451719bbb https://www.encodeproject.org/files/ENCFF560KJC/@@download/ENCFF560KJC.bigBed hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length ENCFF429IRH bigBed narrowPeak peaks ENCSR222MYK ChIP-seq EFO:0002067 K562 cell line Homo sapiens SRSF7-human ENCAB910DVS DNA SDS formaldehyde False 2017-08-17 ENCODE 1, 2 ENCFF584SCO 11428001 ENCODE Processing Pipeline 6e4fa23f1fc8ec8820d88c90044a855a https://www.encodeproject.org/files/ENCFF429IRH/@@download/ENCFF429IRH.bigBed GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length ENCFF774NSL bigWig signal p-value ENCSR222MYK ChIP-seq EFO:0002067 K562 cell line Homo sapiens SRSF7-human ENCAB910DVS DNA SDS formaldehyde False 2017-08-17 ENCODE 1, 2 ENCFF102RVF, ENCFF438FAN, ENCFF440PPR, ENCFF572MUD 897468461 ENCODE Processing Pipeline 9dba44026adef2203e2696782cd3a123 https://www.encodeproject.org/files/ENCFF774NSL/@@download/ENCFF774NSL.bigWig GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length ENCFF129NIH bigWig fold change over control ENCSR222MYK ChIP-seq EFO:0002067 K562 cell line Homo sapiens SRSF7-human ENCAB910DVS DNA SDS formaldehyde False 2017-08-17 ENCODE 1, 2 ENCFF102RVF, ENCFF438FAN, ENCFF440PPR, ENCFF572MUD 800368188 ENCODE Processing Pipeline 1d8625467d1a88dd3296e83cff45553f https://www.encodeproject.org/files/ENCFF129NIH/@@download/ENCFF129NIH.bigWig GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length ENCFF464HMJ bed narrowPeak peaks ENCSR222MYK ChIP-seq EFO:0002067 K562 cell line Homo sapiens SRSF7-human ENCAB910DVS DNA SDS formaldehyde False 2017-08-17 ENCODE 2 ENCFF438FAN, ENCFF572MUD 4693901 ENCODE Processing Pipeline 4bb9ce8faf21c4781e0c097edc45d4dc https://www.encodeproject.org/files/ENCFF464HMJ/@@download/ENCFF464HMJ.bed.gz GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length ENCFF397XSH bigWig fold change over control ENCSR222MYK ChIP-seq EFO:0002067 K562 cell line Homo sapiens SRSF7-human ENCAB910DVS DNA SDS formaldehyde False 2017-08-17 ENCODE 2 ENCFF438FAN, ENCFF572MUD 305673191 ENCODE Processing Pipeline 264b02ea7da8c2e736262f4abc9dc8fa https://www.encodeproject.org/files/ENCFF397XSH/@@download/ENCFF397XSH.bigWig GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length ENCFF973ITD bed narrowPeak conservative idr thresholded peaks ENCSR222MYK ChIP-seq EFO:0002067 K562 cell line Homo sapiens SRSF7-human ENCAB910DVS DNA SDS formaldehyde False 2017-08-17 ENCODE 1, 2 ENCFF419RSJ, ENCFF464HMJ, ENCFF584SCO, ENCFF615GWF 3650 ENCODE Processing Pipeline bc5485ff2d3898c1cd2b74a35d9b0a72 https://www.encodeproject.org/files/ENCFF973ITD/@@download/ENCFF973ITD.bed.gz GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length ENCFF168ZCS bigBed narrowPeak conservative idr thresholded peaks ENCSR222MYK ChIP-seq EFO:0002067 K562 cell line Homo sapiens SRSF7-human ENCAB910DVS DNA SDS formaldehyde False 2017-08-17 ENCODE 1, 2 ENCFF973ITD 88262 ENCODE Processing Pipeline 03b8cb4c6eb6db189e3641bc3e2c22ef https://www.encodeproject.org/files/ENCFF168ZCS/@@download/ENCFF168ZCS.bigBed GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length ENCFF589UQA bigBed narrowPeak peaks ENCSR222MYK ChIP-seq EFO:0002067 K562 cell line Homo sapiens SRSF7-human ENCAB910DVS DNA SDS formaldehyde False 2017-08-17 ENCODE 2 ENCFF464HMJ 10923955 ENCODE Processing Pipeline 574cd7ec4c0e197dc01c4d2415f36045 https://www.encodeproject.org/files/ENCFF589UQA/@@download/ENCFF589UQA.bigBed GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length ENCFF550VUN bed narrowPeak optimal idr thresholded peaks ENCSR222MYK ChIP-seq EFO:0002067 K562 cell line Homo sapiens SRSF7-human ENCAB910DVS DNA SDS formaldehyde False 2017-08-17 ENCODE 1, 2 ENCFF419RSJ, ENCFF464HMJ, ENCFF584SCO, ENCFF615GWF 5162 ENCODE Processing Pipeline 22be748c7ce99137b1a2334377921a91 https://www.encodeproject.org/files/ENCFF550VUN/@@download/ENCFF550VUN.bed.gz GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length ENCFF101IEH bigBed narrowPeak optimal idr thresholded peaks ENCSR222MYK ChIP-seq EFO:0002067 K562 cell line Homo sapiens SRSF7-human ENCAB910DVS DNA SDS formaldehyde False 2017-08-17 ENCODE 1, 2 ENCFF550VUN 60004 ENCODE Processing Pipeline 39512148a0e81a683a688e3a5a0377e2 https://www.encodeproject.org/files/ENCFF101IEH/@@download/ENCFF101IEH.bigBed GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length ENCFF771EYZ bam unfiltered alignments ENCSR222MYK ChIP-seq EFO:0002067 K562 cell line Homo sapiens SRSF7-human ENCAB910DVS DNA SDS formaldehyde False 2017-08-17 ENCODE 1 40 ENCFF161FHO, ENCFF807MUK 811807466 ENCODE Processing Pipeline a79c13983e06d60fa9a295efb9086d18 https://www.encodeproject.org/files/ENCFF771EYZ/@@download/ENCFF771EYZ.bam hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length ENCFF401QBU bam unfiltered alignments ENCSR222MYK ChIP-seq EFO:0002067 K562 cell line Homo sapiens SRSF7-human ENCAB910DVS DNA SDS formaldehyde False 2017-08-17 ENCODE 2 40 ENCFF127HYV, ENCFF807MUK 661108605 ENCODE Processing Pipeline 94c1e1bef6b624cf6bc3a353f8b4fb7c https://www.encodeproject.org/files/ENCFF401QBU/@@download/ENCFF401QBU.bam hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length ENCFF143XOC fastq reads ENCSR822CCM ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARID1B-human ENCAB796NDK DNA False 2016-11-30 ENCODE 1 1 100 paired-ended 2 ENCFF575FWJ 2374501002 Michael Snyder, Stanford 441bbe8316aada3d304916adff0d763e https://www.encodeproject.org/files/ENCFF143XOC/@@download/ENCFF143XOC.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFH/ archived inconsistent platforms, mild to moderate bottlenecking, antibody characterized with exemption ENCFF575FWJ fastq reads ENCSR822CCM ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARID1B-human ENCAB796NDK DNA False 2016-11-30 ENCODE 1 1 100 paired-ended 1 ENCFF143XOC 2265133566 Michael Snyder, Stanford 3f573e1e2c421123733314009fc36314 https://www.encodeproject.org/files/ENCFF575FWJ/@@download/ENCFF575FWJ.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFF/ archived inconsistent platforms, mild to moderate bottlenecking, antibody characterized with exemption ENCFF718FBA fastq reads ENCSR822CCM ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARID1B-human ENCAB796NDK DNA False 2016-11-30 ENCODE 2 1 100 paired-ended 1 ENCFF521KBW 5596386807 Michael Snyder, Stanford 909c8c7ea557c09ee798d0de03f7c2a4 SRA:SRR5112390 https://www.encodeproject.org/files/ENCFF718FBA/@@download/ENCFF718FBA.fastq.gz Illumina HiSeq 4000 /files/ENCFF259GQA/ released inconsistent platforms, mild to moderate bottlenecking, antibody characterized with exemption ENCFF521KBW fastq reads ENCSR822CCM ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARID1B-human ENCAB796NDK DNA False 2016-11-30 ENCODE 2 1 100 paired-ended 2 ENCFF718FBA 5947220707 Michael Snyder, Stanford b95e5d8f8c39f0df23626c692d27f6a9 SRA:SRR5112390 https://www.encodeproject.org/files/ENCFF521KBW/@@download/ENCFF521KBW.fastq.gz Illumina HiSeq 4000 /files/ENCFF837MIV/ released inconsistent platforms, mild to moderate bottlenecking, antibody characterized with exemption ENCFF680HKS fastq reads ENCSR822CCM ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARID1B-human ENCAB796NDK DNA False 2016-11-30 ENCODE 1 1 100 paired-ended 1 ENCFF065YSO 3870818087 Michael Snyder, Stanford fe54bc2bac468ea3e0ceae0820343b44 SRA:SRR5112391 https://www.encodeproject.org/files/ENCFF680HKS/@@download/ENCFF680HKS.fastq.gz Illumina HiSeq 4000 /files/ENCFF498JMO/ released inconsistent platforms, mild to moderate bottlenecking, antibody characterized with exemption ENCFF065YSO fastq reads ENCSR822CCM ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARID1B-human ENCAB796NDK DNA False 2016-11-30 ENCODE 1 1 100 paired-ended 2 ENCFF680HKS 4381860076 Michael Snyder, Stanford 1698c940cea8a61fb27f8123255ba68f SRA:SRR5112391 https://www.encodeproject.org/files/ENCFF065YSO/@@download/ENCFF065YSO.fastq.gz Illumina HiSeq 4000 /files/ENCFF502GTS/ released inconsistent platforms, mild to moderate bottlenecking, antibody characterized with exemption ENCFF059JBH bam unfiltered alignments ENCSR822CCM ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARID1B-human ENCAB796NDK DNA False 2016-11-30 ENCODE 1 100 ENCFF065YSO, ENCFF643CGH, ENCFF680HKS 7770309358 ENCODE Processing Pipeline 3c6afe8606b0aa90220f2f8b3481037b https://www.encodeproject.org/files/ENCFF059JBH/@@download/ENCFF059JBH.bam GRCh38 released inconsistent platforms, mild to moderate bottlenecking, antibody characterized with exemption ENCFF058QVM bam unfiltered alignments ENCSR822CCM ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARID1B-human ENCAB796NDK DNA False 2016-11-30 ENCODE 2 100 ENCFF521KBW, ENCFF643CGH, ENCFF718FBA 10440353573 ENCODE Processing Pipeline 636b58b2b65275d93b267b4090a0f4be https://www.encodeproject.org/files/ENCFF058QVM/@@download/ENCFF058QVM.bam GRCh38 released inconsistent platforms, mild to moderate bottlenecking, antibody characterized with exemption ENCFF225IQS bam alignments ENCSR822CCM ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARID1B-human ENCAB796NDK DNA False 2016-11-30 ENCODE 1 100 ENCFF065YSO, ENCFF643CGH, ENCFF680HKS 5739735356 ENCODE Processing Pipeline 702328efedbd5808f72bd0be2a6f7e4c https://www.encodeproject.org/files/ENCFF225IQS/@@download/ENCFF225IQS.bam GRCh38 released inconsistent platforms, mild to moderate bottlenecking, antibody characterized with exemption ENCFF431WVX bam alignments ENCSR822CCM ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARID1B-human ENCAB796NDK DNA False 2016-11-30 ENCODE 2 100 ENCFF521KBW, ENCFF643CGH, ENCFF718FBA 8309162279 ENCODE Processing Pipeline 9a9cdacac615c9559f8780200efca8db https://www.encodeproject.org/files/ENCFF431WVX/@@download/ENCFF431WVX.bam GRCh38 released inconsistent platforms, mild to moderate bottlenecking, antibody characterized with exemption ENCFF749HFW bigWig signal p-value ENCSR822CCM ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARID1B-human ENCAB796NDK DNA False 2016-11-30 ENCODE 1 ENCFF225IQS, ENCFF712WXB, ENCFF790TAN 1869012738 ENCODE Processing Pipeline 92ce22e7f71b4d909da85ba76edfc106 https://www.encodeproject.org/files/ENCFF749HFW/@@download/ENCFF749HFW.bigWig GRCh38 released inconsistent platforms, mild to moderate bottlenecking, antibody characterized with exemption ENCFF242GZG bigWig signal p-value ENCSR822CCM ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARID1B-human ENCAB796NDK DNA False 2016-11-30 ENCODE 1, 2 ENCFF225IQS, ENCFF431WVX, ENCFF712WXB, ENCFF790TAN 2324115267 ENCODE Processing Pipeline cf6c6fc80c028eb00fc2970d2af73cb4 https://www.encodeproject.org/files/ENCFF242GZG/@@download/ENCFF242GZG.bigWig GRCh38 released inconsistent platforms, mild to moderate bottlenecking, antibody characterized with exemption ENCFF475SVI bigWig fold change over control ENCSR822CCM ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARID1B-human ENCAB796NDK DNA False 2016-11-30 ENCODE 1 ENCFF225IQS, ENCFF712WXB, ENCFF790TAN 1991372916 ENCODE Processing Pipeline 647ce568a8bcaa376281ff573c696712 https://www.encodeproject.org/files/ENCFF475SVI/@@download/ENCFF475SVI.bigWig GRCh38 released inconsistent platforms, mild to moderate bottlenecking, antibody characterized with exemption ENCFF952KHP bigWig fold change over control ENCSR822CCM ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARID1B-human ENCAB796NDK DNA False 2016-11-30 ENCODE 2 ENCFF431WVX, ENCFF712WXB 2066114540 ENCODE Processing Pipeline 26cdaa3a5c5a51b8d00a7925d0ead828 https://www.encodeproject.org/files/ENCFF952KHP/@@download/ENCFF952KHP.bigWig GRCh38 released inconsistent platforms, mild to moderate bottlenecking, antibody characterized with exemption ENCFF948INJ bigWig signal p-value ENCSR822CCM ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARID1B-human ENCAB796NDK DNA False 2016-11-30 ENCODE 2 ENCFF431WVX, ENCFF712WXB 1498762254 ENCODE Processing Pipeline d356f4a3e9f987e27c2bef3f929ee2d8 https://www.encodeproject.org/files/ENCFF948INJ/@@download/ENCFF948INJ.bigWig GRCh38 released inconsistent platforms, mild to moderate bottlenecking, antibody characterized with exemption ENCFF691REI bed narrowPeak peaks ENCSR822CCM ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARID1B-human ENCAB796NDK DNA False 2016-11-30 ENCODE 1 ENCFF225IQS, ENCFF712WXB, ENCFF790TAN 7214076 ENCODE Processing Pipeline aba487b064ca0d42248f8185ff040d18 https://www.encodeproject.org/files/ENCFF691REI/@@download/ENCFF691REI.bed.gz GRCh38 released inconsistent platforms, mild to moderate bottlenecking, antibody characterized with exemption ENCFF849KQZ bigBed narrowPeak peaks ENCSR822CCM ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARID1B-human ENCAB796NDK DNA False 2016-11-30 ENCODE 1 ENCFF691REI 13276138 ENCODE Processing Pipeline 321b7a232b3a5c42c8aaceb820ffbfae https://www.encodeproject.org/files/ENCFF849KQZ/@@download/ENCFF849KQZ.bigBed GRCh38 released inconsistent platforms, mild to moderate bottlenecking, antibody characterized with exemption ENCFF697GTL bigWig fold change over control ENCSR822CCM ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARID1B-human ENCAB796NDK DNA False 2016-11-30 ENCODE 1, 2 ENCFF225IQS, ENCFF431WVX, ENCFF712WXB, ENCFF790TAN 4023271218 ENCODE Processing Pipeline a87f8196a38fc1d7345d78507f2cf960 https://www.encodeproject.org/files/ENCFF697GTL/@@download/ENCFF697GTL.bigWig GRCh38 released inconsistent platforms, mild to moderate bottlenecking, antibody characterized with exemption ENCFF327LXL bigBed narrowPeak peaks ENCSR822CCM ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARID1B-human ENCAB796NDK DNA False 2016-11-30 ENCODE 2 ENCFF552EXM 13065621 ENCODE Processing Pipeline 024ec6fd0ea4ebe41e270f646610b352 https://www.encodeproject.org/files/ENCFF327LXL/@@download/ENCFF327LXL.bigBed GRCh38 released inconsistent platforms, mild to moderate bottlenecking, antibody characterized with exemption ENCFF501OLA bigBed narrowPeak conservative idr thresholded peaks ENCSR822CCM ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARID1B-human ENCAB796NDK DNA False 2016-11-30 ENCODE 1, 2 ENCFF771TNK 1605944 ENCODE Processing Pipeline 5a3e012b881e4e52a6afba43ecf4800b https://www.encodeproject.org/files/ENCFF501OLA/@@download/ENCFF501OLA.bigBed GRCh38 released inconsistent platforms, mild to moderate bottlenecking, antibody characterized with exemption ENCFF552EXM bed narrowPeak peaks ENCSR822CCM ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARID1B-human ENCAB796NDK DNA False 2016-11-30 ENCODE 2 ENCFF431WVX, ENCFF712WXB 7272664 ENCODE Processing Pipeline f8e880a523f52386876cff40ca1af644 https://www.encodeproject.org/files/ENCFF552EXM/@@download/ENCFF552EXM.bed.gz GRCh38 released inconsistent platforms, mild to moderate bottlenecking, antibody characterized with exemption ENCFF446XYW bed narrowPeak peaks ENCSR822CCM ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARID1B-human ENCAB796NDK DNA False 2016-11-30 ENCODE 1, 2 ENCFF225IQS, ENCFF431WVX, ENCFF712WXB, ENCFF790TAN 7315665 ENCODE Processing Pipeline 0c80bfb3dcca65c9b77c3073f3d48c63 https://www.encodeproject.org/files/ENCFF446XYW/@@download/ENCFF446XYW.bed.gz GRCh38 released inconsistent platforms, mild to moderate bottlenecking, antibody characterized with exemption ENCFF808LSS bigBed narrowPeak optimal idr thresholded peaks ENCSR822CCM ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARID1B-human ENCAB796NDK DNA False 2016-11-30 ENCODE 1, 2 ENCFF249TYS 1662898 ENCODE Processing Pipeline 57beeb4720165b3ac1ef8a39c01fdd9f https://www.encodeproject.org/files/ENCFF808LSS/@@download/ENCFF808LSS.bigBed GRCh38 released inconsistent platforms, mild to moderate bottlenecking, antibody characterized with exemption ENCFF652NMQ bigBed narrowPeak peaks ENCSR822CCM ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARID1B-human ENCAB796NDK DNA False 2016-11-30 ENCODE 1, 2 ENCFF446XYW 13225450 ENCODE Processing Pipeline 25cd41a3e38b829b5817a48ac878ce68 https://www.encodeproject.org/files/ENCFF652NMQ/@@download/ENCFF652NMQ.bigBed GRCh38 released inconsistent platforms, mild to moderate bottlenecking, antibody characterized with exemption ENCFF771TNK bed narrowPeak conservative idr thresholded peaks ENCSR822CCM ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARID1B-human ENCAB796NDK DNA False 2016-11-30 ENCODE 1, 2 ENCFF419RSJ, ENCFF446XYW, ENCFF552EXM, ENCFF691REI 881511 ENCODE Processing Pipeline 346d1e87400370765de81d3202d3c139 https://www.encodeproject.org/files/ENCFF771TNK/@@download/ENCFF771TNK.bed.gz GRCh38 released inconsistent platforms, mild to moderate bottlenecking, antibody characterized with exemption ENCFF249TYS bed narrowPeak optimal idr thresholded peaks ENCSR822CCM ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARID1B-human ENCAB796NDK DNA False 2016-11-30 ENCODE 1, 2 ENCFF419RSJ, ENCFF446XYW, ENCFF552EXM, ENCFF691REI 912130 ENCODE Processing Pipeline f66a6d097165ef7e610fde9a4db94da0 https://www.encodeproject.org/files/ENCFF249TYS/@@download/ENCFF249TYS.bed.gz GRCh38 released inconsistent platforms, mild to moderate bottlenecking, antibody characterized with exemption ENCFF503INV bam alignments ENCSR822CCM ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARID1B-human ENCAB796NDK DNA False 2016-11-30 ENCODE 1 100 ENCFF065YSO, ENCFF680HKS, ENCFF807MUK 5734287253 ENCODE Processing Pipeline 33f2dc9637d9686fe7a7883208f58a61 https://www.encodeproject.org/files/ENCFF503INV/@@download/ENCFF503INV.bam hg19 released inconsistent platforms, mild to moderate bottlenecking, antibody characterized with exemption ENCFF717EXO bam unfiltered alignments ENCSR822CCM ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARID1B-human ENCAB796NDK DNA False 2016-11-30 ENCODE 1 100 ENCFF065YSO, ENCFF680HKS, ENCFF807MUK 7765911486 ENCODE Processing Pipeline 347eb76c4c409e86c8c07520986a5160 https://www.encodeproject.org/files/ENCFF717EXO/@@download/ENCFF717EXO.bam hg19 released inconsistent platforms, mild to moderate bottlenecking, antibody characterized with exemption ENCFF390AYA bam unfiltered alignments ENCSR822CCM ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARID1B-human ENCAB796NDK DNA False 2016-11-30 ENCODE 2 100 ENCFF521KBW, ENCFF718FBA, ENCFF807MUK 10431089706 ENCODE Processing Pipeline 0ec0586985a462a08bfe1b42d3a45fca https://www.encodeproject.org/files/ENCFF390AYA/@@download/ENCFF390AYA.bam hg19 released inconsistent platforms, mild to moderate bottlenecking, antibody characterized with exemption ENCFF919XGC bam alignments ENCSR822CCM ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARID1B-human ENCAB796NDK DNA False 2016-11-30 ENCODE 2 100 ENCFF521KBW, ENCFF718FBA, ENCFF807MUK 8300669941 ENCODE Processing Pipeline 3d66cc6c02e3f2034d890763cffae05b https://www.encodeproject.org/files/ENCFF919XGC/@@download/ENCFF919XGC.bam hg19 released inconsistent platforms, mild to moderate bottlenecking, antibody characterized with exemption ENCFF816UMH bigWig fold change over control ENCSR822CCM ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARID1B-human ENCAB796NDK DNA False 2016-11-30 ENCODE 1 ENCFF160VXC, ENCFF503INV, ENCFF834TUP 1994756377 ENCODE Processing Pipeline 2d099f1421b538a0f4810af6e8ae73b6 https://www.encodeproject.org/files/ENCFF816UMH/@@download/ENCFF816UMH.bigWig hg19 released inconsistent platforms, mild to moderate bottlenecking, antibody characterized with exemption ENCFF472FJF bigWig fold change over control ENCSR822CCM ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARID1B-human ENCAB796NDK DNA False 2016-11-30 ENCODE 2 ENCFF834TUP, ENCFF919XGC 2061373733 ENCODE Processing Pipeline 1cb43bf7d01e527fda92d6f5d4bf0c2c https://www.encodeproject.org/files/ENCFF472FJF/@@download/ENCFF472FJF.bigWig hg19 released inconsistent platforms, mild to moderate bottlenecking, antibody characterized with exemption ENCFF231SVC bed narrowPeak peaks ENCSR822CCM ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARID1B-human ENCAB796NDK DNA False 2016-11-30 ENCODE 1 ENCFF160VXC, ENCFF503INV, ENCFF834TUP 7236685 ENCODE Processing Pipeline 627b7ac1338041ecaa9fb192e32943f6 https://www.encodeproject.org/files/ENCFF231SVC/@@download/ENCFF231SVC.bed.gz hg19 released inconsistent platforms, mild to moderate bottlenecking, antibody characterized with exemption ENCFF603CDR bigWig signal p-value ENCSR822CCM ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARID1B-human ENCAB796NDK DNA False 2016-11-30 ENCODE 1 ENCFF160VXC, ENCFF503INV, ENCFF834TUP 1588671420 ENCODE Processing Pipeline f65b03ea08205c12418bc03557438b07 https://www.encodeproject.org/files/ENCFF603CDR/@@download/ENCFF603CDR.bigWig hg19 released inconsistent platforms, mild to moderate bottlenecking, antibody characterized with exemption ENCFF118ZSL bed narrowPeak peaks ENCSR822CCM ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARID1B-human ENCAB796NDK DNA False 2016-11-30 ENCODE 1, 2 ENCFF160VXC, ENCFF503INV, ENCFF834TUP, ENCFF919XGC 7343115 ENCODE Processing Pipeline 05b1b1752d0dbbb3cab40f575ad26578 https://www.encodeproject.org/files/ENCFF118ZSL/@@download/ENCFF118ZSL.bed.gz hg19 released inconsistent platforms, mild to moderate bottlenecking, antibody characterized with exemption ENCFF184ZPW bigWig signal p-value ENCSR822CCM ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARID1B-human ENCAB796NDK DNA False 2016-11-30 ENCODE 1, 2 ENCFF160VXC, ENCFF503INV, ENCFF834TUP, ENCFF919XGC 2321167039 ENCODE Processing Pipeline cc913947519987a344f49bba55158a57 https://www.encodeproject.org/files/ENCFF184ZPW/@@download/ENCFF184ZPW.bigWig hg19 released inconsistent platforms, mild to moderate bottlenecking, antibody characterized with exemption ENCFF429LRK bigBed narrowPeak peaks ENCSR822CCM ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARID1B-human ENCAB796NDK DNA False 2016-11-30 ENCODE 1, 2 ENCFF118ZSL 13262607 ENCODE Processing Pipeline 5f22ae809fc36ca54cf377081697361a https://www.encodeproject.org/files/ENCFF429LRK/@@download/ENCFF429LRK.bigBed hg19 released inconsistent platforms, mild to moderate bottlenecking, antibody characterized with exemption ENCFF238CLX bigBed narrowPeak conservative idr thresholded peaks ENCSR822CCM ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARID1B-human ENCAB796NDK DNA False 2016-11-30 ENCODE 1, 2 ENCFF676SJQ 2029145 ENCODE Processing Pipeline a63e72e7c50a3ecfe5f64613ffb95368 https://www.encodeproject.org/files/ENCFF238CLX/@@download/ENCFF238CLX.bigBed hg19 released inconsistent platforms, mild to moderate bottlenecking, antibody characterized with exemption ENCFF230WZC bigBed narrowPeak optimal idr thresholded peaks ENCSR822CCM ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARID1B-human ENCAB796NDK DNA False 2016-11-30 ENCODE 1, 2 ENCFF225MPC 1688007 ENCODE Processing Pipeline ef854279053e12a6141a769d93cdd7ed https://www.encodeproject.org/files/ENCFF230WZC/@@download/ENCFF230WZC.bigBed hg19 released inconsistent platforms, mild to moderate bottlenecking, antibody characterized with exemption ENCFF548LQF bigWig signal p-value ENCSR822CCM ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARID1B-human ENCAB796NDK DNA False 2016-11-30 ENCODE 2 ENCFF834TUP, ENCFF919XGC 1496424884 ENCODE Processing Pipeline 9bfcb063c6b65a135e22ba2f6b706004 https://www.encodeproject.org/files/ENCFF548LQF/@@download/ENCFF548LQF.bigWig hg19 released inconsistent platforms, mild to moderate bottlenecking, antibody characterized with exemption ENCFF117TVE bigBed narrowPeak peaks ENCSR822CCM ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARID1B-human ENCAB796NDK DNA False 2016-11-30 ENCODE 1 ENCFF231SVC 13300243 ENCODE Processing Pipeline 3a136ebaf61ab6cbf6e9744d9646124a https://www.encodeproject.org/files/ENCFF117TVE/@@download/ENCFF117TVE.bigBed hg19 released inconsistent platforms, mild to moderate bottlenecking, antibody characterized with exemption ENCFF750FNO bigWig fold change over control ENCSR822CCM ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARID1B-human ENCAB796NDK DNA False 2016-11-30 ENCODE 1, 2 ENCFF160VXC, ENCFF503INV, ENCFF834TUP, ENCFF919XGC 4017941244 ENCODE Processing Pipeline 002223b3bdf9848bed2c95b320a791f3 https://www.encodeproject.org/files/ENCFF750FNO/@@download/ENCFF750FNO.bigWig hg19 released inconsistent platforms, mild to moderate bottlenecking, antibody characterized with exemption ENCFF549JYE bed narrowPeak peaks ENCSR822CCM ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARID1B-human ENCAB796NDK DNA False 2016-11-30 ENCODE 2 ENCFF834TUP, ENCFF919XGC 7294885 ENCODE Processing Pipeline c69725cc8f688211356ca018373a030c https://www.encodeproject.org/files/ENCFF549JYE/@@download/ENCFF549JYE.bed.gz hg19 released inconsistent platforms, mild to moderate bottlenecking, antibody characterized with exemption ENCFF216AZW bigBed narrowPeak peaks ENCSR822CCM ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARID1B-human ENCAB796NDK DNA False 2016-11-30 ENCODE 2 ENCFF549JYE 13089804 ENCODE Processing Pipeline a5eb65b5553b22534326123ded79dc6d https://www.encodeproject.org/files/ENCFF216AZW/@@download/ENCFF216AZW.bigBed hg19 released inconsistent platforms, mild to moderate bottlenecking, antibody characterized with exemption ENCFF676SJQ bed narrowPeak conservative idr thresholded peaks ENCSR822CCM ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARID1B-human ENCAB796NDK DNA False 2016-11-30 ENCODE 1, 2 ENCFF001TDO, ENCFF118ZSL, ENCFF231SVC, ENCFF549JYE 886667 ENCODE Processing Pipeline c3aae66271a63c709411d06c1b21a7e8 https://www.encodeproject.org/files/ENCFF676SJQ/@@download/ENCFF676SJQ.bed.gz hg19 released inconsistent platforms, mild to moderate bottlenecking, antibody characterized with exemption ENCFF225MPC bed narrowPeak optimal idr thresholded peaks ENCSR822CCM ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARID1B-human ENCAB796NDK DNA False 2016-11-30 ENCODE 1, 2 ENCFF001TDO, ENCFF118ZSL, ENCFF231SVC, ENCFF549JYE 928168 ENCODE Processing Pipeline cfb2dc624b924c1459c00c31b9d67fff https://www.encodeproject.org/files/ENCFF225MPC/@@download/ENCFF225MPC.bed.gz hg19 released inconsistent platforms, mild to moderate bottlenecking, antibody characterized with exemption ENCFF078GUJ bam unfiltered alignments ENCSR786OQY ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB5-human ENCAB301QZF DNA False 2017-07-28 ENCODE 1 100 ENCFF543AIK, ENCFF807MUK, ENCFF865YPR 5865134556 ENCODE Processing Pipeline e5213107db3a30ef7eca8e6fbc18ed10 https://www.encodeproject.org/files/ENCFF078GUJ/@@download/ENCFF078GUJ.bam hg19 released antibody characterized with exemption ENCFF741AHG bam unfiltered alignments ENCSR786OQY ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB5-human ENCAB301QZF DNA False 2017-07-28 ENCODE 2 100 ENCFF730YIK, ENCFF807MUK, ENCFF861REO 4629897289 ENCODE Processing Pipeline bf15f05d1756008e34b4712aebf8b7b1 https://www.encodeproject.org/files/ENCFF741AHG/@@download/ENCFF741AHG.bam hg19 released antibody characterized with exemption ENCFF861REO fastq reads ENCSR786OQY ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB5-human ENCAB301QZF DNA False 2017-07-28 ENCODE 2 1 100 paired-ended 2 ENCFF730YIK 2089298482 Michael Snyder, Stanford 0cf5b060af1fa08daa2e34f5ccbec898 SRA:SRR6214381 https://www.encodeproject.org/files/ENCFF861REO/@@download/ENCFF861REO.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFA/ released antibody characterized with exemption ENCFF730YIK fastq reads ENCSR786OQY ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB5-human ENCAB301QZF DNA False 2017-07-28 ENCODE 2 1 100 paired-ended 1 ENCFF861REO 2050637005 Michael Snyder, Stanford c2a0191943fb8c8539918c3a47973a5f SRA:SRR6214381 https://www.encodeproject.org/files/ENCFF730YIK/@@download/ENCFF730YIK.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFD/ released antibody characterized with exemption ENCFF865YPR fastq reads ENCSR786OQY ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB5-human ENCAB301QZF DNA False 2017-07-28 ENCODE 1 1 100 paired-ended 1 ENCFF543AIK 2676109101 Michael Snyder, Stanford fcff60fa9c5f104a7ecc9866ce497c38 SRA:SRR6214380 https://www.encodeproject.org/files/ENCFF865YPR/@@download/ENCFF865YPR.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFF/ released antibody characterized with exemption ENCFF543AIK fastq reads ENCSR786OQY ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB5-human ENCAB301QZF DNA False 2017-07-28 ENCODE 1 1 100 paired-ended 2 ENCFF865YPR 2693104827 Michael Snyder, Stanford 2bfe32457461047d548f4caa08c21b62 SRA:SRR6214380 https://www.encodeproject.org/files/ENCFF543AIK/@@download/ENCFF543AIK.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFH/ released antibody characterized with exemption ENCFF829QRY bam alignments ENCSR786OQY ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB5-human ENCAB301QZF DNA False 2017-07-28 ENCODE 1 100 ENCFF543AIK, ENCFF807MUK, ENCFF865YPR 4458037781 ENCODE Processing Pipeline 6acfb72aca06bbc627a05904ffa2b4a3 https://www.encodeproject.org/files/ENCFF829QRY/@@download/ENCFF829QRY.bam hg19 released antibody characterized with exemption ENCFF448ALJ bam alignments ENCSR786OQY ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB5-human ENCAB301QZF DNA False 2017-07-28 ENCODE 2 100 ENCFF730YIK, ENCFF807MUK, ENCFF861REO 4029251972 ENCODE Processing Pipeline c242c39d56d66a3101990689f44302dd https://www.encodeproject.org/files/ENCFF448ALJ/@@download/ENCFF448ALJ.bam hg19 released antibody characterized with exemption ENCFF006HJJ bigWig signal p-value ENCSR786OQY ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB5-human ENCAB301QZF DNA False 2017-07-28 ENCODE 1 ENCFF581ZJL, ENCFF829QRY 1192790733 ENCODE Processing Pipeline 89295be3e92ea548a0d8fa230935022c https://www.encodeproject.org/files/ENCFF006HJJ/@@download/ENCFF006HJJ.bigWig hg19 released antibody characterized with exemption ENCFF460DDB bigWig signal p-value ENCSR786OQY ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB5-human ENCAB301QZF DNA False 2017-07-28 ENCODE 2 ENCFF051LWI, ENCFF448ALJ 1091149459 ENCODE Processing Pipeline f347394102b0f5cd3a552e02bf168114 https://www.encodeproject.org/files/ENCFF460DDB/@@download/ENCFF460DDB.bigWig hg19 released antibody characterized with exemption ENCFF480MGF bigWig signal p-value ENCSR786OQY ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB5-human ENCAB301QZF DNA False 2017-07-28 ENCODE 1, 2 ENCFF051LWI, ENCFF448ALJ, ENCFF581ZJL, ENCFF829QRY 1656280674 ENCODE Processing Pipeline f0654073fcb14c95d235cf9d0d41bb02 https://www.encodeproject.org/files/ENCFF480MGF/@@download/ENCFF480MGF.bigWig hg19 released antibody characterized with exemption ENCFF872UVV bigWig fold change over control ENCSR786OQY ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB5-human ENCAB301QZF DNA False 2017-07-28 ENCODE 1 ENCFF581ZJL, ENCFF829QRY 1200578597 ENCODE Processing Pipeline ceadaf69b4647088bef749cb6ec14089 https://www.encodeproject.org/files/ENCFF872UVV/@@download/ENCFF872UVV.bigWig hg19 released antibody characterized with exemption ENCFF022WST bigWig fold change over control ENCSR786OQY ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB5-human ENCAB301QZF DNA False 2017-07-28 ENCODE 2 ENCFF051LWI, ENCFF448ALJ 1117788025 ENCODE Processing Pipeline 4d6b5f3ee16c83303cf7ba7358794650 https://www.encodeproject.org/files/ENCFF022WST/@@download/ENCFF022WST.bigWig hg19 released antibody characterized with exemption ENCFF477PQL bigWig fold change over control ENCSR786OQY ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB5-human ENCAB301QZF DNA False 2017-07-28 ENCODE 1, 2 ENCFF051LWI, ENCFF448ALJ, ENCFF581ZJL, ENCFF829QRY 2092412548 ENCODE Processing Pipeline 457f123bd3a4e94d0ade3c741992a4d9 https://www.encodeproject.org/files/ENCFF477PQL/@@download/ENCFF477PQL.bigWig hg19 released antibody characterized with exemption ENCFF477OXP bed narrowPeak peaks ENCSR786OQY ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB5-human ENCAB301QZF DNA False 2017-07-28 ENCODE 1 ENCFF581ZJL, ENCFF829QRY 6484621 ENCODE Processing Pipeline fa90de3cfac4674edf9523388e31ccf6 https://www.encodeproject.org/files/ENCFF477OXP/@@download/ENCFF477OXP.bed.gz hg19 released antibody characterized with exemption ENCFF813QIG bed narrowPeak peaks ENCSR786OQY ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB5-human ENCAB301QZF DNA False 2017-07-28 ENCODE 2 ENCFF051LWI, ENCFF448ALJ 6696456 ENCODE Processing Pipeline d3770d1cb49701c8897d34afc573b6a5 https://www.encodeproject.org/files/ENCFF813QIG/@@download/ENCFF813QIG.bed.gz hg19 released antibody characterized with exemption ENCFF131NLL bigBed narrowPeak peaks ENCSR786OQY ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB5-human ENCAB301QZF DNA False 2017-07-28 ENCODE 1 ENCFF477OXP 11280092 ENCODE Processing Pipeline 9b5289d02a8208a118cc3cd75a38c0b0 https://www.encodeproject.org/files/ENCFF131NLL/@@download/ENCFF131NLL.bigBed hg19 released antibody characterized with exemption ENCFF901ECC bed narrowPeak peaks ENCSR786OQY ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB5-human ENCAB301QZF DNA False 2017-07-28 ENCODE 1, 2 ENCFF051LWI, ENCFF448ALJ, ENCFF581ZJL, ENCFF829QRY 7165546 ENCODE Processing Pipeline 8a0ea8c96fbe0c65f8266674e4eee47b https://www.encodeproject.org/files/ENCFF901ECC/@@download/ENCFF901ECC.bed.gz hg19 released antibody characterized with exemption ENCFF417QSI bigBed narrowPeak peaks ENCSR786OQY ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB5-human ENCAB301QZF DNA False 2017-07-28 ENCODE 2 ENCFF813QIG 13233150 ENCODE Processing Pipeline b2244b6cd32888ae84b59e1b762cd51c https://www.encodeproject.org/files/ENCFF417QSI/@@download/ENCFF417QSI.bigBed hg19 released antibody characterized with exemption ENCFF033FPI bigBed narrowPeak peaks ENCSR786OQY ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB5-human ENCAB301QZF DNA False 2017-07-28 ENCODE 1, 2 ENCFF901ECC 13243727 ENCODE Processing Pipeline 0dd740249643dd8d6d96d10ced5d7a3c https://www.encodeproject.org/files/ENCFF033FPI/@@download/ENCFF033FPI.bigBed hg19 released antibody characterized with exemption ENCFF654HDK bed narrowPeak conservative idr thresholded peaks ENCSR786OQY ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB5-human ENCAB301QZF DNA False 2017-07-28 ENCODE 1, 2 ENCFF001TDO, ENCFF477OXP, ENCFF813QIG, ENCFF901ECC 58257 ENCODE Processing Pipeline b4fcb2c12b95f2acee1f9859e70dc1bc https://www.encodeproject.org/files/ENCFF654HDK/@@download/ENCFF654HDK.bed.gz hg19 released antibody characterized with exemption ENCFF105WGB bigBed narrowPeak conservative idr thresholded peaks ENCSR786OQY ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB5-human ENCAB301QZF DNA False 2017-07-28 ENCODE 1, 2 ENCFF654HDK 173023 ENCODE Processing Pipeline 0b0f4254ea3202fe8004eb5589d2288a https://www.encodeproject.org/files/ENCFF105WGB/@@download/ENCFF105WGB.bigBed hg19 released antibody characterized with exemption ENCFF539AFY bigBed narrowPeak optimal idr thresholded peaks ENCSR786OQY ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB5-human ENCAB301QZF DNA False 2017-07-28 ENCODE 1, 2 ENCFF359QCN 229284 ENCODE Processing Pipeline 9166841a969cee8ec38ee0b88761f780 https://www.encodeproject.org/files/ENCFF539AFY/@@download/ENCFF539AFY.bigBed hg19 released antibody characterized with exemption ENCFF359QCN bed narrowPeak optimal idr thresholded peaks ENCSR786OQY ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB5-human ENCAB301QZF DNA False 2017-07-28 ENCODE 1, 2 ENCFF001TDO, ENCFF477OXP, ENCFF813QIG, ENCFF901ECC 93421 ENCODE Processing Pipeline 7d36f0239138fa8ed42599cdb4431be9 https://www.encodeproject.org/files/ENCFF359QCN/@@download/ENCFF359QCN.bed.gz hg19 released antibody characterized with exemption ENCFF934QDZ bam unfiltered alignments ENCSR786OQY ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB5-human ENCAB301QZF DNA False 2017-07-28 ENCODE 2 100 ENCFF643CGH, ENCFF730YIK, ENCFF861REO 4635618779 ENCODE Processing Pipeline 1248f2a030389594e29525023e2d2e73 https://www.encodeproject.org/files/ENCFF934QDZ/@@download/ENCFF934QDZ.bam GRCh38 released antibody characterized with exemption ENCFF248KAG bam unfiltered alignments ENCSR786OQY ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB5-human ENCAB301QZF DNA False 2017-07-28 ENCODE 1 100 ENCFF543AIK, ENCFF643CGH, ENCFF865YPR 5873452277 ENCODE Processing Pipeline 214b21724057796c1492cfb9dabc751d https://www.encodeproject.org/files/ENCFF248KAG/@@download/ENCFF248KAG.bam GRCh38 released antibody characterized with exemption ENCFF329MCT bam alignments ENCSR786OQY ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB5-human ENCAB301QZF DNA False 2017-07-28 ENCODE 2 100 ENCFF643CGH, ENCFF730YIK, ENCFF861REO 4033853337 ENCODE Processing Pipeline a95dead3fb5a999719e2d352db197f83 https://www.encodeproject.org/files/ENCFF329MCT/@@download/ENCFF329MCT.bam GRCh38 released antibody characterized with exemption ENCFF872TUO bam alignments ENCSR786OQY ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB5-human ENCAB301QZF DNA False 2017-07-28 ENCODE 1 100 ENCFF543AIK, ENCFF643CGH, ENCFF865YPR 4464825655 ENCODE Processing Pipeline c17bc1635ed0701191c267a011d302fc https://www.encodeproject.org/files/ENCFF872TUO/@@download/ENCFF872TUO.bam GRCh38 released antibody characterized with exemption ENCFF211SZA bigWig signal p-value ENCSR786OQY ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB5-human ENCAB301QZF DNA False 2017-07-28 ENCODE 1 ENCFF872TUO, ENCFF910IKB 1065106526 ENCODE Processing Pipeline 91163111672ec23ff85987689bac875f https://www.encodeproject.org/files/ENCFF211SZA/@@download/ENCFF211SZA.bigWig GRCh38 released antibody characterized with exemption ENCFF102OPR bigWig signal p-value ENCSR786OQY ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB5-human ENCAB301QZF DNA False 2017-07-28 ENCODE 2 ENCFF227IZS, ENCFF329MCT 991169521 ENCODE Processing Pipeline fbdab7ce89b1d72e782938af8cb5fefc https://www.encodeproject.org/files/ENCFF102OPR/@@download/ENCFF102OPR.bigWig GRCh38 released antibody characterized with exemption ENCFF691ZSY bigWig signal p-value ENCSR786OQY ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB5-human ENCAB301QZF DNA False 2017-07-28 ENCODE 1, 2 ENCFF227IZS, ENCFF329MCT, ENCFF872TUO, ENCFF910IKB 1757976492 ENCODE Processing Pipeline c8eb24134b6fa82eb6a0fbb4be08a310 https://www.encodeproject.org/files/ENCFF691ZSY/@@download/ENCFF691ZSY.bigWig GRCh38 released antibody characterized with exemption ENCFF799OFC bigWig fold change over control ENCSR786OQY ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB5-human ENCAB301QZF DNA False 2017-07-28 ENCODE 1 ENCFF872TUO, ENCFF910IKB 1203622962 ENCODE Processing Pipeline 991dedd74405694ba896976a44fdf79e https://www.encodeproject.org/files/ENCFF799OFC/@@download/ENCFF799OFC.bigWig GRCh38 released antibody characterized with exemption ENCFF317AXA bigWig fold change over control ENCSR786OQY ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB5-human ENCAB301QZF DNA False 2017-07-28 ENCODE 2 ENCFF227IZS, ENCFF329MCT 1099242435 ENCODE Processing Pipeline e75199a15dc51a20c29009f3ea57c281 https://www.encodeproject.org/files/ENCFF317AXA/@@download/ENCFF317AXA.bigWig GRCh38 released antibody characterized with exemption ENCFF893QJX bigWig fold change over control ENCSR786OQY ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB5-human ENCAB301QZF DNA False 2017-07-28 ENCODE 1, 2 ENCFF227IZS, ENCFF329MCT, ENCFF872TUO, ENCFF910IKB 2061294245 ENCODE Processing Pipeline 8be213e61bb0ce76044af10a69e96193 https://www.encodeproject.org/files/ENCFF893QJX/@@download/ENCFF893QJX.bigWig GRCh38 released antibody characterized with exemption ENCFF142EFY bed narrowPeak peaks ENCSR786OQY ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB5-human ENCAB301QZF DNA False 2017-07-28 ENCODE 2 ENCFF227IZS, ENCFF329MCT 6560830 ENCODE Processing Pipeline ac6e89e4ff8fd9c139b9df30dfe89edc https://www.encodeproject.org/files/ENCFF142EFY/@@download/ENCFF142EFY.bed.gz GRCh38 released antibody characterized with exemption ENCFF411IUW bed narrowPeak peaks ENCSR786OQY ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB5-human ENCAB301QZF DNA False 2017-07-28 ENCODE 1 ENCFF872TUO, ENCFF910IKB 6323418 ENCODE Processing Pipeline cf68f881d8de37a9053d12a74694ae82 https://www.encodeproject.org/files/ENCFF411IUW/@@download/ENCFF411IUW.bed.gz GRCh38 released antibody characterized with exemption ENCFF935TEH bigBed narrowPeak peaks ENCSR786OQY ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB5-human ENCAB301QZF DNA False 2017-07-28 ENCODE 2 ENCFF142EFY 13242784 ENCODE Processing Pipeline 3154c0e3422d4bd7bcd3a8258e05e8d0 https://www.encodeproject.org/files/ENCFF935TEH/@@download/ENCFF935TEH.bigBed GRCh38 released antibody characterized with exemption ENCFF816QIM bed narrowPeak peaks ENCSR786OQY ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB5-human ENCAB301QZF DNA False 2017-07-28 ENCODE 1, 2 ENCFF227IZS, ENCFF329MCT, ENCFF872TUO, ENCFF910IKB 7144183 ENCODE Processing Pipeline cd14709fa040c1c160eeec94b83756d1 https://www.encodeproject.org/files/ENCFF816QIM/@@download/ENCFF816QIM.bed.gz GRCh38 released antibody characterized with exemption ENCFF858ZEL bigBed narrowPeak peaks ENCSR786OQY ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB5-human ENCAB301QZF DNA False 2017-07-28 ENCODE 1 ENCFF411IUW 11292455 ENCODE Processing Pipeline cf2227c25c68798144123e6f6105928d https://www.encodeproject.org/files/ENCFF858ZEL/@@download/ENCFF858ZEL.bigBed GRCh38 released antibody characterized with exemption ENCFF498TJW bed narrowPeak conservative idr thresholded peaks ENCSR786OQY ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB5-human ENCAB301QZF DNA False 2017-07-28 ENCODE 1, 2 ENCFF142EFY, ENCFF411IUW, ENCFF419RSJ, ENCFF816QIM 58180 ENCODE Processing Pipeline c9399bddbfba6ecc36bfbfe666d708f6 https://www.encodeproject.org/files/ENCFF498TJW/@@download/ENCFF498TJW.bed.gz GRCh38 released antibody characterized with exemption ENCFF466KJM bigBed narrowPeak peaks ENCSR786OQY ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB5-human ENCAB301QZF DNA False 2017-07-28 ENCODE 1, 2 ENCFF816QIM 13258207 ENCODE Processing Pipeline f3307f12c79057b83e69a618d3bde5fa https://www.encodeproject.org/files/ENCFF466KJM/@@download/ENCFF466KJM.bigBed GRCh38 released antibody characterized with exemption ENCFF145JVG bigBed narrowPeak optimal idr thresholded peaks ENCSR786OQY ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB5-human ENCAB301QZF DNA False 2017-07-28 ENCODE 1, 2 ENCFF813GMP 235530 ENCODE Processing Pipeline 25258f076e362be309636531a68fe36a https://www.encodeproject.org/files/ENCFF145JVG/@@download/ENCFF145JVG.bigBed GRCh38 released antibody characterized with exemption ENCFF544IUD bigBed narrowPeak conservative idr thresholded peaks ENCSR786OQY ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB5-human ENCAB301QZF DNA False 2017-07-28 ENCODE 1, 2 ENCFF498TJW 174717 ENCODE Processing Pipeline a2e4772f8b42a74104104dca3caabba9 https://www.encodeproject.org/files/ENCFF544IUD/@@download/ENCFF544IUD.bigBed GRCh38 released antibody characterized with exemption ENCFF813GMP bed narrowPeak optimal idr thresholded peaks ENCSR786OQY ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB5-human ENCAB301QZF DNA False 2017-07-28 ENCODE 1, 2 ENCFF142EFY, ENCFF411IUW, ENCFF419RSJ, ENCFF816QIM 95815 ENCODE Processing Pipeline 44c6a9971bc71fb862edde8496ee3c36 https://www.encodeproject.org/files/ENCFF813GMP/@@download/ENCFF813GMP.bed.gz GRCh38 released antibody characterized with exemption ENCFF392CDE bam unfiltered alignments ENCSR772EEN ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-RELA-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1 100 ENCFF148FMX, ENCFF528GYT, ENCFF807MUK 5960513929 ENCODE Processing Pipeline a469baa2571743354860355f47195dc9 https://www.encodeproject.org/files/ENCFF392CDE/@@download/ENCFF392CDE.bam hg19 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF182CER bam unfiltered alignments ENCSR772EEN ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-RELA-human ENCAB728YTO DNA False 2016-01-14 ENCODE 2 100 ENCFF074UIO, ENCFF186DEJ, ENCFF807MUK 5211210396 ENCODE Processing Pipeline 28a40bbf4337919886fe8afbb6e0114a https://www.encodeproject.org/files/ENCFF182CER/@@download/ENCFF182CER.bam hg19 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF186DEJ fastq reads ENCSR772EEN ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-RELA-human ENCAB728YTO DNA False 2016-01-14 ENCODE 2 1 100 paired-ended 2 ENCFF074UIO 2456614804 Michael Snyder, Stanford d36020dd1e934fa2a66a1ca4573cfff2 SRA:SRR5112062 https://www.encodeproject.org/files/ENCFF186DEJ/@@download/ENCFF186DEJ.fastq.gz Illumina HiSeq 2000 /files/ENCFF067HZB/ released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF148FMX fastq reads ENCSR772EEN ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-RELA-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1 1 100 paired-ended 1 ENCFF528GYT 2706721649 Michael Snyder, Stanford b4d68d98f5e512e7d209b5557a9f6967 SRA:SRR5112061 https://www.encodeproject.org/files/ENCFF148FMX/@@download/ENCFF148FMX.fastq.gz Illumina HiSeq 2000 /files/ENCFF795KJT/ released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF528GYT fastq reads ENCSR772EEN ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-RELA-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1 1 100 paired-ended 2 ENCFF148FMX 2751659952 Michael Snyder, Stanford 57479abd8ea021627ef380b7cded6dfe SRA:SRR5112061 https://www.encodeproject.org/files/ENCFF528GYT/@@download/ENCFF528GYT.fastq.gz Illumina HiSeq 2000 /files/ENCFF067HZB/ released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF074UIO fastq reads ENCSR772EEN ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-RELA-human ENCAB728YTO DNA False 2016-01-14 ENCODE 2 1 100 paired-ended 1 ENCFF186DEJ 2411275464 Michael Snyder, Stanford d31319386d0ef2b3b931d5cbdc897f2d SRA:SRR5112062 https://www.encodeproject.org/files/ENCFF074UIO/@@download/ENCFF074UIO.fastq.gz Illumina HiSeq 2000 /files/ENCFF795KJT/ released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF904PIO bam alignments ENCSR772EEN ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-RELA-human ENCAB728YTO DNA False 2016-01-14 ENCODE 2 100 ENCFF074UIO, ENCFF186DEJ, ENCFF807MUK 3945232879 ENCODE Processing Pipeline 90c9cae76e95e7f174199a52c762190e https://www.encodeproject.org/files/ENCFF904PIO/@@download/ENCFF904PIO.bam hg19 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF070QUN bam alignments ENCSR772EEN ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-RELA-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1 100 ENCFF148FMX, ENCFF528GYT, ENCFF807MUK 5067773423 ENCODE Processing Pipeline 7990830fdaf2860c49dbc0b8c2c30174 https://www.encodeproject.org/files/ENCFF070QUN/@@download/ENCFF070QUN.bam hg19 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF528IKJ bigWig fold change over control ENCSR772EEN ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-RELA-human ENCAB728YTO DNA False 2016-01-14 ENCODE 2 ENCFF387AIX, ENCFF904PIO 999867453 ENCODE Processing Pipeline 30e4f36e5a9cecb1071a26a486201586 https://www.encodeproject.org/files/ENCFF528IKJ/@@download/ENCFF528IKJ.bigWig hg19 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF200CFU bigWig signal p-value ENCSR772EEN ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-RELA-human ENCAB728YTO DNA False 2016-01-14 ENCODE 2 ENCFF387AIX, ENCFF904PIO 1011415692 ENCODE Processing Pipeline a1bbdb73b99a67a31edaf9a25d7e45b0 https://www.encodeproject.org/files/ENCFF200CFU/@@download/ENCFF200CFU.bigWig hg19 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF608LFT bam unfiltered alignments ENCSR772EEN ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-RELA-human ENCAB728YTO DNA False 2016-01-14 ENCODE 2 100 ENCFF074UIO, ENCFF186DEJ, ENCFF643CGH 5219372431 ENCODE Processing Pipeline 71fcf219e09ebb466cfb6b3a2453a1d2 https://www.encodeproject.org/files/ENCFF608LFT/@@download/ENCFF608LFT.bam GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF180NUP bam unfiltered alignments ENCSR772EEN ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-RELA-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1 100 ENCFF148FMX, ENCFF528GYT, ENCFF643CGH 5971890499 ENCODE Processing Pipeline 55879f09cf852e4dd53450c9b8e2cd46 https://www.encodeproject.org/files/ENCFF180NUP/@@download/ENCFF180NUP.bam GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF158BYF bam alignments ENCSR772EEN ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-RELA-human ENCAB728YTO DNA False 2016-01-14 ENCODE 2 100 ENCFF074UIO, ENCFF186DEJ, ENCFF643CGH 3948178839 ENCODE Processing Pipeline dd4d0bb31b80a1986d4a13b937d3b606 https://www.encodeproject.org/files/ENCFF158BYF/@@download/ENCFF158BYF.bam GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF557QLG bam alignments ENCSR772EEN ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-RELA-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1 100 ENCFF148FMX, ENCFF528GYT, ENCFF643CGH 5071912433 ENCODE Processing Pipeline 8a972ad63360616fb4442e54df1ab17f https://www.encodeproject.org/files/ENCFF557QLG/@@download/ENCFF557QLG.bam GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF758ZFN bigWig signal p-value ENCSR772EEN ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-RELA-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1 ENCFF557QLG, ENCFF824YEY 1174859763 ENCODE Processing Pipeline 30c9c2715f6c421e52080434ee514124 https://www.encodeproject.org/files/ENCFF758ZFN/@@download/ENCFF758ZFN.bigWig GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF895BMN bigWig signal p-value ENCSR772EEN ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-RELA-human ENCAB728YTO DNA False 2016-01-14 ENCODE 2 ENCFF158BYF, ENCFF824YEY 815309089 ENCODE Processing Pipeline 5d62efd253b865e54d5197765d78742b https://www.encodeproject.org/files/ENCFF895BMN/@@download/ENCFF895BMN.bigWig GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF460WXB bigWig signal p-value ENCSR772EEN ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-RELA-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF158BYF, ENCFF557QLG, ENCFF824YEY 1132074331 ENCODE Processing Pipeline 518454df4eae1f3f1d62de34863de8a0 https://www.encodeproject.org/files/ENCFF460WXB/@@download/ENCFF460WXB.bigWig GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF901WHQ bigWig fold change over control ENCSR772EEN ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-RELA-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1 ENCFF557QLG, ENCFF824YEY 1167568955 ENCODE Processing Pipeline e56fc2f9ac8a73fbd42dfacbe86deb7e https://www.encodeproject.org/files/ENCFF901WHQ/@@download/ENCFF901WHQ.bigWig GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF588HYK bigWig fold change over control ENCSR772EEN ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-RELA-human ENCAB728YTO DNA False 2016-01-14 ENCODE 2 ENCFF158BYF, ENCFF824YEY 1003204147 ENCODE Processing Pipeline 0c89258876d3f1d87dc63ad63a297820 https://www.encodeproject.org/files/ENCFF588HYK/@@download/ENCFF588HYK.bigWig GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF591WOF bigWig fold change over control ENCSR772EEN ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-RELA-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF158BYF, ENCFF557QLG, ENCFF824YEY 1629249038 ENCODE Processing Pipeline 629a8d3782fc7db235b3099106862a2c https://www.encodeproject.org/files/ENCFF591WOF/@@download/ENCFF591WOF.bigWig GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF702DXT bed narrowPeak peaks ENCSR772EEN ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-RELA-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1 ENCFF557QLG, ENCFF824YEY 6648349 ENCODE Processing Pipeline 917cbd4b0f4338169a2c9cbb3d57ab32 https://www.encodeproject.org/files/ENCFF702DXT/@@download/ENCFF702DXT.bed.gz GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF344XGC bigBed narrowPeak peaks ENCSR772EEN ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-RELA-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1 ENCFF702DXT 13193467 ENCODE Processing Pipeline 4e8115cd77223fcd5a28dedbe0a9ec15 https://www.encodeproject.org/files/ENCFF344XGC/@@download/ENCFF344XGC.bigBed GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF444LCK bed narrowPeak peaks ENCSR772EEN ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-RELA-human ENCAB728YTO DNA False 2016-01-14 ENCODE 2 ENCFF158BYF, ENCFF824YEY 6317319 ENCODE Processing Pipeline 04d711d3a5462a05c9058e7f166a1387 https://www.encodeproject.org/files/ENCFF444LCK/@@download/ENCFF444LCK.bed.gz GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF041ONC bigBed narrowPeak peaks ENCSR772EEN ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-RELA-human ENCAB728YTO DNA False 2016-01-14 ENCODE 2 ENCFF444LCK 13244805 ENCODE Processing Pipeline c0d6d470936ff1a1b0317f254ecc57b0 https://www.encodeproject.org/files/ENCFF041ONC/@@download/ENCFF041ONC.bigBed GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF403RJK bigBed narrowPeak peaks ENCSR772EEN ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-RELA-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF950QEI 13190548 ENCODE Processing Pipeline 354a51e4a6c7e882a780c1fae470748b https://www.encodeproject.org/files/ENCFF403RJK/@@download/ENCFF403RJK.bigBed GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF840ZAM bed narrowPeak conservative idr thresholded peaks ENCSR772EEN ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-RELA-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF419RSJ, ENCFF444LCK, ENCFF702DXT, ENCFF950QEI 116854 ENCODE Processing Pipeline 26bef3e658884fa3c1a2245a0645a8c8 https://www.encodeproject.org/files/ENCFF840ZAM/@@download/ENCFF840ZAM.bed.gz GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF950QEI bed narrowPeak peaks ENCSR772EEN ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-RELA-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF158BYF, ENCFF557QLG, ENCFF824YEY 7156972 ENCODE Processing Pipeline e3752a36a4ba63ba0ee052e127370976 https://www.encodeproject.org/files/ENCFF950QEI/@@download/ENCFF950QEI.bed.gz GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF931SVP bed narrowPeak optimal idr thresholded peaks ENCSR772EEN ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-RELA-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF419RSJ, ENCFF444LCK, ENCFF702DXT, ENCFF950QEI 192620 ENCODE Processing Pipeline 5645ffd3c2406c5968e2bbe78f27c11a https://www.encodeproject.org/files/ENCFF931SVP/@@download/ENCFF931SVP.bed.gz GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF443PUI bigBed narrowPeak conservative idr thresholded peaks ENCSR772EEN ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-RELA-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF840ZAM 294894 ENCODE Processing Pipeline 8dd691c9d88638af1c9d8f70e7a2ae13 https://www.encodeproject.org/files/ENCFF443PUI/@@download/ENCFF443PUI.bigBed GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF079CJV bigBed narrowPeak optimal idr thresholded peaks ENCSR772EEN ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-RELA-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF931SVP 489692 ENCODE Processing Pipeline 5d34ee1e70b31027ad549fec2c171824 https://www.encodeproject.org/files/ENCFF079CJV/@@download/ENCFF079CJV.bigBed GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF081GRD bigBed narrowPeak peaks ENCSR772EEN ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-RELA-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF401ROZ 13163324 ENCODE Processing Pipeline 31e521db7ab16068f99f391c5b48fda0 https://www.encodeproject.org/files/ENCFF081GRD/@@download/ENCFF081GRD.bigBed hg19 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF422YUB bigWig signal p-value ENCSR772EEN ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-RELA-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1 ENCFF070QUN, ENCFF387AIX 1173051213 ENCODE Processing Pipeline 0adf25b77a8f8fd0e39cce0393c22807 https://www.encodeproject.org/files/ENCFF422YUB/@@download/ENCFF422YUB.bigWig hg19 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF904LWU bigWig fold change over control ENCSR772EEN ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-RELA-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1 ENCFF070QUN, ENCFF387AIX 1161650209 ENCODE Processing Pipeline 254ba8ad7284bb5f1dd6c32b3ca2b46c https://www.encodeproject.org/files/ENCFF904LWU/@@download/ENCFF904LWU.bigWig hg19 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF145XQW bigBed narrowPeak optimal idr thresholded peaks ENCSR772EEN ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-RELA-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF580QGA 490521 ENCODE Processing Pipeline 53fc1958b5a16bd97950a25e29de3cad https://www.encodeproject.org/files/ENCFF145XQW/@@download/ENCFF145XQW.bigBed hg19 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF993MOQ bed narrowPeak peaks ENCSR772EEN ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-RELA-human ENCAB728YTO DNA False 2016-01-14 ENCODE 2 ENCFF387AIX, ENCFF904PIO 6311225 ENCODE Processing Pipeline 11f6ed6c2dc07141fabb2e9e59bf1606 https://www.encodeproject.org/files/ENCFF993MOQ/@@download/ENCFF993MOQ.bed.gz hg19 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF401ROZ bed narrowPeak peaks ENCSR772EEN ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-RELA-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF070QUN, ENCFF387AIX, ENCFF904PIO 7156529 ENCODE Processing Pipeline 74c2adb3a26e22eadbffdd10641b898a https://www.encodeproject.org/files/ENCFF401ROZ/@@download/ENCFF401ROZ.bed.gz hg19 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF998POF bigBed narrowPeak peaks ENCSR772EEN ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-RELA-human ENCAB728YTO DNA False 2016-01-14 ENCODE 2 ENCFF993MOQ 13226057 ENCODE Processing Pipeline 26b193484d0a36eb3d8167769ab5042c https://www.encodeproject.org/files/ENCFF998POF/@@download/ENCFF998POF.bigBed hg19 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF939ETO bed narrowPeak conservative idr thresholded peaks ENCSR772EEN ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-RELA-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF001TDO, ENCFF347CVK, ENCFF401ROZ, ENCFF993MOQ 118707 ENCODE Processing Pipeline 482a64ac5276f1a7babed1320153ec49 https://www.encodeproject.org/files/ENCFF939ETO/@@download/ENCFF939ETO.bed.gz hg19 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF580QGA bed narrowPeak optimal idr thresholded peaks ENCSR772EEN ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-RELA-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF001TDO, ENCFF347CVK, ENCFF401ROZ, ENCFF993MOQ 195207 ENCODE Processing Pipeline e5b33520cb44052d0d417f7ef5d0e38a https://www.encodeproject.org/files/ENCFF580QGA/@@download/ENCFF580QGA.bed.gz hg19 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF106AQL bigWig signal p-value ENCSR772EEN ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-RELA-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF070QUN, ENCFF387AIX, ENCFF904PIO 1153499286 ENCODE Processing Pipeline 44ea21d58dc3aa3062c246ad2f0f8f22 https://www.encodeproject.org/files/ENCFF106AQL/@@download/ENCFF106AQL.bigWig hg19 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF229BST bigWig fold change over control ENCSR772EEN ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-RELA-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF070QUN, ENCFF387AIX, ENCFF904PIO 1653640430 ENCODE Processing Pipeline 8b84c7c2c6f95be5e7be227666220231 https://www.encodeproject.org/files/ENCFF229BST/@@download/ENCFF229BST.bigWig hg19 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF347CVK bed narrowPeak peaks ENCSR772EEN ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-RELA-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1 ENCFF070QUN, ENCFF387AIX 6644140 ENCODE Processing Pipeline 1973f2cfc89d73a80ac9d8fb35c64493 https://www.encodeproject.org/files/ENCFF347CVK/@@download/ENCFF347CVK.bed.gz hg19 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF923TGJ bigBed narrowPeak peaks ENCSR772EEN ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-RELA-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1 ENCFF347CVK 13176486 ENCODE Processing Pipeline 50695df62708ef9bab1de32a783bede7 https://www.encodeproject.org/files/ENCFF923TGJ/@@download/ENCFF923TGJ.bigBed hg19 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF536FXJ bigBed narrowPeak conservative idr thresholded peaks ENCSR772EEN ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-RELA-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF939ETO 342240 ENCODE Processing Pipeline 50ba74e3a155c2af9c32c2a4d073dbeb https://www.encodeproject.org/files/ENCFF536FXJ/@@download/ENCFF536FXJ.bigBed hg19 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF800PQN bam unfiltered alignments ENCSR986CDX ChIP-seq EFO:0002067 K562 cell line Homo sapiens NEUROD1-human ENCAB000BDX DNA False 2014-07-07 ENCODE 2 36 ENCFF002EEM, ENCFF807MUK 602504579 ENCODE Processing Pipeline f347e4eae20696f9163cbd90b753ca74 https://www.encodeproject.org/files/ENCFF800PQN/@@download/ENCFF800PQN.bam hg19 released borderline replicate concordance, low read depth, low read length experiment not submitted to GEO partially characterized antibody ENCFF375DUO bam unfiltered alignments ENCSR986CDX ChIP-seq EFO:0002067 K562 cell line Homo sapiens NEUROD1-human ENCAB000BDX DNA False 2014-07-07 ENCODE 1 36 ENCFF002EEO, ENCFF807MUK 1079547321 ENCODE Processing Pipeline 826298254952966f1e5686dd4554a7a8 https://www.encodeproject.org/files/ENCFF375DUO/@@download/ENCFF375DUO.bam hg19 released borderline replicate concordance, low read depth, low read length experiment not submitted to GEO partially characterized antibody ENCFF002EEM fastq reads ENCSR986CDX ChIP-seq EFO:0002067 K562 cell line Homo sapiens NEUROD1-human ENCAB000BDX DNA False 2014-07-07 ENCODE 2 1 36 single-ended 393473613 Michael Snyder, Stanford d4e7563e50b70b442af81e549cf52cf4 https://www.encodeproject.org/files/ENCFF002EEM/@@download/ENCFF002EEM.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF002ECS/ released borderline replicate concordance, low read depth, low read length experiment not submitted to GEO partially characterized antibody ENCFF002EEO fastq reads ENCSR986CDX ChIP-seq EFO:0002067 K562 cell line Homo sapiens NEUROD1-human ENCAB000BDX DNA False 2014-07-07 ENCODE 1 1 36 single-ended 745346433 Michael Snyder, Stanford bbd1ce69eedb4ef9f90caa8d12008fe2 https://www.encodeproject.org/files/ENCFF002EEO/@@download/ENCFF002EEO.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF002ECW/ released borderline replicate concordance, low read depth, low read length experiment not submitted to GEO partially characterized antibody ENCFF325ZZV bam alignments ENCSR986CDX ChIP-seq EFO:0002067 K562 cell line Homo sapiens NEUROD1-human ENCAB000BDX DNA False 2014-07-07 ENCODE 1 36 ENCFF002EEO, ENCFF807MUK 758123969 ENCODE Processing Pipeline 66c51935d94256da68254bb4526482d0 https://www.encodeproject.org/files/ENCFF325ZZV/@@download/ENCFF325ZZV.bam hg19 released borderline replicate concordance, low read depth, low read length experiment not submitted to GEO partially characterized antibody ENCFF637BQA bam alignments ENCSR986CDX ChIP-seq EFO:0002067 K562 cell line Homo sapiens NEUROD1-human ENCAB000BDX DNA False 2014-07-07 ENCODE 2 36 ENCFF002EEM, ENCFF807MUK 426428817 ENCODE Processing Pipeline b2f5219555d1abbea519e01bfccfc87c https://www.encodeproject.org/files/ENCFF637BQA/@@download/ENCFF637BQA.bam hg19 released borderline replicate concordance, low read depth, low read length experiment not submitted to GEO partially characterized antibody ENCFF939VJC bigWig signal p-value ENCSR986CDX ChIP-seq EFO:0002067 K562 cell line Homo sapiens NEUROD1-human ENCAB000BDX DNA False 2014-07-07 ENCODE 2 ENCFF637BQA, ENCFF879OQC 419708932 ENCODE Processing Pipeline 75ff92b5e560e59a4b25c969e0be4596 https://www.encodeproject.org/files/ENCFF939VJC/@@download/ENCFF939VJC.bigWig hg19 released borderline replicate concordance, low read depth, low read length experiment not submitted to GEO partially characterized antibody ENCFF462EED bigWig signal p-value ENCSR986CDX ChIP-seq EFO:0002067 K562 cell line Homo sapiens NEUROD1-human ENCAB000BDX DNA False 2014-07-07 ENCODE 1 ENCFF325ZZV, ENCFF335IPE 459659947 ENCODE Processing Pipeline a39eae6d82df4630d89346476eef149d https://www.encodeproject.org/files/ENCFF462EED/@@download/ENCFF462EED.bigWig hg19 released borderline replicate concordance, low read depth, low read length experiment not submitted to GEO partially characterized antibody ENCFF891QLR bigWig signal p-value ENCSR986CDX ChIP-seq EFO:0002067 K562 cell line Homo sapiens NEUROD1-human ENCAB000BDX DNA False 2014-07-07 ENCODE 1, 2 ENCFF325ZZV, ENCFF335IPE, ENCFF637BQA, ENCFF879OQC 903080969 ENCODE Processing Pipeline 3f08984e78efbe8f769478882b45e952 https://www.encodeproject.org/files/ENCFF891QLR/@@download/ENCFF891QLR.bigWig hg19 released borderline replicate concordance, low read depth, low read length experiment not submitted to GEO partially characterized antibody ENCFF398ERH bigWig fold change over control ENCSR986CDX ChIP-seq EFO:0002067 K562 cell line Homo sapiens NEUROD1-human ENCAB000BDX DNA False 2014-07-07 ENCODE 1 ENCFF325ZZV, ENCFF335IPE 402573108 ENCODE Processing Pipeline 64e9b2af0e03ed8d0ce9a0a966e83ca1 https://www.encodeproject.org/files/ENCFF398ERH/@@download/ENCFF398ERH.bigWig hg19 released borderline replicate concordance, low read depth, low read length experiment not submitted to GEO partially characterized antibody ENCFF016RMV bigWig fold change over control ENCSR986CDX ChIP-seq EFO:0002067 K562 cell line Homo sapiens NEUROD1-human ENCAB000BDX DNA False 2014-07-07 ENCODE 2 ENCFF637BQA, ENCFF879OQC 267087160 ENCODE Processing Pipeline 19250b48304bb38e5c834cda18041955 https://www.encodeproject.org/files/ENCFF016RMV/@@download/ENCFF016RMV.bigWig hg19 released borderline replicate concordance, low read depth, low read length experiment not submitted to GEO partially characterized antibody ENCFF733OEF bigWig fold change over control ENCSR986CDX ChIP-seq EFO:0002067 K562 cell line Homo sapiens NEUROD1-human ENCAB000BDX DNA False 2014-07-07 ENCODE 1, 2 ENCFF325ZZV, ENCFF335IPE, ENCFF637BQA, ENCFF879OQC 785419838 ENCODE Processing Pipeline 82c9fb050ea69edc24cb9f43e44a9718 https://www.encodeproject.org/files/ENCFF733OEF/@@download/ENCFF733OEF.bigWig hg19 released borderline replicate concordance, low read depth, low read length experiment not submitted to GEO partially characterized antibody ENCFF391TOS bam alignments ENCSR986CDX ChIP-seq EFO:0002067 K562 cell line Homo sapiens NEUROD1-human ENCAB000BDX DNA False 2014-07-07 ENCODE 2 36 ENCFF002EEM, ENCFF643CGH 426035349 ENCODE Processing Pipeline b02d2f7407e7b79719d291bffb4aebe1 https://www.encodeproject.org/files/ENCFF391TOS/@@download/ENCFF391TOS.bam GRCh38 released borderline replicate concordance, low read depth, low read length experiment not submitted to GEO partially characterized antibody ENCFF454SYR bam unfiltered alignments ENCSR986CDX ChIP-seq EFO:0002067 K562 cell line Homo sapiens NEUROD1-human ENCAB000BDX DNA False 2014-07-07 ENCODE 1 36 ENCFF002EEO, ENCFF643CGH 1083671571 ENCODE Processing Pipeline 91a7a10394f135f0ebff6a1110c46e58 https://www.encodeproject.org/files/ENCFF454SYR/@@download/ENCFF454SYR.bam GRCh38 released borderline replicate concordance, low read depth, low read length experiment not submitted to GEO partially characterized antibody ENCFF280GUI bam unfiltered alignments ENCSR986CDX ChIP-seq EFO:0002067 K562 cell line Homo sapiens NEUROD1-human ENCAB000BDX DNA False 2014-07-07 ENCODE 2 36 ENCFF002EEM, ENCFF643CGH 605100577 ENCODE Processing Pipeline 7c341b583cd504c88b4e23b16e21c394 https://www.encodeproject.org/files/ENCFF280GUI/@@download/ENCFF280GUI.bam GRCh38 released borderline replicate concordance, low read depth, low read length experiment not submitted to GEO partially characterized antibody ENCFF104FDK bam alignments ENCSR986CDX ChIP-seq EFO:0002067 K562 cell line Homo sapiens NEUROD1-human ENCAB000BDX DNA False 2014-07-07 ENCODE 1 36 ENCFF002EEO, ENCFF643CGH 757518102 ENCODE Processing Pipeline a5d0d6bb26db63941a0186f1728c9676 https://www.encodeproject.org/files/ENCFF104FDK/@@download/ENCFF104FDK.bam GRCh38 released borderline replicate concordance, low read depth, low read length experiment not submitted to GEO partially characterized antibody ENCFF186KKE bigWig signal p-value ENCSR986CDX ChIP-seq EFO:0002067 K562 cell line Homo sapiens NEUROD1-human ENCAB000BDX DNA False 2014-07-07 ENCODE 1 ENCFF104FDK, ENCFF156FED 580930017 ENCODE Processing Pipeline 9c40d1ee530fd09bca61251a449a4915 https://www.encodeproject.org/files/ENCFF186KKE/@@download/ENCFF186KKE.bigWig GRCh38 released borderline replicate concordance, low read depth, low read length experiment not submitted to GEO partially characterized antibody ENCFF227HLE bigWig signal p-value ENCSR986CDX ChIP-seq EFO:0002067 K562 cell line Homo sapiens NEUROD1-human ENCAB000BDX DNA False 2014-07-07 ENCODE 2 ENCFF391TOS, ENCFF577FNG 418423814 ENCODE Processing Pipeline 4461fab5817fdaeb8db62de9dcd4ef12 https://www.encodeproject.org/files/ENCFF227HLE/@@download/ENCFF227HLE.bigWig GRCh38 released borderline replicate concordance, low read depth, low read length experiment not submitted to GEO partially characterized antibody ENCFF810HXM bigWig signal p-value ENCSR986CDX ChIP-seq EFO:0002067 K562 cell line Homo sapiens NEUROD1-human ENCAB000BDX DNA False 2014-07-07 ENCODE 1, 2 ENCFF104FDK, ENCFF156FED, ENCFF391TOS, ENCFF577FNG 876651189 ENCODE Processing Pipeline 453550ac5e19cb477528c639085601b8 https://www.encodeproject.org/files/ENCFF810HXM/@@download/ENCFF810HXM.bigWig GRCh38 released borderline replicate concordance, low read depth, low read length experiment not submitted to GEO partially characterized antibody ENCFF603CNR bigWig fold change over control ENCSR986CDX ChIP-seq EFO:0002067 K562 cell line Homo sapiens NEUROD1-human ENCAB000BDX DNA False 2014-07-07 ENCODE 2 ENCFF391TOS, ENCFF577FNG 268479178 ENCODE Processing Pipeline be0aaccdb79cd7507e5a9c29b9c47e2d https://www.encodeproject.org/files/ENCFF603CNR/@@download/ENCFF603CNR.bigWig GRCh38 released borderline replicate concordance, low read depth, low read length experiment not submitted to GEO partially characterized antibody ENCFF818CWL bigWig fold change over control ENCSR986CDX ChIP-seq EFO:0002067 K562 cell line Homo sapiens NEUROD1-human ENCAB000BDX DNA False 2014-07-07 ENCODE 1 ENCFF104FDK, ENCFF156FED 393593914 ENCODE Processing Pipeline 2fd85fde8db9e31c8cca98929c369443 https://www.encodeproject.org/files/ENCFF818CWL/@@download/ENCFF818CWL.bigWig GRCh38 released borderline replicate concordance, low read depth, low read length experiment not submitted to GEO partially characterized antibody ENCFF189CHX bigWig fold change over control ENCSR986CDX ChIP-seq EFO:0002067 K562 cell line Homo sapiens NEUROD1-human ENCAB000BDX DNA False 2014-07-07 ENCODE 1, 2 ENCFF104FDK, ENCFF156FED, ENCFF391TOS, ENCFF577FNG 762689962 ENCODE Processing Pipeline b2471afe47610f0d81e6f8512f530cb8 https://www.encodeproject.org/files/ENCFF189CHX/@@download/ENCFF189CHX.bigWig GRCh38 released borderline replicate concordance, low read depth, low read length experiment not submitted to GEO partially characterized antibody ENCFF011UME bed narrowPeak peaks ENCSR986CDX ChIP-seq EFO:0002067 K562 cell line Homo sapiens NEUROD1-human ENCAB000BDX DNA False 2014-07-07 ENCODE 1 ENCFF104FDK, ENCFF156FED 5339246 ENCODE Processing Pipeline 76d46cedbade493fc17087d7e3f3af3f https://www.encodeproject.org/files/ENCFF011UME/@@download/ENCFF011UME.bed.gz GRCh38 released borderline replicate concordance, low read depth, low read length experiment not submitted to GEO partially characterized antibody ENCFF256FBL bed narrowPeak peaks ENCSR986CDX ChIP-seq EFO:0002067 K562 cell line Homo sapiens NEUROD1-human ENCAB000BDX DNA False 2014-07-07 ENCODE 1, 2 ENCFF104FDK, ENCFF156FED, ENCFF391TOS, ENCFF577FNG 6315389 ENCODE Processing Pipeline ff1ce6f46dd7069367f9630eaf9dbd48 https://www.encodeproject.org/files/ENCFF256FBL/@@download/ENCFF256FBL.bed.gz GRCh38 released borderline replicate concordance, low read depth, low read length experiment not submitted to GEO partially characterized antibody ENCFF145FAT bigBed narrowPeak peaks ENCSR986CDX ChIP-seq EFO:0002067 K562 cell line Homo sapiens NEUROD1-human ENCAB000BDX DNA False 2014-07-07 ENCODE 1 ENCFF011UME 13007370 ENCODE Processing Pipeline 21ccfdf9178eb8daa1bde21325604299 https://www.encodeproject.org/files/ENCFF145FAT/@@download/ENCFF145FAT.bigBed GRCh38 released borderline replicate concordance, low read depth, low read length experiment not submitted to GEO partially characterized antibody ENCFF684AAF bed narrowPeak peaks ENCSR986CDX ChIP-seq EFO:0002067 K562 cell line Homo sapiens NEUROD1-human ENCAB000BDX DNA False 2014-07-07 ENCODE 2 ENCFF391TOS, ENCFF577FNG 4772185 ENCODE Processing Pipeline 955ab1162757e3d9a347994a5eaa169d https://www.encodeproject.org/files/ENCFF684AAF/@@download/ENCFF684AAF.bed.gz GRCh38 released borderline replicate concordance, low read depth, low read length experiment not submitted to GEO partially characterized antibody ENCFF103XPI bigBed narrowPeak peaks ENCSR986CDX ChIP-seq EFO:0002067 K562 cell line Homo sapiens NEUROD1-human ENCAB000BDX DNA False 2014-07-07 ENCODE 2 ENCFF684AAF 10704763 ENCODE Processing Pipeline 9af6c31d8f478191058446a23bdbc6d4 https://www.encodeproject.org/files/ENCFF103XPI/@@download/ENCFF103XPI.bigBed GRCh38 released borderline replicate concordance, low read depth, low read length experiment not submitted to GEO partially characterized antibody ENCFF240HNQ bigBed narrowPeak peaks ENCSR986CDX ChIP-seq EFO:0002067 K562 cell line Homo sapiens NEUROD1-human ENCAB000BDX DNA False 2014-07-07 ENCODE 1, 2 ENCFF256FBL 13306815 ENCODE Processing Pipeline 0558ae9bebd81b56e369ef982944b6f6 https://www.encodeproject.org/files/ENCFF240HNQ/@@download/ENCFF240HNQ.bigBed GRCh38 released borderline replicate concordance, low read depth, low read length experiment not submitted to GEO partially characterized antibody ENCFF755APC bed narrowPeak optimal idr thresholded peaks ENCSR986CDX ChIP-seq EFO:0002067 K562 cell line Homo sapiens NEUROD1-human ENCAB000BDX DNA False 2014-07-07 ENCODE 1, 2 ENCFF011UME, ENCFF256FBL, ENCFF419RSJ, ENCFF684AAF 240083 ENCODE Processing Pipeline c2e8f3a974b9271bb9c3c4c369464a5f https://www.encodeproject.org/files/ENCFF755APC/@@download/ENCFF755APC.bed.gz GRCh38 released borderline replicate concordance, low read depth, low read length experiment not submitted to GEO partially characterized antibody ENCFF115GNB bigBed narrowPeak conservative idr thresholded peaks ENCSR986CDX ChIP-seq EFO:0002067 K562 cell line Homo sapiens NEUROD1-human ENCAB000BDX DNA False 2014-07-07 ENCODE 1, 2 ENCFF296WNS 383544 ENCODE Processing Pipeline 090e0642bced1b3dd7871da50abe994b https://www.encodeproject.org/files/ENCFF115GNB/@@download/ENCFF115GNB.bigBed GRCh38 released borderline replicate concordance, low read depth, low read length experiment not submitted to GEO partially characterized antibody ENCFF296WNS bed narrowPeak conservative idr thresholded peaks ENCSR986CDX ChIP-seq EFO:0002067 K562 cell line Homo sapiens NEUROD1-human ENCAB000BDX DNA False 2014-07-07 ENCODE 1, 2 ENCFF011UME, ENCFF256FBL, ENCFF419RSJ, ENCFF684AAF 179091 ENCODE Processing Pipeline b04fc4e6d80b4fd88e036f3e3c507805 https://www.encodeproject.org/files/ENCFF296WNS/@@download/ENCFF296WNS.bed.gz GRCh38 released borderline replicate concordance, low read depth, low read length experiment not submitted to GEO partially characterized antibody ENCFF734QWM bigBed narrowPeak optimal idr thresholded peaks ENCSR986CDX ChIP-seq EFO:0002067 K562 cell line Homo sapiens NEUROD1-human ENCAB000BDX DNA False 2014-07-07 ENCODE 1, 2 ENCFF755APC 468996 ENCODE Processing Pipeline 2a43b5c2df70fe23c3e470aceafb9d68 https://www.encodeproject.org/files/ENCFF734QWM/@@download/ENCFF734QWM.bigBed GRCh38 released borderline replicate concordance, low read depth, low read length experiment not submitted to GEO partially characterized antibody ENCFF872LIG bigBed narrowPeak conservative idr thresholded peaks ENCSR986CDX ChIP-seq EFO:0002067 K562 cell line Homo sapiens NEUROD1-human ENCAB000BDX DNA False 2014-07-07 ENCODE 1, 2 ENCFF852XSD 390190 ENCODE Processing Pipeline d57c67f75db56e2b4b4e9485d932168d https://www.encodeproject.org/files/ENCFF872LIG/@@download/ENCFF872LIG.bigBed hg19 released borderline replicate concordance, low read depth, low read length experiment not submitted to GEO partially characterized antibody ENCFF852XSD bed narrowPeak conservative idr thresholded peaks ENCSR986CDX ChIP-seq EFO:0002067 K562 cell line Homo sapiens NEUROD1-human ENCAB000BDX DNA False 2014-07-07 ENCODE 1, 2 ENCFF001TDO, ENCFF314SAN, ENCFF334IIE, ENCFF973JKQ 184332 ENCODE Processing Pipeline b21abaa25f0e180cdc091b710e026b1d https://www.encodeproject.org/files/ENCFF852XSD/@@download/ENCFF852XSD.bed.gz hg19 released borderline replicate concordance, low read depth, low read length experiment not submitted to GEO partially characterized antibody ENCFF581YKY bed narrowPeak optimal idr thresholded peaks ENCSR986CDX ChIP-seq EFO:0002067 K562 cell line Homo sapiens NEUROD1-human ENCAB000BDX DNA False 2014-07-07 ENCODE 1, 2 ENCFF001TDO, ENCFF314SAN, ENCFF334IIE, ENCFF973JKQ 252531 ENCODE Processing Pipeline de1c71d16bed9d96dcff38981ba5dd30 https://www.encodeproject.org/files/ENCFF581YKY/@@download/ENCFF581YKY.bed.gz hg19 released borderline replicate concordance, low read depth, low read length experiment not submitted to GEO partially characterized antibody ENCFF823QCH bigBed narrowPeak optimal idr thresholded peaks ENCSR986CDX ChIP-seq EFO:0002067 K562 cell line Homo sapiens NEUROD1-human ENCAB000BDX DNA False 2014-07-07 ENCODE 1, 2 ENCFF581YKY 484540 ENCODE Processing Pipeline 30234b80837e3dcfa503d28874a67173 https://www.encodeproject.org/files/ENCFF823QCH/@@download/ENCFF823QCH.bigBed hg19 released borderline replicate concordance, low read depth, low read length experiment not submitted to GEO partially characterized antibody ENCFF079XRX bigBed narrowPeak peaks ENCSR986CDX ChIP-seq EFO:0002067 K562 cell line Homo sapiens NEUROD1-human ENCAB000BDX DNA False 2014-07-07 ENCODE 1 ENCFF314SAN 13021079 ENCODE Processing Pipeline 0e74b7c7cf2e074799723f6f8f814aa6 https://www.encodeproject.org/files/ENCFF079XRX/@@download/ENCFF079XRX.bigBed hg19 released borderline replicate concordance, low read depth, low read length experiment not submitted to GEO partially characterized antibody ENCFF915ZJN bigBed narrowPeak peaks ENCSR986CDX ChIP-seq EFO:0002067 K562 cell line Homo sapiens NEUROD1-human ENCAB000BDX DNA False 2014-07-07 ENCODE 1, 2 ENCFF973JKQ 13320460 ENCODE Processing Pipeline 21ad89854883da9e0765c79245d563cb https://www.encodeproject.org/files/ENCFF915ZJN/@@download/ENCFF915ZJN.bigBed hg19 released borderline replicate concordance, low read depth, low read length experiment not submitted to GEO partially characterized antibody ENCFF334IIE bed narrowPeak peaks ENCSR986CDX ChIP-seq EFO:0002067 K562 cell line Homo sapiens NEUROD1-human ENCAB000BDX DNA False 2014-07-07 ENCODE 2 ENCFF637BQA, ENCFF879OQC 4718507 ENCODE Processing Pipeline 15b4c3e9c786715520f4db3583147756 https://www.encodeproject.org/files/ENCFF334IIE/@@download/ENCFF334IIE.bed.gz hg19 released borderline replicate concordance, low read depth, low read length experiment not submitted to GEO partially characterized antibody ENCFF973JKQ bed narrowPeak peaks ENCSR986CDX ChIP-seq EFO:0002067 K562 cell line Homo sapiens NEUROD1-human ENCAB000BDX DNA False 2014-07-07 ENCODE 1, 2 ENCFF325ZZV, ENCFF335IPE, ENCFF637BQA, ENCFF879OQC 6329329 ENCODE Processing Pipeline a968bd6eaed6ee269cd59eec2944eff7 https://www.encodeproject.org/files/ENCFF973JKQ/@@download/ENCFF973JKQ.bed.gz hg19 released borderline replicate concordance, low read depth, low read length experiment not submitted to GEO partially characterized antibody ENCFF122FAI bigBed narrowPeak peaks ENCSR986CDX ChIP-seq EFO:0002067 K562 cell line Homo sapiens NEUROD1-human ENCAB000BDX DNA False 2014-07-07 ENCODE 2 ENCFF334IIE 10641922 ENCODE Processing Pipeline 226d260993948b2831e637e049c3733e https://www.encodeproject.org/files/ENCFF122FAI/@@download/ENCFF122FAI.bigBed hg19 released borderline replicate concordance, low read depth, low read length experiment not submitted to GEO partially characterized antibody ENCFF314SAN bed narrowPeak peaks ENCSR986CDX ChIP-seq EFO:0002067 K562 cell line Homo sapiens NEUROD1-human ENCAB000BDX DNA False 2014-07-07 ENCODE 1 ENCFF325ZZV, ENCFF335IPE 5353439 ENCODE Processing Pipeline a666fc7ec79b9e3fd8021d4423ecd24c https://www.encodeproject.org/files/ENCFF314SAN/@@download/ENCFF314SAN.bed.gz hg19 released borderline replicate concordance, low read depth, low read length experiment not submitted to GEO partially characterized antibody ENCFF000CCF bigBed broadPeak peaks ENCSR000AUC ChIP-seq EFO:0002067 K562 cell line Homo sapiens SUZ12-human ENCAB000ALK, ENCAB741YHG DNA see document see document False 2012-08-06 ENCODE 1 ENCFF001TAG 604776 Bradley Bernstein, Broad a0d71f441b576666e709f70a917cd460 https://www.encodeproject.org/files/ENCFF000CCF/@@download/ENCFF000CCF.bigBed hg19 archived mixed read lengths, inconsistent platforms, low read length missing raw data in replicate ENCFF000CCH bigWig signal ENCSR000AUC ChIP-seq EFO:0002067 K562 cell line Homo sapiens SUZ12-human ENCAB000ALK, ENCAB741YHG DNA see document see document False 2012-08-06 ENCODE 1 ENCFF000CCI 170393462 Bradley Bernstein, Broad c9b9ae4cf741771200eabed07ae314eb https://www.encodeproject.org/files/ENCFF000CCH/@@download/ENCFF000CCH.bigWig hg19 archived mixed read lengths, inconsistent platforms, low read length missing raw data in replicate ENCFF000CCI bam alignments ENCSR000AUC ChIP-seq EFO:0002067 K562 cell line Homo sapiens SUZ12-human ENCAB000ALK, ENCAB741YHG DNA see document see document False 2012-08-06 ENCODE 1 1 764448351 Bradley Bernstein, Broad cff14519b9a80e18c3a5e6feade2cc1d https://www.encodeproject.org/files/ENCFF000CCI/@@download/ENCFF000CCI.bam hg19 archived mixed read lengths, inconsistent platforms, low read length missing raw data in replicate, missing derived_from ENCFF000CCP fastq reads ENCSR000AUC ChIP-seq EFO:0002067 K562 cell line Homo sapiens SUZ12-human ENCAB000ALK, ENCAB741YHG DNA see document see document False 2012-08-06 ENCODE 1 1 36 single-ended 1086842838 Bradley Bernstein, Broad e0b31b6f487330383c29080b94b2d8b3 https://www.encodeproject.org/files/ENCFF000CCP/@@download/ENCFF000CCP.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000BWK/ released mixed read lengths, inconsistent platforms, low read length missing raw data in replicate ENCFF001TAG bed broadPeak peaks ENCSR000AUC ChIP-seq EFO:0002067 K562 cell line Homo sapiens SUZ12-human ENCAB000ALK, ENCAB741YHG DNA see document see document False 2012-08-06 ENCODE 1 ENCFF000CCI 312894 Bradley Bernstein, Broad d2e578c371285096edf82d2dc493df07 https://www.encodeproject.org/files/ENCFF001TAG/@@download/ENCFF001TAG.bed.gz hg19 archived mixed read lengths, inconsistent platforms, low read length missing raw data in replicate ENCFF509DMD fastq reads ENCSR000AUC ChIP-seq EFO:0002067 K562 cell line Homo sapiens SUZ12-human ENCAB000ALK, ENCAB741YHG DNA see document see document False 2012-08-06 ENCODE 3 1 30 single-ended 558980305 Bradley Bernstein, Broad 000b7ba9d0b023da18494f323dd839f6 https://www.encodeproject.org/files/ENCFF509DMD/@@download/ENCFF509DMD.fastq.gz Illumina HiSeq 2500 archived mixed read lengths, inconsistent platforms, low read length missing raw data in replicate missing controlled_by ENCFF890OZT fastq reads ENCSR000AUC ChIP-seq EFO:0002067 K562 cell line Homo sapiens SUZ12-human ENCAB000ALK, ENCAB741YHG DNA see document see document False 2012-08-06 ENCODE 2 1 76 single-ended 2150231435 Bradley Bernstein, Broad 0a58ac8eaff2cf17a535d5e579625597 https://www.encodeproject.org/files/ENCFF890OZT/@@download/ENCFF890OZT.fastq.gz Illumina HiSeq 2500 released mixed read lengths, inconsistent platforms, low read length missing raw data in replicate missing controlled_by ENCFF055CQR fastq reads ENCSR189VXS ChIP-seq EFO:0002067 K562 cell line Homo sapiens GTF2F1-human ENCAB320AVC DNA False 2018-01-30 ENCODE 1 1 100 paired-ended 2 ENCFF784TRG 2978057817 Michael Snyder, Stanford 574d762aeaff9e2a9a1ec4668292afcb https://www.encodeproject.org/files/ENCFF055CQR/@@download/ENCFF055CQR.fastq.gz Illumina HiSeq 2000 /files/ENCFF368UOC/ released experiment not submitted to GEO partially characterized antibody ENCFF784TRG fastq reads ENCSR189VXS ChIP-seq EFO:0002067 K562 cell line Homo sapiens GTF2F1-human ENCAB320AVC DNA False 2018-01-30 ENCODE 1 1 100 paired-ended 1 ENCFF055CQR 2944093851 Michael Snyder, Stanford 62f884d82f5ab03791d2b0bd24802864 https://www.encodeproject.org/files/ENCFF784TRG/@@download/ENCFF784TRG.fastq.gz Illumina HiSeq 2000 /files/ENCFF410PHD/ released experiment not submitted to GEO partially characterized antibody ENCFF909TZW fastq reads ENCSR189VXS ChIP-seq EFO:0002067 K562 cell line Homo sapiens GTF2F1-human ENCAB320AVC DNA False 2018-01-30 ENCODE 2 1 100 paired-ended 1 ENCFF999MLQ 2971509757 Michael Snyder, Stanford 9f990a70175dcc71a73d97f5b1890e6f https://www.encodeproject.org/files/ENCFF909TZW/@@download/ENCFF909TZW.fastq.gz Illumina HiSeq 2000 /files/ENCFF240DTE/ released experiment not submitted to GEO partially characterized antibody ENCFF999MLQ fastq reads ENCSR189VXS ChIP-seq EFO:0002067 K562 cell line Homo sapiens GTF2F1-human ENCAB320AVC DNA False 2018-01-30 ENCODE 2 1 100 paired-ended 2 ENCFF909TZW 3012860933 Michael Snyder, Stanford f862d7e1af13ac9c2783ccc8b0675dd2 https://www.encodeproject.org/files/ENCFF999MLQ/@@download/ENCFF999MLQ.fastq.gz Illumina HiSeq 2000 /files/ENCFF608MDV/ released experiment not submitted to GEO partially characterized antibody ENCFF910XGG bam unfiltered alignments ENCSR189VXS ChIP-seq EFO:0002067 K562 cell line Homo sapiens GTF2F1-human ENCAB320AVC DNA False 2018-01-30 ENCODE 2 100 ENCFF643CGH, ENCFF909TZW, ENCFF999MLQ 6508977235 ENCODE Processing Pipeline 044a244995fa14384dff8e8a2cbfbcf4 https://www.encodeproject.org/files/ENCFF910XGG/@@download/ENCFF910XGG.bam GRCh38 released experiment not submitted to GEO partially characterized antibody ENCFF998XCQ bam unfiltered alignments ENCSR189VXS ChIP-seq EFO:0002067 K562 cell line Homo sapiens GTF2F1-human ENCAB320AVC DNA False 2018-01-30 ENCODE 1 100 ENCFF055CQR, ENCFF643CGH, ENCFF784TRG 6429915873 ENCODE Processing Pipeline 80d6e9ad0f84ed2435031985614153f6 https://www.encodeproject.org/files/ENCFF998XCQ/@@download/ENCFF998XCQ.bam GRCh38 released experiment not submitted to GEO partially characterized antibody ENCFF156NBU bam unfiltered alignments ENCSR189VXS ChIP-seq EFO:0002067 K562 cell line Homo sapiens GTF2F1-human ENCAB320AVC DNA False 2018-01-30 ENCODE 1 100 ENCFF055CQR, ENCFF784TRG, ENCFF807MUK 6425008931 ENCODE Processing Pipeline eff6309fa69ac17fa8ba37cdf75927ef https://www.encodeproject.org/files/ENCFF156NBU/@@download/ENCFF156NBU.bam hg19 released experiment not submitted to GEO partially characterized antibody ENCFF982YOB bam unfiltered alignments ENCSR189VXS ChIP-seq EFO:0002067 K562 cell line Homo sapiens GTF2F1-human ENCAB320AVC DNA False 2018-01-30 ENCODE 2 100 ENCFF807MUK, ENCFF909TZW, ENCFF999MLQ 6503553522 ENCODE Processing Pipeline 33e757bc12c79d57cbf7042389487525 https://www.encodeproject.org/files/ENCFF982YOB/@@download/ENCFF982YOB.bam hg19 released experiment not submitted to GEO partially characterized antibody ENCFF842XJL bam alignments ENCSR189VXS ChIP-seq EFO:0002067 K562 cell line Homo sapiens GTF2F1-human ENCAB320AVC DNA False 2018-01-30 ENCODE 1 100 ENCFF055CQR, ENCFF784TRG, ENCFF807MUK 5130249113 ENCODE Processing Pipeline b316bf0075d4364a34280c6a5d2b108a https://www.encodeproject.org/files/ENCFF842XJL/@@download/ENCFF842XJL.bam hg19 released experiment not submitted to GEO partially characterized antibody ENCFF071ONN bam alignments ENCSR189VXS ChIP-seq EFO:0002067 K562 cell line Homo sapiens GTF2F1-human ENCAB320AVC DNA False 2018-01-30 ENCODE 2 100 ENCFF643CGH, ENCFF909TZW, ENCFF999MLQ 5263294015 ENCODE Processing Pipeline 02fa0ec802f1d94f28bee6cf6f905206 https://www.encodeproject.org/files/ENCFF071ONN/@@download/ENCFF071ONN.bam GRCh38 released experiment not submitted to GEO partially characterized antibody ENCFF502QVA bam alignments ENCSR189VXS ChIP-seq EFO:0002067 K562 cell line Homo sapiens GTF2F1-human ENCAB320AVC DNA False 2018-01-30 ENCODE 2 100 ENCFF807MUK, ENCFF909TZW, ENCFF999MLQ 5258568488 ENCODE Processing Pipeline 854ccb16c87ef1a9c87e8ecb23031739 https://www.encodeproject.org/files/ENCFF502QVA/@@download/ENCFF502QVA.bam hg19 released experiment not submitted to GEO partially characterized antibody ENCFF507AHN bam alignments ENCSR189VXS ChIP-seq EFO:0002067 K562 cell line Homo sapiens GTF2F1-human ENCAB320AVC DNA False 2018-01-30 ENCODE 1 100 ENCFF055CQR, ENCFF643CGH, ENCFF784TRG 5134646205 ENCODE Processing Pipeline e463badb4e374c797e5c53fc5d71a667 https://www.encodeproject.org/files/ENCFF507AHN/@@download/ENCFF507AHN.bam GRCh38 released experiment not submitted to GEO partially characterized antibody ENCFF998FIM bigWig signal p-value ENCSR189VXS ChIP-seq EFO:0002067 K562 cell line Homo sapiens GTF2F1-human ENCAB320AVC DNA False 2018-01-30 ENCODE 1 ENCFF507AHN, ENCFF720AUK, ENCFF796JTX 1431950604 ENCODE Processing Pipeline ffcdc746a108f8f468cd14d25f353fc5 https://www.encodeproject.org/files/ENCFF998FIM/@@download/ENCFF998FIM.bigWig GRCh38 released experiment not submitted to GEO partially characterized antibody ENCFF270QWU bigWig signal p-value ENCSR189VXS ChIP-seq EFO:0002067 K562 cell line Homo sapiens GTF2F1-human ENCAB320AVC DNA False 2018-01-30 ENCODE 1, 2 ENCFF071ONN, ENCFF507AHN, ENCFF720AUK, ENCFF796JTX 1944548153 ENCODE Processing Pipeline 37c2291930882ace910d949a4bc0b017 https://www.encodeproject.org/files/ENCFF270QWU/@@download/ENCFF270QWU.bigWig GRCh38 released experiment not submitted to GEO partially characterized antibody ENCFF273QPL bigBed narrowPeak peaks ENCSR189VXS ChIP-seq EFO:0002067 K562 cell line Homo sapiens GTF2F1-human ENCAB320AVC DNA False 2018-01-30 ENCODE 1 ENCFF866LFO 13326841 ENCODE Processing Pipeline 8ea4d9effb3e134850e9e5753fb37183 https://www.encodeproject.org/files/ENCFF273QPL/@@download/ENCFF273QPL.bigBed GRCh38 released experiment not submitted to GEO partially characterized antibody ENCFF636QED bigWig fold change over control ENCSR189VXS ChIP-seq EFO:0002067 K562 cell line Homo sapiens GTF2F1-human ENCAB320AVC DNA False 2018-01-30 ENCODE 1 ENCFF507AHN, ENCFF720AUK, ENCFF796JTX 1407397755 ENCODE Processing Pipeline 04f4f8c4b52db7569d87b4faa39ff91d https://www.encodeproject.org/files/ENCFF636QED/@@download/ENCFF636QED.bigWig GRCh38 released experiment not submitted to GEO partially characterized antibody ENCFF714ZYC bigWig signal p-value ENCSR189VXS ChIP-seq EFO:0002067 K562 cell line Homo sapiens GTF2F1-human ENCAB320AVC DNA False 2018-01-30 ENCODE 2 ENCFF071ONN, ENCFF720AUK, ENCFF796JTX 1436923368 ENCODE Processing Pipeline a2bfc3186b852b3283eeac10e51dac15 https://www.encodeproject.org/files/ENCFF714ZYC/@@download/ENCFF714ZYC.bigWig GRCh38 released experiment not submitted to GEO partially characterized antibody ENCFF338NRW bigWig fold change over control ENCSR189VXS ChIP-seq EFO:0002067 K562 cell line Homo sapiens GTF2F1-human ENCAB320AVC DNA False 2018-01-30 ENCODE 2 ENCFF071ONN, ENCFF720AUK, ENCFF796JTX 1424442674 ENCODE Processing Pipeline 5cf24b197f262c942200a0740beec3c0 https://www.encodeproject.org/files/ENCFF338NRW/@@download/ENCFF338NRW.bigWig GRCh38 released experiment not submitted to GEO partially characterized antibody ENCFF644QPE bigWig fold change over control ENCSR189VXS ChIP-seq EFO:0002067 K562 cell line Homo sapiens GTF2F1-human ENCAB320AVC DNA False 2018-01-30 ENCODE 1, 2 ENCFF071ONN, ENCFF507AHN, ENCFF720AUK, ENCFF796JTX 1981891084 ENCODE Processing Pipeline bbb2f7a71ed0cd81da2a229d338318cc https://www.encodeproject.org/files/ENCFF644QPE/@@download/ENCFF644QPE.bigWig GRCh38 released experiment not submitted to GEO partially characterized antibody ENCFF866LFO bed narrowPeak peaks ENCSR189VXS ChIP-seq EFO:0002067 K562 cell line Homo sapiens GTF2F1-human ENCAB320AVC DNA False 2018-01-30 ENCODE 1 ENCFF507AHN, ENCFF720AUK, ENCFF796JTX 6906756 ENCODE Processing Pipeline b97382fa12b5978d32865b01dbd23db1 https://www.encodeproject.org/files/ENCFF866LFO/@@download/ENCFF866LFO.bed.gz GRCh38 released experiment not submitted to GEO partially characterized antibody ENCFF817UXN bed narrowPeak peaks ENCSR189VXS ChIP-seq EFO:0002067 K562 cell line Homo sapiens GTF2F1-human ENCAB320AVC DNA False 2018-01-30 ENCODE 2 ENCFF071ONN, ENCFF720AUK, ENCFF796JTX 6907249 ENCODE Processing Pipeline 73e6be6c02a544ad3d4e9ab53de358ed https://www.encodeproject.org/files/ENCFF817UXN/@@download/ENCFF817UXN.bed.gz GRCh38 released experiment not submitted to GEO partially characterized antibody ENCFF529NHH bed narrowPeak peaks ENCSR189VXS ChIP-seq EFO:0002067 K562 cell line Homo sapiens GTF2F1-human ENCAB320AVC DNA False 2018-01-30 ENCODE 1, 2 ENCFF071ONN, ENCFF507AHN, ENCFF720AUK, ENCFF796JTX 7253100 ENCODE Processing Pipeline b6027db908da327baa0af896cd88b093 https://www.encodeproject.org/files/ENCFF529NHH/@@download/ENCFF529NHH.bed.gz GRCh38 released experiment not submitted to GEO partially characterized antibody ENCFF528EQW bigBed narrowPeak peaks ENCSR189VXS ChIP-seq EFO:0002067 K562 cell line Homo sapiens GTF2F1-human ENCAB320AVC DNA False 2018-01-30 ENCODE 2 ENCFF817UXN 13346658 ENCODE Processing Pipeline 88b4cb786e4f593830ba9d0cb8a45609 https://www.encodeproject.org/files/ENCFF528EQW/@@download/ENCFF528EQW.bigBed GRCh38 released experiment not submitted to GEO partially characterized antibody ENCFF315WYL bigBed narrowPeak peaks ENCSR189VXS ChIP-seq EFO:0002067 K562 cell line Homo sapiens GTF2F1-human ENCAB320AVC DNA False 2018-01-30 ENCODE 1, 2 ENCFF529NHH 13141428 ENCODE Processing Pipeline 1264c1d805fe4f63809c5609d76ed310 https://www.encodeproject.org/files/ENCFF315WYL/@@download/ENCFF315WYL.bigBed GRCh38 released experiment not submitted to GEO partially characterized antibody ENCFF762ACV bed narrowPeak conservative idr thresholded peaks ENCSR189VXS ChIP-seq EFO:0002067 K562 cell line Homo sapiens GTF2F1-human ENCAB320AVC DNA False 2018-01-30 ENCODE 1, 2 ENCFF419RSJ, ENCFF529NHH, ENCFF817UXN, ENCFF866LFO 296542 ENCODE Processing Pipeline 922b42b3429ddfe20ed682f3f59d5ddf https://www.encodeproject.org/files/ENCFF762ACV/@@download/ENCFF762ACV.bed.gz GRCh38 released experiment not submitted to GEO partially characterized antibody ENCFF872DSY bigBed narrowPeak conservative idr thresholded peaks ENCSR189VXS ChIP-seq EFO:0002067 K562 cell line Homo sapiens GTF2F1-human ENCAB320AVC DNA False 2018-01-30 ENCODE 1, 2 ENCFF762ACV 621562 ENCODE Processing Pipeline e3ea7787563ab717c8153faa0ebf7ded https://www.encodeproject.org/files/ENCFF872DSY/@@download/ENCFF872DSY.bigBed GRCh38 released experiment not submitted to GEO partially characterized antibody ENCFF713ALB bed narrowPeak optimal idr thresholded peaks ENCSR189VXS ChIP-seq EFO:0002067 K562 cell line Homo sapiens GTF2F1-human ENCAB320AVC DNA False 2018-01-30 ENCODE 1, 2 ENCFF419RSJ, ENCFF529NHH, ENCFF817UXN, ENCFF866LFO 325965 ENCODE Processing Pipeline e7bf6f24985c7a298095f6b94c2adf87 https://www.encodeproject.org/files/ENCFF713ALB/@@download/ENCFF713ALB.bed.gz GRCh38 released experiment not submitted to GEO partially characterized antibody ENCFF906JAN bigBed narrowPeak optimal idr thresholded peaks ENCSR189VXS ChIP-seq EFO:0002067 K562 cell line Homo sapiens GTF2F1-human ENCAB320AVC DNA False 2018-01-30 ENCODE 1, 2 ENCFF713ALB 671380 ENCODE Processing Pipeline 9580dddafa10a20a15589c7d4e202580 https://www.encodeproject.org/files/ENCFF906JAN/@@download/ENCFF906JAN.bigBed GRCh38 released experiment not submitted to GEO partially characterized antibody ENCFF238BHL bigWig signal p-value ENCSR189VXS ChIP-seq EFO:0002067 K562 cell line Homo sapiens GTF2F1-human ENCAB320AVC DNA False 2018-01-30 ENCODE 1 ENCFF262CJE, ENCFF506DFV, ENCFF842XJL 1477299310 ENCODE Processing Pipeline 7f9b2c52ea4030b8a464bd926f96a2b9 https://www.encodeproject.org/files/ENCFF238BHL/@@download/ENCFF238BHL.bigWig hg19 released experiment not submitted to GEO partially characterized antibody ENCFF906QPQ bigWig fold change over control ENCSR189VXS ChIP-seq EFO:0002067 K562 cell line Homo sapiens GTF2F1-human ENCAB320AVC DNA False 2018-01-30 ENCODE 1 ENCFF262CJE, ENCFF506DFV, ENCFF842XJL 1400569241 ENCODE Processing Pipeline 35526ed7c377c2da16935776819132b5 https://www.encodeproject.org/files/ENCFF906QPQ/@@download/ENCFF906QPQ.bigWig hg19 released experiment not submitted to GEO partially characterized antibody ENCFF284RAJ bigWig signal p-value ENCSR189VXS ChIP-seq EFO:0002067 K562 cell line Homo sapiens GTF2F1-human ENCAB320AVC DNA False 2018-01-30 ENCODE 2 ENCFF262CJE, ENCFF502QVA, ENCFF506DFV 1444257543 ENCODE Processing Pipeline 34337f5c8e5035370ab666478d0838ee https://www.encodeproject.org/files/ENCFF284RAJ/@@download/ENCFF284RAJ.bigWig hg19 released experiment not submitted to GEO partially characterized antibody ENCFF655FEV bigWig signal p-value ENCSR189VXS ChIP-seq EFO:0002067 K562 cell line Homo sapiens GTF2F1-human ENCAB320AVC DNA False 2018-01-30 ENCODE 1, 2 ENCFF262CJE, ENCFF502QVA, ENCFF506DFV, ENCFF842XJL 1942270081 ENCODE Processing Pipeline 51d3d0d2adde03a4cc702e8cdddb6d3d https://www.encodeproject.org/files/ENCFF655FEV/@@download/ENCFF655FEV.bigWig hg19 released experiment not submitted to GEO partially characterized antibody ENCFF303HTS bigWig fold change over control ENCSR189VXS ChIP-seq EFO:0002067 K562 cell line Homo sapiens GTF2F1-human ENCAB320AVC DNA False 2018-01-30 ENCODE 2 ENCFF262CJE, ENCFF502QVA, ENCFF506DFV 1433846493 ENCODE Processing Pipeline 99d0bdd15c5e1429d5f8d67136a81b73 https://www.encodeproject.org/files/ENCFF303HTS/@@download/ENCFF303HTS.bigWig hg19 released experiment not submitted to GEO partially characterized antibody ENCFF441OOU bigWig fold change over control ENCSR189VXS ChIP-seq EFO:0002067 K562 cell line Homo sapiens GTF2F1-human ENCAB320AVC DNA False 2018-01-30 ENCODE 1, 2 ENCFF262CJE, ENCFF502QVA, ENCFF506DFV, ENCFF842XJL 1979684418 ENCODE Processing Pipeline dcbb43c5e1c68bcbcd526a9b7c4eb0b1 https://www.encodeproject.org/files/ENCFF441OOU/@@download/ENCFF441OOU.bigWig hg19 released experiment not submitted to GEO partially characterized antibody ENCFF601KTD bed narrowPeak peaks ENCSR189VXS ChIP-seq EFO:0002067 K562 cell line Homo sapiens GTF2F1-human ENCAB320AVC DNA False 2018-01-30 ENCODE 1 ENCFF262CJE, ENCFF506DFV, ENCFF842XJL 6898463 ENCODE Processing Pipeline 3c127fea89d3f7d81af3ae4f316cd256 https://www.encodeproject.org/files/ENCFF601KTD/@@download/ENCFF601KTD.bed.gz hg19 released experiment not submitted to GEO partially characterized antibody ENCFF007QMQ bed narrowPeak peaks ENCSR189VXS ChIP-seq EFO:0002067 K562 cell line Homo sapiens GTF2F1-human ENCAB320AVC DNA False 2018-01-30 ENCODE 2 ENCFF262CJE, ENCFF502QVA, ENCFF506DFV 6900980 ENCODE Processing Pipeline d8e1cf8388b04170b3f1a6067d13be0c https://www.encodeproject.org/files/ENCFF007QMQ/@@download/ENCFF007QMQ.bed.gz hg19 released experiment not submitted to GEO partially characterized antibody ENCFF846SYJ bed narrowPeak peaks ENCSR189VXS ChIP-seq EFO:0002067 K562 cell line Homo sapiens GTF2F1-human ENCAB320AVC DNA False 2018-01-30 ENCODE 1, 2 ENCFF262CJE, ENCFF502QVA, ENCFF506DFV, ENCFF842XJL 7235294 ENCODE Processing Pipeline 25007ee15b2fd753203339b932672eea https://www.encodeproject.org/files/ENCFF846SYJ/@@download/ENCFF846SYJ.bed.gz hg19 released experiment not submitted to GEO partially characterized antibody ENCFF094VSN bigBed narrowPeak peaks ENCSR189VXS ChIP-seq EFO:0002067 K562 cell line Homo sapiens GTF2F1-human ENCAB320AVC DNA False 2018-01-30 ENCODE 1 ENCFF601KTD 13308997 ENCODE Processing Pipeline 7b11c0cfa215093006df9daf661589d1 https://www.encodeproject.org/files/ENCFF094VSN/@@download/ENCFF094VSN.bigBed hg19 released experiment not submitted to GEO partially characterized antibody ENCFF247KHB bigBed narrowPeak peaks ENCSR189VXS ChIP-seq EFO:0002067 K562 cell line Homo sapiens GTF2F1-human ENCAB320AVC DNA False 2018-01-30 ENCODE 2 ENCFF007QMQ 13328839 ENCODE Processing Pipeline 735fc03e4c47c4277d105e331cb70acf https://www.encodeproject.org/files/ENCFF247KHB/@@download/ENCFF247KHB.bigBed hg19 released experiment not submitted to GEO partially characterized antibody ENCFF987ZNM bigBed narrowPeak peaks ENCSR189VXS ChIP-seq EFO:0002067 K562 cell line Homo sapiens GTF2F1-human ENCAB320AVC DNA False 2018-01-30 ENCODE 1, 2 ENCFF846SYJ 13117630 ENCODE Processing Pipeline 58ebc08c7d17d32087be1a47a497aed3 https://www.encodeproject.org/files/ENCFF987ZNM/@@download/ENCFF987ZNM.bigBed hg19 released experiment not submitted to GEO partially characterized antibody ENCFF988FFD bed narrowPeak conservative idr thresholded peaks ENCSR189VXS ChIP-seq EFO:0002067 K562 cell line Homo sapiens GTF2F1-human ENCAB320AVC DNA False 2018-01-30 ENCODE 1, 2 ENCFF001TDO, ENCFF007QMQ, ENCFF601KTD, ENCFF846SYJ 293526 ENCODE Processing Pipeline 937b4ee83ed349aa9b239476938f297e https://www.encodeproject.org/files/ENCFF988FFD/@@download/ENCFF988FFD.bed.gz hg19 released experiment not submitted to GEO partially characterized antibody ENCFF190ADI bigBed narrowPeak conservative idr thresholded peaks ENCSR189VXS ChIP-seq EFO:0002067 K562 cell line Homo sapiens GTF2F1-human ENCAB320AVC DNA False 2018-01-30 ENCODE 1, 2 ENCFF988FFD 612608 ENCODE Processing Pipeline 9b2b397242ccb89e03cbdc9e76c3647b https://www.encodeproject.org/files/ENCFF190ADI/@@download/ENCFF190ADI.bigBed hg19 released experiment not submitted to GEO partially characterized antibody ENCFF530FZL bed narrowPeak optimal idr thresholded peaks ENCSR189VXS ChIP-seq EFO:0002067 K562 cell line Homo sapiens GTF2F1-human ENCAB320AVC DNA False 2018-01-30 ENCODE 1, 2 ENCFF001TDO, ENCFF007QMQ, ENCFF601KTD, ENCFF846SYJ 329728 ENCODE Processing Pipeline 777dde87a6c7533afb8183cab4ad171f https://www.encodeproject.org/files/ENCFF530FZL/@@download/ENCFF530FZL.bed.gz hg19 released experiment not submitted to GEO partially characterized antibody ENCFF649EGG bigBed narrowPeak optimal idr thresholded peaks ENCSR189VXS ChIP-seq EFO:0002067 K562 cell line Homo sapiens GTF2F1-human ENCAB320AVC DNA False 2018-01-30 ENCODE 1, 2 ENCFF530FZL 673358 ENCODE Processing Pipeline 2c9fe4f04b3593f115cd8450611bab24 https://www.encodeproject.org/files/ENCFF649EGG/@@download/ENCFF649EGG.bigBed hg19 released experiment not submitted to GEO partially characterized antibody ENCFF677KGV bam unfiltered alignments ENCSR068VRA ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM7-human ENCAB317YKX DNA False 2018-02-14 ENCODE 2 100 ENCFF051EDJ, ENCFF807MUK, ENCFF849GAI 6203289764 ENCODE Processing Pipeline f86e58f2676b28f71ec69d08db165a01 https://www.encodeproject.org/files/ENCFF677KGV/@@download/ENCFF677KGV.bam hg19 released borderline replicate concordance experiment not submitted to GEO ENCFF143XTI bam unfiltered alignments ENCSR068VRA ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM7-human ENCAB317YKX DNA False 2018-02-14 ENCODE 1 100 ENCFF233EXE, ENCFF708EDK, ENCFF807MUK 4390949867 ENCODE Processing Pipeline d373acc93219521e23c01f99aafd6c52 https://www.encodeproject.org/files/ENCFF143XTI/@@download/ENCFF143XTI.bam hg19 released borderline replicate concordance experiment not submitted to GEO ENCFF233EXE fastq reads ENCSR068VRA ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM7-human ENCAB317YKX DNA False 2018-02-14 ENCODE 1 1 100 paired-ended 1 ENCFF708EDK 1965072608 Michael Snyder, Stanford 9928d588110b65ccf5131eac62f8a1f7 https://www.encodeproject.org/files/ENCFF233EXE/@@download/ENCFF233EXE.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFF/ released borderline replicate concordance experiment not submitted to GEO ENCFF708EDK fastq reads ENCSR068VRA ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM7-human ENCAB317YKX DNA False 2018-02-14 ENCODE 1 1 100 paired-ended 2 ENCFF233EXE 2004382846 Michael Snyder, Stanford 1ce69cdf912a1de5d6ab308c797659b0 https://www.encodeproject.org/files/ENCFF708EDK/@@download/ENCFF708EDK.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFH/ released borderline replicate concordance experiment not submitted to GEO ENCFF051EDJ fastq reads ENCSR068VRA ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM7-human ENCAB317YKX DNA False 2018-02-14 ENCODE 2 1 100 paired-ended 2 ENCFF849GAI 2876271766 Michael Snyder, Stanford b52d6c5d9ce67fa190d64cdffaf41b8b https://www.encodeproject.org/files/ENCFF051EDJ/@@download/ENCFF051EDJ.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFH/ released borderline replicate concordance experiment not submitted to GEO ENCFF849GAI fastq reads ENCSR068VRA ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM7-human ENCAB317YKX DNA False 2018-02-14 ENCODE 2 1 100 paired-ended 1 ENCFF051EDJ 2822272800 Michael Snyder, Stanford 318838dd58c7cbdac1b51c64cb311e57 https://www.encodeproject.org/files/ENCFF849GAI/@@download/ENCFF849GAI.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFF/ released borderline replicate concordance experiment not submitted to GEO ENCFF640FIB bam alignments ENCSR068VRA ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM7-human ENCAB317YKX DNA False 2018-02-14 ENCODE 1 ENCFF233EXE, ENCFF708EDK, ENCFF807MUK 3654698745 ENCODE Processing Pipeline cfc89bfa48484bd2076697738ce75e97 https://www.encodeproject.org/files/ENCFF640FIB/@@download/ENCFF640FIB.bam hg19 released borderline replicate concordance experiment not submitted to GEO ENCFF972MSK bam alignments ENCSR068VRA ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM7-human ENCAB317YKX DNA False 2018-02-14 ENCODE 2 ENCFF051EDJ, ENCFF807MUK, ENCFF849GAI 5301139338 ENCODE Processing Pipeline 04183fe8d8f86a1160ecd3d14fc8933f https://www.encodeproject.org/files/ENCFF972MSK/@@download/ENCFF972MSK.bam hg19 released borderline replicate concordance experiment not submitted to GEO ENCFF490REI bam unfiltered alignments ENCSR068VRA ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM7-human ENCAB317YKX DNA False 2018-02-14 ENCODE 2 100 ENCFF051EDJ, ENCFF643CGH, ENCFF849GAI 6211243888 ENCODE Processing Pipeline 834ec16e3b5610d42337a7b8e0c617f6 https://www.encodeproject.org/files/ENCFF490REI/@@download/ENCFF490REI.bam GRCh38 released borderline replicate concordance experiment not submitted to GEO ENCFF685NTK bam unfiltered alignments ENCSR068VRA ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM7-human ENCAB317YKX DNA False 2018-02-14 ENCODE 1 100 ENCFF233EXE, ENCFF643CGH, ENCFF708EDK 4396820847 ENCODE Processing Pipeline 0f8fcfc57965c26c23bba7335da60d27 https://www.encodeproject.org/files/ENCFF685NTK/@@download/ENCFF685NTK.bam GRCh38 released borderline replicate concordance experiment not submitted to GEO ENCFF080WKM bam alignments ENCSR068VRA ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM7-human ENCAB317YKX DNA False 2018-02-14 ENCODE 1 100 ENCFF233EXE, ENCFF643CGH, ENCFF708EDK 3657686210 ENCODE Processing Pipeline 6cd58c79cf1fe6a1d61bf7996be9d237 https://www.encodeproject.org/files/ENCFF080WKM/@@download/ENCFF080WKM.bam GRCh38 released borderline replicate concordance experiment not submitted to GEO ENCFF954COY bam alignments ENCSR068VRA ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM7-human ENCAB317YKX DNA False 2018-02-14 ENCODE 2 100 ENCFF051EDJ, ENCFF643CGH, ENCFF849GAI 5304822280 ENCODE Processing Pipeline 3cc16e63748e2c24fa1587790c489dd1 https://www.encodeproject.org/files/ENCFF954COY/@@download/ENCFF954COY.bam GRCh38 released borderline replicate concordance experiment not submitted to GEO ENCFF410FNM bed narrowPeak peaks ENCSR068VRA ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM7-human ENCAB317YKX DNA False 2018-02-14 ENCODE 1, 2 ENCFF080WKM, ENCFF910IKB, ENCFF954COY 7025886 ENCODE Processing Pipeline f229163b094a28532bd703ab0a2df47f https://www.encodeproject.org/files/ENCFF410FNM/@@download/ENCFF410FNM.bed.gz GRCh38 released borderline replicate concordance experiment not submitted to GEO ENCFF200WLV bigWig signal p-value ENCSR068VRA ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM7-human ENCAB317YKX DNA False 2018-02-14 ENCODE 1 ENCFF080WKM, ENCFF910IKB 1209563514 ENCODE Processing Pipeline 97323d2fb47bb9388c3651b741274ef6 https://www.encodeproject.org/files/ENCFF200WLV/@@download/ENCFF200WLV.bigWig GRCh38 released borderline replicate concordance experiment not submitted to GEO ENCFF452OMD bigWig fold change over control ENCSR068VRA ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM7-human ENCAB317YKX DNA False 2018-02-14 ENCODE 1 ENCFF080WKM, ENCFF910IKB 1084854910 ENCODE Processing Pipeline 625004a035f0957c054691ff9e2a4477 https://www.encodeproject.org/files/ENCFF452OMD/@@download/ENCFF452OMD.bigWig GRCh38 released borderline replicate concordance experiment not submitted to GEO ENCFF010ZCJ bigWig signal p-value ENCSR068VRA ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM7-human ENCAB317YKX DNA False 2018-02-14 ENCODE 2 ENCFF910IKB, ENCFF954COY 1410738162 ENCODE Processing Pipeline b39e8b094c53caa7601898518a690818 https://www.encodeproject.org/files/ENCFF010ZCJ/@@download/ENCFF010ZCJ.bigWig GRCh38 released borderline replicate concordance experiment not submitted to GEO ENCFF805GQZ bigWig signal p-value ENCSR068VRA ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM7-human ENCAB317YKX DNA False 2018-02-14 ENCODE 1, 2 ENCFF080WKM, ENCFF910IKB, ENCFF954COY 1551873314 ENCODE Processing Pipeline 24a9dd1785fcc99a4db0acfb89ae73a3 https://www.encodeproject.org/files/ENCFF805GQZ/@@download/ENCFF805GQZ.bigWig GRCh38 released borderline replicate concordance experiment not submitted to GEO ENCFF191JED bigWig fold change over control ENCSR068VRA ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM7-human ENCAB317YKX DNA False 2018-02-14 ENCODE 2 ENCFF910IKB, ENCFF954COY 1410179656 ENCODE Processing Pipeline fcb3aef00f284704e430d3208bf7b932 https://www.encodeproject.org/files/ENCFF191JED/@@download/ENCFF191JED.bigWig GRCh38 released borderline replicate concordance experiment not submitted to GEO ENCFF977JAS bigWig fold change over control ENCSR068VRA ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM7-human ENCAB317YKX DNA False 2018-02-14 ENCODE 1, 2 ENCFF080WKM, ENCFF910IKB, ENCFF954COY 1820312616 ENCODE Processing Pipeline 8cfc9044ddf7a638dc36586c0a64ec08 https://www.encodeproject.org/files/ENCFF977JAS/@@download/ENCFF977JAS.bigWig GRCh38 released borderline replicate concordance experiment not submitted to GEO ENCFF161ASS bed narrowPeak peaks ENCSR068VRA ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM7-human ENCAB317YKX DNA False 2018-02-14 ENCODE 1 ENCFF080WKM, ENCFF910IKB 6301400 ENCODE Processing Pipeline 5732d8ad2839a235cf55702e77f948d8 https://www.encodeproject.org/files/ENCFF161ASS/@@download/ENCFF161ASS.bed.gz GRCh38 released borderline replicate concordance experiment not submitted to GEO ENCFF957RMO bed narrowPeak peaks ENCSR068VRA ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM7-human ENCAB317YKX DNA False 2018-02-14 ENCODE 2 ENCFF910IKB, ENCFF954COY 6500377 ENCODE Processing Pipeline 92ee6349f124dd5fe7291250078a631d https://www.encodeproject.org/files/ENCFF957RMO/@@download/ENCFF957RMO.bed.gz GRCh38 released borderline replicate concordance experiment not submitted to GEO ENCFF167XCM bigBed narrowPeak peaks ENCSR068VRA ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM7-human ENCAB317YKX DNA False 2018-02-14 ENCODE 1 ENCFF161ASS 11177001 ENCODE Processing Pipeline 64b0c0c8cebfd76796c200d45d483905 https://www.encodeproject.org/files/ENCFF167XCM/@@download/ENCFF167XCM.bigBed GRCh38 released borderline replicate concordance experiment not submitted to GEO ENCFF842OIK bigBed narrowPeak peaks ENCSR068VRA ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM7-human ENCAB317YKX DNA False 2018-02-14 ENCODE 2 ENCFF957RMO 11097020 ENCODE Processing Pipeline b75fd6b4ece0b23725327f3da8896de6 https://www.encodeproject.org/files/ENCFF842OIK/@@download/ENCFF842OIK.bigBed GRCh38 released borderline replicate concordance experiment not submitted to GEO ENCFF919PLQ bigBed narrowPeak peaks ENCSR068VRA ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM7-human ENCAB317YKX DNA False 2018-02-14 ENCODE 1, 2 ENCFF410FNM 10931136 ENCODE Processing Pipeline 86bd4ad4fd230f1dad2686a4644979bb https://www.encodeproject.org/files/ENCFF919PLQ/@@download/ENCFF919PLQ.bigBed GRCh38 released borderline replicate concordance experiment not submitted to GEO ENCFF908GXO bed narrowPeak conservative idr thresholded peaks ENCSR068VRA ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM7-human ENCAB317YKX DNA False 2018-02-14 ENCODE 1, 2 ENCFF161ASS, ENCFF410FNM, ENCFF419RSJ, ENCFF957RMO 25365 ENCODE Processing Pipeline 571a1f07e6945be96bc548d8b42e6487 https://www.encodeproject.org/files/ENCFF908GXO/@@download/ENCFF908GXO.bed.gz GRCh38 released borderline replicate concordance experiment not submitted to GEO ENCFF346GLE bigBed narrowPeak conservative idr thresholded peaks ENCSR068VRA ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM7-human ENCAB317YKX DNA False 2018-02-14 ENCODE 1, 2 ENCFF908GXO 95772 ENCODE Processing Pipeline 1bbf8a1011af3b284efd2240dfbc8ecb https://www.encodeproject.org/files/ENCFF346GLE/@@download/ENCFF346GLE.bigBed GRCh38 released borderline replicate concordance experiment not submitted to GEO ENCFF914ELA bed narrowPeak optimal idr thresholded peaks ENCSR068VRA ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM7-human ENCAB317YKX DNA False 2018-02-14 ENCODE 1, 2 ENCFF161ASS, ENCFF410FNM, ENCFF419RSJ, ENCFF957RMO 51593 ENCODE Processing Pipeline f8af613a8b6d0c650b2e170e962ed7ba https://www.encodeproject.org/files/ENCFF914ELA/@@download/ENCFF914ELA.bed.gz GRCh38 released borderline replicate concordance experiment not submitted to GEO ENCFF139XUI bigBed narrowPeak optimal idr thresholded peaks ENCSR068VRA ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM7-human ENCAB317YKX DNA False 2018-02-14 ENCODE 1, 2 ENCFF914ELA 157189 ENCODE Processing Pipeline 5e68fc409417683d42ab0536c66c32bb https://www.encodeproject.org/files/ENCFF139XUI/@@download/ENCFF139XUI.bigBed GRCh38 released borderline replicate concordance experiment not submitted to GEO ENCFF437IAV bigWig signal p-value ENCSR068VRA ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM7-human ENCAB317YKX DNA False 2018-02-14 ENCODE 1 ENCFF581ZJL, ENCFF640FIB 979648229 ENCODE Processing Pipeline 2b316e338dbad0561f5d514d5704e966 https://www.encodeproject.org/files/ENCFF437IAV/@@download/ENCFF437IAV.bigWig hg19 released borderline replicate concordance experiment not submitted to GEO ENCFF907MEI bigWig fold change over control ENCSR068VRA ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM7-human ENCAB317YKX DNA False 2018-02-14 ENCODE 1 ENCFF581ZJL, ENCFF640FIB 1082882000 ENCODE Processing Pipeline 8e12d2376db8a4993b54d10cdad2bd78 https://www.encodeproject.org/files/ENCFF907MEI/@@download/ENCFF907MEI.bigWig hg19 released borderline replicate concordance experiment not submitted to GEO ENCFF246LQR bigWig signal p-value ENCSR068VRA ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM7-human ENCAB317YKX DNA False 2018-02-14 ENCODE 2 ENCFF581ZJL, ENCFF972MSK 1134765187 ENCODE Processing Pipeline 6f36cf31687ae292d1c687b5c745ec27 https://www.encodeproject.org/files/ENCFF246LQR/@@download/ENCFF246LQR.bigWig hg19 released borderline replicate concordance experiment not submitted to GEO ENCFF482ALC bigWig signal p-value ENCSR068VRA ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM7-human ENCAB317YKX DNA False 2018-02-14 ENCODE 1, 2 ENCFF581ZJL, ENCFF640FIB, ENCFF972MSK 1549822225 ENCODE Processing Pipeline 62f35a9329a6d9dd9a2acc32632cd7c2 https://www.encodeproject.org/files/ENCFF482ALC/@@download/ENCFF482ALC.bigWig hg19 released borderline replicate concordance experiment not submitted to GEO ENCFF583AGW bigWig fold change over control ENCSR068VRA ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM7-human ENCAB317YKX DNA False 2018-02-14 ENCODE 2 ENCFF581ZJL, ENCFF972MSK 1384348183 ENCODE Processing Pipeline fbaebf32fdaccb65dba46306c1a5fe63 https://www.encodeproject.org/files/ENCFF583AGW/@@download/ENCFF583AGW.bigWig hg19 released borderline replicate concordance experiment not submitted to GEO ENCFF272DJX bed narrowPeak peaks ENCSR068VRA ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM7-human ENCAB317YKX DNA False 2018-02-14 ENCODE 1, 2 ENCFF581ZJL, ENCFF640FIB, ENCFF972MSK 7021222 ENCODE Processing Pipeline b52d9c4d0b337ae699d028d93bc3beee https://www.encodeproject.org/files/ENCFF272DJX/@@download/ENCFF272DJX.bed.gz hg19 released borderline replicate concordance experiment not submitted to GEO ENCFF239NUO bed narrowPeak conservative idr thresholded peaks ENCSR068VRA ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM7-human ENCAB317YKX DNA False 2018-02-14 ENCODE 1, 2 ENCFF001TDO, ENCFF228DXI, ENCFF258OQI, ENCFF272DJX 25827 ENCODE Processing Pipeline c8585d315d35508b3db2b386ca1f7812 https://www.encodeproject.org/files/ENCFF239NUO/@@download/ENCFF239NUO.bed.gz hg19 released borderline replicate concordance experiment not submitted to GEO ENCFF094YJX bigBed narrowPeak optimal idr thresholded peaks ENCSR068VRA ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM7-human ENCAB317YKX DNA False 2018-02-14 ENCODE 1, 2 ENCFF452SVO 157645 ENCODE Processing Pipeline 0e561e90a50cb308ed12d485e1fcb93e https://www.encodeproject.org/files/ENCFF094YJX/@@download/ENCFF094YJX.bigBed hg19 released borderline replicate concordance experiment not submitted to GEO ENCFF087DFZ bigWig fold change over control ENCSR068VRA ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM7-human ENCAB317YKX DNA False 2018-02-14 ENCODE 1, 2 ENCFF581ZJL, ENCFF640FIB, ENCFF972MSK 1816709611 ENCODE Processing Pipeline 057e7867a42533b6be8e9235785fa615 https://www.encodeproject.org/files/ENCFF087DFZ/@@download/ENCFF087DFZ.bigWig hg19 released borderline replicate concordance experiment not submitted to GEO ENCFF470QGF bigBed narrowPeak conservative idr thresholded peaks ENCSR068VRA ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM7-human ENCAB317YKX DNA False 2018-02-14 ENCODE 1, 2 ENCFF239NUO 94590 ENCODE Processing Pipeline ad1791d686da3fbfdfb593bc58788621 https://www.encodeproject.org/files/ENCFF470QGF/@@download/ENCFF470QGF.bigBed hg19 released borderline replicate concordance experiment not submitted to GEO ENCFF228DXI bed narrowPeak peaks ENCSR068VRA ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM7-human ENCAB317YKX DNA False 2018-02-14 ENCODE 1 ENCFF581ZJL, ENCFF640FIB 6296303 ENCODE Processing Pipeline 4ae1fa01ff3ce70111549ba834eb89a5 https://www.encodeproject.org/files/ENCFF228DXI/@@download/ENCFF228DXI.bed.gz hg19 released borderline replicate concordance experiment not submitted to GEO ENCFF048PHY bigBed narrowPeak peaks ENCSR068VRA ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM7-human ENCAB317YKX DNA False 2018-02-14 ENCODE 2 ENCFF258OQI 11084254 ENCODE Processing Pipeline c699ead240d73230ec472791364901c4 https://www.encodeproject.org/files/ENCFF048PHY/@@download/ENCFF048PHY.bigBed hg19 released borderline replicate concordance experiment not submitted to GEO ENCFF285LOK bigBed narrowPeak peaks ENCSR068VRA ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM7-human ENCAB317YKX DNA False 2018-02-14 ENCODE 1, 2 ENCFF272DJX 10916160 ENCODE Processing Pipeline 7308e70c121f22cd9438ed918659dc86 https://www.encodeproject.org/files/ENCFF285LOK/@@download/ENCFF285LOK.bigBed hg19 released borderline replicate concordance experiment not submitted to GEO ENCFF258OQI bed narrowPeak peaks ENCSR068VRA ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM7-human ENCAB317YKX DNA False 2018-02-14 ENCODE 2 ENCFF581ZJL, ENCFF972MSK 6502377 ENCODE Processing Pipeline de5c501ce55e29692ecdc1d0c60d8024 https://www.encodeproject.org/files/ENCFF258OQI/@@download/ENCFF258OQI.bed.gz hg19 released borderline replicate concordance experiment not submitted to GEO ENCFF276BCK bigBed narrowPeak peaks ENCSR068VRA ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM7-human ENCAB317YKX DNA False 2018-02-14 ENCODE 1 ENCFF228DXI 11156930 ENCODE Processing Pipeline d138f4c422ba4b171cecc8646713bba1 https://www.encodeproject.org/files/ENCFF276BCK/@@download/ENCFF276BCK.bigBed hg19 released borderline replicate concordance experiment not submitted to GEO ENCFF452SVO bed narrowPeak optimal idr thresholded peaks ENCSR068VRA ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM7-human ENCAB317YKX DNA False 2018-02-14 ENCODE 1, 2 ENCFF001TDO, ENCFF228DXI, ENCFF258OQI, ENCFF272DJX 54084 ENCODE Processing Pipeline fca29f9dbc82e6d3e889b2552c4d53bd https://www.encodeproject.org/files/ENCFF452SVO/@@download/ENCFF452SVO.bed.gz hg19 released borderline replicate concordance experiment not submitted to GEO ENCFF000ZDP bam alignments ENCSR000EFR ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZC3H11A-human ENCAB000AMN DNA see document see document False 2012-08-20 ENCODE 2 1 503643279 Michael Snyder, Stanford bbf5fd4bcfa6ef7a65079da7248d301e https://www.encodeproject.org/files/ENCFF000ZDP/@@download/ENCFF000ZDP.bam hg19 archived low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample, missing derived_from ENCFF000ZDQ bam alignments ENCSR000EFR ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZC3H11A-human ENCAB000AMN DNA see document see document False 2012-08-20 ENCODE 1 1 579088242 Michael Snyder, Stanford bc547c3e2a0fe94e699277bb15348e64 https://www.encodeproject.org/files/ENCFF000ZDQ/@@download/ENCFF000ZDQ.bam hg19 archived low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample, missing derived_from ENCFF000ZDR bigBed narrowPeak peaks ENCSR000EFR ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZC3H11A-human ENCAB000AMN DNA see document see document False 2012-08-20 ENCODE ENCFF001VPK 1398466 Michael Snyder, Stanford 4748775aa1844723e64792510da4e0a7 https://www.encodeproject.org/files/ENCFF000ZDR/@@download/ENCFF000ZDR.bigBed hg19 archived low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF000ZDS fastq reads ENCSR000EFR ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZC3H11A-human ENCAB000AMN DNA see document see document False 2012-08-20 ENCODE 1 1 36 single-ended 1122255466 Michael Snyder, Stanford 4e5d9e0eb4557589617cdb2377aaa0fb https://www.encodeproject.org/files/ENCFF000ZDS/@@download/ENCFF000ZDS.fastq.gz Illumina Genome Analyzer /files/ENCFF000YRB/ released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF000ZDU fastq reads ENCSR000EFR ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZC3H11A-human ENCAB000AMN DNA see document see document False 2012-08-20 ENCODE 2 1 36 single-ended 874537880 Michael Snyder, Stanford 48fee2fcb08e917c67ebd4a5aa3fe825 https://www.encodeproject.org/files/ENCFF000ZDU/@@download/ENCFF000ZDU.fastq.gz Illumina Genome Analyzer /files/ENCFF000YRB/ released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF000ZDW bigWig signal ENCSR000EFR ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZC3H11A-human ENCAB000AMN DNA see document see document False 2012-08-20 ENCODE 400473008 Michael Snyder, Stanford cefcaa7b3dc68affc2d7743caf13312e https://www.encodeproject.org/files/ENCFF000ZDW/@@download/ENCFF000ZDW.bigWig hg19 archived low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample, missing derived_from ENCFF001VPK bed narrowPeak peaks ENCSR000EFR ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZC3H11A-human ENCAB000AMN DNA see document see document False 2012-08-20 ENCODE 609225 Michael Snyder, Stanford f3c6590064e9f00e2d27030c95559992 https://www.encodeproject.org/files/ENCFF001VPK/@@download/ENCFF001VPK.bed.gz hg19 archived low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample, missing derived_from ENCFF537UFC bam unfiltered alignments ENCSR000EFR ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZC3H11A-human ENCAB000AMN DNA see document see document False 2012-08-20 ENCODE 2 36 ENCFF000ZDU, ENCFF643CGH 1020046592 ENCODE Processing Pipeline a385cee84bb8e222da9d3609b74c5e8e https://www.encodeproject.org/files/ENCFF537UFC/@@download/ENCFF537UFC.bam GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF161ZFC bam alignments ENCSR000EFR ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZC3H11A-human ENCAB000AMN DNA see document see document False 2012-08-20 ENCODE 2 36 ENCFF000ZDU, ENCFF643CGH 702389605 ENCODE Processing Pipeline f347d10e82943edddda3693258b7baf2 https://www.encodeproject.org/files/ENCFF161ZFC/@@download/ENCFF161ZFC.bam GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF718SZZ bam alignments ENCSR000EFR ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZC3H11A-human ENCAB000AMN DNA see document see document False 2012-08-20 ENCODE 1 36 ENCFF000ZDS, ENCFF643CGH 903635803 ENCODE Processing Pipeline e37e1e5a2a5ea56c22c1fe808f032dbe https://www.encodeproject.org/files/ENCFF718SZZ/@@download/ENCFF718SZZ.bam GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF235TXF bam unfiltered alignments ENCSR000EFR ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZC3H11A-human ENCAB000AMN DNA see document see document False 2012-08-20 ENCODE 1 36 ENCFF000ZDS, ENCFF643CGH 1304645949 ENCODE Processing Pipeline 912990a3add81110ade52ba47d5959b6 https://www.encodeproject.org/files/ENCFF235TXF/@@download/ENCFF235TXF.bam GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF145QPE bam unfiltered alignments ENCSR000EFR ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZC3H11A-human ENCAB000AMN DNA see document see document False 2012-08-20 ENCODE 2 36 ENCFF000ZDU, ENCFF807MUK 1015973327 ENCODE Processing Pipeline 678f202fcdb9c045d0016d657a50ff06 https://www.encodeproject.org/files/ENCFF145QPE/@@download/ENCFF145QPE.bam hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF996ZXG bam alignments ENCSR000EFR ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZC3H11A-human ENCAB000AMN DNA see document see document False 2012-08-20 ENCODE 2 36 ENCFF000ZDU, ENCFF807MUK 702909939 ENCODE Processing Pipeline 4ce3fcd1bb05a49d9d2f820d87fb7e06 https://www.encodeproject.org/files/ENCFF996ZXG/@@download/ENCFF996ZXG.bam hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF288WKU bam unfiltered alignments ENCSR000EFR ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZC3H11A-human ENCAB000AMN DNA see document see document False 2012-08-20 ENCODE 1 36 ENCFF000ZDS, ENCFF807MUK 1298980796 ENCODE Processing Pipeline cf529f14fda521988537c0b3269e407b https://www.encodeproject.org/files/ENCFF288WKU/@@download/ENCFF288WKU.bam hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF349TZM bam alignments ENCSR000EFR ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZC3H11A-human ENCAB000AMN DNA see document see document False 2012-08-20 ENCODE 1 36 ENCFF000ZDS, ENCFF807MUK 904249284 ENCODE Processing Pipeline 7f0b16d70cfb954634729119e6084cec https://www.encodeproject.org/files/ENCFF349TZM/@@download/ENCFF349TZM.bam hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF489QVZ bigWig signal p-value ENCSR000EFR ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZC3H11A-human ENCAB000AMN DNA see document see document False 2012-08-20 ENCODE 1 ENCFF718SZZ 598170949 ENCODE Processing Pipeline 988e8ba1899e9ae407ca0264657e6d27 https://www.encodeproject.org/files/ENCFF489QVZ/@@download/ENCFF489QVZ.bigWig GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF771RQO bigWig signal p-value ENCSR000EFR ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZC3H11A-human ENCAB000AMN DNA see document see document False 2012-08-20 ENCODE 2 ENCFF161ZFC 549486673 ENCODE Processing Pipeline 2594239fd04748477ddf16f47d46504b https://www.encodeproject.org/files/ENCFF771RQO/@@download/ENCFF771RQO.bigWig GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF164BEN bigWig signal p-value ENCSR000EFR ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZC3H11A-human ENCAB000AMN DNA see document see document False 2012-08-20 ENCODE 1, 2 ENCFF161ZFC, ENCFF718SZZ 552630688 ENCODE Processing Pipeline 421571e09ccd72a4f7580da7abca9f49 https://www.encodeproject.org/files/ENCFF164BEN/@@download/ENCFF164BEN.bigWig GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF409EDA bigWig fold change over control ENCSR000EFR ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZC3H11A-human ENCAB000AMN DNA see document see document False 2012-08-20 ENCODE 1 ENCFF718SZZ 442702037 ENCODE Processing Pipeline 66c01e19dcf09270300e32d3def1a363 https://www.encodeproject.org/files/ENCFF409EDA/@@download/ENCFF409EDA.bigWig GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF172IXA bigWig fold change over control ENCSR000EFR ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZC3H11A-human ENCAB000AMN DNA see document see document False 2012-08-20 ENCODE 2 ENCFF161ZFC 358352589 ENCODE Processing Pipeline 95855a725d9db5d6d685a6794779c4f2 https://www.encodeproject.org/files/ENCFF172IXA/@@download/ENCFF172IXA.bigWig GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF387NUG bed narrowPeak peaks ENCSR000EFR ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZC3H11A-human ENCAB000AMN DNA see document see document False 2012-08-20 ENCODE 1 ENCFF718SZZ 4550240 ENCODE Processing Pipeline bea9176efc8c355c2d2e6de5e6edb471 https://www.encodeproject.org/files/ENCFF387NUG/@@download/ENCFF387NUG.bed.gz GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF548IGN bigBed narrowPeak peaks ENCSR000EFR ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZC3H11A-human ENCAB000AMN DNA see document see document False 2012-08-20 ENCODE 1, 2 ENCFF983XVD 11078934 ENCODE Processing Pipeline 02b1cf80a0b706e782dda09bbf21400b https://www.encodeproject.org/files/ENCFF548IGN/@@download/ENCFF548IGN.bigBed GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF739EZV bigBed narrowPeak conservative idr thresholded peaks ENCSR000EFR ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZC3H11A-human ENCAB000AMN DNA see document see document False 2012-08-20 ENCODE 1, 2 ENCFF284LLF 143055 ENCODE Processing Pipeline a4cc939685b77b14c8dd6ed21e1a1fa2 https://www.encodeproject.org/files/ENCFF739EZV/@@download/ENCFF739EZV.bigBed GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF478PGJ bed narrowPeak optimal idr thresholded peaks ENCSR000EFR ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZC3H11A-human ENCAB000AMN DNA see document see document False 2012-08-20 ENCODE 1, 2 ENCFF276XFZ, ENCFF387NUG, ENCFF419RSJ, ENCFF983XVD 51015 ENCODE Processing Pipeline e3e6d898f696b41259e0fb40a31318f4 https://www.encodeproject.org/files/ENCFF478PGJ/@@download/ENCFF478PGJ.bed.gz GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF276XFZ bed narrowPeak peaks ENCSR000EFR ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZC3H11A-human ENCAB000AMN DNA see document see document False 2012-08-20 ENCODE 2 ENCFF161ZFC 4684109 ENCODE Processing Pipeline 2411bf1f92e85156767b7a8928604d30 https://www.encodeproject.org/files/ENCFF276XFZ/@@download/ENCFF276XFZ.bed.gz GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF983XVD bed narrowPeak peaks ENCSR000EFR ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZC3H11A-human ENCAB000AMN DNA see document see document False 2012-08-20 ENCODE 1, 2 ENCFF161ZFC, ENCFF718SZZ 5571476 ENCODE Processing Pipeline 524574740469d288291a71a01211529a https://www.encodeproject.org/files/ENCFF983XVD/@@download/ENCFF983XVD.bed.gz GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF232IKX bigBed narrowPeak peaks ENCSR000EFR ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZC3H11A-human ENCAB000AMN DNA see document see document False 2012-08-20 ENCODE 1 ENCFF387NUG 10945803 ENCODE Processing Pipeline 85e2c4cb8b93c6f71b3db832d548ebfe https://www.encodeproject.org/files/ENCFF232IKX/@@download/ENCFF232IKX.bigBed GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF267EQO bigWig fold change over control ENCSR000EFR ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZC3H11A-human ENCAB000AMN DNA see document see document False 2012-08-20 ENCODE 1, 2 ENCFF161ZFC, ENCFF718SZZ 692843663 ENCODE Processing Pipeline 965e987d2923b7f3db979b76ac0ca989 https://www.encodeproject.org/files/ENCFF267EQO/@@download/ENCFF267EQO.bigWig GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF579AMU bigBed narrowPeak peaks ENCSR000EFR ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZC3H11A-human ENCAB000AMN DNA see document see document False 2012-08-20 ENCODE 2 ENCFF276XFZ 10811404 ENCODE Processing Pipeline 0c100f875a4c368853dc684f212dd071 https://www.encodeproject.org/files/ENCFF579AMU/@@download/ENCFF579AMU.bigBed GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF284LLF bed narrowPeak conservative idr thresholded peaks ENCSR000EFR ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZC3H11A-human ENCAB000AMN DNA see document see document False 2012-08-20 ENCODE 1, 2 ENCFF276XFZ, ENCFF387NUG, ENCFF419RSJ, ENCFF983XVD 43584 ENCODE Processing Pipeline 48cba72f13f5d32c0e02ea6d62c2666f https://www.encodeproject.org/files/ENCFF284LLF/@@download/ENCFF284LLF.bed.gz GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF899OSC bigBed narrowPeak optimal idr thresholded peaks ENCSR000EFR ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZC3H11A-human ENCAB000AMN DNA see document see document False 2012-08-20 ENCODE 1, 2 ENCFF478PGJ 156378 ENCODE Processing Pipeline 3f7a8771dae2db5ae661128813518c3a https://www.encodeproject.org/files/ENCFF899OSC/@@download/ENCFF899OSC.bigBed GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF421GNC bigWig fold change over control ENCSR000EFR ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZC3H11A-human ENCAB000AMN DNA see document see document False 2012-08-20 ENCODE 1 ENCFF349TZM, ENCFF710NTS 442144090 ENCODE Processing Pipeline da20d0c2cfe720cf23c8e3aae362c237 https://www.encodeproject.org/files/ENCFF421GNC/@@download/ENCFF421GNC.bigWig hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF778LXR bigWig fold change over control ENCSR000EFR ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZC3H11A-human ENCAB000AMN DNA see document see document False 2012-08-20 ENCODE 2 ENCFF710NTS, ENCFF996ZXG 360859926 ENCODE Processing Pipeline 91dba892e130610f15121aa6cd1c3915 https://www.encodeproject.org/files/ENCFF778LXR/@@download/ENCFF778LXR.bigWig hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF678SGN bigBed narrowPeak peaks ENCSR000EFR ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZC3H11A-human ENCAB000AMN DNA see document see document False 2012-08-20 ENCODE 1, 2 ENCFF305IJI 11080166 ENCODE Processing Pipeline 6d2e31de1890811c3143ceb2ae91527d https://www.encodeproject.org/files/ENCFF678SGN/@@download/ENCFF678SGN.bigBed hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF029VKA bigWig fold change over control ENCSR000EFR ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZC3H11A-human ENCAB000AMN DNA see document see document False 2012-08-20 ENCODE 1, 2 ENCFF349TZM, ENCFF710NTS, ENCFF996ZXG 679467662 ENCODE Processing Pipeline 72a3aec2a42f8dbb6795623d77f72a70 https://www.encodeproject.org/files/ENCFF029VKA/@@download/ENCFF029VKA.bigWig hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF804JPD bed narrowPeak conservative idr thresholded peaks ENCSR000EFR ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZC3H11A-human ENCAB000AMN DNA see document see document False 2012-08-20 ENCODE 1, 2 ENCFF001TDO, ENCFF305IJI, ENCFF547MRJ, ENCFF726OZS 45555 ENCODE Processing Pipeline 949fec62c4002286469a1fa4866914d2 https://www.encodeproject.org/files/ENCFF804JPD/@@download/ENCFF804JPD.bed.gz hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF651LOC bigWig signal p-value ENCSR000EFR ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZC3H11A-human ENCAB000AMN DNA see document see document False 2012-08-20 ENCODE 1 ENCFF349TZM, ENCFF710NTS 545604874 ENCODE Processing Pipeline 6b6487ce60dd6dae6c006b04c53d9152 https://www.encodeproject.org/files/ENCFF651LOC/@@download/ENCFF651LOC.bigWig hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF726OZS bed narrowPeak peaks ENCSR000EFR ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZC3H11A-human ENCAB000AMN DNA see document see document False 2012-08-20 ENCODE 2 ENCFF710NTS, ENCFF996ZXG 4681440 ENCODE Processing Pipeline 1dd1aa8e753206f395d457c2e4a927cc https://www.encodeproject.org/files/ENCFF726OZS/@@download/ENCFF726OZS.bed.gz hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF305IJI bed narrowPeak peaks ENCSR000EFR ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZC3H11A-human ENCAB000AMN DNA see document see document False 2012-08-20 ENCODE 1, 2 ENCFF349TZM, ENCFF710NTS, ENCFF996ZXG 5656691 ENCODE Processing Pipeline 796dc1bfd2a78d8233e18ed7d3b2bbe7 https://www.encodeproject.org/files/ENCFF305IJI/@@download/ENCFF305IJI.bed.gz hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF306KHI bigBed narrowPeak peaks ENCSR000EFR ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZC3H11A-human ENCAB000AMN DNA see document see document False 2012-08-20 ENCODE 1 ENCFF547MRJ 10923671 ENCODE Processing Pipeline e3676389f5b84eaab2e1e1d99c7c52b3 https://www.encodeproject.org/files/ENCFF306KHI/@@download/ENCFF306KHI.bigBed hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF755NYU bigBed narrowPeak peaks ENCSR000EFR ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZC3H11A-human ENCAB000AMN DNA see document see document False 2012-08-20 ENCODE 2 ENCFF726OZS 10808248 ENCODE Processing Pipeline a7866f2160e119a5c460f00327e8fa0c https://www.encodeproject.org/files/ENCFF755NYU/@@download/ENCFF755NYU.bigBed hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF855VYY bigBed narrowPeak conservative idr thresholded peaks ENCSR000EFR ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZC3H11A-human ENCAB000AMN DNA see document see document False 2012-08-20 ENCODE 1, 2 ENCFF804JPD 145206 ENCODE Processing Pipeline 18b40eab35d50c1d3230f42aea368887 https://www.encodeproject.org/files/ENCFF855VYY/@@download/ENCFF855VYY.bigBed hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF800HHN bigWig signal p-value ENCSR000EFR ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZC3H11A-human ENCAB000AMN DNA see document see document False 2012-08-20 ENCODE 1, 2 ENCFF349TZM, ENCFF710NTS, ENCFF996ZXG 552928513 ENCODE Processing Pipeline c85e09ef340524166dd0acc2741933ca https://www.encodeproject.org/files/ENCFF800HHN/@@download/ENCFF800HHN.bigWig hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF015SWG bigBed narrowPeak optimal idr thresholded peaks ENCSR000EFR ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZC3H11A-human ENCAB000AMN DNA see document see document False 2012-08-20 ENCODE 1, 2 ENCFF522JRK 155154 ENCODE Processing Pipeline 17b5c0d0985288707ebb2ef2b30e247b https://www.encodeproject.org/files/ENCFF015SWG/@@download/ENCFF015SWG.bigBed hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF279FUD bigWig signal p-value ENCSR000EFR ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZC3H11A-human ENCAB000AMN DNA see document see document False 2012-08-20 ENCODE 2 ENCFF710NTS, ENCFF996ZXG 473997485 ENCODE Processing Pipeline a62957fab00c1e20113c86054a0f0366 https://www.encodeproject.org/files/ENCFF279FUD/@@download/ENCFF279FUD.bigWig hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF547MRJ bed narrowPeak peaks ENCSR000EFR ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZC3H11A-human ENCAB000AMN DNA see document see document False 2012-08-20 ENCODE 1 ENCFF349TZM, ENCFF710NTS 4633130 ENCODE Processing Pipeline 9577c1e0d4b7c256eb256e79d11f8f85 https://www.encodeproject.org/files/ENCFF547MRJ/@@download/ENCFF547MRJ.bed.gz hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF522JRK bed narrowPeak optimal idr thresholded peaks ENCSR000EFR ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZC3H11A-human ENCAB000AMN DNA see document see document False 2012-08-20 ENCODE 1, 2 ENCFF001TDO, ENCFF305IJI, ENCFF547MRJ, ENCFF726OZS 51017 ENCODE Processing Pipeline 81ec05387a90d3fd3d085fdfd8e8c470 https://www.encodeproject.org/files/ENCFF522JRK/@@download/ENCFF522JRK.bed.gz hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF491JBV bam unfiltered alignments ENCSR750LYM ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NR2C2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 50 ENCFF055TRX, ENCFF243CPL, ENCFF807MUK 2346317818 ENCODE Processing Pipeline 1c0a0686523b31870369124e406b6058 https://www.encodeproject.org/files/ENCFF491JBV/@@download/ENCFF491JBV.bam hg19 released missing genetic modification characterization ENCFF937PVO bam unfiltered alignments ENCSR750LYM ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NR2C2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 50 ENCFF580YPG, ENCFF774QGH, ENCFF807MUK 1944816519 ENCODE Processing Pipeline 38183cb3f3c16b5a9a4a5b6cba39bfcb https://www.encodeproject.org/files/ENCFF937PVO/@@download/ENCFF937PVO.bam hg19 released missing genetic modification characterization ENCFF243CPL fastq reads ENCSR750LYM ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NR2C2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 1 50 single-ended 952116001 Kevin White, UChicago 52eba0e37d58ed84a0c70a699d8cdb33 SRA:SRR6214182 https://www.encodeproject.org/files/ENCFF243CPL/@@download/ENCFF243CPL.fastq.gz Illumina HiSeq 2500 /files/ENCFF459OWK/, /files/ENCFF500SYJ/ released missing genetic modification characterization ENCFF774QGH fastq reads ENCSR750LYM ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NR2C2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 1 50 single-ended 844751312 Kevin White, UChicago 803a25ad9836d6af894df654bcad96ef SRA:SRR6214184 https://www.encodeproject.org/files/ENCFF774QGH/@@download/ENCFF774QGH.fastq.gz Illumina HiSeq 2500 /files/ENCFF459OWK/, /files/ENCFF500SYJ/ released missing genetic modification characterization ENCFF055TRX fastq reads ENCSR750LYM ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NR2C2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 1 50 single-ended 1270830253 Kevin White, UChicago d88d908c4393cf8fcbcb31d821dbb98c SRA:SRR6214183 https://www.encodeproject.org/files/ENCFF055TRX/@@download/ENCFF055TRX.fastq.gz Illumina HiSeq 2000 /files/ENCFF459OWK/, /files/ENCFF500SYJ/ released missing genetic modification characterization ENCFF580YPG fastq reads ENCSR750LYM ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NR2C2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 1 50 single-ended 1040280174 Kevin White, UChicago 7a4d7d6272ef5821fbb02e5c3c7630b1 SRA:SRR6214185 https://www.encodeproject.org/files/ENCFF580YPG/@@download/ENCFF580YPG.fastq.gz Illumina HiSeq 2000 /files/ENCFF459OWK/, /files/ENCFF500SYJ/ released missing genetic modification characterization ENCFF961GDC bam alignments ENCSR750LYM ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NR2C2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 50 ENCFF580YPG, ENCFF774QGH, ENCFF807MUK 1380941915 ENCODE Processing Pipeline 6f628b2585e68ff9f6725e380d525c01 https://www.encodeproject.org/files/ENCFF961GDC/@@download/ENCFF961GDC.bam hg19 released missing genetic modification characterization ENCFF606YNV bam alignments ENCSR750LYM ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NR2C2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 50 ENCFF055TRX, ENCFF243CPL, ENCFF807MUK 1736443460 ENCODE Processing Pipeline 699ada53dca8107d24c3a0a334c6cbfe https://www.encodeproject.org/files/ENCFF606YNV/@@download/ENCFF606YNV.bam hg19 released missing genetic modification characterization ENCFF426FAV bigWig signal p-value ENCSR750LYM ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NR2C2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF129ZZR, ENCFF606YNV 791280499 ENCODE Processing Pipeline eb331c787af21a1080bdf72e1ca0e5f0 https://www.encodeproject.org/files/ENCFF426FAV/@@download/ENCFF426FAV.bigWig hg19 released missing genetic modification characterization ENCFF168XDR bigWig signal p-value ENCSR750LYM ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NR2C2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF129ZZR, ENCFF961GDC 633124189 ENCODE Processing Pipeline 7202d9212b616e7d466b0e589be099c6 https://www.encodeproject.org/files/ENCFF168XDR/@@download/ENCFF168XDR.bigWig hg19 released missing genetic modification characterization ENCFF639AUE bigWig signal p-value ENCSR750LYM ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NR2C2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF129ZZR, ENCFF606YNV, ENCFF961GDC 748620135 ENCODE Processing Pipeline cfcfc51eb4b996d4697e2b34d6717186 https://www.encodeproject.org/files/ENCFF639AUE/@@download/ENCFF639AUE.bigWig hg19 released missing genetic modification characterization ENCFF385OKH bigWig fold change over control ENCSR750LYM ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NR2C2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF129ZZR, ENCFF606YNV 809062372 ENCODE Processing Pipeline dbd3bc30131ea7ac9eeaccfa441b1957 https://www.encodeproject.org/files/ENCFF385OKH/@@download/ENCFF385OKH.bigWig hg19 released missing genetic modification characterization ENCFF255ERO bigWig fold change over control ENCSR750LYM ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NR2C2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF129ZZR, ENCFF961GDC 715835939 ENCODE Processing Pipeline 0d55c6d7cf60122e2c68d3ec7619b240 https://www.encodeproject.org/files/ENCFF255ERO/@@download/ENCFF255ERO.bigWig hg19 released missing genetic modification characterization ENCFF657ZPH bigWig fold change over control ENCSR750LYM ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NR2C2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF129ZZR, ENCFF606YNV, ENCFF961GDC 1103197753 ENCODE Processing Pipeline 1798f7dce049a9fa9f809708d3c9db58 https://www.encodeproject.org/files/ENCFF657ZPH/@@download/ENCFF657ZPH.bigWig hg19 released missing genetic modification characterization ENCFF610XAF bed narrowPeak peaks ENCSR750LYM ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NR2C2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF129ZZR, ENCFF606YNV 7171179 ENCODE Processing Pipeline 6999350ac335a593e5c0587ad900d047 https://www.encodeproject.org/files/ENCFF610XAF/@@download/ENCFF610XAF.bed.gz hg19 released missing genetic modification characterization ENCFF799LYO bigBed narrowPeak peaks ENCSR750LYM ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NR2C2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF610XAF 12548033 ENCODE Processing Pipeline c0d9d7d04bd3afa2416a3295d8ff2641 https://www.encodeproject.org/files/ENCFF799LYO/@@download/ENCFF799LYO.bigBed hg19 released missing genetic modification characterization ENCFF374WLL bed narrowPeak peaks ENCSR750LYM ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NR2C2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF129ZZR, ENCFF961GDC 7054215 ENCODE Processing Pipeline 967f0bbb6d85e93bba5900e6ed6d2cf1 https://www.encodeproject.org/files/ENCFF374WLL/@@download/ENCFF374WLL.bed.gz hg19 released missing genetic modification characterization ENCFF994BAN bed narrowPeak peaks ENCSR750LYM ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NR2C2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF129ZZR, ENCFF606YNV, ENCFF961GDC 7292790 ENCODE Processing Pipeline d715dcfd343638c0f4875ad654690277 https://www.encodeproject.org/files/ENCFF994BAN/@@download/ENCFF994BAN.bed.gz hg19 released missing genetic modification characterization ENCFF595QJE bigBed narrowPeak peaks ENCSR750LYM ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NR2C2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF374WLL 12298841 ENCODE Processing Pipeline 13f8a3671d635578ce458abbd76d6449 https://www.encodeproject.org/files/ENCFF595QJE/@@download/ENCFF595QJE.bigBed hg19 released missing genetic modification characterization ENCFF981NYR bigBed narrowPeak peaks ENCSR750LYM ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NR2C2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF994BAN 12428047 ENCODE Processing Pipeline 98e0ad54509e57dc43d02e974e4b0ac0 https://www.encodeproject.org/files/ENCFF981NYR/@@download/ENCFF981NYR.bigBed hg19 released missing genetic modification characterization ENCFF504GNL bam unfiltered alignments ENCSR750LYM ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NR2C2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 50 ENCFF580YPG, ENCFF643CGH, ENCFF774QGH 1951446046 ENCODE Processing Pipeline 98380b7ef242b78e73fa05feb209e4a9 https://www.encodeproject.org/files/ENCFF504GNL/@@download/ENCFF504GNL.bam GRCh38 released missing genetic modification characterization ENCFF264TNB bam unfiltered alignments ENCSR750LYM ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NR2C2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 50 ENCFF055TRX, ENCFF243CPL, ENCFF643CGH 2353756866 ENCODE Processing Pipeline d32dd623fbeccb06e331d037b85ff54e https://www.encodeproject.org/files/ENCFF264TNB/@@download/ENCFF264TNB.bam GRCh38 released missing genetic modification characterization ENCFF597WPX bam alignments ENCSR750LYM ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NR2C2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 50 ENCFF580YPG, ENCFF643CGH, ENCFF774QGH 1380204496 ENCODE Processing Pipeline bf4104c87586ed05858471be4bd6fbdf https://www.encodeproject.org/files/ENCFF597WPX/@@download/ENCFF597WPX.bam GRCh38 released missing genetic modification characterization ENCFF856EXS bam alignments ENCSR750LYM ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NR2C2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 50 ENCFF055TRX, ENCFF243CPL, ENCFF643CGH 1735659003 ENCODE Processing Pipeline 80e5d095cbf4624e065f7c1553b9b1c3 https://www.encodeproject.org/files/ENCFF856EXS/@@download/ENCFF856EXS.bam GRCh38 released missing genetic modification characterization ENCFF926SQK bigWig signal p-value ENCSR750LYM ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NR2C2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF699KKU, ENCFF856EXS 792859971 ENCODE Processing Pipeline 658f2e7ebbfc3e9179e39dd262ba6c82 https://www.encodeproject.org/files/ENCFF926SQK/@@download/ENCFF926SQK.bigWig GRCh38 released missing genetic modification characterization ENCFF159LQW bigWig signal p-value ENCSR750LYM ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NR2C2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF597WPX, ENCFF699KKU 630801811 ENCODE Processing Pipeline 77f97f8cf7baa95a20ac2a5e64f16f2d https://www.encodeproject.org/files/ENCFF159LQW/@@download/ENCFF159LQW.bigWig GRCh38 released missing genetic modification characterization ENCFF148YUY bigWig signal p-value ENCSR750LYM ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NR2C2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF597WPX, ENCFF699KKU, ENCFF856EXS 762691604 ENCODE Processing Pipeline 595f8f028c95690fdf042922b6fca169 https://www.encodeproject.org/files/ENCFF148YUY/@@download/ENCFF148YUY.bigWig GRCh38 released missing genetic modification characterization ENCFF389LRA bigWig fold change over control ENCSR750LYM ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NR2C2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF699KKU, ENCFF856EXS 810694908 ENCODE Processing Pipeline bc8083eef2db8fd4f120311f272e1fc7 https://www.encodeproject.org/files/ENCFF389LRA/@@download/ENCFF389LRA.bigWig GRCh38 released missing genetic modification characterization ENCFF674IUP bigWig fold change over control ENCSR750LYM ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NR2C2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF597WPX, ENCFF699KKU 707109139 ENCODE Processing Pipeline 81eb03e202caf7223c2021002e8d6936 https://www.encodeproject.org/files/ENCFF674IUP/@@download/ENCFF674IUP.bigWig GRCh38 released missing genetic modification characterization ENCFF513ULH bigWig fold change over control ENCSR750LYM ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NR2C2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF597WPX, ENCFF699KKU, ENCFF856EXS 1119740216 ENCODE Processing Pipeline a752bbdffa19c45968f32fb3f7e97075 https://www.encodeproject.org/files/ENCFF513ULH/@@download/ENCFF513ULH.bigWig GRCh38 released missing genetic modification characterization ENCFF503GGD bed narrowPeak peaks ENCSR750LYM ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NR2C2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF597WPX, ENCFF699KKU, ENCFF856EXS 7277012 ENCODE Processing Pipeline 814af0b566ca8c0167511a44b72b4b01 https://www.encodeproject.org/files/ENCFF503GGD/@@download/ENCFF503GGD.bed.gz GRCh38 released missing genetic modification characterization ENCFF741ZBS bed narrowPeak peaks ENCSR750LYM ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NR2C2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF699KKU, ENCFF856EXS 7089362 ENCODE Processing Pipeline 760c81a25c5058c1e7be71b39d5673de https://www.encodeproject.org/files/ENCFF741ZBS/@@download/ENCFF741ZBS.bed.gz GRCh38 released missing genetic modification characterization ENCFF749UHD bed narrowPeak peaks ENCSR750LYM ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NR2C2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF597WPX, ENCFF699KKU 6984469 ENCODE Processing Pipeline c702826f7689819915155aa2899f8b76 https://www.encodeproject.org/files/ENCFF749UHD/@@download/ENCFF749UHD.bed.gz GRCh38 released missing genetic modification characterization ENCFF242YQW bigBed narrowPeak peaks ENCSR750LYM ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NR2C2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF741ZBS 12536643 ENCODE Processing Pipeline 3ebcb704d85b734ef6a078dbf53815aa https://www.encodeproject.org/files/ENCFF242YQW/@@download/ENCFF242YQW.bigBed GRCh38 released missing genetic modification characterization ENCFF284LYU bed narrowPeak conservative idr thresholded peaks ENCSR750LYM ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NR2C2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF419RSJ, ENCFF503GGD, ENCFF741ZBS, ENCFF749UHD 670953 ENCODE Processing Pipeline dc744c53c76c7e3a9be9f2a76b9851d3 https://www.encodeproject.org/files/ENCFF284LYU/@@download/ENCFF284LYU.bed.gz GRCh38 released missing genetic modification characterization ENCFF014QUJ bigBed narrowPeak peaks ENCSR750LYM ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NR2C2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF749UHD 12306140 ENCODE Processing Pipeline fd773987353a63ada89911475502ad82 https://www.encodeproject.org/files/ENCFF014QUJ/@@download/ENCFF014QUJ.bigBed GRCh38 released missing genetic modification characterization ENCFF789AXP bed narrowPeak optimal idr thresholded peaks ENCSR750LYM ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NR2C2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF419RSJ, ENCFF503GGD, ENCFF741ZBS, ENCFF749UHD 816401 ENCODE Processing Pipeline a28872ad6becf37b3551dfc454e2ae70 https://www.encodeproject.org/files/ENCFF789AXP/@@download/ENCFF789AXP.bed.gz GRCh38 released missing genetic modification characterization ENCFF761COX bigBed narrowPeak peaks ENCSR750LYM ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NR2C2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF503GGD 12439979 ENCODE Processing Pipeline 4826008d1450903368d602f0f3f0b3a2 https://www.encodeproject.org/files/ENCFF761COX/@@download/ENCFF761COX.bigBed GRCh38 released missing genetic modification characterization ENCFF273LYV bigBed narrowPeak conservative idr thresholded peaks ENCSR750LYM ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NR2C2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF284LYU 1551073 ENCODE Processing Pipeline 68dc9e192fb441489cddb6126f6be676 https://www.encodeproject.org/files/ENCFF273LYV/@@download/ENCFF273LYV.bigBed GRCh38 released missing genetic modification characterization ENCFF105SII bigBed narrowPeak optimal idr thresholded peaks ENCSR750LYM ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NR2C2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF789AXP 1847217 ENCODE Processing Pipeline 9d428820fc1439e95e5f3878db9b8721 https://www.encodeproject.org/files/ENCFF105SII/@@download/ENCFF105SII.bigBed GRCh38 released missing genetic modification characterization ENCFF978GHB bed narrowPeak conservative idr thresholded peaks ENCSR750LYM ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NR2C2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF001TDO, ENCFF374WLL, ENCFF610XAF, ENCFF994BAN 581418 ENCODE Processing Pipeline c21f4e72839e1631cf4753dbcd32d199 https://www.encodeproject.org/files/ENCFF978GHB/@@download/ENCFF978GHB.bed.gz hg19 released missing genetic modification characterization ENCFF338CYI bigBed narrowPeak optimal idr thresholded peaks ENCSR750LYM ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NR2C2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF254YOX 1373613 ENCODE Processing Pipeline ca516aa5ab25e140f5995ee8829a323a https://www.encodeproject.org/files/ENCFF338CYI/@@download/ENCFF338CYI.bigBed hg19 released missing genetic modification characterization ENCFF254YOX bed narrowPeak optimal idr thresholded peaks ENCSR750LYM ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NR2C2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF001TDO, ENCFF374WLL, ENCFF610XAF, ENCFF994BAN 707639 ENCODE Processing Pipeline f34791c66a2d02e2f42717a679cb9573 https://www.encodeproject.org/files/ENCFF254YOX/@@download/ENCFF254YOX.bed.gz hg19 released missing genetic modification characterization ENCFF053TNU bigBed narrowPeak conservative idr thresholded peaks ENCSR750LYM ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NR2C2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF978GHB 1166980 ENCODE Processing Pipeline 4114c557bc653c942f4bb0cd37c0706e https://www.encodeproject.org/files/ENCFF053TNU/@@download/ENCFF053TNU.bigBed hg19 released missing genetic modification characterization ENCFF700NJD bam unfiltered alignments ENCSR797SWM ChIP-seq EFO:0002067 K562 cell line Homo sapiens MITF-human ENCAB681JHP DNA False 2018-01-26 ENCODE 4 100 ENCFF029JZY, ENCFF455XVE, ENCFF807MUK 4798515578 ENCODE Processing Pipeline 19ca1255aac36de3db19c6b28ed2a841 https://www.encodeproject.org/files/ENCFF700NJD/@@download/ENCFF700NJD.bam hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF698JSA bam unfiltered alignments ENCSR797SWM ChIP-seq EFO:0002067 K562 cell line Homo sapiens MITF-human ENCAB681JHP DNA False 2018-01-26 ENCODE 3 100 ENCFF018YWZ, ENCFF220PBO, ENCFF807MUK 5146797841 ENCODE Processing Pipeline 11e866f6259115e713afb27a6c0dc1ba https://www.encodeproject.org/files/ENCFF698JSA/@@download/ENCFF698JSA.bam hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF455XVE fastq reads ENCSR797SWM ChIP-seq EFO:0002067 K562 cell line Homo sapiens MITF-human ENCAB681JHP DNA False 2018-01-26 ENCODE 4 1 100 paired-ended 1 ENCFF029JZY 2261386726 Michael Snyder, Stanford 577d7534525432120dc7a38d5b29b351 https://www.encodeproject.org/files/ENCFF455XVE/@@download/ENCFF455XVE.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFD/ released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF220PBO fastq reads ENCSR797SWM ChIP-seq EFO:0002067 K562 cell line Homo sapiens MITF-human ENCAB681JHP DNA False 2018-01-26 ENCODE 3 1 100 paired-ended 1 ENCFF018YWZ 2391364944 Michael Snyder, Stanford c15cb29a452df29c812b8fa3532174c5 https://www.encodeproject.org/files/ENCFF220PBO/@@download/ENCFF220PBO.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFF/ released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF018YWZ fastq reads ENCSR797SWM ChIP-seq EFO:0002067 K562 cell line Homo sapiens MITF-human ENCAB681JHP DNA False 2018-01-26 ENCODE 3 1 100 paired-ended 2 ENCFF220PBO 2403435875 Michael Snyder, Stanford 9b98c477b52c56527bb791f57a7142eb https://www.encodeproject.org/files/ENCFF018YWZ/@@download/ENCFF018YWZ.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFH/ released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF029JZY fastq reads ENCSR797SWM ChIP-seq EFO:0002067 K562 cell line Homo sapiens MITF-human ENCAB681JHP DNA False 2018-01-26 ENCODE 4 1 100 paired-ended 2 ENCFF455XVE 2288990672 Michael Snyder, Stanford e77b68a81149c535b7cace00e39ef64e https://www.encodeproject.org/files/ENCFF029JZY/@@download/ENCFF029JZY.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFA/ released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF365ZKI bam alignments ENCSR797SWM ChIP-seq EFO:0002067 K562 cell line Homo sapiens MITF-human ENCAB681JHP DNA False 2018-01-26 ENCODE 3 100 ENCFF018YWZ, ENCFF220PBO, ENCFF807MUK 4156629063 ENCODE Processing Pipeline 115500dbaa6538a2fccb60a6afba957b https://www.encodeproject.org/files/ENCFF365ZKI/@@download/ENCFF365ZKI.bam hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF670CVM bam alignments ENCSR797SWM ChIP-seq EFO:0002067 K562 cell line Homo sapiens MITF-human ENCAB681JHP DNA False 2018-01-26 ENCODE 4 100 ENCFF029JZY, ENCFF455XVE, ENCFF807MUK 3496711699 ENCODE Processing Pipeline 356f37452b0c8ea2e209e4c12e4a81ea https://www.encodeproject.org/files/ENCFF670CVM/@@download/ENCFF670CVM.bam hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF052SIA bigWig signal p-value ENCSR797SWM ChIP-seq EFO:0002067 K562 cell line Homo sapiens MITF-human ENCAB681JHP DNA False 2018-01-26 ENCODE 3 ENCFF365ZKI, ENCFF581ZJL 1261581501 ENCODE Processing Pipeline 9e0babc9354eb0d8492643f82af70e7f https://www.encodeproject.org/files/ENCFF052SIA/@@download/ENCFF052SIA.bigWig hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF123QPG bigWig signal p-value ENCSR797SWM ChIP-seq EFO:0002067 K562 cell line Homo sapiens MITF-human ENCAB681JHP DNA False 2018-01-26 ENCODE 4 ENCFF051LWI, ENCFF670CVM 1105193752 ENCODE Processing Pipeline b7ab3ef0070ca465ff7a5a4c3ea8cb80 https://www.encodeproject.org/files/ENCFF123QPG/@@download/ENCFF123QPG.bigWig hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF248FCU bigWig signal p-value ENCSR797SWM ChIP-seq EFO:0002067 K562 cell line Homo sapiens MITF-human ENCAB681JHP DNA False 2018-01-26 ENCODE 3, 4 ENCFF051LWI, ENCFF365ZKI, ENCFF581ZJL, ENCFF670CVM 1919392288 ENCODE Processing Pipeline 5ea712babe4d69f7b524fefa6b7d5c6e https://www.encodeproject.org/files/ENCFF248FCU/@@download/ENCFF248FCU.bigWig hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF597NFW bigWig fold change over control ENCSR797SWM ChIP-seq EFO:0002067 K562 cell line Homo sapiens MITF-human ENCAB681JHP DNA False 2018-01-26 ENCODE 3 ENCFF365ZKI, ENCFF581ZJL 1142388003 ENCODE Processing Pipeline 17876ec36ee116508f3711b989d1b7aa https://www.encodeproject.org/files/ENCFF597NFW/@@download/ENCFF597NFW.bigWig hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF025KUF bigWig fold change over control ENCSR797SWM ChIP-seq EFO:0002067 K562 cell line Homo sapiens MITF-human ENCAB681JHP DNA False 2018-01-26 ENCODE 4 ENCFF051LWI, ENCFF670CVM 1004449582 ENCODE Processing Pipeline bb0ce837b33daa967f56c5faa759359e https://www.encodeproject.org/files/ENCFF025KUF/@@download/ENCFF025KUF.bigWig hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF652VBD bed narrowPeak peaks ENCSR797SWM ChIP-seq EFO:0002067 K562 cell line Homo sapiens MITF-human ENCAB681JHP DNA False 2018-01-26 ENCODE 3, 4 ENCFF051LWI, ENCFF365ZKI, ENCFF581ZJL, ENCFF670CVM 7215542 ENCODE Processing Pipeline c890bbbbef855799f00e8a3d6f15464f https://www.encodeproject.org/files/ENCFF652VBD/@@download/ENCFF652VBD.bed.gz hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF931TIP bigBed narrowPeak peaks ENCSR797SWM ChIP-seq EFO:0002067 K562 cell line Homo sapiens MITF-human ENCAB681JHP DNA False 2018-01-26 ENCODE 3, 4 ENCFF652VBD 13574141 ENCODE Processing Pipeline d8c818297fc6c92bbce4eb0a758fe057 https://www.encodeproject.org/files/ENCFF931TIP/@@download/ENCFF931TIP.bigBed hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF935XHX bigWig fold change over control ENCSR797SWM ChIP-seq EFO:0002067 K562 cell line Homo sapiens MITF-human ENCAB681JHP DNA False 2018-01-26 ENCODE 3, 4 ENCFF051LWI, ENCFF365ZKI, ENCFF581ZJL, ENCFF670CVM 1997459496 ENCODE Processing Pipeline a78e37e2c7ee07576c7e8c969e4262a2 https://www.encodeproject.org/files/ENCFF935XHX/@@download/ENCFF935XHX.bigWig hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF420EZA bed narrowPeak peaks ENCSR797SWM ChIP-seq EFO:0002067 K562 cell line Homo sapiens MITF-human ENCAB681JHP DNA False 2018-01-26 ENCODE 4 ENCFF051LWI, ENCFF670CVM 6776679 ENCODE Processing Pipeline fac5621ffb5d3033a828fd2b721573b0 https://www.encodeproject.org/files/ENCFF420EZA/@@download/ENCFF420EZA.bed.gz hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF958FGE bed narrowPeak peaks ENCSR797SWM ChIP-seq EFO:0002067 K562 cell line Homo sapiens MITF-human ENCAB681JHP DNA False 2018-01-26 ENCODE 3 ENCFF365ZKI, ENCFF581ZJL 6801009 ENCODE Processing Pipeline 30f37a2484cc13307fd55e8a60edfd34 https://www.encodeproject.org/files/ENCFF958FGE/@@download/ENCFF958FGE.bed.gz hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF749XFI bigBed narrowPeak peaks ENCSR797SWM ChIP-seq EFO:0002067 K562 cell line Homo sapiens MITF-human ENCAB681JHP DNA False 2018-01-26 ENCODE 3 ENCFF958FGE 13488622 ENCODE Processing Pipeline 5027d2e79d3bf7828f44a523e6322e3f https://www.encodeproject.org/files/ENCFF749XFI/@@download/ENCFF749XFI.bigBed hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF815INM bigBed narrowPeak peaks ENCSR797SWM ChIP-seq EFO:0002067 K562 cell line Homo sapiens MITF-human ENCAB681JHP DNA False 2018-01-26 ENCODE 4 ENCFF420EZA 13579974 ENCODE Processing Pipeline 2abe2a0e6ade9cfb0d04dc48078ff588 https://www.encodeproject.org/files/ENCFF815INM/@@download/ENCFF815INM.bigBed hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF627TMJ bam unfiltered alignments ENCSR797SWM ChIP-seq EFO:0002067 K562 cell line Homo sapiens MITF-human ENCAB681JHP DNA False 2018-01-26 ENCODE 4 100 ENCFF029JZY, ENCFF455XVE, ENCFF643CGH 4801155707 ENCODE Processing Pipeline 7cb77c28d5394163995e6b9804a301f9 https://www.encodeproject.org/files/ENCFF627TMJ/@@download/ENCFF627TMJ.bam GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF523DTE bam unfiltered alignments ENCSR797SWM ChIP-seq EFO:0002067 K562 cell line Homo sapiens MITF-human ENCAB681JHP DNA False 2018-01-26 ENCODE 3 100 ENCFF018YWZ, ENCFF220PBO, ENCFF643CGH 5151018091 ENCODE Processing Pipeline c2ec8fcc65f69f6d5770e25f587c7a60 https://www.encodeproject.org/files/ENCFF523DTE/@@download/ENCFF523DTE.bam GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF778KCK bam alignments ENCSR797SWM ChIP-seq EFO:0002067 K562 cell line Homo sapiens MITF-human ENCAB681JHP DNA False 2018-01-26 ENCODE 4 100 ENCFF029JZY, ENCFF455XVE, ENCFF643CGH 3498011102 ENCODE Processing Pipeline aa08eeacd3bac6e32d02a96601bb6a2c https://www.encodeproject.org/files/ENCFF778KCK/@@download/ENCFF778KCK.bam GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF462VNN bam alignments ENCSR797SWM ChIP-seq EFO:0002067 K562 cell line Homo sapiens MITF-human ENCAB681JHP DNA False 2018-01-26 ENCODE 3 100 ENCFF018YWZ, ENCFF220PBO, ENCFF643CGH 4158571398 ENCODE Processing Pipeline e4138e68d5823438f0cbbf94580ad865 https://www.encodeproject.org/files/ENCFF462VNN/@@download/ENCFF462VNN.bam GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF539XVT bigWig signal p-value ENCSR797SWM ChIP-seq EFO:0002067 K562 cell line Homo sapiens MITF-human ENCAB681JHP DNA False 2018-01-26 ENCODE 3 ENCFF462VNN, ENCFF910IKB 1174101732 ENCODE Processing Pipeline ddadfdde99c3d7ae0770ac5b880ca4f1 https://www.encodeproject.org/files/ENCFF539XVT/@@download/ENCFF539XVT.bigWig GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF183CKB bigWig signal p-value ENCSR797SWM ChIP-seq EFO:0002067 K562 cell line Homo sapiens MITF-human ENCAB681JHP DNA False 2018-01-26 ENCODE 4 ENCFF227IZS, ENCFF778KCK 1079747291 ENCODE Processing Pipeline f8e7138d433817ae0465298418e839df https://www.encodeproject.org/files/ENCFF183CKB/@@download/ENCFF183CKB.bigWig GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF165RDJ bigWig signal p-value ENCSR797SWM ChIP-seq EFO:0002067 K562 cell line Homo sapiens MITF-human ENCAB681JHP DNA False 2018-01-26 ENCODE 3, 4 ENCFF227IZS, ENCFF462VNN, ENCFF778KCK, ENCFF910IKB 1928563463 ENCODE Processing Pipeline 7a71379ad861a8cbe6254826f2975772 https://www.encodeproject.org/files/ENCFF165RDJ/@@download/ENCFF165RDJ.bigWig GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF550DZF bigWig fold change over control ENCSR797SWM ChIP-seq EFO:0002067 K562 cell line Homo sapiens MITF-human ENCAB681JHP DNA False 2018-01-26 ENCODE 3 ENCFF462VNN, ENCFF910IKB 1146375495 ENCODE Processing Pipeline 341f231a63931eff99372fc2b2b2c595 https://www.encodeproject.org/files/ENCFF550DZF/@@download/ENCFF550DZF.bigWig GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF391FON bigWig fold change over control ENCSR797SWM ChIP-seq EFO:0002067 K562 cell line Homo sapiens MITF-human ENCAB681JHP DNA False 2018-01-26 ENCODE 4 ENCFF227IZS, ENCFF778KCK 987483566 ENCODE Processing Pipeline 56276678377244707d185a7e376664b4 https://www.encodeproject.org/files/ENCFF391FON/@@download/ENCFF391FON.bigWig GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF808IWR bigWig fold change over control ENCSR797SWM ChIP-seq EFO:0002067 K562 cell line Homo sapiens MITF-human ENCAB681JHP DNA False 2018-01-26 ENCODE 3, 4 ENCFF227IZS, ENCFF462VNN, ENCFF778KCK, ENCFF910IKB 1998624852 ENCODE Processing Pipeline 640ea8e2d306d80ea990c81a6c116938 https://www.encodeproject.org/files/ENCFF808IWR/@@download/ENCFF808IWR.bigWig GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF459VCL bed narrowPeak peaks ENCSR797SWM ChIP-seq EFO:0002067 K562 cell line Homo sapiens MITF-human ENCAB681JHP DNA False 2018-01-26 ENCODE 3 ENCFF462VNN, ENCFF910IKB 6683163 ENCODE Processing Pipeline 94f4d8663fc334081461f05115fe493e https://www.encodeproject.org/files/ENCFF459VCL/@@download/ENCFF459VCL.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF293MMH bed narrowPeak peaks ENCSR797SWM ChIP-seq EFO:0002067 K562 cell line Homo sapiens MITF-human ENCAB681JHP DNA False 2018-01-26 ENCODE 4 ENCFF227IZS, ENCFF778KCK 6647929 ENCODE Processing Pipeline 1343e1537c42da0b886f616cb5177533 https://www.encodeproject.org/files/ENCFF293MMH/@@download/ENCFF293MMH.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF499VLE bed narrowPeak peaks ENCSR797SWM ChIP-seq EFO:0002067 K562 cell line Homo sapiens MITF-human ENCAB681JHP DNA False 2018-01-26 ENCODE 3, 4 ENCFF227IZS, ENCFF462VNN, ENCFF778KCK, ENCFF910IKB 7184686 ENCODE Processing Pipeline 9b2ef373f831ce59ce17d6324c3e4442 https://www.encodeproject.org/files/ENCFF499VLE/@@download/ENCFF499VLE.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF133CJA bigBed narrowPeak peaks ENCSR797SWM ChIP-seq EFO:0002067 K562 cell line Homo sapiens MITF-human ENCAB681JHP DNA False 2018-01-26 ENCODE 3 ENCFF459VCL 13484648 ENCODE Processing Pipeline bec1bb7df20df56313a1a213cea447f6 https://www.encodeproject.org/files/ENCFF133CJA/@@download/ENCFF133CJA.bigBed GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF790SBB bigBed narrowPeak peaks ENCSR797SWM ChIP-seq EFO:0002067 K562 cell line Homo sapiens MITF-human ENCAB681JHP DNA False 2018-01-26 ENCODE 4 ENCFF293MMH 13575328 ENCODE Processing Pipeline ab43c578b49707fef5e7a4d3737f9e0e https://www.encodeproject.org/files/ENCFF790SBB/@@download/ENCFF790SBB.bigBed GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF898DCS bigBed narrowPeak peaks ENCSR797SWM ChIP-seq EFO:0002067 K562 cell line Homo sapiens MITF-human ENCAB681JHP DNA False 2018-01-26 ENCODE 3, 4 ENCFF499VLE 13561731 ENCODE Processing Pipeline ab83b262fe112b8cf986fe57c35515c3 https://www.encodeproject.org/files/ENCFF898DCS/@@download/ENCFF898DCS.bigBed GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF105CED bed narrowPeak conservative idr thresholded peaks ENCSR797SWM ChIP-seq EFO:0002067 K562 cell line Homo sapiens MITF-human ENCAB681JHP DNA False 2018-01-26 ENCODE 3, 4 ENCFF293MMH, ENCFF419RSJ, ENCFF459VCL, ENCFF499VLE 488079 ENCODE Processing Pipeline 93a089b15e99c1d90251125cefde18f1 https://www.encodeproject.org/files/ENCFF105CED/@@download/ENCFF105CED.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF662AIM bigBed narrowPeak conservative idr thresholded peaks ENCSR797SWM ChIP-seq EFO:0002067 K562 cell line Homo sapiens MITF-human ENCAB681JHP DNA False 2018-01-26 ENCODE 3, 4 ENCFF105CED 882358 ENCODE Processing Pipeline a3f8a0f804bdaf2f278ca8a0075f6bd3 https://www.encodeproject.org/files/ENCFF662AIM/@@download/ENCFF662AIM.bigBed GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF262TMM bed narrowPeak optimal idr thresholded peaks ENCSR797SWM ChIP-seq EFO:0002067 K562 cell line Homo sapiens MITF-human ENCAB681JHP DNA False 2018-01-26 ENCODE 3, 4 ENCFF293MMH, ENCFF419RSJ, ENCFF459VCL, ENCFF499VLE 610545 ENCODE Processing Pipeline d3dc06dc43c2790d9347623732a23475 https://www.encodeproject.org/files/ENCFF262TMM/@@download/ENCFF262TMM.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF706NTF bigBed narrowPeak optimal idr thresholded peaks ENCSR797SWM ChIP-seq EFO:0002067 K562 cell line Homo sapiens MITF-human ENCAB681JHP DNA False 2018-01-26 ENCODE 3, 4 ENCFF262TMM 1044701 ENCODE Processing Pipeline c928a1b5c7e1b30a1da6b5a15111ac19 https://www.encodeproject.org/files/ENCFF706NTF/@@download/ENCFF706NTF.bigBed GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF885PUG bigBed narrowPeak conservative idr thresholded peaks ENCSR797SWM ChIP-seq EFO:0002067 K562 cell line Homo sapiens MITF-human ENCAB681JHP DNA False 2018-01-26 ENCODE 3, 4 ENCFF724TVS 803263 ENCODE Processing Pipeline 7087ebde233ee9779dddd310e599b797 https://www.encodeproject.org/files/ENCFF885PUG/@@download/ENCFF885PUG.bigBed hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF724TVS bed narrowPeak conservative idr thresholded peaks ENCSR797SWM ChIP-seq EFO:0002067 K562 cell line Homo sapiens MITF-human ENCAB681JHP DNA False 2018-01-26 ENCODE 3, 4 ENCFF001TDO, ENCFF420EZA, ENCFF652VBD, ENCFF958FGE 436659 ENCODE Processing Pipeline 278372172d93f2b73eb787113b8e58f8 https://www.encodeproject.org/files/ENCFF724TVS/@@download/ENCFF724TVS.bed.gz hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF534CPL bigBed narrowPeak optimal idr thresholded peaks ENCSR797SWM ChIP-seq EFO:0002067 K562 cell line Homo sapiens MITF-human ENCAB681JHP DNA False 2018-01-26 ENCODE 3, 4 ENCFF497XOD 937450 ENCODE Processing Pipeline 6bbb95aea195152dab8c94c4886c26d3 https://www.encodeproject.org/files/ENCFF534CPL/@@download/ENCFF534CPL.bigBed hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF497XOD bed narrowPeak optimal idr thresholded peaks ENCSR797SWM ChIP-seq EFO:0002067 K562 cell line Homo sapiens MITF-human ENCAB681JHP DNA False 2018-01-26 ENCODE 3, 4 ENCFF001TDO, ENCFF420EZA, ENCFF652VBD, ENCFF958FGE 543857 ENCODE Processing Pipeline 0ee41a02ba74c38f647572359038656e https://www.encodeproject.org/files/ENCFF497XOD/@@download/ENCFF497XOD.bed.gz hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF240XVG bam unfiltered alignments ENCSR117WTM ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF24-human ENCAB728YTO DNA False 2016-03-02 ENCODE 2 100 ENCFF615CRG, ENCFF718HUU, ENCFF807MUK 4265592793 ENCODE Processing Pipeline 7ff5500974cbc3441ed2ff2dbf43ee8f https://www.encodeproject.org/files/ENCFF240XVG/@@download/ENCFF240XVG.bam hg19 released low read depth, missing genetic modification characterization ENCFF679LJM bam unfiltered alignments ENCSR117WTM ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF24-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1 100 ENCFF157JAL, ENCFF807MUK, ENCFF977AJQ 4233991659 ENCODE Processing Pipeline 1576f65f81e890855d1544892e465f90 https://www.encodeproject.org/files/ENCFF679LJM/@@download/ENCFF679LJM.bam hg19 released low read depth, missing genetic modification characterization ENCFF157JAL fastq reads ENCSR117WTM ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF24-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1 1 100 paired-ended 2 ENCFF977AJQ 1930667486 Michael Snyder, Stanford b1d58db82a0bba168e6f238a9e7ea365 SRA:SRR5111134 https://www.encodeproject.org/files/ENCFF157JAL/@@download/ENCFF157JAL.fastq.gz Illumina HiSeq 2000 /files/ENCFF746XJG/ released low read depth, missing genetic modification characterization ENCFF718HUU fastq reads ENCSR117WTM ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF24-human ENCAB728YTO DNA False 2016-03-02 ENCODE 2 1 100 paired-ended 1 ENCFF615CRG 1786772171 Michael Snyder, Stanford 752e737305f19b2879bffd1bcc10087c SRA:SRR5111133 https://www.encodeproject.org/files/ENCFF718HUU/@@download/ENCFF718HUU.fastq.gz Illumina HiSeq 2000 /files/ENCFF338LYQ/ released low read depth, missing genetic modification characterization ENCFF615CRG fastq reads ENCSR117WTM ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF24-human ENCAB728YTO DNA False 2016-03-02 ENCODE 2 1 100 paired-ended 2 ENCFF718HUU 1899709605 Michael Snyder, Stanford 10079ff5c9f5ce1a12f1d8729db1f18c SRA:SRR5111133 https://www.encodeproject.org/files/ENCFF615CRG/@@download/ENCFF615CRG.fastq.gz Illumina HiSeq 2000 /files/ENCFF746XJG/ released low read depth, missing genetic modification characterization ENCFF977AJQ fastq reads ENCSR117WTM ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF24-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1 1 100 paired-ended 1 ENCFF157JAL 1847320328 Michael Snyder, Stanford c7fbb69322bbfbc3ad2f9b2df86fe08e SRA:SRR5111134 https://www.encodeproject.org/files/ENCFF977AJQ/@@download/ENCFF977AJQ.fastq.gz Illumina HiSeq 2000 /files/ENCFF338LYQ/ released low read depth, missing genetic modification characterization ENCFF807NZJ bam alignments ENCSR117WTM ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF24-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1 100 ENCFF157JAL, ENCFF807MUK, ENCFF977AJQ 3535194946 ENCODE Processing Pipeline 63c19dfad9fabfb625c53ea0c780e26a https://www.encodeproject.org/files/ENCFF807NZJ/@@download/ENCFF807NZJ.bam hg19 released low read depth, missing genetic modification characterization ENCFF767NHP bam alignments ENCSR117WTM ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF24-human ENCAB728YTO DNA False 2016-03-02 ENCODE 2 100 ENCFF615CRG, ENCFF718HUU, ENCFF807MUK 3200739042 ENCODE Processing Pipeline 7eb61a8981023c5a4e6d871e4bac8964 https://www.encodeproject.org/files/ENCFF767NHP/@@download/ENCFF767NHP.bam hg19 released low read depth, missing genetic modification characterization ENCFF833RIU bigWig signal p-value ENCSR117WTM ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF24-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1 ENCFF099DHX, ENCFF807NZJ 917546953 ENCODE Processing Pipeline cecfb9f75b4959e7be7d37f789e5ccbd https://www.encodeproject.org/files/ENCFF833RIU/@@download/ENCFF833RIU.bigWig hg19 released low read depth, missing genetic modification characterization ENCFF234PPM bigWig signal p-value ENCSR117WTM ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF24-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF099DHX, ENCFF767NHP, ENCFF807NZJ 1090797515 ENCODE Processing Pipeline bc8cb233bc66c5bc78427a53d954be41 https://www.encodeproject.org/files/ENCFF234PPM/@@download/ENCFF234PPM.bigWig hg19 released low read depth, missing genetic modification characterization ENCFF432FMT bigWig signal p-value ENCSR117WTM ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF24-human ENCAB728YTO DNA False 2016-03-02 ENCODE 2 ENCFF099DHX, ENCFF767NHP 749623839 ENCODE Processing Pipeline b8ae30755b6571d43f4bdae5a9bb53c0 https://www.encodeproject.org/files/ENCFF432FMT/@@download/ENCFF432FMT.bigWig hg19 released low read depth, missing genetic modification characterization ENCFF830YTF bigWig fold change over control ENCSR117WTM ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF24-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1 ENCFF099DHX, ENCFF807NZJ 907517047 ENCODE Processing Pipeline 6325535bf1211fbb11172f28a2728aae https://www.encodeproject.org/files/ENCFF830YTF/@@download/ENCFF830YTF.bigWig hg19 released low read depth, missing genetic modification characterization ENCFF154UHN bigWig fold change over control ENCSR117WTM ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF24-human ENCAB728YTO DNA False 2016-03-02 ENCODE 2 ENCFF099DHX, ENCFF767NHP 824290142 ENCODE Processing Pipeline 7058ffd9bc7907168dd0e689141b6517 https://www.encodeproject.org/files/ENCFF154UHN/@@download/ENCFF154UHN.bigWig hg19 released low read depth, missing genetic modification characterization ENCFF350TWP bigWig fold change over control ENCSR117WTM ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF24-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF099DHX, ENCFF767NHP, ENCFF807NZJ 1330941591 ENCODE Processing Pipeline 5263396cdae274cd4d8a04e2b2531fae https://www.encodeproject.org/files/ENCFF350TWP/@@download/ENCFF350TWP.bigWig hg19 released low read depth, missing genetic modification characterization ENCFF035UJY bigBed narrowPeak peaks ENCSR117WTM ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF24-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1 ENCFF710KBI 13307544 ENCODE Processing Pipeline 68fc316d475d96a54dc48d26b710ece3 https://www.encodeproject.org/files/ENCFF035UJY/@@download/ENCFF035UJY.bigBed hg19 released low read depth, missing genetic modification characterization ENCFF710KBI bed narrowPeak peaks ENCSR117WTM ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF24-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1 ENCFF099DHX, ENCFF807NZJ 6603746 ENCODE Processing Pipeline 5c96a10199f866ef8d8ff81060efc315 https://www.encodeproject.org/files/ENCFF710KBI/@@download/ENCFF710KBI.bed.gz hg19 released low read depth, missing genetic modification characterization ENCFF670KBE bed narrowPeak peaks ENCSR117WTM ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF24-human ENCAB728YTO DNA False 2016-03-02 ENCODE 2 ENCFF099DHX, ENCFF767NHP 6408804 ENCODE Processing Pipeline e30b7c45b6616618875246c074065c8f https://www.encodeproject.org/files/ENCFF670KBE/@@download/ENCFF670KBE.bed.gz hg19 released low read depth, missing genetic modification characterization ENCFF989QFY bigBed narrowPeak peaks ENCSR117WTM ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF24-human ENCAB728YTO DNA False 2016-03-02 ENCODE 2 ENCFF670KBE 13363638 ENCODE Processing Pipeline 26ffeae9540980f6cae3564b35ec42ba https://www.encodeproject.org/files/ENCFF989QFY/@@download/ENCFF989QFY.bigBed hg19 released low read depth, missing genetic modification characterization ENCFF694BDZ bed narrowPeak peaks ENCSR117WTM ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF24-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF099DHX, ENCFF767NHP, ENCFF807NZJ 7101195 ENCODE Processing Pipeline af90e22bf4cff8c3624eb3d60fcd0789 https://www.encodeproject.org/files/ENCFF694BDZ/@@download/ENCFF694BDZ.bed.gz hg19 released low read depth, missing genetic modification characterization ENCFF523OXF bigBed narrowPeak peaks ENCSR117WTM ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF24-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF694BDZ 13180767 ENCODE Processing Pipeline 5e8b19404887773dc086150e0b92eeb6 https://www.encodeproject.org/files/ENCFF523OXF/@@download/ENCFF523OXF.bigBed hg19 released low read depth, missing genetic modification characterization ENCFF524RZA bam unfiltered alignments ENCSR117WTM ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF24-human ENCAB728YTO DNA False 2016-03-02 ENCODE 2 100 ENCFF615CRG, ENCFF643CGH, ENCFF718HUU 4274950782 ENCODE Processing Pipeline f1867efa0e3f450ce2c274494609857f https://www.encodeproject.org/files/ENCFF524RZA/@@download/ENCFF524RZA.bam GRCh38 released low read depth, missing genetic modification characterization ENCFF561BHX bam unfiltered alignments ENCSR117WTM ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF24-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1 100 ENCFF157JAL, ENCFF643CGH, ENCFF977AJQ 4240152821 ENCODE Processing Pipeline 0fe131fce742d35a19a8fa53e4914544 https://www.encodeproject.org/files/ENCFF561BHX/@@download/ENCFF561BHX.bam GRCh38 released low read depth, missing genetic modification characterization ENCFF396AXY bam alignments ENCSR117WTM ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF24-human ENCAB728YTO DNA False 2016-03-02 ENCODE 2 100 ENCFF615CRG, ENCFF643CGH, ENCFF718HUU 3203536114 ENCODE Processing Pipeline a3d4e75e42a9b5b3c9d87a651404bcf9 https://www.encodeproject.org/files/ENCFF396AXY/@@download/ENCFF396AXY.bam GRCh38 released low read depth, missing genetic modification characterization ENCFF391BBO bam alignments ENCSR117WTM ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF24-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1 100 ENCFF157JAL, ENCFF643CGH, ENCFF977AJQ 3537540672 ENCODE Processing Pipeline 37d2700dfe277ecd4fe427b274655f16 https://www.encodeproject.org/files/ENCFF391BBO/@@download/ENCFF391BBO.bam GRCh38 released low read depth, missing genetic modification characterization ENCFF591LLI bigWig signal p-value ENCSR117WTM ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF24-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1 ENCFF343UNB, ENCFF391BBO 803593691 ENCODE Processing Pipeline 60a0b45477ec2fb4418ac6edce314307 https://www.encodeproject.org/files/ENCFF591LLI/@@download/ENCFF591LLI.bigWig GRCh38 released low read depth, missing genetic modification characterization ENCFF065LAU bigWig signal p-value ENCSR117WTM ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF24-human ENCAB728YTO DNA False 2016-03-02 ENCODE 2 ENCFF343UNB, ENCFF396AXY 868766286 ENCODE Processing Pipeline 82aea4f6463a0a66f955d55a9289ce42 https://www.encodeproject.org/files/ENCFF065LAU/@@download/ENCFF065LAU.bigWig GRCh38 released low read depth, missing genetic modification characterization ENCFF932PAM bigWig signal p-value ENCSR117WTM ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF24-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF343UNB, ENCFF391BBO, ENCFF396AXY 1086436720 ENCODE Processing Pipeline ae2fcacda33ae588cac78f1947cd32b0 https://www.encodeproject.org/files/ENCFF932PAM/@@download/ENCFF932PAM.bigWig GRCh38 released low read depth, missing genetic modification characterization ENCFF582YEI bigWig fold change over control ENCSR117WTM ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF24-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1 ENCFF343UNB, ENCFF391BBO 890928658 ENCODE Processing Pipeline 9f02363987fbc487e0bd39965166bfcf https://www.encodeproject.org/files/ENCFF582YEI/@@download/ENCFF582YEI.bigWig GRCh38 released low read depth, missing genetic modification characterization ENCFF098HID bigWig fold change over control ENCSR117WTM ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF24-human ENCAB728YTO DNA False 2016-03-02 ENCODE 2 ENCFF343UNB, ENCFF396AXY 813471340 ENCODE Processing Pipeline 689009a92e665dbc02cd2ea8cd93ce54 https://www.encodeproject.org/files/ENCFF098HID/@@download/ENCFF098HID.bigWig GRCh38 released low read depth, missing genetic modification characterization ENCFF134JNY bigWig fold change over control ENCSR117WTM ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF24-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF343UNB, ENCFF391BBO, ENCFF396AXY 1326906356 ENCODE Processing Pipeline 0751cae2dbb1b6a631d98155bdd2e98d https://www.encodeproject.org/files/ENCFF134JNY/@@download/ENCFF134JNY.bigWig GRCh38 released low read depth, missing genetic modification characterization ENCFF789XDM bed narrowPeak peaks ENCSR117WTM ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF24-human ENCAB728YTO DNA False 2016-03-02 ENCODE 2 ENCFF343UNB, ENCFF396AXY 6251232 ENCODE Processing Pipeline 844ca49edf86a942363064a8918b134c https://www.encodeproject.org/files/ENCFF789XDM/@@download/ENCFF789XDM.bed.gz GRCh38 released low read depth, missing genetic modification characterization ENCFF189PHJ bed narrowPeak peaks ENCSR117WTM ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF24-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1 ENCFF343UNB, ENCFF391BBO 6474392 ENCODE Processing Pipeline 55d7ce51df381dd813b7132ca6656014 https://www.encodeproject.org/files/ENCFF189PHJ/@@download/ENCFF189PHJ.bed.gz GRCh38 released low read depth, missing genetic modification characterization ENCFF065BOS bed narrowPeak peaks ENCSR117WTM ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF24-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF343UNB, ENCFF391BBO, ENCFF396AXY 7049991 ENCODE Processing Pipeline b76ace1ce3215e700684ab44cf688214 https://www.encodeproject.org/files/ENCFF065BOS/@@download/ENCFF065BOS.bed.gz GRCh38 released low read depth, missing genetic modification characterization ENCFF910LBV bigBed narrowPeak peaks ENCSR117WTM ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF24-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1 ENCFF189PHJ 13321281 ENCODE Processing Pipeline fab4e69e4954204d05c65dc47ee6ec47 https://www.encodeproject.org/files/ENCFF910LBV/@@download/ENCFF910LBV.bigBed GRCh38 released low read depth, missing genetic modification characterization ENCFF979GJQ bigBed narrowPeak peaks ENCSR117WTM ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF24-human ENCAB728YTO DNA False 2016-03-02 ENCODE 2 ENCFF789XDM 13366181 ENCODE Processing Pipeline 837a31ecbc6ee4e8e562f7d21c87d8e4 https://www.encodeproject.org/files/ENCFF979GJQ/@@download/ENCFF979GJQ.bigBed GRCh38 released low read depth, missing genetic modification characterization ENCFF430JDL bigBed narrowPeak peaks ENCSR117WTM ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF24-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF065BOS 13198460 ENCODE Processing Pipeline 4fb6ec9ab89b9d4457458748672474ad https://www.encodeproject.org/files/ENCFF430JDL/@@download/ENCFF430JDL.bigBed GRCh38 released low read depth, missing genetic modification characterization ENCFF805MFJ bigBed narrowPeak conservative idr thresholded peaks ENCSR117WTM ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF24-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF400JHH 543355 ENCODE Processing Pipeline f50bad43ced0901801661b2cf15b495b https://www.encodeproject.org/files/ENCFF805MFJ/@@download/ENCFF805MFJ.bigBed GRCh38 released low read depth, missing genetic modification characterization ENCFF400JHH bed narrowPeak conservative idr thresholded peaks ENCSR117WTM ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF24-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF065BOS, ENCFF189PHJ, ENCFF419RSJ, ENCFF789XDM 237619 ENCODE Processing Pipeline 45fedfcfc2106230520282d0e6dc2808 https://www.encodeproject.org/files/ENCFF400JHH/@@download/ENCFF400JHH.bed.gz GRCh38 released low read depth, missing genetic modification characterization ENCFF205IFX bed narrowPeak optimal idr thresholded peaks ENCSR117WTM ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF24-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF065BOS, ENCFF189PHJ, ENCFF419RSJ, ENCFF789XDM 266097 ENCODE Processing Pipeline 6fd62fd2b04c80cb9fbed279e5b2a0a1 https://www.encodeproject.org/files/ENCFF205IFX/@@download/ENCFF205IFX.bed.gz GRCh38 released low read depth, missing genetic modification characterization ENCFF441EBQ bigBed narrowPeak optimal idr thresholded peaks ENCSR117WTM ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF24-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF205IFX 591409 ENCODE Processing Pipeline 500aa9c1ff96b7f92dc0ca2b40bc2b47 https://www.encodeproject.org/files/ENCFF441EBQ/@@download/ENCFF441EBQ.bigBed GRCh38 released low read depth, missing genetic modification characterization ENCFF048DTR bed narrowPeak conservative idr thresholded peaks ENCSR117WTM ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF24-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF001TDO, ENCFF670KBE, ENCFF694BDZ, ENCFF710KBI 196845 ENCODE Processing Pipeline 0f056a0878f013af157453cb04729afc https://www.encodeproject.org/files/ENCFF048DTR/@@download/ENCFF048DTR.bed.gz hg19 released low read depth, missing genetic modification characterization ENCFF545DAF bed narrowPeak optimal idr thresholded peaks ENCSR117WTM ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF24-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF001TDO, ENCFF670KBE, ENCFF694BDZ, ENCFF710KBI 243151 ENCODE Processing Pipeline 2d74e845180c2708a1b8a2f4ba901591 https://www.encodeproject.org/files/ENCFF545DAF/@@download/ENCFF545DAF.bed.gz hg19 released low read depth, missing genetic modification characterization ENCFF989HLP bigBed narrowPeak conservative idr thresholded peaks ENCSR117WTM ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF24-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF048DTR 389043 ENCODE Processing Pipeline 6016fb3a576a6d2ea930931c43f316b0 https://www.encodeproject.org/files/ENCFF989HLP/@@download/ENCFF989HLP.bigBed hg19 released low read depth, missing genetic modification characterization ENCFF271WXD bigBed narrowPeak optimal idr thresholded peaks ENCSR117WTM ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF24-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF545DAF 450441 ENCODE Processing Pipeline 9ba52fa22c7b27d1ba1ad23bda89b085 https://www.encodeproject.org/files/ENCFF271WXD/@@download/ENCFF271WXD.bigBed hg19 released low read depth, missing genetic modification characterization ENCFF422UUJ bam unfiltered alignments ENCSR115BBC ChIP-seq EFO:0002067 K562 cell line Homo sapiens ASH1L-human ENCAB573MXX DNA False 2018-01-26 ENCODE 2 100 ENCFF235JMI, ENCFF807MUK, ENCFF993LLQ 10996470620 ENCODE Processing Pipeline 8c386133e47f55d8bb5846eb7ed0d908 https://www.encodeproject.org/files/ENCFF422UUJ/@@download/ENCFF422UUJ.bam hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF970QAQ bam unfiltered alignments ENCSR115BBC ChIP-seq EFO:0002067 K562 cell line Homo sapiens ASH1L-human ENCAB573MXX DNA False 2018-01-26 ENCODE 1 100 ENCFF158TRB, ENCFF737EQI, ENCFF807MUK 4572985781 ENCODE Processing Pipeline 728e68eec01aed4ef1e36ad45f270e95 https://www.encodeproject.org/files/ENCFF970QAQ/@@download/ENCFF970QAQ.bam hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF737EQI fastq reads ENCSR115BBC ChIP-seq EFO:0002067 K562 cell line Homo sapiens ASH1L-human ENCAB573MXX DNA False 2018-01-26 ENCODE 1 1 100 paired-ended 1 ENCFF158TRB 2143789088 Michael Snyder, Stanford da955f5a1495bb4df9153e76dc9f55bc https://www.encodeproject.org/files/ENCFF737EQI/@@download/ENCFF737EQI.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFF/ released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF993LLQ fastq reads ENCSR115BBC ChIP-seq EFO:0002067 K562 cell line Homo sapiens ASH1L-human ENCAB573MXX DNA False 2018-01-26 ENCODE 2 1 100 paired-ended 2 ENCFF235JMI 5448144573 Michael Snyder, Stanford a21c80540d44c6600d1705516693d6a9 https://www.encodeproject.org/files/ENCFF993LLQ/@@download/ENCFF993LLQ.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFA/ released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF158TRB fastq reads ENCSR115BBC ChIP-seq EFO:0002067 K562 cell line Homo sapiens ASH1L-human ENCAB573MXX DNA False 2018-01-26 ENCODE 1 1 100 paired-ended 2 ENCFF737EQI 2172829815 Michael Snyder, Stanford afc3d13fd06502dd18f455c81a0d518c https://www.encodeproject.org/files/ENCFF158TRB/@@download/ENCFF158TRB.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFH/ released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF235JMI fastq reads ENCSR115BBC ChIP-seq EFO:0002067 K562 cell line Homo sapiens ASH1L-human ENCAB573MXX DNA False 2018-01-26 ENCODE 2 1 100 paired-ended 1 ENCFF993LLQ 5353724299 Michael Snyder, Stanford c552dcbdfaf2830b81d35ebd4c864e0f https://www.encodeproject.org/files/ENCFF235JMI/@@download/ENCFF235JMI.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFD/ released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF761ADG bam alignments ENCSR115BBC ChIP-seq EFO:0002067 K562 cell line Homo sapiens ASH1L-human ENCAB573MXX DNA False 2018-01-26 ENCODE 1 100 ENCFF158TRB, ENCFF737EQI, ENCFF807MUK 3413154926 ENCODE Processing Pipeline cf1dc60c897df42f225124834fbd01d2 https://www.encodeproject.org/files/ENCFF761ADG/@@download/ENCFF761ADG.bam hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF605EYP bam alignments ENCSR115BBC ChIP-seq EFO:0002067 K562 cell line Homo sapiens ASH1L-human ENCAB573MXX DNA False 2018-01-26 ENCODE 2 100 ENCFF235JMI, ENCFF807MUK, ENCFF993LLQ 9019722965 ENCODE Processing Pipeline 418999710f2e14b42497c87a73ae07de https://www.encodeproject.org/files/ENCFF605EYP/@@download/ENCFF605EYP.bam hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF257PYN bigWig signal p-value ENCSR115BBC ChIP-seq EFO:0002067 K562 cell line Homo sapiens ASH1L-human ENCAB573MXX DNA False 2018-01-26 ENCODE 1 ENCFF581ZJL, ENCFF761ADG 1063976909 ENCODE Processing Pipeline 54b7e6d86e9337c85dd4dd5bf11779ac https://www.encodeproject.org/files/ENCFF257PYN/@@download/ENCFF257PYN.bigWig hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF770YZS bigWig signal p-value ENCSR115BBC ChIP-seq EFO:0002067 K562 cell line Homo sapiens ASH1L-human ENCAB573MXX DNA False 2018-01-26 ENCODE 2 ENCFF051LWI, ENCFF581ZJL, ENCFF605EYP 1975741905 ENCODE Processing Pipeline 5fa60fc86d441bfca453d0d23ba5eeb4 https://www.encodeproject.org/files/ENCFF770YZS/@@download/ENCFF770YZS.bigWig hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF708WMA bigWig fold change over control ENCSR115BBC ChIP-seq EFO:0002067 K562 cell line Homo sapiens ASH1L-human ENCAB573MXX DNA False 2018-01-26 ENCODE 2 ENCFF051LWI, ENCFF581ZJL, ENCFF605EYP 2257331967 ENCODE Processing Pipeline 3368db66c17d884b22ae46d0f76dd921 https://www.encodeproject.org/files/ENCFF708WMA/@@download/ENCFF708WMA.bigWig hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF011JGE bigWig fold change over control ENCSR115BBC ChIP-seq EFO:0002067 K562 cell line Homo sapiens ASH1L-human ENCAB573MXX DNA False 2018-01-26 ENCODE 1 ENCFF581ZJL, ENCFF761ADG 1078483136 ENCODE Processing Pipeline 86ea777fb48475a6ec45b27ecd8749ef https://www.encodeproject.org/files/ENCFF011JGE/@@download/ENCFF011JGE.bigWig hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF505CXS bed narrowPeak peaks ENCSR115BBC ChIP-seq EFO:0002067 K562 cell line Homo sapiens ASH1L-human ENCAB573MXX DNA False 2018-01-26 ENCODE 1, 2 ENCFF051LWI, ENCFF581ZJL, ENCFF605EYP, ENCFF761ADG 7276731 ENCODE Processing Pipeline f03019a225e86d921b52d095e8ec8ad2 https://www.encodeproject.org/files/ENCFF505CXS/@@download/ENCFF505CXS.bed.gz hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF527SPW bigWig signal p-value ENCSR115BBC ChIP-seq EFO:0002067 K562 cell line Homo sapiens ASH1L-human ENCAB573MXX DNA False 2018-01-26 ENCODE 1, 2 ENCFF051LWI, ENCFF581ZJL, ENCFF605EYP, ENCFF761ADG 2487463034 ENCODE Processing Pipeline 48735c5517a97e3484a6dfb80abd3682 https://www.encodeproject.org/files/ENCFF527SPW/@@download/ENCFF527SPW.bigWig hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF016YLI bigWig fold change over control ENCSR115BBC ChIP-seq EFO:0002067 K562 cell line Homo sapiens ASH1L-human ENCAB573MXX DNA False 2018-01-26 ENCODE 1, 2 ENCFF051LWI, ENCFF581ZJL, ENCFF605EYP, ENCFF761ADG 2521295002 ENCODE Processing Pipeline e0ae76c1e2213e0c2b9029dd627b5fff https://www.encodeproject.org/files/ENCFF016YLI/@@download/ENCFF016YLI.bigWig hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF756HQJ bed narrowPeak peaks ENCSR115BBC ChIP-seq EFO:0002067 K562 cell line Homo sapiens ASH1L-human ENCAB573MXX DNA False 2018-01-26 ENCODE 1 ENCFF581ZJL, ENCFF761ADG 6458710 ENCODE Processing Pipeline 47860d386d60296bafaba33d7797af80 https://www.encodeproject.org/files/ENCFF756HQJ/@@download/ENCFF756HQJ.bed.gz hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF216JOG bed narrowPeak peaks ENCSR115BBC ChIP-seq EFO:0002067 K562 cell line Homo sapiens ASH1L-human ENCAB573MXX DNA False 2018-01-26 ENCODE 2 ENCFF051LWI, ENCFF581ZJL, ENCFF605EYP 7257353 ENCODE Processing Pipeline 81289654f2e34566512ad9f7d1d7c675 https://www.encodeproject.org/files/ENCFF216JOG/@@download/ENCFF216JOG.bed.gz hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF873JQG bigBed narrowPeak peaks ENCSR115BBC ChIP-seq EFO:0002067 K562 cell line Homo sapiens ASH1L-human ENCAB573MXX DNA False 2018-01-26 ENCODE 2 ENCFF216JOG 13095550 ENCODE Processing Pipeline 5865f5ee0c596df0472b9d2d990017c1 https://www.encodeproject.org/files/ENCFF873JQG/@@download/ENCFF873JQG.bigBed hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF668SFF bigBed narrowPeak peaks ENCSR115BBC ChIP-seq EFO:0002067 K562 cell line Homo sapiens ASH1L-human ENCAB573MXX DNA False 2018-01-26 ENCODE 1 ENCFF756HQJ 11290027 ENCODE Processing Pipeline 8e30572b62696f08ef472dbf515d57bb https://www.encodeproject.org/files/ENCFF668SFF/@@download/ENCFF668SFF.bigBed hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF175PMC bigBed narrowPeak peaks ENCSR115BBC ChIP-seq EFO:0002067 K562 cell line Homo sapiens ASH1L-human ENCAB573MXX DNA False 2018-01-26 ENCODE 1, 2 ENCFF505CXS 13097265 ENCODE Processing Pipeline 9256f33b04f0e43d18e6a9d85ab91a64 https://www.encodeproject.org/files/ENCFF175PMC/@@download/ENCFF175PMC.bigBed hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF464ELQ bam unfiltered alignments ENCSR115BBC ChIP-seq EFO:0002067 K562 cell line Homo sapiens ASH1L-human ENCAB573MXX DNA False 2018-01-26 ENCODE 1 100 ENCFF158TRB, ENCFF643CGH, ENCFF737EQI 4576687277 ENCODE Processing Pipeline 6137b5d53642aaeae50304ea8bc174ee https://www.encodeproject.org/files/ENCFF464ELQ/@@download/ENCFF464ELQ.bam GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF310XPD bam alignments ENCSR115BBC ChIP-seq EFO:0002067 K562 cell line Homo sapiens ASH1L-human ENCAB573MXX DNA False 2018-01-26 ENCODE 1 100 ENCFF158TRB, ENCFF643CGH, ENCFF737EQI 3416000228 ENCODE Processing Pipeline 55e6533c3b02ab49dbf2df3f20398c5f https://www.encodeproject.org/files/ENCFF310XPD/@@download/ENCFF310XPD.bam GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF508PWE bam unfiltered alignments ENCSR115BBC ChIP-seq EFO:0002067 K562 cell line Homo sapiens ASH1L-human ENCAB573MXX DNA False 2018-01-26 ENCODE 2 100 ENCFF235JMI, ENCFF643CGH, ENCFF993LLQ 11004010272 ENCODE Processing Pipeline 67c8631c5bf275034c32030229177c09 https://www.encodeproject.org/files/ENCFF508PWE/@@download/ENCFF508PWE.bam GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF473BZX bam alignments ENCSR115BBC ChIP-seq EFO:0002067 K562 cell line Homo sapiens ASH1L-human ENCAB573MXX DNA False 2018-01-26 ENCODE 2 100 ENCFF235JMI, ENCFF643CGH, ENCFF993LLQ 9026489866 ENCODE Processing Pipeline 1e75209fdcca9638382b1dd287e8b4a5 https://www.encodeproject.org/files/ENCFF473BZX/@@download/ENCFF473BZX.bam GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF170JGH bigWig signal p-value ENCSR115BBC ChIP-seq EFO:0002067 K562 cell line Homo sapiens ASH1L-human ENCAB573MXX DNA False 2018-01-26 ENCODE 1 ENCFF310XPD, ENCFF910IKB 1103170396 ENCODE Processing Pipeline 56cfa2e3d8529b356987ae7a3ee24592 https://www.encodeproject.org/files/ENCFF170JGH/@@download/ENCFF170JGH.bigWig GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF375PNL bigWig signal p-value ENCSR115BBC ChIP-seq EFO:0002067 K562 cell line Homo sapiens ASH1L-human ENCAB573MXX DNA False 2018-01-26 ENCODE 2 ENCFF227IZS, ENCFF473BZX, ENCFF910IKB 2240817233 ENCODE Processing Pipeline 811f1d0526aeab674726dadba64c42b0 https://www.encodeproject.org/files/ENCFF375PNL/@@download/ENCFF375PNL.bigWig GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF678MAQ bigWig signal p-value ENCSR115BBC ChIP-seq EFO:0002067 K562 cell line Homo sapiens ASH1L-human ENCAB573MXX DNA False 2018-01-26 ENCODE 1, 2 ENCFF227IZS, ENCFF310XPD, ENCFF473BZX, ENCFF910IKB 2522580185 ENCODE Processing Pipeline 819231c86cc3158386ce63dfb3c38a7a https://www.encodeproject.org/files/ENCFF678MAQ/@@download/ENCFF678MAQ.bigWig GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF157NYV bigWig fold change over control ENCSR115BBC ChIP-seq EFO:0002067 K562 cell line Homo sapiens ASH1L-human ENCAB573MXX DNA False 2018-01-26 ENCODE 1 ENCFF310XPD, ENCFF910IKB 1078105045 ENCODE Processing Pipeline af5b179939e57db050a897a9ed7df056 https://www.encodeproject.org/files/ENCFF157NYV/@@download/ENCFF157NYV.bigWig GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF811GBI bigWig fold change over control ENCSR115BBC ChIP-seq EFO:0002067 K562 cell line Homo sapiens ASH1L-human ENCAB573MXX DNA False 2018-01-26 ENCODE 2 ENCFF227IZS, ENCFF473BZX, ENCFF910IKB 2253489840 ENCODE Processing Pipeline e98a3794513770900f21b75aff8d40b0 https://www.encodeproject.org/files/ENCFF811GBI/@@download/ENCFF811GBI.bigWig GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF129ETR bigWig fold change over control ENCSR115BBC ChIP-seq EFO:0002067 K562 cell line Homo sapiens ASH1L-human ENCAB573MXX DNA False 2018-01-26 ENCODE 1, 2 ENCFF227IZS, ENCFF310XPD, ENCFF473BZX, ENCFF910IKB 2557190446 ENCODE Processing Pipeline 1a131d45f80a64500637938dae1a2f5a https://www.encodeproject.org/files/ENCFF129ETR/@@download/ENCFF129ETR.bigWig GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF374RIS bed narrowPeak peaks ENCSR115BBC ChIP-seq EFO:0002067 K562 cell line Homo sapiens ASH1L-human ENCAB573MXX DNA False 2018-01-26 ENCODE 1 ENCFF310XPD, ENCFF910IKB 6409839 ENCODE Processing Pipeline d74c71fb967a2bbf8c46e6651290ead9 https://www.encodeproject.org/files/ENCFF374RIS/@@download/ENCFF374RIS.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF464TCJ bed narrowPeak peaks ENCSR115BBC ChIP-seq EFO:0002067 K562 cell line Homo sapiens ASH1L-human ENCAB573MXX DNA False 2018-01-26 ENCODE 2 ENCFF227IZS, ENCFF473BZX, ENCFF910IKB 7244753 ENCODE Processing Pipeline 1c67a74c7dc36af613abcd44afc256e2 https://www.encodeproject.org/files/ENCFF464TCJ/@@download/ENCFF464TCJ.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF637FJI bed narrowPeak peaks ENCSR115BBC ChIP-seq EFO:0002067 K562 cell line Homo sapiens ASH1L-human ENCAB573MXX DNA False 2018-01-26 ENCODE 1, 2 ENCFF227IZS, ENCFF310XPD, ENCFF473BZX, ENCFF910IKB 7274822 ENCODE Processing Pipeline cce24ae13f656822065c4eafe1ab7e37 https://www.encodeproject.org/files/ENCFF637FJI/@@download/ENCFF637FJI.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF448JKP bigBed narrowPeak peaks ENCSR115BBC ChIP-seq EFO:0002067 K562 cell line Homo sapiens ASH1L-human ENCAB573MXX DNA False 2018-01-26 ENCODE 1 ENCFF374RIS 13435415 ENCODE Processing Pipeline 1ef9d5a8c1cfada6755af568015e0d58 https://www.encodeproject.org/files/ENCFF448JKP/@@download/ENCFF448JKP.bigBed GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF730RUD bigBed narrowPeak peaks ENCSR115BBC ChIP-seq EFO:0002067 K562 cell line Homo sapiens ASH1L-human ENCAB573MXX DNA False 2018-01-26 ENCODE 2 ENCFF464TCJ 13099103 ENCODE Processing Pipeline ba7904c96796f4240eb11f08be8a3b42 https://www.encodeproject.org/files/ENCFF730RUD/@@download/ENCFF730RUD.bigBed GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF710PHH bigBed narrowPeak peaks ENCSR115BBC ChIP-seq EFO:0002067 K562 cell line Homo sapiens ASH1L-human ENCAB573MXX DNA False 2018-01-26 ENCODE 1, 2 ENCFF637FJI 13100951 ENCODE Processing Pipeline 5e0cde895de1fc66131e44cb8fbfdea4 https://www.encodeproject.org/files/ENCFF710PHH/@@download/ENCFF710PHH.bigBed GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF802XAO bigBed narrowPeak conservative idr thresholded peaks ENCSR115BBC ChIP-seq EFO:0002067 K562 cell line Homo sapiens ASH1L-human ENCAB573MXX DNA False 2018-01-26 ENCODE 1, 2 ENCFF151TIK 232248 ENCODE Processing Pipeline 36604663cbed7c4e7cde4575db5ca4db https://www.encodeproject.org/files/ENCFF802XAO/@@download/ENCFF802XAO.bigBed GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF151TIK bed narrowPeak conservative idr thresholded peaks ENCSR115BBC ChIP-seq EFO:0002067 K562 cell line Homo sapiens ASH1L-human ENCAB573MXX DNA False 2018-01-26 ENCODE 1, 2 ENCFF374RIS, ENCFF419RSJ, ENCFF464TCJ, ENCFF637FJI 86407 ENCODE Processing Pipeline f7809f7fb6a860c0df9f43977c3be589 https://www.encodeproject.org/files/ENCFF151TIK/@@download/ENCFF151TIK.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF958YSG bed narrowPeak optimal idr thresholded peaks ENCSR115BBC ChIP-seq EFO:0002067 K562 cell line Homo sapiens ASH1L-human ENCAB573MXX DNA False 2018-01-26 ENCODE 1, 2 ENCFF374RIS, ENCFF419RSJ, ENCFF464TCJ, ENCFF637FJI 150230 ENCODE Processing Pipeline fdb01496814e9dee749648544fe966fd https://www.encodeproject.org/files/ENCFF958YSG/@@download/ENCFF958YSG.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF965LQJ bigBed narrowPeak optimal idr thresholded peaks ENCSR115BBC ChIP-seq EFO:0002067 K562 cell line Homo sapiens ASH1L-human ENCAB573MXX DNA False 2018-01-26 ENCODE 1, 2 ENCFF958YSG 328933 ENCODE Processing Pipeline fdd815be612941ac7398eebbaf961be1 https://www.encodeproject.org/files/ENCFF965LQJ/@@download/ENCFF965LQJ.bigBed GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF301MQS bigBed narrowPeak optimal idr thresholded peaks ENCSR115BBC ChIP-seq EFO:0002067 K562 cell line Homo sapiens ASH1L-human ENCAB573MXX DNA False 2018-01-26 ENCODE 1, 2 ENCFF235ZZP 298177 ENCODE Processing Pipeline 12a6761bd8f92e4e4c24f8291281f016 https://www.encodeproject.org/files/ENCFF301MQS/@@download/ENCFF301MQS.bigBed hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF235ZZP bed narrowPeak optimal idr thresholded peaks ENCSR115BBC ChIP-seq EFO:0002067 K562 cell line Homo sapiens ASH1L-human ENCAB573MXX DNA False 2018-01-26 ENCODE 1, 2 ENCFF001TDO, ENCFF216JOG, ENCFF505CXS, ENCFF756HQJ 129016 ENCODE Processing Pipeline d8ef3cc4d24c5415e9a82592ed82fb4d https://www.encodeproject.org/files/ENCFF235ZZP/@@download/ENCFF235ZZP.bed.gz hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF701QFG bed narrowPeak conservative idr thresholded peaks ENCSR115BBC ChIP-seq EFO:0002067 K562 cell line Homo sapiens ASH1L-human ENCAB573MXX DNA False 2018-01-26 ENCODE 1, 2 ENCFF001TDO, ENCFF216JOG, ENCFF505CXS, ENCFF756HQJ 74127 ENCODE Processing Pipeline b04de5e3fbcf71fbd03192b09bb7f09b https://www.encodeproject.org/files/ENCFF701QFG/@@download/ENCFF701QFG.bed.gz hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF205TTE bigBed narrowPeak conservative idr thresholded peaks ENCSR115BBC ChIP-seq EFO:0002067 K562 cell line Homo sapiens ASH1L-human ENCAB573MXX DNA False 2018-01-26 ENCODE 1, 2 ENCFF701QFG 174186 ENCODE Processing Pipeline 720e105e2d4479fbb0b57fd7a9758c35 https://www.encodeproject.org/files/ENCFF205TTE/@@download/ENCFF205TTE.bigBed hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF000YOS fastq reads ENCSR000FAY ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 1 1 27 single-ended 339545256 Sherman Weissman, Yale 9cb4b5011f82615ffca787c7508736a7 https://www.encodeproject.org/files/ENCFF000YOS/@@download/ENCFF000YOS.fastq.gz Illumina Genome Analyzer /files/ENCFF000YOV/ released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF000YOU fastq reads ENCSR000FAY ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 2 1 34 single-ended 503492336 Sherman Weissman, Yale f3d7c25a7330574e834c11da9bdb469c https://www.encodeproject.org/files/ENCFF000YOU/@@download/ENCFF000YOU.fastq.gz Illumina Genome Analyzer /files/ENCFF000YOV/ released mixed read lengths, control low read depth, inconsistent control read length biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF000YVY bam alignments ENCSR000FAY ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 1 ENCFF000YOS 434660637 Sherman Weissman, Yale 1164f5368ebccbba4169fc99f977cbe7 https://www.encodeproject.org/files/ENCFF000YVY/@@download/ENCFF000YVY.bam hg19 archived mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF000YVZ bam alignments ENCSR000FAY ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 2 ENCFF000YOU 637240446 Sherman Weissman, Yale 5e7a59eb1f2cb4d284e8d0058000d68e https://www.encodeproject.org/files/ENCFF000YVZ/@@download/ENCFF000YVZ.bam hg19 archived mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF000YWA bigBed narrowPeak peaks ENCSR000FAY ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE ENCFF001VOD 495556 Sherman Weissman, Yale 5b02c7db351b20f5cda5b0e4bd07bb23 https://www.encodeproject.org/files/ENCFF000YWA/@@download/ENCFF000YWA.bigBed hg19 archived mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF000YWB bigWig signal ENCSR000FAY ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 287073989 Sherman Weissman, Yale 887fd3a5d52d62b974e3be3544cbfbeb https://www.encodeproject.org/files/ENCFF000YWB/@@download/ENCFF000YWB.bigWig hg19 archived mixed read lengths, control low read depth biological replicates with identical biosample, missing derived_from insufficient read length, insufficient read depth ENCFF001VOD bed narrowPeak peaks ENCSR000FAY ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 184328 Sherman Weissman, Yale d0fcc2fae7c18772508d2e9676a411ea https://www.encodeproject.org/files/ENCFF001VOD/@@download/ENCFF001VOD.bed.gz hg19 archived mixed read lengths, control low read depth biological replicates with identical biosample, missing derived_from insufficient read length, insufficient read depth ENCFF002CXM bed narrowPeak optimal idr thresholded peaks ENCSR000FAY ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 277358 ENCODE Consortium Analysis Working Group cb46bdb294329aff6896b6c0f804bbc7 https://www.encodeproject.org/files/ENCFF002CXM/@@download/ENCFF002CXM.bed.gz hg19 archived mixed read lengths, control low read depth biological replicates with identical biosample, missing derived_from insufficient read length, insufficient read depth ENCFF242XXW bigBed narrowPeak optimal idr thresholded peaks ENCSR000FAY ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE ENCFF002CXM 753061 ENCODE Consortium b39281a8170223c693d0bf41d44ab1fc https://www.encodeproject.org/files/ENCFF242XXW/@@download/ENCFF242XXW.bigBed hg19 archived mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF599THE bam unfiltered alignments ENCSR000FAY ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 1 27 ENCFF000YOS, ENCFF807MUK 435178305 ENCODE Processing Pipeline b69b254d4fee6201c789c196d6437153 https://www.encodeproject.org/files/ENCFF599THE/@@download/ENCFF599THE.bam hg19 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF454MRU bam alignments ENCSR000FAY ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 1 27 ENCFF000YOS, ENCFF807MUK 288508382 ENCODE Processing Pipeline f65bde2aeaeca820f1ef260f590fe269 https://www.encodeproject.org/files/ENCFF454MRU/@@download/ENCFF454MRU.bam hg19 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF976EMR bam alignments ENCSR000FAY ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 1 27 ENCFF000YOS, ENCFF643CGH 288154540 ENCODE Processing Pipeline ea410e5c8524596d8ac34259ab1a7bf5 https://www.encodeproject.org/files/ENCFF976EMR/@@download/ENCFF976EMR.bam GRCh38 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF556FRG bam unfiltered alignments ENCSR000FAY ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 1 27 ENCFF000YOS, ENCFF643CGH 435720994 ENCODE Processing Pipeline af9f202cae808b8de6236c9fdbf96475 https://www.encodeproject.org/files/ENCFF556FRG/@@download/ENCFF556FRG.bam GRCh38 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF600WEJ bam unfiltered alignments ENCSR000FAY ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 2 27 ENCFF000YOU, ENCFF807MUK 575486471 ENCODE Processing Pipeline ca0963a581ee6349b1db5feb2eee8133 https://www.encodeproject.org/files/ENCFF600WEJ/@@download/ENCFF600WEJ.bam hg19 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF466HUV bam alignments ENCSR000FAY ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 2 27 ENCFF000YOU, ENCFF807MUK 294656434 ENCODE Processing Pipeline f93925a7b402301128eee01b9fc5f91b https://www.encodeproject.org/files/ENCFF466HUV/@@download/ENCFF466HUV.bam hg19 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF544QGF bam unfiltered alignments ENCSR000FAY ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 2 27 ENCFF000YOU, ENCFF643CGH 577059679 ENCODE Processing Pipeline 2e9b8a438e4c9f5201c19eb6abaa2c40 https://www.encodeproject.org/files/ENCFF544QGF/@@download/ENCFF544QGF.bam GRCh38 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF323MTY bam alignments ENCSR000FAY ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 2 27 ENCFF000YOU, ENCFF643CGH 294153029 ENCODE Processing Pipeline a09dff64d09b96bb734781c57e0b8346 https://www.encodeproject.org/files/ENCFF323MTY/@@download/ENCFF323MTY.bam GRCh38 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF258VMQ bigWig signal p-value ENCSR000FAY ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 1 ENCFF767FSP, ENCFF976EMR 251755247 ENCODE Processing Pipeline 0c69c676f4c384c6cdf18ff97d12918b https://www.encodeproject.org/files/ENCFF258VMQ/@@download/ENCFF258VMQ.bigWig GRCh38 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF533NLU bigWig fold change over control ENCSR000FAY ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 1 ENCFF454MRU, ENCFF650MOB 142882301 ENCODE Processing Pipeline 0c0e061120628e840d3acabc52846e70 https://www.encodeproject.org/files/ENCFF533NLU/@@download/ENCFF533NLU.bigWig hg19 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF794ADR bigWig signal p-value ENCSR000FAY ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 1 ENCFF454MRU, ENCFF650MOB 247545131 ENCODE Processing Pipeline 401d3dcf3b81d46a10fda4e002866af4 https://www.encodeproject.org/files/ENCFF794ADR/@@download/ENCFF794ADR.bigWig hg19 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF063LKT bigWig signal p-value ENCSR000FAY ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF454MRU, ENCFF466HUV, ENCFF650MOB 305059388 ENCODE Processing Pipeline eff600e1f182c073221e06648ce67462 https://www.encodeproject.org/files/ENCFF063LKT/@@download/ENCFF063LKT.bigWig hg19 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF531ZGM bigWig signal p-value ENCSR000FAY ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 2 ENCFF323MTY, ENCFF767FSP 239512246 ENCODE Processing Pipeline 238f0d7b469e816686030d2c1f80e4d4 https://www.encodeproject.org/files/ENCFF531ZGM/@@download/ENCFF531ZGM.bigWig GRCh38 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF093ING bigWig signal p-value ENCSR000FAY ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 2 ENCFF466HUV, ENCFF650MOB 269378826 ENCODE Processing Pipeline 8c5ef5e377dadd3ce396a745b68c9d0c https://www.encodeproject.org/files/ENCFF093ING/@@download/ENCFF093ING.bigWig hg19 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF355JDJ bigWig signal p-value ENCSR000FAY ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF323MTY, ENCFF767FSP, ENCFF976EMR 308457395 ENCODE Processing Pipeline aef24aa64a6b680c81a8e220d9525974 https://www.encodeproject.org/files/ENCFF355JDJ/@@download/ENCFF355JDJ.bigWig GRCh38 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF831RAZ bigWig fold change over control ENCSR000FAY ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 1 ENCFF767FSP, ENCFF976EMR 142578563 ENCODE Processing Pipeline 5121a736bf13607dd74edbe4c3137e88 https://www.encodeproject.org/files/ENCFF831RAZ/@@download/ENCFF831RAZ.bigWig GRCh38 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF441MSA bigWig fold change over control ENCSR000FAY ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 2 ENCFF323MTY, ENCFF767FSP 140741943 ENCODE Processing Pipeline 4c47818c0ff6afda52aea5897297ba70 https://www.encodeproject.org/files/ENCFF441MSA/@@download/ENCFF441MSA.bigWig GRCh38 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF573ZMO bed narrowPeak peaks ENCSR000FAY ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 2 ENCFF466HUV, ENCFF650MOB 3850971 ENCODE Processing Pipeline 74c008bd757c6d578f4dcedfc1637ff4 https://www.encodeproject.org/files/ENCFF573ZMO/@@download/ENCFF573ZMO.bed.gz hg19 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF002ZYX bigWig fold change over control ENCSR000FAY ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF323MTY, ENCFF767FSP, ENCFF976EMR 246350102 ENCODE Processing Pipeline 0ae11ae6655d3221741e72af7463d113 https://www.encodeproject.org/files/ENCFF002ZYX/@@download/ENCFF002ZYX.bigWig GRCh38 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF311MKC bigWig fold change over control ENCSR000FAY ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF454MRU, ENCFF466HUV, ENCFF650MOB 245878815 ENCODE Processing Pipeline dbeb6ae414aed03978ade8507766f225 https://www.encodeproject.org/files/ENCFF311MKC/@@download/ENCFF311MKC.bigWig hg19 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF791BYM bigWig fold change over control ENCSR000FAY ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 2 ENCFF466HUV, ENCFF650MOB 135920121 ENCODE Processing Pipeline 6b23bf2a2ab6c52466df5f4cc84db11b https://www.encodeproject.org/files/ENCFF791BYM/@@download/ENCFF791BYM.bigWig hg19 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF301QYN bigBed narrowPeak peaks ENCSR000FAY ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 2 ENCFF573ZMO 9733893 ENCODE Processing Pipeline e3aa459ae47a5574029002f3b7724511 https://www.encodeproject.org/files/ENCFF301QYN/@@download/ENCFF301QYN.bigBed hg19 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF368DTT bed narrowPeak peaks ENCSR000FAY ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 1 ENCFF454MRU, ENCFF650MOB 5165500 ENCODE Processing Pipeline b2516f78e2380fda0832e66adb41f82f https://www.encodeproject.org/files/ENCFF368DTT/@@download/ENCFF368DTT.bed.gz hg19 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF502ZBE bed narrowPeak peaks ENCSR000FAY ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF454MRU, ENCFF466HUV, ENCFF650MOB 5928682 ENCODE Processing Pipeline f5efc8a924b03586579828582a373ff3 https://www.encodeproject.org/files/ENCFF502ZBE/@@download/ENCFF502ZBE.bed.gz hg19 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF957KTN bed narrowPeak peaks ENCSR000FAY ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 2 ENCFF323MTY, ENCFF767FSP 3593607 ENCODE Processing Pipeline 5084d6b0a1bfb45803a0a4d4829ea7cd https://www.encodeproject.org/files/ENCFF957KTN/@@download/ENCFF957KTN.bed.gz GRCh38 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF649AEV bed narrowPeak peaks ENCSR000FAY ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 1 ENCFF767FSP, ENCFF976EMR 5249812 ENCODE Processing Pipeline 4efad11cc85307d87ca817b956ebfbe0 https://www.encodeproject.org/files/ENCFF649AEV/@@download/ENCFF649AEV.bed.gz GRCh38 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF095QTJ bigBed narrowPeak peaks ENCSR000FAY ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF502ZBE 12403722 ENCODE Processing Pipeline 2d3dc4b5a057a3e4bd05cbd7079079fb https://www.encodeproject.org/files/ENCFF095QTJ/@@download/ENCFF095QTJ.bigBed hg19 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF842HZT bed narrowPeak peaks ENCSR000FAY ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF323MTY, ENCFF767FSP, ENCFF976EMR 5926687 ENCODE Processing Pipeline 3996d5273c51c5a1700409a65e21dccf https://www.encodeproject.org/files/ENCFF842HZT/@@download/ENCFF842HZT.bed.gz GRCh38 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF419CNI bigBed narrowPeak peaks ENCSR000FAY ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 1 ENCFF368DTT 11022723 ENCODE Processing Pipeline 1e55aa17f64f7425eb5116a85ba2f54f https://www.encodeproject.org/files/ENCFF419CNI/@@download/ENCFF419CNI.bigBed hg19 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF407SGY bigBed narrowPeak peaks ENCSR000FAY ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 1 ENCFF649AEV 11109950 ENCODE Processing Pipeline bebac3094794d6902397397d09401462 https://www.encodeproject.org/files/ENCFF407SGY/@@download/ENCFF407SGY.bigBed GRCh38 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF772UWM bed narrowPeak conservative idr thresholded peaks ENCSR000FAY ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF001TDO, ENCFF368DTT, ENCFF502ZBE, ENCFF573ZMO 306209 ENCODE Processing Pipeline f3d4a2bbb85e48cf99a78773a346516e https://www.encodeproject.org/files/ENCFF772UWM/@@download/ENCFF772UWM.bed.gz hg19 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF662YQK bed narrowPeak optimal idr thresholded peaks ENCSR000FAY ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF001TDO, ENCFF368DTT, ENCFF502ZBE, ENCFF573ZMO 329502 ENCODE Processing Pipeline f8f090e562e1e4b21badd0f06731c1e1 https://www.encodeproject.org/files/ENCFF662YQK/@@download/ENCFF662YQK.bed.gz hg19 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF976PQJ bigBed narrowPeak conservative idr thresholded peaks ENCSR000FAY ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF772UWM 666795 ENCODE Processing Pipeline f5a82c48162169e93abb67bb035b2871 https://www.encodeproject.org/files/ENCFF976PQJ/@@download/ENCFF976PQJ.bigBed hg19 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF571WCN bigBed narrowPeak peaks ENCSR000FAY ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 2 ENCFF957KTN 7775906 ENCODE Processing Pipeline 9bff620aa2ec69ee1424e045bfb25660 https://www.encodeproject.org/files/ENCFF571WCN/@@download/ENCFF571WCN.bigBed GRCh38 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF953IAN bigBed narrowPeak optimal idr thresholded peaks ENCSR000FAY ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF662YQK 698939 ENCODE Processing Pipeline cc1cefa664430e757524c4c02f25b664 https://www.encodeproject.org/files/ENCFF953IAN/@@download/ENCFF953IAN.bigBed hg19 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF793VEV bigBed narrowPeak peaks ENCSR000FAY ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF842HZT 12407694 ENCODE Processing Pipeline 4dc53a5358eb3298c8bb642d5ff52c85 https://www.encodeproject.org/files/ENCFF793VEV/@@download/ENCFF793VEV.bigBed GRCh38 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF432VIV bed narrowPeak conservative idr thresholded peaks ENCSR000FAY ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF419RSJ, ENCFF649AEV, ENCFF842HZT, ENCFF957KTN 306724 ENCODE Processing Pipeline 901f746eee80e464cd6b31b9e41ce2f7 https://www.encodeproject.org/files/ENCFF432VIV/@@download/ENCFF432VIV.bed.gz GRCh38 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF413CLT bigBed narrowPeak conservative idr thresholded peaks ENCSR000FAY ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF432VIV 668871 ENCODE Processing Pipeline 42b1be7f019910b27ccaa22d7d7414b8 https://www.encodeproject.org/files/ENCFF413CLT/@@download/ENCFF413CLT.bigBed GRCh38 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF776EUB bigBed narrowPeak optimal idr thresholded peaks ENCSR000FAY ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF668VIK 697288 ENCODE Processing Pipeline 3758060a731bbc1513fcdd0a08397d60 https://www.encodeproject.org/files/ENCFF776EUB/@@download/ENCFF776EUB.bigBed GRCh38 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF668VIK bed narrowPeak optimal idr thresholded peaks ENCSR000FAY ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF419RSJ, ENCFF649AEV, ENCFF842HZT, ENCFF957KTN 327240 ENCODE Processing Pipeline 9da46723e82c01d8cac75af9b1c42054 https://www.encodeproject.org/files/ENCFF668VIK/@@download/ENCFF668VIK.bed.gz GRCh38 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF288JVH bam unfiltered alignments ENCSR431XGJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens PYGO2-human ENCAB882VQT DNA False 2018-01-26 ENCODE 2 100 ENCFF165JGK, ENCFF492UOJ, ENCFF807MUK 5480248242 ENCODE Processing Pipeline 5feba57adb9a1f6c9a224dc7f09eddc9 https://www.encodeproject.org/files/ENCFF288JVH/@@download/ENCFF288JVH.bam hg19 released borderline replicate concordance, low read depth experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF749OJN bam unfiltered alignments ENCSR431XGJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens PYGO2-human ENCAB882VQT DNA False 2018-01-26 ENCODE 3 100 ENCFF113QZV, ENCFF807MUK, ENCFF891LJI 3562864984 ENCODE Processing Pipeline 639a5bc9469966dffe18ec0c9049eb07 https://www.encodeproject.org/files/ENCFF749OJN/@@download/ENCFF749OJN.bam hg19 released borderline replicate concordance, low read depth experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF492UOJ fastq reads ENCSR431XGJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens PYGO2-human ENCAB882VQT DNA False 2018-01-26 ENCODE 2 1 100 paired-ended 1 ENCFF165JGK 2446172386 Michael Snyder, Stanford 28cdec63a3bc37a177dfafa2c4597707 https://www.encodeproject.org/files/ENCFF492UOJ/@@download/ENCFF492UOJ.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFD/ released borderline replicate concordance, low read depth experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF113QZV fastq reads ENCSR431XGJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens PYGO2-human ENCAB882VQT DNA False 2018-01-26 ENCODE 3 1 100 paired-ended 1 ENCFF891LJI 1594726281 Michael Snyder, Stanford c2ae1736a1a651e5215ca5f7fe7ca762 https://www.encodeproject.org/files/ENCFF113QZV/@@download/ENCFF113QZV.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFF/ released borderline replicate concordance, low read depth experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF891LJI fastq reads ENCSR431XGJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens PYGO2-human ENCAB882VQT DNA False 2018-01-26 ENCODE 3 1 100 paired-ended 2 ENCFF113QZV 1641099412 Michael Snyder, Stanford 51f28c16e941b5511f0eab4bd32e46bf https://www.encodeproject.org/files/ENCFF891LJI/@@download/ENCFF891LJI.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFH/ released borderline replicate concordance, low read depth experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF165JGK fastq reads ENCSR431XGJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens PYGO2-human ENCAB882VQT DNA False 2018-01-26 ENCODE 2 1 100 paired-ended 2 ENCFF492UOJ 2508952259 Michael Snyder, Stanford 8e45fbb838054d7b5f56d500338e2180 https://www.encodeproject.org/files/ENCFF165JGK/@@download/ENCFF165JGK.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFA/ released borderline replicate concordance, low read depth experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF965IIX bam alignments ENCSR431XGJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens PYGO2-human ENCAB882VQT DNA False 2018-01-26 ENCODE 3 100 ENCFF113QZV, ENCFF807MUK, ENCFF891LJI 2987738184 ENCODE Processing Pipeline 4b26c9a74ec8808cd5c4818486c2cc47 https://www.encodeproject.org/files/ENCFF965IIX/@@download/ENCFF965IIX.bam hg19 released borderline replicate concordance, low read depth experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF021QKM bam alignments ENCSR431XGJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens PYGO2-human ENCAB882VQT DNA False 2018-01-26 ENCODE 2 100 ENCFF165JGK, ENCFF492UOJ, ENCFF807MUK 4559827782 ENCODE Processing Pipeline 83a1fa4884eb6bafd23d400c815d1cd8 https://www.encodeproject.org/files/ENCFF021QKM/@@download/ENCFF021QKM.bam hg19 released borderline replicate concordance, low read depth experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF739OTD bigWig signal p-value ENCSR431XGJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens PYGO2-human ENCAB882VQT DNA False 2018-01-26 ENCODE 2 ENCFF021QKM, ENCFF051LWI 1161441211 ENCODE Processing Pipeline 78280ba76be1ab007d93e96f9378852f https://www.encodeproject.org/files/ENCFF739OTD/@@download/ENCFF739OTD.bigWig hg19 released borderline replicate concordance, low read depth experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF815AQW bigWig signal p-value ENCSR431XGJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens PYGO2-human ENCAB882VQT DNA False 2018-01-26 ENCODE 3 ENCFF581ZJL, ENCFF965IIX 1015874087 ENCODE Processing Pipeline 5d83dc137daeb5da1b312706a1cad03d https://www.encodeproject.org/files/ENCFF815AQW/@@download/ENCFF815AQW.bigWig hg19 released borderline replicate concordance, low read depth experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF205DHT bigWig signal p-value ENCSR431XGJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens PYGO2-human ENCAB882VQT DNA False 2018-01-26 ENCODE 2, 3 ENCFF021QKM, ENCFF051LWI, ENCFF581ZJL, ENCFF965IIX 1793994525 ENCODE Processing Pipeline 3c014a0b15890ad3b50183957dfe855c https://www.encodeproject.org/files/ENCFF205DHT/@@download/ENCFF205DHT.bigWig hg19 released borderline replicate concordance, low read depth experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF111BZA bigWig fold change over control ENCSR431XGJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens PYGO2-human ENCAB882VQT DNA False 2018-01-26 ENCODE 2 ENCFF021QKM, ENCFF051LWI 1192207947 ENCODE Processing Pipeline 99446f66343c4041168ddb81c580ba51 https://www.encodeproject.org/files/ENCFF111BZA/@@download/ENCFF111BZA.bigWig hg19 released borderline replicate concordance, low read depth experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF620QKB bigWig fold change over control ENCSR431XGJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens PYGO2-human ENCAB882VQT DNA False 2018-01-26 ENCODE 3 ENCFF581ZJL, ENCFF965IIX 979684859 ENCODE Processing Pipeline efe6570138ed72741ee8416c1908a688 https://www.encodeproject.org/files/ENCFF620QKB/@@download/ENCFF620QKB.bigWig hg19 released borderline replicate concordance, low read depth experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF087NBH bed narrowPeak peaks ENCSR431XGJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens PYGO2-human ENCAB882VQT DNA False 2018-01-26 ENCODE 3 ENCFF581ZJL, ENCFF965IIX 6391853 ENCODE Processing Pipeline 68000bd1d857d5300240120488bc52e1 https://www.encodeproject.org/files/ENCFF087NBH/@@download/ENCFF087NBH.bed.gz hg19 released borderline replicate concordance, low read depth experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF957LKR bigWig fold change over control ENCSR431XGJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens PYGO2-human ENCAB882VQT DNA False 2018-01-26 ENCODE 2, 3 ENCFF021QKM, ENCFF051LWI, ENCFF581ZJL, ENCFF965IIX 1979847779 ENCODE Processing Pipeline 6e51960f0f2727417ce67c8549c139e4 https://www.encodeproject.org/files/ENCFF957LKR/@@download/ENCFF957LKR.bigWig hg19 released borderline replicate concordance, low read depth experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF268LPT bed narrowPeak peaks ENCSR431XGJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens PYGO2-human ENCAB882VQT DNA False 2018-01-26 ENCODE 2, 3 ENCFF021QKM, ENCFF051LWI, ENCFF581ZJL, ENCFF965IIX 7165808 ENCODE Processing Pipeline d90c1a9913267c01a0226fecdb8d4e98 https://www.encodeproject.org/files/ENCFF268LPT/@@download/ENCFF268LPT.bed.gz hg19 released borderline replicate concordance, low read depth experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF078LXS bed narrowPeak peaks ENCSR431XGJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens PYGO2-human ENCAB882VQT DNA False 2018-01-26 ENCODE 2 ENCFF021QKM, ENCFF051LWI 6475842 ENCODE Processing Pipeline 99400599479cd250e63e2448cfb3e94f https://www.encodeproject.org/files/ENCFF078LXS/@@download/ENCFF078LXS.bed.gz hg19 released borderline replicate concordance, low read depth experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF927CKY bigBed narrowPeak peaks ENCSR431XGJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens PYGO2-human ENCAB882VQT DNA False 2018-01-26 ENCODE 3 ENCFF087NBH 13224800 ENCODE Processing Pipeline b38912f2ea02cd5dc5741785d09bf231 https://www.encodeproject.org/files/ENCFF927CKY/@@download/ENCFF927CKY.bigBed hg19 released borderline replicate concordance, low read depth experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF981YXI bigBed narrowPeak peaks ENCSR431XGJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens PYGO2-human ENCAB882VQT DNA False 2018-01-26 ENCODE 2 ENCFF078LXS 11157985 ENCODE Processing Pipeline 9c0ff07185ab120d9321affd2f36906d https://www.encodeproject.org/files/ENCFF981YXI/@@download/ENCFF981YXI.bigBed hg19 released borderline replicate concordance, low read depth experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF933YZM bigBed narrowPeak peaks ENCSR431XGJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens PYGO2-human ENCAB882VQT DNA False 2018-01-26 ENCODE 2, 3 ENCFF268LPT 13206765 ENCODE Processing Pipeline 0921eef6e22d45a6afef9234f4a812e7 https://www.encodeproject.org/files/ENCFF933YZM/@@download/ENCFF933YZM.bigBed hg19 released borderline replicate concordance, low read depth experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF135PKG bam unfiltered alignments ENCSR431XGJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens PYGO2-human ENCAB882VQT DNA False 2018-01-26 ENCODE 3 100 ENCFF113QZV, ENCFF643CGH, ENCFF891LJI 3566212081 ENCODE Processing Pipeline 580a954560b7eb28efaf661164ab69fb https://www.encodeproject.org/files/ENCFF135PKG/@@download/ENCFF135PKG.bam GRCh38 released borderline replicate concordance, low read depth experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF830UYZ bam unfiltered alignments ENCSR431XGJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens PYGO2-human ENCAB882VQT DNA False 2018-01-26 ENCODE 2 100 ENCFF165JGK, ENCFF492UOJ, ENCFF643CGH 5488594334 ENCODE Processing Pipeline 75da7fd2324aab54421f00f9a48fc5da https://www.encodeproject.org/files/ENCFF830UYZ/@@download/ENCFF830UYZ.bam GRCh38 released borderline replicate concordance, low read depth experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF198WIX bam alignments ENCSR431XGJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens PYGO2-human ENCAB882VQT DNA False 2018-01-26 ENCODE 3 100 ENCFF113QZV, ENCFF643CGH, ENCFF891LJI 2989825714 ENCODE Processing Pipeline f30fd822fe3a623512fb0c495c5064f5 https://www.encodeproject.org/files/ENCFF198WIX/@@download/ENCFF198WIX.bam GRCh38 released borderline replicate concordance, low read depth experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF293PYL bam alignments ENCSR431XGJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens PYGO2-human ENCAB882VQT DNA False 2018-01-26 ENCODE 2 100 ENCFF165JGK, ENCFF492UOJ, ENCFF643CGH 4563769834 ENCODE Processing Pipeline 68ca6779bd8fc0c253f2e6315bdb1e6f https://www.encodeproject.org/files/ENCFF293PYL/@@download/ENCFF293PYL.bam GRCh38 released borderline replicate concordance, low read depth experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF975PZB bigWig signal p-value ENCSR431XGJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens PYGO2-human ENCAB882VQT DNA False 2018-01-26 ENCODE 2 ENCFF293PYL 1052271499 ENCODE Processing Pipeline ba5a3fc82e238e5999b6d20d7e32ecc0 https://www.encodeproject.org/files/ENCFF975PZB/@@download/ENCFF975PZB.bigWig GRCh38 released borderline replicate concordance, low read depth experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF908YGZ bigWig signal p-value ENCSR431XGJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens PYGO2-human ENCAB882VQT DNA False 2018-01-26 ENCODE 3 ENCFF198WIX 953718233 ENCODE Processing Pipeline c8c4dc6191172eb26ed4500cc850dbd7 https://www.encodeproject.org/files/ENCFF908YGZ/@@download/ENCFF908YGZ.bigWig GRCh38 released borderline replicate concordance, low read depth experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF080SFO bigWig signal p-value ENCSR431XGJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens PYGO2-human ENCAB882VQT DNA False 2018-01-26 ENCODE 2, 3 ENCFF198WIX, ENCFF293PYL 1778421268 ENCODE Processing Pipeline 9bf8198e7d070fa762898f723271cc70 https://www.encodeproject.org/files/ENCFF080SFO/@@download/ENCFF080SFO.bigWig GRCh38 released borderline replicate concordance, low read depth experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF770YSX bigWig fold change over control ENCSR431XGJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens PYGO2-human ENCAB882VQT DNA False 2018-01-26 ENCODE 2 ENCFF293PYL 1196236299 ENCODE Processing Pipeline bf4b90c37e7060afdc73f6da3dd4bc78 https://www.encodeproject.org/files/ENCFF770YSX/@@download/ENCFF770YSX.bigWig GRCh38 released borderline replicate concordance, low read depth experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF261EZF bigWig fold change over control ENCSR431XGJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens PYGO2-human ENCAB882VQT DNA False 2018-01-26 ENCODE 3 ENCFF198WIX 980970162 ENCODE Processing Pipeline 5ac37765951e5af0f040f4e394b2772d https://www.encodeproject.org/files/ENCFF261EZF/@@download/ENCFF261EZF.bigWig GRCh38 released borderline replicate concordance, low read depth experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF150UQM bigWig fold change over control ENCSR431XGJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens PYGO2-human ENCAB882VQT DNA False 2018-01-26 ENCODE 2, 3 ENCFF198WIX, ENCFF293PYL 2025135153 ENCODE Processing Pipeline e90296be38dd86fde82a7cc66217ab51 https://www.encodeproject.org/files/ENCFF150UQM/@@download/ENCFF150UQM.bigWig GRCh38 released borderline replicate concordance, low read depth experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF880SFY bigBed narrowPeak peaks ENCSR431XGJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens PYGO2-human ENCAB882VQT DNA False 2018-01-26 ENCODE 3 ENCFF494VOF 13229449 ENCODE Processing Pipeline 0ba02c62a3849ca72c530d7f9a5dbb7c https://www.encodeproject.org/files/ENCFF880SFY/@@download/ENCFF880SFY.bigBed GRCh38 released borderline replicate concordance, low read depth experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF185XVM bigBed narrowPeak peaks ENCSR431XGJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens PYGO2-human ENCAB882VQT DNA False 2018-01-26 ENCODE 2, 3 ENCFF750CZH 13221036 ENCODE Processing Pipeline 47434b7dbfbc892af461267459e00812 https://www.encodeproject.org/files/ENCFF185XVM/@@download/ENCFF185XVM.bigBed GRCh38 released borderline replicate concordance, low read depth experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF750CZH bed narrowPeak peaks ENCSR431XGJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens PYGO2-human ENCAB882VQT DNA False 2018-01-26 ENCODE 2, 3 ENCFF198WIX, ENCFF293PYL 7125461 ENCODE Processing Pipeline 16d80789ff5cde3098c32557300633e9 https://www.encodeproject.org/files/ENCFF750CZH/@@download/ENCFF750CZH.bed.gz GRCh38 released borderline replicate concordance, low read depth experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF968PVP bigBed narrowPeak peaks ENCSR431XGJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens PYGO2-human ENCAB882VQT DNA False 2018-01-26 ENCODE 2 ENCFF697PXU 11165029 ENCODE Processing Pipeline 44ad6251e6014c50c0d2f0407778bde2 https://www.encodeproject.org/files/ENCFF968PVP/@@download/ENCFF968PVP.bigBed GRCh38 released borderline replicate concordance, low read depth experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF697PXU bed narrowPeak peaks ENCSR431XGJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens PYGO2-human ENCAB882VQT DNA False 2018-01-26 ENCODE 2 ENCFF293PYL 6293987 ENCODE Processing Pipeline a8cb4c7b628dc43b2d67f9278f0993dc https://www.encodeproject.org/files/ENCFF697PXU/@@download/ENCFF697PXU.bed.gz GRCh38 released borderline replicate concordance, low read depth experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF494VOF bed narrowPeak peaks ENCSR431XGJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens PYGO2-human ENCAB882VQT DNA False 2018-01-26 ENCODE 3 ENCFF198WIX 6279709 ENCODE Processing Pipeline 91c4fbaa9b9a6269985032abfcbe9bcc https://www.encodeproject.org/files/ENCFF494VOF/@@download/ENCFF494VOF.bed.gz GRCh38 released borderline replicate concordance, low read depth experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF570XZY bigBed narrowPeak optimal idr thresholded peaks ENCSR431XGJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens PYGO2-human ENCAB882VQT DNA False 2018-01-26 ENCODE 2, 3 ENCFF442XXV 211202 ENCODE Processing Pipeline e464a8d0cc3c05403fb321ce26934377 https://www.encodeproject.org/files/ENCFF570XZY/@@download/ENCFF570XZY.bigBed GRCh38 released borderline replicate concordance, low read depth experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF442XXV bed narrowPeak optimal idr thresholded peaks ENCSR431XGJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens PYGO2-human ENCAB882VQT DNA False 2018-01-26 ENCODE 2, 3 ENCFF419RSJ, ENCFF494VOF, ENCFF697PXU, ENCFF750CZH 82654 ENCODE Processing Pipeline 179c55cb971fe6cb2872ffee6eb0aaf2 https://www.encodeproject.org/files/ENCFF442XXV/@@download/ENCFF442XXV.bed.gz GRCh38 released borderline replicate concordance, low read depth experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF091EWT bed narrowPeak conservative idr thresholded peaks ENCSR431XGJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens PYGO2-human ENCAB882VQT DNA False 2018-01-26 ENCODE 2, 3 ENCFF419RSJ, ENCFF494VOF, ENCFF697PXU, ENCFF750CZH 40028 ENCODE Processing Pipeline c88bb1d36f22f5f63517a1a50d477c6d https://www.encodeproject.org/files/ENCFF091EWT/@@download/ENCFF091EWT.bed.gz GRCh38 released borderline replicate concordance, low read depth experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF955FVO bigBed narrowPeak conservative idr thresholded peaks ENCSR431XGJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens PYGO2-human ENCAB882VQT DNA False 2018-01-26 ENCODE 2, 3 ENCFF091EWT 141763 ENCODE Processing Pipeline 5bdc0298b9d896324d09028038cbb780 https://www.encodeproject.org/files/ENCFF955FVO/@@download/ENCFF955FVO.bigBed GRCh38 released borderline replicate concordance, low read depth experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF523HKB bigBed narrowPeak conservative idr thresholded peaks ENCSR431XGJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens PYGO2-human ENCAB882VQT DNA False 2018-01-26 ENCODE 2, 3 ENCFF915CYM 109617 ENCODE Processing Pipeline 3aa919771f5e9f5047afcf6f0749e3eb https://www.encodeproject.org/files/ENCFF523HKB/@@download/ENCFF523HKB.bigBed hg19 released borderline replicate concordance, low read depth experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF915CYM bed narrowPeak conservative idr thresholded peaks ENCSR431XGJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens PYGO2-human ENCAB882VQT DNA False 2018-01-26 ENCODE 2, 3 ENCFF001TDO, ENCFF078LXS, ENCFF087NBH, ENCFF268LPT 32337 ENCODE Processing Pipeline 73d54e88b0afee4fcc960c6c1e6c6aee https://www.encodeproject.org/files/ENCFF915CYM/@@download/ENCFF915CYM.bed.gz hg19 released borderline replicate concordance, low read depth experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF421KIV bed narrowPeak optimal idr thresholded peaks ENCSR431XGJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens PYGO2-human ENCAB882VQT DNA False 2018-01-26 ENCODE 2, 3 ENCFF001TDO, ENCFF078LXS, ENCFF087NBH, ENCFF268LPT 66575 ENCODE Processing Pipeline 0da245067c2c9c95999d81f57436fdd0 https://www.encodeproject.org/files/ENCFF421KIV/@@download/ENCFF421KIV.bed.gz hg19 released borderline replicate concordance, low read depth experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF694DGU bigBed narrowPeak optimal idr thresholded peaks ENCSR431XGJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens PYGO2-human ENCAB882VQT DNA False 2018-01-26 ENCODE 2, 3 ENCFF421KIV 156074 ENCODE Processing Pipeline 685fc87c178b41848d995c6a1641ff71 https://www.encodeproject.org/files/ENCFF694DGU/@@download/ENCFF694DGU.bigBed hg19 released borderline replicate concordance, low read depth experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF944NSS bam unfiltered alignments ENCSR177XCS ChIP-seq EFO:0002067 K562 cell line Homo sapiens BRD9-human ENCAB307OWA DNA False 2018-01-26 ENCODE 1 100 ENCFF700CIV, ENCFF807MUK, ENCFF872XVD 3694222629 ENCODE Processing Pipeline d18a260e94f041fb7e699506373d1b85 https://www.encodeproject.org/files/ENCFF944NSS/@@download/ENCFF944NSS.bam hg19 released low read depth experiment not submitted to GEO partially characterized antibody ENCFF131ZCY bam unfiltered alignments ENCSR177XCS ChIP-seq EFO:0002067 K562 cell line Homo sapiens BRD9-human ENCAB307OWA DNA False 2018-01-26 ENCODE 2 100 ENCFF373VRZ, ENCFF539YNG, ENCFF807MUK 4800295580 ENCODE Processing Pipeline fe9ca20a305b798c3eddaf4fa6306460 https://www.encodeproject.org/files/ENCFF131ZCY/@@download/ENCFF131ZCY.bam hg19 released low read depth experiment not submitted to GEO partially characterized antibody ENCFF872XVD fastq reads ENCSR177XCS ChIP-seq EFO:0002067 K562 cell line Homo sapiens BRD9-human ENCAB307OWA DNA False 2018-01-26 ENCODE 1 1 100 paired-ended 2 ENCFF700CIV 1698674404 Michael Snyder, Stanford b921c474256a64458c26538378e75ce1 https://www.encodeproject.org/files/ENCFF872XVD/@@download/ENCFF872XVD.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFH/ released low read depth experiment not submitted to GEO partially characterized antibody ENCFF373VRZ fastq reads ENCSR177XCS ChIP-seq EFO:0002067 K562 cell line Homo sapiens BRD9-human ENCAB307OWA DNA False 2018-01-26 ENCODE 2 1 100 paired-ended 1 ENCFF539YNG 2157287224 Michael Snyder, Stanford 62909d16069d4939df16bf25d8c1d10f https://www.encodeproject.org/files/ENCFF373VRZ/@@download/ENCFF373VRZ.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFD/ released low read depth experiment not submitted to GEO partially characterized antibody ENCFF700CIV fastq reads ENCSR177XCS ChIP-seq EFO:0002067 K562 cell line Homo sapiens BRD9-human ENCAB307OWA DNA False 2018-01-26 ENCODE 1 1 100 paired-ended 1 ENCFF872XVD 1664027145 Michael Snyder, Stanford 43693f19c6fb5507ffa367f30ba2c503 https://www.encodeproject.org/files/ENCFF700CIV/@@download/ENCFF700CIV.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFF/ released low read depth experiment not submitted to GEO partially characterized antibody ENCFF539YNG fastq reads ENCSR177XCS ChIP-seq EFO:0002067 K562 cell line Homo sapiens BRD9-human ENCAB307OWA DNA False 2018-01-26 ENCODE 2 1 100 paired-ended 2 ENCFF373VRZ 2197906493 Michael Snyder, Stanford 0532a6f938308915a48c5b58fdb8f8fa https://www.encodeproject.org/files/ENCFF539YNG/@@download/ENCFF539YNG.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFA/ released low read depth experiment not submitted to GEO partially characterized antibody ENCFF717XED bam alignments ENCSR177XCS ChIP-seq EFO:0002067 K562 cell line Homo sapiens BRD9-human ENCAB307OWA DNA False 2018-01-26 ENCODE 1 100 ENCFF700CIV, ENCFF807MUK, ENCFF872XVD 3065959793 ENCODE Processing Pipeline c1cb3184267ecca58f0fef7027aed2e8 https://www.encodeproject.org/files/ENCFF717XED/@@download/ENCFF717XED.bam hg19 released low read depth experiment not submitted to GEO partially characterized antibody ENCFF643WDX bam alignments ENCSR177XCS ChIP-seq EFO:0002067 K562 cell line Homo sapiens BRD9-human ENCAB307OWA DNA False 2018-01-26 ENCODE 2 100 ENCFF373VRZ, ENCFF539YNG, ENCFF807MUK 4180295807 ENCODE Processing Pipeline ec27df3ac2919b7cfacc40b384376bc1 https://www.encodeproject.org/files/ENCFF643WDX/@@download/ENCFF643WDX.bam hg19 released low read depth experiment not submitted to GEO partially characterized antibody ENCFF564FZT bigWig signal p-value ENCSR177XCS ChIP-seq EFO:0002067 K562 cell line Homo sapiens BRD9-human ENCAB307OWA DNA False 2018-01-26 ENCODE 1 ENCFF581ZJL, ENCFF717XED 891022789 ENCODE Processing Pipeline 1367f8889a957424b6d26866f81752d9 https://www.encodeproject.org/files/ENCFF564FZT/@@download/ENCFF564FZT.bigWig hg19 released low read depth experiment not submitted to GEO partially characterized antibody ENCFF228PUI bigBed narrowPeak peaks ENCSR177XCS ChIP-seq EFO:0002067 K562 cell line Homo sapiens BRD9-human ENCAB307OWA DNA False 2018-01-26 ENCODE 2 ENCFF827TVA 13173924 ENCODE Processing Pipeline 8f9f8ea9550d704c28354efd831c96ce https://www.encodeproject.org/files/ENCFF228PUI/@@download/ENCFF228PUI.bigBed hg19 released low read depth experiment not submitted to GEO partially characterized antibody ENCFF836LAD bigBed narrowPeak peaks ENCSR177XCS ChIP-seq EFO:0002067 K562 cell line Homo sapiens BRD9-human ENCAB307OWA DNA False 2018-01-26 ENCODE 1, 2 ENCFF155ELE 12951372 ENCODE Processing Pipeline 122848624105422b9d05085aa703af0e https://www.encodeproject.org/files/ENCFF836LAD/@@download/ENCFF836LAD.bigBed hg19 released low read depth experiment not submitted to GEO partially characterized antibody ENCFF036WGZ bigWig fold change over control ENCSR177XCS ChIP-seq EFO:0002067 K562 cell line Homo sapiens BRD9-human ENCAB307OWA DNA False 2018-01-26 ENCODE 1, 2 ENCFF051LWI, ENCFF581ZJL, ENCFF643WDX, ENCFF717XED 1990599793 ENCODE Processing Pipeline 109b39cd5d297ad5cbe13e00a7abd7ca https://www.encodeproject.org/files/ENCFF036WGZ/@@download/ENCFF036WGZ.bigWig hg19 released low read depth experiment not submitted to GEO partially characterized antibody ENCFF840HCT bigBed narrowPeak peaks ENCSR177XCS ChIP-seq EFO:0002067 K562 cell line Homo sapiens BRD9-human ENCAB307OWA DNA False 2018-01-26 ENCODE 1 ENCFF794YNX 13178917 ENCODE Processing Pipeline 254cfde60a5566c2abb16e9f54942511 https://www.encodeproject.org/files/ENCFF840HCT/@@download/ENCFF840HCT.bigBed hg19 released low read depth experiment not submitted to GEO partially characterized antibody ENCFF787SKU bigWig signal p-value ENCSR177XCS ChIP-seq EFO:0002067 K562 cell line Homo sapiens BRD9-human ENCAB307OWA DNA False 2018-01-26 ENCODE 1, 2 ENCFF051LWI, ENCFF581ZJL, ENCFF643WDX, ENCFF717XED 1883839471 ENCODE Processing Pipeline 30d6fe4e3679987847f25a1aa11c14c9 https://www.encodeproject.org/files/ENCFF787SKU/@@download/ENCFF787SKU.bigWig hg19 released low read depth experiment not submitted to GEO partially characterized antibody ENCFF554MUB bigWig fold change over control ENCSR177XCS ChIP-seq EFO:0002067 K562 cell line Homo sapiens BRD9-human ENCAB307OWA DNA False 2018-01-26 ENCODE 2 ENCFF051LWI, ENCFF643WDX 1109030909 ENCODE Processing Pipeline 1942cd43c209a3a6a3d8d0c01d9011ad https://www.encodeproject.org/files/ENCFF554MUB/@@download/ENCFF554MUB.bigWig hg19 released low read depth experiment not submitted to GEO partially characterized antibody ENCFF155ELE bed narrowPeak peaks ENCSR177XCS ChIP-seq EFO:0002067 K562 cell line Homo sapiens BRD9-human ENCAB307OWA DNA False 2018-01-26 ENCODE 1, 2 ENCFF051LWI, ENCFF581ZJL, ENCFF643WDX, ENCFF717XED 7244647 ENCODE Processing Pipeline e15a0f9b9da61d5fbde8b591dba53203 https://www.encodeproject.org/files/ENCFF155ELE/@@download/ENCFF155ELE.bed.gz hg19 released low read depth experiment not submitted to GEO partially characterized antibody ENCFF399WFE bigWig signal p-value ENCSR177XCS ChIP-seq EFO:0002067 K562 cell line Homo sapiens BRD9-human ENCAB307OWA DNA False 2018-01-26 ENCODE 2 ENCFF051LWI, ENCFF643WDX 946584089 ENCODE Processing Pipeline dc87d3fccbd0bec84831a67161d2fdc0 https://www.encodeproject.org/files/ENCFF399WFE/@@download/ENCFF399WFE.bigWig hg19 released low read depth experiment not submitted to GEO partially characterized antibody ENCFF212VNB bigWig fold change over control ENCSR177XCS ChIP-seq EFO:0002067 K562 cell line Homo sapiens BRD9-human ENCAB307OWA DNA False 2018-01-26 ENCODE 1 ENCFF581ZJL, ENCFF717XED 971376862 ENCODE Processing Pipeline 14ae655b16a1c2db26d56ad33a0f53f4 https://www.encodeproject.org/files/ENCFF212VNB/@@download/ENCFF212VNB.bigWig hg19 released low read depth experiment not submitted to GEO partially characterized antibody ENCFF794YNX bed narrowPeak peaks ENCSR177XCS ChIP-seq EFO:0002067 K562 cell line Homo sapiens BRD9-human ENCAB307OWA DNA False 2018-01-26 ENCODE 1 ENCFF581ZJL, ENCFF717XED 6741435 ENCODE Processing Pipeline e0a0cb8650826c0fd9877d30d8a8bb4c https://www.encodeproject.org/files/ENCFF794YNX/@@download/ENCFF794YNX.bed.gz hg19 released low read depth experiment not submitted to GEO partially characterized antibody ENCFF827TVA bed narrowPeak peaks ENCSR177XCS ChIP-seq EFO:0002067 K562 cell line Homo sapiens BRD9-human ENCAB307OWA DNA False 2018-01-26 ENCODE 2 ENCFF051LWI, ENCFF643WDX 6823194 ENCODE Processing Pipeline f99e6433e27c7d123a4ea6d6aa1212e1 https://www.encodeproject.org/files/ENCFF827TVA/@@download/ENCFF827TVA.bed.gz hg19 released low read depth experiment not submitted to GEO partially characterized antibody ENCFF558AOF bam unfiltered alignments ENCSR177XCS ChIP-seq EFO:0002067 K562 cell line Homo sapiens BRD9-human ENCAB307OWA DNA False 2018-01-26 ENCODE 1 100 ENCFF643CGH, ENCFF700CIV, ENCFF872XVD 3697643431 ENCODE Processing Pipeline 2a702e4d3dd666bfe72b1c5310802656 https://www.encodeproject.org/files/ENCFF558AOF/@@download/ENCFF558AOF.bam GRCh38 released low read depth experiment not submitted to GEO partially characterized antibody ENCFF110WHO bam unfiltered alignments ENCSR177XCS ChIP-seq EFO:0002067 K562 cell line Homo sapiens BRD9-human ENCAB307OWA DNA False 2018-01-26 ENCODE 2 100 ENCFF373VRZ, ENCFF539YNG, ENCFF643CGH 4805431360 ENCODE Processing Pipeline 722c6d0acf68d673165c905f5899201d https://www.encodeproject.org/files/ENCFF110WHO/@@download/ENCFF110WHO.bam GRCh38 released low read depth experiment not submitted to GEO partially characterized antibody ENCFF410BXB bam alignments ENCSR177XCS ChIP-seq EFO:0002067 K562 cell line Homo sapiens BRD9-human ENCAB307OWA DNA False 2018-01-26 ENCODE 1 100 ENCFF643CGH, ENCFF700CIV, ENCFF872XVD 3067689560 ENCODE Processing Pipeline 71a655fc78b13476690061e971937f5d https://www.encodeproject.org/files/ENCFF410BXB/@@download/ENCFF410BXB.bam GRCh38 released low read depth experiment not submitted to GEO partially characterized antibody ENCFF287QPE bam alignments ENCSR177XCS ChIP-seq EFO:0002067 K562 cell line Homo sapiens BRD9-human ENCAB307OWA DNA False 2018-01-26 ENCODE 2 100 ENCFF373VRZ, ENCFF539YNG, ENCFF643CGH 4182774140 ENCODE Processing Pipeline 024239acb2dabd9010c520596ee7fd6c https://www.encodeproject.org/files/ENCFF287QPE/@@download/ENCFF287QPE.bam GRCh38 released low read depth experiment not submitted to GEO partially characterized antibody ENCFF103BTF bigWig signal p-value ENCSR177XCS ChIP-seq EFO:0002067 K562 cell line Homo sapiens BRD9-human ENCAB307OWA DNA False 2018-01-26 ENCODE 1 ENCFF410BXB, ENCFF910IKB 1075300066 ENCODE Processing Pipeline 6560db90f34a09fc53a1be45b53b585c https://www.encodeproject.org/files/ENCFF103BTF/@@download/ENCFF103BTF.bigWig GRCh38 released low read depth experiment not submitted to GEO partially characterized antibody ENCFF785BTG bigWig signal p-value ENCSR177XCS ChIP-seq EFO:0002067 K562 cell line Homo sapiens BRD9-human ENCAB307OWA DNA False 2018-01-26 ENCODE 2 ENCFF227IZS, ENCFF287QPE 1167470627 ENCODE Processing Pipeline 2432c1d3fdf644cb03939decb0c6dc0e https://www.encodeproject.org/files/ENCFF785BTG/@@download/ENCFF785BTG.bigWig GRCh38 released low read depth experiment not submitted to GEO partially characterized antibody ENCFF106PKZ bigWig signal p-value ENCSR177XCS ChIP-seq EFO:0002067 K562 cell line Homo sapiens BRD9-human ENCAB307OWA DNA False 2018-01-26 ENCODE 1, 2 ENCFF227IZS, ENCFF287QPE, ENCFF410BXB, ENCFF910IKB 1667653490 ENCODE Processing Pipeline f323bdb01d17039dde2a013828323043 https://www.encodeproject.org/files/ENCFF106PKZ/@@download/ENCFF106PKZ.bigWig GRCh38 released low read depth experiment not submitted to GEO partially characterized antibody ENCFF799LCC bigWig fold change over control ENCSR177XCS ChIP-seq EFO:0002067 K562 cell line Homo sapiens BRD9-human ENCAB307OWA DNA False 2018-01-26 ENCODE 1 ENCFF410BXB, ENCFF910IKB 972698866 ENCODE Processing Pipeline 3b0992958ec31adc595bdeac08446e9c https://www.encodeproject.org/files/ENCFF799LCC/@@download/ENCFF799LCC.bigWig GRCh38 released low read depth experiment not submitted to GEO partially characterized antibody ENCFF979VFT bigWig fold change over control ENCSR177XCS ChIP-seq EFO:0002067 K562 cell line Homo sapiens BRD9-human ENCAB307OWA DNA False 2018-01-26 ENCODE 2 ENCFF227IZS, ENCFF287QPE 1125096164 ENCODE Processing Pipeline cbef349afc47210616d203829b35215e https://www.encodeproject.org/files/ENCFF979VFT/@@download/ENCFF979VFT.bigWig GRCh38 released low read depth experiment not submitted to GEO partially characterized antibody ENCFF802JFC bigWig fold change over control ENCSR177XCS ChIP-seq EFO:0002067 K562 cell line Homo sapiens BRD9-human ENCAB307OWA DNA False 2018-01-26 ENCODE 1, 2 ENCFF227IZS, ENCFF287QPE, ENCFF410BXB, ENCFF910IKB 1980484589 ENCODE Processing Pipeline d266267746e8db19ea0c2d50758b77b5 https://www.encodeproject.org/files/ENCFF802JFC/@@download/ENCFF802JFC.bigWig GRCh38 released low read depth experiment not submitted to GEO partially characterized antibody ENCFF687UOI bed narrowPeak peaks ENCSR177XCS ChIP-seq EFO:0002067 K562 cell line Homo sapiens BRD9-human ENCAB307OWA DNA False 2018-01-26 ENCODE 1 ENCFF410BXB, ENCFF910IKB 6611781 ENCODE Processing Pipeline af5316a233736a85e16190b20be88b07 https://www.encodeproject.org/files/ENCFF687UOI/@@download/ENCFF687UOI.bed.gz GRCh38 released low read depth experiment not submitted to GEO partially characterized antibody ENCFF008UNG bed narrowPeak peaks ENCSR177XCS ChIP-seq EFO:0002067 K562 cell line Homo sapiens BRD9-human ENCAB307OWA DNA False 2018-01-26 ENCODE 2 ENCFF227IZS, ENCFF287QPE 6728602 ENCODE Processing Pipeline c77c5623bcb4aba40bbbfc37a71dd08e https://www.encodeproject.org/files/ENCFF008UNG/@@download/ENCFF008UNG.bed.gz GRCh38 released low read depth experiment not submitted to GEO partially characterized antibody ENCFF461WWC bed narrowPeak peaks ENCSR177XCS ChIP-seq EFO:0002067 K562 cell line Homo sapiens BRD9-human ENCAB307OWA DNA False 2018-01-26 ENCODE 1, 2 ENCFF227IZS, ENCFF287QPE, ENCFF410BXB, ENCFF910IKB 7223320 ENCODE Processing Pipeline cb5870b2623d26785126412e7f25bae4 https://www.encodeproject.org/files/ENCFF461WWC/@@download/ENCFF461WWC.bed.gz GRCh38 released low read depth experiment not submitted to GEO partially characterized antibody ENCFF453NTS bigBed narrowPeak peaks ENCSR177XCS ChIP-seq EFO:0002067 K562 cell line Homo sapiens BRD9-human ENCAB307OWA DNA False 2018-01-26 ENCODE 1 ENCFF687UOI 13170805 ENCODE Processing Pipeline 3c81c9cc8a6d5b72d7103022e4a55f03 https://www.encodeproject.org/files/ENCFF453NTS/@@download/ENCFF453NTS.bigBed GRCh38 released low read depth experiment not submitted to GEO partially characterized antibody ENCFF736YBR bigBed narrowPeak peaks ENCSR177XCS ChIP-seq EFO:0002067 K562 cell line Homo sapiens BRD9-human ENCAB307OWA DNA False 2018-01-26 ENCODE 2 ENCFF008UNG 13175673 ENCODE Processing Pipeline e80d4404a988c2d999ac415e22f4d8af https://www.encodeproject.org/files/ENCFF736YBR/@@download/ENCFF736YBR.bigBed GRCh38 released low read depth experiment not submitted to GEO partially characterized antibody ENCFF397MIX bigBed narrowPeak peaks ENCSR177XCS ChIP-seq EFO:0002067 K562 cell line Homo sapiens BRD9-human ENCAB307OWA DNA False 2018-01-26 ENCODE 1, 2 ENCFF461WWC 12949458 ENCODE Processing Pipeline bf59ad32ee39336721bff8b385952957 https://www.encodeproject.org/files/ENCFF397MIX/@@download/ENCFF397MIX.bigBed GRCh38 released low read depth experiment not submitted to GEO partially characterized antibody ENCFF313PGK bed narrowPeak conservative idr thresholded peaks ENCSR177XCS ChIP-seq EFO:0002067 K562 cell line Homo sapiens BRD9-human ENCAB307OWA DNA False 2018-01-26 ENCODE 1, 2 ENCFF008UNG, ENCFF419RSJ, ENCFF461WWC, ENCFF687UOI 237920 ENCODE Processing Pipeline d0787ff250a76f9dc5cc0ae209069bfa https://www.encodeproject.org/files/ENCFF313PGK/@@download/ENCFF313PGK.bed.gz GRCh38 released low read depth experiment not submitted to GEO partially characterized antibody ENCFF551OSB bigBed narrowPeak conservative idr thresholded peaks ENCSR177XCS ChIP-seq EFO:0002067 K562 cell line Homo sapiens BRD9-human ENCAB307OWA DNA False 2018-01-26 ENCODE 1, 2 ENCFF313PGK 596197 ENCODE Processing Pipeline 17a9a870864db3bf5aeb756403aeff50 https://www.encodeproject.org/files/ENCFF551OSB/@@download/ENCFF551OSB.bigBed GRCh38 released low read depth experiment not submitted to GEO partially characterized antibody ENCFF411RMT bed narrowPeak optimal idr thresholded peaks ENCSR177XCS ChIP-seq EFO:0002067 K562 cell line Homo sapiens BRD9-human ENCAB307OWA DNA False 2018-01-26 ENCODE 1, 2 ENCFF008UNG, ENCFF419RSJ, ENCFF461WWC, ENCFF687UOI 329819 ENCODE Processing Pipeline c14385af75e35a2fd5161c33948d6f59 https://www.encodeproject.org/files/ENCFF411RMT/@@download/ENCFF411RMT.bed.gz GRCh38 released low read depth experiment not submitted to GEO partially characterized antibody ENCFF546AAY bigBed narrowPeak optimal idr thresholded peaks ENCSR177XCS ChIP-seq EFO:0002067 K562 cell line Homo sapiens BRD9-human ENCAB307OWA DNA False 2018-01-26 ENCODE 1, 2 ENCFF411RMT 774582 ENCODE Processing Pipeline 010b2ea43588d80d51db4abb207b6933 https://www.encodeproject.org/files/ENCFF546AAY/@@download/ENCFF546AAY.bigBed GRCh38 released low read depth experiment not submitted to GEO partially characterized antibody ENCFF666LZV bed narrowPeak optimal idr thresholded peaks ENCSR177XCS ChIP-seq EFO:0002067 K562 cell line Homo sapiens BRD9-human ENCAB307OWA DNA False 2018-01-26 ENCODE 1, 2 ENCFF001TDO, ENCFF155ELE, ENCFF794YNX, ENCFF827TVA 288183 ENCODE Processing Pipeline 26b2fd0f0f7be3a533a5d97eef32e3d3 https://www.encodeproject.org/files/ENCFF666LZV/@@download/ENCFF666LZV.bed.gz hg19 released low read depth experiment not submitted to GEO partially characterized antibody ENCFF619FWQ bigBed narrowPeak conservative idr thresholded peaks ENCSR177XCS ChIP-seq EFO:0002067 K562 cell line Homo sapiens BRD9-human ENCAB307OWA DNA False 2018-01-26 ENCODE 1, 2 ENCFF148RRJ 362888 ENCODE Processing Pipeline 0d2b851d8732be9282a1ec8640833f27 https://www.encodeproject.org/files/ENCFF619FWQ/@@download/ENCFF619FWQ.bigBed hg19 released low read depth experiment not submitted to GEO partially characterized antibody ENCFF449EMH bigBed narrowPeak optimal idr thresholded peaks ENCSR177XCS ChIP-seq EFO:0002067 K562 cell line Homo sapiens BRD9-human ENCAB307OWA DNA False 2018-01-26 ENCODE 1, 2 ENCFF666LZV 593916 ENCODE Processing Pipeline 1ed676742f024f84b8a4e8b4ead263a8 https://www.encodeproject.org/files/ENCFF449EMH/@@download/ENCFF449EMH.bigBed hg19 released low read depth experiment not submitted to GEO partially characterized antibody ENCFF148RRJ bed narrowPeak conservative idr thresholded peaks ENCSR177XCS ChIP-seq EFO:0002067 K562 cell line Homo sapiens BRD9-human ENCAB307OWA DNA False 2018-01-26 ENCODE 1, 2 ENCFF001TDO, ENCFF155ELE, ENCFF794YNX, ENCFF827TVA 191476 ENCODE Processing Pipeline f3cd0079b53fea9ab706394a45a8b899 https://www.encodeproject.org/files/ENCFF148RRJ/@@download/ENCFF148RRJ.bed.gz hg19 released low read depth experiment not submitted to GEO partially characterized antibody ENCFF169CRK fastq reads ENCSR028UIU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF3-human ENCAB548QXS DNA False 2016-07-08 ENCODE 2 1 100 paired-ended 2 ENCFF367HUF 3742580635 Michael Snyder, Stanford 8e04ff86b79e7b126458d7ab5666551c https://www.encodeproject.org/files/ENCFF169CRK/@@download/ENCFF169CRK.fastq.gz Illumina HiSeq 4000 /files/ENCFF837MIV/ released inconsistent platforms, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF457RYN fastq reads ENCSR028UIU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF3-human ENCAB548QXS DNA False 2016-07-08 ENCODE 1 1 100 paired-ended 1 ENCFF126JWD 2988597444 Michael Snyder, Stanford b86090b4e75177f5ffc10ebbe4402877 https://www.encodeproject.org/files/ENCFF457RYN/@@download/ENCFF457RYN.fastq.gz Illumina HiSeq 4000 /files/ENCFF498JMO/ released inconsistent platforms, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF126JWD fastq reads ENCSR028UIU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF3-human ENCAB548QXS DNA False 2016-07-08 ENCODE 1 1 100 paired-ended 2 ENCFF457RYN 3153791741 Michael Snyder, Stanford 4a0f8ed1f360387eab04db889f1ec823 https://www.encodeproject.org/files/ENCFF126JWD/@@download/ENCFF126JWD.fastq.gz Illumina HiSeq 4000 /files/ENCFF502GTS/ released inconsistent platforms, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF367HUF fastq reads ENCSR028UIU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF3-human ENCAB548QXS DNA False 2016-07-08 ENCODE 2 1 100 paired-ended 1 ENCFF169CRK 3456593142 Michael Snyder, Stanford 1367bd682ec1fc6eea2a14610e404c39 https://www.encodeproject.org/files/ENCFF367HUF/@@download/ENCFF367HUF.fastq.gz Illumina HiSeq 4000 /files/ENCFF259GQA/ released inconsistent platforms, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF373DUA bam alignments ENCSR028UIU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF3-human ENCAB548QXS DNA False 2016-07-08 ENCODE 1 100 ENCFF126JWD, ENCFF457RYN, ENCFF643CGH 4122423719 ENCODE Processing Pipeline b5928c78d4c91b4b39990476a19e4d7b https://www.encodeproject.org/files/ENCFF373DUA/@@download/ENCFF373DUA.bam GRCh38 released inconsistent platforms, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF214HPX bam unfiltered alignments ENCSR028UIU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF3-human ENCAB548QXS DNA False 2016-07-08 ENCODE 1 100 ENCFF126JWD, ENCFF457RYN, ENCFF643CGH 5804657468 ENCODE Processing Pipeline 94a47bead20a640e5554dcbd1ff7c7c1 https://www.encodeproject.org/files/ENCFF214HPX/@@download/ENCFF214HPX.bam GRCh38 released inconsistent platforms, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF382QTB bam alignments ENCSR028UIU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF3-human ENCAB548QXS DNA False 2016-07-08 ENCODE 2 100 ENCFF169CRK, ENCFF367HUF, ENCFF643CGH 4036680207 ENCODE Processing Pipeline ea502aa95c6b1d7f39d2923e7f7e1a36 https://www.encodeproject.org/files/ENCFF382QTB/@@download/ENCFF382QTB.bam GRCh38 released inconsistent platforms, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF420AYY bam unfiltered alignments ENCSR028UIU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF3-human ENCAB548QXS DNA False 2016-07-08 ENCODE 2 100 ENCFF169CRK, ENCFF367HUF, ENCFF643CGH 6369616293 ENCODE Processing Pipeline 43c0019495dc12157fc7c2880ae125dd https://www.encodeproject.org/files/ENCFF420AYY/@@download/ENCFF420AYY.bam GRCh38 released inconsistent platforms, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF606TFQ bam unfiltered alignments ENCSR028UIU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF3-human ENCAB548QXS DNA False 2016-07-08 ENCODE 2 100 ENCFF169CRK, ENCFF367HUF, ENCFF807MUK 6366430448 ENCODE Processing Pipeline 4777fe94afa49ebb9d39f0ba9015f97e https://www.encodeproject.org/files/ENCFF606TFQ/@@download/ENCFF606TFQ.bam hg19 released inconsistent platforms, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF220SOG bam unfiltered alignments ENCSR028UIU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF3-human ENCAB548QXS DNA False 2016-07-08 ENCODE 1 100 ENCFF126JWD, ENCFF457RYN, ENCFF807MUK 5798310846 ENCODE Processing Pipeline 743e63d40ea7189bdbcef0e3c2a9348d https://www.encodeproject.org/files/ENCFF220SOG/@@download/ENCFF220SOG.bam hg19 released inconsistent platforms, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF512OEJ bam alignments ENCSR028UIU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF3-human ENCAB548QXS DNA False 2016-07-08 ENCODE 2 100 ENCFF169CRK, ENCFF367HUF, ENCFF807MUK 4035172019 ENCODE Processing Pipeline 987d6216bf3c30b78f77f638e7184106 https://www.encodeproject.org/files/ENCFF512OEJ/@@download/ENCFF512OEJ.bam hg19 released inconsistent platforms, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF478OFO bam alignments ENCSR028UIU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF3-human ENCAB548QXS DNA False 2016-07-08 ENCODE 1 100 ENCFF126JWD, ENCFF457RYN, ENCFF807MUK 4120415067 ENCODE Processing Pipeline 5544eda7d5dee708a8f2a991e22da0a9 https://www.encodeproject.org/files/ENCFF478OFO/@@download/ENCFF478OFO.bam hg19 released inconsistent platforms, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF466TUD bigWig signal p-value ENCSR028UIU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF3-human ENCAB548QXS DNA False 2016-07-08 ENCODE 1 ENCFF373DUA, ENCFF790TAN 1037386107 ENCODE Processing Pipeline f52e3e4f367d7f62ab21c19ca4c4e961 https://www.encodeproject.org/files/ENCFF466TUD/@@download/ENCFF466TUD.bigWig GRCh38 released inconsistent platforms, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF830BDI bigWig signal p-value ENCSR028UIU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF3-human ENCAB548QXS DNA False 2016-07-08 ENCODE 1 ENCFF160VXC, ENCFF478OFO 1278470087 ENCODE Processing Pipeline 392e3f806e896b4b704bf6b15f6759e2 https://www.encodeproject.org/files/ENCFF830BDI/@@download/ENCFF830BDI.bigWig hg19 released inconsistent platforms, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF802GSI bigWig fold change over control ENCSR028UIU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF3-human ENCAB548QXS DNA False 2016-07-08 ENCODE 1 ENCFF373DUA, ENCFF790TAN 1417671128 ENCODE Processing Pipeline 0257ebfbb356a95bc4b323ebc11f8d36 https://www.encodeproject.org/files/ENCFF802GSI/@@download/ENCFF802GSI.bigWig GRCh38 released inconsistent platforms, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF214WAD bigWig fold change over control ENCSR028UIU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF3-human ENCAB548QXS DNA False 2016-07-08 ENCODE 1 ENCFF160VXC, ENCFF478OFO 1401639751 ENCODE Processing Pipeline 9454c092fade19500bf3de624b5db7ca https://www.encodeproject.org/files/ENCFF214WAD/@@download/ENCFF214WAD.bigWig hg19 released inconsistent platforms, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF255XDG bigWig signal p-value ENCSR028UIU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF3-human ENCAB548QXS DNA False 2016-07-08 ENCODE 2 ENCFF382QTB, ENCFF712WXB 1098093658 ENCODE Processing Pipeline 024de5fca280902b7f7b582d67ee2f08 https://www.encodeproject.org/files/ENCFF255XDG/@@download/ENCFF255XDG.bigWig GRCh38 released inconsistent platforms, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF098NBC bigWig signal p-value ENCSR028UIU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF3-human ENCAB548QXS DNA False 2016-07-08 ENCODE 2 ENCFF512OEJ, ENCFF834TUP 1372257042 ENCODE Processing Pipeline ba619b6f04eeaeb79e7f90de2553ae2e https://www.encodeproject.org/files/ENCFF098NBC/@@download/ENCFF098NBC.bigWig hg19 released inconsistent platforms, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF131RIX bigWig signal p-value ENCSR028UIU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF3-human ENCAB548QXS DNA False 2016-07-08 ENCODE 1, 2 ENCFF373DUA, ENCFF382QTB, ENCFF712WXB, ENCFF790TAN 2167879310 ENCODE Processing Pipeline 855615e905ebd2860ad22ddadb97e028 https://www.encodeproject.org/files/ENCFF131RIX/@@download/ENCFF131RIX.bigWig GRCh38 released inconsistent platforms, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF594WSC bigWig signal p-value ENCSR028UIU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF3-human ENCAB548QXS DNA False 2016-07-08 ENCODE 1, 2 ENCFF160VXC, ENCFF478OFO, ENCFF512OEJ, ENCFF834TUP 2039391490 ENCODE Processing Pipeline 398e4a17feef766e3a580c5ac14c9bf1 https://www.encodeproject.org/files/ENCFF594WSC/@@download/ENCFF594WSC.bigWig hg19 released inconsistent platforms, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF139ZAI bigWig fold change over control ENCSR028UIU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF3-human ENCAB548QXS DNA False 2016-07-08 ENCODE 2 ENCFF512OEJ, ENCFF834TUP 1409753238 ENCODE Processing Pipeline 6dc589b7fc2953429e850aab8779fdb0 https://www.encodeproject.org/files/ENCFF139ZAI/@@download/ENCFF139ZAI.bigWig hg19 released inconsistent platforms, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF096KZD bigWig fold change over control ENCSR028UIU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF3-human ENCAB548QXS DNA False 2016-07-08 ENCODE 2 ENCFF382QTB, ENCFF712WXB 1409908134 ENCODE Processing Pipeline 2b22ef8db61e2025b274b84bcb2b8a1f https://www.encodeproject.org/files/ENCFF096KZD/@@download/ENCFF096KZD.bigWig GRCh38 released inconsistent platforms, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF783IOJ bigWig fold change over control ENCSR028UIU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF3-human ENCAB548QXS DNA False 2016-07-08 ENCODE 1, 2 ENCFF160VXC, ENCFF478OFO, ENCFF512OEJ, ENCFF834TUP 2334099370 ENCODE Processing Pipeline bf43d4691a6be24de102ecfd370bc240 https://www.encodeproject.org/files/ENCFF783IOJ/@@download/ENCFF783IOJ.bigWig hg19 released inconsistent platforms, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF263MQY bed narrowPeak peaks ENCSR028UIU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF3-human ENCAB548QXS DNA False 2016-07-08 ENCODE 1 ENCFF160VXC, ENCFF478OFO 7015651 ENCODE Processing Pipeline 9dafa63525ad4fba374d03ff634f5cdd https://www.encodeproject.org/files/ENCFF263MQY/@@download/ENCFF263MQY.bed.gz hg19 released inconsistent platforms, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF481PMC bigWig fold change over control ENCSR028UIU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF3-human ENCAB548QXS DNA False 2016-07-08 ENCODE 1, 2 ENCFF373DUA, ENCFF382QTB, ENCFF712WXB, ENCFF790TAN 2345702691 ENCODE Processing Pipeline 57e6aec9b6ac4a15a64061e4798e4b81 https://www.encodeproject.org/files/ENCFF481PMC/@@download/ENCFF481PMC.bigWig GRCh38 released inconsistent platforms, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF164BVB bed narrowPeak peaks ENCSR028UIU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF3-human ENCAB548QXS DNA False 2016-07-08 ENCODE 2 ENCFF512OEJ, ENCFF834TUP 7021524 ENCODE Processing Pipeline f0b86a668bd367ffc7369bf13feb85fa https://www.encodeproject.org/files/ENCFF164BVB/@@download/ENCFF164BVB.bed.gz hg19 released inconsistent platforms, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF034DTN bed narrowPeak peaks ENCSR028UIU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF3-human ENCAB548QXS DNA False 2016-07-08 ENCODE 1, 2 ENCFF160VXC, ENCFF478OFO, ENCFF512OEJ, ENCFF834TUP 7255556 ENCODE Processing Pipeline 4ac31635812722fe06d173a2b4d1ca88 https://www.encodeproject.org/files/ENCFF034DTN/@@download/ENCFF034DTN.bed.gz hg19 released inconsistent platforms, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF961WKS bigBed narrowPeak peaks ENCSR028UIU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF3-human ENCAB548QXS DNA False 2016-07-08 ENCODE 1 ENCFF263MQY 13619149 ENCODE Processing Pipeline 6a452c0c8a9ae09bdced8bc3f57747fb https://www.encodeproject.org/files/ENCFF961WKS/@@download/ENCFF961WKS.bigBed hg19 released inconsistent platforms, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF718BGA bigBed narrowPeak peaks ENCSR028UIU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF3-human ENCAB548QXS DNA False 2016-07-08 ENCODE 2 ENCFF164BVB 13146896 ENCODE Processing Pipeline 059ed6b851386c9ef2af9f0c863a5bd3 https://www.encodeproject.org/files/ENCFF718BGA/@@download/ENCFF718BGA.bigBed hg19 released inconsistent platforms, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF815VNX bigBed narrowPeak peaks ENCSR028UIU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF3-human ENCAB548QXS DNA False 2016-07-08 ENCODE 1, 2 ENCFF034DTN 13675646 ENCODE Processing Pipeline 993be9f7c36a31561118a29d832e2cbf https://www.encodeproject.org/files/ENCFF815VNX/@@download/ENCFF815VNX.bigBed hg19 released inconsistent platforms, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF737ZGG bed narrowPeak conservative idr thresholded peaks ENCSR028UIU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF3-human ENCAB548QXS DNA False 2016-07-08 ENCODE 1, 2 ENCFF001TDO, ENCFF034DTN, ENCFF164BVB, ENCFF263MQY 783119 ENCODE Processing Pipeline e453b6a71d920c99675d594cd395e5b5 https://www.encodeproject.org/files/ENCFF737ZGG/@@download/ENCFF737ZGG.bed.gz hg19 released inconsistent platforms, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF803VVQ bed narrowPeak peaks ENCSR028UIU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF3-human ENCAB548QXS DNA False 2016-07-08 ENCODE 1 ENCFF373DUA, ENCFF790TAN 7023601 ENCODE Processing Pipeline c4a33a375f2e1b6005b200d364160a2a https://www.encodeproject.org/files/ENCFF803VVQ/@@download/ENCFF803VVQ.bed.gz GRCh38 released inconsistent platforms, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF836ZXF bigBed narrowPeak conservative idr thresholded peaks ENCSR028UIU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF3-human ENCAB548QXS DNA False 2016-07-08 ENCODE 1, 2 ENCFF737ZGG 1549009 ENCODE Processing Pipeline deeb430d38c1abb354da46cf0531d413 https://www.encodeproject.org/files/ENCFF836ZXF/@@download/ENCFF836ZXF.bigBed hg19 released inconsistent platforms, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF958KNK bed narrowPeak optimal idr thresholded peaks ENCSR028UIU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF3-human ENCAB548QXS DNA False 2016-07-08 ENCODE 1, 2 ENCFF001TDO, ENCFF034DTN, ENCFF164BVB, ENCFF263MQY 1074003 ENCODE Processing Pipeline 9766f5508a9d7c4285265a20084a2850 https://www.encodeproject.org/files/ENCFF958KNK/@@download/ENCFF958KNK.bed.gz hg19 released inconsistent platforms, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF950AHH bigBed narrowPeak optimal idr thresholded peaks ENCSR028UIU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF3-human ENCAB548QXS DNA False 2016-07-08 ENCODE 1, 2 ENCFF958KNK 1997182 ENCODE Processing Pipeline 0b071fb73fd646425c96876d9e7111fc https://www.encodeproject.org/files/ENCFF950AHH/@@download/ENCFF950AHH.bigBed hg19 released inconsistent platforms, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF983STO bigBed narrowPeak optimal idr thresholded peaks ENCSR028UIU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF3-human ENCAB548QXS DNA False 2016-07-08 ENCODE 1, 2 ENCFF937OKC 2066419 ENCODE Processing Pipeline 16d749a7a28b57fb5f852ed467d963eb https://www.encodeproject.org/files/ENCFF983STO/@@download/ENCFF983STO.bigBed GRCh38 released inconsistent platforms, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF225ALT bed narrowPeak peaks ENCSR028UIU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF3-human ENCAB548QXS DNA False 2016-07-08 ENCODE 1, 2 ENCFF373DUA, ENCFF382QTB, ENCFF712WXB, ENCFF790TAN 7367777 ENCODE Processing Pipeline 4aaf97f8efb926db91a63f5abb646013 https://www.encodeproject.org/files/ENCFF225ALT/@@download/ENCFF225ALT.bed.gz GRCh38 released inconsistent platforms, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF217UTL bigBed narrowPeak peaks ENCSR028UIU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF3-human ENCAB548QXS DNA False 2016-07-08 ENCODE 1 ENCFF803VVQ 13635584 ENCODE Processing Pipeline 7c57f0bb17605f59984dd0299e4a9153 https://www.encodeproject.org/files/ENCFF217UTL/@@download/ENCFF217UTL.bigBed GRCh38 released inconsistent platforms, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF937OKC bed narrowPeak optimal idr thresholded peaks ENCSR028UIU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF3-human ENCAB548QXS DNA False 2016-07-08 ENCODE 1, 2 ENCFF151HWD, ENCFF225ALT, ENCFF419RSJ, ENCFF803VVQ 1113570 ENCODE Processing Pipeline 514035b47c592feb695ca9c9c919d4c6 https://www.encodeproject.org/files/ENCFF937OKC/@@download/ENCFF937OKC.bed.gz GRCh38 released inconsistent platforms, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF151HWD bed narrowPeak peaks ENCSR028UIU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF3-human ENCAB548QXS DNA False 2016-07-08 ENCODE 2 ENCFF382QTB, ENCFF712WXB 7027515 ENCODE Processing Pipeline 7f0d84569ebc72919e0aef1ed4f72e7b https://www.encodeproject.org/files/ENCFF151HWD/@@download/ENCFF151HWD.bed.gz GRCh38 released inconsistent platforms, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF933VGF bigBed narrowPeak peaks ENCSR028UIU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF3-human ENCAB548QXS DNA False 2016-07-08 ENCODE 2 ENCFF151HWD 13159925 ENCODE Processing Pipeline 76cccd0c86e9bf757105e6bdcc78d0c3 https://www.encodeproject.org/files/ENCFF933VGF/@@download/ENCFF933VGF.bigBed GRCh38 released inconsistent platforms, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF902FQQ bigBed narrowPeak conservative idr thresholded peaks ENCSR028UIU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF3-human ENCAB548QXS DNA False 2016-07-08 ENCODE 1, 2 ENCFF011BHF 1607086 ENCODE Processing Pipeline 8c80ad4311bf67514e53eeefffaa655a https://www.encodeproject.org/files/ENCFF902FQQ/@@download/ENCFF902FQQ.bigBed GRCh38 released inconsistent platforms, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF704UGS bigBed narrowPeak peaks ENCSR028UIU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF3-human ENCAB548QXS DNA False 2016-07-08 ENCODE 1, 2 ENCFF225ALT 13821431 ENCODE Processing Pipeline 28a0102502f2bd5a859b1e91f6819f80 https://www.encodeproject.org/files/ENCFF704UGS/@@download/ENCFF704UGS.bigBed GRCh38 released inconsistent platforms, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF011BHF bed narrowPeak conservative idr thresholded peaks ENCSR028UIU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF3-human ENCAB548QXS DNA False 2016-07-08 ENCODE 1, 2 ENCFF151HWD, ENCFF225ALT, ENCFF419RSJ, ENCFF803VVQ 816354 ENCODE Processing Pipeline aa3885a519239e88509b94ea5f466397 https://www.encodeproject.org/files/ENCFF011BHF/@@download/ENCFF011BHF.bed.gz GRCh38 released inconsistent platforms, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO ENCFF360RYW bam unfiltered alignments ENCSR126FZN ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-PTRF-human ENCAB728YTO DNA False 2016-01-14 ENCODE 2 100 ENCFF141RCB, ENCFF781WSM, ENCFF807MUK 5599778941 ENCODE Processing Pipeline 94170d770ddf0fa54dbee9794531e9e7 https://www.encodeproject.org/files/ENCFF360RYW/@@download/ENCFF360RYW.bam hg19 released missing genetic modification characterization, mild to moderate bottlenecking missing control alignments ENCFF555ROG bam unfiltered alignments ENCSR126FZN ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-PTRF-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1 100 ENCFF474LQU, ENCFF532XZW, ENCFF807MUK 5398452977 ENCODE Processing Pipeline 801938e459e781f6966ba250bbc2301c https://www.encodeproject.org/files/ENCFF555ROG/@@download/ENCFF555ROG.bam hg19 released missing genetic modification characterization, mild to moderate bottlenecking missing control alignments ENCFF781WSM fastq reads ENCSR126FZN ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-PTRF-human ENCAB728YTO DNA False 2016-01-14 ENCODE 2 1 100 paired-ended 2 ENCFF141RCB 2666642817 Michael Snyder, Stanford cdb721e4d03b1dc1d4ae11f25eee2f42 SRA:SRR5111258 https://www.encodeproject.org/files/ENCFF781WSM/@@download/ENCFF781WSM.fastq.gz Illumina HiSeq 2000 /files/ENCFF928HTI/ released missing genetic modification characterization, mild to moderate bottlenecking missing control alignments ENCFF474LQU fastq reads ENCSR126FZN ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-PTRF-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1 1 100 paired-ended 1 ENCFF532XZW 2407303225 Michael Snyder, Stanford f27974a57a7e72a55e3e5e0c14b6e45c SRA:SRR5111257 https://www.encodeproject.org/files/ENCFF474LQU/@@download/ENCFF474LQU.fastq.gz Illumina HiSeq 2000 /files/ENCFF931LWJ/ released missing genetic modification characterization, mild to moderate bottlenecking missing control alignments ENCFF141RCB fastq reads ENCSR126FZN ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-PTRF-human ENCAB728YTO DNA False 2016-01-14 ENCODE 2 1 100 paired-ended 1 ENCFF781WSM 2493677360 Michael Snyder, Stanford 7103de46bbf7012e4d25110ae3d020e1 SRA:SRR5111258 https://www.encodeproject.org/files/ENCFF141RCB/@@download/ENCFF141RCB.fastq.gz Illumina HiSeq 2000 /files/ENCFF931LWJ/ released missing genetic modification characterization, mild to moderate bottlenecking missing control alignments ENCFF532XZW fastq reads ENCSR126FZN ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-PTRF-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1 1 100 paired-ended 2 ENCFF474LQU 2505950617 Michael Snyder, Stanford dc0f900b534bf449927baeb95cc84ceb SRA:SRR5111257 https://www.encodeproject.org/files/ENCFF532XZW/@@download/ENCFF532XZW.fastq.gz Illumina HiSeq 2000 /files/ENCFF928HTI/ released missing genetic modification characterization, mild to moderate bottlenecking missing control alignments ENCFF024MPE bam alignments ENCSR126FZN ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-PTRF-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1 100 ENCFF474LQU, ENCFF532XZW, ENCFF807MUK 4204614264 ENCODE Processing Pipeline 5752bc3337888c69d4b358adf2d18067 https://www.encodeproject.org/files/ENCFF024MPE/@@download/ENCFF024MPE.bam hg19 released missing genetic modification characterization, mild to moderate bottlenecking missing control alignments ENCFF866OLR bam alignments ENCSR126FZN ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-PTRF-human ENCAB728YTO DNA False 2016-01-14 ENCODE 2 100 ENCFF141RCB, ENCFF781WSM, ENCFF807MUK 4495717653 ENCODE Processing Pipeline 93d63ad8b3ec69528ee87d465ef2a25c https://www.encodeproject.org/files/ENCFF866OLR/@@download/ENCFF866OLR.bam hg19 released missing genetic modification characterization, mild to moderate bottlenecking missing control alignments ENCFF507CFN bam unfiltered alignments ENCSR126FZN ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-PTRF-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1 100 ENCFF474LQU, ENCFF532XZW, ENCFF643CGH 5405666788 ENCODE Processing Pipeline 67030a30e0a55bf820e5af14b024cbb0 https://www.encodeproject.org/files/ENCFF507CFN/@@download/ENCFF507CFN.bam GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking missing control alignments ENCFF647HAV bam unfiltered alignments ENCSR126FZN ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-PTRF-human ENCAB728YTO DNA False 2016-01-14 ENCODE 2 100 ENCFF141RCB, ENCFF643CGH, ENCFF781WSM 5608212084 ENCODE Processing Pipeline 537139d5926e646c91d2e7cfb6a227ac https://www.encodeproject.org/files/ENCFF647HAV/@@download/ENCFF647HAV.bam GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking missing control alignments ENCFF400SKV bam alignments ENCSR126FZN ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-PTRF-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1 100 ENCFF474LQU, ENCFF532XZW, ENCFF643CGH 4207551439 ENCODE Processing Pipeline 5fee2d667108165a647aa82047dee4a9 https://www.encodeproject.org/files/ENCFF400SKV/@@download/ENCFF400SKV.bam GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking missing control alignments ENCFF498KCA bam alignments ENCSR126FZN ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-PTRF-human ENCAB728YTO DNA False 2016-01-14 ENCODE 2 100 ENCFF141RCB, ENCFF643CGH, ENCFF781WSM 4497998934 ENCODE Processing Pipeline c1e3892de8c9f395b638df6462168bce https://www.encodeproject.org/files/ENCFF498KCA/@@download/ENCFF498KCA.bam GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking missing control alignments ENCFF137LUR bigWig signal p-value ENCSR126FZN ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-PTRF-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1 ENCFF400SKV 1000969783 ENCODE Processing Pipeline 13a38c071bc05d7e1e153739cc6cccd4 https://www.encodeproject.org/files/ENCFF137LUR/@@download/ENCFF137LUR.bigWig GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking missing control alignments ENCFF672DUT bigWig signal p-value ENCSR126FZN ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-PTRF-human ENCAB728YTO DNA False 2016-01-14 ENCODE 2 ENCFF498KCA 1122517699 ENCODE Processing Pipeline ec5a40d6780b8698ea81d0e15b39f968 https://www.encodeproject.org/files/ENCFF672DUT/@@download/ENCFF672DUT.bigWig GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking missing control alignments ENCFF773EUU bigWig signal p-value ENCSR126FZN ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-PTRF-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF400SKV, ENCFF498KCA 1270359537 ENCODE Processing Pipeline 2f991d5b0a4c38e190b46711194ee1a3 https://www.encodeproject.org/files/ENCFF773EUU/@@download/ENCFF773EUU.bigWig GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking missing control alignments ENCFF044YVQ bigWig fold change over control ENCSR126FZN ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-PTRF-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1 ENCFF400SKV 1104364794 ENCODE Processing Pipeline 7086f088c93fe4eb157eda6614fcbb2b https://www.encodeproject.org/files/ENCFF044YVQ/@@download/ENCFF044YVQ.bigWig GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking missing control alignments ENCFF469AOM bigWig fold change over control ENCSR126FZN ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-PTRF-human ENCAB728YTO DNA False 2016-01-14 ENCODE 2 ENCFF498KCA 1087777367 ENCODE Processing Pipeline 6c3581af45e18aa4c61d05cb8594b61c https://www.encodeproject.org/files/ENCFF469AOM/@@download/ENCFF469AOM.bigWig GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking missing control alignments ENCFF069ETX bigWig fold change over control ENCSR126FZN ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-PTRF-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF400SKV, ENCFF498KCA 1647143355 ENCODE Processing Pipeline a46c91167fbbfb8717567948bcfd6d33 https://www.encodeproject.org/files/ENCFF069ETX/@@download/ENCFF069ETX.bigWig GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking missing control alignments ENCFF501PAH bed narrowPeak peaks ENCSR126FZN ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-PTRF-human ENCAB728YTO DNA False 2016-01-14 ENCODE 2 ENCFF498KCA 6086835 ENCODE Processing Pipeline 48d3320887430fa40ae61106359f7d60 https://www.encodeproject.org/files/ENCFF501PAH/@@download/ENCFF501PAH.bed.gz GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking missing control alignments ENCFF464CGY bed narrowPeak peaks ENCSR126FZN ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-PTRF-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF400SKV, ENCFF498KCA 7038578 ENCODE Processing Pipeline e3c3e79c0e54a9e76053c4c58f9dcca5 https://www.encodeproject.org/files/ENCFF464CGY/@@download/ENCFF464CGY.bed.gz GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking missing control alignments ENCFF650BPF bed narrowPeak peaks ENCSR126FZN ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-PTRF-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1 ENCFF400SKV 6157446 ENCODE Processing Pipeline df51471479399d35f908de94fe5a4611 https://www.encodeproject.org/files/ENCFF650BPF/@@download/ENCFF650BPF.bed.gz GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking missing control alignments ENCFF083OJG bigBed narrowPeak peaks ENCSR126FZN ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-PTRF-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1 ENCFF650BPF 11203780 ENCODE Processing Pipeline fd19fd05052dc3db84c4ed225b1591eb https://www.encodeproject.org/files/ENCFF083OJG/@@download/ENCFF083OJG.bigBed GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking missing control alignments ENCFF061IFC bigBed narrowPeak peaks ENCSR126FZN ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-PTRF-human ENCAB728YTO DNA False 2016-01-14 ENCODE 2 ENCFF501PAH 11236827 ENCODE Processing Pipeline 9a42a8c7f47eef26ad5e89379b43a1dd https://www.encodeproject.org/files/ENCFF061IFC/@@download/ENCFF061IFC.bigBed GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking missing control alignments ENCFF941GZX bigBed narrowPeak peaks ENCSR126FZN ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-PTRF-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF464CGY 11126585 ENCODE Processing Pipeline c464674ce8ff60faf6a0d0903b4bba9d https://www.encodeproject.org/files/ENCFF941GZX/@@download/ENCFF941GZX.bigBed GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking missing control alignments ENCFF736AVY bed narrowPeak conservative idr thresholded peaks ENCSR126FZN ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-PTRF-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF419RSJ, ENCFF464CGY, ENCFF501PAH, ENCFF650BPF 74131 ENCODE Processing Pipeline 6cc474df468741aaf7591d366036aff6 https://www.encodeproject.org/files/ENCFF736AVY/@@download/ENCFF736AVY.bed.gz GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking missing control alignments ENCFF622AET bigBed narrowPeak conservative idr thresholded peaks ENCSR126FZN ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-PTRF-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF736AVY 200516 ENCODE Processing Pipeline e1548635bca7d087a209b01c30cb8753 https://www.encodeproject.org/files/ENCFF622AET/@@download/ENCFF622AET.bigBed GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking missing control alignments ENCFF229BQZ bed narrowPeak optimal idr thresholded peaks ENCSR126FZN ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-PTRF-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF419RSJ, ENCFF464CGY, ENCFF501PAH, ENCFF650BPF 97136 ENCODE Processing Pipeline 6ad779af2eef6ffe8b0bc3aae3197028 https://www.encodeproject.org/files/ENCFF229BQZ/@@download/ENCFF229BQZ.bed.gz GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking missing control alignments ENCFF257VBE bigBed narrowPeak optimal idr thresholded peaks ENCSR126FZN ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-PTRF-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF229BQZ 234930 ENCODE Processing Pipeline 82e497fe40440440903c4e1c1710b06c https://www.encodeproject.org/files/ENCFF257VBE/@@download/ENCFF257VBE.bigBed GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking missing control alignments ENCFF554EUB bigWig fold change over control ENCSR126FZN ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-PTRF-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1 ENCFF024MPE, ENCFF304EUO 1089901978 ENCODE Processing Pipeline 3e3aac7e0f87858377997d14da71916b https://www.encodeproject.org/files/ENCFF554EUB/@@download/ENCFF554EUB.bigWig hg19 released missing genetic modification characterization, mild to moderate bottlenecking missing control alignments ENCFF536LRM bigWig signal p-value ENCSR126FZN ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-PTRF-human ENCAB728YTO DNA False 2016-01-14 ENCODE 2 ENCFF304EUO, ENCFF866OLR 1039264164 ENCODE Processing Pipeline 1176f0def0b43ce6a5a202262881f181 https://www.encodeproject.org/files/ENCFF536LRM/@@download/ENCFF536LRM.bigWig hg19 released missing genetic modification characterization, mild to moderate bottlenecking missing control alignments ENCFF355KNJ bed narrowPeak peaks ENCSR126FZN ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-PTRF-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1 ENCFF024MPE, ENCFF304EUO 6157206 ENCODE Processing Pipeline dd2a0ea9d56a21d71096278aa6ef3506 https://www.encodeproject.org/files/ENCFF355KNJ/@@download/ENCFF355KNJ.bed.gz hg19 released missing genetic modification characterization, mild to moderate bottlenecking missing control alignments ENCFF357IPW bed narrowPeak peaks ENCSR126FZN ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-PTRF-human ENCAB728YTO DNA False 2016-01-14 ENCODE 2 ENCFF304EUO, ENCFF866OLR 6081540 ENCODE Processing Pipeline 9ff6ea0815cc9537fdb85397e1843422 https://www.encodeproject.org/files/ENCFF357IPW/@@download/ENCFF357IPW.bed.gz hg19 released missing genetic modification characterization, mild to moderate bottlenecking missing control alignments ENCFF488ZUO bed narrowPeak peaks ENCSR126FZN ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-PTRF-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF024MPE, ENCFF304EUO, ENCFF866OLR 7028784 ENCODE Processing Pipeline 232c2f36af89f4cbd6083828588994ca https://www.encodeproject.org/files/ENCFF488ZUO/@@download/ENCFF488ZUO.bed.gz hg19 released missing genetic modification characterization, mild to moderate bottlenecking missing control alignments ENCFF462TZL bigWig signal p-value ENCSR126FZN ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-PTRF-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1 ENCFF024MPE, ENCFF304EUO 946918104 ENCODE Processing Pipeline aabd321121ac0fc7d403ba652a38965f https://www.encodeproject.org/files/ENCFF462TZL/@@download/ENCFF462TZL.bigWig hg19 released missing genetic modification characterization, mild to moderate bottlenecking missing control alignments ENCFF442MPN bigWig signal p-value ENCSR126FZN ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-PTRF-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF024MPE, ENCFF304EUO, ENCFF866OLR 1267738106 ENCODE Processing Pipeline e743b879de1700e299fbf712284065d4 https://www.encodeproject.org/files/ENCFF442MPN/@@download/ENCFF442MPN.bigWig hg19 released missing genetic modification characterization, mild to moderate bottlenecking missing control alignments ENCFF627XTL bigWig fold change over control ENCSR126FZN ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-PTRF-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF024MPE, ENCFF304EUO, ENCFF866OLR 1644631791 ENCODE Processing Pipeline 3d378a7757e570d4a25a699916e1ae0b https://www.encodeproject.org/files/ENCFF627XTL/@@download/ENCFF627XTL.bigWig hg19 released missing genetic modification characterization, mild to moderate bottlenecking missing control alignments ENCFF475EBC bigBed narrowPeak peaks ENCSR126FZN ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-PTRF-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF488ZUO 11106766 ENCODE Processing Pipeline 96cdc1504a504b90bf611167f0865964 https://www.encodeproject.org/files/ENCFF475EBC/@@download/ENCFF475EBC.bigBed hg19 released missing genetic modification characterization, mild to moderate bottlenecking missing control alignments ENCFF569DRA bigBed narrowPeak conservative idr thresholded peaks ENCSR126FZN ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-PTRF-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF403EOA 197447 ENCODE Processing Pipeline fbaf2804d3cd0a3d42ca59dc861e863a https://www.encodeproject.org/files/ENCFF569DRA/@@download/ENCFF569DRA.bigBed hg19 released missing genetic modification characterization, mild to moderate bottlenecking missing control alignments ENCFF708KMN bigWig fold change over control ENCSR126FZN ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-PTRF-human ENCAB728YTO DNA False 2016-01-14 ENCODE 2 ENCFF304EUO, ENCFF866OLR 1090261247 ENCODE Processing Pipeline 1d40e780f4bb54fb6f66ea27916e2619 https://www.encodeproject.org/files/ENCFF708KMN/@@download/ENCFF708KMN.bigWig hg19 released missing genetic modification characterization, mild to moderate bottlenecking missing control alignments ENCFF595RCV bigBed narrowPeak peaks ENCSR126FZN ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-PTRF-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1 ENCFF355KNJ 11185963 ENCODE Processing Pipeline ba4147970d04ba41013e09e5130070f5 https://www.encodeproject.org/files/ENCFF595RCV/@@download/ENCFF595RCV.bigBed hg19 released missing genetic modification characterization, mild to moderate bottlenecking missing control alignments ENCFF835CTI bigBed narrowPeak peaks ENCSR126FZN ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-PTRF-human ENCAB728YTO DNA False 2016-01-14 ENCODE 2 ENCFF357IPW 11217584 ENCODE Processing Pipeline a625e938cf49d6b8f7487d510dea7b17 https://www.encodeproject.org/files/ENCFF835CTI/@@download/ENCFF835CTI.bigBed hg19 released missing genetic modification characterization, mild to moderate bottlenecking missing control alignments ENCFF403EOA bed narrowPeak conservative idr thresholded peaks ENCSR126FZN ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-PTRF-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF001TDO, ENCFF355KNJ, ENCFF357IPW, ENCFF488ZUO 72715 ENCODE Processing Pipeline 64b1427667f0ece7692715b330338dd7 https://www.encodeproject.org/files/ENCFF403EOA/@@download/ENCFF403EOA.bed.gz hg19 released missing genetic modification characterization, mild to moderate bottlenecking missing control alignments ENCFF007DKB bed narrowPeak optimal idr thresholded peaks ENCSR126FZN ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-PTRF-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF001TDO, ENCFF355KNJ, ENCFF357IPW, ENCFF488ZUO 97313 ENCODE Processing Pipeline e43f9679c5db6d500d389acadd52871e https://www.encodeproject.org/files/ENCFF007DKB/@@download/ENCFF007DKB.bed.gz hg19 released missing genetic modification characterization, mild to moderate bottlenecking missing control alignments ENCFF964LYS bigBed narrowPeak optimal idr thresholded peaks ENCSR126FZN ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-PTRF-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF007DKB 234005 ENCODE Processing Pipeline 008000885684e0c891ceef6b7d25c234 https://www.encodeproject.org/files/ENCFF964LYS/@@download/ENCFF964LYS.bigBed hg19 released missing genetic modification characterization, mild to moderate bottlenecking missing control alignments ENCFF953DFO bam unfiltered alignments ENCSR107GRP ChIP-seq EFO:0002067 K562 cell line Homo sapiens MLLT1-human ENCAB650PBW DNA False 2016-06-14 ENCODE 2 100 ENCFF135KOW, ENCFF789UDV, ENCFF807MUK 6905998093 ENCODE Processing Pipeline 386a82967e1ab240658a72c81c54bb27 https://www.encodeproject.org/files/ENCFF953DFO/@@download/ENCFF953DFO.bam hg19 released ENCFF732HKQ bam unfiltered alignments ENCSR107GRP ChIP-seq EFO:0002067 K562 cell line Homo sapiens MLLT1-human ENCAB650PBW DNA False 2016-06-14 ENCODE 1 100 ENCFF755BUR, ENCFF807MUK, ENCFF994RSC 4970494837 ENCODE Processing Pipeline 5d154c2727a739cc99b06ae8ad49dd83 https://www.encodeproject.org/files/ENCFF732HKQ/@@download/ENCFF732HKQ.bam hg19 released ENCFF994RSC fastq reads ENCSR107GRP ChIP-seq EFO:0002067 K562 cell line Homo sapiens MLLT1-human ENCAB650PBW DNA False 2016-06-14 ENCODE 1 1 100 paired-ended 1 ENCFF755BUR 2290264619 Michael Snyder, Stanford 8b92407fef037e90761403b436d595ff SRA:SRR5111112 https://www.encodeproject.org/files/ENCFF994RSC/@@download/ENCFF994RSC.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFF/ released ENCFF135KOW fastq reads ENCSR107GRP ChIP-seq EFO:0002067 K562 cell line Homo sapiens MLLT1-human ENCAB650PBW DNA False 2016-06-14 ENCODE 2 1 100 paired-ended 1 ENCFF789UDV 3204019008 Michael Snyder, Stanford e1c56285e82a750fe68d3934f374127f SRA:SRR5111113 https://www.encodeproject.org/files/ENCFF135KOW/@@download/ENCFF135KOW.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFD/ released ENCFF789UDV fastq reads ENCSR107GRP ChIP-seq EFO:0002067 K562 cell line Homo sapiens MLLT1-human ENCAB650PBW DNA False 2016-06-14 ENCODE 2 1 100 paired-ended 2 ENCFF135KOW 3309415447 Michael Snyder, Stanford 25fdbda495ac6ce7f81164978eb34478 SRA:SRR5111113 https://www.encodeproject.org/files/ENCFF789UDV/@@download/ENCFF789UDV.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFA/ released ENCFF755BUR fastq reads ENCSR107GRP ChIP-seq EFO:0002067 K562 cell line Homo sapiens MLLT1-human ENCAB650PBW DNA False 2016-06-14 ENCODE 1 1 100 paired-ended 2 ENCFF994RSC 2280300971 Michael Snyder, Stanford 49080364d184a8d1b76a5846f90268b8 SRA:SRR5111112 https://www.encodeproject.org/files/ENCFF755BUR/@@download/ENCFF755BUR.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFH/ released ENCFF463KKL bam alignments ENCSR107GRP ChIP-seq EFO:0002067 K562 cell line Homo sapiens MLLT1-human ENCAB650PBW DNA False 2016-06-14 ENCODE 1 100 ENCFF755BUR, ENCFF807MUK, ENCFF994RSC 4179492222 ENCODE Processing Pipeline a284c16e0a5dbfbabffcb3fd98d1faae https://www.encodeproject.org/files/ENCFF463KKL/@@download/ENCFF463KKL.bam hg19 released ENCFF069MNA bam alignments ENCSR107GRP ChIP-seq EFO:0002067 K562 cell line Homo sapiens MLLT1-human ENCAB650PBW DNA False 2016-06-14 ENCODE 2 100 ENCFF135KOW, ENCFF789UDV, ENCFF807MUK 5836136796 ENCODE Processing Pipeline a237c13c073e0a8b797b7bb3e230f558 https://www.encodeproject.org/files/ENCFF069MNA/@@download/ENCFF069MNA.bam hg19 released ENCFF265KGI bigWig signal p-value ENCSR107GRP ChIP-seq EFO:0002067 K562 cell line Homo sapiens MLLT1-human ENCAB650PBW DNA False 2016-06-14 ENCODE 1 ENCFF463KKL, ENCFF581ZJL 1149451474 ENCODE Processing Pipeline 9df1beba656cde3b27ed83528e73e70d https://www.encodeproject.org/files/ENCFF265KGI/@@download/ENCFF265KGI.bigWig hg19 released ENCFF261XKQ bigWig signal p-value ENCSR107GRP ChIP-seq EFO:0002067 K562 cell line Homo sapiens MLLT1-human ENCAB650PBW DNA False 2016-06-14 ENCODE 1, 2 ENCFF051LWI, ENCFF069MNA, ENCFF463KKL, ENCFF581ZJL 1817137750 ENCODE Processing Pipeline 83d4ad038105696f9176dc103d3a29ff https://www.encodeproject.org/files/ENCFF261XKQ/@@download/ENCFF261XKQ.bigWig hg19 released ENCFF006TVX bigWig fold change over control ENCSR107GRP ChIP-seq EFO:0002067 K562 cell line Homo sapiens MLLT1-human ENCAB650PBW DNA False 2016-06-14 ENCODE 1 ENCFF463KKL, ENCFF581ZJL 1126095141 ENCODE Processing Pipeline 70e853f102c3f791bc9a945a44c53753 https://www.encodeproject.org/files/ENCFF006TVX/@@download/ENCFF006TVX.bigWig hg19 released ENCFF024YIP bigWig fold change over control ENCSR107GRP ChIP-seq EFO:0002067 K562 cell line Homo sapiens MLLT1-human ENCAB650PBW DNA False 2016-06-14 ENCODE 1, 2 ENCFF051LWI, ENCFF069MNA, ENCFF463KKL, ENCFF581ZJL 2266759809 ENCODE Processing Pipeline 5254d0554a109947eacec3f5e4ba630c https://www.encodeproject.org/files/ENCFF024YIP/@@download/ENCFF024YIP.bigWig hg19 released ENCFF103HMX bam unfiltered alignments ENCSR107GRP ChIP-seq EFO:0002067 K562 cell line Homo sapiens MLLT1-human ENCAB650PBW DNA False 2016-06-14 ENCODE 1 100 ENCFF643CGH, ENCFF755BUR, ENCFF994RSC 4975071367 ENCODE Processing Pipeline 32479ee51bfcc9cfb6fd3cccd6100f68 https://www.encodeproject.org/files/ENCFF103HMX/@@download/ENCFF103HMX.bam GRCh38 released ENCFF819AWT bam unfiltered alignments ENCSR107GRP ChIP-seq EFO:0002067 K562 cell line Homo sapiens MLLT1-human ENCAB650PBW DNA False 2016-06-14 ENCODE 2 100 ENCFF135KOW, ENCFF643CGH, ENCFF789UDV 6912401595 ENCODE Processing Pipeline 36d705137df5c4374e8618331d482a49 https://www.encodeproject.org/files/ENCFF819AWT/@@download/ENCFF819AWT.bam GRCh38 released ENCFF887LAD bam alignments ENCSR107GRP ChIP-seq EFO:0002067 K562 cell line Homo sapiens MLLT1-human ENCAB650PBW DNA False 2016-06-14 ENCODE 1 100 ENCFF643CGH, ENCFF755BUR, ENCFF994RSC 4181847246 ENCODE Processing Pipeline 3e880059026af4e9b45523dcf0ced39e https://www.encodeproject.org/files/ENCFF887LAD/@@download/ENCFF887LAD.bam GRCh38 released ENCFF777ZPZ bam alignments ENCSR107GRP ChIP-seq EFO:0002067 K562 cell line Homo sapiens MLLT1-human ENCAB650PBW DNA False 2016-06-14 ENCODE 2 100 ENCFF135KOW, ENCFF643CGH, ENCFF789UDV 5841572111 ENCODE Processing Pipeline b584ff9e5d6b85f057e0a51d75ff2542 https://www.encodeproject.org/files/ENCFF777ZPZ/@@download/ENCFF777ZPZ.bam GRCh38 released ENCFF452WPS bigWig signal p-value ENCSR107GRP ChIP-seq EFO:0002067 K562 cell line Homo sapiens MLLT1-human ENCAB650PBW DNA False 2016-06-14 ENCODE 1 ENCFF887LAD, ENCFF910IKB 1231960232 ENCODE Processing Pipeline 712c692c8f73e63f26d6730525b30921 https://www.encodeproject.org/files/ENCFF452WPS/@@download/ENCFF452WPS.bigWig GRCh38 released ENCFF108YGO bigWig signal p-value ENCSR107GRP ChIP-seq EFO:0002067 K562 cell line Homo sapiens MLLT1-human ENCAB650PBW DNA False 2016-06-14 ENCODE 2 ENCFF227IZS, ENCFF777ZPZ 1097199274 ENCODE Processing Pipeline a029334211fbcd1978e30ccc4b9fa7c7 https://www.encodeproject.org/files/ENCFF108YGO/@@download/ENCFF108YGO.bigWig GRCh38 released ENCFF743NEN bigWig signal p-value ENCSR107GRP ChIP-seq EFO:0002067 K562 cell line Homo sapiens MLLT1-human ENCAB650PBW DNA False 2016-06-14 ENCODE 1, 2 ENCFF227IZS, ENCFF777ZPZ, ENCFF887LAD, ENCFF910IKB 2109579818 ENCODE Processing Pipeline eaf10d4a377179b48d8d70c0bf2195fb https://www.encodeproject.org/files/ENCFF743NEN/@@download/ENCFF743NEN.bigWig GRCh38 released ENCFF113JAR bigWig fold change over control ENCSR107GRP ChIP-seq EFO:0002067 K562 cell line Homo sapiens MLLT1-human ENCAB650PBW DNA False 2016-06-14 ENCODE 1 ENCFF887LAD, ENCFF910IKB 1121765085 ENCODE Processing Pipeline 80bdfa4f98a38d6a1998f545fb9435bb https://www.encodeproject.org/files/ENCFF113JAR/@@download/ENCFF113JAR.bigWig GRCh38 released ENCFF804SAH bigWig fold change over control ENCSR107GRP ChIP-seq EFO:0002067 K562 cell line Homo sapiens MLLT1-human ENCAB650PBW DNA False 2016-06-14 ENCODE 2 ENCFF227IZS, ENCFF777ZPZ 1381905865 ENCODE Processing Pipeline 792d4e6bef3cc107f585a71c803e8a9c https://www.encodeproject.org/files/ENCFF804SAH/@@download/ENCFF804SAH.bigWig GRCh38 released ENCFF720MIG bigWig fold change over control ENCSR107GRP ChIP-seq EFO:0002067 K562 cell line Homo sapiens MLLT1-human ENCAB650PBW DNA False 2016-06-14 ENCODE 1, 2 ENCFF227IZS, ENCFF777ZPZ, ENCFF887LAD, ENCFF910IKB 2268996558 ENCODE Processing Pipeline bad5697274dc2fc4ab61a583d04940f4 https://www.encodeproject.org/files/ENCFF720MIG/@@download/ENCFF720MIG.bigWig GRCh38 released ENCFF767VQM bed narrowPeak peaks ENCSR107GRP ChIP-seq EFO:0002067 K562 cell line Homo sapiens MLLT1-human ENCAB650PBW DNA False 2016-06-14 ENCODE 1 ENCFF887LAD, ENCFF910IKB 6707535 ENCODE Processing Pipeline f275d65537634a8adf1ddae792b22340 https://www.encodeproject.org/files/ENCFF767VQM/@@download/ENCFF767VQM.bed.gz GRCh38 released ENCFF959DNJ bed narrowPeak peaks ENCSR107GRP ChIP-seq EFO:0002067 K562 cell line Homo sapiens MLLT1-human ENCAB650PBW DNA False 2016-06-14 ENCODE 2 ENCFF227IZS, ENCFF777ZPZ 7042364 ENCODE Processing Pipeline 55ad10afb1c93666b48ca7f83f5eac4d https://www.encodeproject.org/files/ENCFF959DNJ/@@download/ENCFF959DNJ.bed.gz GRCh38 released ENCFF442TDR bed narrowPeak peaks ENCSR107GRP ChIP-seq EFO:0002067 K562 cell line Homo sapiens MLLT1-human ENCAB650PBW DNA False 2016-06-14 ENCODE 1, 2 ENCFF227IZS, ENCFF777ZPZ, ENCFF887LAD, ENCFF910IKB 7287634 ENCODE Processing Pipeline 279736b0d88de11871852ef1e18ec977 https://www.encodeproject.org/files/ENCFF442TDR/@@download/ENCFF442TDR.bed.gz GRCh38 released ENCFF554JLD bigBed narrowPeak peaks ENCSR107GRP ChIP-seq EFO:0002067 K562 cell line Homo sapiens MLLT1-human ENCAB650PBW DNA False 2016-06-14 ENCODE 1 ENCFF767VQM 13157762 ENCODE Processing Pipeline 231574885fab65de069fdcf39799d7ac https://www.encodeproject.org/files/ENCFF554JLD/@@download/ENCFF554JLD.bigBed GRCh38 released ENCFF525YCB bigBed narrowPeak peaks ENCSR107GRP ChIP-seq EFO:0002067 K562 cell line Homo sapiens MLLT1-human ENCAB650PBW DNA False 2016-06-14 ENCODE 2 ENCFF959DNJ 13051305 ENCODE Processing Pipeline 3676db0cc39806b9925c764e68fb0d42 https://www.encodeproject.org/files/ENCFF525YCB/@@download/ENCFF525YCB.bigBed GRCh38 released ENCFF316KQT bigBed narrowPeak peaks ENCSR107GRP ChIP-seq EFO:0002067 K562 cell line Homo sapiens MLLT1-human ENCAB650PBW DNA False 2016-06-14 ENCODE 1, 2 ENCFF442TDR 12974232 ENCODE Processing Pipeline fc185c68c7492eb61a80235962f9f091 https://www.encodeproject.org/files/ENCFF316KQT/@@download/ENCFF316KQT.bigBed GRCh38 released ENCFF037UMP bed narrowPeak conservative idr thresholded peaks ENCSR107GRP ChIP-seq EFO:0002067 K562 cell line Homo sapiens MLLT1-human ENCAB650PBW DNA False 2016-06-14 ENCODE 1, 2 ENCFF419RSJ, ENCFF442TDR, ENCFF767VQM, ENCFF959DNJ 378663 ENCODE Processing Pipeline c26fa1023ac535b700fd89dca658cdbd https://www.encodeproject.org/files/ENCFF037UMP/@@download/ENCFF037UMP.bed.gz GRCh38 released ENCFF514UVM bigBed narrowPeak conservative idr thresholded peaks ENCSR107GRP ChIP-seq EFO:0002067 K562 cell line Homo sapiens MLLT1-human ENCAB650PBW DNA False 2016-06-14 ENCODE 1, 2 ENCFF037UMP 904929 ENCODE Processing Pipeline 55d183c8a757821f21a5d78d872d118a https://www.encodeproject.org/files/ENCFF514UVM/@@download/ENCFF514UVM.bigBed GRCh38 released ENCFF010AIG bed narrowPeak optimal idr thresholded peaks ENCSR107GRP ChIP-seq EFO:0002067 K562 cell line Homo sapiens MLLT1-human ENCAB650PBW DNA False 2016-06-14 ENCODE 1, 2 ENCFF419RSJ, ENCFF442TDR, ENCFF767VQM, ENCFF959DNJ 476775 ENCODE Processing Pipeline 1066a28ac5d170f198afbf05a1d694b8 https://www.encodeproject.org/files/ENCFF010AIG/@@download/ENCFF010AIG.bed.gz GRCh38 released ENCFF979ZPM bigBed narrowPeak optimal idr thresholded peaks ENCSR107GRP ChIP-seq EFO:0002067 K562 cell line Homo sapiens MLLT1-human ENCAB650PBW DNA False 2016-06-14 ENCODE 1, 2 ENCFF010AIG 1086369 ENCODE Processing Pipeline 60d114936f8e24dbfb64f4fa727ddff2 https://www.encodeproject.org/files/ENCFF979ZPM/@@download/ENCFF979ZPM.bigBed GRCh38 released ENCFF768MUF bed narrowPeak peaks ENCSR107GRP ChIP-seq EFO:0002067 K562 cell line Homo sapiens MLLT1-human ENCAB650PBW DNA False 2016-06-14 ENCODE 2 ENCFF051LWI, ENCFF069MNA 7062306 ENCODE Processing Pipeline 134d35f18b36ac678477cb75e19a27a2 https://www.encodeproject.org/files/ENCFF768MUF/@@download/ENCFF768MUF.bed.gz hg19 released ENCFF049XZY bigWig signal p-value ENCSR107GRP ChIP-seq EFO:0002067 K562 cell line Homo sapiens MLLT1-human ENCAB650PBW DNA False 2016-06-14 ENCODE 2 ENCFF051LWI, ENCFF069MNA 1353025363 ENCODE Processing Pipeline 74b1295f56fe0db369a59540488f7f6a https://www.encodeproject.org/files/ENCFF049XZY/@@download/ENCFF049XZY.bigWig hg19 released ENCFF388SCV bigWig fold change over control ENCSR107GRP ChIP-seq EFO:0002067 K562 cell line Homo sapiens MLLT1-human ENCAB650PBW DNA False 2016-06-14 ENCODE 2 ENCFF051LWI, ENCFF069MNA 1395035813 ENCODE Processing Pipeline f8ebdaa94c530e942e4a86c50ea36c3b https://www.encodeproject.org/files/ENCFF388SCV/@@download/ENCFF388SCV.bigWig hg19 released ENCFF743CIS bed narrowPeak peaks ENCSR107GRP ChIP-seq EFO:0002067 K562 cell line Homo sapiens MLLT1-human ENCAB650PBW DNA False 2016-06-14 ENCODE 1 ENCFF463KKL, ENCFF581ZJL 6703465 ENCODE Processing Pipeline f4e5c9c63dc8c1100f49bb50b9cad7b2 https://www.encodeproject.org/files/ENCFF743CIS/@@download/ENCFF743CIS.bed.gz hg19 released ENCFF884QJV bigBed narrowPeak peaks ENCSR107GRP ChIP-seq EFO:0002067 K562 cell line Homo sapiens MLLT1-human ENCAB650PBW DNA False 2016-06-14 ENCODE 1 ENCFF743CIS 13144485 ENCODE Processing Pipeline 05aa64fc21791282900629ae1d19560f https://www.encodeproject.org/files/ENCFF884QJV/@@download/ENCFF884QJV.bigBed hg19 released ENCFF712UDU bigBed narrowPeak peaks ENCSR107GRP ChIP-seq EFO:0002067 K562 cell line Homo sapiens MLLT1-human ENCAB650PBW DNA False 2016-06-14 ENCODE 1, 2 ENCFF948VWR 12966381 ENCODE Processing Pipeline 2885820922a25750497ba604f44f209d https://www.encodeproject.org/files/ENCFF712UDU/@@download/ENCFF712UDU.bigBed hg19 released ENCFF385NDP bigBed narrowPeak conservative idr thresholded peaks ENCSR107GRP ChIP-seq EFO:0002067 K562 cell line Homo sapiens MLLT1-human ENCAB650PBW DNA False 2016-06-14 ENCODE 1, 2 ENCFF460XQR 897039 ENCODE Processing Pipeline 8b953426fd03e471eead1c88fc8cf2d0 https://www.encodeproject.org/files/ENCFF385NDP/@@download/ENCFF385NDP.bigBed hg19 released ENCFF039EJO bigBed narrowPeak peaks ENCSR107GRP ChIP-seq EFO:0002067 K562 cell line Homo sapiens MLLT1-human ENCAB650PBW DNA False 2016-06-14 ENCODE 2 ENCFF768MUF 13038121 ENCODE Processing Pipeline a5f311d677cd12b7e76f340e2cc65e22 https://www.encodeproject.org/files/ENCFF039EJO/@@download/ENCFF039EJO.bigBed hg19 released ENCFF948VWR bed narrowPeak peaks ENCSR107GRP ChIP-seq EFO:0002067 K562 cell line Homo sapiens MLLT1-human ENCAB650PBW DNA False 2016-06-14 ENCODE 1, 2 ENCFF051LWI, ENCFF069MNA, ENCFF463KKL, ENCFF581ZJL 7288631 ENCODE Processing Pipeline fd4e7234862d196afe25c7a47a39f3bc https://www.encodeproject.org/files/ENCFF948VWR/@@download/ENCFF948VWR.bed.gz hg19 released ENCFF460XQR bed narrowPeak conservative idr thresholded peaks ENCSR107GRP ChIP-seq EFO:0002067 K562 cell line Homo sapiens MLLT1-human ENCAB650PBW DNA False 2016-06-14 ENCODE 1, 2 ENCFF001TDO, ENCFF743CIS, ENCFF768MUF, ENCFF948VWR 376774 ENCODE Processing Pipeline 2af86103d1a85a8795d53e5b6bd3a118 https://www.encodeproject.org/files/ENCFF460XQR/@@download/ENCFF460XQR.bed.gz hg19 released ENCFF440JJW bed narrowPeak optimal idr thresholded peaks ENCSR107GRP ChIP-seq EFO:0002067 K562 cell line Homo sapiens MLLT1-human ENCAB650PBW DNA False 2016-06-14 ENCODE 1, 2 ENCFF001TDO, ENCFF743CIS, ENCFF768MUF, ENCFF948VWR 474010 ENCODE Processing Pipeline 8e35e0276097b2e8621be227dd056368 https://www.encodeproject.org/files/ENCFF440JJW/@@download/ENCFF440JJW.bed.gz hg19 released ENCFF627JPV bigBed narrowPeak optimal idr thresholded peaks ENCSR107GRP ChIP-seq EFO:0002067 K562 cell line Homo sapiens MLLT1-human ENCAB650PBW DNA False 2016-06-14 ENCODE 1, 2 ENCFF440JJW 1076400 ENCODE Processing Pipeline ee077bbb99247926a3da239b6d0348e8 https://www.encodeproject.org/files/ENCFF627JPV/@@download/ENCFF627JPV.bigBed hg19 released ENCFF784QZI bam unfiltered alignments ENCSR219BXP ChIP-seq EFO:0002067 K562 cell line Homo sapiens DPF2-human ENCAB384ZPY DNA False 2017-11-14 ENCODE 1 100 ENCFF469EAQ, ENCFF807MUK, ENCFF820AHB 4317142224 ENCODE Processing Pipeline d8e34c5fd022cd571479ffa393435e94 https://www.encodeproject.org/files/ENCFF784QZI/@@download/ENCFF784QZI.bam hg19 released borderline replicate concordance experiment not submitted to GEO ENCFF820AHB fastq reads ENCSR219BXP ChIP-seq EFO:0002067 K562 cell line Homo sapiens DPF2-human ENCAB384ZPY DNA False 2017-11-14 ENCODE 1 1 100 paired-ended 1 ENCFF469EAQ 2027211268 Michael Snyder, Stanford ab4b97c043d0cc61141755c049d1d515 https://www.encodeproject.org/files/ENCFF820AHB/@@download/ENCFF820AHB.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFF/ released borderline replicate concordance experiment not submitted to GEO ENCFF469EAQ fastq reads ENCSR219BXP ChIP-seq EFO:0002067 K562 cell line Homo sapiens DPF2-human ENCAB384ZPY DNA False 2017-11-14 ENCODE 1 1 100 paired-ended 2 ENCFF820AHB 1954017440 Michael Snyder, Stanford 658b5f43475b8bbfa9a49ab179e2d4c6 https://www.encodeproject.org/files/ENCFF469EAQ/@@download/ENCFF469EAQ.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFH/ released borderline replicate concordance experiment not submitted to GEO ENCFF814UHO bam alignments ENCSR219BXP ChIP-seq EFO:0002067 K562 cell line Homo sapiens DPF2-human ENCAB384ZPY DNA False 2017-11-14 ENCODE 1 100 ENCFF469EAQ, ENCFF807MUK, ENCFF820AHB 3523253443 ENCODE Processing Pipeline 39614cc96bcc4067efa94085412bba25 https://www.encodeproject.org/files/ENCFF814UHO/@@download/ENCFF814UHO.bam hg19 released borderline replicate concordance experiment not submitted to GEO ENCFF952UEN fastq reads ENCSR219BXP ChIP-seq EFO:0002067 K562 cell line Homo sapiens DPF2-human ENCAB384ZPY DNA False 2017-11-14 ENCODE 3 1 101 paired-ended 1 ENCFF245SAZ 2413880784 Michael Snyder, Stanford 763d5b4efbd1c0a8ccf29cf977e5dfa2 https://www.encodeproject.org/files/ENCFF952UEN/@@download/ENCFF952UEN.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFD/ released borderline replicate concordance experiment not submitted to GEO ENCFF245SAZ fastq reads ENCSR219BXP ChIP-seq EFO:0002067 K562 cell line Homo sapiens DPF2-human ENCAB384ZPY DNA False 2017-11-14 ENCODE 3 1 101 paired-ended 2 ENCFF952UEN 2453199620 Michael Snyder, Stanford 58240827d963d3c2d7c00a5ab5c8f4a5 https://www.encodeproject.org/files/ENCFF245SAZ/@@download/ENCFF245SAZ.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFA/ released borderline replicate concordance experiment not submitted to GEO ENCFF783UKL bam unfiltered alignments ENCSR219BXP ChIP-seq EFO:0002067 K562 cell line Homo sapiens DPF2-human ENCAB384ZPY DNA False 2017-11-14 ENCODE 1 100 ENCFF469EAQ, ENCFF643CGH, ENCFF820AHB 4319422359 ENCODE Processing Pipeline b41c1670553474abb9226013281ebbac https://www.encodeproject.org/files/ENCFF783UKL/@@download/ENCFF783UKL.bam GRCh38 released borderline replicate concordance experiment not submitted to GEO ENCFF438CHI bam alignments ENCSR219BXP ChIP-seq EFO:0002067 K562 cell line Homo sapiens DPF2-human ENCAB384ZPY DNA False 2017-11-14 ENCODE 1 100 ENCFF469EAQ, ENCFF643CGH, ENCFF820AHB 3525059172 ENCODE Processing Pipeline 70a4c166d9b4c4325a1baa91644dcd85 https://www.encodeproject.org/files/ENCFF438CHI/@@download/ENCFF438CHI.bam GRCh38 released borderline replicate concordance experiment not submitted to GEO ENCFF344FYF bam unfiltered alignments ENCSR219BXP ChIP-seq EFO:0002067 K562 cell line Homo sapiens DPF2-human ENCAB384ZPY DNA False 2017-11-14 ENCODE 3 101 ENCFF245SAZ, ENCFF807MUK, ENCFF952UEN 4792990068 ENCODE Processing Pipeline 96f059fd8dd124bbd031f8cd950c03d6 https://www.encodeproject.org/files/ENCFF344FYF/@@download/ENCFF344FYF.bam hg19 released borderline replicate concordance experiment not submitted to GEO ENCFF949SZU bam alignments ENCSR219BXP ChIP-seq EFO:0002067 K562 cell line Homo sapiens DPF2-human ENCAB384ZPY DNA False 2017-11-14 ENCODE 3 101 ENCFF245SAZ, ENCFF807MUK, ENCFF952UEN 4200051124 ENCODE Processing Pipeline d0066360e1826dcb1f08e7b859832f0a https://www.encodeproject.org/files/ENCFF949SZU/@@download/ENCFF949SZU.bam hg19 released borderline replicate concordance experiment not submitted to GEO ENCFF765XMC bam unfiltered alignments ENCSR219BXP ChIP-seq EFO:0002067 K562 cell line Homo sapiens DPF2-human ENCAB384ZPY DNA False 2017-11-14 ENCODE 3 101 ENCFF245SAZ, ENCFF643CGH, ENCFF952UEN 4796429990 ENCODE Processing Pipeline 94abf25ebbeb2c8640987c0204091f61 https://www.encodeproject.org/files/ENCFF765XMC/@@download/ENCFF765XMC.bam GRCh38 released borderline replicate concordance experiment not submitted to GEO ENCFF408POL bam alignments ENCSR219BXP ChIP-seq EFO:0002067 K562 cell line Homo sapiens DPF2-human ENCAB384ZPY DNA False 2017-11-14 ENCODE 3 101 ENCFF245SAZ, ENCFF643CGH, ENCFF952UEN 4200629403 ENCODE Processing Pipeline 2868d09f6cb3f00bf5b7a13409f225b7 https://www.encodeproject.org/files/ENCFF408POL/@@download/ENCFF408POL.bam GRCh38 released borderline replicate concordance experiment not submitted to GEO ENCFF467MXH bigWig signal p-value ENCSR219BXP ChIP-seq EFO:0002067 K562 cell line Homo sapiens DPF2-human ENCAB384ZPY DNA False 2017-11-14 ENCODE 3 ENCFF227IZS, ENCFF408POL 971212613 ENCODE Processing Pipeline 0b71172773e39fdeb0fb9fa226aac912 https://www.encodeproject.org/files/ENCFF467MXH/@@download/ENCFF467MXH.bigWig GRCh38 released borderline replicate concordance experiment not submitted to GEO ENCFF523QZS bigWig signal p-value ENCSR219BXP ChIP-seq EFO:0002067 K562 cell line Homo sapiens DPF2-human ENCAB384ZPY DNA False 2017-11-14 ENCODE 1, 3 ENCFF227IZS, ENCFF408POL, ENCFF438CHI, ENCFF910IKB 1845962167 ENCODE Processing Pipeline 51c7d7425a444819d92ae3b9f3f32ece https://www.encodeproject.org/files/ENCFF523QZS/@@download/ENCFF523QZS.bigWig GRCh38 released borderline replicate concordance experiment not submitted to GEO ENCFF393NUT bed narrowPeak peaks ENCSR219BXP ChIP-seq EFO:0002067 K562 cell line Homo sapiens DPF2-human ENCAB384ZPY DNA False 2017-11-14 ENCODE 3 ENCFF227IZS, ENCFF408POL 6606668 ENCODE Processing Pipeline b785c57f777cffeacb288b5cd7f9f6c0 https://www.encodeproject.org/files/ENCFF393NUT/@@download/ENCFF393NUT.bed.gz GRCh38 released borderline replicate concordance experiment not submitted to GEO ENCFF181NNL bed narrowPeak conservative idr thresholded peaks ENCSR219BXP ChIP-seq EFO:0002067 K562 cell line Homo sapiens DPF2-human ENCAB384ZPY DNA False 2017-11-14 ENCODE 1, 3 ENCFF393NUT, ENCFF419RSJ, ENCFF622WHS, ENCFF783DBJ 267651 ENCODE Processing Pipeline eb0c6fe3501667bfc78fc91e4ff91835 https://www.encodeproject.org/files/ENCFF181NNL/@@download/ENCFF181NNL.bed.gz GRCh38 released borderline replicate concordance experiment not submitted to GEO ENCFF849JWG bigWig signal p-value ENCSR219BXP ChIP-seq EFO:0002067 K562 cell line Homo sapiens DPF2-human ENCAB384ZPY DNA False 2017-11-14 ENCODE 1 ENCFF438CHI, ENCFF910IKB 1069158149 ENCODE Processing Pipeline 66ccf19c04db56032597016f141c49d5 https://www.encodeproject.org/files/ENCFF849JWG/@@download/ENCFF849JWG.bigWig GRCh38 released borderline replicate concordance experiment not submitted to GEO ENCFF977TQX bigWig fold change over control ENCSR219BXP ChIP-seq EFO:0002067 K562 cell line Homo sapiens DPF2-human ENCAB384ZPY DNA False 2017-11-14 ENCODE 3 ENCFF227IZS, ENCFF408POL 1112411183 ENCODE Processing Pipeline 9a99957859c20221c7e2244c90760b5a https://www.encodeproject.org/files/ENCFF977TQX/@@download/ENCFF977TQX.bigWig GRCh38 released borderline replicate concordance experiment not submitted to GEO ENCFF622WHS bed narrowPeak peaks ENCSR219BXP ChIP-seq EFO:0002067 K562 cell line Homo sapiens DPF2-human ENCAB384ZPY DNA False 2017-11-14 ENCODE 1, 3 ENCFF227IZS, ENCFF408POL, ENCFF438CHI, ENCFF910IKB 7185563 ENCODE Processing Pipeline f2631d5cded93c2f372bc2706ddac124 https://www.encodeproject.org/files/ENCFF622WHS/@@download/ENCFF622WHS.bed.gz GRCh38 released borderline replicate concordance experiment not submitted to GEO ENCFF040KQE bigBed narrowPeak optimal idr thresholded peaks ENCSR219BXP ChIP-seq EFO:0002067 K562 cell line Homo sapiens DPF2-human ENCAB384ZPY DNA False 2017-11-14 ENCODE 1, 3 ENCFF537VKZ 917495 ENCODE Processing Pipeline f400e26337fd598f079f5e430206eaa3 https://www.encodeproject.org/files/ENCFF040KQE/@@download/ENCFF040KQE.bigBed GRCh38 released borderline replicate concordance experiment not submitted to GEO ENCFF783DBJ bed narrowPeak peaks ENCSR219BXP ChIP-seq EFO:0002067 K562 cell line Homo sapiens DPF2-human ENCAB384ZPY DNA False 2017-11-14 ENCODE 1 ENCFF438CHI, ENCFF910IKB 7013151 ENCODE Processing Pipeline 971e86f12e108610f59725100e5366d0 https://www.encodeproject.org/files/ENCFF783DBJ/@@download/ENCFF783DBJ.bed.gz GRCh38 released borderline replicate concordance experiment not submitted to GEO ENCFF246TAS bigBed narrowPeak peaks ENCSR219BXP ChIP-seq EFO:0002067 K562 cell line Homo sapiens DPF2-human ENCAB384ZPY DNA False 2017-11-14 ENCODE 1, 3 ENCFF622WHS 12740307 ENCODE Processing Pipeline f43618feaf58f0532182b770a28dcd51 https://www.encodeproject.org/files/ENCFF246TAS/@@download/ENCFF246TAS.bigBed GRCh38 released borderline replicate concordance experiment not submitted to GEO ENCFF201BJQ bigBed narrowPeak peaks ENCSR219BXP ChIP-seq EFO:0002067 K562 cell line Homo sapiens DPF2-human ENCAB384ZPY DNA False 2017-11-14 ENCODE 1 ENCFF783DBJ 12699697 ENCODE Processing Pipeline 2cfc4a945f01518faf56950c63469e33 https://www.encodeproject.org/files/ENCFF201BJQ/@@download/ENCFF201BJQ.bigBed GRCh38 released borderline replicate concordance experiment not submitted to GEO ENCFF118RGK bigBed narrowPeak peaks ENCSR219BXP ChIP-seq EFO:0002067 K562 cell line Homo sapiens DPF2-human ENCAB384ZPY DNA False 2017-11-14 ENCODE 3 ENCFF393NUT 13199645 ENCODE Processing Pipeline 34533da7578f43a27b401fb6875c748d https://www.encodeproject.org/files/ENCFF118RGK/@@download/ENCFF118RGK.bigBed GRCh38 released borderline replicate concordance experiment not submitted to GEO ENCFF440EJU bigBed narrowPeak conservative idr thresholded peaks ENCSR219BXP ChIP-seq EFO:0002067 K562 cell line Homo sapiens DPF2-human ENCAB384ZPY DNA False 2017-11-14 ENCODE 1, 3 ENCFF181NNL 621700 ENCODE Processing Pipeline bb0838ff7432440c25a66d9bdc82f2b8 https://www.encodeproject.org/files/ENCFF440EJU/@@download/ENCFF440EJU.bigBed GRCh38 released borderline replicate concordance experiment not submitted to GEO ENCFF537VKZ bed narrowPeak optimal idr thresholded peaks ENCSR219BXP ChIP-seq EFO:0002067 K562 cell line Homo sapiens DPF2-human ENCAB384ZPY DNA False 2017-11-14 ENCODE 1, 3 ENCFF393NUT, ENCFF419RSJ, ENCFF622WHS, ENCFF783DBJ 456441 ENCODE Processing Pipeline 4576691925fb5ba9366e3c4086bd14b2 https://www.encodeproject.org/files/ENCFF537VKZ/@@download/ENCFF537VKZ.bed.gz GRCh38 released borderline replicate concordance experiment not submitted to GEO ENCFF229QVC bigWig fold change over control ENCSR219BXP ChIP-seq EFO:0002067 K562 cell line Homo sapiens DPF2-human ENCAB384ZPY DNA False 2017-11-14 ENCODE 1 ENCFF438CHI, ENCFF910IKB 1056174841 ENCODE Processing Pipeline 6db6ba88a48948fa0add6485b521ae4d https://www.encodeproject.org/files/ENCFF229QVC/@@download/ENCFF229QVC.bigWig GRCh38 released borderline replicate concordance experiment not submitted to GEO ENCFF747XEM bigWig fold change over control ENCSR219BXP ChIP-seq EFO:0002067 K562 cell line Homo sapiens DPF2-human ENCAB384ZPY DNA False 2017-11-14 ENCODE 1, 3 ENCFF227IZS, ENCFF408POL, ENCFF438CHI, ENCFF910IKB 2037812647 ENCODE Processing Pipeline 0f30d7cfefe6ac8f3aff1c1d49d99394 https://www.encodeproject.org/files/ENCFF747XEM/@@download/ENCFF747XEM.bigWig GRCh38 released borderline replicate concordance experiment not submitted to GEO ENCFF802BAC bigWig signal p-value ENCSR219BXP ChIP-seq EFO:0002067 K562 cell line Homo sapiens DPF2-human ENCAB384ZPY DNA False 2017-11-14 ENCODE 3 ENCFF051LWI, ENCFF949SZU 1116164107 ENCODE Processing Pipeline 975100dccf12bc92287fda9c40cf9647 https://www.encodeproject.org/files/ENCFF802BAC/@@download/ENCFF802BAC.bigWig hg19 released borderline replicate concordance experiment not submitted to GEO ENCFF400FLC bed narrowPeak peaks ENCSR219BXP ChIP-seq EFO:0002067 K562 cell line Homo sapiens DPF2-human ENCAB384ZPY DNA False 2017-11-14 ENCODE 1 ENCFF581ZJL, ENCFF814UHO 7085731 ENCODE Processing Pipeline fb326ecec20c455e0db75b1b0834f938 https://www.encodeproject.org/files/ENCFF400FLC/@@download/ENCFF400FLC.bed.gz hg19 released borderline replicate concordance experiment not submitted to GEO ENCFF598KOI bigBed narrowPeak peaks ENCSR219BXP ChIP-seq EFO:0002067 K562 cell line Homo sapiens DPF2-human ENCAB384ZPY DNA False 2017-11-14 ENCODE 3 ENCFF403MEX 13188503 ENCODE Processing Pipeline 2f8e163955adef1da5ecdc04abe5aa3d https://www.encodeproject.org/files/ENCFF598KOI/@@download/ENCFF598KOI.bigBed hg19 released borderline replicate concordance experiment not submitted to GEO ENCFF663KFV bed narrowPeak conservative idr thresholded peaks ENCSR219BXP ChIP-seq EFO:0002067 K562 cell line Homo sapiens DPF2-human ENCAB384ZPY DNA False 2017-11-14 ENCODE 1, 3 ENCFF001TDO, ENCFF209OUR, ENCFF400FLC, ENCFF403MEX 279195 ENCODE Processing Pipeline 60312cd43e0af0f5a7f1af7525cfc229 https://www.encodeproject.org/files/ENCFF663KFV/@@download/ENCFF663KFV.bed.gz hg19 released borderline replicate concordance experiment not submitted to GEO ENCFF962LRB bigBed narrowPeak conservative idr thresholded peaks ENCSR219BXP ChIP-seq EFO:0002067 K562 cell line Homo sapiens DPF2-human ENCAB384ZPY DNA False 2017-11-14 ENCODE 1, 3 ENCFF663KFV 637355 ENCODE Processing Pipeline 366ecfb2de304d10f19cf5f33eab6739 https://www.encodeproject.org/files/ENCFF962LRB/@@download/ENCFF962LRB.bigBed hg19 released borderline replicate concordance experiment not submitted to GEO ENCFF269EWV bigWig signal p-value ENCSR219BXP ChIP-seq EFO:0002067 K562 cell line Homo sapiens DPF2-human ENCAB384ZPY DNA False 2017-11-14 ENCODE 1 ENCFF581ZJL, ENCFF814UHO 1102924357 ENCODE Processing Pipeline ee3cbaef41465ee7ca4590c913f98c0e https://www.encodeproject.org/files/ENCFF269EWV/@@download/ENCFF269EWV.bigWig hg19 released borderline replicate concordance experiment not submitted to GEO ENCFF258EEY bigWig fold change over control ENCSR219BXP ChIP-seq EFO:0002067 K562 cell line Homo sapiens DPF2-human ENCAB384ZPY DNA False 2017-11-14 ENCODE 1 ENCFF581ZJL, ENCFF814UHO 1071646722 ENCODE Processing Pipeline 660b787c4cd137fdbd995a38b4f224a0 https://www.encodeproject.org/files/ENCFF258EEY/@@download/ENCFF258EEY.bigWig hg19 released borderline replicate concordance experiment not submitted to GEO ENCFF387UQS bigWig signal p-value ENCSR219BXP ChIP-seq EFO:0002067 K562 cell line Homo sapiens DPF2-human ENCAB384ZPY DNA False 2017-11-14 ENCODE 1, 3 ENCFF051LWI, ENCFF581ZJL, ENCFF814UHO, ENCFF949SZU 1884256553 ENCODE Processing Pipeline 960b7312c07d8432db82cd5b34ea334f https://www.encodeproject.org/files/ENCFF387UQS/@@download/ENCFF387UQS.bigWig hg19 released borderline replicate concordance experiment not submitted to GEO ENCFF686QMR bigWig fold change over control ENCSR219BXP ChIP-seq EFO:0002067 K562 cell line Homo sapiens DPF2-human ENCAB384ZPY DNA False 2017-11-14 ENCODE 3 ENCFF051LWI, ENCFF949SZU 1112829093 ENCODE Processing Pipeline 926d9fd4f5bdaa542ec1e27d4531e0fb https://www.encodeproject.org/files/ENCFF686QMR/@@download/ENCFF686QMR.bigWig hg19 released borderline replicate concordance experiment not submitted to GEO ENCFF209OUR bed narrowPeak peaks ENCSR219BXP ChIP-seq EFO:0002067 K562 cell line Homo sapiens DPF2-human ENCAB384ZPY DNA False 2017-11-14 ENCODE 1, 3 ENCFF051LWI, ENCFF581ZJL, ENCFF814UHO, ENCFF949SZU 7233834 ENCODE Processing Pipeline 657cf754464275113085ecf74d134c93 https://www.encodeproject.org/files/ENCFF209OUR/@@download/ENCFF209OUR.bed.gz hg19 released borderline replicate concordance experiment not submitted to GEO ENCFF863TCQ bigWig fold change over control ENCSR219BXP ChIP-seq EFO:0002067 K562 cell line Homo sapiens DPF2-human ENCAB384ZPY DNA False 2017-11-14 ENCODE 1, 3 ENCFF051LWI, ENCFF581ZJL, ENCFF814UHO, ENCFF949SZU 1993382494 ENCODE Processing Pipeline c24ba533be0e38405b8802ac7f5e116d https://www.encodeproject.org/files/ENCFF863TCQ/@@download/ENCFF863TCQ.bigWig hg19 released borderline replicate concordance experiment not submitted to GEO ENCFF774QKS bed narrowPeak optimal idr thresholded peaks ENCSR219BXP ChIP-seq EFO:0002067 K562 cell line Homo sapiens DPF2-human ENCAB384ZPY DNA False 2017-11-14 ENCODE 1, 3 ENCFF001TDO, ENCFF209OUR, ENCFF400FLC, ENCFF403MEX 479386 ENCODE Processing Pipeline cc53d3d9760a5e427276184bfc555bbe https://www.encodeproject.org/files/ENCFF774QKS/@@download/ENCFF774QKS.bed.gz hg19 released borderline replicate concordance experiment not submitted to GEO ENCFF403MEX bed narrowPeak peaks ENCSR219BXP ChIP-seq EFO:0002067 K562 cell line Homo sapiens DPF2-human ENCAB384ZPY DNA False 2017-11-14 ENCODE 3 ENCFF051LWI, ENCFF949SZU 6602302 ENCODE Processing Pipeline 7d86383e5b202945b3db2e73cdce2667 https://www.encodeproject.org/files/ENCFF403MEX/@@download/ENCFF403MEX.bed.gz hg19 released borderline replicate concordance experiment not submitted to GEO ENCFF914MTE bigBed narrowPeak peaks ENCSR219BXP ChIP-seq EFO:0002067 K562 cell line Homo sapiens DPF2-human ENCAB384ZPY DNA False 2017-11-14 ENCODE 1 ENCFF400FLC 12771634 ENCODE Processing Pipeline 19e79f16f036e66155120ee97c5232d6 https://www.encodeproject.org/files/ENCFF914MTE/@@download/ENCFF914MTE.bigBed hg19 released borderline replicate concordance experiment not submitted to GEO ENCFF395AOY bigBed narrowPeak peaks ENCSR219BXP ChIP-seq EFO:0002067 K562 cell line Homo sapiens DPF2-human ENCAB384ZPY DNA False 2017-11-14 ENCODE 1, 3 ENCFF209OUR 12787588 ENCODE Processing Pipeline 8083bbaace281928225265ab6b55ab00 https://www.encodeproject.org/files/ENCFF395AOY/@@download/ENCFF395AOY.bigBed hg19 released borderline replicate concordance experiment not submitted to GEO ENCFF418VGR bigBed narrowPeak optimal idr thresholded peaks ENCSR219BXP ChIP-seq EFO:0002067 K562 cell line Homo sapiens DPF2-human ENCAB384ZPY DNA False 2017-11-14 ENCODE 1, 3 ENCFF774QKS 945322 ENCODE Processing Pipeline 50f198bdc7641d9e165957ae66605db2 https://www.encodeproject.org/files/ENCFF418VGR/@@download/ENCFF418VGR.bigBed hg19 released borderline replicate concordance experiment not submitted to GEO ENCFF000CBW bigBed broadPeak peaks ENCSR000AUT ChIP-seq EFO:0002067 K562 cell line Homo sapiens SETDB1-human ENCAB000AKP DNA see document see document False 2012-08-06 ENCODE ENCFF001TAD 1094734 Bradley Bernstein, Broad d44aa4cc2c3cab602fbeffb21c142e10 https://www.encodeproject.org/files/ENCFF000CBW/@@download/ENCFF000CBW.bigBed hg19 archived control low read depth, inconsistent platforms, low read length ENCFF000CBX bam alignments ENCSR000AUT ChIP-seq EFO:0002067 K562 cell line Homo sapiens SETDB1-human ENCAB000AKP DNA see document see document False 2012-08-06 ENCODE 1 ENCFF000CCG 1334949559 Bradley Bernstein, Broad 726370ea7ee05faff9636fcd1a04f5a3 https://www.encodeproject.org/files/ENCFF000CBX/@@download/ENCFF000CBX.bam hg19 archived control low read depth, inconsistent platforms, low read length ENCFF000CBY bigWig signal ENCSR000AUT ChIP-seq EFO:0002067 K562 cell line Homo sapiens SETDB1-human ENCAB000AKP DNA see document see document False 2012-08-06 ENCODE 447582643 Bradley Bernstein, Broad d83921d6ff6802bf3fc9ae53fd17c3bb https://www.encodeproject.org/files/ENCFF000CBY/@@download/ENCFF000CBY.bigWig hg19 archived control low read depth, inconsistent platforms, low read length missing derived_from ENCFF000CCG fastq reads ENCSR000AUT ChIP-seq EFO:0002067 K562 cell line Homo sapiens SETDB1-human ENCAB000AKP DNA see document see document False 2012-08-06 ENCODE 1 1 36 single-ended 1420331036 Bradley Bernstein, Broad e4c1de88c85d2bf01bb031e64c425eb1 https://www.encodeproject.org/files/ENCFF000CCG/@@download/ENCFF000CCG.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000BWK/ released control low read depth, inconsistent platforms, low read length ENCFF001TAD bed broadPeak peaks ENCSR000AUT ChIP-seq EFO:0002067 K562 cell line Homo sapiens SETDB1-human ENCAB000AKP DNA see document see document False 2012-08-06 ENCODE 628582 Bradley Bernstein, Broad 0efbf96719a76c17c4d2213cb1984d3e https://www.encodeproject.org/files/ENCFF001TAD/@@download/ENCFF001TAD.bed.gz hg19 archived control low read depth, inconsistent platforms, low read length missing derived_from ENCFF080YTJ bam unfiltered alignments ENCSR000AUT ChIP-seq EFO:0002067 K562 cell line Homo sapiens SETDB1-human ENCAB000AKP DNA see document see document False 2012-08-06 ENCODE 1 36 ENCFF000CCG, ENCFF807MUK 1829885589 ENCODE Processing Pipeline 6441273280bdec44026971de8228bdc3 https://www.encodeproject.org/files/ENCFF080YTJ/@@download/ENCFF080YTJ.bam hg19 released control low read depth, inconsistent platforms, low read length ENCFF693CKU bam alignments ENCSR000AUT ChIP-seq EFO:0002067 K562 cell line Homo sapiens SETDB1-human ENCAB000AKP DNA see document see document False 2012-08-06 ENCODE 1 36 ENCFF000CCG, ENCFF807MUK 1092910807 ENCODE Processing Pipeline c6e5d3cc485062d9a3123ef3cdae999a https://www.encodeproject.org/files/ENCFF693CKU/@@download/ENCFF693CKU.bam hg19 released control low read depth, inconsistent platforms, low read length ENCFF244MAQ bam alignments ENCSR000AUT ChIP-seq EFO:0002067 K562 cell line Homo sapiens SETDB1-human ENCAB000AKP DNA see document see document False 2012-08-06 ENCODE 1 36 ENCFF000CCG, ENCFF643CGH 1092310548 ENCODE Processing Pipeline b4c13f4a912db6a00253f12ddbea3549 https://www.encodeproject.org/files/ENCFF244MAQ/@@download/ENCFF244MAQ.bam GRCh38 released control low read depth, inconsistent platforms, low read length ENCFF424MSI bam unfiltered alignments ENCSR000AUT ChIP-seq EFO:0002067 K562 cell line Homo sapiens SETDB1-human ENCAB000AKP DNA see document see document False 2012-08-06 ENCODE 1 36 ENCFF000CCG, ENCFF643CGH 1841208472 ENCODE Processing Pipeline 805cd4c34653f5c8ecfdceab14858529 https://www.encodeproject.org/files/ENCFF424MSI/@@download/ENCFF424MSI.bam GRCh38 released control low read depth, inconsistent platforms, low read length ENCFF554KGC bigWig signal p-value ENCSR000AUT ChIP-seq EFO:0002067 K562 cell line Homo sapiens SETDB1-human ENCAB000AKP DNA see document see document False 2012-08-06 ENCODE 1 ENCFF574XYY, ENCFF693CKU 371489959 ENCODE Processing Pipeline 8bc350778fa6d20d342ead51bc6cf23a https://www.encodeproject.org/files/ENCFF554KGC/@@download/ENCFF554KGC.bigWig hg19 released control low read depth, inconsistent platforms, low read length ENCFF101AKQ bed narrowPeak peaks ENCSR000AUT ChIP-seq EFO:0002067 K562 cell line Homo sapiens SETDB1-human ENCAB000AKP DNA see document see document False 2012-08-06 ENCODE 1 ENCFF244MAQ, ENCFF392XRJ 4786243 ENCODE Processing Pipeline 891067dbd363d4d884d9ad25083196a0 https://www.encodeproject.org/files/ENCFF101AKQ/@@download/ENCFF101AKQ.bed.gz GRCh38 released control low read depth, inconsistent platforms, low read length ENCFF326EXY bigBed narrowPeak peaks ENCSR000AUT ChIP-seq EFO:0002067 K562 cell line Homo sapiens SETDB1-human ENCAB000AKP DNA see document see document False 2012-08-06 ENCODE 1 ENCFF101AKQ 11048705 ENCODE Processing Pipeline 4cbc6872303d9f19481dabeb222cb904 https://www.encodeproject.org/files/ENCFF326EXY/@@download/ENCFF326EXY.bigBed GRCh38 released control low read depth, inconsistent platforms, low read length ENCFF697TRA bigWig fold change over control ENCSR000AUT ChIP-seq EFO:0002067 K562 cell line Homo sapiens SETDB1-human ENCAB000AKP DNA see document see document False 2012-08-06 ENCODE 1 ENCFF574XYY, ENCFF693CKU 422385569 ENCODE Processing Pipeline dbc239713de04fc940fa2fb8e00fd19e https://www.encodeproject.org/files/ENCFF697TRA/@@download/ENCFF697TRA.bigWig hg19 released control low read depth, inconsistent platforms, low read length ENCFF333VJJ bed narrowPeak peaks ENCSR000AUT ChIP-seq EFO:0002067 K562 cell line Homo sapiens SETDB1-human ENCAB000AKP DNA see document see document False 2012-08-06 ENCODE 1 ENCFF574XYY, ENCFF693CKU 4843631 ENCODE Processing Pipeline 9d4599c7a81186ca87e0b18ec19be86f https://www.encodeproject.org/files/ENCFF333VJJ/@@download/ENCFF333VJJ.bed.gz hg19 released control low read depth, inconsistent platforms, low read length ENCFF950GVK bigBed narrowPeak pseudoreplicated idr thresholded peaks ENCSR000AUT ChIP-seq EFO:0002067 K562 cell line Homo sapiens SETDB1-human ENCAB000AKP DNA see document see document False 2012-08-06 ENCODE 1 ENCFF095WDB 132760 ENCODE Processing Pipeline a7d20ae734008103f6bcb49371b1f594 https://www.encodeproject.org/files/ENCFF950GVK/@@download/ENCFF950GVK.bigBed hg19 released control low read depth, inconsistent platforms, low read length ENCFF100AEJ bigWig fold change over control ENCSR000AUT ChIP-seq EFO:0002067 K562 cell line Homo sapiens SETDB1-human ENCAB000AKP DNA see document see document False 2012-08-06 ENCODE 1 ENCFF244MAQ, ENCFF392XRJ 424088756 ENCODE Processing Pipeline 837b1ef39b2030de05d3c81794e9e6fe https://www.encodeproject.org/files/ENCFF100AEJ/@@download/ENCFF100AEJ.bigWig GRCh38 released control low read depth, inconsistent platforms, low read length ENCFF215HAP bed narrowPeak pseudoreplicated idr thresholded peaks ENCSR000AUT ChIP-seq EFO:0002067 K562 cell line Homo sapiens SETDB1-human ENCAB000AKP DNA see document see document False 2012-08-06 ENCODE 1 ENCFF101AKQ, ENCFF419RSJ 35312 ENCODE Processing Pipeline 1764cd06cae0f8c7eb431a556791638a https://www.encodeproject.org/files/ENCFF215HAP/@@download/ENCFF215HAP.bed.gz GRCh38 released control low read depth, inconsistent platforms, low read length ENCFF797EHT bigBed narrowPeak peaks ENCSR000AUT ChIP-seq EFO:0002067 K562 cell line Homo sapiens SETDB1-human ENCAB000AKP DNA see document see document False 2012-08-06 ENCODE 1 ENCFF333VJJ 11049851 ENCODE Processing Pipeline 453c5359865146f4b54205df32c7a59b https://www.encodeproject.org/files/ENCFF797EHT/@@download/ENCFF797EHT.bigBed hg19 released control low read depth, inconsistent platforms, low read length ENCFF095WDB bed narrowPeak pseudoreplicated idr thresholded peaks ENCSR000AUT ChIP-seq EFO:0002067 K562 cell line Homo sapiens SETDB1-human ENCAB000AKP DNA see document see document False 2012-08-06 ENCODE 1 ENCFF001TDO, ENCFF333VJJ 33315 ENCODE Processing Pipeline d915e632e6f6ce92b786fe167b7ed538 https://www.encodeproject.org/files/ENCFF095WDB/@@download/ENCFF095WDB.bed.gz hg19 released control low read depth, inconsistent platforms, low read length ENCFF431KGM bigWig signal p-value ENCSR000AUT ChIP-seq EFO:0002067 K562 cell line Homo sapiens SETDB1-human ENCAB000AKP DNA see document see document False 2012-08-06 ENCODE 1 ENCFF244MAQ, ENCFF392XRJ 371292349 ENCODE Processing Pipeline 25291a945cb14cb40c22b0d5beed7ce8 https://www.encodeproject.org/files/ENCFF431KGM/@@download/ENCFF431KGM.bigWig GRCh38 released control low read depth, inconsistent platforms, low read length ENCFF937KSU bigBed narrowPeak pseudoreplicated idr thresholded peaks ENCSR000AUT ChIP-seq EFO:0002067 K562 cell line Homo sapiens SETDB1-human ENCAB000AKP DNA see document see document False 2012-08-06 ENCODE 1 ENCFF215HAP 140320 ENCODE Processing Pipeline e0df883bc7ee5c5b5d01ef4b44785a85 https://www.encodeproject.org/files/ENCFF937KSU/@@download/ENCFF937KSU.bigBed GRCh38 released control low read depth, inconsistent platforms, low read length ENCFF017HJV fastq reads ENCSR377BLZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens GTF2F1-human ENCAB108WPN DNA SDS formaldehyde False 2018-01-16 ENCODE 2 1 40 single-ended 399762768 Xiang-Dong Fu, UCSD 9ffbf148e4b6daa3489aca0af4417326 https://www.encodeproject.org/files/ENCFF017HJV/@@download/ENCFF017HJV.fastq.gz Illumina HiSeq 2000 /files/ENCFF343MYT/ released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF941PUJ fastq reads ENCSR377BLZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens GTF2F1-human ENCAB108WPN DNA SDS formaldehyde False 2018-01-16 ENCODE 1 1 40 single-ended 390864479 Xiang-Dong Fu, UCSD c2c2506419743666df8c338ddf5f9e34 https://www.encodeproject.org/files/ENCFF941PUJ/@@download/ENCFF941PUJ.fastq.gz Illumina HiSeq 2000 /files/ENCFF521UDO/ released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF891ODG fastq reads ENCSR377BLZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens GTF2F1-human ENCAB108WPN DNA SDS formaldehyde False 2018-01-16 ENCODE 1 1 40 single-ended 1304137662 Xiang-Dong Fu, UCSD 79b42c2641db8740253271522caf1cd9 https://www.encodeproject.org/files/ENCFF891ODG/@@download/ENCFF891ODG.fastq.gz Illumina HiSeq 2500 /files/ENCFF521UDO/ released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF575ZZC fastq reads ENCSR377BLZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens GTF2F1-human ENCAB108WPN DNA SDS formaldehyde False 2018-01-16 ENCODE 2 1 40 single-ended 882572168 Xiang-Dong Fu, UCSD 1de92c200071ed8aa31bd223a394f429 https://www.encodeproject.org/files/ENCFF575ZZC/@@download/ENCFF575ZZC.fastq.gz Illumina HiSeq 2500 /files/ENCFF343MYT/ released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF048FZJ bam unfiltered alignments ENCSR377BLZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens GTF2F1-human ENCAB108WPN DNA SDS formaldehyde False 2018-01-16 ENCODE 2 40 ENCFF017HJV, ENCFF575ZZC, ENCFF807MUK 1305373580 ENCODE Processing Pipeline 1cd6de93db785799d7dd8329cf814987 https://www.encodeproject.org/files/ENCFF048FZJ/@@download/ENCFF048FZJ.bam hg19 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF701MHQ bam unfiltered alignments ENCSR377BLZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens GTF2F1-human ENCAB108WPN DNA SDS formaldehyde False 2018-01-16 ENCODE 2 40 ENCFF017HJV, ENCFF575ZZC, ENCFF643CGH 1311330453 ENCODE Processing Pipeline fa9f11ba092177b51835c9fff78696a7 https://www.encodeproject.org/files/ENCFF701MHQ/@@download/ENCFF701MHQ.bam GRCh38 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF922DRF bam alignments ENCSR377BLZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens GTF2F1-human ENCAB108WPN DNA SDS formaldehyde False 2018-01-16 ENCODE 2 40 ENCFF017HJV, ENCFF575ZZC, ENCFF643CGH 449587093 ENCODE Processing Pipeline ac415eff7a1918b44ef4440f810e0713 https://www.encodeproject.org/files/ENCFF922DRF/@@download/ENCFF922DRF.bam GRCh38 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF044MLU bam alignments ENCSR377BLZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens GTF2F1-human ENCAB108WPN DNA SDS formaldehyde False 2018-01-16 ENCODE 2 40 ENCFF017HJV, ENCFF575ZZC, ENCFF807MUK 450248431 ENCODE Processing Pipeline 03a0b51540cb6dc793ca77ec01910509 https://www.encodeproject.org/files/ENCFF044MLU/@@download/ENCFF044MLU.bam hg19 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF353XLY bam alignments ENCSR377BLZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens GTF2F1-human ENCAB108WPN DNA SDS formaldehyde False 2018-01-16 ENCODE 1 40 ENCFF807MUK, ENCFF891ODG, ENCFF941PUJ 410591625 ENCODE Processing Pipeline 1246520b65a0c66e92f2e1f7ff3e77cb https://www.encodeproject.org/files/ENCFF353XLY/@@download/ENCFF353XLY.bam hg19 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF978UGE bam alignments ENCSR377BLZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens GTF2F1-human ENCAB108WPN DNA SDS formaldehyde False 2018-01-16 ENCODE 1 40 ENCFF643CGH, ENCFF891ODG, ENCFF941PUJ 409970317 ENCODE Processing Pipeline 04f099e9cf78d24173e08dfa6357e44c https://www.encodeproject.org/files/ENCFF978UGE/@@download/ENCFF978UGE.bam GRCh38 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF451DOD bam unfiltered alignments ENCSR377BLZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens GTF2F1-human ENCAB108WPN DNA SDS formaldehyde False 2018-01-16 ENCODE 1 40 ENCFF807MUK, ENCFF891ODG, ENCFF941PUJ 1696276346 ENCODE Processing Pipeline 114762e12b0c981c5ce4bcf19fa9a79d https://www.encodeproject.org/files/ENCFF451DOD/@@download/ENCFF451DOD.bam hg19 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF961LDM bam unfiltered alignments ENCSR377BLZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens GTF2F1-human ENCAB108WPN DNA SDS formaldehyde False 2018-01-16 ENCODE 1 40 ENCFF643CGH, ENCFF891ODG, ENCFF941PUJ 1703401509 ENCODE Processing Pipeline a9f0dd466bdd7fc40de8abc3400e69d6 https://www.encodeproject.org/files/ENCFF961LDM/@@download/ENCFF961LDM.bam GRCh38 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF087KCE bigWig signal p-value ENCSR377BLZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens GTF2F1-human ENCAB108WPN DNA SDS formaldehyde False 2018-01-16 ENCODE 2 ENCFF584ERB, ENCFF922DRF 505048176 ENCODE Processing Pipeline d0b27c8b1c858dfe9838639a734d1732 https://www.encodeproject.org/files/ENCFF087KCE/@@download/ENCFF087KCE.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF487RXG bigWig fold change over control ENCSR377BLZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens GTF2F1-human ENCAB108WPN DNA SDS formaldehyde False 2018-01-16 ENCODE 1, 2 ENCFF092OLM, ENCFF584ERB, ENCFF922DRF, ENCFF978UGE 735137736 ENCODE Processing Pipeline 2e9bcd6fef36f0a8af9fcf5d0fdae74a https://www.encodeproject.org/files/ENCFF487RXG/@@download/ENCFF487RXG.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF983IEF bigBed narrowPeak peaks ENCSR377BLZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens GTF2F1-human ENCAB108WPN DNA SDS formaldehyde False 2018-01-16 ENCODE 1 ENCFF174VAD 13133717 ENCODE Processing Pipeline a556e036e00845e70addba142c0caca4 https://www.encodeproject.org/files/ENCFF983IEF/@@download/ENCFF983IEF.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF306IYE bigBed narrowPeak peaks ENCSR377BLZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens GTF2F1-human ENCAB108WPN DNA SDS formaldehyde False 2018-01-16 ENCODE 2 ENCFF007SLK 13005010 ENCODE Processing Pipeline 03e975d164fc32b7abc3339c4cbaded5 https://www.encodeproject.org/files/ENCFF306IYE/@@download/ENCFF306IYE.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF007SLK bed narrowPeak peaks ENCSR377BLZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens GTF2F1-human ENCAB108WPN DNA SDS formaldehyde False 2018-01-16 ENCODE 2 ENCFF584ERB, ENCFF922DRF 5575079 ENCODE Processing Pipeline f5046db35b5a59e28eb928d9a692091a https://www.encodeproject.org/files/ENCFF007SLK/@@download/ENCFF007SLK.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF160QWL bed narrowPeak conservative idr thresholded peaks ENCSR377BLZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens GTF2F1-human ENCAB108WPN DNA SDS formaldehyde False 2018-01-16 ENCODE 1, 2 ENCFF007SLK, ENCFF174VAD, ENCFF220GUZ, ENCFF419RSJ 246483 ENCODE Processing Pipeline 64c8530bbe6649f80bf7dd2e6bd74586 https://www.encodeproject.org/files/ENCFF160QWL/@@download/ENCFF160QWL.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF220GUZ bed narrowPeak peaks ENCSR377BLZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens GTF2F1-human ENCAB108WPN DNA SDS formaldehyde False 2018-01-16 ENCODE 1, 2 ENCFF092OLM, ENCFF584ERB, ENCFF922DRF, ENCFF978UGE 6578278 ENCODE Processing Pipeline ea15993e95bc523f3621dd1c149ed704 https://www.encodeproject.org/files/ENCFF220GUZ/@@download/ENCFF220GUZ.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF843UHP bed narrowPeak optimal idr thresholded peaks ENCSR377BLZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens GTF2F1-human ENCAB108WPN DNA SDS formaldehyde False 2018-01-16 ENCODE 1, 2 ENCFF007SLK, ENCFF174VAD, ENCFF220GUZ, ENCFF419RSJ 269256 ENCODE Processing Pipeline e1965b4b42bacc9d61965c3981c66dc1 https://www.encodeproject.org/files/ENCFF843UHP/@@download/ENCFF843UHP.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF095CXR bigWig signal p-value ENCSR377BLZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens GTF2F1-human ENCAB108WPN DNA SDS formaldehyde False 2018-01-16 ENCODE 1 ENCFF092OLM, ENCFF978UGE 500223994 ENCODE Processing Pipeline d7c2c8a0ec411d17e5e5d69a9ba2363f https://www.encodeproject.org/files/ENCFF095CXR/@@download/ENCFF095CXR.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF568WKA bigWig fold change over control ENCSR377BLZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens GTF2F1-human ENCAB108WPN DNA SDS formaldehyde False 2018-01-16 ENCODE 1 ENCFF092OLM, ENCFF978UGE 308144369 ENCODE Processing Pipeline ee94d014f50b2edaf3496276ff4a896d https://www.encodeproject.org/files/ENCFF568WKA/@@download/ENCFF568WKA.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF956OKI bigWig fold change over control ENCSR377BLZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens GTF2F1-human ENCAB108WPN DNA SDS formaldehyde False 2018-01-16 ENCODE 2 ENCFF584ERB, ENCFF922DRF 334215781 ENCODE Processing Pipeline c8a7fdd399dc6bbfd5550731644039fd https://www.encodeproject.org/files/ENCFF956OKI/@@download/ENCFF956OKI.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF722UZR bigBed narrowPeak peaks ENCSR377BLZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens GTF2F1-human ENCAB108WPN DNA SDS formaldehyde False 2018-01-16 ENCODE 1, 2 ENCFF220GUZ 13210341 ENCODE Processing Pipeline e5e5ad47d08a3d86616b4290ca754a7c https://www.encodeproject.org/files/ENCFF722UZR/@@download/ENCFF722UZR.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF560EAV bigWig signal p-value ENCSR377BLZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens GTF2F1-human ENCAB108WPN DNA SDS formaldehyde False 2018-01-16 ENCODE 1, 2 ENCFF092OLM, ENCFF584ERB, ENCFF922DRF, ENCFF978UGE 916619198 ENCODE Processing Pipeline 3f99fdf898a746d156b31c231b5b71b7 https://www.encodeproject.org/files/ENCFF560EAV/@@download/ENCFF560EAV.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF174VAD bed narrowPeak peaks ENCSR377BLZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens GTF2F1-human ENCAB108WPN DNA SDS formaldehyde False 2018-01-16 ENCODE 1 ENCFF092OLM, ENCFF978UGE 5389690 ENCODE Processing Pipeline 84b89e366aa45f7b68aa6d041cf2163b https://www.encodeproject.org/files/ENCFF174VAD/@@download/ENCFF174VAD.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF349KZR bigBed narrowPeak conservative idr thresholded peaks ENCSR377BLZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens GTF2F1-human ENCAB108WPN DNA SDS formaldehyde False 2018-01-16 ENCODE 1, 2 ENCFF160QWL 554192 ENCODE Processing Pipeline cc1f7840b8386b8b8b5192f919487972 https://www.encodeproject.org/files/ENCFF349KZR/@@download/ENCFF349KZR.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF501ZHS bigBed narrowPeak optimal idr thresholded peaks ENCSR377BLZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens GTF2F1-human ENCAB108WPN DNA SDS formaldehyde False 2018-01-16 ENCODE 1, 2 ENCFF843UHP 587863 ENCODE Processing Pipeline 9158934aadb43465961782745c4334cf https://www.encodeproject.org/files/ENCFF501ZHS/@@download/ENCFF501ZHS.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF170CBW bigWig signal p-value ENCSR377BLZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens GTF2F1-human ENCAB108WPN DNA SDS formaldehyde False 2018-01-16 ENCODE 1 ENCFF177GKX, ENCFF353XLY 444662061 ENCODE Processing Pipeline c73199d45265dba2d8313433919f6b5e https://www.encodeproject.org/files/ENCFF170CBW/@@download/ENCFF170CBW.bigWig hg19 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF736OTF bigWig fold change over control ENCSR377BLZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens GTF2F1-human ENCAB108WPN DNA SDS formaldehyde False 2018-01-16 ENCODE 1 ENCFF177GKX, ENCFF353XLY 306332169 ENCODE Processing Pipeline c82f89aef919aee5c8cff54ffe731670 https://www.encodeproject.org/files/ENCFF736OTF/@@download/ENCFF736OTF.bigWig hg19 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF637QZJ bigWig signal p-value ENCSR377BLZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens GTF2F1-human ENCAB108WPN DNA SDS formaldehyde False 2018-01-16 ENCODE 2 ENCFF044MLU, ENCFF993VCM 576672016 ENCODE Processing Pipeline ffc3ef581b9723b2c07fd084abc4d008 https://www.encodeproject.org/files/ENCFF637QZJ/@@download/ENCFF637QZJ.bigWig hg19 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF688VZP bigWig signal p-value ENCSR377BLZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens GTF2F1-human ENCAB108WPN DNA SDS formaldehyde False 2018-01-16 ENCODE 1, 2 ENCFF044MLU, ENCFF177GKX, ENCFF353XLY, ENCFF993VCM 1017162184 ENCODE Processing Pipeline 9baeb1dc85aa4c070320546ac14da546 https://www.encodeproject.org/files/ENCFF688VZP/@@download/ENCFF688VZP.bigWig hg19 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF583UDD bed narrowPeak peaks ENCSR377BLZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens GTF2F1-human ENCAB108WPN DNA SDS formaldehyde False 2018-01-16 ENCODE 2 ENCFF044MLU, ENCFF993VCM 5297343 ENCODE Processing Pipeline 700e439b8337491909faa99b1dd3e5b8 https://www.encodeproject.org/files/ENCFF583UDD/@@download/ENCFF583UDD.bed.gz hg19 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF084UEX bigBed narrowPeak peaks ENCSR377BLZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens GTF2F1-human ENCAB108WPN DNA SDS formaldehyde False 2018-01-16 ENCODE 2 ENCFF583UDD 12875716 ENCODE Processing Pipeline 5d749147ba3a49a632a43de602d5fbdd https://www.encodeproject.org/files/ENCFF084UEX/@@download/ENCFF084UEX.bigBed hg19 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF951FOV bigWig fold change over control ENCSR377BLZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens GTF2F1-human ENCAB108WPN DNA SDS formaldehyde False 2018-01-16 ENCODE 1, 2 ENCFF044MLU, ENCFF177GKX, ENCFF353XLY, ENCFF993VCM 757132677 ENCODE Processing Pipeline 18f7a26adfb923ff8fa77b9a07bdebd1 https://www.encodeproject.org/files/ENCFF951FOV/@@download/ENCFF951FOV.bigWig hg19 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF498CHM bed narrowPeak peaks ENCSR377BLZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens GTF2F1-human ENCAB108WPN DNA SDS formaldehyde False 2018-01-16 ENCODE 1 ENCFF177GKX, ENCFF353XLY 5439400 ENCODE Processing Pipeline 7acb46a171c05b14d2af9387c81421f3 https://www.encodeproject.org/files/ENCFF498CHM/@@download/ENCFF498CHM.bed.gz hg19 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF559OHC bed narrowPeak peaks ENCSR377BLZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens GTF2F1-human ENCAB108WPN DNA SDS formaldehyde False 2018-01-16 ENCODE 1, 2 ENCFF044MLU, ENCFF177GKX, ENCFF353XLY, ENCFF993VCM 6599389 ENCODE Processing Pipeline 25f3a8e6c39016bd831ba22cb3d044e1 https://www.encodeproject.org/files/ENCFF559OHC/@@download/ENCFF559OHC.bed.gz hg19 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF801REC bigBed narrowPeak peaks ENCSR377BLZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens GTF2F1-human ENCAB108WPN DNA SDS formaldehyde False 2018-01-16 ENCODE 1 ENCFF498CHM 13115789 ENCODE Processing Pipeline 0f3a9e08d507a138c0fd94dea19e0dad https://www.encodeproject.org/files/ENCFF801REC/@@download/ENCFF801REC.bigBed hg19 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF810LZY bigBed narrowPeak peaks ENCSR377BLZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens GTF2F1-human ENCAB108WPN DNA SDS formaldehyde False 2018-01-16 ENCODE 1, 2 ENCFF559OHC 13174285 ENCODE Processing Pipeline 137f8bcf700c6956aca9045af44fe45f https://www.encodeproject.org/files/ENCFF810LZY/@@download/ENCFF810LZY.bigBed hg19 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF449AHL bed narrowPeak conservative idr thresholded peaks ENCSR377BLZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens GTF2F1-human ENCAB108WPN DNA SDS formaldehyde False 2018-01-16 ENCODE 1, 2 ENCFF001TDO, ENCFF498CHM, ENCFF559OHC, ENCFF583UDD 246575 ENCODE Processing Pipeline cc2c9e746cfd1c45f55cd712de9c7bd9 https://www.encodeproject.org/files/ENCFF449AHL/@@download/ENCFF449AHL.bed.gz hg19 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF246VJH bed narrowPeak optimal idr thresholded peaks ENCSR377BLZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens GTF2F1-human ENCAB108WPN DNA SDS formaldehyde False 2018-01-16 ENCODE 1, 2 ENCFF001TDO, ENCFF498CHM, ENCFF559OHC, ENCFF583UDD 263665 ENCODE Processing Pipeline 73c53958a16e09e0c2ba93843f2da5c4 https://www.encodeproject.org/files/ENCFF246VJH/@@download/ENCFF246VJH.bed.gz hg19 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF452LYW bigBed narrowPeak optimal idr thresholded peaks ENCSR377BLZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens GTF2F1-human ENCAB108WPN DNA SDS formaldehyde False 2018-01-16 ENCODE 1, 2 ENCFF246VJH 577176 ENCODE Processing Pipeline bead8e2c9ff3c65d5094057a1830f37e https://www.encodeproject.org/files/ENCFF452LYW/@@download/ENCFF452LYW.bigBed hg19 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF728FXU bigWig fold change over control ENCSR377BLZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens GTF2F1-human ENCAB108WPN DNA SDS formaldehyde False 2018-01-16 ENCODE 2 ENCFF044MLU, ENCFF993VCM 325702778 ENCODE Processing Pipeline 77f49b69772c16728633dac0ebc2c8be https://www.encodeproject.org/files/ENCFF728FXU/@@download/ENCFF728FXU.bigWig hg19 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF236WUX bigBed narrowPeak conservative idr thresholded peaks ENCSR377BLZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens GTF2F1-human ENCAB108WPN DNA SDS formaldehyde False 2018-01-16 ENCODE 1, 2 ENCFF449AHL 550042 ENCODE Processing Pipeline 126b005a0906dcda8d6a02f992861dee https://www.encodeproject.org/files/ENCFF236WUX/@@download/ENCFF236WUX.bigBed hg19 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF149EMK bam unfiltered alignments ENCSR926KTP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-IRF9-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1 100 ENCFF034WFD, ENCFF183THJ, ENCFF807MUK 5240131473 ENCODE Processing Pipeline 05b2cc261aed6e46d629883527764ab7 https://www.encodeproject.org/files/ENCFF149EMK/@@download/ENCFF149EMK.bam hg19 released missing genetic modification characterization ENCFF652ZJJ bam unfiltered alignments ENCSR926KTP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-IRF9-human ENCAB728YTO DNA False 2016-01-14 ENCODE 2 100 ENCFF137GVE, ENCFF807MUK, ENCFF991EAW 5221978490 ENCODE Processing Pipeline 7ddc904abd90810caa217aef51cbcddd https://www.encodeproject.org/files/ENCFF652ZJJ/@@download/ENCFF652ZJJ.bam hg19 released missing genetic modification characterization ENCFF034WFD fastq reads ENCSR926KTP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-IRF9-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1 1 100 paired-ended 1 ENCFF183THJ 2365889194 Michael Snyder, Stanford a04d2454bfff9baa75d08cc0e0f79f91 SRA:SRR5112317 https://www.encodeproject.org/files/ENCFF034WFD/@@download/ENCFF034WFD.fastq.gz Illumina HiSeq 2000 /files/ENCFF614IRS/ released missing genetic modification characterization ENCFF183THJ fastq reads ENCSR926KTP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-IRF9-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1 1 100 paired-ended 2 ENCFF034WFD 2427136669 Michael Snyder, Stanford a84edbbbfbbed2d71044da378de3e5d3 SRA:SRR5112317 https://www.encodeproject.org/files/ENCFF183THJ/@@download/ENCFF183THJ.fastq.gz Illumina HiSeq 2000 /files/ENCFF817GNU/ released missing genetic modification characterization ENCFF991EAW fastq reads ENCSR926KTP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-IRF9-human ENCAB728YTO DNA False 2016-01-14 ENCODE 2 1 100 paired-ended 2 ENCFF137GVE 2330103678 Michael Snyder, Stanford dcf59952943d96536175822a0ba71904 SRA:SRR5112318 https://www.encodeproject.org/files/ENCFF991EAW/@@download/ENCFF991EAW.fastq.gz Illumina HiSeq 2000 /files/ENCFF817GNU/ released missing genetic modification characterization ENCFF137GVE fastq reads ENCSR926KTP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-IRF9-human ENCAB728YTO DNA False 2016-01-14 ENCODE 2 1 100 paired-ended 1 ENCFF991EAW 2394023937 Michael Snyder, Stanford 04452eaaff844876057d19cab050aee5 SRA:SRR5112318 https://www.encodeproject.org/files/ENCFF137GVE/@@download/ENCFF137GVE.fastq.gz Illumina HiSeq 2000 /files/ENCFF614IRS/ released missing genetic modification characterization ENCFF090MZL bam alignments ENCSR926KTP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-IRF9-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1 100 ENCFF034WFD, ENCFF183THJ, ENCFF807MUK 4344310165 ENCODE Processing Pipeline ee423e3350dfab55522c84d8e4e86479 https://www.encodeproject.org/files/ENCFF090MZL/@@download/ENCFF090MZL.bam hg19 released missing genetic modification characterization ENCFF572JRO bam alignments ENCSR926KTP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-IRF9-human ENCAB728YTO DNA False 2016-01-14 ENCODE 2 100 ENCFF137GVE, ENCFF807MUK, ENCFF991EAW 4142716252 ENCODE Processing Pipeline 2909a498bee2c1df6acc619092ff8853 https://www.encodeproject.org/files/ENCFF572JRO/@@download/ENCFF572JRO.bam hg19 released missing genetic modification characterization ENCFF745VYG bigWig signal p-value ENCSR926KTP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-IRF9-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1 ENCFF090MZL, ENCFF472AKN 1008473777 ENCODE Processing Pipeline e3e8f1dbd78a2bb2b74decdf8536a5ca https://www.encodeproject.org/files/ENCFF745VYG/@@download/ENCFF745VYG.bigWig hg19 released missing genetic modification characterization ENCFF190RLO bigWig fold change over control ENCSR926KTP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-IRF9-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1 ENCFF090MZL, ENCFF472AKN 975787364 ENCODE Processing Pipeline 0559332e500b5d6c5a7a6b1d3126dbd8 https://www.encodeproject.org/files/ENCFF190RLO/@@download/ENCFF190RLO.bigWig hg19 released missing genetic modification characterization ENCFF368NNC bam unfiltered alignments ENCSR926KTP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-IRF9-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1 100 ENCFF034WFD, ENCFF183THJ, ENCFF643CGH 5247376729 ENCODE Processing Pipeline 2f4e277c39b9539eff25d9ba71b11238 https://www.encodeproject.org/files/ENCFF368NNC/@@download/ENCFF368NNC.bam GRCh38 released missing genetic modification characterization ENCFF044WSQ bam unfiltered alignments ENCSR926KTP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-IRF9-human ENCAB728YTO DNA False 2016-01-14 ENCODE 2 100 ENCFF137GVE, ENCFF643CGH, ENCFF991EAW 5229871892 ENCODE Processing Pipeline f084bc39401341a10532c8cd1f8c5bb2 https://www.encodeproject.org/files/ENCFF044WSQ/@@download/ENCFF044WSQ.bam GRCh38 released missing genetic modification characterization ENCFF623MQU bam alignments ENCSR926KTP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-IRF9-human ENCAB728YTO DNA False 2016-01-14 ENCODE 2 100 ENCFF137GVE, ENCFF643CGH, ENCFF991EAW 4144294443 ENCODE Processing Pipeline 69cf75918f12f449c661a24ac8ba0892 https://www.encodeproject.org/files/ENCFF623MQU/@@download/ENCFF623MQU.bam GRCh38 released missing genetic modification characterization ENCFF634KQT bam alignments ENCSR926KTP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-IRF9-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1 100 ENCFF034WFD, ENCFF183THJ, ENCFF643CGH 4346253526 ENCODE Processing Pipeline ecf1f51e364720f75070c9b72ee20e3c https://www.encodeproject.org/files/ENCFF634KQT/@@download/ENCFF634KQT.bam GRCh38 released missing genetic modification characterization ENCFF532VMS bigWig signal p-value ENCSR926KTP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-IRF9-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1 ENCFF634KQT, ENCFF647SZO 1010026021 ENCODE Processing Pipeline 43068c0c149e9cebd7641ec110fafc11 https://www.encodeproject.org/files/ENCFF532VMS/@@download/ENCFF532VMS.bigWig GRCh38 released missing genetic modification characterization ENCFF914VEC bigWig signal p-value ENCSR926KTP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-IRF9-human ENCAB728YTO DNA False 2016-01-14 ENCODE 2 ENCFF623MQU, ENCFF647SZO 866302283 ENCODE Processing Pipeline 96c2c053d6bf04ede5224b3bb831fffb https://www.encodeproject.org/files/ENCFF914VEC/@@download/ENCFF914VEC.bigWig GRCh38 released missing genetic modification characterization ENCFF614JXZ bigWig signal p-value ENCSR926KTP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-IRF9-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF623MQU, ENCFF634KQT, ENCFF647SZO 971911611 ENCODE Processing Pipeline 391984d64743249667d7c989ae4a87e4 https://www.encodeproject.org/files/ENCFF614JXZ/@@download/ENCFF614JXZ.bigWig GRCh38 released missing genetic modification characterization ENCFF749SZE bigWig fold change over control ENCSR926KTP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-IRF9-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1 ENCFF634KQT, ENCFF647SZO 981141571 ENCODE Processing Pipeline 9daa9de4baf7a0bd9b3c7dec7e2f5365 https://www.encodeproject.org/files/ENCFF749SZE/@@download/ENCFF749SZE.bigWig GRCh38 released missing genetic modification characterization ENCFF719UDU bigWig fold change over control ENCSR926KTP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-IRF9-human ENCAB728YTO DNA False 2016-01-14 ENCODE 2 ENCFF623MQU, ENCFF647SZO 905157845 ENCODE Processing Pipeline 8ac16a9705e2b8a7dfbc9cbaa387c70f https://www.encodeproject.org/files/ENCFF719UDU/@@download/ENCFF719UDU.bigWig GRCh38 released missing genetic modification characterization ENCFF340JFR bigWig fold change over control ENCSR926KTP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-IRF9-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF623MQU, ENCFF634KQT, ENCFF647SZO 1483666588 ENCODE Processing Pipeline b530fa1e39e570ac8e6358581d9e048a https://www.encodeproject.org/files/ENCFF340JFR/@@download/ENCFF340JFR.bigWig GRCh38 released missing genetic modification characterization ENCFF945CSK bed narrowPeak peaks ENCSR926KTP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-IRF9-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1 ENCFF634KQT, ENCFF647SZO 6038101 ENCODE Processing Pipeline 69fccc2938f61aece15908d669cb1b01 https://www.encodeproject.org/files/ENCFF945CSK/@@download/ENCFF945CSK.bed.gz GRCh38 released missing genetic modification characterization ENCFF688SPJ bed narrowPeak peaks ENCSR926KTP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-IRF9-human ENCAB728YTO DNA False 2016-01-14 ENCODE 2 ENCFF623MQU, ENCFF647SZO 5966749 ENCODE Processing Pipeline e7ccab97c6560c425c2d6487a2b9d0c9 https://www.encodeproject.org/files/ENCFF688SPJ/@@download/ENCFF688SPJ.bed.gz GRCh38 released missing genetic modification characterization ENCFF754RLJ bed narrowPeak peaks ENCSR926KTP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-IRF9-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF623MQU, ENCFF634KQT, ENCFF647SZO 6910152 ENCODE Processing Pipeline 7a8a84499bc4687e33636cc2591dae5a https://www.encodeproject.org/files/ENCFF754RLJ/@@download/ENCFF754RLJ.bed.gz GRCh38 released missing genetic modification characterization ENCFF436BUJ bigBed narrowPeak peaks ENCSR926KTP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-IRF9-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1 ENCFF945CSK 11271237 ENCODE Processing Pipeline a951840b2f88334214ee48fa2aff12ca https://www.encodeproject.org/files/ENCFF436BUJ/@@download/ENCFF436BUJ.bigBed GRCh38 released missing genetic modification characterization ENCFF794XQA bigBed narrowPeak peaks ENCSR926KTP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-IRF9-human ENCAB728YTO DNA False 2016-01-14 ENCODE 2 ENCFF688SPJ 11178635 ENCODE Processing Pipeline 98825ddb99cc4958a67a55cb14bcbd3a https://www.encodeproject.org/files/ENCFF794XQA/@@download/ENCFF794XQA.bigBed GRCh38 released missing genetic modification characterization ENCFF887VJU bigBed narrowPeak peaks ENCSR926KTP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-IRF9-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF754RLJ 11028929 ENCODE Processing Pipeline 3b5569cd8201f234f922f4879d683ba8 https://www.encodeproject.org/files/ENCFF887VJU/@@download/ENCFF887VJU.bigBed GRCh38 released missing genetic modification characterization ENCFF166MJJ bed narrowPeak conservative idr thresholded peaks ENCSR926KTP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-IRF9-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF419RSJ, ENCFF688SPJ, ENCFF754RLJ, ENCFF945CSK 132744 ENCODE Processing Pipeline 0999afd2ed37c5ba1e7f70ff49716588 https://www.encodeproject.org/files/ENCFF166MJJ/@@download/ENCFF166MJJ.bed.gz GRCh38 released missing genetic modification characterization ENCFF915HLY bigBed narrowPeak conservative idr thresholded peaks ENCSR926KTP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-IRF9-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF166MJJ 302600 ENCODE Processing Pipeline c3566441013270a5350da3f238de9e23 https://www.encodeproject.org/files/ENCFF915HLY/@@download/ENCFF915HLY.bigBed GRCh38 released missing genetic modification characterization ENCFF863WCN bed narrowPeak optimal idr thresholded peaks ENCSR926KTP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-IRF9-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF419RSJ, ENCFF688SPJ, ENCFF754RLJ, ENCFF945CSK 172340 ENCODE Processing Pipeline a10e035162770658df2a39f20f34dc49 https://www.encodeproject.org/files/ENCFF863WCN/@@download/ENCFF863WCN.bed.gz GRCh38 released missing genetic modification characterization ENCFF333FZO bigBed narrowPeak optimal idr thresholded peaks ENCSR926KTP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-IRF9-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF863WCN 360587 ENCODE Processing Pipeline 29106de72eeb306d4d302afc6b68e32c https://www.encodeproject.org/files/ENCFF333FZO/@@download/ENCFF333FZO.bigBed GRCh38 released missing genetic modification characterization ENCFF253CQK bigBed narrowPeak peaks ENCSR926KTP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-IRF9-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1 ENCFF437EBC 11261850 ENCODE Processing Pipeline ed592a3c57b7ffe626f2c2576115bc36 https://www.encodeproject.org/files/ENCFF253CQK/@@download/ENCFF253CQK.bigBed hg19 released missing genetic modification characterization ENCFF396UDO bigBed narrowPeak peaks ENCSR926KTP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-IRF9-human ENCAB728YTO DNA False 2016-01-14 ENCODE 2 ENCFF878TRQ 11157019 ENCODE Processing Pipeline 167a4fe6bbcd09648bbc9610bef63f3a https://www.encodeproject.org/files/ENCFF396UDO/@@download/ENCFF396UDO.bigBed hg19 released missing genetic modification characterization ENCFF579TRW bigBed narrowPeak peaks ENCSR926KTP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-IRF9-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF672YBV 13157265 ENCODE Processing Pipeline 68388ec20d3fb56bb493dd6a457c8b6d https://www.encodeproject.org/files/ENCFF579TRW/@@download/ENCFF579TRW.bigBed hg19 released missing genetic modification characterization ENCFF437EBC bed narrowPeak peaks ENCSR926KTP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-IRF9-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1 ENCFF090MZL, ENCFF472AKN 6044717 ENCODE Processing Pipeline 79c1ec872125b7c061e60ab15a3e95fc https://www.encodeproject.org/files/ENCFF437EBC/@@download/ENCFF437EBC.bed.gz hg19 released missing genetic modification characterization ENCFF672YBV bed narrowPeak peaks ENCSR926KTP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-IRF9-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF090MZL, ENCFF472AKN, ENCFF572JRO 6911844 ENCODE Processing Pipeline e2e7d31e4b98fccede99c91efacc1ffc https://www.encodeproject.org/files/ENCFF672YBV/@@download/ENCFF672YBV.bed.gz hg19 released missing genetic modification characterization ENCFF814QYE bigBed narrowPeak optimal idr thresholded peaks ENCSR926KTP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-IRF9-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF196DHR 365430 ENCODE Processing Pipeline c04d26f13a1ec6f04c1958a5d98d60e4 https://www.encodeproject.org/files/ENCFF814QYE/@@download/ENCFF814QYE.bigBed hg19 released missing genetic modification characterization ENCFF054TAX bigWig fold change over control ENCSR926KTP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-IRF9-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF090MZL, ENCFF472AKN, ENCFF572JRO 1484497341 ENCODE Processing Pipeline c212ec4ed5408b60ba30823493f14b6c https://www.encodeproject.org/files/ENCFF054TAX/@@download/ENCFF054TAX.bigWig hg19 released missing genetic modification characterization ENCFF878TRQ bed narrowPeak peaks ENCSR926KTP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-IRF9-human ENCAB728YTO DNA False 2016-01-14 ENCODE 2 ENCFF472AKN, ENCFF572JRO 5963655 ENCODE Processing Pipeline 9d8706b5041da11aef4b0eed9722590d https://www.encodeproject.org/files/ENCFF878TRQ/@@download/ENCFF878TRQ.bed.gz hg19 released missing genetic modification characterization ENCFF850QMO bed narrowPeak conservative idr thresholded peaks ENCSR926KTP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-IRF9-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF001TDO, ENCFF437EBC, ENCFF672YBV, ENCFF878TRQ 136496 ENCODE Processing Pipeline 7f00bcb2cb9f6253e167186bb42edc00 https://www.encodeproject.org/files/ENCFF850QMO/@@download/ENCFF850QMO.bed.gz hg19 released missing genetic modification characterization ENCFF015XWG bigBed narrowPeak conservative idr thresholded peaks ENCSR926KTP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-IRF9-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF850QMO 303764 ENCODE Processing Pipeline 8e107fba4ea371b00813de3e1990792d https://www.encodeproject.org/files/ENCFF015XWG/@@download/ENCFF015XWG.bigBed hg19 released missing genetic modification characterization ENCFF723YSH bigWig signal p-value ENCSR926KTP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-IRF9-human ENCAB728YTO DNA False 2016-01-14 ENCODE 2 ENCFF472AKN, ENCFF572JRO 875277327 ENCODE Processing Pipeline 001235c4dad85d2af8b9c0e60db8394e https://www.encodeproject.org/files/ENCFF723YSH/@@download/ENCFF723YSH.bigWig hg19 released missing genetic modification characterization ENCFF610XDZ bigWig signal p-value ENCSR926KTP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-IRF9-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF090MZL, ENCFF472AKN, ENCFF572JRO 970563546 ENCODE Processing Pipeline 980d8a29699a465d9f788edf3def71ca https://www.encodeproject.org/files/ENCFF610XDZ/@@download/ENCFF610XDZ.bigWig hg19 released missing genetic modification characterization ENCFF196DHR bed narrowPeak optimal idr thresholded peaks ENCSR926KTP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-IRF9-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF001TDO, ENCFF437EBC, ENCFF672YBV, ENCFF878TRQ 178677 ENCODE Processing Pipeline d604bcfbecd8c71778b4f1843c67dfd9 https://www.encodeproject.org/files/ENCFF196DHR/@@download/ENCFF196DHR.bed.gz hg19 released missing genetic modification characterization ENCFF284QAE bigWig fold change over control ENCSR926KTP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-IRF9-human ENCAB728YTO DNA False 2016-01-14 ENCODE 2 ENCFF472AKN, ENCFF572JRO 921347022 ENCODE Processing Pipeline 37f70cbedf856b4e4665a87669cdd7b5 https://www.encodeproject.org/files/ENCFF284QAE/@@download/ENCFF284QAE.bigWig hg19 released missing genetic modification characterization ENCFF357QBO bam unfiltered alignments ENCSR429QPP ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOXM1-human ENCAB732JFX DNA False 2017-01-27 ENCODE 1 100 ENCFF007LTF, ENCFF167VUS, ENCFF807MUK 3572831476 ENCODE Processing Pipeline aa2b7dcb48ec201c2d70e3399d938813 https://www.encodeproject.org/files/ENCFF357QBO/@@download/ENCFF357QBO.bam hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF720QXY bam unfiltered alignments ENCSR429QPP ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOXM1-human ENCAB732JFX DNA False 2017-01-27 ENCODE 2 100 ENCFF749GVI, ENCFF807MUK, ENCFF888ZYM 5256260071 ENCODE Processing Pipeline df48145a37c7809e3d6e2581dbcc521d https://www.encodeproject.org/files/ENCFF720QXY/@@download/ENCFF720QXY.bam hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF167VUS fastq reads ENCSR429QPP ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOXM1-human ENCAB732JFX DNA False 2017-01-27 ENCODE 1 1 100 paired-ended 1 ENCFF007LTF 1679824935 Michael Snyder, Stanford ef9fb2388cc56b76fd31c5d147d234a5 SRA:SRR6213232 https://www.encodeproject.org/files/ENCFF167VUS/@@download/ENCFF167VUS.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFF/ released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF007LTF fastq reads ENCSR429QPP ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOXM1-human ENCAB732JFX DNA False 2017-01-27 ENCODE 1 1 100 paired-ended 2 ENCFF167VUS 1702967832 Michael Snyder, Stanford 2a345796ea504f230457a8cf1fe4b080 SRA:SRR6213232 https://www.encodeproject.org/files/ENCFF007LTF/@@download/ENCFF007LTF.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFH/ released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF749GVI fastq reads ENCSR429QPP ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOXM1-human ENCAB732JFX DNA False 2017-01-27 ENCODE 2 1 100 paired-ended 2 ENCFF888ZYM 2586265020 Michael Snyder, Stanford d0b0f4b1bf2f3400a2de361a84bf7897 SRA:SRR6213233 https://www.encodeproject.org/files/ENCFF749GVI/@@download/ENCFF749GVI.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFA/ released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF888ZYM fastq reads ENCSR429QPP ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOXM1-human ENCAB732JFX DNA False 2017-01-27 ENCODE 2 1 100 paired-ended 1 ENCFF749GVI 2501909292 Michael Snyder, Stanford 2517665f4c256cbb70cdf9f312fe4f09 SRA:SRR6213233 https://www.encodeproject.org/files/ENCFF888ZYM/@@download/ENCFF888ZYM.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFD/ released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF866PHS bam alignments ENCSR429QPP ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOXM1-human ENCAB732JFX DNA False 2017-01-27 ENCODE 1 100 ENCFF007LTF, ENCFF167VUS, ENCFF807MUK 2595980328 ENCODE Processing Pipeline 799a859df2feaff6aaa6d0683bdcf68a https://www.encodeproject.org/files/ENCFF866PHS/@@download/ENCFF866PHS.bam hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF350LLA bam alignments ENCSR429QPP ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOXM1-human ENCAB732JFX DNA False 2017-01-27 ENCODE 2 100 ENCFF749GVI, ENCFF807MUK, ENCFF888ZYM 3335272985 ENCODE Processing Pipeline c7fc5797a90b189078834f96f7da93a4 https://www.encodeproject.org/files/ENCFF350LLA/@@download/ENCFF350LLA.bam hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF443CLI bigWig signal p-value ENCSR429QPP ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOXM1-human ENCAB732JFX DNA False 2017-01-27 ENCODE 1 ENCFF581ZJL, ENCFF866PHS 872947503 ENCODE Processing Pipeline dde90e9890a7747f5b1674461ed2bb4c https://www.encodeproject.org/files/ENCFF443CLI/@@download/ENCFF443CLI.bigWig hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF068SKD bigWig signal p-value ENCSR429QPP ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOXM1-human ENCAB732JFX DNA False 2017-01-27 ENCODE 2 ENCFF051LWI, ENCFF350LLA 1034794886 ENCODE Processing Pipeline 1e91340274daabdcf33c9bb9b4ea2dc4 https://www.encodeproject.org/files/ENCFF068SKD/@@download/ENCFF068SKD.bigWig hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF070JCK bigWig signal p-value ENCSR429QPP ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOXM1-human ENCAB732JFX DNA False 2017-01-27 ENCODE 1, 2 ENCFF051LWI, ENCFF350LLA, ENCFF581ZJL, ENCFF866PHS 1824899724 ENCODE Processing Pipeline 981c55fa6a91248acf41c288e7a58d98 https://www.encodeproject.org/files/ENCFF070JCK/@@download/ENCFF070JCK.bigWig hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF154LRU bigWig fold change over control ENCSR429QPP ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOXM1-human ENCAB732JFX DNA False 2017-01-27 ENCODE 1 ENCFF581ZJL, ENCFF866PHS 902416433 ENCODE Processing Pipeline 3f8a05a898f7a741809be71f42029088 https://www.encodeproject.org/files/ENCFF154LRU/@@download/ENCFF154LRU.bigWig hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF868KZY bigWig fold change over control ENCSR429QPP ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOXM1-human ENCAB732JFX DNA False 2017-01-27 ENCODE 2 ENCFF051LWI, ENCFF350LLA 958997019 ENCODE Processing Pipeline c79f4886375491a64e71251d5d32c08d https://www.encodeproject.org/files/ENCFF868KZY/@@download/ENCFF868KZY.bigWig hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF581TEU bigWig fold change over control ENCSR429QPP ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOXM1-human ENCAB732JFX DNA False 2017-01-27 ENCODE 1, 2 ENCFF051LWI, ENCFF350LLA, ENCFF581ZJL, ENCFF866PHS 1831149260 ENCODE Processing Pipeline 96a16be6a3cc061be0b3b39d65d187f9 https://www.encodeproject.org/files/ENCFF581TEU/@@download/ENCFF581TEU.bigWig hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF804EPQ bed narrowPeak peaks ENCSR429QPP ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOXM1-human ENCAB732JFX DNA False 2017-01-27 ENCODE 1, 2 ENCFF051LWI, ENCFF350LLA, ENCFF581ZJL, ENCFF866PHS 7186272 ENCODE Processing Pipeline cd57a51b80df2d7d183804360fba3f62 https://www.encodeproject.org/files/ENCFF804EPQ/@@download/ENCFF804EPQ.bed.gz hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF805KEB bed narrowPeak peaks ENCSR429QPP ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOXM1-human ENCAB732JFX DNA False 2017-01-27 ENCODE 2 ENCFF051LWI, ENCFF350LLA 6635169 ENCODE Processing Pipeline 45e1425a9acf2feddb601a4f89b81aae https://www.encodeproject.org/files/ENCFF805KEB/@@download/ENCFF805KEB.bed.gz hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF847FHY bed narrowPeak peaks ENCSR429QPP ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOXM1-human ENCAB732JFX DNA False 2017-01-27 ENCODE 1 ENCFF581ZJL, ENCFF866PHS 6320438 ENCODE Processing Pipeline 2aa8318060a352cb9fc918b08c5f97b7 https://www.encodeproject.org/files/ENCFF847FHY/@@download/ENCFF847FHY.bed.gz hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF084QFT bigBed narrowPeak peaks ENCSR429QPP ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOXM1-human ENCAB732JFX DNA False 2017-01-27 ENCODE 2 ENCFF805KEB 13320086 ENCODE Processing Pipeline 0d05d7b1692fc722d94f9bafe4093b4e https://www.encodeproject.org/files/ENCFF084QFT/@@download/ENCFF084QFT.bigBed hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF162IAF bigBed narrowPeak peaks ENCSR429QPP ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOXM1-human ENCAB732JFX DNA False 2017-01-27 ENCODE 1, 2 ENCFF804EPQ 13172467 ENCODE Processing Pipeline e4a132f10c88273804976bb879274471 https://www.encodeproject.org/files/ENCFF162IAF/@@download/ENCFF162IAF.bigBed hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF894FQV bigBed narrowPeak peaks ENCSR429QPP ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOXM1-human ENCAB732JFX DNA False 2017-01-27 ENCODE 1 ENCFF847FHY 13264203 ENCODE Processing Pipeline d0d39d41c18d571f52f266b9b17f28fe https://www.encodeproject.org/files/ENCFF894FQV/@@download/ENCFF894FQV.bigBed hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF066BXQ bam unfiltered alignments ENCSR429QPP ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOXM1-human ENCAB732JFX DNA False 2017-01-27 ENCODE 2 100 ENCFF643CGH, ENCFF749GVI, ENCFF888ZYM 5258298681 ENCODE Processing Pipeline b31e8aacb805e7f589c9e82887915373 https://www.encodeproject.org/files/ENCFF066BXQ/@@download/ENCFF066BXQ.bam GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF463IID bam unfiltered alignments ENCSR429QPP ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOXM1-human ENCAB732JFX DNA False 2017-01-27 ENCODE 1 100 ENCFF007LTF, ENCFF167VUS, ENCFF643CGH 3574592162 ENCODE Processing Pipeline 80740624396a8c9f48a82f19e318b97b https://www.encodeproject.org/files/ENCFF463IID/@@download/ENCFF463IID.bam GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF182YDN bam alignments ENCSR429QPP ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOXM1-human ENCAB732JFX DNA False 2017-01-27 ENCODE 1 100 ENCFF007LTF, ENCFF167VUS, ENCFF643CGH 2596971810 ENCODE Processing Pipeline 9e3bd36662d9581688b4594fa27080e8 https://www.encodeproject.org/files/ENCFF182YDN/@@download/ENCFF182YDN.bam GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF855NIZ bam alignments ENCSR429QPP ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOXM1-human ENCAB732JFX DNA False 2017-01-27 ENCODE 2 100 ENCFF643CGH, ENCFF749GVI, ENCFF888ZYM 3336748137 ENCODE Processing Pipeline 54497eff2b2f3f2561a7eaa4001371ac https://www.encodeproject.org/files/ENCFF855NIZ/@@download/ENCFF855NIZ.bam GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF298MJQ bigWig signal p-value ENCSR429QPP ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOXM1-human ENCAB732JFX DNA False 2017-01-27 ENCODE 1 ENCFF182YDN, ENCFF910IKB 943287050 ENCODE Processing Pipeline 158cc8461477bfe08e3ace5217834167 https://www.encodeproject.org/files/ENCFF298MJQ/@@download/ENCFF298MJQ.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF758HSC bigWig signal p-value ENCSR429QPP ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOXM1-human ENCAB732JFX DNA False 2017-01-27 ENCODE 2 ENCFF227IZS, ENCFF855NIZ 1080190040 ENCODE Processing Pipeline 17fbb6649a0eb9fabafa66e00016c6d0 https://www.encodeproject.org/files/ENCFF758HSC/@@download/ENCFF758HSC.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF055CSS bigWig signal p-value ENCSR429QPP ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOXM1-human ENCAB732JFX DNA False 2017-01-27 ENCODE 1, 2 ENCFF182YDN, ENCFF227IZS, ENCFF855NIZ, ENCFF910IKB 1820462835 ENCODE Processing Pipeline 64270c8254ae266fe976ec2abfa1d255 https://www.encodeproject.org/files/ENCFF055CSS/@@download/ENCFF055CSS.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF205BDH bigWig fold change over control ENCSR429QPP ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOXM1-human ENCAB732JFX DNA False 2017-01-27 ENCODE 1 ENCFF182YDN, ENCFF910IKB 908406515 ENCODE Processing Pipeline 1e6db7fd75a37c3c943d8d7c42d63202 https://www.encodeproject.org/files/ENCFF205BDH/@@download/ENCFF205BDH.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF608AMY bigWig fold change over control ENCSR429QPP ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOXM1-human ENCAB732JFX DNA False 2017-01-27 ENCODE 2 ENCFF227IZS, ENCFF855NIZ 965608527 ENCODE Processing Pipeline 8993aa0610ed302e5d470b376fbbf4a7 https://www.encodeproject.org/files/ENCFF608AMY/@@download/ENCFF608AMY.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF742LMU bigWig fold change over control ENCSR429QPP ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOXM1-human ENCAB732JFX DNA False 2017-01-27 ENCODE 1, 2 ENCFF182YDN, ENCFF227IZS, ENCFF855NIZ, ENCFF910IKB 1831443391 ENCODE Processing Pipeline 9ac76bbcdc697317c2acbd4e36234f26 https://www.encodeproject.org/files/ENCFF742LMU/@@download/ENCFF742LMU.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF778XYS bed narrowPeak peaks ENCSR429QPP ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOXM1-human ENCAB732JFX DNA False 2017-01-27 ENCODE 1 ENCFF182YDN, ENCFF910IKB 6218179 ENCODE Processing Pipeline 3da93f5c53738804b6f3c19fd34f13f9 https://www.encodeproject.org/files/ENCFF778XYS/@@download/ENCFF778XYS.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF163BVD bed narrowPeak peaks ENCSR429QPP ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOXM1-human ENCAB732JFX DNA False 2017-01-27 ENCODE 2 ENCFF227IZS, ENCFF855NIZ 6514222 ENCODE Processing Pipeline 326fb2e02f8f48898d67623e69d5cf6f https://www.encodeproject.org/files/ENCFF163BVD/@@download/ENCFF163BVD.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF153UAP bed narrowPeak peaks ENCSR429QPP ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOXM1-human ENCAB732JFX DNA False 2017-01-27 ENCODE 1, 2 ENCFF182YDN, ENCFF227IZS, ENCFF855NIZ, ENCFF910IKB 7099573 ENCODE Processing Pipeline c3516d69e6a0ace27b9170975ccf5a4b https://www.encodeproject.org/files/ENCFF153UAP/@@download/ENCFF153UAP.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF234TDX bigBed narrowPeak peaks ENCSR429QPP ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOXM1-human ENCAB732JFX DNA False 2017-01-27 ENCODE 1 ENCFF778XYS 13255032 ENCODE Processing Pipeline 595d8384e7e5eae78183ff4d2748ad15 https://www.encodeproject.org/files/ENCFF234TDX/@@download/ENCFF234TDX.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF054XXF bigBed narrowPeak peaks ENCSR429QPP ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOXM1-human ENCAB732JFX DNA False 2017-01-27 ENCODE 2 ENCFF163BVD 13319065 ENCODE Processing Pipeline d11e4fa79f953e569efe69b4e0b0cacc https://www.encodeproject.org/files/ENCFF054XXF/@@download/ENCFF054XXF.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF458SFA bigBed narrowPeak peaks ENCSR429QPP ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOXM1-human ENCAB732JFX DNA False 2017-01-27 ENCODE 1, 2 ENCFF153UAP 13121136 ENCODE Processing Pipeline 9c42c81bb2b96ae5e749584d845dab25 https://www.encodeproject.org/files/ENCFF458SFA/@@download/ENCFF458SFA.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF805OCR bed narrowPeak conservative idr thresholded peaks ENCSR429QPP ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOXM1-human ENCAB732JFX DNA False 2017-01-27 ENCODE 1, 2 ENCFF153UAP, ENCFF163BVD, ENCFF419RSJ, ENCFF778XYS 234353 ENCODE Processing Pipeline 74c977c79ee030ee6a832247710f63a5 https://www.encodeproject.org/files/ENCFF805OCR/@@download/ENCFF805OCR.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF577NTN bigBed narrowPeak conservative idr thresholded peaks ENCSR429QPP ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOXM1-human ENCAB732JFX DNA False 2017-01-27 ENCODE 1, 2 ENCFF805OCR 473144 ENCODE Processing Pipeline 67fc23152ec81ae739ef1455ca4c1f19 https://www.encodeproject.org/files/ENCFF577NTN/@@download/ENCFF577NTN.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF778PWE bed narrowPeak optimal idr thresholded peaks ENCSR429QPP ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOXM1-human ENCAB732JFX DNA False 2017-01-27 ENCODE 1, 2 ENCFF153UAP, ENCFF163BVD, ENCFF419RSJ, ENCFF778XYS 314329 ENCODE Processing Pipeline 4226c87a701f4ad111bfd234293ec22e https://www.encodeproject.org/files/ENCFF778PWE/@@download/ENCFF778PWE.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF286NQL bigBed narrowPeak optimal idr thresholded peaks ENCSR429QPP ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOXM1-human ENCAB732JFX DNA False 2017-01-27 ENCODE 1, 2 ENCFF778PWE 582032 ENCODE Processing Pipeline 0e77282e5878b9b8e24f72e54e59f025 https://www.encodeproject.org/files/ENCFF286NQL/@@download/ENCFF286NQL.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF868YHU bigBed narrowPeak optimal idr thresholded peaks ENCSR429QPP ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOXM1-human ENCAB732JFX DNA False 2017-01-27 ENCODE 1, 2 ENCFF699ZII 540068 ENCODE Processing Pipeline d9038c8ed8ce1322c467b5db18530f46 https://www.encodeproject.org/files/ENCFF868YHU/@@download/ENCFF868YHU.bigBed hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF869BQV bed narrowPeak conservative idr thresholded peaks ENCSR429QPP ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOXM1-human ENCAB732JFX DNA False 2017-01-27 ENCODE 1, 2 ENCFF001TDO, ENCFF804EPQ, ENCFF805KEB, ENCFF847FHY 211228 ENCODE Processing Pipeline a5794914da85bfbe1ea16625734ec816 https://www.encodeproject.org/files/ENCFF869BQV/@@download/ENCFF869BQV.bed.gz hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF681FCM bigBed narrowPeak conservative idr thresholded peaks ENCSR429QPP ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOXM1-human ENCAB732JFX DNA False 2017-01-27 ENCODE 1, 2 ENCFF869BQV 441085 ENCODE Processing Pipeline 9b91be97e44c5243fead768a6d386d9d https://www.encodeproject.org/files/ENCFF681FCM/@@download/ENCFF681FCM.bigBed hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF699ZII bed narrowPeak optimal idr thresholded peaks ENCSR429QPP ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOXM1-human ENCAB732JFX DNA False 2017-01-27 ENCODE 1, 2 ENCFF001TDO, ENCFF804EPQ, ENCFF805KEB, ENCFF847FHY 287070 ENCODE Processing Pipeline 4775f57db3e59a973c0c857c17c0de9b https://www.encodeproject.org/files/ENCFF699ZII/@@download/ENCFF699ZII.bed.gz hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF448ELH bam unfiltered alignments ENCSR370NFS ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF280A-human ENCAB171RPO DNA False 2018-01-26 ENCODE 2 100 ENCFF432GOG, ENCFF580CTA, ENCFF807MUK 3344615066 ENCODE Processing Pipeline a3d37852aee6fa2250ea3e53f3d2b872 https://www.encodeproject.org/files/ENCFF448ELH/@@download/ENCFF448ELH.bam hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF731MRC bam unfiltered alignments ENCSR370NFS ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF280A-human ENCAB171RPO DNA False 2018-01-26 ENCODE 1 100 ENCFF248HYP, ENCFF807MUK, ENCFF824XIN 3250998548 ENCODE Processing Pipeline 9a5382532f3dffb32915a8a90456dfb8 https://www.encodeproject.org/files/ENCFF731MRC/@@download/ENCFF731MRC.bam hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF580CTA fastq reads ENCSR370NFS ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF280A-human ENCAB171RPO DNA False 2018-01-26 ENCODE 2 1 100 paired-ended 1 ENCFF432GOG 1460457598 Michael Snyder, Stanford 164de139c902ee0ea87536879833e204 https://www.encodeproject.org/files/ENCFF580CTA/@@download/ENCFF580CTA.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFD/ released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF432GOG fastq reads ENCSR370NFS ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF280A-human ENCAB171RPO DNA False 2018-01-26 ENCODE 2 1 100 paired-ended 2 ENCFF580CTA 1543159989 Michael Snyder, Stanford fb303f9005b05defbf22f9e7ab6d773b https://www.encodeproject.org/files/ENCFF432GOG/@@download/ENCFF432GOG.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFA/ released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF824XIN fastq reads ENCSR370NFS ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF280A-human ENCAB171RPO DNA False 2018-01-26 ENCODE 1 1 100 paired-ended 1 ENCFF248HYP 1426594752 Michael Snyder, Stanford 30e026a49f7e3125cddbb66b9f4aa503 https://www.encodeproject.org/files/ENCFF824XIN/@@download/ENCFF824XIN.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFF/ released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF248HYP fastq reads ENCSR370NFS ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF280A-human ENCAB171RPO DNA False 2018-01-26 ENCODE 1 1 100 paired-ended 2 ENCFF824XIN 1510484392 Michael Snyder, Stanford b84c0f8ba4c40275ea652f8083807067 https://www.encodeproject.org/files/ENCFF248HYP/@@download/ENCFF248HYP.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFH/ released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF078WRQ bam alignments ENCSR370NFS ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF280A-human ENCAB171RPO DNA False 2018-01-26 ENCODE 1 100 ENCFF248HYP, ENCFF807MUK, ENCFF824XIN 2455063764 ENCODE Processing Pipeline 706d81dde39328f151d7f6cdad70c021 https://www.encodeproject.org/files/ENCFF078WRQ/@@download/ENCFF078WRQ.bam hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF669HLL bam alignments ENCSR370NFS ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF280A-human ENCAB171RPO DNA False 2018-01-26 ENCODE 2 100 ENCFF432GOG, ENCFF580CTA, ENCFF807MUK 2520532581 ENCODE Processing Pipeline 7b1aea01dcfed52a4f32f6c7df8693de https://www.encodeproject.org/files/ENCFF669HLL/@@download/ENCFF669HLL.bam hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF488BMW bigWig signal p-value ENCSR370NFS ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF280A-human ENCAB171RPO DNA False 2018-01-26 ENCODE 1 ENCFF078WRQ, ENCFF581ZJL 871152404 ENCODE Processing Pipeline 5fdd33686d96d7ca0cb132e19568d34b https://www.encodeproject.org/files/ENCFF488BMW/@@download/ENCFF488BMW.bigWig hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF710EKA bigWig signal p-value ENCSR370NFS ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF280A-human ENCAB171RPO DNA False 2018-01-26 ENCODE 2 ENCFF051LWI, ENCFF669HLL 842684754 ENCODE Processing Pipeline d60911da10627ea31f17b850f7a150b1 https://www.encodeproject.org/files/ENCFF710EKA/@@download/ENCFF710EKA.bigWig hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF672PUU bigWig signal p-value ENCSR370NFS ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF280A-human ENCAB171RPO DNA False 2018-01-26 ENCODE 1, 2 ENCFF051LWI, ENCFF078WRQ, ENCFF581ZJL, ENCFF669HLL 1789616680 ENCODE Processing Pipeline 70a8ae23ffa83f492206efa0826ca7f2 https://www.encodeproject.org/files/ENCFF672PUU/@@download/ENCFF672PUU.bigWig hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF835NDN bigWig fold change over control ENCSR370NFS ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF280A-human ENCAB171RPO DNA False 2018-01-26 ENCODE 1 ENCFF078WRQ, ENCFF581ZJL 900211732 ENCODE Processing Pipeline 7b31498f74d0401555eda5e41d623a61 https://www.encodeproject.org/files/ENCFF835NDN/@@download/ENCFF835NDN.bigWig hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF927BKD bigWig fold change over control ENCSR370NFS ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF280A-human ENCAB171RPO DNA False 2018-01-26 ENCODE 2 ENCFF051LWI, ENCFF669HLL 882998147 ENCODE Processing Pipeline c7644f617f99d9182ad5a431f89ed64b https://www.encodeproject.org/files/ENCFF927BKD/@@download/ENCFF927BKD.bigWig hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF951RIW bigWig fold change over control ENCSR370NFS ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF280A-human ENCAB171RPO DNA False 2018-01-26 ENCODE 1, 2 ENCFF051LWI, ENCFF078WRQ, ENCFF581ZJL, ENCFF669HLL 1774497491 ENCODE Processing Pipeline 63b2c04ac5f4dc8ffeae0e28499cbc8b https://www.encodeproject.org/files/ENCFF951RIW/@@download/ENCFF951RIW.bigWig hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF586VID bigBed narrowPeak peaks ENCSR370NFS ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF280A-human ENCAB171RPO DNA False 2018-01-26 ENCODE 1 ENCFF434UXV 11149048 ENCODE Processing Pipeline f9483e8eeccbf4325a61951e23e70e37 https://www.encodeproject.org/files/ENCFF586VID/@@download/ENCFF586VID.bigBed hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF310DOZ bed narrowPeak peaks ENCSR370NFS ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF280A-human ENCAB171RPO DNA False 2018-01-26 ENCODE 2 ENCFF051LWI, ENCFF669HLL 5924348 ENCODE Processing Pipeline 14b3f3d8ab5a0509cdc620d42c6ac978 https://www.encodeproject.org/files/ENCFF310DOZ/@@download/ENCFF310DOZ.bed.gz hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF434UXV bed narrowPeak peaks ENCSR370NFS ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF280A-human ENCAB171RPO DNA False 2018-01-26 ENCODE 1 ENCFF078WRQ, ENCFF581ZJL 6121491 ENCODE Processing Pipeline 9e7a73b61fd9f2cad156317b4ebb9bea https://www.encodeproject.org/files/ENCFF434UXV/@@download/ENCFF434UXV.bed.gz hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF082MXA bed narrowPeak peaks ENCSR370NFS ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF280A-human ENCAB171RPO DNA False 2018-01-26 ENCODE 1, 2 ENCFF051LWI, ENCFF078WRQ, ENCFF581ZJL, ENCFF669HLL 6998910 ENCODE Processing Pipeline 3a238ed715655731324f9400fe59a7e0 https://www.encodeproject.org/files/ENCFF082MXA/@@download/ENCFF082MXA.bed.gz hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF917SDW bigBed narrowPeak peaks ENCSR370NFS ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF280A-human ENCAB171RPO DNA False 2018-01-26 ENCODE 2 ENCFF310DOZ 11108218 ENCODE Processing Pipeline 6206091c5d10894d716bc612891e0de9 https://www.encodeproject.org/files/ENCFF917SDW/@@download/ENCFF917SDW.bigBed hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF331PSM bigBed narrowPeak peaks ENCSR370NFS ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF280A-human ENCAB171RPO DNA False 2018-01-26 ENCODE 1, 2 ENCFF082MXA 11072040 ENCODE Processing Pipeline d01e068cebae665eaafe5580e4eb41a0 https://www.encodeproject.org/files/ENCFF331PSM/@@download/ENCFF331PSM.bigBed hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF144YOM bam unfiltered alignments ENCSR370NFS ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF280A-human ENCAB171RPO DNA False 2018-01-26 ENCODE 1 100 ENCFF248HYP, ENCFF643CGH, ENCFF824XIN 3251742867 ENCODE Processing Pipeline dd9c0aeb667cc94b2a3d9a38d4fa1da8 https://www.encodeproject.org/files/ENCFF144YOM/@@download/ENCFF144YOM.bam GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF473TNA bam unfiltered alignments ENCSR370NFS ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF280A-human ENCAB171RPO DNA False 2018-01-26 ENCODE 2 100 ENCFF432GOG, ENCFF580CTA, ENCFF643CGH 3345810940 ENCODE Processing Pipeline e79210df51c3ed6ad0eedf5caf99973d https://www.encodeproject.org/files/ENCFF473TNA/@@download/ENCFF473TNA.bam GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF513UKV bam alignments ENCSR370NFS ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF280A-human ENCAB171RPO DNA False 2018-01-26 ENCODE 1 100 ENCFF248HYP, ENCFF643CGH, ENCFF824XIN 2456554174 ENCODE Processing Pipeline 7ab7426fb9bc30485ca7189470720f53 https://www.encodeproject.org/files/ENCFF513UKV/@@download/ENCFF513UKV.bam GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF054NSG bam alignments ENCSR370NFS ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF280A-human ENCAB171RPO DNA False 2018-01-26 ENCODE 2 100 ENCFF432GOG, ENCFF580CTA, ENCFF643CGH 2522154208 ENCODE Processing Pipeline e07e0e417c9d72d6cd7c2003393757d9 https://www.encodeproject.org/files/ENCFF054NSG/@@download/ENCFF054NSG.bam GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF435PBF bigWig signal p-value ENCSR370NFS ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF280A-human ENCAB171RPO DNA False 2018-01-26 ENCODE 1 ENCFF513UKV 1001529397 ENCODE Processing Pipeline bd6f17869779b3a7ed72821abcdbff90 https://www.encodeproject.org/files/ENCFF435PBF/@@download/ENCFF435PBF.bigWig GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF419DUN bigWig signal p-value ENCSR370NFS ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF280A-human ENCAB171RPO DNA False 2018-01-26 ENCODE 2 ENCFF054NSG 990711513 ENCODE Processing Pipeline 5d67f0d18d7b414d1c3ec4c4fd2eca35 https://www.encodeproject.org/files/ENCFF419DUN/@@download/ENCFF419DUN.bigWig GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF397EMU bigWig signal p-value ENCSR370NFS ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF280A-human ENCAB171RPO DNA False 2018-01-26 ENCODE 1, 2 ENCFF054NSG, ENCFF513UKV 1642955914 ENCODE Processing Pipeline 92b0692030852230a091d30d1e4344f8 https://www.encodeproject.org/files/ENCFF397EMU/@@download/ENCFF397EMU.bigWig GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF595WDT bigWig fold change over control ENCSR370NFS ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF280A-human ENCAB171RPO DNA False 2018-01-26 ENCODE 1 ENCFF513UKV 898405005 ENCODE Processing Pipeline 074cbcea7d989fad5e31b42b713b94b1 https://www.encodeproject.org/files/ENCFF595WDT/@@download/ENCFF595WDT.bigWig GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF429RPN bigWig fold change over control ENCSR370NFS ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF280A-human ENCAB171RPO DNA False 2018-01-26 ENCODE 2 ENCFF054NSG 891725202 ENCODE Processing Pipeline ae5701332d07f27e2b561b585c486670 https://www.encodeproject.org/files/ENCFF429RPN/@@download/ENCFF429RPN.bigWig GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF616UEL bigWig fold change over control ENCSR370NFS ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF280A-human ENCAB171RPO DNA False 2018-01-26 ENCODE 1, 2 ENCFF054NSG, ENCFF513UKV 1796603981 ENCODE Processing Pipeline e0e3c6ac43ea1233d1cd2d7c54a28ccc https://www.encodeproject.org/files/ENCFF616UEL/@@download/ENCFF616UEL.bigWig GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF826NFB bed narrowPeak peaks ENCSR370NFS ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF280A-human ENCAB171RPO DNA False 2018-01-26 ENCODE 1 ENCFF513UKV 5993620 ENCODE Processing Pipeline 2e3b0fde9f7559a8c83c68db909f136b https://www.encodeproject.org/files/ENCFF826NFB/@@download/ENCFF826NFB.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF557EJD bed narrowPeak peaks ENCSR370NFS ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF280A-human ENCAB171RPO DNA False 2018-01-26 ENCODE 2 ENCFF054NSG 5738244 ENCODE Processing Pipeline 1a2224fc10dbc53ebe2d3641d8109c35 https://www.encodeproject.org/files/ENCFF557EJD/@@download/ENCFF557EJD.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF400VAN bed narrowPeak peaks ENCSR370NFS ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF280A-human ENCAB171RPO DNA False 2018-01-26 ENCODE 1, 2 ENCFF054NSG, ENCFF513UKV 6931376 ENCODE Processing Pipeline b451788d4262acf9c98be54d7922570f https://www.encodeproject.org/files/ENCFF400VAN/@@download/ENCFF400VAN.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF086GND bigBed narrowPeak peaks ENCSR370NFS ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF280A-human ENCAB171RPO DNA False 2018-01-26 ENCODE 1 ENCFF826NFB 11150017 ENCODE Processing Pipeline 71ec21037becf0fe1d6e7180a0545d8f https://www.encodeproject.org/files/ENCFF086GND/@@download/ENCFF086GND.bigBed GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF139YRD bigBed narrowPeak peaks ENCSR370NFS ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF280A-human ENCAB171RPO DNA False 2018-01-26 ENCODE 2 ENCFF557EJD 11101728 ENCODE Processing Pipeline a64d0f810eae1c7d503aae970d78e0a4 https://www.encodeproject.org/files/ENCFF139YRD/@@download/ENCFF139YRD.bigBed GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF655SRT bigBed narrowPeak peaks ENCSR370NFS ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF280A-human ENCAB171RPO DNA False 2018-01-26 ENCODE 1, 2 ENCFF400VAN 11084593 ENCODE Processing Pipeline 2df7ac7481c6e0a6f20fe47116af8018 https://www.encodeproject.org/files/ENCFF655SRT/@@download/ENCFF655SRT.bigBed GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF705FAV bed narrowPeak conservative idr thresholded peaks ENCSR370NFS ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF280A-human ENCAB171RPO DNA False 2018-01-26 ENCODE 1, 2 ENCFF400VAN, ENCFF419RSJ, ENCFF557EJD, ENCFF826NFB 86901 ENCODE Processing Pipeline 75333e314f040465d6c14ac3dee225d9 https://www.encodeproject.org/files/ENCFF705FAV/@@download/ENCFF705FAV.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF527UOO bigBed narrowPeak conservative idr thresholded peaks ENCSR370NFS ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF280A-human ENCAB171RPO DNA False 2018-01-26 ENCODE 1, 2 ENCFF705FAV 228764 ENCODE Processing Pipeline d1c2224a99317950808efdeb8e06b0d4 https://www.encodeproject.org/files/ENCFF527UOO/@@download/ENCFF527UOO.bigBed GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF074WRG bed narrowPeak optimal idr thresholded peaks ENCSR370NFS ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF280A-human ENCAB171RPO DNA False 2018-01-26 ENCODE 1, 2 ENCFF400VAN, ENCFF419RSJ, ENCFF557EJD, ENCFF826NFB 121805 ENCODE Processing Pipeline 2a6c5d6008862ed4d106f8cfca59e679 https://www.encodeproject.org/files/ENCFF074WRG/@@download/ENCFF074WRG.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF857IEQ bigBed narrowPeak optimal idr thresholded peaks ENCSR370NFS ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF280A-human ENCAB171RPO DNA False 2018-01-26 ENCODE 1, 2 ENCFF074WRG 285319 ENCODE Processing Pipeline 5de04f744c339568def16a4b78e8e75a https://www.encodeproject.org/files/ENCFF857IEQ/@@download/ENCFF857IEQ.bigBed GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF346SGM bed narrowPeak conservative idr thresholded peaks ENCSR370NFS ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF280A-human ENCAB171RPO DNA False 2018-01-26 ENCODE 1, 2 ENCFF001TDO, ENCFF082MXA, ENCFF310DOZ, ENCFF434UXV 70996 ENCODE Processing Pipeline 814045f72b9d5e69e9d92d368709fd9f https://www.encodeproject.org/files/ENCFF346SGM/@@download/ENCFF346SGM.bed.gz hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF386WKY bed narrowPeak optimal idr thresholded peaks ENCSR370NFS ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF280A-human ENCAB171RPO DNA False 2018-01-26 ENCODE 1, 2 ENCFF001TDO, ENCFF082MXA, ENCFF310DOZ, ENCFF434UXV 99822 ENCODE Processing Pipeline 0bd29eef25235deb45fd77ec5aaa0ce4 https://www.encodeproject.org/files/ENCFF386WKY/@@download/ENCFF386WKY.bed.gz hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF086KJS bigBed narrowPeak optimal idr thresholded peaks ENCSR370NFS ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF280A-human ENCAB171RPO DNA False 2018-01-26 ENCODE 1, 2 ENCFF386WKY 205397 ENCODE Processing Pipeline c4f4cf9f888efab782601739707ed6b6 https://www.encodeproject.org/files/ENCFF086KJS/@@download/ENCFF086KJS.bigBed hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF050ODE bigBed narrowPeak conservative idr thresholded peaks ENCSR370NFS ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF280A-human ENCAB171RPO DNA False 2018-01-26 ENCODE 1, 2 ENCFF346SGM 168231 ENCODE Processing Pipeline 402b27bc53269855ad696e489c0823f0 https://www.encodeproject.org/files/ENCFF050ODE/@@download/ENCFF050ODE.bigBed hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF405KNH bam unfiltered alignments ENCSR325RLL ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2B-human ENCAB069SSA DNA False 2018-01-26 ENCODE 2 100 ENCFF670UOV, ENCFF807MUK, ENCFF841OOC 4052596893 ENCODE Processing Pipeline 133e2a69b22b389e086bcbba15f6f342 https://www.encodeproject.org/files/ENCFF405KNH/@@download/ENCFF405KNH.bam hg19 released low read depth experiment not submitted to GEO partially characterized antibody ENCFF454PCU bam unfiltered alignments ENCSR325RLL ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2B-human ENCAB069SSA DNA False 2018-01-26 ENCODE 1 100 ENCFF058FFZ, ENCFF674GQJ, ENCFF807MUK 4244195615 ENCODE Processing Pipeline b9a1881ccfb11f905bab70098189e021 https://www.encodeproject.org/files/ENCFF454PCU/@@download/ENCFF454PCU.bam hg19 released low read depth experiment not submitted to GEO partially characterized antibody ENCFF670UOV fastq reads ENCSR325RLL ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2B-human ENCAB069SSA DNA False 2018-01-26 ENCODE 2 1 100 paired-ended 2 ENCFF841OOC 1879994175 Michael Snyder, Stanford dec7b551a8c3cdcfc86917b69719d17c https://www.encodeproject.org/files/ENCFF670UOV/@@download/ENCFF670UOV.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFA/ released low read depth experiment not submitted to GEO partially characterized antibody ENCFF058FFZ fastq reads ENCSR325RLL ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2B-human ENCAB069SSA DNA False 2018-01-26 ENCODE 1 1 100 paired-ended 1 ENCFF674GQJ 1936004523 Michael Snyder, Stanford fbf194655f43439cfe93251c1cc0cca3 https://www.encodeproject.org/files/ENCFF058FFZ/@@download/ENCFF058FFZ.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFF/ released low read depth experiment not submitted to GEO partially characterized antibody ENCFF674GQJ fastq reads ENCSR325RLL ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2B-human ENCAB069SSA DNA False 2018-01-26 ENCODE 1 1 100 paired-ended 2 ENCFF058FFZ 1996738333 Michael Snyder, Stanford d45bcccd21c4aae33ea9c76c009d2d81 https://www.encodeproject.org/files/ENCFF674GQJ/@@download/ENCFF674GQJ.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFH/ released low read depth experiment not submitted to GEO partially characterized antibody ENCFF841OOC fastq reads ENCSR325RLL ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2B-human ENCAB069SSA DNA False 2018-01-26 ENCODE 2 1 100 paired-ended 1 ENCFF670UOV 1823435356 Michael Snyder, Stanford fe7f8b9f5817ad7341598947b262e769 https://www.encodeproject.org/files/ENCFF841OOC/@@download/ENCFF841OOC.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFD/ released low read depth experiment not submitted to GEO partially characterized antibody ENCFF446LZB bam alignments ENCSR325RLL ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2B-human ENCAB069SSA DNA False 2018-01-26 ENCODE 2 100 ENCFF670UOV, ENCFF807MUK, ENCFF841OOC 3447122804 ENCODE Processing Pipeline c7bcfb102866a0051954179a209aa3e8 https://www.encodeproject.org/files/ENCFF446LZB/@@download/ENCFF446LZB.bam hg19 released low read depth experiment not submitted to GEO partially characterized antibody ENCFF264TYT bam alignments ENCSR325RLL ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2B-human ENCAB069SSA DNA False 2018-01-26 ENCODE 1 100 ENCFF058FFZ, ENCFF674GQJ, ENCFF807MUK 3559327177 ENCODE Processing Pipeline 38dc8ea35b12837bc2a7237614cfb64d https://www.encodeproject.org/files/ENCFF264TYT/@@download/ENCFF264TYT.bam hg19 released low read depth experiment not submitted to GEO partially characterized antibody ENCFF841ZQJ bigWig signal p-value ENCSR325RLL ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2B-human ENCAB069SSA DNA False 2018-01-26 ENCODE 1 ENCFF264TYT, ENCFF581ZJL 1049805385 ENCODE Processing Pipeline 5b14c4b029892f9457b99b59351f81e2 https://www.encodeproject.org/files/ENCFF841ZQJ/@@download/ENCFF841ZQJ.bigWig hg19 released low read depth experiment not submitted to GEO partially characterized antibody ENCFF618BDB bigWig signal p-value ENCSR325RLL ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2B-human ENCAB069SSA DNA False 2018-01-26 ENCODE 2 ENCFF051LWI, ENCFF446LZB 989099454 ENCODE Processing Pipeline c3181bd1978247c359cbc43a85fdc8fa https://www.encodeproject.org/files/ENCFF618BDB/@@download/ENCFF618BDB.bigWig hg19 released low read depth experiment not submitted to GEO partially characterized antibody ENCFF610TLR bigWig signal p-value ENCSR325RLL ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2B-human ENCAB069SSA DNA False 2018-01-26 ENCODE 1, 2 ENCFF051LWI, ENCFF264TYT, ENCFF446LZB, ENCFF581ZJL 1870982104 ENCODE Processing Pipeline 3772c0e11186aea0f73dbfbe106ee4ee https://www.encodeproject.org/files/ENCFF610TLR/@@download/ENCFF610TLR.bigWig hg19 released low read depth experiment not submitted to GEO partially characterized antibody ENCFF452WGO bigWig fold change over control ENCSR325RLL ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2B-human ENCAB069SSA DNA False 2018-01-26 ENCODE 1 ENCFF264TYT, ENCFF581ZJL 1074390041 ENCODE Processing Pipeline 38114008da5ca49bd8c723b3cdc8e4c0 https://www.encodeproject.org/files/ENCFF452WGO/@@download/ENCFF452WGO.bigWig hg19 released low read depth experiment not submitted to GEO partially characterized antibody ENCFF545XLF bigWig fold change over control ENCSR325RLL ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2B-human ENCAB069SSA DNA False 2018-01-26 ENCODE 2 ENCFF051LWI, ENCFF446LZB 982024719 ENCODE Processing Pipeline d58269f9e3d68da9f38e6ef4c93266a5 https://www.encodeproject.org/files/ENCFF545XLF/@@download/ENCFF545XLF.bigWig hg19 released low read depth experiment not submitted to GEO partially characterized antibody ENCFF685ZXF bigWig fold change over control ENCSR325RLL ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2B-human ENCAB069SSA DNA False 2018-01-26 ENCODE 1, 2 ENCFF051LWI, ENCFF264TYT, ENCFF446LZB, ENCFF581ZJL 1934992895 ENCODE Processing Pipeline 2376675fa2746ac6c2887fc9882afdcf https://www.encodeproject.org/files/ENCFF685ZXF/@@download/ENCFF685ZXF.bigWig hg19 released low read depth experiment not submitted to GEO partially characterized antibody ENCFF729LTY bed narrowPeak peaks ENCSR325RLL ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2B-human ENCAB069SSA DNA False 2018-01-26 ENCODE 1 ENCFF264TYT, ENCFF581ZJL 7099146 ENCODE Processing Pipeline 628d0b785b60b2ee6aac7fdeaa4cb08a https://www.encodeproject.org/files/ENCFF729LTY/@@download/ENCFF729LTY.bed.gz hg19 released low read depth experiment not submitted to GEO partially characterized antibody ENCFF230UQS bed narrowPeak peaks ENCSR325RLL ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2B-human ENCAB069SSA DNA False 2018-01-26 ENCODE 2 ENCFF051LWI, ENCFF446LZB 7020305 ENCODE Processing Pipeline 18561f1925c356adf0aafbf3d0f97ce9 https://www.encodeproject.org/files/ENCFF230UQS/@@download/ENCFF230UQS.bed.gz hg19 released low read depth experiment not submitted to GEO partially characterized antibody ENCFF255HKN bed narrowPeak peaks ENCSR325RLL ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2B-human ENCAB069SSA DNA False 2018-01-26 ENCODE 1, 2 ENCFF051LWI, ENCFF264TYT, ENCFF446LZB, ENCFF581ZJL 7173879 ENCODE Processing Pipeline aeb881b6ecc4466d1162b9536295e499 https://www.encodeproject.org/files/ENCFF255HKN/@@download/ENCFF255HKN.bed.gz hg19 released low read depth experiment not submitted to GEO partially characterized antibody ENCFF204WPK bigBed narrowPeak peaks ENCSR325RLL ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2B-human ENCAB069SSA DNA False 2018-01-26 ENCODE 2 ENCFF230UQS 12660387 ENCODE Processing Pipeline 973a5012ed7f9ed16969f410dae68989 https://www.encodeproject.org/files/ENCFF204WPK/@@download/ENCFF204WPK.bigBed hg19 released low read depth experiment not submitted to GEO partially characterized antibody ENCFF930RQX bigBed narrowPeak peaks ENCSR325RLL ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2B-human ENCAB069SSA DNA False 2018-01-26 ENCODE 1, 2 ENCFF255HKN 12245687 ENCODE Processing Pipeline a5412ddfa564a6bcbb0368c7d6a76799 https://www.encodeproject.org/files/ENCFF930RQX/@@download/ENCFF930RQX.bigBed hg19 released low read depth experiment not submitted to GEO partially characterized antibody ENCFF326BMX bigBed narrowPeak peaks ENCSR325RLL ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2B-human ENCAB069SSA DNA False 2018-01-26 ENCODE 1 ENCFF729LTY 12550550 ENCODE Processing Pipeline ddf46e1665d09cefd5cb1cd7e8fec3e1 https://www.encodeproject.org/files/ENCFF326BMX/@@download/ENCFF326BMX.bigBed hg19 released low read depth experiment not submitted to GEO partially characterized antibody ENCFF156DTP bam unfiltered alignments ENCSR325RLL ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2B-human ENCAB069SSA DNA False 2018-01-26 ENCODE 2 100 ENCFF643CGH, ENCFF670UOV, ENCFF841OOC 4055499752 ENCODE Processing Pipeline df0a05705cd0cc847f61bbebd1505ef3 https://www.encodeproject.org/files/ENCFF156DTP/@@download/ENCFF156DTP.bam GRCh38 released low read depth experiment not submitted to GEO partially characterized antibody ENCFF343TJV bam unfiltered alignments ENCSR325RLL ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2B-human ENCAB069SSA DNA False 2018-01-26 ENCODE 1 100 ENCFF058FFZ, ENCFF643CGH, ENCFF674GQJ 4246979821 ENCODE Processing Pipeline 86c9c9f06524c6c85d8753566b80a1cb https://www.encodeproject.org/files/ENCFF343TJV/@@download/ENCFF343TJV.bam GRCh38 released low read depth experiment not submitted to GEO partially characterized antibody ENCFF995XZH bam alignments ENCSR325RLL ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2B-human ENCAB069SSA DNA False 2018-01-26 ENCODE 2 100 ENCFF643CGH, ENCFF670UOV, ENCFF841OOC 3450086582 ENCODE Processing Pipeline f13fd3791ee5bc7302511dbb116b3fb7 https://www.encodeproject.org/files/ENCFF995XZH/@@download/ENCFF995XZH.bam GRCh38 released low read depth experiment not submitted to GEO partially characterized antibody ENCFF877RVZ bam alignments ENCSR325RLL ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2B-human ENCAB069SSA DNA False 2018-01-26 ENCODE 1 100 ENCFF058FFZ, ENCFF643CGH, ENCFF674GQJ 3562573023 ENCODE Processing Pipeline 37d2259cbdcd802eef322b188bdcdea1 https://www.encodeproject.org/files/ENCFF877RVZ/@@download/ENCFF877RVZ.bam GRCh38 released low read depth experiment not submitted to GEO partially characterized antibody ENCFF377CEZ bigWig signal p-value ENCSR325RLL ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2B-human ENCAB069SSA DNA False 2018-01-26 ENCODE 1 ENCFF877RVZ, ENCFF910IKB 1031297292 ENCODE Processing Pipeline b51edd4568de5ab677aa523734fcfa9d https://www.encodeproject.org/files/ENCFF377CEZ/@@download/ENCFF377CEZ.bigWig GRCh38 released low read depth experiment not submitted to GEO partially characterized antibody ENCFF814SMU bigWig signal p-value ENCSR325RLL ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2B-human ENCAB069SSA DNA False 2018-01-26 ENCODE 2 ENCFF227IZS, ENCFF995XZH 934123986 ENCODE Processing Pipeline 247a9f860ef9cad6817e34361ccaf479 https://www.encodeproject.org/files/ENCFF814SMU/@@download/ENCFF814SMU.bigWig GRCh38 released low read depth experiment not submitted to GEO partially characterized antibody ENCFF286BLX bigWig signal p-value ENCSR325RLL ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2B-human ENCAB069SSA DNA False 2018-01-26 ENCODE 1, 2 ENCFF227IZS, ENCFF877RVZ, ENCFF910IKB, ENCFF995XZH 1883114618 ENCODE Processing Pipeline 225fe86f17591ff454b885b0b802ebd7 https://www.encodeproject.org/files/ENCFF286BLX/@@download/ENCFF286BLX.bigWig GRCh38 released low read depth experiment not submitted to GEO partially characterized antibody ENCFF074MCV bigWig fold change over control ENCSR325RLL ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2B-human ENCAB069SSA DNA False 2018-01-26 ENCODE 1 ENCFF877RVZ, ENCFF910IKB 1052559580 ENCODE Processing Pipeline e4efbaa960f1ead90e153d85a138c434 https://www.encodeproject.org/files/ENCFF074MCV/@@download/ENCFF074MCV.bigWig GRCh38 released low read depth experiment not submitted to GEO partially characterized antibody ENCFF582HMX bigWig fold change over control ENCSR325RLL ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2B-human ENCAB069SSA DNA False 2018-01-26 ENCODE 2 ENCFF227IZS, ENCFF995XZH 977236504 ENCODE Processing Pipeline 60c571f190562e004e3af232f1fbd3e4 https://www.encodeproject.org/files/ENCFF582HMX/@@download/ENCFF582HMX.bigWig GRCh38 released low read depth experiment not submitted to GEO partially characterized antibody ENCFF300YKS bigWig fold change over control ENCSR325RLL ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2B-human ENCAB069SSA DNA False 2018-01-26 ENCODE 1, 2 ENCFF227IZS, ENCFF877RVZ, ENCFF910IKB, ENCFF995XZH 1896523858 ENCODE Processing Pipeline 50b255d8f9d23bc42b6cb7f0362db08c https://www.encodeproject.org/files/ENCFF300YKS/@@download/ENCFF300YKS.bigWig GRCh38 released low read depth experiment not submitted to GEO partially characterized antibody ENCFF222TPO bed narrowPeak peaks ENCSR325RLL ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2B-human ENCAB069SSA DNA False 2018-01-26 ENCODE 1 ENCFF877RVZ, ENCFF910IKB 7026204 ENCODE Processing Pipeline 389c879849e9dd9b40d8ea053ab24beb https://www.encodeproject.org/files/ENCFF222TPO/@@download/ENCFF222TPO.bed.gz GRCh38 released low read depth experiment not submitted to GEO partially characterized antibody ENCFF614AUL bed narrowPeak peaks ENCSR325RLL ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2B-human ENCAB069SSA DNA False 2018-01-26 ENCODE 2 ENCFF227IZS, ENCFF995XZH 6943742 ENCODE Processing Pipeline 247a67bf24d33228074839a7f4f8dfec https://www.encodeproject.org/files/ENCFF614AUL/@@download/ENCFF614AUL.bed.gz GRCh38 released low read depth experiment not submitted to GEO partially characterized antibody ENCFF269WRB bed narrowPeak peaks ENCSR325RLL ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2B-human ENCAB069SSA DNA False 2018-01-26 ENCODE 1, 2 ENCFF227IZS, ENCFF877RVZ, ENCFF910IKB, ENCFF995XZH 7176619 ENCODE Processing Pipeline d6d54db68ac950eddad7b7d5a5426af0 https://www.encodeproject.org/files/ENCFF269WRB/@@download/ENCFF269WRB.bed.gz GRCh38 released low read depth experiment not submitted to GEO partially characterized antibody ENCFF074KAF bigBed narrowPeak peaks ENCSR325RLL ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2B-human ENCAB069SSA DNA False 2018-01-26 ENCODE 1 ENCFF222TPO 12531261 ENCODE Processing Pipeline a4718e570b02cad7ed19a155afc731ae https://www.encodeproject.org/files/ENCFF074KAF/@@download/ENCFF074KAF.bigBed GRCh38 released low read depth experiment not submitted to GEO partially characterized antibody ENCFF979JSU bigBed narrowPeak peaks ENCSR325RLL ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2B-human ENCAB069SSA DNA False 2018-01-26 ENCODE 2 ENCFF614AUL 12656059 ENCODE Processing Pipeline 96fd058bbb0e80a1de201bfacd968380 https://www.encodeproject.org/files/ENCFF979JSU/@@download/ENCFF979JSU.bigBed GRCh38 released low read depth experiment not submitted to GEO partially characterized antibody ENCFF207UXX bigBed narrowPeak peaks ENCSR325RLL ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2B-human ENCAB069SSA DNA False 2018-01-26 ENCODE 1, 2 ENCFF269WRB 12257002 ENCODE Processing Pipeline 538818f2c40255cc26ed3caaf8006a03 https://www.encodeproject.org/files/ENCFF207UXX/@@download/ENCFF207UXX.bigBed GRCh38 released low read depth experiment not submitted to GEO partially characterized antibody ENCFF779AZS bed narrowPeak conservative idr thresholded peaks ENCSR325RLL ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2B-human ENCAB069SSA DNA False 2018-01-26 ENCODE 1, 2 ENCFF222TPO, ENCFF269WRB, ENCFF419RSJ, ENCFF614AUL 337019 ENCODE Processing Pipeline 82209c8de6a76362a080542762c61bd2 https://www.encodeproject.org/files/ENCFF779AZS/@@download/ENCFF779AZS.bed.gz GRCh38 released low read depth experiment not submitted to GEO partially characterized antibody ENCFF988KJQ bigBed narrowPeak conservative idr thresholded peaks ENCSR325RLL ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2B-human ENCAB069SSA DNA False 2018-01-26 ENCODE 1, 2 ENCFF779AZS 852380 ENCODE Processing Pipeline f7211a7175a17b650c1cdb33f98c981a https://www.encodeproject.org/files/ENCFF988KJQ/@@download/ENCFF988KJQ.bigBed GRCh38 released low read depth experiment not submitted to GEO partially characterized antibody ENCFF078TXM bed narrowPeak optimal idr thresholded peaks ENCSR325RLL ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2B-human ENCAB069SSA DNA False 2018-01-26 ENCODE 1, 2 ENCFF222TPO, ENCFF269WRB, ENCFF419RSJ, ENCFF614AUL 374704 ENCODE Processing Pipeline cf30fcf78bc41a9d0703a890940edb6b https://www.encodeproject.org/files/ENCFF078TXM/@@download/ENCFF078TXM.bed.gz GRCh38 released low read depth experiment not submitted to GEO partially characterized antibody ENCFF362HAC bigBed narrowPeak optimal idr thresholded peaks ENCSR325RLL ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2B-human ENCAB069SSA DNA False 2018-01-26 ENCODE 1, 2 ENCFF078TXM 927749 ENCODE Processing Pipeline 525c6c541afd611998f40490241505a4 https://www.encodeproject.org/files/ENCFF362HAC/@@download/ENCFF362HAC.bigBed GRCh38 released low read depth experiment not submitted to GEO partially characterized antibody ENCFF872JJJ bed narrowPeak optimal idr thresholded peaks ENCSR325RLL ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2B-human ENCAB069SSA DNA False 2018-01-26 ENCODE 1, 2 ENCFF001TDO, ENCFF230UQS, ENCFF255HKN, ENCFF729LTY 333967 ENCODE Processing Pipeline 4fa731cb3c8d39c1c5bd2b21cd149768 https://www.encodeproject.org/files/ENCFF872JJJ/@@download/ENCFF872JJJ.bed.gz hg19 released low read depth experiment not submitted to GEO partially characterized antibody ENCFF208SDV bigBed narrowPeak optimal idr thresholded peaks ENCSR325RLL ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2B-human ENCAB069SSA DNA False 2018-01-26 ENCODE 1, 2 ENCFF872JJJ 702824 ENCODE Processing Pipeline c6dd66b70c9ec20c77b9b1b7d1ace8e3 https://www.encodeproject.org/files/ENCFF208SDV/@@download/ENCFF208SDV.bigBed hg19 released low read depth experiment not submitted to GEO partially characterized antibody ENCFF810SHF bed narrowPeak conservative idr thresholded peaks ENCSR325RLL ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2B-human ENCAB069SSA DNA False 2018-01-26 ENCODE 1, 2 ENCFF001TDO, ENCFF230UQS, ENCFF255HKN, ENCFF729LTY 292155 ENCODE Processing Pipeline 8f4cc64e7f84be32683849bdaebe11af https://www.encodeproject.org/files/ENCFF810SHF/@@download/ENCFF810SHF.bed.gz hg19 released low read depth experiment not submitted to GEO partially characterized antibody ENCFF954DTY bigBed narrowPeak conservative idr thresholded peaks ENCSR325RLL ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2B-human ENCAB069SSA DNA False 2018-01-26 ENCODE 1, 2 ENCFF810SHF 640695 ENCODE Processing Pipeline ef06de9b3f93a81f1bc4adf22544824c https://www.encodeproject.org/files/ENCFF954DTY/@@download/ENCFF954DTY.bigBed hg19 released low read depth experiment not submitted to GEO partially characterized antibody ENCFF522MWJ fastq reads ENCSR598GER ChIP-seq EFO:0002067 K562 cell line Homo sapiens CCAR2-human ENCAB005NAZ DNA SDS formaldehyde False 2017-12-01 ENCODE 2 1 40 single-ended 605657482 Xiang-Dong Fu, UCSD bbe4b90200d9268cae014c7b5f922dee https://www.encodeproject.org/files/ENCFF522MWJ/@@download/ENCFF522MWJ.fastq.gz Illumina HiSeq 2500 /files/ENCFF201ZVH/ released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF905CNP fastq reads ENCSR598GER ChIP-seq EFO:0002067 K562 cell line Homo sapiens CCAR2-human ENCAB005NAZ DNA SDS formaldehyde False 2017-12-01 ENCODE 1 1 40 single-ended 589508696 Xiang-Dong Fu, UCSD 5c22f0b6ba4cb9c9e42c12a8d25ba11f https://www.encodeproject.org/files/ENCFF905CNP/@@download/ENCFF905CNP.fastq.gz Illumina HiSeq 2500 /files/ENCFF025UQF/ released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF743WPX bam alignments ENCSR598GER ChIP-seq EFO:0002067 K562 cell line Homo sapiens CCAR2-human ENCAB005NAZ DNA SDS formaldehyde False 2017-12-01 ENCODE 2 40 ENCFF522MWJ, ENCFF807MUK 433971631 ENCODE Processing Pipeline 8f8f16256ee3a71a60638632fb0d7874 https://www.encodeproject.org/files/ENCFF743WPX/@@download/ENCFF743WPX.bam hg19 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF276NAQ bam unfiltered alignments ENCSR598GER ChIP-seq EFO:0002067 K562 cell line Homo sapiens CCAR2-human ENCAB005NAZ DNA SDS formaldehyde False 2017-12-01 ENCODE 2 40 ENCFF522MWJ, ENCFF807MUK 803714630 ENCODE Processing Pipeline 95baccd9c519a8562f28aabdc3f10c1f https://www.encodeproject.org/files/ENCFF276NAQ/@@download/ENCFF276NAQ.bam hg19 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF674CKY bam unfiltered alignments ENCSR598GER ChIP-seq EFO:0002067 K562 cell line Homo sapiens CCAR2-human ENCAB005NAZ DNA SDS formaldehyde False 2017-12-01 ENCODE 2 40 ENCFF522MWJ, ENCFF643CGH 806851509 ENCODE Processing Pipeline 8f1486f776b68d3a5e42cc36319abe31 https://www.encodeproject.org/files/ENCFF674CKY/@@download/ENCFF674CKY.bam GRCh38 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF242PNV bam unfiltered alignments ENCSR598GER ChIP-seq EFO:0002067 K562 cell line Homo sapiens CCAR2-human ENCAB005NAZ DNA SDS formaldehyde False 2017-12-01 ENCODE 1 40 ENCFF807MUK, ENCFF905CNP 780660528 ENCODE Processing Pipeline 31e97ac83245131f828cf2b9b9e07db1 https://www.encodeproject.org/files/ENCFF242PNV/@@download/ENCFF242PNV.bam hg19 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF366SWW bam alignments ENCSR598GER ChIP-seq EFO:0002067 K562 cell line Homo sapiens CCAR2-human ENCAB005NAZ DNA SDS formaldehyde False 2017-12-01 ENCODE 2 40 ENCFF522MWJ, ENCFF643CGH 433410939 ENCODE Processing Pipeline 1d48d6f06904ee37cd550974730d570c https://www.encodeproject.org/files/ENCFF366SWW/@@download/ENCFF366SWW.bam GRCh38 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF280IUC bam alignments ENCSR598GER ChIP-seq EFO:0002067 K562 cell line Homo sapiens CCAR2-human ENCAB005NAZ DNA SDS formaldehyde False 2017-12-01 ENCODE 1 40 ENCFF807MUK, ENCFF905CNP 421090299 ENCODE Processing Pipeline 0f72be0ce9cc3ca484f8c43fee7361bc https://www.encodeproject.org/files/ENCFF280IUC/@@download/ENCFF280IUC.bam hg19 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF418IAI bam alignments ENCSR598GER ChIP-seq EFO:0002067 K562 cell line Homo sapiens CCAR2-human ENCAB005NAZ DNA SDS formaldehyde False 2017-12-01 ENCODE 1 40 ENCFF643CGH, ENCFF905CNP 420497232 ENCODE Processing Pipeline fee829188bb41f1eb083953f9ca4fb27 https://www.encodeproject.org/files/ENCFF418IAI/@@download/ENCFF418IAI.bam GRCh38 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF221IKQ bam unfiltered alignments ENCSR598GER ChIP-seq EFO:0002067 K562 cell line Homo sapiens CCAR2-human ENCAB005NAZ DNA SDS formaldehyde False 2017-12-01 ENCODE 1 40 ENCFF643CGH, ENCFF905CNP 783275131 ENCODE Processing Pipeline 06bf248bfb290aa9e3ecd959da778861 https://www.encodeproject.org/files/ENCFF221IKQ/@@download/ENCFF221IKQ.bam GRCh38 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF353AGJ bigBed narrowPeak peaks ENCSR598GER ChIP-seq EFO:0002067 K562 cell line Homo sapiens CCAR2-human ENCAB005NAZ DNA SDS formaldehyde False 2017-12-01 ENCODE 1 ENCFF477IOW 10552911 ENCODE Processing Pipeline 8e256f2cf332cd14f13bbbafa6eb2034 https://www.encodeproject.org/files/ENCFF353AGJ/@@download/ENCFF353AGJ.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF928GCC bigWig fold change over control ENCSR598GER ChIP-seq EFO:0002067 K562 cell line Homo sapiens CCAR2-human ENCAB005NAZ DNA SDS formaldehyde False 2017-12-01 ENCODE 2 ENCFF366SWW 282306378 ENCODE Processing Pipeline f7567182201346046b6ded743944f322 https://www.encodeproject.org/files/ENCFF928GCC/@@download/ENCFF928GCC.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF695QLX bigWig signal p-value ENCSR598GER ChIP-seq EFO:0002067 K562 cell line Homo sapiens CCAR2-human ENCAB005NAZ DNA SDS formaldehyde False 2017-12-01 ENCODE 2 ENCFF366SWW 379286918 ENCODE Processing Pipeline f38696e8f9089f8d3918b495af0a6356 https://www.encodeproject.org/files/ENCFF695QLX/@@download/ENCFF695QLX.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF477IOW bed narrowPeak peaks ENCSR598GER ChIP-seq EFO:0002067 K562 cell line Homo sapiens CCAR2-human ENCAB005NAZ DNA SDS formaldehyde False 2017-12-01 ENCODE 1 ENCFF418IAI 4479728 ENCODE Processing Pipeline f863948f324fbcea38b89f5d05ce6e22 https://www.encodeproject.org/files/ENCFF477IOW/@@download/ENCFF477IOW.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF810ZWL bigWig signal p-value ENCSR598GER ChIP-seq EFO:0002067 K562 cell line Homo sapiens CCAR2-human ENCAB005NAZ DNA SDS formaldehyde False 2017-12-01 ENCODE 1, 2 ENCFF366SWW, ENCFF418IAI 718173053 ENCODE Processing Pipeline 19da1094cf0901e8df80ddfd3cf6a0e9 https://www.encodeproject.org/files/ENCFF810ZWL/@@download/ENCFF810ZWL.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF432QQR bigWig fold change over control ENCSR598GER ChIP-seq EFO:0002067 K562 cell line Homo sapiens CCAR2-human ENCAB005NAZ DNA SDS formaldehyde False 2017-12-01 ENCODE 1 ENCFF418IAI 268096449 ENCODE Processing Pipeline 9eabd0ee05c62a01fe7e16154cae48ad https://www.encodeproject.org/files/ENCFF432QQR/@@download/ENCFF432QQR.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF909GFF bigWig signal p-value ENCSR598GER ChIP-seq EFO:0002067 K562 cell line Homo sapiens CCAR2-human ENCAB005NAZ DNA SDS formaldehyde False 2017-12-01 ENCODE 1 ENCFF418IAI 380335714 ENCODE Processing Pipeline 6399ff9d28320eca15cf27d5de7f2049 https://www.encodeproject.org/files/ENCFF909GFF/@@download/ENCFF909GFF.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF345XUQ bed narrowPeak peaks ENCSR598GER ChIP-seq EFO:0002067 K562 cell line Homo sapiens CCAR2-human ENCAB005NAZ DNA SDS formaldehyde False 2017-12-01 ENCODE 2 ENCFF366SWW 4258937 ENCODE Processing Pipeline dad18a3df6c07a43daec3c00c21bd394 https://www.encodeproject.org/files/ENCFF345XUQ/@@download/ENCFF345XUQ.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF298ZSE bed narrowPeak peaks ENCSR598GER ChIP-seq EFO:0002067 K562 cell line Homo sapiens CCAR2-human ENCAB005NAZ DNA SDS formaldehyde False 2017-12-01 ENCODE 1, 2 ENCFF366SWW, ENCFF418IAI 5725770 ENCODE Processing Pipeline b1fa4846649da9a2d883b51e72d254bd https://www.encodeproject.org/files/ENCFF298ZSE/@@download/ENCFF298ZSE.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF442GXI bigBed narrowPeak peaks ENCSR598GER ChIP-seq EFO:0002067 K562 cell line Homo sapiens CCAR2-human ENCAB005NAZ DNA SDS formaldehyde False 2017-12-01 ENCODE 2 ENCFF345XUQ 10376303 ENCODE Processing Pipeline 4be7504bec53ec1bb904f2fb8fbbbaea https://www.encodeproject.org/files/ENCFF442GXI/@@download/ENCFF442GXI.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF177MFI bigBed narrowPeak peaks ENCSR598GER ChIP-seq EFO:0002067 K562 cell line Homo sapiens CCAR2-human ENCAB005NAZ DNA SDS formaldehyde False 2017-12-01 ENCODE 1, 2 ENCFF298ZSE 13309775 ENCODE Processing Pipeline d3d30d4f85b0f3619a8c61765fc2e27f https://www.encodeproject.org/files/ENCFF177MFI/@@download/ENCFF177MFI.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF642YKQ bigWig fold change over control ENCSR598GER ChIP-seq EFO:0002067 K562 cell line Homo sapiens CCAR2-human ENCAB005NAZ DNA SDS formaldehyde False 2017-12-01 ENCODE 1, 2 ENCFF366SWW, ENCFF418IAI 637923636 ENCODE Processing Pipeline 48a22f78851def6339dcaaeca0ffef82 https://www.encodeproject.org/files/ENCFF642YKQ/@@download/ENCFF642YKQ.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF704PGT bed narrowPeak optimal idr thresholded peaks ENCSR598GER ChIP-seq EFO:0002067 K562 cell line Homo sapiens CCAR2-human ENCAB005NAZ DNA SDS formaldehyde False 2017-12-01 ENCODE 1, 2 ENCFF298ZSE, ENCFF345XUQ, ENCFF419RSJ, ENCFF477IOW 11578 ENCODE Processing Pipeline 5b9f6b6369948fc225c0e019726dee1c https://www.encodeproject.org/files/ENCFF704PGT/@@download/ENCFF704PGT.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF457TVR bed narrowPeak conservative idr thresholded peaks ENCSR598GER ChIP-seq EFO:0002067 K562 cell line Homo sapiens CCAR2-human ENCAB005NAZ DNA SDS formaldehyde False 2017-12-01 ENCODE 1, 2 ENCFF298ZSE, ENCFF345XUQ, ENCFF419RSJ, ENCFF477IOW 9524 ENCODE Processing Pipeline c87946c31ac0295be3ee3e4e04e5ebb1 https://www.encodeproject.org/files/ENCFF457TVR/@@download/ENCFF457TVR.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF873IAB bigBed narrowPeak optimal idr thresholded peaks ENCSR598GER ChIP-seq EFO:0002067 K562 cell line Homo sapiens CCAR2-human ENCAB005NAZ DNA SDS formaldehyde False 2017-12-01 ENCODE 1, 2 ENCFF704PGT 92110 ENCODE Processing Pipeline cd34c4f6eaec7227d635b21ae89b26d0 https://www.encodeproject.org/files/ENCFF873IAB/@@download/ENCFF873IAB.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF187HZZ bigBed narrowPeak conservative idr thresholded peaks ENCSR598GER ChIP-seq EFO:0002067 K562 cell line Homo sapiens CCAR2-human ENCAB005NAZ DNA SDS formaldehyde False 2017-12-01 ENCODE 1, 2 ENCFF457TVR 97220 ENCODE Processing Pipeline efe2bb291e67e6b8a8b36e7010ff845f https://www.encodeproject.org/files/ENCFF187HZZ/@@download/ENCFF187HZZ.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF379EHI bigWig signal p-value ENCSR598GER ChIP-seq EFO:0002067 K562 cell line Homo sapiens CCAR2-human ENCAB005NAZ DNA SDS formaldehyde False 2017-12-01 ENCODE 1 ENCFF280IUC, ENCFF477SGV 372861123 ENCODE Processing Pipeline 16eed08786fa3c1cf49a32faebc1344f https://www.encodeproject.org/files/ENCFF379EHI/@@download/ENCFF379EHI.bigWig hg19 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF151PBI bigWig signal p-value ENCSR598GER ChIP-seq EFO:0002067 K562 cell line Homo sapiens CCAR2-human ENCAB005NAZ DNA SDS formaldehyde False 2017-12-01 ENCODE 1, 2 ENCFF280IUC, ENCFF477SGV, ENCFF705ZEH, ENCFF743WPX 735809027 ENCODE Processing Pipeline 5db97c1be0eabe9e0370dfb195d5e313 https://www.encodeproject.org/files/ENCFF151PBI/@@download/ENCFF151PBI.bigWig hg19 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF583GKE bed narrowPeak optimal idr thresholded peaks ENCSR598GER ChIP-seq EFO:0002067 K562 cell line Homo sapiens CCAR2-human ENCAB005NAZ DNA SDS formaldehyde False 2017-12-01 ENCODE 1, 2 ENCFF001TDO, ENCFF470GVA, ENCFF580YZC, ENCFF655DKD 10866 ENCODE Processing Pipeline e86487c2f5bfd083078a70a39589e586 https://www.encodeproject.org/files/ENCFF583GKE/@@download/ENCFF583GKE.bed.gz hg19 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF655VMC bigWig fold change over control ENCSR598GER ChIP-seq EFO:0002067 K562 cell line Homo sapiens CCAR2-human ENCAB005NAZ DNA SDS formaldehyde False 2017-12-01 ENCODE 2 ENCFF705ZEH, ENCFF743WPX 267856650 ENCODE Processing Pipeline 1bc28ca7aa903fe1d912e6b564cb4926 https://www.encodeproject.org/files/ENCFF655VMC/@@download/ENCFF655VMC.bigWig hg19 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF655DKD bed narrowPeak peaks ENCSR598GER ChIP-seq EFO:0002067 K562 cell line Homo sapiens CCAR2-human ENCAB005NAZ DNA SDS formaldehyde False 2017-12-01 ENCODE 1, 2 ENCFF280IUC, ENCFF477SGV, ENCFF705ZEH, ENCFF743WPX 5726329 ENCODE Processing Pipeline 917e885fcc5ff0ed37a77d8afb906701 https://www.encodeproject.org/files/ENCFF655DKD/@@download/ENCFF655DKD.bed.gz hg19 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF626OFL bigWig signal p-value ENCSR598GER ChIP-seq EFO:0002067 K562 cell line Homo sapiens CCAR2-human ENCAB005NAZ DNA SDS formaldehyde False 2017-12-01 ENCODE 2 ENCFF705ZEH, ENCFF743WPX 439658940 ENCODE Processing Pipeline 6157487a50ff8bd16a83cce590fd38e1 https://www.encodeproject.org/files/ENCFF626OFL/@@download/ENCFF626OFL.bigWig hg19 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF862OJY bigWig fold change over control ENCSR598GER ChIP-seq EFO:0002067 K562 cell line Homo sapiens CCAR2-human ENCAB005NAZ DNA SDS formaldehyde False 2017-12-01 ENCODE 1 ENCFF280IUC, ENCFF477SGV 266791767 ENCODE Processing Pipeline fe3096da11ab5f07af3f63a4554082c3 https://www.encodeproject.org/files/ENCFF862OJY/@@download/ENCFF862OJY.bigWig hg19 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF254GMG bigBed narrowPeak peaks ENCSR598GER ChIP-seq EFO:0002067 K562 cell line Homo sapiens CCAR2-human ENCAB005NAZ DNA SDS formaldehyde False 2017-12-01 ENCODE 1, 2 ENCFF655DKD 13295293 ENCODE Processing Pipeline da4aaa0c1f3af4941b741f18ea41105f https://www.encodeproject.org/files/ENCFF254GMG/@@download/ENCFF254GMG.bigBed hg19 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF761YMH bigWig fold change over control ENCSR598GER ChIP-seq EFO:0002067 K562 cell line Homo sapiens CCAR2-human ENCAB005NAZ DNA SDS formaldehyde False 2017-12-01 ENCODE 1, 2 ENCFF280IUC, ENCFF477SGV, ENCFF705ZEH, ENCFF743WPX 620980626 ENCODE Processing Pipeline 72069c064891e6a115a54d8bb02141a3 https://www.encodeproject.org/files/ENCFF761YMH/@@download/ENCFF761YMH.bigWig hg19 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF580YZC bed narrowPeak peaks ENCSR598GER ChIP-seq EFO:0002067 K562 cell line Homo sapiens CCAR2-human ENCAB005NAZ DNA SDS formaldehyde False 2017-12-01 ENCODE 1 ENCFF280IUC, ENCFF477SGV 4439473 ENCODE Processing Pipeline 0071dbbbdc8a024e819944fc4bb4ebe8 https://www.encodeproject.org/files/ENCFF580YZC/@@download/ENCFF580YZC.bed.gz hg19 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF470GVA bed narrowPeak peaks ENCSR598GER ChIP-seq EFO:0002067 K562 cell line Homo sapiens CCAR2-human ENCAB005NAZ DNA SDS formaldehyde False 2017-12-01 ENCODE 2 ENCFF705ZEH, ENCFF743WPX 4288879 ENCODE Processing Pipeline c50030cc451b3918150cb26cce04d51b https://www.encodeproject.org/files/ENCFF470GVA/@@download/ENCFF470GVA.bed.gz hg19 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF853SVN bigBed narrowPeak peaks ENCSR598GER ChIP-seq EFO:0002067 K562 cell line Homo sapiens CCAR2-human ENCAB005NAZ DNA SDS formaldehyde False 2017-12-01 ENCODE 1 ENCFF580YZC 10535705 ENCODE Processing Pipeline 8622198d66a2c1bb6c4c1f8aa3789ed0 https://www.encodeproject.org/files/ENCFF853SVN/@@download/ENCFF853SVN.bigBed hg19 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF829PUD bigBed narrowPeak conservative idr thresholded peaks ENCSR598GER ChIP-seq EFO:0002067 K562 cell line Homo sapiens CCAR2-human ENCAB005NAZ DNA SDS formaldehyde False 2017-12-01 ENCODE 1, 2 ENCFF983SZW 86474 ENCODE Processing Pipeline 0f9612c76fc966f9128294fbe7e067f0 https://www.encodeproject.org/files/ENCFF829PUD/@@download/ENCFF829PUD.bigBed hg19 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF690WTD bigBed narrowPeak peaks ENCSR598GER ChIP-seq EFO:0002067 K562 cell line Homo sapiens CCAR2-human ENCAB005NAZ DNA SDS formaldehyde False 2017-12-01 ENCODE 2 ENCFF470GVA 10422809 ENCODE Processing Pipeline c379b7944a59b2db6ecb17aacb309303 https://www.encodeproject.org/files/ENCFF690WTD/@@download/ENCFF690WTD.bigBed hg19 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF983SZW bed narrowPeak conservative idr thresholded peaks ENCSR598GER ChIP-seq EFO:0002067 K562 cell line Homo sapiens CCAR2-human ENCAB005NAZ DNA SDS formaldehyde False 2017-12-01 ENCODE 1, 2 ENCFF001TDO, ENCFF470GVA, ENCFF580YZC, ENCFF655DKD 9724 ENCODE Processing Pipeline d9bd45804fecfe4e1861cb0d911ee5ea https://www.encodeproject.org/files/ENCFF983SZW/@@download/ENCFF983SZW.bed.gz hg19 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF960EEB bigBed narrowPeak optimal idr thresholded peaks ENCSR598GER ChIP-seq EFO:0002067 K562 cell line Homo sapiens CCAR2-human ENCAB005NAZ DNA SDS formaldehyde False 2017-12-01 ENCODE 1, 2 ENCFF583GKE 89291 ENCODE Processing Pipeline 7ea877c239174bbcab81e14f9754b7c3 https://www.encodeproject.org/files/ENCFF960EEB/@@download/ENCFF960EEB.bigBed hg19 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF381VYX bam unfiltered alignments ENCSR230PTV ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB2-human ENCAB543JMP DNA False 2016-12-19 ENCODE 1 100 ENCFF223BRR, ENCFF807MUK, ENCFF839NSQ 4171736374 ENCODE Processing Pipeline 1f630e00033c4d894099d5124e4c8fe8 https://www.encodeproject.org/files/ENCFF381VYX/@@download/ENCFF381VYX.bam hg19 released antibody characterized with exemption ENCFF294LPO bam unfiltered alignments ENCSR230PTV ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB2-human ENCAB543JMP DNA False 2016-12-19 ENCODE 2 100 ENCFF796XXQ, ENCFF807MUK, ENCFF920GKJ 5226805545 ENCODE Processing Pipeline d89f525ba16cb7e4118c3ad644143d5f https://www.encodeproject.org/files/ENCFF294LPO/@@download/ENCFF294LPO.bam hg19 released antibody characterized with exemption ENCFF796XXQ fastq reads ENCSR230PTV ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB2-human ENCAB543JMP DNA False 2016-12-19 ENCODE 2 1 100 paired-ended 1 ENCFF920GKJ 2384931372 Michael Snyder, Stanford f66c96b9bed280a40f377945ba99e195 SRA:SRR6212906 https://www.encodeproject.org/files/ENCFF796XXQ/@@download/ENCFF796XXQ.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFD/ released antibody characterized with exemption ENCFF920GKJ fastq reads ENCSR230PTV ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB2-human ENCAB543JMP DNA False 2016-12-19 ENCODE 2 1 100 paired-ended 2 ENCFF796XXQ 2402346911 Michael Snyder, Stanford 3025002ed12d81769af60970550df16b SRA:SRR6212906 https://www.encodeproject.org/files/ENCFF920GKJ/@@download/ENCFF920GKJ.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFA/ released antibody characterized with exemption ENCFF223BRR fastq reads ENCSR230PTV ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB2-human ENCAB543JMP DNA False 2016-12-19 ENCODE 1 1 100 paired-ended 1 ENCFF839NSQ 1894725576 Michael Snyder, Stanford 1962bd9362f4c524fdb8ed4e16ad003b SRA:SRR6212905 https://www.encodeproject.org/files/ENCFF223BRR/@@download/ENCFF223BRR.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFF/ released antibody characterized with exemption ENCFF839NSQ fastq reads ENCSR230PTV ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB2-human ENCAB543JMP DNA False 2016-12-19 ENCODE 1 1 100 paired-ended 2 ENCFF223BRR 1912469538 Michael Snyder, Stanford 5a6b044a35627790795f45a6bede2d5b SRA:SRR6212905 https://www.encodeproject.org/files/ENCFF839NSQ/@@download/ENCFF839NSQ.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFH/ released antibody characterized with exemption ENCFF207HQD bam alignments ENCSR230PTV ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB2-human ENCAB543JMP DNA False 2016-12-19 ENCODE 1 100 ENCFF223BRR, ENCFF807MUK, ENCFF839NSQ 3646007174 ENCODE Processing Pipeline 19bfd74c7f090db1c0c727af95631130 https://www.encodeproject.org/files/ENCFF207HQD/@@download/ENCFF207HQD.bam hg19 released antibody characterized with exemption ENCFF153FSJ bam alignments ENCSR230PTV ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB2-human ENCAB543JMP DNA False 2016-12-19 ENCODE 2 100 ENCFF796XXQ, ENCFF807MUK, ENCFF920GKJ 4522759436 ENCODE Processing Pipeline 5ca27eed13dc3a23c32b0d17a8f36e0f https://www.encodeproject.org/files/ENCFF153FSJ/@@download/ENCFF153FSJ.bam hg19 released antibody characterized with exemption ENCFF439NEC bigWig signal p-value ENCSR230PTV ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB2-human ENCAB543JMP DNA False 2016-12-19 ENCODE 1 ENCFF207HQD, ENCFF581ZJL 1137678985 ENCODE Processing Pipeline a26f1572fdf6b69725bc3aecf1972682 https://www.encodeproject.org/files/ENCFF439NEC/@@download/ENCFF439NEC.bigWig hg19 released antibody characterized with exemption ENCFF243VBE bigWig signal p-value ENCSR230PTV ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB2-human ENCAB543JMP DNA False 2016-12-19 ENCODE 2 ENCFF051LWI, ENCFF153FSJ 1119871740 ENCODE Processing Pipeline da98f40f35ced94b48ab4dcb87f50227 https://www.encodeproject.org/files/ENCFF243VBE/@@download/ENCFF243VBE.bigWig hg19 released antibody characterized with exemption ENCFF217PUI bigWig signal p-value ENCSR230PTV ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB2-human ENCAB543JMP DNA False 2016-12-19 ENCODE 1, 2 ENCFF051LWI, ENCFF153FSJ, ENCFF207HQD, ENCFF581ZJL 1790698260 ENCODE Processing Pipeline d3815e3722b1a28c3d13d7719c69e812 https://www.encodeproject.org/files/ENCFF217PUI/@@download/ENCFF217PUI.bigWig hg19 released antibody characterized with exemption ENCFF664JOR bigWig fold change over control ENCSR230PTV ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB2-human ENCAB543JMP DNA False 2016-12-19 ENCODE 1 ENCFF207HQD, ENCFF581ZJL 1081020142 ENCODE Processing Pipeline ea528dfb1691e2864e8c1f75a79e5c25 https://www.encodeproject.org/files/ENCFF664JOR/@@download/ENCFF664JOR.bigWig hg19 released antibody characterized with exemption ENCFF564ODS bigWig fold change over control ENCSR230PTV ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB2-human ENCAB543JMP DNA False 2016-12-19 ENCODE 2 ENCFF051LWI, ENCFF153FSJ 1195500121 ENCODE Processing Pipeline 43d5acb0d85e827e2193e458747dfcc5 https://www.encodeproject.org/files/ENCFF564ODS/@@download/ENCFF564ODS.bigWig hg19 released antibody characterized with exemption ENCFF715FKT bigWig fold change over control ENCSR230PTV ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB2-human ENCAB543JMP DNA False 2016-12-19 ENCODE 1, 2 ENCFF051LWI, ENCFF153FSJ, ENCFF207HQD, ENCFF581ZJL 2083794349 ENCODE Processing Pipeline 8853a71a6d92da06524d09a2bd8a0c74 https://www.encodeproject.org/files/ENCFF715FKT/@@download/ENCFF715FKT.bigWig hg19 released antibody characterized with exemption ENCFF537WGM bed narrowPeak peaks ENCSR230PTV ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB2-human ENCAB543JMP DNA False 2016-12-19 ENCODE 1 ENCFF207HQD, ENCFF581ZJL 6921340 ENCODE Processing Pipeline 93a0ffdf4ad41df3b9c58f6d97807eab https://www.encodeproject.org/files/ENCFF537WGM/@@download/ENCFF537WGM.bed.gz hg19 released antibody characterized with exemption ENCFF551YGS bed narrowPeak peaks ENCSR230PTV ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB2-human ENCAB543JMP DNA False 2016-12-19 ENCODE 2 ENCFF051LWI, ENCFF153FSJ 6917819 ENCODE Processing Pipeline 2cae284037126b33f97ce7c6234a34f6 https://www.encodeproject.org/files/ENCFF551YGS/@@download/ENCFF551YGS.bed.gz hg19 released antibody characterized with exemption ENCFF145ZDC bigBed narrowPeak peaks ENCSR230PTV ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB2-human ENCAB543JMP DNA False 2016-12-19 ENCODE 2 ENCFF551YGS 13169257 ENCODE Processing Pipeline 0291c7d2163cf54f561f84110e1ccc24 https://www.encodeproject.org/files/ENCFF145ZDC/@@download/ENCFF145ZDC.bigBed hg19 released antibody characterized with exemption ENCFF621XGF bed narrowPeak peaks ENCSR230PTV ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB2-human ENCAB543JMP DNA False 2016-12-19 ENCODE 1, 2 ENCFF051LWI, ENCFF153FSJ, ENCFF207HQD, ENCFF581ZJL 7237247 ENCODE Processing Pipeline c804f8189ce60593dc50092e9f736670 https://www.encodeproject.org/files/ENCFF621XGF/@@download/ENCFF621XGF.bed.gz hg19 released antibody characterized with exemption ENCFF713NTM bigBed narrowPeak peaks ENCSR230PTV ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB2-human ENCAB543JMP DNA False 2016-12-19 ENCODE 1 ENCFF537WGM 12868324 ENCODE Processing Pipeline 2b9b5ec46ca02ac534bebaec33b97c2a https://www.encodeproject.org/files/ENCFF713NTM/@@download/ENCFF713NTM.bigBed hg19 released antibody characterized with exemption ENCFF376CSR bigBed narrowPeak peaks ENCSR230PTV ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB2-human ENCAB543JMP DNA False 2016-12-19 ENCODE 1, 2 ENCFF621XGF 12826846 ENCODE Processing Pipeline d5e7b3a3a05b3026dd1ddc1901bf3cd3 https://www.encodeproject.org/files/ENCFF376CSR/@@download/ENCFF376CSR.bigBed hg19 released antibody characterized with exemption ENCFF593XRH bed narrowPeak conservative idr thresholded peaks ENCSR230PTV ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB2-human ENCAB543JMP DNA False 2016-12-19 ENCODE 1, 2 ENCFF001TDO, ENCFF537WGM, ENCFF551YGS, ENCFF621XGF 220690 ENCODE Processing Pipeline 7c6cc21b5ee378a78d4235595eaec02a https://www.encodeproject.org/files/ENCFF593XRH/@@download/ENCFF593XRH.bed.gz hg19 released antibody characterized with exemption ENCFF422VFY bigBed narrowPeak conservative idr thresholded peaks ENCSR230PTV ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB2-human ENCAB543JMP DNA False 2016-12-19 ENCODE 1, 2 ENCFF593XRH 517684 ENCODE Processing Pipeline 68f90647f15f0149e7928623455d5a72 https://www.encodeproject.org/files/ENCFF422VFY/@@download/ENCFF422VFY.bigBed hg19 released antibody characterized with exemption ENCFF561USY bed narrowPeak optimal idr thresholded peaks ENCSR230PTV ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB2-human ENCAB543JMP DNA False 2016-12-19 ENCODE 1, 2 ENCFF001TDO, ENCFF537WGM, ENCFF551YGS, ENCFF621XGF 336516 ENCODE Processing Pipeline 4c12ec35960c97bf65d22a7ac9ebd2cf https://www.encodeproject.org/files/ENCFF561USY/@@download/ENCFF561USY.bed.gz hg19 released antibody characterized with exemption ENCFF433FBK bigBed narrowPeak optimal idr thresholded peaks ENCSR230PTV ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB2-human ENCAB543JMP DNA False 2016-12-19 ENCODE 1, 2 ENCFF561USY 698573 ENCODE Processing Pipeline 5f0f85a51e24f245d19fd01eee717df4 https://www.encodeproject.org/files/ENCFF433FBK/@@download/ENCFF433FBK.bigBed hg19 released antibody characterized with exemption ENCFF793MDW bam unfiltered alignments ENCSR230PTV ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB2-human ENCAB543JMP DNA False 2016-12-19 ENCODE 1 100 ENCFF223BRR, ENCFF643CGH, ENCFF839NSQ 4175614962 ENCODE Processing Pipeline 5f817e69179afb6fc5d5cfa58a5d978c https://www.encodeproject.org/files/ENCFF793MDW/@@download/ENCFF793MDW.bam GRCh38 released antibody characterized with exemption ENCFF273SUG bam unfiltered alignments ENCSR230PTV ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB2-human ENCAB543JMP DNA False 2016-12-19 ENCODE 2 100 ENCFF643CGH, ENCFF796XXQ, ENCFF920GKJ 5232571305 ENCODE Processing Pipeline 5ac8366ee6f5c408c7edac4c02450ab5 https://www.encodeproject.org/files/ENCFF273SUG/@@download/ENCFF273SUG.bam GRCh38 released antibody characterized with exemption ENCFF555QMG bam alignments ENCSR230PTV ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB2-human ENCAB543JMP DNA False 2016-12-19 ENCODE 2 100 ENCFF643CGH, ENCFF796XXQ, ENCFF920GKJ 4525972530 ENCODE Processing Pipeline 81f93e3ac3f521dc6fbd4069b7a61346 https://www.encodeproject.org/files/ENCFF555QMG/@@download/ENCFF555QMG.bam GRCh38 released antibody characterized with exemption ENCFF273NVY bam alignments ENCSR230PTV ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB2-human ENCAB543JMP DNA False 2016-12-19 ENCODE 1 100 ENCFF223BRR, ENCFF643CGH, ENCFF839NSQ 3647879895 ENCODE Processing Pipeline 30fa0cb4e6046717b17f624bb0123c9f https://www.encodeproject.org/files/ENCFF273NVY/@@download/ENCFF273NVY.bam GRCh38 released antibody characterized with exemption ENCFF670QOX bigWig signal p-value ENCSR230PTV ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB2-human ENCAB543JMP DNA False 2016-12-19 ENCODE 1 ENCFF273NVY, ENCFF910IKB 1064265026 ENCODE Processing Pipeline 1a753d6a752167feeca037ef9268f4b8 https://www.encodeproject.org/files/ENCFF670QOX/@@download/ENCFF670QOX.bigWig GRCh38 released antibody characterized with exemption ENCFF194KOQ bigWig signal p-value ENCSR230PTV ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB2-human ENCAB543JMP DNA False 2016-12-19 ENCODE 2 ENCFF227IZS, ENCFF555QMG 1075635235 ENCODE Processing Pipeline 0e4f8e7f494331dfb2372a4a9b83b2a0 https://www.encodeproject.org/files/ENCFF194KOQ/@@download/ENCFF194KOQ.bigWig GRCh38 released antibody characterized with exemption ENCFF987FJS bigWig signal p-value ENCSR230PTV ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB2-human ENCAB543JMP DNA False 2016-12-19 ENCODE 1, 2 ENCFF227IZS, ENCFF273NVY, ENCFF555QMG, ENCFF910IKB 1984854748 ENCODE Processing Pipeline 985052deaa5678cfaa2c27f2b5739c41 https://www.encodeproject.org/files/ENCFF987FJS/@@download/ENCFF987FJS.bigWig GRCh38 released antibody characterized with exemption ENCFF618NDZ bigWig fold change over control ENCSR230PTV ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB2-human ENCAB543JMP DNA False 2016-12-19 ENCODE 1 ENCFF273NVY, ENCFF910IKB 1086869725 ENCODE Processing Pipeline a09e2c5c9c924b95300375e4889510c5 https://www.encodeproject.org/files/ENCFF618NDZ/@@download/ENCFF618NDZ.bigWig GRCh38 released antibody characterized with exemption ENCFF437SEY bigWig fold change over control ENCSR230PTV ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB2-human ENCAB543JMP DNA False 2016-12-19 ENCODE 2 ENCFF227IZS, ENCFF555QMG 1225344817 ENCODE Processing Pipeline 6de95922d2ff14ae02222f67d93e354d https://www.encodeproject.org/files/ENCFF437SEY/@@download/ENCFF437SEY.bigWig GRCh38 released antibody characterized with exemption ENCFF814JMY bigWig fold change over control ENCSR230PTV ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB2-human ENCAB543JMP DNA False 2016-12-19 ENCODE 1, 2 ENCFF227IZS, ENCFF273NVY, ENCFF555QMG, ENCFF910IKB 2096984217 ENCODE Processing Pipeline 268f3d4504a1b1700153873d6159e2f1 https://www.encodeproject.org/files/ENCFF814JMY/@@download/ENCFF814JMY.bigWig GRCh38 released antibody characterized with exemption ENCFF618DRP bed narrowPeak peaks ENCSR230PTV ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB2-human ENCAB543JMP DNA False 2016-12-19 ENCODE 1 ENCFF273NVY, ENCFF910IKB 6888374 ENCODE Processing Pipeline ce8a95ed684139b21139c0b38a0e0f5d https://www.encodeproject.org/files/ENCFF618DRP/@@download/ENCFF618DRP.bed.gz GRCh38 released antibody characterized with exemption ENCFF268RZL bed narrowPeak peaks ENCSR230PTV ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB2-human ENCAB543JMP DNA False 2016-12-19 ENCODE 2 ENCFF227IZS, ENCFF555QMG 6813366 ENCODE Processing Pipeline 3a99b4ad6655f1c1b6fa1080fcec3ccf https://www.encodeproject.org/files/ENCFF268RZL/@@download/ENCFF268RZL.bed.gz GRCh38 released antibody characterized with exemption ENCFF171VKW bed narrowPeak peaks ENCSR230PTV ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB2-human ENCAB543JMP DNA False 2016-12-19 ENCODE 1, 2 ENCFF227IZS, ENCFF273NVY, ENCFF555QMG, ENCFF910IKB 7233111 ENCODE Processing Pipeline 61140f9234c12a70e60a95d3d141c8a6 https://www.encodeproject.org/files/ENCFF171VKW/@@download/ENCFF171VKW.bed.gz GRCh38 released antibody characterized with exemption ENCFF371JKE bigBed narrowPeak peaks ENCSR230PTV ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB2-human ENCAB543JMP DNA False 2016-12-19 ENCODE 1 ENCFF618DRP 12915227 ENCODE Processing Pipeline 8d1bffe2a21de736cbfb5707ace95704 https://www.encodeproject.org/files/ENCFF371JKE/@@download/ENCFF371JKE.bigBed GRCh38 released antibody characterized with exemption ENCFF922VOG bigBed narrowPeak peaks ENCSR230PTV ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB2-human ENCAB543JMP DNA False 2016-12-19 ENCODE 2 ENCFF268RZL 13179959 ENCODE Processing Pipeline 0b8673c9c70edac34e5fdfe47b61ec3a https://www.encodeproject.org/files/ENCFF922VOG/@@download/ENCFF922VOG.bigBed GRCh38 released antibody characterized with exemption ENCFF146TVB bigBed narrowPeak peaks ENCSR230PTV ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB2-human ENCAB543JMP DNA False 2016-12-19 ENCODE 1, 2 ENCFF171VKW 12849903 ENCODE Processing Pipeline 95a97b6a9829f9add24c2389234e6e7e https://www.encodeproject.org/files/ENCFF146TVB/@@download/ENCFF146TVB.bigBed GRCh38 released antibody characterized with exemption ENCFF830BRF bed narrowPeak conservative idr thresholded peaks ENCSR230PTV ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB2-human ENCAB543JMP DNA False 2016-12-19 ENCODE 1, 2 ENCFF171VKW, ENCFF268RZL, ENCFF419RSJ, ENCFF618DRP 220384 ENCODE Processing Pipeline ed1d44e6a3a5c26d395631b73837c8f9 https://www.encodeproject.org/files/ENCFF830BRF/@@download/ENCFF830BRF.bed.gz GRCh38 released antibody characterized with exemption ENCFF250HMO bigBed narrowPeak conservative idr thresholded peaks ENCSR230PTV ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB2-human ENCAB543JMP DNA False 2016-12-19 ENCODE 1, 2 ENCFF830BRF 520653 ENCODE Processing Pipeline 3c266517b6c3b7966eb3f6af2d17948d https://www.encodeproject.org/files/ENCFF250HMO/@@download/ENCFF250HMO.bigBed GRCh38 released antibody characterized with exemption ENCFF189WAO bed narrowPeak optimal idr thresholded peaks ENCSR230PTV ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB2-human ENCAB543JMP DNA False 2016-12-19 ENCODE 1, 2 ENCFF171VKW, ENCFF268RZL, ENCFF419RSJ, ENCFF618DRP 338408 ENCODE Processing Pipeline 6068ae7bdb859eb8165ed7690cd60f4d https://www.encodeproject.org/files/ENCFF189WAO/@@download/ENCFF189WAO.bed.gz GRCh38 released antibody characterized with exemption ENCFF840FFA bigBed narrowPeak optimal idr thresholded peaks ENCSR230PTV ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB2-human ENCAB543JMP DNA False 2016-12-19 ENCODE 1, 2 ENCFF189WAO 705435 ENCODE Processing Pipeline 73c68f63a028a7a62c594a3f7cfc5c11 https://www.encodeproject.org/files/ENCFF840FFA/@@download/ENCFF840FFA.bigBed GRCh38 released antibody characterized with exemption ENCFF097JYZ fastq reads ENCSR264CZJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens THRA-human ENCAB669LID DNA False 2017-06-29 ENCODE 2 1 100 paired-ended 1 ENCFF499VMV 3457708186 Michael Snyder, Stanford 2a9be8af612e31e1df2d23cd0bce6e97 SRA:SRR6212992 https://www.encodeproject.org/files/ENCFF097JYZ/@@download/ENCFF097JYZ.fastq.gz Illumina HiSeq 4000 /files/ENCFF498JMO/ released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF499VMV fastq reads ENCSR264CZJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens THRA-human ENCAB669LID DNA False 2017-06-29 ENCODE 2 1 100 paired-ended 2 ENCFF097JYZ 3863793978 Michael Snyder, Stanford ab02f52b0613da9bccddcf151f39fb50 SRA:SRR6212992 https://www.encodeproject.org/files/ENCFF499VMV/@@download/ENCFF499VMV.fastq.gz Illumina HiSeq 4000 /files/ENCFF502GTS/ released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF695OJN fastq reads ENCSR264CZJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens THRA-human ENCAB669LID DNA False 2017-06-29 ENCODE 1 1 100 paired-ended 1 ENCFF405EAB 2486443155 Michael Snyder, Stanford fea3385615d02443cca8470a3ca9acc5 SRA:SRR6212993 https://www.encodeproject.org/files/ENCFF695OJN/@@download/ENCFF695OJN.fastq.gz Illumina HiSeq 4000 /files/ENCFF259GQA/ released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF405EAB fastq reads ENCSR264CZJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens THRA-human ENCAB669LID DNA False 2017-06-29 ENCODE 1 1 100 paired-ended 2 ENCFF695OJN 2655596914 Michael Snyder, Stanford 501ca1f9d4c5e0f6aa18c4076dc5a646 SRA:SRR6212993 https://www.encodeproject.org/files/ENCFF405EAB/@@download/ENCFF405EAB.fastq.gz Illumina HiSeq 4000 /files/ENCFF837MIV/ released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF471RJC bam unfiltered alignments ENCSR264CZJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens THRA-human ENCAB669LID DNA False 2017-06-29 ENCODE 1 100 ENCFF405EAB, ENCFF695OJN, ENCFF807MUK 4918810442 ENCODE Processing Pipeline b85d47ee06d829e2d42a30aca92171fd https://www.encodeproject.org/files/ENCFF471RJC/@@download/ENCFF471RJC.bam hg19 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF244GIS bam unfiltered alignments ENCSR264CZJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens THRA-human ENCAB669LID DNA False 2017-06-29 ENCODE 1 100 ENCFF405EAB, ENCFF643CGH, ENCFF695OJN 4922005922 ENCODE Processing Pipeline 44b04e564c05c28c80929032dda0332d https://www.encodeproject.org/files/ENCFF244GIS/@@download/ENCFF244GIS.bam GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF446AVI bam unfiltered alignments ENCSR264CZJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens THRA-human ENCAB669LID DNA False 2017-06-29 ENCODE 2 100 ENCFF097JYZ, ENCFF499VMV, ENCFF643CGH 6778132757 ENCODE Processing Pipeline c040f4776d76a068dad9fef69eb4f0fe https://www.encodeproject.org/files/ENCFF446AVI/@@download/ENCFF446AVI.bam GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF905ZPU bam unfiltered alignments ENCSR264CZJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens THRA-human ENCAB669LID DNA False 2017-06-29 ENCODE 2 100 ENCFF097JYZ, ENCFF499VMV, ENCFF807MUK 6774592933 ENCODE Processing Pipeline 7c0a40f4f6822354fbc499698910336d https://www.encodeproject.org/files/ENCFF905ZPU/@@download/ENCFF905ZPU.bam hg19 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF014SFP bam alignments ENCSR264CZJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens THRA-human ENCAB669LID DNA False 2017-06-29 ENCODE 1 100 ENCFF405EAB, ENCFF695OJN, ENCFF807MUK 2980516037 ENCODE Processing Pipeline 712d94deca661091728cc0788bd0f6a0 https://www.encodeproject.org/files/ENCFF014SFP/@@download/ENCFF014SFP.bam hg19 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF574EKT bam alignments ENCSR264CZJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens THRA-human ENCAB669LID DNA False 2017-06-29 ENCODE 1 100 ENCFF405EAB, ENCFF643CGH, ENCFF695OJN 2982228404 ENCODE Processing Pipeline 1bd0138d5b8006178c077c698d8d51ca https://www.encodeproject.org/files/ENCFF574EKT/@@download/ENCFF574EKT.bam GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF749BVC bam alignments ENCSR264CZJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens THRA-human ENCAB669LID DNA False 2017-06-29 ENCODE 2 100 ENCFF097JYZ, ENCFF499VMV, ENCFF643CGH 4431271918 ENCODE Processing Pipeline e52df2aeff5f064996c8e748dd05c8e3 https://www.encodeproject.org/files/ENCFF749BVC/@@download/ENCFF749BVC.bam GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF407LUN bam alignments ENCSR264CZJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens THRA-human ENCAB669LID DNA False 2017-06-29 ENCODE 2 100 ENCFF097JYZ, ENCFF499VMV, ENCFF807MUK 4427847708 ENCODE Processing Pipeline d306f46b0e1467cd3bd7a056ada8b4c3 https://www.encodeproject.org/files/ENCFF407LUN/@@download/ENCFF407LUN.bam hg19 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF126XXM bigWig signal p-value ENCSR264CZJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens THRA-human ENCAB669LID DNA False 2017-06-29 ENCODE 2 ENCFF160VXC, ENCFF407LUN 1357214973 ENCODE Processing Pipeline 34197e9cacd0517224526d70e1681d3f https://www.encodeproject.org/files/ENCFF126XXM/@@download/ENCFF126XXM.bigWig hg19 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF143NSU bigWig signal p-value ENCSR264CZJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens THRA-human ENCAB669LID DNA False 2017-06-29 ENCODE 1 ENCFF014SFP, ENCFF834TUP 935456269 ENCODE Processing Pipeline 7fc0b39dd45e21594343ab724027a7d4 https://www.encodeproject.org/files/ENCFF143NSU/@@download/ENCFF143NSU.bigWig hg19 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF233IJY bigWig signal p-value ENCSR264CZJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens THRA-human ENCAB669LID DNA False 2017-06-29 ENCODE 1, 2 ENCFF014SFP, ENCFF160VXC, ENCFF407LUN, ENCFF834TUP 1739237390 ENCODE Processing Pipeline 35534ab14b7d4d712a5463c129a8319b https://www.encodeproject.org/files/ENCFF233IJY/@@download/ENCFF233IJY.bigWig hg19 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF099FHV bigWig fold change over control ENCSR264CZJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens THRA-human ENCAB669LID DNA False 2017-06-29 ENCODE 1 ENCFF014SFP, ENCFF834TUP 1101135617 ENCODE Processing Pipeline 3bde8b64257fed3fd91d6b60c06bd68d https://www.encodeproject.org/files/ENCFF099FHV/@@download/ENCFF099FHV.bigWig hg19 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF476NOR bigWig fold change over control ENCSR264CZJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens THRA-human ENCAB669LID DNA False 2017-06-29 ENCODE 2 ENCFF160VXC, ENCFF407LUN 1443346661 ENCODE Processing Pipeline f8907802b47e0cdad165c50fcf0c0ffd https://www.encodeproject.org/files/ENCFF476NOR/@@download/ENCFF476NOR.bigWig hg19 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF635LIW bigWig fold change over control ENCSR264CZJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens THRA-human ENCAB669LID DNA False 2017-06-29 ENCODE 1, 2 ENCFF014SFP, ENCFF160VXC, ENCFF407LUN, ENCFF834TUP 2232978265 ENCODE Processing Pipeline 538e9d20045ae28bb833e62ef1c993ae https://www.encodeproject.org/files/ENCFF635LIW/@@download/ENCFF635LIW.bigWig hg19 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF714MAA bed narrowPeak peaks ENCSR264CZJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens THRA-human ENCAB669LID DNA False 2017-06-29 ENCODE 1 ENCFF014SFP, ENCFF834TUP 6450400 ENCODE Processing Pipeline c9b8e7a77956632bae4156d7541e7c46 https://www.encodeproject.org/files/ENCFF714MAA/@@download/ENCFF714MAA.bed.gz hg19 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF990DZB bed narrowPeak peaks ENCSR264CZJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens THRA-human ENCAB669LID DNA False 2017-06-29 ENCODE 2 ENCFF160VXC, ENCFF407LUN 6755474 ENCODE Processing Pipeline 47b3c1de68cdf273fd28f9de5cab4719 https://www.encodeproject.org/files/ENCFF990DZB/@@download/ENCFF990DZB.bed.gz hg19 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF698FIR bed narrowPeak peaks ENCSR264CZJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens THRA-human ENCAB669LID DNA False 2017-06-29 ENCODE 1, 2 ENCFF014SFP, ENCFF160VXC, ENCFF407LUN, ENCFF834TUP 7150857 ENCODE Processing Pipeline 3ad86d7030ce9d3b846e4ae8a20f65ca https://www.encodeproject.org/files/ENCFF698FIR/@@download/ENCFF698FIR.bed.gz hg19 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF757GIF bigBed narrowPeak peaks ENCSR264CZJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens THRA-human ENCAB669LID DNA False 2017-06-29 ENCODE 1 ENCFF714MAA 11053669 ENCODE Processing Pipeline 9ef7e7ec7ec6c6b37cc9028373d2f6d5 https://www.encodeproject.org/files/ENCFF757GIF/@@download/ENCFF757GIF.bigBed hg19 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF725UGV bigBed narrowPeak peaks ENCSR264CZJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens THRA-human ENCAB669LID DNA False 2017-06-29 ENCODE 2 ENCFF990DZB 11193511 ENCODE Processing Pipeline 0390efa92e5ca5550cf2c3194d4d88f8 https://www.encodeproject.org/files/ENCFF725UGV/@@download/ENCFF725UGV.bigBed hg19 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF831WPC bigBed narrowPeak peaks ENCSR264CZJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens THRA-human ENCAB669LID DNA False 2017-06-29 ENCODE 1, 2 ENCFF698FIR 10846732 ENCODE Processing Pipeline 964d1af6406c0d79121a7cc7f31fa24f https://www.encodeproject.org/files/ENCFF831WPC/@@download/ENCFF831WPC.bigBed hg19 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF752OUI bed narrowPeak conservative idr thresholded peaks ENCSR264CZJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens THRA-human ENCAB669LID DNA False 2017-06-29 ENCODE 1, 2 ENCFF001TDO, ENCFF698FIR, ENCFF714MAA, ENCFF990DZB 21283 ENCODE Processing Pipeline 599dc329ea7e29f64c6422ff1d2286ea https://www.encodeproject.org/files/ENCFF752OUI/@@download/ENCFF752OUI.bed.gz hg19 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF671BFH bed narrowPeak optimal idr thresholded peaks ENCSR264CZJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens THRA-human ENCAB669LID DNA False 2017-06-29 ENCODE 1, 2 ENCFF001TDO, ENCFF698FIR, ENCFF714MAA, ENCFF990DZB 34358 ENCODE Processing Pipeline c44172703df20404cda031ffc4f73a10 https://www.encodeproject.org/files/ENCFF671BFH/@@download/ENCFF671BFH.bed.gz hg19 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF498DMN bigBed narrowPeak conservative idr thresholded peaks ENCSR264CZJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens THRA-human ENCAB669LID DNA False 2017-06-29 ENCODE 1, 2 ENCFF752OUI 92131 ENCODE Processing Pipeline 2a3c8c9427a2ee7b65ce73c65680ba5c https://www.encodeproject.org/files/ENCFF498DMN/@@download/ENCFF498DMN.bigBed hg19 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF221ODZ bigBed narrowPeak optimal idr thresholded peaks ENCSR264CZJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens THRA-human ENCAB669LID DNA False 2017-06-29 ENCODE 1, 2 ENCFF671BFH 112560 ENCODE Processing Pipeline aa64680df029ec02be39329c650e41a6 https://www.encodeproject.org/files/ENCFF221ODZ/@@download/ENCFF221ODZ.bigBed hg19 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF802YZA bigWig signal p-value ENCSR264CZJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens THRA-human ENCAB669LID DNA False 2017-06-29 ENCODE 1 ENCFF574EKT 947680548 ENCODE Processing Pipeline 9cb13d4b85ac462c3414f153c4487cec https://www.encodeproject.org/files/ENCFF802YZA/@@download/ENCFF802YZA.bigWig GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF795MRC bigWig signal p-value ENCSR264CZJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens THRA-human ENCAB669LID DNA False 2017-06-29 ENCODE 2 ENCFF749BVC 1234505973 ENCODE Processing Pipeline f3da604e3dc7e6fa549568f43518d801 https://www.encodeproject.org/files/ENCFF795MRC/@@download/ENCFF795MRC.bigWig GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF708IDH bigWig signal p-value ENCSR264CZJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens THRA-human ENCAB669LID DNA False 2017-06-29 ENCODE 1, 2 ENCFF574EKT, ENCFF749BVC 1660572159 ENCODE Processing Pipeline 1fad79fa0595670e100b76f37aed56df https://www.encodeproject.org/files/ENCFF708IDH/@@download/ENCFF708IDH.bigWig GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF158LJD bigWig fold change over control ENCSR264CZJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens THRA-human ENCAB669LID DNA False 2017-06-29 ENCODE 1 ENCFF574EKT 1107288016 ENCODE Processing Pipeline 26a1538ad52a43973c68ba2ac9b30c6d https://www.encodeproject.org/files/ENCFF158LJD/@@download/ENCFF158LJD.bigWig GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF038GNL bigWig fold change over control ENCSR264CZJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens THRA-human ENCAB669LID DNA False 2017-06-29 ENCODE 2 ENCFF749BVC 1446306033 ENCODE Processing Pipeline 18e01b1c21caf0b38376e95c0cc8aada https://www.encodeproject.org/files/ENCFF038GNL/@@download/ENCFF038GNL.bigWig GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF887SKH bigWig fold change over control ENCSR264CZJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens THRA-human ENCAB669LID DNA False 2017-06-29 ENCODE 1, 2 ENCFF574EKT, ENCFF749BVC 2243797065 ENCODE Processing Pipeline 5fb8c68de2505f738362810996e0862a https://www.encodeproject.org/files/ENCFF887SKH/@@download/ENCFF887SKH.bigWig GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF352WFB bigBed narrowPeak peaks ENCSR264CZJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens THRA-human ENCAB669LID DNA False 2017-06-29 ENCODE 1, 2 ENCFF890OYV 10860864 ENCODE Processing Pipeline 78f02cb3c5249c0e1c480516542686bb https://www.encodeproject.org/files/ENCFF352WFB/@@download/ENCFF352WFB.bigBed GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF890OYV bed narrowPeak peaks ENCSR264CZJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens THRA-human ENCAB669LID DNA False 2017-06-29 ENCODE 1, 2 ENCFF574EKT, ENCFF749BVC 7127345 ENCODE Processing Pipeline 2109c39d8585fa38c80c2e653124d032 https://www.encodeproject.org/files/ENCFF890OYV/@@download/ENCFF890OYV.bed.gz GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF109WLT bigBed narrowPeak peaks ENCSR264CZJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens THRA-human ENCAB669LID DNA False 2017-06-29 ENCODE 1 ENCFF426KPY 11056714 ENCODE Processing Pipeline ff309774b6b81e56f434bca67eebae9f https://www.encodeproject.org/files/ENCFF109WLT/@@download/ENCFF109WLT.bigBed GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF426KPY bed narrowPeak peaks ENCSR264CZJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens THRA-human ENCAB669LID DNA False 2017-06-29 ENCODE 1 ENCFF574EKT 6336961 ENCODE Processing Pipeline 2e10ac50c9631caa441a32d8720910bb https://www.encodeproject.org/files/ENCFF426KPY/@@download/ENCFF426KPY.bed.gz GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF371YLX bed narrowPeak peaks ENCSR264CZJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens THRA-human ENCAB669LID DNA False 2017-06-29 ENCODE 2 ENCFF749BVC 6619117 ENCODE Processing Pipeline 2f8157687c8a81d9e4d1e0b0fa0e19be https://www.encodeproject.org/files/ENCFF371YLX/@@download/ENCFF371YLX.bed.gz GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF733CDM bigBed narrowPeak peaks ENCSR264CZJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens THRA-human ENCAB669LID DNA False 2017-06-29 ENCODE 2 ENCFF371YLX 11206969 ENCODE Processing Pipeline f4f356a640db25606f40b993ae2f2b8f https://www.encodeproject.org/files/ENCFF733CDM/@@download/ENCFF733CDM.bigBed GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF268KJK bigBed narrowPeak conservative idr thresholded peaks ENCSR264CZJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens THRA-human ENCAB669LID DNA False 2017-06-29 ENCODE 1, 2 ENCFF359ERT 93575 ENCODE Processing Pipeline ca8e429cb9dff74877d513de874bf3fa https://www.encodeproject.org/files/ENCFF268KJK/@@download/ENCFF268KJK.bigBed GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF048MMQ bigBed narrowPeak optimal idr thresholded peaks ENCSR264CZJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens THRA-human ENCAB669LID DNA False 2017-06-29 ENCODE 1, 2 ENCFF309DMZ 115394 ENCODE Processing Pipeline 1c10cecd9859dabd37d013d1a33ad0f6 https://www.encodeproject.org/files/ENCFF048MMQ/@@download/ENCFF048MMQ.bigBed GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF359ERT bed narrowPeak conservative idr thresholded peaks ENCSR264CZJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens THRA-human ENCAB669LID DNA False 2017-06-29 ENCODE 1, 2 ENCFF371YLX, ENCFF419RSJ, ENCFF426KPY, ENCFF890OYV 21270 ENCODE Processing Pipeline fbfc8f800ed2cf8dea52612c6098b4e5 https://www.encodeproject.org/files/ENCFF359ERT/@@download/ENCFF359ERT.bed.gz GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF309DMZ bed narrowPeak optimal idr thresholded peaks ENCSR264CZJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens THRA-human ENCAB669LID DNA False 2017-06-29 ENCODE 1, 2 ENCFF371YLX, ENCFF419RSJ, ENCFF426KPY, ENCFF890OYV 35340 ENCODE Processing Pipeline 5fdfd9eb0058a8399efabab7c738d564 https://www.encodeproject.org/files/ENCFF309DMZ/@@download/ENCFF309DMZ.bed.gz GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF214YCQ bam unfiltered alignments ENCSR201NQZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTBP1-human ENCAB000BAY DNA False 2016-11-17 ENCODE 2 100 ENCFF034WZZ, ENCFF350AMO, ENCFF807MUK 6485834921 ENCODE Processing Pipeline f3f682a8ff4f026034f693d5f39459fa https://www.encodeproject.org/files/ENCFF214YCQ/@@download/ENCFF214YCQ.bam hg19 released borderline replicate concordance ENCFF034WZZ fastq reads ENCSR201NQZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTBP1-human ENCAB000BAY DNA False 2016-11-17 ENCODE 2 1 100 paired-ended 1 ENCFF350AMO 3014580987 Michael Snyder, Stanford 199cf2598eeeecc1ad7d0ffc90986dd1 SRA:SRR6212675 https://www.encodeproject.org/files/ENCFF034WZZ/@@download/ENCFF034WZZ.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFD/ released borderline replicate concordance ENCFF903XDQ fastq reads ENCSR201NQZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTBP1-human ENCAB000BAY DNA False 2016-11-17 ENCODE 1 1 100 paired-ended 2 ENCFF092XAM 785297105 Michael Snyder, Stanford d393f2fcee0d1edb247fa6cbe318f88d https://www.encodeproject.org/files/ENCFF903XDQ/@@download/ENCFF903XDQ.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFH/ archived borderline replicate concordance ENCFF092XAM fastq reads ENCSR201NQZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTBP1-human ENCAB000BAY DNA False 2016-11-17 ENCODE 1 1 100 paired-ended 1 ENCFF903XDQ 764870176 Michael Snyder, Stanford 442271ceec69c51e576ba834727904f1 https://www.encodeproject.org/files/ENCFF092XAM/@@download/ENCFF092XAM.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFF/ archived borderline replicate concordance ENCFF350AMO fastq reads ENCSR201NQZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTBP1-human ENCAB000BAY DNA False 2016-11-17 ENCODE 2 1 100 paired-ended 2 ENCFF034WZZ 3001966243 Michael Snyder, Stanford ea631687971b3eee7aa578a4d36c700e SRA:SRR6212675 https://www.encodeproject.org/files/ENCFF350AMO/@@download/ENCFF350AMO.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFA/ released borderline replicate concordance ENCFF427JRM bam alignments ENCSR201NQZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTBP1-human ENCAB000BAY DNA False 2016-11-17 ENCODE 1 100 ENCFF092XAM, ENCFF807MUK, ENCFF903XDQ 1580802423 ENCODE Processing Pipeline 82bc77620b406b1916c6fb6aadfbae27 https://www.encodeproject.org/files/ENCFF427JRM/@@download/ENCFF427JRM.bam hg19 archived borderline replicate concordance ENCFF648UKL bam alignments ENCSR201NQZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTBP1-human ENCAB000BAY DNA False 2016-11-17 ENCODE 2 100 ENCFF034WZZ, ENCFF350AMO, ENCFF807MUK 5771070157 ENCODE Processing Pipeline ffa58bb0007d33052218511d7b051ccd https://www.encodeproject.org/files/ENCFF648UKL/@@download/ENCFF648UKL.bam hg19 released borderline replicate concordance ENCFF829YQD fastq reads ENCSR201NQZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTBP1-human ENCAB000BAY DNA False 2016-11-17 ENCODE 1 1 100 paired-ended 1 ENCFF077DIB 3553284188 Michael Snyder, Stanford 8f3d5e2a3005805148108228100d24cc SRA:SRR6212676 https://www.encodeproject.org/files/ENCFF829YQD/@@download/ENCFF829YQD.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFF/ released borderline replicate concordance ENCFF077DIB fastq reads ENCSR201NQZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTBP1-human ENCAB000BAY DNA False 2016-11-17 ENCODE 1 1 100 paired-ended 2 ENCFF829YQD 3609448390 Michael Snyder, Stanford 1cbaccd075c76af8d819aea8e97e8112 SRA:SRR6212676 https://www.encodeproject.org/files/ENCFF077DIB/@@download/ENCFF077DIB.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFH/ released borderline replicate concordance ENCFF576WJI bam unfiltered alignments ENCSR201NQZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTBP1-human ENCAB000BAY DNA False 2016-11-17 ENCODE 2 100 ENCFF034WZZ, ENCFF350AMO, ENCFF643CGH 6494220295 ENCODE Processing Pipeline 3c9ca5fea5345531d08d229a523954c6 https://www.encodeproject.org/files/ENCFF576WJI/@@download/ENCFF576WJI.bam GRCh38 released borderline replicate concordance ENCFF646WCS bam unfiltered alignments ENCSR201NQZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTBP1-human ENCAB000BAY DNA False 2016-11-17 ENCODE 1 100 ENCFF077DIB, ENCFF643CGH, ENCFF829YQD 6808346331 ENCODE Processing Pipeline cfd1e14687e9e1da5cc006df856753e6 https://www.encodeproject.org/files/ENCFF646WCS/@@download/ENCFF646WCS.bam GRCh38 released borderline replicate concordance ENCFF331BYU bam alignments ENCSR201NQZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTBP1-human ENCAB000BAY DNA False 2016-11-17 ENCODE 2 100 ENCFF034WZZ, ENCFF350AMO, ENCFF643CGH 5774061889 ENCODE Processing Pipeline 60c9eb8335f680547c61280cecd78650 https://www.encodeproject.org/files/ENCFF331BYU/@@download/ENCFF331BYU.bam GRCh38 released borderline replicate concordance ENCFF809OVE bam alignments ENCSR201NQZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTBP1-human ENCAB000BAY DNA False 2016-11-17 ENCODE 1 100 ENCFF077DIB, ENCFF643CGH, ENCFF829YQD 5628461768 ENCODE Processing Pipeline 54b624ada36b404c5e94dd48c12b505f https://www.encodeproject.org/files/ENCFF809OVE/@@download/ENCFF809OVE.bam GRCh38 released borderline replicate concordance ENCFF065GSL bigWig signal p-value ENCSR201NQZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTBP1-human ENCAB000BAY DNA False 2016-11-17 ENCODE 1 ENCFF809OVE, ENCFF910IKB 1449578822 ENCODE Processing Pipeline 4e372c6b06a1f0607f4dfb75ee31492c https://www.encodeproject.org/files/ENCFF065GSL/@@download/ENCFF065GSL.bigWig GRCh38 released borderline replicate concordance ENCFF018NJS bigWig signal p-value ENCSR201NQZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTBP1-human ENCAB000BAY DNA False 2016-11-17 ENCODE 2 ENCFF227IZS, ENCFF331BYU 1422721465 ENCODE Processing Pipeline ff402319c812a49b73aea9cc91ca06ed https://www.encodeproject.org/files/ENCFF018NJS/@@download/ENCFF018NJS.bigWig GRCh38 released borderline replicate concordance ENCFF881DTU bigWig fold change over control ENCSR201NQZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTBP1-human ENCAB000BAY DNA False 2016-11-17 ENCODE 1 ENCFF809OVE, ENCFF910IKB 1401515125 ENCODE Processing Pipeline 20df29e1f2864505509aa2e70b9ee001 https://www.encodeproject.org/files/ENCFF881DTU/@@download/ENCFF881DTU.bigWig GRCh38 released borderline replicate concordance ENCFF949FKG bigWig signal p-value ENCSR201NQZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTBP1-human ENCAB000BAY DNA False 2016-11-17 ENCODE 1, 2 ENCFF227IZS, ENCFF331BYU, ENCFF809OVE, ENCFF910IKB 1958476962 ENCODE Processing Pipeline e3e14239be95083b627f01835f60071c https://www.encodeproject.org/files/ENCFF949FKG/@@download/ENCFF949FKG.bigWig GRCh38 released borderline replicate concordance ENCFF709XMF bigWig fold change over control ENCSR201NQZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTBP1-human ENCAB000BAY DNA False 2016-11-17 ENCODE 2 ENCFF227IZS, ENCFF331BYU 1344235174 ENCODE Processing Pipeline 18eb6338af656066f6531a40d9aa4eba https://www.encodeproject.org/files/ENCFF709XMF/@@download/ENCFF709XMF.bigWig GRCh38 released borderline replicate concordance ENCFF888DFU bigWig fold change over control ENCSR201NQZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTBP1-human ENCAB000BAY DNA False 2016-11-17 ENCODE 1, 2 ENCFF227IZS, ENCFF331BYU, ENCFF809OVE, ENCFF910IKB 2381897516 ENCODE Processing Pipeline 60a37ba2d3ef7d77407bae5e61760595 https://www.encodeproject.org/files/ENCFF888DFU/@@download/ENCFF888DFU.bigWig GRCh38 released borderline replicate concordance ENCFF276SHQ bed narrowPeak peaks ENCSR201NQZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTBP1-human ENCAB000BAY DNA False 2016-11-17 ENCODE 1, 2 ENCFF227IZS, ENCFF331BYU, ENCFF809OVE, ENCFF910IKB 7268964 ENCODE Processing Pipeline 9daa06b3eedc42d8482e5902b26b0fe8 https://www.encodeproject.org/files/ENCFF276SHQ/@@download/ENCFF276SHQ.bed.gz GRCh38 released borderline replicate concordance ENCFF936EBH bed narrowPeak peaks ENCSR201NQZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTBP1-human ENCAB000BAY DNA False 2016-11-17 ENCODE 1 ENCFF809OVE, ENCFF910IKB 7101462 ENCODE Processing Pipeline c2b09a999f58d30b15932fa3c400984e https://www.encodeproject.org/files/ENCFF936EBH/@@download/ENCFF936EBH.bed.gz GRCh38 released borderline replicate concordance ENCFF099LLM bigBed narrowPeak peaks ENCSR201NQZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTBP1-human ENCAB000BAY DNA False 2016-11-17 ENCODE 1 ENCFF936EBH 12790351 ENCODE Processing Pipeline 447fe851b7a967afa2b1643c600e2ef6 https://www.encodeproject.org/files/ENCFF099LLM/@@download/ENCFF099LLM.bigBed GRCh38 released borderline replicate concordance ENCFF787GMQ bed narrowPeak peaks ENCSR201NQZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTBP1-human ENCAB000BAY DNA False 2016-11-17 ENCODE 2 ENCFF227IZS, ENCFF331BYU 6947125 ENCODE Processing Pipeline cf2058649f114e1a61ff58bfe03c3e57 https://www.encodeproject.org/files/ENCFF787GMQ/@@download/ENCFF787GMQ.bed.gz GRCh38 released borderline replicate concordance ENCFF337XES bigBed narrowPeak peaks ENCSR201NQZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTBP1-human ENCAB000BAY DNA False 2016-11-17 ENCODE 2 ENCFF787GMQ 13175928 ENCODE Processing Pipeline 3275647485f79b913b9b19cec31181c5 https://www.encodeproject.org/files/ENCFF337XES/@@download/ENCFF337XES.bigBed GRCh38 released borderline replicate concordance ENCFF429VZO bigBed narrowPeak optimal idr thresholded peaks ENCSR201NQZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTBP1-human ENCAB000BAY DNA False 2016-11-17 ENCODE 1, 2 ENCFF349UTF 1926191 ENCODE Processing Pipeline 2cbfcd0ff19cfa7cb6cee8c24a2bc802 https://www.encodeproject.org/files/ENCFF429VZO/@@download/ENCFF429VZO.bigBed GRCh38 released borderline replicate concordance ENCFF814WUH bigBed narrowPeak conservative idr thresholded peaks ENCSR201NQZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTBP1-human ENCAB000BAY DNA False 2016-11-17 ENCODE 1, 2 ENCFF805RSY 1455096 ENCODE Processing Pipeline 0ee496156a75284a28e6a905738be9a9 https://www.encodeproject.org/files/ENCFF814WUH/@@download/ENCFF814WUH.bigBed GRCh38 released borderline replicate concordance ENCFF411AZL bigBed narrowPeak peaks ENCSR201NQZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTBP1-human ENCAB000BAY DNA False 2016-11-17 ENCODE 1, 2 ENCFF276SHQ 12916297 ENCODE Processing Pipeline f9b71ac957ee7fdfe5c909a7e60067d8 https://www.encodeproject.org/files/ENCFF411AZL/@@download/ENCFF411AZL.bigBed GRCh38 released borderline replicate concordance ENCFF349UTF bed narrowPeak optimal idr thresholded peaks ENCSR201NQZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTBP1-human ENCAB000BAY DNA False 2016-11-17 ENCODE 1, 2 ENCFF276SHQ, ENCFF419RSJ, ENCFF787GMQ, ENCFF936EBH 901584 ENCODE Processing Pipeline c5363ca9e8b87de50a6c4b50c96790de https://www.encodeproject.org/files/ENCFF349UTF/@@download/ENCFF349UTF.bed.gz GRCh38 released borderline replicate concordance ENCFF805RSY bed narrowPeak conservative idr thresholded peaks ENCSR201NQZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTBP1-human ENCAB000BAY DNA False 2016-11-17 ENCODE 1, 2 ENCFF276SHQ, ENCFF419RSJ, ENCFF787GMQ, ENCFF936EBH 633216 ENCODE Processing Pipeline fbcbea3d75f1572267fad5a40dfd8b7e https://www.encodeproject.org/files/ENCFF805RSY/@@download/ENCFF805RSY.bed.gz GRCh38 released borderline replicate concordance ENCFF817WPX bigWig signal p-value ENCSR201NQZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTBP1-human ENCAB000BAY DNA False 2016-11-17 ENCODE 2 ENCFF051LWI, ENCFF648UKL 1414450681 ENCODE Processing Pipeline a752cdac81eb12f49c3549f70cd8bb99 https://www.encodeproject.org/files/ENCFF817WPX/@@download/ENCFF817WPX.bigWig hg19 released borderline replicate concordance ENCFF768WCJ bigWig fold change over control ENCSR201NQZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTBP1-human ENCAB000BAY DNA False 2016-11-17 ENCODE 2 ENCFF051LWI, ENCFF648UKL 1343213712 ENCODE Processing Pipeline 85816a02af1c44c6a7d4bc733a3b9c84 https://www.encodeproject.org/files/ENCFF768WCJ/@@download/ENCFF768WCJ.bigWig hg19 released borderline replicate concordance ENCFF924DEM bigBed narrowPeak peaks ENCSR201NQZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTBP1-human ENCAB000BAY DNA False 2016-11-17 ENCODE 2 ENCFF860LBQ 13157607 ENCODE Processing Pipeline a239f6753d162bd659e4db8beab2cf8f https://www.encodeproject.org/files/ENCFF924DEM/@@download/ENCFF924DEM.bigBed hg19 released borderline replicate concordance ENCFF808HEF bam alignments ENCSR201NQZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTBP1-human ENCAB000BAY DNA False 2016-11-17 ENCODE 1 100 ENCFF077DIB, ENCFF807MUK, ENCFF829YQD 5627213225 ENCODE Processing Pipeline c361910b4e5b23ba73b3c3fe2a59ccfb https://www.encodeproject.org/files/ENCFF808HEF/@@download/ENCFF808HEF.bam hg19 released borderline replicate concordance ENCFF424CUZ bam unfiltered alignments ENCSR201NQZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTBP1-human ENCAB000BAY DNA False 2016-11-17 ENCODE 1 100 ENCFF077DIB, ENCFF807MUK, ENCFF829YQD 6806215623 ENCODE Processing Pipeline a9ca34013841ee0ee65fe997dc402f92 https://www.encodeproject.org/files/ENCFF424CUZ/@@download/ENCFF424CUZ.bam hg19 released borderline replicate concordance ENCFF149BEM bigWig fold change over control ENCSR201NQZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTBP1-human ENCAB000BAY DNA False 2016-11-17 ENCODE 1 ENCFF581ZJL, ENCFF808HEF 1405955118 ENCODE Processing Pipeline 916bb858d299f566bec214d0a8d50dce https://www.encodeproject.org/files/ENCFF149BEM/@@download/ENCFF149BEM.bigWig hg19 released borderline replicate concordance ENCFF112LWM bigWig fold change over control ENCSR201NQZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTBP1-human ENCAB000BAY DNA False 2016-11-17 ENCODE 1, 2 ENCFF051LWI, ENCFF581ZJL, ENCFF648UKL, ENCFF808HEF 2363990264 ENCODE Processing Pipeline b0b0f38a6eb8bb6b92d7e7c64bd30bf3 https://www.encodeproject.org/files/ENCFF112LWM/@@download/ENCFF112LWM.bigWig hg19 released borderline replicate concordance ENCFF152VMJ bed narrowPeak optimal idr thresholded peaks ENCSR201NQZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTBP1-human ENCAB000BAY DNA False 2016-11-17 ENCODE 1, 2 ENCFF001TDO, ENCFF066ESG, ENCFF467AZP, ENCFF860LBQ 860855 ENCODE Processing Pipeline 43558d97b59309ab4ef82a6f8566b6ec https://www.encodeproject.org/files/ENCFF152VMJ/@@download/ENCFF152VMJ.bed.gz hg19 released borderline replicate concordance ENCFF574ZNK bigWig signal p-value ENCSR201NQZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTBP1-human ENCAB000BAY DNA False 2016-11-17 ENCODE 1 ENCFF581ZJL, ENCFF808HEF 1083874738 ENCODE Processing Pipeline 47d446b598b8148b937a8f793753ed4c https://www.encodeproject.org/files/ENCFF574ZNK/@@download/ENCFF574ZNK.bigWig hg19 released borderline replicate concordance ENCFF125XVE bed narrowPeak conservative idr thresholded peaks ENCSR201NQZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTBP1-human ENCAB000BAY DNA False 2016-11-17 ENCODE 1, 2 ENCFF001TDO, ENCFF066ESG, ENCFF467AZP, ENCFF860LBQ 611309 ENCODE Processing Pipeline 9f7e7af57837d5f8d66862f8b7cf3624 https://www.encodeproject.org/files/ENCFF125XVE/@@download/ENCFF125XVE.bed.gz hg19 released borderline replicate concordance ENCFF672KPX bigBed narrowPeak optimal idr thresholded peaks ENCSR201NQZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTBP1-human ENCAB000BAY DNA False 2016-11-17 ENCODE 1, 2 ENCFF152VMJ 1862128 ENCODE Processing Pipeline db0a2436a1ec11c70addbf68484bbc66 https://www.encodeproject.org/files/ENCFF672KPX/@@download/ENCFF672KPX.bigBed hg19 released borderline replicate concordance ENCFF061INZ bigWig signal p-value ENCSR201NQZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTBP1-human ENCAB000BAY DNA False 2016-11-17 ENCODE 1, 2 ENCFF051LWI, ENCFF581ZJL, ENCFF648UKL, ENCFF808HEF 1799211595 ENCODE Processing Pipeline 14553137d9f47295ab1a1e9bd5a47266 https://www.encodeproject.org/files/ENCFF061INZ/@@download/ENCFF061INZ.bigWig hg19 released borderline replicate concordance ENCFF066ESG bed narrowPeak peaks ENCSR201NQZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTBP1-human ENCAB000BAY DNA False 2016-11-17 ENCODE 1 ENCFF581ZJL, ENCFF808HEF 7153106 ENCODE Processing Pipeline bee251de2f81da98d55e8beebd9ee60d https://www.encodeproject.org/files/ENCFF066ESG/@@download/ENCFF066ESG.bed.gz hg19 released borderline replicate concordance ENCFF860LBQ bed narrowPeak peaks ENCSR201NQZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTBP1-human ENCAB000BAY DNA False 2016-11-17 ENCODE 2 ENCFF051LWI, ENCFF648UKL 6939738 ENCODE Processing Pipeline 2fa824b16ec57e89bc5dd1fd3a482e7e https://www.encodeproject.org/files/ENCFF860LBQ/@@download/ENCFF860LBQ.bed.gz hg19 released borderline replicate concordance ENCFF467AZP bed narrowPeak peaks ENCSR201NQZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTBP1-human ENCAB000BAY DNA False 2016-11-17 ENCODE 1, 2 ENCFF051LWI, ENCFF581ZJL, ENCFF648UKL, ENCFF808HEF 7191476 ENCODE Processing Pipeline a0296cabd69d272ea5f71439820c83d7 https://www.encodeproject.org/files/ENCFF467AZP/@@download/ENCFF467AZP.bed.gz hg19 released borderline replicate concordance ENCFF743MYW bigBed narrowPeak peaks ENCSR201NQZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTBP1-human ENCAB000BAY DNA False 2016-11-17 ENCODE 1 ENCFF066ESG 12845522 ENCODE Processing Pipeline 504f9ceb167752ace170b39c90cb2ea4 https://www.encodeproject.org/files/ENCFF743MYW/@@download/ENCFF743MYW.bigBed hg19 released borderline replicate concordance ENCFF422SRO bigBed narrowPeak peaks ENCSR201NQZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTBP1-human ENCAB000BAY DNA False 2016-11-17 ENCODE 1, 2 ENCFF467AZP 12816729 ENCODE Processing Pipeline 854c223a8e4499747064d581706df02e https://www.encodeproject.org/files/ENCFF422SRO/@@download/ENCFF422SRO.bigBed hg19 released borderline replicate concordance ENCFF870SFC bigBed narrowPeak conservative idr thresholded peaks ENCSR201NQZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTBP1-human ENCAB000BAY DNA False 2016-11-17 ENCODE 1, 2 ENCFF125XVE 1139295 ENCODE Processing Pipeline 7424d052a886d66a6126d673b94f2aaa https://www.encodeproject.org/files/ENCFF870SFC/@@download/ENCFF870SFC.bigBed hg19 released borderline replicate concordance ENCFF000YVJ bam alignments ENCSR000EGE ChIP-seq EFO:0002067 K562 cell line Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2012-05-14 ENCODE 1 1 605218283 Michael Snyder, Stanford addadd32a8951c750e714cb1d40d763b https://www.encodeproject.org/files/ENCFF000YVJ/@@download/ENCFF000YVJ.bam hg19 archived inconsistent target of control experiment, low read length biological replicates with identical biosample, missing derived_from ENCFF000YVK bam alignments ENCSR000EGE ChIP-seq EFO:0002067 K562 cell line Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2012-05-14 ENCODE 2 1 646964343 Michael Snyder, Stanford 13f480df68151362cf32b7c939432202 https://www.encodeproject.org/files/ENCFF000YVK/@@download/ENCFF000YVK.bam hg19 archived inconsistent target of control experiment, low read length biological replicates with identical biosample, missing derived_from ENCFF000YVL bigBed narrowPeak peaks ENCSR000EGE ChIP-seq EFO:0002067 K562 cell line Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2012-05-14 ENCODE ENCFF001VOC 3343510 Michael Snyder, Stanford aefb5b25d02c77a3740fd3ffcffbc6ca https://www.encodeproject.org/files/ENCFF000YVL/@@download/ENCFF000YVL.bigBed hg19 archived inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF000YVM fastq reads ENCSR000EGE ChIP-seq EFO:0002067 K562 cell line Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2012-05-14 ENCODE 1 1 36 single-ended 1182736223 Michael Snyder, Stanford f89d9080740f5a1332e0a6ab057f3156 https://www.encodeproject.org/files/ENCFF000YVM/@@download/ENCFF000YVM.fastq.gz Illumina Genome Analyzer /files/ENCFF000YRB/ released inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF000YVO fastq reads ENCSR000EGE ChIP-seq EFO:0002067 K562 cell line Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2012-05-14 ENCODE 2 1 36 single-ended 1197045033 Michael Snyder, Stanford 81f0b5314bd937de120c845dd3d04c1a https://www.encodeproject.org/files/ENCFF000YVO/@@download/ENCFF000YVO.fastq.gz Illumina Genome Analyzer /files/ENCFF000YRB/ released inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF000YVQ bigWig signal ENCSR000EGE ChIP-seq EFO:0002067 K562 cell line Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2012-05-14 ENCODE 437078843 Michael Snyder, Stanford 3d0cdd83b8e548279cf55542a900cbe7 https://www.encodeproject.org/files/ENCFF000YVQ/@@download/ENCFF000YVQ.bigWig hg19 archived inconsistent target of control experiment, low read length biological replicates with identical biosample, missing derived_from ENCFF001VOC bed narrowPeak peaks ENCSR000EGE ChIP-seq EFO:0002067 K562 cell line Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2012-05-14 ENCODE 1381827 Michael Snyder, Stanford 68ae1503a36a8e4e49d5435a7ef819da https://www.encodeproject.org/files/ENCFF001VOC/@@download/ENCFF001VOC.bed.gz hg19 archived inconsistent target of control experiment, low read length biological replicates with identical biosample, missing derived_from ENCFF002CXL bed narrowPeak optimal idr thresholded peaks ENCSR000EGE ChIP-seq EFO:0002067 K562 cell line Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2012-05-14 ENCODE 560754 ENCODE Consortium Analysis Working Group ec1717748eb321c02c89b809da728501 https://www.encodeproject.org/files/ENCFF002CXL/@@download/ENCFF002CXL.bed.gz hg19 archived inconsistent target of control experiment, low read length biological replicates with identical biosample, missing derived_from ENCFF204YXM bigBed narrowPeak optimal idr thresholded peaks ENCSR000EGE ChIP-seq EFO:0002067 K562 cell line Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2012-05-14 ENCODE ENCFF002CXL 1282719 ENCODE Consortium af4e70875e1913b5cc4d2ccb089e7ccf https://www.encodeproject.org/files/ENCFF204YXM/@@download/ENCFF204YXM.bigBed hg19 archived inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF883XER bam unfiltered alignments ENCSR000EGE ChIP-seq EFO:0002067 K562 cell line Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2012-05-14 ENCODE 1 36 ENCFF000YVM, ENCFF643CGH 1318883964 ENCODE Processing Pipeline 928d449ff0c41f217a743c60f619faff https://www.encodeproject.org/files/ENCFF883XER/@@download/ENCFF883XER.bam GRCh38 released inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF566CML bam unfiltered alignments ENCSR000EGE ChIP-seq EFO:0002067 K562 cell line Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2012-05-14 ENCODE 2 36 ENCFF000YVO, ENCFF643CGH 1340299504 ENCODE Processing Pipeline 0e30b6861bd62cc38a79daafdc4db5ec https://www.encodeproject.org/files/ENCFF566CML/@@download/ENCFF566CML.bam GRCh38 released inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF982AFE bam alignments ENCSR000EGE ChIP-seq EFO:0002067 K562 cell line Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2012-05-14 ENCODE 1 36 ENCFF000YVM, ENCFF643CGH 865139476 ENCODE Processing Pipeline b92010297ee9df3e31a12bfd1e32d50c https://www.encodeproject.org/files/ENCFF982AFE/@@download/ENCFF982AFE.bam GRCh38 released inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF200PYZ bam alignments ENCSR000EGE ChIP-seq EFO:0002067 K562 cell line Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2012-05-14 ENCODE 2 36 ENCFF000YVO, ENCFF643CGH 916814166 ENCODE Processing Pipeline 495eb0445f00c3aa9ff6c92ada8f2ad8 https://www.encodeproject.org/files/ENCFF200PYZ/@@download/ENCFF200PYZ.bam GRCh38 released inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF154BYS bam unfiltered alignments ENCSR000EGE ChIP-seq EFO:0002067 K562 cell line Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2012-05-14 ENCODE 1 36 ENCFF000YVM, ENCFF807MUK 1313567026 ENCODE Processing Pipeline f71941e05921b6abb0e63ec3713c3cee https://www.encodeproject.org/files/ENCFF154BYS/@@download/ENCFF154BYS.bam hg19 released inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF703ULA bam alignments ENCSR000EGE ChIP-seq EFO:0002067 K562 cell line Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2012-05-14 ENCODE 1 36 ENCFF000YVM, ENCFF807MUK 865762620 ENCODE Processing Pipeline 2856548563ffe53572132e104a6157f2 https://www.encodeproject.org/files/ENCFF703ULA/@@download/ENCFF703ULA.bam hg19 released inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF485ZPK bam unfiltered alignments ENCSR000EGE ChIP-seq EFO:0002067 K562 cell line Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2012-05-14 ENCODE 2 36 ENCFF000YVO, ENCFF807MUK 1335275178 ENCODE Processing Pipeline 024e6ac2926ab96f41b56877f32d6ddd https://www.encodeproject.org/files/ENCFF485ZPK/@@download/ENCFF485ZPK.bam hg19 released inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF366ROL bam alignments ENCSR000EGE ChIP-seq EFO:0002067 K562 cell line Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2012-05-14 ENCODE 2 36 ENCFF000YVO, ENCFF807MUK 917425721 ENCODE Processing Pipeline 70a2ce4bb716921a10e2ff2f29b96abc https://www.encodeproject.org/files/ENCFF366ROL/@@download/ENCFF366ROL.bam hg19 released inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF899LDN bigWig signal p-value ENCSR000EGE ChIP-seq EFO:0002067 K562 cell line Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2012-05-14 ENCODE 1 ENCFF023NGN, ENCFF982AFE 509242817 ENCODE Processing Pipeline 6ca76c163c9db07c3240ef4987a5e93e https://www.encodeproject.org/files/ENCFF899LDN/@@download/ENCFF899LDN.bigWig GRCh38 released inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF191VLU bigWig signal p-value ENCSR000EGE ChIP-seq EFO:0002067 K562 cell line Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2012-05-14 ENCODE 2 ENCFF023NGN, ENCFF200PYZ 485528264 ENCODE Processing Pipeline 313093201ab20f4e6d56f542c478ca0b https://www.encodeproject.org/files/ENCFF191VLU/@@download/ENCFF191VLU.bigWig GRCh38 released inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF363QJI bigWig signal p-value ENCSR000EGE ChIP-seq EFO:0002067 K562 cell line Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF023NGN, ENCFF200PYZ, ENCFF982AFE 538313516 ENCODE Processing Pipeline 5ecd7b8d3a58ebd5d27325cc5a4c602f https://www.encodeproject.org/files/ENCFF363QJI/@@download/ENCFF363QJI.bigWig GRCh38 released inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF856VEE bigWig fold change over control ENCSR000EGE ChIP-seq EFO:0002067 K562 cell line Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2012-05-14 ENCODE 2 ENCFF023NGN, ENCFF200PYZ 442334159 ENCODE Processing Pipeline 424d5a17aac67c19134bf6d2a8a6c1ca https://www.encodeproject.org/files/ENCFF856VEE/@@download/ENCFF856VEE.bigWig GRCh38 released inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF080ODW bigWig fold change over control ENCSR000EGE ChIP-seq EFO:0002067 K562 cell line Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2012-05-14 ENCODE 1 ENCFF023NGN, ENCFF982AFE 427289040 ENCODE Processing Pipeline 2ae5d6fb077b6201c3c30cec99014b1b https://www.encodeproject.org/files/ENCFF080ODW/@@download/ENCFF080ODW.bigWig GRCh38 released inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF907QZG bigWig fold change over control ENCSR000EGE ChIP-seq EFO:0002067 K562 cell line Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF023NGN, ENCFF200PYZ, ENCFF982AFE 725660239 ENCODE Processing Pipeline 56955c52d8bdd63d1f6c09cd5df3fda6 https://www.encodeproject.org/files/ENCFF907QZG/@@download/ENCFF907QZG.bigWig GRCh38 released inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF514SHW bed narrowPeak peaks ENCSR000EGE ChIP-seq EFO:0002067 K562 cell line Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2012-05-14 ENCODE 1 ENCFF023NGN, ENCFF982AFE 5253849 ENCODE Processing Pipeline fc4af747c1250ed6b3804674de683ec0 https://www.encodeproject.org/files/ENCFF514SHW/@@download/ENCFF514SHW.bed.gz GRCh38 released inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF765ZUN bed narrowPeak peaks ENCSR000EGE ChIP-seq EFO:0002067 K562 cell line Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2012-05-14 ENCODE 2 ENCFF023NGN, ENCFF200PYZ 5325781 ENCODE Processing Pipeline 341de4fe2c24b5814c5309b5e306bd39 https://www.encodeproject.org/files/ENCFF765ZUN/@@download/ENCFF765ZUN.bed.gz GRCh38 released inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF020TYZ bed narrowPeak peaks ENCSR000EGE ChIP-seq EFO:0002067 K562 cell line Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF023NGN, ENCFF200PYZ, ENCFF982AFE 4291534 ENCODE Processing Pipeline 70b534cb6cc0392779a70100627fa218 https://www.encodeproject.org/files/ENCFF020TYZ/@@download/ENCFF020TYZ.bed.gz GRCh38 released inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF843TBE bigBed narrowPeak peaks ENCSR000EGE ChIP-seq EFO:0002067 K562 cell line Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2012-05-14 ENCODE 1 ENCFF514SHW 11081858 ENCODE Processing Pipeline af4a010af41eca5dc453b239ba68d00a https://www.encodeproject.org/files/ENCFF843TBE/@@download/ENCFF843TBE.bigBed GRCh38 released inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF806FSL bigBed narrowPeak peaks ENCSR000EGE ChIP-seq EFO:0002067 K562 cell line Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2012-05-14 ENCODE 2 ENCFF765ZUN 11109018 ENCODE Processing Pipeline ca590d3b315cff9b37e51a5ba41cd82f https://www.encodeproject.org/files/ENCFF806FSL/@@download/ENCFF806FSL.bigBed GRCh38 released inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF603OSG bigBed narrowPeak conservative idr thresholded peaks ENCSR000EGE ChIP-seq EFO:0002067 K562 cell line Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF433PKW 902300 ENCODE Processing Pipeline 78e8bc834b8ad6f3930af083713aef28 https://www.encodeproject.org/files/ENCFF603OSG/@@download/ENCFF603OSG.bigBed GRCh38 released inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF860OBO bigBed narrowPeak optimal idr thresholded peaks ENCSR000EGE ChIP-seq EFO:0002067 K562 cell line Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF755HCK 1038160 ENCODE Processing Pipeline 76de2b0266e673e48763e87451852ef7 https://www.encodeproject.org/files/ENCFF860OBO/@@download/ENCFF860OBO.bigBed GRCh38 released inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF746AUS bigBed narrowPeak peaks ENCSR000EGE ChIP-seq EFO:0002067 K562 cell line Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF020TYZ 9188126 ENCODE Processing Pipeline 0d47a4dfd4e6369691c2f266082559fc https://www.encodeproject.org/files/ENCFF746AUS/@@download/ENCFF746AUS.bigBed GRCh38 released inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF433PKW bed narrowPeak conservative idr thresholded peaks ENCSR000EGE ChIP-seq EFO:0002067 K562 cell line Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF020TYZ, ENCFF419RSJ, ENCFF514SHW, ENCFF765ZUN 422586 ENCODE Processing Pipeline 1008d69a69a54bb582da6aab516adb4a https://www.encodeproject.org/files/ENCFF433PKW/@@download/ENCFF433PKW.bed.gz GRCh38 released inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF755HCK bed narrowPeak optimal idr thresholded peaks ENCSR000EGE ChIP-seq EFO:0002067 K562 cell line Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF020TYZ, ENCFF419RSJ, ENCFF514SHW, ENCFF765ZUN 507309 ENCODE Processing Pipeline 0f3d11026ed80414d813c56b0c574482 https://www.encodeproject.org/files/ENCFF755HCK/@@download/ENCFF755HCK.bed.gz GRCh38 released inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF328UVF bigWig signal p-value ENCSR000EGE ChIP-seq EFO:0002067 K562 cell line Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF366ROL, ENCFF703ULA, ENCFF710NTS 538791702 ENCODE Processing Pipeline f0fecc44a437b339bad95c3b9058bf90 https://www.encodeproject.org/files/ENCFF328UVF/@@download/ENCFF328UVF.bigWig hg19 released inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF152DJG bigWig fold change over control ENCSR000EGE ChIP-seq EFO:0002067 K562 cell line Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF366ROL, ENCFF703ULA, ENCFF710NTS 723001654 ENCODE Processing Pipeline 12dd8e9398ee78cca51e576e7138170a https://www.encodeproject.org/files/ENCFF152DJG/@@download/ENCFF152DJG.bigWig hg19 released inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF140XPK bed narrowPeak peaks ENCSR000EGE ChIP-seq EFO:0002067 K562 cell line Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2012-05-14 ENCODE 1 ENCFF703ULA, ENCFF710NTS 5254759 ENCODE Processing Pipeline 5da407a55ac8e67282768fa2dafa3448 https://www.encodeproject.org/files/ENCFF140XPK/@@download/ENCFF140XPK.bed.gz hg19 released inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF821GNB bed narrowPeak conservative idr thresholded peaks ENCSR000EGE ChIP-seq EFO:0002067 K562 cell line Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF001TDO, ENCFF140XPK, ENCFF379CMJ, ENCFF721DKV 421633 ENCODE Processing Pipeline 9addd43753ce0e434be8ead7742e5ba9 https://www.encodeproject.org/files/ENCFF821GNB/@@download/ENCFF821GNB.bed.gz hg19 released inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF379CMJ bed narrowPeak peaks ENCSR000EGE ChIP-seq EFO:0002067 K562 cell line Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF366ROL, ENCFF703ULA, ENCFF710NTS 4292138 ENCODE Processing Pipeline 79c4e391ee34962115e8162c8b45c989 https://www.encodeproject.org/files/ENCFF379CMJ/@@download/ENCFF379CMJ.bed.gz hg19 released inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF721DKV bed narrowPeak peaks ENCSR000EGE ChIP-seq EFO:0002067 K562 cell line Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2012-05-14 ENCODE 2 ENCFF366ROL, ENCFF710NTS 5331822 ENCODE Processing Pipeline 54d16af622c98713d139299498e6adb2 https://www.encodeproject.org/files/ENCFF721DKV/@@download/ENCFF721DKV.bed.gz hg19 released inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF691QLK bigWig fold change over control ENCSR000EGE ChIP-seq EFO:0002067 K562 cell line Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2012-05-14 ENCODE 1 ENCFF703ULA, ENCFF710NTS 426007592 ENCODE Processing Pipeline b1ead4f694adbdb7c85d224ef92ffdaf https://www.encodeproject.org/files/ENCFF691QLK/@@download/ENCFF691QLK.bigWig hg19 released inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF357GGL bigWig fold change over control ENCSR000EGE ChIP-seq EFO:0002067 K562 cell line Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2012-05-14 ENCODE 2 ENCFF366ROL, ENCFF710NTS 439247961 ENCODE Processing Pipeline a5102ebad6ff410f179787ce0776d362 https://www.encodeproject.org/files/ENCFF357GGL/@@download/ENCFF357GGL.bigWig hg19 released inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF549TYR bed narrowPeak optimal idr thresholded peaks ENCSR000EGE ChIP-seq EFO:0002067 K562 cell line Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF001TDO, ENCFF140XPK, ENCFF379CMJ, ENCFF721DKV 499007 ENCODE Processing Pipeline 5c12903e8565056220d8fa3f42c54529 https://www.encodeproject.org/files/ENCFF549TYR/@@download/ENCFF549TYR.bed.gz hg19 released inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF533LGP bigBed narrowPeak optimal idr thresholded peaks ENCSR000EGE ChIP-seq EFO:0002067 K562 cell line Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF549TYR 1025919 ENCODE Processing Pipeline 6bd334bfc5d6dda50cb418ffacaae90e https://www.encodeproject.org/files/ENCFF533LGP/@@download/ENCFF533LGP.bigBed hg19 released inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF036LXF bigWig signal p-value ENCSR000EGE ChIP-seq EFO:0002067 K562 cell line Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2012-05-14 ENCODE 1 ENCFF703ULA, ENCFF710NTS 468099946 ENCODE Processing Pipeline db218e76c042d728ccb4ec2793f82245 https://www.encodeproject.org/files/ENCFF036LXF/@@download/ENCFF036LXF.bigWig hg19 released inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF823OCS bigBed narrowPeak peaks ENCSR000EGE ChIP-seq EFO:0002067 K562 cell line Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2012-05-14 ENCODE 1 ENCFF140XPK 11073425 ENCODE Processing Pipeline 63e67e25791daa045ecc0594c47a1edb https://www.encodeproject.org/files/ENCFF823OCS/@@download/ENCFF823OCS.bigBed hg19 released inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF388BHA bigWig signal p-value ENCSR000EGE ChIP-seq EFO:0002067 K562 cell line Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2012-05-14 ENCODE 2 ENCFF366ROL, ENCFF710NTS 486366235 ENCODE Processing Pipeline 22fd1f38fe5f2d9df3765461fe51575f https://www.encodeproject.org/files/ENCFF388BHA/@@download/ENCFF388BHA.bigWig hg19 released inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF902GOP bigBed narrowPeak peaks ENCSR000EGE ChIP-seq EFO:0002067 K562 cell line Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF379CMJ 9185491 ENCODE Processing Pipeline 16f23858b1164c9a45572f3bd835fb17 https://www.encodeproject.org/files/ENCFF902GOP/@@download/ENCFF902GOP.bigBed hg19 released inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF715SBF bigBed narrowPeak peaks ENCSR000EGE ChIP-seq EFO:0002067 K562 cell line Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2012-05-14 ENCODE 2 ENCFF721DKV 11108767 ENCODE Processing Pipeline 4d89666e2b9435e6475909f4a1c15544 https://www.encodeproject.org/files/ENCFF715SBF/@@download/ENCFF715SBF.bigBed hg19 released inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF812KSD bigBed narrowPeak conservative idr thresholded peaks ENCSR000EGE ChIP-seq EFO:0002067 K562 cell line Homo sapiens EP300-human ENCAB000AJM DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF821GNB 900427 ENCODE Processing Pipeline 1881a085fc6946d4e9b58cbaef67b980 https://www.encodeproject.org/files/ENCFF812KSD/@@download/ENCFF812KSD.bigBed hg19 released inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF323VNN fastq reads ENCSR200JYP ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF316-human ENCAB362XEV DNA False 2017-02-03 ENCODE 2 1 100 paired-ended 2 ENCFF885ZFG 2051470517 Michael Snyder, Stanford 2a53780c8e7ac592099bd6cf5e801556 https://www.encodeproject.org/files/ENCFF323VNN/@@download/ENCFF323VNN.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFA/ archived borderline replicate concordance, inconsistent platforms, mild to moderate bottlenecking, moderate library complexity ENCFF890FRG fastq reads ENCSR200JYP ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF316-human ENCAB362XEV DNA False 2017-02-03 ENCODE 1 1 100 paired-ended 2 ENCFF121HAM 2511010664 Michael Snyder, Stanford 4fbd2e4e8be49508b46328cf96e28b4c SRA:SRR6212859 https://www.encodeproject.org/files/ENCFF890FRG/@@download/ENCFF890FRG.fastq.gz Illumina HiSeq 4000 /files/ENCFF502GTS/ released borderline replicate concordance, inconsistent platforms, mild to moderate bottlenecking, moderate library complexity ENCFF885ZFG fastq reads ENCSR200JYP ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF316-human ENCAB362XEV DNA False 2017-02-03 ENCODE 2 1 100 paired-ended 1 ENCFF323VNN 1952219817 Michael Snyder, Stanford 846deb0eb5447f4dab3456da8db5f20a https://www.encodeproject.org/files/ENCFF885ZFG/@@download/ENCFF885ZFG.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFD/ archived borderline replicate concordance, inconsistent platforms, mild to moderate bottlenecking, moderate library complexity ENCFF121HAM fastq reads ENCSR200JYP ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF316-human ENCAB362XEV DNA False 2017-02-03 ENCODE 1 1 100 paired-ended 1 ENCFF890FRG 2251644149 Michael Snyder, Stanford ec886a521b10fd56341039d81ca137b3 SRA:SRR6212859 https://www.encodeproject.org/files/ENCFF121HAM/@@download/ENCFF121HAM.fastq.gz Illumina HiSeq 4000 /files/ENCFF498JMO/ released borderline replicate concordance, inconsistent platforms, mild to moderate bottlenecking, moderate library complexity ENCFF308CZX fastq reads ENCSR200JYP ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF316-human ENCAB362XEV DNA False 2017-02-03 ENCODE 2 1 100 paired-ended 1 ENCFF786NXV 5060250003 Michael Snyder, Stanford cf605dca633ffef4a0d938ccc6eecb5a SRA:SRR6212858 https://www.encodeproject.org/files/ENCFF308CZX/@@download/ENCFF308CZX.fastq.gz Illumina HiSeq 4000 /files/ENCFF259GQA/ released borderline replicate concordance, inconsistent platforms, mild to moderate bottlenecking, moderate library complexity ENCFF786NXV fastq reads ENCSR200JYP ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF316-human ENCAB362XEV DNA False 2017-02-03 ENCODE 2 1 100 paired-ended 2 ENCFF308CZX 5806759110 Michael Snyder, Stanford 1e6c0430b58716d689cfae59270dad1f SRA:SRR6212858 https://www.encodeproject.org/files/ENCFF786NXV/@@download/ENCFF786NXV.fastq.gz Illumina HiSeq 4000 /files/ENCFF837MIV/ released borderline replicate concordance, inconsistent platforms, mild to moderate bottlenecking, moderate library complexity ENCFF480PKB bam unfiltered alignments ENCSR200JYP ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF316-human ENCAB362XEV DNA False 2017-02-03 ENCODE 1 100 ENCFF121HAM, ENCFF643CGH, ENCFF890FRG 4653106349 ENCODE Processing Pipeline 27f1e92c456d609fb3e9823008763755 https://www.encodeproject.org/files/ENCFF480PKB/@@download/ENCFF480PKB.bam GRCh38 released borderline replicate concordance, inconsistent platforms, mild to moderate bottlenecking, moderate library complexity ENCFF303ICH bam alignments ENCSR200JYP ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF316-human ENCAB362XEV DNA False 2017-02-03 ENCODE 1 100 ENCFF121HAM, ENCFF643CGH, ENCFF890FRG 3261635285 ENCODE Processing Pipeline fc0a6acf42e743fe899246a015e5b42a https://www.encodeproject.org/files/ENCFF303ICH/@@download/ENCFF303ICH.bam GRCh38 released borderline replicate concordance, inconsistent platforms, mild to moderate bottlenecking, moderate library complexity ENCFF611FON bam unfiltered alignments ENCSR200JYP ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF316-human ENCAB362XEV DNA False 2017-02-03 ENCODE 2 100 ENCFF308CZX, ENCFF643CGH, ENCFF786NXV 9824605267 ENCODE Processing Pipeline 268c344cf9855350f1af9807c5fc73c3 https://www.encodeproject.org/files/ENCFF611FON/@@download/ENCFF611FON.bam GRCh38 released borderline replicate concordance, inconsistent platforms, mild to moderate bottlenecking, moderate library complexity ENCFF041ZVD bam alignments ENCSR200JYP ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF316-human ENCAB362XEV DNA False 2017-02-03 ENCODE 2 100 ENCFF308CZX, ENCFF643CGH, ENCFF786NXV 5821059847 ENCODE Processing Pipeline 974920a13b6d0f209b21a1e326edbb5b https://www.encodeproject.org/files/ENCFF041ZVD/@@download/ENCFF041ZVD.bam GRCh38 released borderline replicate concordance, inconsistent platforms, mild to moderate bottlenecking, moderate library complexity ENCFF404KVW bigWig signal p-value ENCSR200JYP ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF316-human ENCAB362XEV DNA False 2017-02-03 ENCODE 2 ENCFF041ZVD, ENCFF712WXB, ENCFF790TAN 2056627105 ENCODE Processing Pipeline e7048028622cf93aab294631ea74c4a1 https://www.encodeproject.org/files/ENCFF404KVW/@@download/ENCFF404KVW.bigWig GRCh38 released borderline replicate concordance, inconsistent platforms, mild to moderate bottlenecking, moderate library complexity ENCFF234MUB bigWig signal p-value ENCSR200JYP ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF316-human ENCAB362XEV DNA False 2017-02-03 ENCODE 1 ENCFF303ICH, ENCFF790TAN 1115751982 ENCODE Processing Pipeline 1ef5718f8688266f5fc70b96849af7cf https://www.encodeproject.org/files/ENCFF234MUB/@@download/ENCFF234MUB.bigWig GRCh38 released borderline replicate concordance, inconsistent platforms, mild to moderate bottlenecking, moderate library complexity ENCFF941EFJ bigWig signal p-value ENCSR200JYP ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF316-human ENCAB362XEV DNA False 2017-02-03 ENCODE 1, 2 ENCFF041ZVD, ENCFF303ICH, ENCFF712WXB, ENCFF790TAN 2252991471 ENCODE Processing Pipeline 41a917d529368fdb006fad91c79c5716 https://www.encodeproject.org/files/ENCFF941EFJ/@@download/ENCFF941EFJ.bigWig GRCh38 released borderline replicate concordance, inconsistent platforms, mild to moderate bottlenecking, moderate library complexity ENCFF417OVB bigWig fold change over control ENCSR200JYP ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF316-human ENCAB362XEV DNA False 2017-02-03 ENCODE 1 ENCFF303ICH, ENCFF790TAN 1164607093 ENCODE Processing Pipeline 2419c0bf4352cfb32c085db4163925ea https://www.encodeproject.org/files/ENCFF417OVB/@@download/ENCFF417OVB.bigWig GRCh38 released borderline replicate concordance, inconsistent platforms, mild to moderate bottlenecking, moderate library complexity ENCFF353KBC bigWig fold change over control ENCSR200JYP ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF316-human ENCAB362XEV DNA False 2017-02-03 ENCODE 2 ENCFF041ZVD, ENCFF712WXB, ENCFF790TAN 2107335303 ENCODE Processing Pipeline 2209af47c4ff95d55406eb524862065e https://www.encodeproject.org/files/ENCFF353KBC/@@download/ENCFF353KBC.bigWig GRCh38 released borderline replicate concordance, inconsistent platforms, mild to moderate bottlenecking, moderate library complexity ENCFF404USP bigWig fold change over control ENCSR200JYP ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF316-human ENCAB362XEV DNA False 2017-02-03 ENCODE 1, 2 ENCFF041ZVD, ENCFF303ICH, ENCFF712WXB, ENCFF790TAN 2442864008 ENCODE Processing Pipeline 1b5168e28daeaee8eed193f351863ed1 https://www.encodeproject.org/files/ENCFF404USP/@@download/ENCFF404USP.bigWig GRCh38 released borderline replicate concordance, inconsistent platforms, mild to moderate bottlenecking, moderate library complexity ENCFF736FJB bed narrowPeak peaks ENCSR200JYP ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF316-human ENCAB362XEV DNA False 2017-02-03 ENCODE 1 ENCFF303ICH, ENCFF790TAN 6433481 ENCODE Processing Pipeline 2ca863a87d807fbd9e97da4974aad0d3 https://www.encodeproject.org/files/ENCFF736FJB/@@download/ENCFF736FJB.bed.gz GRCh38 released borderline replicate concordance, inconsistent platforms, mild to moderate bottlenecking, moderate library complexity ENCFF474QPI bed narrowPeak peaks ENCSR200JYP ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF316-human ENCAB362XEV DNA False 2017-02-03 ENCODE 2 ENCFF041ZVD, ENCFF712WXB, ENCFF790TAN 7213523 ENCODE Processing Pipeline 7b0594e4834f351cf66ad388685b2009 https://www.encodeproject.org/files/ENCFF474QPI/@@download/ENCFF474QPI.bed.gz GRCh38 released borderline replicate concordance, inconsistent platforms, mild to moderate bottlenecking, moderate library complexity ENCFF526QZM bed narrowPeak peaks ENCSR200JYP ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF316-human ENCAB362XEV DNA False 2017-02-03 ENCODE 1, 2 ENCFF041ZVD, ENCFF303ICH, ENCFF712WXB, ENCFF790TAN 7253737 ENCODE Processing Pipeline 8c31af33e79e54eecf1ba0ea1a5120eb https://www.encodeproject.org/files/ENCFF526QZM/@@download/ENCFF526QZM.bed.gz GRCh38 released borderline replicate concordance, inconsistent platforms, mild to moderate bottlenecking, moderate library complexity ENCFF432JDG bigBed narrowPeak peaks ENCSR200JYP ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF316-human ENCAB362XEV DNA False 2017-02-03 ENCODE 1 ENCFF736FJB 11016885 ENCODE Processing Pipeline c88d860be0d33b056f4d7c3d51a1faf0 https://www.encodeproject.org/files/ENCFF432JDG/@@download/ENCFF432JDG.bigBed GRCh38 released borderline replicate concordance, inconsistent platforms, mild to moderate bottlenecking, moderate library complexity ENCFF004DGN bigBed narrowPeak peaks ENCSR200JYP ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF316-human ENCAB362XEV DNA False 2017-02-03 ENCODE 2 ENCFF474QPI 13357750 ENCODE Processing Pipeline ae5bd09105089742ddf3a92dbbfa2882 https://www.encodeproject.org/files/ENCFF004DGN/@@download/ENCFF004DGN.bigBed GRCh38 released borderline replicate concordance, inconsistent platforms, mild to moderate bottlenecking, moderate library complexity ENCFF866XJL bigBed narrowPeak peaks ENCSR200JYP ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF316-human ENCAB362XEV DNA False 2017-02-03 ENCODE 1, 2 ENCFF526QZM 13319303 ENCODE Processing Pipeline e9df9995ef35f9fbc7df1bb72aa6226f https://www.encodeproject.org/files/ENCFF866XJL/@@download/ENCFF866XJL.bigBed GRCh38 released borderline replicate concordance, inconsistent platforms, mild to moderate bottlenecking, moderate library complexity ENCFF164NRV bigBed narrowPeak conservative idr thresholded peaks ENCSR200JYP ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF316-human ENCAB362XEV DNA False 2017-02-03 ENCODE 1, 2 ENCFF647FMI 507705 ENCODE Processing Pipeline a4563b87fd4a8e7e895baa38d14780e4 https://www.encodeproject.org/files/ENCFF164NRV/@@download/ENCFF164NRV.bigBed GRCh38 released borderline replicate concordance, inconsistent platforms, mild to moderate bottlenecking, moderate library complexity ENCFF056SEM bed narrowPeak optimal idr thresholded peaks ENCSR200JYP ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF316-human ENCAB362XEV DNA False 2017-02-03 ENCODE 1, 2 ENCFF419RSJ, ENCFF474QPI, ENCFF526QZM, ENCFF736FJB 354148 ENCODE Processing Pipeline fe638884c76bb59409ba977becdde421 https://www.encodeproject.org/files/ENCFF056SEM/@@download/ENCFF056SEM.bed.gz GRCh38 released borderline replicate concordance, inconsistent platforms, mild to moderate bottlenecking, moderate library complexity ENCFF647FMI bed narrowPeak conservative idr thresholded peaks ENCSR200JYP ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF316-human ENCAB362XEV DNA False 2017-02-03 ENCODE 1, 2 ENCFF419RSJ, ENCFF474QPI, ENCFF526QZM, ENCFF736FJB 245187 ENCODE Processing Pipeline 9ccf94bf33c47c7a7ed30f886253b7dd https://www.encodeproject.org/files/ENCFF647FMI/@@download/ENCFF647FMI.bed.gz GRCh38 released borderline replicate concordance, inconsistent platforms, mild to moderate bottlenecking, moderate library complexity ENCFF051THH bigBed narrowPeak optimal idr thresholded peaks ENCSR200JYP ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF316-human ENCAB362XEV DNA False 2017-02-03 ENCODE 1, 2 ENCFF056SEM 660258 ENCODE Processing Pipeline a5ada372da452d80fdb170c06912cfe7 https://www.encodeproject.org/files/ENCFF051THH/@@download/ENCFF051THH.bigBed GRCh38 released borderline replicate concordance, inconsistent platforms, mild to moderate bottlenecking, moderate library complexity ENCFF528PQL bam unfiltered alignments ENCSR200JYP ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF316-human ENCAB362XEV DNA False 2017-02-03 ENCODE 1 100 ENCFF121HAM, ENCFF807MUK, ENCFF890FRG 4647545962 ENCODE Processing Pipeline eb5ca8f2287ce63cabc18d8f8dc6dc0e https://www.encodeproject.org/files/ENCFF528PQL/@@download/ENCFF528PQL.bam hg19 released borderline replicate concordance, inconsistent platforms, mild to moderate bottlenecking, moderate library complexity ENCFF775NNT bam alignments ENCSR200JYP ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF316-human ENCAB362XEV DNA False 2017-02-03 ENCODE 1 100 ENCFF121HAM, ENCFF807MUK, ENCFF890FRG 3258855889 ENCODE Processing Pipeline 58e69a2e66b3aec2628895f6625c7d5d https://www.encodeproject.org/files/ENCFF775NNT/@@download/ENCFF775NNT.bam hg19 released borderline replicate concordance, inconsistent platforms, mild to moderate bottlenecking, moderate library complexity ENCFF824KYH bam unfiltered alignments ENCSR200JYP ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF316-human ENCAB362XEV DNA False 2017-02-03 ENCODE 2 100 ENCFF308CZX, ENCFF786NXV, ENCFF807MUK 9824167823 ENCODE Processing Pipeline 1838bd6347aa9971b65c33c7ded74b26 https://www.encodeproject.org/files/ENCFF824KYH/@@download/ENCFF824KYH.bam hg19 released borderline replicate concordance, inconsistent platforms, mild to moderate bottlenecking, moderate library complexity ENCFF006RYF bam alignments ENCSR200JYP ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF316-human ENCAB362XEV DNA False 2017-02-03 ENCODE 2 100 ENCFF308CZX, ENCFF786NXV, ENCFF807MUK 5814668806 ENCODE Processing Pipeline 3da2d7fa815de7dc0c7c46e2ad4f53ec https://www.encodeproject.org/files/ENCFF006RYF/@@download/ENCFF006RYF.bam hg19 released borderline replicate concordance, inconsistent platforms, mild to moderate bottlenecking, moderate library complexity ENCFF169JAV bigWig signal p-value ENCSR200JYP ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF316-human ENCAB362XEV DNA False 2017-02-03 ENCODE 1 ENCFF160VXC, ENCFF775NNT 943128994 ENCODE Processing Pipeline c9a4ce0348bba6fb352709185b929e7b https://www.encodeproject.org/files/ENCFF169JAV/@@download/ENCFF169JAV.bigWig hg19 released borderline replicate concordance, inconsistent platforms, mild to moderate bottlenecking, moderate library complexity ENCFF094TXE bigWig signal p-value ENCSR200JYP ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF316-human ENCAB362XEV DNA False 2017-02-03 ENCODE 1, 2 ENCFF006RYF, ENCFF160VXC, ENCFF775NNT, ENCFF834TUP 1817204106 ENCODE Processing Pipeline d9705d26e18e6c8317584fb8de866dc5 https://www.encodeproject.org/files/ENCFF094TXE/@@download/ENCFF094TXE.bigWig hg19 released borderline replicate concordance, inconsistent platforms, mild to moderate bottlenecking, moderate library complexity ENCFF410ZSL bigWig fold change over control ENCSR200JYP ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF316-human ENCAB362XEV DNA False 2017-02-03 ENCODE 2 ENCFF006RYF, ENCFF160VXC, ENCFF834TUP 2088792273 ENCODE Processing Pipeline c227f6901d3114b64604543ecf5dab42 https://www.encodeproject.org/files/ENCFF410ZSL/@@download/ENCFF410ZSL.bigWig hg19 released borderline replicate concordance, inconsistent platforms, mild to moderate bottlenecking, moderate library complexity ENCFF165WIL bigWig fold change over control ENCSR200JYP ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF316-human ENCAB362XEV DNA False 2017-02-03 ENCODE 1 ENCFF160VXC, ENCFF775NNT 1205572010 ENCODE Processing Pipeline 8bfba05b3f8a80e2b4d4d333b636821a https://www.encodeproject.org/files/ENCFF165WIL/@@download/ENCFF165WIL.bigWig hg19 released borderline replicate concordance, inconsistent platforms, mild to moderate bottlenecking, moderate library complexity ENCFF621GAB bigWig signal p-value ENCSR200JYP ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF316-human ENCAB362XEV DNA False 2017-02-03 ENCODE 2 ENCFF006RYF, ENCFF160VXC, ENCFF834TUP 1775378685 ENCODE Processing Pipeline b5c8d0dc24bc8bb6f4e03b8547a761de https://www.encodeproject.org/files/ENCFF621GAB/@@download/ENCFF621GAB.bigWig hg19 released borderline replicate concordance, inconsistent platforms, mild to moderate bottlenecking, moderate library complexity ENCFF849RXO bigWig fold change over control ENCSR200JYP ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF316-human ENCAB362XEV DNA False 2017-02-03 ENCODE 1, 2 ENCFF006RYF, ENCFF160VXC, ENCFF775NNT, ENCFF834TUP 2427847870 ENCODE Processing Pipeline 4a441ce2cad56d895698610e3c9e56ca https://www.encodeproject.org/files/ENCFF849RXO/@@download/ENCFF849RXO.bigWig hg19 released borderline replicate concordance, inconsistent platforms, mild to moderate bottlenecking, moderate library complexity ENCFF098CHB bed narrowPeak conservative idr thresholded peaks ENCSR200JYP ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF316-human ENCAB362XEV DNA False 2017-02-03 ENCODE 1, 2 ENCFF001TDO, ENCFF488HLT, ENCFF802QKE, ENCFF885FEE 249662 ENCODE Processing Pipeline 32f38829bbb74b6c543124dc7940b1b9 https://www.encodeproject.org/files/ENCFF098CHB/@@download/ENCFF098CHB.bed.gz hg19 released borderline replicate concordance, inconsistent platforms, mild to moderate bottlenecking, moderate library complexity ENCFF778NEV bigBed narrowPeak conservative idr thresholded peaks ENCSR200JYP ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF316-human ENCAB362XEV DNA False 2017-02-03 ENCODE 1, 2 ENCFF098CHB 511401 ENCODE Processing Pipeline a1bc2eea7110543fb1fe77ba3ce39d0e https://www.encodeproject.org/files/ENCFF778NEV/@@download/ENCFF778NEV.bigBed hg19 released borderline replicate concordance, inconsistent platforms, mild to moderate bottlenecking, moderate library complexity ENCFF442ZUF bed narrowPeak optimal idr thresholded peaks ENCSR200JYP ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF316-human ENCAB362XEV DNA False 2017-02-03 ENCODE 1, 2 ENCFF001TDO, ENCFF488HLT, ENCFF802QKE, ENCFF885FEE 351602 ENCODE Processing Pipeline 1fc04f16ea66c9af37a0b919f6ec5ebc https://www.encodeproject.org/files/ENCFF442ZUF/@@download/ENCFF442ZUF.bed.gz hg19 released borderline replicate concordance, inconsistent platforms, mild to moderate bottlenecking, moderate library complexity ENCFF883CUH bigBed narrowPeak optimal idr thresholded peaks ENCSR200JYP ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF316-human ENCAB362XEV DNA False 2017-02-03 ENCODE 1, 2 ENCFF442ZUF 653759 ENCODE Processing Pipeline ec19b3d06a6fa05c5fb6873abb557c3d https://www.encodeproject.org/files/ENCFF883CUH/@@download/ENCFF883CUH.bigBed hg19 released borderline replicate concordance, inconsistent platforms, mild to moderate bottlenecking, moderate library complexity ENCFF274YKX bigBed narrowPeak peaks ENCSR200JYP ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF316-human ENCAB362XEV DNA False 2017-02-03 ENCODE 2 ENCFF802QKE 13371966 ENCODE Processing Pipeline 02fe7ce4804790eb8f89573981da2f30 https://www.encodeproject.org/files/ENCFF274YKX/@@download/ENCFF274YKX.bigBed hg19 released borderline replicate concordance, inconsistent platforms, mild to moderate bottlenecking, moderate library complexity ENCFF488HLT bed narrowPeak peaks ENCSR200JYP ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF316-human ENCAB362XEV DNA False 2017-02-03 ENCODE 1 ENCFF160VXC, ENCFF775NNT 6425855 ENCODE Processing Pipeline a3be0c0dbff51a7c107cd61844718d65 https://www.encodeproject.org/files/ENCFF488HLT/@@download/ENCFF488HLT.bed.gz hg19 released borderline replicate concordance, inconsistent platforms, mild to moderate bottlenecking, moderate library complexity ENCFF885FEE bed narrowPeak peaks ENCSR200JYP ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF316-human ENCAB362XEV DNA False 2017-02-03 ENCODE 1, 2 ENCFF006RYF, ENCFF160VXC, ENCFF775NNT, ENCFF834TUP 7262615 ENCODE Processing Pipeline 9bb34a953d7821d9ed2340e5cdb44c03 https://www.encodeproject.org/files/ENCFF885FEE/@@download/ENCFF885FEE.bed.gz hg19 released borderline replicate concordance, inconsistent platforms, mild to moderate bottlenecking, moderate library complexity ENCFF802QKE bed narrowPeak peaks ENCSR200JYP ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF316-human ENCAB362XEV DNA False 2017-02-03 ENCODE 2 ENCFF006RYF, ENCFF160VXC, ENCFF834TUP 7232749 ENCODE Processing Pipeline c28c2556c0125c990ca144d7b2d07d0e https://www.encodeproject.org/files/ENCFF802QKE/@@download/ENCFF802QKE.bed.gz hg19 released borderline replicate concordance, inconsistent platforms, mild to moderate bottlenecking, moderate library complexity ENCFF496UUC bigBed narrowPeak peaks ENCSR200JYP ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF316-human ENCAB362XEV DNA False 2017-02-03 ENCODE 1 ENCFF488HLT 11001637 ENCODE Processing Pipeline dbad65c97e7694c3c1a079e7fd190bbd https://www.encodeproject.org/files/ENCFF496UUC/@@download/ENCFF496UUC.bigBed hg19 released borderline replicate concordance, inconsistent platforms, mild to moderate bottlenecking, moderate library complexity ENCFF948BSJ bigBed narrowPeak peaks ENCSR200JYP ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF316-human ENCAB362XEV DNA False 2017-02-03 ENCODE 1, 2 ENCFF885FEE 13310357 ENCODE Processing Pipeline 360f85099724265dcb1ae04bc331ecbb https://www.encodeproject.org/files/ENCFF948BSJ/@@download/ENCFF948BSJ.bigBed hg19 released borderline replicate concordance, inconsistent platforms, mild to moderate bottlenecking, moderate library complexity ENCFF432HUY bam unfiltered alignments ENCSR532KTI ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-GTF2E2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 50 ENCFF428TYZ, ENCFF678JFY, ENCFF807MUK 1814232081 ENCODE Processing Pipeline c7b19666789b432c31556b86d768cedd https://www.encodeproject.org/files/ENCFF432HUY/@@download/ENCFF432HUY.bam hg19 released control low read depth, missing genetic modification characterization missing control alignments ENCFF926JFS bam unfiltered alignments ENCSR532KTI ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-GTF2E2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 50 ENCFF164RED, ENCFF272RDB, ENCFF807MUK 1444693738 ENCODE Processing Pipeline e265d8447bf0fcf13ff62d69224ef373 https://www.encodeproject.org/files/ENCFF926JFS/@@download/ENCFF926JFS.bam hg19 released control low read depth, missing genetic modification characterization missing control alignments ENCFF164RED fastq reads ENCSR532KTI ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-GTF2E2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 1 50 single-ended 771933212 Kevin White, UChicago 874087ad8c770b7034514e01d3bc5efb SRA:SRR6213615 https://www.encodeproject.org/files/ENCFF164RED/@@download/ENCFF164RED.fastq.gz Illumina HiSeq 2500 /files/ENCFF422UWG/ released control low read depth, missing genetic modification characterization missing control alignments ENCFF428TYZ fastq reads ENCSR532KTI ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-GTF2E2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 1 50 single-ended 832705246 Kevin White, UChicago 56cbe2ee47f57b98828ae536e5ae7bc7 SRA:SRR6213613 https://www.encodeproject.org/files/ENCFF428TYZ/@@download/ENCFF428TYZ.fastq.gz Illumina HiSeq 2500 /files/ENCFF422UWG/ released control low read depth, missing genetic modification characterization missing control alignments ENCFF272RDB fastq reads ENCSR532KTI ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-GTF2E2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 1 50 single-ended 549895904 Kevin White, UChicago 1a53716734eecce485362609ff412f62 SRA:SRR6213616 https://www.encodeproject.org/files/ENCFF272RDB/@@download/ENCFF272RDB.fastq.gz Illumina HiSeq 2000 /files/ENCFF422UWG/ released control low read depth, missing genetic modification characterization missing control alignments ENCFF678JFY fastq reads ENCSR532KTI ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-GTF2E2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 1 50 single-ended 828146359 Kevin White, UChicago e49ab69fbe2684afa9d5c02178f97d7e SRA:SRR6213614 https://www.encodeproject.org/files/ENCFF678JFY/@@download/ENCFF678JFY.fastq.gz Illumina HiSeq 2500 /files/ENCFF422UWG/ released control low read depth, missing genetic modification characterization missing control alignments ENCFF845ZLZ bam alignments ENCSR532KTI ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-GTF2E2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 50 ENCFF428TYZ, ENCFF678JFY, ENCFF807MUK 1417309669 ENCODE Processing Pipeline 33b09c9c8fd506d834c37d26c05d7663 https://www.encodeproject.org/files/ENCFF845ZLZ/@@download/ENCFF845ZLZ.bam hg19 released control low read depth, missing genetic modification characterization missing control alignments ENCFF552USH bam alignments ENCSR532KTI ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-GTF2E2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 50 ENCFF164RED, ENCFF272RDB, ENCFF807MUK 1106115991 ENCODE Processing Pipeline 27cadad3e64f800c7f0a1f66d91d7ced https://www.encodeproject.org/files/ENCFF552USH/@@download/ENCFF552USH.bam hg19 released control low read depth, missing genetic modification characterization missing control alignments ENCFF653QZA bigWig signal p-value ENCSR532KTI ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-GTF2E2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF552USH, ENCFF577QBK 403406123 ENCODE Processing Pipeline 715115a5cf6b4184eb0efa844e6ce420 https://www.encodeproject.org/files/ENCFF653QZA/@@download/ENCFF653QZA.bigWig hg19 released control low read depth, missing genetic modification characterization missing control alignments ENCFF017ZBH bigWig signal p-value ENCSR532KTI ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-GTF2E2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF577QBK, ENCFF845ZLZ 403147594 ENCODE Processing Pipeline 9bf6217b6b7797c92acec7366389b915 https://www.encodeproject.org/files/ENCFF017ZBH/@@download/ENCFF017ZBH.bigWig hg19 released control low read depth, missing genetic modification characterization missing control alignments ENCFF562GOA bigWig signal p-value ENCSR532KTI ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-GTF2E2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF552USH, ENCFF577QBK, ENCFF845ZLZ 409242245 ENCODE Processing Pipeline b63e2eaf3b7cbf69194b90f8a35047ca https://www.encodeproject.org/files/ENCFF562GOA/@@download/ENCFF562GOA.bigWig hg19 released control low read depth, missing genetic modification characterization missing control alignments ENCFF607RCG bigWig fold change over control ENCSR532KTI ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-GTF2E2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF552USH, ENCFF577QBK 477682674 ENCODE Processing Pipeline 67ef2b1ceb701011805b4e97658a2454 https://www.encodeproject.org/files/ENCFF607RCG/@@download/ENCFF607RCG.bigWig hg19 released control low read depth, missing genetic modification characterization missing control alignments ENCFF390FSE bigWig fold change over control ENCSR532KTI ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-GTF2E2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF577QBK, ENCFF845ZLZ 555134764 ENCODE Processing Pipeline 8e123f58e042c7e4b0dfdd78bffc8f25 https://www.encodeproject.org/files/ENCFF390FSE/@@download/ENCFF390FSE.bigWig hg19 released control low read depth, missing genetic modification characterization missing control alignments ENCFF974CYT bigWig fold change over control ENCSR532KTI ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-GTF2E2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF552USH, ENCFF577QBK, ENCFF845ZLZ 831836922 ENCODE Processing Pipeline 8e422e0fcb5e50588077d2e3c52a57d9 https://www.encodeproject.org/files/ENCFF974CYT/@@download/ENCFF974CYT.bigWig hg19 released control low read depth, missing genetic modification characterization missing control alignments ENCFF796SSH bed narrowPeak peaks ENCSR532KTI ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-GTF2E2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF552USH, ENCFF577QBK 6958561 ENCODE Processing Pipeline 8a9b82bc9d86cdea5b34591b1303d131 https://www.encodeproject.org/files/ENCFF796SSH/@@download/ENCFF796SSH.bed.gz hg19 released control low read depth, missing genetic modification characterization missing control alignments ENCFF138CUL bed narrowPeak peaks ENCSR532KTI ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-GTF2E2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF552USH, ENCFF577QBK, ENCFF845ZLZ 7296018 ENCODE Processing Pipeline 9089567410de069c2ab8b031f9aabad5 https://www.encodeproject.org/files/ENCFF138CUL/@@download/ENCFF138CUL.bed.gz hg19 released control low read depth, missing genetic modification characterization missing control alignments ENCFF513NXG bigBed narrowPeak peaks ENCSR532KTI ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-GTF2E2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF796SSH 12299140 ENCODE Processing Pipeline e514001e050b79daf7c1331d72800f81 https://www.encodeproject.org/files/ENCFF513NXG/@@download/ENCFF513NXG.bigBed hg19 released control low read depth, missing genetic modification characterization missing control alignments ENCFF373TEW bed narrowPeak peaks ENCSR532KTI ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-GTF2E2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF577QBK, ENCFF845ZLZ 6929023 ENCODE Processing Pipeline 70ec6f6f31e08f34de4b50bd339f9dd7 https://www.encodeproject.org/files/ENCFF373TEW/@@download/ENCFF373TEW.bed.gz hg19 released control low read depth, missing genetic modification characterization missing control alignments ENCFF528SDW bigBed narrowPeak peaks ENCSR532KTI ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-GTF2E2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF373TEW 12655497 ENCODE Processing Pipeline 9309472d74fe53526845e0878150a0e6 https://www.encodeproject.org/files/ENCFF528SDW/@@download/ENCFF528SDW.bigBed hg19 released control low read depth, missing genetic modification characterization missing control alignments ENCFF270FKU bigBed narrowPeak peaks ENCSR532KTI ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-GTF2E2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF138CUL 12443013 ENCODE Processing Pipeline f478d4c1dd3a4f3799bac29470b82895 https://www.encodeproject.org/files/ENCFF270FKU/@@download/ENCFF270FKU.bigBed hg19 released control low read depth, missing genetic modification characterization missing control alignments ENCFF518QRE bam unfiltered alignments ENCSR532KTI ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-GTF2E2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 50 ENCFF164RED, ENCFF272RDB, ENCFF643CGH 1449057701 ENCODE Processing Pipeline 9a1de17c0820fb10b82cc559bd66bac9 https://www.encodeproject.org/files/ENCFF518QRE/@@download/ENCFF518QRE.bam GRCh38 released control low read depth, missing genetic modification characterization missing control alignments ENCFF581FUF bam unfiltered alignments ENCSR532KTI ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-GTF2E2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 50 ENCFF428TYZ, ENCFF643CGH, ENCFF678JFY 1820695814 ENCODE Processing Pipeline 2dd296585bef5312b35690fceaa3f817 https://www.encodeproject.org/files/ENCFF581FUF/@@download/ENCFF581FUF.bam GRCh38 released control low read depth, missing genetic modification characterization missing control alignments ENCFF623YPH bam alignments ENCSR532KTI ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-GTF2E2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 50 ENCFF164RED, ENCFF272RDB, ENCFF643CGH 1105625527 ENCODE Processing Pipeline b6a511acf45adaea89a41a162c94e068 https://www.encodeproject.org/files/ENCFF623YPH/@@download/ENCFF623YPH.bam GRCh38 released control low read depth, missing genetic modification characterization missing control alignments ENCFF106BHY bam alignments ENCSR532KTI ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-GTF2E2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 50 ENCFF428TYZ, ENCFF643CGH, ENCFF678JFY 1416696061 ENCODE Processing Pipeline 1a62b40588cea4dd3df8f26e612510b6 https://www.encodeproject.org/files/ENCFF106BHY/@@download/ENCFF106BHY.bam GRCh38 released control low read depth, missing genetic modification characterization missing control alignments ENCFF752YQA bigWig signal p-value ENCSR532KTI ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-GTF2E2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF106BHY 395475654 ENCODE Processing Pipeline b3f6fc02cd00a29b7601755248e48d94 https://www.encodeproject.org/files/ENCFF752YQA/@@download/ENCFF752YQA.bigWig GRCh38 released control low read depth, missing genetic modification characterization missing control alignments ENCFF012COQ bigWig signal p-value ENCSR532KTI ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-GTF2E2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF623YPH 418973437 ENCODE Processing Pipeline 97da2d04390a56e4fa5c5a264a4aa08f https://www.encodeproject.org/files/ENCFF012COQ/@@download/ENCFF012COQ.bigWig GRCh38 released control low read depth, missing genetic modification characterization missing control alignments ENCFF782UZX bigWig signal p-value ENCSR532KTI ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-GTF2E2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF106BHY, ENCFF623YPH 409032006 ENCODE Processing Pipeline 284d3791fcb332ae5bcd7ff916cd4b4b https://www.encodeproject.org/files/ENCFF782UZX/@@download/ENCFF782UZX.bigWig GRCh38 released control low read depth, missing genetic modification characterization missing control alignments ENCFF467BPQ bigWig fold change over control ENCSR532KTI ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-GTF2E2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF623YPH 490533289 ENCODE Processing Pipeline 04fa9b881bde833b3053225cf65a739f https://www.encodeproject.org/files/ENCFF467BPQ/@@download/ENCFF467BPQ.bigWig GRCh38 released control low read depth, missing genetic modification characterization missing control alignments ENCFF023LDG bigWig fold change over control ENCSR532KTI ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-GTF2E2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF106BHY 543576726 ENCODE Processing Pipeline 9099c69281c0b0c236579c1a54e89040 https://www.encodeproject.org/files/ENCFF023LDG/@@download/ENCFF023LDG.bigWig GRCh38 released control low read depth, missing genetic modification characterization missing control alignments ENCFF600BXX bigWig fold change over control ENCSR532KTI ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-GTF2E2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF106BHY, ENCFF623YPH 828663877 ENCODE Processing Pipeline f3404964aca40109e8d0a89484d59273 https://www.encodeproject.org/files/ENCFF600BXX/@@download/ENCFF600BXX.bigWig GRCh38 released control low read depth, missing genetic modification characterization missing control alignments ENCFF455XEV bigBed narrowPeak peaks ENCSR532KTI ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-GTF2E2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF524ZDS 12288763 ENCODE Processing Pipeline 510492881c4bbe21e746c73a191af2be https://www.encodeproject.org/files/ENCFF455XEV/@@download/ENCFF455XEV.bigBed GRCh38 released control low read depth, missing genetic modification characterization missing control alignments ENCFF992KZV bigBed narrowPeak peaks ENCSR532KTI ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-GTF2E2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF379YGQ 12446093 ENCODE Processing Pipeline 9284ea049474101670ca0a1f792a6493 https://www.encodeproject.org/files/ENCFF992KZV/@@download/ENCFF992KZV.bigBed GRCh38 released control low read depth, missing genetic modification characterization missing control alignments ENCFF038KKT bed narrowPeak peaks ENCSR532KTI ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-GTF2E2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF106BHY 6757313 ENCODE Processing Pipeline da401500ae80663a4a0300b04f9cb17b https://www.encodeproject.org/files/ENCFF038KKT/@@download/ENCFF038KKT.bed.gz GRCh38 released control low read depth, missing genetic modification characterization missing control alignments ENCFF524ZDS bed narrowPeak peaks ENCSR532KTI ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-GTF2E2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF623YPH 6831659 ENCODE Processing Pipeline 9e19bba4654b7bd5ecce706517fb17d3 https://www.encodeproject.org/files/ENCFF524ZDS/@@download/ENCFF524ZDS.bed.gz GRCh38 released control low read depth, missing genetic modification characterization missing control alignments ENCFF379YGQ bed narrowPeak peaks ENCSR532KTI ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-GTF2E2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF106BHY, ENCFF623YPH 7230919 ENCODE Processing Pipeline 4307f31879c8d0528be68eea2255ae52 https://www.encodeproject.org/files/ENCFF379YGQ/@@download/ENCFF379YGQ.bed.gz GRCh38 released control low read depth, missing genetic modification characterization missing control alignments ENCFF779YWP bigBed narrowPeak peaks ENCSR532KTI ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-GTF2E2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF038KKT 12659034 ENCODE Processing Pipeline 5b2e01612ba6af7230b43b19fdd753b4 https://www.encodeproject.org/files/ENCFF779YWP/@@download/ENCFF779YWP.bigBed GRCh38 released control low read depth, missing genetic modification characterization missing control alignments ENCFF775TPP bed narrowPeak optimal idr thresholded peaks ENCSR532KTI ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-GTF2E2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF038KKT, ENCFF379YGQ, ENCFF419RSJ, ENCFF524ZDS 301964 ENCODE Processing Pipeline 10316078aed1474f674bbc99b20b1f4a https://www.encodeproject.org/files/ENCFF775TPP/@@download/ENCFF775TPP.bed.gz GRCh38 released control low read depth, missing genetic modification characterization missing control alignments ENCFF746AHG bigBed narrowPeak optimal idr thresholded peaks ENCSR532KTI ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-GTF2E2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF775TPP 745956 ENCODE Processing Pipeline 9d63eba2dea6dd68804886ed39aeaa23 https://www.encodeproject.org/files/ENCFF746AHG/@@download/ENCFF746AHG.bigBed GRCh38 released control low read depth, missing genetic modification characterization missing control alignments ENCFF131VZY bed narrowPeak conservative idr thresholded peaks ENCSR532KTI ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-GTF2E2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF038KKT, ENCFF379YGQ, ENCFF419RSJ, ENCFF524ZDS 243950 ENCODE Processing Pipeline 144c5c466457d13d60b2af3fb0ce2793 https://www.encodeproject.org/files/ENCFF131VZY/@@download/ENCFF131VZY.bed.gz GRCh38 released control low read depth, missing genetic modification characterization missing control alignments ENCFF898WMO bigBed narrowPeak conservative idr thresholded peaks ENCSR532KTI ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-GTF2E2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF131VZY 626154 ENCODE Processing Pipeline 9ae9ff26e5a0f7d1e3704622dce0f83f https://www.encodeproject.org/files/ENCFF898WMO/@@download/ENCFF898WMO.bigBed GRCh38 released control low read depth, missing genetic modification characterization missing control alignments ENCFF254QBD bigBed narrowPeak optimal idr thresholded peaks ENCSR532KTI ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-GTF2E2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF778RMG 575528 ENCODE Processing Pipeline 74db73d707a085093346313f24a8b505 https://www.encodeproject.org/files/ENCFF254QBD/@@download/ENCFF254QBD.bigBed hg19 released control low read depth, missing genetic modification characterization missing control alignments ENCFF778RMG bed narrowPeak optimal idr thresholded peaks ENCSR532KTI ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-GTF2E2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF001TDO, ENCFF138CUL, ENCFF373TEW, ENCFF796SSH 253646 ENCODE Processing Pipeline b10e9ebc53d80fd09275ddc64ec080fb https://www.encodeproject.org/files/ENCFF778RMG/@@download/ENCFF778RMG.bed.gz hg19 released control low read depth, missing genetic modification characterization missing control alignments ENCFF394WVZ bed narrowPeak conservative idr thresholded peaks ENCSR532KTI ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-GTF2E2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF001TDO, ENCFF138CUL, ENCFF373TEW, ENCFF796SSH 197309 ENCODE Processing Pipeline 63e73984e4425e3cbf06cb0ce7558780 https://www.encodeproject.org/files/ENCFF394WVZ/@@download/ENCFF394WVZ.bed.gz hg19 released control low read depth, missing genetic modification characterization missing control alignments ENCFF267PJT bigBed narrowPeak conservative idr thresholded peaks ENCSR532KTI ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-GTF2E2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF394WVZ 476117 ENCODE Processing Pipeline 31c7639c16e37a7b31098b3c7ebfd393 https://www.encodeproject.org/files/ENCFF267PJT/@@download/ENCFF267PJT.bigBed hg19 released control low read depth, missing genetic modification characterization missing control alignments ENCFF000QJT bam alignments ENCSR000BMH ChIP-seq EFO:0002067 K562 cell line Homo sapiens YY1-human ENCAB000ANS DNA see document see document False 2011-07-18 ENCODE 1 ENCFF000QKF 651616111 Richard Myers, HAIB 39b0054740634de5c0835dc3afa333b6 https://www.encodeproject.org/files/ENCFF000QJT/@@download/ENCFF000QJT.bam hg19 archived control low read depth, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF000QJU bigBed broadPeak peaks ENCSR000BMH ChIP-seq EFO:0002067 K562 cell line Homo sapiens YY1-human ENCAB000ANS DNA see document see document False 2011-07-18 ENCODE 1 1 ENCFF001UMB 156851 Richard Myers, HAIB 11b24f9bf231b4e82e5046d5d1a55fb3 https://www.encodeproject.org/files/ENCFF000QJU/@@download/ENCFF000QJU.bigBed hg19 archived control low read depth, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF000QJV bigBed broadPeak peaks ENCSR000BMH ChIP-seq EFO:0002067 K562 cell line Homo sapiens YY1-human ENCAB000ANS DNA see document see document False 2011-07-18 ENCODE 2 1 ENCFF001UMC 1457393 Richard Myers, HAIB e1df68bae6f009575b579030dd97e0f3 https://www.encodeproject.org/files/ENCFF000QJV/@@download/ENCFF000QJV.bigBed hg19 archived control low read depth, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF000QJW bam alignments ENCSR000BMH ChIP-seq EFO:0002067 K562 cell line Homo sapiens YY1-human ENCAB000ANS DNA see document see document False 2011-07-18 ENCODE 2 ENCFF000QKI 1068625433 Richard Myers, HAIB 7aa214fcebd46a0af153437f8fe85a69 https://www.encodeproject.org/files/ENCFF000QJW/@@download/ENCFF000QJW.bam hg19 archived control low read depth, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF000QJZ bigWig raw signal ENCSR000BMH ChIP-seq EFO:0002067 K562 cell line Homo sapiens YY1-human ENCAB000ANS DNA see document see document False 2011-07-18 ENCODE 1 1 6891263 Richard Myers, HAIB 9becec0cf19780ceb815bbe3f3d59c1b https://www.encodeproject.org/files/ENCFF000QJZ/@@download/ENCFF000QJZ.bigWig hg19 archived control low read depth, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample, missing derived_from insufficient replicate concordance, insufficient read depth ENCFF000QKA bigWig raw signal ENCSR000BMH ChIP-seq EFO:0002067 K562 cell line Homo sapiens YY1-human ENCAB000ANS DNA see document see document False 2011-07-18 ENCODE 2 1 38289861 Richard Myers, HAIB 90a334ff291c31ec565fe3a48e10f4cb https://www.encodeproject.org/files/ENCFF000QKA/@@download/ENCFF000QKA.bigWig hg19 archived control low read depth, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample, missing derived_from insufficient replicate concordance, insufficient read depth ENCFF000QKF fastq reads ENCSR000BMH ChIP-seq EFO:0002067 K562 cell line Homo sapiens YY1-human ENCAB000ANS DNA see document see document False 2011-07-18 ENCODE 1 1 36 single-ended 707329662 Richard Myers, HAIB 017471644cf8b8f05a0e7c31b3ad0f8e https://www.encodeproject.org/files/ENCFF000QKF/@@download/ENCFF000QKF.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000QET/ released control low read depth, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF000QKI fastq reads ENCSR000BMH ChIP-seq EFO:0002067 K562 cell line Homo sapiens YY1-human ENCAB000ANS DNA see document see document False 2011-07-18 ENCODE 2 1 36 single-ended 1091684327 Richard Myers, HAIB 6501b550811ccb574f5cd02b9bb5fb2f https://www.encodeproject.org/files/ENCFF000QKI/@@download/ENCFF000QKI.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000QEU/ released control low read depth, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF001UMB bed broadPeak peaks ENCSR000BMH ChIP-seq EFO:0002067 K562 cell line Homo sapiens YY1-human ENCAB000ANS DNA see document see document False 2011-07-18 ENCODE 1 1 73111 Richard Myers, HAIB cd54504c6d0639983b7f883b3aa7fc3e https://www.encodeproject.org/files/ENCFF001UMB/@@download/ENCFF001UMB.bed.gz hg19 archived control low read depth, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample, missing derived_from insufficient replicate concordance, insufficient read depth ENCFF001UMC bed broadPeak peaks ENCSR000BMH ChIP-seq EFO:0002067 K562 cell line Homo sapiens YY1-human ENCAB000ANS DNA see document see document False 2011-07-18 ENCODE 2 1 780775 Richard Myers, HAIB 12795568909c4fa8a89df95b3a2f6c09 https://www.encodeproject.org/files/ENCFF001UMC/@@download/ENCFF001UMC.bed.gz hg19 archived control low read depth, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample, missing derived_from insufficient replicate concordance, insufficient read depth ENCFF002CMX bed narrowPeak optimal idr thresholded peaks ENCSR000BMH ChIP-seq EFO:0002067 K562 cell line Homo sapiens YY1-human ENCAB000ANS DNA see document see document False 2011-07-18 ENCODE 477726 ENCODE Consortium Analysis Working Group ad2e68ab363f735a8ae9c4144c611460 https://www.encodeproject.org/files/ENCFF002CMX/@@download/ENCFF002CMX.bed.gz hg19 archived control low read depth, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample, missing derived_from insufficient replicate concordance, insufficient read depth ENCFF648NKC bigBed narrowPeak optimal idr thresholded peaks ENCSR000BMH ChIP-seq EFO:0002067 K562 cell line Homo sapiens YY1-human ENCAB000ANS DNA see document see document False 2011-07-18 ENCODE ENCFF002CMX 1048797 ENCODE Consortium aba1f321aa1c9e3e43db20379766fe1c https://www.encodeproject.org/files/ENCFF648NKC/@@download/ENCFF648NKC.bigBed hg19 archived control low read depth, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF033HSE bam unfiltered alignments ENCSR000BMH ChIP-seq EFO:0002067 K562 cell line Homo sapiens YY1-human ENCAB000ANS DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000QKF, ENCFF643CGH 870334186 ENCODE Processing Pipeline 06d1f5940c8d8976e1878726dc94239c https://www.encodeproject.org/files/ENCFF033HSE/@@download/ENCFF033HSE.bam GRCh38 released control low read depth, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF567GMS bam alignments ENCSR000BMH ChIP-seq EFO:0002067 K562 cell line Homo sapiens YY1-human ENCAB000ANS DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000QKF, ENCFF643CGH 314274999 ENCODE Processing Pipeline 3fcb9ae7eac6017d046db9fdae60a240 https://www.encodeproject.org/files/ENCFF567GMS/@@download/ENCFF567GMS.bam GRCh38 released control low read depth, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF723CCK bam unfiltered alignments ENCSR000BMH ChIP-seq EFO:0002067 K562 cell line Homo sapiens YY1-human ENCAB000ANS DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000QKI, ENCFF643CGH 1367082469 ENCODE Processing Pipeline 7a3ca0a15d6b7908a0b324c9b2eceea5 https://www.encodeproject.org/files/ENCFF723CCK/@@download/ENCFF723CCK.bam GRCh38 released control low read depth, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF067TWQ bam alignments ENCSR000BMH ChIP-seq EFO:0002067 K562 cell line Homo sapiens YY1-human ENCAB000ANS DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000QKI, ENCFF643CGH 732096181 ENCODE Processing Pipeline 0b4e602e207b942e965e1c7f044929eb https://www.encodeproject.org/files/ENCFF067TWQ/@@download/ENCFF067TWQ.bam GRCh38 released control low read depth, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF470KXE bam unfiltered alignments ENCSR000BMH ChIP-seq EFO:0002067 K562 cell line Homo sapiens YY1-human ENCAB000ANS DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000QKF, ENCFF807MUK 868022856 ENCODE Processing Pipeline 38677f62d3a1a6091f4a133096172988 https://www.encodeproject.org/files/ENCFF470KXE/@@download/ENCFF470KXE.bam hg19 released control low read depth, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF189XLI bam alignments ENCSR000BMH ChIP-seq EFO:0002067 K562 cell line Homo sapiens YY1-human ENCAB000ANS DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000QKF, ENCFF807MUK 314613447 ENCODE Processing Pipeline 3fead3e9598f0ce64f3686cc9ce43ccd https://www.encodeproject.org/files/ENCFF189XLI/@@download/ENCFF189XLI.bam hg19 released control low read depth, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF280JRK bam unfiltered alignments ENCSR000BMH ChIP-seq EFO:0002067 K562 cell line Homo sapiens YY1-human ENCAB000ANS DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000QKI, ENCFF807MUK 1364721177 ENCODE Processing Pipeline 0713d0d16856cbeb940a763d5ad7ceae https://www.encodeproject.org/files/ENCFF280JRK/@@download/ENCFF280JRK.bam hg19 released control low read depth, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF872BSD bam alignments ENCSR000BMH ChIP-seq EFO:0002067 K562 cell line Homo sapiens YY1-human ENCAB000ANS DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000QKI, ENCFF807MUK 732713870 ENCODE Processing Pipeline c09b4756f74c36bf14527f52df5fe98b https://www.encodeproject.org/files/ENCFF872BSD/@@download/ENCFF872BSD.bam hg19 released control low read depth, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF955NDO bigWig signal p-value ENCSR000BMH ChIP-seq EFO:0002067 K562 cell line Homo sapiens YY1-human ENCAB000ANS DNA see document see document False 2011-07-18 ENCODE 1 ENCFF567GMS, ENCFF913HVS 360771250 ENCODE Processing Pipeline 41e97f2b0e155089f399a5a86c06bfd3 https://www.encodeproject.org/files/ENCFF955NDO/@@download/ENCFF955NDO.bigWig GRCh38 released control low read depth, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF128ALY bigWig signal p-value ENCSR000BMH ChIP-seq EFO:0002067 K562 cell line Homo sapiens YY1-human ENCAB000ANS DNA see document see document False 2011-07-18 ENCODE 2 ENCFF067TWQ, ENCFF234NVU, ENCFF913HVS 614292126 ENCODE Processing Pipeline f383e6269341ae4700f8f6ce20724ce3 https://www.encodeproject.org/files/ENCFF128ALY/@@download/ENCFF128ALY.bigWig GRCh38 released control low read depth, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF230VJT bigWig signal p-value ENCSR000BMH ChIP-seq EFO:0002067 K562 cell line Homo sapiens YY1-human ENCAB000ANS DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF067TWQ, ENCFF234NVU, ENCFF567GMS, ENCFF913HVS 638026892 ENCODE Processing Pipeline a7dab16f98e045aded9e19c5ad1212f8 https://www.encodeproject.org/files/ENCFF230VJT/@@download/ENCFF230VJT.bigWig GRCh38 released control low read depth, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF404MNG bigWig fold change over control ENCSR000BMH ChIP-seq EFO:0002067 K562 cell line Homo sapiens YY1-human ENCAB000ANS DNA see document see document False 2011-07-18 ENCODE 2 ENCFF067TWQ, ENCFF234NVU, ENCFF913HVS 357318789 ENCODE Processing Pipeline b4c2b3ca0434a13d86472f87e13dc896 https://www.encodeproject.org/files/ENCFF404MNG/@@download/ENCFF404MNG.bigWig GRCh38 released control low read depth, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF551ZHN bigWig fold change over control ENCSR000BMH ChIP-seq EFO:0002067 K562 cell line Homo sapiens YY1-human ENCAB000ANS DNA see document see document False 2011-07-18 ENCODE 1 ENCFF567GMS, ENCFF913HVS 148829575 ENCODE Processing Pipeline a4635d341ca63c084cf04bd68ee766f3 https://www.encodeproject.org/files/ENCFF551ZHN/@@download/ENCFF551ZHN.bigWig GRCh38 released control low read depth, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF023AFF bigWig fold change over control ENCSR000BMH ChIP-seq EFO:0002067 K562 cell line Homo sapiens YY1-human ENCAB000ANS DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF067TWQ, ENCFF234NVU, ENCFF567GMS, ENCFF913HVS 488567089 ENCODE Processing Pipeline 4f6b20f3af4952025fc551c6cf3a1e6b https://www.encodeproject.org/files/ENCFF023AFF/@@download/ENCFF023AFF.bigWig GRCh38 released control low read depth, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF541WVG bed narrowPeak peaks ENCSR000BMH ChIP-seq EFO:0002067 K562 cell line Homo sapiens YY1-human ENCAB000ANS DNA see document see document False 2011-07-18 ENCODE 1 ENCFF567GMS, ENCFF913HVS 2421088 ENCODE Processing Pipeline 3bbca13cf836fd9b3061d2d9d000ff37 https://www.encodeproject.org/files/ENCFF541WVG/@@download/ENCFF541WVG.bed.gz GRCh38 released control low read depth, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF908XHK bed narrowPeak peaks ENCSR000BMH ChIP-seq EFO:0002067 K562 cell line Homo sapiens YY1-human ENCAB000ANS DNA see document see document False 2011-07-18 ENCODE 2 ENCFF067TWQ, ENCFF234NVU, ENCFF913HVS 5930295 ENCODE Processing Pipeline dce3876dc35ff66f9ce31a1e98a96d32 https://www.encodeproject.org/files/ENCFF908XHK/@@download/ENCFF908XHK.bed.gz GRCh38 released control low read depth, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF842DGW bigBed narrowPeak peaks ENCSR000BMH ChIP-seq EFO:0002067 K562 cell line Homo sapiens YY1-human ENCAB000ANS DNA see document see document False 2011-07-18 ENCODE 1 ENCFF541WVG 5341845 ENCODE Processing Pipeline 1703ace719dfe2a144e637aaccc5346e https://www.encodeproject.org/files/ENCFF842DGW/@@download/ENCFF842DGW.bigBed GRCh38 released control low read depth, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF535FVE bed narrowPeak peaks ENCSR000BMH ChIP-seq EFO:0002067 K562 cell line Homo sapiens YY1-human ENCAB000ANS DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF067TWQ, ENCFF234NVU, ENCFF567GMS, ENCFF913HVS 6003961 ENCODE Processing Pipeline 848e5667d4bfa1ea05c8b4392248d48a https://www.encodeproject.org/files/ENCFF535FVE/@@download/ENCFF535FVE.bed.gz GRCh38 released control low read depth, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF087AIY bigBed narrowPeak peaks ENCSR000BMH ChIP-seq EFO:0002067 K562 cell line Homo sapiens YY1-human ENCAB000ANS DNA see document see document False 2011-07-18 ENCODE 2 ENCFF908XHK 13162484 ENCODE Processing Pipeline 8d5e5f0b77c9604cdb8989366bbe53f3 https://www.encodeproject.org/files/ENCFF087AIY/@@download/ENCFF087AIY.bigBed GRCh38 released control low read depth, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF922RRJ bigBed narrowPeak peaks ENCSR000BMH ChIP-seq EFO:0002067 K562 cell line Homo sapiens YY1-human ENCAB000ANS DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF535FVE 13290388 ENCODE Processing Pipeline 22010be82bd6ca15b4de250bb6eae1bc https://www.encodeproject.org/files/ENCFF922RRJ/@@download/ENCFF922RRJ.bigBed GRCh38 released control low read depth, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF157ELX bigBed narrowPeak conservative idr thresholded peaks ENCSR000BMH ChIP-seq EFO:0002067 K562 cell line Homo sapiens YY1-human ENCAB000ANS DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF938BND 268933 ENCODE Processing Pipeline 36d8e00121d911d3f97e37a1e82eeb84 https://www.encodeproject.org/files/ENCFF157ELX/@@download/ENCFF157ELX.bigBed GRCh38 released control low read depth, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF024TJO bed narrowPeak optimal idr thresholded peaks ENCSR000BMH ChIP-seq EFO:0002067 K562 cell line Homo sapiens YY1-human ENCAB000ANS DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF419RSJ, ENCFF535FVE, ENCFF541WVG, ENCFF908XHK 507864 ENCODE Processing Pipeline 0dd0a3eb71a0ca45616c9c9568ab7bb5 https://www.encodeproject.org/files/ENCFF024TJO/@@download/ENCFF024TJO.bed.gz GRCh38 released control low read depth, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF938BND bed narrowPeak conservative idr thresholded peaks ENCSR000BMH ChIP-seq EFO:0002067 K562 cell line Homo sapiens YY1-human ENCAB000ANS DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF419RSJ, ENCFF535FVE, ENCFF541WVG, ENCFF908XHK 134424 ENCODE Processing Pipeline 7305cbf694d07d141a50db874c165cce https://www.encodeproject.org/files/ENCFF938BND/@@download/ENCFF938BND.bed.gz GRCh38 released control low read depth, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF052UCG bigBed narrowPeak optimal idr thresholded peaks ENCSR000BMH ChIP-seq EFO:0002067 K562 cell line Homo sapiens YY1-human ENCAB000ANS DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF024TJO 1084835 ENCODE Processing Pipeline 21bd4d34b63bf1c10be69aaefb642fc1 https://www.encodeproject.org/files/ENCFF052UCG/@@download/ENCFF052UCG.bigBed GRCh38 released control low read depth, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF983TTF bigWig signal p-value ENCSR000BMH ChIP-seq EFO:0002067 K562 cell line Homo sapiens YY1-human ENCAB000ANS DNA see document see document False 2011-07-18 ENCODE 1 ENCFF189XLI, ENCFF701KUD 296362934 ENCODE Processing Pipeline 0f29757c0369bb61b0517c64ff0de62b https://www.encodeproject.org/files/ENCFF983TTF/@@download/ENCFF983TTF.bigWig hg19 released control low read depth, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF687EPM bigWig fold change over control ENCSR000BMH ChIP-seq EFO:0002067 K562 cell line Homo sapiens YY1-human ENCAB000ANS DNA see document see document False 2011-07-18 ENCODE 1 ENCFF189XLI, ENCFF701KUD 150111637 ENCODE Processing Pipeline c4fa9daaf100179cdd08d4282beaa485 https://www.encodeproject.org/files/ENCFF687EPM/@@download/ENCFF687EPM.bigWig hg19 released control low read depth, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF085GZR bigWig signal p-value ENCSR000BMH ChIP-seq EFO:0002067 K562 cell line Homo sapiens YY1-human ENCAB000ANS DNA see document see document False 2011-07-18 ENCODE 2 ENCFF585PFH, ENCFF701KUD, ENCFF872BSD 514340738 ENCODE Processing Pipeline d8972e1983d6aaabe5cbe319d59e364c https://www.encodeproject.org/files/ENCFF085GZR/@@download/ENCFF085GZR.bigWig hg19 released control low read depth, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF281GRT bigWig signal p-value ENCSR000BMH ChIP-seq EFO:0002067 K562 cell line Homo sapiens YY1-human ENCAB000ANS DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF189XLI, ENCFF585PFH, ENCFF701KUD, ENCFF872BSD 733419119 ENCODE Processing Pipeline aa99777624faec5b7d43e163caac3344 https://www.encodeproject.org/files/ENCFF281GRT/@@download/ENCFF281GRT.bigWig hg19 released control low read depth, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF673NLS bigWig fold change over control ENCSR000BMH ChIP-seq EFO:0002067 K562 cell line Homo sapiens YY1-human ENCAB000ANS DNA see document see document False 2011-07-18 ENCODE 2 ENCFF585PFH, ENCFF701KUD, ENCFF872BSD 359281105 ENCODE Processing Pipeline c03286e75f14713c82f90c054faf02c4 https://www.encodeproject.org/files/ENCFF673NLS/@@download/ENCFF673NLS.bigWig hg19 released control low read depth, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF701OSU bed narrowPeak peaks ENCSR000BMH ChIP-seq EFO:0002067 K562 cell line Homo sapiens YY1-human ENCAB000ANS DNA see document see document False 2011-07-18 ENCODE 1 ENCFF189XLI, ENCFF701KUD 2427491 ENCODE Processing Pipeline ecadcaf2b4c40e427cd5818e778ecdad https://www.encodeproject.org/files/ENCFF701OSU/@@download/ENCFF701OSU.bed.gz hg19 released control low read depth, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF720DVS bed narrowPeak peaks ENCSR000BMH ChIP-seq EFO:0002067 K562 cell line Homo sapiens YY1-human ENCAB000ANS DNA see document see document False 2011-07-18 ENCODE 2 ENCFF585PFH, ENCFF701KUD, ENCFF872BSD 5822760 ENCODE Processing Pipeline a211c953b14fb046093aa85149bb2475 https://www.encodeproject.org/files/ENCFF720DVS/@@download/ENCFF720DVS.bed.gz hg19 released control low read depth, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF374WFD bigBed narrowPeak peaks ENCSR000BMH ChIP-seq EFO:0002067 K562 cell line Homo sapiens YY1-human ENCAB000ANS DNA see document see document False 2011-07-18 ENCODE 1 ENCFF701OSU 5346886 ENCODE Processing Pipeline aff35ca59c0862847cfa965cbb59c48d https://www.encodeproject.org/files/ENCFF374WFD/@@download/ENCFF374WFD.bigBed hg19 released control low read depth, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF384ERU bigWig fold change over control ENCSR000BMH ChIP-seq EFO:0002067 K562 cell line Homo sapiens YY1-human ENCAB000ANS DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF189XLI, ENCFF585PFH, ENCFF701KUD, ENCFF872BSD 491076311 ENCODE Processing Pipeline cc3fb37dbd83faabc1d346de24de8be4 https://www.encodeproject.org/files/ENCFF384ERU/@@download/ENCFF384ERU.bigWig hg19 released control low read depth, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF223XFI bed narrowPeak peaks ENCSR000BMH ChIP-seq EFO:0002067 K562 cell line Homo sapiens YY1-human ENCAB000ANS DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF189XLI, ENCFF585PFH, ENCFF701KUD, ENCFF872BSD 5964855 ENCODE Processing Pipeline b9006b9b1bff6e1dfd4026729fc7f6c3 https://www.encodeproject.org/files/ENCFF223XFI/@@download/ENCFF223XFI.bed.gz hg19 released control low read depth, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF195IBH bigBed narrowPeak peaks ENCSR000BMH ChIP-seq EFO:0002067 K562 cell line Homo sapiens YY1-human ENCAB000ANS DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF223XFI 13228183 ENCODE Processing Pipeline 1f68d446b2cac06ee7a8d42d26611a07 https://www.encodeproject.org/files/ENCFF195IBH/@@download/ENCFF195IBH.bigBed hg19 released control low read depth, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF328XKC bed narrowPeak optimal idr thresholded peaks ENCSR000BMH ChIP-seq EFO:0002067 K562 cell line Homo sapiens YY1-human ENCAB000ANS DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF001TDO, ENCFF223XFI, ENCFF701OSU, ENCFF720DVS 497639 ENCODE Processing Pipeline 01d30b98e8410f018839a27847bfd7fc https://www.encodeproject.org/files/ENCFF328XKC/@@download/ENCFF328XKC.bed.gz hg19 released control low read depth, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF500DIS bigBed narrowPeak peaks ENCSR000BMH ChIP-seq EFO:0002067 K562 cell line Homo sapiens YY1-human ENCAB000ANS DNA see document see document False 2011-07-18 ENCODE 2 ENCFF720DVS 13041974 ENCODE Processing Pipeline 3d24037ee393b1db55432e52f208678a https://www.encodeproject.org/files/ENCFF500DIS/@@download/ENCFF500DIS.bigBed hg19 released control low read depth, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF294BOQ bigBed narrowPeak conservative idr thresholded peaks ENCSR000BMH ChIP-seq EFO:0002067 K562 cell line Homo sapiens YY1-human ENCAB000ANS DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF049NZU 268124 ENCODE Processing Pipeline 1090e4e54c48104997cf86816d9c2acc https://www.encodeproject.org/files/ENCFF294BOQ/@@download/ENCFF294BOQ.bigBed hg19 released control low read depth, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF716IKZ bigBed narrowPeak optimal idr thresholded peaks ENCSR000BMH ChIP-seq EFO:0002067 K562 cell line Homo sapiens YY1-human ENCAB000ANS DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF328XKC 1064879 ENCODE Processing Pipeline 2cda74b97b64d7dd6dfdf018c451bbd1 https://www.encodeproject.org/files/ENCFF716IKZ/@@download/ENCFF716IKZ.bigBed hg19 released control low read depth, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF049NZU bed narrowPeak conservative idr thresholded peaks ENCSR000BMH ChIP-seq EFO:0002067 K562 cell line Homo sapiens YY1-human ENCAB000ANS DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF001TDO, ENCFF223XFI, ENCFF701OSU, ENCFF720DVS 134790 ENCODE Processing Pipeline 17e6eca4ceab61afbec594d552571ad4 https://www.encodeproject.org/files/ENCFF049NZU/@@download/ENCFF049NZU.bed.gz hg19 released control low read depth, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, insufficient read depth ENCFF138BAE bam unfiltered alignments ENCSR091GVJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ATF1-human ENCAB728YTO DNA False 2016-01-14 ENCODE 2 100 ENCFF109NTO, ENCFF693JKI, ENCFF807MUK 5277957027 ENCODE Processing Pipeline 41f17c6d1172607d02194e9ed2f84494 https://www.encodeproject.org/files/ENCFF138BAE/@@download/ENCFF138BAE.bam hg19 released missing genetic modification characterization missing control alignments ENCFF902YFJ bam unfiltered alignments ENCSR091GVJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ATF1-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1 100 ENCFF016FNK, ENCFF018HQR, ENCFF807MUK 5960673625 ENCODE Processing Pipeline 2db6981997684523d3ab6360fe00b759 https://www.encodeproject.org/files/ENCFF902YFJ/@@download/ENCFF902YFJ.bam hg19 released missing genetic modification characterization missing control alignments ENCFF109NTO fastq reads ENCSR091GVJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ATF1-human ENCAB728YTO DNA False 2016-01-14 ENCODE 2 1 100 paired-ended 2 ENCFF693JKI 2436438396 Michael Snyder, Stanford e83d4c3286bf05cced3f10c7a93b6645 SRA:SRR5111080 https://www.encodeproject.org/files/ENCFF109NTO/@@download/ENCFF109NTO.fastq.gz Illumina HiSeq 2000 /files/ENCFF340RXU/ released missing genetic modification characterization missing control alignments ENCFF693JKI fastq reads ENCSR091GVJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ATF1-human ENCAB728YTO DNA False 2016-01-14 ENCODE 2 1 100 paired-ended 1 ENCFF109NTO 2433707547 Michael Snyder, Stanford 6f5234f3d72ee3da80b3b56a967719c1 SRA:SRR5111080 https://www.encodeproject.org/files/ENCFF693JKI/@@download/ENCFF693JKI.fastq.gz Illumina HiSeq 2000 /files/ENCFF698OMK/ released missing genetic modification characterization missing control alignments ENCFF018HQR fastq reads ENCSR091GVJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ATF1-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1 1 100 paired-ended 1 ENCFF016FNK 2770431380 Michael Snyder, Stanford 279d754d9808341b32be5e093707e806 SRA:SRR5111079 https://www.encodeproject.org/files/ENCFF018HQR/@@download/ENCFF018HQR.fastq.gz Illumina HiSeq 2000 /files/ENCFF698OMK/ released missing genetic modification characterization missing control alignments ENCFF016FNK fastq reads ENCSR091GVJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ATF1-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1 1 100 paired-ended 2 ENCFF018HQR 2758667004 Michael Snyder, Stanford fc091d24e1fcee40075c6c82c482c43e SRA:SRR5111079 https://www.encodeproject.org/files/ENCFF016FNK/@@download/ENCFF016FNK.fastq.gz Illumina HiSeq 2000 /files/ENCFF340RXU/ released missing genetic modification characterization missing control alignments ENCFF800DAY bam alignments ENCSR091GVJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ATF1-human ENCAB728YTO DNA False 2016-01-14 ENCODE 2 100 ENCFF109NTO, ENCFF693JKI, ENCFF807MUK 4500247179 ENCODE Processing Pipeline 910c7a064b27e26fea4bdb268bb377d7 https://www.encodeproject.org/files/ENCFF800DAY/@@download/ENCFF800DAY.bam hg19 released missing genetic modification characterization missing control alignments ENCFF465GPJ bam alignments ENCSR091GVJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ATF1-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1 100 ENCFF016FNK, ENCFF018HQR, ENCFF807MUK 5182697564 ENCODE Processing Pipeline cf8301206a1fca0a2e466c90573af3cb https://www.encodeproject.org/files/ENCFF465GPJ/@@download/ENCFF465GPJ.bam hg19 released missing genetic modification characterization missing control alignments ENCFF437TVW bigWig signal p-value ENCSR091GVJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ATF1-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF465GPJ, ENCFF774NMX, ENCFF800DAY 1413415721 ENCODE Processing Pipeline 429f7d69ff96a51f8932aa818fd9b373 https://www.encodeproject.org/files/ENCFF437TVW/@@download/ENCFF437TVW.bigWig hg19 released missing genetic modification characterization missing control alignments ENCFF829DDT bigWig fold change over control ENCSR091GVJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ATF1-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF465GPJ, ENCFF774NMX, ENCFF800DAY 1855393414 ENCODE Processing Pipeline a358dde7a72614346619dcab3ca9b8bd https://www.encodeproject.org/files/ENCFF829DDT/@@download/ENCFF829DDT.bigWig hg19 released missing genetic modification characterization missing control alignments ENCFF878XMR bam unfiltered alignments ENCSR091GVJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ATF1-human ENCAB728YTO DNA False 2016-01-14 ENCODE 2 100 ENCFF109NTO, ENCFF643CGH, ENCFF693JKI 5285270120 ENCODE Processing Pipeline 8641fdd9b4e4701dd79cf914b1df78e0 https://www.encodeproject.org/files/ENCFF878XMR/@@download/ENCFF878XMR.bam GRCh38 released missing genetic modification characterization missing control alignments ENCFF774RUP bam alignments ENCSR091GVJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ATF1-human ENCAB728YTO DNA False 2016-01-14 ENCODE 2 100 ENCFF109NTO, ENCFF643CGH, ENCFF693JKI 4503725850 ENCODE Processing Pipeline da3182d726aca0a28b985e493e142a1d https://www.encodeproject.org/files/ENCFF774RUP/@@download/ENCFF774RUP.bam GRCh38 released missing genetic modification characterization missing control alignments ENCFF954ERL bam unfiltered alignments ENCSR091GVJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ATF1-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1 100 ENCFF016FNK, ENCFF018HQR, ENCFF643CGH 5968672090 ENCODE Processing Pipeline 3ef2499326df59e0d1b89356d0f2d07f https://www.encodeproject.org/files/ENCFF954ERL/@@download/ENCFF954ERL.bam GRCh38 released missing genetic modification characterization missing control alignments ENCFF892LAS bam alignments ENCSR091GVJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ATF1-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1 100 ENCFF016FNK, ENCFF018HQR, ENCFF643CGH 5187543119 ENCODE Processing Pipeline 668131cdcfda2364a999d05cac2c0e45 https://www.encodeproject.org/files/ENCFF892LAS/@@download/ENCFF892LAS.bam GRCh38 released missing genetic modification characterization missing control alignments ENCFF593EFQ bigWig signal p-value ENCSR091GVJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ATF1-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1 ENCFF892LAS 1231601943 ENCODE Processing Pipeline 9a7dbf838b72065e2d9faacd43af4e82 https://www.encodeproject.org/files/ENCFF593EFQ/@@download/ENCFF593EFQ.bigWig GRCh38 released missing genetic modification characterization missing control alignments ENCFF180WCG bigWig signal p-value ENCSR091GVJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ATF1-human ENCAB728YTO DNA False 2016-01-14 ENCODE 2 ENCFF774RUP 1030681792 ENCODE Processing Pipeline 944893f5a13ca06e4ac301bc65a8177e https://www.encodeproject.org/files/ENCFF180WCG/@@download/ENCFF180WCG.bigWig GRCh38 released missing genetic modification characterization missing control alignments ENCFF609DYE bigWig signal p-value ENCSR091GVJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ATF1-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF774RUP, ENCFF892LAS 1415800780 ENCODE Processing Pipeline f75976541d6809ce80ade3581a775ce7 https://www.encodeproject.org/files/ENCFF609DYE/@@download/ENCFF609DYE.bigWig GRCh38 released missing genetic modification characterization missing control alignments ENCFF734QEM bigWig fold change over control ENCSR091GVJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ATF1-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1 ENCFF892LAS 1312047970 ENCODE Processing Pipeline 783a59abec113082b6ec05f5adcd6cb1 https://www.encodeproject.org/files/ENCFF734QEM/@@download/ENCFF734QEM.bigWig GRCh38 released missing genetic modification characterization missing control alignments ENCFF077WVE bigWig fold change over control ENCSR091GVJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ATF1-human ENCAB728YTO DNA False 2016-01-14 ENCODE 2 ENCFF774RUP 1226203571 ENCODE Processing Pipeline e133486a3907db175e0c51e51f728fd8 https://www.encodeproject.org/files/ENCFF077WVE/@@download/ENCFF077WVE.bigWig GRCh38 released missing genetic modification characterization missing control alignments ENCFF415CUC bigWig fold change over control ENCSR091GVJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ATF1-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF774RUP, ENCFF892LAS 1860657297 ENCODE Processing Pipeline 116a3ca0abc60a335cb475211edfabf0 https://www.encodeproject.org/files/ENCFF415CUC/@@download/ENCFF415CUC.bigWig GRCh38 released missing genetic modification characterization missing control alignments ENCFF465UUK bed narrowPeak peaks ENCSR091GVJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ATF1-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF774RUP, ENCFF892LAS 7244276 ENCODE Processing Pipeline b8729c74c23dbe3c71f8a3245a8bb84e https://www.encodeproject.org/files/ENCFF465UUK/@@download/ENCFF465UUK.bed.gz GRCh38 released missing genetic modification characterization missing control alignments ENCFF881KZL bigBed narrowPeak peaks ENCSR091GVJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ATF1-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF465UUK 12823034 ENCODE Processing Pipeline 93a276180a4b60a115ae0b863c973654 https://www.encodeproject.org/files/ENCFF881KZL/@@download/ENCFF881KZL.bigBed GRCh38 released missing genetic modification characterization missing control alignments ENCFF358DZO bed narrowPeak peaks ENCSR091GVJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ATF1-human ENCAB728YTO DNA False 2016-01-14 ENCODE 2 ENCFF774RUP 7090603 ENCODE Processing Pipeline 381401889a95ca93e2cb2d9b36fe45c2 https://www.encodeproject.org/files/ENCFF358DZO/@@download/ENCFF358DZO.bed.gz GRCh38 released missing genetic modification characterization missing control alignments ENCFF142JBX bed narrowPeak conservative idr thresholded peaks ENCSR091GVJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ATF1-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF358DZO, ENCFF360VMU, ENCFF419RSJ, ENCFF465UUK 785453 ENCODE Processing Pipeline e57eba8feec67bda3cc33301d2309710 https://www.encodeproject.org/files/ENCFF142JBX/@@download/ENCFF142JBX.bed.gz GRCh38 released missing genetic modification characterization missing control alignments ENCFF327MSC bigBed narrowPeak optimal idr thresholded peaks ENCSR091GVJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ATF1-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF236XAZ 1691335 ENCODE Processing Pipeline 5e01c5fb027e7b9353b967c043ff3ff3 https://www.encodeproject.org/files/ENCFF327MSC/@@download/ENCFF327MSC.bigBed GRCh38 released missing genetic modification characterization missing control alignments ENCFF360VMU bed narrowPeak peaks ENCSR091GVJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ATF1-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1 ENCFF892LAS 7143006 ENCODE Processing Pipeline ebbd9b80b1f89bd1467c700a2e1c4928 https://www.encodeproject.org/files/ENCFF360VMU/@@download/ENCFF360VMU.bed.gz GRCh38 released missing genetic modification characterization missing control alignments ENCFF078CZP bigBed narrowPeak conservative idr thresholded peaks ENCSR091GVJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ATF1-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF142JBX 1603738 ENCODE Processing Pipeline 39c0cb1efcf9802a3a722bc967a1a44b https://www.encodeproject.org/files/ENCFF078CZP/@@download/ENCFF078CZP.bigBed GRCh38 released missing genetic modification characterization missing control alignments ENCFF253QQP bigBed narrowPeak peaks ENCSR091GVJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ATF1-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1 ENCFF360VMU 12978685 ENCODE Processing Pipeline 2cf0fb643f72b3a47769fdc4d643a72b https://www.encodeproject.org/files/ENCFF253QQP/@@download/ENCFF253QQP.bigBed GRCh38 released missing genetic modification characterization missing control alignments ENCFF652IOK bigBed narrowPeak peaks ENCSR091GVJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ATF1-human ENCAB728YTO DNA False 2016-01-14 ENCODE 2 ENCFF358DZO 12881503 ENCODE Processing Pipeline 658ab4d5f03f8780418f068a47358004 https://www.encodeproject.org/files/ENCFF652IOK/@@download/ENCFF652IOK.bigBed GRCh38 released missing genetic modification characterization missing control alignments ENCFF236XAZ bed narrowPeak optimal idr thresholded peaks ENCSR091GVJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ATF1-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF358DZO, ENCFF360VMU, ENCFF419RSJ, ENCFF465UUK 837317 ENCODE Processing Pipeline a2c7a380e59e2af725332014de4ffe83 https://www.encodeproject.org/files/ENCFF236XAZ/@@download/ENCFF236XAZ.bed.gz GRCh38 released missing genetic modification characterization missing control alignments ENCFF972JLW bigWig fold change over control ENCSR091GVJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ATF1-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1 ENCFF465GPJ, ENCFF774NMX 1330971408 ENCODE Processing Pipeline e64228f492270b4d14d95ef68e966567 https://www.encodeproject.org/files/ENCFF972JLW/@@download/ENCFF972JLW.bigWig hg19 released missing genetic modification characterization missing control alignments ENCFF920QBL bigWig fold change over control ENCSR091GVJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ATF1-human ENCAB728YTO DNA False 2016-01-14 ENCODE 2 ENCFF774NMX, ENCFF800DAY 1182758778 ENCODE Processing Pipeline ad034f262ef55e82d1dbd879576e3b87 https://www.encodeproject.org/files/ENCFF920QBL/@@download/ENCFF920QBL.bigWig hg19 released missing genetic modification characterization missing control alignments ENCFF694DLB bigBed narrowPeak peaks ENCSR091GVJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ATF1-human ENCAB728YTO DNA False 2016-01-14 ENCODE 2 ENCFF621JGB 12883159 ENCODE Processing Pipeline 88aabf635fa8a004c82194e92d88f8a4 https://www.encodeproject.org/files/ENCFF694DLB/@@download/ENCFF694DLB.bigBed hg19 released missing genetic modification characterization missing control alignments ENCFF884CMO bed narrowPeak conservative idr thresholded peaks ENCSR091GVJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ATF1-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF001TDO, ENCFF077HXE, ENCFF234YBT, ENCFF621JGB 794386 ENCODE Processing Pipeline e5bf0fc333d9d3474291eda0297be8bb https://www.encodeproject.org/files/ENCFF884CMO/@@download/ENCFF884CMO.bed.gz hg19 released missing genetic modification characterization missing control alignments ENCFF234YBT bed narrowPeak peaks ENCSR091GVJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ATF1-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1 ENCFF465GPJ, ENCFF774NMX 7114931 ENCODE Processing Pipeline 79d418b70086dce5c7e765c1e2642f73 https://www.encodeproject.org/files/ENCFF234YBT/@@download/ENCFF234YBT.bed.gz hg19 released missing genetic modification characterization missing control alignments ENCFF621JGB bed narrowPeak peaks ENCSR091GVJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ATF1-human ENCAB728YTO DNA False 2016-01-14 ENCODE 2 ENCFF774NMX, ENCFF800DAY 7098197 ENCODE Processing Pipeline 1ba4b01a7a46ffd49b60d3c82a7a8f57 https://www.encodeproject.org/files/ENCFF621JGB/@@download/ENCFF621JGB.bed.gz hg19 released missing genetic modification characterization missing control alignments ENCFF800QOA bigBed narrowPeak conservative idr thresholded peaks ENCSR091GVJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ATF1-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF884CMO 1613721 ENCODE Processing Pipeline bd80cf3d60eca9961c95e99132ad331c https://www.encodeproject.org/files/ENCFF800QOA/@@download/ENCFF800QOA.bigBed hg19 released missing genetic modification characterization missing control alignments ENCFF490KQS bigWig signal p-value ENCSR091GVJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ATF1-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1 ENCFF465GPJ, ENCFF774NMX 1235830357 ENCODE Processing Pipeline 2be3174a450d181382bb5c13e8529c7a https://www.encodeproject.org/files/ENCFF490KQS/@@download/ENCFF490KQS.bigWig hg19 released missing genetic modification characterization missing control alignments ENCFF687CBZ bigBed narrowPeak peaks ENCSR091GVJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ATF1-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1 ENCFF234YBT 12929703 ENCODE Processing Pipeline a70881b3aa0e2821d71c8787fd91f52d https://www.encodeproject.org/files/ENCFF687CBZ/@@download/ENCFF687CBZ.bigBed hg19 released missing genetic modification characterization missing control alignments ENCFF232KAH bed narrowPeak optimal idr thresholded peaks ENCSR091GVJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ATF1-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF001TDO, ENCFF077HXE, ENCFF234YBT, ENCFF621JGB 847500 ENCODE Processing Pipeline c7510df2956ffb6634c5f8adaa79d8ec https://www.encodeproject.org/files/ENCFF232KAH/@@download/ENCFF232KAH.bed.gz hg19 released missing genetic modification characterization missing control alignments ENCFF077HXE bed narrowPeak peaks ENCSR091GVJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ATF1-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF465GPJ, ENCFF774NMX, ENCFF800DAY 7263586 ENCODE Processing Pipeline 649e7a6167a0693ae434010d6aea2ae9 https://www.encodeproject.org/files/ENCFF077HXE/@@download/ENCFF077HXE.bed.gz hg19 released missing genetic modification characterization missing control alignments ENCFF951CQG bigBed narrowPeak peaks ENCSR091GVJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ATF1-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF077HXE 12841351 ENCODE Processing Pipeline b4446ffa3efe6a247a32ca6949bcb995 https://www.encodeproject.org/files/ENCFF951CQG/@@download/ENCFF951CQG.bigBed hg19 released missing genetic modification characterization missing control alignments ENCFF193SNN bigBed narrowPeak optimal idr thresholded peaks ENCSR091GVJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ATF1-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF232KAH 1704465 ENCODE Processing Pipeline dafd04d07f02350fdaf494b1abe5673d https://www.encodeproject.org/files/ENCFF193SNN/@@download/ENCFF193SNN.bigBed hg19 released missing genetic modification characterization missing control alignments ENCFF695KCX bigWig signal p-value ENCSR091GVJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ATF1-human ENCAB728YTO DNA False 2016-01-14 ENCODE 2 ENCFF774NMX, ENCFF800DAY 1136984736 ENCODE Processing Pipeline e736b814259c07d8c1d1b3d93dd4ad4c https://www.encodeproject.org/files/ENCFF695KCX/@@download/ENCFF695KCX.bigWig hg19 released missing genetic modification characterization missing control alignments ENCFF246FAV fastq reads ENCSR479QAJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens U2AF2-human ENCAB511TCT DNA SDS formaldehyde False 2017-02-27 ENCODE 1 1 40 single-ended 517346057 Xiang-Dong Fu, UCSD 100afcf3d421f5cd6a1bc999a400bdaa SRA:SRR6213701 https://www.encodeproject.org/files/ENCFF246FAV/@@download/ENCFF246FAV.fastq.gz Illumina HiSeq 2000 /files/ENCFF025UQF/ released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length ENCFF266IUJ fastq reads ENCSR479QAJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens U2AF2-human ENCAB511TCT DNA SDS formaldehyde False 2017-02-27 ENCODE 2 1 40 single-ended 621641335 Xiang-Dong Fu, UCSD ea1124efdd805cd279de2c824f516ff4 SRA:SRR6213702 https://www.encodeproject.org/files/ENCFF266IUJ/@@download/ENCFF266IUJ.fastq.gz Illumina HiSeq 2500 /files/ENCFF201ZVH/ released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length ENCFF878LXV bam unfiltered alignments ENCSR479QAJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens U2AF2-human ENCAB511TCT DNA SDS formaldehyde False 2017-02-27 ENCODE 1 40 ENCFF246FAV, ENCFF807MUK 679291737 ENCODE Processing Pipeline fa3f64c15698b5f6fb7d1905e737e982 https://www.encodeproject.org/files/ENCFF878LXV/@@download/ENCFF878LXV.bam hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length ENCFF277QYK bam alignments ENCSR479QAJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens U2AF2-human ENCAB511TCT DNA SDS formaldehyde False 2017-02-27 ENCODE 1 40 ENCFF246FAV, ENCFF807MUK 421515628 ENCODE Processing Pipeline 2d00a30af1bca9c52273b4610259bc13 https://www.encodeproject.org/files/ENCFF277QYK/@@download/ENCFF277QYK.bam hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length ENCFF763SGF bam alignments ENCSR479QAJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens U2AF2-human ENCAB511TCT DNA SDS formaldehyde False 2017-02-27 ENCODE 2 40 ENCFF266IUJ, ENCFF807MUK 520264004 ENCODE Processing Pipeline 014216ca4309426a0d6448c5adbb224a https://www.encodeproject.org/files/ENCFF763SGF/@@download/ENCFF763SGF.bam hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length ENCFF762SBP bam unfiltered alignments ENCSR479QAJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens U2AF2-human ENCAB511TCT DNA SDS formaldehyde False 2017-02-27 ENCODE 1 40 ENCFF246FAV, ENCFF643CGH 681643423 ENCODE Processing Pipeline 9e8d5cfd350881fb083b9ec2e00a88c6 https://www.encodeproject.org/files/ENCFF762SBP/@@download/ENCFF762SBP.bam GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length ENCFF618RVW bam unfiltered alignments ENCSR479QAJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens U2AF2-human ENCAB511TCT DNA SDS formaldehyde False 2017-02-27 ENCODE 2 40 ENCFF266IUJ, ENCFF807MUK 819892932 ENCODE Processing Pipeline 0f4cae0a1e7899195110c82dfdcffdbc https://www.encodeproject.org/files/ENCFF618RVW/@@download/ENCFF618RVW.bam hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length ENCFF762TAN bam alignments ENCSR479QAJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens U2AF2-human ENCAB511TCT DNA SDS formaldehyde False 2017-02-27 ENCODE 1 40 ENCFF246FAV, ENCFF643CGH 421170978 ENCODE Processing Pipeline 2a3f506ec2f6213f91ec749ae90a45ed https://www.encodeproject.org/files/ENCFF762TAN/@@download/ENCFF762TAN.bam GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length ENCFF401PIJ bam alignments ENCSR479QAJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens U2AF2-human ENCAB511TCT DNA SDS formaldehyde False 2017-02-27 ENCODE 2 40 ENCFF266IUJ, ENCFF643CGH 519868699 ENCODE Processing Pipeline 509147df2e84fb66060def73d9d96afe https://www.encodeproject.org/files/ENCFF401PIJ/@@download/ENCFF401PIJ.bam GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length ENCFF836KLS bam unfiltered alignments ENCSR479QAJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens U2AF2-human ENCAB511TCT DNA SDS formaldehyde False 2017-02-27 ENCODE 2 40 ENCFF266IUJ, ENCFF643CGH 822990376 ENCODE Processing Pipeline c2112f1605daa7f8e37d685bb61cff6c https://www.encodeproject.org/files/ENCFF836KLS/@@download/ENCFF836KLS.bam GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length ENCFF265DVZ bigWig signal p-value ENCSR479QAJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens U2AF2-human ENCAB511TCT DNA SDS formaldehyde False 2017-02-27 ENCODE 1 ENCFF277QYK, ENCFF477SGV 476893688 ENCODE Processing Pipeline e25310dc1c974c467567436024ef34d0 https://www.encodeproject.org/files/ENCFF265DVZ/@@download/ENCFF265DVZ.bigWig hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length ENCFF982EOG bigWig signal p-value ENCSR479QAJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens U2AF2-human ENCAB511TCT DNA SDS formaldehyde False 2017-02-27 ENCODE 2 ENCFF705ZEH, ENCFF763SGF 389413173 ENCODE Processing Pipeline 5a97c7ed9c88196587442e273781647e https://www.encodeproject.org/files/ENCFF982EOG/@@download/ENCFF982EOG.bigWig hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length ENCFF483OPS bed narrowPeak peaks ENCSR479QAJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens U2AF2-human ENCAB511TCT DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF277QYK, ENCFF477SGV, ENCFF705ZEH, ENCFF763SGF 6606501 ENCODE Processing Pipeline f989fb04464a87a582f7f149a97c6a87 https://www.encodeproject.org/files/ENCFF483OPS/@@download/ENCFF483OPS.bed.gz hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length ENCFF027JQE bigBed narrowPeak peaks ENCSR479QAJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens U2AF2-human ENCAB511TCT DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF483OPS 13154638 ENCODE Processing Pipeline e242ffe570c49cdb303809c4ffbd6087 https://www.encodeproject.org/files/ENCFF027JQE/@@download/ENCFF027JQE.bigBed hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length ENCFF232JTU bigBed narrowPeak peaks ENCSR479QAJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens U2AF2-human ENCAB511TCT DNA SDS formaldehyde False 2017-02-27 ENCODE 2 ENCFF625DLL 12973955 ENCODE Processing Pipeline b3873625bfa5d9574536f35e8dedfc1f https://www.encodeproject.org/files/ENCFF232JTU/@@download/ENCFF232JTU.bigBed hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length ENCFF015FMA bigWig fold change over control ENCSR479QAJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens U2AF2-human ENCAB511TCT DNA SDS formaldehyde False 2017-02-27 ENCODE 2 ENCFF705ZEH, ENCFF763SGF 288694026 ENCODE Processing Pipeline f55a1eec7e938116125a2fc2e6ada84e https://www.encodeproject.org/files/ENCFF015FMA/@@download/ENCFF015FMA.bigWig hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length ENCFF822WFQ bed narrowPeak peaks ENCSR479QAJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens U2AF2-human ENCAB511TCT DNA SDS formaldehyde False 2017-02-27 ENCODE 1 ENCFF277QYK, ENCFF477SGV 4658233 ENCODE Processing Pipeline 878975b13bc47e7307609fc440a60b24 https://www.encodeproject.org/files/ENCFF822WFQ/@@download/ENCFF822WFQ.bed.gz hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length ENCFF625DLL bed narrowPeak peaks ENCSR479QAJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens U2AF2-human ENCAB511TCT DNA SDS formaldehyde False 2017-02-27 ENCODE 2 ENCFF705ZEH, ENCFF763SGF 5167937 ENCODE Processing Pipeline 993512bb20f3eefb5731f9d5dc7a5701 https://www.encodeproject.org/files/ENCFF625DLL/@@download/ENCFF625DLL.bed.gz hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length ENCFF615WNQ bigBed narrowPeak peaks ENCSR479QAJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens U2AF2-human ENCAB511TCT DNA SDS formaldehyde False 2017-02-27 ENCODE 1 ENCFF822WFQ 12773782 ENCODE Processing Pipeline 14ae62f12ef6bbef83745142a6d8c557 https://www.encodeproject.org/files/ENCFF615WNQ/@@download/ENCFF615WNQ.bigBed hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length ENCFF899DUS bigBed narrowPeak optimal idr thresholded peaks ENCSR479QAJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens U2AF2-human ENCAB511TCT DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF398EQF 83061 ENCODE Processing Pipeline 4e5b3c71785e9ea9a538e0b2e64f95d3 https://www.encodeproject.org/files/ENCFF899DUS/@@download/ENCFF899DUS.bigBed hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length ENCFF757MVK bigWig fold change over control ENCSR479QAJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens U2AF2-human ENCAB511TCT DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF277QYK, ENCFF477SGV, ENCFF705ZEH, ENCFF763SGF 610172760 ENCODE Processing Pipeline 151fad9e42d3c794ee3761e4180a18ad https://www.encodeproject.org/files/ENCFF757MVK/@@download/ENCFF757MVK.bigWig hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length ENCFF398EQF bed narrowPeak optimal idr thresholded peaks ENCSR479QAJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens U2AF2-human ENCAB511TCT DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF001TDO, ENCFF483OPS, ENCFF625DLL, ENCFF822WFQ 2627 ENCODE Processing Pipeline 19e5d6b9e2057d0d4abbb65736d1ed41 https://www.encodeproject.org/files/ENCFF398EQF/@@download/ENCFF398EQF.bed.gz hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length ENCFF589ZXE bigWig signal p-value ENCSR479QAJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens U2AF2-human ENCAB511TCT DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF277QYK, ENCFF477SGV, ENCFF705ZEH, ENCFF763SGF 779146328 ENCODE Processing Pipeline 9a1fef31c7eb6d559f41719b98b8ec32 https://www.encodeproject.org/files/ENCFF589ZXE/@@download/ENCFF589ZXE.bigWig hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length ENCFF220HWQ bigWig fold change over control ENCSR479QAJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens U2AF2-human ENCAB511TCT DNA SDS formaldehyde False 2017-02-27 ENCODE 1 ENCFF277QYK, ENCFF477SGV 246950910 ENCODE Processing Pipeline 4a4d0c3de6f6893d989a77a3a78b16c0 https://www.encodeproject.org/files/ENCFF220HWQ/@@download/ENCFF220HWQ.bigWig hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length ENCFF158UTC bed narrowPeak conservative idr thresholded peaks ENCSR479QAJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens U2AF2-human ENCAB511TCT DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF001TDO, ENCFF483OPS, ENCFF625DLL, ENCFF822WFQ 1732 ENCODE Processing Pipeline 50944a58277f3e170177b818980c2d61 https://www.encodeproject.org/files/ENCFF158UTC/@@download/ENCFF158UTC.bed.gz hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length ENCFF205VNR bigBed narrowPeak conservative idr thresholded peaks ENCSR479QAJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens U2AF2-human ENCAB511TCT DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF158UTC 79591 ENCODE Processing Pipeline 9e6cff7db5471c6892e797a9e0eefc15 https://www.encodeproject.org/files/ENCFF205VNR/@@download/ENCFF205VNR.bigBed hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length ENCFF417NBE bigWig signal p-value ENCSR479QAJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens U2AF2-human ENCAB511TCT DNA SDS formaldehyde False 2017-02-27 ENCODE 1 ENCFF308PSW, ENCFF762TAN 404248257 ENCODE Processing Pipeline fac932d965dc5523ff4630436ce78875 https://www.encodeproject.org/files/ENCFF417NBE/@@download/ENCFF417NBE.bigWig GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length ENCFF777URT bigWig signal p-value ENCSR479QAJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens U2AF2-human ENCAB511TCT DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF198JCQ, ENCFF308PSW, ENCFF401PIJ, ENCFF762TAN 736584615 ENCODE Processing Pipeline 5a664487933719f987cf15860db53d79 https://www.encodeproject.org/files/ENCFF777URT/@@download/ENCFF777URT.bigWig GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length ENCFF982KEW bigWig fold change over control ENCSR479QAJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens U2AF2-human ENCAB511TCT DNA SDS formaldehyde False 2017-02-27 ENCODE 1 ENCFF308PSW, ENCFF762TAN 243237993 ENCODE Processing Pipeline 38d46e7039a92570df04384f402e7440 https://www.encodeproject.org/files/ENCFF982KEW/@@download/ENCFF982KEW.bigWig GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length ENCFF426XGS bed narrowPeak peaks ENCSR479QAJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens U2AF2-human ENCAB511TCT DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF198JCQ, ENCFF308PSW, ENCFF401PIJ, ENCFF762TAN 6505182 ENCODE Processing Pipeline 99350262ac7943f9227e3cb0fa4ba347 https://www.encodeproject.org/files/ENCFF426XGS/@@download/ENCFF426XGS.bed.gz GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length ENCFF975GRW bigBed narrowPeak peaks ENCSR479QAJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens U2AF2-human ENCAB511TCT DNA SDS formaldehyde False 2017-02-27 ENCODE 2 ENCFF066HLE 12953173 ENCODE Processing Pipeline 7429bdb3ef3b8941765bbeaebf1dab57 https://www.encodeproject.org/files/ENCFF975GRW/@@download/ENCFF975GRW.bigBed GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length ENCFF304HRB bigWig signal p-value ENCSR479QAJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens U2AF2-human ENCAB511TCT DNA SDS formaldehyde False 2017-02-27 ENCODE 2 ENCFF198JCQ, ENCFF401PIJ 462450402 ENCODE Processing Pipeline 9e02c9acc4e45337abb0c2d4b6ffff84 https://www.encodeproject.org/files/ENCFF304HRB/@@download/ENCFF304HRB.bigWig GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length ENCFF484LUS bigWig fold change over control ENCSR479QAJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens U2AF2-human ENCAB511TCT DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF198JCQ, ENCFF308PSW, ENCFF401PIJ, ENCFF762TAN 607974366 ENCODE Processing Pipeline eeb0ce2376653efebf1f2f27e65a2d9c https://www.encodeproject.org/files/ENCFF484LUS/@@download/ENCFF484LUS.bigWig GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length ENCFF066HLE bed narrowPeak peaks ENCSR479QAJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens U2AF2-human ENCAB511TCT DNA SDS formaldehyde False 2017-02-27 ENCODE 2 ENCFF198JCQ, ENCFF401PIJ 4982431 ENCODE Processing Pipeline 15e59b05b5928d30eda2613bc93d46c8 https://www.encodeproject.org/files/ENCFF066HLE/@@download/ENCFF066HLE.bed.gz GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length ENCFF148QJF bigWig fold change over control ENCSR479QAJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens U2AF2-human ENCAB511TCT DNA SDS formaldehyde False 2017-02-27 ENCODE 2 ENCFF198JCQ, ENCFF401PIJ 288394095 ENCODE Processing Pipeline 1c512f2ffa69c545dfaa7b8057ff9a7e https://www.encodeproject.org/files/ENCFF148QJF/@@download/ENCFF148QJF.bigWig GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length ENCFF570EIH bed narrowPeak peaks ENCSR479QAJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens U2AF2-human ENCAB511TCT DNA SDS formaldehyde False 2017-02-27 ENCODE 1 ENCFF308PSW, ENCFF762TAN 4821490 ENCODE Processing Pipeline 4ecdb1a295234ecf76211fcaf3b89633 https://www.encodeproject.org/files/ENCFF570EIH/@@download/ENCFF570EIH.bed.gz GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length ENCFF835UTB bigBed narrowPeak peaks ENCSR479QAJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens U2AF2-human ENCAB511TCT DNA SDS formaldehyde False 2017-02-27 ENCODE 1 ENCFF570EIH 12876026 ENCODE Processing Pipeline 8867356d2d38f35126cc33b5a193b385 https://www.encodeproject.org/files/ENCFF835UTB/@@download/ENCFF835UTB.bigBed GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length ENCFF320ATP bigBed narrowPeak peaks ENCSR479QAJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens U2AF2-human ENCAB511TCT DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF426XGS 13197557 ENCODE Processing Pipeline 06e90cdd79392c927a7912391a250585 https://www.encodeproject.org/files/ENCFF320ATP/@@download/ENCFF320ATP.bigBed GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length ENCFF904KHM bed narrowPeak conservative idr thresholded peaks ENCSR479QAJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens U2AF2-human ENCAB511TCT DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF066HLE, ENCFF419RSJ, ENCFF426XGS, ENCFF570EIH 2119 ENCODE Processing Pipeline a1de03cec7e8355db6639fc516bab94c https://www.encodeproject.org/files/ENCFF904KHM/@@download/ENCFF904KHM.bed.gz GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length ENCFF244ZQC bigBed narrowPeak optimal idr thresholded peaks ENCSR479QAJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens U2AF2-human ENCAB511TCT DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF134HBP 83416 ENCODE Processing Pipeline d283b80fe9c674e8a0918abf3105efd4 https://www.encodeproject.org/files/ENCFF244ZQC/@@download/ENCFF244ZQC.bigBed GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length ENCFF134HBP bed narrowPeak optimal idr thresholded peaks ENCSR479QAJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens U2AF2-human ENCAB511TCT DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF066HLE, ENCFF419RSJ, ENCFF426XGS, ENCFF570EIH 2589 ENCODE Processing Pipeline b2b9461da7b80c05b72cd1f582905da4 https://www.encodeproject.org/files/ENCFF134HBP/@@download/ENCFF134HBP.bed.gz GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length ENCFF731VBL bigBed narrowPeak conservative idr thresholded peaks ENCSR479QAJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens U2AF2-human ENCAB511TCT DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF904KHM 81762 ENCODE Processing Pipeline 447f058703735ecf3706ed67787fd11f https://www.encodeproject.org/files/ENCFF731VBL/@@download/ENCFF731VBL.bigBed GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length ENCFF645ZWB fastq reads ENCSR632TJQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ILF3-human ENCAB201MQH DNA False 2018-02-14 ENCODE 2 1 100 paired-ended 1 ENCFF981WLR 2691280027 Michael Snyder, Stanford d8cd74832f97f04a05635c2205883bec https://www.encodeproject.org/files/ENCFF645ZWB/@@download/ENCFF645ZWB.fastq.gz Illumina HiSeq 4000 /files/ENCFF259GQA/ archived borderline replicate concordance, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity experiment not submitted to GEO, NTR biosample ENCFF182MTO fastq reads ENCSR632TJQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ILF3-human ENCAB201MQH DNA False 2018-02-14 ENCODE 1 1 100 paired-ended 1 ENCFF949NMY 2543029571 Michael Snyder, Stanford 59f8c9a20dac6c6d666bb32ff2ffc3d2 https://www.encodeproject.org/files/ENCFF182MTO/@@download/ENCFF182MTO.fastq.gz Illumina HiSeq 4000 /files/ENCFF498JMO/ released borderline replicate concordance, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity experiment not submitted to GEO, NTR biosample ENCFF949NMY fastq reads ENCSR632TJQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ILF3-human ENCAB201MQH DNA False 2018-02-14 ENCODE 1 1 100 paired-ended 2 ENCFF182MTO 2968698329 Michael Snyder, Stanford 48f52bfbb602d0cfddc60335b6e3ad81 https://www.encodeproject.org/files/ENCFF949NMY/@@download/ENCFF949NMY.fastq.gz Illumina HiSeq 4000 /files/ENCFF502GTS/ released borderline replicate concordance, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity experiment not submitted to GEO, NTR biosample ENCFF981WLR fastq reads ENCSR632TJQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ILF3-human ENCAB201MQH DNA False 2018-02-14 ENCODE 2 1 100 paired-ended 2 ENCFF645ZWB 3107278693 Michael Snyder, Stanford 6a333358f668fa6dbfc688dff8e8fee9 https://www.encodeproject.org/files/ENCFF981WLR/@@download/ENCFF981WLR.fastq.gz Illumina HiSeq 4000 /files/ENCFF837MIV/ archived borderline replicate concordance, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity experiment not submitted to GEO, NTR biosample ENCFF464FKU bam unfiltered alignments ENCSR632TJQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ILF3-human ENCAB201MQH DNA False 2018-02-14 ENCODE 2 100 ENCFF645ZWB, ENCFF807MUK, ENCFF981WLR 5452833770 ENCODE Processing Pipeline 5bac3e78a64ed0408b91f9cbdc248398 https://www.encodeproject.org/files/ENCFF464FKU/@@download/ENCFF464FKU.bam hg19 archived borderline replicate concordance, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity experiment not submitted to GEO, NTR biosample ENCFF737ZPI bam unfiltered alignments ENCSR632TJQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ILF3-human ENCAB201MQH DNA False 2018-02-14 ENCODE 1 100 ENCFF182MTO, ENCFF643CGH, ENCFF949NMY 5296226188 ENCODE Processing Pipeline f65f4eaec3c3e08d21f13c33f02d9ca7 https://www.encodeproject.org/files/ENCFF737ZPI/@@download/ENCFF737ZPI.bam GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity experiment not submitted to GEO, NTR biosample ENCFF070LXT bam unfiltered alignments ENCSR632TJQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ILF3-human ENCAB201MQH DNA False 2018-02-14 ENCODE 2 100 ENCFF643CGH, ENCFF645ZWB, ENCFF981WLR 5456107382 ENCODE Processing Pipeline a0438e43c6be2d24a4ecff7503b2b37d https://www.encodeproject.org/files/ENCFF070LXT/@@download/ENCFF070LXT.bam GRCh38 archived borderline replicate concordance, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity experiment not submitted to GEO, NTR biosample ENCFF775NRI bam unfiltered alignments ENCSR632TJQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ILF3-human ENCAB201MQH DNA False 2018-02-14 ENCODE 1 100 ENCFF182MTO, ENCFF807MUK, ENCFF949NMY 5292119725 ENCODE Processing Pipeline 2b7b65b0a13e019c3a22d56c06326a4b https://www.encodeproject.org/files/ENCFF775NRI/@@download/ENCFF775NRI.bam hg19 released borderline replicate concordance, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity experiment not submitted to GEO, NTR biosample ENCFF545VWH bam alignments ENCSR632TJQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ILF3-human ENCAB201MQH DNA False 2018-02-14 ENCODE 2 100 ENCFF643CGH, ENCFF645ZWB, ENCFF981WLR 4241609428 ENCODE Processing Pipeline f4ad96632c7da33b1cb4d1bedc304f15 https://www.encodeproject.org/files/ENCFF545VWH/@@download/ENCFF545VWH.bam GRCh38 archived borderline replicate concordance, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity experiment not submitted to GEO, NTR biosample ENCFF528VXT bam alignments ENCSR632TJQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ILF3-human ENCAB201MQH DNA False 2018-02-14 ENCODE 1 100 ENCFF182MTO, ENCFF807MUK, ENCFF949NMY 4147694795 ENCODE Processing Pipeline 4c6f735db482b3dd93d76883912b96d4 https://www.encodeproject.org/files/ENCFF528VXT/@@download/ENCFF528VXT.bam hg19 released borderline replicate concordance, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity experiment not submitted to GEO, NTR biosample ENCFF863PZB bam alignments ENCSR632TJQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ILF3-human ENCAB201MQH DNA False 2018-02-14 ENCODE 1 100 ENCFF182MTO, ENCFF643CGH, ENCFF949NMY 4149806588 ENCODE Processing Pipeline 011e170f30f95fb88050bc1178d9380d https://www.encodeproject.org/files/ENCFF863PZB/@@download/ENCFF863PZB.bam GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity experiment not submitted to GEO, NTR biosample ENCFF645IUN bam alignments ENCSR632TJQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ILF3-human ENCAB201MQH DNA False 2018-02-14 ENCODE 2 100 ENCFF645ZWB, ENCFF807MUK, ENCFF981WLR 4239610524 ENCODE Processing Pipeline 1a9f8f4e7feea3e51fa62773b8afe393 https://www.encodeproject.org/files/ENCFF645IUN/@@download/ENCFF645IUN.bam hg19 archived borderline replicate concordance, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity experiment not submitted to GEO, NTR biosample ENCFF175FRR bigWig fold change over control ENCSR632TJQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ILF3-human ENCAB201MQH DNA False 2018-02-14 ENCODE 2 ENCFF645IUN, ENCFF834TUP 1441738690 ENCODE Processing Pipeline 605d5339854c28ca6ccc3345ac8aff36 https://www.encodeproject.org/files/ENCFF175FRR/@@download/ENCFF175FRR.bigWig hg19 archived borderline replicate concordance, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity experiment not submitted to GEO, NTR biosample ENCFF186DSR bigWig signal p-value ENCSR632TJQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ILF3-human ENCAB201MQH DNA False 2018-02-14 ENCODE 1 ENCFF160VXC, ENCFF528VXT 1319380798 ENCODE Processing Pipeline 81a9efcdafdee6501828bdc78c969a70 https://www.encodeproject.org/files/ENCFF186DSR/@@download/ENCFF186DSR.bigWig hg19 released borderline replicate concordance, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity experiment not submitted to GEO, NTR biosample ENCFF432GQX bigWig fold change over control ENCSR632TJQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ILF3-human ENCAB201MQH DNA False 2018-02-14 ENCODE 1 ENCFF160VXC, ENCFF528VXT 1387366855 ENCODE Processing Pipeline dacbc9779e87317472213389a7ef06f1 https://www.encodeproject.org/files/ENCFF432GQX/@@download/ENCFF432GQX.bigWig hg19 released borderline replicate concordance, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity experiment not submitted to GEO, NTR biosample ENCFF464HGH bigWig signal p-value ENCSR632TJQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ILF3-human ENCAB201MQH DNA False 2018-02-14 ENCODE 2 ENCFF645IUN, ENCFF834TUP 1197283018 ENCODE Processing Pipeline 2e7a8bcc1b40280d0b792bae755ec953 https://www.encodeproject.org/files/ENCFF464HGH/@@download/ENCFF464HGH.bigWig hg19 archived borderline replicate concordance, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity experiment not submitted to GEO, NTR biosample ENCFF588BMT bed narrowPeak peaks ENCSR632TJQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ILF3-human ENCAB201MQH DNA False 2018-02-14 ENCODE 2 ENCFF645IUN, ENCFF834TUP 6948885 ENCODE Processing Pipeline b5cafb3c8c8896bbb798add0a04cb77c https://www.encodeproject.org/files/ENCFF588BMT/@@download/ENCFF588BMT.bed.gz hg19 archived borderline replicate concordance, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity experiment not submitted to GEO, NTR biosample ENCFF981CYM bigBed narrowPeak peaks ENCSR632TJQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ILF3-human ENCAB201MQH DNA False 2018-02-14 ENCODE 1 ENCFF440OYN 11047103 ENCODE Processing Pipeline 6c08d2bbc428879889cc2c87d5f9b17d https://www.encodeproject.org/files/ENCFF981CYM/@@download/ENCFF981CYM.bigBed GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity experiment not submitted to GEO, NTR biosample ENCFF282AHE bigBed narrowPeak peaks ENCSR632TJQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ILF3-human ENCAB201MQH DNA False 2018-02-14 ENCODE 2 ENCFF977RPN 12980865 ENCODE Processing Pipeline 05bca62930128e46b40b4e1b4bd4f61f https://www.encodeproject.org/files/ENCFF282AHE/@@download/ENCFF282AHE.bigBed GRCh38 archived borderline replicate concordance, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity experiment not submitted to GEO, NTR biosample ENCFF766GRS bigWig fold change over control ENCSR632TJQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ILF3-human ENCAB201MQH DNA False 2018-02-14 ENCODE 2 ENCFF545VWH 1410039142 ENCODE Processing Pipeline 7828ab2ba98bab48aaad886077c4a87d https://www.encodeproject.org/files/ENCFF766GRS/@@download/ENCFF766GRS.bigWig GRCh38 archived borderline replicate concordance, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity experiment not submitted to GEO, NTR biosample ENCFF041LFH bigBed narrowPeak peaks ENCSR632TJQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ILF3-human ENCAB201MQH DNA False 2018-02-14 ENCODE 1 ENCFF967XPK 11036082 ENCODE Processing Pipeline a6ec190889a210d7d380d2781dd3b7b2 https://www.encodeproject.org/files/ENCFF041LFH/@@download/ENCFF041LFH.bigBed hg19 released borderline replicate concordance, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity experiment not submitted to GEO, NTR biosample ENCFF588PRG bigBed narrowPeak peaks ENCSR632TJQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ILF3-human ENCAB201MQH DNA False 2018-02-14 ENCODE 2 ENCFF588BMT 12972489 ENCODE Processing Pipeline 58f644e65a99ae9d997ff56041277efa https://www.encodeproject.org/files/ENCFF588PRG/@@download/ENCFF588PRG.bigBed hg19 archived borderline replicate concordance, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity experiment not submitted to GEO, NTR biosample ENCFF342XBC bigWig signal p-value ENCSR632TJQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ILF3-human ENCAB201MQH DNA False 2018-02-14 ENCODE 2 ENCFF545VWH 1365520192 ENCODE Processing Pipeline d5b9e00b84ec332f5ed1f68567873042 https://www.encodeproject.org/files/ENCFF342XBC/@@download/ENCFF342XBC.bigWig GRCh38 archived borderline replicate concordance, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity experiment not submitted to GEO, NTR biosample ENCFF977RPN bed narrowPeak peaks ENCSR632TJQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ILF3-human ENCAB201MQH DNA False 2018-02-14 ENCODE 2 ENCFF545VWH 6950595 ENCODE Processing Pipeline ca872ff5bc8753830bc3d8309e1c471d https://www.encodeproject.org/files/ENCFF977RPN/@@download/ENCFF977RPN.bed.gz GRCh38 archived borderline replicate concordance, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity experiment not submitted to GEO, NTR biosample ENCFF481GDK bigWig signal p-value ENCSR632TJQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ILF3-human ENCAB201MQH DNA False 2018-02-14 ENCODE 1 ENCFF790TAN, ENCFF863PZB 1264587070 ENCODE Processing Pipeline 31e582e9c70bf2b0c186b7d31cd0f676 https://www.encodeproject.org/files/ENCFF481GDK/@@download/ENCFF481GDK.bigWig GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity experiment not submitted to GEO, NTR biosample ENCFF440OYN bed narrowPeak peaks ENCSR632TJQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ILF3-human ENCAB201MQH DNA False 2018-02-14 ENCODE 1 ENCFF790TAN, ENCFF863PZB 6702851 ENCODE Processing Pipeline 735dc5a0662d124ddd4c8bc9230d012b https://www.encodeproject.org/files/ENCFF440OYN/@@download/ENCFF440OYN.bed.gz GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity experiment not submitted to GEO, NTR biosample ENCFF166CQM bigWig fold change over control ENCSR632TJQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ILF3-human ENCAB201MQH DNA False 2018-02-14 ENCODE 1 ENCFF790TAN, ENCFF863PZB 1395350376 ENCODE Processing Pipeline f8df9d8b7180af09f13b3f89122e9931 https://www.encodeproject.org/files/ENCFF166CQM/@@download/ENCFF166CQM.bigWig GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity experiment not submitted to GEO, NTR biosample ENCFF871MFF fastq reads ENCSR632TJQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ILF3-human ENCAB201MQH DNA False 2018-02-14 ENCODE 4 1 101 paired-ended 1 ENCFF656SJN 2477844521 Michael Snyder, Stanford ad0b060b9e7802daf517e20ee6eb6b90 https://www.encodeproject.org/files/ENCFF871MFF/@@download/ENCFF871MFF.fastq.gz Illumina HiSeq 4000 /files/ENCFF259GQA/ released borderline replicate concordance, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity experiment not submitted to GEO, NTR biosample ENCFF656SJN fastq reads ENCSR632TJQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ILF3-human ENCAB201MQH DNA False 2018-02-14 ENCODE 4 1 101 paired-ended 2 ENCFF871MFF 2672337679 Michael Snyder, Stanford 94d2e67d93d779b0c1a16a3b93124e16 https://www.encodeproject.org/files/ENCFF656SJN/@@download/ENCFF656SJN.fastq.gz Illumina HiSeq 4000 /files/ENCFF837MIV/ released borderline replicate concordance, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity experiment not submitted to GEO, NTR biosample ENCFF209IOA bam unfiltered alignments ENCSR632TJQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ILF3-human ENCAB201MQH DNA False 2018-02-14 ENCODE 4 101 ENCFF643CGH, ENCFF656SJN, ENCFF871MFF 4690111088 ENCODE Processing Pipeline 194aad6f1a92a0cb7a654946811ec053 https://www.encodeproject.org/files/ENCFF209IOA/@@download/ENCFF209IOA.bam GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity experiment not submitted to GEO, NTR biosample ENCFF249JKL bam alignments ENCSR632TJQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ILF3-human ENCAB201MQH DNA False 2018-02-14 ENCODE 4 101 ENCFF643CGH, ENCFF656SJN, ENCFF871MFF 3473675770 ENCODE Processing Pipeline ab43157536fbdcef88c17e8a49e2c530 https://www.encodeproject.org/files/ENCFF249JKL/@@download/ENCFF249JKL.bam GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity experiment not submitted to GEO, NTR biosample ENCFF416IBC bam unfiltered alignments ENCSR632TJQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ILF3-human ENCAB201MQH DNA False 2018-02-14 ENCODE 4 101 ENCFF656SJN, ENCFF807MUK, ENCFF871MFF 4685658564 ENCODE Processing Pipeline 5342f4962aa7a37d4566020311b873e6 https://www.encodeproject.org/files/ENCFF416IBC/@@download/ENCFF416IBC.bam hg19 released borderline replicate concordance, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity experiment not submitted to GEO, NTR biosample ENCFF023ADT bam alignments ENCSR632TJQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ILF3-human ENCAB201MQH DNA False 2018-02-14 ENCODE 4 101 ENCFF656SJN, ENCFF807MUK, ENCFF871MFF 3472279666 ENCODE Processing Pipeline f6a180acdbe4f0ee94d79b99c0b130c5 https://www.encodeproject.org/files/ENCFF023ADT/@@download/ENCFF023ADT.bam hg19 released borderline replicate concordance, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity experiment not submitted to GEO, NTR biosample ENCFF316TMQ bigWig signal p-value ENCSR632TJQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ILF3-human ENCAB201MQH DNA False 2018-02-14 ENCODE 1, 4 ENCFF249JKL, ENCFF712WXB, ENCFF790TAN, ENCFF863PZB 1903989249 ENCODE Processing Pipeline 2c8309a2ad6d6d76c15c06d211817ec5 https://www.encodeproject.org/files/ENCFF316TMQ/@@download/ENCFF316TMQ.bigWig GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity experiment not submitted to GEO, NTR biosample ENCFF455FXG bed narrowPeak peaks ENCSR632TJQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ILF3-human ENCAB201MQH DNA False 2018-02-14 ENCODE 1, 4 ENCFF249JKL, ENCFF712WXB, ENCFF790TAN, ENCFF863PZB 7149590 ENCODE Processing Pipeline 8bcf07700d91dffd9219b17ab9bfde96 https://www.encodeproject.org/files/ENCFF455FXG/@@download/ENCFF455FXG.bed.gz GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity experiment not submitted to GEO, NTR biosample ENCFF368AAQ bed narrowPeak optimal idr thresholded peaks ENCSR632TJQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ILF3-human ENCAB201MQH DNA False 2018-02-14 ENCODE 1, 4 ENCFF419RSJ, ENCFF440OYN, ENCFF455FXG, ENCFF714ILF 90535 ENCODE Processing Pipeline 03f379d7fd255fffe332f35e2c73795f https://www.encodeproject.org/files/ENCFF368AAQ/@@download/ENCFF368AAQ.bed.gz GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity experiment not submitted to GEO, NTR biosample ENCFF120KHN bigWig fold change over control ENCSR632TJQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ILF3-human ENCAB201MQH DNA False 2018-02-14 ENCODE 1, 4 ENCFF023ADT, ENCFF160VXC, ENCFF528VXT, ENCFF834TUP 2310499989 ENCODE Processing Pipeline 61cac14fab4b7fac3e0cc6d04a683f96 https://www.encodeproject.org/files/ENCFF120KHN/@@download/ENCFF120KHN.bigWig hg19 released borderline replicate concordance, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity experiment not submitted to GEO, NTR biosample ENCFF424YPR bigBed narrowPeak peaks ENCSR632TJQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ILF3-human ENCAB201MQH DNA False 2018-02-14 ENCODE 1, 4 ENCFF736TGQ 12954736 ENCODE Processing Pipeline aaedfd36c82a058854223e64bbc14d1e https://www.encodeproject.org/files/ENCFF424YPR/@@download/ENCFF424YPR.bigBed hg19 released borderline replicate concordance, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity experiment not submitted to GEO, NTR biosample ENCFF545CPY bed narrowPeak conservative idr thresholded peaks ENCSR632TJQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ILF3-human ENCAB201MQH DNA False 2018-02-14 ENCODE 1, 4 ENCFF001TDO, ENCFF632YKL, ENCFF736TGQ, ENCFF967XPK 30524 ENCODE Processing Pipeline 60b41b1f95dce150b724b6d208a31e63 https://www.encodeproject.org/files/ENCFF545CPY/@@download/ENCFF545CPY.bed.gz hg19 released borderline replicate concordance, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity experiment not submitted to GEO, NTR biosample ENCFF781JQK bigWig signal p-value ENCSR632TJQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ILF3-human ENCAB201MQH DNA False 2018-02-14 ENCODE 4 ENCFF249JKL, ENCFF712WXB 1346806480 ENCODE Processing Pipeline f47aa03f3ca3c866bfcd13dd0af0c220 https://www.encodeproject.org/files/ENCFF781JQK/@@download/ENCFF781JQK.bigWig GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity experiment not submitted to GEO, NTR biosample ENCFF791CMY bigWig fold change over control ENCSR632TJQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ILF3-human ENCAB201MQH DNA False 2018-02-14 ENCODE 4 ENCFF249JKL, ENCFF712WXB 1266270789 ENCODE Processing Pipeline 8bc33759ac6d8ddc943623ea509d6c14 https://www.encodeproject.org/files/ENCFF791CMY/@@download/ENCFF791CMY.bigWig GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity experiment not submitted to GEO, NTR biosample ENCFF210NDG bigWig fold change over control ENCSR632TJQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ILF3-human ENCAB201MQH DNA False 2018-02-14 ENCODE 1, 4 ENCFF249JKL, ENCFF712WXB, ENCFF790TAN, ENCFF863PZB 2309950476 ENCODE Processing Pipeline a0196bb4dcdfe26a0d725179b0fec1ea https://www.encodeproject.org/files/ENCFF210NDG/@@download/ENCFF210NDG.bigWig GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity experiment not submitted to GEO, NTR biosample ENCFF714ILF bed narrowPeak peaks ENCSR632TJQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ILF3-human ENCAB201MQH DNA False 2018-02-14 ENCODE 4 ENCFF249JKL, ENCFF712WXB 6309025 ENCODE Processing Pipeline fed567c7a3da32158aa3f30dca163734 https://www.encodeproject.org/files/ENCFF714ILF/@@download/ENCFF714ILF.bed.gz GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity experiment not submitted to GEO, NTR biosample ENCFF578RXG bigBed narrowPeak peaks ENCSR632TJQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ILF3-human ENCAB201MQH DNA False 2018-02-14 ENCODE 4 ENCFF714ILF 11125100 ENCODE Processing Pipeline 928091934658429eec4dc5ce9f73048d https://www.encodeproject.org/files/ENCFF578RXG/@@download/ENCFF578RXG.bigBed GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity experiment not submitted to GEO, NTR biosample ENCFF458ODL bigBed narrowPeak peaks ENCSR632TJQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ILF3-human ENCAB201MQH DNA False 2018-02-14 ENCODE 1, 4 ENCFF455FXG 12966597 ENCODE Processing Pipeline 3bbb2731b5c003ccaab5584673f2586e https://www.encodeproject.org/files/ENCFF458ODL/@@download/ENCFF458ODL.bigBed GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity experiment not submitted to GEO, NTR biosample ENCFF214GAI bed narrowPeak conservative idr thresholded peaks ENCSR632TJQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ILF3-human ENCAB201MQH DNA False 2018-02-14 ENCODE 1, 4 ENCFF419RSJ, ENCFF440OYN, ENCFF455FXG, ENCFF714ILF 30802 ENCODE Processing Pipeline 8e7b73538a939eba6ce288529ef4576a https://www.encodeproject.org/files/ENCFF214GAI/@@download/ENCFF214GAI.bed.gz GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity experiment not submitted to GEO, NTR biosample ENCFF493GBS bigBed narrowPeak conservative idr thresholded peaks ENCSR632TJQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ILF3-human ENCAB201MQH DNA False 2018-02-14 ENCODE 1, 4 ENCFF214GAI 121402 ENCODE Processing Pipeline dff07d68b550ac31729863f7c222bd40 https://www.encodeproject.org/files/ENCFF493GBS/@@download/ENCFF493GBS.bigBed GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity experiment not submitted to GEO, NTR biosample ENCFF941ACK bigBed narrowPeak optimal idr thresholded peaks ENCSR632TJQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ILF3-human ENCAB201MQH DNA False 2018-02-14 ENCODE 1, 4 ENCFF368AAQ 221177 ENCODE Processing Pipeline 134273fe9924f3c6e231f02e2418d86c https://www.encodeproject.org/files/ENCFF941ACK/@@download/ENCFF941ACK.bigBed GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity experiment not submitted to GEO, NTR biosample ENCFF041RTV bigWig signal p-value ENCSR632TJQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ILF3-human ENCAB201MQH DNA False 2018-02-14 ENCODE 4 ENCFF023ADT, ENCFF834TUP 1104308860 ENCODE Processing Pipeline 185fcc1f57455105d2ebe8bb6d3ad71d https://www.encodeproject.org/files/ENCFF041RTV/@@download/ENCFF041RTV.bigWig hg19 released borderline replicate concordance, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity experiment not submitted to GEO, NTR biosample ENCFF967XPK bed narrowPeak peaks ENCSR632TJQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ILF3-human ENCAB201MQH DNA False 2018-02-14 ENCODE 1 ENCFF160VXC, ENCFF528VXT 6699790 ENCODE Processing Pipeline 72163cc058f9eab1dd9b38183d499c79 https://www.encodeproject.org/files/ENCFF967XPK/@@download/ENCFF967XPK.bed.gz hg19 released borderline replicate concordance, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity experiment not submitted to GEO, NTR biosample ENCFF396EIY bigBed narrowPeak optimal idr thresholded peaks ENCSR632TJQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ILF3-human ENCAB201MQH DNA False 2018-02-14 ENCODE 1, 4 ENCFF415YPX 219831 ENCODE Processing Pipeline cd0c2f7b16a58dcaf10feb194c66f56d https://www.encodeproject.org/files/ENCFF396EIY/@@download/ENCFF396EIY.bigBed hg19 released borderline replicate concordance, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity experiment not submitted to GEO, NTR biosample ENCFF978LYT bigWig fold change over control ENCSR632TJQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ILF3-human ENCAB201MQH DNA False 2018-02-14 ENCODE 4 ENCFF023ADT, ENCFF834TUP 1245335808 ENCODE Processing Pipeline 29860ddba3b0e58351e77dc06988e178 https://www.encodeproject.org/files/ENCFF978LYT/@@download/ENCFF978LYT.bigWig hg19 released borderline replicate concordance, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity experiment not submitted to GEO, NTR biosample ENCFF736TGQ bed narrowPeak peaks ENCSR632TJQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ILF3-human ENCAB201MQH DNA False 2018-02-14 ENCODE 1, 4 ENCFF023ADT, ENCFF160VXC, ENCFF528VXT, ENCFF834TUP 7145887 ENCODE Processing Pipeline 88355f2ff4342a2d6a710873b0d66cf3 https://www.encodeproject.org/files/ENCFF736TGQ/@@download/ENCFF736TGQ.bed.gz hg19 released borderline replicate concordance, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity experiment not submitted to GEO, NTR biosample ENCFF110DIG bigBed narrowPeak peaks ENCSR632TJQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ILF3-human ENCAB201MQH DNA False 2018-02-14 ENCODE 4 ENCFF632YKL 11113217 ENCODE Processing Pipeline f356ce12e669a4cb8870f9330dbd98ce https://www.encodeproject.org/files/ENCFF110DIG/@@download/ENCFF110DIG.bigBed hg19 released borderline replicate concordance, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity experiment not submitted to GEO, NTR biosample ENCFF607JHW bigWig signal p-value ENCSR632TJQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ILF3-human ENCAB201MQH DNA False 2018-02-14 ENCODE 1, 4 ENCFF023ADT, ENCFF160VXC, ENCFF528VXT, ENCFF834TUP 2125364639 ENCODE Processing Pipeline 55e7ca355cceb58b7274d830dea89c82 https://www.encodeproject.org/files/ENCFF607JHW/@@download/ENCFF607JHW.bigWig hg19 released borderline replicate concordance, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity experiment not submitted to GEO, NTR biosample ENCFF632YKL bed narrowPeak peaks ENCSR632TJQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ILF3-human ENCAB201MQH DNA False 2018-02-14 ENCODE 4 ENCFF023ADT, ENCFF834TUP 6307917 ENCODE Processing Pipeline 7f8409e86ae780a6e98d2fce8a97f178 https://www.encodeproject.org/files/ENCFF632YKL/@@download/ENCFF632YKL.bed.gz hg19 released borderline replicate concordance, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity experiment not submitted to GEO, NTR biosample ENCFF167LPU bigBed narrowPeak conservative idr thresholded peaks ENCSR632TJQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ILF3-human ENCAB201MQH DNA False 2018-02-14 ENCODE 1, 4 ENCFF545CPY 119319 ENCODE Processing Pipeline 8aa8283869ff0a3838869b78b5e7f517 https://www.encodeproject.org/files/ENCFF167LPU/@@download/ENCFF167LPU.bigBed hg19 released borderline replicate concordance, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity experiment not submitted to GEO, NTR biosample ENCFF415YPX bed narrowPeak optimal idr thresholded peaks ENCSR632TJQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ILF3-human ENCAB201MQH DNA False 2018-02-14 ENCODE 1, 4 ENCFF001TDO, ENCFF632YKL, ENCFF736TGQ, ENCFF967XPK 90857 ENCODE Processing Pipeline aefb4c3c8bd38bb09052056dc9ef8edd https://www.encodeproject.org/files/ENCFF415YPX/@@download/ENCFF415YPX.bed.gz hg19 released borderline replicate concordance, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity experiment not submitted to GEO, NTR biosample ENCFF000YRE bam alignments ENCSR000EGL ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour IRF1-human ENCAB000AHX DNA see document see document False 2012-05-14 ENCODE 1 1 634295230 Michael Snyder, Stanford 81f9cfe9e777901c0d34af4d71f6dc1e https://www.encodeproject.org/files/ENCFF000YRE/@@download/ENCFF000YRE.bam hg19 archived control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample, missing derived_from ENCFF000YRF bam alignments ENCSR000EGL ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour IRF1-human ENCAB000AHX DNA see document see document False 2012-05-14 ENCODE 2 1 645739223 Michael Snyder, Stanford 3dbe3a88e17fd0b9ab18bd5c28988e69 https://www.encodeproject.org/files/ENCFF000YRF/@@download/ENCFF000YRF.bam hg19 archived control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample, missing derived_from ENCFF000YRG bigBed narrowPeak peaks ENCSR000EGL ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour IRF1-human ENCAB000AHX DNA see document see document False 2012-05-14 ENCODE ENCFF001VNL 1620136 Michael Snyder, Stanford a07888cac8da7918f83cedb706fab786 https://www.encodeproject.org/files/ENCFF000YRG/@@download/ENCFF000YRG.bigBed hg19 archived control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample ENCFF000YRH fastq reads ENCSR000EGL ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour IRF1-human ENCAB000AHX DNA see document see document False 2012-05-14 ENCODE 1 1 36 single-ended 1165317779 Michael Snyder, Stanford 27fe14abc081794953d467d2401cd6f9 https://www.encodeproject.org/files/ENCFF000YRH/@@download/ENCFF000YRH.fastq.gz Illumina Genome Analyzer /files/ENCFF000YPF/ released control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample ENCFF000YRJ fastq reads ENCSR000EGL ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour IRF1-human ENCAB000AHX DNA see document see document False 2012-05-14 ENCODE 2 1 36 single-ended 1125221848 Michael Snyder, Stanford 73690fc4dee3e5b3612cb9bfd4ebcbe4 https://www.encodeproject.org/files/ENCFF000YRJ/@@download/ENCFF000YRJ.fastq.gz Illumina Genome Analyzer /files/ENCFF000YPF/ released control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample ENCFF000YRL bigWig signal ENCSR000EGL ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour IRF1-human ENCAB000AHX DNA see document see document False 2012-05-14 ENCODE 441660879 Michael Snyder, Stanford 57a385d4e51b4dfc11a7755b59b95346 https://www.encodeproject.org/files/ENCFF000YRL/@@download/ENCFF000YRL.bigWig hg19 archived control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample, missing derived_from ENCFF001VNL bed narrowPeak peaks ENCSR000EGL ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour IRF1-human ENCAB000AHX DNA see document see document False 2012-05-14 ENCODE 777725 Michael Snyder, Stanford c9ce493872b283bdc57102c6469aed39 https://www.encodeproject.org/files/ENCFF001VNL/@@download/ENCFF001VNL.bed.gz hg19 archived control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample, missing derived_from ENCFF002CWW bed narrowPeak optimal idr thresholded peaks ENCSR000EGL ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour IRF1-human ENCAB000AHX DNA see document see document False 2012-05-14 ENCODE 217639 ENCODE Consortium Analysis Working Group 7abe5f941557c480b288e4e5411459e0 https://www.encodeproject.org/files/ENCFF002CWW/@@download/ENCFF002CWW.bed.gz hg19 archived control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample, missing derived_from ENCFF938SGM bigBed narrowPeak optimal idr thresholded peaks ENCSR000EGL ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour IRF1-human ENCAB000AHX DNA see document see document False 2012-05-14 ENCODE ENCFF002CWW 561633 ENCODE Consortium 9dabd119807a7d89bfdf80d2e497775d https://www.encodeproject.org/files/ENCFF938SGM/@@download/ENCFF938SGM.bigBed hg19 archived control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample ENCFF780TME bam unfiltered alignments ENCSR000EGL ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour IRF1-human ENCAB000AHX DNA see document see document False 2012-05-14 ENCODE 2 27 ENCFF000YRJ, ENCFF807MUK 1146998500 ENCODE Processing Pipeline ffdbede8e9d9fb9b6bfffa770ef78e4f https://www.encodeproject.org/files/ENCFF780TME/@@download/ENCFF780TME.bam hg19 released control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample ENCFF519LOD bam unfiltered alignments ENCSR000EGL ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour IRF1-human ENCAB000AHX DNA see document see document False 2012-05-14 ENCODE 1 27 ENCFF000YRH, ENCFF807MUK 1141845244 ENCODE Processing Pipeline 7fb7e9eb2bdf1698c167edd04a19d866 https://www.encodeproject.org/files/ENCFF519LOD/@@download/ENCFF519LOD.bam hg19 released control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample ENCFF026NGK bam alignments ENCSR000EGL ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour IRF1-human ENCAB000AHX DNA see document see document False 2012-05-14 ENCODE 2 27 ENCFF000YRJ, ENCFF807MUK 721524934 ENCODE Processing Pipeline 78f47e66157e9f17034feadd6af501bc https://www.encodeproject.org/files/ENCFF026NGK/@@download/ENCFF026NGK.bam hg19 released control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample ENCFF792CXJ bam alignments ENCSR000EGL ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour IRF1-human ENCAB000AHX DNA see document see document False 2012-05-14 ENCODE 1 27 ENCFF000YRH, ENCFF807MUK 684188866 ENCODE Processing Pipeline 776acd1741dc050d7153457826999814 https://www.encodeproject.org/files/ENCFF792CXJ/@@download/ENCFF792CXJ.bam hg19 released control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample ENCFF802ILZ bigWig signal p-value ENCSR000EGL ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour IRF1-human ENCAB000AHX DNA see document see document False 2012-05-14 ENCODE 1 ENCFF792CXJ, ENCFF998GMZ 338930213 ENCODE Processing Pipeline 3cca1a09ec141a207e1be7cd119a7095 https://www.encodeproject.org/files/ENCFF802ILZ/@@download/ENCFF802ILZ.bigWig hg19 released control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample ENCFF123AXY bigWig signal p-value ENCSR000EGL ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour IRF1-human ENCAB000AHX DNA see document see document False 2012-05-14 ENCODE 2 ENCFF026NGK, ENCFF998GMZ 326661972 ENCODE Processing Pipeline 2fcfe5809572e25d882cb52f497da6ac https://www.encodeproject.org/files/ENCFF123AXY/@@download/ENCFF123AXY.bigWig hg19 released control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample ENCFF354OTY bigBed narrowPeak peaks ENCSR000EGL ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour IRF1-human ENCAB000AHX DNA see document see document False 2012-05-14 ENCODE 2 ENCFF517QNU 10407397 ENCODE Processing Pipeline 74f3424019d1e337d3966f088c909797 https://www.encodeproject.org/files/ENCFF354OTY/@@download/ENCFF354OTY.bigBed hg19 released control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample ENCFF402YFM bigBed narrowPeak peaks ENCSR000EGL ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour IRF1-human ENCAB000AHX DNA see document see document False 2012-05-14 ENCODE 1 ENCFF920BWA 10715550 ENCODE Processing Pipeline b4a8be7b3992cd97d6eeedfe2ef081cc https://www.encodeproject.org/files/ENCFF402YFM/@@download/ENCFF402YFM.bigBed hg19 released control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample ENCFF294MPW bigWig signal p-value ENCSR000EGL ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour IRF1-human ENCAB000AHX DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF026NGK, ENCFF792CXJ, ENCFF998GMZ 343051098 ENCODE Processing Pipeline 85f4901b4dab8814376696eec09fef54 https://www.encodeproject.org/files/ENCFF294MPW/@@download/ENCFF294MPW.bigWig hg19 released control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample ENCFF191ZPS bigWig fold change over control ENCSR000EGL ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour IRF1-human ENCAB000AHX DNA see document see document False 2012-05-14 ENCODE 1 ENCFF792CXJ, ENCFF998GMZ 351898243 ENCODE Processing Pipeline b5989dc75e909bd0645ebce55e9d057d https://www.encodeproject.org/files/ENCFF191ZPS/@@download/ENCFF191ZPS.bigWig hg19 released control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample ENCFF573UDQ bigWig fold change over control ENCSR000EGL ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour IRF1-human ENCAB000AHX DNA see document see document False 2012-05-14 ENCODE 2 ENCFF026NGK, ENCFF998GMZ 360074193 ENCODE Processing Pipeline c54b2cea4ccb26e84b49c1bfb2d84b8f https://www.encodeproject.org/files/ENCFF573UDQ/@@download/ENCFF573UDQ.bigWig hg19 released control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample ENCFF979SUZ bigWig fold change over control ENCSR000EGL ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour IRF1-human ENCAB000AHX DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF026NGK, ENCFF792CXJ, ENCFF998GMZ 607262116 ENCODE Processing Pipeline c98a17ce9b574093d2df34415816d3a5 https://www.encodeproject.org/files/ENCFF979SUZ/@@download/ENCFF979SUZ.bigWig hg19 released control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample ENCFF517QNU bed narrowPeak peaks ENCSR000EGL ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour IRF1-human ENCAB000AHX DNA see document see document False 2012-05-14 ENCODE 2 ENCFF026NGK, ENCFF998GMZ 4438555 ENCODE Processing Pipeline 3214b84988940e0c8d9440e92627a546 https://www.encodeproject.org/files/ENCFF517QNU/@@download/ENCFF517QNU.bed.gz hg19 released control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample ENCFF602EGF bigBed narrowPeak peaks ENCSR000EGL ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour IRF1-human ENCAB000AHX DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF025ZWJ 11018195 ENCODE Processing Pipeline 34b2ded5614eefcf1a19b5344cf380ae https://www.encodeproject.org/files/ENCFF602EGF/@@download/ENCFF602EGF.bigBed hg19 released control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample ENCFF546ZGF bed narrowPeak conservative idr thresholded peaks ENCSR000EGL ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour IRF1-human ENCAB000AHX DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF001TDO, ENCFF025ZWJ, ENCFF517QNU, ENCFF920BWA 192279 ENCODE Processing Pipeline f63ed3aa130f8f9f7736195158053c26 https://www.encodeproject.org/files/ENCFF546ZGF/@@download/ENCFF546ZGF.bed.gz hg19 released control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample ENCFF543CGB bigBed narrowPeak conservative idr thresholded peaks ENCSR000EGL ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour IRF1-human ENCAB000AHX DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF546ZGF 396255 ENCODE Processing Pipeline f0b3b557ee1b45f552a751e7504d50e6 https://www.encodeproject.org/files/ENCFF543CGB/@@download/ENCFF543CGB.bigBed hg19 released control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample ENCFF909LKK bed narrowPeak optimal idr thresholded peaks ENCSR000EGL ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour IRF1-human ENCAB000AHX DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF001TDO, ENCFF025ZWJ, ENCFF517QNU, ENCFF920BWA 231075 ENCODE Processing Pipeline c977d55edfbe570ff2123255d9b82488 https://www.encodeproject.org/files/ENCFF909LKK/@@download/ENCFF909LKK.bed.gz hg19 released control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample ENCFF663HVJ bigBed narrowPeak optimal idr thresholded peaks ENCSR000EGL ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour IRF1-human ENCAB000AHX DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF909LKK 450904 ENCODE Processing Pipeline df6e175146f9fc19ad354d1295cd6d34 https://www.encodeproject.org/files/ENCFF663HVJ/@@download/ENCFF663HVJ.bigBed hg19 released control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample ENCFF259RRK bam alignments ENCSR000EGL ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour IRF1-human ENCAB000AHX DNA see document see document False 2012-05-14 ENCODE 1 27 ENCFF000YRH, ENCFF643CGH 683456399 ENCODE Processing Pipeline 6c352c50bc6fb0f963db23ec7085620c https://www.encodeproject.org/files/ENCFF259RRK/@@download/ENCFF259RRK.bam GRCh38 released control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample ENCFF929ENI bam unfiltered alignments ENCSR000EGL ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour IRF1-human ENCAB000AHX DNA see document see document False 2012-05-14 ENCODE 1 27 ENCFF000YRH, ENCFF643CGH 1145604718 ENCODE Processing Pipeline 0b33a75fc90ef5f084a3b9f710e3593c https://www.encodeproject.org/files/ENCFF929ENI/@@download/ENCFF929ENI.bam GRCh38 released control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample ENCFF509OLO bam unfiltered alignments ENCSR000EGL ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour IRF1-human ENCAB000AHX DNA see document see document False 2012-05-14 ENCODE 2 27 ENCFF000YRJ, ENCFF643CGH 1151001301 ENCODE Processing Pipeline 1c7e169cec083e32137c30bedd6259de https://www.encodeproject.org/files/ENCFF509OLO/@@download/ENCFF509OLO.bam GRCh38 released control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample ENCFF244IJF bam alignments ENCSR000EGL ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour IRF1-human ENCAB000AHX DNA see document see document False 2012-05-14 ENCODE 2 27 ENCFF000YRJ, ENCFF643CGH 720722815 ENCODE Processing Pipeline 42886c9aa6d7a45ab34ae6ad18765033 https://www.encodeproject.org/files/ENCFF244IJF/@@download/ENCFF244IJF.bam GRCh38 released control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample ENCFF134FOD bigWig signal p-value ENCSR000EGL ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour IRF1-human ENCAB000AHX DNA see document see document False 2012-05-14 ENCODE 1 ENCFF259RRK, ENCFF332CUX 342642930 ENCODE Processing Pipeline cb41f7075ba966d6d390195f3950d3a3 https://www.encodeproject.org/files/ENCFF134FOD/@@download/ENCFF134FOD.bigWig GRCh38 released control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample ENCFF454FUO bigWig signal p-value ENCSR000EGL ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour IRF1-human ENCAB000AHX DNA see document see document False 2012-05-14 ENCODE 2 ENCFF244IJF, ENCFF332CUX 326216358 ENCODE Processing Pipeline ca388819010680037863cba4705aa100 https://www.encodeproject.org/files/ENCFF454FUO/@@download/ENCFF454FUO.bigWig GRCh38 released control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample ENCFF920BWA bed narrowPeak peaks ENCSR000EGL ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour IRF1-human ENCAB000AHX DNA see document see document False 2012-05-14 ENCODE 1 ENCFF792CXJ, ENCFF998GMZ 4768546 ENCODE Processing Pipeline d2ae07c82add76b2ff8ffbc3942cd603 https://www.encodeproject.org/files/ENCFF920BWA/@@download/ENCFF920BWA.bed.gz hg19 released control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample ENCFF025ZWJ bed narrowPeak peaks ENCSR000EGL ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour IRF1-human ENCAB000AHX DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF026NGK, ENCFF792CXJ, ENCFF998GMZ 5406424 ENCODE Processing Pipeline 107166fd128de35831d2948c2c5da9d5 https://www.encodeproject.org/files/ENCFF025ZWJ/@@download/ENCFF025ZWJ.bed.gz hg19 released control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample ENCFF502AUX bigWig signal p-value ENCSR000EGL ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour IRF1-human ENCAB000AHX DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF244IJF, ENCFF259RRK, ENCFF332CUX 342719904 ENCODE Processing Pipeline f2defd0cbb4e1a971c25a9d76e030428 https://www.encodeproject.org/files/ENCFF502AUX/@@download/ENCFF502AUX.bigWig GRCh38 released control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample ENCFF410QCA bigWig fold change over control ENCSR000EGL ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour IRF1-human ENCAB000AHX DNA see document see document False 2012-05-14 ENCODE 1 ENCFF259RRK, ENCFF332CUX 352175746 ENCODE Processing Pipeline 689aa86fa498f3c2f3f5fc1eccbc3ca2 https://www.encodeproject.org/files/ENCFF410QCA/@@download/ENCFF410QCA.bigWig GRCh38 released control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample ENCFF152BMD bigWig fold change over control ENCSR000EGL ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour IRF1-human ENCAB000AHX DNA see document see document False 2012-05-14 ENCODE 2 ENCFF244IJF, ENCFF332CUX 359374313 ENCODE Processing Pipeline 3064b230d26dfecaeece082777fec319 https://www.encodeproject.org/files/ENCFF152BMD/@@download/ENCFF152BMD.bigWig GRCh38 released control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample ENCFF172XHL bed narrowPeak peaks ENCSR000EGL ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour IRF1-human ENCAB000AHX DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF244IJF, ENCFF259RRK, ENCFF332CUX 5357987 ENCODE Processing Pipeline 460d44c7bdba7887a4c5b3ad35750b0f https://www.encodeproject.org/files/ENCFF172XHL/@@download/ENCFF172XHL.bed.gz GRCh38 released control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample ENCFF452YAU bigWig fold change over control ENCSR000EGL ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour IRF1-human ENCAB000AHX DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF244IJF, ENCFF259RRK, ENCFF332CUX 611965393 ENCODE Processing Pipeline f1f28453df76593e8a14c127d304c136 https://www.encodeproject.org/files/ENCFF452YAU/@@download/ENCFF452YAU.bigWig GRCh38 released control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample ENCFF816CMK bed narrowPeak peaks ENCSR000EGL ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour IRF1-human ENCAB000AHX DNA see document see document False 2012-05-14 ENCODE 1 ENCFF259RRK, ENCFF332CUX 4742350 ENCODE Processing Pipeline 641168b46cbb841aa69ad60152907f10 https://www.encodeproject.org/files/ENCFF816CMK/@@download/ENCFF816CMK.bed.gz GRCh38 released control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample ENCFF928TBI bed narrowPeak peaks ENCSR000EGL ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour IRF1-human ENCAB000AHX DNA see document see document False 2012-05-14 ENCODE 2 ENCFF244IJF, ENCFF332CUX 4429693 ENCODE Processing Pipeline 5f66e8cf8fb59691a3d991b9e9dcc587 https://www.encodeproject.org/files/ENCFF928TBI/@@download/ENCFF928TBI.bed.gz GRCh38 released control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample ENCFF429YXU bigBed narrowPeak peaks ENCSR000EGL ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour IRF1-human ENCAB000AHX DNA see document see document False 2012-05-14 ENCODE 2 ENCFF928TBI 10400360 ENCODE Processing Pipeline c6ac03f3ad44235466d98587b96b9eca https://www.encodeproject.org/files/ENCFF429YXU/@@download/ENCFF429YXU.bigBed GRCh38 released control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample ENCFF008FES bigBed narrowPeak peaks ENCSR000EGL ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour IRF1-human ENCAB000AHX DNA see document see document False 2012-05-14 ENCODE 1 ENCFF816CMK 10689894 ENCODE Processing Pipeline 91c40094dc23bc71bc05ff7668b6c59a https://www.encodeproject.org/files/ENCFF008FES/@@download/ENCFF008FES.bigBed GRCh38 released control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample ENCFF560OKM bigBed narrowPeak peaks ENCSR000EGL ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour IRF1-human ENCAB000AHX DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF172XHL 11003039 ENCODE Processing Pipeline f47375d1fe7d05992c07b21d10fcb1b7 https://www.encodeproject.org/files/ENCFF560OKM/@@download/ENCFF560OKM.bigBed GRCh38 released control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample ENCFF736MBF bed narrowPeak conservative idr thresholded peaks ENCSR000EGL ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour IRF1-human ENCAB000AHX DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF172XHL, ENCFF419RSJ, ENCFF816CMK, ENCFF928TBI 187311 ENCODE Processing Pipeline 721befe204f5cd95a7645193dc86ebf1 https://www.encodeproject.org/files/ENCFF736MBF/@@download/ENCFF736MBF.bed.gz GRCh38 released control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample ENCFF438KDS bigBed narrowPeak conservative idr thresholded peaks ENCSR000EGL ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour IRF1-human ENCAB000AHX DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF736MBF 391071 ENCODE Processing Pipeline 8386224f161b93f9804dd7edbb743598 https://www.encodeproject.org/files/ENCFF438KDS/@@download/ENCFF438KDS.bigBed GRCh38 released control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample ENCFF978BBL bed narrowPeak optimal idr thresholded peaks ENCSR000EGL ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour IRF1-human ENCAB000AHX DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF172XHL, ENCFF419RSJ, ENCFF816CMK, ENCFF928TBI 222922 ENCODE Processing Pipeline 3cf058dd9ea7d55c1849293e4292fee6 https://www.encodeproject.org/files/ENCFF978BBL/@@download/ENCFF978BBL.bed.gz GRCh38 released control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample ENCFF319KTK bigBed narrowPeak optimal idr thresholded peaks ENCSR000EGL ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour IRF1-human ENCAB000AHX DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF978BBL 442067 ENCODE Processing Pipeline 55c8fbf16116a9399e7737b45f0f74f8 https://www.encodeproject.org/files/ENCFF319KTK/@@download/ENCFF319KTK.bigBed GRCh38 released control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample ENCFF020ZFY bam unfiltered alignments ENCSR497VFH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF639-human ENCAB707RWG DNA False 2018-01-26 ENCODE 1 100 ENCFF187CTD, ENCFF300NMV, ENCFF807MUK 4227744608 ENCODE Processing Pipeline 1b6d20d2c7b71b38b0719fb2f7766b02 https://www.encodeproject.org/files/ENCFF020ZFY/@@download/ENCFF020ZFY.bam hg19 released borderline replicate concordance, low read depth experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF901FMU bam unfiltered alignments ENCSR497VFH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF639-human ENCAB707RWG DNA False 2018-01-26 ENCODE 2 100 ENCFF124FJO, ENCFF497YJP, ENCFF807MUK 4895195112 ENCODE Processing Pipeline 9c3fcb89095a6b1d8ac272822a9f203c https://www.encodeproject.org/files/ENCFF901FMU/@@download/ENCFF901FMU.bam hg19 released borderline replicate concordance, low read depth experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF124FJO fastq reads ENCSR497VFH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF639-human ENCAB707RWG DNA False 2018-01-26 ENCODE 2 1 100 paired-ended 1 ENCFF497YJP 2175139550 Michael Snyder, Stanford 2de266a5d5426e727b1b73f609ec3e88 https://www.encodeproject.org/files/ENCFF124FJO/@@download/ENCFF124FJO.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFD/ released borderline replicate concordance, low read depth experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF497YJP fastq reads ENCSR497VFH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF639-human ENCAB707RWG DNA False 2018-01-26 ENCODE 2 1 100 paired-ended 2 ENCFF124FJO 2275160922 Michael Snyder, Stanford ca968b5a7d63eae45c3e7dc80e7bcdd0 https://www.encodeproject.org/files/ENCFF497YJP/@@download/ENCFF497YJP.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFA/ released borderline replicate concordance, low read depth experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF300NMV fastq reads ENCSR497VFH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF639-human ENCAB707RWG DNA False 2018-01-26 ENCODE 1 1 100 paired-ended 1 ENCFF187CTD 1886759666 Michael Snyder, Stanford 5efcfa51a7d31804957ac0f4bd452f85 https://www.encodeproject.org/files/ENCFF300NMV/@@download/ENCFF300NMV.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFF/ released borderline replicate concordance, low read depth experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF187CTD fastq reads ENCSR497VFH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF639-human ENCAB707RWG DNA False 2018-01-26 ENCODE 1 1 100 paired-ended 2 ENCFF300NMV 1954169045 Michael Snyder, Stanford 4bf0d45236bdf88de4fe65a12ec53ac8 https://www.encodeproject.org/files/ENCFF187CTD/@@download/ENCFF187CTD.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFH/ released borderline replicate concordance, low read depth experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF856OQX bam alignments ENCSR497VFH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF639-human ENCAB707RWG DNA False 2018-01-26 ENCODE 2 100 ENCFF124FJO, ENCFF497YJP, ENCFF807MUK 3897433966 ENCODE Processing Pipeline 1a0989f35386737443f0145873e0674a https://www.encodeproject.org/files/ENCFF856OQX/@@download/ENCFF856OQX.bam hg19 released borderline replicate concordance, low read depth experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF930YAS bam alignments ENCSR497VFH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF639-human ENCAB707RWG DNA False 2018-01-26 ENCODE 1 100 ENCFF187CTD, ENCFF300NMV, ENCFF807MUK 3371473135 ENCODE Processing Pipeline af563575e9e0191e2a46c6a225013d18 https://www.encodeproject.org/files/ENCFF930YAS/@@download/ENCFF930YAS.bam hg19 released borderline replicate concordance, low read depth experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF371BSX bigWig signal p-value ENCSR497VFH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF639-human ENCAB707RWG DNA False 2018-01-26 ENCODE 1 ENCFF581ZJL, ENCFF930YAS 941302593 ENCODE Processing Pipeline 68c9296d1ef3df79610a2c5cffde1943 https://www.encodeproject.org/files/ENCFF371BSX/@@download/ENCFF371BSX.bigWig hg19 released borderline replicate concordance, low read depth experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF212SJK bigWig signal p-value ENCSR497VFH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF639-human ENCAB707RWG DNA False 2018-01-26 ENCODE 2 ENCFF051LWI, ENCFF856OQX 1145744188 ENCODE Processing Pipeline 7a76005abb0c62d81f69d2f6e98cabea https://www.encodeproject.org/files/ENCFF212SJK/@@download/ENCFF212SJK.bigWig hg19 released borderline replicate concordance, low read depth experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF926CYS bigWig signal p-value ENCSR497VFH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF639-human ENCAB707RWG DNA False 2018-01-26 ENCODE 1, 2 ENCFF051LWI, ENCFF581ZJL, ENCFF856OQX, ENCFF930YAS 1821323853 ENCODE Processing Pipeline 934741981de875572fc7662d7bf4d192 https://www.encodeproject.org/files/ENCFF926CYS/@@download/ENCFF926CYS.bigWig hg19 released borderline replicate concordance, low read depth experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF327UGX bigWig fold change over control ENCSR497VFH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF639-human ENCAB707RWG DNA False 2018-01-26 ENCODE 1 ENCFF581ZJL, ENCFF930YAS 1085051776 ENCODE Processing Pipeline acb470ca2f83dc9a881a7a455e3ad442 https://www.encodeproject.org/files/ENCFF327UGX/@@download/ENCFF327UGX.bigWig hg19 released borderline replicate concordance, low read depth experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF394RZH bigWig fold change over control ENCSR497VFH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF639-human ENCAB707RWG DNA False 2018-01-26 ENCODE 2 ENCFF051LWI, ENCFF856OQX 1126078573 ENCODE Processing Pipeline 4edbe83e4d8cc6b6f2992ba13d59a078 https://www.encodeproject.org/files/ENCFF394RZH/@@download/ENCFF394RZH.bigWig hg19 released borderline replicate concordance, low read depth experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF365YDY bigWig fold change over control ENCSR497VFH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF639-human ENCAB707RWG DNA False 2018-01-26 ENCODE 1, 2 ENCFF051LWI, ENCFF581ZJL, ENCFF856OQX, ENCFF930YAS 2038759947 ENCODE Processing Pipeline 11c2ec51d4dda565f64c934f57d2a4bc https://www.encodeproject.org/files/ENCFF365YDY/@@download/ENCFF365YDY.bigWig hg19 released borderline replicate concordance, low read depth experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF225XFM bed narrowPeak peaks ENCSR497VFH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF639-human ENCAB707RWG DNA False 2018-01-26 ENCODE 2 ENCFF051LWI, ENCFF856OQX 6626416 ENCODE Processing Pipeline c669b72e356bca13d4f5c5effb5be7e1 https://www.encodeproject.org/files/ENCFF225XFM/@@download/ENCFF225XFM.bed.gz hg19 released borderline replicate concordance, low read depth experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF207WQF bed narrowPeak peaks ENCSR497VFH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF639-human ENCAB707RWG DNA False 2018-01-26 ENCODE 1, 2 ENCFF051LWI, ENCFF581ZJL, ENCFF856OQX, ENCFF930YAS 7200356 ENCODE Processing Pipeline 4db7e68cb8bfb15ee5660bf09956c8b5 https://www.encodeproject.org/files/ENCFF207WQF/@@download/ENCFF207WQF.bed.gz hg19 released borderline replicate concordance, low read depth experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF204SBR bed narrowPeak peaks ENCSR497VFH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF639-human ENCAB707RWG DNA False 2018-01-26 ENCODE 1 ENCFF581ZJL, ENCFF930YAS 6487472 ENCODE Processing Pipeline 1f5cc501e5ab23f31a2431cf6090cec3 https://www.encodeproject.org/files/ENCFF204SBR/@@download/ENCFF204SBR.bed.gz hg19 released borderline replicate concordance, low read depth experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF716OSY bigBed narrowPeak peaks ENCSR497VFH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF639-human ENCAB707RWG DNA False 2018-01-26 ENCODE 1 ENCFF204SBR 13331233 ENCODE Processing Pipeline a52aefdbfb99cd4a70fa180a89ec655f https://www.encodeproject.org/files/ENCFF716OSY/@@download/ENCFF716OSY.bigBed hg19 released borderline replicate concordance, low read depth experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF456PTX bigBed narrowPeak peaks ENCSR497VFH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF639-human ENCAB707RWG DNA False 2018-01-26 ENCODE 1, 2 ENCFF207WQF 13210540 ENCODE Processing Pipeline f5b608b00bfc340fce44d08d98b09a0a https://www.encodeproject.org/files/ENCFF456PTX/@@download/ENCFF456PTX.bigBed hg19 released borderline replicate concordance, low read depth experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF936KBX bigBed narrowPeak peaks ENCSR497VFH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF639-human ENCAB707RWG DNA False 2018-01-26 ENCODE 2 ENCFF225XFM 13344493 ENCODE Processing Pipeline 5df4749a7b333e3e7d82cc1b57e3b694 https://www.encodeproject.org/files/ENCFF936KBX/@@download/ENCFF936KBX.bigBed hg19 released borderline replicate concordance, low read depth experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF944TSJ bigBed narrowPeak conservative idr thresholded peaks ENCSR497VFH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF639-human ENCAB707RWG DNA False 2018-01-26 ENCODE 1, 2 ENCFF774SSI 215927 ENCODE Processing Pipeline 8bfc4eb49c83f34c842260ec05e8a863 https://www.encodeproject.org/files/ENCFF944TSJ/@@download/ENCFF944TSJ.bigBed hg19 released borderline replicate concordance, low read depth experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF774SSI bed narrowPeak conservative idr thresholded peaks ENCSR497VFH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF639-human ENCAB707RWG DNA False 2018-01-26 ENCODE 1, 2 ENCFF001TDO, ENCFF204SBR, ENCFF207WQF, ENCFF225XFM 86144 ENCODE Processing Pipeline b525e386805672efa4b189c89ad332b8 https://www.encodeproject.org/files/ENCFF774SSI/@@download/ENCFF774SSI.bed.gz hg19 released borderline replicate concordance, low read depth experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF284PKK bed narrowPeak optimal idr thresholded peaks ENCSR497VFH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF639-human ENCAB707RWG DNA False 2018-01-26 ENCODE 1, 2 ENCFF001TDO, ENCFF204SBR, ENCFF207WQF, ENCFF225XFM 164358 ENCODE Processing Pipeline b9c899f383de2ba7d6944157dbe28386 https://www.encodeproject.org/files/ENCFF284PKK/@@download/ENCFF284PKK.bed.gz hg19 released borderline replicate concordance, low read depth experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF301XZE bigBed narrowPeak optimal idr thresholded peaks ENCSR497VFH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF639-human ENCAB707RWG DNA False 2018-01-26 ENCODE 1, 2 ENCFF284PKK 395373 ENCODE Processing Pipeline 4515df64147a9e5be11003a0c40391aa https://www.encodeproject.org/files/ENCFF301XZE/@@download/ENCFF301XZE.bigBed hg19 released borderline replicate concordance, low read depth experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF830YWS bam unfiltered alignments ENCSR497VFH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF639-human ENCAB707RWG DNA False 2018-01-26 ENCODE 2 100 ENCFF124FJO, ENCFF497YJP, ENCFF643CGH 4897768922 ENCODE Processing Pipeline 4b929920d581be44c7beb09103f35cf0 https://www.encodeproject.org/files/ENCFF830YWS/@@download/ENCFF830YWS.bam GRCh38 released borderline replicate concordance, low read depth experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF682PQT bam unfiltered alignments ENCSR497VFH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF639-human ENCAB707RWG DNA False 2018-01-26 ENCODE 1 100 ENCFF187CTD, ENCFF300NMV, ENCFF643CGH 4230280929 ENCODE Processing Pipeline c773dcd80c2194c537d163ff9fdb047e https://www.encodeproject.org/files/ENCFF682PQT/@@download/ENCFF682PQT.bam GRCh38 released borderline replicate concordance, low read depth experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF240BDN bam alignments ENCSR497VFH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF639-human ENCAB707RWG DNA False 2018-01-26 ENCODE 2 100 ENCFF124FJO, ENCFF497YJP, ENCFF643CGH 3902913952 ENCODE Processing Pipeline 2fb09952da22fa6989dd2d0a86164432 https://www.encodeproject.org/files/ENCFF240BDN/@@download/ENCFF240BDN.bam GRCh38 released borderline replicate concordance, low read depth experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF411KAB bam alignments ENCSR497VFH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF639-human ENCAB707RWG DNA False 2018-01-26 ENCODE 1 100 ENCFF187CTD, ENCFF300NMV, ENCFF643CGH 3374550814 ENCODE Processing Pipeline 4c8d2fe47c8a755735584d1efb389284 https://www.encodeproject.org/files/ENCFF411KAB/@@download/ENCFF411KAB.bam GRCh38 released borderline replicate concordance, low read depth experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF419CEW bigWig signal p-value ENCSR497VFH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF639-human ENCAB707RWG DNA False 2018-01-26 ENCODE 1 ENCFF411KAB 1059178578 ENCODE Processing Pipeline dbf8dd756831e50535aba1762e16f6a2 https://www.encodeproject.org/files/ENCFF419CEW/@@download/ENCFF419CEW.bigWig GRCh38 released borderline replicate concordance, low read depth experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF215HJT bigWig signal p-value ENCSR497VFH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF639-human ENCAB707RWG DNA False 2018-01-26 ENCODE 2 ENCFF240BDN 945147697 ENCODE Processing Pipeline 79c34009f7b07e29e6f193d11b69ea56 https://www.encodeproject.org/files/ENCFF215HJT/@@download/ENCFF215HJT.bigWig GRCh38 released borderline replicate concordance, low read depth experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF132DMT bigWig signal p-value ENCSR497VFH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF639-human ENCAB707RWG DNA False 2018-01-26 ENCODE 1, 2 ENCFF240BDN, ENCFF411KAB 1809277192 ENCODE Processing Pipeline dff428cc58d10adb23722d5cb9f3175a https://www.encodeproject.org/files/ENCFF132DMT/@@download/ENCFF132DMT.bigWig GRCh38 released borderline replicate concordance, low read depth experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF515ELK bigWig fold change over control ENCSR497VFH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF639-human ENCAB707RWG DNA False 2018-01-26 ENCODE 1 ENCFF411KAB 1087269730 ENCODE Processing Pipeline e3ee313b080e8e13a8955be1bdc7a52c https://www.encodeproject.org/files/ENCFF515ELK/@@download/ENCFF515ELK.bigWig GRCh38 released borderline replicate concordance, low read depth experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF326RNB bigWig fold change over control ENCSR497VFH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF639-human ENCAB707RWG DNA False 2018-01-26 ENCODE 2 ENCFF240BDN 1127962807 ENCODE Processing Pipeline 050bd3039f095bb57d97ed1afb002e63 https://www.encodeproject.org/files/ENCFF326RNB/@@download/ENCFF326RNB.bigWig GRCh38 released borderline replicate concordance, low read depth experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF027NWG bigWig fold change over control ENCSR497VFH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF639-human ENCAB707RWG DNA False 2018-01-26 ENCODE 1, 2 ENCFF240BDN, ENCFF411KAB 2054337101 ENCODE Processing Pipeline 8bdbadf0823bd9f97452fbb4cf28bcd3 https://www.encodeproject.org/files/ENCFF027NWG/@@download/ENCFF027NWG.bigWig GRCh38 released borderline replicate concordance, low read depth experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF013CGE bed narrowPeak peaks ENCSR497VFH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF639-human ENCAB707RWG DNA False 2018-01-26 ENCODE 1 ENCFF411KAB 6374437 ENCODE Processing Pipeline 5691ae77e2aaa763acbe0d3299b5f78e https://www.encodeproject.org/files/ENCFF013CGE/@@download/ENCFF013CGE.bed.gz GRCh38 released borderline replicate concordance, low read depth experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF485ATS bed narrowPeak peaks ENCSR497VFH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF639-human ENCAB707RWG DNA False 2018-01-26 ENCODE 2 ENCFF240BDN 6527136 ENCODE Processing Pipeline e16d223c52ff41cbf64fccd7f20973bb https://www.encodeproject.org/files/ENCFF485ATS/@@download/ENCFF485ATS.bed.gz GRCh38 released borderline replicate concordance, low read depth experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF150CHR bed narrowPeak peaks ENCSR497VFH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF639-human ENCAB707RWG DNA False 2018-01-26 ENCODE 1, 2 ENCFF240BDN, ENCFF411KAB 7165190 ENCODE Processing Pipeline 2f9d3c68d513f2dfb2860e3a75c9bba4 https://www.encodeproject.org/files/ENCFF150CHR/@@download/ENCFF150CHR.bed.gz GRCh38 released borderline replicate concordance, low read depth experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF981AAH bigBed narrowPeak peaks ENCSR497VFH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF639-human ENCAB707RWG DNA False 2018-01-26 ENCODE 1 ENCFF013CGE 13341731 ENCODE Processing Pipeline c7ccb3b2c4ebaa78de0fd0054bbd87b3 https://www.encodeproject.org/files/ENCFF981AAH/@@download/ENCFF981AAH.bigBed GRCh38 released borderline replicate concordance, low read depth experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF054QTT bigBed narrowPeak peaks ENCSR497VFH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF639-human ENCAB707RWG DNA False 2018-01-26 ENCODE 2 ENCFF485ATS 13354568 ENCODE Processing Pipeline 9b3b58fc9b6a305d35a42d4a96bed7b5 https://www.encodeproject.org/files/ENCFF054QTT/@@download/ENCFF054QTT.bigBed GRCh38 released borderline replicate concordance, low read depth experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF020WGR bigBed narrowPeak peaks ENCSR497VFH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF639-human ENCAB707RWG DNA False 2018-01-26 ENCODE 1, 2 ENCFF150CHR 13222546 ENCODE Processing Pipeline e27cd3023565a902a721cf6c6cd64aab https://www.encodeproject.org/files/ENCFF020WGR/@@download/ENCFF020WGR.bigBed GRCh38 released borderline replicate concordance, low read depth experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF947YGS bed narrowPeak conservative idr thresholded peaks ENCSR497VFH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF639-human ENCAB707RWG DNA False 2018-01-26 ENCODE 1, 2 ENCFF013CGE, ENCFF150CHR, ENCFF419RSJ, ENCFF485ATS 85741 ENCODE Processing Pipeline a9091f6edaaa8ba4579bac3a02e4a16e https://www.encodeproject.org/files/ENCFF947YGS/@@download/ENCFF947YGS.bed.gz GRCh38 released borderline replicate concordance, low read depth experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF224KBA bigBed narrowPeak conservative idr thresholded peaks ENCSR497VFH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF639-human ENCAB707RWG DNA False 2018-01-26 ENCODE 1, 2 ENCFF947YGS 217555 ENCODE Processing Pipeline bd776e8679c10321b9dc26d75d8cb73b https://www.encodeproject.org/files/ENCFF224KBA/@@download/ENCFF224KBA.bigBed GRCh38 released borderline replicate concordance, low read depth experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF404EVY bed narrowPeak optimal idr thresholded peaks ENCSR497VFH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF639-human ENCAB707RWG DNA False 2018-01-26 ENCODE 1, 2 ENCFF013CGE, ENCFF150CHR, ENCFF419RSJ, ENCFF485ATS 159125 ENCODE Processing Pipeline dd691acc7afd56a46916b5f1200a7c08 https://www.encodeproject.org/files/ENCFF404EVY/@@download/ENCFF404EVY.bed.gz GRCh38 released borderline replicate concordance, low read depth experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF732BRI bigBed narrowPeak optimal idr thresholded peaks ENCSR497VFH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF639-human ENCAB707RWG DNA False 2018-01-26 ENCODE 1, 2 ENCFF404EVY 327044 ENCODE Processing Pipeline b8a5d6225982eb3b2ad41a5e7cfd9a8e https://www.encodeproject.org/files/ENCFF732BRI/@@download/ENCFF732BRI.bigBed GRCh38 released borderline replicate concordance, low read depth experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF000QGR bam alignments ENCSR000BNL ChIP-seq EFO:0002067 K562 cell line Homo sapiens SP2-human ENCAB000AKZ DNA see document see document False 2011-07-18 ENCODE 1 ENCFF000QGZ 337689407 Richard Myers, HAIB fd8af4fa9b0309a09a389e22a0a4f428 https://www.encodeproject.org/files/ENCFF000QGR/@@download/ENCFF000QGR.bam hg19 archived low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample poor library complexity, severe bottlenecking extremely low read depth ENCFF000QGS bigBed broadPeak peaks ENCSR000BNL ChIP-seq EFO:0002067 K562 cell line Homo sapiens SP2-human ENCAB000AKZ DNA see document see document False 2011-07-18 ENCODE 1 1 ENCFF001ULH 162588 Richard Myers, HAIB 98083d5cf9d108b13af19d3349819bec https://www.encodeproject.org/files/ENCFF000QGS/@@download/ENCFF000QGS.bigBed hg19 archived low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample poor library complexity, severe bottlenecking extremely low read depth ENCFF000QGT bigBed broadPeak peaks ENCSR000BNL ChIP-seq EFO:0002067 K562 cell line Homo sapiens SP2-human ENCAB000AKZ DNA see document see document False 2011-07-18 ENCODE 2 1 ENCFF001ULI 143356 Richard Myers, HAIB c4131d26a21ed76b779274b9a356d9ad https://www.encodeproject.org/files/ENCFF000QGT/@@download/ENCFF000QGT.bigBed hg19 archived low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample poor library complexity, severe bottlenecking extremely low read depth ENCFF000QGU bam alignments ENCSR000BNL ChIP-seq EFO:0002067 K562 cell line Homo sapiens SP2-human ENCAB000AKZ DNA see document see document False 2011-07-18 ENCODE 2 ENCFF000QHG 1054528961 Richard Myers, HAIB c4140a0eb030294c84b766375d02d555 https://www.encodeproject.org/files/ENCFF000QGU/@@download/ENCFF000QGU.bam hg19 archived low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample poor library complexity, severe bottlenecking extremely low read depth ENCFF000QGX bigWig raw signal ENCSR000BNL ChIP-seq EFO:0002067 K562 cell line Homo sapiens SP2-human ENCAB000AKZ DNA see document see document False 2011-07-18 ENCODE 1 1 8006516 Richard Myers, HAIB 82b8e8baa9acb5919804c22c19a81fca https://www.encodeproject.org/files/ENCFF000QGX/@@download/ENCFF000QGX.bigWig hg19 archived low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample, missing derived_from poor library complexity, severe bottlenecking extremely low read depth ENCFF000QGY bigWig raw signal ENCSR000BNL ChIP-seq EFO:0002067 K562 cell line Homo sapiens SP2-human ENCAB000AKZ DNA see document see document False 2011-07-18 ENCODE 2 1 13823053 Richard Myers, HAIB 6956882c4e7cf04ce95980fd30ff7db3 https://www.encodeproject.org/files/ENCFF000QGY/@@download/ENCFF000QGY.bigWig hg19 archived low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample, missing derived_from poor library complexity, severe bottlenecking extremely low read depth ENCFF000QGZ fastq reads ENCSR000BNL ChIP-seq EFO:0002067 K562 cell line Homo sapiens SP2-human ENCAB000AKZ DNA see document see document False 2011-07-18 ENCODE 1 1 36 single-ended 348204029 Richard Myers, HAIB bb9fa7bda467742279e143a714d96e2f https://www.encodeproject.org/files/ENCFF000QGZ/@@download/ENCFF000QGZ.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000QET/ released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample poor library complexity, severe bottlenecking extremely low read depth ENCFF000QHG fastq reads ENCSR000BNL ChIP-seq EFO:0002067 K562 cell line Homo sapiens SP2-human ENCAB000AKZ DNA see document see document False 2011-07-18 ENCODE 2 1 36 single-ended 1031879296 Richard Myers, HAIB cd8a7e2a684d5f4faa12b1f059dddfb5 https://www.encodeproject.org/files/ENCFF000QHG/@@download/ENCFF000QHG.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000QET/ released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample poor library complexity, severe bottlenecking extremely low read depth ENCFF001ULH bed broadPeak peaks ENCSR000BNL ChIP-seq EFO:0002067 K562 cell line Homo sapiens SP2-human ENCAB000AKZ DNA see document see document False 2011-07-18 ENCODE 1 1 62058 Richard Myers, HAIB bd3b339971e77cf8b65a5fe35acb7f97 https://www.encodeproject.org/files/ENCFF001ULH/@@download/ENCFF001ULH.bed.gz hg19 archived low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample, missing derived_from poor library complexity, severe bottlenecking extremely low read depth ENCFF001ULI bed broadPeak peaks ENCSR000BNL ChIP-seq EFO:0002067 K562 cell line Homo sapiens SP2-human ENCAB000AKZ DNA see document see document False 2011-07-18 ENCODE 2 1 55191 Richard Myers, HAIB 3a81d510fe3ab04ec3eccb9c89c88207 https://www.encodeproject.org/files/ENCFF001ULI/@@download/ENCFF001ULI.bed.gz hg19 archived low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample, missing derived_from poor library complexity, severe bottlenecking extremely low read depth ENCFF002CMO bed narrowPeak optimal idr thresholded peaks ENCSR000BNL ChIP-seq EFO:0002067 K562 cell line Homo sapiens SP2-human ENCAB000AKZ DNA see document see document False 2011-07-18 ENCODE 78442 ENCODE Consortium Analysis Working Group 2828cc5054bd1a82a2799daebfd143a3 https://www.encodeproject.org/files/ENCFF002CMO/@@download/ENCFF002CMO.bed.gz hg19 archived low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample, missing derived_from poor library complexity, severe bottlenecking extremely low read depth ENCFF098NMC bigBed narrowPeak optimal idr thresholded peaks ENCSR000BNL ChIP-seq EFO:0002067 K562 cell line Homo sapiens SP2-human ENCAB000AKZ DNA see document see document False 2011-07-18 ENCODE ENCFF002CMO 265587 ENCODE Consortium 852341f7a20effa35b197f0dc1d22965 https://www.encodeproject.org/files/ENCFF098NMC/@@download/ENCFF098NMC.bigBed hg19 archived low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample poor library complexity, severe bottlenecking extremely low read depth ENCFF553GDL bam alignments ENCSR000BNL ChIP-seq EFO:0002067 K562 cell line Homo sapiens SP2-human ENCAB000AKZ DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000QGZ, ENCFF643CGH 108646163 ENCODE Processing Pipeline 865ca36bb465b0f67f530f17782b18fb https://www.encodeproject.org/files/ENCFF553GDL/@@download/ENCFF553GDL.bam GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample poor library complexity, severe bottlenecking extremely low read depth ENCFF558EIZ bam unfiltered alignments ENCSR000BNL ChIP-seq EFO:0002067 K562 cell line Homo sapiens SP2-human ENCAB000AKZ DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000QGZ, ENCFF643CGH 410208438 ENCODE Processing Pipeline b8523b03b4f4e04f35e483d46a6ba507 https://www.encodeproject.org/files/ENCFF558EIZ/@@download/ENCFF558EIZ.bam GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample poor library complexity, severe bottlenecking extremely low read depth ENCFF496HGB bam unfiltered alignments ENCSR000BNL ChIP-seq EFO:0002067 K562 cell line Homo sapiens SP2-human ENCAB000AKZ DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000QHG, ENCFF643CGH 1330156641 ENCODE Processing Pipeline dc107d0c923f9401f54f75c0cb5f8754 https://www.encodeproject.org/files/ENCFF496HGB/@@download/ENCFF496HGB.bam GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample poor library complexity, severe bottlenecking extremely low read depth ENCFF375CFX bam alignments ENCSR000BNL ChIP-seq EFO:0002067 K562 cell line Homo sapiens SP2-human ENCAB000AKZ DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000QHG, ENCFF643CGH 645951122 ENCODE Processing Pipeline 210cfa2ec8f12375d335dc0c479f1cb3 https://www.encodeproject.org/files/ENCFF375CFX/@@download/ENCFF375CFX.bam GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample poor library complexity, severe bottlenecking extremely low read depth ENCFF862VOO bam unfiltered alignments ENCSR000BNL ChIP-seq EFO:0002067 K562 cell line Homo sapiens SP2-human ENCAB000AKZ DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000QGZ, ENCFF807MUK 409402714 ENCODE Processing Pipeline d56217be24ed27fd48c2f969b3442d43 https://www.encodeproject.org/files/ENCFF862VOO/@@download/ENCFF862VOO.bam hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample poor library complexity, severe bottlenecking extremely low read depth ENCFF153ANI bam alignments ENCSR000BNL ChIP-seq EFO:0002067 K562 cell line Homo sapiens SP2-human ENCAB000AKZ DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000QGZ, ENCFF807MUK 108794951 ENCODE Processing Pipeline bebd3e182904e0a134c48f2ecb211edb https://www.encodeproject.org/files/ENCFF153ANI/@@download/ENCFF153ANI.bam hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample poor library complexity, severe bottlenecking extremely low read depth ENCFF617ZQA bam unfiltered alignments ENCSR000BNL ChIP-seq EFO:0002067 K562 cell line Homo sapiens SP2-human ENCAB000AKZ DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000QHG, ENCFF807MUK 1326538172 ENCODE Processing Pipeline d32aa244f3fce34fe1c3a7f9e443976d https://www.encodeproject.org/files/ENCFF617ZQA/@@download/ENCFF617ZQA.bam hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample poor library complexity, severe bottlenecking extremely low read depth ENCFF156KFV bam alignments ENCSR000BNL ChIP-seq EFO:0002067 K562 cell line Homo sapiens SP2-human ENCAB000AKZ DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000QHG, ENCFF807MUK 646463085 ENCODE Processing Pipeline 449feb5927fea701db788a2c2e18bff2 https://www.encodeproject.org/files/ENCFF156KFV/@@download/ENCFF156KFV.bam hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample poor library complexity, severe bottlenecking extremely low read depth ENCFF288BKY bam unfiltered alignments ENCSR671GFC ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-TAF7-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1 100 ENCFF098GTH, ENCFF807MUK, ENCFF926UQW 5672809246 ENCODE Processing Pipeline 619ced776359d0ab4d20904fb7744664 https://www.encodeproject.org/files/ENCFF288BKY/@@download/ENCFF288BKY.bam hg19 released missing genetic modification characterization ENCFF499FYB bam unfiltered alignments ENCSR671GFC ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-TAF7-human ENCAB728YTO DNA False 2016-01-14 ENCODE 2 100 ENCFF099UOS, ENCFF790ADI, ENCFF807MUK 5153421658 ENCODE Processing Pipeline 403f79a70a9e4b8a28b6b0b49cffe46f https://www.encodeproject.org/files/ENCFF499FYB/@@download/ENCFF499FYB.bam hg19 released missing genetic modification characterization ENCFF926UQW fastq reads ENCSR671GFC ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-TAF7-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1 1 100 paired-ended 1 ENCFF098GTH 2591212835 Michael Snyder, Stanford 522d135f399dbffe9a67638757eb54f7 SRA:SRR5111940 https://www.encodeproject.org/files/ENCFF926UQW/@@download/ENCFF926UQW.fastq.gz Illumina HiSeq 2000 /files/ENCFF860YMH/ released missing genetic modification characterization ENCFF099UOS fastq reads ENCSR671GFC ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-TAF7-human ENCAB728YTO DNA False 2016-01-14 ENCODE 2 1 100 paired-ended 1 ENCFF790ADI 2377656608 Michael Snyder, Stanford 50ea574c8b29938654e0eecabe4c15da SRA:SRR5111941 https://www.encodeproject.org/files/ENCFF099UOS/@@download/ENCFF099UOS.fastq.gz Illumina HiSeq 2000 /files/ENCFF860YMH/ released missing genetic modification characterization ENCFF790ADI fastq reads ENCSR671GFC ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-TAF7-human ENCAB728YTO DNA False 2016-01-14 ENCODE 2 1 100 paired-ended 2 ENCFF099UOS 2307588617 Michael Snyder, Stanford 07153eed45283699920ecad28a689df4 SRA:SRR5111941 https://www.encodeproject.org/files/ENCFF790ADI/@@download/ENCFF790ADI.fastq.gz Illumina HiSeq 2000 /files/ENCFF769QGP/ released missing genetic modification characterization ENCFF098GTH fastq reads ENCSR671GFC ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-TAF7-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1 1 100 paired-ended 2 ENCFF926UQW 2653142922 Michael Snyder, Stanford 767448936a59843fe492eda25e4139aa SRA:SRR5111940 https://www.encodeproject.org/files/ENCFF098GTH/@@download/ENCFF098GTH.fastq.gz Illumina HiSeq 2000 /files/ENCFF769QGP/ released missing genetic modification characterization ENCFF373VCV bam alignments ENCSR671GFC ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-TAF7-human ENCAB728YTO DNA False 2016-01-14 ENCODE 2 100 ENCFF099UOS, ENCFF790ADI, ENCFF807MUK 3999945910 ENCODE Processing Pipeline f921d90eb2543d86d731dc2d8b238e07 https://www.encodeproject.org/files/ENCFF373VCV/@@download/ENCFF373VCV.bam hg19 released missing genetic modification characterization ENCFF124VCI bam alignments ENCSR671GFC ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-TAF7-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1 100 ENCFF098GTH, ENCFF807MUK, ENCFF926UQW 4581542885 ENCODE Processing Pipeline 747f107adcd5c4b4b76c1e3d32477e0e https://www.encodeproject.org/files/ENCFF124VCI/@@download/ENCFF124VCI.bam hg19 released missing genetic modification characterization ENCFF109QPO bigWig fold change over control ENCSR671GFC ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-TAF7-human ENCAB728YTO DNA False 2016-01-14 ENCODE 2 ENCFF373VCV, ENCFF936MBZ 864807224 ENCODE Processing Pipeline 19ccb0c8b4f1d37213d4297f0cdfdd39 https://www.encodeproject.org/files/ENCFF109QPO/@@download/ENCFF109QPO.bigWig hg19 released missing genetic modification characterization ENCFF202RWJ bigWig signal p-value ENCSR671GFC ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-TAF7-human ENCAB728YTO DNA False 2016-01-14 ENCODE 2 ENCFF373VCV, ENCFF936MBZ 764075863 ENCODE Processing Pipeline 353ba33c6d9c693a4d9b78144878d19b https://www.encodeproject.org/files/ENCFF202RWJ/@@download/ENCFF202RWJ.bigWig hg19 released missing genetic modification characterization ENCFF348ZJL bam unfiltered alignments ENCSR671GFC ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-TAF7-human ENCAB728YTO DNA False 2016-01-14 ENCODE 2 100 ENCFF099UOS, ENCFF643CGH, ENCFF790ADI 5160772138 ENCODE Processing Pipeline 17e98f9c194ece6266afb372cb6cfe6f https://www.encodeproject.org/files/ENCFF348ZJL/@@download/ENCFF348ZJL.bam GRCh38 released missing genetic modification characterization ENCFF611NQA bam unfiltered alignments ENCSR671GFC ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-TAF7-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1 100 ENCFF098GTH, ENCFF643CGH, ENCFF926UQW 5679090262 ENCODE Processing Pipeline 74279c9640c98766d2de7db4b2bdc133 https://www.encodeproject.org/files/ENCFF611NQA/@@download/ENCFF611NQA.bam GRCh38 released missing genetic modification characterization ENCFF931HWG bam alignments ENCSR671GFC ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-TAF7-human ENCAB728YTO DNA False 2016-01-14 ENCODE 2 100 ENCFF099UOS, ENCFF643CGH, ENCFF790ADI 4001845676 ENCODE Processing Pipeline adb719d0ad46240ef1c3a5d20c9164d0 https://www.encodeproject.org/files/ENCFF931HWG/@@download/ENCFF931HWG.bam GRCh38 released missing genetic modification characterization ENCFF562PEW bam alignments ENCSR671GFC ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-TAF7-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1 100 ENCFF098GTH, ENCFF643CGH, ENCFF926UQW 4584921995 ENCODE Processing Pipeline 3565c96ef7c3f2ce6312257d175908ba https://www.encodeproject.org/files/ENCFF562PEW/@@download/ENCFF562PEW.bam GRCh38 released missing genetic modification characterization ENCFF841GEU bigWig signal p-value ENCSR671GFC ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-TAF7-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1 ENCFF562PEW, ENCFF700BKM 972331394 ENCODE Processing Pipeline 0afdee8e182a1f0e7919c61ec61705d2 https://www.encodeproject.org/files/ENCFF841GEU/@@download/ENCFF841GEU.bigWig GRCh38 released missing genetic modification characterization ENCFF883ACU bigWig signal p-value ENCSR671GFC ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-TAF7-human ENCAB728YTO DNA False 2016-01-14 ENCODE 2 ENCFF700BKM, ENCFF931HWG 888255828 ENCODE Processing Pipeline bdc104b14f170e4890442172c58b8340 https://www.encodeproject.org/files/ENCFF883ACU/@@download/ENCFF883ACU.bigWig GRCh38 released missing genetic modification characterization ENCFF546GCR bigWig signal p-value ENCSR671GFC ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-TAF7-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF562PEW, ENCFF700BKM, ENCFF931HWG 950353628 ENCODE Processing Pipeline 896688be746c3fc1cd391df88e0c6872 https://www.encodeproject.org/files/ENCFF546GCR/@@download/ENCFF546GCR.bigWig GRCh38 released missing genetic modification characterization ENCFF244ZUH bigWig fold change over control ENCSR671GFC ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-TAF7-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1 ENCFF562PEW, ENCFF700BKM 1023194020 ENCODE Processing Pipeline 416fef4da4cbc1b838343b54eed056b7 https://www.encodeproject.org/files/ENCFF244ZUH/@@download/ENCFF244ZUH.bigWig GRCh38 released missing genetic modification characterization ENCFF756YGO bigWig fold change over control ENCSR671GFC ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-TAF7-human ENCAB728YTO DNA False 2016-01-14 ENCODE 2 ENCFF700BKM, ENCFF931HWG 857360577 ENCODE Processing Pipeline c1ef9db2d30022ee130586b313ab933e https://www.encodeproject.org/files/ENCFF756YGO/@@download/ENCFF756YGO.bigWig GRCh38 released missing genetic modification characterization ENCFF446TLB bigWig fold change over control ENCSR671GFC ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-TAF7-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF562PEW, ENCFF700BKM, ENCFF931HWG 1506158467 ENCODE Processing Pipeline 5387575559ce56ada5b67b3975746eec https://www.encodeproject.org/files/ENCFF446TLB/@@download/ENCFF446TLB.bigWig GRCh38 released missing genetic modification characterization ENCFF410LYI bed narrowPeak peaks ENCSR671GFC ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-TAF7-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1 ENCFF562PEW, ENCFF700BKM 5925947 ENCODE Processing Pipeline 9299dd6e7ba9c5c6ce6bbb48871ca2b4 https://www.encodeproject.org/files/ENCFF410LYI/@@download/ENCFF410LYI.bed.gz GRCh38 released missing genetic modification characterization ENCFF837QOE bigBed narrowPeak peaks ENCSR671GFC ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-TAF7-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1 ENCFF410LYI 11221987 ENCODE Processing Pipeline 448bbee848b1dd603f49ef1a6421659c https://www.encodeproject.org/files/ENCFF837QOE/@@download/ENCFF837QOE.bigBed GRCh38 released missing genetic modification characterization ENCFF774XTZ bigBed narrowPeak peaks ENCSR671GFC ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-TAF7-human ENCAB728YTO DNA False 2016-01-14 ENCODE 2 ENCFF752QBL 11180416 ENCODE Processing Pipeline 4d975921398ff528f87317d2177ae925 https://www.encodeproject.org/files/ENCFF774XTZ/@@download/ENCFF774XTZ.bigBed GRCh38 released missing genetic modification characterization ENCFF400FKO bed narrowPeak peaks ENCSR671GFC ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-TAF7-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF562PEW, ENCFF700BKM, ENCFF931HWG 6736983 ENCODE Processing Pipeline 513e2047a5ec34c46cca53daa3030837 https://www.encodeproject.org/files/ENCFF400FKO/@@download/ENCFF400FKO.bed.gz GRCh38 released missing genetic modification characterization ENCFF253LPG bigBed narrowPeak peaks ENCSR671GFC ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-TAF7-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF400FKO 13123034 ENCODE Processing Pipeline d8bea45355a4542730115d5911492c79 https://www.encodeproject.org/files/ENCFF253LPG/@@download/ENCFF253LPG.bigBed GRCh38 released missing genetic modification characterization ENCFF752QBL bed narrowPeak peaks ENCSR671GFC ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-TAF7-human ENCAB728YTO DNA False 2016-01-14 ENCODE 2 ENCFF700BKM, ENCFF931HWG 5917778 ENCODE Processing Pipeline 31dcb882a4e018ea1b2224f147f0905a https://www.encodeproject.org/files/ENCFF752QBL/@@download/ENCFF752QBL.bed.gz GRCh38 released missing genetic modification characterization ENCFF323RGW bed narrowPeak optimal idr thresholded peaks ENCSR671GFC ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-TAF7-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF400FKO, ENCFF410LYI, ENCFF419RSJ, ENCFF752QBL 225739 ENCODE Processing Pipeline c230989b1a11aa4663f27432d27e71aa https://www.encodeproject.org/files/ENCFF323RGW/@@download/ENCFF323RGW.bed.gz GRCh38 released missing genetic modification characterization ENCFF337QPO bigBed narrowPeak optimal idr thresholded peaks ENCSR671GFC ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-TAF7-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF323RGW 438055 ENCODE Processing Pipeline 8672f922174b32df4301b8751923c01a https://www.encodeproject.org/files/ENCFF337QPO/@@download/ENCFF337QPO.bigBed GRCh38 released missing genetic modification characterization ENCFF465BGX bed narrowPeak conservative idr thresholded peaks ENCSR671GFC ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-TAF7-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF400FKO, ENCFF410LYI, ENCFF419RSJ, ENCFF752QBL 190571 ENCODE Processing Pipeline a76f48885f2a412d34b5c7e223b2d4fd https://www.encodeproject.org/files/ENCFF465BGX/@@download/ENCFF465BGX.bed.gz GRCh38 released missing genetic modification characterization ENCFF152IVA bigBed narrowPeak conservative idr thresholded peaks ENCSR671GFC ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-TAF7-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF465BGX 387939 ENCODE Processing Pipeline 9354b3ed2c8864835597dd577c7d61d5 https://www.encodeproject.org/files/ENCFF152IVA/@@download/ENCFF152IVA.bigBed GRCh38 released missing genetic modification characterization ENCFF869TGI bed narrowPeak peaks ENCSR671GFC ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-TAF7-human ENCAB728YTO DNA False 2016-01-14 ENCODE 2 ENCFF373VCV, ENCFF936MBZ 5921029 ENCODE Processing Pipeline 5368257bee17f7e891c75689b2cf46b8 https://www.encodeproject.org/files/ENCFF869TGI/@@download/ENCFF869TGI.bed.gz hg19 released missing genetic modification characterization ENCFF827LZB bed narrowPeak peaks ENCSR671GFC ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-TAF7-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF124VCI, ENCFF373VCV, ENCFF936MBZ 6731420 ENCODE Processing Pipeline f7013f62747402c1c0cd7c4493d0be63 https://www.encodeproject.org/files/ENCFF827LZB/@@download/ENCFF827LZB.bed.gz hg19 released missing genetic modification characterization ENCFF411DIA bed narrowPeak optimal idr thresholded peaks ENCSR671GFC ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-TAF7-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF001TDO, ENCFF827LZB, ENCFF869TGI, ENCFF963EUU 225811 ENCODE Processing Pipeline 43ce1eff00a6b8021cc73f72e80b62a5 https://www.encodeproject.org/files/ENCFF411DIA/@@download/ENCFF411DIA.bed.gz hg19 released missing genetic modification characterization ENCFF980QUR bigWig signal p-value ENCSR671GFC ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-TAF7-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1 ENCFF124VCI, ENCFF936MBZ 970523520 ENCODE Processing Pipeline fff0c4d96d211e735572c78f1d347e2a https://www.encodeproject.org/files/ENCFF980QUR/@@download/ENCFF980QUR.bigWig hg19 released missing genetic modification characterization ENCFF080SUU bigWig fold change over control ENCSR671GFC ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-TAF7-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF124VCI, ENCFF373VCV, ENCFF936MBZ 1495861483 ENCODE Processing Pipeline 9d2e43de4a6507d7b622313caf59b2e9 https://www.encodeproject.org/files/ENCFF080SUU/@@download/ENCFF080SUU.bigWig hg19 released missing genetic modification characterization ENCFF161OTR bigBed narrowPeak peaks ENCSR671GFC ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-TAF7-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF827LZB 13102845 ENCODE Processing Pipeline e4feb01c2927956a7a10428f1e152973 https://www.encodeproject.org/files/ENCFF161OTR/@@download/ENCFF161OTR.bigBed hg19 released missing genetic modification characterization ENCFF540SCI bigWig fold change over control ENCSR671GFC ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-TAF7-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1 ENCFF124VCI, ENCFF936MBZ 1023917989 ENCODE Processing Pipeline 06f5bac083a35cf0543468600152e5de https://www.encodeproject.org/files/ENCFF540SCI/@@download/ENCFF540SCI.bigWig hg19 released missing genetic modification characterization ENCFF511GKD bed narrowPeak conservative idr thresholded peaks ENCSR671GFC ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-TAF7-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF001TDO, ENCFF827LZB, ENCFF869TGI, ENCFF963EUU 189282 ENCODE Processing Pipeline aea82ce28d87dadadcda001193b5001d https://www.encodeproject.org/files/ENCFF511GKD/@@download/ENCFF511GKD.bed.gz hg19 released missing genetic modification characterization ENCFF996RDA bigBed narrowPeak optimal idr thresholded peaks ENCSR671GFC ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-TAF7-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF411DIA 434607 ENCODE Processing Pipeline e6dbd769c7eb8b11a9772fbdc403f68a https://www.encodeproject.org/files/ENCFF996RDA/@@download/ENCFF996RDA.bigBed hg19 released missing genetic modification characterization ENCFF918WJZ bigBed narrowPeak peaks ENCSR671GFC ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-TAF7-human ENCAB728YTO DNA False 2016-01-14 ENCODE 2 ENCFF869TGI 11169486 ENCODE Processing Pipeline 2ac9816858220c48faf1e671b43ed51d https://www.encodeproject.org/files/ENCFF918WJZ/@@download/ENCFF918WJZ.bigBed hg19 released missing genetic modification characterization ENCFF030RAC bigBed narrowPeak conservative idr thresholded peaks ENCSR671GFC ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-TAF7-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF511GKD 382995 ENCODE Processing Pipeline 3dcf7c576d30417cde6ffb1f178009b3 https://www.encodeproject.org/files/ENCFF030RAC/@@download/ENCFF030RAC.bigBed hg19 released missing genetic modification characterization ENCFF270CUI bigWig signal p-value ENCSR671GFC ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-TAF7-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF124VCI, ENCFF373VCV, ENCFF936MBZ 944641146 ENCODE Processing Pipeline 2f85a9c769e66db9b7b3572e770974a8 https://www.encodeproject.org/files/ENCFF270CUI/@@download/ENCFF270CUI.bigWig hg19 released missing genetic modification characterization ENCFF963EUU bed narrowPeak peaks ENCSR671GFC ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-TAF7-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1 ENCFF124VCI, ENCFF936MBZ 5923434 ENCODE Processing Pipeline d068345d605435fcf94906b86ce05688 https://www.encodeproject.org/files/ENCFF963EUU/@@download/ENCFF963EUU.bed.gz hg19 released missing genetic modification characterization ENCFF217AQB bigBed narrowPeak peaks ENCSR671GFC ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-TAF7-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1 ENCFF963EUU 11200690 ENCODE Processing Pipeline 3f896eab6d3a4e7a141df6a9b6e0be51 https://www.encodeproject.org/files/ENCFF217AQB/@@download/ENCFF217AQB.bigBed hg19 released missing genetic modification characterization ENCFF000ZTU bigBed narrowPeak peaks ENCSR000DKA ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-GATA2-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE ENCFF001VRI 1206450 Kevin White, UChicago 787b293d4deb840b373bb00481e02ead https://www.encodeproject.org/files/ENCFF000ZTU/@@download/ENCFF000ZTU.bigBed hg19 archived low read depth, missing genetic modification characterization, low read length insufficient replicate concordance ENCFF000ZTV bam alignments ENCSR000DKA ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-GATA2-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 557170969 Kevin White, UChicago bc5ea7d0770a0ee6f9e9aa50173d56d6 https://www.encodeproject.org/files/ENCFF000ZTV/@@download/ENCFF000ZTV.bam hg19 archived low read depth, missing genetic modification characterization, low read length missing derived_from insufficient replicate concordance ENCFF000ZTW bigWig signal ENCSR000DKA ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-GATA2-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 293323200 Kevin White, UChicago 4c4772065c94e2322e4037478b0d2b03 https://www.encodeproject.org/files/ENCFF000ZTW/@@download/ENCFF000ZTW.bigWig hg19 archived low read depth, missing genetic modification characterization, low read length missing derived_from insufficient replicate concordance ENCFF000ZTX bam alignments ENCSR000DKA ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-GATA2-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 881221125 Kevin White, UChicago bf331637890b133047c147385d557f04 https://www.encodeproject.org/files/ENCFF000ZTX/@@download/ENCFF000ZTX.bam hg19 archived low read depth, missing genetic modification characterization, low read length missing derived_from insufficient replicate concordance ENCFF000ZUB fastq reads ENCSR000DKA ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-GATA2-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 1 1 36 single-ended 906298007 Kevin White, UChicago 1a7f744b33a6cbd77eb4f014f19e0677 https://www.encodeproject.org/files/ENCFF000ZUB/@@download/ENCFF000ZUB.fastq.gz Illumina Genome Analyzer II /files/ENCFF000ZVJ/ released low read depth, missing genetic modification characterization, low read length insufficient replicate concordance ENCFF000ZUK fastq reads ENCSR000DKA ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-GATA2-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 2 1 36 single-ended 1102030713 Kevin White, UChicago e8bb45c0bb2ea5d23e81d2f02a3d5baf https://www.encodeproject.org/files/ENCFF000ZUK/@@download/ENCFF000ZUK.fastq.gz Illumina Genome Analyzer II /files/ENCFF000ZVP/ released low read depth, missing genetic modification characterization, low read length insufficient replicate concordance ENCFF001VRI bed narrowPeak peaks ENCSR000DKA ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-GATA2-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 770970 Kevin White, UChicago 64b38546e77f71b87310cbeb7c3bf5d2 https://www.encodeproject.org/files/ENCFF001VRI/@@download/ENCFF001VRI.bed.gz hg19 archived low read depth, missing genetic modification characterization, low read length missing derived_from insufficient replicate concordance ENCFF002DDW bed narrowPeak optimal idr thresholded peaks ENCSR000DKA ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-GATA2-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 259658 ENCODE Consortium Analysis Working Group 0418ee5601643d9817ef8322430bf64c https://www.encodeproject.org/files/ENCFF002DDW/@@download/ENCFF002DDW.bed.gz hg19 archived low read depth, missing genetic modification characterization, low read length missing derived_from insufficient replicate concordance ENCFF642PKG bigBed narrowPeak optimal idr thresholded peaks ENCSR000DKA ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-GATA2-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE ENCFF002DDW 642148 ENCODE Consortium 10427edf0fc46a3f1f8e9fc89503fe7e https://www.encodeproject.org/files/ENCFF642PKG/@@download/ENCFF642PKG.bigBed hg19 archived low read depth, missing genetic modification characterization, low read length insufficient replicate concordance ENCFF925YOB bam unfiltered alignments ENCSR000DKA ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-GATA2-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 2 36 ENCFF000ZUK, ENCFF643CGH 1341231885 ENCODE Processing Pipeline 190eedfd86f226a546f4f6ca7e66bbc8 https://www.encodeproject.org/files/ENCFF925YOB/@@download/ENCFF925YOB.bam GRCh38 released low read depth, missing genetic modification characterization, low read length insufficient replicate concordance ENCFF939IDF bam unfiltered alignments ENCSR000DKA ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-GATA2-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 1 36 ENCFF000ZUB, ENCFF643CGH 1097482832 ENCODE Processing Pipeline d658d1effb040c29c04413cd30c93895 https://www.encodeproject.org/files/ENCFF939IDF/@@download/ENCFF939IDF.bam GRCh38 released low read depth, missing genetic modification characterization, low read length insufficient replicate concordance ENCFF716QYC bam unfiltered alignments ENCSR000DKA ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-GATA2-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 1 36 ENCFF000ZUB, ENCFF807MUK 1093666545 ENCODE Processing Pipeline 76c30cfd90a66449b502c34548f468b5 https://www.encodeproject.org/files/ENCFF716QYC/@@download/ENCFF716QYC.bam hg19 released low read depth, missing genetic modification characterization, low read length insufficient replicate concordance ENCFF880ZXO bam alignments ENCSR000DKA ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-GATA2-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 2 36 ENCFF000ZUK, ENCFF643CGH 891818812 ENCODE Processing Pipeline 036ad6a56f21e7e33473fdc83b190004 https://www.encodeproject.org/files/ENCFF880ZXO/@@download/ENCFF880ZXO.bam GRCh38 released low read depth, missing genetic modification characterization, low read length insufficient replicate concordance ENCFF082TOF bam alignments ENCSR000DKA ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-GATA2-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 1 36 ENCFF000ZUB, ENCFF643CGH 772685495 ENCODE Processing Pipeline 7fe39ce528b6fa92f551d554b5fe39cd https://www.encodeproject.org/files/ENCFF082TOF/@@download/ENCFF082TOF.bam GRCh38 released low read depth, missing genetic modification characterization, low read length insufficient replicate concordance ENCFF479NOE bam alignments ENCSR000DKA ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-GATA2-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 1 36 ENCFF000ZUB, ENCFF807MUK 773077535 ENCODE Processing Pipeline 097134d1b04a991df449988484c14655 https://www.encodeproject.org/files/ENCFF479NOE/@@download/ENCFF479NOE.bam hg19 released low read depth, missing genetic modification characterization, low read length insufficient replicate concordance ENCFF498TWR bam unfiltered alignments ENCSR000DKA ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-GATA2-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 2 36 ENCFF000ZUK, ENCFF807MUK 1333933871 ENCODE Processing Pipeline 2d5b8453f5ab7359b5b8e2feb08a2a53 https://www.encodeproject.org/files/ENCFF498TWR/@@download/ENCFF498TWR.bam hg19 released low read depth, missing genetic modification characterization, low read length insufficient replicate concordance ENCFF237CLM bam alignments ENCSR000DKA ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-GATA2-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 2 36 ENCFF000ZUK, ENCFF807MUK 892320034 ENCODE Processing Pipeline ec311d7a26efcc2327eea1264b3f172f https://www.encodeproject.org/files/ENCFF237CLM/@@download/ENCFF237CLM.bam hg19 released low read depth, missing genetic modification characterization, low read length insufficient replicate concordance ENCFF647USW bigWig signal p-value ENCSR000DKA ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-GATA2-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 1 ENCFF082TOF, ENCFF240RBJ, ENCFF510BRO 644783874 ENCODE Processing Pipeline 662ca3a1156908814705dc3f8816bcb9 https://www.encodeproject.org/files/ENCFF647USW/@@download/ENCFF647USW.bigWig GRCh38 released low read depth, missing genetic modification characterization, low read length insufficient replicate concordance ENCFF373KER bigWig signal p-value ENCSR000DKA ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-GATA2-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 1 ENCFF479NOE, ENCFF647LGE, ENCFF998TMC 625669351 ENCODE Processing Pipeline 1a7a88eb29d7edfba509deba7263435d https://www.encodeproject.org/files/ENCFF373KER/@@download/ENCFF373KER.bigWig hg19 released low read depth, missing genetic modification characterization, low read length insufficient replicate concordance ENCFF716MRV bigWig signal p-value ENCSR000DKA ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-GATA2-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 2 ENCFF510BRO, ENCFF880ZXO 442926380 ENCODE Processing Pipeline cc0c5bf0bb24d43b75e6de75f3bb9ca9 https://www.encodeproject.org/files/ENCFF716MRV/@@download/ENCFF716MRV.bigWig GRCh38 released low read depth, missing genetic modification characterization, low read length insufficient replicate concordance ENCFF185FTA bigWig signal p-value ENCSR000DKA ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-GATA2-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 1, 2 ENCFF082TOF, ENCFF240RBJ, ENCFF510BRO, ENCFF880ZXO 895354735 ENCODE Processing Pipeline 1304e9d12e857b4054971db5e93c878c https://www.encodeproject.org/files/ENCFF185FTA/@@download/ENCFF185FTA.bigWig GRCh38 released low read depth, missing genetic modification characterization, low read length insufficient replicate concordance ENCFF106ZFR bigWig signal p-value ENCSR000DKA ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-GATA2-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 2 ENCFF237CLM, ENCFF998TMC 443475098 ENCODE Processing Pipeline f7bd9d4bcded16b6cd816ee80dacd2a4 https://www.encodeproject.org/files/ENCFF106ZFR/@@download/ENCFF106ZFR.bigWig hg19 released low read depth, missing genetic modification characterization, low read length insufficient replicate concordance ENCFF508NAI bigWig signal p-value ENCSR000DKA ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-GATA2-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 1, 2 ENCFF237CLM, ENCFF479NOE, ENCFF647LGE, ENCFF998TMC 886524775 ENCODE Processing Pipeline e7074510afdd280fe009309aa8adf944 https://www.encodeproject.org/files/ENCFF508NAI/@@download/ENCFF508NAI.bigWig hg19 released low read depth, missing genetic modification characterization, low read length insufficient replicate concordance ENCFF382CKL bigWig fold change over control ENCSR000DKA ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-GATA2-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 1 ENCFF082TOF, ENCFF240RBJ, ENCFF510BRO 561759379 ENCODE Processing Pipeline d20f10f3b15289209093310c0f4f5b7a https://www.encodeproject.org/files/ENCFF382CKL/@@download/ENCFF382CKL.bigWig GRCh38 released low read depth, missing genetic modification characterization, low read length insufficient replicate concordance ENCFF467ICU bigWig fold change over control ENCSR000DKA ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-GATA2-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 1 ENCFF479NOE, ENCFF647LGE, ENCFF998TMC 561997003 ENCODE Processing Pipeline f56e699c767a09fa71af450a22db29fe https://www.encodeproject.org/files/ENCFF467ICU/@@download/ENCFF467ICU.bigWig hg19 released low read depth, missing genetic modification characterization, low read length insufficient replicate concordance ENCFF343YGK bigWig fold change over control ENCSR000DKA ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-GATA2-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 2 ENCFF510BRO, ENCFF880ZXO 430229126 ENCODE Processing Pipeline 04d8abd4a80ef7d4b256d9e022477c07 https://www.encodeproject.org/files/ENCFF343YGK/@@download/ENCFF343YGK.bigWig GRCh38 released low read depth, missing genetic modification characterization, low read length insufficient replicate concordance ENCFF533LHP bigWig fold change over control ENCSR000DKA ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-GATA2-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 2 ENCFF237CLM, ENCFF998TMC 431218366 ENCODE Processing Pipeline 5bff693f4b23c031bdddb567d37536b1 https://www.encodeproject.org/files/ENCFF533LHP/@@download/ENCFF533LHP.bigWig hg19 released low read depth, missing genetic modification characterization, low read length insufficient replicate concordance ENCFF497LRA bed narrowPeak peaks ENCSR000DKA ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-GATA2-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 1 ENCFF082TOF, ENCFF240RBJ, ENCFF510BRO 6724265 ENCODE Processing Pipeline 5b959489a4fdb4f721d7a2695c3f6079 https://www.encodeproject.org/files/ENCFF497LRA/@@download/ENCFF497LRA.bed.gz GRCh38 released low read depth, missing genetic modification characterization, low read length insufficient replicate concordance ENCFF879COR bigWig fold change over control ENCSR000DKA ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-GATA2-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 1, 2 ENCFF082TOF, ENCFF240RBJ, ENCFF510BRO, ENCFF880ZXO 892001569 ENCODE Processing Pipeline 77b73cc61c7381ed5408619b7eed506c https://www.encodeproject.org/files/ENCFF879COR/@@download/ENCFF879COR.bigWig GRCh38 released low read depth, missing genetic modification characterization, low read length insufficient replicate concordance ENCFF148KWA bigWig fold change over control ENCSR000DKA ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-GATA2-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 1, 2 ENCFF237CLM, ENCFF479NOE, ENCFF647LGE, ENCFF998TMC 879134871 ENCODE Processing Pipeline 8ce767eb0c1e63d53f8a8725f4e0eaf7 https://www.encodeproject.org/files/ENCFF148KWA/@@download/ENCFF148KWA.bigWig hg19 released low read depth, missing genetic modification characterization, low read length insufficient replicate concordance ENCFF960LWB bed narrowPeak peaks ENCSR000DKA ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-GATA2-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 2 ENCFF510BRO, ENCFF880ZXO 4392936 ENCODE Processing Pipeline 6df184b646ff792f12ea19a54b11110a https://www.encodeproject.org/files/ENCFF960LWB/@@download/ENCFF960LWB.bed.gz GRCh38 released low read depth, missing genetic modification characterization, low read length insufficient replicate concordance ENCFF185LGX bed narrowPeak peaks ENCSR000DKA ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-GATA2-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 1 ENCFF479NOE, ENCFF647LGE, ENCFF998TMC 6732109 ENCODE Processing Pipeline 6389b0de0c4dd822db5e985c1821aee5 https://www.encodeproject.org/files/ENCFF185LGX/@@download/ENCFF185LGX.bed.gz hg19 released low read depth, missing genetic modification characterization, low read length insufficient replicate concordance ENCFF776QVY bed narrowPeak peaks ENCSR000DKA ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-GATA2-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 1, 2 ENCFF082TOF, ENCFF240RBJ, ENCFF510BRO, ENCFF880ZXO 6883715 ENCODE Processing Pipeline c941381935683b1e91a01147dee2df40 https://www.encodeproject.org/files/ENCFF776QVY/@@download/ENCFF776QVY.bed.gz GRCh38 released low read depth, missing genetic modification characterization, low read length insufficient replicate concordance ENCFF628YBF bigBed narrowPeak peaks ENCSR000DKA ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-GATA2-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 1 ENCFF497LRA 12603324 ENCODE Processing Pipeline 7d9618b8402e380c07d2fec5ae3f8fae https://www.encodeproject.org/files/ENCFF628YBF/@@download/ENCFF628YBF.bigBed GRCh38 released low read depth, missing genetic modification characterization, low read length insufficient replicate concordance ENCFF766MMM bed narrowPeak peaks ENCSR000DKA ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-GATA2-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 1, 2 ENCFF237CLM, ENCFF479NOE, ENCFF647LGE, ENCFF998TMC 6894146 ENCODE Processing Pipeline 1191f50298ae3451a569e328ac65e919 https://www.encodeproject.org/files/ENCFF766MMM/@@download/ENCFF766MMM.bed.gz hg19 released low read depth, missing genetic modification characterization, low read length insufficient replicate concordance ENCFF444LYN bed narrowPeak peaks ENCSR000DKA ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-GATA2-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 2 ENCFF237CLM, ENCFF998TMC 4401824 ENCODE Processing Pipeline b2a6cdd23e21ed9fac80af72438d8161 https://www.encodeproject.org/files/ENCFF444LYN/@@download/ENCFF444LYN.bed.gz hg19 released low read depth, missing genetic modification characterization, low read length insufficient replicate concordance ENCFF541TAI bigBed narrowPeak peaks ENCSR000DKA ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-GATA2-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 2 ENCFF960LWB 10893477 ENCODE Processing Pipeline 3536355cf363690db15a4beb44580396 https://www.encodeproject.org/files/ENCFF541TAI/@@download/ENCFF541TAI.bigBed GRCh38 released low read depth, missing genetic modification characterization, low read length insufficient replicate concordance ENCFF435WAV bigBed narrowPeak peaks ENCSR000DKA ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-GATA2-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 2 ENCFF444LYN 10888797 ENCODE Processing Pipeline 933d6d944957089ff810c8ea8c7197ac https://www.encodeproject.org/files/ENCFF435WAV/@@download/ENCFF435WAV.bigBed hg19 released low read depth, missing genetic modification characterization, low read length insufficient replicate concordance ENCFF626KQA bigBed narrowPeak peaks ENCSR000DKA ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-GATA2-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 1, 2 ENCFF766MMM 12930378 ENCODE Processing Pipeline 518c72a385c06925b269efe127af2677 https://www.encodeproject.org/files/ENCFF626KQA/@@download/ENCFF626KQA.bigBed hg19 released low read depth, missing genetic modification characterization, low read length insufficient replicate concordance ENCFF879REQ bed narrowPeak conservative idr thresholded peaks ENCSR000DKA ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-GATA2-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 1, 2 ENCFF001TDO, ENCFF185LGX, ENCFF444LYN, ENCFF766MMM 160165 ENCODE Processing Pipeline f13dd0fa61360b2d42d1a03660019329 https://www.encodeproject.org/files/ENCFF879REQ/@@download/ENCFF879REQ.bed.gz hg19 released low read depth, missing genetic modification characterization, low read length insufficient replicate concordance ENCFF997NUA bed narrowPeak optimal idr thresholded peaks ENCSR000DKA ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-GATA2-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 1, 2 ENCFF419RSJ, ENCFF497LRA, ENCFF776QVY, ENCFF960LWB 367057 ENCODE Processing Pipeline 6e6fbb7e4e34db3c1698ef089d41790b https://www.encodeproject.org/files/ENCFF997NUA/@@download/ENCFF997NUA.bed.gz GRCh38 released low read depth, missing genetic modification characterization, low read length insufficient replicate concordance ENCFF600PRL bigBed narrowPeak peaks ENCSR000DKA ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-GATA2-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 1, 2 ENCFF776QVY 12949072 ENCODE Processing Pipeline 9b7dbcbc49c1884c59b1e440dd96e59b https://www.encodeproject.org/files/ENCFF600PRL/@@download/ENCFF600PRL.bigBed GRCh38 released low read depth, missing genetic modification characterization, low read length insufficient replicate concordance ENCFF174QFT bigBed narrowPeak conservative idr thresholded peaks ENCSR000DKA ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-GATA2-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 1, 2 ENCFF333IVK 399026 ENCODE Processing Pipeline 8ec17b4b218297e05b4461d2413c5d33 https://www.encodeproject.org/files/ENCFF174QFT/@@download/ENCFF174QFT.bigBed GRCh38 released low read depth, missing genetic modification characterization, low read length insufficient replicate concordance ENCFF989DVP bigBed narrowPeak optimal idr thresholded peaks ENCSR000DKA ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-GATA2-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 1, 2 ENCFF997NUA 729707 ENCODE Processing Pipeline 353ffa34757b8547e27b25a5df8592c6 https://www.encodeproject.org/files/ENCFF989DVP/@@download/ENCFF989DVP.bigBed GRCh38 released low read depth, missing genetic modification characterization, low read length insufficient replicate concordance ENCFF625CLQ bigBed narrowPeak conservative idr thresholded peaks ENCSR000DKA ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-GATA2-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 1, 2 ENCFF879REQ 396360 ENCODE Processing Pipeline c9f1493d4bf3dbc6e3bcc10264b4d4a7 https://www.encodeproject.org/files/ENCFF625CLQ/@@download/ENCFF625CLQ.bigBed hg19 released low read depth, missing genetic modification characterization, low read length insufficient replicate concordance ENCFF298GGE bigBed narrowPeak peaks ENCSR000DKA ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-GATA2-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 1 ENCFF185LGX 12608651 ENCODE Processing Pipeline beebb2d62b6d7ed5b73cb189fd44a02c https://www.encodeproject.org/files/ENCFF298GGE/@@download/ENCFF298GGE.bigBed hg19 released low read depth, missing genetic modification characterization, low read length insufficient replicate concordance ENCFF333IVK bed narrowPeak conservative idr thresholded peaks ENCSR000DKA ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-GATA2-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 1, 2 ENCFF419RSJ, ENCFF497LRA, ENCFF776QVY, ENCFF960LWB 160956 ENCODE Processing Pipeline 8e08a706ad3498fd94909dc46d52daf0 https://www.encodeproject.org/files/ENCFF333IVK/@@download/ENCFF333IVK.bed.gz GRCh38 released low read depth, missing genetic modification characterization, low read length insufficient replicate concordance ENCFF929YBC bed narrowPeak optimal idr thresholded peaks ENCSR000DKA ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-GATA2-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 1, 2 ENCFF001TDO, ENCFF185LGX, ENCFF444LYN, ENCFF766MMM 366797 ENCODE Processing Pipeline c240b9984e20cb1538912c0c4aa2b41c https://www.encodeproject.org/files/ENCFF929YBC/@@download/ENCFF929YBC.bed.gz hg19 released low read depth, missing genetic modification characterization, low read length insufficient replicate concordance ENCFF940HFQ bigBed narrowPeak optimal idr thresholded peaks ENCSR000DKA ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-GATA2-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 1, 2 ENCFF929YBC 727463 ENCODE Processing Pipeline 944ca031074a14f7586cee57dbbb075e https://www.encodeproject.org/files/ENCFF940HFQ/@@download/ENCFF940HFQ.bigBed hg19 released low read depth, missing genetic modification characterization, low read length insufficient replicate concordance ENCFF420HGF bam unfiltered alignments ENCSR502OEK ChIP-seq EFO:0002067 K562 cell line Homo sapiens ELF1-human ENCAB778OCV DNA False 2016-07-28 ENCODE 2 100 ENCFF070OBA, ENCFF807MUK, ENCFF932JXG 4440172472 ENCODE Processing Pipeline e2d94163f0bff23fc9fffc1574c29da4 https://www.encodeproject.org/files/ENCFF420HGF/@@download/ENCFF420HGF.bam hg19 released low read depth, antibody characterized with exemption ENCFF521KVL bam unfiltered alignments ENCSR502OEK ChIP-seq EFO:0002067 K562 cell line Homo sapiens ELF1-human ENCAB778OCV DNA False 2016-07-28 ENCODE 1 100 ENCFF132GWN, ENCFF456MJL, ENCFF807MUK 4245534120 ENCODE Processing Pipeline 4c101f5dd0aa22ad58e98eeb031ee155 https://www.encodeproject.org/files/ENCFF521KVL/@@download/ENCFF521KVL.bam hg19 released low read depth, antibody characterized with exemption ENCFF456MJL fastq reads ENCSR502OEK ChIP-seq EFO:0002067 K562 cell line Homo sapiens ELF1-human ENCAB778OCV DNA False 2016-07-28 ENCODE 1 1 100 paired-ended 2 ENCFF132GWN 1951606118 Michael Snyder, Stanford 818e216c969a6e36049a0ce766c4cfee SRA:SRR5111683 https://www.encodeproject.org/files/ENCFF456MJL/@@download/ENCFF456MJL.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFH/ released low read depth, antibody characterized with exemption ENCFF070OBA fastq reads ENCSR502OEK ChIP-seq EFO:0002067 K562 cell line Homo sapiens ELF1-human ENCAB778OCV DNA False 2016-07-28 ENCODE 2 1 100 paired-ended 2 ENCFF932JXG 2018681182 Michael Snyder, Stanford ef87a3b3e0b4a1238050dd887a08b0fd SRA:SRR5111682 https://www.encodeproject.org/files/ENCFF070OBA/@@download/ENCFF070OBA.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFA/ released low read depth, antibody characterized with exemption ENCFF932JXG fastq reads ENCSR502OEK ChIP-seq EFO:0002067 K562 cell line Homo sapiens ELF1-human ENCAB778OCV DNA False 2016-07-28 ENCODE 2 1 100 paired-ended 1 ENCFF070OBA 1986905309 Michael Snyder, Stanford d63f7f294d4177db63999a043beefba7 SRA:SRR5111682 https://www.encodeproject.org/files/ENCFF932JXG/@@download/ENCFF932JXG.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFD/ released low read depth, antibody characterized with exemption ENCFF132GWN fastq reads ENCSR502OEK ChIP-seq EFO:0002067 K562 cell line Homo sapiens ELF1-human ENCAB778OCV DNA False 2016-07-28 ENCODE 1 1 100 paired-ended 1 ENCFF456MJL 1918173349 Michael Snyder, Stanford 904cfe4d436ecbaa6a5e0bf5697e453f SRA:SRR5111683 https://www.encodeproject.org/files/ENCFF132GWN/@@download/ENCFF132GWN.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFF/ released low read depth, antibody characterized with exemption ENCFF791XQO bam alignments ENCSR502OEK ChIP-seq EFO:0002067 K562 cell line Homo sapiens ELF1-human ENCAB778OCV DNA False 2016-07-28 ENCODE 2 100 ENCFF070OBA, ENCFF807MUK, ENCFF932JXG 3661782619 ENCODE Processing Pipeline 5bf642119f8cfc455453e9b17e874782 https://www.encodeproject.org/files/ENCFF791XQO/@@download/ENCFF791XQO.bam hg19 released low read depth, antibody characterized with exemption ENCFF357FKU bam alignments ENCSR502OEK ChIP-seq EFO:0002067 K562 cell line Homo sapiens ELF1-human ENCAB778OCV DNA False 2016-07-28 ENCODE 1 100 ENCFF132GWN, ENCFF456MJL, ENCFF807MUK 3358306386 ENCODE Processing Pipeline 42af36af156e1540cfb597156e1a2f47 https://www.encodeproject.org/files/ENCFF357FKU/@@download/ENCFF357FKU.bam hg19 released low read depth, antibody characterized with exemption ENCFF128GGQ bigWig signal p-value ENCSR502OEK ChIP-seq EFO:0002067 K562 cell line Homo sapiens ELF1-human ENCAB778OCV DNA False 2016-07-28 ENCODE 1 ENCFF357FKU, ENCFF581ZJL 1065105045 ENCODE Processing Pipeline 22651c2e8aa2ac9691e137cc2cd3ddea https://www.encodeproject.org/files/ENCFF128GGQ/@@download/ENCFF128GGQ.bigWig hg19 released low read depth, antibody characterized with exemption ENCFF423BRV bigWig signal p-value ENCSR502OEK ChIP-seq EFO:0002067 K562 cell line Homo sapiens ELF1-human ENCAB778OCV DNA False 2016-07-28 ENCODE 2 ENCFF051LWI, ENCFF791XQO 1120309392 ENCODE Processing Pipeline 7f0430ddeea9f976f777ef7cbebc6ae2 https://www.encodeproject.org/files/ENCFF423BRV/@@download/ENCFF423BRV.bigWig hg19 released low read depth, antibody characterized with exemption ENCFF377ENC bigWig signal p-value ENCSR502OEK ChIP-seq EFO:0002067 K562 cell line Homo sapiens ELF1-human ENCAB778OCV DNA False 2016-07-28 ENCODE 1, 2 ENCFF051LWI, ENCFF357FKU, ENCFF581ZJL, ENCFF791XQO 1924299218 ENCODE Processing Pipeline 9d97e202ea209ae691aeb830b5179f02 https://www.encodeproject.org/files/ENCFF377ENC/@@download/ENCFF377ENC.bigWig hg19 released low read depth, antibody characterized with exemption ENCFF406UKY bigWig fold change over control ENCSR502OEK ChIP-seq EFO:0002067 K562 cell line Homo sapiens ELF1-human ENCAB778OCV DNA False 2016-07-28 ENCODE 1 ENCFF357FKU, ENCFF581ZJL 1099444917 ENCODE Processing Pipeline 204c7ae693c890c1d740132a52225281 https://www.encodeproject.org/files/ENCFF406UKY/@@download/ENCFF406UKY.bigWig hg19 released low read depth, antibody characterized with exemption ENCFF413QJH bigWig fold change over control ENCSR502OEK ChIP-seq EFO:0002067 K562 cell line Homo sapiens ELF1-human ENCAB778OCV DNA False 2016-07-28 ENCODE 2 ENCFF051LWI, ENCFF791XQO 1086047011 ENCODE Processing Pipeline 50fda4e6679e516e2f0cea4e77c0b000 https://www.encodeproject.org/files/ENCFF413QJH/@@download/ENCFF413QJH.bigWig hg19 released low read depth, antibody characterized with exemption ENCFF725PEY bed narrowPeak peaks ENCSR502OEK ChIP-seq EFO:0002067 K562 cell line Homo sapiens ELF1-human ENCAB778OCV DNA False 2016-07-28 ENCODE 1, 2 ENCFF051LWI, ENCFF357FKU, ENCFF581ZJL, ENCFF791XQO 7262863 ENCODE Processing Pipeline 54ba1f98062c391f062ccdd5e1d221a1 https://www.encodeproject.org/files/ENCFF725PEY/@@download/ENCFF725PEY.bed.gz hg19 released low read depth, antibody characterized with exemption ENCFF813JVU bed narrowPeak peaks ENCSR502OEK ChIP-seq EFO:0002067 K562 cell line Homo sapiens ELF1-human ENCAB778OCV DNA False 2016-07-28 ENCODE 2 ENCFF051LWI, ENCFF791XQO 6793802 ENCODE Processing Pipeline f2494b346b270c93b3bc1584d8375fab https://www.encodeproject.org/files/ENCFF813JVU/@@download/ENCFF813JVU.bed.gz hg19 released low read depth, antibody characterized with exemption ENCFF963YVX bigWig fold change over control ENCSR502OEK ChIP-seq EFO:0002067 K562 cell line Homo sapiens ELF1-human ENCAB778OCV DNA False 2016-07-28 ENCODE 1, 2 ENCFF051LWI, ENCFF357FKU, ENCFF581ZJL, ENCFF791XQO 1984827323 ENCODE Processing Pipeline 9beb405bb7a35839e50de3d8ef6e465a https://www.encodeproject.org/files/ENCFF963YVX/@@download/ENCFF963YVX.bigWig hg19 released low read depth, antibody characterized with exemption ENCFF582BFZ bigBed narrowPeak peaks ENCSR502OEK ChIP-seq EFO:0002067 K562 cell line Homo sapiens ELF1-human ENCAB778OCV DNA False 2016-07-28 ENCODE 2 ENCFF813JVU 13290444 ENCODE Processing Pipeline 7858bc164e05ca0f26fe5fb91d568590 https://www.encodeproject.org/files/ENCFF582BFZ/@@download/ENCFF582BFZ.bigBed hg19 released low read depth, antibody characterized with exemption ENCFF205MSU bigBed narrowPeak peaks ENCSR502OEK ChIP-seq EFO:0002067 K562 cell line Homo sapiens ELF1-human ENCAB778OCV DNA False 2016-07-28 ENCODE 1, 2 ENCFF725PEY 13130333 ENCODE Processing Pipeline 58c62f61361fe90ae45f21921d9a8649 https://www.encodeproject.org/files/ENCFF205MSU/@@download/ENCFF205MSU.bigBed hg19 released low read depth, antibody characterized with exemption ENCFF883ZAE bed narrowPeak peaks ENCSR502OEK ChIP-seq EFO:0002067 K562 cell line Homo sapiens ELF1-human ENCAB778OCV DNA False 2016-07-28 ENCODE 1 ENCFF357FKU, ENCFF581ZJL 6932385 ENCODE Processing Pipeline 973b8e66a7e34eae1cbfafbd7b88fd0a https://www.encodeproject.org/files/ENCFF883ZAE/@@download/ENCFF883ZAE.bed.gz hg19 released low read depth, antibody characterized with exemption ENCFF195JRH bigBed narrowPeak peaks ENCSR502OEK ChIP-seq EFO:0002067 K562 cell line Homo sapiens ELF1-human ENCAB778OCV DNA False 2016-07-28 ENCODE 1 ENCFF883ZAE 13211467 ENCODE Processing Pipeline 26538fd520f27f44d3086354f6314410 https://www.encodeproject.org/files/ENCFF195JRH/@@download/ENCFF195JRH.bigBed hg19 released low read depth, antibody characterized with exemption ENCFF713WWL bam unfiltered alignments ENCSR502OEK ChIP-seq EFO:0002067 K562 cell line Homo sapiens ELF1-human ENCAB778OCV DNA False 2016-07-28 ENCODE 1 100 ENCFF132GWN, ENCFF456MJL, ENCFF643CGH 4248206380 ENCODE Processing Pipeline 58e60d313778382f1c33cf11c5b72a62 https://www.encodeproject.org/files/ENCFF713WWL/@@download/ENCFF713WWL.bam GRCh38 released low read depth, antibody characterized with exemption ENCFF561PIE bam unfiltered alignments ENCSR502OEK ChIP-seq EFO:0002067 K562 cell line Homo sapiens ELF1-human ENCAB778OCV DNA False 2016-07-28 ENCODE 2 100 ENCFF070OBA, ENCFF643CGH, ENCFF932JXG 4443547613 ENCODE Processing Pipeline 6d1d7ac8c1d451d504ba5dae97d78964 https://www.encodeproject.org/files/ENCFF561PIE/@@download/ENCFF561PIE.bam GRCh38 released low read depth, antibody characterized with exemption ENCFF477CYZ bam alignments ENCSR502OEK ChIP-seq EFO:0002067 K562 cell line Homo sapiens ELF1-human ENCAB778OCV DNA False 2016-07-28 ENCODE 2 100 ENCFF070OBA, ENCFF643CGH, ENCFF932JXG 3664233820 ENCODE Processing Pipeline 78463c0bc26579f7ed15a6e2c37c1885 https://www.encodeproject.org/files/ENCFF477CYZ/@@download/ENCFF477CYZ.bam GRCh38 released low read depth, antibody characterized with exemption ENCFF784MTZ bam alignments ENCSR502OEK ChIP-seq EFO:0002067 K562 cell line Homo sapiens ELF1-human ENCAB778OCV DNA False 2016-07-28 ENCODE 1 100 ENCFF132GWN, ENCFF456MJL, ENCFF643CGH 3360905951 ENCODE Processing Pipeline 3b637168a899e31881e1e34073926a8b https://www.encodeproject.org/files/ENCFF784MTZ/@@download/ENCFF784MTZ.bam GRCh38 released low read depth, antibody characterized with exemption ENCFF717NBT bigWig signal p-value ENCSR502OEK ChIP-seq EFO:0002067 K562 cell line Homo sapiens ELF1-human ENCAB778OCV DNA False 2016-07-28 ENCODE 1 ENCFF784MTZ, ENCFF910IKB 1090845610 ENCODE Processing Pipeline 1c5def2c6e28f3f7e637bd9c30176e31 https://www.encodeproject.org/files/ENCFF717NBT/@@download/ENCFF717NBT.bigWig GRCh38 released low read depth, antibody characterized with exemption ENCFF869GYL bigWig signal p-value ENCSR502OEK ChIP-seq EFO:0002067 K562 cell line Homo sapiens ELF1-human ENCAB778OCV DNA False 2016-07-28 ENCODE 2 ENCFF227IZS, ENCFF477CYZ 935002825 ENCODE Processing Pipeline 1465de265ab84cbbb5316d2b95fd767b https://www.encodeproject.org/files/ENCFF869GYL/@@download/ENCFF869GYL.bigWig GRCh38 released low read depth, antibody characterized with exemption ENCFF655YRZ bigWig signal p-value ENCSR502OEK ChIP-seq EFO:0002067 K562 cell line Homo sapiens ELF1-human ENCAB778OCV DNA False 2016-07-28 ENCODE 1, 2 ENCFF227IZS, ENCFF477CYZ, ENCFF784MTZ, ENCFF910IKB 1583703791 ENCODE Processing Pipeline c7e6266d741ecf40075ffd9a0c13d12b https://www.encodeproject.org/files/ENCFF655YRZ/@@download/ENCFF655YRZ.bigWig GRCh38 released low read depth, antibody characterized with exemption ENCFF718EYL bigWig fold change over control ENCSR502OEK ChIP-seq EFO:0002067 K562 cell line Homo sapiens ELF1-human ENCAB778OCV DNA False 2016-07-28 ENCODE 1 ENCFF784MTZ, ENCFF910IKB 1099672671 ENCODE Processing Pipeline 81c3a9d99fd038946459e577bfdae697 https://www.encodeproject.org/files/ENCFF718EYL/@@download/ENCFF718EYL.bigWig GRCh38 released low read depth, antibody characterized with exemption ENCFF343LFE bigWig fold change over control ENCSR502OEK ChIP-seq EFO:0002067 K562 cell line Homo sapiens ELF1-human ENCAB778OCV DNA False 2016-07-28 ENCODE 2 ENCFF227IZS, ENCFF477CYZ 1111169502 ENCODE Processing Pipeline df8b9f40172c0328398c0c9ad21d2ca1 https://www.encodeproject.org/files/ENCFF343LFE/@@download/ENCFF343LFE.bigWig GRCh38 released low read depth, antibody characterized with exemption ENCFF036DKA bigWig fold change over control ENCSR502OEK ChIP-seq EFO:0002067 K562 cell line Homo sapiens ELF1-human ENCAB778OCV DNA False 2016-07-28 ENCODE 1, 2 ENCFF227IZS, ENCFF477CYZ, ENCFF784MTZ, ENCFF910IKB 1981881911 ENCODE Processing Pipeline 4c0f6d3c2e386de4aae0a80ab13d84cb https://www.encodeproject.org/files/ENCFF036DKA/@@download/ENCFF036DKA.bigWig GRCh38 released low read depth, antibody characterized with exemption ENCFF925NTW bed narrowPeak peaks ENCSR502OEK ChIP-seq EFO:0002067 K562 cell line Homo sapiens ELF1-human ENCAB778OCV DNA False 2016-07-28 ENCODE 1 ENCFF784MTZ, ENCFF910IKB 6823064 ENCODE Processing Pipeline 89be9e45d1bbc045ef667766bc21a48e https://www.encodeproject.org/files/ENCFF925NTW/@@download/ENCFF925NTW.bed.gz GRCh38 released low read depth, antibody characterized with exemption ENCFF009QBO bed narrowPeak peaks ENCSR502OEK ChIP-seq EFO:0002067 K562 cell line Homo sapiens ELF1-human ENCAB778OCV DNA False 2016-07-28 ENCODE 2 ENCFF227IZS, ENCFF477CYZ 6680199 ENCODE Processing Pipeline 388f40761313b2cfc884ce6ceb5cfcb4 https://www.encodeproject.org/files/ENCFF009QBO/@@download/ENCFF009QBO.bed.gz GRCh38 released low read depth, antibody characterized with exemption ENCFF334KUA bed narrowPeak peaks ENCSR502OEK ChIP-seq EFO:0002067 K562 cell line Homo sapiens ELF1-human ENCAB778OCV DNA False 2016-07-28 ENCODE 1, 2 ENCFF227IZS, ENCFF477CYZ, ENCFF784MTZ, ENCFF910IKB 7205587 ENCODE Processing Pipeline f439a70db82dc7eb70f8b4a1a5af42fb https://www.encodeproject.org/files/ENCFF334KUA/@@download/ENCFF334KUA.bed.gz GRCh38 released low read depth, antibody characterized with exemption ENCFF493AAS bigBed narrowPeak peaks ENCSR502OEK ChIP-seq EFO:0002067 K562 cell line Homo sapiens ELF1-human ENCAB778OCV DNA False 2016-07-28 ENCODE 1 ENCFF925NTW 13205922 ENCODE Processing Pipeline 24f7ffea7ab7e837ded40843942c9f93 https://www.encodeproject.org/files/ENCFF493AAS/@@download/ENCFF493AAS.bigBed GRCh38 released low read depth, antibody characterized with exemption ENCFF091FSB bigBed narrowPeak peaks ENCSR502OEK ChIP-seq EFO:0002067 K562 cell line Homo sapiens ELF1-human ENCAB778OCV DNA False 2016-07-28 ENCODE 2 ENCFF009QBO 13287828 ENCODE Processing Pipeline 0b653b25f64c65aedb35f0dfa315469e https://www.encodeproject.org/files/ENCFF091FSB/@@download/ENCFF091FSB.bigBed GRCh38 released low read depth, antibody characterized with exemption ENCFF660YGI bigBed narrowPeak peaks ENCSR502OEK ChIP-seq EFO:0002067 K562 cell line Homo sapiens ELF1-human ENCAB778OCV DNA False 2016-07-28 ENCODE 1, 2 ENCFF334KUA 13091112 ENCODE Processing Pipeline 57e0cbc3d0f95e56e202f970aa1b02c8 https://www.encodeproject.org/files/ENCFF660YGI/@@download/ENCFF660YGI.bigBed GRCh38 released low read depth, antibody characterized with exemption ENCFF667LOH bed narrowPeak conservative idr thresholded peaks ENCSR502OEK ChIP-seq EFO:0002067 K562 cell line Homo sapiens ELF1-human ENCAB778OCV DNA False 2016-07-28 ENCODE 1, 2 ENCFF009QBO, ENCFF334KUA, ENCFF419RSJ, ENCFF925NTW 239726 ENCODE Processing Pipeline a8854b3a59c290552fedc6d254ca85fb https://www.encodeproject.org/files/ENCFF667LOH/@@download/ENCFF667LOH.bed.gz GRCh38 released low read depth, antibody characterized with exemption ENCFF445NDR bigBed narrowPeak conservative idr thresholded peaks ENCSR502OEK ChIP-seq EFO:0002067 K562 cell line Homo sapiens ELF1-human ENCAB778OCV DNA False 2016-07-28 ENCODE 1, 2 ENCFF667LOH 572952 ENCODE Processing Pipeline a83d36c2c24e58256921475de36eaee3 https://www.encodeproject.org/files/ENCFF445NDR/@@download/ENCFF445NDR.bigBed GRCh38 released low read depth, antibody characterized with exemption ENCFF617ZLL bed narrowPeak optimal idr thresholded peaks ENCSR502OEK ChIP-seq EFO:0002067 K562 cell line Homo sapiens ELF1-human ENCAB778OCV DNA False 2016-07-28 ENCODE 1, 2 ENCFF009QBO, ENCFF334KUA, ENCFF419RSJ, ENCFF925NTW 307664 ENCODE Processing Pipeline 7acca57727469981d879609a9141e3af https://www.encodeproject.org/files/ENCFF617ZLL/@@download/ENCFF617ZLL.bed.gz GRCh38 released low read depth, antibody characterized with exemption ENCFF050KWC bigBed narrowPeak optimal idr thresholded peaks ENCSR502OEK ChIP-seq EFO:0002067 K562 cell line Homo sapiens ELF1-human ENCAB778OCV DNA False 2016-07-28 ENCODE 1, 2 ENCFF617ZLL 685934 ENCODE Processing Pipeline c97d0fd866349f989af9adfda48a0f88 https://www.encodeproject.org/files/ENCFF050KWC/@@download/ENCFF050KWC.bigBed GRCh38 released low read depth, antibody characterized with exemption ENCFF067ZUO bed narrowPeak conservative idr thresholded peaks ENCSR502OEK ChIP-seq EFO:0002067 K562 cell line Homo sapiens ELF1-human ENCAB778OCV DNA False 2016-07-28 ENCODE 1, 2 ENCFF001TDO, ENCFF725PEY, ENCFF813JVU, ENCFF883ZAE 210435 ENCODE Processing Pipeline a9fea1f3a6f7a66e764e52804a09f322 https://www.encodeproject.org/files/ENCFF067ZUO/@@download/ENCFF067ZUO.bed.gz hg19 released low read depth, antibody characterized with exemption ENCFF621HYF bigBed narrowPeak conservative idr thresholded peaks ENCSR502OEK ChIP-seq EFO:0002067 K562 cell line Homo sapiens ELF1-human ENCAB778OCV DNA False 2016-07-28 ENCODE 1, 2 ENCFF067ZUO 421820 ENCODE Processing Pipeline a2cee6d8696d42388ff45fe777a2cbd5 https://www.encodeproject.org/files/ENCFF621HYF/@@download/ENCFF621HYF.bigBed hg19 released low read depth, antibody characterized with exemption ENCFF392MUM bed narrowPeak optimal idr thresholded peaks ENCSR502OEK ChIP-seq EFO:0002067 K562 cell line Homo sapiens ELF1-human ENCAB778OCV DNA False 2016-07-28 ENCODE 1, 2 ENCFF001TDO, ENCFF725PEY, ENCFF813JVU, ENCFF883ZAE 271048 ENCODE Processing Pipeline feec5c83ee0073bfeead5b1f269e553f https://www.encodeproject.org/files/ENCFF392MUM/@@download/ENCFF392MUM.bed.gz hg19 released low read depth, antibody characterized with exemption ENCFF455XRK bigBed narrowPeak optimal idr thresholded peaks ENCSR502OEK ChIP-seq EFO:0002067 K562 cell line Homo sapiens ELF1-human ENCAB778OCV DNA False 2016-07-28 ENCODE 1, 2 ENCFF392MUM 498794 ENCODE Processing Pipeline 5400613a8e68a437cbdbfa99f03bee47 https://www.encodeproject.org/files/ENCFF455XRK/@@download/ENCFF455XRK.bigBed hg19 released low read depth, antibody characterized with exemption ENCFF071WQM bam unfiltered alignments ENCSR416QLJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CEBPB-human ENCAB728YTO DNA False 2016-01-14 ENCODE 2 100 ENCFF470OUZ, ENCFF555QJQ, ENCFF807MUK 6544008049 ENCODE Processing Pipeline 02fc59d70bb781ede274b6c2423eae89 https://www.encodeproject.org/files/ENCFF071WQM/@@download/ENCFF071WQM.bam hg19 released missing genetic modification characterization missing control alignments ENCFF783XJP bam unfiltered alignments ENCSR416QLJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CEBPB-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1 100 ENCFF052XOQ, ENCFF156EZY, ENCFF807MUK 6405764636 ENCODE Processing Pipeline d32385d9b7b5d3638666520349b96f7c https://www.encodeproject.org/files/ENCFF783XJP/@@download/ENCFF783XJP.bam hg19 released missing genetic modification characterization missing control alignments ENCFF555QJQ fastq reads ENCSR416QLJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CEBPB-human ENCAB728YTO DNA False 2016-01-14 ENCODE 2 1 100 paired-ended 2 ENCFF470OUZ 3033976451 Michael Snyder, Stanford 9099da2d40ae029c41fab8f6cf5750c0 SRA:SRR5111561 https://www.encodeproject.org/files/ENCFF555QJQ/@@download/ENCFF555QJQ.fastq.gz Illumina HiSeq 2000 /files/ENCFF962SMK/ released missing genetic modification characterization missing control alignments ENCFF156EZY fastq reads ENCSR416QLJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CEBPB-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1 1 100 paired-ended 1 ENCFF052XOQ 2955791855 Michael Snyder, Stanford 8ca0dcdc6c27934f5f099529a7ffaac3 SRA:SRR5111560 https://www.encodeproject.org/files/ENCFF156EZY/@@download/ENCFF156EZY.fastq.gz Illumina HiSeq 2000 /files/ENCFF168MST/ released missing genetic modification characterization missing control alignments ENCFF052XOQ fastq reads ENCSR416QLJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CEBPB-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1 1 100 paired-ended 2 ENCFF156EZY 2957732440 Michael Snyder, Stanford ca01e723abbd52f45ee712a2a1268e59 SRA:SRR5111560 https://www.encodeproject.org/files/ENCFF052XOQ/@@download/ENCFF052XOQ.fastq.gz Illumina HiSeq 2000 /files/ENCFF962SMK/ released missing genetic modification characterization missing control alignments ENCFF470OUZ fastq reads ENCSR416QLJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CEBPB-human ENCAB728YTO DNA False 2016-01-14 ENCODE 2 1 100 paired-ended 1 ENCFF555QJQ 3031128498 Michael Snyder, Stanford 617fe70006baddc443924b316483ce3d SRA:SRR5111561 https://www.encodeproject.org/files/ENCFF470OUZ/@@download/ENCFF470OUZ.fastq.gz Illumina HiSeq 2000 /files/ENCFF168MST/ released missing genetic modification characterization missing control alignments ENCFF014ABI bam alignments ENCSR416QLJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CEBPB-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1 100 ENCFF052XOQ, ENCFF156EZY, ENCFF807MUK 5602767251 ENCODE Processing Pipeline 03cfc53293c16e417ab5440104db2fdf https://www.encodeproject.org/files/ENCFF014ABI/@@download/ENCFF014ABI.bam hg19 released missing genetic modification characterization missing control alignments ENCFF951SEJ bam alignments ENCSR416QLJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CEBPB-human ENCAB728YTO DNA False 2016-01-14 ENCODE 2 100 ENCFF470OUZ, ENCFF555QJQ, ENCFF807MUK 5721027203 ENCODE Processing Pipeline 28cd6efbabcf46b53c027a74e148aba5 https://www.encodeproject.org/files/ENCFF951SEJ/@@download/ENCFF951SEJ.bam hg19 released missing genetic modification characterization missing control alignments ENCFF936TIN bigWig signal p-value ENCSR416QLJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CEBPB-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1 ENCFF014ABI, ENCFF242UOG 1243098769 ENCODE Processing Pipeline 340a127ae581a716f4af6dd633f56bcf https://www.encodeproject.org/files/ENCFF936TIN/@@download/ENCFF936TIN.bigWig hg19 released missing genetic modification characterization missing control alignments ENCFF473XBO bigWig signal p-value ENCSR416QLJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CEBPB-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF014ABI, ENCFF242UOG, ENCFF951SEJ 1225003974 ENCODE Processing Pipeline a9377766f71f18a9dd7827851136dc35 https://www.encodeproject.org/files/ENCFF473XBO/@@download/ENCFF473XBO.bigWig hg19 released missing genetic modification characterization missing control alignments ENCFF647RXB bigWig fold change over control ENCSR416QLJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CEBPB-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1 ENCFF014ABI, ENCFF242UOG 1259830615 ENCODE Processing Pipeline c58a5ae2200cd6e36624dce9b53054b0 https://www.encodeproject.org/files/ENCFF647RXB/@@download/ENCFF647RXB.bigWig hg19 released missing genetic modification characterization missing control alignments ENCFF212NWU bigWig fold change over control ENCSR416QLJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CEBPB-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF014ABI, ENCFF242UOG, ENCFF951SEJ 1921876324 ENCODE Processing Pipeline d226d8f762dc6bb0fcfba60425644e88 https://www.encodeproject.org/files/ENCFF212NWU/@@download/ENCFF212NWU.bigWig hg19 released missing genetic modification characterization missing control alignments ENCFF260QKA bam unfiltered alignments ENCSR416QLJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CEBPB-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1 100 ENCFF052XOQ, ENCFF156EZY, ENCFF643CGH 6417292076 ENCODE Processing Pipeline 3ad8091a3f5bc18d820d05791619209a https://www.encodeproject.org/files/ENCFF260QKA/@@download/ENCFF260QKA.bam GRCh38 released missing genetic modification characterization missing control alignments ENCFF273RLA bam unfiltered alignments ENCSR416QLJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CEBPB-human ENCAB728YTO DNA False 2016-01-14 ENCODE 2 100 ENCFF470OUZ, ENCFF555QJQ, ENCFF643CGH 6555484222 ENCODE Processing Pipeline b11f23e3b355e7d7b0c8241a98e8407f https://www.encodeproject.org/files/ENCFF273RLA/@@download/ENCFF273RLA.bam GRCh38 released missing genetic modification characterization missing control alignments ENCFF002PNZ bam alignments ENCSR416QLJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CEBPB-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1 100 ENCFF052XOQ, ENCFF156EZY, ENCFF643CGH 5606367215 ENCODE Processing Pipeline 11aa9814636ded704a8a79a070202559 https://www.encodeproject.org/files/ENCFF002PNZ/@@download/ENCFF002PNZ.bam GRCh38 released missing genetic modification characterization missing control alignments ENCFF346SNT bam alignments ENCSR416QLJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CEBPB-human ENCAB728YTO DNA False 2016-01-14 ENCODE 2 100 ENCFF470OUZ, ENCFF555QJQ, ENCFF643CGH 5724769452 ENCODE Processing Pipeline a3a472c27be53e071a704fba11e5eb4b https://www.encodeproject.org/files/ENCFF346SNT/@@download/ENCFF346SNT.bam GRCh38 released missing genetic modification characterization missing control alignments ENCFF190WRD bigWig signal p-value ENCSR416QLJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CEBPB-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1 ENCFF002PNZ 1249786121 ENCODE Processing Pipeline a0953fea9fd367b7cfe668e6ae1affb8 https://www.encodeproject.org/files/ENCFF190WRD/@@download/ENCFF190WRD.bigWig GRCh38 released missing genetic modification characterization missing control alignments ENCFF673HVA bigWig signal p-value ENCSR416QLJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CEBPB-human ENCAB728YTO DNA False 2016-01-14 ENCODE 2 ENCFF346SNT 1240314492 ENCODE Processing Pipeline c36f28b45471d0e0752740e84c67dc48 https://www.encodeproject.org/files/ENCFF673HVA/@@download/ENCFF673HVA.bigWig GRCh38 released missing genetic modification characterization missing control alignments ENCFF722BTU bigWig signal p-value ENCSR416QLJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CEBPB-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF002PNZ, ENCFF346SNT 1215854624 ENCODE Processing Pipeline 4447c64ea938e78a114e9039c8f61af4 https://www.encodeproject.org/files/ENCFF722BTU/@@download/ENCFF722BTU.bigWig GRCh38 released missing genetic modification characterization missing control alignments ENCFF085DMU bigWig fold change over control ENCSR416QLJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CEBPB-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1 ENCFF002PNZ 1267551776 ENCODE Processing Pipeline 3ec7512cfb0a074f4681244eea54445c https://www.encodeproject.org/files/ENCFF085DMU/@@download/ENCFF085DMU.bigWig GRCh38 released missing genetic modification characterization missing control alignments ENCFF116TBG bigWig fold change over control ENCSR416QLJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CEBPB-human ENCAB728YTO DNA False 2016-01-14 ENCODE 2 ENCFF346SNT 1280933669 ENCODE Processing Pipeline 77c8f60645327cfd4818f006464c542b https://www.encodeproject.org/files/ENCFF116TBG/@@download/ENCFF116TBG.bigWig GRCh38 released missing genetic modification characterization missing control alignments ENCFF988PMK bigWig fold change over control ENCSR416QLJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CEBPB-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF002PNZ, ENCFF346SNT 1906953283 ENCODE Processing Pipeline dab836604df6b9fd9a521e5441514bbb https://www.encodeproject.org/files/ENCFF988PMK/@@download/ENCFF988PMK.bigWig GRCh38 released missing genetic modification characterization missing control alignments ENCFF266QUX bed narrowPeak peaks ENCSR416QLJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CEBPB-human ENCAB728YTO DNA False 2016-01-14 ENCODE 2 ENCFF346SNT 7071353 ENCODE Processing Pipeline f859676fb70a9aa05e4aed818d55c2d7 https://www.encodeproject.org/files/ENCFF266QUX/@@download/ENCFF266QUX.bed.gz GRCh38 released missing genetic modification characterization missing control alignments ENCFF817YUO bigBed narrowPeak peaks ENCSR416QLJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CEBPB-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1 ENCFF658HYK 13341527 ENCODE Processing Pipeline bea845e92926c1746c93877ec50f9f57 https://www.encodeproject.org/files/ENCFF817YUO/@@download/ENCFF817YUO.bigBed GRCh38 released missing genetic modification characterization missing control alignments ENCFF317ONF bigBed narrowPeak peaks ENCSR416QLJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CEBPB-human ENCAB728YTO DNA False 2016-01-14 ENCODE 2 ENCFF266QUX 13262660 ENCODE Processing Pipeline 8167cd7b6d1f7b9c497364543a715b76 https://www.encodeproject.org/files/ENCFF317ONF/@@download/ENCFF317ONF.bigBed GRCh38 released missing genetic modification characterization missing control alignments ENCFF658HYK bed narrowPeak peaks ENCSR416QLJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CEBPB-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1 ENCFF002PNZ 7133643 ENCODE Processing Pipeline c6957e9a6bc990b1091e536cfb6a34b2 https://www.encodeproject.org/files/ENCFF658HYK/@@download/ENCFF658HYK.bed.gz GRCh38 released missing genetic modification characterization missing control alignments ENCFF074FIK bigBed narrowPeak optimal idr thresholded peaks ENCSR416QLJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CEBPB-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF547SJG 2025143 ENCODE Processing Pipeline ff6013e6963ba38b3cd96ced52493525 https://www.encodeproject.org/files/ENCFF074FIK/@@download/ENCFF074FIK.bigBed GRCh38 released missing genetic modification characterization missing control alignments ENCFF547SJG bed narrowPeak optimal idr thresholded peaks ENCSR416QLJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CEBPB-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF266QUX, ENCFF419RSJ, ENCFF648FRJ, ENCFF658HYK 1166965 ENCODE Processing Pipeline 9566f5e3ed270c2ad7aee15acabe49d0 https://www.encodeproject.org/files/ENCFF547SJG/@@download/ENCFF547SJG.bed.gz GRCh38 released missing genetic modification characterization missing control alignments ENCFF393PNE bigBed narrowPeak peaks ENCSR416QLJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CEBPB-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF648FRJ 13446238 ENCODE Processing Pipeline 2d32189f6a349074031ecc2248a79bde https://www.encodeproject.org/files/ENCFF393PNE/@@download/ENCFF393PNE.bigBed GRCh38 released missing genetic modification characterization missing control alignments ENCFF450DFK bed narrowPeak conservative idr thresholded peaks ENCSR416QLJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CEBPB-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF266QUX, ENCFF419RSJ, ENCFF648FRJ, ENCFF658HYK 998715 ENCODE Processing Pipeline 39df8b81ccfe1cd1c048ee456cd8a9ec https://www.encodeproject.org/files/ENCFF450DFK/@@download/ENCFF450DFK.bed.gz GRCh38 released missing genetic modification characterization missing control alignments ENCFF648FRJ bed narrowPeak peaks ENCSR416QLJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CEBPB-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF002PNZ, ENCFF346SNT 7317100 ENCODE Processing Pipeline 73e98d2139add6336a99283ea6145222 https://www.encodeproject.org/files/ENCFF648FRJ/@@download/ENCFF648FRJ.bed.gz GRCh38 released missing genetic modification characterization missing control alignments ENCFF223LLR bigBed narrowPeak conservative idr thresholded peaks ENCSR416QLJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CEBPB-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF450DFK 1781240 ENCODE Processing Pipeline 476e3ed4ae07686c7c045ce0c96eae08 https://www.encodeproject.org/files/ENCFF223LLR/@@download/ENCFF223LLR.bigBed GRCh38 released missing genetic modification characterization missing control alignments ENCFF913VGC bigWig signal p-value ENCSR416QLJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CEBPB-human ENCAB728YTO DNA False 2016-01-14 ENCODE 2 ENCFF242UOG, ENCFF951SEJ 1247919898 ENCODE Processing Pipeline b62b333c9f264d2c742a206fd6c48257 https://www.encodeproject.org/files/ENCFF913VGC/@@download/ENCFF913VGC.bigWig hg19 released missing genetic modification characterization missing control alignments ENCFF846YSF bigBed narrowPeak peaks ENCSR416QLJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CEBPB-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1 ENCFF408FLA 13362247 ENCODE Processing Pipeline ea76b8ce20b131e14158c30d5ccce80b https://www.encodeproject.org/files/ENCFF846YSF/@@download/ENCFF846YSF.bigBed hg19 released missing genetic modification characterization missing control alignments ENCFF437CNI bigWig fold change over control ENCSR416QLJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CEBPB-human ENCAB728YTO DNA False 2016-01-14 ENCODE 2 ENCFF242UOG, ENCFF951SEJ 1291857610 ENCODE Processing Pipeline cd306948a8850848ca920e1b00e1fc89 https://www.encodeproject.org/files/ENCFF437CNI/@@download/ENCFF437CNI.bigWig hg19 released missing genetic modification characterization missing control alignments ENCFF460QGG bigBed narrowPeak conservative idr thresholded peaks ENCSR416QLJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CEBPB-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF231HJU 1760044 ENCODE Processing Pipeline eaf99ebc59112ad1b6019bb091317b3a https://www.encodeproject.org/files/ENCFF460QGG/@@download/ENCFF460QGG.bigBed hg19 released missing genetic modification characterization missing control alignments ENCFF441YTV bed narrowPeak peaks ENCSR416QLJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CEBPB-human ENCAB728YTO DNA False 2016-01-14 ENCODE 2 ENCFF242UOG, ENCFF951SEJ 7188623 ENCODE Processing Pipeline 6ad9d97abd0b21bcd3a5d072ebdef340 https://www.encodeproject.org/files/ENCFF441YTV/@@download/ENCFF441YTV.bed.gz hg19 released missing genetic modification characterization missing control alignments ENCFF408FLA bed narrowPeak peaks ENCSR416QLJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CEBPB-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1 ENCFF014ABI, ENCFF242UOG 7154927 ENCODE Processing Pipeline 34514dcce76771f625e9a0f6c1b8e49e https://www.encodeproject.org/files/ENCFF408FLA/@@download/ENCFF408FLA.bed.gz hg19 released missing genetic modification characterization missing control alignments ENCFF828JWK bed narrowPeak optimal idr thresholded peaks ENCSR416QLJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CEBPB-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF001TDO, ENCFF408FLA, ENCFF441YTV, ENCFF519FSK 1173339 ENCODE Processing Pipeline 497b62adf65e7673d2d5bc8fa194a587 https://www.encodeproject.org/files/ENCFF828JWK/@@download/ENCFF828JWK.bed.gz hg19 released missing genetic modification characterization missing control alignments ENCFF519FSK bed narrowPeak peaks ENCSR416QLJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CEBPB-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF014ABI, ENCFF242UOG, ENCFF951SEJ 7330610 ENCODE Processing Pipeline b5ec04e6d7e8908d942922c35bb87cf8 https://www.encodeproject.org/files/ENCFF519FSK/@@download/ENCFF519FSK.bed.gz hg19 released missing genetic modification characterization missing control alignments ENCFF242UKP bigBed narrowPeak peaks ENCSR416QLJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CEBPB-human ENCAB728YTO DNA False 2016-01-14 ENCODE 2 ENCFF441YTV 13389002 ENCODE Processing Pipeline bd927cd3a3029cc4c36b33f44b181835 https://www.encodeproject.org/files/ENCFF242UKP/@@download/ENCFF242UKP.bigBed hg19 released missing genetic modification characterization missing control alignments ENCFF231HJU bed narrowPeak conservative idr thresholded peaks ENCSR416QLJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CEBPB-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF001TDO, ENCFF408FLA, ENCFF441YTV, ENCFF519FSK 989683 ENCODE Processing Pipeline 0925d905a9357d38186338a7bbe0d6a5 https://www.encodeproject.org/files/ENCFF231HJU/@@download/ENCFF231HJU.bed.gz hg19 released missing genetic modification characterization missing control alignments ENCFF255RLZ bigBed narrowPeak peaks ENCSR416QLJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CEBPB-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF519FSK 13453537 ENCODE Processing Pipeline dee079f8818a751868e13e4e1187b4d1 https://www.encodeproject.org/files/ENCFF255RLZ/@@download/ENCFF255RLZ.bigBed hg19 released missing genetic modification characterization missing control alignments ENCFF171HTX bigBed narrowPeak optimal idr thresholded peaks ENCSR416QLJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CEBPB-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF828JWK 2022513 ENCODE Processing Pipeline f6b605a63134776280f16b3576085f7f https://www.encodeproject.org/files/ENCFF171HTX/@@download/ENCFF171HTX.bigBed hg19 released missing genetic modification characterization missing control alignments ENCFF528KYA bam unfiltered alignments ENCSR138SFL ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM2-human ENCAB725ZWB DNA False 2017-11-13 ENCODE 1 100 ENCFF516QHN, ENCFF807MUK, ENCFF943CAF 4425708223 ENCODE Processing Pipeline 132e1f844828099489517de1d3eba0dd https://www.encodeproject.org/files/ENCFF528KYA/@@download/ENCFF528KYA.bam hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking experiment not submitted to GEO ENCFF516QHN fastq reads ENCSR138SFL ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM2-human ENCAB725ZWB DNA False 2017-11-13 ENCODE 1 1 100 paired-ended 1 ENCFF943CAF 1997043108 Michael Snyder, Stanford 3e07e9192f119c1caef9b336448c1b56 https://www.encodeproject.org/files/ENCFF516QHN/@@download/ENCFF516QHN.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFF/ released borderline replicate concordance, low read depth, mild to moderate bottlenecking experiment not submitted to GEO ENCFF943CAF fastq reads ENCSR138SFL ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM2-human ENCAB725ZWB DNA False 2017-11-13 ENCODE 1 1 100 paired-ended 2 ENCFF516QHN 2055353844 Michael Snyder, Stanford 2b7be7fff697666811fbf952e310c393 https://www.encodeproject.org/files/ENCFF943CAF/@@download/ENCFF943CAF.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFH/ released borderline replicate concordance, low read depth, mild to moderate bottlenecking experiment not submitted to GEO ENCFF613ITI bam alignments ENCSR138SFL ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM2-human ENCAB725ZWB DNA False 2017-11-13 ENCODE 1 100 ENCFF516QHN, ENCFF807MUK, ENCFF943CAF 3569550645 ENCODE Processing Pipeline 7d59da154e7bb99f3ca44464904ab67b https://www.encodeproject.org/files/ENCFF613ITI/@@download/ENCFF613ITI.bam hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking experiment not submitted to GEO ENCFF806HUN bigWig signal p-value ENCSR138SFL ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM2-human ENCAB725ZWB DNA False 2017-11-13 ENCODE 1 ENCFF581ZJL, ENCFF613ITI 1038703920 ENCODE Processing Pipeline 44c5c484e87456cd2746b0a0777831ae https://www.encodeproject.org/files/ENCFF806HUN/@@download/ENCFF806HUN.bigWig hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking experiment not submitted to GEO ENCFF647PWF bigWig fold change over control ENCSR138SFL ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM2-human ENCAB725ZWB DNA False 2017-11-13 ENCODE 1 ENCFF581ZJL, ENCFF613ITI 1102112612 ENCODE Processing Pipeline 282acfcc5defc526bdd7909a0a8a9ca6 https://www.encodeproject.org/files/ENCFF647PWF/@@download/ENCFF647PWF.bigWig hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking experiment not submitted to GEO ENCFF822VOO fastq reads ENCSR138SFL ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM2-human ENCAB725ZWB DNA False 2017-11-13 ENCODE 3 1 101 paired-ended 1 ENCFF439UCU 1971862518 Michael Snyder, Stanford 68f772e2a1c89d1133ba962f64a31843 https://www.encodeproject.org/files/ENCFF822VOO/@@download/ENCFF822VOO.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFD/ released borderline replicate concordance, low read depth, mild to moderate bottlenecking experiment not submitted to GEO ENCFF439UCU fastq reads ENCSR138SFL ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM2-human ENCAB725ZWB DNA False 2017-11-13 ENCODE 3 1 101 paired-ended 2 ENCFF822VOO 2007254235 Michael Snyder, Stanford 0cad77681d293b7959ca8b6da96ee06c https://www.encodeproject.org/files/ENCFF439UCU/@@download/ENCFF439UCU.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFA/ released borderline replicate concordance, low read depth, mild to moderate bottlenecking experiment not submitted to GEO ENCFF028IYI bam unfiltered alignments ENCSR138SFL ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM2-human ENCAB725ZWB DNA False 2017-11-13 ENCODE 3 101 ENCFF439UCU, ENCFF643CGH, ENCFF822VOO 4023089003 ENCODE Processing Pipeline d79d8d1070c5904d632497da225a6845 https://www.encodeproject.org/files/ENCFF028IYI/@@download/ENCFF028IYI.bam GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking experiment not submitted to GEO ENCFF356BYE bam alignments ENCSR138SFL ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM2-human ENCAB725ZWB DNA False 2017-11-13 ENCODE 3 101 ENCFF439UCU, ENCFF643CGH, ENCFF822VOO 3508195908 ENCODE Processing Pipeline b7a4c443b7de336acd607460f97ef983 https://www.encodeproject.org/files/ENCFF356BYE/@@download/ENCFF356BYE.bam GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking experiment not submitted to GEO ENCFF404QQV bam unfiltered alignments ENCSR138SFL ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM2-human ENCAB725ZWB DNA False 2017-11-13 ENCODE 3 101 ENCFF439UCU, ENCFF807MUK, ENCFF822VOO 4018262401 ENCODE Processing Pipeline 03e29014b870b1e7eadc490ca257dba6 https://www.encodeproject.org/files/ENCFF404QQV/@@download/ENCFF404QQV.bam hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking experiment not submitted to GEO ENCFF881KLW bam alignments ENCSR138SFL ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM2-human ENCAB725ZWB DNA False 2017-11-13 ENCODE 3 101 ENCFF439UCU, ENCFF807MUK, ENCFF822VOO 3507161365 ENCODE Processing Pipeline b6c67d7e88e2b5dbf6e450033f33e30d https://www.encodeproject.org/files/ENCFF881KLW/@@download/ENCFF881KLW.bam hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking experiment not submitted to GEO ENCFF170GHC bam unfiltered alignments ENCSR138SFL ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM2-human ENCAB725ZWB DNA False 2017-11-13 ENCODE 1 100 ENCFF516QHN, ENCFF643CGH, ENCFF943CAF 4430646233 ENCODE Processing Pipeline 33b794799d89785b02eb132007f12048 https://www.encodeproject.org/files/ENCFF170GHC/@@download/ENCFF170GHC.bam GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking experiment not submitted to GEO ENCFF021VLL bam alignments ENCSR138SFL ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM2-human ENCAB725ZWB DNA False 2017-11-13 ENCODE 1 100 ENCFF516QHN, ENCFF643CGH, ENCFF943CAF 3571652453 ENCODE Processing Pipeline f34c7303c29a5a5f7a6236d5b160b80a https://www.encodeproject.org/files/ENCFF021VLL/@@download/ENCFF021VLL.bam GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking experiment not submitted to GEO ENCFF996RNA bigWig signal p-value ENCSR138SFL ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM2-human ENCAB725ZWB DNA False 2017-11-13 ENCODE 3 ENCFF227IZS, ENCFF356BYE 1094614505 ENCODE Processing Pipeline e1c7e0f76ab28d71f03ffb7d55ad2c51 https://www.encodeproject.org/files/ENCFF996RNA/@@download/ENCFF996RNA.bigWig GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking experiment not submitted to GEO ENCFF472TXN bigWig signal p-value ENCSR138SFL ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM2-human ENCAB725ZWB DNA False 2017-11-13 ENCODE 1 ENCFF021VLL, ENCFF910IKB 1076686374 ENCODE Processing Pipeline 22fc38bd55109a6c5cd018206e1b4fe3 https://www.encodeproject.org/files/ENCFF472TXN/@@download/ENCFF472TXN.bigWig GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking experiment not submitted to GEO ENCFF429VEY bigWig signal p-value ENCSR138SFL ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM2-human ENCAB725ZWB DNA False 2017-11-13 ENCODE 1, 3 ENCFF021VLL, ENCFF227IZS, ENCFF356BYE, ENCFF910IKB 1574449704 ENCODE Processing Pipeline feeb2c70eb0df12d2aaf51cd3c951887 https://www.encodeproject.org/files/ENCFF429VEY/@@download/ENCFF429VEY.bigWig GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking experiment not submitted to GEO ENCFF308NHY bigWig fold change over control ENCSR138SFL ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM2-human ENCAB725ZWB DNA False 2017-11-13 ENCODE 1, 3 ENCFF021VLL, ENCFF227IZS, ENCFF356BYE, ENCFF910IKB 1977073518 ENCODE Processing Pipeline 9bb7c6cf3670f76a5135993cc2d4bbd0 https://www.encodeproject.org/files/ENCFF308NHY/@@download/ENCFF308NHY.bigWig GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking experiment not submitted to GEO ENCFF124AFH bigBed narrowPeak conservative idr thresholded peaks ENCSR138SFL ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM2-human ENCAB725ZWB DNA False 2017-11-13 ENCODE 1, 3 ENCFF130MXC 21212 ENCODE Processing Pipeline 7a0501841b93860ebc43c29125a5ef04 https://www.encodeproject.org/files/ENCFF124AFH/@@download/ENCFF124AFH.bigBed GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking experiment not submitted to GEO ENCFF130MXC bed narrowPeak conservative idr thresholded peaks ENCSR138SFL ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM2-human ENCAB725ZWB DNA False 2017-11-13 ENCODE 1, 3 ENCFF008ITM, ENCFF419RSJ, ENCFF642DPR, ENCFF939LTQ 3442 ENCODE Processing Pipeline b02b92c4a0f64c8e745cafb5fff9301c https://www.encodeproject.org/files/ENCFF130MXC/@@download/ENCFF130MXC.bed.gz GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking experiment not submitted to GEO ENCFF043HHG bed narrowPeak optimal idr thresholded peaks ENCSR138SFL ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM2-human ENCAB725ZWB DNA False 2017-11-13 ENCODE 1, 3 ENCFF008ITM, ENCFF419RSJ, ENCFF642DPR, ENCFF939LTQ 8520 ENCODE Processing Pipeline 8ff0c4e146cfe8601a640e74403858e6 https://www.encodeproject.org/files/ENCFF043HHG/@@download/ENCFF043HHG.bed.gz GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking experiment not submitted to GEO ENCFF765TLM bigWig fold change over control ENCSR138SFL ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM2-human ENCAB725ZWB DNA False 2017-11-13 ENCODE 1 ENCFF021VLL, ENCFF910IKB 1089805290 ENCODE Processing Pipeline 38522a81f979891205f0ab9dd34729ea https://www.encodeproject.org/files/ENCFF765TLM/@@download/ENCFF765TLM.bigWig GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking experiment not submitted to GEO ENCFF008ITM bed narrowPeak peaks ENCSR138SFL ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM2-human ENCAB725ZWB DNA False 2017-11-13 ENCODE 1 ENCFF021VLL, ENCFF910IKB 6078039 ENCODE Processing Pipeline fd60b350b788d292449f744ae4fabcd0 https://www.encodeproject.org/files/ENCFF008ITM/@@download/ENCFF008ITM.bed.gz GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking experiment not submitted to GEO ENCFF939LTQ bed narrowPeak peaks ENCSR138SFL ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM2-human ENCAB725ZWB DNA False 2017-11-13 ENCODE 3 ENCFF227IZS, ENCFF356BYE 5654521 ENCODE Processing Pipeline f58e8d9d26f87058a3acdc25238daedd https://www.encodeproject.org/files/ENCFF939LTQ/@@download/ENCFF939LTQ.bed.gz GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking experiment not submitted to GEO ENCFF642DPR bed narrowPeak peaks ENCSR138SFL ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM2-human ENCAB725ZWB DNA False 2017-11-13 ENCODE 1, 3 ENCFF021VLL, ENCFF227IZS, ENCFF356BYE, ENCFF910IKB 6929722 ENCODE Processing Pipeline d90bbee0c3d7e591d22d19b1514ea4d0 https://www.encodeproject.org/files/ENCFF642DPR/@@download/ENCFF642DPR.bed.gz GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking experiment not submitted to GEO ENCFF152NIC bigBed narrowPeak peaks ENCSR138SFL ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM2-human ENCAB725ZWB DNA False 2017-11-13 ENCODE 1 ENCFF008ITM 11167714 ENCODE Processing Pipeline f0fc3154de6ee92147c83479bfe051da https://www.encodeproject.org/files/ENCFF152NIC/@@download/ENCFF152NIC.bigBed GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking experiment not submitted to GEO ENCFF518JUA bigBed narrowPeak peaks ENCSR138SFL ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM2-human ENCAB725ZWB DNA False 2017-11-13 ENCODE 1, 3 ENCFF642DPR 11068585 ENCODE Processing Pipeline a899382008911758d3f90fa484f382a2 https://www.encodeproject.org/files/ENCFF518JUA/@@download/ENCFF518JUA.bigBed GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking experiment not submitted to GEO ENCFF796PYM bigWig fold change over control ENCSR138SFL ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM2-human ENCAB725ZWB DNA False 2017-11-13 ENCODE 3 ENCFF227IZS, ENCFF356BYE 1019707318 ENCODE Processing Pipeline c622b1c4ea8432422c220dd8fe6202ec https://www.encodeproject.org/files/ENCFF796PYM/@@download/ENCFF796PYM.bigWig GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking experiment not submitted to GEO ENCFF159DOK bigBed narrowPeak optimal idr thresholded peaks ENCSR138SFL ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM2-human ENCAB725ZWB DNA False 2017-11-13 ENCODE 1, 3 ENCFF043HHG 76212 ENCODE Processing Pipeline 89da075d7828065d04443ff6a3321b34 https://www.encodeproject.org/files/ENCFF159DOK/@@download/ENCFF159DOK.bigBed GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking experiment not submitted to GEO ENCFF337TRG bigBed narrowPeak peaks ENCSR138SFL ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM2-human ENCAB725ZWB DNA False 2017-11-13 ENCODE 3 ENCFF939LTQ 11152257 ENCODE Processing Pipeline c4471212676408894717348bafaa20f8 https://www.encodeproject.org/files/ENCFF337TRG/@@download/ENCFF337TRG.bigBed GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking experiment not submitted to GEO ENCFF479HNZ bigWig signal p-value ENCSR138SFL ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM2-human ENCAB725ZWB DNA False 2017-11-13 ENCODE 3 ENCFF051LWI, ENCFF881KLW 1008630438 ENCODE Processing Pipeline 39444d63893d8506e368cebaa545988a https://www.encodeproject.org/files/ENCFF479HNZ/@@download/ENCFF479HNZ.bigWig hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking experiment not submitted to GEO ENCFF748BNI bigBed narrowPeak peaks ENCSR138SFL ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM2-human ENCAB725ZWB DNA False 2017-11-13 ENCODE 1 ENCFF741JEM 11149068 ENCODE Processing Pipeline 5024232fb867d8ed7ca858449a670b0d https://www.encodeproject.org/files/ENCFF748BNI/@@download/ENCFF748BNI.bigBed hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking experiment not submitted to GEO ENCFF392XDZ bigBed narrowPeak peaks ENCSR138SFL ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM2-human ENCAB725ZWB DNA False 2017-11-13 ENCODE 1, 3 ENCFF618BMZ 11047113 ENCODE Processing Pipeline 84c583bd5785488962f4216ebd1f3b92 https://www.encodeproject.org/files/ENCFF392XDZ/@@download/ENCFF392XDZ.bigBed hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking experiment not submitted to GEO ENCFF741JEM bed narrowPeak peaks ENCSR138SFL ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM2-human ENCAB725ZWB DNA False 2017-11-13 ENCODE 1 ENCFF581ZJL, ENCFF613ITI 6082606 ENCODE Processing Pipeline e9cf509e0928ce9255a8ef9dbf14ea80 https://www.encodeproject.org/files/ENCFF741JEM/@@download/ENCFF741JEM.bed.gz hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking experiment not submitted to GEO ENCFF157WMV bigBed narrowPeak peaks ENCSR138SFL ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM2-human ENCAB725ZWB DNA False 2017-11-13 ENCODE 3 ENCFF640CQW 11136148 ENCODE Processing Pipeline ed506e51885138e9e47905786fd8dafc https://www.encodeproject.org/files/ENCFF157WMV/@@download/ENCFF157WMV.bigBed hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking experiment not submitted to GEO ENCFF067LIW bed narrowPeak optimal idr thresholded peaks ENCSR138SFL ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM2-human ENCAB725ZWB DNA False 2017-11-13 ENCODE 1, 3 ENCFF001TDO, ENCFF618BMZ, ENCFF640CQW, ENCFF741JEM 8712 ENCODE Processing Pipeline 3eb34480957ee92672d0d8d3fcf633bc https://www.encodeproject.org/files/ENCFF067LIW/@@download/ENCFF067LIW.bed.gz hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking experiment not submitted to GEO ENCFF252XAX bigWig fold change over control ENCSR138SFL ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM2-human ENCAB725ZWB DNA False 2017-11-13 ENCODE 3 ENCFF051LWI, ENCFF881KLW 1022040463 ENCODE Processing Pipeline 2a210805c239cb11a39510aba1b728e2 https://www.encodeproject.org/files/ENCFF252XAX/@@download/ENCFF252XAX.bigWig hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking experiment not submitted to GEO ENCFF907SAR bigWig fold change over control ENCSR138SFL ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM2-human ENCAB725ZWB DNA False 2017-11-13 ENCODE 1, 3 ENCFF051LWI, ENCFF581ZJL, ENCFF613ITI, ENCFF881KLW 1977172155 ENCODE Processing Pipeline f0837db0f52c621c49bec92108094ccd https://www.encodeproject.org/files/ENCFF907SAR/@@download/ENCFF907SAR.bigWig hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking experiment not submitted to GEO ENCFF964ANH bigBed narrowPeak optimal idr thresholded peaks ENCSR138SFL ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM2-human ENCAB725ZWB DNA False 2017-11-13 ENCODE 1, 3 ENCFF067LIW 75655 ENCODE Processing Pipeline 0a6751afb56d2d3ae8d491aed72c665d https://www.encodeproject.org/files/ENCFF964ANH/@@download/ENCFF964ANH.bigBed hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking experiment not submitted to GEO ENCFF296WUC bigWig signal p-value ENCSR138SFL ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM2-human ENCAB725ZWB DNA False 2017-11-13 ENCODE 1, 3 ENCFF051LWI, ENCFF581ZJL, ENCFF613ITI, ENCFF881KLW 1676517254 ENCODE Processing Pipeline e321ba8d91298970faa08b6b0793e03d https://www.encodeproject.org/files/ENCFF296WUC/@@download/ENCFF296WUC.bigWig hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking experiment not submitted to GEO ENCFF639GZB bigBed narrowPeak conservative idr thresholded peaks ENCSR138SFL ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM2-human ENCAB725ZWB DNA False 2017-11-13 ENCODE 1, 3 ENCFF845VHM 80297 ENCODE Processing Pipeline 5e9275a7f12729c58352f9d29794b153 https://www.encodeproject.org/files/ENCFF639GZB/@@download/ENCFF639GZB.bigBed hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking experiment not submitted to GEO ENCFF640CQW bed narrowPeak peaks ENCSR138SFL ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM2-human ENCAB725ZWB DNA False 2017-11-13 ENCODE 3 ENCFF051LWI, ENCFF881KLW 5656188 ENCODE Processing Pipeline e3fc2d90c98c5c1431fc9b5fd6830d4d https://www.encodeproject.org/files/ENCFF640CQW/@@download/ENCFF640CQW.bed.gz hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking experiment not submitted to GEO ENCFF618BMZ bed narrowPeak peaks ENCSR138SFL ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM2-human ENCAB725ZWB DNA False 2017-11-13 ENCODE 1, 3 ENCFF051LWI, ENCFF581ZJL, ENCFF613ITI, ENCFF881KLW 6933331 ENCODE Processing Pipeline 63dc876bc2caaf2e6eebb33a359d49c7 https://www.encodeproject.org/files/ENCFF618BMZ/@@download/ENCFF618BMZ.bed.gz hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking experiment not submitted to GEO ENCFF845VHM bed narrowPeak conservative idr thresholded peaks ENCSR138SFL ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM2-human ENCAB725ZWB DNA False 2017-11-13 ENCODE 1, 3 ENCFF001TDO, ENCFF618BMZ, ENCFF640CQW, ENCFF741JEM 3759 ENCODE Processing Pipeline 0af8892b50f5c7b3c77bd102498fc0b2 https://www.encodeproject.org/files/ENCFF845VHM/@@download/ENCFF845VHM.bed.gz hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking experiment not submitted to GEO ENCFF000YGY bam alignments ENCSR000EHO ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCA4-human ENCAB000AEO DNA see document see document False 2011-10-29 ENCODE 1 ENCFF000YHK 569619287 Michael Snyder, Stanford 303593e36233e4e5dfb7767b2d3d1b7e https://www.encodeproject.org/files/ENCFF000YGY/@@download/ENCFF000YGY.bam hg19 archived borderline replicate concordance, low read depth, inconsistent target of control experiment biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF000YGZ bam alignments ENCSR000EHO ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCA4-human ENCAB000AEO DNA see document see document False 2011-10-29 ENCODE 2 ENCFF000YHJ 653401514 Michael Snyder, Stanford 59d4f06d76918d172045b04960d1eed6 https://www.encodeproject.org/files/ENCFF000YGZ/@@download/ENCFF000YGZ.bam hg19 archived borderline replicate concordance, low read depth, inconsistent target of control experiment biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF000YHA bigBed narrowPeak peaks ENCSR000EHO ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCA4-human ENCAB000AEO DNA see document see document False 2011-10-29 ENCODE ENCFF001VME 85387 Michael Snyder, Stanford caf4784e3d4616e6f06167813c9e8dbb https://www.encodeproject.org/files/ENCFF000YHA/@@download/ENCFF000YHA.bigBed hg19 archived borderline replicate concordance, low read depth, inconsistent target of control experiment biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF000YHC bigWig signal ENCSR000EHO ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCA4-human ENCAB000AEO DNA see document see document False 2011-10-29 ENCODE 417218123 Michael Snyder, Stanford 958e6298c263fd7bdbc40a51d437230b https://www.encodeproject.org/files/ENCFF000YHC/@@download/ENCFF000YHC.bigWig hg19 archived borderline replicate concordance, low read depth, inconsistent target of control experiment biological replicates with identical biosample, missing derived_from insufficient read length, insufficient read depth ENCFF000YHJ fastq reads ENCSR000EHO ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCA4-human ENCAB000AEO DNA see document see document False 2011-10-29 ENCODE 2 1 28 single-ended 512145606 Michael Snyder, Stanford bb116828ee18c65159397e77d3433e0a https://www.encodeproject.org/files/ENCFF000YHJ/@@download/ENCFF000YHJ.fastq.gz Illumina Genome Analyzer /files/ENCFF000YQC/ released borderline replicate concordance, low read depth, inconsistent target of control experiment biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF000YHK fastq reads ENCSR000EHO ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCA4-human ENCAB000AEO DNA see document see document False 2011-10-29 ENCODE 1 1 28 single-ended 445134984 Michael Snyder, Stanford 00dc0db379eb90a20f44b9494b440acf https://www.encodeproject.org/files/ENCFF000YHK/@@download/ENCFF000YHK.fastq.gz Illumina Genome Analyzer /files/ENCFF000YQB/ released borderline replicate concordance, low read depth, inconsistent target of control experiment biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF001VME bed narrowPeak peaks ENCSR000EHO ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCA4-human ENCAB000AEO DNA see document see document False 2011-10-29 ENCODE 15872 Michael Snyder, Stanford 8b8df75e28cdea9eb62cef888fd2437f https://www.encodeproject.org/files/ENCFF001VME/@@download/ENCFF001VME.bed.gz hg19 archived borderline replicate concordance, low read depth, inconsistent target of control experiment biological replicates with identical biosample, missing derived_from insufficient read length, insufficient read depth ENCFF002CVT bed narrowPeak optimal idr thresholded peaks ENCSR000EHO ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCA4-human ENCAB000AEO DNA see document see document False 2011-10-29 ENCODE 62006 ENCODE Consortium Analysis Working Group f0053fecf831b5f3782432eb66f512e0 https://www.encodeproject.org/files/ENCFF002CVT/@@download/ENCFF002CVT.bed.gz hg19 archived borderline replicate concordance, low read depth, inconsistent target of control experiment biological replicates with identical biosample, missing derived_from insufficient read length, insufficient read depth ENCFF985WLZ bigBed narrowPeak optimal idr thresholded peaks ENCSR000EHO ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCA4-human ENCAB000AEO DNA see document see document False 2011-10-29 ENCODE ENCFF002CVT 240045 ENCODE Consortium 92d615ef475f994612aac895859e4a69 https://www.encodeproject.org/files/ENCFF985WLZ/@@download/ENCFF985WLZ.bigBed hg19 archived borderline replicate concordance, low read depth, inconsistent target of control experiment biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF035WPI bam alignments ENCSR000EHO ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCA4-human ENCAB000AEO DNA see document see document False 2011-10-29 ENCODE 2 28 ENCFF000YHJ, ENCFF643CGH 405891671 ENCODE Processing Pipeline 7ba794f524c200845d41381016b2fc4d https://www.encodeproject.org/files/ENCFF035WPI/@@download/ENCFF035WPI.bam GRCh38 released borderline replicate concordance, low read depth, inconsistent target of control experiment biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF769SAO bam unfiltered alignments ENCSR000EHO ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCA4-human ENCAB000AEO DNA see document see document False 2011-10-29 ENCODE 2 28 ENCFF000YHJ, ENCFF643CGH 656662950 ENCODE Processing Pipeline 2ca2e23c38ca2b6965600d27188529d3 https://www.encodeproject.org/files/ENCFF769SAO/@@download/ENCFF769SAO.bam GRCh38 released borderline replicate concordance, low read depth, inconsistent target of control experiment biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF756ADE bam unfiltered alignments ENCSR000EHO ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCA4-human ENCAB000AEO DNA see document see document False 2011-10-29 ENCODE 1 28 ENCFF000YHK, ENCFF643CGH 572160413 ENCODE Processing Pipeline eae23c431a7e12d42fccb75b393cc710 https://www.encodeproject.org/files/ENCFF756ADE/@@download/ENCFF756ADE.bam GRCh38 released borderline replicate concordance, low read depth, inconsistent target of control experiment biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF670DXN bam alignments ENCSR000EHO ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCA4-human ENCAB000AEO DNA see document see document False 2011-10-29 ENCODE 1 28 ENCFF000YHK, ENCFF643CGH 346660669 ENCODE Processing Pipeline d261b3a7fbd6c18cab7339bdcaf6b32d https://www.encodeproject.org/files/ENCFF670DXN/@@download/ENCFF670DXN.bam GRCh38 released borderline replicate concordance, low read depth, inconsistent target of control experiment biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF083ACA bam unfiltered alignments ENCSR000EHO ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCA4-human ENCAB000AEO DNA see document see document False 2011-10-29 ENCODE 2 28 ENCFF000YHJ, ENCFF807MUK 654829195 ENCODE Processing Pipeline b39c0676ad9dfeaaf5109ec095044e82 https://www.encodeproject.org/files/ENCFF083ACA/@@download/ENCFF083ACA.bam hg19 released borderline replicate concordance, low read depth, inconsistent target of control experiment biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF841SDW bam unfiltered alignments ENCSR000EHO ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCA4-human ENCAB000AEO DNA see document see document False 2011-10-29 ENCODE 1 28 ENCFF000YHK, ENCFF807MUK 570730724 ENCODE Processing Pipeline b65a28e03a2149480f9a88ef9046e274 https://www.encodeproject.org/files/ENCFF841SDW/@@download/ENCFF841SDW.bam hg19 released borderline replicate concordance, low read depth, inconsistent target of control experiment biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF364YIH bam alignments ENCSR000EHO ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCA4-human ENCAB000AEO DNA see document see document False 2011-10-29 ENCODE 1 28 ENCFF000YHK, ENCFF807MUK 347023632 ENCODE Processing Pipeline 1f2db662b6347f553ebc5d68fcc52e3d https://www.encodeproject.org/files/ENCFF364YIH/@@download/ENCFF364YIH.bam hg19 released borderline replicate concordance, low read depth, inconsistent target of control experiment biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF766XHO bam alignments ENCSR000EHO ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCA4-human ENCAB000AEO DNA see document see document False 2011-10-29 ENCODE 2 28 ENCFF000YHJ, ENCFF807MUK 406280920 ENCODE Processing Pipeline 55bde9cd5facac089622bc2e0696b400 https://www.encodeproject.org/files/ENCFF766XHO/@@download/ENCFF766XHO.bam hg19 released borderline replicate concordance, low read depth, inconsistent target of control experiment biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF628QDI bigWig signal p-value ENCSR000EHO ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCA4-human ENCAB000AEO DNA see document see document False 2011-10-29 ENCODE 1 ENCFF670DXN, ENCFF715JBE 222478368 ENCODE Processing Pipeline 34ebc3918b3280ea72ceb3373611e18d https://www.encodeproject.org/files/ENCFF628QDI/@@download/ENCFF628QDI.bigWig GRCh38 released borderline replicate concordance, low read depth, inconsistent target of control experiment biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF791GYY bigWig signal p-value ENCSR000EHO ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCA4-human ENCAB000AEO DNA see document see document False 2011-10-29 ENCODE 1 ENCFF364YIH, ENCFF732TLR 210703756 ENCODE Processing Pipeline 6b96e0ea4a1e794c6f16a87c6db1780d https://www.encodeproject.org/files/ENCFF791GYY/@@download/ENCFF791GYY.bigWig hg19 released borderline replicate concordance, low read depth, inconsistent target of control experiment biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF445GRR bigWig fold change over control ENCSR000EHO ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCA4-human ENCAB000AEO DNA see document see document False 2011-10-29 ENCODE 1 ENCFF670DXN, ENCFF715JBE 169161732 ENCODE Processing Pipeline 781445569f0468ccbb2b208d34565a7c https://www.encodeproject.org/files/ENCFF445GRR/@@download/ENCFF445GRR.bigWig GRCh38 released borderline replicate concordance, low read depth, inconsistent target of control experiment biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF485KTP bigWig fold change over control ENCSR000EHO ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCA4-human ENCAB000AEO DNA see document see document False 2011-10-29 ENCODE 1 ENCFF364YIH, ENCFF732TLR 171272572 ENCODE Processing Pipeline 4c4c26aecad3123131acb3b73e7ffc91 https://www.encodeproject.org/files/ENCFF485KTP/@@download/ENCFF485KTP.bigWig hg19 released borderline replicate concordance, low read depth, inconsistent target of control experiment biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF218EYJ bigWig signal p-value ENCSR000EHO ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCA4-human ENCAB000AEO DNA see document see document False 2011-10-29 ENCODE 2 ENCFF035WPI, ENCFF156NSV 233082862 ENCODE Processing Pipeline 8952cc22a84baeabb78e6b7a8a8382dc https://www.encodeproject.org/files/ENCFF218EYJ/@@download/ENCFF218EYJ.bigWig GRCh38 released borderline replicate concordance, low read depth, inconsistent target of control experiment biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF577SXY bed narrowPeak peaks ENCSR000EHO ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCA4-human ENCAB000AEO DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF364YIH, ENCFF498SAC, ENCFF732TLR, ENCFF766XHO 6436100 ENCODE Processing Pipeline e902f9498a1bc2c5672b83fbadf98830 https://www.encodeproject.org/files/ENCFF577SXY/@@download/ENCFF577SXY.bed.gz hg19 released borderline replicate concordance, low read depth, inconsistent target of control experiment biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF436JXH bed narrowPeak peaks ENCSR000EHO ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCA4-human ENCAB000AEO DNA see document see document False 2011-10-29 ENCODE 2 ENCFF035WPI, ENCFF156NSV 5195067 ENCODE Processing Pipeline 3558ab8d50e9be2f8784b9194103e7bb https://www.encodeproject.org/files/ENCFF436JXH/@@download/ENCFF436JXH.bed.gz GRCh38 released borderline replicate concordance, low read depth, inconsistent target of control experiment biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF835DMD bigBed narrowPeak peaks ENCSR000EHO ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCA4-human ENCAB000AEO DNA see document see document False 2011-10-29 ENCODE 1 ENCFF155OWJ 12620653 ENCODE Processing Pipeline afd9706634f08cc201bb535286f500d3 https://www.encodeproject.org/files/ENCFF835DMD/@@download/ENCFF835DMD.bigBed hg19 released borderline replicate concordance, low read depth, inconsistent target of control experiment biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF718EVD bigWig signal p-value ENCSR000EHO ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCA4-human ENCAB000AEO DNA see document see document False 2011-10-29 ENCODE 2 ENCFF498SAC, ENCFF766XHO 245357528 ENCODE Processing Pipeline 4f3b3e40055e2b696720d3fc8fb2347c https://www.encodeproject.org/files/ENCFF718EVD/@@download/ENCFF718EVD.bigWig hg19 released borderline replicate concordance, low read depth, inconsistent target of control experiment biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF705HNW bigWig signal p-value ENCSR000EHO ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCA4-human ENCAB000AEO DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF035WPI, ENCFF156NSV, ENCFF670DXN, ENCFF715JBE 477468929 ENCODE Processing Pipeline 35cd7db0f17341ea623c34f4de1156db https://www.encodeproject.org/files/ENCFF705HNW/@@download/ENCFF705HNW.bigWig GRCh38 released borderline replicate concordance, low read depth, inconsistent target of control experiment biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF042SLP bigWig fold change over control ENCSR000EHO ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCA4-human ENCAB000AEO DNA see document see document False 2011-10-29 ENCODE 2 ENCFF035WPI, ENCFF156NSV 209870115 ENCODE Processing Pipeline a957d7b7b689c7dad0ca9f171200560f https://www.encodeproject.org/files/ENCFF042SLP/@@download/ENCFF042SLP.bigWig GRCh38 released borderline replicate concordance, low read depth, inconsistent target of control experiment biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF375TQI bed narrowPeak peaks ENCSR000EHO ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCA4-human ENCAB000AEO DNA see document see document False 2011-10-29 ENCODE 1 ENCFF670DXN, ENCFF715JBE 5206203 ENCODE Processing Pipeline afde909afd322afaa6c9da6be240a51f https://www.encodeproject.org/files/ENCFF375TQI/@@download/ENCFF375TQI.bed.gz GRCh38 released borderline replicate concordance, low read depth, inconsistent target of control experiment biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF487BAT bigWig fold change over control ENCSR000EHO ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCA4-human ENCAB000AEO DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF364YIH, ENCFF498SAC, ENCFF732TLR, ENCFF766XHO 419554995 ENCODE Processing Pipeline 3810f0302b1da5eb9ed5bbb8fae7a9cf https://www.encodeproject.org/files/ENCFF487BAT/@@download/ENCFF487BAT.bigWig hg19 released borderline replicate concordance, low read depth, inconsistent target of control experiment biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF327OZA bed narrowPeak peaks ENCSR000EHO ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCA4-human ENCAB000AEO DNA see document see document False 2011-10-29 ENCODE 2 ENCFF498SAC, ENCFF766XHO 5195945 ENCODE Processing Pipeline 02e069ab850d2bc8130c4d989a9a0699 https://www.encodeproject.org/files/ENCFF327OZA/@@download/ENCFF327OZA.bed.gz hg19 released borderline replicate concordance, low read depth, inconsistent target of control experiment biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF002UUR bigBed narrowPeak peaks ENCSR000EHO ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCA4-human ENCAB000AEO DNA see document see document False 2011-10-29 ENCODE 2 ENCFF436JXH 12874177 ENCODE Processing Pipeline 37210de80d3a56c68f5ff2d84ec5f23d https://www.encodeproject.org/files/ENCFF002UUR/@@download/ENCFF002UUR.bigBed GRCh38 released borderline replicate concordance, low read depth, inconsistent target of control experiment biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF038QYZ bed narrowPeak peaks ENCSR000EHO ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCA4-human ENCAB000AEO DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF035WPI, ENCFF156NSV, ENCFF670DXN, ENCFF715JBE 6426235 ENCODE Processing Pipeline 4ad856d5917b5cf0248b6ad86278c93a https://www.encodeproject.org/files/ENCFF038QYZ/@@download/ENCFF038QYZ.bed.gz GRCh38 released borderline replicate concordance, low read depth, inconsistent target of control experiment biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF251WLL bed narrowPeak conservative idr thresholded peaks ENCSR000EHO ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCA4-human ENCAB000AEO DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF001TDO, ENCFF155OWJ, ENCFF327OZA, ENCFF577SXY 47905 ENCODE Processing Pipeline fbd42e5ce6493ddc7132a420db809c1c https://www.encodeproject.org/files/ENCFF251WLL/@@download/ENCFF251WLL.bed.gz hg19 released borderline replicate concordance, low read depth, inconsistent target of control experiment biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF722TXP bigWig signal p-value ENCSR000EHO ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCA4-human ENCAB000AEO DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF364YIH, ENCFF498SAC, ENCFF732TLR, ENCFF766XHO 426496524 ENCODE Processing Pipeline 2f7e760b7e71883be6d4f2c075cddd24 https://www.encodeproject.org/files/ENCFF722TXP/@@download/ENCFF722TXP.bigWig hg19 released borderline replicate concordance, low read depth, inconsistent target of control experiment biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF322QXV bigWig fold change over control ENCSR000EHO ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCA4-human ENCAB000AEO DNA see document see document False 2011-10-29 ENCODE 2 ENCFF498SAC, ENCFF766XHO 210636292 ENCODE Processing Pipeline 5a4b5bac306d6f9c5c6f2959d9049094 https://www.encodeproject.org/files/ENCFF322QXV/@@download/ENCFF322QXV.bigWig hg19 released borderline replicate concordance, low read depth, inconsistent target of control experiment biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF110DDG bigWig fold change over control ENCSR000EHO ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCA4-human ENCAB000AEO DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF035WPI, ENCFF156NSV, ENCFF670DXN, ENCFF715JBE 417375668 ENCODE Processing Pipeline 01880d2396a59ca39b246f1733da52ea https://www.encodeproject.org/files/ENCFF110DDG/@@download/ENCFF110DDG.bigWig GRCh38 released borderline replicate concordance, low read depth, inconsistent target of control experiment biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF155OWJ bed narrowPeak peaks ENCSR000EHO ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCA4-human ENCAB000AEO DNA see document see document False 2011-10-29 ENCODE 1 ENCFF364YIH, ENCFF732TLR 5210342 ENCODE Processing Pipeline dc2afec691eb3571ae809e637ff3341e https://www.encodeproject.org/files/ENCFF155OWJ/@@download/ENCFF155OWJ.bed.gz hg19 released borderline replicate concordance, low read depth, inconsistent target of control experiment biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF044PRO bigBed narrowPeak conservative idr thresholded peaks ENCSR000EHO ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCA4-human ENCAB000AEO DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF251WLL 167050 ENCODE Processing Pipeline 5ecb198c016e00300ff721f33105973d https://www.encodeproject.org/files/ENCFF044PRO/@@download/ENCFF044PRO.bigBed hg19 released borderline replicate concordance, low read depth, inconsistent target of control experiment biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF534QPN bigBed narrowPeak peaks ENCSR000EHO ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCA4-human ENCAB000AEO DNA see document see document False 2011-10-29 ENCODE 2 ENCFF327OZA 12869449 ENCODE Processing Pipeline 9457662d58d2c175f60877766a1f37b2 https://www.encodeproject.org/files/ENCFF534QPN/@@download/ENCFF534QPN.bigBed hg19 released borderline replicate concordance, low read depth, inconsistent target of control experiment biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF371IDM bigBed narrowPeak peaks ENCSR000EHO ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCA4-human ENCAB000AEO DNA see document see document False 2011-10-29 ENCODE 1 ENCFF375TQI 12623854 ENCODE Processing Pipeline c14e728f54b6973dee44f1629a7425c8 https://www.encodeproject.org/files/ENCFF371IDM/@@download/ENCFF371IDM.bigBed GRCh38 released borderline replicate concordance, low read depth, inconsistent target of control experiment biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF319RFJ bigBed narrowPeak peaks ENCSR000EHO ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCA4-human ENCAB000AEO DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF577SXY 13056817 ENCODE Processing Pipeline 999e4c598c4460278539de26059d7303 https://www.encodeproject.org/files/ENCFF319RFJ/@@download/ENCFF319RFJ.bigBed hg19 released borderline replicate concordance, low read depth, inconsistent target of control experiment biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF710LRU bed narrowPeak optimal idr thresholded peaks ENCSR000EHO ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCA4-human ENCAB000AEO DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF001TDO, ENCFF155OWJ, ENCFF327OZA, ENCFF577SXY 75396 ENCODE Processing Pipeline 3d8c82d5a90365fb3f865c67613b24ec https://www.encodeproject.org/files/ENCFF710LRU/@@download/ENCFF710LRU.bed.gz hg19 released borderline replicate concordance, low read depth, inconsistent target of control experiment biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF957BFN bigBed narrowPeak optimal idr thresholded peaks ENCSR000EHO ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCA4-human ENCAB000AEO DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF710LRU 218665 ENCODE Processing Pipeline 4042811f803ffccd603ef4dd83f8fa0c https://www.encodeproject.org/files/ENCFF957BFN/@@download/ENCFF957BFN.bigBed hg19 released borderline replicate concordance, low read depth, inconsistent target of control experiment biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF346NCW bigBed narrowPeak peaks ENCSR000EHO ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCA4-human ENCAB000AEO DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF038QYZ 13062808 ENCODE Processing Pipeline 276685feef96df5f072f4a74c1407898 https://www.encodeproject.org/files/ENCFF346NCW/@@download/ENCFF346NCW.bigBed GRCh38 released borderline replicate concordance, low read depth, inconsistent target of control experiment biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF714WNT bed narrowPeak conservative idr thresholded peaks ENCSR000EHO ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCA4-human ENCAB000AEO DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF038QYZ, ENCFF375TQI, ENCFF419RSJ, ENCFF436JXH 47541 ENCODE Processing Pipeline cdd3b027a8ab48dfd235b30f22d80b5f https://www.encodeproject.org/files/ENCFF714WNT/@@download/ENCFF714WNT.bed.gz GRCh38 released borderline replicate concordance, low read depth, inconsistent target of control experiment biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF253EAE bigBed narrowPeak conservative idr thresholded peaks ENCSR000EHO ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCA4-human ENCAB000AEO DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF714WNT 166698 ENCODE Processing Pipeline 47038887d9d515eb9bc29752a81b7c7d https://www.encodeproject.org/files/ENCFF253EAE/@@download/ENCFF253EAE.bigBed GRCh38 released borderline replicate concordance, low read depth, inconsistent target of control experiment biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF703NAE bed narrowPeak optimal idr thresholded peaks ENCSR000EHO ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCA4-human ENCAB000AEO DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF038QYZ, ENCFF375TQI, ENCFF419RSJ, ENCFF436JXH 71250 ENCODE Processing Pipeline 4cdefb528e2b466dc2060dfac36e2596 https://www.encodeproject.org/files/ENCFF703NAE/@@download/ENCFF703NAE.bed.gz GRCh38 released borderline replicate concordance, low read depth, inconsistent target of control experiment biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF609IDD bigBed narrowPeak optimal idr thresholded peaks ENCSR000EHO ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCA4-human ENCAB000AEO DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF703NAE 211090 ENCODE Processing Pipeline 6b642ab5f012132e3611a312e0ac69c6 https://www.encodeproject.org/files/ENCFF609IDD/@@download/ENCFF609IDD.bigBed GRCh38 released borderline replicate concordance, low read depth, inconsistent target of control experiment biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF001RUK fastq reads ENCSR000FCE ChIP-seq EFO:0002067 K562 cell line Homo sapiens ETV6-human ENCAB000ABD DNA see document see document False 2014-07-07 ENCODE 1 1 50 single-ended 1331817680 Richard Myers, HAIB 32cd07386ea4618d9e4d928f4e59e102 SRA:SRR5331596 https://www.encodeproject.org/files/ENCFF001RUK/@@download/ENCFF001RUK.fastq.gz Illumina HiSeq 2000 /files/ENCFF001RVN/ released low read depth, antibody characterized with exemption ENCFF511TAB bigWig signal p-value ENCSR000FCE ChIP-seq EFO:0002067 K562 cell line Homo sapiens ETV6-human ENCAB000ABD DNA see document see document False 2014-07-07 ENCODE 1 ENCFF061QOJ, ENCFF468ZDX, ENCFF636GYT 1045269060 ENCODE Processing Pipeline c987a2fb68a4dad2fdc1dd48d3790006 https://www.encodeproject.org/files/ENCFF511TAB/@@download/ENCFF511TAB.bigWig hg19 released low read depth, antibody characterized with exemption ENCFF049GGD bigWig fold change over control ENCSR000FCE ChIP-seq EFO:0002067 K562 cell line Homo sapiens ETV6-human ENCAB000ABD DNA see document see document False 2014-07-07 ENCODE 1 ENCFF061QOJ, ENCFF468ZDX, ENCFF636GYT 776022821 ENCODE Processing Pipeline 08c55de4614744e96cdfa59cedb0b9b1 https://www.encodeproject.org/files/ENCFF049GGD/@@download/ENCFF049GGD.bigWig hg19 released low read depth, antibody characterized with exemption ENCFF696VXH fastq reads ENCSR000FCE ChIP-seq EFO:0002067 K562 cell line Homo sapiens ETV6-human ENCAB000ABD DNA see document see document False 2014-07-07 ENCODE 2 1 50 single-ended 1396047848 Richard Myers, HAIB 1d54dcc020f39b3d77625553e176b8c4 SRA:SRR5331597 https://www.encodeproject.org/files/ENCFF696VXH/@@download/ENCFF696VXH.fastq.gz Illumina HiSeq 2000 /files/ENCFF001RVO/ released low read depth, antibody characterized with exemption ENCFF515KNP bam unfiltered alignments ENCSR000FCE ChIP-seq EFO:0002067 K562 cell line Homo sapiens ETV6-human ENCAB000ABD DNA see document see document False 2014-07-07 ENCODE 1 50 ENCFF001RUK, ENCFF643CGH 1419700983 ENCODE Processing Pipeline 9afadaeb08b0391a0743b2b6cc592096 https://www.encodeproject.org/files/ENCFF515KNP/@@download/ENCFF515KNP.bam GRCh38 released low read depth, antibody characterized with exemption ENCFF002FHN bam alignments ENCSR000FCE ChIP-seq EFO:0002067 K562 cell line Homo sapiens ETV6-human ENCAB000ABD DNA see document see document False 2014-07-07 ENCODE 1 50 ENCFF001RUK, ENCFF643CGH 1034444747 ENCODE Processing Pipeline 20cfda0b36f9878a3868fedf9874765f https://www.encodeproject.org/files/ENCFF002FHN/@@download/ENCFF002FHN.bam GRCh38 released low read depth, antibody characterized with exemption ENCFF918SIT bigWig signal p-value ENCSR000FCE ChIP-seq EFO:0002067 K562 cell line Homo sapiens ETV6-human ENCAB000ABD DNA see document see document False 2014-07-07 ENCODE 1 ENCFF002FHN, ENCFF204GLJ, ENCFF332SVJ 925460065 ENCODE Processing Pipeline f762e5f6106115dc78bc8910418eb056 https://www.encodeproject.org/files/ENCFF918SIT/@@download/ENCFF918SIT.bigWig GRCh38 released low read depth, antibody characterized with exemption ENCFF277UWP bigWig signal p-value ENCSR000FCE ChIP-seq EFO:0002067 K562 cell line Homo sapiens ETV6-human ENCAB000ABD DNA see document see document False 2014-07-07 ENCODE 2 ENCFF204GLJ, ENCFF332SVJ, ENCFF836NST 1133953291 ENCODE Processing Pipeline fd9cbf2a17dcaeb2cf369b9af4cb17c5 https://www.encodeproject.org/files/ENCFF277UWP/@@download/ENCFF277UWP.bigWig GRCh38 released low read depth, antibody characterized with exemption ENCFF583JWT bigWig fold change over control ENCSR000FCE ChIP-seq EFO:0002067 K562 cell line Homo sapiens ETV6-human ENCAB000ABD DNA see document see document False 2014-07-07 ENCODE 1 ENCFF002FHN, ENCFF204GLJ, ENCFF332SVJ 760598263 ENCODE Processing Pipeline 76cbcc958190332fd61b70c1ff8f3196 https://www.encodeproject.org/files/ENCFF583JWT/@@download/ENCFF583JWT.bigWig GRCh38 released low read depth, antibody characterized with exemption ENCFF324FAQ bigWig signal p-value ENCSR000FCE ChIP-seq EFO:0002067 K562 cell line Homo sapiens ETV6-human ENCAB000ABD DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF002FHN, ENCFF204GLJ, ENCFF332SVJ, ENCFF836NST 1169759986 ENCODE Processing Pipeline 824f5c8726c06dfcf13b4282c6301975 https://www.encodeproject.org/files/ENCFF324FAQ/@@download/ENCFF324FAQ.bigWig GRCh38 released low read depth, antibody characterized with exemption ENCFF699AFZ bigWig fold change over control ENCSR000FCE ChIP-seq EFO:0002067 K562 cell line Homo sapiens ETV6-human ENCAB000ABD DNA see document see document False 2014-07-07 ENCODE 2 ENCFF204GLJ, ENCFF332SVJ, ENCFF836NST 712355051 ENCODE Processing Pipeline 9eb9c0fd734dea3f271b875c6582fd13 https://www.encodeproject.org/files/ENCFF699AFZ/@@download/ENCFF699AFZ.bigWig GRCh38 released low read depth, antibody characterized with exemption ENCFF328UEJ bigWig fold change over control ENCSR000FCE ChIP-seq EFO:0002067 K562 cell line Homo sapiens ETV6-human ENCAB000ABD DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF002FHN, ENCFF204GLJ, ENCFF332SVJ, ENCFF836NST 1158267341 ENCODE Processing Pipeline 6f89c61f2a28807f751c3e4e3c3f03a5 https://www.encodeproject.org/files/ENCFF328UEJ/@@download/ENCFF328UEJ.bigWig GRCh38 released low read depth, antibody characterized with exemption ENCFF355XHR bam unfiltered alignments ENCSR000FCE ChIP-seq EFO:0002067 K562 cell line Homo sapiens ETV6-human ENCAB000ABD DNA see document see document False 2014-07-07 ENCODE 1 50 ENCFF001RUK, ENCFF807MUK 1416929475 ENCODE Processing Pipeline b540bab6bfe08a31b1f414f3bf98d8e7 https://www.encodeproject.org/files/ENCFF355XHR/@@download/ENCFF355XHR.bam hg19 released low read depth, antibody characterized with exemption ENCFF636GYT bam alignments ENCSR000FCE ChIP-seq EFO:0002067 K562 cell line Homo sapiens ETV6-human ENCAB000ABD DNA see document see document False 2014-07-07 ENCODE 1 50 ENCFF001RUK, ENCFF807MUK 1034920838 ENCODE Processing Pipeline 7e781bae7e942fc0379038f78f4f5373 https://www.encodeproject.org/files/ENCFF636GYT/@@download/ENCFF636GYT.bam hg19 released low read depth, antibody characterized with exemption ENCFF791ACK bigBed narrowPeak peaks ENCSR000FCE ChIP-seq EFO:0002067 K562 cell line Homo sapiens ETV6-human ENCAB000ABD DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF770XGT 13369873 ENCODE Processing Pipeline e698d0ccb4f9c04165cff812b3fedb18 https://www.encodeproject.org/files/ENCFF791ACK/@@download/ENCFF791ACK.bigBed GRCh38 released low read depth, antibody characterized with exemption ENCFF449ZKG bed narrowPeak peaks ENCSR000FCE ChIP-seq EFO:0002067 K562 cell line Homo sapiens ETV6-human ENCAB000ABD DNA see document see document False 2014-07-07 ENCODE 2 ENCFF204GLJ, ENCFF332SVJ, ENCFF836NST 6242857 ENCODE Processing Pipeline f57d50dd25547d438eb2fc58621272f0 https://www.encodeproject.org/files/ENCFF449ZKG/@@download/ENCFF449ZKG.bed.gz GRCh38 released low read depth, antibody characterized with exemption ENCFF770XGT bed narrowPeak peaks ENCSR000FCE ChIP-seq EFO:0002067 K562 cell line Homo sapiens ETV6-human ENCAB000ABD DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF002FHN, ENCFF204GLJ, ENCFF332SVJ, ENCFF836NST 6705971 ENCODE Processing Pipeline a77523a29d6805fc32c4923362d93d67 https://www.encodeproject.org/files/ENCFF770XGT/@@download/ENCFF770XGT.bed.gz GRCh38 released low read depth, antibody characterized with exemption ENCFF888BUW bed narrowPeak peaks ENCSR000FCE ChIP-seq EFO:0002067 K562 cell line Homo sapiens ETV6-human ENCAB000ABD DNA see document see document False 2014-07-07 ENCODE 1 ENCFF002FHN, ENCFF204GLJ, ENCFF332SVJ 5969385 ENCODE Processing Pipeline 29ddfe6d51e93a5c50b47a4a97fd5512 https://www.encodeproject.org/files/ENCFF888BUW/@@download/ENCFF888BUW.bed.gz GRCh38 released low read depth, antibody characterized with exemption ENCFF003DZL bigBed narrowPeak peaks ENCSR000FCE ChIP-seq EFO:0002067 K562 cell line Homo sapiens ETV6-human ENCAB000ABD DNA see document see document False 2014-07-07 ENCODE 1 ENCFF888BUW 13326393 ENCODE Processing Pipeline a5a0b2319f054b3cc95e53f2f2f431d7 https://www.encodeproject.org/files/ENCFF003DZL/@@download/ENCFF003DZL.bigBed GRCh38 released low read depth, antibody characterized with exemption ENCFF524FAN bigBed narrowPeak peaks ENCSR000FCE ChIP-seq EFO:0002067 K562 cell line Homo sapiens ETV6-human ENCAB000ABD DNA see document see document False 2014-07-07 ENCODE 2 ENCFF449ZKG 13384804 ENCODE Processing Pipeline 83b1b961bed2fa71dc702f671054929b https://www.encodeproject.org/files/ENCFF524FAN/@@download/ENCFF524FAN.bigBed GRCh38 released low read depth, antibody characterized with exemption ENCFF452INW bed narrowPeak conservative idr thresholded peaks ENCSR000FCE ChIP-seq EFO:0002067 K562 cell line Homo sapiens ETV6-human ENCAB000ABD DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF419RSJ, ENCFF449ZKG, ENCFF770XGT, ENCFF888BUW 87475 ENCODE Processing Pipeline 452e76c6b1cde91d31a6cea314121946 https://www.encodeproject.org/files/ENCFF452INW/@@download/ENCFF452INW.bed.gz GRCh38 released low read depth, antibody characterized with exemption ENCFF426GSY bed narrowPeak optimal idr thresholded peaks ENCSR000FCE ChIP-seq EFO:0002067 K562 cell line Homo sapiens ETV6-human ENCAB000ABD DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF419RSJ, ENCFF449ZKG, ENCFF770XGT, ENCFF888BUW 123462 ENCODE Processing Pipeline f372203cf93a8bdcd16c8592f8bfcf8d https://www.encodeproject.org/files/ENCFF426GSY/@@download/ENCFF426GSY.bed.gz GRCh38 released low read depth, antibody characterized with exemption ENCFF846SVG bigBed narrowPeak optimal idr thresholded peaks ENCSR000FCE ChIP-seq EFO:0002067 K562 cell line Homo sapiens ETV6-human ENCAB000ABD DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF426GSY 278512 ENCODE Processing Pipeline 8d5ba2913fcc67fadf89a162348b978f https://www.encodeproject.org/files/ENCFF846SVG/@@download/ENCFF846SVG.bigBed GRCh38 released low read depth, antibody characterized with exemption ENCFF069TOP bigBed narrowPeak conservative idr thresholded peaks ENCSR000FCE ChIP-seq EFO:0002067 K562 cell line Homo sapiens ETV6-human ENCAB000ABD DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF452INW 224076 ENCODE Processing Pipeline 6007617e3cbe4127c6baa3b8d19e2a2c https://www.encodeproject.org/files/ENCFF069TOP/@@download/ENCFF069TOP.bigBed GRCh38 released low read depth, antibody characterized with exemption ENCFF905HXC bam unfiltered alignments ENCSR000FCE ChIP-seq EFO:0002067 K562 cell line Homo sapiens ETV6-human ENCAB000ABD DNA see document see document False 2014-07-07 ENCODE 2 50 ENCFF643CGH, ENCFF696VXH 1497814819 ENCODE Processing Pipeline 33fc961f7c3e416e0988b328fe19c2be https://www.encodeproject.org/files/ENCFF905HXC/@@download/ENCFF905HXC.bam GRCh38 released low read depth, antibody characterized with exemption ENCFF836NST bam alignments ENCSR000FCE ChIP-seq EFO:0002067 K562 cell line Homo sapiens ETV6-human ENCAB000ABD DNA see document see document False 2014-07-07 ENCODE 2 50 ENCFF643CGH, ENCFF696VXH 1074173245 ENCODE Processing Pipeline c0eeef98b50ccbaf469ee7612fc1bcc0 https://www.encodeproject.org/files/ENCFF836NST/@@download/ENCFF836NST.bam GRCh38 released low read depth, antibody characterized with exemption ENCFF307VES bam unfiltered alignments ENCSR000FCE ChIP-seq EFO:0002067 K562 cell line Homo sapiens ETV6-human ENCAB000ABD DNA see document see document False 2014-07-07 ENCODE 2 50 ENCFF696VXH, ENCFF807MUK 1494337679 ENCODE Processing Pipeline 694212b3fb9ea94d22ac517e25bc4df7 https://www.encodeproject.org/files/ENCFF307VES/@@download/ENCFF307VES.bam hg19 released low read depth, antibody characterized with exemption ENCFF970YTT bam alignments ENCSR000FCE ChIP-seq EFO:0002067 K562 cell line Homo sapiens ETV6-human ENCAB000ABD DNA see document see document False 2014-07-07 ENCODE 2 50 ENCFF696VXH, ENCFF807MUK 1074861134 ENCODE Processing Pipeline 5ec7a3e024110ee86259720e498b3d12 https://www.encodeproject.org/files/ENCFF970YTT/@@download/ENCFF970YTT.bam hg19 released low read depth, antibody characterized with exemption ENCFF956QNK bigWig signal p-value ENCSR000FCE ChIP-seq EFO:0002067 K562 cell line Homo sapiens ETV6-human ENCAB000ABD DNA see document see document False 2014-07-07 ENCODE 2 ENCFF061QOJ, ENCFF468ZDX, ENCFF970YTT 1169317167 ENCODE Processing Pipeline 424b9f46260dca24101d7f6080b407ef https://www.encodeproject.org/files/ENCFF956QNK/@@download/ENCFF956QNK.bigWig hg19 released low read depth, antibody characterized with exemption ENCFF331DKM bigWig signal p-value ENCSR000FCE ChIP-seq EFO:0002067 K562 cell line Homo sapiens ETV6-human ENCAB000ABD DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF061QOJ, ENCFF468ZDX, ENCFF636GYT, ENCFF970YTT 1103172585 ENCODE Processing Pipeline 17bb19b0be12b83aefc192456bc332e2 https://www.encodeproject.org/files/ENCFF331DKM/@@download/ENCFF331DKM.bigWig hg19 released low read depth, antibody characterized with exemption ENCFF639XEG bigWig fold change over control ENCSR000FCE ChIP-seq EFO:0002067 K562 cell line Homo sapiens ETV6-human ENCAB000ABD DNA see document see document False 2014-07-07 ENCODE 2 ENCFF061QOJ, ENCFF468ZDX, ENCFF970YTT 711605941 ENCODE Processing Pipeline 9522a76905999a619465798c855d3173 https://www.encodeproject.org/files/ENCFF639XEG/@@download/ENCFF639XEG.bigWig hg19 released low read depth, antibody characterized with exemption ENCFF884NXM bigWig fold change over control ENCSR000FCE ChIP-seq EFO:0002067 K562 cell line Homo sapiens ETV6-human ENCAB000ABD DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF061QOJ, ENCFF468ZDX, ENCFF636GYT, ENCFF970YTT 1180282094 ENCODE Processing Pipeline 707fc3396824db3f692cb20ab510f51e https://www.encodeproject.org/files/ENCFF884NXM/@@download/ENCFF884NXM.bigWig hg19 released low read depth, antibody characterized with exemption ENCFF235BMG bed narrowPeak peaks ENCSR000FCE ChIP-seq EFO:0002067 K562 cell line Homo sapiens ETV6-human ENCAB000ABD DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF061QOJ, ENCFF468ZDX, ENCFF636GYT, ENCFF970YTT 6694225 ENCODE Processing Pipeline 8fbe67c8e544b0c77491a647e48ab12c https://www.encodeproject.org/files/ENCFF235BMG/@@download/ENCFF235BMG.bed.gz hg19 released low read depth, antibody characterized with exemption ENCFF058UQC bigBed narrowPeak optimal idr thresholded peaks ENCSR000FCE ChIP-seq EFO:0002067 K562 cell line Homo sapiens ETV6-human ENCAB000ABD DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF545VNY 275487 ENCODE Processing Pipeline b40e4b834dae013333ef15e1c0adf333 https://www.encodeproject.org/files/ENCFF058UQC/@@download/ENCFF058UQC.bigBed hg19 released low read depth, antibody characterized with exemption ENCFF539MNA bed narrowPeak peaks ENCSR000FCE ChIP-seq EFO:0002067 K562 cell line Homo sapiens ETV6-human ENCAB000ABD DNA see document see document False 2014-07-07 ENCODE 1 ENCFF061QOJ, ENCFF468ZDX, ENCFF636GYT 6192680 ENCODE Processing Pipeline 929042b07cf8f9c996d1039cf9d60363 https://www.encodeproject.org/files/ENCFF539MNA/@@download/ENCFF539MNA.bed.gz hg19 released low read depth, antibody characterized with exemption ENCFF095DJV bed narrowPeak conservative idr thresholded peaks ENCSR000FCE ChIP-seq EFO:0002067 K562 cell line Homo sapiens ETV6-human ENCAB000ABD DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF001TDO, ENCFF235BMG, ENCFF539MNA, ENCFF915TWO 86751 ENCODE Processing Pipeline f5abbd0ace1017af73f7970bd0533b9c https://www.encodeproject.org/files/ENCFF095DJV/@@download/ENCFF095DJV.bed.gz hg19 released low read depth, antibody characterized with exemption ENCFF550PLL bigBed narrowPeak conservative idr thresholded peaks ENCSR000FCE ChIP-seq EFO:0002067 K562 cell line Homo sapiens ETV6-human ENCAB000ABD DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF095DJV 222611 ENCODE Processing Pipeline e5ae3c5bd58a04e4f4b2a6f12d1fe211 https://www.encodeproject.org/files/ENCFF550PLL/@@download/ENCFF550PLL.bigBed hg19 released low read depth, antibody characterized with exemption ENCFF545VNY bed narrowPeak optimal idr thresholded peaks ENCSR000FCE ChIP-seq EFO:0002067 K562 cell line Homo sapiens ETV6-human ENCAB000ABD DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF001TDO, ENCFF235BMG, ENCFF539MNA, ENCFF915TWO 122108 ENCODE Processing Pipeline a29ad50d06ead7823ea05e7b4a848633 https://www.encodeproject.org/files/ENCFF545VNY/@@download/ENCFF545VNY.bed.gz hg19 released low read depth, antibody characterized with exemption ENCFF158MPA bigBed narrowPeak peaks ENCSR000FCE ChIP-seq EFO:0002067 K562 cell line Homo sapiens ETV6-human ENCAB000ABD DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF235BMG 13355647 ENCODE Processing Pipeline 5df3289489e7aee80f1b5e5f40acc7b7 https://www.encodeproject.org/files/ENCFF158MPA/@@download/ENCFF158MPA.bigBed hg19 released low read depth, antibody characterized with exemption ENCFF915TWO bed narrowPeak peaks ENCSR000FCE ChIP-seq EFO:0002067 K562 cell line Homo sapiens ETV6-human ENCAB000ABD DNA see document see document False 2014-07-07 ENCODE 2 ENCFF061QOJ, ENCFF468ZDX, ENCFF970YTT 6245568 ENCODE Processing Pipeline be53c15e63e17b68db330f759e7bf3e4 https://www.encodeproject.org/files/ENCFF915TWO/@@download/ENCFF915TWO.bed.gz hg19 released low read depth, antibody characterized with exemption ENCFF492SKI bigBed narrowPeak peaks ENCSR000FCE ChIP-seq EFO:0002067 K562 cell line Homo sapiens ETV6-human ENCAB000ABD DNA see document see document False 2014-07-07 ENCODE 1 ENCFF539MNA 13336446 ENCODE Processing Pipeline fead6907f3c5c3ffe42f1e299603da9c https://www.encodeproject.org/files/ENCFF492SKI/@@download/ENCFF492SKI.bigBed hg19 released low read depth, antibody characterized with exemption ENCFF662EWP bigBed narrowPeak peaks ENCSR000FCE ChIP-seq EFO:0002067 K562 cell line Homo sapiens ETV6-human ENCAB000ABD DNA see document see document False 2014-07-07 ENCODE 2 ENCFF915TWO 13376467 ENCODE Processing Pipeline e9d1cd375a4d39b91fcc8f7371c0e478 https://www.encodeproject.org/files/ENCFF662EWP/@@download/ENCFF662EWP.bigBed hg19 released low read depth, antibody characterized with exemption ENCFF000YKN bigBed narrowPeak peaks ENCSR000EGJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MYC-human ENCAB000AET DNA see document see document False 2012-05-14 ENCODE ENCFF001VMU 2856964 Michael Snyder, Stanford 5b9d66b604496dd792b95245194b8b46 https://www.encodeproject.org/files/ENCFF000YKN/@@download/ENCFF000YKN.bigBed hg19 archived low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF000YKO fastq reads ENCSR000EGJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MYC-human ENCAB000AET DNA see document see document False 2012-05-14 ENCODE 1 1 36 single-ended 869032274 Michael Snyder, Stanford 82acb8294f42119da2f1923be6445652 https://www.encodeproject.org/files/ENCFF000YKO/@@download/ENCFF000YKO.fastq.gz Illumina Genome Analyzer /files/ENCFF000YRB/ released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF000YKQ bam alignments ENCSR000EGJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MYC-human ENCAB000AET DNA see document see document False 2012-05-14 ENCODE 1 1 409506272 Michael Snyder, Stanford 1f446810fb1f810711e40ff638b21656 https://www.encodeproject.org/files/ENCFF000YKQ/@@download/ENCFF000YKQ.bam hg19 archived low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample, missing derived_from ENCFF000YKR fastq reads ENCSR000EGJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MYC-human ENCAB000AET DNA see document see document False 2012-05-14 ENCODE 2 1 36 single-ended 1035790335 Michael Snyder, Stanford 25c359856f75f699e95f321667f0ed5c https://www.encodeproject.org/files/ENCFF000YKR/@@download/ENCFF000YKR.fastq.gz Illumina Genome Analyzer /files/ENCFF000YRB/ released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF000YKT bigWig signal ENCSR000EGJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MYC-human ENCAB000AET DNA see document see document False 2012-05-14 ENCODE 363888883 Michael Snyder, Stanford 8433bd0c23096f106fee6df61bc269a8 https://www.encodeproject.org/files/ENCFF000YKT/@@download/ENCFF000YKT.bigWig hg19 archived low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample, missing derived_from ENCFF000YKU bam alignments ENCSR000EGJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MYC-human ENCAB000AET DNA see document see document False 2012-05-14 ENCODE 2 1 554252374 Michael Snyder, Stanford db8c677f486d69100e01f5fdf53d34ea https://www.encodeproject.org/files/ENCFF000YKU/@@download/ENCFF000YKU.bam hg19 archived low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample, missing derived_from ENCFF001VMU bed narrowPeak peaks ENCSR000EGJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MYC-human ENCAB000AET DNA see document see document False 2012-05-14 ENCODE 1199066 Michael Snyder, Stanford 41b1b33137420093e34f6c6f25dd363a https://www.encodeproject.org/files/ENCFF001VMU/@@download/ENCFF001VMU.bed.gz hg19 archived low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample, missing derived_from ENCFF002CWH bed narrowPeak optimal idr thresholded peaks ENCSR000EGJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MYC-human ENCAB000AET DNA see document see document False 2012-05-14 ENCODE 521895 ENCODE Consortium Analysis Working Group 2afcc7647009b98a31ef5cc965732f63 https://www.encodeproject.org/files/ENCFF002CWH/@@download/ENCFF002CWH.bed.gz hg19 archived low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample, missing derived_from ENCFF684NFF bigBed narrowPeak optimal idr thresholded peaks ENCSR000EGJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MYC-human ENCAB000AET DNA see document see document False 2012-05-14 ENCODE ENCFF002CWH 1206588 ENCODE Consortium a5f0af2a558200917a7a9382426af02f https://www.encodeproject.org/files/ENCFF684NFF/@@download/ENCFF684NFF.bigBed hg19 archived low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF641HZR bam alignments ENCSR000EGJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MYC-human ENCAB000AET DNA see document see document False 2012-05-14 ENCODE 1 36 ENCFF000YKO, ENCFF643CGH 626076397 ENCODE Processing Pipeline d9b3ffcd70e742b3c87ee24bbde32c4f https://www.encodeproject.org/files/ENCFF641HZR/@@download/ENCFF641HZR.bam GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF191PXA bam unfiltered alignments ENCSR000EGJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MYC-human ENCAB000AET DNA see document see document False 2012-05-14 ENCODE 1 36 ENCFF000YKO, ENCFF643CGH 961917050 ENCODE Processing Pipeline dae88501b48dbcb748304a9f45777fd5 https://www.encodeproject.org/files/ENCFF191PXA/@@download/ENCFF191PXA.bam GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF006GQZ bam alignments ENCSR000EGJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MYC-human ENCAB000AET DNA see document see document False 2012-05-14 ENCODE 2 36 ENCFF000YKR, ENCFF643CGH 782225387 ENCODE Processing Pipeline 3350a1e872ed7cd1b5c45b8f4a080148 https://www.encodeproject.org/files/ENCFF006GQZ/@@download/ENCFF006GQZ.bam GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF936GCU bam unfiltered alignments ENCSR000EGJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MYC-human ENCAB000AET DNA see document see document False 2012-05-14 ENCODE 2 36 ENCFF000YKR, ENCFF643CGH 1167217239 ENCODE Processing Pipeline 02b5ce189604ac965faf6aa5ba4d5983 https://www.encodeproject.org/files/ENCFF936GCU/@@download/ENCFF936GCU.bam GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF895BNY bam unfiltered alignments ENCSR000EGJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MYC-human ENCAB000AET DNA see document see document False 2012-05-14 ENCODE 1 36 ENCFF000YKO, ENCFF807MUK 958896911 ENCODE Processing Pipeline 3fd5b41255926cf148e30472a74a414b https://www.encodeproject.org/files/ENCFF895BNY/@@download/ENCFF895BNY.bam hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF713RWU bam unfiltered alignments ENCSR000EGJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MYC-human ENCAB000AET DNA see document see document False 2012-05-14 ENCODE 2 36 ENCFF000YKR, ENCFF807MUK 1162796529 ENCODE Processing Pipeline 82e59e489e961e8659692a82494acf8e https://www.encodeproject.org/files/ENCFF713RWU/@@download/ENCFF713RWU.bam hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF058VAU bam alignments ENCSR000EGJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MYC-human ENCAB000AET DNA see document see document False 2012-05-14 ENCODE 1 36 ENCFF000YKO, ENCFF807MUK 626699491 ENCODE Processing Pipeline f99c1bf8ab548f793ff2651717ebba39 https://www.encodeproject.org/files/ENCFF058VAU/@@download/ENCFF058VAU.bam hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF384WMI bam alignments ENCSR000EGJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MYC-human ENCAB000AET DNA see document see document False 2012-05-14 ENCODE 2 36 ENCFF000YKR, ENCFF807MUK 782947503 ENCODE Processing Pipeline f8e026b76c135ba53bc351c601c79b0c https://www.encodeproject.org/files/ENCFF384WMI/@@download/ENCFF384WMI.bam hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF763KSC bigWig signal p-value ENCSR000EGJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MYC-human ENCAB000AET DNA see document see document False 2012-05-14 ENCODE 1 ENCFF023NGN, ENCFF641HZR 408771994 ENCODE Processing Pipeline 4fce9a1123163194ebdd968005bca470 https://www.encodeproject.org/files/ENCFF763KSC/@@download/ENCFF763KSC.bigWig GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF716DGJ bigWig signal p-value ENCSR000EGJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MYC-human ENCAB000AET DNA see document see document False 2012-05-14 ENCODE 2 ENCFF006GQZ, ENCFF023NGN 471924628 ENCODE Processing Pipeline 60bb476458e3f9cad7c5afb687343212 https://www.encodeproject.org/files/ENCFF716DGJ/@@download/ENCFF716DGJ.bigWig GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF550XCM bigWig signal p-value ENCSR000EGJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MYC-human ENCAB000AET DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF006GQZ, ENCFF023NGN, ENCFF641HZR 583389498 ENCODE Processing Pipeline ec243d188c9237985773216aeaf82600 https://www.encodeproject.org/files/ENCFF550XCM/@@download/ENCFF550XCM.bigWig GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF441EVB bigWig fold change over control ENCSR000EGJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MYC-human ENCAB000AET DNA see document see document False 2012-05-14 ENCODE 1 ENCFF023NGN, ENCFF641HZR 321123770 ENCODE Processing Pipeline dd17e690e1025f76e01d9e0b92af2c87 https://www.encodeproject.org/files/ENCFF441EVB/@@download/ENCFF441EVB.bigWig GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF115AXB bigWig fold change over control ENCSR000EGJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MYC-human ENCAB000AET DNA see document see document False 2012-05-14 ENCODE 2 ENCFF006GQZ, ENCFF023NGN 397857739 ENCODE Processing Pipeline 75c1f0b47100fb71db4a704f0f46d298 https://www.encodeproject.org/files/ENCFF115AXB/@@download/ENCFF115AXB.bigWig GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF677COF bigWig fold change over control ENCSR000EGJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MYC-human ENCAB000AET DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF006GQZ, ENCFF023NGN, ENCFF641HZR 616118999 ENCODE Processing Pipeline 1b7212bfaae6202ed10c6e32be7b971c https://www.encodeproject.org/files/ENCFF677COF/@@download/ENCFF677COF.bigWig GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF004CLN bed narrowPeak peaks ENCSR000EGJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MYC-human ENCAB000AET DNA see document see document False 2012-05-14 ENCODE 1 ENCFF023NGN, ENCFF641HZR 5554111 ENCODE Processing Pipeline 665761ec4367656e32586b2c6d7c1713 https://www.encodeproject.org/files/ENCFF004CLN/@@download/ENCFF004CLN.bed.gz GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF295SMV bigBed narrowPeak peaks ENCSR000EGJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MYC-human ENCAB000AET DNA see document see document False 2012-05-14 ENCODE 1 ENCFF004CLN 13030276 ENCODE Processing Pipeline c6b9dc2cb975433c918ed5c1bb78b642 https://www.encodeproject.org/files/ENCFF295SMV/@@download/ENCFF295SMV.bigBed GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF836QWS bed narrowPeak peaks ENCSR000EGJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MYC-human ENCAB000AET DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF006GQZ, ENCFF023NGN, ENCFF641HZR 6255792 ENCODE Processing Pipeline 0cf01b14e16bfe90fe5d4914f798e8bf https://www.encodeproject.org/files/ENCFF836QWS/@@download/ENCFF836QWS.bed.gz GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF330UQJ bed narrowPeak peaks ENCSR000EGJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MYC-human ENCAB000AET DNA see document see document False 2012-05-14 ENCODE 2 ENCFF006GQZ, ENCFF023NGN 5530719 ENCODE Processing Pipeline 41bde4653f2806c740b0840f02a38a2a https://www.encodeproject.org/files/ENCFF330UQJ/@@download/ENCFF330UQJ.bed.gz GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF160USS bigBed narrowPeak peaks ENCSR000EGJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MYC-human ENCAB000AET DNA see document see document False 2012-05-14 ENCODE 2 ENCFF330UQJ 13143679 ENCODE Processing Pipeline 23197ed7d0b5c737effaaa5702a5ecbb https://www.encodeproject.org/files/ENCFF160USS/@@download/ENCFF160USS.bigBed GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF566BFG bigBed narrowPeak peaks ENCSR000EGJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MYC-human ENCAB000AET DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF836QWS 13188140 ENCODE Processing Pipeline 69a2c632d344c044f305a52c9a0c558f https://www.encodeproject.org/files/ENCFF566BFG/@@download/ENCFF566BFG.bigBed GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF272ZBE bigBed narrowPeak conservative idr thresholded peaks ENCSR000EGJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MYC-human ENCAB000AET DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF196VRG 1021530 ENCODE Processing Pipeline 47a39745b3b1b188b66a3b3e1afe389a https://www.encodeproject.org/files/ENCFF272ZBE/@@download/ENCFF272ZBE.bigBed GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF196VRG bed narrowPeak conservative idr thresholded peaks ENCSR000EGJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MYC-human ENCAB000AET DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF004CLN, ENCFF330UQJ, ENCFF419RSJ, ENCFF836QWS 515296 ENCODE Processing Pipeline 9affd13d5e0cf7e47ddf6b1d0d6a80f9 https://www.encodeproject.org/files/ENCFF196VRG/@@download/ENCFF196VRG.bed.gz GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF492XUU bed narrowPeak optimal idr thresholded peaks ENCSR000EGJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MYC-human ENCAB000AET DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF004CLN, ENCFF330UQJ, ENCFF419RSJ, ENCFF836QWS 530950 ENCODE Processing Pipeline de1e6fbb2410c41327714236770bd01e https://www.encodeproject.org/files/ENCFF492XUU/@@download/ENCFF492XUU.bed.gz GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF345ZAR bigBed narrowPeak optimal idr thresholded peaks ENCSR000EGJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MYC-human ENCAB000AET DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF492XUU 1046403 ENCODE Processing Pipeline 85bd7aab1869b2340a1af8664e87bc3d https://www.encodeproject.org/files/ENCFF345ZAR/@@download/ENCFF345ZAR.bigBed GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF262PSO bigWig fold change over control ENCSR000EGJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MYC-human ENCAB000AET DNA see document see document False 2012-05-14 ENCODE 1 ENCFF058VAU, ENCFF710NTS 320716877 ENCODE Processing Pipeline 595105284e5b8203f16191e24d5f0081 https://www.encodeproject.org/files/ENCFF262PSO/@@download/ENCFF262PSO.bigWig hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF033VDX bed narrowPeak peaks ENCSR000EGJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MYC-human ENCAB000AET DNA see document see document False 2012-05-14 ENCODE 1 ENCFF058VAU, ENCFF710NTS 5482659 ENCODE Processing Pipeline d15682863af1bf809e031c7812eb0d88 https://www.encodeproject.org/files/ENCFF033VDX/@@download/ENCFF033VDX.bed.gz hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF114NSQ bigBed narrowPeak peaks ENCSR000EGJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MYC-human ENCAB000AET DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF165VLE 13190775 ENCODE Processing Pipeline e3fed3916fc4bf6c4855e7dcc8a3ab21 https://www.encodeproject.org/files/ENCFF114NSQ/@@download/ENCFF114NSQ.bigBed hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF883GJZ bigBed narrowPeak optimal idr thresholded peaks ENCSR000EGJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MYC-human ENCAB000AET DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF465JKF 1056426 ENCODE Processing Pipeline db01bb60de16985b65458a0ece8f10c1 https://www.encodeproject.org/files/ENCFF883GJZ/@@download/ENCFF883GJZ.bigBed hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF315VEZ bigWig signal p-value ENCSR000EGJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MYC-human ENCAB000AET DNA see document see document False 2012-05-14 ENCODE 1 ENCFF058VAU, ENCFF710NTS 469136772 ENCODE Processing Pipeline f436830f065d71e74e64901414757fde https://www.encodeproject.org/files/ENCFF315VEZ/@@download/ENCFF315VEZ.bigWig hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF517LFR bigWig signal p-value ENCSR000EGJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MYC-human ENCAB000AET DNA see document see document False 2012-05-14 ENCODE 2 ENCFF384WMI, ENCFF710NTS 473194751 ENCODE Processing Pipeline 5a244053e346d00140e0f3649c3ac6b3 https://www.encodeproject.org/files/ENCFF517LFR/@@download/ENCFF517LFR.bigWig hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF019DFB bed narrowPeak peaks ENCSR000EGJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MYC-human ENCAB000AET DNA see document see document False 2012-05-14 ENCODE 2 ENCFF384WMI, ENCFF710NTS 5488272 ENCODE Processing Pipeline 664ac255bd20196d280131b4d8a991c6 https://www.encodeproject.org/files/ENCFF019DFB/@@download/ENCFF019DFB.bed.gz hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF818LJK bigBed narrowPeak peaks ENCSR000EGJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MYC-human ENCAB000AET DNA see document see document False 2012-05-14 ENCODE 1 ENCFF033VDX 12933225 ENCODE Processing Pipeline a6d79cbd20bf4e58c8110b4fe943e879 https://www.encodeproject.org/files/ENCFF818LJK/@@download/ENCFF818LJK.bigBed hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF866BOC bigBed narrowPeak peaks ENCSR000EGJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MYC-human ENCAB000AET DNA see document see document False 2012-05-14 ENCODE 2 ENCFF019DFB 13129530 ENCODE Processing Pipeline 17872cd2faaaf4f43bea9c52e5bbf4a0 https://www.encodeproject.org/files/ENCFF866BOC/@@download/ENCFF866BOC.bigBed hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF123QDZ bigWig signal p-value ENCSR000EGJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MYC-human ENCAB000AET DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF058VAU, ENCFF384WMI, ENCFF710NTS 583736097 ENCODE Processing Pipeline c23ec500f89a4afac0020ce1d1a0f1c4 https://www.encodeproject.org/files/ENCFF123QDZ/@@download/ENCFF123QDZ.bigWig hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF790FHL bigWig fold change over control ENCSR000EGJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MYC-human ENCAB000AET DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF058VAU, ENCFF384WMI, ENCFF710NTS 617596899 ENCODE Processing Pipeline fe72942ee4899b3479eda2ab8be0bd3f https://www.encodeproject.org/files/ENCFF790FHL/@@download/ENCFF790FHL.bigWig hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF465JKF bed narrowPeak optimal idr thresholded peaks ENCSR000EGJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MYC-human ENCAB000AET DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF001TDO, ENCFF019DFB, ENCFF033VDX, ENCFF165VLE 538620 ENCODE Processing Pipeline 146303efe433182be7daba2298a9ffda https://www.encodeproject.org/files/ENCFF465JKF/@@download/ENCFF465JKF.bed.gz hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF427ONC bigWig fold change over control ENCSR000EGJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MYC-human ENCAB000AET DNA see document see document False 2012-05-14 ENCODE 2 ENCFF384WMI, ENCFF710NTS 391906454 ENCODE Processing Pipeline 75926e5b07b39fd694264d31f4abb517 https://www.encodeproject.org/files/ENCFF427ONC/@@download/ENCFF427ONC.bigWig hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF165VLE bed narrowPeak peaks ENCSR000EGJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MYC-human ENCAB000AET DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF058VAU, ENCFF384WMI, ENCFF710NTS 6265667 ENCODE Processing Pipeline 1fa1366a66d1a0284ddfb6071f0338be https://www.encodeproject.org/files/ENCFF165VLE/@@download/ENCFF165VLE.bed.gz hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF596JXE bed narrowPeak conservative idr thresholded peaks ENCSR000EGJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MYC-human ENCAB000AET DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF001TDO, ENCFF019DFB, ENCFF033VDX, ENCFF165VLE 515085 ENCODE Processing Pipeline daaaf17f1f147738a05496c1ffb5aba4 https://www.encodeproject.org/files/ENCFF596JXE/@@download/ENCFF596JXE.bed.gz hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF388BVD bigBed narrowPeak conservative idr thresholded peaks ENCSR000EGJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MYC-human ENCAB000AET DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF596JXE 1020831 ENCODE Processing Pipeline cd9763415c4b1d827d6ee4ad4729b0a5 https://www.encodeproject.org/files/ENCFF388BVD/@@download/ENCFF388BVD.bigBed hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF000YYB bam alignments ENCSR000EGO ChIP-seq EFO:0002067 K562 cell line Homo sapiens RFX5-human ENCAB000AKJ DNA see document see document False 2011-10-29 ENCODE 1 1 452721388 Michael Snyder, Stanford 67953e12b1fc038c413911229fb79c90 https://www.encodeproject.org/files/ENCFF000YYB/@@download/ENCFF000YYB.bam hg19 archived low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample, missing derived_from ENCFF000YYC bigBed narrowPeak peaks ENCSR000EGO ChIP-seq EFO:0002067 K562 cell line Homo sapiens RFX5-human ENCAB000AKJ DNA see document see document False 2011-10-29 ENCODE ENCFF001VON 1363120 Michael Snyder, Stanford 878161f78ae00015c58531271243b710 https://www.encodeproject.org/files/ENCFF000YYC/@@download/ENCFF000YYC.bigBed hg19 archived low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF000YYD fastq reads ENCSR000EGO ChIP-seq EFO:0002067 K562 cell line Homo sapiens RFX5-human ENCAB000AKJ DNA see document see document False 2011-10-29 ENCODE 1 1 36 single-ended 970850461 Michael Snyder, Stanford 34daf8ecbb8a189daac631d409e36249 https://www.encodeproject.org/files/ENCFF000YYD/@@download/ENCFF000YYD.fastq.gz Illumina Genome Analyzer /files/ENCFF000YRB/ released low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF000YYF fastq reads ENCSR000EGO ChIP-seq EFO:0002067 K562 cell line Homo sapiens RFX5-human ENCAB000AKJ DNA see document see document False 2011-10-29 ENCODE 2 1 36 single-ended 408969102 Michael Snyder, Stanford 2e472c6f552700559ef86a02d75180a2 https://www.encodeproject.org/files/ENCFF000YYF/@@download/ENCFF000YYF.fastq.gz Illumina Genome Analyzer /files/ENCFF000YRB/ released low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF000YYG bam alignments ENCSR000EGO ChIP-seq EFO:0002067 K562 cell line Homo sapiens RFX5-human ENCAB000AKJ DNA see document see document False 2011-10-29 ENCODE 2 1 567294678 Michael Snyder, Stanford 0d2a07f30aaec2c8159b4f3e480d350e https://www.encodeproject.org/files/ENCFF000YYG/@@download/ENCFF000YYG.bam hg19 archived low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample, missing derived_from ENCFF000YYK bigWig signal ENCSR000EGO ChIP-seq EFO:0002067 K562 cell line Homo sapiens RFX5-human ENCAB000AKJ DNA see document see document False 2011-10-29 ENCODE 382160354 Michael Snyder, Stanford d299cecee661b156a022b96fa7f26d7f https://www.encodeproject.org/files/ENCFF000YYK/@@download/ENCFF000YYK.bigWig hg19 archived low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample, missing derived_from ENCFF001VON bed narrowPeak peaks ENCSR000EGO ChIP-seq EFO:0002067 K562 cell line Homo sapiens RFX5-human ENCAB000AKJ DNA see document see document False 2011-10-29 ENCODE 692673 Michael Snyder, Stanford ae84b26b09857dfc02444fcf70734f7e https://www.encodeproject.org/files/ENCFF001VON/@@download/ENCFF001VON.bed.gz hg19 archived low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample, missing derived_from ENCFF002CXV bed narrowPeak optimal idr thresholded peaks ENCSR000EGO ChIP-seq EFO:0002067 K562 cell line Homo sapiens RFX5-human ENCAB000AKJ DNA see document see document False 2011-10-29 ENCODE 58297 ENCODE Consortium Analysis Working Group 84fc3a4909c0a97058659fbe659e0f55 https://www.encodeproject.org/files/ENCFF002CXV/@@download/ENCFF002CXV.bed.gz hg19 archived low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample, missing derived_from ENCFF000YYI fastq reads ENCSR000EGO ChIP-seq EFO:0002067 K562 cell line Homo sapiens RFX5-human ENCAB000AKJ DNA see document see document False 2011-10-29 ENCODE 2 1 36 single-ended 752905350 Michael Snyder, Stanford 685922e559ff843434f5014bdc64376d https://www.encodeproject.org/files/ENCFF000YYI/@@download/ENCFF000YYI.fastq.gz Illumina Genome Analyzer /files/ENCFF000YRB/ released low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF735RKE bigBed narrowPeak optimal idr thresholded peaks ENCSR000EGO ChIP-seq EFO:0002067 K562 cell line Homo sapiens RFX5-human ENCAB000AKJ DNA see document see document False 2011-10-29 ENCODE ENCFF002CXV 215885 ENCODE Consortium 8397fc3b310ff4dc3bed48d4f6325c97 https://www.encodeproject.org/files/ENCFF735RKE/@@download/ENCFF735RKE.bigBed hg19 archived low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF050AHY bam unfiltered alignments ENCSR000EGO ChIP-seq EFO:0002067 K562 cell line Homo sapiens RFX5-human ENCAB000AKJ DNA see document see document False 2011-10-29 ENCODE 1 36 ENCFF000YYD, ENCFF643CGH 1111494124 ENCODE Processing Pipeline ed8b524e3a3fafea2c20abab473d3a17 https://www.encodeproject.org/files/ENCFF050AHY/@@download/ENCFF050AHY.bam GRCh38 released low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF230AXK bam alignments ENCSR000EGO ChIP-seq EFO:0002067 K562 cell line Homo sapiens RFX5-human ENCAB000AKJ DNA see document see document False 2011-10-29 ENCODE 1 36 ENCFF000YYD, ENCFF643CGH 673074017 ENCODE Processing Pipeline 97ddef74c908182c168ca023ac06abe3 https://www.encodeproject.org/files/ENCFF230AXK/@@download/ENCFF230AXK.bam GRCh38 released low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF841IIA bam unfiltered alignments ENCSR000EGO ChIP-seq EFO:0002067 K562 cell line Homo sapiens RFX5-human ENCAB000AKJ DNA see document see document False 2011-10-29 ENCODE 2 36 ENCFF000YYF, ENCFF000YYI, ENCFF643CGH 1319597171 ENCODE Processing Pipeline b107a4b11ed571ade42c12c3d38911a7 https://www.encodeproject.org/files/ENCFF841IIA/@@download/ENCFF841IIA.bam GRCh38 released low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF524SJJ bam alignments ENCSR000EGO ChIP-seq EFO:0002067 K562 cell line Homo sapiens RFX5-human ENCAB000AKJ DNA see document see document False 2011-10-29 ENCODE 2 36 ENCFF000YYF, ENCFF000YYI, ENCFF643CGH 831996692 ENCODE Processing Pipeline 932ce9033c058f65999d7cf311fab01e https://www.encodeproject.org/files/ENCFF524SJJ/@@download/ENCFF524SJJ.bam GRCh38 released low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF045DPH bam unfiltered alignments ENCSR000EGO ChIP-seq EFO:0002067 K562 cell line Homo sapiens RFX5-human ENCAB000AKJ DNA see document see document False 2011-10-29 ENCODE 1 36 ENCFF000YYD, ENCFF807MUK 1106426329 ENCODE Processing Pipeline f986941167fe5e70bd442abfaa32c86f https://www.encodeproject.org/files/ENCFF045DPH/@@download/ENCFF045DPH.bam hg19 released low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF868YCY bam alignments ENCSR000EGO ChIP-seq EFO:0002067 K562 cell line Homo sapiens RFX5-human ENCAB000AKJ DNA see document see document False 2011-10-29 ENCODE 1 36 ENCFF000YYD, ENCFF807MUK 673472414 ENCODE Processing Pipeline 0c79ce8d46ae2a2a6aec04b611944630 https://www.encodeproject.org/files/ENCFF868YCY/@@download/ENCFF868YCY.bam hg19 released low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF325VWA bam alignments ENCSR000EGO ChIP-seq EFO:0002067 K562 cell line Homo sapiens RFX5-human ENCAB000AKJ DNA see document see document False 2011-10-29 ENCODE 2 36 ENCFF000YYF, ENCFF000YYI, ENCFF807MUK 832546989 ENCODE Processing Pipeline 8c98fad8e45eaa30e7ffe1d628bc4669 https://www.encodeproject.org/files/ENCFF325VWA/@@download/ENCFF325VWA.bam hg19 released low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF703AZV bam unfiltered alignments ENCSR000EGO ChIP-seq EFO:0002067 K562 cell line Homo sapiens RFX5-human ENCAB000AKJ DNA see document see document False 2011-10-29 ENCODE 2 36 ENCFF000YYF, ENCFF000YYI, ENCFF807MUK 1313838600 ENCODE Processing Pipeline 1ad1e2a0883e5a38bc7f0970c76325a0 https://www.encodeproject.org/files/ENCFF703AZV/@@download/ENCFF703AZV.bam hg19 released low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF660TXA bigWig signal p-value ENCSR000EGO ChIP-seq EFO:0002067 K562 cell line Homo sapiens RFX5-human ENCAB000AKJ DNA see document see document False 2011-10-29 ENCODE 1 ENCFF023NGN, ENCFF230AXK 402840325 ENCODE Processing Pipeline f85665a93ba927a783bcabed2021e442 https://www.encodeproject.org/files/ENCFF660TXA/@@download/ENCFF660TXA.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF573KBS bigWig signal p-value ENCSR000EGO ChIP-seq EFO:0002067 K562 cell line Homo sapiens RFX5-human ENCAB000AKJ DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF023NGN, ENCFF230AXK, ENCFF524SJJ 530639657 ENCODE Processing Pipeline 294eed076083f4d94f403e1a145f1888 https://www.encodeproject.org/files/ENCFF573KBS/@@download/ENCFF573KBS.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF142DJS bigWig signal p-value ENCSR000EGO ChIP-seq EFO:0002067 K562 cell line Homo sapiens RFX5-human ENCAB000AKJ DNA see document see document False 2011-10-29 ENCODE 2 ENCFF023NGN, ENCFF524SJJ 484257728 ENCODE Processing Pipeline bd880297b369057951773d88948a75f5 https://www.encodeproject.org/files/ENCFF142DJS/@@download/ENCFF142DJS.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF163QMH bigWig fold change over control ENCSR000EGO ChIP-seq EFO:0002067 K562 cell line Homo sapiens RFX5-human ENCAB000AKJ DNA see document see document False 2011-10-29 ENCODE 1 ENCFF023NGN, ENCFF230AXK 335777982 ENCODE Processing Pipeline 096bf7cb5384b84f177daa349e6f3389 https://www.encodeproject.org/files/ENCFF163QMH/@@download/ENCFF163QMH.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF396PRO bigWig fold change over control ENCSR000EGO ChIP-seq EFO:0002067 K562 cell line Homo sapiens RFX5-human ENCAB000AKJ DNA see document see document False 2011-10-29 ENCODE 2 ENCFF023NGN, ENCFF524SJJ 432598113 ENCODE Processing Pipeline 9706d5f62b65538e0a50d643e95f0e36 https://www.encodeproject.org/files/ENCFF396PRO/@@download/ENCFF396PRO.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF559GNS bigWig fold change over control ENCSR000EGO ChIP-seq EFO:0002067 K562 cell line Homo sapiens RFX5-human ENCAB000AKJ DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF023NGN, ENCFF230AXK, ENCFF524SJJ 650848622 ENCODE Processing Pipeline e599c9d524769ef9e25fbf6ca02c7d3a https://www.encodeproject.org/files/ENCFF559GNS/@@download/ENCFF559GNS.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF028BEG bed narrowPeak peaks ENCSR000EGO ChIP-seq EFO:0002067 K562 cell line Homo sapiens RFX5-human ENCAB000AKJ DNA see document see document False 2011-10-29 ENCODE 1 ENCFF023NGN, ENCFF230AXK 4463047 ENCODE Processing Pipeline ca85d454235eb712d2ee7c09e92e0927 https://www.encodeproject.org/files/ENCFF028BEG/@@download/ENCFF028BEG.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF987EZQ bed narrowPeak peaks ENCSR000EGO ChIP-seq EFO:0002067 K562 cell line Homo sapiens RFX5-human ENCAB000AKJ DNA see document see document False 2011-10-29 ENCODE 2 ENCFF023NGN, ENCFF524SJJ 4812459 ENCODE Processing Pipeline ea7c20c17795878c5011679ea356c919 https://www.encodeproject.org/files/ENCFF987EZQ/@@download/ENCFF987EZQ.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF194HRP bed narrowPeak peaks ENCSR000EGO ChIP-seq EFO:0002067 K562 cell line Homo sapiens RFX5-human ENCAB000AKJ DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF023NGN, ENCFF230AXK, ENCFF524SJJ 5609663 ENCODE Processing Pipeline 7c3760b175baeae2db0853c7e80a3d2e https://www.encodeproject.org/files/ENCFF194HRP/@@download/ENCFF194HRP.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF436JKE bed narrowPeak conservative idr thresholded peaks ENCSR000EGO ChIP-seq EFO:0002067 K562 cell line Homo sapiens RFX5-human ENCAB000AKJ DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF028BEG, ENCFF194HRP, ENCFF419RSJ, ENCFF987EZQ 45311 ENCODE Processing Pipeline 87f9affef93e43fc5c69ec3cfdd62f9a https://www.encodeproject.org/files/ENCFF436JKE/@@download/ENCFF436JKE.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF857SWW bigBed narrowPeak peaks ENCSR000EGO ChIP-seq EFO:0002067 K562 cell line Homo sapiens RFX5-human ENCAB000AKJ DNA see document see document False 2011-10-29 ENCODE 1 ENCFF028BEG 10726987 ENCODE Processing Pipeline 076ae28c1809beb9b6e2e655c22a08a8 https://www.encodeproject.org/files/ENCFF857SWW/@@download/ENCFF857SWW.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF168FNI bigBed narrowPeak peaks ENCSR000EGO ChIP-seq EFO:0002067 K562 cell line Homo sapiens RFX5-human ENCAB000AKJ DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF194HRP 11253077 ENCODE Processing Pipeline 770aaa72833093c5f6d401fa879ac3b5 https://www.encodeproject.org/files/ENCFF168FNI/@@download/ENCFF168FNI.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF201YKU bed narrowPeak optimal idr thresholded peaks ENCSR000EGO ChIP-seq EFO:0002067 K562 cell line Homo sapiens RFX5-human ENCAB000AKJ DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF028BEG, ENCFF194HRP, ENCFF419RSJ, ENCFF987EZQ 52141 ENCODE Processing Pipeline 65cdb837880f17e81c348718cbe89cdc https://www.encodeproject.org/files/ENCFF201YKU/@@download/ENCFF201YKU.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF149AZS bigBed narrowPeak peaks ENCSR000EGO ChIP-seq EFO:0002067 K562 cell line Homo sapiens RFX5-human ENCAB000AKJ DNA see document see document False 2011-10-29 ENCODE 2 ENCFF987EZQ 11040684 ENCODE Processing Pipeline 5e73a15ca2b5e029ecbc6679f92cb8d8 https://www.encodeproject.org/files/ENCFF149AZS/@@download/ENCFF149AZS.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF213UXP bigBed narrowPeak conservative idr thresholded peaks ENCSR000EGO ChIP-seq EFO:0002067 K562 cell line Homo sapiens RFX5-human ENCAB000AKJ DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF436JKE 129497 ENCODE Processing Pipeline 44bff559fdc0f44b157461e7aaa1c31d https://www.encodeproject.org/files/ENCFF213UXP/@@download/ENCFF213UXP.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF364LMD bigBed narrowPeak optimal idr thresholded peaks ENCSR000EGO ChIP-seq EFO:0002067 K562 cell line Homo sapiens RFX5-human ENCAB000AKJ DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF201YKU 164078 ENCODE Processing Pipeline 74dd604667ef4705c4a886f0553eb358 https://www.encodeproject.org/files/ENCFF364LMD/@@download/ENCFF364LMD.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF165HKU bigWig signal p-value ENCSR000EGO ChIP-seq EFO:0002067 K562 cell line Homo sapiens RFX5-human ENCAB000AKJ DNA see document see document False 2011-10-29 ENCODE 1 ENCFF710NTS, ENCFF868YCY 403184112 ENCODE Processing Pipeline c689805713acddd634d12b4cf8eca4bd https://www.encodeproject.org/files/ENCFF165HKU/@@download/ENCFF165HKU.bigWig hg19 released low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF227GXP bigBed narrowPeak peaks ENCSR000EGO ChIP-seq EFO:0002067 K562 cell line Homo sapiens RFX5-human ENCAB000AKJ DNA see document see document False 2011-10-29 ENCODE 1 ENCFF536YVV 10702385 ENCODE Processing Pipeline 84409ad6b6fe40460232fcd8ebb55468 https://www.encodeproject.org/files/ENCFF227GXP/@@download/ENCFF227GXP.bigBed hg19 released low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF716LRI bed narrowPeak optimal idr thresholded peaks ENCSR000EGO ChIP-seq EFO:0002067 K562 cell line Homo sapiens RFX5-human ENCAB000AKJ DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF001TDO, ENCFF066GNV, ENCFF439SZI, ENCFF536YVV 52639 ENCODE Processing Pipeline 175fa8254c3ee7f766ed461e264093dd https://www.encodeproject.org/files/ENCFF716LRI/@@download/ENCFF716LRI.bed.gz hg19 released low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF527UGT bigBed narrowPeak optimal idr thresholded peaks ENCSR000EGO ChIP-seq EFO:0002067 K562 cell line Homo sapiens RFX5-human ENCAB000AKJ DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF716LRI 163950 ENCODE Processing Pipeline f89a64426b59f8add0711811e07c87f5 https://www.encodeproject.org/files/ENCFF527UGT/@@download/ENCFF527UGT.bigBed hg19 released low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF754XPF bigWig signal p-value ENCSR000EGO ChIP-seq EFO:0002067 K562 cell line Homo sapiens RFX5-human ENCAB000AKJ DNA see document see document False 2011-10-29 ENCODE 2 ENCFF325VWA, ENCFF710NTS 482731778 ENCODE Processing Pipeline a4b4be371e4d0847d3a1dddf3b163c6f https://www.encodeproject.org/files/ENCFF754XPF/@@download/ENCFF754XPF.bigWig hg19 released low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF299FKZ bigWig fold change over control ENCSR000EGO ChIP-seq EFO:0002067 K562 cell line Homo sapiens RFX5-human ENCAB000AKJ DNA see document see document False 2011-10-29 ENCODE 2 ENCFF325VWA, ENCFF710NTS 430277182 ENCODE Processing Pipeline 8e66fb339e0b29dd6f2fbc8999d8d856 https://www.encodeproject.org/files/ENCFF299FKZ/@@download/ENCFF299FKZ.bigWig hg19 released low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF759LQL bigWig fold change over control ENCSR000EGO ChIP-seq EFO:0002067 K562 cell line Homo sapiens RFX5-human ENCAB000AKJ DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF325VWA, ENCFF710NTS, ENCFF868YCY 646995691 ENCODE Processing Pipeline 1a22958238d506ec30522e8f75ba7893 https://www.encodeproject.org/files/ENCFF759LQL/@@download/ENCFF759LQL.bigWig hg19 released low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF606HXD bigWig fold change over control ENCSR000EGO ChIP-seq EFO:0002067 K562 cell line Homo sapiens RFX5-human ENCAB000AKJ DNA see document see document False 2011-10-29 ENCODE 1 ENCFF710NTS, ENCFF868YCY 336442963 ENCODE Processing Pipeline ef434fd47395bdda80901a1002b673ef https://www.encodeproject.org/files/ENCFF606HXD/@@download/ENCFF606HXD.bigWig hg19 released low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF536YVV bed narrowPeak peaks ENCSR000EGO ChIP-seq EFO:0002067 K562 cell line Homo sapiens RFX5-human ENCAB000AKJ DNA see document see document False 2011-10-29 ENCODE 1 ENCFF710NTS, ENCFF868YCY 4405762 ENCODE Processing Pipeline 2353777e3b8f76d67d0bf9af71a94f3d https://www.encodeproject.org/files/ENCFF536YVV/@@download/ENCFF536YVV.bed.gz hg19 released low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF392KHS bigBed narrowPeak peaks ENCSR000EGO ChIP-seq EFO:0002067 K562 cell line Homo sapiens RFX5-human ENCAB000AKJ DNA see document see document False 2011-10-29 ENCODE 2 ENCFF439SZI 11035566 ENCODE Processing Pipeline 9bdcfd9edb6b2820c680cb3ff25ba20b https://www.encodeproject.org/files/ENCFF392KHS/@@download/ENCFF392KHS.bigBed hg19 released low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF145PCR bigBed narrowPeak peaks ENCSR000EGO ChIP-seq EFO:0002067 K562 cell line Homo sapiens RFX5-human ENCAB000AKJ DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF066GNV 11248334 ENCODE Processing Pipeline 13861a3002c3669fb4c5edfcf5529f98 https://www.encodeproject.org/files/ENCFF145PCR/@@download/ENCFF145PCR.bigBed hg19 released low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF738IGV bigWig signal p-value ENCSR000EGO ChIP-seq EFO:0002067 K562 cell line Homo sapiens RFX5-human ENCAB000AKJ DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF325VWA, ENCFF710NTS, ENCFF868YCY 528966041 ENCODE Processing Pipeline 5c69e059888a2ed2f05c70b6961154c6 https://www.encodeproject.org/files/ENCFF738IGV/@@download/ENCFF738IGV.bigWig hg19 released low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF581CEN bed narrowPeak conservative idr thresholded peaks ENCSR000EGO ChIP-seq EFO:0002067 K562 cell line Homo sapiens RFX5-human ENCAB000AKJ DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF001TDO, ENCFF066GNV, ENCFF439SZI, ENCFF536YVV 45085 ENCODE Processing Pipeline 200f0fa3922bb4ee512042a7cd5730e2 https://www.encodeproject.org/files/ENCFF581CEN/@@download/ENCFF581CEN.bed.gz hg19 released low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF439SZI bed narrowPeak peaks ENCSR000EGO ChIP-seq EFO:0002067 K562 cell line Homo sapiens RFX5-human ENCAB000AKJ DNA see document see document False 2011-10-29 ENCODE 2 ENCFF325VWA, ENCFF710NTS 4815522 ENCODE Processing Pipeline 10145ccca4d460e694c04cd4cb50c12e https://www.encodeproject.org/files/ENCFF439SZI/@@download/ENCFF439SZI.bed.gz hg19 released low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF066GNV bed narrowPeak peaks ENCSR000EGO ChIP-seq EFO:0002067 K562 cell line Homo sapiens RFX5-human ENCAB000AKJ DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF325VWA, ENCFF710NTS, ENCFF868YCY 5615665 ENCODE Processing Pipeline ecefb6d16a3485a1f3c69a4ec816e60c https://www.encodeproject.org/files/ENCFF066GNV/@@download/ENCFF066GNV.bed.gz hg19 released low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF058VMS bigBed narrowPeak conservative idr thresholded peaks ENCSR000EGO ChIP-seq EFO:0002067 K562 cell line Homo sapiens RFX5-human ENCAB000AKJ DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF581CEN 128334 ENCODE Processing Pipeline 0fe3bcf165a082a41474fb2ff9b1c8a4 https://www.encodeproject.org/files/ENCFF058VMS/@@download/ENCFF058VMS.bigBed hg19 released low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF000YWZ bam alignments ENCSR000EGF ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2AphosphoS2-human ENCAB000AOB DNA see document see document False 2012-05-14 ENCODE 1 1 584506849 Michael Snyder, Stanford eb7dfd9cfce147b2134efb217e8e235d https://www.encodeproject.org/files/ENCFF000YWZ/@@download/ENCFF000YWZ.bam hg19 archived low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample, missing derived_from ENCFF000YXA bam alignments ENCSR000EGF ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2AphosphoS2-human ENCAB000AOB DNA see document see document False 2012-05-14 ENCODE 2 1 531186813 Michael Snyder, Stanford c6782813723963b7ea1d0f9eb0375b97 https://www.encodeproject.org/files/ENCFF000YXA/@@download/ENCFF000YXA.bam hg19 archived low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample, missing derived_from ENCFF000YXB bigBed narrowPeak peaks ENCSR000EGF ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2AphosphoS2-human ENCAB000AOB DNA see document see document False 2012-05-14 ENCODE ENCFF001VOJ 3868117 Michael Snyder, Stanford 9f6c5e293e4355f456ee1107fd156627 https://www.encodeproject.org/files/ENCFF000YXB/@@download/ENCFF000YXB.bigBed hg19 archived low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF000YXC fastq reads ENCSR000EGF ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2AphosphoS2-human ENCAB000AOB DNA see document see document False 2012-05-14 ENCODE 1 1 36 single-ended 1027202514 Michael Snyder, Stanford 9f499956da15b0a67cd7a1fff0952797 https://www.encodeproject.org/files/ENCFF000YXC/@@download/ENCFF000YXC.fastq.gz Illumina Genome Analyzer /files/ENCFF000YRB/ released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF000YXE fastq reads ENCSR000EGF ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2AphosphoS2-human ENCAB000AOB DNA see document see document False 2012-05-14 ENCODE 2 1 36 single-ended 975573627 Michael Snyder, Stanford 17c79b35798f2af1d284e5727ec6dbd5 https://www.encodeproject.org/files/ENCFF000YXE/@@download/ENCFF000YXE.fastq.gz Illumina Genome Analyzer /files/ENCFF000YRB/ released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF000YXI bigWig signal ENCSR000EGF ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2AphosphoS2-human ENCAB000AOB DNA see document see document False 2012-05-14 ENCODE 390666828 Michael Snyder, Stanford e0adc91e50615ec823d2ebd3055b5a06 https://www.encodeproject.org/files/ENCFF000YXI/@@download/ENCFF000YXI.bigWig hg19 archived low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample, missing derived_from ENCFF001VOJ bed narrowPeak peaks ENCSR000EGF ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2AphosphoS2-human ENCAB000AOB DNA see document see document False 2012-05-14 ENCODE 1785687 Michael Snyder, Stanford 5f7f919615060c200ba047bece218c5e https://www.encodeproject.org/files/ENCFF001VOJ/@@download/ENCFF001VOJ.bed.gz hg19 archived low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample, missing derived_from ENCFF002CXS bed narrowPeak optimal idr thresholded peaks ENCSR000EGF ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2AphosphoS2-human ENCAB000AOB DNA see document see document False 2012-05-14 ENCODE 112983 ENCODE Consortium Analysis Working Group 92403e1ae30fd8ab1f735a7344bbfbd3 https://www.encodeproject.org/files/ENCFF002CXS/@@download/ENCFF002CXS.bed.gz hg19 archived low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample, missing derived_from ENCFF213IPM bigBed narrowPeak optimal idr thresholded peaks ENCSR000EGF ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2AphosphoS2-human ENCAB000AOB DNA see document see document False 2012-05-14 ENCODE ENCFF002CXS 333436 ENCODE Consortium c40be9a9eb258cdcc48b2dd429700d51 https://www.encodeproject.org/files/ENCFF213IPM/@@download/ENCFF213IPM.bigBed hg19 archived low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF582VZH bam unfiltered alignments ENCSR000EGF ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2AphosphoS2-human ENCAB000AOB DNA see document see document False 2012-05-14 ENCODE 1 36 ENCFF000YXC, ENCFF807MUK 1143750879 ENCODE Processing Pipeline fd2d3de8fa26a67313a64440cefe4339 https://www.encodeproject.org/files/ENCFF582VZH/@@download/ENCFF582VZH.bam hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF202GPN bam unfiltered alignments ENCSR000EGF ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2AphosphoS2-human ENCAB000AOB DNA see document see document False 2012-05-14 ENCODE 2 36 ENCFF000YXE, ENCFF807MUK 1100612809 ENCODE Processing Pipeline 2d77f408ad4bc6f0fa44c0f0f0636fb4 https://www.encodeproject.org/files/ENCFF202GPN/@@download/ENCFF202GPN.bam hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF263ZPM bam alignments ENCSR000EGF ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2AphosphoS2-human ENCAB000AOB DNA see document see document False 2012-05-14 ENCODE 1 36 ENCFF000YXC, ENCFF807MUK 827464358 ENCODE Processing Pipeline f1141e9454d68f0ceb3255b274f1f2c3 https://www.encodeproject.org/files/ENCFF263ZPM/@@download/ENCFF263ZPM.bam hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF207UON bam alignments ENCSR000EGF ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2AphosphoS2-human ENCAB000AOB DNA see document see document False 2012-05-14 ENCODE 2 36 ENCFF000YXE, ENCFF807MUK 803810930 ENCODE Processing Pipeline a85141cd50167b4d8d8a760fb37cb6f9 https://www.encodeproject.org/files/ENCFF207UON/@@download/ENCFF207UON.bam hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF811ZTI bam unfiltered alignments ENCSR000EGF ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2AphosphoS2-human ENCAB000AOB DNA see document see document False 2012-05-14 ENCODE 2 36 ENCFF000YXE, ENCFF643CGH 1102658797 ENCODE Processing Pipeline 9b28feccf3b5614b8a3edbdca60e3c3b https://www.encodeproject.org/files/ENCFF811ZTI/@@download/ENCFF811ZTI.bam GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF495NNH bam unfiltered alignments ENCSR000EGF ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2AphosphoS2-human ENCAB000AOB DNA see document see document False 2012-05-14 ENCODE 1 36 ENCFF000YXC, ENCFF643CGH 1146105927 ENCODE Processing Pipeline 07a4e384a3b31accffdf09de4fe5ad8c https://www.encodeproject.org/files/ENCFF495NNH/@@download/ENCFF495NNH.bam GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF630JRN bam alignments ENCSR000EGF ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2AphosphoS2-human ENCAB000AOB DNA see document see document False 2012-05-14 ENCODE 1 36 ENCFF000YXC, ENCFF643CGH 826249394 ENCODE Processing Pipeline e2639e30b1eb362a20f3b066cf044905 https://www.encodeproject.org/files/ENCFF630JRN/@@download/ENCFF630JRN.bam GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF594OID bam alignments ENCSR000EGF ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2AphosphoS2-human ENCAB000AOB DNA see document see document False 2012-05-14 ENCODE 2 36 ENCFF000YXE, ENCFF643CGH 802739068 ENCODE Processing Pipeline 8d58a4c636690568dcdbac14a2601a77 https://www.encodeproject.org/files/ENCFF594OID/@@download/ENCFF594OID.bam GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF388ATO bed narrowPeak peaks ENCSR000EGF ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2AphosphoS2-human ENCAB000AOB DNA see document see document False 2012-05-14 ENCODE 1 ENCFF263ZPM, ENCFF710NTS 6963167 ENCODE Processing Pipeline 194e237e1eb582828183e76472f0d467 https://www.encodeproject.org/files/ENCFF388ATO/@@download/ENCFF388ATO.bed.gz hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF354XDX bigWig fold change over control ENCSR000EGF ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2AphosphoS2-human ENCAB000AOB DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF207UON, ENCFF263ZPM, ENCFF710NTS 600239038 ENCODE Processing Pipeline 1212b84c8f7195d7bf7eaa26eb7463df https://www.encodeproject.org/files/ENCFF354XDX/@@download/ENCFF354XDX.bigWig hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF999VYN bigWig signal p-value ENCSR000EGF ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2AphosphoS2-human ENCAB000AOB DNA see document see document False 2012-05-14 ENCODE 1 ENCFF263ZPM, ENCFF710NTS 589240279 ENCODE Processing Pipeline 89b15ee4238ad4a7893df0815a97f7e9 https://www.encodeproject.org/files/ENCFF999VYN/@@download/ENCFF999VYN.bigWig hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF987CNI bigWig fold change over control ENCSR000EGF ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2AphosphoS2-human ENCAB000AOB DNA see document see document False 2012-05-14 ENCODE 1 ENCFF263ZPM, ENCFF710NTS 332868877 ENCODE Processing Pipeline cb3165d0a146562ccc04043a276a29f8 https://www.encodeproject.org/files/ENCFF987CNI/@@download/ENCFF987CNI.bigWig hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF070WZH bigBed narrowPeak conservative idr thresholded peaks ENCSR000EGF ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2AphosphoS2-human ENCAB000AOB DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF712GHT 348103 ENCODE Processing Pipeline 038253f52fd2365b504b58d6ba2630d2 https://www.encodeproject.org/files/ENCFF070WZH/@@download/ENCFF070WZH.bigBed hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF104IBO bigWig signal p-value ENCSR000EGF ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2AphosphoS2-human ENCAB000AOB DNA see document see document False 2012-05-14 ENCODE 2 ENCFF207UON, ENCFF710NTS 483875216 ENCODE Processing Pipeline 6eba5846db5e2cd1e7dce1d41c9ae333 https://www.encodeproject.org/files/ENCFF104IBO/@@download/ENCFF104IBO.bigWig hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF470KPQ bigWig signal p-value ENCSR000EGF ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2AphosphoS2-human ENCAB000AOB DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF207UON, ENCFF263ZPM, ENCFF710NTS 550285778 ENCODE Processing Pipeline 297f4abe8f8c42be6c96e77b5883d722 https://www.encodeproject.org/files/ENCFF470KPQ/@@download/ENCFF470KPQ.bigWig hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF528AUR bigWig fold change over control ENCSR000EGF ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2AphosphoS2-human ENCAB000AOB DNA see document see document False 2012-05-14 ENCODE 2 ENCFF207UON, ENCFF710NTS 322149183 ENCODE Processing Pipeline f732dc1c28efe2b62d2f4557a7ce26ad https://www.encodeproject.org/files/ENCFF528AUR/@@download/ENCFF528AUR.bigWig hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF932UHC bed narrowPeak peaks ENCSR000EGF ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2AphosphoS2-human ENCAB000AOB DNA see document see document False 2012-05-14 ENCODE 2 ENCFF207UON, ENCFF710NTS 7095210 ENCODE Processing Pipeline df87abde436c4eb20e311cfa808f3398 https://www.encodeproject.org/files/ENCFF932UHC/@@download/ENCFF932UHC.bed.gz hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF039RTS bed narrowPeak peaks ENCSR000EGF ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2AphosphoS2-human ENCAB000AOB DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF207UON, ENCFF263ZPM, ENCFF710NTS 7125640 ENCODE Processing Pipeline 5f5453e828ea7d250f70357dc366c9ea https://www.encodeproject.org/files/ENCFF039RTS/@@download/ENCFF039RTS.bed.gz hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF174BGI bigBed narrowPeak peaks ENCSR000EGF ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2AphosphoS2-human ENCAB000AOB DNA see document see document False 2012-05-14 ENCODE 1 ENCFF388ATO 11623565 ENCODE Processing Pipeline b71f9f4ddd3c5366c5fbf8d50dbec850 https://www.encodeproject.org/files/ENCFF174BGI/@@download/ENCFF174BGI.bigBed hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF354EJC bigBed narrowPeak peaks ENCSR000EGF ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2AphosphoS2-human ENCAB000AOB DNA see document see document False 2012-05-14 ENCODE 2 ENCFF932UHC 11411943 ENCODE Processing Pipeline 8f7f2f7ec23f445c2c20916202e4e823 https://www.encodeproject.org/files/ENCFF354EJC/@@download/ENCFF354EJC.bigBed hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF559IGQ bigBed narrowPeak peaks ENCSR000EGF ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2AphosphoS2-human ENCAB000AOB DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF039RTS 11517407 ENCODE Processing Pipeline 837d50ab2f4d818e490a48f6ae0b6283 https://www.encodeproject.org/files/ENCFF559IGQ/@@download/ENCFF559IGQ.bigBed hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF296CNQ bed narrowPeak optimal idr thresholded peaks ENCSR000EGF ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2AphosphoS2-human ENCAB000AOB DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF001TDO, ENCFF039RTS, ENCFF388ATO, ENCFF932UHC 185689 ENCODE Processing Pipeline 96912e3d9f88029951abcd019f3a5721 https://www.encodeproject.org/files/ENCFF296CNQ/@@download/ENCFF296CNQ.bed.gz hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF056KRR bigBed narrowPeak optimal idr thresholded peaks ENCSR000EGF ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2AphosphoS2-human ENCAB000AOB DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF296CNQ 452297 ENCODE Processing Pipeline 9666bff06001db02757785939d62fcab https://www.encodeproject.org/files/ENCFF056KRR/@@download/ENCFF056KRR.bigBed hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF712GHT bed narrowPeak conservative idr thresholded peaks ENCSR000EGF ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2AphosphoS2-human ENCAB000AOB DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF001TDO, ENCFF039RTS, ENCFF388ATO, ENCFF932UHC 132287 ENCODE Processing Pipeline c12b463ec2517a3d4ea9717b040c4e3c https://www.encodeproject.org/files/ENCFF712GHT/@@download/ENCFF712GHT.bed.gz hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF554KVR bigWig signal p-value ENCSR000EGF ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2AphosphoS2-human ENCAB000AOB DNA see document see document False 2012-05-14 ENCODE 1 ENCFF023NGN, ENCFF630JRN 499283423 ENCODE Processing Pipeline 29474a1034452ee26fc32f2636de4807 https://www.encodeproject.org/files/ENCFF554KVR/@@download/ENCFF554KVR.bigWig GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF171FGN bigBed narrowPeak peaks ENCSR000EGF ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2AphosphoS2-human ENCAB000AOB DNA see document see document False 2012-05-14 ENCODE 1 ENCFF222KTC 11635066 ENCODE Processing Pipeline e0d8b01edf7f3275dcf1d0ec567743fc https://www.encodeproject.org/files/ENCFF171FGN/@@download/ENCFF171FGN.bigBed GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF706RRL bigBed narrowPeak optimal idr thresholded peaks ENCSR000EGF ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2AphosphoS2-human ENCAB000AOB DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF266OPF 477195 ENCODE Processing Pipeline c8b4966c30e29ff52ed65517521cea62 https://www.encodeproject.org/files/ENCFF706RRL/@@download/ENCFF706RRL.bigBed GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF881EJC bigWig fold change over control ENCSR000EGF ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2AphosphoS2-human ENCAB000AOB DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF023NGN, ENCFF594OID, ENCFF630JRN 556254311 ENCODE Processing Pipeline beae52668fee0eb56e668083f281abb1 https://www.encodeproject.org/files/ENCFF881EJC/@@download/ENCFF881EJC.bigWig GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF568KQU bigBed narrowPeak peaks ENCSR000EGF ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2AphosphoS2-human ENCAB000AOB DNA see document see document False 2012-05-14 ENCODE 2 ENCFF137UHI 11415477 ENCODE Processing Pipeline 4b25593f2f87345e568068183e435fd8 https://www.encodeproject.org/files/ENCFF568KQU/@@download/ENCFF568KQU.bigBed GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF254IOJ bigBed narrowPeak peaks ENCSR000EGF ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2AphosphoS2-human ENCAB000AOB DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF446MMZ 11553472 ENCODE Processing Pipeline 7295b0c9a1f986c7cbbc4cf48a171462 https://www.encodeproject.org/files/ENCFF254IOJ/@@download/ENCFF254IOJ.bigBed GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF027TJN bed narrowPeak conservative idr thresholded peaks ENCSR000EGF ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2AphosphoS2-human ENCAB000AOB DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF137UHI, ENCFF222KTC, ENCFF419RSJ, ENCFF446MMZ 129023 ENCODE Processing Pipeline b4c9dbc4a4e524a0aac441b41a352c37 https://www.encodeproject.org/files/ENCFF027TJN/@@download/ENCFF027TJN.bed.gz GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF826PQU bigWig signal p-value ENCSR000EGF ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2AphosphoS2-human ENCAB000AOB DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF023NGN, ENCFF594OID, ENCFF630JRN 537956277 ENCODE Processing Pipeline 82f9f93710aeb2f1485581b529dd3991 https://www.encodeproject.org/files/ENCFF826PQU/@@download/ENCFF826PQU.bigWig GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF973ZSN bigWig fold change over control ENCSR000EGF ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2AphosphoS2-human ENCAB000AOB DNA see document see document False 2012-05-14 ENCODE 1 ENCFF023NGN, ENCFF630JRN 335838109 ENCODE Processing Pipeline db2f530cc185578e177307b3c9bcacd4 https://www.encodeproject.org/files/ENCFF973ZSN/@@download/ENCFF973ZSN.bigWig GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF222KTC bed narrowPeak peaks ENCSR000EGF ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2AphosphoS2-human ENCAB000AOB DNA see document see document False 2012-05-14 ENCODE 1 ENCFF023NGN, ENCFF630JRN 6957946 ENCODE Processing Pipeline dab330a66dafea71c26fa7a9169b6f25 https://www.encodeproject.org/files/ENCFF222KTC/@@download/ENCFF222KTC.bed.gz GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF446MMZ bed narrowPeak peaks ENCSR000EGF ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2AphosphoS2-human ENCAB000AOB DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF023NGN, ENCFF594OID, ENCFF630JRN 7123586 ENCODE Processing Pipeline 99818a4135c8d018548f641d18a19614 https://www.encodeproject.org/files/ENCFF446MMZ/@@download/ENCFF446MMZ.bed.gz GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF061FOD bigBed narrowPeak conservative idr thresholded peaks ENCSR000EGF ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2AphosphoS2-human ENCAB000AOB DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF027TJN 344649 ENCODE Processing Pipeline 9ecf339b0b65f7aa875bd8d3815148bc https://www.encodeproject.org/files/ENCFF061FOD/@@download/ENCFF061FOD.bigBed GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF410MHS bigWig fold change over control ENCSR000EGF ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2AphosphoS2-human ENCAB000AOB DNA see document see document False 2012-05-14 ENCODE 2 ENCFF023NGN, ENCFF594OID 327822863 ENCODE Processing Pipeline 6661f0741d7615dfaac30d4bc7d89f4e https://www.encodeproject.org/files/ENCFF410MHS/@@download/ENCFF410MHS.bigWig GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF137UHI bed narrowPeak peaks ENCSR000EGF ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2AphosphoS2-human ENCAB000AOB DNA see document see document False 2012-05-14 ENCODE 2 ENCFF023NGN, ENCFF594OID 7095140 ENCODE Processing Pipeline 051bb94191798cdef61c59e8c3e09a1c https://www.encodeproject.org/files/ENCFF137UHI/@@download/ENCFF137UHI.bed.gz GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF266OPF bed narrowPeak optimal idr thresholded peaks ENCSR000EGF ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2AphosphoS2-human ENCAB000AOB DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF137UHI, ENCFF222KTC, ENCFF419RSJ, ENCFF446MMZ 199055 ENCODE Processing Pipeline a30020977d8528dcc6f60d2d4c5abef4 https://www.encodeproject.org/files/ENCFF266OPF/@@download/ENCFF266OPF.bed.gz GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF310GHE bigWig signal p-value ENCSR000EGF ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2AphosphoS2-human ENCAB000AOB DNA see document see document False 2012-05-14 ENCODE 2 ENCFF023NGN, ENCFF594OID 477892415 ENCODE Processing Pipeline c94357b3122692d20cedc6065f01f25d https://www.encodeproject.org/files/ENCFF310GHE/@@download/ENCFF310GHE.bigWig GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF513FTL bam unfiltered alignments ENCSR632DCH ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ATF3-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1 100 ENCFF311SGU, ENCFF647KQT, ENCFF807MUK 6519718180 ENCODE Processing Pipeline 48a9dfeace238db3ed8c932908de3c6c https://www.encodeproject.org/files/ENCFF513FTL/@@download/ENCFF513FTL.bam hg19 released missing genetic modification characterization, mild to moderate bottlenecking, low read depth, moderate library complexity ENCFF218BQS bam unfiltered alignments ENCSR632DCH ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ATF3-human ENCAB728YTO DNA False 2016-08-24 ENCODE 2 100 ENCFF497JNW, ENCFF807MUK, ENCFF842CFV 4315756218 ENCODE Processing Pipeline 05ab44eadd7a838753da70d740f01099 https://www.encodeproject.org/files/ENCFF218BQS/@@download/ENCFF218BQS.bam hg19 released missing genetic modification characterization, mild to moderate bottlenecking, low read depth, moderate library complexity ENCFF647KQT fastq reads ENCSR632DCH ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ATF3-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1 1 100 paired-ended 1 ENCFF311SGU 3427957599 Michael Snyder, Stanford 5d1daef7b9628b1ab863256a80f6ee54 SRA:SRR5111965 https://www.encodeproject.org/files/ENCFF647KQT/@@download/ENCFF647KQT.fastq.gz Illumina HiSeq 2000 /files/ENCFF224SOH/, /files/ENCFF451VBV/ released missing genetic modification characterization, mild to moderate bottlenecking, low read depth, moderate library complexity ENCFF497JNW fastq reads ENCSR632DCH ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ATF3-human ENCAB728YTO DNA False 2016-08-24 ENCODE 2 1 100 paired-ended 1 ENCFF842CFV 2144210843 Michael Snyder, Stanford a940f16e740bcbc58dc4d0193b5a68c2 SRA:SRR5111964 https://www.encodeproject.org/files/ENCFF497JNW/@@download/ENCFF497JNW.fastq.gz Illumina HiSeq 2000 /files/ENCFF224SOH/, /files/ENCFF451VBV/ released missing genetic modification characterization, mild to moderate bottlenecking, low read depth, moderate library complexity ENCFF311SGU fastq reads ENCSR632DCH ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ATF3-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1 1 100 paired-ended 2 ENCFF647KQT 3571074922 Michael Snyder, Stanford 9d80f36e0b2feef46cb63d404fa420c7 SRA:SRR5111965 https://www.encodeproject.org/files/ENCFF311SGU/@@download/ENCFF311SGU.fastq.gz Illumina HiSeq 2000 /files/ENCFF224SOH/, /files/ENCFF451VBV/ released missing genetic modification characterization, mild to moderate bottlenecking, low read depth, moderate library complexity ENCFF842CFV fastq reads ENCSR632DCH ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ATF3-human ENCAB728YTO DNA False 2016-08-24 ENCODE 2 1 100 paired-ended 2 ENCFF497JNW 2204204749 Michael Snyder, Stanford bb91c59376108bf8a8aac0f81b6d6036 SRA:SRR5111964 https://www.encodeproject.org/files/ENCFF842CFV/@@download/ENCFF842CFV.fastq.gz Illumina HiSeq 2000 /files/ENCFF224SOH/, /files/ENCFF451VBV/ released missing genetic modification characterization, mild to moderate bottlenecking, low read depth, moderate library complexity ENCFF228QPG bam alignments ENCSR632DCH ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ATF3-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1 ENCFF311SGU, ENCFF647KQT, ENCFF807MUK 3546147050 ENCODE Processing Pipeline f2b0dc53fe26ea29c9afbb0e85148afa https://www.encodeproject.org/files/ENCFF228QPG/@@download/ENCFF228QPG.bam hg19 released missing genetic modification characterization, mild to moderate bottlenecking, low read depth, moderate library complexity ENCFF102OVJ bam alignments ENCSR632DCH ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ATF3-human ENCAB728YTO DNA False 2016-08-24 ENCODE 2 ENCFF497JNW, ENCFF807MUK, ENCFF842CFV 2951119985 ENCODE Processing Pipeline f31225be3421069ea94ed7b80a247634 https://www.encodeproject.org/files/ENCFF102OVJ/@@download/ENCFF102OVJ.bam hg19 released missing genetic modification characterization, mild to moderate bottlenecking, low read depth, moderate library complexity ENCFF315EIP bigWig fold change over control ENCSR632DCH ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ATF3-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1 ENCFF228QPG, ENCFF319TDX 858867888 ENCODE Processing Pipeline 50db1c42f72ff774e582ffe96352de71 https://www.encodeproject.org/files/ENCFF315EIP/@@download/ENCFF315EIP.bigWig hg19 released missing genetic modification characterization, mild to moderate bottlenecking, low read depth, moderate library complexity ENCFF184UAJ bigWig signal p-value ENCSR632DCH ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ATF3-human ENCAB728YTO DNA False 2016-08-24 ENCODE 2 ENCFF102OVJ, ENCFF319TDX 611130735 ENCODE Processing Pipeline d668c0d49adc41167e667233369e6ff9 https://www.encodeproject.org/files/ENCFF184UAJ/@@download/ENCFF184UAJ.bigWig hg19 released missing genetic modification characterization, mild to moderate bottlenecking, low read depth, moderate library complexity ENCFF874UJI bigWig signal p-value ENCSR632DCH ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ATF3-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1 ENCFF228QPG, ENCFF319TDX 848346209 ENCODE Processing Pipeline b0e340fef96306689ffeb260bea83598 https://www.encodeproject.org/files/ENCFF874UJI/@@download/ENCFF874UJI.bigWig hg19 released missing genetic modification characterization, mild to moderate bottlenecking, low read depth, moderate library complexity ENCFF281ART bed narrowPeak peaks ENCSR632DCH ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ATF3-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1 ENCFF228QPG, ENCFF319TDX 7026067 ENCODE Processing Pipeline 5490a96c5eee9cf6b27d1b2931a9ab2e https://www.encodeproject.org/files/ENCFF281ART/@@download/ENCFF281ART.bed.gz hg19 released missing genetic modification characterization, mild to moderate bottlenecking, low read depth, moderate library complexity ENCFF435TZX bed narrowPeak peaks ENCSR632DCH ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ATF3-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF102OVJ, ENCFF228QPG, ENCFF319TDX 7276549 ENCODE Processing Pipeline e0a6d3e9fb1237aa90a5a3577bbb95dd https://www.encodeproject.org/files/ENCFF435TZX/@@download/ENCFF435TZX.bed.gz hg19 released missing genetic modification characterization, mild to moderate bottlenecking, low read depth, moderate library complexity ENCFF102TIK bigWig fold change over control ENCSR632DCH ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ATF3-human ENCAB728YTO DNA False 2016-08-24 ENCODE 2 ENCFF102OVJ, ENCFF319TDX 732770692 ENCODE Processing Pipeline ada15b06f35f10f7f6982205d636dcbc https://www.encodeproject.org/files/ENCFF102TIK/@@download/ENCFF102TIK.bigWig hg19 released missing genetic modification characterization, mild to moderate bottlenecking, low read depth, moderate library complexity ENCFF175VPS bigWig fold change over control ENCSR632DCH ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ATF3-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF102OVJ, ENCFF228QPG, ENCFF319TDX 1182284809 ENCODE Processing Pipeline 7b7d596bef40ad6e76d715ea7af268b9 https://www.encodeproject.org/files/ENCFF175VPS/@@download/ENCFF175VPS.bigWig hg19 released missing genetic modification characterization, mild to moderate bottlenecking, low read depth, moderate library complexity ENCFF228PSB bed narrowPeak optimal idr thresholded peaks ENCSR632DCH ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ATF3-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF001TDO, ENCFF281ART, ENCFF303DKR, ENCFF435TZX 799671 ENCODE Processing Pipeline 054f28f450d6d4e35a9993fce120ae4c https://www.encodeproject.org/files/ENCFF228PSB/@@download/ENCFF228PSB.bed.gz hg19 released missing genetic modification characterization, mild to moderate bottlenecking, low read depth, moderate library complexity ENCFF817YQL bigBed narrowPeak optimal idr thresholded peaks ENCSR632DCH ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ATF3-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF228PSB 1764186 ENCODE Processing Pipeline 47b2b96adb42a7bfd22aca7c2d4e2d97 https://www.encodeproject.org/files/ENCFF817YQL/@@download/ENCFF817YQL.bigBed hg19 released missing genetic modification characterization, mild to moderate bottlenecking, low read depth, moderate library complexity ENCFF185HDZ bigWig signal p-value ENCSR632DCH ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ATF3-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF102OVJ, ENCFF228QPG, ENCFF319TDX 836357645 ENCODE Processing Pipeline 10081ff71ad4632d89ce871889b09dea https://www.encodeproject.org/files/ENCFF185HDZ/@@download/ENCFF185HDZ.bigWig hg19 released missing genetic modification characterization, mild to moderate bottlenecking, low read depth, moderate library complexity ENCFF556ULA bigBed narrowPeak peaks ENCSR632DCH ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ATF3-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF435TZX 13005686 ENCODE Processing Pipeline 01e8554bdf8026007c56753eb24e2d90 https://www.encodeproject.org/files/ENCFF556ULA/@@download/ENCFF556ULA.bigBed hg19 released missing genetic modification characterization, mild to moderate bottlenecking, low read depth, moderate library complexity ENCFF883RXL bigBed narrowPeak conservative idr thresholded peaks ENCSR632DCH ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ATF3-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF820BLL 1743347 ENCODE Processing Pipeline 878fd6d524d335696210bceebed79d13 https://www.encodeproject.org/files/ENCFF883RXL/@@download/ENCFF883RXL.bigBed hg19 released missing genetic modification characterization, mild to moderate bottlenecking, low read depth, moderate library complexity ENCFF303DKR bed narrowPeak peaks ENCSR632DCH ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ATF3-human ENCAB728YTO DNA False 2016-08-24 ENCODE 2 ENCFF102OVJ, ENCFF319TDX 6737397 ENCODE Processing Pipeline f3f8b4ff33716b5a73ff5585e6f524b9 https://www.encodeproject.org/files/ENCFF303DKR/@@download/ENCFF303DKR.bed.gz hg19 released missing genetic modification characterization, mild to moderate bottlenecking, low read depth, moderate library complexity ENCFF820BLL bed narrowPeak conservative idr thresholded peaks ENCSR632DCH ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ATF3-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF001TDO, ENCFF281ART, ENCFF303DKR, ENCFF435TZX 792908 ENCODE Processing Pipeline 98698eff66ac0dfe6cd233f833c610fb https://www.encodeproject.org/files/ENCFF820BLL/@@download/ENCFF820BLL.bed.gz hg19 released missing genetic modification characterization, mild to moderate bottlenecking, low read depth, moderate library complexity ENCFF638XGI bigBed narrowPeak peaks ENCSR632DCH ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ATF3-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1 ENCFF281ART 12941666 ENCODE Processing Pipeline 8bfc37a16994bd233bd6afbe45ebb406 https://www.encodeproject.org/files/ENCFF638XGI/@@download/ENCFF638XGI.bigBed hg19 released missing genetic modification characterization, mild to moderate bottlenecking, low read depth, moderate library complexity ENCFF992ZDG bigBed narrowPeak peaks ENCSR632DCH ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ATF3-human ENCAB728YTO DNA False 2016-08-24 ENCODE 2 ENCFF303DKR 13193183 ENCODE Processing Pipeline 3e9b8239f89d4b2d7ee7ae667f4bd519 https://www.encodeproject.org/files/ENCFF992ZDG/@@download/ENCFF992ZDG.bigBed hg19 released missing genetic modification characterization, mild to moderate bottlenecking, low read depth, moderate library complexity ENCFF192UGS bam unfiltered alignments ENCSR632DCH ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ATF3-human ENCAB728YTO DNA False 2016-08-24 ENCODE 2 100 ENCFF497JNW, ENCFF643CGH, ENCFF842CFV 4317691503 ENCODE Processing Pipeline b7ec315ce81c8e9be5c7e8658ff059c9 https://www.encodeproject.org/files/ENCFF192UGS/@@download/ENCFF192UGS.bam GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking, low read depth, moderate library complexity ENCFF631UIG bam unfiltered alignments ENCSR632DCH ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ATF3-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1 100 ENCFF311SGU, ENCFF643CGH, ENCFF647KQT 6519152362 ENCODE Processing Pipeline 22bd892c067c27b004be3a453408915e https://www.encodeproject.org/files/ENCFF631UIG/@@download/ENCFF631UIG.bam GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking, low read depth, moderate library complexity ENCFF938FQC bam alignments ENCSR632DCH ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ATF3-human ENCAB728YTO DNA False 2016-08-24 ENCODE 2 100 ENCFF497JNW, ENCFF643CGH, ENCFF842CFV 2952154493 ENCODE Processing Pipeline b3f5828305f72d5a0bf313bc402978ef https://www.encodeproject.org/files/ENCFF938FQC/@@download/ENCFF938FQC.bam GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking, low read depth, moderate library complexity ENCFF327XSI bam alignments ENCSR632DCH ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ATF3-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1 100 ENCFF311SGU, ENCFF643CGH, ENCFF647KQT 3547651072 ENCODE Processing Pipeline 4aeb2bba2f62dfbdba6339f83e7c98b3 https://www.encodeproject.org/files/ENCFF327XSI/@@download/ENCFF327XSI.bam GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking, low read depth, moderate library complexity ENCFF742PWS bigWig signal p-value ENCSR632DCH ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ATF3-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1 ENCFF327XSI, ENCFF394JQH 839814285 ENCODE Processing Pipeline 5ede2b4633230244198648b86b7afff2 https://www.encodeproject.org/files/ENCFF742PWS/@@download/ENCFF742PWS.bigWig GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking, low read depth, moderate library complexity ENCFF946HUI bigWig signal p-value ENCSR632DCH ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ATF3-human ENCAB728YTO DNA False 2016-08-24 ENCODE 2 ENCFF394JQH, ENCFF938FQC 686129407 ENCODE Processing Pipeline 3352e25cf06e8ac800b74c125ae23e5c https://www.encodeproject.org/files/ENCFF946HUI/@@download/ENCFF946HUI.bigWig GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking, low read depth, moderate library complexity ENCFF587RUL bigWig signal p-value ENCSR632DCH ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ATF3-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF327XSI, ENCFF394JQH, ENCFF938FQC 840693060 ENCODE Processing Pipeline 7653ec8df6295f5f9bc8139835bc2663 https://www.encodeproject.org/files/ENCFF587RUL/@@download/ENCFF587RUL.bigWig GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking, low read depth, moderate library complexity ENCFF756NHY bigWig fold change over control ENCSR632DCH ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ATF3-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1 ENCFF327XSI, ENCFF394JQH 855639823 ENCODE Processing Pipeline a118fcdfd66b07d164b92683cc9eb17d https://www.encodeproject.org/files/ENCFF756NHY/@@download/ENCFF756NHY.bigWig GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking, low read depth, moderate library complexity ENCFF631QGM bigWig fold change over control ENCSR632DCH ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ATF3-human ENCAB728YTO DNA False 2016-08-24 ENCODE 2 ENCFF394JQH, ENCFF938FQC 733844601 ENCODE Processing Pipeline dc7c5eef6856b1dcdb558d784c82abc4 https://www.encodeproject.org/files/ENCFF631QGM/@@download/ENCFF631QGM.bigWig GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking, low read depth, moderate library complexity ENCFF894JDF bed narrowPeak peaks ENCSR632DCH ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ATF3-human ENCAB728YTO DNA False 2016-08-24 ENCODE 2 ENCFF394JQH, ENCFF938FQC 6659004 ENCODE Processing Pipeline af0b364522bac11653f5e232ec27a7d6 https://www.encodeproject.org/files/ENCFF894JDF/@@download/ENCFF894JDF.bed.gz GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking, low read depth, moderate library complexity ENCFF265AHI bed narrowPeak peaks ENCSR632DCH ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ATF3-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF327XSI, ENCFF394JQH, ENCFF938FQC 7216997 ENCODE Processing Pipeline 9bfdb9e00388daacc7d9330060983115 https://www.encodeproject.org/files/ENCFF265AHI/@@download/ENCFF265AHI.bed.gz GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking, low read depth, moderate library complexity ENCFF021ELR bigWig fold change over control ENCSR632DCH ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ATF3-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF327XSI, ENCFF394JQH, ENCFF938FQC 1223224453 ENCODE Processing Pipeline b759280c91b70cddfe9184494ac913d2 https://www.encodeproject.org/files/ENCFF021ELR/@@download/ENCFF021ELR.bigWig GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking, low read depth, moderate library complexity ENCFF447IHS bigBed narrowPeak peaks ENCSR632DCH ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ATF3-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1 ENCFF492ZNK 12924603 ENCODE Processing Pipeline 2ad3a565036b2920f90bf327451ff8cd https://www.encodeproject.org/files/ENCFF447IHS/@@download/ENCFF447IHS.bigBed GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking, low read depth, moderate library complexity ENCFF321TZS bigBed narrowPeak conservative idr thresholded peaks ENCSR632DCH ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ATF3-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF605TNJ 1735196 ENCODE Processing Pipeline a0c5a1c1b5e90a3db9727179a0f99647 https://www.encodeproject.org/files/ENCFF321TZS/@@download/ENCFF321TZS.bigBed GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking, low read depth, moderate library complexity ENCFF711DLC bigBed narrowPeak peaks ENCSR632DCH ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ATF3-human ENCAB728YTO DNA False 2016-08-24 ENCODE 2 ENCFF894JDF 13233880 ENCODE Processing Pipeline f3f067ca246682a324658c587b1c0c9d https://www.encodeproject.org/files/ENCFF711DLC/@@download/ENCFF711DLC.bigBed GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking, low read depth, moderate library complexity ENCFF492ZNK bed narrowPeak peaks ENCSR632DCH ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ATF3-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1 ENCFF327XSI, ENCFF394JQH 6947208 ENCODE Processing Pipeline 39ee85589bc2498b59bd34e10c3e0d93 https://www.encodeproject.org/files/ENCFF492ZNK/@@download/ENCFF492ZNK.bed.gz GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking, low read depth, moderate library complexity ENCFF419WTZ bed narrowPeak optimal idr thresholded peaks ENCSR632DCH ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ATF3-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF265AHI, ENCFF419RSJ, ENCFF492ZNK, ENCFF894JDF 795933 ENCODE Processing Pipeline db80ad0dec4830532fc99a3350ab1b37 https://www.encodeproject.org/files/ENCFF419WTZ/@@download/ENCFF419WTZ.bed.gz GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking, low read depth, moderate library complexity ENCFF680EQH bigBed narrowPeak optimal idr thresholded peaks ENCSR632DCH ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ATF3-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF419WTZ 1423588 ENCODE Processing Pipeline 0fabff031d0a2f851411d922ed6f54ac https://www.encodeproject.org/files/ENCFF680EQH/@@download/ENCFF680EQH.bigBed GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking, low read depth, moderate library complexity ENCFF742CLG bigBed narrowPeak peaks ENCSR632DCH ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ATF3-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF265AHI 12984300 ENCODE Processing Pipeline 3ed5eec29281ea9dac4c8e941e8173fc https://www.encodeproject.org/files/ENCFF742CLG/@@download/ENCFF742CLG.bigBed GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking, low read depth, moderate library complexity ENCFF605TNJ bed narrowPeak conservative idr thresholded peaks ENCSR632DCH ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ATF3-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF265AHI, ENCFF419RSJ, ENCFF492ZNK, ENCFF894JDF 784161 ENCODE Processing Pipeline ed5636e4b4934f3ba5a5caf3db0b27ec https://www.encodeproject.org/files/ENCFF605TNJ/@@download/ENCFF605TNJ.bed.gz GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking, low read depth, moderate library complexity ENCFF001HTC bam alignments ENCSR000DWE ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCF-human ENCAB000AFP DNA see document see document False 2011-03-17 ENCODE 1 ENCFF001HTO 707533446 John Stamatoyannopoulos, UW 47b33c89d7dcc58067550c7c28796794 https://www.encodeproject.org/files/ENCFF001HTC/@@download/ENCFF001HTC.bam hg19 released control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, low read length poor library complexity, insufficient read depth, severe bottlenecking ENCFF001HTD bam alignments ENCSR000DWE ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCF-human ENCAB000AFP DNA see document see document False 2011-03-17 ENCODE 2 ENCFF001HTP 502580289 John Stamatoyannopoulos, UW 104368a2b940985778cd70e72a83005a https://www.encodeproject.org/files/ENCFF001HTD/@@download/ENCFF001HTD.bam hg19 released control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, low read length poor library complexity, insufficient read depth, severe bottlenecking ENCFF001HTE bigBed broadPeak hotspots ENCSR000DWE ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCF-human ENCAB000AFP DNA see document see document False 2011-03-17 ENCODE 1 ENCFF001XSR 5651862 John Stamatoyannopoulos, UW 2eb564cf9e3309f0311e47b38b98a082 https://www.encodeproject.org/files/ENCFF001HTE/@@download/ENCFF001HTE.bigBed hg19 released control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, low read length poor library complexity, insufficient read depth, severe bottlenecking ENCFF001HTF bigBed broadPeak hotspots ENCSR000DWE ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCF-human ENCAB000AFP DNA see document see document False 2011-03-17 ENCODE 2 ENCFF001XSS 3100913 John Stamatoyannopoulos, UW 39cdec2c6cc7939150e5de662c8edac1 https://www.encodeproject.org/files/ENCFF001HTF/@@download/ENCFF001HTF.bigBed hg19 released control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, low read length poor library complexity, insufficient read depth, severe bottlenecking ENCFF001HTG bigBed narrowPeak peaks ENCSR000DWE ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCF-human ENCAB000AFP DNA see document see document False 2011-03-17 ENCODE 1 ENCFF001XST 1439192 John Stamatoyannopoulos, UW c4bcead14458eaa870b1449037663667 https://www.encodeproject.org/files/ENCFF001HTG/@@download/ENCFF001HTG.bigBed hg19 released control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, low read length poor library complexity, insufficient read depth, severe bottlenecking ENCFF001HTH bigBed narrowPeak peaks ENCSR000DWE ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCF-human ENCAB000AFP DNA see document see document False 2011-03-17 ENCODE 2 ENCFF001XSU 879193 John Stamatoyannopoulos, UW 69917f58e3a976b39adb6913133be503 https://www.encodeproject.org/files/ENCFF001HTH/@@download/ENCFF001HTH.bigBed hg19 released control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, low read length poor library complexity, insufficient read depth, severe bottlenecking ENCFF001HTI bigWig raw signal ENCSR000DWE ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCF-human ENCAB000AFP DNA see document see document False 2011-03-17 ENCODE 1 ENCFF001HTC 134296008 John Stamatoyannopoulos, UW 0290f47c68f51e4cfb256fb752cf3859 https://www.encodeproject.org/files/ENCFF001HTI/@@download/ENCFF001HTI.bigWig hg19 released control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, low read length poor library complexity, insufficient read depth, severe bottlenecking ENCFF001HTL bigWig raw signal ENCSR000DWE ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCF-human ENCAB000AFP DNA see document see document False 2011-03-17 ENCODE 2 ENCFF001HTD 76946508 John Stamatoyannopoulos, UW 808fadd7b9494f469cd3c780fab77ee4 https://www.encodeproject.org/files/ENCFF001HTL/@@download/ENCFF001HTL.bigWig hg19 released control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, low read length poor library complexity, insufficient read depth, severe bottlenecking ENCFF001HTO fastq reads ENCSR000DWE ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCF-human ENCAB000AFP DNA see document see document False 2011-03-17 ENCODE 1 1 36 single-ended 1155905057 John Stamatoyannopoulos, UW b4f01922bbbc3dbfc3687bac5c097752 https://www.encodeproject.org/files/ENCFF001HTO/@@download/ENCFF001HTO.fastq.gz Illumina Genome Analyzer II /files/ENCFF001HTT/ released control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, low read length poor library complexity, insufficient read depth, severe bottlenecking ENCFF001HTP fastq reads ENCSR000DWE ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCF-human ENCAB000AFP DNA see document see document False 2011-03-17 ENCODE 2 1 36 single-ended 954274346 John Stamatoyannopoulos, UW a3b5eb7e3dd8bd0854b2cda6453a3859 https://www.encodeproject.org/files/ENCFF001HTP/@@download/ENCFF001HTP.fastq.gz Illumina Genome Analyzer II /files/ENCFF001HTT/ released control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, low read length poor library complexity, insufficient read depth, severe bottlenecking ENCFF001XSR bed broadPeak hotspots ENCSR000DWE ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCF-human ENCAB000AFP DNA see document see document False 2011-03-17 ENCODE 1 ENCFF001HTC 3331643 John Stamatoyannopoulos, UW 0f3c15c9399e988b5b4e44a1c6d84cae https://www.encodeproject.org/files/ENCFF001XSR/@@download/ENCFF001XSR.bed.gz hg19 released control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, low read length poor library complexity, insufficient read depth, severe bottlenecking ENCFF001XSS bed broadPeak hotspots ENCSR000DWE ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCF-human ENCAB000AFP DNA see document see document False 2011-03-17 ENCODE 2 ENCFF001HTD 2204855 John Stamatoyannopoulos, UW cf9e9cf3566b5a1e00c40cd0e5cc2d25 https://www.encodeproject.org/files/ENCFF001XSS/@@download/ENCFF001XSS.bed.gz hg19 released control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, low read length poor library complexity, insufficient read depth, severe bottlenecking ENCFF001XST bed narrowPeak peaks ENCSR000DWE ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCF-human ENCAB000AFP DNA see document see document False 2011-03-17 ENCODE 1 ENCFF001HTC 862203 John Stamatoyannopoulos, UW e8332ac71efe7497fe88b557ce628c9c https://www.encodeproject.org/files/ENCFF001XST/@@download/ENCFF001XST.bed.gz hg19 released control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, low read length poor library complexity, insufficient read depth, severe bottlenecking ENCFF001XSU bed narrowPeak peaks ENCSR000DWE ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCF-human ENCAB000AFP DNA see document see document False 2011-03-17 ENCODE 2 ENCFF001HTD 601656 John Stamatoyannopoulos, UW ac9eb0f49655b416b767f25be87d0f8b https://www.encodeproject.org/files/ENCFF001XSU/@@download/ENCFF001XSU.bed.gz hg19 released control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, low read length poor library complexity, insufficient read depth, severe bottlenecking ENCFF002DDJ bed narrowPeak optimal idr thresholded peaks ENCSR000DWE ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCF-human ENCAB000AFP DNA see document see document False 2011-03-17 ENCODE 1, 2 ENCFF001HTC, ENCFF001HTD 869756 ENCODE Consortium Analysis Working Group 8e9f23cdfc27292f8fc0f0b302cd296a https://www.encodeproject.org/files/ENCFF002DDJ/@@download/ENCFF002DDJ.bed.gz hg19 released control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, low read length poor library complexity, insufficient read depth, severe bottlenecking ENCFF395TEX bigBed narrowPeak optimal idr thresholded peaks ENCSR000DWE ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCF-human ENCAB000AFP DNA see document see document False 2011-03-17 ENCODE 1, 2 ENCFF002DDJ 1798726 ENCODE Consortium 77e330390d944ea154ac2aeea69c4ebf https://www.encodeproject.org/files/ENCFF395TEX/@@download/ENCFF395TEX.bigBed hg19 released control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, low read length poor library complexity, insufficient read depth, severe bottlenecking ENCFF194JHV bam unfiltered alignments ENCSR000DWE ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCF-human ENCAB000AFP DNA see document see document False 2011-03-17 ENCODE 2 ENCFF001HTP, ENCFF643CGH 949180423 ENCODE Processing Pipeline c841d6c1913cc1ff2b39c64b4d2f8bb1 https://www.encodeproject.org/files/ENCFF194JHV/@@download/ENCFF194JHV.bam GRCh38 released control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, low read length poor library complexity, insufficient read depth, severe bottlenecking ENCFF081HVQ bam alignments ENCSR000DWE ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCF-human ENCAB000AFP DNA see document see document False 2011-03-17 ENCODE 1 36 ENCFF001HTO, ENCFF643CGH 597731784 ENCODE Processing Pipeline 07f9ceb669ce1bbfed2f9297f1efd4c1 https://www.encodeproject.org/files/ENCFF081HVQ/@@download/ENCFF081HVQ.bam GRCh38 released control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, low read length poor library complexity, insufficient read depth, severe bottlenecking ENCFF494VZW bam alignments ENCSR000DWE ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCF-human ENCAB000AFP DNA see document see document False 2011-03-17 ENCODE 2 36 ENCFF001HTP, ENCFF643CGH 249557976 ENCODE Processing Pipeline aed92b2a66e0bf7405ea28c2af55d38d https://www.encodeproject.org/files/ENCFF494VZW/@@download/ENCFF494VZW.bam GRCh38 released control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, low read length poor library complexity, insufficient read depth, severe bottlenecking ENCFF083YOH bam unfiltered alignments ENCSR000DWE ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCF-human ENCAB000AFP DNA see document see document False 2011-03-17 ENCODE 1 ENCFF001HTO, ENCFF643CGH 1243865556 ENCODE Processing Pipeline 0dcc149063933b0e6b5f204d40350834 https://www.encodeproject.org/files/ENCFF083YOH/@@download/ENCFF083YOH.bam GRCh38 released control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, low read length poor library complexity, insufficient read depth, severe bottlenecking ENCFF133LFA bigWig signal p-value ENCSR000DWE ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCF-human ENCAB000AFP DNA see document see document False 2011-03-17 ENCODE 1 ENCFF081HVQ, ENCFF873PSH 279714575 ENCODE Processing Pipeline 76fb016c5df1424a2269f1d7b6bd2297 https://www.encodeproject.org/files/ENCFF133LFA/@@download/ENCFF133LFA.bigWig GRCh38 released control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, low read length poor library complexity, insufficient read depth, severe bottlenecking ENCFF675GVW bigWig fold change over control ENCSR000DWE ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCF-human ENCAB000AFP DNA see document see document False 2011-03-17 ENCODE 1, 2 ENCFF081HVQ, ENCFF494VZW, ENCFF873PSH 297953148 ENCODE Processing Pipeline bbba77a6e169b37667624fe6080e1d5b https://www.encodeproject.org/files/ENCFF675GVW/@@download/ENCFF675GVW.bigWig GRCh38 released control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, low read length poor library complexity, insufficient read depth, severe bottlenecking ENCFF822RTP bigWig fold change over control ENCSR000DWE ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCF-human ENCAB000AFP DNA see document see document False 2011-03-17 ENCODE 1 ENCFF081HVQ, ENCFF873PSH 220555415 ENCODE Processing Pipeline 3bf583f8d44bd1c3ae2d18371a2dc9e7 https://www.encodeproject.org/files/ENCFF822RTP/@@download/ENCFF822RTP.bigWig GRCh38 released control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, low read length poor library complexity, insufficient read depth, severe bottlenecking ENCFF963FRG bigBed narrowPeak peaks ENCSR000DWE ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCF-human ENCAB000AFP DNA see document see document False 2011-03-17 ENCODE 2 ENCFF016NHU 5559082 ENCODE Processing Pipeline 39d37ef9d2ef99a9c21bebf08e755ef3 https://www.encodeproject.org/files/ENCFF963FRG/@@download/ENCFF963FRG.bigBed GRCh38 released control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, low read length poor library complexity, insufficient read depth, severe bottlenecking ENCFF769QYS bigWig signal p-value ENCSR000DWE ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCF-human ENCAB000AFP DNA see document see document False 2011-03-17 ENCODE 2 ENCFF494VZW, ENCFF873PSH 240427713 ENCODE Processing Pipeline e6b4722f667e2b93996e0bae3f3f1518 https://www.encodeproject.org/files/ENCFF769QYS/@@download/ENCFF769QYS.bigWig GRCh38 released control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, low read length poor library complexity, insufficient read depth, severe bottlenecking ENCFF221XPQ bigWig signal p-value ENCSR000DWE ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCF-human ENCAB000AFP DNA see document see document False 2011-03-17 ENCODE 1, 2 ENCFF081HVQ, ENCFF494VZW, ENCFF873PSH 317717550 ENCODE Processing Pipeline b020094591eeeca27477ade4af49b5fa https://www.encodeproject.org/files/ENCFF221XPQ/@@download/ENCFF221XPQ.bigWig GRCh38 released control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, low read length poor library complexity, insufficient read depth, severe bottlenecking ENCFF248VAH bed narrowPeak peaks ENCSR000DWE ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCF-human ENCAB000AFP DNA see document see document False 2011-03-17 ENCODE 1 ENCFF081HVQ, ENCFF873PSH 4106246 ENCODE Processing Pipeline 4836dbceb7f74afa2326b6f2eff23889 https://www.encodeproject.org/files/ENCFF248VAH/@@download/ENCFF248VAH.bed.gz GRCh38 released control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, low read length poor library complexity, insufficient read depth, severe bottlenecking ENCFF075EWP bed narrowPeak peaks ENCSR000DWE ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCF-human ENCAB000AFP DNA see document see document False 2011-03-17 ENCODE 1, 2 ENCFF081HVQ, ENCFF494VZW, ENCFF873PSH 4464865 ENCODE Processing Pipeline b8db5b9fc22c7a7e92462c324c336ed6 https://www.encodeproject.org/files/ENCFF075EWP/@@download/ENCFF075EWP.bed.gz GRCh38 released control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, low read length poor library complexity, insufficient read depth, severe bottlenecking ENCFF228PMT bigBed narrowPeak optimal idr thresholded peaks ENCSR000DWE ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCF-human ENCAB000AFP DNA see document see document False 2011-03-17 ENCODE 1, 2 ENCFF843VHC 1228936 ENCODE Processing Pipeline 38fcf88a696eac4655b388f65830c0ca https://www.encodeproject.org/files/ENCFF228PMT/@@download/ENCFF228PMT.bigBed GRCh38 released control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, low read length poor library complexity, insufficient read depth, severe bottlenecking ENCFF446KLG bigWig fold change over control ENCSR000DWE ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCF-human ENCAB000AFP DNA see document see document False 2011-03-17 ENCODE 2 ENCFF494VZW, ENCFF873PSH 109323484 ENCODE Processing Pipeline 090a8ea86a10f65586bb1d1ffbf07ba0 https://www.encodeproject.org/files/ENCFF446KLG/@@download/ENCFF446KLG.bigWig GRCh38 released control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, low read length poor library complexity, insufficient read depth, severe bottlenecking ENCFF016NHU bed narrowPeak peaks ENCSR000DWE ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCF-human ENCAB000AFP DNA see document see document False 2011-03-17 ENCODE 2 ENCFF494VZW, ENCFF873PSH 2729967 ENCODE Processing Pipeline cb4a3bfb3a222713f2274869d9bb937f https://www.encodeproject.org/files/ENCFF016NHU/@@download/ENCFF016NHU.bed.gz GRCh38 released control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, low read length poor library complexity, insufficient read depth, severe bottlenecking ENCFF636XQY bigBed narrowPeak peaks ENCSR000DWE ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCF-human ENCAB000AFP DNA see document see document False 2011-03-17 ENCODE 1 ENCFF248VAH 10046531 ENCODE Processing Pipeline b5e788f7b5dc44e2f203429965c6d17d https://www.encodeproject.org/files/ENCFF636XQY/@@download/ENCFF636XQY.bigBed GRCh38 released control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, low read length poor library complexity, insufficient read depth, severe bottlenecking ENCFF832NML bigBed narrowPeak conservative idr thresholded peaks ENCSR000DWE ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCF-human ENCAB000AFP DNA see document see document False 2011-03-17 ENCODE 1, 2 ENCFF389ELU 1130535 ENCODE Processing Pipeline f30e84f10ac85b3889541e039aa4bfd6 https://www.encodeproject.org/files/ENCFF832NML/@@download/ENCFF832NML.bigBed GRCh38 released control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, low read length poor library complexity, insufficient read depth, severe bottlenecking ENCFF682XBS bigBed narrowPeak peaks ENCSR000DWE ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCF-human ENCAB000AFP DNA see document see document False 2011-03-17 ENCODE 1, 2 ENCFF075EWP 10642680 ENCODE Processing Pipeline 387ed098f97a8f4b7cd264d5acf357dc https://www.encodeproject.org/files/ENCFF682XBS/@@download/ENCFF682XBS.bigBed GRCh38 released control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, low read length poor library complexity, insufficient read depth, severe bottlenecking ENCFF389ELU bed narrowPeak conservative idr thresholded peaks ENCSR000DWE ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCF-human ENCAB000AFP DNA see document see document False 2011-03-17 ENCODE 1, 2 ENCFF016NHU, ENCFF075EWP, ENCFF248VAH, ENCFF419RSJ 625017 ENCODE Processing Pipeline eab4a62407ecb1f4025aeed2f8011c85 https://www.encodeproject.org/files/ENCFF389ELU/@@download/ENCFF389ELU.bed.gz GRCh38 released control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, low read length poor library complexity, insufficient read depth, severe bottlenecking ENCFF843VHC bed narrowPeak optimal idr thresholded peaks ENCSR000DWE ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCF-human ENCAB000AFP DNA see document see document False 2011-03-17 ENCODE 1, 2 ENCFF016NHU, ENCFF075EWP, ENCFF248VAH, ENCFF419RSJ 702428 ENCODE Processing Pipeline 58222b6f11836bebf802919942dd9933 https://www.encodeproject.org/files/ENCFF843VHC/@@download/ENCFF843VHC.bed.gz GRCh38 released control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, low read length poor library complexity, insufficient read depth, severe bottlenecking ENCFF925UZZ fastq reads ENCSR506KWJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens XRCC5-human ENCAB308AOH DNA SDS formaldehyde False 2017-12-01 ENCODE 1 1 40 single-ended 1221762826 Xiang-Dong Fu, UCSD 3ebc60b8f49380a86bb095ae7689769a https://www.encodeproject.org/files/ENCFF925UZZ/@@download/ENCFF925UZZ.fastq.gz Illumina HiSeq 2000 /files/ENCFF331RXU/ released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO partially characterized antibody ENCFF539TVP fastq reads ENCSR506KWJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens XRCC5-human ENCAB308AOH DNA SDS formaldehyde False 2017-12-01 ENCODE 2 1 40 single-ended 1005475039 Xiang-Dong Fu, UCSD 4efe762399ef2414747faeefb52ac73f https://www.encodeproject.org/files/ENCFF539TVP/@@download/ENCFF539TVP.fastq.gz Illumina HiSeq 2000 /files/ENCFF318ZTK/ released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO partially characterized antibody ENCFF281SDB bam alignments ENCSR506KWJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens XRCC5-human ENCAB308AOH DNA SDS formaldehyde False 2017-12-01 ENCODE 2 40 ENCFF539TVP, ENCFF807MUK 700726692 ENCODE Processing Pipeline cebf5813192f489e6f1685848670f484 https://www.encodeproject.org/files/ENCFF281SDB/@@download/ENCFF281SDB.bam hg19 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO partially characterized antibody ENCFF667KBF bam alignments ENCSR506KWJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens XRCC5-human ENCAB308AOH DNA SDS formaldehyde False 2017-12-01 ENCODE 1 40 ENCFF807MUK, ENCFF925UZZ 875727844 ENCODE Processing Pipeline df12c540236f6131ce71b5a7418f66f8 https://www.encodeproject.org/files/ENCFF667KBF/@@download/ENCFF667KBF.bam hg19 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO partially characterized antibody ENCFF928GGP bigWig signal p-value ENCSR506KWJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens XRCC5-human ENCAB308AOH DNA SDS formaldehyde False 2017-12-01 ENCODE 1 ENCFF350QUB, ENCFF667KBF 857056506 ENCODE Processing Pipeline 68fc93a2a5b86d246f5f8c133fdefcc1 https://www.encodeproject.org/files/ENCFF928GGP/@@download/ENCFF928GGP.bigWig hg19 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO partially characterized antibody ENCFF618QKD bigWig signal p-value ENCSR506KWJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens XRCC5-human ENCAB308AOH DNA SDS formaldehyde False 2017-12-01 ENCODE 2 ENCFF281SDB, ENCFF466QHR 754470286 ENCODE Processing Pipeline 92bf5d0f72077d546c2731bca8542192 https://www.encodeproject.org/files/ENCFF618QKD/@@download/ENCFF618QKD.bigWig hg19 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO partially characterized antibody ENCFF982OSU bigWig fold change over control ENCSR506KWJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens XRCC5-human ENCAB308AOH DNA SDS formaldehyde False 2017-12-01 ENCODE 2 ENCFF281SDB, ENCFF466QHR 509016998 ENCODE Processing Pipeline c970e9e4e5513cf8df7916d0fa9fc7d5 https://www.encodeproject.org/files/ENCFF982OSU/@@download/ENCFF982OSU.bigWig hg19 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO partially characterized antibody ENCFF751CTB bigWig fold change over control ENCSR506KWJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens XRCC5-human ENCAB308AOH DNA SDS formaldehyde False 2017-12-01 ENCODE 1 ENCFF350QUB, ENCFF667KBF 557738731 ENCODE Processing Pipeline ce40a9f399ad681ff4df4b7ee910c275 https://www.encodeproject.org/files/ENCFF751CTB/@@download/ENCFF751CTB.bigWig hg19 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO partially characterized antibody ENCFF929NEA bigWig signal p-value ENCSR506KWJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens XRCC5-human ENCAB308AOH DNA SDS formaldehyde False 2017-12-01 ENCODE 1, 2 ENCFF281SDB, ENCFF350QUB, ENCFF466QHR, ENCFF667KBF 1426567941 ENCODE Processing Pipeline 566530554bafcb38bc32a0229713bddf https://www.encodeproject.org/files/ENCFF929NEA/@@download/ENCFF929NEA.bigWig hg19 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO partially characterized antibody ENCFF755KRH bed narrowPeak peaks ENCSR506KWJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens XRCC5-human ENCAB308AOH DNA SDS formaldehyde False 2017-12-01 ENCODE 1 ENCFF350QUB, ENCFF667KBF 6487370 ENCODE Processing Pipeline a216a4a8a142f90b0aee3a2415f9346d https://www.encodeproject.org/files/ENCFF755KRH/@@download/ENCFF755KRH.bed.gz hg19 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO partially characterized antibody ENCFF149RRS bigBed narrowPeak peaks ENCSR506KWJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens XRCC5-human ENCAB308AOH DNA SDS formaldehyde False 2017-12-01 ENCODE 1 ENCFF755KRH 13129060 ENCODE Processing Pipeline 1ab8ca56015a0be75431067f3912a92f https://www.encodeproject.org/files/ENCFF149RRS/@@download/ENCFF149RRS.bigBed hg19 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO partially characterized antibody ENCFF245CYX bed narrowPeak peaks ENCSR506KWJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens XRCC5-human ENCAB308AOH DNA SDS formaldehyde False 2017-12-01 ENCODE 1, 2 ENCFF281SDB, ENCFF350QUB, ENCFF466QHR, ENCFF667KBF 7138726 ENCODE Processing Pipeline 4a324123598ab014cc6c682fb87eb805 https://www.encodeproject.org/files/ENCFF245CYX/@@download/ENCFF245CYX.bed.gz hg19 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO partially characterized antibody ENCFF285YMS bigBed narrowPeak peaks ENCSR506KWJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens XRCC5-human ENCAB308AOH DNA SDS formaldehyde False 2017-12-01 ENCODE 1, 2 ENCFF245CYX 12895365 ENCODE Processing Pipeline 6ff8f19c8438fa4f28edadcbbc704a38 https://www.encodeproject.org/files/ENCFF285YMS/@@download/ENCFF285YMS.bigBed hg19 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO partially characterized antibody ENCFF753TWJ bigWig fold change over control ENCSR506KWJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens XRCC5-human ENCAB308AOH DNA SDS formaldehyde False 2017-12-01 ENCODE 1, 2 ENCFF281SDB, ENCFF350QUB, ENCFF466QHR, ENCFF667KBF 1221850812 ENCODE Processing Pipeline 19665c7a1d44f9ceb2278169263ad27f https://www.encodeproject.org/files/ENCFF753TWJ/@@download/ENCFF753TWJ.bigWig hg19 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO partially characterized antibody ENCFF720UBT bed narrowPeak peaks ENCSR506KWJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens XRCC5-human ENCAB308AOH DNA SDS formaldehyde False 2017-12-01 ENCODE 2 ENCFF281SDB, ENCFF466QHR 6492687 ENCODE Processing Pipeline 8a2ad4ae6798b44d209bbe594a30b80e https://www.encodeproject.org/files/ENCFF720UBT/@@download/ENCFF720UBT.bed.gz hg19 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO partially characterized antibody ENCFF726OAO bigBed narrowPeak peaks ENCSR506KWJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens XRCC5-human ENCAB308AOH DNA SDS formaldehyde False 2017-12-01 ENCODE 2 ENCFF720UBT 13012850 ENCODE Processing Pipeline 511238865d94da3974b86a1969402a1a https://www.encodeproject.org/files/ENCFF726OAO/@@download/ENCFF726OAO.bigBed hg19 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO partially characterized antibody ENCFF099SPM bam unfiltered alignments ENCSR506KWJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens XRCC5-human ENCAB308AOH DNA SDS formaldehyde False 2017-12-01 ENCODE 1 ENCFF643CGH, ENCFF925UZZ 1679390477 ENCODE Processing Pipeline e16a119c516b1faaf6ec76d22954fd00 https://www.encodeproject.org/files/ENCFF099SPM/@@download/ENCFF099SPM.bam GRCh38 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO partially characterized antibody ENCFF250ASK bam unfiltered alignments ENCSR506KWJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens XRCC5-human ENCAB308AOH DNA SDS formaldehyde False 2017-12-01 ENCODE 2 ENCFF539TVP, ENCFF643CGH 1376631830 ENCODE Processing Pipeline bb1a88d84fe7d5998e2ce518ee8631d4 https://www.encodeproject.org/files/ENCFF250ASK/@@download/ENCFF250ASK.bam GRCh38 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO partially characterized antibody ENCFF991WOD bam alignments ENCSR506KWJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens XRCC5-human ENCAB308AOH DNA SDS formaldehyde False 2017-12-01 ENCODE 2 40 ENCFF539TVP, ENCFF643CGH 700345010 ENCODE Processing Pipeline d75129a57768089e947e34a4185b0dad https://www.encodeproject.org/files/ENCFF991WOD/@@download/ENCFF991WOD.bam GRCh38 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO partially characterized antibody ENCFF232PSU bam alignments ENCSR506KWJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens XRCC5-human ENCAB308AOH DNA SDS formaldehyde False 2017-12-01 ENCODE 1 40 ENCFF643CGH, ENCFF925UZZ 875444682 ENCODE Processing Pipeline 31b910dbac1bdc8cd5b033f0a59d8fdb https://www.encodeproject.org/files/ENCFF232PSU/@@download/ENCFF232PSU.bam GRCh38 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO partially characterized antibody ENCFF365IOS bigWig signal p-value ENCSR506KWJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens XRCC5-human ENCAB308AOH DNA SDS formaldehyde False 2017-12-01 ENCODE 1 ENCFF232PSU, ENCFF388TPI 863668851 ENCODE Processing Pipeline 124b1b010a1022a48d607f23f789d12f https://www.encodeproject.org/files/ENCFF365IOS/@@download/ENCFF365IOS.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO partially characterized antibody ENCFF910TTX bigWig signal p-value ENCSR506KWJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens XRCC5-human ENCAB308AOH DNA SDS formaldehyde False 2017-12-01 ENCODE 2 ENCFF248LWZ, ENCFF991WOD 757786388 ENCODE Processing Pipeline 783fd3fdc13fb4e792419d9bae6af623 https://www.encodeproject.org/files/ENCFF910TTX/@@download/ENCFF910TTX.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO partially characterized antibody ENCFF252GWY bigWig signal p-value ENCSR506KWJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens XRCC5-human ENCAB308AOH DNA SDS formaldehyde False 2017-12-01 ENCODE 1, 2 ENCFF232PSU, ENCFF248LWZ, ENCFF388TPI, ENCFF991WOD 1421789606 ENCODE Processing Pipeline 0b8e2e75dd387f2039ea9eb35d3e79cd https://www.encodeproject.org/files/ENCFF252GWY/@@download/ENCFF252GWY.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO partially characterized antibody ENCFF533FCA bigWig fold change over control ENCSR506KWJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens XRCC5-human ENCAB308AOH DNA SDS formaldehyde False 2017-12-01 ENCODE 1 ENCFF232PSU, ENCFF388TPI 578843739 ENCODE Processing Pipeline be41a266e7104185e3f267b517e7f0d4 https://www.encodeproject.org/files/ENCFF533FCA/@@download/ENCFF533FCA.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO partially characterized antibody ENCFF447MQY bigWig fold change over control ENCSR506KWJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens XRCC5-human ENCAB308AOH DNA SDS formaldehyde False 2017-12-01 ENCODE 2 ENCFF248LWZ, ENCFF991WOD 509580412 ENCODE Processing Pipeline 801f9614c90535802c7aa00de5805075 https://www.encodeproject.org/files/ENCFF447MQY/@@download/ENCFF447MQY.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO partially characterized antibody ENCFF095TJV bigWig fold change over control ENCSR506KWJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens XRCC5-human ENCAB308AOH DNA SDS formaldehyde False 2017-12-01 ENCODE 1, 2 ENCFF232PSU, ENCFF248LWZ, ENCFF388TPI, ENCFF991WOD 1209677513 ENCODE Processing Pipeline 80affa65d574e76eaeeb7bd5c2a24d6b https://www.encodeproject.org/files/ENCFF095TJV/@@download/ENCFF095TJV.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO partially characterized antibody ENCFF733DNR bed narrowPeak peaks ENCSR506KWJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens XRCC5-human ENCAB308AOH DNA SDS formaldehyde False 2017-12-01 ENCODE 1 ENCFF232PSU, ENCFF388TPI 6309446 ENCODE Processing Pipeline bfe95a5fd6a44e30259c30bf1a1e2ae4 https://www.encodeproject.org/files/ENCFF733DNR/@@download/ENCFF733DNR.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO partially characterized antibody ENCFF575CPG bed narrowPeak peaks ENCSR506KWJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens XRCC5-human ENCAB308AOH DNA SDS formaldehyde False 2017-12-01 ENCODE 2 ENCFF248LWZ, ENCFF991WOD 6286499 ENCODE Processing Pipeline b669924210e53da60ca0118e08862bb6 https://www.encodeproject.org/files/ENCFF575CPG/@@download/ENCFF575CPG.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO partially characterized antibody ENCFF031WEU bed narrowPeak peaks ENCSR506KWJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens XRCC5-human ENCAB308AOH DNA SDS formaldehyde False 2017-12-01 ENCODE 1, 2 ENCFF232PSU, ENCFF248LWZ, ENCFF388TPI, ENCFF991WOD 7067476 ENCODE Processing Pipeline 615df54c78447d711949e079f51c4499 https://www.encodeproject.org/files/ENCFF031WEU/@@download/ENCFF031WEU.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO partially characterized antibody ENCFF260MMT bigBed narrowPeak peaks ENCSR506KWJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens XRCC5-human ENCAB308AOH DNA SDS formaldehyde False 2017-12-01 ENCODE 1 ENCFF733DNR 13099971 ENCODE Processing Pipeline 32f70474be63aaf9df43c84d7a4fef05 https://www.encodeproject.org/files/ENCFF260MMT/@@download/ENCFF260MMT.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO partially characterized antibody ENCFF765MLB bigBed narrowPeak peaks ENCSR506KWJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens XRCC5-human ENCAB308AOH DNA SDS formaldehyde False 2017-12-01 ENCODE 2 ENCFF575CPG 12982185 ENCODE Processing Pipeline 5a246f8d3466f831b3324cc2f1bc0029 https://www.encodeproject.org/files/ENCFF765MLB/@@download/ENCFF765MLB.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO partially characterized antibody ENCFF204OIP bed narrowPeak conservative idr thresholded peaks ENCSR506KWJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens XRCC5-human ENCAB308AOH DNA SDS formaldehyde False 2017-12-01 ENCODE 1, 2 ENCFF031WEU, ENCFF419RSJ, ENCFF575CPG, ENCFF733DNR 197854 ENCODE Processing Pipeline 288f44cb292bcc77bbed6f7a9c31bdef https://www.encodeproject.org/files/ENCFF204OIP/@@download/ENCFF204OIP.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO partially characterized antibody ENCFF083DAL bigBed narrowPeak conservative idr thresholded peaks ENCSR506KWJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens XRCC5-human ENCAB308AOH DNA SDS formaldehyde False 2017-12-01 ENCODE 1, 2 ENCFF204OIP 375755 ENCODE Processing Pipeline b89a53ce086bad3a032b479288f7cd07 https://www.encodeproject.org/files/ENCFF083DAL/@@download/ENCFF083DAL.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO partially characterized antibody ENCFF996YMS bigBed narrowPeak peaks ENCSR506KWJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens XRCC5-human ENCAB308AOH DNA SDS formaldehyde False 2017-12-01 ENCODE 1, 2 ENCFF031WEU 12857981 ENCODE Processing Pipeline 15aebac81321e0f8e663a9da1254efbe https://www.encodeproject.org/files/ENCFF996YMS/@@download/ENCFF996YMS.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO partially characterized antibody ENCFF828QYP bigBed narrowPeak optimal idr thresholded peaks ENCSR506KWJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens XRCC5-human ENCAB308AOH DNA SDS formaldehyde False 2017-12-01 ENCODE 1, 2 ENCFF929TWP 412042 ENCODE Processing Pipeline 1e94e758099aecb3255ff0840eaa0e5e https://www.encodeproject.org/files/ENCFF828QYP/@@download/ENCFF828QYP.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO partially characterized antibody ENCFF929TWP bed narrowPeak optimal idr thresholded peaks ENCSR506KWJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens XRCC5-human ENCAB308AOH DNA SDS formaldehyde False 2017-12-01 ENCODE 1, 2 ENCFF031WEU, ENCFF419RSJ, ENCFF575CPG, ENCFF733DNR 224884 ENCODE Processing Pipeline b68998b0e9dddfba56900d32052315d1 https://www.encodeproject.org/files/ENCFF929TWP/@@download/ENCFF929TWP.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO partially characterized antibody ENCFF829CSZ bigBed narrowPeak conservative idr thresholded peaks ENCSR506KWJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens XRCC5-human ENCAB308AOH DNA SDS formaldehyde False 2017-12-01 ENCODE 1, 2 ENCFF920FBS 343914 ENCODE Processing Pipeline 3e343d6e9d2ed8f4907064ca6c0bd39d https://www.encodeproject.org/files/ENCFF829CSZ/@@download/ENCFF829CSZ.bigBed hg19 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO partially characterized antibody ENCFF928QCD bigBed narrowPeak optimal idr thresholded peaks ENCSR506KWJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens XRCC5-human ENCAB308AOH DNA SDS formaldehyde False 2017-12-01 ENCODE 1, 2 ENCFF998KKJ 380216 ENCODE Processing Pipeline 619cf487fb40b081c014ec71944f445b https://www.encodeproject.org/files/ENCFF928QCD/@@download/ENCFF928QCD.bigBed hg19 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO partially characterized antibody ENCFF920FBS bed narrowPeak conservative idr thresholded peaks ENCSR506KWJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens XRCC5-human ENCAB308AOH DNA SDS formaldehyde False 2017-12-01 ENCODE 1, 2 ENCFF001TDO, ENCFF245CYX, ENCFF720UBT, ENCFF755KRH 175200 ENCODE Processing Pipeline efa64aa3f22770d536772f343addf362 https://www.encodeproject.org/files/ENCFF920FBS/@@download/ENCFF920FBS.bed.gz hg19 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO partially characterized antibody ENCFF998KKJ bed narrowPeak optimal idr thresholded peaks ENCSR506KWJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens XRCC5-human ENCAB308AOH DNA SDS formaldehyde False 2017-12-01 ENCODE 1, 2 ENCFF001TDO, ENCFF245CYX, ENCFF720UBT, ENCFF755KRH 202079 ENCODE Processing Pipeline 7f68216ee11aceabaef58f989588a190 https://www.encodeproject.org/files/ENCFF998KKJ/@@download/ENCFF998KKJ.bed.gz hg19 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO partially characterized antibody ENCFF515TGR bam unfiltered alignments ENCSR506KWJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens XRCC5-human ENCAB308AOH DNA SDS formaldehyde False 2017-12-01 ENCODE 1 40 ENCFF807MUK, ENCFF925UZZ 1671483610 ENCODE Processing Pipeline 603f580b0514fa47d2c28f7d32b96372 https://www.encodeproject.org/files/ENCFF515TGR/@@download/ENCFF515TGR.bam hg19 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO partially characterized antibody ENCFF169KFN bam unfiltered alignments ENCSR506KWJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens XRCC5-human ENCAB308AOH DNA SDS formaldehyde False 2017-12-01 ENCODE 2 40 ENCFF539TVP, ENCFF807MUK 1370996487 ENCODE Processing Pipeline d8b9e2f542c3f089efec9b94076b37a6 https://www.encodeproject.org/files/ENCFF169KFN/@@download/ENCFF169KFN.bam hg19 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO partially characterized antibody ENCFF173LQG fastq reads ENCSR175EOM ChIP-seq EFO:0002067 K562 cell line Homo sapiens EHMT2-human ENCAB282XQE DNA False 2018-02-13 ENCODE 2 1 100 paired-ended 2 ENCFF611URC 3030764538 Michael Snyder, Stanford c2125e6ea891ac6d9647aa496261eaa5 https://www.encodeproject.org/files/ENCFF173LQG/@@download/ENCFF173LQG.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFA/ released antibody characterized with exemption experiment not submitted to GEO ENCFF611URC fastq reads ENCSR175EOM ChIP-seq EFO:0002067 K562 cell line Homo sapiens EHMT2-human ENCAB282XQE DNA False 2018-02-13 ENCODE 2 1 100 paired-ended 1 ENCFF173LQG 2987295922 Michael Snyder, Stanford 1213fd94c3317d2cdd172d30f860813e https://www.encodeproject.org/files/ENCFF611URC/@@download/ENCFF611URC.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFD/ released antibody characterized with exemption experiment not submitted to GEO ENCFF844OMR fastq reads ENCSR175EOM ChIP-seq EFO:0002067 K562 cell line Homo sapiens EHMT2-human ENCAB282XQE DNA False 2018-02-13 ENCODE 1 1 100 paired-ended 2 ENCFF698YEB 3142066977 Michael Snyder, Stanford afe31685d7de4e2e7ab14362dd8f684a https://www.encodeproject.org/files/ENCFF844OMR/@@download/ENCFF844OMR.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFH/ released antibody characterized with exemption experiment not submitted to GEO ENCFF698YEB fastq reads ENCSR175EOM ChIP-seq EFO:0002067 K562 cell line Homo sapiens EHMT2-human ENCAB282XQE DNA False 2018-02-13 ENCODE 1 1 100 paired-ended 1 ENCFF844OMR 3083078038 Michael Snyder, Stanford 6a655935f0dd4c4ceb87189e49f433ff https://www.encodeproject.org/files/ENCFF698YEB/@@download/ENCFF698YEB.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFF/ released antibody characterized with exemption experiment not submitted to GEO ENCFF386NMZ bam unfiltered alignments ENCSR175EOM ChIP-seq EFO:0002067 K562 cell line Homo sapiens EHMT2-human ENCAB282XQE DNA False 2018-02-13 ENCODE 2 100 ENCFF173LQG, ENCFF611URC, ENCFF643CGH 6473970928 ENCODE Processing Pipeline 46d21b2184b466c5b6e7962f06fb588d https://www.encodeproject.org/files/ENCFF386NMZ/@@download/ENCFF386NMZ.bam GRCh38 released antibody characterized with exemption experiment not submitted to GEO ENCFF269FDU bam unfiltered alignments ENCSR175EOM ChIP-seq EFO:0002067 K562 cell line Homo sapiens EHMT2-human ENCAB282XQE DNA False 2018-02-13 ENCODE 1 100 ENCFF643CGH, ENCFF698YEB, ENCFF844OMR 6669292116 ENCODE Processing Pipeline a70af1d70f37e8b22ee5891dc17f21c1 https://www.encodeproject.org/files/ENCFF269FDU/@@download/ENCFF269FDU.bam GRCh38 released antibody characterized with exemption experiment not submitted to GEO ENCFF874LOC bam alignments ENCSR175EOM ChIP-seq EFO:0002067 K562 cell line Homo sapiens EHMT2-human ENCAB282XQE DNA False 2018-02-13 ENCODE 1 100 ENCFF643CGH, ENCFF698YEB, ENCFF844OMR 5388558299 ENCODE Processing Pipeline feab8acaa4ad1d452d72e6ace43a07af https://www.encodeproject.org/files/ENCFF874LOC/@@download/ENCFF874LOC.bam GRCh38 released antibody characterized with exemption experiment not submitted to GEO ENCFF083HDY bam alignments ENCSR175EOM ChIP-seq EFO:0002067 K562 cell line Homo sapiens EHMT2-human ENCAB282XQE DNA False 2018-02-13 ENCODE 2 100 ENCFF173LQG, ENCFF611URC, ENCFF643CGH 5058580757 ENCODE Processing Pipeline 53453ffa3be04872a205f468e2318140 https://www.encodeproject.org/files/ENCFF083HDY/@@download/ENCFF083HDY.bam GRCh38 released antibody characterized with exemption experiment not submitted to GEO ENCFF619HZU bigWig signal p-value ENCSR175EOM ChIP-seq EFO:0002067 K562 cell line Homo sapiens EHMT2-human ENCAB282XQE DNA False 2018-02-13 ENCODE 2 ENCFF083HDY, ENCFF227IZS 987636128 ENCODE Processing Pipeline d51156698cfb139f2e13494c4b0ee5ff https://www.encodeproject.org/files/ENCFF619HZU/@@download/ENCFF619HZU.bigWig GRCh38 released antibody characterized with exemption experiment not submitted to GEO ENCFF129MQX bigWig fold change over control ENCSR175EOM ChIP-seq EFO:0002067 K562 cell line Homo sapiens EHMT2-human ENCAB282XQE DNA False 2018-02-13 ENCODE 1 ENCFF874LOC, ENCFF910IKB 1292044893 ENCODE Processing Pipeline 234121b5b23252a06eff2723c314be53 https://www.encodeproject.org/files/ENCFF129MQX/@@download/ENCFF129MQX.bigWig GRCh38 released antibody characterized with exemption experiment not submitted to GEO ENCFF682XPD bed narrowPeak optimal idr thresholded peaks ENCSR175EOM ChIP-seq EFO:0002067 K562 cell line Homo sapiens EHMT2-human ENCAB282XQE DNA False 2018-02-13 ENCODE 1, 2 ENCFF419RSJ, ENCFF467YDV, ENCFF674YQT, ENCFF874WUJ 368275 ENCODE Processing Pipeline b8af65ccc10365974dab1293c0c10101 https://www.encodeproject.org/files/ENCFF682XPD/@@download/ENCFF682XPD.bed.gz GRCh38 released antibody characterized with exemption experiment not submitted to GEO ENCFF467YDV bed narrowPeak peaks ENCSR175EOM ChIP-seq EFO:0002067 K562 cell line Homo sapiens EHMT2-human ENCAB282XQE DNA False 2018-02-13 ENCODE 2 ENCFF083HDY, ENCFF227IZS 6520297 ENCODE Processing Pipeline d05427011d096d59c9b4dfad6d3a2622 https://www.encodeproject.org/files/ENCFF467YDV/@@download/ENCFF467YDV.bed.gz GRCh38 released antibody characterized with exemption experiment not submitted to GEO ENCFF874WUJ bed narrowPeak peaks ENCSR175EOM ChIP-seq EFO:0002067 K562 cell line Homo sapiens EHMT2-human ENCAB282XQE DNA False 2018-02-13 ENCODE 1, 2 ENCFF083HDY, ENCFF227IZS, ENCFF874LOC, ENCFF910IKB 7280797 ENCODE Processing Pipeline 65a04d7734976b485246fd22c3cd2cc8 https://www.encodeproject.org/files/ENCFF874WUJ/@@download/ENCFF874WUJ.bed.gz GRCh38 released antibody characterized with exemption experiment not submitted to GEO ENCFF378GZG bigBed narrowPeak peaks ENCSR175EOM ChIP-seq EFO:0002067 K562 cell line Homo sapiens EHMT2-human ENCAB282XQE DNA False 2018-02-13 ENCODE 1, 2 ENCFF874WUJ 13191093 ENCODE Processing Pipeline 08634fec629470d78146eb672055a467 https://www.encodeproject.org/files/ENCFF378GZG/@@download/ENCFF378GZG.bigBed GRCh38 released antibody characterized with exemption experiment not submitted to GEO ENCFF650FUP bigBed narrowPeak optimal idr thresholded peaks ENCSR175EOM ChIP-seq EFO:0002067 K562 cell line Homo sapiens EHMT2-human ENCAB282XQE DNA False 2018-02-13 ENCODE 1, 2 ENCFF682XPD 807183 ENCODE Processing Pipeline 83cf9ab8afc8ab94eea434ad824e5bad https://www.encodeproject.org/files/ENCFF650FUP/@@download/ENCFF650FUP.bigBed GRCh38 released antibody characterized with exemption experiment not submitted to GEO ENCFF728OAR bigWig fold change over control ENCSR175EOM ChIP-seq EFO:0002067 K562 cell line Homo sapiens EHMT2-human ENCAB282XQE DNA False 2018-02-13 ENCODE 1, 2 ENCFF083HDY, ENCFF227IZS, ENCFF874LOC, ENCFF910IKB 2241528648 ENCODE Processing Pipeline 88a2f05ed7ec39c55690263ad9cbd5a1 https://www.encodeproject.org/files/ENCFF728OAR/@@download/ENCFF728OAR.bigWig GRCh38 released antibody characterized with exemption experiment not submitted to GEO ENCFF674YQT bed narrowPeak peaks ENCSR175EOM ChIP-seq EFO:0002067 K562 cell line Homo sapiens EHMT2-human ENCAB282XQE DNA False 2018-02-13 ENCODE 1 ENCFF874LOC, ENCFF910IKB 7041507 ENCODE Processing Pipeline c5d3a5c655bb20d84d7b520ff8359add https://www.encodeproject.org/files/ENCFF674YQT/@@download/ENCFF674YQT.bed.gz GRCh38 released antibody characterized with exemption experiment not submitted to GEO ENCFF229QDQ bigBed narrowPeak peaks ENCSR175EOM ChIP-seq EFO:0002067 K562 cell line Homo sapiens EHMT2-human ENCAB282XQE DNA False 2018-02-13 ENCODE 1 ENCFF674YQT 13153827 ENCODE Processing Pipeline f9d2064d7f3bd8081f1c386527b3e9eb https://www.encodeproject.org/files/ENCFF229QDQ/@@download/ENCFF229QDQ.bigBed GRCh38 released antibody characterized with exemption experiment not submitted to GEO ENCFF419QKE bigBed narrowPeak peaks ENCSR175EOM ChIP-seq EFO:0002067 K562 cell line Homo sapiens EHMT2-human ENCAB282XQE DNA False 2018-02-13 ENCODE 2 ENCFF467YDV 11270567 ENCODE Processing Pipeline ed74ec8754fa0fb96d1d7b4c9b378bea https://www.encodeproject.org/files/ENCFF419QKE/@@download/ENCFF419QKE.bigBed GRCh38 released antibody characterized with exemption experiment not submitted to GEO ENCFF045KTH bed narrowPeak conservative idr thresholded peaks ENCSR175EOM ChIP-seq EFO:0002067 K562 cell line Homo sapiens EHMT2-human ENCAB282XQE DNA False 2018-02-13 ENCODE 1, 2 ENCFF419RSJ, ENCFF467YDV, ENCFF674YQT, ENCFF874WUJ 242027 ENCODE Processing Pipeline 02fed98807398672821f85a73bb984bc https://www.encodeproject.org/files/ENCFF045KTH/@@download/ENCFF045KTH.bed.gz GRCh38 released antibody characterized with exemption experiment not submitted to GEO ENCFF863OTX bigWig signal p-value ENCSR175EOM ChIP-seq EFO:0002067 K562 cell line Homo sapiens EHMT2-human ENCAB282XQE DNA False 2018-02-13 ENCODE 1, 2 ENCFF083HDY, ENCFF227IZS, ENCFF874LOC, ENCFF910IKB 2220263391 ENCODE Processing Pipeline 5175b270c48ca436479a2e04fb144cd6 https://www.encodeproject.org/files/ENCFF863OTX/@@download/ENCFF863OTX.bigWig GRCh38 released antibody characterized with exemption experiment not submitted to GEO ENCFF146FHZ bigWig signal p-value ENCSR175EOM ChIP-seq EFO:0002067 K562 cell line Homo sapiens EHMT2-human ENCAB282XQE DNA False 2018-02-13 ENCODE 1 ENCFF874LOC, ENCFF910IKB 1259941552 ENCODE Processing Pipeline c250eb5f8d4c871e6751f88d948c3458 https://www.encodeproject.org/files/ENCFF146FHZ/@@download/ENCFF146FHZ.bigWig GRCh38 released antibody characterized with exemption experiment not submitted to GEO ENCFF773VRL bigWig fold change over control ENCSR175EOM ChIP-seq EFO:0002067 K562 cell line Homo sapiens EHMT2-human ENCAB282XQE DNA False 2018-02-13 ENCODE 2 ENCFF083HDY, ENCFF227IZS 1201194248 ENCODE Processing Pipeline c69b681c51ebbaeab9c91b87591f80e5 https://www.encodeproject.org/files/ENCFF773VRL/@@download/ENCFF773VRL.bigWig GRCh38 released antibody characterized with exemption experiment not submitted to GEO ENCFF644FUU bigBed narrowPeak conservative idr thresholded peaks ENCSR175EOM ChIP-seq EFO:0002067 K562 cell line Homo sapiens EHMT2-human ENCAB282XQE DNA False 2018-02-13 ENCODE 1, 2 ENCFF045KTH 487217 ENCODE Processing Pipeline 7d3de627f4f7d72214d591f7e692c19c https://www.encodeproject.org/files/ENCFF644FUU/@@download/ENCFF644FUU.bigBed GRCh38 released antibody characterized with exemption experiment not submitted to GEO ENCFF810HJE bam unfiltered alignments ENCSR175EOM ChIP-seq EFO:0002067 K562 cell line Homo sapiens EHMT2-human ENCAB282XQE DNA False 2018-02-13 ENCODE 2 100 ENCFF173LQG, ENCFF611URC, ENCFF807MUK 6468163347 ENCODE Processing Pipeline 259ed08b58ddf4b2c140aa99e5b39f29 https://www.encodeproject.org/files/ENCFF810HJE/@@download/ENCFF810HJE.bam hg19 released antibody characterized with exemption experiment not submitted to GEO ENCFF018JRT bam unfiltered alignments ENCSR175EOM ChIP-seq EFO:0002067 K562 cell line Homo sapiens EHMT2-human ENCAB282XQE DNA False 2018-02-13 ENCODE 1 100 ENCFF698YEB, ENCFF807MUK, ENCFF844OMR 6664192123 ENCODE Processing Pipeline 362bb364e7bfe3fe3b697c1cfdceca8d https://www.encodeproject.org/files/ENCFF018JRT/@@download/ENCFF018JRT.bam hg19 released antibody characterized with exemption experiment not submitted to GEO ENCFF226XCD bam alignments ENCSR175EOM ChIP-seq EFO:0002067 K562 cell line Homo sapiens EHMT2-human ENCAB282XQE DNA False 2018-02-13 ENCODE 1 100 ENCFF698YEB, ENCFF807MUK, ENCFF844OMR 5385572465 ENCODE Processing Pipeline 0f8c35045bb68a5b62a2b806ef6f1d94 https://www.encodeproject.org/files/ENCFF226XCD/@@download/ENCFF226XCD.bam hg19 released antibody characterized with exemption experiment not submitted to GEO ENCFF895ARY bam alignments ENCSR175EOM ChIP-seq EFO:0002067 K562 cell line Homo sapiens EHMT2-human ENCAB282XQE DNA False 2018-02-13 ENCODE 2 100 ENCFF173LQG, ENCFF611URC, ENCFF807MUK 5054665382 ENCODE Processing Pipeline 2d8f1474e333b63f1c0d341fa2c0cde5 https://www.encodeproject.org/files/ENCFF895ARY/@@download/ENCFF895ARY.bam hg19 released antibody characterized with exemption experiment not submitted to GEO ENCFF477EQH bigWig signal p-value ENCSR175EOM ChIP-seq EFO:0002067 K562 cell line Homo sapiens EHMT2-human ENCAB282XQE DNA False 2018-02-13 ENCODE 1 ENCFF226XCD, ENCFF581ZJL 1331996762 ENCODE Processing Pipeline 184703a0a177bdaa539e4f99352b48eb https://www.encodeproject.org/files/ENCFF477EQH/@@download/ENCFF477EQH.bigWig hg19 released antibody characterized with exemption experiment not submitted to GEO ENCFF337HDN bigWig fold change over control ENCSR175EOM ChIP-seq EFO:0002067 K562 cell line Homo sapiens EHMT2-human ENCAB282XQE DNA False 2018-02-13 ENCODE 1 ENCFF226XCD, ENCFF581ZJL 1286413881 ENCODE Processing Pipeline 2969e7dd3cfb6c2c7fcd987177ea0682 https://www.encodeproject.org/files/ENCFF337HDN/@@download/ENCFF337HDN.bigWig hg19 released antibody characterized with exemption experiment not submitted to GEO ENCFF603GSB bed narrowPeak peaks ENCSR175EOM ChIP-seq EFO:0002067 K562 cell line Homo sapiens EHMT2-human ENCAB282XQE DNA False 2018-02-13 ENCODE 1, 2 ENCFF051LWI, ENCFF226XCD, ENCFF581ZJL, ENCFF895ARY 7279331 ENCODE Processing Pipeline 7f789687bba49fc4c8c383ac37f4a783 https://www.encodeproject.org/files/ENCFF603GSB/@@download/ENCFF603GSB.bed.gz hg19 released antibody characterized with exemption experiment not submitted to GEO ENCFF356KWW bigBed narrowPeak peaks ENCSR175EOM ChIP-seq EFO:0002067 K562 cell line Homo sapiens EHMT2-human ENCAB282XQE DNA False 2018-02-13 ENCODE 1 ENCFF148ZUB 13143132 ENCODE Processing Pipeline 3a0a26f728ad74b692a20469c6da442b https://www.encodeproject.org/files/ENCFF356KWW/@@download/ENCFF356KWW.bigBed hg19 released antibody characterized with exemption experiment not submitted to GEO ENCFF146THB bigBed narrowPeak optimal idr thresholded peaks ENCSR175EOM ChIP-seq EFO:0002067 K562 cell line Homo sapiens EHMT2-human ENCAB282XQE DNA False 2018-02-13 ENCODE 1, 2 ENCFF806BDC 794072 ENCODE Processing Pipeline ec6d68250c6de3adb6d718aa7d4e5b05 https://www.encodeproject.org/files/ENCFF146THB/@@download/ENCFF146THB.bigBed hg19 released antibody characterized with exemption experiment not submitted to GEO ENCFF148ZUB bed narrowPeak peaks ENCSR175EOM ChIP-seq EFO:0002067 K562 cell line Homo sapiens EHMT2-human ENCAB282XQE DNA False 2018-02-13 ENCODE 1 ENCFF226XCD, ENCFF581ZJL 7040840 ENCODE Processing Pipeline a472f2327980a114d69596d0764f8fb2 https://www.encodeproject.org/files/ENCFF148ZUB/@@download/ENCFF148ZUB.bed.gz hg19 released antibody characterized with exemption experiment not submitted to GEO ENCFF806BDC bed narrowPeak optimal idr thresholded peaks ENCSR175EOM ChIP-seq EFO:0002067 K562 cell line Homo sapiens EHMT2-human ENCAB282XQE DNA False 2018-02-13 ENCODE 1, 2 ENCFF001TDO, ENCFF148ZUB, ENCFF315NKB, ENCFF603GSB 363033 ENCODE Processing Pipeline 4c0a8985ef6a22eda28694f0e09b57f6 https://www.encodeproject.org/files/ENCFF806BDC/@@download/ENCFF806BDC.bed.gz hg19 released antibody characterized with exemption experiment not submitted to GEO ENCFF063XID bigWig signal p-value ENCSR175EOM ChIP-seq EFO:0002067 K562 cell line Homo sapiens EHMT2-human ENCAB282XQE DNA False 2018-02-13 ENCODE 2 ENCFF051LWI, ENCFF895ARY 1243309045 ENCODE Processing Pipeline 046607e2aa18e42d29ee5b2aa182bd58 https://www.encodeproject.org/files/ENCFF063XID/@@download/ENCFF063XID.bigWig hg19 released antibody characterized with exemption experiment not submitted to GEO ENCFF491IZP bigWig signal p-value ENCSR175EOM ChIP-seq EFO:0002067 K562 cell line Homo sapiens EHMT2-human ENCAB282XQE DNA False 2018-02-13 ENCODE 1, 2 ENCFF051LWI, ENCFF226XCD, ENCFF581ZJL, ENCFF895ARY 2120345363 ENCODE Processing Pipeline 8fc7352c5526fe69c57934da6adcc194 https://www.encodeproject.org/files/ENCFF491IZP/@@download/ENCFF491IZP.bigWig hg19 released antibody characterized with exemption experiment not submitted to GEO ENCFF034RJC bigWig fold change over control ENCSR175EOM ChIP-seq EFO:0002067 K562 cell line Homo sapiens EHMT2-human ENCAB282XQE DNA False 2018-02-13 ENCODE 2 ENCFF051LWI, ENCFF895ARY 1196705016 ENCODE Processing Pipeline 965483aabb99d739ff2fcf59db2c82cf https://www.encodeproject.org/files/ENCFF034RJC/@@download/ENCFF034RJC.bigWig hg19 released antibody characterized with exemption experiment not submitted to GEO ENCFF982RMW bigWig fold change over control ENCSR175EOM ChIP-seq EFO:0002067 K562 cell line Homo sapiens EHMT2-human ENCAB282XQE DNA False 2018-02-13 ENCODE 1, 2 ENCFF051LWI, ENCFF226XCD, ENCFF581ZJL, ENCFF895ARY 2241442715 ENCODE Processing Pipeline ea8014f9b75f3b40eeba132781518b7f https://www.encodeproject.org/files/ENCFF982RMW/@@download/ENCFF982RMW.bigWig hg19 released antibody characterized with exemption experiment not submitted to GEO ENCFF315NKB bed narrowPeak peaks ENCSR175EOM ChIP-seq EFO:0002067 K562 cell line Homo sapiens EHMT2-human ENCAB282XQE DNA False 2018-02-13 ENCODE 2 ENCFF051LWI, ENCFF895ARY 6499963 ENCODE Processing Pipeline a110ec62c08db14cd9252d40779c1ef5 https://www.encodeproject.org/files/ENCFF315NKB/@@download/ENCFF315NKB.bed.gz hg19 released antibody characterized with exemption experiment not submitted to GEO ENCFF132DPJ bigBed narrowPeak peaks ENCSR175EOM ChIP-seq EFO:0002067 K562 cell line Homo sapiens EHMT2-human ENCAB282XQE DNA False 2018-02-13 ENCODE 2 ENCFF315NKB 11266502 ENCODE Processing Pipeline 2e5710a8a7c5a9e7edcc64bb21079d98 https://www.encodeproject.org/files/ENCFF132DPJ/@@download/ENCFF132DPJ.bigBed hg19 released antibody characterized with exemption experiment not submitted to GEO ENCFF665VQR bigBed narrowPeak conservative idr thresholded peaks ENCSR175EOM ChIP-seq EFO:0002067 K562 cell line Homo sapiens EHMT2-human ENCAB282XQE DNA False 2018-02-13 ENCODE 1, 2 ENCFF093GSD 483232 ENCODE Processing Pipeline 379461928a80a5e8a35a93ea7c2fe457 https://www.encodeproject.org/files/ENCFF665VQR/@@download/ENCFF665VQR.bigBed hg19 released antibody characterized with exemption experiment not submitted to GEO ENCFF496ATY bigBed narrowPeak peaks ENCSR175EOM ChIP-seq EFO:0002067 K562 cell line Homo sapiens EHMT2-human ENCAB282XQE DNA False 2018-02-13 ENCODE 1, 2 ENCFF603GSB 13180896 ENCODE Processing Pipeline cd4b41c735c793fbe0ed06720b4fe368 https://www.encodeproject.org/files/ENCFF496ATY/@@download/ENCFF496ATY.bigBed hg19 released antibody characterized with exemption experiment not submitted to GEO ENCFF093GSD bed narrowPeak conservative idr thresholded peaks ENCSR175EOM ChIP-seq EFO:0002067 K562 cell line Homo sapiens EHMT2-human ENCAB282XQE DNA False 2018-02-13 ENCODE 1, 2 ENCFF001TDO, ENCFF148ZUB, ENCFF315NKB, ENCFF603GSB 240807 ENCODE Processing Pipeline fed0a7de3fc464aaf1491991047d37a8 https://www.encodeproject.org/files/ENCFF093GSD/@@download/ENCFF093GSD.bed.gz hg19 released antibody characterized with exemption experiment not submitted to GEO ENCFF000YGK bam alignments ENCSR000DOJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens BRF1-human ENCAB000AEM DNA see document see document False 2011-10-29 ENCODE 1 ENCFF000YGP 287068036 Kevin Struhl, HMS cec4e8359801f6b2778d77857a5d1984 https://www.encodeproject.org/files/ENCFF000YGK/@@download/ENCFF000YGK.bam hg19 released biological replicates with identical biosample insufficient read length ENCFF000YGL bam alignments ENCSR000DOJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens BRF1-human ENCAB000AEM DNA see document see document False 2011-10-29 ENCODE 2 ENCFF000YGS 219679702 Kevin Struhl, HMS 7ef5e0a402350f666cb16497d825d0e7 https://www.encodeproject.org/files/ENCFF000YGL/@@download/ENCFF000YGL.bam hg19 released biological replicates with identical biosample insufficient read length ENCFF000YGM bam alignments ENCSR000DOJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens BRF1-human ENCAB000AEM DNA see document see document False 2011-10-29 ENCODE 3 ENCFF000YGR 116977443 Kevin Struhl, HMS 73e014ea5121f7386d838bd76af92e09 https://www.encodeproject.org/files/ENCFF000YGM/@@download/ENCFF000YGM.bam hg19 released biological replicates with identical biosample insufficient read length ENCFF000YGN bigBed narrowPeak peaks ENCSR000DOJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens BRF1-human ENCAB000AEM DNA see document see document False 2011-10-29 ENCODE ENCFF001VMC 80096 Kevin Struhl, HMS 37674a72c4ec009530e79a1f9a11fc13 https://www.encodeproject.org/files/ENCFF000YGN/@@download/ENCFF000YGN.bigBed hg19 released biological replicates with identical biosample insufficient read length ENCFF000YGO bigWig signal ENCSR000DOJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens BRF1-human ENCAB000AEM DNA see document see document False 2011-10-29 ENCODE 319695699 Kevin Struhl, HMS b7fcffdbfbe5318ff9d25da9c2acb406 https://www.encodeproject.org/files/ENCFF000YGO/@@download/ENCFF000YGO.bigWig hg19 released biological replicates with identical biosample, missing derived_from insufficient read length ENCFF000YGP fastq reads ENCSR000DOJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens BRF1-human ENCAB000AEM DNA see document see document False 2011-10-29 ENCODE 1 1 27 single-ended 225852664 Kevin Struhl, HMS 11ad8cb0f7853431a6b85b8535da3bc5 https://www.encodeproject.org/files/ENCFF000YGP/@@download/ENCFF000YGP.fastq.gz Illumina Genome Analyzer released biological replicates with identical biosample insufficient read length, missing controlled_by ENCFF000YGR fastq reads ENCSR000DOJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens BRF1-human ENCAB000AEM DNA see document see document False 2011-10-29 ENCODE 3 1 27 single-ended 92302103 Kevin Struhl, HMS 8ca4dd516a9e839ee446bacb7c9ff332 https://www.encodeproject.org/files/ENCFF000YGR/@@download/ENCFF000YGR.fastq.gz Illumina Genome Analyzer released biological replicates with identical biosample insufficient read length, missing controlled_by ENCFF000YGS fastq reads ENCSR000DOJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens BRF1-human ENCAB000AEM DNA see document see document False 2011-10-29 ENCODE 2 1 27 single-ended 164968246 Kevin Struhl, HMS 24cf38467a29f009d27f8077dd0bd481 https://www.encodeproject.org/files/ENCFF000YGS/@@download/ENCFF000YGS.fastq.gz Illumina Genome Analyzer released biological replicates with identical biosample insufficient read length, missing controlled_by ENCFF001VMC bed narrowPeak peaks ENCSR000DOJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens BRF1-human ENCAB000AEM DNA see document see document False 2011-10-29 ENCODE 1975 Kevin Struhl, HMS 2c48e5cbdc23bf72359224b3c7554089 https://www.encodeproject.org/files/ENCFF001VMC/@@download/ENCFF001VMC.bed.gz hg19 released biological replicates with identical biosample, missing derived_from insufficient read length ENCFF002CVR bed narrowPeak optimal idr thresholded peaks ENCSR000DOJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens BRF1-human ENCAB000AEM DNA see document see document False 2011-10-29 ENCODE 5144 ENCODE Consortium Analysis Working Group 64986bc4157feecb565adbfe599fcc07 https://www.encodeproject.org/files/ENCFF002CVR/@@download/ENCFF002CVR.bed.gz hg19 released biological replicates with identical biosample, missing derived_from insufficient read length ENCFF822AYT bigBed narrowPeak optimal idr thresholded peaks ENCSR000DOJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens BRF1-human ENCAB000AEM DNA see document see document False 2011-10-29 ENCODE ENCFF002CVR 86829 ENCODE Consortium 79746475fcf4cbed8110b89632b150d8 https://www.encodeproject.org/files/ENCFF822AYT/@@download/ENCFF822AYT.bigBed hg19 released biological replicates with identical biosample insufficient read length ENCFF996MYT bam unfiltered alignments ENCSR532EMP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF740-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1 100 ENCFF607RXB, ENCFF633AET, ENCFF807MUK 6729483303 ENCODE Processing Pipeline aed777687ddc099198ba637e400916fa https://www.encodeproject.org/files/ENCFF996MYT/@@download/ENCFF996MYT.bam hg19 released missing genetic modification characterization, mild to moderate bottlenecking ENCFF606PPQ bam unfiltered alignments ENCSR532EMP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF740-human ENCAB728YTO DNA False 2016-08-24 ENCODE 2 100 ENCFF111REI, ENCFF554XIX, ENCFF807MUK 8719878041 ENCODE Processing Pipeline 4129dd676fe98cd2538e5c619f3b3f9b https://www.encodeproject.org/files/ENCFF606PPQ/@@download/ENCFF606PPQ.bam hg19 released missing genetic modification characterization, mild to moderate bottlenecking ENCFF607RXB fastq reads ENCSR532EMP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF740-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1 1 100 paired-ended 1 ENCFF633AET 3049744794 Michael Snyder, Stanford 4cf340496361518f69e865ded48b6420 SRA:SRR5111729 https://www.encodeproject.org/files/ENCFF607RXB/@@download/ENCFF607RXB.fastq.gz Illumina HiSeq 2000 /files/ENCFF055UND/, /files/ENCFF406XFM/ released missing genetic modification characterization, mild to moderate bottlenecking ENCFF633AET fastq reads ENCSR532EMP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF740-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1 1 100 paired-ended 2 ENCFF607RXB 3128827700 Michael Snyder, Stanford b2abf9f5ce87a17d868cea2f72b8ede1 SRA:SRR5111729 https://www.encodeproject.org/files/ENCFF633AET/@@download/ENCFF633AET.fastq.gz Illumina HiSeq 2000 /files/ENCFF055UND/, /files/ENCFF406XFM/ released missing genetic modification characterization, mild to moderate bottlenecking ENCFF554XIX fastq reads ENCSR532EMP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF740-human ENCAB728YTO DNA False 2016-08-24 ENCODE 2 1 100 paired-ended 1 ENCFF111REI 4107622003 Michael Snyder, Stanford c6ba4ad71e7a6621a147fc627caaead1 SRA:SRR5111728 https://www.encodeproject.org/files/ENCFF554XIX/@@download/ENCFF554XIX.fastq.gz Illumina HiSeq 2000 /files/ENCFF055UND/, /files/ENCFF406XFM/ released missing genetic modification characterization, mild to moderate bottlenecking ENCFF111REI fastq reads ENCSR532EMP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF740-human ENCAB728YTO DNA False 2016-08-24 ENCODE 2 1 100 paired-ended 2 ENCFF554XIX 4214864391 Michael Snyder, Stanford 9fc325201bd588f27010a8483aceb608 SRA:SRR5111728 https://www.encodeproject.org/files/ENCFF111REI/@@download/ENCFF111REI.fastq.gz Illumina HiSeq 2000 /files/ENCFF055UND/, /files/ENCFF406XFM/ released missing genetic modification characterization, mild to moderate bottlenecking ENCFF424AYM bam alignments ENCSR532EMP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF740-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1 ENCFF607RXB, ENCFF633AET, ENCFF807MUK 5350737101 ENCODE Processing Pipeline f96ef5a8100db27e9272d80d4ec518cb https://www.encodeproject.org/files/ENCFF424AYM/@@download/ENCFF424AYM.bam hg19 released missing genetic modification characterization, mild to moderate bottlenecking ENCFF130RDX bam alignments ENCSR532EMP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF740-human ENCAB728YTO DNA False 2016-08-24 ENCODE 2 ENCFF111REI, ENCFF554XIX, ENCFF807MUK 6447954457 ENCODE Processing Pipeline 04aa903121410751c8008c100899d810 https://www.encodeproject.org/files/ENCFF130RDX/@@download/ENCFF130RDX.bam hg19 released missing genetic modification characterization, mild to moderate bottlenecking ENCFF068VWL bigWig signal p-value ENCSR532EMP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF740-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1 ENCFF424AYM, ENCFF990ZOB 1193278202 ENCODE Processing Pipeline c87b207166fcdcc32d572b9ebaadad2d https://www.encodeproject.org/files/ENCFF068VWL/@@download/ENCFF068VWL.bigWig hg19 released missing genetic modification characterization, mild to moderate bottlenecking ENCFF612HAO bigWig signal p-value ENCSR532EMP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF740-human ENCAB728YTO DNA False 2016-08-24 ENCODE 2 ENCFF130RDX, ENCFF990ZOB 1438465156 ENCODE Processing Pipeline 298acffa159c17b240a6aa44d5243585 https://www.encodeproject.org/files/ENCFF612HAO/@@download/ENCFF612HAO.bigWig hg19 released missing genetic modification characterization, mild to moderate bottlenecking ENCFF415MTB bed narrowPeak peaks ENCSR532EMP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF740-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1 ENCFF424AYM, ENCFF990ZOB 7060962 ENCODE Processing Pipeline 60dfebafea7c06794e27f9c17994ba44 https://www.encodeproject.org/files/ENCFF415MTB/@@download/ENCFF415MTB.bed.gz hg19 released missing genetic modification characterization, mild to moderate bottlenecking ENCFF382KZM bigBed narrowPeak peaks ENCSR532EMP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF740-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1 ENCFF415MTB 12992893 ENCODE Processing Pipeline ef4c556d7bd1f96431e788e07b1fa8e9 https://www.encodeproject.org/files/ENCFF382KZM/@@download/ENCFF382KZM.bigBed hg19 released missing genetic modification characterization, mild to moderate bottlenecking ENCFF334GUE bigWig fold change over control ENCSR532EMP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF740-human ENCAB728YTO DNA False 2016-08-24 ENCODE 2 ENCFF130RDX, ENCFF990ZOB 1430278732 ENCODE Processing Pipeline 1a064d0fedec3b1993121068f87cdd55 https://www.encodeproject.org/files/ENCFF334GUE/@@download/ENCFF334GUE.bigWig hg19 released missing genetic modification characterization, mild to moderate bottlenecking ENCFF623GLE bigWig fold change over control ENCSR532EMP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF740-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF130RDX, ENCFF424AYM, ENCFF990ZOB 1986467041 ENCODE Processing Pipeline 369a6bab45312d97baa5be2116a713f5 https://www.encodeproject.org/files/ENCFF623GLE/@@download/ENCFF623GLE.bigWig hg19 released missing genetic modification characterization, mild to moderate bottlenecking ENCFF098YLP bigWig fold change over control ENCSR532EMP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF740-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1 ENCFF424AYM, ENCFF990ZOB 1314357853 ENCODE Processing Pipeline 003aea44cd1e1576259a312faab447ce https://www.encodeproject.org/files/ENCFF098YLP/@@download/ENCFF098YLP.bigWig hg19 released missing genetic modification characterization, mild to moderate bottlenecking ENCFF996DAB bed narrowPeak peaks ENCSR532EMP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF740-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF130RDX, ENCFF424AYM, ENCFF990ZOB 7376876 ENCODE Processing Pipeline e5bd2c484aaa549f135b6ae7525a4173 https://www.encodeproject.org/files/ENCFF996DAB/@@download/ENCFF996DAB.bed.gz hg19 released missing genetic modification characterization, mild to moderate bottlenecking ENCFF315MUK bigWig signal p-value ENCSR532EMP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF740-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF130RDX, ENCFF424AYM, ENCFF990ZOB 1413604365 ENCODE Processing Pipeline 1e9b95ed0baef2f33e0de2d6cb80fec7 https://www.encodeproject.org/files/ENCFF315MUK/@@download/ENCFF315MUK.bigWig hg19 released missing genetic modification characterization, mild to moderate bottlenecking ENCFF606TEA bed narrowPeak peaks ENCSR532EMP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF740-human ENCAB728YTO DNA False 2016-08-24 ENCODE 2 ENCFF130RDX, ENCFF990ZOB 7210069 ENCODE Processing Pipeline 48f782a7be2f1c2cbeb3286ef0fcc710 https://www.encodeproject.org/files/ENCFF606TEA/@@download/ENCFF606TEA.bed.gz hg19 released missing genetic modification characterization, mild to moderate bottlenecking ENCFF956DAP bigBed narrowPeak peaks ENCSR532EMP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF740-human ENCAB728YTO DNA False 2016-08-24 ENCODE 2 ENCFF606TEA 13008202 ENCODE Processing Pipeline 96852c14c791f8072d3ec9b56badd793 https://www.encodeproject.org/files/ENCFF956DAP/@@download/ENCFF956DAP.bigBed hg19 released missing genetic modification characterization, mild to moderate bottlenecking ENCFF080ATC bigBed narrowPeak conservative idr thresholded peaks ENCSR532EMP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF740-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF583QKD 284646 ENCODE Processing Pipeline 464ad905645a41c5f8a718e20a43899e https://www.encodeproject.org/files/ENCFF080ATC/@@download/ENCFF080ATC.bigBed hg19 released missing genetic modification characterization, mild to moderate bottlenecking ENCFF039AMQ bigBed narrowPeak optimal idr thresholded peaks ENCSR532EMP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF740-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF545RHH 334234 ENCODE Processing Pipeline e22de49623a4b610879a2eabb2791cba https://www.encodeproject.org/files/ENCFF039AMQ/@@download/ENCFF039AMQ.bigBed hg19 released missing genetic modification characterization, mild to moderate bottlenecking ENCFF307KBQ bigBed narrowPeak peaks ENCSR532EMP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF740-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF996DAB 12986745 ENCODE Processing Pipeline 95e5cf1cdd6c4fe9871181b91ec3e83a https://www.encodeproject.org/files/ENCFF307KBQ/@@download/ENCFF307KBQ.bigBed hg19 released missing genetic modification characterization, mild to moderate bottlenecking ENCFF583QKD bed narrowPeak conservative idr thresholded peaks ENCSR532EMP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF740-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF001TDO, ENCFF415MTB, ENCFF606TEA, ENCFF996DAB 88975 ENCODE Processing Pipeline 7addb56110a37189923a726b167981d2 https://www.encodeproject.org/files/ENCFF583QKD/@@download/ENCFF583QKD.bed.gz hg19 released missing genetic modification characterization, mild to moderate bottlenecking ENCFF545RHH bed narrowPeak optimal idr thresholded peaks ENCSR532EMP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF740-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF001TDO, ENCFF415MTB, ENCFF606TEA, ENCFF996DAB 114029 ENCODE Processing Pipeline 5ba0b64c3abc78bf61a940ba47b5cb4f https://www.encodeproject.org/files/ENCFF545RHH/@@download/ENCFF545RHH.bed.gz hg19 released missing genetic modification characterization, mild to moderate bottlenecking ENCFF850OUI bam unfiltered alignments ENCSR532EMP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF740-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1 100 ENCFF607RXB, ENCFF633AET, ENCFF643CGH 6740493697 ENCODE Processing Pipeline 9d3f849233154a9c9e63280cfad04903 https://www.encodeproject.org/files/ENCFF850OUI/@@download/ENCFF850OUI.bam GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking ENCFF831QFF bam unfiltered alignments ENCSR532EMP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF740-human ENCAB728YTO DNA False 2016-08-24 ENCODE 2 100 ENCFF111REI, ENCFF554XIX, ENCFF643CGH 8731621149 ENCODE Processing Pipeline 403575aa911c617eafeb15c392b3df09 https://www.encodeproject.org/files/ENCFF831QFF/@@download/ENCFF831QFF.bam GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking ENCFF165STC bam alignments ENCSR532EMP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF740-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1 100 ENCFF607RXB, ENCFF633AET, ENCFF643CGH 5350483465 ENCODE Processing Pipeline 0ebed50d70a6cac077c9e6a59177a36c https://www.encodeproject.org/files/ENCFF165STC/@@download/ENCFF165STC.bam GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking ENCFF694KHP bam alignments ENCSR532EMP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF740-human ENCAB728YTO DNA False 2016-08-24 ENCODE 2 100 ENCFF111REI, ENCFF554XIX, ENCFF643CGH 6447864103 ENCODE Processing Pipeline d58d544cfa594c433a2c71bac9632e7c https://www.encodeproject.org/files/ENCFF694KHP/@@download/ENCFF694KHP.bam GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking ENCFF164NGL bigWig signal p-value ENCSR532EMP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF740-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1 ENCFF165STC, ENCFF680XQR 1207494753 ENCODE Processing Pipeline 3a52b1b24158b2e592fb880797e8c974 https://www.encodeproject.org/files/ENCFF164NGL/@@download/ENCFF164NGL.bigWig GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking ENCFF060GGE bigWig signal p-value ENCSR532EMP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF740-human ENCAB728YTO DNA False 2016-08-24 ENCODE 2 ENCFF680XQR, ENCFF694KHP 1429242735 ENCODE Processing Pipeline 4dbf133ff127cdff0805ebb73eb6488f https://www.encodeproject.org/files/ENCFF060GGE/@@download/ENCFF060GGE.bigWig GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking ENCFF926DOR bigWig signal p-value ENCSR532EMP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF740-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF165STC, ENCFF680XQR, ENCFF694KHP 1406981421 ENCODE Processing Pipeline 09e35d0cf6e1a6dfe8586841d9303ff8 https://www.encodeproject.org/files/ENCFF926DOR/@@download/ENCFF926DOR.bigWig GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking ENCFF975PXF bigWig fold change over control ENCSR532EMP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF740-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1 ENCFF165STC, ENCFF680XQR 1304314924 ENCODE Processing Pipeline a3db3c05418974caf994c585b34744ba https://www.encodeproject.org/files/ENCFF975PXF/@@download/ENCFF975PXF.bigWig GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking ENCFF287LBS bigWig fold change over control ENCSR532EMP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF740-human ENCAB728YTO DNA False 2016-08-24 ENCODE 2 ENCFF680XQR, ENCFF694KHP 1422958312 ENCODE Processing Pipeline 557cf428bcb1dcbaba3799b5a87cc58a https://www.encodeproject.org/files/ENCFF287LBS/@@download/ENCFF287LBS.bigWig GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking ENCFF413LVA bigWig fold change over control ENCSR532EMP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF740-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF165STC, ENCFF680XQR, ENCFF694KHP 1982508925 ENCODE Processing Pipeline 642a53bc209a1ca08cf8cedeed96aace https://www.encodeproject.org/files/ENCFF413LVA/@@download/ENCFF413LVA.bigWig GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking ENCFF992JZU bigBed narrowPeak peaks ENCSR532EMP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF740-human ENCAB728YTO DNA False 2016-08-24 ENCODE 2 ENCFF385SWE 13023740 ENCODE Processing Pipeline 9e309e0ac3783c75faa59151ab1166f4 https://www.encodeproject.org/files/ENCFF992JZU/@@download/ENCFF992JZU.bigBed GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking ENCFF871DUH bigBed narrowPeak peaks ENCSR532EMP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF740-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF894OHV 13007133 ENCODE Processing Pipeline 03160417a15d6d603f4612680d22fe23 https://www.encodeproject.org/files/ENCFF871DUH/@@download/ENCFF871DUH.bigBed GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking ENCFF970WRP bed narrowPeak conservative idr thresholded peaks ENCSR532EMP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF740-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF222THM, ENCFF385SWE, ENCFF419RSJ, ENCFF894OHV 88583 ENCODE Processing Pipeline ac89010dd33b4372f59bfc4648a8ef6e https://www.encodeproject.org/files/ENCFF970WRP/@@download/ENCFF970WRP.bed.gz GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking ENCFF865OKF bed narrowPeak optimal idr thresholded peaks ENCSR532EMP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF740-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF222THM, ENCFF385SWE, ENCFF419RSJ, ENCFF894OHV 114417 ENCODE Processing Pipeline 51caa09eff3bc25c819286358f93a8e0 https://www.encodeproject.org/files/ENCFF865OKF/@@download/ENCFF865OKF.bed.gz GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking ENCFF375BIG bigBed narrowPeak optimal idr thresholded peaks ENCSR532EMP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF740-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF865OKF 339175 ENCODE Processing Pipeline 6dd438cc2133861c50a595ac881c2f17 https://www.encodeproject.org/files/ENCFF375BIG/@@download/ENCFF375BIG.bigBed GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking ENCFF369RMT bigBed narrowPeak peaks ENCSR532EMP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF740-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1 ENCFF222THM 13010465 ENCODE Processing Pipeline e3c87edba2238462eadf153925e1a8b3 https://www.encodeproject.org/files/ENCFF369RMT/@@download/ENCFF369RMT.bigBed GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking ENCFF899TCQ bigBed narrowPeak conservative idr thresholded peaks ENCSR532EMP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF740-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF970WRP 285351 ENCODE Processing Pipeline 7810c43adc1a95e1c13c1ddee15b8f7b https://www.encodeproject.org/files/ENCFF899TCQ/@@download/ENCFF899TCQ.bigBed GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking ENCFF222THM bed narrowPeak peaks ENCSR532EMP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF740-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1 ENCFF165STC, ENCFF680XQR 6997255 ENCODE Processing Pipeline 4b3663d1fdd04490087f068dfaafd16a https://www.encodeproject.org/files/ENCFF222THM/@@download/ENCFF222THM.bed.gz GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking ENCFF385SWE bed narrowPeak peaks ENCSR532EMP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF740-human ENCAB728YTO DNA False 2016-08-24 ENCODE 2 ENCFF680XQR, ENCFF694KHP 7179481 ENCODE Processing Pipeline f5d0c7b825c7ea06024088e686b61c36 https://www.encodeproject.org/files/ENCFF385SWE/@@download/ENCFF385SWE.bed.gz GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking ENCFF894OHV bed narrowPeak peaks ENCSR532EMP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF740-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF165STC, ENCFF680XQR, ENCFF694KHP 7378120 ENCODE Processing Pipeline 003a89f5c4e821d3a3a0130d1e63f5b1 https://www.encodeproject.org/files/ENCFF894OHV/@@download/ENCFF894OHV.bed.gz GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking ENCFF408JLD bam unfiltered alignments ENCSR542WJU ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM7-human ENCAB076QOB DNA False 2016-09-27 ENCODE 2 100 ENCFF121ACO, ENCFF250AVG, ENCFF807MUK 6450766557 ENCODE Processing Pipeline d775ab39078add6bc772ace879811e06 https://www.encodeproject.org/files/ENCFF408JLD/@@download/ENCFF408JLD.bam hg19 released ENCFF871FHN bam unfiltered alignments ENCSR542WJU ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM7-human ENCAB076QOB DNA False 2016-09-27 ENCODE 1 100 ENCFF640FTH, ENCFF807MUK, ENCFF909ZLD 6208155976 ENCODE Processing Pipeline f484dd435762e2fa4a4b5e897693865d https://www.encodeproject.org/files/ENCFF871FHN/@@download/ENCFF871FHN.bam hg19 released ENCFF250AVG fastq reads ENCSR542WJU ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM7-human ENCAB076QOB DNA False 2016-09-27 ENCODE 2 1 100 paired-ended 1 ENCFF121ACO 2931823045 Michael Snyder, Stanford 5b402356a3795993e6bdc80febd3de96 SRA:SRR5111777 https://www.encodeproject.org/files/ENCFF250AVG/@@download/ENCFF250AVG.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFF/ released ENCFF121ACO fastq reads ENCSR542WJU ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM7-human ENCAB076QOB DNA False 2016-09-27 ENCODE 2 1 100 paired-ended 2 ENCFF250AVG 2979421944 Michael Snyder, Stanford 8dbba304aa32ae5181e98ddbc6c51e5b SRA:SRR5111777 https://www.encodeproject.org/files/ENCFF121ACO/@@download/ENCFF121ACO.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFH/ released ENCFF909ZLD fastq reads ENCSR542WJU ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM7-human ENCAB076QOB DNA False 2016-09-27 ENCODE 1 1 100 paired-ended 2 ENCFF640FTH 2861324304 Michael Snyder, Stanford e825da0c92a58c43526a8d6385e1bb6c SRA:SRR5111776 https://www.encodeproject.org/files/ENCFF909ZLD/@@download/ENCFF909ZLD.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFH/ released ENCFF640FTH fastq reads ENCSR542WJU ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM7-human ENCAB076QOB DNA False 2016-09-27 ENCODE 1 1 100 paired-ended 1 ENCFF909ZLD 2813474986 Michael Snyder, Stanford 37a8282345c50f744397042513f3f484 SRA:SRR5111776 https://www.encodeproject.org/files/ENCFF640FTH/@@download/ENCFF640FTH.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFF/ released ENCFF477POF bam alignments ENCSR542WJU ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM7-human ENCAB076QOB DNA False 2016-09-27 ENCODE 1 100 ENCFF640FTH, ENCFF807MUK, ENCFF909ZLD 5369230695 ENCODE Processing Pipeline 3c78b00b850224652880b3d77f6c6c06 https://www.encodeproject.org/files/ENCFF477POF/@@download/ENCFF477POF.bam hg19 released ENCFF044ZGL bam alignments ENCSR542WJU ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM7-human ENCAB076QOB DNA False 2016-09-27 ENCODE 2 100 ENCFF121ACO, ENCFF250AVG, ENCFF807MUK 5618933179 ENCODE Processing Pipeline 562eac24a8607653fe8159053458b24d https://www.encodeproject.org/files/ENCFF044ZGL/@@download/ENCFF044ZGL.bam hg19 released ENCFF261CFW bigWig signal p-value ENCSR542WJU ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM7-human ENCAB076QOB DNA False 2016-09-27 ENCODE 1 ENCFF477POF, ENCFF581ZJL 1383926783 ENCODE Processing Pipeline 0845f5342bd7f781d63689dcc74ad4d2 https://www.encodeproject.org/files/ENCFF261CFW/@@download/ENCFF261CFW.bigWig hg19 released ENCFF366UUO bigWig signal p-value ENCSR542WJU ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM7-human ENCAB076QOB DNA False 2016-09-27 ENCODE 2 ENCFF044ZGL, ENCFF581ZJL 1082547957 ENCODE Processing Pipeline 173d54f80d51635f90ab087be2412c0f https://www.encodeproject.org/files/ENCFF366UUO/@@download/ENCFF366UUO.bigWig hg19 released ENCFF355LQH bigWig signal p-value ENCSR542WJU ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM7-human ENCAB076QOB DNA False 2016-09-27 ENCODE 1, 2 ENCFF044ZGL, ENCFF477POF, ENCFF581ZJL 1594281074 ENCODE Processing Pipeline 6418af1b27b34b0293e084f5d03089e4 https://www.encodeproject.org/files/ENCFF355LQH/@@download/ENCFF355LQH.bigWig hg19 released ENCFF184STM bigWig fold change over control ENCSR542WJU ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM7-human ENCAB076QOB DNA False 2016-09-27 ENCODE 1 ENCFF477POF, ENCFF581ZJL 1354759569 ENCODE Processing Pipeline dab5e87a12dae8066e1ec819debbd476 https://www.encodeproject.org/files/ENCFF184STM/@@download/ENCFF184STM.bigWig hg19 released ENCFF061AYO bigWig fold change over control ENCSR542WJU ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM7-human ENCAB076QOB DNA False 2016-09-27 ENCODE 2 ENCFF044ZGL, ENCFF581ZJL 1408917994 ENCODE Processing Pipeline 9cdf0cc5b86ea02f0289ddcafcec2041 https://www.encodeproject.org/files/ENCFF061AYO/@@download/ENCFF061AYO.bigWig hg19 released ENCFF028PQJ bigWig fold change over control ENCSR542WJU ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM7-human ENCAB076QOB DNA False 2016-09-27 ENCODE 1, 2 ENCFF044ZGL, ENCFF477POF, ENCFF581ZJL 2012055396 ENCODE Processing Pipeline a9996dfc38996d6998b8bada9b8769cc https://www.encodeproject.org/files/ENCFF028PQJ/@@download/ENCFF028PQJ.bigWig hg19 released ENCFF298ANN bed narrowPeak peaks ENCSR542WJU ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM7-human ENCAB076QOB DNA False 2016-09-27 ENCODE 1 ENCFF477POF, ENCFF581ZJL 6668549 ENCODE Processing Pipeline fe70ba76f997927a58faceef760078aa https://www.encodeproject.org/files/ENCFF298ANN/@@download/ENCFF298ANN.bed.gz hg19 released ENCFF165WWF bed narrowPeak peaks ENCSR542WJU ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM7-human ENCAB076QOB DNA False 2016-09-27 ENCODE 1, 2 ENCFF044ZGL, ENCFF477POF, ENCFF581ZJL 7146513 ENCODE Processing Pipeline b3641340d51f917d043e9927a3333d40 https://www.encodeproject.org/files/ENCFF165WWF/@@download/ENCFF165WWF.bed.gz hg19 released ENCFF232KWI bed narrowPeak peaks ENCSR542WJU ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM7-human ENCAB076QOB DNA False 2016-09-27 ENCODE 2 ENCFF044ZGL, ENCFF581ZJL 6647154 ENCODE Processing Pipeline e5d1fa786643f62b7da74009b2bb1f10 https://www.encodeproject.org/files/ENCFF232KWI/@@download/ENCFF232KWI.bed.gz hg19 released ENCFF225ESW bigBed narrowPeak peaks ENCSR542WJU ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM7-human ENCAB076QOB DNA False 2016-09-27 ENCODE 1 ENCFF298ANN 10992070 ENCODE Processing Pipeline 96fc72784029df3d000465f91b74f293 https://www.encodeproject.org/files/ENCFF225ESW/@@download/ENCFF225ESW.bigBed hg19 released ENCFF220FGA bigBed narrowPeak peaks ENCSR542WJU ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM7-human ENCAB076QOB DNA False 2016-09-27 ENCODE 1, 2 ENCFF165WWF 10797981 ENCODE Processing Pipeline 04a5d5e1c6a4cf919c97e4d85740a5cc https://www.encodeproject.org/files/ENCFF220FGA/@@download/ENCFF220FGA.bigBed hg19 released ENCFF793SGC bigBed narrowPeak peaks ENCSR542WJU ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM7-human ENCAB076QOB DNA False 2016-09-27 ENCODE 2 ENCFF232KWI 10996079 ENCODE Processing Pipeline 18d55f8ff99e5241cf93085303275018 https://www.encodeproject.org/files/ENCFF793SGC/@@download/ENCFF793SGC.bigBed hg19 released ENCFF552GJB bigBed narrowPeak conservative idr thresholded peaks ENCSR542WJU ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM7-human ENCAB076QOB DNA False 2016-09-27 ENCODE 1, 2 ENCFF005JRY 112151 ENCODE Processing Pipeline a3e4c6f2b512dd72fbeb9ac661e64c54 https://www.encodeproject.org/files/ENCFF552GJB/@@download/ENCFF552GJB.bigBed hg19 released ENCFF005JRY bed narrowPeak conservative idr thresholded peaks ENCSR542WJU ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM7-human ENCAB076QOB DNA False 2016-09-27 ENCODE 1, 2 ENCFF001TDO, ENCFF165WWF, ENCFF232KWI, ENCFF298ANN 23371 ENCODE Processing Pipeline c85968bec0af33dc24640b4fc9df21cc https://www.encodeproject.org/files/ENCFF005JRY/@@download/ENCFF005JRY.bed.gz hg19 released ENCFF278ONE bed narrowPeak optimal idr thresholded peaks ENCSR542WJU ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM7-human ENCAB076QOB DNA False 2016-09-27 ENCODE 1, 2 ENCFF001TDO, ENCFF165WWF, ENCFF232KWI, ENCFF298ANN 42864 ENCODE Processing Pipeline f001f8218fe092df94f9780e7635d9ad https://www.encodeproject.org/files/ENCFF278ONE/@@download/ENCFF278ONE.bed.gz hg19 released ENCFF663ESN bigBed narrowPeak optimal idr thresholded peaks ENCSR542WJU ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM7-human ENCAB076QOB DNA False 2016-09-27 ENCODE 1, 2 ENCFF278ONE 133527 ENCODE Processing Pipeline ea4760dba08f07f7ccca5174bf6da11a https://www.encodeproject.org/files/ENCFF663ESN/@@download/ENCFF663ESN.bigBed hg19 released ENCFF853ARE bam unfiltered alignments ENCSR542WJU ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM7-human ENCAB076QOB DNA False 2016-09-27 ENCODE 2 100 ENCFF121ACO, ENCFF250AVG, ENCFF643CGH 6459266090 ENCODE Processing Pipeline e1a5cf283f88459dd26ab0592a4dd9bc https://www.encodeproject.org/files/ENCFF853ARE/@@download/ENCFF853ARE.bam GRCh38 released ENCFF512QAY bam unfiltered alignments ENCSR542WJU ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM7-human ENCAB076QOB DNA False 2016-09-27 ENCODE 1 100 ENCFF640FTH, ENCFF643CGH, ENCFF909ZLD 6217656139 ENCODE Processing Pipeline 01af78e9db129759cda10b313b0aaa8d https://www.encodeproject.org/files/ENCFF512QAY/@@download/ENCFF512QAY.bam GRCh38 released ENCFF548AHK bam alignments ENCSR542WJU ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM7-human ENCAB076QOB DNA False 2016-09-27 ENCODE 2 100 ENCFF121ACO, ENCFF250AVG, ENCFF643CGH 5623323262 ENCODE Processing Pipeline 00dc0f654a02a86421b779c607fff0b3 https://www.encodeproject.org/files/ENCFF548AHK/@@download/ENCFF548AHK.bam GRCh38 released ENCFF995UTD bam alignments ENCSR542WJU ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM7-human ENCAB076QOB DNA False 2016-09-27 ENCODE 1 100 ENCFF640FTH, ENCFF643CGH, ENCFF909ZLD 5374974688 ENCODE Processing Pipeline 8ec98c581f861ae499a7c3cbd9c04557 https://www.encodeproject.org/files/ENCFF995UTD/@@download/ENCFF995UTD.bam GRCh38 released ENCFF815LSE bigWig signal p-value ENCSR542WJU ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM7-human ENCAB076QOB DNA False 2016-09-27 ENCODE 1 ENCFF910IKB, ENCFF995UTD 1316388610 ENCODE Processing Pipeline b937e796f1fef68ea968602a65e235ef https://www.encodeproject.org/files/ENCFF815LSE/@@download/ENCFF815LSE.bigWig GRCh38 released ENCFF262NRZ bigWig signal p-value ENCSR542WJU ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM7-human ENCAB076QOB DNA False 2016-09-27 ENCODE 2 ENCFF548AHK, ENCFF910IKB 1422606453 ENCODE Processing Pipeline 12b3a2e39427e89921bbfbcb8ae96cb1 https://www.encodeproject.org/files/ENCFF262NRZ/@@download/ENCFF262NRZ.bigWig GRCh38 released ENCFF591GIJ bigWig signal p-value ENCSR542WJU ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM7-human ENCAB076QOB DNA False 2016-09-27 ENCODE 1, 2 ENCFF548AHK, ENCFF910IKB, ENCFF995UTD 1585076228 ENCODE Processing Pipeline 011b32db465373152219074c16308feb https://www.encodeproject.org/files/ENCFF591GIJ/@@download/ENCFF591GIJ.bigWig GRCh38 released ENCFF103EIF bigWig fold change over control ENCSR542WJU ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM7-human ENCAB076QOB DNA False 2016-09-27 ENCODE 1 ENCFF910IKB, ENCFF995UTD 1372247189 ENCODE Processing Pipeline 51e6f79b72215654981ee6ba64a74671 https://www.encodeproject.org/files/ENCFF103EIF/@@download/ENCFF103EIF.bigWig GRCh38 released ENCFF003FMA bigWig fold change over control ENCSR542WJU ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM7-human ENCAB076QOB DNA False 2016-09-27 ENCODE 2 ENCFF548AHK, ENCFF910IKB 1402356102 ENCODE Processing Pipeline c4a026745cb1cf1c396170d9a649ec7b https://www.encodeproject.org/files/ENCFF003FMA/@@download/ENCFF003FMA.bigWig GRCh38 released ENCFF951YWA bigWig fold change over control ENCSR542WJU ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM7-human ENCAB076QOB DNA False 2016-09-27 ENCODE 1, 2 ENCFF548AHK, ENCFF910IKB, ENCFF995UTD 2005334697 ENCODE Processing Pipeline 1e1b6183743d7ba7d839a0e5bfdb6281 https://www.encodeproject.org/files/ENCFF951YWA/@@download/ENCFF951YWA.bigWig GRCh38 released ENCFF618NEQ bed narrowPeak peaks ENCSR542WJU ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM7-human ENCAB076QOB DNA False 2016-09-27 ENCODE 2 ENCFF548AHK, ENCFF910IKB 6513507 ENCODE Processing Pipeline 6093ae718a44b3866293c9d0522c3aa7 https://www.encodeproject.org/files/ENCFF618NEQ/@@download/ENCFF618NEQ.bed.gz GRCh38 released ENCFF035VLB bed narrowPeak peaks ENCSR542WJU ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM7-human ENCAB076QOB DNA False 2016-09-27 ENCODE 1, 2 ENCFF548AHK, ENCFF910IKB, ENCFF995UTD 7111942 ENCODE Processing Pipeline e82224471ac284faa2ab20ce48e402a2 https://www.encodeproject.org/files/ENCFF035VLB/@@download/ENCFF035VLB.bed.gz GRCh38 released ENCFF426EZS bigBed narrowPeak peaks ENCSR542WJU ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM7-human ENCAB076QOB DNA False 2016-09-27 ENCODE 2 ENCFF618NEQ 11005436 ENCODE Processing Pipeline 1a3fbe0919ba3d26a2aaf1b35082731f https://www.encodeproject.org/files/ENCFF426EZS/@@download/ENCFF426EZS.bigBed GRCh38 released ENCFF366DIZ bigBed narrowPeak peaks ENCSR542WJU ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM7-human ENCAB076QOB DNA False 2016-09-27 ENCODE 1, 2 ENCFF035VLB 10810112 ENCODE Processing Pipeline 636a7f20b4ce1271adb46bd774e3d89b https://www.encodeproject.org/files/ENCFF366DIZ/@@download/ENCFF366DIZ.bigBed GRCh38 released ENCFF240ALI bed narrowPeak peaks ENCSR542WJU ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM7-human ENCAB076QOB DNA False 2016-09-27 ENCODE 1 ENCFF910IKB, ENCFF995UTD 6537629 ENCODE Processing Pipeline 66ac6d94bdf1cff5e17c256d03cc79d5 https://www.encodeproject.org/files/ENCFF240ALI/@@download/ENCFF240ALI.bed.gz GRCh38 released ENCFF250NHM bed narrowPeak conservative idr thresholded peaks ENCSR542WJU ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM7-human ENCAB076QOB DNA False 2016-09-27 ENCODE 1, 2 ENCFF035VLB, ENCFF240ALI, ENCFF419RSJ, ENCFF618NEQ 20033 ENCODE Processing Pipeline 635a90ee36c0f77beb100d2f6e9d0c15 https://www.encodeproject.org/files/ENCFF250NHM/@@download/ENCFF250NHM.bed.gz GRCh38 released ENCFF104WKM bigBed narrowPeak conservative idr thresholded peaks ENCSR542WJU ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM7-human ENCAB076QOB DNA False 2016-09-27 ENCODE 1, 2 ENCFF250NHM 96420 ENCODE Processing Pipeline 745ed7f3c28a163745bf5572b7242fb6 https://www.encodeproject.org/files/ENCFF104WKM/@@download/ENCFF104WKM.bigBed GRCh38 released ENCFF288ZRD bed narrowPeak optimal idr thresholded peaks ENCSR542WJU ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM7-human ENCAB076QOB DNA False 2016-09-27 ENCODE 1, 2 ENCFF035VLB, ENCFF240ALI, ENCFF419RSJ, ENCFF618NEQ 38961 ENCODE Processing Pipeline a857aa4b2e3800fd7500c4f91739f432 https://www.encodeproject.org/files/ENCFF288ZRD/@@download/ENCFF288ZRD.bed.gz GRCh38 released ENCFF975ANM bigBed narrowPeak peaks ENCSR542WJU ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM7-human ENCAB076QOB DNA False 2016-09-27 ENCODE 1 ENCFF240ALI 11011675 ENCODE Processing Pipeline 5fda0e0e0d5c93e1d0d081ce3a9a5b97 https://www.encodeproject.org/files/ENCFF975ANM/@@download/ENCFF975ANM.bigBed GRCh38 released ENCFF737TIX bigBed narrowPeak optimal idr thresholded peaks ENCSR542WJU ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM7-human ENCAB076QOB DNA False 2016-09-27 ENCODE 1, 2 ENCFF288ZRD 130613 ENCODE Processing Pipeline 489c537a5e3d6e6207410b88dea9b251 https://www.encodeproject.org/files/ENCFF737TIX/@@download/ENCFF737TIX.bigBed GRCh38 released ENCFF000QAX bam alignments ENCSR000BMG ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC2-human ENCAB000AHJ DNA see document see document False 2011-07-18 ENCODE 1 ENCFF000QBF 461040459 Richard Myers, HAIB d53c42e03c723ac540e56a5f1193a944 https://www.encodeproject.org/files/ENCFF000QAX/@@download/ENCFF000QAX.bam hg19 archived control low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample poor library complexity, severe bottlenecking extremely low read depth ENCFF000QAY bigBed broadPeak peaks ENCSR000BMG ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC2-human ENCAB000AHJ DNA see document see document False 2011-07-18 ENCODE 1 1 ENCFF001UKD 541725 Richard Myers, HAIB ed0817ec90e1f65d8144954e4f881773 https://www.encodeproject.org/files/ENCFF000QAY/@@download/ENCFF000QAY.bigBed hg19 archived control low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample poor library complexity, severe bottlenecking extremely low read depth ENCFF000QAZ bigBed broadPeak peaks ENCSR000BMG ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC2-human ENCAB000AHJ DNA see document see document False 2011-07-18 ENCODE 2 1 ENCFF001UKE 232106 Richard Myers, HAIB 0d8d77ecebc607dc77ed6a93d70ff9bf https://www.encodeproject.org/files/ENCFF000QAZ/@@download/ENCFF000QAZ.bigBed hg19 archived control low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample poor library complexity, severe bottlenecking extremely low read depth ENCFF000QBA bam alignments ENCSR000BMG ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC2-human ENCAB000AHJ DNA see document see document False 2011-07-18 ENCODE 2 ENCFF000QBN 1362499051 Richard Myers, HAIB f8b51958aa98d32ffda8d3011a314c8e https://www.encodeproject.org/files/ENCFF000QBA/@@download/ENCFF000QBA.bam hg19 archived control low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample poor library complexity, severe bottlenecking extremely low read depth ENCFF000QBB bigWig raw signal ENCSR000BMG ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC2-human ENCAB000AHJ DNA see document see document False 2011-07-18 ENCODE 1 1 13966513 Richard Myers, HAIB 2ed5d2ae3b7739cb1df738f2e836b81f https://www.encodeproject.org/files/ENCFF000QBB/@@download/ENCFF000QBB.bigWig hg19 archived control low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample, missing derived_from poor library complexity, severe bottlenecking extremely low read depth ENCFF000QBE bigWig raw signal ENCSR000BMG ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC2-human ENCAB000AHJ DNA see document see document False 2011-07-18 ENCODE 2 1 16553009 Richard Myers, HAIB 07c6c923980f4df1d69bd1aafaabe99e https://www.encodeproject.org/files/ENCFF000QBE/@@download/ENCFF000QBE.bigWig hg19 archived control low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample, missing derived_from poor library complexity, severe bottlenecking extremely low read depth ENCFF000QBF fastq reads ENCSR000BMG ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC2-human ENCAB000AHJ DNA see document see document False 2011-07-18 ENCODE 1 1 36 single-ended 447759713 Richard Myers, HAIB b3ace8601ce551650564ee7d1108fb6e https://www.encodeproject.org/files/ENCFF000QBF/@@download/ENCFF000QBF.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000QET/ released control low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample poor library complexity, severe bottlenecking extremely low read depth ENCFF000QBN fastq reads ENCSR000BMG ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC2-human ENCAB000AHJ DNA see document see document False 2011-07-18 ENCODE 2 1 36 single-ended 1352172692 Richard Myers, HAIB c9a0a87687ad5a1b3bd8f963bfd76aaf https://www.encodeproject.org/files/ENCFF000QBN/@@download/ENCFF000QBN.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000QET/ released control low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample poor library complexity, severe bottlenecking extremely low read depth ENCFF001UKD bed broadPeak peaks ENCSR000BMG ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC2-human ENCAB000AHJ DNA see document see document False 2011-07-18 ENCODE 1 1 312252 Richard Myers, HAIB 482b6e50d699de0d87427a0233cf77c5 https://www.encodeproject.org/files/ENCFF001UKD/@@download/ENCFF001UKD.bed.gz hg19 archived control low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample, missing derived_from poor library complexity, severe bottlenecking extremely low read depth ENCFF001UKE bed broadPeak peaks ENCSR000BMG ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC2-human ENCAB000AHJ DNA see document see document False 2011-07-18 ENCODE 2 1 91965 Richard Myers, HAIB ac13d7762a01bf2f68690548a8da33ac https://www.encodeproject.org/files/ENCFF001UKE/@@download/ENCFF001UKE.bed.gz hg19 archived control low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample, missing derived_from poor library complexity, severe bottlenecking extremely low read depth ENCFF002CMB bed narrowPeak optimal idr thresholded peaks ENCSR000BMG ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC2-human ENCAB000AHJ DNA see document see document False 2011-07-18 ENCODE 128678 ENCODE Consortium Analysis Working Group fe645c91ac33d4e3222a007677d53650 https://www.encodeproject.org/files/ENCFF002CMB/@@download/ENCFF002CMB.bed.gz hg19 archived control low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample, missing derived_from poor library complexity, severe bottlenecking extremely low read depth ENCFF231XBJ bigBed narrowPeak optimal idr thresholded peaks ENCSR000BMG ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC2-human ENCAB000AHJ DNA see document see document False 2011-07-18 ENCODE ENCFF002CMB 300381 ENCODE Consortium 496ca2695cb7664b36b2857e39da240e https://www.encodeproject.org/files/ENCFF231XBJ/@@download/ENCFF231XBJ.bigBed hg19 archived control low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample poor library complexity, severe bottlenecking extremely low read depth ENCFF051OWD bam unfiltered alignments ENCSR000BMG ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC2-human ENCAB000AHJ DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000QBF, ENCFF643CGH 548159008 ENCODE Processing Pipeline 897598389cc9b3aba7a9e2288116e403 https://www.encodeproject.org/files/ENCFF051OWD/@@download/ENCFF051OWD.bam GRCh38 released control low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample poor library complexity, severe bottlenecking extremely low read depth ENCFF089JIC bam alignments ENCSR000BMG ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC2-human ENCAB000AHJ DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000QBF, ENCFF643CGH 186470025 ENCODE Processing Pipeline 7c10ea44ed47bb0c47334d1c8bd75412 https://www.encodeproject.org/files/ENCFF089JIC/@@download/ENCFF089JIC.bam GRCh38 released control low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample poor library complexity, severe bottlenecking extremely low read depth ENCFF329KMX bam unfiltered alignments ENCSR000BMG ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC2-human ENCAB000AHJ DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000QBN, ENCFF643CGH 1747565830 ENCODE Processing Pipeline 022970806714d2c5304f8278a7bcce66 https://www.encodeproject.org/files/ENCFF329KMX/@@download/ENCFF329KMX.bam GRCh38 released control low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample poor library complexity, severe bottlenecking extremely low read depth ENCFF445ONF bam alignments ENCSR000BMG ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC2-human ENCAB000AHJ DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000QBN, ENCFF643CGH 929183097 ENCODE Processing Pipeline aea0061108efa217a4245095fc978e5e https://www.encodeproject.org/files/ENCFF445ONF/@@download/ENCFF445ONF.bam GRCh38 released control low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample poor library complexity, severe bottlenecking extremely low read depth ENCFF522EVL bam unfiltered alignments ENCSR000BMG ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC2-human ENCAB000AHJ DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000QBF, ENCFF807MUK 546854667 ENCODE Processing Pipeline 1733ab6225a74082f202b1a70e8d969f https://www.encodeproject.org/files/ENCFF522EVL/@@download/ENCFF522EVL.bam hg19 released control low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample poor library complexity, severe bottlenecking extremely low read depth ENCFF223OSD bam alignments ENCSR000BMG ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC2-human ENCAB000AHJ DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000QBF, ENCFF807MUK 186675455 ENCODE Processing Pipeline 716cc41f3ddaa5e4b271843ab07be7d0 https://www.encodeproject.org/files/ENCFF223OSD/@@download/ENCFF223OSD.bam hg19 released control low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample poor library complexity, severe bottlenecking extremely low read depth ENCFF045IHR bam unfiltered alignments ENCSR000BMG ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC2-human ENCAB000AHJ DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000QBN, ENCFF807MUK 1741404837 ENCODE Processing Pipeline dcc2359a3136cb6eab09a2f32915f005 https://www.encodeproject.org/files/ENCFF045IHR/@@download/ENCFF045IHR.bam hg19 released control low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample poor library complexity, severe bottlenecking extremely low read depth ENCFF379XXZ bam alignments ENCSR000BMG ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC2-human ENCAB000AHJ DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000QBN, ENCFF807MUK 929699971 ENCODE Processing Pipeline 964a9d9f9ffdb00a58498f0dbcd5be60 https://www.encodeproject.org/files/ENCFF379XXZ/@@download/ENCFF379XXZ.bam hg19 released control low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample poor library complexity, severe bottlenecking extremely low read depth ENCFF271TQY bigWig signal p-value ENCSR000BMG ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC2-human ENCAB000AHJ DNA see document see document False 2011-07-18 ENCODE 1 ENCFF089JIC, ENCFF913HVS 342995693 ENCODE Processing Pipeline f687b28509cbac5da346ed64eb3cbbc2 https://www.encodeproject.org/files/ENCFF271TQY/@@download/ENCFF271TQY.bigWig GRCh38 released control low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample poor library complexity, severe bottlenecking extremely low read depth ENCFF585CHH bigWig signal p-value ENCSR000BMG ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC2-human ENCAB000AHJ DNA see document see document False 2011-07-18 ENCODE 2 ENCFF445ONF, ENCFF913HVS 468601388 ENCODE Processing Pipeline a5f8f250227b47facd8cd9cfc973c785 https://www.encodeproject.org/files/ENCFF585CHH/@@download/ENCFF585CHH.bigWig GRCh38 released control low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample poor library complexity, severe bottlenecking extremely low read depth ENCFF610LSY bigWig signal p-value ENCSR000BMG ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC2-human ENCAB000AHJ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF089JIC, ENCFF445ONF, ENCFF913HVS 478026052 ENCODE Processing Pipeline 6d23cb97eb61a74d7616c07778678bc2 https://www.encodeproject.org/files/ENCFF610LSY/@@download/ENCFF610LSY.bigWig GRCh38 released control low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample poor library complexity, severe bottlenecking extremely low read depth ENCFF888SDP bigWig fold change over control ENCSR000BMG ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC2-human ENCAB000AHJ DNA see document see document False 2011-07-18 ENCODE 1 ENCFF089JIC, ENCFF913HVS 104124734 ENCODE Processing Pipeline 491770c5d52448c9786fe9568e3c7704 https://www.encodeproject.org/files/ENCFF888SDP/@@download/ENCFF888SDP.bigWig GRCh38 released control low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample poor library complexity, severe bottlenecking extremely low read depth ENCFF486GYP bigWig fold change over control ENCSR000BMG ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC2-human ENCAB000AHJ DNA see document see document False 2011-07-18 ENCODE 2 ENCFF445ONF, ENCFF913HVS 402274321 ENCODE Processing Pipeline 2541ca2081557f02836c6e787156dc79 https://www.encodeproject.org/files/ENCFF486GYP/@@download/ENCFF486GYP.bigWig GRCh38 released control low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample poor library complexity, severe bottlenecking extremely low read depth ENCFF661GQI bigBed narrowPeak peaks ENCSR000BMG ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC2-human ENCAB000AHJ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF855WTK 10919322 ENCODE Processing Pipeline 2bb02ae73bd10c33a8cab61b807c56f2 https://www.encodeproject.org/files/ENCFF661GQI/@@download/ENCFF661GQI.bigBed GRCh38 released control low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample poor library complexity, severe bottlenecking extremely low read depth ENCFF190SJX bed narrowPeak conservative idr thresholded peaks ENCSR000BMG ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC2-human ENCAB000AHJ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF419RSJ, ENCFF549VQK, ENCFF843QGK, ENCFF855WTK 95504 ENCODE Processing Pipeline aee56f6071193cdb13457954e3c5612d https://www.encodeproject.org/files/ENCFF190SJX/@@download/ENCFF190SJX.bed.gz GRCh38 released control low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample poor library complexity, severe bottlenecking extremely low read depth ENCFF855WTK bed narrowPeak peaks ENCSR000BMG ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC2-human ENCAB000AHJ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF089JIC, ENCFF445ONF, ENCFF913HVS 5089601 ENCODE Processing Pipeline 6b47f982246effb83d4ad78fc9fc45d3 https://www.encodeproject.org/files/ENCFF855WTK/@@download/ENCFF855WTK.bed.gz GRCh38 released control low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample poor library complexity, severe bottlenecking extremely low read depth ENCFF797HUI bigBed narrowPeak conservative idr thresholded peaks ENCSR000BMG ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC2-human ENCAB000AHJ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF190SJX 205738 ENCODE Processing Pipeline 53685880700ed765d8873d43d4a16d9f https://www.encodeproject.org/files/ENCFF797HUI/@@download/ENCFF797HUI.bigBed GRCh38 released control low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample poor library complexity, severe bottlenecking extremely low read depth ENCFF741IMY bed narrowPeak optimal idr thresholded peaks ENCSR000BMG ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC2-human ENCAB000AHJ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF419RSJ, ENCFF549VQK, ENCFF843QGK, ENCFF855WTK 165026 ENCODE Processing Pipeline 15bb764a113181237eaeb47dc5b28201 https://www.encodeproject.org/files/ENCFF741IMY/@@download/ENCFF741IMY.bed.gz GRCh38 released control low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample poor library complexity, severe bottlenecking extremely low read depth ENCFF549VQK bed narrowPeak peaks ENCSR000BMG ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC2-human ENCAB000AHJ DNA see document see document False 2011-07-18 ENCODE 1 ENCFF089JIC, ENCFF913HVS 2721328 ENCODE Processing Pipeline a02132237098f2203b653a5f2fc3d39d https://www.encodeproject.org/files/ENCFF549VQK/@@download/ENCFF549VQK.bed.gz GRCh38 released control low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample poor library complexity, severe bottlenecking extremely low read depth ENCFF574XDI bigBed narrowPeak peaks ENCSR000BMG ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC2-human ENCAB000AHJ DNA see document see document False 2011-07-18 ENCODE 1 ENCFF549VQK 6177009 ENCODE Processing Pipeline 78efa49b57336f5d5dcbc1dd2ed2e8a7 https://www.encodeproject.org/files/ENCFF574XDI/@@download/ENCFF574XDI.bigBed GRCh38 released control low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample poor library complexity, severe bottlenecking extremely low read depth ENCFF843QGK bed narrowPeak peaks ENCSR000BMG ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC2-human ENCAB000AHJ DNA see document see document False 2011-07-18 ENCODE 2 ENCFF445ONF, ENCFF913HVS 4381672 ENCODE Processing Pipeline c77f0375d783c86183330629b0893b20 https://www.encodeproject.org/files/ENCFF843QGK/@@download/ENCFF843QGK.bed.gz GRCh38 released control low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample poor library complexity, severe bottlenecking extremely low read depth ENCFF333RXK bigBed narrowPeak peaks ENCSR000BMG ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC2-human ENCAB000AHJ DNA see document see document False 2011-07-18 ENCODE 2 ENCFF843QGK 10692581 ENCODE Processing Pipeline 2161b9602d88eb1ef6ffd5423f3406e5 https://www.encodeproject.org/files/ENCFF333RXK/@@download/ENCFF333RXK.bigBed GRCh38 released control low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample poor library complexity, severe bottlenecking extremely low read depth ENCFF797QCQ bigWig fold change over control ENCSR000BMG ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC2-human ENCAB000AHJ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF089JIC, ENCFF445ONF, ENCFF913HVS 467470049 ENCODE Processing Pipeline 04fdcd38eccea40f496387dfab2c9bc6 https://www.encodeproject.org/files/ENCFF797QCQ/@@download/ENCFF797QCQ.bigWig GRCh38 released control low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample poor library complexity, severe bottlenecking extremely low read depth ENCFF682PLY bigBed narrowPeak optimal idr thresholded peaks ENCSR000BMG ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC2-human ENCAB000AHJ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF741IMY 350323 ENCODE Processing Pipeline 9cbfa8f95faa970909fc2b00099d365a https://www.encodeproject.org/files/ENCFF682PLY/@@download/ENCFF682PLY.bigBed GRCh38 released control low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample poor library complexity, severe bottlenecking extremely low read depth ENCFF381RFT bigWig signal p-value ENCSR000BMG ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC2-human ENCAB000AHJ DNA see document see document False 2011-07-18 ENCODE 1 ENCFF223OSD, ENCFF701KUD 304981874 ENCODE Processing Pipeline 665d541fe382854b0981a48dfd2acc79 https://www.encodeproject.org/files/ENCFF381RFT/@@download/ENCFF381RFT.bigWig hg19 released control low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample poor library complexity, severe bottlenecking extremely low read depth ENCFF690AHJ bigWig fold change over control ENCSR000BMG ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC2-human ENCAB000AHJ DNA see document see document False 2011-07-18 ENCODE 1 ENCFF223OSD, ENCFF701KUD 104097676 ENCODE Processing Pipeline d5eb5ae7dc2eb63a94348ea3896aa227 https://www.encodeproject.org/files/ENCFF690AHJ/@@download/ENCFF690AHJ.bigWig hg19 released control low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample poor library complexity, severe bottlenecking extremely low read depth ENCFF665LTH bigWig signal p-value ENCSR000BMG ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC2-human ENCAB000AHJ DNA see document see document False 2011-07-18 ENCODE 2 ENCFF379XXZ, ENCFF701KUD 468896595 ENCODE Processing Pipeline 1f0e22e836011539d517d502c39924b5 https://www.encodeproject.org/files/ENCFF665LTH/@@download/ENCFF665LTH.bigWig hg19 released control low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample poor library complexity, severe bottlenecking extremely low read depth ENCFF584FVS bigWig signal p-value ENCSR000BMG ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC2-human ENCAB000AHJ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF223OSD, ENCFF379XXZ, ENCFF701KUD 476887754 ENCODE Processing Pipeline f013f133580827516599a1b357aaa205 https://www.encodeproject.org/files/ENCFF584FVS/@@download/ENCFF584FVS.bigWig hg19 released control low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample poor library complexity, severe bottlenecking extremely low read depth ENCFF699LAX bigWig fold change over control ENCSR000BMG ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC2-human ENCAB000AHJ DNA see document see document False 2011-07-18 ENCODE 2 ENCFF379XXZ, ENCFF701KUD 402236508 ENCODE Processing Pipeline a0f4b4dcfbc54ec79bebb35da4e64c1d https://www.encodeproject.org/files/ENCFF699LAX/@@download/ENCFF699LAX.bigWig hg19 released control low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample poor library complexity, severe bottlenecking extremely low read depth ENCFF002SNM bigWig fold change over control ENCSR000BMG ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC2-human ENCAB000AHJ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF223OSD, ENCFF379XXZ, ENCFF701KUD 462900642 ENCODE Processing Pipeline e33fde0d834b5b6f336af6ad8ca0506a https://www.encodeproject.org/files/ENCFF002SNM/@@download/ENCFF002SNM.bigWig hg19 released control low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample poor library complexity, severe bottlenecking extremely low read depth ENCFF735NAF bed narrowPeak peaks ENCSR000BMG ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC2-human ENCAB000AHJ DNA see document see document False 2011-07-18 ENCODE 1 ENCFF223OSD, ENCFF701KUD 2621077 ENCODE Processing Pipeline 2a64b523b1acf836ce4e073673ed2e2c https://www.encodeproject.org/files/ENCFF735NAF/@@download/ENCFF735NAF.bed.gz hg19 released control low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample poor library complexity, severe bottlenecking extremely low read depth ENCFF336UZW bed narrowPeak peaks ENCSR000BMG ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC2-human ENCAB000AHJ DNA see document see document False 2011-07-18 ENCODE 2 ENCFF379XXZ, ENCFF701KUD 4384689 ENCODE Processing Pipeline f9bf48178659d146a8e8aa48aae8e4c9 https://www.encodeproject.org/files/ENCFF336UZW/@@download/ENCFF336UZW.bed.gz hg19 released control low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample poor library complexity, severe bottlenecking extremely low read depth ENCFF246ENE bed narrowPeak peaks ENCSR000BMG ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC2-human ENCAB000AHJ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF223OSD, ENCFF379XXZ, ENCFF701KUD 5090337 ENCODE Processing Pipeline 75f9045a738cef7943860b97401736a8 https://www.encodeproject.org/files/ENCFF246ENE/@@download/ENCFF246ENE.bed.gz hg19 released control low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample poor library complexity, severe bottlenecking extremely low read depth ENCFF062DAE bigBed narrowPeak peaks ENCSR000BMG ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC2-human ENCAB000AHJ DNA see document see document False 2011-07-18 ENCODE 1 ENCFF735NAF 5953970 ENCODE Processing Pipeline ab39c0e3e264c2e043609aa135eb595a https://www.encodeproject.org/files/ENCFF062DAE/@@download/ENCFF062DAE.bigBed hg19 released control low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample poor library complexity, severe bottlenecking extremely low read depth ENCFF897MUT bigBed narrowPeak peaks ENCSR000BMG ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC2-human ENCAB000AHJ DNA see document see document False 2011-07-18 ENCODE 2 ENCFF336UZW 10709958 ENCODE Processing Pipeline 84f45fbefa2d511cab22eec31a2fd821 https://www.encodeproject.org/files/ENCFF897MUT/@@download/ENCFF897MUT.bigBed hg19 released control low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample poor library complexity, severe bottlenecking extremely low read depth ENCFF189ZAI bigBed narrowPeak peaks ENCSR000BMG ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC2-human ENCAB000AHJ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF246ENE 10913615 ENCODE Processing Pipeline 59566f2d1ab21c686356562c2766d938 https://www.encodeproject.org/files/ENCFF189ZAI/@@download/ENCFF189ZAI.bigBed hg19 released control low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample poor library complexity, severe bottlenecking extremely low read depth ENCFF809VBW bed narrowPeak conservative idr thresholded peaks ENCSR000BMG ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC2-human ENCAB000AHJ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF001TDO, ENCFF246ENE, ENCFF336UZW, ENCFF735NAF 95577 ENCODE Processing Pipeline 5f2885e39e622a512f5b91b19171ba4d https://www.encodeproject.org/files/ENCFF809VBW/@@download/ENCFF809VBW.bed.gz hg19 released control low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample poor library complexity, severe bottlenecking extremely low read depth ENCFF074FEW bigBed narrowPeak conservative idr thresholded peaks ENCSR000BMG ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC2-human ENCAB000AHJ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF809VBW 205249 ENCODE Processing Pipeline 4a13b7350a70da7be3515ea1991e42cf https://www.encodeproject.org/files/ENCFF074FEW/@@download/ENCFF074FEW.bigBed hg19 released control low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample poor library complexity, severe bottlenecking extremely low read depth ENCFF667HLC bed narrowPeak optimal idr thresholded peaks ENCSR000BMG ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC2-human ENCAB000AHJ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF001TDO, ENCFF246ENE, ENCFF336UZW, ENCFF735NAF 160465 ENCODE Processing Pipeline ee3222ea4ba9e0e28d04252bf3caeb15 https://www.encodeproject.org/files/ENCFF667HLC/@@download/ENCFF667HLC.bed.gz hg19 released control low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample poor library complexity, severe bottlenecking extremely low read depth ENCFF913WUJ bigBed narrowPeak optimal idr thresholded peaks ENCSR000BMG ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC2-human ENCAB000AHJ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF667HLC 343595 ENCODE Processing Pipeline 7e1b320bde50986ab7d3721c722450e0 https://www.encodeproject.org/files/ENCFF913WUJ/@@download/ENCFF913WUJ.bigBed hg19 released control low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample poor library complexity, severe bottlenecking extremely low read depth ENCFF000YMH bam alignments ENCSR000EWJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F6-human ENCAB000AFW DNA see document see document False 2011-10-29 ENCODE 1 ENCFF000YNL 598792361 Peggy Farnham, USC 7e624d121cfea14d7994a48de3d718af https://www.encodeproject.org/files/ENCFF000YMH/@@download/ENCFF000YMH.bam hg19 archived mixed read lengths biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth ENCFF000YMJ bigBed narrowPeak peaks ENCSR000EWJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F6-human ENCAB000AFW DNA see document see document False 2011-10-29 ENCODE ENCFF001VNA 741957 Peggy Farnham, USC b733c17ee4bba923bc1b079e2b6a5247 https://www.encodeproject.org/files/ENCFF000YMJ/@@download/ENCFF000YMJ.bigBed hg19 archived mixed read lengths biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth ENCFF000YMK bigWig signal ENCSR000EWJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F6-human ENCAB000AFW DNA see document see document False 2011-10-29 ENCODE 277437790 Peggy Farnham, USC d34760c355ad4151b7ac810b301a8c62 https://www.encodeproject.org/files/ENCFF000YMK/@@download/ENCFF000YMK.bigWig hg19 archived mixed read lengths biological replicates with identical biosample, missing derived_from insufficient read length, insufficient read depth extremely low read depth ENCFF000YML bam alignments ENCSR000EWJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F6-human ENCAB000AFW DNA see document see document False 2011-10-29 ENCODE 2 ENCFF000YMU 1335975278 Peggy Farnham, USC a69d9d6fe265873ab3785a767047cff0 https://www.encodeproject.org/files/ENCFF000YML/@@download/ENCFF000YML.bam hg19 archived mixed read lengths biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth ENCFF000YMU fastq reads ENCSR000EWJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F6-human ENCAB000AFW DNA see document see document False 2011-10-29 ENCODE 2 1 32 single-ended 1251419696 Peggy Farnham, USC 72dc3a9ce9cbf00af7ccb5629943c4f2 https://www.encodeproject.org/files/ENCFF000YMU/@@download/ENCFF000YMU.fastq.gz Illumina Genome Analyzer /files/ENCFF000VEK/ released mixed read lengths, inconsistent control read length biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth ENCFF000YNL fastq reads ENCSR000EWJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F6-human ENCAB000AFW DNA see document see document False 2011-10-29 ENCODE 1 1 27 single-ended 527664406 Peggy Farnham, USC 9798741cd0cf895e87a28d2030c0184e https://www.encodeproject.org/files/ENCFF000YNL/@@download/ENCFF000YNL.fastq.gz Illumina Genome Analyzer /files/ENCFF000VEK/ released mixed read lengths biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth ENCFF001VNA bed narrowPeak peaks ENCSR000EWJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F6-human ENCAB000AFW DNA see document see document False 2011-10-29 ENCODE 277843 Peggy Farnham, USC a4e704534e23245c58a832ba1a0b0fba https://www.encodeproject.org/files/ENCFF001VNA/@@download/ENCFF001VNA.bed.gz hg19 archived mixed read lengths biological replicates with identical biosample, missing derived_from insufficient read length, insufficient read depth extremely low read depth ENCFF002CWN bed narrowPeak optimal idr thresholded peaks ENCSR000EWJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F6-human ENCAB000AFW DNA see document see document False 2011-10-29 ENCODE 329444 ENCODE Consortium Analysis Working Group 9c3ea2d112c24d36793fd987ed9494a1 https://www.encodeproject.org/files/ENCFF002CWN/@@download/ENCFF002CWN.bed.gz hg19 archived mixed read lengths biological replicates with identical biosample, missing derived_from insufficient read length, insufficient read depth extremely low read depth ENCFF120DDR bigBed narrowPeak optimal idr thresholded peaks ENCSR000EWJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F6-human ENCAB000AFW DNA see document see document False 2011-10-29 ENCODE ENCFF002CWN 753502 ENCODE Consortium aea0fb5c3e8dc2c61356917d30f3551a https://www.encodeproject.org/files/ENCFF120DDR/@@download/ENCFF120DDR.bigBed hg19 archived mixed read lengths biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth ENCFF122WQM bam unfiltered alignments ENCSR000EWJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F6-human ENCAB000AFW DNA see document see document False 2011-10-29 ENCODE 1 27 ENCFF000YNL, ENCFF643CGH 600176664 ENCODE Processing Pipeline ae08755663c0d23bfc45f6d7ccdcce77 https://www.encodeproject.org/files/ENCFF122WQM/@@download/ENCFF122WQM.bam GRCh38 released mixed read lengths biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth ENCFF501SRH bed narrowPeak peaks ENCSR000EWJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F6-human ENCAB000AFW DNA see document see document False 2011-10-29 ENCODE 2 ENCFF011OSI, ENCFF355SGP 2993269 ENCODE Processing Pipeline 14edf18611fec3f25451a77a3fd92f18 https://www.encodeproject.org/files/ENCFF501SRH/@@download/ENCFF501SRH.bed.gz GRCh38 released mixed read lengths biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth ENCFF346FIZ bigBed narrowPeak peaks ENCSR000EWJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F6-human ENCAB000AFW DNA see document see document False 2011-10-29 ENCODE 1 ENCFF392DVF 3384647 ENCODE Processing Pipeline 8eeaeed9618a08d70f17925751a8f9cb https://www.encodeproject.org/files/ENCFF346FIZ/@@download/ENCFF346FIZ.bigBed GRCh38 released mixed read lengths biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth ENCFF201BQU bam alignments ENCSR000EWJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F6-human ENCAB000AFW DNA see document see document False 2011-10-29 ENCODE 1 27 ENCFF000YNL, ENCFF643CGH 165940979 ENCODE Processing Pipeline 3839600721b721fe30f0f7b19ac61b5a https://www.encodeproject.org/files/ENCFF201BQU/@@download/ENCFF201BQU.bam GRCh38 released mixed read lengths biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth ENCFF591ESQ bam unfiltered alignments ENCSR000EWJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F6-human ENCAB000AFW DNA see document see document False 2011-10-29 ENCODE 2 32 ENCFF000YMU, ENCFF643CGH 1337384440 ENCODE Processing Pipeline 0fe54049dbfd1be0eec617ea57c9722f https://www.encodeproject.org/files/ENCFF591ESQ/@@download/ENCFF591ESQ.bam GRCh38 released mixed read lengths biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth ENCFF011OSI bam alignments ENCSR000EWJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F6-human ENCAB000AFW DNA see document see document False 2011-10-29 ENCODE 2 32 ENCFF000YMU, ENCFF643CGH 253786958 ENCODE Processing Pipeline a2ce3a9d9ecf2d7a161914dc1fc4cf78 https://www.encodeproject.org/files/ENCFF011OSI/@@download/ENCFF011OSI.bam GRCh38 released mixed read lengths biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth ENCFF709CMG bigWig signal p-value ENCSR000EWJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F6-human ENCAB000AFW DNA see document see document False 2011-10-29 ENCODE 1 ENCFF201BQU, ENCFF355SGP 364852544 ENCODE Processing Pipeline c07d5fca2658edc7eca989d5c995fb24 https://www.encodeproject.org/files/ENCFF709CMG/@@download/ENCFF709CMG.bigWig GRCh38 released mixed read lengths biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth ENCFF313REA bigWig signal p-value ENCSR000EWJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F6-human ENCAB000AFW DNA see document see document False 2011-10-29 ENCODE 2 ENCFF011OSI, ENCFF355SGP 331080766 ENCODE Processing Pipeline 2f87d82772571d3557d4deb3a84a637c https://www.encodeproject.org/files/ENCFF313REA/@@download/ENCFF313REA.bigWig GRCh38 released mixed read lengths biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth ENCFF937GEV bigWig signal p-value ENCSR000EWJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F6-human ENCAB000AFW DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF011OSI, ENCFF201BQU, ENCFF355SGP 398327451 ENCODE Processing Pipeline 13ad41c4debe4bb051f72c10ccbba80d https://www.encodeproject.org/files/ENCFF937GEV/@@download/ENCFF937GEV.bigWig GRCh38 released mixed read lengths biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth ENCFF987XQM bigWig fold change over control ENCSR000EWJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F6-human ENCAB000AFW DNA see document see document False 2011-10-29 ENCODE 1 ENCFF201BQU, ENCFF355SGP 91281100 ENCODE Processing Pipeline 514dcbdb2b8272e9b2172b2e4b8d2a50 https://www.encodeproject.org/files/ENCFF987XQM/@@download/ENCFF987XQM.bigWig GRCh38 released mixed read lengths biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth ENCFF095EQZ bigWig fold change over control ENCSR000EWJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F6-human ENCAB000AFW DNA see document see document False 2011-10-29 ENCODE 2 ENCFF011OSI, ENCFF355SGP 127889978 ENCODE Processing Pipeline 87dbc9591182784e644f2101bcfb488a https://www.encodeproject.org/files/ENCFF095EQZ/@@download/ENCFF095EQZ.bigWig GRCh38 released mixed read lengths biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth ENCFF999BQQ bigWig fold change over control ENCSR000EWJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F6-human ENCAB000AFW DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF011OSI, ENCFF201BQU, ENCFF355SGP 200321644 ENCODE Processing Pipeline dabe88096080b594e2a300549a709017 https://www.encodeproject.org/files/ENCFF999BQQ/@@download/ENCFF999BQQ.bigWig GRCh38 released mixed read lengths biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth ENCFF392DVF bed narrowPeak peaks ENCSR000EWJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F6-human ENCAB000AFW DNA see document see document False 2011-10-29 ENCODE 1 ENCFF201BQU, ENCFF355SGP 1478898 ENCODE Processing Pipeline 663b837a5222df48534f58f06a885bad https://www.encodeproject.org/files/ENCFF392DVF/@@download/ENCFF392DVF.bed.gz GRCh38 released mixed read lengths biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth ENCFF130WXB bed narrowPeak peaks ENCSR000EWJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F6-human ENCAB000AFW DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF011OSI, ENCFF201BQU, ENCFF355SGP 4831147 ENCODE Processing Pipeline 0f01d85d24e2b4841031c9c0c354a60c https://www.encodeproject.org/files/ENCFF130WXB/@@download/ENCFF130WXB.bed.gz GRCh38 released mixed read lengths biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth ENCFF745YAT bigBed narrowPeak peaks ENCSR000EWJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F6-human ENCAB000AFW DNA see document see document False 2011-10-29 ENCODE 2 ENCFF501SRH 7357386 ENCODE Processing Pipeline ebfbe62c445824f84b5002a6c57c6afe https://www.encodeproject.org/files/ENCFF745YAT/@@download/ENCFF745YAT.bigBed GRCh38 released mixed read lengths biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth ENCFF928KNI bigBed narrowPeak peaks ENCSR000EWJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F6-human ENCAB000AFW DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF130WXB 11906694 ENCODE Processing Pipeline 075e95c5fa0a46ef317a7b0b94832ec5 https://www.encodeproject.org/files/ENCFF928KNI/@@download/ENCFF928KNI.bigBed GRCh38 released mixed read lengths biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth ENCFF680USG bed narrowPeak conservative idr thresholded peaks ENCSR000EWJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F6-human ENCAB000AFW DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF130WXB, ENCFF392DVF, ENCFF419RSJ, ENCFF501SRH 299097 ENCODE Processing Pipeline 82611841a58d057a06473ce71cae3963 https://www.encodeproject.org/files/ENCFF680USG/@@download/ENCFF680USG.bed.gz GRCh38 released mixed read lengths biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth ENCFF062MMM bigBed narrowPeak conservative idr thresholded peaks ENCSR000EWJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F6-human ENCAB000AFW DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF680USG 698649 ENCODE Processing Pipeline 9baf4c67a62f5ff15f9b5859759e29eb https://www.encodeproject.org/files/ENCFF062MMM/@@download/ENCFF062MMM.bigBed GRCh38 released mixed read lengths biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth ENCFF417DTI bed narrowPeak optimal idr thresholded peaks ENCSR000EWJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F6-human ENCAB000AFW DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF130WXB, ENCFF392DVF, ENCFF419RSJ, ENCFF501SRH 335871 ENCODE Processing Pipeline 85481cde4239ba77168c9dff2e3fa9cb https://www.encodeproject.org/files/ENCFF417DTI/@@download/ENCFF417DTI.bed.gz GRCh38 released mixed read lengths biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth ENCFF952DHP bigBed narrowPeak optimal idr thresholded peaks ENCSR000EWJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F6-human ENCAB000AFW DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF417DTI 763574 ENCODE Processing Pipeline 5064f3b04a0425d519c8a127a73ac7b4 https://www.encodeproject.org/files/ENCFF952DHP/@@download/ENCFF952DHP.bigBed GRCh38 released mixed read lengths biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth ENCFF395EZM bam unfiltered alignments ENCSR000EWJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F6-human ENCAB000AFW DNA see document see document False 2011-10-29 ENCODE 2 32 ENCFF000YMU, ENCFF807MUK 1336379242 ENCODE Processing Pipeline 861d1d0fb1641d0b50f3046bc1d9a3ad https://www.encodeproject.org/files/ENCFF395EZM/@@download/ENCFF395EZM.bam hg19 released mixed read lengths biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth ENCFF718DBH bam unfiltered alignments ENCSR000EWJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F6-human ENCAB000AFW DNA see document see document False 2011-10-29 ENCODE 1 27 ENCFF000YNL, ENCFF807MUK 599474503 ENCODE Processing Pipeline 4c720881211197132e118830d4d2630d https://www.encodeproject.org/files/ENCFF718DBH/@@download/ENCFF718DBH.bam hg19 released mixed read lengths biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth ENCFF313VTI bam alignments ENCSR000EWJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F6-human ENCAB000AFW DNA see document see document False 2011-10-29 ENCODE 2 32 ENCFF000YMU, ENCFF807MUK 253956205 ENCODE Processing Pipeline f5f5d2fed0779ee767bf4a269a0810d6 https://www.encodeproject.org/files/ENCFF313VTI/@@download/ENCFF313VTI.bam hg19 released mixed read lengths biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth ENCFF473XML bam alignments ENCSR000EWJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F6-human ENCAB000AFW DNA see document see document False 2011-10-29 ENCODE 1 27 ENCFF000YNL, ENCFF807MUK 166185559 ENCODE Processing Pipeline 140ab1479d9fa2a9918ee0336b0f190f https://www.encodeproject.org/files/ENCFF473XML/@@download/ENCFF473XML.bam hg19 released mixed read lengths biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth ENCFF000YPV bam alignments ENCSR000EHN ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCB1-human ENCAB000AHW DNA see document see document False 2011-10-29 ENCODE 1 ENCFF000YQK 683240789 Michael Snyder, Stanford 11957a8ad639ab8aa4482c13ebc38989 https://www.encodeproject.org/files/ENCFF000YPV/@@download/ENCFF000YPV.bam hg19 archived borderline replicate concordance, low read depth, inconsistent target of control experiment biological replicates with identical biosample insufficient read length ENCFF000YPX bigBed narrowPeak peaks ENCSR000EHN ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCB1-human ENCAB000AHW DNA see document see document False 2011-10-29 ENCODE ENCFF001VNJ 87156 Michael Snyder, Stanford 10c3fbb1b68c5836ffe013f2b1577378 https://www.encodeproject.org/files/ENCFF000YPX/@@download/ENCFF000YPX.bigBed hg19 archived borderline replicate concordance, low read depth, inconsistent target of control experiment biological replicates with identical biosample insufficient read length ENCFF000YPY bam alignments ENCSR000EHN ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCB1-human ENCAB000AHW DNA see document see document False 2011-10-29 ENCODE 2 ENCFF000YQL 702413070 Michael Snyder, Stanford 71dfb1c517cc8965af2141aa99ab81ab https://www.encodeproject.org/files/ENCFF000YPY/@@download/ENCFF000YPY.bam hg19 archived borderline replicate concordance, low read depth, inconsistent target of control experiment biological replicates with identical biosample insufficient read length ENCFF000YQA bigWig signal ENCSR000EHN ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCB1-human ENCAB000AHW DNA see document see document False 2011-10-29 ENCODE 442799093 Michael Snyder, Stanford 5ab67c5c954e2623f5f613998224946d https://www.encodeproject.org/files/ENCFF000YQA/@@download/ENCFF000YQA.bigWig hg19 archived borderline replicate concordance, low read depth, inconsistent target of control experiment biological replicates with identical biosample, missing derived_from insufficient read length ENCFF000YQK fastq reads ENCSR000EHN ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCB1-human ENCAB000AHW DNA see document see document False 2011-10-29 ENCODE 1 1 28 single-ended 532913313 Michael Snyder, Stanford 7c338ce6000baf4383d808b4708160da https://www.encodeproject.org/files/ENCFF000YQK/@@download/ENCFF000YQK.fastq.gz Illumina Genome Analyzer /files/ENCFF000YQB/ released borderline replicate concordance, low read depth, inconsistent target of control experiment biological replicates with identical biosample insufficient read length ENCFF000YQL fastq reads ENCSR000EHN ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCB1-human ENCAB000AHW DNA see document see document False 2011-10-29 ENCODE 2 1 28 single-ended 544864453 Michael Snyder, Stanford 0f41e9f05107a3bc8c02e5ad9c682863 https://www.encodeproject.org/files/ENCFF000YQL/@@download/ENCFF000YQL.fastq.gz Illumina Genome Analyzer /files/ENCFF000YQC/ released borderline replicate concordance, low read depth, inconsistent target of control experiment biological replicates with identical biosample insufficient read length ENCFF001VNJ bed narrowPeak peaks ENCSR000EHN ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCB1-human ENCAB000AHW DNA see document see document False 2011-10-29 ENCODE 11198 Michael Snyder, Stanford 566bc3cbb717536c65406705379f91c9 https://www.encodeproject.org/files/ENCFF001VNJ/@@download/ENCFF001VNJ.bed.gz hg19 archived borderline replicate concordance, low read depth, inconsistent target of control experiment biological replicates with identical biosample, missing derived_from insufficient read length ENCFF002CWU bed narrowPeak optimal idr thresholded peaks ENCSR000EHN ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCB1-human ENCAB000AHW DNA see document see document False 2011-10-29 ENCODE 38158 ENCODE Consortium Analysis Working Group e6499640822783d31c0238b31687b4fa https://www.encodeproject.org/files/ENCFF002CWU/@@download/ENCFF002CWU.bed.gz hg19 archived borderline replicate concordance, low read depth, inconsistent target of control experiment biological replicates with identical biosample, missing derived_from insufficient read length ENCFF620CZB bigBed narrowPeak optimal idr thresholded peaks ENCSR000EHN ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCB1-human ENCAB000AHW DNA see document see document False 2011-10-29 ENCODE ENCFF002CWU 129738 ENCODE Consortium f7b370fd98bb8938b19416fa44782ff9 https://www.encodeproject.org/files/ENCFF620CZB/@@download/ENCFF620CZB.bigBed hg19 archived borderline replicate concordance, low read depth, inconsistent target of control experiment biological replicates with identical biosample insufficient read length ENCFF498WIP bam unfiltered alignments ENCSR000EHN ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCB1-human ENCAB000AHW DNA see document see document False 2011-10-29 ENCODE 1 28 ENCFF000YQK, ENCFF643CGH 686419637 ENCODE Processing Pipeline 701ab74485aafe6192f13f1c3628f6d9 https://www.encodeproject.org/files/ENCFF498WIP/@@download/ENCFF498WIP.bam GRCh38 released borderline replicate concordance, low read depth, inconsistent target of control experiment biological replicates with identical biosample insufficient read length ENCFF202MXB bam unfiltered alignments ENCSR000EHN ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCB1-human ENCAB000AHW DNA see document see document False 2011-10-29 ENCODE 2 28 ENCFF000YQL, ENCFF643CGH 705555583 ENCODE Processing Pipeline 925a201e2724740ad847a71aba17b2f2 https://www.encodeproject.org/files/ENCFF202MXB/@@download/ENCFF202MXB.bam GRCh38 released borderline replicate concordance, low read depth, inconsistent target of control experiment biological replicates with identical biosample insufficient read length ENCFF172VKS bam alignments ENCSR000EHN ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCB1-human ENCAB000AHW DNA see document see document False 2011-10-29 ENCODE 2 28 ENCFF000YQL, ENCFF643CGH 463794807 ENCODE Processing Pipeline cd50556102eec8e147561ae550d501e9 https://www.encodeproject.org/files/ENCFF172VKS/@@download/ENCFF172VKS.bam GRCh38 released borderline replicate concordance, low read depth, inconsistent target of control experiment biological replicates with identical biosample insufficient read length ENCFF009UJV bam alignments ENCSR000EHN ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCB1-human ENCAB000AHW DNA see document see document False 2011-10-29 ENCODE 1 28 ENCFF000YQK, ENCFF643CGH 433316885 ENCODE Processing Pipeline 402fe62448dc84de66216044274bbc84 https://www.encodeproject.org/files/ENCFF009UJV/@@download/ENCFF009UJV.bam GRCh38 released borderline replicate concordance, low read depth, inconsistent target of control experiment biological replicates with identical biosample insufficient read length ENCFF982PDN bam unfiltered alignments ENCSR000EHN ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCB1-human ENCAB000AHW DNA see document see document False 2011-10-29 ENCODE 2 28 ENCFF000YQL, ENCFF807MUK 703749565 ENCODE Processing Pipeline cd5c4e33a04f1c3cb0e72bd9aa7d1da5 https://www.encodeproject.org/files/ENCFF982PDN/@@download/ENCFF982PDN.bam hg19 released borderline replicate concordance, low read depth, inconsistent target of control experiment biological replicates with identical biosample insufficient read length ENCFF885GBQ bam unfiltered alignments ENCSR000EHN ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCB1-human ENCAB000AHW DNA see document see document False 2011-10-29 ENCODE 1 28 ENCFF000YQK, ENCFF807MUK 684674978 ENCODE Processing Pipeline bae2adbe04d5a3582666ff99abb60613 https://www.encodeproject.org/files/ENCFF885GBQ/@@download/ENCFF885GBQ.bam hg19 released borderline replicate concordance, low read depth, inconsistent target of control experiment biological replicates with identical biosample insufficient read length ENCFF541YJQ bam alignments ENCSR000EHN ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCB1-human ENCAB000AHW DNA see document see document False 2011-10-29 ENCODE 1 28 ENCFF000YQK, ENCFF807MUK 433740354 ENCODE Processing Pipeline 440ee47a4f521ddf14298b9bf6766603 https://www.encodeproject.org/files/ENCFF541YJQ/@@download/ENCFF541YJQ.bam hg19 released borderline replicate concordance, low read depth, inconsistent target of control experiment biological replicates with identical biosample insufficient read length ENCFF752FZP bam alignments ENCSR000EHN ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCB1-human ENCAB000AHW DNA see document see document False 2011-10-29 ENCODE 2 28 ENCFF000YQL, ENCFF807MUK 464229968 ENCODE Processing Pipeline 82f88e8d5e70b50ecb5a0410ddae3360 https://www.encodeproject.org/files/ENCFF752FZP/@@download/ENCFF752FZP.bam hg19 released borderline replicate concordance, low read depth, inconsistent target of control experiment biological replicates with identical biosample insufficient read length ENCFF490SOP bigWig fold change over control ENCSR000EHN ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCB1-human ENCAB000AHW DNA see document see document False 2011-10-29 ENCODE 2 ENCFF156NSV, ENCFF172VKS 223005117 ENCODE Processing Pipeline f5f09f28483f364e59e6918023c83fb9 https://www.encodeproject.org/files/ENCFF490SOP/@@download/ENCFF490SOP.bigWig GRCh38 released borderline replicate concordance, low read depth, inconsistent target of control experiment biological replicates with identical biosample insufficient read length ENCFF984UHX bigWig signal p-value ENCSR000EHN ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCB1-human ENCAB000AHW DNA see document see document False 2011-10-29 ENCODE 1 ENCFF009UJV, ENCFF156NSV, ENCFF715JBE 428773380 ENCODE Processing Pipeline d3692120d90549024afb0d6af1ca368c https://www.encodeproject.org/files/ENCFF984UHX/@@download/ENCFF984UHX.bigWig GRCh38 released borderline replicate concordance, low read depth, inconsistent target of control experiment biological replicates with identical biosample insufficient read length ENCFF050DLK bigWig fold change over control ENCSR000EHN ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCB1-human ENCAB000AHW DNA see document see document False 2011-10-29 ENCODE 1 ENCFF009UJV, ENCFF156NSV, ENCFF715JBE 268542956 ENCODE Processing Pipeline 7a2bd466b63310fb80259a82bbf2ac6f https://www.encodeproject.org/files/ENCFF050DLK/@@download/ENCFF050DLK.bigWig GRCh38 released borderline replicate concordance, low read depth, inconsistent target of control experiment biological replicates with identical biosample insufficient read length ENCFF614UQS bigWig signal p-value ENCSR000EHN ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCB1-human ENCAB000AHW DNA see document see document False 2011-10-29 ENCODE 2 ENCFF156NSV, ENCFF172VKS 264315506 ENCODE Processing Pipeline da1e1add98cd2f8d6176467f8d8919ad https://www.encodeproject.org/files/ENCFF614UQS/@@download/ENCFF614UQS.bigWig GRCh38 released borderline replicate concordance, low read depth, inconsistent target of control experiment biological replicates with identical biosample insufficient read length ENCFF398GPT bigWig signal p-value ENCSR000EHN ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCB1-human ENCAB000AHW DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF009UJV, ENCFF156NSV, ENCFF172VKS, ENCFF715JBE 521233349 ENCODE Processing Pipeline 95ea2e354dfc52253419ac34005bafd0 https://www.encodeproject.org/files/ENCFF398GPT/@@download/ENCFF398GPT.bigWig GRCh38 released borderline replicate concordance, low read depth, inconsistent target of control experiment biological replicates with identical biosample insufficient read length ENCFF299ZLZ bigBed narrowPeak peaks ENCSR000EHN ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCB1-human ENCAB000AHW DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF290ZKZ 13198435 ENCODE Processing Pipeline 02462ecc9b0592dd3486a6e82142b807 https://www.encodeproject.org/files/ENCFF299ZLZ/@@download/ENCFF299ZLZ.bigBed GRCh38 released borderline replicate concordance, low read depth, inconsistent target of control experiment biological replicates with identical biosample insufficient read length ENCFF276GCO bigWig fold change over control ENCSR000EHN ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCB1-human ENCAB000AHW DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF009UJV, ENCFF156NSV, ENCFF172VKS, ENCFF715JBE 474271862 ENCODE Processing Pipeline 92a0d10da23f530cf3b6bb54f2fb36aa https://www.encodeproject.org/files/ENCFF276GCO/@@download/ENCFF276GCO.bigWig GRCh38 released borderline replicate concordance, low read depth, inconsistent target of control experiment biological replicates with identical biosample insufficient read length ENCFF819SAS bed narrowPeak peaks ENCSR000EHN ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCB1-human ENCAB000AHW DNA see document see document False 2011-10-29 ENCODE 1 ENCFF009UJV, ENCFF156NSV, ENCFF715JBE 5621410 ENCODE Processing Pipeline dff61b40e4222fbfe8a49a4d3aff3dd8 https://www.encodeproject.org/files/ENCFF819SAS/@@download/ENCFF819SAS.bed.gz GRCh38 released borderline replicate concordance, low read depth, inconsistent target of control experiment biological replicates with identical biosample insufficient read length ENCFF765RFM bigBed narrowPeak peaks ENCSR000EHN ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCB1-human ENCAB000AHW DNA see document see document False 2011-10-29 ENCODE 1 ENCFF819SAS 12895414 ENCODE Processing Pipeline a7c8968bd51b375f35754f3009ab6cdf https://www.encodeproject.org/files/ENCFF765RFM/@@download/ENCFF765RFM.bigBed GRCh38 released borderline replicate concordance, low read depth, inconsistent target of control experiment biological replicates with identical biosample insufficient read length ENCFF993YKH bed narrowPeak conservative idr thresholded peaks ENCSR000EHN ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCB1-human ENCAB000AHW DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF290ZKZ, ENCFF419RSJ, ENCFF503XCY, ENCFF819SAS 40150 ENCODE Processing Pipeline 1d7a21782836001fb52dfcadb8a7c24b https://www.encodeproject.org/files/ENCFF993YKH/@@download/ENCFF993YKH.bed.gz GRCh38 released borderline replicate concordance, low read depth, inconsistent target of control experiment biological replicates with identical biosample insufficient read length ENCFF308QHX bed narrowPeak optimal idr thresholded peaks ENCSR000EHN ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCB1-human ENCAB000AHW DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF290ZKZ, ENCFF419RSJ, ENCFF503XCY, ENCFF819SAS 56228 ENCODE Processing Pipeline a8ddaff626781bb6d717dc4eb33d7668 https://www.encodeproject.org/files/ENCFF308QHX/@@download/ENCFF308QHX.bed.gz GRCh38 released borderline replicate concordance, low read depth, inconsistent target of control experiment biological replicates with identical biosample insufficient read length ENCFF503XCY bed narrowPeak peaks ENCSR000EHN ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCB1-human ENCAB000AHW DNA see document see document False 2011-10-29 ENCODE 2 ENCFF156NSV, ENCFF172VKS 4633615 ENCODE Processing Pipeline f5d1dc0e003eb55ec5d8e93e2377fe2b https://www.encodeproject.org/files/ENCFF503XCY/@@download/ENCFF503XCY.bed.gz GRCh38 released borderline replicate concordance, low read depth, inconsistent target of control experiment biological replicates with identical biosample insufficient read length ENCFF290ZKZ bed narrowPeak peaks ENCSR000EHN ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCB1-human ENCAB000AHW DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF009UJV, ENCFF156NSV, ENCFF172VKS, ENCFF715JBE 6155554 ENCODE Processing Pipeline 0cb7dca2e48261da83ee5fa833757d7f https://www.encodeproject.org/files/ENCFF290ZKZ/@@download/ENCFF290ZKZ.bed.gz GRCh38 released borderline replicate concordance, low read depth, inconsistent target of control experiment biological replicates with identical biosample insufficient read length ENCFF371PMS bigBed narrowPeak peaks ENCSR000EHN ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCB1-human ENCAB000AHW DNA see document see document False 2011-10-29 ENCODE 2 ENCFF503XCY 10414110 ENCODE Processing Pipeline 254a0424ce6caca870d6609b3bf55f03 https://www.encodeproject.org/files/ENCFF371PMS/@@download/ENCFF371PMS.bigBed GRCh38 released borderline replicate concordance, low read depth, inconsistent target of control experiment biological replicates with identical biosample insufficient read length ENCFF225DKT bigBed narrowPeak conservative idr thresholded peaks ENCSR000EHN ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCB1-human ENCAB000AHW DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF993YKH 133522 ENCODE Processing Pipeline f32bfceca4a2045710480cb60370f049 https://www.encodeproject.org/files/ENCFF225DKT/@@download/ENCFF225DKT.bigBed GRCh38 released borderline replicate concordance, low read depth, inconsistent target of control experiment biological replicates with identical biosample insufficient read length ENCFF679NGW bigBed narrowPeak optimal idr thresholded peaks ENCSR000EHN ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCB1-human ENCAB000AHW DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF308QHX 159392 ENCODE Processing Pipeline a5ecca5ce213514baf54ce4419704f3d https://www.encodeproject.org/files/ENCFF679NGW/@@download/ENCFF679NGW.bigBed GRCh38 released borderline replicate concordance, low read depth, inconsistent target of control experiment biological replicates with identical biosample insufficient read length ENCFF864YVP bigWig signal p-value ENCSR000EHN ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCB1-human ENCAB000AHW DNA see document see document False 2011-10-29 ENCODE 1 ENCFF498SAC, ENCFF541YJQ, ENCFF732TLR 427557073 ENCODE Processing Pipeline 2cbe88ea3cffe82b0e2311656dba199e https://www.encodeproject.org/files/ENCFF864YVP/@@download/ENCFF864YVP.bigWig hg19 released borderline replicate concordance, low read depth, inconsistent target of control experiment biological replicates with identical biosample insufficient read length ENCFF209NFH bigWig fold change over control ENCSR000EHN ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCB1-human ENCAB000AHW DNA see document see document False 2011-10-29 ENCODE 1 ENCFF498SAC, ENCFF541YJQ, ENCFF732TLR 273969793 ENCODE Processing Pipeline b6104703a9264e967ef87c10a4fd2fbd https://www.encodeproject.org/files/ENCFF209NFH/@@download/ENCFF209NFH.bigWig hg19 released borderline replicate concordance, low read depth, inconsistent target of control experiment biological replicates with identical biosample insufficient read length ENCFF790RYU bed narrowPeak peaks ENCSR000EHN ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCB1-human ENCAB000AHW DNA see document see document False 2011-10-29 ENCODE 1 ENCFF498SAC, ENCFF541YJQ, ENCFF732TLR 5598548 ENCODE Processing Pipeline b32947328791f45a48f53c1fdbec9f7e https://www.encodeproject.org/files/ENCFF790RYU/@@download/ENCFF790RYU.bed.gz hg19 released borderline replicate concordance, low read depth, inconsistent target of control experiment biological replicates with identical biosample insufficient read length ENCFF785WEJ bigWig fold change over control ENCSR000EHN ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCB1-human ENCAB000AHW DNA see document see document False 2011-10-29 ENCODE 2 ENCFF498SAC, ENCFF752FZP 223493477 ENCODE Processing Pipeline 6583986ecd68f1c28079b740f113a7b3 https://www.encodeproject.org/files/ENCFF785WEJ/@@download/ENCFF785WEJ.bigWig hg19 released borderline replicate concordance, low read depth, inconsistent target of control experiment biological replicates with identical biosample insufficient read length ENCFF874PSR bigWig signal p-value ENCSR000EHN ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCB1-human ENCAB000AHW DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF498SAC, ENCFF541YJQ, ENCFF732TLR, ENCFF752FZP 524872065 ENCODE Processing Pipeline b1d71d8f44cc23294c9067a63771c028 https://www.encodeproject.org/files/ENCFF874PSR/@@download/ENCFF874PSR.bigWig hg19 released borderline replicate concordance, low read depth, inconsistent target of control experiment biological replicates with identical biosample insufficient read length ENCFF318HRX bed narrowPeak peaks ENCSR000EHN ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCB1-human ENCAB000AHW DNA see document see document False 2011-10-29 ENCODE 2 ENCFF498SAC, ENCFF752FZP 4637578 ENCODE Processing Pipeline ccc246bc6aff2f88324d1564a514cd48 https://www.encodeproject.org/files/ENCFF318HRX/@@download/ENCFF318HRX.bed.gz hg19 released borderline replicate concordance, low read depth, inconsistent target of control experiment biological replicates with identical biosample insufficient read length ENCFF084VID bigWig signal p-value ENCSR000EHN ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCB1-human ENCAB000AHW DNA see document see document False 2011-10-29 ENCODE 2 ENCFF498SAC, ENCFF752FZP 264543243 ENCODE Processing Pipeline 461aa39d6fa34cb40b08d3550d0d9c40 https://www.encodeproject.org/files/ENCFF084VID/@@download/ENCFF084VID.bigWig hg19 released borderline replicate concordance, low read depth, inconsistent target of control experiment biological replicates with identical biosample insufficient read length ENCFF800FII bigWig fold change over control ENCSR000EHN ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCB1-human ENCAB000AHW DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF498SAC, ENCFF541YJQ, ENCFF732TLR, ENCFF752FZP 481105297 ENCODE Processing Pipeline 9d2c98633094bee520809ba26029de7b https://www.encodeproject.org/files/ENCFF800FII/@@download/ENCFF800FII.bigWig hg19 released borderline replicate concordance, low read depth, inconsistent target of control experiment biological replicates with identical biosample insufficient read length ENCFF573QSE bed narrowPeak peaks ENCSR000EHN ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCB1-human ENCAB000AHW DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF498SAC, ENCFF541YJQ, ENCFF732TLR, ENCFF752FZP 6194534 ENCODE Processing Pipeline a138d372bad6dfdb6a60da64b6ffd555 https://www.encodeproject.org/files/ENCFF573QSE/@@download/ENCFF573QSE.bed.gz hg19 released borderline replicate concordance, low read depth, inconsistent target of control experiment biological replicates with identical biosample insufficient read length ENCFF075CME bigBed narrowPeak peaks ENCSR000EHN ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCB1-human ENCAB000AHW DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF573QSE 13196575 ENCODE Processing Pipeline afee96c45ed64517d3e0dc7bf52cd149 https://www.encodeproject.org/files/ENCFF075CME/@@download/ENCFF075CME.bigBed hg19 released borderline replicate concordance, low read depth, inconsistent target of control experiment biological replicates with identical biosample insufficient read length ENCFF252ARH bigBed narrowPeak conservative idr thresholded peaks ENCSR000EHN ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCB1-human ENCAB000AHW DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF056FNQ 134263 ENCODE Processing Pipeline af173a71c8b05e10be9fb138e9dba1d0 https://www.encodeproject.org/files/ENCFF252ARH/@@download/ENCFF252ARH.bigBed hg19 released borderline replicate concordance, low read depth, inconsistent target of control experiment biological replicates with identical biosample insufficient read length ENCFF466LVN bigBed narrowPeak peaks ENCSR000EHN ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCB1-human ENCAB000AHW DNA see document see document False 2011-10-29 ENCODE 2 ENCFF318HRX 10415039 ENCODE Processing Pipeline 108faba4c3d4b27c061fef71b3b059bd https://www.encodeproject.org/files/ENCFF466LVN/@@download/ENCFF466LVN.bigBed hg19 released borderline replicate concordance, low read depth, inconsistent target of control experiment biological replicates with identical biosample insufficient read length ENCFF056FNQ bed narrowPeak conservative idr thresholded peaks ENCSR000EHN ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCB1-human ENCAB000AHW DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF001TDO, ENCFF318HRX, ENCFF573QSE, ENCFF790RYU 40579 ENCODE Processing Pipeline e8111c73c049aca893b9790e1f339f8e https://www.encodeproject.org/files/ENCFF056FNQ/@@download/ENCFF056FNQ.bed.gz hg19 released borderline replicate concordance, low read depth, inconsistent target of control experiment biological replicates with identical biosample insufficient read length ENCFF349UJR bigBed narrowPeak peaks ENCSR000EHN ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCB1-human ENCAB000AHW DNA see document see document False 2011-10-29 ENCODE 1 ENCFF790RYU 12936255 ENCODE Processing Pipeline 4ed599a2db811318030ace05541ed01d https://www.encodeproject.org/files/ENCFF349UJR/@@download/ENCFF349UJR.bigBed hg19 released borderline replicate concordance, low read depth, inconsistent target of control experiment biological replicates with identical biosample insufficient read length ENCFF299OMG bigBed narrowPeak optimal idr thresholded peaks ENCSR000EHN ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCB1-human ENCAB000AHW DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF944GJH 162883 ENCODE Processing Pipeline 616d26330e16aa1b186ae2e0e294360c https://www.encodeproject.org/files/ENCFF299OMG/@@download/ENCFF299OMG.bigBed hg19 released borderline replicate concordance, low read depth, inconsistent target of control experiment biological replicates with identical biosample insufficient read length ENCFF944GJH bed narrowPeak optimal idr thresholded peaks ENCSR000EHN ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCB1-human ENCAB000AHW DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF001TDO, ENCFF318HRX, ENCFF573QSE, ENCFF790RYU 58560 ENCODE Processing Pipeline b3ff6578520e0ba6f5791c57d2409267 https://www.encodeproject.org/files/ENCFF944GJH/@@download/ENCFF944GJH.bed.gz hg19 released borderline replicate concordance, low read depth, inconsistent target of control experiment biological replicates with identical biosample insufficient read length ENCFF000QDB bam alignments ENCSR000BKR ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1 ENCFF000QDG 406591215 Richard Myers, HAIB fd68648bfc10e5e7976b8e9320f14f99 https://www.encodeproject.org/files/ENCFF000QDB/@@download/ENCFF000QDB.bam hg19 archived low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, insufficient read depth ENCFF000QDC bigBed broadPeak peaks ENCSR000BKR ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1 1 ENCFF001UKR 765350 Richard Myers, HAIB c6ebe6c7f3d67a883aeefda5fa5592c9 https://www.encodeproject.org/files/ENCFF000QDC/@@download/ENCFF000QDC.bigBed hg19 archived low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, insufficient read depth ENCFF000QDD bigBed broadPeak peaks ENCSR000BKR ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 2 1 ENCFF001UKS 1571305 Richard Myers, HAIB cbe387b47a279595cc6dd90a2b203ab8 https://www.encodeproject.org/files/ENCFF000QDD/@@download/ENCFF000QDD.bigBed hg19 archived low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, insufficient read depth ENCFF000QDE bam alignments ENCSR000BKR ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 2 ENCFF000QDO 926428519 Richard Myers, HAIB bf42dd13eba357c4a8ff7b6171f6b2c5 https://www.encodeproject.org/files/ENCFF000QDE/@@download/ENCFF000QDE.bam hg19 archived low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, insufficient read depth ENCFF000QDF bigWig raw signal ENCSR000BKR ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1 1 14938909 Richard Myers, HAIB c0b26908dffb93eedc42bd8086443f29 https://www.encodeproject.org/files/ENCFF000QDF/@@download/ENCFF000QDF.bigWig hg19 archived low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample, missing derived_from control insufficient read depth, insufficient read depth ENCFF000QDG fastq reads ENCSR000BKR ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1 1 36 single-ended 365214444 Richard Myers, HAIB aaf7bfdbfa35a23d8c48faccdc515c47 https://www.encodeproject.org/files/ENCFF000QDG/@@download/ENCFF000QDG.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000QEX/ released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, insufficient read depth ENCFF000QDI bigWig raw signal ENCSR000BKR ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 2 1 56783068 Richard Myers, HAIB d0b176322b5ce42abebaebd746ee4c19 https://www.encodeproject.org/files/ENCFF000QDI/@@download/ENCFF000QDI.bigWig hg19 archived low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample, missing derived_from control insufficient read depth, insufficient read depth ENCFF000QDO fastq reads ENCSR000BKR ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 2 1 36 single-ended 955304762 Richard Myers, HAIB 8df2042bfdd206b201df3baafe25c775 https://www.encodeproject.org/files/ENCFF000QDO/@@download/ENCFF000QDO.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000QEX/ released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, insufficient read depth ENCFF001UKR bed broadPeak peaks ENCSR000BKR ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1 1 413957 Richard Myers, HAIB 8b0e92f2c22e3a57cd52c99ea7405de8 https://www.encodeproject.org/files/ENCFF001UKR/@@download/ENCFF001UKR.bed.gz hg19 archived low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample, missing derived_from control insufficient read depth, insufficient read depth ENCFF001UKS bed broadPeak peaks ENCSR000BKR ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 2 1 795112 Richard Myers, HAIB 9ef9969ecd0c72beb4ca583b9935b0fd https://www.encodeproject.org/files/ENCFF001UKS/@@download/ENCFF001UKS.bed.gz hg19 archived low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample, missing derived_from control insufficient read depth, insufficient read depth ENCFF002CMH bed narrowPeak optimal idr thresholded peaks ENCSR000BKR ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 482481 ENCODE Consortium Analysis Working Group 30682bdafd5195e37a07eb7a47a18ebf https://www.encodeproject.org/files/ENCFF002CMH/@@download/ENCFF002CMH.bed.gz hg19 archived low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample, missing derived_from control insufficient read depth, insufficient read depth ENCFF164YQT bigBed narrowPeak optimal idr thresholded peaks ENCSR000BKR ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE ENCFF002CMH 1241214 ENCODE Consortium 048dbe48c0e4ca1b2d09fda1d959848d https://www.encodeproject.org/files/ENCFF164YQT/@@download/ENCFF164YQT.bigBed hg19 archived low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, insufficient read depth ENCFF037VJL bam alignments ENCSR000BKR ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000QDG, ENCFF643CGH 293759242 ENCODE Processing Pipeline f6a219a3686a139e28762c3b277d8345 https://www.encodeproject.org/files/ENCFF037VJL/@@download/ENCFF037VJL.bam GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, insufficient read depth ENCFF044YYE bam unfiltered alignments ENCSR000BKR ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000QDG, ENCFF643CGH 489871620 ENCODE Processing Pipeline c8ae90daeae7c7ed0a10bb183a06b6cf https://www.encodeproject.org/files/ENCFF044YYE/@@download/ENCFF044YYE.bam GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, insufficient read depth ENCFF277YIL bam unfiltered alignments ENCSR000BKR ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000QDO, ENCFF643CGH 1167573131 ENCODE Processing Pipeline b5d0e54fc1387f22ca72d2af95184ea1 https://www.encodeproject.org/files/ENCFF277YIL/@@download/ENCFF277YIL.bam GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, insufficient read depth ENCFF115UJX bam alignments ENCSR000BKR ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000QDO, ENCFF643CGH 607400278 ENCODE Processing Pipeline c3d44d2089ef1139c1a9bd4f977a02d7 https://www.encodeproject.org/files/ENCFF115UJX/@@download/ENCFF115UJX.bam GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, insufficient read depth ENCFF029OAZ bam unfiltered alignments ENCSR000BKR ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000QDG, ENCFF807MUK 489526992 ENCODE Processing Pipeline a4761a7de106a85cb6809d4a38ca90de https://www.encodeproject.org/files/ENCFF029OAZ/@@download/ENCFF029OAZ.bam hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, insufficient read depth ENCFF788MNU bam alignments ENCSR000BKR ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000QDG, ENCFF807MUK 293979846 ENCODE Processing Pipeline cc8f5b992246f4e23fa74411c7ca3a91 https://www.encodeproject.org/files/ENCFF788MNU/@@download/ENCFF788MNU.bam hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, insufficient read depth ENCFF669ELS bam unfiltered alignments ENCSR000BKR ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000QDO, ENCFF807MUK 1167290114 ENCODE Processing Pipeline 06bc905c926bf139857835d4e3ace360 https://www.encodeproject.org/files/ENCFF669ELS/@@download/ENCFF669ELS.bam hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, insufficient read depth ENCFF196OAS bam alignments ENCSR000BKR ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000QDO, ENCFF807MUK 607852691 ENCODE Processing Pipeline a58e9b6256175d512f082988b093d258 https://www.encodeproject.org/files/ENCFF196OAS/@@download/ENCFF196OAS.bam hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, insufficient read depth ENCFF496ODB bigWig signal p-value ENCSR000BKR ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 2 ENCFF196OAS, ENCFF750MIM 214694035 ENCODE Processing Pipeline 7f4de1854144ebcf5dbaca504f17a7cd https://www.encodeproject.org/files/ENCFF496ODB/@@download/ENCFF496ODB.bigWig hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, insufficient read depth ENCFF827GEM bigWig fold change over control ENCSR000BKR ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF196OAS, ENCFF750MIM, ENCFF788MNU 302196059 ENCODE Processing Pipeline f159f4b8d478abd7ff8b6a3a8120774b https://www.encodeproject.org/files/ENCFF827GEM/@@download/ENCFF827GEM.bigWig hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, insufficient read depth ENCFF519QQX bed narrowPeak peaks ENCSR000BKR ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1 ENCFF750MIM, ENCFF788MNU 5120602 ENCODE Processing Pipeline 85d929ad32fc06df986203b6fc53cdcf https://www.encodeproject.org/files/ENCFF519QQX/@@download/ENCFF519QQX.bed.gz hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, insufficient read depth ENCFF065RJC bed narrowPeak peaks ENCSR000BKR ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF196OAS, ENCFF750MIM, ENCFF788MNU 6501159 ENCODE Processing Pipeline 07a3dff1a8001a9b8ba175f7a041e0dc https://www.encodeproject.org/files/ENCFF065RJC/@@download/ENCFF065RJC.bed.gz hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, insufficient read depth ENCFF707AWX bed narrowPeak peaks ENCSR000BKR ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF037VJL, ENCFF115UJX, ENCFF772PJM 6498050 ENCODE Processing Pipeline 6ed3b2d7c302f43f0e7918437b74c60a https://www.encodeproject.org/files/ENCFF707AWX/@@download/ENCFF707AWX.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, insufficient read depth ENCFF561TMA bigBed narrowPeak peaks ENCSR000BKR ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 2 ENCFF510TJQ 11916977 ENCODE Processing Pipeline b614c8320a341cc60d2725238baf6d71 https://www.encodeproject.org/files/ENCFF561TMA/@@download/ENCFF561TMA.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, insufficient read depth ENCFF824ANA bed narrowPeak conservative idr thresholded peaks ENCSR000BKR ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF368BII, ENCFF419RSJ, ENCFF510TJQ, ENCFF707AWX 417093 ENCODE Processing Pipeline 493eff3c7299ad713724ce46b793612a https://www.encodeproject.org/files/ENCFF824ANA/@@download/ENCFF824ANA.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, insufficient read depth ENCFF134HVN bigBed narrowPeak peaks ENCSR000BKR ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF065RJC 12019084 ENCODE Processing Pipeline 96e6bb9de83b802950f57ae45681f11e https://www.encodeproject.org/files/ENCFF134HVN/@@download/ENCFF134HVN.bigBed hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, insufficient read depth ENCFF845FTJ bigBed narrowPeak conservative idr thresholded peaks ENCSR000BKR ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF879HIG 861524 ENCODE Processing Pipeline 3ee0bc465b7c99c1de48935ad0896ebd https://www.encodeproject.org/files/ENCFF845FTJ/@@download/ENCFF845FTJ.bigBed hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, insufficient read depth ENCFF542DOG bed narrowPeak optimal idr thresholded peaks ENCSR000BKR ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF001TDO, ENCFF065RJC, ENCFF306TSB, ENCFF519QQX 498177 ENCODE Processing Pipeline 0598e742722b3d8250df0367c201924d https://www.encodeproject.org/files/ENCFF542DOG/@@download/ENCFF542DOG.bed.gz hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, insufficient read depth ENCFF338AQL bigBed narrowPeak optimal idr thresholded peaks ENCSR000BKR ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF542DOG 969945 ENCODE Processing Pipeline 5993a8c3ed103b82ac8ed07fdc7ae0d4 https://www.encodeproject.org/files/ENCFF338AQL/@@download/ENCFF338AQL.bigBed hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, insufficient read depth ENCFF811SWR bigWig fold change over control ENCSR000BKR ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF037VJL, ENCFF115UJX, ENCFF772PJM 304892865 ENCODE Processing Pipeline 91a28efe5340f1eb0ba84073b94190ab https://www.encodeproject.org/files/ENCFF811SWR/@@download/ENCFF811SWR.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, insufficient read depth ENCFF368BII bed narrowPeak peaks ENCSR000BKR ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1 ENCFF037VJL, ENCFF772PJM 5119095 ENCODE Processing Pipeline dfdbbc6375db04b652c160e5eeeba32c https://www.encodeproject.org/files/ENCFF368BII/@@download/ENCFF368BII.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, insufficient read depth ENCFF732ZXO bigWig signal p-value ENCSR000BKR ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1 ENCFF750MIM, ENCFF788MNU 183249114 ENCODE Processing Pipeline 7c9499f39869e617d4d7a9f270067e45 https://www.encodeproject.org/files/ENCFF732ZXO/@@download/ENCFF732ZXO.bigWig hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, insufficient read depth ENCFF036KTV bigWig fold change over control ENCSR000BKR ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1 ENCFF750MIM, ENCFF788MNU 125381747 ENCODE Processing Pipeline 969cb8453fc37084b71b3ad2f7fd3cc0 https://www.encodeproject.org/files/ENCFF036KTV/@@download/ENCFF036KTV.bigWig hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, insufficient read depth ENCFF210ADZ bigWig signal p-value ENCSR000BKR ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF196OAS, ENCFF750MIM, ENCFF788MNU 209300612 ENCODE Processing Pipeline ef6eeb698e4ebefbc8e5a600aebe688d https://www.encodeproject.org/files/ENCFF210ADZ/@@download/ENCFF210ADZ.bigWig hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, insufficient read depth ENCFF750ONR bigWig fold change over control ENCSR000BKR ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 2 ENCFF196OAS, ENCFF750MIM 215333029 ENCODE Processing Pipeline 557340e23649cee4f0be486d415b9771 https://www.encodeproject.org/files/ENCFF750ONR/@@download/ENCFF750ONR.bigWig hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, insufficient read depth ENCFF306TSB bed narrowPeak peaks ENCSR000BKR ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 2 ENCFF196OAS, ENCFF750MIM 6039123 ENCODE Processing Pipeline c11321251b025b40027c6c8665b8ea7a https://www.encodeproject.org/files/ENCFF306TSB/@@download/ENCFF306TSB.bed.gz hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, insufficient read depth ENCFF281WLZ bigBed narrowPeak peaks ENCSR000BKR ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1 ENCFF519QQX 11875647 ENCODE Processing Pipeline efd14dba352095b1f9aef7ff2dd083f1 https://www.encodeproject.org/files/ENCFF281WLZ/@@download/ENCFF281WLZ.bigBed hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, insufficient read depth ENCFF785FHN bigBed narrowPeak peaks ENCSR000BKR ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 2 ENCFF306TSB 11912509 ENCODE Processing Pipeline c3b1d5f172be4f32ae13bffb75272380 https://www.encodeproject.org/files/ENCFF785FHN/@@download/ENCFF785FHN.bigBed hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, insufficient read depth ENCFF879HIG bed narrowPeak conservative idr thresholded peaks ENCSR000BKR ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF001TDO, ENCFF065RJC, ENCFF306TSB, ENCFF519QQX 417747 ENCODE Processing Pipeline 182719848aa8f72e325f493bcb864739 https://www.encodeproject.org/files/ENCFF879HIG/@@download/ENCFF879HIG.bed.gz hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, insufficient read depth ENCFF993MRG bigWig signal p-value ENCSR000BKR ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 2 ENCFF115UJX, ENCFF772PJM 214634304 ENCODE Processing Pipeline a2bb86cfb810cb890fe355f95dda0937 https://www.encodeproject.org/files/ENCFF993MRG/@@download/ENCFF993MRG.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, insufficient read depth ENCFF866NHX bigWig signal p-value ENCSR000BKR ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF037VJL, ENCFF115UJX, ENCFF772PJM 209395872 ENCODE Processing Pipeline 34aac58b0e3ae1012447ae49586b6dd6 https://www.encodeproject.org/files/ENCFF866NHX/@@download/ENCFF866NHX.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, insufficient read depth ENCFF613IKP bigWig fold change over control ENCSR000BKR ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 2 ENCFF115UJX, ENCFF772PJM 218387001 ENCODE Processing Pipeline 3a5fe372180f4a3605030653fd405afb https://www.encodeproject.org/files/ENCFF613IKP/@@download/ENCFF613IKP.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, insufficient read depth ENCFF220XDU bigBed narrowPeak peaks ENCSR000BKR ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1 ENCFF368BII 11883435 ENCODE Processing Pipeline 907b6ce11132dc69fb5345efb88c0926 https://www.encodeproject.org/files/ENCFF220XDU/@@download/ENCFF220XDU.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, insufficient read depth ENCFF122XDI bigBed narrowPeak peaks ENCSR000BKR ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF707AWX 12023578 ENCODE Processing Pipeline d82df5f9cb808dfbc34bb8a0ef0d567c https://www.encodeproject.org/files/ENCFF122XDI/@@download/ENCFF122XDI.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, insufficient read depth ENCFF881JQV bigBed narrowPeak conservative idr thresholded peaks ENCSR000BKR ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF824ANA 862141 ENCODE Processing Pipeline 34d376c049496ed33de6d9a4345dce63 https://www.encodeproject.org/files/ENCFF881JQV/@@download/ENCFF881JQV.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, insufficient read depth ENCFF839TWP bigWig signal p-value ENCSR000BKR ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1 ENCFF037VJL, ENCFF772PJM 215453521 ENCODE Processing Pipeline a9312c31985243ad27fefa18127324e7 https://www.encodeproject.org/files/ENCFF839TWP/@@download/ENCFF839TWP.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, insufficient read depth ENCFF510TJQ bed narrowPeak peaks ENCSR000BKR ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 2 ENCFF115UJX, ENCFF772PJM 6038249 ENCODE Processing Pipeline 4ddf4e319a19a86a6139dd0a79ba50d3 https://www.encodeproject.org/files/ENCFF510TJQ/@@download/ENCFF510TJQ.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, insufficient read depth ENCFF404FQO bigBed narrowPeak optimal idr thresholded peaks ENCSR000BKR ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF053XYZ 967810 ENCODE Processing Pipeline 90cb53e2887d69e7ce16c243dfcc80e6 https://www.encodeproject.org/files/ENCFF404FQO/@@download/ENCFF404FQO.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, insufficient read depth ENCFF367EEF bigWig fold change over control ENCSR000BKR ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1 ENCFF037VJL, ENCFF772PJM 125118119 ENCODE Processing Pipeline 0e640be6367b904cb1ed52153d0fc50b https://www.encodeproject.org/files/ENCFF367EEF/@@download/ENCFF367EEF.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, insufficient read depth ENCFF053XYZ bed narrowPeak optimal idr thresholded peaks ENCSR000BKR ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2AphosphoS5-human ENCAB000AOD DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF368BII, ENCFF419RSJ, ENCFF510TJQ, ENCFF707AWX 496748 ENCODE Processing Pipeline ca96abffe1596788d7d0f471d41f959c https://www.encodeproject.org/files/ENCFF053XYZ/@@download/ENCFF053XYZ.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, insufficient read depth ENCFF631KTX bam unfiltered alignments ENCSR931HNY ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA1-human ENCAB708RYV DNA False 2016-06-14 ENCODE 2 100 ENCFF165NJF, ENCFF226TLO, ENCFF807MUK 4342039108 ENCODE Processing Pipeline d2a1b579685d3e5912ceff082cbe774e https://www.encodeproject.org/files/ENCFF631KTX/@@download/ENCFF631KTX.bam hg19 released low read depth ENCFF667OBY bam unfiltered alignments ENCSR931HNY ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA1-human ENCAB708RYV DNA False 2016-06-14 ENCODE 1 100 ENCFF033TZD, ENCFF137DWP, ENCFF807MUK 3489608894 ENCODE Processing Pipeline e4a52bf281481a46bdba4eb8e7be5435 https://www.encodeproject.org/files/ENCFF667OBY/@@download/ENCFF667OBY.bam hg19 released low read depth ENCFF226TLO fastq reads ENCSR931HNY ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA1-human ENCAB708RYV DNA False 2016-06-14 ENCODE 2 1 100 paired-ended 2 ENCFF165NJF 2031072253 Michael Snyder, Stanford 1dfbb504830e25ea1a48edd1c94b49e3 SRA:SRR5112295 https://www.encodeproject.org/files/ENCFF226TLO/@@download/ENCFF226TLO.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFA/ released low read depth ENCFF033TZD fastq reads ENCSR931HNY ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA1-human ENCAB708RYV DNA False 2016-06-14 ENCODE 1 1 100 paired-ended 2 ENCFF137DWP 1632516739 Michael Snyder, Stanford 6b91c7772d5e563dc3a4159e16d83f7b SRA:SRR5112294 https://www.encodeproject.org/files/ENCFF033TZD/@@download/ENCFF033TZD.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFH/ released low read depth ENCFF165NJF fastq reads ENCSR931HNY ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA1-human ENCAB708RYV DNA False 2016-06-14 ENCODE 2 1 100 paired-ended 1 ENCFF226TLO 1920578294 Michael Snyder, Stanford 5729717c803104c446d9b859b3f79b7a SRA:SRR5112295 https://www.encodeproject.org/files/ENCFF165NJF/@@download/ENCFF165NJF.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFD/ released low read depth ENCFF137DWP fastq reads ENCSR931HNY ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA1-human ENCAB708RYV DNA False 2016-06-14 ENCODE 1 1 100 paired-ended 1 ENCFF033TZD 1540252021 Michael Snyder, Stanford 07dea25cf91a35c313aca482d7e1f294 SRA:SRR5112294 https://www.encodeproject.org/files/ENCFF137DWP/@@download/ENCFF137DWP.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFF/ released low read depth ENCFF690URW bam alignments ENCSR931HNY ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA1-human ENCAB708RYV DNA False 2016-06-14 ENCODE 2 100 ENCFF165NJF, ENCFF226TLO, ENCFF807MUK 3508571922 ENCODE Processing Pipeline 9f9fbf81b0778a45d498f71db3b5ee60 https://www.encodeproject.org/files/ENCFF690URW/@@download/ENCFF690URW.bam hg19 released low read depth ENCFF208HMF bam alignments ENCSR931HNY ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA1-human ENCAB708RYV DNA False 2016-06-14 ENCODE 1 100 ENCFF033TZD, ENCFF137DWP, ENCFF807MUK 2580706789 ENCODE Processing Pipeline 51e9c1adc7202e6097699440744bd042 https://www.encodeproject.org/files/ENCFF208HMF/@@download/ENCFF208HMF.bam hg19 released low read depth ENCFF409BLL bigWig signal p-value ENCSR931HNY ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA1-human ENCAB708RYV DNA False 2016-06-14 ENCODE 1 ENCFF208HMF, ENCFF581ZJL 981600253 ENCODE Processing Pipeline ff1f26b9c2a16ab2064ab70c030747a6 https://www.encodeproject.org/files/ENCFF409BLL/@@download/ENCFF409BLL.bigWig hg19 released low read depth ENCFF018FJF bigWig signal p-value ENCSR931HNY ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA1-human ENCAB708RYV DNA False 2016-06-14 ENCODE 2 ENCFF051LWI, ENCFF690URW 911705528 ENCODE Processing Pipeline fb74edb703f9b726ead77f969b626c44 https://www.encodeproject.org/files/ENCFF018FJF/@@download/ENCFF018FJF.bigWig hg19 released low read depth ENCFF163ACV bigWig signal p-value ENCSR931HNY ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA1-human ENCAB708RYV DNA False 2016-06-14 ENCODE 1, 2 ENCFF051LWI, ENCFF208HMF, ENCFF581ZJL, ENCFF690URW 1613135529 ENCODE Processing Pipeline 32d3d8575ddd2d142f0f2817d560578c https://www.encodeproject.org/files/ENCFF163ACV/@@download/ENCFF163ACV.bigWig hg19 released low read depth ENCFF896RWL bigWig fold change over control ENCSR931HNY ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA1-human ENCAB708RYV DNA False 2016-06-14 ENCODE 1 ENCFF208HMF, ENCFF581ZJL 855348682 ENCODE Processing Pipeline 648ab46f4e796f3e4817bd1356c3a598 https://www.encodeproject.org/files/ENCFF896RWL/@@download/ENCFF896RWL.bigWig hg19 released low read depth ENCFF706GOU bigWig fold change over control ENCSR931HNY ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA1-human ENCAB708RYV DNA False 2016-06-14 ENCODE 2 ENCFF051LWI, ENCFF690URW 1018513422 ENCODE Processing Pipeline 930929a460bc3e26fb5853ed7df919d4 https://www.encodeproject.org/files/ENCFF706GOU/@@download/ENCFF706GOU.bigWig hg19 released low read depth ENCFF786SHU bed narrowPeak peaks ENCSR931HNY ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA1-human ENCAB708RYV DNA False 2016-06-14 ENCODE 2 ENCFF051LWI, ENCFF690URW 6674084 ENCODE Processing Pipeline 5ffc9373da303fbbce7ff3bcee792941 https://www.encodeproject.org/files/ENCFF786SHU/@@download/ENCFF786SHU.bed.gz hg19 released low read depth ENCFF941LGJ bigWig fold change over control ENCSR931HNY ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA1-human ENCAB708RYV DNA False 2016-06-14 ENCODE 1, 2 ENCFF051LWI, ENCFF208HMF, ENCFF581ZJL, ENCFF690URW 1839243030 ENCODE Processing Pipeline 523e5a4a05db8d27180eed1a24c070bc https://www.encodeproject.org/files/ENCFF941LGJ/@@download/ENCFF941LGJ.bigWig hg19 released low read depth ENCFF428HHR bed narrowPeak peaks ENCSR931HNY ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA1-human ENCAB708RYV DNA False 2016-06-14 ENCODE 1 ENCFF208HMF, ENCFF581ZJL 6312651 ENCODE Processing Pipeline 7b8c9af1b060b40e547da91d419384f4 https://www.encodeproject.org/files/ENCFF428HHR/@@download/ENCFF428HHR.bed.gz hg19 released low read depth ENCFF682SOZ bigBed narrowPeak peaks ENCSR931HNY ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA1-human ENCAB708RYV DNA False 2016-06-14 ENCODE 1 ENCFF428HHR 13358137 ENCODE Processing Pipeline c10d0c38af2808658258618769c99032 https://www.encodeproject.org/files/ENCFF682SOZ/@@download/ENCFF682SOZ.bigBed hg19 released low read depth ENCFF633IWB bed narrowPeak peaks ENCSR931HNY ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA1-human ENCAB708RYV DNA False 2016-06-14 ENCODE 1, 2 ENCFF051LWI, ENCFF208HMF, ENCFF581ZJL, ENCFF690URW 7176680 ENCODE Processing Pipeline b908015cbd5ccd5a2dda5c8ea4cd6dc2 https://www.encodeproject.org/files/ENCFF633IWB/@@download/ENCFF633IWB.bed.gz hg19 released low read depth ENCFF529QGD bigBed narrowPeak peaks ENCSR931HNY ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA1-human ENCAB708RYV DNA False 2016-06-14 ENCODE 2 ENCFF786SHU 13270670 ENCODE Processing Pipeline 023e3d4301989da5925986ed30d3ed5f https://www.encodeproject.org/files/ENCFF529QGD/@@download/ENCFF529QGD.bigBed hg19 released low read depth ENCFF154WLA bigBed narrowPeak peaks ENCSR931HNY ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA1-human ENCAB708RYV DNA False 2016-06-14 ENCODE 1, 2 ENCFF633IWB 13174617 ENCODE Processing Pipeline 39d50700e0ef1df1273ec959c2d2e536 https://www.encodeproject.org/files/ENCFF154WLA/@@download/ENCFF154WLA.bigBed hg19 released low read depth ENCFF941FBC bam unfiltered alignments ENCSR931HNY ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA1-human ENCAB708RYV DNA False 2016-06-14 ENCODE 1 100 ENCFF033TZD, ENCFF137DWP, ENCFF643CGH 3490966366 ENCODE Processing Pipeline 1b822cac77b847791f9e7cebbd709658 https://www.encodeproject.org/files/ENCFF941FBC/@@download/ENCFF941FBC.bam GRCh38 released low read depth ENCFF814XIO bam unfiltered alignments ENCSR931HNY ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA1-human ENCAB708RYV DNA False 2016-06-14 ENCODE 2 100 ENCFF165NJF, ENCFF226TLO, ENCFF643CGH 4344109377 ENCODE Processing Pipeline ae3763c768d1c56aefd5307f03b9065a https://www.encodeproject.org/files/ENCFF814XIO/@@download/ENCFF814XIO.bam GRCh38 released low read depth ENCFF427CAA bam alignments ENCSR931HNY ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA1-human ENCAB708RYV DNA False 2016-06-14 ENCODE 1 100 ENCFF033TZD, ENCFF137DWP, ENCFF643CGH 2582870805 ENCODE Processing Pipeline 0fc8845f6ed6a8c0e31fe83ea6693e87 https://www.encodeproject.org/files/ENCFF427CAA/@@download/ENCFF427CAA.bam GRCh38 released low read depth ENCFF314PZG bam alignments ENCSR931HNY ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA1-human ENCAB708RYV DNA False 2016-06-14 ENCODE 2 100 ENCFF165NJF, ENCFF226TLO, ENCFF643CGH 3510760816 ENCODE Processing Pipeline 01127955be0c195a54c8304bfa79ae75 https://www.encodeproject.org/files/ENCFF314PZG/@@download/ENCFF314PZG.bam GRCh38 released low read depth ENCFF103BQB bigWig signal p-value ENCSR931HNY ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA1-human ENCAB708RYV DNA False 2016-06-14 ENCODE 1 ENCFF427CAA, ENCFF910IKB 944247222 ENCODE Processing Pipeline c286e84259de3d212d68f8f82109297e https://www.encodeproject.org/files/ENCFF103BQB/@@download/ENCFF103BQB.bigWig GRCh38 released low read depth ENCFF609VDX bigWig signal p-value ENCSR931HNY ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA1-human ENCAB708RYV DNA False 2016-06-14 ENCODE 2 ENCFF227IZS, ENCFF314PZG 1088538130 ENCODE Processing Pipeline a93b369e7e8201e8ca62024512e6f53f https://www.encodeproject.org/files/ENCFF609VDX/@@download/ENCFF609VDX.bigWig GRCh38 released low read depth ENCFF484FFQ bigWig signal p-value ENCSR931HNY ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA1-human ENCAB708RYV DNA False 2016-06-14 ENCODE 1, 2 ENCFF227IZS, ENCFF314PZG, ENCFF427CAA, ENCFF910IKB 1779966559 ENCODE Processing Pipeline ccc48e7ef13501d4810e670ae0001a6e https://www.encodeproject.org/files/ENCFF484FFQ/@@download/ENCFF484FFQ.bigWig GRCh38 released low read depth ENCFF867SJZ bigWig fold change over control ENCSR931HNY ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA1-human ENCAB708RYV DNA False 2016-06-14 ENCODE 1 ENCFF427CAA, ENCFF910IKB 855880739 ENCODE Processing Pipeline ea7b73a52b09f2446bce57da64f7f2b3 https://www.encodeproject.org/files/ENCFF867SJZ/@@download/ENCFF867SJZ.bigWig GRCh38 released low read depth ENCFF676KXZ bigWig fold change over control ENCSR931HNY ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA1-human ENCAB708RYV DNA False 2016-06-14 ENCODE 2 ENCFF227IZS, ENCFF314PZG 1014561445 ENCODE Processing Pipeline ab4add7115107cfb9e01f68f1af9d028 https://www.encodeproject.org/files/ENCFF676KXZ/@@download/ENCFF676KXZ.bigWig GRCh38 released low read depth ENCFF428TVE bigWig fold change over control ENCSR931HNY ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA1-human ENCAB708RYV DNA False 2016-06-14 ENCODE 1, 2 ENCFF227IZS, ENCFF314PZG, ENCFF427CAA, ENCFF910IKB 1853731769 ENCODE Processing Pipeline 92c882a9b81551084b996a943c5e387c https://www.encodeproject.org/files/ENCFF428TVE/@@download/ENCFF428TVE.bigWig GRCh38 released low read depth ENCFF399LZL bed narrowPeak peaks ENCSR931HNY ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA1-human ENCAB708RYV DNA False 2016-06-14 ENCODE 1 ENCFF427CAA, ENCFF910IKB 6160121 ENCODE Processing Pipeline 426e7ae48529c34482ddc45a60186c55 https://www.encodeproject.org/files/ENCFF399LZL/@@download/ENCFF399LZL.bed.gz GRCh38 released low read depth ENCFF947VSX bed narrowPeak peaks ENCSR931HNY ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA1-human ENCAB708RYV DNA False 2016-06-14 ENCODE 2 ENCFF227IZS, ENCFF314PZG 6561827 ENCODE Processing Pipeline 403f1774e65df6f1b16e1a77848ec318 https://www.encodeproject.org/files/ENCFF947VSX/@@download/ENCFF947VSX.bed.gz GRCh38 released low read depth ENCFF227NAG bed narrowPeak peaks ENCSR931HNY ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA1-human ENCAB708RYV DNA False 2016-06-14 ENCODE 1, 2 ENCFF227IZS, ENCFF314PZG, ENCFF427CAA, ENCFF910IKB 7141205 ENCODE Processing Pipeline 52e9c6e7fe3f409edbd17b62a8cf7605 https://www.encodeproject.org/files/ENCFF227NAG/@@download/ENCFF227NAG.bed.gz GRCh38 released low read depth ENCFF822FZI bigBed narrowPeak peaks ENCSR931HNY ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA1-human ENCAB708RYV DNA False 2016-06-14 ENCODE 1 ENCFF399LZL 13353474 ENCODE Processing Pipeline 03b8633c8578134c15be46b438a2f869 https://www.encodeproject.org/files/ENCFF822FZI/@@download/ENCFF822FZI.bigBed GRCh38 released low read depth ENCFF587EAI bigBed narrowPeak peaks ENCSR931HNY ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA1-human ENCAB708RYV DNA False 2016-06-14 ENCODE 2 ENCFF947VSX 13278468 ENCODE Processing Pipeline 2b604eeed1ef2634b914b23b28552cd7 https://www.encodeproject.org/files/ENCFF587EAI/@@download/ENCFF587EAI.bigBed GRCh38 released low read depth ENCFF663HCO bigBed narrowPeak peaks ENCSR931HNY ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA1-human ENCAB708RYV DNA False 2016-06-14 ENCODE 1, 2 ENCFF227NAG 13203436 ENCODE Processing Pipeline cb29f570a0e60aaa77ccdc4480b82d95 https://www.encodeproject.org/files/ENCFF663HCO/@@download/ENCFF663HCO.bigBed GRCh38 released low read depth ENCFF371FZO bed narrowPeak conservative idr thresholded peaks ENCSR931HNY ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA1-human ENCAB708RYV DNA False 2016-06-14 ENCODE 1, 2 ENCFF227NAG, ENCFF399LZL, ENCFF419RSJ, ENCFF947VSX 172119 ENCODE Processing Pipeline fb425035e45219df7e6857a720b762af https://www.encodeproject.org/files/ENCFF371FZO/@@download/ENCFF371FZO.bed.gz GRCh38 released low read depth ENCFF256JDR bigBed narrowPeak conservative idr thresholded peaks ENCSR931HNY ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA1-human ENCAB708RYV DNA False 2016-06-14 ENCODE 1, 2 ENCFF371FZO 366050 ENCODE Processing Pipeline 136a0b65b827291326db9671a123d31d https://www.encodeproject.org/files/ENCFF256JDR/@@download/ENCFF256JDR.bigBed GRCh38 released low read depth ENCFF382RFJ bed narrowPeak optimal idr thresholded peaks ENCSR931HNY ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA1-human ENCAB708RYV DNA False 2016-06-14 ENCODE 1, 2 ENCFF227NAG, ENCFF399LZL, ENCFF419RSJ, ENCFF947VSX 293750 ENCODE Processing Pipeline 94a6818dd2484bf30baacc328b3f53e3 https://www.encodeproject.org/files/ENCFF382RFJ/@@download/ENCFF382RFJ.bed.gz GRCh38 released low read depth ENCFF073AYZ bigBed narrowPeak optimal idr thresholded peaks ENCSR931HNY ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA1-human ENCAB708RYV DNA False 2016-06-14 ENCODE 1, 2 ENCFF382RFJ 648270 ENCODE Processing Pipeline 5617f02ee9738393afb9a3dce349e89d https://www.encodeproject.org/files/ENCFF073AYZ/@@download/ENCFF073AYZ.bigBed GRCh38 released low read depth ENCFF152WSS bed narrowPeak conservative idr thresholded peaks ENCSR931HNY ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA1-human ENCAB708RYV DNA False 2016-06-14 ENCODE 1, 2 ENCFF001TDO, ENCFF428HHR, ENCFF633IWB, ENCFF786SHU 145412 ENCODE Processing Pipeline 4ded47f7fed94992b16ae022272e8b84 https://www.encodeproject.org/files/ENCFF152WSS/@@download/ENCFF152WSS.bed.gz hg19 released low read depth ENCFF640GGM bigBed narrowPeak conservative idr thresholded peaks ENCSR931HNY ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA1-human ENCAB708RYV DNA False 2016-06-14 ENCODE 1, 2 ENCFF152WSS 329746 ENCODE Processing Pipeline 9ec5bfcb7d110e47f2e9e65ac605c83c https://www.encodeproject.org/files/ENCFF640GGM/@@download/ENCFF640GGM.bigBed hg19 released low read depth ENCFF701NVT bed narrowPeak optimal idr thresholded peaks ENCSR931HNY ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA1-human ENCAB708RYV DNA False 2016-06-14 ENCODE 1, 2 ENCFF001TDO, ENCFF428HHR, ENCFF633IWB, ENCFF786SHU 243759 ENCODE Processing Pipeline 2d4ce296af6dc930e1ec43681398c171 https://www.encodeproject.org/files/ENCFF701NVT/@@download/ENCFF701NVT.bed.gz hg19 released low read depth ENCFF686EVC bigBed narrowPeak optimal idr thresholded peaks ENCSR931HNY ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA1-human ENCAB708RYV DNA False 2016-06-14 ENCODE 1, 2 ENCFF701NVT 461258 ENCODE Processing Pipeline 2bf84544af86cba6c64f2ceb3062671c https://www.encodeproject.org/files/ENCFF686EVC/@@download/ENCFF686EVC.bigBed hg19 released low read depth ENCFF622IRP fastq reads ENCSR349TZO ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA2-human ENCAB062SOF DNA False 2018-01-26 ENCODE 1 1 100 paired-ended 2 ENCFF483DQG 4005940551 Michael Snyder, Stanford e08e4aca7564ca48839154a9b42afc47 https://www.encodeproject.org/files/ENCFF622IRP/@@download/ENCFF622IRP.fastq.gz Illumina HiSeq 4000 /files/ENCFF502GTS/ released mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF699WWO fastq reads ENCSR349TZO ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA2-human ENCAB062SOF DNA False 2018-01-26 ENCODE 2 1 100 paired-ended 1 ENCFF864GEB 6570123637 Michael Snyder, Stanford dcde46f116ad3624d8f3bfe5237c9b22 https://www.encodeproject.org/files/ENCFF699WWO/@@download/ENCFF699WWO.fastq.gz Illumina HiSeq 4000 /files/ENCFF259GQA/ released mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF864GEB fastq reads ENCSR349TZO ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA2-human ENCAB062SOF DNA False 2018-01-26 ENCODE 2 1 100 paired-ended 2 ENCFF699WWO 7446589928 Michael Snyder, Stanford eb10f5f248d3be118c009a756447f5e7 https://www.encodeproject.org/files/ENCFF864GEB/@@download/ENCFF864GEB.fastq.gz Illumina HiSeq 4000 /files/ENCFF837MIV/ released mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF483DQG fastq reads ENCSR349TZO ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA2-human ENCAB062SOF DNA False 2018-01-26 ENCODE 1 1 100 paired-ended 1 ENCFF622IRP 3803268821 Michael Snyder, Stanford 0b986d00b10cb840232b5658e518ad40 https://www.encodeproject.org/files/ENCFF483DQG/@@download/ENCFF483DQG.fastq.gz Illumina HiSeq 4000 /files/ENCFF498JMO/ released mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF266NEQ bam unfiltered alignments ENCSR349TZO ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA2-human ENCAB062SOF DNA False 2018-01-26 ENCODE 1 100 ENCFF483DQG, ENCFF622IRP, ENCFF807MUK 7310421961 ENCODE Processing Pipeline 703f3ef4a15e649f67e7f3b1f57f47f5 https://www.encodeproject.org/files/ENCFF266NEQ/@@download/ENCFF266NEQ.bam hg19 released mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF015UYQ bam unfiltered alignments ENCSR349TZO ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA2-human ENCAB062SOF DNA False 2018-01-26 ENCODE 1 100 ENCFF483DQG, ENCFF622IRP, ENCFF643CGH 7320119076 ENCODE Processing Pipeline ee623e73166130eaecc0971b56551819 https://www.encodeproject.org/files/ENCFF015UYQ/@@download/ENCFF015UYQ.bam GRCh38 released mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF266MRA bam unfiltered alignments ENCSR349TZO ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA2-human ENCAB062SOF DNA False 2018-01-26 ENCODE 2 100 ENCFF699WWO, ENCFF807MUK, ENCFF864GEB 11592770961 ENCODE Processing Pipeline a914bfab281b8fbaf6d34ab1212a2fbd https://www.encodeproject.org/files/ENCFF266MRA/@@download/ENCFF266MRA.bam hg19 released mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF669PBX bam unfiltered alignments ENCSR349TZO ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA2-human ENCAB062SOF DNA False 2018-01-26 ENCODE 2 100 ENCFF643CGH, ENCFF699WWO, ENCFF864GEB 11590840481 ENCODE Processing Pipeline f4459005b089a4aafa54b9f256cfe623 https://www.encodeproject.org/files/ENCFF669PBX/@@download/ENCFF669PBX.bam GRCh38 released mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF571KDO bam alignments ENCSR349TZO ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA2-human ENCAB062SOF DNA False 2018-01-26 ENCODE 1 100 ENCFF483DQG, ENCFF622IRP, ENCFF807MUK 5494356551 ENCODE Processing Pipeline 3e8172cd0e828efa9ebf4966588a2838 https://www.encodeproject.org/files/ENCFF571KDO/@@download/ENCFF571KDO.bam hg19 released mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF903QIT bam alignments ENCSR349TZO ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA2-human ENCAB062SOF DNA False 2018-01-26 ENCODE 1 100 ENCFF483DQG, ENCFF622IRP, ENCFF643CGH 5505067428 ENCODE Processing Pipeline 8e8bf853066d2afc3d769a0f19301862 https://www.encodeproject.org/files/ENCFF903QIT/@@download/ENCFF903QIT.bam GRCh38 released mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF510THU bam alignments ENCSR349TZO ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA2-human ENCAB062SOF DNA False 2018-01-26 ENCODE 2 100 ENCFF643CGH, ENCFF699WWO, ENCFF864GEB 5745482112 ENCODE Processing Pipeline 0690c51cf39a56d99c9b46043f1e26ca https://www.encodeproject.org/files/ENCFF510THU/@@download/ENCFF510THU.bam GRCh38 released mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF658KLO bam alignments ENCSR349TZO ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA2-human ENCAB062SOF DNA False 2018-01-26 ENCODE 2 100 ENCFF699WWO, ENCFF807MUK, ENCFF864GEB 5739974618 ENCODE Processing Pipeline 8d756f3683bd89a787eeeba4a1bd0c1a https://www.encodeproject.org/files/ENCFF658KLO/@@download/ENCFF658KLO.bam hg19 released mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF195PLV bigWig signal p-value ENCSR349TZO ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA2-human ENCAB062SOF DNA False 2018-01-26 ENCODE 1 ENCFF160VXC, ENCFF571KDO, ENCFF834TUP 1952664388 ENCODE Processing Pipeline 1167600530aee7fe8a5531144a755f07 https://www.encodeproject.org/files/ENCFF195PLV/@@download/ENCFF195PLV.bigWig hg19 released mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF251AWP bigWig signal p-value ENCSR349TZO ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA2-human ENCAB062SOF DNA False 2018-01-26 ENCODE 2 ENCFF658KLO, ENCFF834TUP 1526018292 ENCODE Processing Pipeline 5f1a19e973b2c9ae6d4e6b4443668049 https://www.encodeproject.org/files/ENCFF251AWP/@@download/ENCFF251AWP.bigWig hg19 released mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF647TGL bigWig signal p-value ENCSR349TZO ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA2-human ENCAB062SOF DNA False 2018-01-26 ENCODE 1, 2 ENCFF160VXC, ENCFF571KDO, ENCFF658KLO, ENCFF834TUP 2386761091 ENCODE Processing Pipeline 621c58673ae590e3f373bf9f25a0ec26 https://www.encodeproject.org/files/ENCFF647TGL/@@download/ENCFF647TGL.bigWig hg19 released mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF979ULJ bigWig fold change over control ENCSR349TZO ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA2-human ENCAB062SOF DNA False 2018-01-26 ENCODE 1 ENCFF160VXC, ENCFF571KDO, ENCFF834TUP 2065610471 ENCODE Processing Pipeline 17f92808d8bce688ea98c9838d2ac786 https://www.encodeproject.org/files/ENCFF979ULJ/@@download/ENCFF979ULJ.bigWig hg19 released mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF402OJZ bigWig fold change over control ENCSR349TZO ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA2-human ENCAB062SOF DNA False 2018-01-26 ENCODE 2 ENCFF658KLO, ENCFF834TUP 1705076624 ENCODE Processing Pipeline 9f3110ba4d130b4b5315aa332ba57b54 https://www.encodeproject.org/files/ENCFF402OJZ/@@download/ENCFF402OJZ.bigWig hg19 released mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF410NKD bigWig fold change over control ENCSR349TZO ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA2-human ENCAB062SOF DNA False 2018-01-26 ENCODE 1, 2 ENCFF160VXC, ENCFF571KDO, ENCFF658KLO, ENCFF834TUP 2731741194 ENCODE Processing Pipeline f4dfdec8f8cfc21f47aaac381802d14f https://www.encodeproject.org/files/ENCFF410NKD/@@download/ENCFF410NKD.bigWig hg19 released mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF917NDP bed narrowPeak peaks ENCSR349TZO ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA2-human ENCAB062SOF DNA False 2018-01-26 ENCODE 1, 2 ENCFF160VXC, ENCFF571KDO, ENCFF658KLO, ENCFF834TUP 7281434 ENCODE Processing Pipeline 22be7271bc049d3a511eb197c0c71f03 https://www.encodeproject.org/files/ENCFF917NDP/@@download/ENCFF917NDP.bed.gz hg19 released mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF296OXW bigBed narrowPeak peaks ENCSR349TZO ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA2-human ENCAB062SOF DNA False 2018-01-26 ENCODE 2 ENCFF550GTF 10796336 ENCODE Processing Pipeline 5c2f241c301fcb189cda82f168a42528 https://www.encodeproject.org/files/ENCFF296OXW/@@download/ENCFF296OXW.bigBed hg19 released mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF298IEA bigBed narrowPeak peaks ENCSR349TZO ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA2-human ENCAB062SOF DNA False 2018-01-26 ENCODE 1 ENCFF162LKJ 11057404 ENCODE Processing Pipeline a0a6fb0f79ae55079a8bb9551e39f879 https://www.encodeproject.org/files/ENCFF298IEA/@@download/ENCFF298IEA.bigBed hg19 released mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF922TDM bed narrowPeak optimal idr thresholded peaks ENCSR349TZO ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA2-human ENCAB062SOF DNA False 2018-01-26 ENCODE 1, 2 ENCFF001TDO, ENCFF162LKJ, ENCFF550GTF, ENCFF917NDP 75060 ENCODE Processing Pipeline 41ea12a0fe93278e96a648164c7ae3b8 https://www.encodeproject.org/files/ENCFF922TDM/@@download/ENCFF922TDM.bed.gz hg19 released mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF162LKJ bed narrowPeak peaks ENCSR349TZO ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA2-human ENCAB062SOF DNA False 2018-01-26 ENCODE 1 ENCFF160VXC, ENCFF571KDO, ENCFF834TUP 6957983 ENCODE Processing Pipeline 7320713e5f6becb5840da5d1bc1c7f89 https://www.encodeproject.org/files/ENCFF162LKJ/@@download/ENCFF162LKJ.bed.gz hg19 released mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF550GTF bed narrowPeak peaks ENCSR349TZO ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA2-human ENCAB062SOF DNA False 2018-01-26 ENCODE 2 ENCFF658KLO, ENCFF834TUP 7036947 ENCODE Processing Pipeline 8cd478c9e0feffc9ef67b0abe72cf734 https://www.encodeproject.org/files/ENCFF550GTF/@@download/ENCFF550GTF.bed.gz hg19 released mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF080HPG bigBed narrowPeak optimal idr thresholded peaks ENCSR349TZO ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA2-human ENCAB062SOF DNA False 2018-01-26 ENCODE 1, 2 ENCFF922TDM 205484 ENCODE Processing Pipeline d6c448a1a56304bdf427c75787187456 https://www.encodeproject.org/files/ENCFF080HPG/@@download/ENCFF080HPG.bigBed hg19 released mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF415GRK bigBed narrowPeak conservative idr thresholded peaks ENCSR349TZO ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA2-human ENCAB062SOF DNA False 2018-01-26 ENCODE 1, 2 ENCFF082PCH 177608 ENCODE Processing Pipeline d64d1718150b11f3b9d4d2f73759e55f https://www.encodeproject.org/files/ENCFF415GRK/@@download/ENCFF415GRK.bigBed hg19 released mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF009UEL bigBed narrowPeak peaks ENCSR349TZO ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA2-human ENCAB062SOF DNA False 2018-01-26 ENCODE 1, 2 ENCFF917NDP 13213152 ENCODE Processing Pipeline 59e26a58990b33db99ce4e1e53e6116f https://www.encodeproject.org/files/ENCFF009UEL/@@download/ENCFF009UEL.bigBed hg19 released mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF082PCH bed narrowPeak conservative idr thresholded peaks ENCSR349TZO ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA2-human ENCAB062SOF DNA False 2018-01-26 ENCODE 1, 2 ENCFF001TDO, ENCFF162LKJ, ENCFF550GTF, ENCFF917NDP 57696 ENCODE Processing Pipeline 9ba45d7c7b6998e44d37518312210190 https://www.encodeproject.org/files/ENCFF082PCH/@@download/ENCFF082PCH.bed.gz hg19 released mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF183TMP bigWig signal p-value ENCSR349TZO ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA2-human ENCAB062SOF DNA False 2018-01-26 ENCODE 1 ENCFF712WXB, ENCFF790TAN, ENCFF903QIT 1656705751 ENCODE Processing Pipeline 6346aefad4060686633e71096d8d5011 https://www.encodeproject.org/files/ENCFF183TMP/@@download/ENCFF183TMP.bigWig GRCh38 released mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF884BQL bigWig signal p-value ENCSR349TZO ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA2-human ENCAB062SOF DNA False 2018-01-26 ENCODE 2 ENCFF510THU, ENCFF712WXB 1532328766 ENCODE Processing Pipeline d9efbba994bbf294fd6f878b9b037d5d https://www.encodeproject.org/files/ENCFF884BQL/@@download/ENCFF884BQL.bigWig GRCh38 released mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF919FUK bigWig signal p-value ENCSR349TZO ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA2-human ENCAB062SOF DNA False 2018-01-26 ENCODE 1, 2 ENCFF510THU, ENCFF712WXB, ENCFF790TAN, ENCFF903QIT 2411749771 ENCODE Processing Pipeline fb82b53fe5a494c2b93a06301973011d https://www.encodeproject.org/files/ENCFF919FUK/@@download/ENCFF919FUK.bigWig GRCh38 released mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF042ZIT bigWig fold change over control ENCSR349TZO ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA2-human ENCAB062SOF DNA False 2018-01-26 ENCODE 1 ENCFF712WXB, ENCFF790TAN, ENCFF903QIT 2068737326 ENCODE Processing Pipeline bf47eca7b4cc2330d27fb83d974bfa29 https://www.encodeproject.org/files/ENCFF042ZIT/@@download/ENCFF042ZIT.bigWig GRCh38 released mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF995YDO bigWig fold change over control ENCSR349TZO ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA2-human ENCAB062SOF DNA False 2018-01-26 ENCODE 2 ENCFF510THU, ENCFF712WXB 1713083195 ENCODE Processing Pipeline bac6bc5f60d28db78bee1c078af32127 https://www.encodeproject.org/files/ENCFF995YDO/@@download/ENCFF995YDO.bigWig GRCh38 released mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF086KNG bigWig fold change over control ENCSR349TZO ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA2-human ENCAB062SOF DNA False 2018-01-26 ENCODE 1, 2 ENCFF510THU, ENCFF712WXB, ENCFF790TAN, ENCFF903QIT 2750675486 ENCODE Processing Pipeline 6fdcd72713952bf2c6dddbc572f437b1 https://www.encodeproject.org/files/ENCFF086KNG/@@download/ENCFF086KNG.bigWig GRCh38 released mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF063BWB bed narrowPeak peaks ENCSR349TZO ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA2-human ENCAB062SOF DNA False 2018-01-26 ENCODE 1 ENCFF712WXB, ENCFF790TAN, ENCFF903QIT 6863055 ENCODE Processing Pipeline f15697828b8f596d1cfa5958ec6575d9 https://www.encodeproject.org/files/ENCFF063BWB/@@download/ENCFF063BWB.bed.gz GRCh38 released mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF733VAS bigBed narrowPeak peaks ENCSR349TZO ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA2-human ENCAB062SOF DNA False 2018-01-26 ENCODE 1 ENCFF063BWB 11078860 ENCODE Processing Pipeline 40a094d73654501e8ee7f5c714faac18 https://www.encodeproject.org/files/ENCFF733VAS/@@download/ENCFF733VAS.bigBed GRCh38 released mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF724RDX bigBed narrowPeak peaks ENCSR349TZO ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA2-human ENCAB062SOF DNA False 2018-01-26 ENCODE 2 ENCFF400JVN 10808353 ENCODE Processing Pipeline 5311bdc887d817d7a7eb392af539225c https://www.encodeproject.org/files/ENCFF724RDX/@@download/ENCFF724RDX.bigBed GRCh38 released mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF400JVN bed narrowPeak peaks ENCSR349TZO ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA2-human ENCAB062SOF DNA False 2018-01-26 ENCODE 2 ENCFF510THU, ENCFF712WXB 6965342 ENCODE Processing Pipeline 8823840509fe09ae3b84ec85efbcc182 https://www.encodeproject.org/files/ENCFF400JVN/@@download/ENCFF400JVN.bed.gz GRCh38 released mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF757RZT bigBed narrowPeak peaks ENCSR349TZO ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA2-human ENCAB062SOF DNA False 2018-01-26 ENCODE 1, 2 ENCFF519GUH 13239728 ENCODE Processing Pipeline 03a2f84df123ad76f3c3365e11dda086 https://www.encodeproject.org/files/ENCFF757RZT/@@download/ENCFF757RZT.bigBed GRCh38 released mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF519GUH bed narrowPeak peaks ENCSR349TZO ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA2-human ENCAB062SOF DNA False 2018-01-26 ENCODE 1, 2 ENCFF510THU, ENCFF712WXB, ENCFF790TAN, ENCFF903QIT 7287103 ENCODE Processing Pipeline 951cd859c1af33fe38bc59a473781806 https://www.encodeproject.org/files/ENCFF519GUH/@@download/ENCFF519GUH.bed.gz GRCh38 released mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF977FJV bigBed narrowPeak optimal idr thresholded peaks ENCSR349TZO ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA2-human ENCAB062SOF DNA False 2018-01-26 ENCODE 1, 2 ENCFF584SNZ 209209 ENCODE Processing Pipeline 553968be42dbc0de85bc2d24ff66728a https://www.encodeproject.org/files/ENCFF977FJV/@@download/ENCFF977FJV.bigBed GRCh38 released mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF097AKG bed narrowPeak conservative idr thresholded peaks ENCSR349TZO ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA2-human ENCAB062SOF DNA False 2018-01-26 ENCODE 1, 2 ENCFF063BWB, ENCFF400JVN, ENCFF419RSJ, ENCFF519GUH 57967 ENCODE Processing Pipeline 41687a50fc2f72b7078d66894c8a9471 https://www.encodeproject.org/files/ENCFF097AKG/@@download/ENCFF097AKG.bed.gz GRCh38 released mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF231VLP bigBed narrowPeak conservative idr thresholded peaks ENCSR349TZO ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA2-human ENCAB062SOF DNA False 2018-01-26 ENCODE 1, 2 ENCFF097AKG 179514 ENCODE Processing Pipeline 2ec77cfb88e5d02746f4fff540087295 https://www.encodeproject.org/files/ENCFF231VLP/@@download/ENCFF231VLP.bigBed GRCh38 released mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF584SNZ bed narrowPeak optimal idr thresholded peaks ENCSR349TZO ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA2-human ENCAB062SOF DNA False 2018-01-26 ENCODE 1, 2 ENCFF063BWB, ENCFF400JVN, ENCFF419RSJ, ENCFF519GUH 75816 ENCODE Processing Pipeline 28d8b072c63a6142f93a5014827e57d0 https://www.encodeproject.org/files/ENCFF584SNZ/@@download/ENCFF584SNZ.bed.gz GRCh38 released mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF680USE bam unfiltered alignments ENCSR596IKD ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ETS2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 2 100 ENCFF807MUK, ENCFF817VCN, ENCFF947BPK 8132003265 ENCODE Processing Pipeline 5042d7a038208000c17b8abb62329146 https://www.encodeproject.org/files/ENCFF680USE/@@download/ENCFF680USE.bam hg19 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO poor library complexity, severe bottlenecking missing control alignments ENCFF771OKD bam unfiltered alignments ENCSR596IKD ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ETS2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1 100 ENCFF466RJA, ENCFF548XLM, ENCFF807MUK 8258866300 ENCODE Processing Pipeline cd77adad49dca2401f170dc4f6266927 https://www.encodeproject.org/files/ENCFF771OKD/@@download/ENCFF771OKD.bam hg19 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO poor library complexity, severe bottlenecking missing control alignments ENCFF466RJA fastq reads ENCSR596IKD ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ETS2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1 1 100 paired-ended 1 ENCFF548XLM 4274091097 Michael Snyder, Stanford ece3d3ec1d25e7a5cd146280d6abaea0 https://www.encodeproject.org/files/ENCFF466RJA/@@download/ENCFF466RJA.fastq.gz Illumina HiSeq 2000 /files/ENCFF258YTR/, /files/ENCFF910GLH/ released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO poor library complexity, severe bottlenecking missing control alignments ENCFF548XLM fastq reads ENCSR596IKD ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ETS2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1 1 100 paired-ended 2 ENCFF466RJA 4257110483 Michael Snyder, Stanford 388aa52aa16240f79bdb9ace570ffcfd https://www.encodeproject.org/files/ENCFF548XLM/@@download/ENCFF548XLM.fastq.gz Illumina HiSeq 2000 /files/ENCFF258YTR/, /files/ENCFF910GLH/ released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO poor library complexity, severe bottlenecking missing control alignments ENCFF947BPK fastq reads ENCSR596IKD ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ETS2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 2 1 100 paired-ended 1 ENCFF817VCN 4041966766 Michael Snyder, Stanford d5d00124352ad776527e90769ee2b7e4 https://www.encodeproject.org/files/ENCFF947BPK/@@download/ENCFF947BPK.fastq.gz Illumina HiSeq 2000 /files/ENCFF258YTR/, /files/ENCFF910GLH/ released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO poor library complexity, severe bottlenecking missing control alignments ENCFF817VCN fastq reads ENCSR596IKD ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ETS2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 2 1 100 paired-ended 2 ENCFF947BPK 4015270451 Michael Snyder, Stanford 299bf1684ee87ae36ef2504aad7eca21 https://www.encodeproject.org/files/ENCFF817VCN/@@download/ENCFF817VCN.fastq.gz Illumina HiSeq 2000 /files/ENCFF258YTR/, /files/ENCFF910GLH/ released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO poor library complexity, severe bottlenecking missing control alignments ENCFF746MMS bam alignments ENCSR596IKD ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ETS2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 2 ENCFF807MUK, ENCFF817VCN, ENCFF947BPK 5071212190 ENCODE Processing Pipeline bdbaba8bc3dc5059aeefc693887d3d23 https://www.encodeproject.org/files/ENCFF746MMS/@@download/ENCFF746MMS.bam hg19 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO poor library complexity, severe bottlenecking missing control alignments ENCFF968SMN bam alignments ENCSR596IKD ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ETS2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1 ENCFF466RJA, ENCFF548XLM, ENCFF807MUK 4062031294 ENCODE Processing Pipeline 37d0c49610ba06f535a835a7917a1af3 https://www.encodeproject.org/files/ENCFF968SMN/@@download/ENCFF968SMN.bam hg19 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO poor library complexity, severe bottlenecking missing control alignments ENCFF148JBZ bigWig signal p-value ENCSR596IKD ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ETS2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 2 ENCFF139VKC, ENCFF746MMS 1257203475 ENCODE Processing Pipeline 01e851b10a0b3f1cb65eff159c21b444 https://www.encodeproject.org/files/ENCFF148JBZ/@@download/ENCFF148JBZ.bigWig hg19 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO poor library complexity, severe bottlenecking missing control alignments ENCFF363LIG bigWig signal p-value ENCSR596IKD ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ETS2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1 ENCFF139VKC, ENCFF968SMN 1170079412 ENCODE Processing Pipeline 39d5da02e1c9cf5b621ac2d9121cdf3e https://www.encodeproject.org/files/ENCFF363LIG/@@download/ENCFF363LIG.bigWig hg19 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO poor library complexity, severe bottlenecking missing control alignments ENCFF513JDH bigWig fold change over control ENCSR596IKD ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ETS2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF139VKC, ENCFF746MMS, ENCFF968SMN 1808415892 ENCODE Processing Pipeline 25164b8f154a659bff3082d3ce2498e6 https://www.encodeproject.org/files/ENCFF513JDH/@@download/ENCFF513JDH.bigWig hg19 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO poor library complexity, severe bottlenecking missing control alignments ENCFF804AYO bed narrowPeak peaks ENCSR596IKD ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ETS2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1 ENCFF139VKC, ENCFF968SMN 6110096 ENCODE Processing Pipeline 5794fc2a4328b650b1c513b414fb8761 https://www.encodeproject.org/files/ENCFF804AYO/@@download/ENCFF804AYO.bed.gz hg19 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO poor library complexity, severe bottlenecking missing control alignments ENCFF331IWR bed narrowPeak peaks ENCSR596IKD ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ETS2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 2 ENCFF139VKC, ENCFF746MMS 6433989 ENCODE Processing Pipeline 8b87c22a1102272fd3558db70746d291 https://www.encodeproject.org/files/ENCFF331IWR/@@download/ENCFF331IWR.bed.gz hg19 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO poor library complexity, severe bottlenecking missing control alignments ENCFF392QMP bed narrowPeak conservative idr thresholded peaks ENCSR596IKD ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ETS2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF001TDO, ENCFF331IWR, ENCFF804AYO, ENCFF982UOO 19756 ENCODE Processing Pipeline 1432f04cc5fa7a467c568fc0ad045570 https://www.encodeproject.org/files/ENCFF392QMP/@@download/ENCFF392QMP.bed.gz hg19 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO poor library complexity, severe bottlenecking missing control alignments ENCFF367RZF bigBed narrowPeak conservative idr thresholded peaks ENCSR596IKD ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ETS2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF392QMP 96838 ENCODE Processing Pipeline e7c0353028a907bbc9690d2b8070144f https://www.encodeproject.org/files/ENCFF367RZF/@@download/ENCFF367RZF.bigBed hg19 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO poor library complexity, severe bottlenecking missing control alignments ENCFF772HOY bed narrowPeak optimal idr thresholded peaks ENCSR596IKD ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ETS2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF001TDO, ENCFF331IWR, ENCFF804AYO, ENCFF982UOO 34602 ENCODE Processing Pipeline 8faf266dc68894e370a91f3389c162da https://www.encodeproject.org/files/ENCFF772HOY/@@download/ENCFF772HOY.bed.gz hg19 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO poor library complexity, severe bottlenecking missing control alignments ENCFF924AKU bigWig signal p-value ENCSR596IKD ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ETS2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF139VKC, ENCFF746MMS, ENCFF968SMN 1426863714 ENCODE Processing Pipeline 8cb7736bdab40edc548a62f864a3637d https://www.encodeproject.org/files/ENCFF924AKU/@@download/ENCFF924AKU.bigWig hg19 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO poor library complexity, severe bottlenecking missing control alignments ENCFF905SUP bigWig fold change over control ENCSR596IKD ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ETS2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1 ENCFF139VKC, ENCFF968SMN 1132175625 ENCODE Processing Pipeline dc15babcac021d6a1f0e57c78a208d7f https://www.encodeproject.org/files/ENCFF905SUP/@@download/ENCFF905SUP.bigWig hg19 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO poor library complexity, severe bottlenecking missing control alignments ENCFF244PQZ bigWig fold change over control ENCSR596IKD ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ETS2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 2 ENCFF139VKC, ENCFF746MMS 1274831589 ENCODE Processing Pipeline fa29063068167a9ae993374260ed1ca1 https://www.encodeproject.org/files/ENCFF244PQZ/@@download/ENCFF244PQZ.bigWig hg19 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO poor library complexity, severe bottlenecking missing control alignments ENCFF485XNX bigBed narrowPeak peaks ENCSR596IKD ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ETS2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 2 ENCFF331IWR 11124876 ENCODE Processing Pipeline f44566812ee7d6bc331a85c65a149b74 https://www.encodeproject.org/files/ENCFF485XNX/@@download/ENCFF485XNX.bigBed hg19 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO poor library complexity, severe bottlenecking missing control alignments ENCFF982UOO bed narrowPeak peaks ENCSR596IKD ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ETS2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF139VKC, ENCFF746MMS, ENCFF968SMN 6975338 ENCODE Processing Pipeline 859b1874edcfbdb6ff6c90c8071fb9af https://www.encodeproject.org/files/ENCFF982UOO/@@download/ENCFF982UOO.bed.gz hg19 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO poor library complexity, severe bottlenecking missing control alignments ENCFF196MAF bigBed narrowPeak peaks ENCSR596IKD ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ETS2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1 ENCFF804AYO 11159886 ENCODE Processing Pipeline 20ee03c753cc4a63806323864bf4b371 https://www.encodeproject.org/files/ENCFF196MAF/@@download/ENCFF196MAF.bigBed hg19 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO poor library complexity, severe bottlenecking missing control alignments ENCFF556HRN bigBed narrowPeak peaks ENCSR596IKD ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ETS2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF982UOO 11055389 ENCODE Processing Pipeline 9c44c96f43152cd702e5c7c78ec6573d https://www.encodeproject.org/files/ENCFF556HRN/@@download/ENCFF556HRN.bigBed hg19 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO poor library complexity, severe bottlenecking missing control alignments ENCFF659LVV bigBed narrowPeak optimal idr thresholded peaks ENCSR596IKD ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ETS2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF772HOY 122830 ENCODE Processing Pipeline ccb3f24529d4b57bac2db2536c9c6e2f https://www.encodeproject.org/files/ENCFF659LVV/@@download/ENCFF659LVV.bigBed hg19 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO poor library complexity, severe bottlenecking missing control alignments ENCFF848MVQ bam unfiltered alignments ENCSR596IKD ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ETS2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1 100 ENCFF466RJA, ENCFF548XLM, ENCFF643CGH 8257428249 ENCODE Processing Pipeline 4114d1b9fc1126a7d740fe6ffa8b7f59 https://www.encodeproject.org/files/ENCFF848MVQ/@@download/ENCFF848MVQ.bam GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO poor library complexity, severe bottlenecking missing control alignments ENCFF705TUS bam unfiltered alignments ENCSR596IKD ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ETS2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 2 100 ENCFF643CGH, ENCFF817VCN, ENCFF947BPK 8135811386 ENCODE Processing Pipeline 73d2b07474f42b6881504b971fc854f6 https://www.encodeproject.org/files/ENCFF705TUS/@@download/ENCFF705TUS.bam GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO poor library complexity, severe bottlenecking missing control alignments ENCFF950PAH bam alignments ENCSR596IKD ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ETS2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1 100 ENCFF466RJA, ENCFF548XLM, ENCFF643CGH 4064900050 ENCODE Processing Pipeline c70fdd7c8e582ee8536b77cc8d866999 https://www.encodeproject.org/files/ENCFF950PAH/@@download/ENCFF950PAH.bam GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO poor library complexity, severe bottlenecking missing control alignments ENCFF535SSL bam alignments ENCSR596IKD ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ETS2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 2 100 ENCFF643CGH, ENCFF817VCN, ENCFF947BPK 5074239151 ENCODE Processing Pipeline 2095dee3e225513ea6f86d455075e130 https://www.encodeproject.org/files/ENCFF535SSL/@@download/ENCFF535SSL.bam GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO poor library complexity, severe bottlenecking missing control alignments ENCFF929MKG bigWig signal p-value ENCSR596IKD ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ETS2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1 ENCFF950PAH 1171384357 ENCODE Processing Pipeline 448958de5f8774df50f265db764a4621 https://www.encodeproject.org/files/ENCFF929MKG/@@download/ENCFF929MKG.bigWig GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO poor library complexity, severe bottlenecking missing control alignments ENCFF381RXH bigWig signal p-value ENCSR596IKD ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ETS2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 2 ENCFF535SSL 1214858706 ENCODE Processing Pipeline 66fbb515ff88bcfc99384b7cf22b6107 https://www.encodeproject.org/files/ENCFF381RXH/@@download/ENCFF381RXH.bigWig GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO poor library complexity, severe bottlenecking missing control alignments ENCFF278ZSN bigWig signal p-value ENCSR596IKD ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ETS2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF535SSL, ENCFF950PAH 1429472467 ENCODE Processing Pipeline bc76973bfce2723b2c954c2aa2fe3d96 https://www.encodeproject.org/files/ENCFF278ZSN/@@download/ENCFF278ZSN.bigWig GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO poor library complexity, severe bottlenecking missing control alignments ENCFF736DKP bigWig fold change over control ENCSR596IKD ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ETS2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1 ENCFF950PAH 1118699044 ENCODE Processing Pipeline 0f1d0122d1168f340bdad58ac6c5526b https://www.encodeproject.org/files/ENCFF736DKP/@@download/ENCFF736DKP.bigWig GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO poor library complexity, severe bottlenecking missing control alignments ENCFF465DWO bigWig fold change over control ENCSR596IKD ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ETS2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 2 ENCFF535SSL 1280852396 ENCODE Processing Pipeline 18af27249db7eee658798497ed0a8013 https://www.encodeproject.org/files/ENCFF465DWO/@@download/ENCFF465DWO.bigWig GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO poor library complexity, severe bottlenecking missing control alignments ENCFF597XDB bigWig fold change over control ENCSR596IKD ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ETS2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF535SSL, ENCFF950PAH 1811069466 ENCODE Processing Pipeline 0cdc30daaeb9590fce22dd1c8376181b https://www.encodeproject.org/files/ENCFF597XDB/@@download/ENCFF597XDB.bigWig GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO poor library complexity, severe bottlenecking missing control alignments ENCFF333QUP bed narrowPeak peaks ENCSR596IKD ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ETS2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 2 ENCFF535SSL 6277205 ENCODE Processing Pipeline 9d57ae2cdd0ee53fc4a015fbbf33fe7a https://www.encodeproject.org/files/ENCFF333QUP/@@download/ENCFF333QUP.bed.gz GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO poor library complexity, severe bottlenecking missing control alignments ENCFF643MHD bigBed narrowPeak peaks ENCSR596IKD ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ETS2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 2 ENCFF333QUP 11135397 ENCODE Processing Pipeline e55fb27962aacc781c9dee456711b90f https://www.encodeproject.org/files/ENCFF643MHD/@@download/ENCFF643MHD.bigBed GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO poor library complexity, severe bottlenecking missing control alignments ENCFF229CJE bigBed narrowPeak peaks ENCSR596IKD ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ETS2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF834LHN 11074277 ENCODE Processing Pipeline 7ecfdc42d81e237f058fa2fed7b21e0e https://www.encodeproject.org/files/ENCFF229CJE/@@download/ENCFF229CJE.bigBed GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO poor library complexity, severe bottlenecking missing control alignments ENCFF687OMH bed narrowPeak optimal idr thresholded peaks ENCSR596IKD ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ETS2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF333QUP, ENCFF419RSJ, ENCFF515APP, ENCFF834LHN 33536 ENCODE Processing Pipeline 17227c49db14dbcd7b6f29f75d53c412 https://www.encodeproject.org/files/ENCFF687OMH/@@download/ENCFF687OMH.bed.gz GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO poor library complexity, severe bottlenecking missing control alignments ENCFF279SQL bigBed narrowPeak optimal idr thresholded peaks ENCSR596IKD ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ETS2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF687OMH 123200 ENCODE Processing Pipeline 2792afff45f5efe46adcf101d3d9eb71 https://www.encodeproject.org/files/ENCFF279SQL/@@download/ENCFF279SQL.bigBed GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO poor library complexity, severe bottlenecking missing control alignments ENCFF515APP bed narrowPeak peaks ENCSR596IKD ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ETS2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1 ENCFF950PAH 5958060 ENCODE Processing Pipeline 29f0063eb1bb8fb250c242f3c0a58d84 https://www.encodeproject.org/files/ENCFF515APP/@@download/ENCFF515APP.bed.gz GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO poor library complexity, severe bottlenecking missing control alignments ENCFF834LHN bed narrowPeak peaks ENCSR596IKD ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ETS2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF535SSL, ENCFF950PAH 6886626 ENCODE Processing Pipeline 18c33709ae53bc4ecbbec3d6cc8406b7 https://www.encodeproject.org/files/ENCFF834LHN/@@download/ENCFF834LHN.bed.gz GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO poor library complexity, severe bottlenecking missing control alignments ENCFF756TWQ bigBed narrowPeak peaks ENCSR596IKD ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ETS2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1 ENCFF515APP 11163665 ENCODE Processing Pipeline d515e653a1ff276affc0837459fe69a0 https://www.encodeproject.org/files/ENCFF756TWQ/@@download/ENCFF756TWQ.bigBed GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO poor library complexity, severe bottlenecking missing control alignments ENCFF149PSG bed narrowPeak conservative idr thresholded peaks ENCSR596IKD ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ETS2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF333QUP, ENCFF419RSJ, ENCFF515APP, ENCFF834LHN 19600 ENCODE Processing Pipeline 875ae09e10e568aae0e80addbff2915e https://www.encodeproject.org/files/ENCFF149PSG/@@download/ENCFF149PSG.bed.gz GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO poor library complexity, severe bottlenecking missing control alignments ENCFF383ZCN bigBed narrowPeak conservative idr thresholded peaks ENCSR596IKD ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ETS2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF149PSG 98676 ENCODE Processing Pipeline 61d791b78735b603690584933a8c477c https://www.encodeproject.org/files/ENCFF383ZCN/@@download/ENCFF383ZCN.bigBed GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO poor library complexity, severe bottlenecking missing control alignments ENCFF000YJZ bam alignments ENCSR000EZV ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 1 ENCFF000YPA 405110595 Sherman Weissman, Yale 6ca25dac2980d8af4c93e0e015d44a6d https://www.encodeproject.org/files/ENCFF000YJZ/@@download/ENCFF000YJZ.bam hg19 archived mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF000YKA bigBed narrowPeak peaks ENCSR000EZV ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE ENCFF001VMR 243005 Sherman Weissman, Yale 9c29a4ee19065032579c1df6cd2e9cf1 https://www.encodeproject.org/files/ENCFF000YKA/@@download/ENCFF000YKA.bigBed hg19 archived mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF000YKB bigWig signal ENCSR000EZV ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 329267281 Sherman Weissman, Yale 06155fdfa8b7fc961053b3c12eca1919 https://www.encodeproject.org/files/ENCFF000YKB/@@download/ENCFF000YKB.bigWig hg19 archived mixed read lengths, control low read depth biological replicates with identical biosample, missing derived_from insufficient read length, insufficient read depth ENCFF000YKC bam alignments ENCSR000EZV ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 2 ENCFF000YPC 872376263 Sherman Weissman, Yale c120cf67e9c6ade387df85c3cf6e8423 https://www.encodeproject.org/files/ENCFF000YKC/@@download/ENCFF000YKC.bam hg19 archived mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF000YPA fastq reads ENCSR000EZV ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 1 1 27 single-ended 308688689 Sherman Weissman, Yale e0fee957ff9417da67da83b0e85ff92f https://www.encodeproject.org/files/ENCFF000YPA/@@download/ENCFF000YPA.fastq.gz Illumina Genome Analyzer /files/ENCFF000YPF/ released mixed read lengths, control low read depth, inconsistent control read length biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF000YPC fastq reads ENCSR000EZV ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 2 1 34 single-ended 702759299 Sherman Weissman, Yale f23015d997a2cadd0457219482dc4a2c https://www.encodeproject.org/files/ENCFF000YPC/@@download/ENCFF000YPC.fastq.gz Illumina Genome Analyzer /files/ENCFF000YPF/ released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF001VMR bed narrowPeak peaks ENCSR000EZV ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 80854 Sherman Weissman, Yale eac64e0aefa6def263bf52c0913fd11d https://www.encodeproject.org/files/ENCFF001VMR/@@download/ENCFF001VMR.bed.gz hg19 archived mixed read lengths, control low read depth biological replicates with identical biosample, missing derived_from insufficient read length, insufficient read depth ENCFF002CWE bed narrowPeak optimal idr thresholded peaks ENCSR000EZV ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 229866 ENCODE Consortium Analysis Working Group 621f5c78a485d7d2f5774a508d526313 https://www.encodeproject.org/files/ENCFF002CWE/@@download/ENCFF002CWE.bed.gz hg19 archived mixed read lengths, control low read depth biological replicates with identical biosample, missing derived_from insufficient read length, insufficient read depth ENCFF610TRS bigBed narrowPeak optimal idr thresholded peaks ENCSR000EZV ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE ENCFF002CWE 502670 ENCODE Consortium 6c217510b3e056e949bbcb4f44aecaa7 https://www.encodeproject.org/files/ENCFF610TRS/@@download/ENCFF610TRS.bigBed hg19 archived mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF268XFT bam unfiltered alignments ENCSR000EZV ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 1 27 ENCFF000YPA, ENCFF643CGH 406480041 ENCODE Processing Pipeline 2ff1b01b603a9eb8d28700d5865b7511 https://www.encodeproject.org/files/ENCFF268XFT/@@download/ENCFF268XFT.bam GRCh38 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF707BRW bam unfiltered alignments ENCSR000EZV ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 1 27 ENCFF000YPA, ENCFF807MUK 405648611 ENCODE Processing Pipeline b1effdccaa7c370d24073a622a4a3231 https://www.encodeproject.org/files/ENCFF707BRW/@@download/ENCFF707BRW.bam hg19 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF357MHM bam alignments ENCSR000EZV ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 1 27 ENCFF000YPA, ENCFF643CGH 269463976 ENCODE Processing Pipeline 570cbe501650f28205ab4a7e75ff2e6f https://www.encodeproject.org/files/ENCFF357MHM/@@download/ENCFF357MHM.bam GRCh38 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF834GPI bam alignments ENCSR000EZV ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 1 27 ENCFF000YPA, ENCFF807MUK 269802543 ENCODE Processing Pipeline e9315a43ef34040c0d6a2a320b997396 https://www.encodeproject.org/files/ENCFF834GPI/@@download/ENCFF834GPI.bam hg19 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF922YDR bam unfiltered alignments ENCSR000EZV ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 2 27 ENCFF000YPC, ENCFF643CGH 797515019 ENCODE Processing Pipeline c9e563b905ad8844b0753ef88609e2bf https://www.encodeproject.org/files/ENCFF922YDR/@@download/ENCFF922YDR.bam GRCh38 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF491EUN bam alignments ENCSR000EZV ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 2 27 ENCFF000YPC, ENCFF643CGH 347767392 ENCODE Processing Pipeline 775f18315c8f240746a81b5bccd33d15 https://www.encodeproject.org/files/ENCFF491EUN/@@download/ENCFF491EUN.bam GRCh38 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF642JBD bam unfiltered alignments ENCSR000EZV ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 2 27 ENCFF000YPC, ENCFF807MUK 794906491 ENCODE Processing Pipeline 4e6d5c7e2c1d4d5f3da0d15baa9463bb https://www.encodeproject.org/files/ENCFF642JBD/@@download/ENCFF642JBD.bam hg19 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF203FSU bam alignments ENCSR000EZV ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 2 27 ENCFF000YPC, ENCFF807MUK 348228954 ENCODE Processing Pipeline c2567e33c966d2221371a5914563bf2b https://www.encodeproject.org/files/ENCFF203FSU/@@download/ENCFF203FSU.bam hg19 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF830ZOZ bigWig signal p-value ENCSR000EZV ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 1 ENCFF834GPI, ENCFF998GMZ 244768194 ENCODE Processing Pipeline 3cc944a9248adbec7074b14616031788 https://www.encodeproject.org/files/ENCFF830ZOZ/@@download/ENCFF830ZOZ.bigWig hg19 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF595EQH bigWig signal p-value ENCSR000EZV ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 2 ENCFF203FSU, ENCFF998GMZ 284715487 ENCODE Processing Pipeline 11c50eeda42b118da54af8443392ca65 https://www.encodeproject.org/files/ENCFF595EQH/@@download/ENCFF595EQH.bigWig hg19 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF177OYJ bigWig signal p-value ENCSR000EZV ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF203FSU, ENCFF834GPI, ENCFF998GMZ 314064357 ENCODE Processing Pipeline fbaba2578b46e6f2428fa84b50cb8937 https://www.encodeproject.org/files/ENCFF177OYJ/@@download/ENCFF177OYJ.bigWig hg19 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF343ION bigWig signal p-value ENCSR000EZV ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 2 ENCFF332CUX, ENCFF491EUN 249740775 ENCODE Processing Pipeline 047559ea5529d78a83460636d6b23040 https://www.encodeproject.org/files/ENCFF343ION/@@download/ENCFF343ION.bigWig GRCh38 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF970TQC bigWig fold change over control ENCSR000EZV ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF203FSU, ENCFF834GPI, ENCFF998GMZ 268905335 ENCODE Processing Pipeline c132384af27a3a768dad22bc26deadb6 https://www.encodeproject.org/files/ENCFF970TQC/@@download/ENCFF970TQC.bigWig hg19 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF326MAA bigWig signal p-value ENCSR000EZV ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 1 ENCFF332CUX, ENCFF357MHM 269666334 ENCODE Processing Pipeline 51d31a55e6459f963c0558c41eaf3a9b https://www.encodeproject.org/files/ENCFF326MAA/@@download/ENCFF326MAA.bigWig GRCh38 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF167IGK bigWig signal p-value ENCSR000EZV ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF332CUX, ENCFF357MHM, ENCFF491EUN 314636107 ENCODE Processing Pipeline 93976e0aff14b45d76674d1533f14bd7 https://www.encodeproject.org/files/ENCFF167IGK/@@download/ENCFF167IGK.bigWig GRCh38 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF643AFV bigWig fold change over control ENCSR000EZV ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 1 ENCFF834GPI, ENCFF998GMZ 142606734 ENCODE Processing Pipeline e605db660496fea4875a0c7b3225a94b https://www.encodeproject.org/files/ENCFF643AFV/@@download/ENCFF643AFV.bigWig hg19 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF098OFQ bigWig fold change over control ENCSR000EZV ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 2 ENCFF203FSU, ENCFF998GMZ 160407580 ENCODE Processing Pipeline 475b720f2b4240fe4908cfce21069e39 https://www.encodeproject.org/files/ENCFF098OFQ/@@download/ENCFF098OFQ.bigWig hg19 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF423CXR bigWig fold change over control ENCSR000EZV ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 2 ENCFF332CUX, ENCFF491EUN 153718740 ENCODE Processing Pipeline 7e9c5f1dccbe8e2b48e32b782b9e253d https://www.encodeproject.org/files/ENCFF423CXR/@@download/ENCFF423CXR.bigWig GRCh38 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF089DYC bigWig fold change over control ENCSR000EZV ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 1 ENCFF332CUX, ENCFF357MHM 143861547 ENCODE Processing Pipeline 324ac9e729d16b70cf52a29612505d55 https://www.encodeproject.org/files/ENCFF089DYC/@@download/ENCFF089DYC.bigWig GRCh38 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF028OCG bed narrowPeak peaks ENCSR000EZV ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 1 ENCFF834GPI, ENCFF998GMZ 3212789 ENCODE Processing Pipeline ed9641efadb73b9a2d36f0187bb15fd8 https://www.encodeproject.org/files/ENCFF028OCG/@@download/ENCFF028OCG.bed.gz hg19 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF837BDB bed narrowPeak peaks ENCSR000EZV ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 2 ENCFF203FSU, ENCFF998GMZ 3858506 ENCODE Processing Pipeline 9daa2ed65158062bc55f643142b2d1bc https://www.encodeproject.org/files/ENCFF837BDB/@@download/ENCFF837BDB.bed.gz hg19 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF951BWR bed narrowPeak peaks ENCSR000EZV ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF203FSU, ENCFF834GPI, ENCFF998GMZ 5036397 ENCODE Processing Pipeline 55c27479c67c84b1bd80da3ed3f710d0 https://www.encodeproject.org/files/ENCFF951BWR/@@download/ENCFF951BWR.bed.gz hg19 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF431BNL bigBed narrowPeak peaks ENCSR000EZV ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 1 ENCFF028OCG 7033799 ENCODE Processing Pipeline 42ca55fe07c664ea7b1e2b7a9151fe13 https://www.encodeproject.org/files/ENCFF431BNL/@@download/ENCFF431BNL.bigBed hg19 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF699TIB bigBed narrowPeak peaks ENCSR000EZV ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 2 ENCFF837BDB 9090591 ENCODE Processing Pipeline c648b4b7b715f108faef3671904e4986 https://www.encodeproject.org/files/ENCFF699TIB/@@download/ENCFF699TIB.bigBed hg19 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF518ATL bigWig fold change over control ENCSR000EZV ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF332CUX, ENCFF357MHM, ENCFF491EUN 270730016 ENCODE Processing Pipeline 8ee5564f175c44edf35a160c43a8d06c https://www.encodeproject.org/files/ENCFF518ATL/@@download/ENCFF518ATL.bigWig GRCh38 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF373XQT bigBed narrowPeak peaks ENCSR000EZV ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF951BWR 10761734 ENCODE Processing Pipeline f698d04b9dad85e5950ba026b58a9db9 https://www.encodeproject.org/files/ENCFF373XQT/@@download/ENCFF373XQT.bigBed hg19 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF623EST bed narrowPeak conservative idr thresholded peaks ENCSR000EZV ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF001TDO, ENCFF028OCG, ENCFF837BDB, ENCFF951BWR 188455 ENCODE Processing Pipeline 1d4b58167f41b3310c71282b71aa46f4 https://www.encodeproject.org/files/ENCFF623EST/@@download/ENCFF623EST.bed.gz hg19 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF248HIX bed narrowPeak peaks ENCSR000EZV ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF332CUX, ENCFF357MHM, ENCFF491EUN 5025965 ENCODE Processing Pipeline 0d0814783a85a290d472d57def0d2436 https://www.encodeproject.org/files/ENCFF248HIX/@@download/ENCFF248HIX.bed.gz GRCh38 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF004AAQ bigBed narrowPeak conservative idr thresholded peaks ENCSR000EZV ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF623EST 370180 ENCODE Processing Pipeline 1f5f6e5c60252691ff8fe6c429399ea1 https://www.encodeproject.org/files/ENCFF004AAQ/@@download/ENCFF004AAQ.bigBed hg19 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF353EUL bed narrowPeak peaks ENCSR000EZV ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 2 ENCFF332CUX, ENCFF491EUN 3760623 ENCODE Processing Pipeline bff80b3a99f1509fa4da5df2fb0ab5a4 https://www.encodeproject.org/files/ENCFF353EUL/@@download/ENCFF353EUL.bed.gz GRCh38 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF243XZA bed narrowPeak peaks ENCSR000EZV ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 1 ENCFF332CUX, ENCFF357MHM 3245727 ENCODE Processing Pipeline 68f8566686dcaf7ecb35b1020c39101c https://www.encodeproject.org/files/ENCFF243XZA/@@download/ENCFF243XZA.bed.gz GRCh38 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF387LTN bed narrowPeak optimal idr thresholded peaks ENCSR000EZV ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF001TDO, ENCFF028OCG, ENCFF837BDB, ENCFF951BWR 214182 ENCODE Processing Pipeline 7f880cffb36b0f56b3b62739e6b4b1b4 https://www.encodeproject.org/files/ENCFF387LTN/@@download/ENCFF387LTN.bed.gz hg19 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF768ALO bigBed narrowPeak optimal idr thresholded peaks ENCSR000EZV ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF387LTN 406827 ENCODE Processing Pipeline 0aeecfcc5580e7fa85e0caebb44a3bd8 https://www.encodeproject.org/files/ENCFF768ALO/@@download/ENCFF768ALO.bigBed hg19 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF364QQQ bigBed narrowPeak peaks ENCSR000EZV ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 1 ENCFF243XZA 7074597 ENCODE Processing Pipeline 109c55880aa318d6d2e72203b9d9054b https://www.encodeproject.org/files/ENCFF364QQQ/@@download/ENCFF364QQQ.bigBed GRCh38 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF796XZC bigBed narrowPeak peaks ENCSR000EZV ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 2 ENCFF353EUL 8993199 ENCODE Processing Pipeline bdf217614facc0bca93376d603ea8843 https://www.encodeproject.org/files/ENCFF796XZC/@@download/ENCFF796XZC.bigBed GRCh38 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF310ZOF bigBed narrowPeak peaks ENCSR000EZV ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF248HIX 10756782 ENCODE Processing Pipeline 041ae504c3a35cc0b9b0487957669b88 https://www.encodeproject.org/files/ENCFF310ZOF/@@download/ENCFF310ZOF.bigBed GRCh38 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF120IMP bed narrowPeak conservative idr thresholded peaks ENCSR000EZV ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF243XZA, ENCFF248HIX, ENCFF353EUL, ENCFF419RSJ 187993 ENCODE Processing Pipeline 8fb1589bebc85e1feca2ade17dc30c5e https://www.encodeproject.org/files/ENCFF120IMP/@@download/ENCFF120IMP.bed.gz GRCh38 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF339AQP bed narrowPeak optimal idr thresholded peaks ENCSR000EZV ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF243XZA, ENCFF248HIX, ENCFF353EUL, ENCFF419RSJ 213482 ENCODE Processing Pipeline 07ed17fb6c01e4e0b15d825fe992e974 https://www.encodeproject.org/files/ENCFF339AQP/@@download/ENCFF339AQP.bed.gz GRCh38 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF730YLS bigBed narrowPeak conservative idr thresholded peaks ENCSR000EZV ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF120IMP 369479 ENCODE Processing Pipeline bac7985c701a357bd37b659eb3b152eb https://www.encodeproject.org/files/ENCFF730YLS/@@download/ENCFF730YLS.bigBed GRCh38 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF460TID bigBed narrowPeak optimal idr thresholded peaks ENCSR000EZV ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF339AQP 405482 ENCODE Processing Pipeline 665842b5a1ccf0c7f8ec71edf1cdac03 https://www.encodeproject.org/files/ENCFF460TID/@@download/ENCFF460TID.bigBed GRCh38 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF196AKS fastq reads ENCSR512NLO ChIP-seq EFO:0002067 K562 cell line Homo sapiens MNT-human ENCAB000BCL DNA False 2017-05-17 ENCODE 1 1 100 paired-ended 2 ENCFF642JVD 2366717319 Michael Snyder, Stanford 54e7abff3c709ee175db3f4e28533ba0 SRA:SRR6213505 https://www.encodeproject.org/files/ENCFF196AKS/@@download/ENCFF196AKS.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFH/ released low read depth, mild to moderate bottlenecking ENCFF642JVD fastq reads ENCSR512NLO ChIP-seq EFO:0002067 K562 cell line Homo sapiens MNT-human ENCAB000BCL DNA False 2017-05-17 ENCODE 1 1 100 paired-ended 1 ENCFF196AKS 2307039498 Michael Snyder, Stanford 7ef09d5e703be9491a26fdb8d133cdf1 SRA:SRR6213505 https://www.encodeproject.org/files/ENCFF642JVD/@@download/ENCFF642JVD.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFF/ released low read depth, mild to moderate bottlenecking ENCFF244ECJ fastq reads ENCSR512NLO ChIP-seq EFO:0002067 K562 cell line Homo sapiens MNT-human ENCAB000BCL DNA False 2017-05-17 ENCODE 2 1 100 paired-ended 1 ENCFF335ZAN 2051365074 Michael Snyder, Stanford 0aa1e519b4dd93b3f7eb094b9b65db2e SRA:SRR6213504 https://www.encodeproject.org/files/ENCFF244ECJ/@@download/ENCFF244ECJ.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFD/ released low read depth, mild to moderate bottlenecking ENCFF335ZAN fastq reads ENCSR512NLO ChIP-seq EFO:0002067 K562 cell line Homo sapiens MNT-human ENCAB000BCL DNA False 2017-05-17 ENCODE 2 1 100 paired-ended 2 ENCFF244ECJ 2075407140 Michael Snyder, Stanford 5daa8e7048a132b183c2c8e250296c73 SRA:SRR6213504 https://www.encodeproject.org/files/ENCFF335ZAN/@@download/ENCFF335ZAN.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFA/ released low read depth, mild to moderate bottlenecking ENCFF873IPB bam unfiltered alignments ENCSR512NLO ChIP-seq EFO:0002067 K562 cell line Homo sapiens MNT-human ENCAB000BCL DNA False 2017-05-17 ENCODE 2 100 ENCFF244ECJ, ENCFF335ZAN, ENCFF807MUK 4363289378 ENCODE Processing Pipeline 9f3f75e39b7025164245685a0c3ef36b https://www.encodeproject.org/files/ENCFF873IPB/@@download/ENCFF873IPB.bam hg19 released low read depth, mild to moderate bottlenecking ENCFF750PMI bam alignments ENCSR512NLO ChIP-seq EFO:0002067 K562 cell line Homo sapiens MNT-human ENCAB000BCL DNA False 2017-05-17 ENCODE 2 100 ENCFF244ECJ, ENCFF335ZAN, ENCFF807MUK 3310221844 ENCODE Processing Pipeline f48ee944d1bec217c4b4e04a202246e4 https://www.encodeproject.org/files/ENCFF750PMI/@@download/ENCFF750PMI.bam hg19 released low read depth, mild to moderate bottlenecking ENCFF510XHR bam alignments ENCSR512NLO ChIP-seq EFO:0002067 K562 cell line Homo sapiens MNT-human ENCAB000BCL DNA False 2017-05-17 ENCODE 1 100 ENCFF196AKS, ENCFF642JVD, ENCFF807MUK 3967412478 ENCODE Processing Pipeline bcfab615b550faa4733ab5cbf79768d4 https://www.encodeproject.org/files/ENCFF510XHR/@@download/ENCFF510XHR.bam hg19 released low read depth, mild to moderate bottlenecking ENCFF151UKE bam unfiltered alignments ENCSR512NLO ChIP-seq EFO:0002067 K562 cell line Homo sapiens MNT-human ENCAB000BCL DNA False 2017-05-17 ENCODE 1 100 ENCFF196AKS, ENCFF642JVD, ENCFF807MUK 4972218571 ENCODE Processing Pipeline 0b657af3cad60ba32e79a0dcfc2eb838 https://www.encodeproject.org/files/ENCFF151UKE/@@download/ENCFF151UKE.bam hg19 released low read depth, mild to moderate bottlenecking ENCFF153SPR bam unfiltered alignments ENCSR512NLO ChIP-seq EFO:0002067 K562 cell line Homo sapiens MNT-human ENCAB000BCL DNA False 2017-05-17 ENCODE 2 100 ENCFF244ECJ, ENCFF335ZAN, ENCFF643CGH 4365933073 ENCODE Processing Pipeline fa49821bc45456edcac251b672c905c1 https://www.encodeproject.org/files/ENCFF153SPR/@@download/ENCFF153SPR.bam GRCh38 released low read depth, mild to moderate bottlenecking ENCFF767FRB bam alignments ENCSR512NLO ChIP-seq EFO:0002067 K562 cell line Homo sapiens MNT-human ENCAB000BCL DNA False 2017-05-17 ENCODE 2 100 ENCFF244ECJ, ENCFF335ZAN, ENCFF643CGH 3312163555 ENCODE Processing Pipeline 650dd39d4bbd92eced1f9ddc310a16c6 https://www.encodeproject.org/files/ENCFF767FRB/@@download/ENCFF767FRB.bam GRCh38 released low read depth, mild to moderate bottlenecking ENCFF921KHT bam unfiltered alignments ENCSR512NLO ChIP-seq EFO:0002067 K562 cell line Homo sapiens MNT-human ENCAB000BCL DNA False 2017-05-17 ENCODE 1 100 ENCFF196AKS, ENCFF642JVD, ENCFF643CGH 4975521263 ENCODE Processing Pipeline 4c359d6c93ca947fb2377f1f3c864786 https://www.encodeproject.org/files/ENCFF921KHT/@@download/ENCFF921KHT.bam GRCh38 released low read depth, mild to moderate bottlenecking ENCFF911BGV bam alignments ENCSR512NLO ChIP-seq EFO:0002067 K562 cell line Homo sapiens MNT-human ENCAB000BCL DNA False 2017-05-17 ENCODE 1 100 ENCFF196AKS, ENCFF642JVD, ENCFF643CGH 3969987169 ENCODE Processing Pipeline c9ac0375d8ae4c525f2fbc03fd86d5b5 https://www.encodeproject.org/files/ENCFF911BGV/@@download/ENCFF911BGV.bam GRCh38 released low read depth, mild to moderate bottlenecking ENCFF530GIY bed narrowPeak peaks ENCSR512NLO ChIP-seq EFO:0002067 K562 cell line Homo sapiens MNT-human ENCAB000BCL DNA False 2017-05-17 ENCODE 2 ENCFF227IZS, ENCFF767FRB 6777709 ENCODE Processing Pipeline e2874ffe928f5e3b2b2158e2d9ac76dc https://www.encodeproject.org/files/ENCFF530GIY/@@download/ENCFF530GIY.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking ENCFF915WKM bigWig signal p-value ENCSR512NLO ChIP-seq EFO:0002067 K562 cell line Homo sapiens MNT-human ENCAB000BCL DNA False 2017-05-17 ENCODE 1, 2 ENCFF227IZS, ENCFF767FRB, ENCFF910IKB, ENCFF911BGV 1914831901 ENCODE Processing Pipeline 1b52088cf1d8288ea7c8253b19f0a527 https://www.encodeproject.org/files/ENCFF915WKM/@@download/ENCFF915WKM.bigWig GRCh38 released low read depth, mild to moderate bottlenecking ENCFF204QHB bigWig fold change over control ENCSR512NLO ChIP-seq EFO:0002067 K562 cell line Homo sapiens MNT-human ENCAB000BCL DNA False 2017-05-17 ENCODE 2 ENCFF227IZS, ENCFF767FRB 1022386755 ENCODE Processing Pipeline 67eebac1a0ca1bbaa79e2d74a2164afa https://www.encodeproject.org/files/ENCFF204QHB/@@download/ENCFF204QHB.bigWig GRCh38 released low read depth, mild to moderate bottlenecking ENCFF573PGT bigWig signal p-value ENCSR512NLO ChIP-seq EFO:0002067 K562 cell line Homo sapiens MNT-human ENCAB000BCL DNA False 2017-05-17 ENCODE 2 ENCFF227IZS, ENCFF767FRB 1071214853 ENCODE Processing Pipeline 819f4f7a2da47329f3fd359515baa0e8 https://www.encodeproject.org/files/ENCFF573PGT/@@download/ENCFF573PGT.bigWig GRCh38 released low read depth, mild to moderate bottlenecking ENCFF950ILH bed narrowPeak peaks ENCSR512NLO ChIP-seq EFO:0002067 K562 cell line Homo sapiens MNT-human ENCAB000BCL DNA False 2017-05-17 ENCODE 1 ENCFF910IKB, ENCFF911BGV 6946386 ENCODE Processing Pipeline 8483d127513c4118063faf467a9fbb82 https://www.encodeproject.org/files/ENCFF950ILH/@@download/ENCFF950ILH.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking ENCFF062XSA bigBed narrowPeak peaks ENCSR512NLO ChIP-seq EFO:0002067 K562 cell line Homo sapiens MNT-human ENCAB000BCL DNA False 2017-05-17 ENCODE 1, 2 ENCFF521EAO 13008450 ENCODE Processing Pipeline ce930e52c42042a385b53c0073e8163e https://www.encodeproject.org/files/ENCFF062XSA/@@download/ENCFF062XSA.bigBed GRCh38 released low read depth, mild to moderate bottlenecking ENCFF391ISV bigBed narrowPeak conservative idr thresholded peaks ENCSR512NLO ChIP-seq EFO:0002067 K562 cell line Homo sapiens MNT-human ENCAB000BCL DNA False 2017-05-17 ENCODE 1, 2 ENCFF119EPK 1137292 ENCODE Processing Pipeline 47953f3757996a8c83b91233c671f440 https://www.encodeproject.org/files/ENCFF391ISV/@@download/ENCFF391ISV.bigBed GRCh38 released low read depth, mild to moderate bottlenecking ENCFF459DYU bed narrowPeak optimal idr thresholded peaks ENCSR512NLO ChIP-seq EFO:0002067 K562 cell line Homo sapiens MNT-human ENCAB000BCL DNA False 2017-05-17 ENCODE 1, 2 ENCFF419RSJ, ENCFF521EAO, ENCFF530GIY, ENCFF950ILH 576447 ENCODE Processing Pipeline 624fb737709c3ddaa02467eac3bc9eba https://www.encodeproject.org/files/ENCFF459DYU/@@download/ENCFF459DYU.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking ENCFF148KYP bigBed narrowPeak optimal idr thresholded peaks ENCSR512NLO ChIP-seq EFO:0002067 K562 cell line Homo sapiens MNT-human ENCAB000BCL DNA False 2017-05-17 ENCODE 1, 2 ENCFF459DYU 1314400 ENCODE Processing Pipeline 0199d77c4cbf829aa015df6cc3d83715 https://www.encodeproject.org/files/ENCFF148KYP/@@download/ENCFF148KYP.bigBed GRCh38 released low read depth, mild to moderate bottlenecking ENCFF773ZED bigWig signal p-value ENCSR512NLO ChIP-seq EFO:0002067 K562 cell line Homo sapiens MNT-human ENCAB000BCL DNA False 2017-05-17 ENCODE 1 ENCFF910IKB, ENCFF911BGV 1105103569 ENCODE Processing Pipeline 50c8640a7c5a2659b0a556bd42c73d30 https://www.encodeproject.org/files/ENCFF773ZED/@@download/ENCFF773ZED.bigWig GRCh38 released low read depth, mild to moderate bottlenecking ENCFF875WUL bigWig fold change over control ENCSR512NLO ChIP-seq EFO:0002067 K562 cell line Homo sapiens MNT-human ENCAB000BCL DNA False 2017-05-17 ENCODE 1 ENCFF910IKB, ENCFF911BGV 1150503286 ENCODE Processing Pipeline 5491da362ee890bd187a8a692389e59e https://www.encodeproject.org/files/ENCFF875WUL/@@download/ENCFF875WUL.bigWig GRCh38 released low read depth, mild to moderate bottlenecking ENCFF521EAO bed narrowPeak peaks ENCSR512NLO ChIP-seq EFO:0002067 K562 cell line Homo sapiens MNT-human ENCAB000BCL DNA False 2017-05-17 ENCODE 1, 2 ENCFF227IZS, ENCFF767FRB, ENCFF910IKB, ENCFF911BGV 7247401 ENCODE Processing Pipeline a2291ca818def310256efcbd7aa7333f https://www.encodeproject.org/files/ENCFF521EAO/@@download/ENCFF521EAO.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking ENCFF024WNL bigBed narrowPeak peaks ENCSR512NLO ChIP-seq EFO:0002067 K562 cell line Homo sapiens MNT-human ENCAB000BCL DNA False 2017-05-17 ENCODE 2 ENCFF530GIY 13251497 ENCODE Processing Pipeline 5fd23f0b44f2a7412173d2cd04087606 https://www.encodeproject.org/files/ENCFF024WNL/@@download/ENCFF024WNL.bigBed GRCh38 released low read depth, mild to moderate bottlenecking ENCFF605PQC bigWig fold change over control ENCSR512NLO ChIP-seq EFO:0002067 K562 cell line Homo sapiens MNT-human ENCAB000BCL DNA False 2017-05-17 ENCODE 1, 2 ENCFF227IZS, ENCFF767FRB, ENCFF910IKB, ENCFF911BGV 2024546083 ENCODE Processing Pipeline 5a36eaa793522c2a59153cdd88802f61 https://www.encodeproject.org/files/ENCFF605PQC/@@download/ENCFF605PQC.bigWig GRCh38 released low read depth, mild to moderate bottlenecking ENCFF524HBS bigBed narrowPeak peaks ENCSR512NLO ChIP-seq EFO:0002067 K562 cell line Homo sapiens MNT-human ENCAB000BCL DNA False 2017-05-17 ENCODE 1 ENCFF950ILH 13120174 ENCODE Processing Pipeline 4ff572b453e348b5abdc8f7926efafb6 https://www.encodeproject.org/files/ENCFF524HBS/@@download/ENCFF524HBS.bigBed GRCh38 released low read depth, mild to moderate bottlenecking ENCFF119EPK bed narrowPeak conservative idr thresholded peaks ENCSR512NLO ChIP-seq EFO:0002067 K562 cell line Homo sapiens MNT-human ENCAB000BCL DNA False 2017-05-17 ENCODE 1, 2 ENCFF419RSJ, ENCFF521EAO, ENCFF530GIY, ENCFF950ILH 480583 ENCODE Processing Pipeline 2cb97f1ef2af870da2442d5764851277 https://www.encodeproject.org/files/ENCFF119EPK/@@download/ENCFF119EPK.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking ENCFF799NMK bed narrowPeak peaks ENCSR512NLO ChIP-seq EFO:0002067 K562 cell line Homo sapiens MNT-human ENCAB000BCL DNA False 2017-05-17 ENCODE 2 ENCFF051LWI, ENCFF750PMI 6794130 ENCODE Processing Pipeline dc1143c5fb672ca9b5a0bf818538506d https://www.encodeproject.org/files/ENCFF799NMK/@@download/ENCFF799NMK.bed.gz hg19 released low read depth, mild to moderate bottlenecking ENCFF228QNJ bed narrowPeak conservative idr thresholded peaks ENCSR512NLO ChIP-seq EFO:0002067 K562 cell line Homo sapiens MNT-human ENCAB000BCL DNA False 2017-05-17 ENCODE 1, 2 ENCFF001TDO, ENCFF595GHN, ENCFF799NMK, ENCFF846YPA 450613 ENCODE Processing Pipeline cf77539f2a46edb31c4d4c3bc64756e7 https://www.encodeproject.org/files/ENCFF228QNJ/@@download/ENCFF228QNJ.bed.gz hg19 released low read depth, mild to moderate bottlenecking ENCFF180ZLS bigWig signal p-value ENCSR512NLO ChIP-seq EFO:0002067 K562 cell line Homo sapiens MNT-human ENCAB000BCL DNA False 2017-05-17 ENCODE 2 ENCFF051LWI, ENCFF750PMI 899062172 ENCODE Processing Pipeline a98c0f9bf169266f1604992b8b6a98e9 https://www.encodeproject.org/files/ENCFF180ZLS/@@download/ENCFF180ZLS.bigWig hg19 released low read depth, mild to moderate bottlenecking ENCFF676IIA bigWig signal p-value ENCSR512NLO ChIP-seq EFO:0002067 K562 cell line Homo sapiens MNT-human ENCAB000BCL DNA False 2017-05-17 ENCODE 1, 2 ENCFF051LWI, ENCFF510XHR, ENCFF581ZJL, ENCFF750PMI 1687833583 ENCODE Processing Pipeline 8eaa0bafa8ac8da2ea4e80575e3f73d5 https://www.encodeproject.org/files/ENCFF676IIA/@@download/ENCFF676IIA.bigWig hg19 released low read depth, mild to moderate bottlenecking ENCFF447BZB bigBed narrowPeak peaks ENCSR512NLO ChIP-seq EFO:0002067 K562 cell line Homo sapiens MNT-human ENCAB000BCL DNA False 2017-05-17 ENCODE 2 ENCFF799NMK 13257062 ENCODE Processing Pipeline dcdf9bc23e2ec672bbc5391477fc02f7 https://www.encodeproject.org/files/ENCFF447BZB/@@download/ENCFF447BZB.bigBed hg19 released low read depth, mild to moderate bottlenecking ENCFF595GHN bed narrowPeak peaks ENCSR512NLO ChIP-seq EFO:0002067 K562 cell line Homo sapiens MNT-human ENCAB000BCL DNA False 2017-05-17 ENCODE 1, 2 ENCFF051LWI, ENCFF510XHR, ENCFF581ZJL, ENCFF750PMI 7151498 ENCODE Processing Pipeline e099eb679c86628154d85fb234b9c010 https://www.encodeproject.org/files/ENCFF595GHN/@@download/ENCFF595GHN.bed.gz hg19 released low read depth, mild to moderate bottlenecking ENCFF704NZX bigBed narrowPeak peaks ENCSR512NLO ChIP-seq EFO:0002067 K562 cell line Homo sapiens MNT-human ENCAB000BCL DNA False 2017-05-17 ENCODE 1 ENCFF846YPA 13132854 ENCODE Processing Pipeline a6ce60ae9622ee62575c90069f460d31 https://www.encodeproject.org/files/ENCFF704NZX/@@download/ENCFF704NZX.bigBed hg19 released low read depth, mild to moderate bottlenecking ENCFF645QZR bigBed narrowPeak peaks ENCSR512NLO ChIP-seq EFO:0002067 K562 cell line Homo sapiens MNT-human ENCAB000BCL DNA False 2017-05-17 ENCODE 1, 2 ENCFF595GHN 12885850 ENCODE Processing Pipeline 26daed0704bf0f332b9ef2d85d765c13 https://www.encodeproject.org/files/ENCFF645QZR/@@download/ENCFF645QZR.bigBed hg19 released low read depth, mild to moderate bottlenecking ENCFF482MZQ bigWig signal p-value ENCSR512NLO ChIP-seq EFO:0002067 K562 cell line Homo sapiens MNT-human ENCAB000BCL DNA False 2017-05-17 ENCODE 1 ENCFF510XHR, ENCFF581ZJL 1062616617 ENCODE Processing Pipeline 4c3625f7f26fc841112f1013b04df843 https://www.encodeproject.org/files/ENCFF482MZQ/@@download/ENCFF482MZQ.bigWig hg19 released low read depth, mild to moderate bottlenecking ENCFF323BFO bigWig fold change over control ENCSR512NLO ChIP-seq EFO:0002067 K562 cell line Homo sapiens MNT-human ENCAB000BCL DNA False 2017-05-17 ENCODE 1 ENCFF510XHR, ENCFF581ZJL 1149402351 ENCODE Processing Pipeline a22b73be8a19c564b9959038101c085a https://www.encodeproject.org/files/ENCFF323BFO/@@download/ENCFF323BFO.bigWig hg19 released low read depth, mild to moderate bottlenecking ENCFF025YMU bigWig fold change over control ENCSR512NLO ChIP-seq EFO:0002067 K562 cell line Homo sapiens MNT-human ENCAB000BCL DNA False 2017-05-17 ENCODE 2 ENCFF051LWI, ENCFF750PMI 1023155941 ENCODE Processing Pipeline 7f130b9e9751d28ee7784756843fb41f https://www.encodeproject.org/files/ENCFF025YMU/@@download/ENCFF025YMU.bigWig hg19 released low read depth, mild to moderate bottlenecking ENCFF757IZU bigWig fold change over control ENCSR512NLO ChIP-seq EFO:0002067 K562 cell line Homo sapiens MNT-human ENCAB000BCL DNA False 2017-05-17 ENCODE 1, 2 ENCFF051LWI, ENCFF510XHR, ENCFF581ZJL, ENCFF750PMI 2022513072 ENCODE Processing Pipeline fdaed1c825bbe74960d8abfbf62b6a99 https://www.encodeproject.org/files/ENCFF757IZU/@@download/ENCFF757IZU.bigWig hg19 released low read depth, mild to moderate bottlenecking ENCFF846YPA bed narrowPeak peaks ENCSR512NLO ChIP-seq EFO:0002067 K562 cell line Homo sapiens MNT-human ENCAB000BCL DNA False 2017-05-17 ENCODE 1 ENCFF510XHR, ENCFF581ZJL 6969714 ENCODE Processing Pipeline 62e5ebddd24974b5d6e8e6dbb6cc0480 https://www.encodeproject.org/files/ENCFF846YPA/@@download/ENCFF846YPA.bed.gz hg19 released low read depth, mild to moderate bottlenecking ENCFF567GSX bed narrowPeak optimal idr thresholded peaks ENCSR512NLO ChIP-seq EFO:0002067 K562 cell line Homo sapiens MNT-human ENCAB000BCL DNA False 2017-05-17 ENCODE 1, 2 ENCFF001TDO, ENCFF595GHN, ENCFF799NMK, ENCFF846YPA 542551 ENCODE Processing Pipeline dade819d689c4ea2e878e83004ee4f3b https://www.encodeproject.org/files/ENCFF567GSX/@@download/ENCFF567GSX.bed.gz hg19 released low read depth, mild to moderate bottlenecking ENCFF852NNM bigBed narrowPeak conservative idr thresholded peaks ENCSR512NLO ChIP-seq EFO:0002067 K562 cell line Homo sapiens MNT-human ENCAB000BCL DNA False 2017-05-17 ENCODE 1, 2 ENCFF228QNJ 885810 ENCODE Processing Pipeline a12fdd9971b7c2e0e2ec719a10cc4d1d https://www.encodeproject.org/files/ENCFF852NNM/@@download/ENCFF852NNM.bigBed hg19 released low read depth, mild to moderate bottlenecking ENCFF261QRX bigBed narrowPeak optimal idr thresholded peaks ENCSR512NLO ChIP-seq EFO:0002067 K562 cell line Homo sapiens MNT-human ENCAB000BCL DNA False 2017-05-17 ENCODE 1, 2 ENCFF567GSX 1023838 ENCODE Processing Pipeline dd9fcc41034fed57261cb3364ce72016 https://www.encodeproject.org/files/ENCFF261QRX/@@download/ENCFF261QRX.bigBed hg19 released low read depth, mild to moderate bottlenecking ENCFF459BFW bam unfiltered alignments ENCSR657EOF ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFRKB-human ENCAB097XCT DNA False 2016-06-14 ENCODE 2 100 ENCFF340VHI, ENCFF710XSY, ENCFF807MUK 2687617010 ENCODE Processing Pipeline 6c29a8578d66814e0bbaa2425f74fb8a https://www.encodeproject.org/files/ENCFF459BFW/@@download/ENCFF459BFW.bam hg19 released low read depth missing control alignments ENCFF222SHU bam unfiltered alignments ENCSR657EOF ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFRKB-human ENCAB097XCT DNA False 2016-06-14 ENCODE 1 100 ENCFF139VNK, ENCFF705WPL, ENCFF807MUK 3216907793 ENCODE Processing Pipeline 9c97cc249627100e57054be71debef60 https://www.encodeproject.org/files/ENCFF222SHU/@@download/ENCFF222SHU.bam hg19 released low read depth missing control alignments ENCFF340VHI fastq reads ENCSR657EOF ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFRKB-human ENCAB097XCT DNA False 2016-06-14 ENCODE 2 1 100 paired-ended 1 ENCFF710XSY 1172560713 Michael Snyder, Stanford 7ecc7b161ef03a6d7c498a65ee04133b SRA:SRR5111926 https://www.encodeproject.org/files/ENCFF340VHI/@@download/ENCFF340VHI.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFD/ released low read depth missing control alignments ENCFF710XSY fastq reads ENCSR657EOF ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFRKB-human ENCAB097XCT DNA False 2016-06-14 ENCODE 2 1 100 paired-ended 2 ENCFF340VHI 1209175070 Michael Snyder, Stanford 4a10100abec7690d7503b80129cd084d SRA:SRR5111926 https://www.encodeproject.org/files/ENCFF710XSY/@@download/ENCFF710XSY.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFA/ released low read depth missing control alignments ENCFF139VNK fastq reads ENCSR657EOF ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFRKB-human ENCAB097XCT DNA False 2016-06-14 ENCODE 1 1 100 paired-ended 2 ENCFF705WPL 1454870537 Michael Snyder, Stanford 4503c514a64699e39937041970e137c0 SRA:SRR5111927 https://www.encodeproject.org/files/ENCFF139VNK/@@download/ENCFF139VNK.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFH/ released low read depth missing control alignments ENCFF705WPL fastq reads ENCSR657EOF ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFRKB-human ENCAB097XCT DNA False 2016-06-14 ENCODE 1 1 100 paired-ended 1 ENCFF139VNK 1422221497 Michael Snyder, Stanford 5102dadb8baa706793dd4805f7bd0457 SRA:SRR5111927 https://www.encodeproject.org/files/ENCFF705WPL/@@download/ENCFF705WPL.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFF/ released low read depth missing control alignments ENCFF943WPZ bam alignments ENCSR657EOF ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFRKB-human ENCAB097XCT DNA False 2016-06-14 ENCODE 2 100 ENCFF340VHI, ENCFF710XSY, ENCFF807MUK 2327103816 ENCODE Processing Pipeline 987702e26b88ff990d70f259f2ffcd23 https://www.encodeproject.org/files/ENCFF943WPZ/@@download/ENCFF943WPZ.bam hg19 released low read depth missing control alignments ENCFF239DXH bam alignments ENCSR657EOF ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFRKB-human ENCAB097XCT DNA False 2016-06-14 ENCODE 1 100 ENCFF139VNK, ENCFF705WPL, ENCFF807MUK 2737771975 ENCODE Processing Pipeline 7e9b3237d0d92cb271978403b753a0ca https://www.encodeproject.org/files/ENCFF239DXH/@@download/ENCFF239DXH.bam hg19 released low read depth missing control alignments ENCFF300PWL bigWig signal p-value ENCSR657EOF ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFRKB-human ENCAB097XCT DNA False 2016-06-14 ENCODE 1 ENCFF239DXH, ENCFF581ZJL 1014291836 ENCODE Processing Pipeline 164768b2d1353493bd2a51bd3c873fa8 https://www.encodeproject.org/files/ENCFF300PWL/@@download/ENCFF300PWL.bigWig hg19 released low read depth missing control alignments ENCFF086OSM bigWig signal p-value ENCSR657EOF ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFRKB-human ENCAB097XCT DNA False 2016-06-14 ENCODE 2 ENCFF051LWI, ENCFF943WPZ 837163985 ENCODE Processing Pipeline 1cd140ffa8697ec15a378fc302fe2f9b https://www.encodeproject.org/files/ENCFF086OSM/@@download/ENCFF086OSM.bigWig hg19 released low read depth missing control alignments ENCFF210WIF bigWig signal p-value ENCSR657EOF ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFRKB-human ENCAB097XCT DNA False 2016-06-14 ENCODE 1, 2 ENCFF051LWI, ENCFF239DXH, ENCFF581ZJL, ENCFF943WPZ 1634658567 ENCODE Processing Pipeline 7ddf453f4c654c2a660efe44a7de6242 https://www.encodeproject.org/files/ENCFF210WIF/@@download/ENCFF210WIF.bigWig hg19 released low read depth missing control alignments ENCFF066GLS bigWig fold change over control ENCSR657EOF ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFRKB-human ENCAB097XCT DNA False 2016-06-14 ENCODE 1 ENCFF239DXH, ENCFF581ZJL 921467069 ENCODE Processing Pipeline 73ad6dcb0c7b8ba8cf606491564732d2 https://www.encodeproject.org/files/ENCFF066GLS/@@download/ENCFF066GLS.bigWig hg19 released low read depth missing control alignments ENCFF938CSV bigWig fold change over control ENCSR657EOF ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFRKB-human ENCAB097XCT DNA False 2016-06-14 ENCODE 2 ENCFF051LWI, ENCFF943WPZ 814057051 ENCODE Processing Pipeline 6b5e48f3780a7f88f83843ddec452e5e https://www.encodeproject.org/files/ENCFF938CSV/@@download/ENCFF938CSV.bigWig hg19 released low read depth missing control alignments ENCFF231QPU bigWig fold change over control ENCSR657EOF ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFRKB-human ENCAB097XCT DNA False 2016-06-14 ENCODE 1, 2 ENCFF051LWI, ENCFF239DXH, ENCFF581ZJL, ENCFF943WPZ 1761370773 ENCODE Processing Pipeline 8ae21eb6660e4255ec5adc2c275105b2 https://www.encodeproject.org/files/ENCFF231QPU/@@download/ENCFF231QPU.bigWig hg19 released low read depth missing control alignments ENCFF674FOQ bed narrowPeak peaks ENCSR657EOF ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFRKB-human ENCAB097XCT DNA False 2016-06-14 ENCODE 1 ENCFF239DXH, ENCFF581ZJL 6613524 ENCODE Processing Pipeline 68b5c4aee6f13205eba0cc76e6b34593 https://www.encodeproject.org/files/ENCFF674FOQ/@@download/ENCFF674FOQ.bed.gz hg19 released low read depth missing control alignments ENCFF235FNK bed narrowPeak peaks ENCSR657EOF ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFRKB-human ENCAB097XCT DNA False 2016-06-14 ENCODE 1, 2 ENCFF051LWI, ENCFF239DXH, ENCFF581ZJL, ENCFF943WPZ 7244029 ENCODE Processing Pipeline 9badfc32837ff8bfaac8d89424f31cba https://www.encodeproject.org/files/ENCFF235FNK/@@download/ENCFF235FNK.bed.gz hg19 released low read depth missing control alignments ENCFF328OKA bigBed narrowPeak peaks ENCSR657EOF ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFRKB-human ENCAB097XCT DNA False 2016-06-14 ENCODE 1 ENCFF674FOQ 13205291 ENCODE Processing Pipeline 43dcaf1cb74309d6b48d6e6bb40ce2de https://www.encodeproject.org/files/ENCFF328OKA/@@download/ENCFF328OKA.bigBed hg19 released low read depth missing control alignments ENCFF874QPZ bigBed narrowPeak peaks ENCSR657EOF ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFRKB-human ENCAB097XCT DNA False 2016-06-14 ENCODE 2 ENCFF338NAH 13174495 ENCODE Processing Pipeline 94a5b3303783bcdd1f87fce3f4b7e0b4 https://www.encodeproject.org/files/ENCFF874QPZ/@@download/ENCFF874QPZ.bigBed hg19 released low read depth missing control alignments ENCFF071XJV bigBed narrowPeak peaks ENCSR657EOF ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFRKB-human ENCAB097XCT DNA False 2016-06-14 ENCODE 1, 2 ENCFF235FNK 12946062 ENCODE Processing Pipeline 589a351dc423d0137b58d5e23f79f201 https://www.encodeproject.org/files/ENCFF071XJV/@@download/ENCFF071XJV.bigBed hg19 released low read depth missing control alignments ENCFF338NAH bed narrowPeak peaks ENCSR657EOF ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFRKB-human ENCAB097XCT DNA False 2016-06-14 ENCODE 2 ENCFF051LWI, ENCFF943WPZ 6424347 ENCODE Processing Pipeline a0e6904c4853be483cc4109cec75962b https://www.encodeproject.org/files/ENCFF338NAH/@@download/ENCFF338NAH.bed.gz hg19 released low read depth missing control alignments ENCFF949DRZ bam unfiltered alignments ENCSR657EOF ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFRKB-human ENCAB097XCT DNA False 2016-06-14 ENCODE 1 100 ENCFF139VNK, ENCFF643CGH, ENCFF705WPL 3220934712 ENCODE Processing Pipeline cffa314aa166abd8bdb0eda51f636c0e https://www.encodeproject.org/files/ENCFF949DRZ/@@download/ENCFF949DRZ.bam GRCh38 released low read depth missing control alignments ENCFF608FVU bam unfiltered alignments ENCSR657EOF ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFRKB-human ENCAB097XCT DNA False 2016-06-14 ENCODE 2 100 ENCFF340VHI, ENCFF643CGH, ENCFF710XSY 2690686850 ENCODE Processing Pipeline 4a54df6c05b0d1c57d7961a9a645db9c https://www.encodeproject.org/files/ENCFF608FVU/@@download/ENCFF608FVU.bam GRCh38 released low read depth missing control alignments ENCFF530UEA bam alignments ENCSR657EOF ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFRKB-human ENCAB097XCT DNA False 2016-06-14 ENCODE 2 100 ENCFF340VHI, ENCFF643CGH, ENCFF710XSY 2328187559 ENCODE Processing Pipeline 33a0d391a881b3f8d4fa9f09194acd91 https://www.encodeproject.org/files/ENCFF530UEA/@@download/ENCFF530UEA.bam GRCh38 released low read depth missing control alignments ENCFF437UWB bam alignments ENCSR657EOF ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFRKB-human ENCAB097XCT DNA False 2016-06-14 ENCODE 1 100 ENCFF139VNK, ENCFF643CGH, ENCFF705WPL 2738955274 ENCODE Processing Pipeline bab04e0a09c61bb552c00d92c160d03b https://www.encodeproject.org/files/ENCFF437UWB/@@download/ENCFF437UWB.bam GRCh38 released low read depth missing control alignments ENCFF719ZSH bigWig signal p-value ENCSR657EOF ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFRKB-human ENCAB097XCT DNA False 2016-06-14 ENCODE 1 ENCFF437UWB 866283584 ENCODE Processing Pipeline 38623c62f03035f97adc4e1e9e1e20e2 https://www.encodeproject.org/files/ENCFF719ZSH/@@download/ENCFF719ZSH.bigWig GRCh38 released low read depth missing control alignments ENCFF886TDI bigWig signal p-value ENCSR657EOF ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFRKB-human ENCAB097XCT DNA False 2016-06-14 ENCODE 2 ENCFF530UEA 869541527 ENCODE Processing Pipeline 9a49e99a425741d1ca3e0aef361fc4f9 https://www.encodeproject.org/files/ENCFF886TDI/@@download/ENCFF886TDI.bigWig GRCh38 released low read depth missing control alignments ENCFF863LOZ bigWig signal p-value ENCSR657EOF ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFRKB-human ENCAB097XCT DNA False 2016-06-14 ENCODE 1, 2 ENCFF437UWB, ENCFF530UEA 1668878115 ENCODE Processing Pipeline f49101ec583862f7e5c1645ccb418de9 https://www.encodeproject.org/files/ENCFF863LOZ/@@download/ENCFF863LOZ.bigWig GRCh38 released low read depth missing control alignments ENCFF753ABR bigWig fold change over control ENCSR657EOF ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFRKB-human ENCAB097XCT DNA False 2016-06-14 ENCODE 1 ENCFF437UWB 905524600 ENCODE Processing Pipeline 1d9adc1daad428df7968ea30195a8f52 https://www.encodeproject.org/files/ENCFF753ABR/@@download/ENCFF753ABR.bigWig GRCh38 released low read depth missing control alignments ENCFF924PYI bigWig fold change over control ENCSR657EOF ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFRKB-human ENCAB097XCT DNA False 2016-06-14 ENCODE 2 ENCFF530UEA 814607484 ENCODE Processing Pipeline 6253159040dee6b872bcd278ec03d4ec https://www.encodeproject.org/files/ENCFF924PYI/@@download/ENCFF924PYI.bigWig GRCh38 released low read depth missing control alignments ENCFF595VMB bigWig fold change over control ENCSR657EOF ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFRKB-human ENCAB097XCT DNA False 2016-06-14 ENCODE 1, 2 ENCFF437UWB, ENCFF530UEA 1761959639 ENCODE Processing Pipeline 79a31ed0145b25b37bdd86509e17598d https://www.encodeproject.org/files/ENCFF595VMB/@@download/ENCFF595VMB.bigWig GRCh38 released low read depth missing control alignments ENCFF056XZH bed narrowPeak peaks ENCSR657EOF ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFRKB-human ENCAB097XCT DNA False 2016-06-14 ENCODE 1, 2 ENCFF437UWB, ENCFF530UEA 7229581 ENCODE Processing Pipeline e45d991eb36013ae2a8925b21f28e85a https://www.encodeproject.org/files/ENCFF056XZH/@@download/ENCFF056XZH.bed.gz GRCh38 released low read depth missing control alignments ENCFF489TBT bigBed narrowPeak peaks ENCSR657EOF ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFRKB-human ENCAB097XCT DNA False 2016-06-14 ENCODE 1, 2 ENCFF056XZH 12962411 ENCODE Processing Pipeline d15ece821d5bce263e7e8b37de4b7f5f https://www.encodeproject.org/files/ENCFF489TBT/@@download/ENCFF489TBT.bigBed GRCh38 released low read depth missing control alignments ENCFF417SCW bed narrowPeak peaks ENCSR657EOF ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFRKB-human ENCAB097XCT DNA False 2016-06-14 ENCODE 1 ENCFF437UWB 6483812 ENCODE Processing Pipeline 7705a328b6d10e6e54b76e6f1d028d3f https://www.encodeproject.org/files/ENCFF417SCW/@@download/ENCFF417SCW.bed.gz GRCh38 released low read depth missing control alignments ENCFF745PQT bed narrowPeak peaks ENCSR657EOF ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFRKB-human ENCAB097XCT DNA False 2016-06-14 ENCODE 2 ENCFF530UEA 6313784 ENCODE Processing Pipeline 3f0c6b3c3d9bc21c056b850a3413da4c https://www.encodeproject.org/files/ENCFF745PQT/@@download/ENCFF745PQT.bed.gz GRCh38 released low read depth missing control alignments ENCFF204JKX bigBed narrowPeak peaks ENCSR657EOF ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFRKB-human ENCAB097XCT DNA False 2016-06-14 ENCODE 1 ENCFF417SCW 13194777 ENCODE Processing Pipeline cdf6f041982ff1fe4cc29967fe199ce4 https://www.encodeproject.org/files/ENCFF204JKX/@@download/ENCFF204JKX.bigBed GRCh38 released low read depth missing control alignments ENCFF936AFN bigBed narrowPeak peaks ENCSR657EOF ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFRKB-human ENCAB097XCT DNA False 2016-06-14 ENCODE 2 ENCFF745PQT 13211961 ENCODE Processing Pipeline f8c3dc3cdf5a83426fc5fc38b265cdd0 https://www.encodeproject.org/files/ENCFF936AFN/@@download/ENCFF936AFN.bigBed GRCh38 released low read depth missing control alignments ENCFF317RVQ bigBed narrowPeak conservative idr thresholded peaks ENCSR657EOF ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFRKB-human ENCAB097XCT DNA False 2016-06-14 ENCODE 1, 2 ENCFF594KPG 999202 ENCODE Processing Pipeline 52c5c5662d44b46140f9026916a6f828 https://www.encodeproject.org/files/ENCFF317RVQ/@@download/ENCFF317RVQ.bigBed GRCh38 released low read depth missing control alignments ENCFF594KPG bed narrowPeak conservative idr thresholded peaks ENCSR657EOF ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFRKB-human ENCAB097XCT DNA False 2016-06-14 ENCODE 1, 2 ENCFF056XZH, ENCFF417SCW, ENCFF419RSJ, ENCFF745PQT 370146 ENCODE Processing Pipeline c74b7f4b0ef067d037295ce82b74a579 https://www.encodeproject.org/files/ENCFF594KPG/@@download/ENCFF594KPG.bed.gz GRCh38 released low read depth missing control alignments ENCFF158FUG bed narrowPeak optimal idr thresholded peaks ENCSR657EOF ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFRKB-human ENCAB097XCT DNA False 2016-06-14 ENCODE 1, 2 ENCFF056XZH, ENCFF417SCW, ENCFF419RSJ, ENCFF745PQT 435320 ENCODE Processing Pipeline 7ac60df853db86986c8c15d8e9875565 https://www.encodeproject.org/files/ENCFF158FUG/@@download/ENCFF158FUG.bed.gz GRCh38 released low read depth missing control alignments ENCFF528NXU bigBed narrowPeak optimal idr thresholded peaks ENCSR657EOF ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFRKB-human ENCAB097XCT DNA False 2016-06-14 ENCODE 1, 2 ENCFF158FUG 1148303 ENCODE Processing Pipeline 380752efbbe681b923440e457a7daa23 https://www.encodeproject.org/files/ENCFF528NXU/@@download/ENCFF528NXU.bigBed GRCh38 released low read depth missing control alignments ENCFF969DLL bigBed narrowPeak conservative idr thresholded peaks ENCSR657EOF ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFRKB-human ENCAB097XCT DNA False 2016-06-14 ENCODE 1, 2 ENCFF739UMP 616170 ENCODE Processing Pipeline f11b9cad9264cf9172275117e9caeb3a https://www.encodeproject.org/files/ENCFF969DLL/@@download/ENCFF969DLL.bigBed hg19 released low read depth missing control alignments ENCFF157UUF bed narrowPeak optimal idr thresholded peaks ENCSR657EOF ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFRKB-human ENCAB097XCT DNA False 2016-06-14 ENCODE 1, 2 ENCFF001TDO, ENCFF235FNK, ENCFF338NAH, ENCFF674FOQ 360420 ENCODE Processing Pipeline f149fb690dd6079819477e00024ce227 https://www.encodeproject.org/files/ENCFF157UUF/@@download/ENCFF157UUF.bed.gz hg19 released low read depth missing control alignments ENCFF739UMP bed narrowPeak conservative idr thresholded peaks ENCSR657EOF ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFRKB-human ENCAB097XCT DNA False 2016-06-14 ENCODE 1, 2 ENCFF001TDO, ENCFF235FNK, ENCFF338NAH, ENCFF674FOQ 297237 ENCODE Processing Pipeline ae1c7cdfdbb5cd15b1bfc698e6f18bd4 https://www.encodeproject.org/files/ENCFF739UMP/@@download/ENCFF739UMP.bed.gz hg19 released low read depth missing control alignments ENCFF320PSC bigBed narrowPeak optimal idr thresholded peaks ENCSR657EOF ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFRKB-human ENCAB097XCT DNA False 2016-06-14 ENCODE 1, 2 ENCFF157UUF 708695 ENCODE Processing Pipeline c6ea7c7549f8be12fdd4afc0d7db85b7 https://www.encodeproject.org/files/ENCFF320PSC/@@download/ENCFF320PSC.bigBed hg19 released low read depth missing control alignments ENCFF614QMU bam unfiltered alignments ENCSR707QWA ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2F6-human ENCAB854ATP DNA False 2016-06-28 ENCODE 1 50 ENCFF145XWH, ENCFF807MUK 1202461527 ENCODE Processing Pipeline 9c4c5a56287dba4abfba079de593f12a https://www.encodeproject.org/files/ENCFF614QMU/@@download/ENCFF614QMU.bam hg19 released borderline replicate concordance, low read depth, antibody characterized with exemption ENCFF433QAO bam unfiltered alignments ENCSR707QWA ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2F6-human ENCAB854ATP DNA False 2016-06-28 ENCODE 2 50 ENCFF807MUK, ENCFF976LPV 2137233063 ENCODE Processing Pipeline 1cced6a8e6b12b936f359941403bd23a https://www.encodeproject.org/files/ENCFF433QAO/@@download/ENCFF433QAO.bam hg19 released borderline replicate concordance, low read depth, antibody characterized with exemption ENCFF976LPV fastq reads ENCSR707QWA ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2F6-human ENCAB854ATP DNA False 2016-06-28 ENCODE 2 1 50 single-ended 1991175803 Richard Myers, HAIB ff58a3ef3fbd01bf5ca5d55027036db5 SRA:SRR5339190 https://www.encodeproject.org/files/ENCFF976LPV/@@download/ENCFF976LPV.fastq.gz Illumina HiSeq 2000 /files/ENCFF993VKM/ released borderline replicate concordance, low read depth, antibody characterized with exemption ENCFF145XWH fastq reads ENCSR707QWA ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2F6-human ENCAB854ATP DNA False 2016-06-28 ENCODE 1 1 50 single-ended 1133790547 Richard Myers, HAIB 6e65e582ef48c41ea94fdca22364fee7 SRA:SRR5339191 https://www.encodeproject.org/files/ENCFF145XWH/@@download/ENCFF145XWH.fastq.gz Illumina HiSeq 2000 /files/ENCFF913JVQ/ released borderline replicate concordance, low read depth, antibody characterized with exemption ENCFF688UQF bam alignments ENCSR707QWA ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2F6-human ENCAB854ATP DNA False 2016-06-28 ENCODE 1 50 ENCFF145XWH, ENCFF807MUK 870950465 ENCODE Processing Pipeline 5d5bfe40daf05eaf1150cd1e03e6db20 https://www.encodeproject.org/files/ENCFF688UQF/@@download/ENCFF688UQF.bam hg19 released borderline replicate concordance, low read depth, antibody characterized with exemption ENCFF361KFD bam alignments ENCSR707QWA ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2F6-human ENCAB854ATP DNA False 2016-06-28 ENCODE 2 50 ENCFF807MUK, ENCFF976LPV 1553484646 ENCODE Processing Pipeline 9730f0150ab658d9495a8477c5e3e907 https://www.encodeproject.org/files/ENCFF361KFD/@@download/ENCFF361KFD.bam hg19 released borderline replicate concordance, low read depth, antibody characterized with exemption ENCFF142EXA bigWig fold change over control ENCSR707QWA ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2F6-human ENCAB854ATP DNA False 2016-06-28 ENCODE 1, 2 ENCFF361KFD, ENCFF444TNY, ENCFF688UQF, ENCFF847YDJ 1237920560 ENCODE Processing Pipeline 6b5141d7be097fcafe97861b7cbbd912 https://www.encodeproject.org/files/ENCFF142EXA/@@download/ENCFF142EXA.bigWig hg19 released borderline replicate concordance, low read depth, antibody characterized with exemption ENCFF106WRW bed narrowPeak peaks ENCSR707QWA ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2F6-human ENCAB854ATP DNA False 2016-06-28 ENCODE 1 ENCFF444TNY, ENCFF688UQF, ENCFF847YDJ 6366354 ENCODE Processing Pipeline 87292ab1949c87c6aaaff0e84e4cf796 https://www.encodeproject.org/files/ENCFF106WRW/@@download/ENCFF106WRW.bed.gz hg19 released borderline replicate concordance, low read depth, antibody characterized with exemption ENCFF134OVY bed narrowPeak peaks ENCSR707QWA ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2F6-human ENCAB854ATP DNA False 2016-06-28 ENCODE 1, 2 ENCFF361KFD, ENCFF444TNY, ENCFF688UQF, ENCFF847YDJ 7106902 ENCODE Processing Pipeline 82477c0d9e81006cd37be7bcac866750 https://www.encodeproject.org/files/ENCFF134OVY/@@download/ENCFF134OVY.bed.gz hg19 released borderline replicate concordance, low read depth, antibody characterized with exemption ENCFF260TNQ bigBed narrowPeak peaks ENCSR707QWA ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2F6-human ENCAB854ATP DNA False 2016-06-28 ENCODE 2 ENCFF604XWK 13327494 ENCODE Processing Pipeline 7e1f288850acef71ad725b81a94cf0e7 https://www.encodeproject.org/files/ENCFF260TNQ/@@download/ENCFF260TNQ.bigBed hg19 released borderline replicate concordance, low read depth, antibody characterized with exemption ENCFF723HLA bigBed narrowPeak optimal idr thresholded peaks ENCSR707QWA ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2F6-human ENCAB854ATP DNA False 2016-06-28 ENCODE 1, 2 ENCFF712AXK 852224 ENCODE Processing Pipeline b4e0f71242a503b01ec23125bd06e2d9 https://www.encodeproject.org/files/ENCFF723HLA/@@download/ENCFF723HLA.bigBed hg19 released borderline replicate concordance, low read depth, antibody characterized with exemption ENCFF625WOU bigWig signal p-value ENCSR707QWA ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2F6-human ENCAB854ATP DNA False 2016-06-28 ENCODE 1 ENCFF444TNY, ENCFF688UQF, ENCFF847YDJ 897184444 ENCODE Processing Pipeline 0dbb780638c27528c2d3fd3038f0ee5c https://www.encodeproject.org/files/ENCFF625WOU/@@download/ENCFF625WOU.bigWig hg19 released borderline replicate concordance, low read depth, antibody characterized with exemption ENCFF771LDJ bigWig signal p-value ENCSR707QWA ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2F6-human ENCAB854ATP DNA False 2016-06-28 ENCODE 2 ENCFF361KFD, ENCFF444TNY, ENCFF847YDJ 1083279801 ENCODE Processing Pipeline 6f8019099fed8b4e893453ac47d71e3a https://www.encodeproject.org/files/ENCFF771LDJ/@@download/ENCFF771LDJ.bigWig hg19 released borderline replicate concordance, low read depth, antibody characterized with exemption ENCFF858HYY bigBed narrowPeak peaks ENCSR707QWA ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2F6-human ENCAB854ATP DNA False 2016-06-28 ENCODE 1, 2 ENCFF134OVY 13341332 ENCODE Processing Pipeline 2435bc697ab619a1807eec5d78072b83 https://www.encodeproject.org/files/ENCFF858HYY/@@download/ENCFF858HYY.bigBed hg19 released borderline replicate concordance, low read depth, antibody characterized with exemption ENCFF510ZUJ bed narrowPeak conservative idr thresholded peaks ENCSR707QWA ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2F6-human ENCAB854ATP DNA False 2016-06-28 ENCODE 1, 2 ENCFF001TDO, ENCFF106WRW, ENCFF134OVY, ENCFF604XWK 290077 ENCODE Processing Pipeline 854bcc3923d7bcf9c470288133d1a39a https://www.encodeproject.org/files/ENCFF510ZUJ/@@download/ENCFF510ZUJ.bed.gz hg19 released borderline replicate concordance, low read depth, antibody characterized with exemption ENCFF777AHA bigWig fold change over control ENCSR707QWA ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2F6-human ENCAB854ATP DNA False 2016-06-28 ENCODE 1 ENCFF444TNY, ENCFF688UQF, ENCFF847YDJ 655277915 ENCODE Processing Pipeline f4aea5eb3007b1a9ef063ddd7e09b54b https://www.encodeproject.org/files/ENCFF777AHA/@@download/ENCFF777AHA.bigWig hg19 released borderline replicate concordance, low read depth, antibody characterized with exemption ENCFF426QHL bigWig fold change over control ENCSR707QWA ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2F6-human ENCAB854ATP DNA False 2016-06-28 ENCODE 2 ENCFF361KFD, ENCFF444TNY, ENCFF847YDJ 971095580 ENCODE Processing Pipeline f4aeee2573c3ac9024a049c2be05ec22 https://www.encodeproject.org/files/ENCFF426QHL/@@download/ENCFF426QHL.bigWig hg19 released borderline replicate concordance, low read depth, antibody characterized with exemption ENCFF604XWK bed narrowPeak peaks ENCSR707QWA ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2F6-human ENCAB854ATP DNA False 2016-06-28 ENCODE 2 ENCFF361KFD, ENCFF444TNY, ENCFF847YDJ 6853798 ENCODE Processing Pipeline 0ce20453e7cc72bebc28e6ce7dddc3cf https://www.encodeproject.org/files/ENCFF604XWK/@@download/ENCFF604XWK.bed.gz hg19 released borderline replicate concordance, low read depth, antibody characterized with exemption ENCFF744AIV bigBed narrowPeak conservative idr thresholded peaks ENCSR707QWA ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2F6-human ENCAB854ATP DNA False 2016-06-28 ENCODE 1, 2 ENCFF510ZUJ 543381 ENCODE Processing Pipeline fa429c141a48a91f14e48f085d0347f2 https://www.encodeproject.org/files/ENCFF744AIV/@@download/ENCFF744AIV.bigBed hg19 released borderline replicate concordance, low read depth, antibody characterized with exemption ENCFF712AXK bed narrowPeak optimal idr thresholded peaks ENCSR707QWA ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2F6-human ENCAB854ATP DNA False 2016-06-28 ENCODE 1, 2 ENCFF001TDO, ENCFF106WRW, ENCFF134OVY, ENCFF604XWK 402996 ENCODE Processing Pipeline d4ef75a204c84efaad5df40feb9c957b https://www.encodeproject.org/files/ENCFF712AXK/@@download/ENCFF712AXK.bed.gz hg19 released borderline replicate concordance, low read depth, antibody characterized with exemption ENCFF162UCA bigWig signal p-value ENCSR707QWA ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2F6-human ENCAB854ATP DNA False 2016-06-28 ENCODE 1, 2 ENCFF361KFD, ENCFF444TNY, ENCFF688UQF, ENCFF847YDJ 1067290088 ENCODE Processing Pipeline 7125f2c195e0597d7f02b623f4d1680f https://www.encodeproject.org/files/ENCFF162UCA/@@download/ENCFF162UCA.bigWig hg19 released borderline replicate concordance, low read depth, antibody characterized with exemption ENCFF859UMJ bigBed narrowPeak peaks ENCSR707QWA ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2F6-human ENCAB854ATP DNA False 2016-06-28 ENCODE 1 ENCFF106WRW 13429133 ENCODE Processing Pipeline f7a395a2634ad7c049da2aca9b5aedad https://www.encodeproject.org/files/ENCFF859UMJ/@@download/ENCFF859UMJ.bigBed hg19 released borderline replicate concordance, low read depth, antibody characterized with exemption ENCFF127WCS bam unfiltered alignments ENCSR707QWA ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2F6-human ENCAB854ATP DNA False 2016-06-28 ENCODE 2 50 ENCFF643CGH, ENCFF976LPV 2144928174 ENCODE Processing Pipeline 5619dfdb9c1860af0895bb7d28766e14 https://www.encodeproject.org/files/ENCFF127WCS/@@download/ENCFF127WCS.bam GRCh38 released borderline replicate concordance, low read depth, antibody characterized with exemption ENCFF173BBS bam unfiltered alignments ENCSR707QWA ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2F6-human ENCAB854ATP DNA False 2016-06-28 ENCODE 1 50 ENCFF145XWH, ENCFF643CGH 1206302915 ENCODE Processing Pipeline 1fba86e86a196b71baef94983b3fc670 https://www.encodeproject.org/files/ENCFF173BBS/@@download/ENCFF173BBS.bam GRCh38 released borderline replicate concordance, low read depth, antibody characterized with exemption ENCFF908MXL bam alignments ENCSR707QWA ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2F6-human ENCAB854ATP DNA False 2016-06-28 ENCODE 1 50 ENCFF145XWH, ENCFF643CGH 870323233 ENCODE Processing Pipeline 388367b292ba90d799e6979265467ccf https://www.encodeproject.org/files/ENCFF908MXL/@@download/ENCFF908MXL.bam GRCh38 released borderline replicate concordance, low read depth, antibody characterized with exemption ENCFF507UJN bam alignments ENCSR707QWA ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2F6-human ENCAB854ATP DNA False 2016-06-28 ENCODE 2 50 ENCFF643CGH, ENCFF976LPV 1552861162 ENCODE Processing Pipeline acf33d519bd6b83854332dc830c71747 https://www.encodeproject.org/files/ENCFF507UJN/@@download/ENCFF507UJN.bam GRCh38 released borderline replicate concordance, low read depth, antibody characterized with exemption ENCFF897FKL bigWig signal p-value ENCSR707QWA ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2F6-human ENCAB854ATP DNA False 2016-06-28 ENCODE 1 ENCFF092PMQ, ENCFF162ZOO, ENCFF908MXL 979694991 ENCODE Processing Pipeline 7844d1eba988ca9906b6dc630cbaa640 https://www.encodeproject.org/files/ENCFF897FKL/@@download/ENCFF897FKL.bigWig GRCh38 released borderline replicate concordance, low read depth, antibody characterized with exemption ENCFF818QUH bigWig signal p-value ENCSR707QWA ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2F6-human ENCAB854ATP DNA False 2016-06-28 ENCODE 2 ENCFF092PMQ, ENCFF162ZOO, ENCFF507UJN 1081490730 ENCODE Processing Pipeline 0b1a6c874696af9bc53c78366dab868c https://www.encodeproject.org/files/ENCFF818QUH/@@download/ENCFF818QUH.bigWig GRCh38 released borderline replicate concordance, low read depth, antibody characterized with exemption ENCFF342EIJ bigWig signal p-value ENCSR707QWA ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2F6-human ENCAB854ATP DNA False 2016-06-28 ENCODE 1, 2 ENCFF092PMQ, ENCFF162ZOO, ENCFF507UJN, ENCFF908MXL 1112930840 ENCODE Processing Pipeline 084af16c8404bb02a449107791487392 https://www.encodeproject.org/files/ENCFF342EIJ/@@download/ENCFF342EIJ.bigWig GRCh38 released borderline replicate concordance, low read depth, antibody characterized with exemption ENCFF950ICC bigWig fold change over control ENCSR707QWA ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2F6-human ENCAB854ATP DNA False 2016-06-28 ENCODE 1 ENCFF092PMQ, ENCFF162ZOO, ENCFF908MXL 665114073 ENCODE Processing Pipeline 0fc42eb35b7228c89786349cd1152d9b https://www.encodeproject.org/files/ENCFF950ICC/@@download/ENCFF950ICC.bigWig GRCh38 released borderline replicate concordance, low read depth, antibody characterized with exemption ENCFF071PTI bigWig fold change over control ENCSR707QWA ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2F6-human ENCAB854ATP DNA False 2016-06-28 ENCODE 2 ENCFF092PMQ, ENCFF162ZOO, ENCFF507UJN 988742064 ENCODE Processing Pipeline 4b7132e14f36e9e13740b77b5ea1a3ba https://www.encodeproject.org/files/ENCFF071PTI/@@download/ENCFF071PTI.bigWig GRCh38 released borderline replicate concordance, low read depth, antibody characterized with exemption ENCFF745IWH bigWig fold change over control ENCSR707QWA ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2F6-human ENCAB854ATP DNA False 2016-06-28 ENCODE 1, 2 ENCFF092PMQ, ENCFF162ZOO, ENCFF507UJN, ENCFF908MXL 1260257715 ENCODE Processing Pipeline 0d50f01270cfd5e8e1c7d579c6907d5c https://www.encodeproject.org/files/ENCFF745IWH/@@download/ENCFF745IWH.bigWig GRCh38 released borderline replicate concordance, low read depth, antibody characterized with exemption ENCFF316RDN bed narrowPeak peaks ENCSR707QWA ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2F6-human ENCAB854ATP DNA False 2016-06-28 ENCODE 1 ENCFF092PMQ, ENCFF162ZOO, ENCFF908MXL 6196811 ENCODE Processing Pipeline 999516396eec2cde6ea1b7a2f132c990 https://www.encodeproject.org/files/ENCFF316RDN/@@download/ENCFF316RDN.bed.gz GRCh38 released borderline replicate concordance, low read depth, antibody characterized with exemption ENCFF951LYB bed narrowPeak conservative idr thresholded peaks ENCSR707QWA ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2F6-human ENCAB854ATP DNA False 2016-06-28 ENCODE 1, 2 ENCFF316RDN, ENCFF419RSJ, ENCFF526CVF, ENCFF864BPS 289679 ENCODE Processing Pipeline 133cad071ec1f2d8337e4f02f3575215 https://www.encodeproject.org/files/ENCFF951LYB/@@download/ENCFF951LYB.bed.gz GRCh38 released borderline replicate concordance, low read depth, antibody characterized with exemption ENCFF526CVF bed narrowPeak peaks ENCSR707QWA ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2F6-human ENCAB854ATP DNA False 2016-06-28 ENCODE 2 ENCFF092PMQ, ENCFF162ZOO, ENCFF507UJN 6743951 ENCODE Processing Pipeline 5cf4d36156dd1ec9a6f7b50c46b31fcb https://www.encodeproject.org/files/ENCFF526CVF/@@download/ENCFF526CVF.bed.gz GRCh38 released borderline replicate concordance, low read depth, antibody characterized with exemption ENCFF864BPS bed narrowPeak peaks ENCSR707QWA ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2F6-human ENCAB854ATP DNA False 2016-06-28 ENCODE 1, 2 ENCFF092PMQ, ENCFF162ZOO, ENCFF507UJN, ENCFF908MXL 7005842 ENCODE Processing Pipeline 5be9c56718d6ad65f3f2adf8ad6240f2 https://www.encodeproject.org/files/ENCFF864BPS/@@download/ENCFF864BPS.bed.gz GRCh38 released borderline replicate concordance, low read depth, antibody characterized with exemption ENCFF417JQB bigBed narrowPeak peaks ENCSR707QWA ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2F6-human ENCAB854ATP DNA False 2016-06-28 ENCODE 2 ENCFF526CVF 13329462 ENCODE Processing Pipeline 9cae20f683bd954b59e2c6e8f5f13196 https://www.encodeproject.org/files/ENCFF417JQB/@@download/ENCFF417JQB.bigBed GRCh38 released borderline replicate concordance, low read depth, antibody characterized with exemption ENCFF205QHL bigBed narrowPeak peaks ENCSR707QWA ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2F6-human ENCAB854ATP DNA False 2016-06-28 ENCODE 1 ENCFF316RDN 13415421 ENCODE Processing Pipeline e8ac445b27ca593a24cb65587a3fede0 https://www.encodeproject.org/files/ENCFF205QHL/@@download/ENCFF205QHL.bigBed GRCh38 released borderline replicate concordance, low read depth, antibody characterized with exemption ENCFF485ZCG bigBed narrowPeak peaks ENCSR707QWA ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2F6-human ENCAB854ATP DNA False 2016-06-28 ENCODE 1, 2 ENCFF864BPS 13360968 ENCODE Processing Pipeline d01b96c7ca80cc010cc47f4b6c2f5361 https://www.encodeproject.org/files/ENCFF485ZCG/@@download/ENCFF485ZCG.bigBed GRCh38 released borderline replicate concordance, low read depth, antibody characterized with exemption ENCFF194VBK bed narrowPeak optimal idr thresholded peaks ENCSR707QWA ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2F6-human ENCAB854ATP DNA False 2016-06-28 ENCODE 1, 2 ENCFF316RDN, ENCFF419RSJ, ENCFF526CVF, ENCFF864BPS 405789 ENCODE Processing Pipeline 851d5f8c99376f6433641934c9eeeb00 https://www.encodeproject.org/files/ENCFF194VBK/@@download/ENCFF194VBK.bed.gz GRCh38 released borderline replicate concordance, low read depth, antibody characterized with exemption ENCFF635MTS bigBed narrowPeak optimal idr thresholded peaks ENCSR707QWA ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2F6-human ENCAB854ATP DNA False 2016-06-28 ENCODE 1, 2 ENCFF194VBK 858369 ENCODE Processing Pipeline 9a5f019fcbfcbf5a28285f1e29474834 https://www.encodeproject.org/files/ENCFF635MTS/@@download/ENCFF635MTS.bigBed GRCh38 released borderline replicate concordance, low read depth, antibody characterized with exemption ENCFF863GGM bigBed narrowPeak conservative idr thresholded peaks ENCSR707QWA ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2F6-human ENCAB854ATP DNA False 2016-06-28 ENCODE 1, 2 ENCFF951LYB 544274 ENCODE Processing Pipeline 84fe2c515beb54418daabbfa8b1ce0f4 https://www.encodeproject.org/files/ENCFF863GGM/@@download/ENCFF863GGM.bigBed GRCh38 released borderline replicate concordance, low read depth, antibody characterized with exemption ENCFF000PYE bam alignments ENCSR000BNK ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCFL-human ENCAB000AFS DNA see document see document False 2011-07-18 ENCODE 1 ENCFF000PYP 581600207 Richard Myers, HAIB 49696e44cbf4ffcbc750f108b83346e2 https://www.encodeproject.org/files/ENCFF000PYE/@@download/ENCFF000PYE.bam hg19 archived borderline replicate concordance, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample poor library complexity, insufficient read depth, severe bottlenecking extremely low read depth, missing control alignments ENCFF000PYF bigBed broadPeak peaks ENCSR000BNK ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCFL-human ENCAB000AFS DNA see document see document False 2011-07-18 ENCODE 1 1 ENCFF001UJN 275046 Richard Myers, HAIB 6396ba0e521a5363d66100eb3c3c3810 https://www.encodeproject.org/files/ENCFF000PYF/@@download/ENCFF000PYF.bigBed hg19 archived borderline replicate concordance, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample poor library complexity, insufficient read depth, severe bottlenecking extremely low read depth, missing control alignments ENCFF000PYG bigBed broadPeak peaks ENCSR000BNK ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCFL-human ENCAB000AFS DNA see document see document False 2011-07-18 ENCODE 2 1 ENCFF001UJO 382472 Richard Myers, HAIB 3ebda10c3010ba36f750d445c9cc6a16 https://www.encodeproject.org/files/ENCFF000PYG/@@download/ENCFF000PYG.bigBed hg19 archived borderline replicate concordance, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample poor library complexity, insufficient read depth, severe bottlenecking extremely low read depth, missing control alignments ENCFF000PYH bam alignments ENCSR000BNK ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCFL-human ENCAB000AFS DNA see document see document False 2011-07-18 ENCODE 2 ENCFF000PYR 738742427 Richard Myers, HAIB 0063dade9f891f0c874c639f25ba0f22 https://www.encodeproject.org/files/ENCFF000PYH/@@download/ENCFF000PYH.bam hg19 archived borderline replicate concordance, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample poor library complexity, insufficient read depth, severe bottlenecking extremely low read depth, missing control alignments ENCFF000PYI bigWig raw signal ENCSR000BNK ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCFL-human ENCAB000AFS DNA see document see document False 2011-07-18 ENCODE 1 1 19745066 Richard Myers, HAIB da32d50f493b4262fbe71661e3438cc0 https://www.encodeproject.org/files/ENCFF000PYI/@@download/ENCFF000PYI.bigWig hg19 archived borderline replicate concordance, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample, missing derived_from poor library complexity, insufficient read depth, severe bottlenecking extremely low read depth, missing control alignments ENCFF000PYK bigWig raw signal ENCSR000BNK ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCFL-human ENCAB000AFS DNA see document see document False 2011-07-18 ENCODE 2 1 15863102 Richard Myers, HAIB 7c5708437ce525568c2d1e33e7e2d450 https://www.encodeproject.org/files/ENCFF000PYK/@@download/ENCFF000PYK.bigWig hg19 archived borderline replicate concordance, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample, missing derived_from poor library complexity, insufficient read depth, severe bottlenecking extremely low read depth, missing control alignments ENCFF000PYP fastq reads ENCSR000BNK ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCFL-human ENCAB000AFS DNA see document see document False 2011-07-18 ENCODE 1 1 36 single-ended 588274246 Richard Myers, HAIB ca3d789662155665e902f7500085029a https://www.encodeproject.org/files/ENCFF000PYP/@@download/ENCFF000PYP.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000QEX/ released borderline replicate concordance, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample poor library complexity, insufficient read depth, severe bottlenecking extremely low read depth, missing control alignments ENCFF000PYR fastq reads ENCSR000BNK ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCFL-human ENCAB000AFS DNA see document see document False 2011-07-18 ENCODE 2 1 36 single-ended 751818317 Richard Myers, HAIB 8d178e051fa0dfebc6472db97887526a https://www.encodeproject.org/files/ENCFF000PYR/@@download/ENCFF000PYR.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000QEZ/ released borderline replicate concordance, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample poor library complexity, insufficient read depth, severe bottlenecking extremely low read depth, missing control alignments ENCFF001UJN bed broadPeak peaks ENCSR000BNK ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCFL-human ENCAB000AFS DNA see document see document False 2011-07-18 ENCODE 1 1 133235 Richard Myers, HAIB 494cf2eb4a4e61af4f28cbdabb92e34f https://www.encodeproject.org/files/ENCFF001UJN/@@download/ENCFF001UJN.bed.gz hg19 archived borderline replicate concordance, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample, missing derived_from poor library complexity, insufficient read depth, severe bottlenecking extremely low read depth, missing control alignments ENCFF001UJO bed broadPeak peaks ENCSR000BNK ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCFL-human ENCAB000AFS DNA see document see document False 2011-07-18 ENCODE 2 1 205299 Richard Myers, HAIB 46c1731bacab7c50cbc3bdafe122866b https://www.encodeproject.org/files/ENCFF001UJO/@@download/ENCFF001UJO.bed.gz hg19 archived borderline replicate concordance, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample, missing derived_from poor library complexity, insufficient read depth, severe bottlenecking extremely low read depth, missing control alignments ENCFF002CLT bed narrowPeak optimal idr thresholded peaks ENCSR000BNK ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCFL-human ENCAB000AFS DNA see document see document False 2011-07-18 ENCODE 223604 ENCODE Consortium Analysis Working Group be3ab73eefd11e9244d32e5ff3f9e878 https://www.encodeproject.org/files/ENCFF002CLT/@@download/ENCFF002CLT.bed.gz hg19 archived borderline replicate concordance, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample, missing derived_from poor library complexity, insufficient read depth, severe bottlenecking extremely low read depth, missing control alignments ENCFF562MZN bigBed narrowPeak optimal idr thresholded peaks ENCSR000BNK ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCFL-human ENCAB000AFS DNA see document see document False 2011-07-18 ENCODE ENCFF002CLT 493500 ENCODE Consortium 56c823068640dad5f827e1f5ced547e0 https://www.encodeproject.org/files/ENCFF562MZN/@@download/ENCFF562MZN.bigBed hg19 archived borderline replicate concordance, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample poor library complexity, insufficient read depth, severe bottlenecking extremely low read depth, missing control alignments ENCFF454MMY bam alignments ENCSR000BNK ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCFL-human ENCAB000AFS DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000PYP, ENCFF643CGH 173515741 ENCODE Processing Pipeline 2ae305446e2f9ccff0aa694687976fe1 https://www.encodeproject.org/files/ENCFF454MMY/@@download/ENCFF454MMY.bam GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample poor library complexity, insufficient read depth, severe bottlenecking extremely low read depth, missing control alignments ENCFF674NLR bam unfiltered alignments ENCSR000BNK ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCFL-human ENCAB000AFS DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000PYP, ENCFF643CGH 681035261 ENCODE Processing Pipeline ebd348aae1fd387c00f3be199a94c8e5 https://www.encodeproject.org/files/ENCFF674NLR/@@download/ENCFF674NLR.bam GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample poor library complexity, insufficient read depth, severe bottlenecking extremely low read depth, missing control alignments ENCFF310MOR bam alignments ENCSR000BNK ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCFL-human ENCAB000AFS DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000PYR, ENCFF643CGH 358057678 ENCODE Processing Pipeline d10690068504fe0172c3c4c3524ab20a https://www.encodeproject.org/files/ENCFF310MOR/@@download/ENCFF310MOR.bam GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample poor library complexity, insufficient read depth, severe bottlenecking extremely low read depth, missing control alignments ENCFF186CHS bam unfiltered alignments ENCSR000BNK ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCFL-human ENCAB000AFS DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000PYR, ENCFF643CGH 885125423 ENCODE Processing Pipeline 158c7a4efa87936c14ecf0d1086a6dad https://www.encodeproject.org/files/ENCFF186CHS/@@download/ENCFF186CHS.bam GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample poor library complexity, insufficient read depth, severe bottlenecking extremely low read depth, missing control alignments ENCFF097SZB bam alignments ENCSR000BNK ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCFL-human ENCAB000AFS DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000PYP, ENCFF807MUK 173750695 ENCODE Processing Pipeline 43dec3433f9a8fd555d3943a7234b628 https://www.encodeproject.org/files/ENCFF097SZB/@@download/ENCFF097SZB.bam hg19 released borderline replicate concordance, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample poor library complexity, insufficient read depth, severe bottlenecking extremely low read depth, missing control alignments ENCFF072NCZ bam unfiltered alignments ENCSR000BNK ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCFL-human ENCAB000AFS DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000PYP, ENCFF807MUK 678667024 ENCODE Processing Pipeline 750f1c4cedd76e75a0d1597551700b2a https://www.encodeproject.org/files/ENCFF072NCZ/@@download/ENCFF072NCZ.bam hg19 released borderline replicate concordance, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample poor library complexity, insufficient read depth, severe bottlenecking extremely low read depth, missing control alignments ENCFF487BCT bam alignments ENCSR000BNK ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCFL-human ENCAB000AFS DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000PYR, ENCFF807MUK 358358664 ENCODE Processing Pipeline 63fb3ab8092b08728b1f64e5f62bcdf7 https://www.encodeproject.org/files/ENCFF487BCT/@@download/ENCFF487BCT.bam hg19 released borderline replicate concordance, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample poor library complexity, insufficient read depth, severe bottlenecking extremely low read depth, missing control alignments ENCFF045OLP bam unfiltered alignments ENCSR000BNK ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCFL-human ENCAB000AFS DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000PYR, ENCFF807MUK 882820742 ENCODE Processing Pipeline 96707e647b0c91d995d9bd2450d02705 https://www.encodeproject.org/files/ENCFF045OLP/@@download/ENCFF045OLP.bam hg19 released borderline replicate concordance, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample poor library complexity, insufficient read depth, severe bottlenecking extremely low read depth, missing control alignments ENCFF657ZXF bigWig signal p-value ENCSR000BNK ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCFL-human ENCAB000AFS DNA see document see document False 2011-07-18 ENCODE 1 ENCFF454MMY 400274188 ENCODE Processing Pipeline 7d4f924a624e69aeca2dfd07de5ce52f https://www.encodeproject.org/files/ENCFF657ZXF/@@download/ENCFF657ZXF.bigWig GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample poor library complexity, insufficient read depth, severe bottlenecking extremely low read depth, missing control alignments ENCFF815MAO bigWig signal p-value ENCSR000BNK ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCFL-human ENCAB000AFS DNA see document see document False 2011-07-18 ENCODE 2 ENCFF310MOR 397111095 ENCODE Processing Pipeline 5450dccba3109d89f02da4ca57621227 https://www.encodeproject.org/files/ENCFF815MAO/@@download/ENCFF815MAO.bigWig GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample poor library complexity, insufficient read depth, severe bottlenecking extremely low read depth, missing control alignments ENCFF390UEN bigWig signal p-value ENCSR000BNK ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCFL-human ENCAB000AFS DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF310MOR, ENCFF454MMY 430598775 ENCODE Processing Pipeline 7d313fa2c531cb52f14d0839a7d2fc44 https://www.encodeproject.org/files/ENCFF390UEN/@@download/ENCFF390UEN.bigWig GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample poor library complexity, insufficient read depth, severe bottlenecking extremely low read depth, missing control alignments ENCFF239AZX bigWig fold change over control ENCSR000BNK ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCFL-human ENCAB000AFS DNA see document see document False 2011-07-18 ENCODE 1 ENCFF454MMY 113570051 ENCODE Processing Pipeline 0d3a44e974a4b81278a92c1bae3aeadc https://www.encodeproject.org/files/ENCFF239AZX/@@download/ENCFF239AZX.bigWig GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample poor library complexity, insufficient read depth, severe bottlenecking extremely low read depth, missing control alignments ENCFF060KQV bigWig fold change over control ENCSR000BNK ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCFL-human ENCAB000AFS DNA see document see document False 2011-07-18 ENCODE 2 ENCFF310MOR 202666949 ENCODE Processing Pipeline 403be738afacba5a3148f7c209178631 https://www.encodeproject.org/files/ENCFF060KQV/@@download/ENCFF060KQV.bigWig GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample poor library complexity, insufficient read depth, severe bottlenecking extremely low read depth, missing control alignments ENCFF694EHL bigWig fold change over control ENCSR000BNK ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCFL-human ENCAB000AFS DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF310MOR, ENCFF454MMY 288288967 ENCODE Processing Pipeline eb03a9a739328b05e1723a59bdd8e8df https://www.encodeproject.org/files/ENCFF694EHL/@@download/ENCFF694EHL.bigWig GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample poor library complexity, insufficient read depth, severe bottlenecking extremely low read depth, missing control alignments ENCFF036DBK bed narrowPeak peaks ENCSR000BNK ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCFL-human ENCAB000AFS DNA see document see document False 2011-07-18 ENCODE 1 ENCFF454MMY 1665736 ENCODE Processing Pipeline 3fce9268c8cc973914edfc7dd81b2b3f https://www.encodeproject.org/files/ENCFF036DBK/@@download/ENCFF036DBK.bed.gz GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample poor library complexity, insufficient read depth, severe bottlenecking extremely low read depth, missing control alignments ENCFF943BRX bed narrowPeak peaks ENCSR000BNK ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCFL-human ENCAB000AFS DNA see document see document False 2011-07-18 ENCODE 2 ENCFF310MOR 3851100 ENCODE Processing Pipeline d02cbd0eb2e02c428d530666e0d72eb9 https://www.encodeproject.org/files/ENCFF943BRX/@@download/ENCFF943BRX.bed.gz GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample poor library complexity, insufficient read depth, severe bottlenecking extremely low read depth, missing control alignments ENCFF081QMM bed narrowPeak peaks ENCSR000BNK ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCFL-human ENCAB000AFS DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF310MOR, ENCFF454MMY 4200248 ENCODE Processing Pipeline 757833ea1c24a80ef783e81e28aa707b https://www.encodeproject.org/files/ENCFF081QMM/@@download/ENCFF081QMM.bed.gz GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample poor library complexity, insufficient read depth, severe bottlenecking extremely low read depth, missing control alignments ENCFF278WKB bigBed narrowPeak peaks ENCSR000BNK ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCFL-human ENCAB000AFS DNA see document see document False 2011-07-18 ENCODE 1 ENCFF036DBK 3620948 ENCODE Processing Pipeline 2ea9cc7a22bccafe69b31b300c96e100 https://www.encodeproject.org/files/ENCFF278WKB/@@download/ENCFF278WKB.bigBed GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample poor library complexity, insufficient read depth, severe bottlenecking extremely low read depth, missing control alignments ENCFF737SZP bigBed narrowPeak peaks ENCSR000BNK ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCFL-human ENCAB000AFS DNA see document see document False 2011-07-18 ENCODE 2 ENCFF943BRX 8156710 ENCODE Processing Pipeline ee5d319a6908ee567d08c2eab36cb739 https://www.encodeproject.org/files/ENCFF737SZP/@@download/ENCFF737SZP.bigBed GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample poor library complexity, insufficient read depth, severe bottlenecking extremely low read depth, missing control alignments ENCFF380EWF bigBed narrowPeak peaks ENCSR000BNK ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCFL-human ENCAB000AFS DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF081QMM 8611472 ENCODE Processing Pipeline b37c6722370154b6712412218944c0fa https://www.encodeproject.org/files/ENCFF380EWF/@@download/ENCFF380EWF.bigBed GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample poor library complexity, insufficient read depth, severe bottlenecking extremely low read depth, missing control alignments ENCFF653WEF bed narrowPeak conservative idr thresholded peaks ENCSR000BNK ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCFL-human ENCAB000AFS DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF036DBK, ENCFF081QMM, ENCFF419RSJ, ENCFF943BRX 177236 ENCODE Processing Pipeline de17ec2cde176b415fa6a7cade839301 https://www.encodeproject.org/files/ENCFF653WEF/@@download/ENCFF653WEF.bed.gz GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample poor library complexity, insufficient read depth, severe bottlenecking extremely low read depth, missing control alignments ENCFF980TKJ bigBed narrowPeak conservative idr thresholded peaks ENCSR000BNK ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCFL-human ENCAB000AFS DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF653WEF 341691 ENCODE Processing Pipeline f15b85cdd0e519f27b99d8ef11b9fd41 https://www.encodeproject.org/files/ENCFF980TKJ/@@download/ENCFF980TKJ.bigBed GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample poor library complexity, insufficient read depth, severe bottlenecking extremely low read depth, missing control alignments ENCFF678TFE bed narrowPeak optimal idr thresholded peaks ENCSR000BNK ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCFL-human ENCAB000AFS DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF036DBK, ENCFF081QMM, ENCFF419RSJ, ENCFF943BRX 217116 ENCODE Processing Pipeline 52cf0413173f65ad29804dc0a8b17381 https://www.encodeproject.org/files/ENCFF678TFE/@@download/ENCFF678TFE.bed.gz GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample poor library complexity, insufficient read depth, severe bottlenecking extremely low read depth, missing control alignments ENCFF146UYC bigBed narrowPeak optimal idr thresholded peaks ENCSR000BNK ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCFL-human ENCAB000AFS DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF678TFE 394774 ENCODE Processing Pipeline 9e6d1985d87843fd310698c44fc38b80 https://www.encodeproject.org/files/ENCFF146UYC/@@download/ENCFF146UYC.bigBed GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample poor library complexity, insufficient read depth, severe bottlenecking extremely low read depth, missing control alignments ENCFF052RPO bigWig signal p-value ENCSR000BNK ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCFL-human ENCAB000AFS DNA see document see document False 2011-07-18 ENCODE 2 ENCFF235CSW, ENCFF487BCT, ENCFF750MIM 450819249 ENCODE Processing Pipeline fe5619b2a4d0ecab07249adf1f121877 https://www.encodeproject.org/files/ENCFF052RPO/@@download/ENCFF052RPO.bigWig hg19 released borderline replicate concordance, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample poor library complexity, insufficient read depth, severe bottlenecking extremely low read depth, missing control alignments ENCFF910GYP bigWig fold change over control ENCSR000BNK ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCFL-human ENCAB000AFS DNA see document see document False 2011-07-18 ENCODE 2 ENCFF235CSW, ENCFF487BCT, ENCFF750MIM 201454359 ENCODE Processing Pipeline 1be02799433ce4c31334546851751981 https://www.encodeproject.org/files/ENCFF910GYP/@@download/ENCFF910GYP.bigWig hg19 released borderline replicate concordance, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample poor library complexity, insufficient read depth, severe bottlenecking extremely low read depth, missing control alignments ENCFF722ARV bigBed narrowPeak peaks ENCSR000BNK ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCFL-human ENCAB000AFS DNA see document see document False 2011-07-18 ENCODE 2 ENCFF504VLL 8149902 ENCODE Processing Pipeline 9afb5072a7a17663c65ee79fa3c745b4 https://www.encodeproject.org/files/ENCFF722ARV/@@download/ENCFF722ARV.bigBed hg19 released borderline replicate concordance, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample poor library complexity, insufficient read depth, severe bottlenecking extremely low read depth, missing control alignments ENCFF504VLL bed narrowPeak peaks ENCSR000BNK ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCFL-human ENCAB000AFS DNA see document see document False 2011-07-18 ENCODE 2 ENCFF235CSW, ENCFF487BCT, ENCFF750MIM 3854933 ENCODE Processing Pipeline 7b78071f18880830ee29c30fccc52ff4 https://www.encodeproject.org/files/ENCFF504VLL/@@download/ENCFF504VLL.bed.gz hg19 released borderline replicate concordance, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample poor library complexity, insufficient read depth, severe bottlenecking extremely low read depth, missing control alignments ENCFF985NLY bed narrowPeak conservative idr thresholded peaks ENCSR000BNK ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCFL-human ENCAB000AFS DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF001TDO, ENCFF035SJF, ENCFF233FNU, ENCFF504VLL 176883 ENCODE Processing Pipeline d1e28c43b61324144bb7ef76058ed034 https://www.encodeproject.org/files/ENCFF985NLY/@@download/ENCFF985NLY.bed.gz hg19 released borderline replicate concordance, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample poor library complexity, insufficient read depth, severe bottlenecking extremely low read depth, missing control alignments ENCFF472SHK bigBed narrowPeak conservative idr thresholded peaks ENCSR000BNK ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCFL-human ENCAB000AFS DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF985NLY 340801 ENCODE Processing Pipeline ce0acdce80151d1bac8caf6668aaffef https://www.encodeproject.org/files/ENCFF472SHK/@@download/ENCFF472SHK.bigBed hg19 released borderline replicate concordance, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample poor library complexity, insufficient read depth, severe bottlenecking extremely low read depth, missing control alignments ENCFF589AZO bigWig fold change over control ENCSR000BNK ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCFL-human ENCAB000AFS DNA see document see document False 2011-07-18 ENCODE 1 ENCFF097SZB, ENCFF235CSW, ENCFF750MIM 115228672 ENCODE Processing Pipeline 7a133c9e1d47b76861df3a7cc9aff8c4 https://www.encodeproject.org/files/ENCFF589AZO/@@download/ENCFF589AZO.bigWig hg19 released borderline replicate concordance, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample poor library complexity, insufficient read depth, severe bottlenecking extremely low read depth, missing control alignments ENCFF233FNU bed narrowPeak peaks ENCSR000BNK ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCFL-human ENCAB000AFS DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF097SZB, ENCFF235CSW, ENCFF487BCT, ENCFF750MIM 4205550 ENCODE Processing Pipeline 7e134d0a151c975273856ba8f4c3c78a https://www.encodeproject.org/files/ENCFF233FNU/@@download/ENCFF233FNU.bed.gz hg19 released borderline replicate concordance, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample poor library complexity, insufficient read depth, severe bottlenecking extremely low read depth, missing control alignments ENCFF962FQM bed narrowPeak optimal idr thresholded peaks ENCSR000BNK ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCFL-human ENCAB000AFS DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF001TDO, ENCFF035SJF, ENCFF233FNU, ENCFF504VLL 216173 ENCODE Processing Pipeline 317367ecb7b8653dcc677b264e32d6d4 https://www.encodeproject.org/files/ENCFF962FQM/@@download/ENCFF962FQM.bed.gz hg19 released borderline replicate concordance, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample poor library complexity, insufficient read depth, severe bottlenecking extremely low read depth, missing control alignments ENCFF035SJF bed narrowPeak peaks ENCSR000BNK ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCFL-human ENCAB000AFS DNA see document see document False 2011-07-18 ENCODE 1 ENCFF097SZB, ENCFF235CSW, ENCFF750MIM 1679734 ENCODE Processing Pipeline 04bffe0c515af4aa90eeb9bb482f4cd8 https://www.encodeproject.org/files/ENCFF035SJF/@@download/ENCFF035SJF.bed.gz hg19 released borderline replicate concordance, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample poor library complexity, insufficient read depth, severe bottlenecking extremely low read depth, missing control alignments ENCFF427BSL bigBed narrowPeak peaks ENCSR000BNK ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCFL-human ENCAB000AFS DNA see document see document False 2011-07-18 ENCODE 1 ENCFF035SJF 3627469 ENCODE Processing Pipeline 87c91f79a724e8eeee52286bfe953d11 https://www.encodeproject.org/files/ENCFF427BSL/@@download/ENCFF427BSL.bigBed hg19 released borderline replicate concordance, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample poor library complexity, insufficient read depth, severe bottlenecking extremely low read depth, missing control alignments ENCFF904RAD bigBed narrowPeak peaks ENCSR000BNK ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCFL-human ENCAB000AFS DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF233FNU 8608396 ENCODE Processing Pipeline 2d535882c9558587dda2c66fda33edd9 https://www.encodeproject.org/files/ENCFF904RAD/@@download/ENCFF904RAD.bigBed hg19 released borderline replicate concordance, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample poor library complexity, insufficient read depth, severe bottlenecking extremely low read depth, missing control alignments ENCFF494DFS bigWig signal p-value ENCSR000BNK ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCFL-human ENCAB000AFS DNA see document see document False 2011-07-18 ENCODE 1 ENCFF097SZB, ENCFF235CSW, ENCFF750MIM 376863283 ENCODE Processing Pipeline 6cd7aaf4b56e76c04a5b8f589fe11887 https://www.encodeproject.org/files/ENCFF494DFS/@@download/ENCFF494DFS.bigWig hg19 released borderline replicate concordance, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample poor library complexity, insufficient read depth, severe bottlenecking extremely low read depth, missing control alignments ENCFF512KRM bigWig signal p-value ENCSR000BNK ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCFL-human ENCAB000AFS DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF097SZB, ENCFF235CSW, ENCFF487BCT, ENCFF750MIM 456529253 ENCODE Processing Pipeline 108e58942e11bd455dfa3ac876a36ced https://www.encodeproject.org/files/ENCFF512KRM/@@download/ENCFF512KRM.bigWig hg19 released borderline replicate concordance, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample poor library complexity, insufficient read depth, severe bottlenecking extremely low read depth, missing control alignments ENCFF648ABV bigWig fold change over control ENCSR000BNK ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCFL-human ENCAB000AFS DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF097SZB, ENCFF235CSW, ENCFF487BCT, ENCFF750MIM 288968924 ENCODE Processing Pipeline 0aa5801bca0b2fb3a9b105c303165d71 https://www.encodeproject.org/files/ENCFF648ABV/@@download/ENCFF648ABV.bigWig hg19 released borderline replicate concordance, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample poor library complexity, insufficient read depth, severe bottlenecking extremely low read depth, missing control alignments ENCFF435CYQ bigBed narrowPeak optimal idr thresholded peaks ENCSR000BNK ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCFL-human ENCAB000AFS DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF962FQM 393332 ENCODE Processing Pipeline 9fdbb3c9cc73ccb422ab6ff61da7e6c9 https://www.encodeproject.org/files/ENCFF435CYQ/@@download/ENCFF435CYQ.bigBed hg19 released borderline replicate concordance, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample poor library complexity, insufficient read depth, severe bottlenecking extremely low read depth, missing control alignments ENCFF899KBZ bam unfiltered alignments ENCSR972ZBV ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF7-human ENCAB000BMO DNA False 2014-07-07 ENCODE 1 100 ENCFF002DOR, ENCFF002EIJ, ENCFF807MUK 7450092621 ENCODE Processing Pipeline 6460b005995d6352c6e9e3d49cd459bd https://www.encodeproject.org/files/ENCFF899KBZ/@@download/ENCFF899KBZ.bam hg19 released mild to moderate bottlenecking, moderate library complexity ENCFF125QRO bam unfiltered alignments ENCSR972ZBV ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF7-human ENCAB000BMO DNA False 2014-07-07 ENCODE 2 100 ENCFF002DOV, ENCFF002DTY, ENCFF807MUK 5853999422 ENCODE Processing Pipeline cdee48436a3e33b19cf7117c5d298bd3 https://www.encodeproject.org/files/ENCFF125QRO/@@download/ENCFF125QRO.bam hg19 released mild to moderate bottlenecking, moderate library complexity ENCFF002DOR fastq reads ENCSR972ZBV ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF7-human ENCAB000BMO DNA False 2014-07-07 ENCODE 1 1 100 paired-ended 1 ENCFF002EIJ 3629889537 Michael Snyder, Stanford f5c98fd8e4644c34c51cf4090f80c6e4 SRA:SRR6214161 https://www.encodeproject.org/files/ENCFF002DOR/@@download/ENCFF002DOR.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFF/ released mild to moderate bottlenecking, moderate library complexity ENCFF002DOV fastq reads ENCSR972ZBV ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF7-human ENCAB000BMO DNA False 2014-07-07 ENCODE 2 1 100 paired-ended 2 ENCFF002DTY 2920279044 Michael Snyder, Stanford 0defe4bbf81ac4bfd2efae001a3bbf53 SRA:SRR6214162 https://www.encodeproject.org/files/ENCFF002DOV/@@download/ENCFF002DOV.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFA/ released mild to moderate bottlenecking, moderate library complexity ENCFF002DTY fastq reads ENCSR972ZBV ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF7-human ENCAB000BMO DNA False 2014-07-07 ENCODE 2 1 100 paired-ended 1 ENCFF002DOV 2766580075 Michael Snyder, Stanford daeb3fdfc83b36e02908aff32bd24ea5 SRA:SRR6214162 https://www.encodeproject.org/files/ENCFF002DTY/@@download/ENCFF002DTY.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFD/ released mild to moderate bottlenecking, moderate library complexity ENCFF002EIJ fastq reads ENCSR972ZBV ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF7-human ENCAB000BMO DNA False 2014-07-07 ENCODE 1 1 100 paired-ended 2 ENCFF002DOR 3611886500 Michael Snyder, Stanford ca80a6f0d6c109c6fe085962fa7f2f5b SRA:SRR6214161 https://www.encodeproject.org/files/ENCFF002EIJ/@@download/ENCFF002EIJ.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFH/ released mild to moderate bottlenecking, moderate library complexity ENCFF796HOG bam alignments ENCSR972ZBV ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF7-human ENCAB000BMO DNA False 2014-07-07 ENCODE 1 100 ENCFF002DOR, ENCFF002EIJ, ENCFF807MUK 5737596169 ENCODE Processing Pipeline 231e80e7db419207a15df492e565caae https://www.encodeproject.org/files/ENCFF796HOG/@@download/ENCFF796HOG.bam hg19 released mild to moderate bottlenecking, moderate library complexity ENCFF838YGO bam alignments ENCSR972ZBV ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF7-human ENCAB000BMO DNA False 2014-07-07 ENCODE 2 100 ENCFF002DOV, ENCFF002DTY, ENCFF807MUK 3973743130 ENCODE Processing Pipeline 0915bd4befaccde6935d0184f603492e https://www.encodeproject.org/files/ENCFF838YGO/@@download/ENCFF838YGO.bam hg19 released mild to moderate bottlenecking, moderate library complexity ENCFF548VBP bigWig signal p-value ENCSR972ZBV ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF7-human ENCAB000BMO DNA False 2014-07-07 ENCODE 2 ENCFF051LWI, ENCFF838YGO 942865231 ENCODE Processing Pipeline 27ba48f640e42271fbcceaeeb99ccac1 https://www.encodeproject.org/files/ENCFF548VBP/@@download/ENCFF548VBP.bigWig hg19 released mild to moderate bottlenecking, moderate library complexity ENCFF724PTF bigWig signal p-value ENCSR972ZBV ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF7-human ENCAB000BMO DNA False 2014-07-07 ENCODE 1, 2 ENCFF051LWI, ENCFF581ZJL, ENCFF796HOG, ENCFF838YGO 2066239123 ENCODE Processing Pipeline 60e40e1ebefc134d21b6f199ffd707d4 https://www.encodeproject.org/files/ENCFF724PTF/@@download/ENCFF724PTF.bigWig hg19 released mild to moderate bottlenecking, moderate library complexity ENCFF249KVC bigWig fold change over control ENCSR972ZBV ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF7-human ENCAB000BMO DNA False 2014-07-07 ENCODE 1, 2 ENCFF051LWI, ENCFF581ZJL, ENCFF796HOG, ENCFF838YGO 2218949274 ENCODE Processing Pipeline aa3681cc3af59e0f9ada5951479ac8aa https://www.encodeproject.org/files/ENCFF249KVC/@@download/ENCFF249KVC.bigWig hg19 released mild to moderate bottlenecking, moderate library complexity ENCFF256JHY bigWig fold change over control ENCSR972ZBV ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF7-human ENCAB000BMO DNA False 2014-07-07 ENCODE 2 ENCFF051LWI, ENCFF838YGO 1112858414 ENCODE Processing Pipeline 65bd77719065a7057ee27eb7ce293017 https://www.encodeproject.org/files/ENCFF256JHY/@@download/ENCFF256JHY.bigWig hg19 released mild to moderate bottlenecking, moderate library complexity ENCFF466NTV bam unfiltered alignments ENCSR972ZBV ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF7-human ENCAB000BMO DNA False 2014-07-07 ENCODE 1 100 ENCFF002DOR, ENCFF002EIJ, ENCFF643CGH 7453843475 ENCODE Processing Pipeline 75b3af05338d0aa92790a2442c03cc96 https://www.encodeproject.org/files/ENCFF466NTV/@@download/ENCFF466NTV.bam GRCh38 released mild to moderate bottlenecking, moderate library complexity ENCFF619XNM bam alignments ENCSR972ZBV ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF7-human ENCAB000BMO DNA False 2014-07-07 ENCODE 2 100 ENCFF002DOV, ENCFF002DTY, ENCFF643CGH 3972160132 ENCODE Processing Pipeline d5d8f49e3683195867c3fd38d60bc07d https://www.encodeproject.org/files/ENCFF619XNM/@@download/ENCFF619XNM.bam GRCh38 released mild to moderate bottlenecking, moderate library complexity ENCFF980GTC bam unfiltered alignments ENCSR972ZBV ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF7-human ENCAB000BMO DNA False 2014-07-07 ENCODE 2 100 ENCFF002DOV, ENCFF002DTY, ENCFF643CGH 5856639870 ENCODE Processing Pipeline 3beca96178b547ab61f30905eb465614 https://www.encodeproject.org/files/ENCFF980GTC/@@download/ENCFF980GTC.bam GRCh38 released mild to moderate bottlenecking, moderate library complexity ENCFF518PQY bam alignments ENCSR972ZBV ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF7-human ENCAB000BMO DNA False 2014-07-07 ENCODE 1 100 ENCFF002DOR, ENCFF002EIJ, ENCFF643CGH 5737080259 ENCODE Processing Pipeline 7912f4b31e53c5db0a279c12775f2c0c https://www.encodeproject.org/files/ENCFF518PQY/@@download/ENCFF518PQY.bam GRCh38 released mild to moderate bottlenecking, moderate library complexity ENCFF213EZL bigWig signal p-value ENCSR972ZBV ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF7-human ENCAB000BMO DNA False 2014-07-07 ENCODE 1 ENCFF518PQY, ENCFF910IKB 1376817191 ENCODE Processing Pipeline 73d96ad07c59a3afb769314d038fbc22 https://www.encodeproject.org/files/ENCFF213EZL/@@download/ENCFF213EZL.bigWig GRCh38 released mild to moderate bottlenecking, moderate library complexity ENCFF628ZMG bigWig signal p-value ENCSR972ZBV ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF7-human ENCAB000BMO DNA False 2014-07-07 ENCODE 2 ENCFF227IZS, ENCFF619XNM 1110882269 ENCODE Processing Pipeline af9a9b033c2cdfa7b682e7d9505b187f https://www.encodeproject.org/files/ENCFF628ZMG/@@download/ENCFF628ZMG.bigWig GRCh38 released mild to moderate bottlenecking, moderate library complexity ENCFF074QZE bigWig signal p-value ENCSR972ZBV ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF7-human ENCAB000BMO DNA False 2014-07-07 ENCODE 1, 2 ENCFF227IZS, ENCFF518PQY, ENCFF619XNM, ENCFF910IKB 1927175546 ENCODE Processing Pipeline 651072abdae84618b00ccd591ede7238 https://www.encodeproject.org/files/ENCFF074QZE/@@download/ENCFF074QZE.bigWig GRCh38 released mild to moderate bottlenecking, moderate library complexity ENCFF618ETX bigWig fold change over control ENCSR972ZBV ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF7-human ENCAB000BMO DNA False 2014-07-07 ENCODE 1 ENCFF518PQY, ENCFF910IKB 1460737035 ENCODE Processing Pipeline 6a4b466c62fdada73b6357ea5061a47f https://www.encodeproject.org/files/ENCFF618ETX/@@download/ENCFF618ETX.bigWig GRCh38 released mild to moderate bottlenecking, moderate library complexity ENCFF485VZV bigWig fold change over control ENCSR972ZBV ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF7-human ENCAB000BMO DNA False 2014-07-07 ENCODE 2 ENCFF227IZS, ENCFF619XNM 1109936948 ENCODE Processing Pipeline 26fd6c6c3b58fdb8ad2d6198a1cd0a20 https://www.encodeproject.org/files/ENCFF485VZV/@@download/ENCFF485VZV.bigWig GRCh38 released mild to moderate bottlenecking, moderate library complexity ENCFF204NFC bigWig fold change over control ENCSR972ZBV ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF7-human ENCAB000BMO DNA False 2014-07-07 ENCODE 1, 2 ENCFF227IZS, ENCFF518PQY, ENCFF619XNM, ENCFF910IKB 2221154097 ENCODE Processing Pipeline 756ada8bc462803fa1bfaeca52f99317 https://www.encodeproject.org/files/ENCFF204NFC/@@download/ENCFF204NFC.bigWig GRCh38 released mild to moderate bottlenecking, moderate library complexity ENCFF053GQK bed narrowPeak peaks ENCSR972ZBV ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF7-human ENCAB000BMO DNA False 2014-07-07 ENCODE 1, 2 ENCFF227IZS, ENCFF518PQY, ENCFF619XNM, ENCFF910IKB 7176048 ENCODE Processing Pipeline 67167dd55bd43d3b2f749aa62e309742 https://www.encodeproject.org/files/ENCFF053GQK/@@download/ENCFF053GQK.bed.gz GRCh38 released mild to moderate bottlenecking, moderate library complexity ENCFF250WMP bigBed narrowPeak conservative idr thresholded peaks ENCSR972ZBV ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF7-human ENCAB000BMO DNA False 2014-07-07 ENCODE 1, 2 ENCFF953PPE 1202094 ENCODE Processing Pipeline 908ab643b9e9bd292698b66d69410a5f https://www.encodeproject.org/files/ENCFF250WMP/@@download/ENCFF250WMP.bigBed GRCh38 released mild to moderate bottlenecking, moderate library complexity ENCFF371SJR bed narrowPeak optimal idr thresholded peaks ENCSR972ZBV ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF7-human ENCAB000BMO DNA False 2014-07-07 ENCODE 1, 2 ENCFF053GQK, ENCFF419RSJ, ENCFF819OTE, ENCFF926YYG 830259 ENCODE Processing Pipeline 669cb3b083f3eac46781498cc9db168d https://www.encodeproject.org/files/ENCFF371SJR/@@download/ENCFF371SJR.bed.gz GRCh38 released mild to moderate bottlenecking, moderate library complexity ENCFF926YYG bed narrowPeak peaks ENCSR972ZBV ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF7-human ENCAB000BMO DNA False 2014-07-07 ENCODE 2 ENCFF227IZS, ENCFF619XNM 6922287 ENCODE Processing Pipeline d54df60eed5c5c0ffb6a368777a9d7c4 https://www.encodeproject.org/files/ENCFF926YYG/@@download/ENCFF926YYG.bed.gz GRCh38 released mild to moderate bottlenecking, moderate library complexity ENCFF452XYR bigBed narrowPeak peaks ENCSR972ZBV ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF7-human ENCAB000BMO DNA False 2014-07-07 ENCODE 1, 2 ENCFF053GQK 12912811 ENCODE Processing Pipeline b0bd8d7879ec1706539767fb025a0c02 https://www.encodeproject.org/files/ENCFF452XYR/@@download/ENCFF452XYR.bigBed GRCh38 released mild to moderate bottlenecking, moderate library complexity ENCFF171DNP bigBed narrowPeak optimal idr thresholded peaks ENCSR972ZBV ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF7-human ENCAB000BMO DNA False 2014-07-07 ENCODE 1, 2 ENCFF371SJR 1465798 ENCODE Processing Pipeline 1f726c851302f95778d046fe1d1dfbcd https://www.encodeproject.org/files/ENCFF171DNP/@@download/ENCFF171DNP.bigBed GRCh38 released mild to moderate bottlenecking, moderate library complexity ENCFF770JHU bigBed narrowPeak peaks ENCSR972ZBV ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF7-human ENCAB000BMO DNA False 2014-07-07 ENCODE 1 ENCFF819OTE 12879029 ENCODE Processing Pipeline 410fbd91e361fd6649e38dc59acb2ffe https://www.encodeproject.org/files/ENCFF770JHU/@@download/ENCFF770JHU.bigBed GRCh38 released mild to moderate bottlenecking, moderate library complexity ENCFF782UPJ bigBed narrowPeak peaks ENCSR972ZBV ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF7-human ENCAB000BMO DNA False 2014-07-07 ENCODE 2 ENCFF926YYG 13225020 ENCODE Processing Pipeline 52090dc6c18a2a833cfbaaad40414fbe https://www.encodeproject.org/files/ENCFF782UPJ/@@download/ENCFF782UPJ.bigBed GRCh38 released mild to moderate bottlenecking, moderate library complexity ENCFF819OTE bed narrowPeak peaks ENCSR972ZBV ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF7-human ENCAB000BMO DNA False 2014-07-07 ENCODE 1 ENCFF518PQY, ENCFF910IKB 7056194 ENCODE Processing Pipeline 49c9a728e1764e56117ef606bba8b81b https://www.encodeproject.org/files/ENCFF819OTE/@@download/ENCFF819OTE.bed.gz GRCh38 released mild to moderate bottlenecking, moderate library complexity ENCFF953PPE bed narrowPeak conservative idr thresholded peaks ENCSR972ZBV ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF7-human ENCAB000BMO DNA False 2014-07-07 ENCODE 1, 2 ENCFF053GQK, ENCFF419RSJ, ENCFF819OTE, ENCFF926YYG 647883 ENCODE Processing Pipeline 725e0a2fc32ff6a1a6a460b160cb118b https://www.encodeproject.org/files/ENCFF953PPE/@@download/ENCFF953PPE.bed.gz GRCh38 released mild to moderate bottlenecking, moderate library complexity ENCFF389ZHS bigWig fold change over control ENCSR972ZBV ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF7-human ENCAB000BMO DNA False 2014-07-07 ENCODE 1 ENCFF581ZJL, ENCFF796HOG 1449560118 ENCODE Processing Pipeline e6eff121a80032ff7ea75a226c0d30b1 https://www.encodeproject.org/files/ENCFF389ZHS/@@download/ENCFF389ZHS.bigWig hg19 released mild to moderate bottlenecking, moderate library complexity ENCFF709ZFZ bigWig signal p-value ENCSR972ZBV ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF7-human ENCAB000BMO DNA False 2014-07-07 ENCODE 1 ENCFF581ZJL, ENCFF796HOG 1464434180 ENCODE Processing Pipeline 570515b98121e7923d339f1a0d500cfb https://www.encodeproject.org/files/ENCFF709ZFZ/@@download/ENCFF709ZFZ.bigWig hg19 released mild to moderate bottlenecking, moderate library complexity ENCFF611BUY bed narrowPeak peaks ENCSR972ZBV ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF7-human ENCAB000BMO DNA False 2014-07-07 ENCODE 1 ENCFF581ZJL, ENCFF796HOG 7178552 ENCODE Processing Pipeline 0318f8b1097e2c3bce0291956fb04434 https://www.encodeproject.org/files/ENCFF611BUY/@@download/ENCFF611BUY.bed.gz hg19 released mild to moderate bottlenecking, moderate library complexity ENCFF606UFV bed narrowPeak peaks ENCSR972ZBV ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF7-human ENCAB000BMO DNA False 2014-07-07 ENCODE 2 ENCFF051LWI, ENCFF838YGO 6919933 ENCODE Processing Pipeline a4987ffd1ba8dadf8170584cd35048f4 https://www.encodeproject.org/files/ENCFF606UFV/@@download/ENCFF606UFV.bed.gz hg19 released mild to moderate bottlenecking, moderate library complexity ENCFF821WIF bed narrowPeak peaks ENCSR972ZBV ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF7-human ENCAB000BMO DNA False 2014-07-07 ENCODE 1, 2 ENCFF051LWI, ENCFF581ZJL, ENCFF796HOG, ENCFF838YGO 7254053 ENCODE Processing Pipeline c4a226a953fbb7ec3c9a7f9e462228bc https://www.encodeproject.org/files/ENCFF821WIF/@@download/ENCFF821WIF.bed.gz hg19 released mild to moderate bottlenecking, moderate library complexity ENCFF035WOP bigBed narrowPeak peaks ENCSR972ZBV ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF7-human ENCAB000BMO DNA False 2014-07-07 ENCODE 1 ENCFF611BUY 13036122 ENCODE Processing Pipeline 18c39eb0783dd9c380ed575b1afe01ce https://www.encodeproject.org/files/ENCFF035WOP/@@download/ENCFF035WOP.bigBed hg19 released mild to moderate bottlenecking, moderate library complexity ENCFF568YHF bigBed narrowPeak peaks ENCSR972ZBV ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF7-human ENCAB000BMO DNA False 2014-07-07 ENCODE 1, 2 ENCFF821WIF 12993422 ENCODE Processing Pipeline 6dc8e77cd4e9f47630366a43a0412235 https://www.encodeproject.org/files/ENCFF568YHF/@@download/ENCFF568YHF.bigBed hg19 released mild to moderate bottlenecking, moderate library complexity ENCFF446YXS bigBed narrowPeak peaks ENCSR972ZBV ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF7-human ENCAB000BMO DNA False 2014-07-07 ENCODE 2 ENCFF606UFV 13206013 ENCODE Processing Pipeline b376927d2e7ffddb11ecadb93ac4c3fe https://www.encodeproject.org/files/ENCFF446YXS/@@download/ENCFF446YXS.bigBed hg19 released mild to moderate bottlenecking, moderate library complexity ENCFF107YHW bigBed narrowPeak conservative idr thresholded peaks ENCSR972ZBV ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF7-human ENCAB000BMO DNA False 2014-07-07 ENCODE 1, 2 ENCFF280UZU 1230707 ENCODE Processing Pipeline bc7e9a75c9bb0e902a8327b3f4b54dd1 https://www.encodeproject.org/files/ENCFF107YHW/@@download/ENCFF107YHW.bigBed hg19 released mild to moderate bottlenecking, moderate library complexity ENCFF092KSN bigBed narrowPeak optimal idr thresholded peaks ENCSR972ZBV ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF7-human ENCAB000BMO DNA False 2014-07-07 ENCODE 1, 2 ENCFF868QLL 1860903 ENCODE Processing Pipeline 5b600a4b652625d647d66e68972fabac https://www.encodeproject.org/files/ENCFF092KSN/@@download/ENCFF092KSN.bigBed hg19 released mild to moderate bottlenecking, moderate library complexity ENCFF280UZU bed narrowPeak conservative idr thresholded peaks ENCSR972ZBV ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF7-human ENCAB000BMO DNA False 2014-07-07 ENCODE 1, 2 ENCFF001TDO, ENCFF606UFV, ENCFF611BUY, ENCFF821WIF 668756 ENCODE Processing Pipeline 29a05ae846b9d5ee885fdff240d3b342 https://www.encodeproject.org/files/ENCFF280UZU/@@download/ENCFF280UZU.bed.gz hg19 released mild to moderate bottlenecking, moderate library complexity ENCFF868QLL bed narrowPeak optimal idr thresholded peaks ENCSR972ZBV ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF7-human ENCAB000BMO DNA False 2014-07-07 ENCODE 1, 2 ENCFF001TDO, ENCFF606UFV, ENCFF611BUY, ENCFF821WIF 855049 ENCODE Processing Pipeline 96c0eed56cbef77b05a368374d122077 https://www.encodeproject.org/files/ENCFF868QLL/@@download/ENCFF868QLL.bed.gz hg19 released mild to moderate bottlenecking, moderate library complexity ENCFF946FDX bam unfiltered alignments ENCSR142YYA ChIP-seq EFO:0002067 K562 cell line Homo sapiens EWSR1-human ENCAB026YMP DNA False 2018-01-26 ENCODE 1 100 ENCFF605BFZ, ENCFF807MUK, ENCFF824PVS 4998937354 ENCODE Processing Pipeline bf2ae16d91a2e7a80638718d1e9a8d1e https://www.encodeproject.org/files/ENCFF946FDX/@@download/ENCFF946FDX.bam hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF557GGR bam unfiltered alignments ENCSR142YYA ChIP-seq EFO:0002067 K562 cell line Homo sapiens EWSR1-human ENCAB026YMP DNA False 2018-01-26 ENCODE 1 100 ENCFF605BFZ, ENCFF643CGH, ENCFF824PVS 5003621036 ENCODE Processing Pipeline 9f9ef6ed4bd9d8bf93870c1b5d3a7ded https://www.encodeproject.org/files/ENCFF557GGR/@@download/ENCFF557GGR.bam GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF281DML bam unfiltered alignments ENCSR142YYA ChIP-seq EFO:0002067 K562 cell line Homo sapiens EWSR1-human ENCAB026YMP DNA False 2018-01-26 ENCODE 2 100 ENCFF377PHH, ENCFF510HXD, ENCFF643CGH 7376846042 ENCODE Processing Pipeline 47a847676224e387bf6fd7bf03ff118e https://www.encodeproject.org/files/ENCFF281DML/@@download/ENCFF281DML.bam GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF592SCF bam alignments ENCSR142YYA ChIP-seq EFO:0002067 K562 cell line Homo sapiens EWSR1-human ENCAB026YMP DNA False 2018-01-26 ENCODE 1 100 ENCFF605BFZ, ENCFF807MUK, ENCFF824PVS 2988134672 ENCODE Processing Pipeline fefe3bf0477b729c6c09b81902c9d13c https://www.encodeproject.org/files/ENCFF592SCF/@@download/ENCFF592SCF.bam hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF407KJY bam unfiltered alignments ENCSR142YYA ChIP-seq EFO:0002067 K562 cell line Homo sapiens EWSR1-human ENCAB026YMP DNA False 2018-01-26 ENCODE 2 100 ENCFF377PHH, ENCFF510HXD, ENCFF807MUK 7371184801 ENCODE Processing Pipeline e4cab6ccb618dfaa26b5a37dfdb9caf9 https://www.encodeproject.org/files/ENCFF407KJY/@@download/ENCFF407KJY.bam hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF603TYQ bam alignments ENCSR142YYA ChIP-seq EFO:0002067 K562 cell line Homo sapiens EWSR1-human ENCAB026YMP DNA False 2018-01-26 ENCODE 1 100 ENCFF605BFZ, ENCFF643CGH, ENCFF824PVS 2990136770 ENCODE Processing Pipeline 0cc341ffe303c8c1326d91f98ef4aaaf https://www.encodeproject.org/files/ENCFF603TYQ/@@download/ENCFF603TYQ.bam GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF574VVE bam alignments ENCSR142YYA ChIP-seq EFO:0002067 K562 cell line Homo sapiens EWSR1-human ENCAB026YMP DNA False 2018-01-26 ENCODE 2 100 ENCFF377PHH, ENCFF510HXD, ENCFF807MUK 4824173505 ENCODE Processing Pipeline ef014e0af42b5708ec9d8245a82724da https://www.encodeproject.org/files/ENCFF574VVE/@@download/ENCFF574VVE.bam hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF753YTV bam alignments ENCSR142YYA ChIP-seq EFO:0002067 K562 cell line Homo sapiens EWSR1-human ENCAB026YMP DNA False 2018-01-26 ENCODE 2 100 ENCFF377PHH, ENCFF510HXD, ENCFF643CGH 4828094526 ENCODE Processing Pipeline 28dd25c5513dd94a32b407a41e8b9e5a https://www.encodeproject.org/files/ENCFF753YTV/@@download/ENCFF753YTV.bam GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF619XZH bigWig signal p-value ENCSR142YYA ChIP-seq EFO:0002067 K562 cell line Homo sapiens EWSR1-human ENCAB026YMP DNA False 2018-01-26 ENCODE 1 ENCFF592SCF, ENCFF834TUP 929381415 ENCODE Processing Pipeline ef752b9c1e80a2345b3825c328e5355d https://www.encodeproject.org/files/ENCFF619XZH/@@download/ENCFF619XZH.bigWig hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF203LVZ bigWig signal p-value ENCSR142YYA ChIP-seq EFO:0002067 K562 cell line Homo sapiens EWSR1-human ENCAB026YMP DNA False 2018-01-26 ENCODE 2 ENCFF160VXC, ENCFF574VVE, ENCFF834TUP 1483115001 ENCODE Processing Pipeline d5a6dec3986460ae4882787a238b3468 https://www.encodeproject.org/files/ENCFF203LVZ/@@download/ENCFF203LVZ.bigWig hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF664OEY bigWig signal p-value ENCSR142YYA ChIP-seq EFO:0002067 K562 cell line Homo sapiens EWSR1-human ENCAB026YMP DNA False 2018-01-26 ENCODE 1, 2 ENCFF160VXC, ENCFF574VVE, ENCFF592SCF, ENCFF834TUP 1905956047 ENCODE Processing Pipeline 06ffd47bdbf36b4b8162153628ee82c2 https://www.encodeproject.org/files/ENCFF664OEY/@@download/ENCFF664OEY.bigWig hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF317HYO bigWig fold change over control ENCSR142YYA ChIP-seq EFO:0002067 K562 cell line Homo sapiens EWSR1-human ENCAB026YMP DNA False 2018-01-26 ENCODE 1 ENCFF592SCF, ENCFF834TUP 1066962101 ENCODE Processing Pipeline 4bc1765f9c980ca22f8f3750b528e179 https://www.encodeproject.org/files/ENCFF317HYO/@@download/ENCFF317HYO.bigWig hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF452MHB bigWig fold change over control ENCSR142YYA ChIP-seq EFO:0002067 K562 cell line Homo sapiens EWSR1-human ENCAB026YMP DNA False 2018-01-26 ENCODE 2 ENCFF160VXC, ENCFF574VVE, ENCFF834TUP 1947048582 ENCODE Processing Pipeline 5addca65eff80aca5825e190cd7430db https://www.encodeproject.org/files/ENCFF452MHB/@@download/ENCFF452MHB.bigWig hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF875OWQ bigWig fold change over control ENCSR142YYA ChIP-seq EFO:0002067 K562 cell line Homo sapiens EWSR1-human ENCAB026YMP DNA False 2018-01-26 ENCODE 1, 2 ENCFF160VXC, ENCFF574VVE, ENCFF592SCF, ENCFF834TUP 2252468688 ENCODE Processing Pipeline 76f68f7fc7ef1634b6cb556ad13eae16 https://www.encodeproject.org/files/ENCFF875OWQ/@@download/ENCFF875OWQ.bigWig hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF552VIT bed narrowPeak peaks ENCSR142YYA ChIP-seq EFO:0002067 K562 cell line Homo sapiens EWSR1-human ENCAB026YMP DNA False 2018-01-26 ENCODE 1 ENCFF592SCF, ENCFF834TUP 6153758 ENCODE Processing Pipeline e0c6f5872a6ab62f22c4015014fdef3c https://www.encodeproject.org/files/ENCFF552VIT/@@download/ENCFF552VIT.bed.gz hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF789TXE bed narrowPeak peaks ENCSR142YYA ChIP-seq EFO:0002067 K562 cell line Homo sapiens EWSR1-human ENCAB026YMP DNA False 2018-01-26 ENCODE 2 ENCFF160VXC, ENCFF574VVE, ENCFF834TUP 6766713 ENCODE Processing Pipeline aae04d472a2b3903a8809739fb6c9195 https://www.encodeproject.org/files/ENCFF789TXE/@@download/ENCFF789TXE.bed.gz hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF874KMM bed narrowPeak peaks ENCSR142YYA ChIP-seq EFO:0002067 K562 cell line Homo sapiens EWSR1-human ENCAB026YMP DNA False 2018-01-26 ENCODE 1, 2 ENCFF160VXC, ENCFF574VVE, ENCFF592SCF, ENCFF834TUP 7065247 ENCODE Processing Pipeline f8814c2f996dbe02e85b0fc6bf635d35 https://www.encodeproject.org/files/ENCFF874KMM/@@download/ENCFF874KMM.bed.gz hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF319KAM bigBed narrowPeak peaks ENCSR142YYA ChIP-seq EFO:0002067 K562 cell line Homo sapiens EWSR1-human ENCAB026YMP DNA False 2018-01-26 ENCODE 2 ENCFF789TXE 11128469 ENCODE Processing Pipeline d7152eb34157df79939152e8f81a8d2b https://www.encodeproject.org/files/ENCFF319KAM/@@download/ENCFF319KAM.bigBed hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF741XCW bigBed narrowPeak peaks ENCSR142YYA ChIP-seq EFO:0002067 K562 cell line Homo sapiens EWSR1-human ENCAB026YMP DNA False 2018-01-26 ENCODE 1, 2 ENCFF874KMM 11008348 ENCODE Processing Pipeline d1b9a23a3dcc761872f743c943286912 https://www.encodeproject.org/files/ENCFF741XCW/@@download/ENCFF741XCW.bigBed hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF414CVQ bed narrowPeak conservative idr thresholded peaks ENCSR142YYA ChIP-seq EFO:0002067 K562 cell line Homo sapiens EWSR1-human ENCAB026YMP DNA False 2018-01-26 ENCODE 1, 2 ENCFF001TDO, ENCFF552VIT, ENCFF789TXE, ENCFF874KMM 18343 ENCODE Processing Pipeline 0ec7547bab294e9a96444b03c365e312 https://www.encodeproject.org/files/ENCFF414CVQ/@@download/ENCFF414CVQ.bed.gz hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF006FDS bigBed narrowPeak peaks ENCSR142YYA ChIP-seq EFO:0002067 K562 cell line Homo sapiens EWSR1-human ENCAB026YMP DNA False 2018-01-26 ENCODE 1 ENCFF552VIT 11181990 ENCODE Processing Pipeline e4bd7ba383706e44acbecacb92673934 https://www.encodeproject.org/files/ENCFF006FDS/@@download/ENCFF006FDS.bigBed hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF791DYM bigBed narrowPeak conservative idr thresholded peaks ENCSR142YYA ChIP-seq EFO:0002067 K562 cell line Homo sapiens EWSR1-human ENCAB026YMP DNA False 2018-01-26 ENCODE 1, 2 ENCFF414CVQ 107568 ENCODE Processing Pipeline 297f1a9133df94ed35b766745e383d19 https://www.encodeproject.org/files/ENCFF791DYM/@@download/ENCFF791DYM.bigBed hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF820EVZ bed narrowPeak optimal idr thresholded peaks ENCSR142YYA ChIP-seq EFO:0002067 K562 cell line Homo sapiens EWSR1-human ENCAB026YMP DNA False 2018-01-26 ENCODE 1, 2 ENCFF001TDO, ENCFF552VIT, ENCFF789TXE, ENCFF874KMM 34572 ENCODE Processing Pipeline b8fa23f2583309d50424112c5abc17ab https://www.encodeproject.org/files/ENCFF820EVZ/@@download/ENCFF820EVZ.bed.gz hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF696ZWU bigBed narrowPeak optimal idr thresholded peaks ENCSR142YYA ChIP-seq EFO:0002067 K562 cell line Homo sapiens EWSR1-human ENCAB026YMP DNA False 2018-01-26 ENCODE 1, 2 ENCFF820EVZ 143814 ENCODE Processing Pipeline d08b9e1d2c1b4dfc00eafff3d7bdb03e https://www.encodeproject.org/files/ENCFF696ZWU/@@download/ENCFF696ZWU.bigBed hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF856QMZ bigWig signal p-value ENCSR142YYA ChIP-seq EFO:0002067 K562 cell line Homo sapiens EWSR1-human ENCAB026YMP DNA False 2018-01-26 ENCODE 1 ENCFF603TYQ, ENCFF712WXB 910412388 ENCODE Processing Pipeline f4070e88af5199292276befc7c7d30a6 https://www.encodeproject.org/files/ENCFF856QMZ/@@download/ENCFF856QMZ.bigWig GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF063XJK bigWig signal p-value ENCSR142YYA ChIP-seq EFO:0002067 K562 cell line Homo sapiens EWSR1-human ENCAB026YMP DNA False 2018-01-26 ENCODE 2 ENCFF712WXB, ENCFF753YTV, ENCFF790TAN 1491848735 ENCODE Processing Pipeline 6ffcdd0ec22aa0bfd13a8316885b4f89 https://www.encodeproject.org/files/ENCFF063XJK/@@download/ENCFF063XJK.bigWig GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF313RIN bigWig signal p-value ENCSR142YYA ChIP-seq EFO:0002067 K562 cell line Homo sapiens EWSR1-human ENCAB026YMP DNA False 2018-01-26 ENCODE 1, 2 ENCFF603TYQ, ENCFF712WXB, ENCFF753YTV, ENCFF790TAN 1891768500 ENCODE Processing Pipeline ddf630f40e3170794486db9c064b9d5a https://www.encodeproject.org/files/ENCFF313RIN/@@download/ENCFF313RIN.bigWig GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF223MGE bigWig fold change over control ENCSR142YYA ChIP-seq EFO:0002067 K562 cell line Homo sapiens EWSR1-human ENCAB026YMP DNA False 2018-01-26 ENCODE 1 ENCFF603TYQ, ENCFF712WXB 1045985533 ENCODE Processing Pipeline c0dc2b60532e5027f2b24419d4c745c1 https://www.encodeproject.org/files/ENCFF223MGE/@@download/ENCFF223MGE.bigWig GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF895LIT bigWig fold change over control ENCSR142YYA ChIP-seq EFO:0002067 K562 cell line Homo sapiens EWSR1-human ENCAB026YMP DNA False 2018-01-26 ENCODE 2 ENCFF712WXB, ENCFF753YTV, ENCFF790TAN 1946065791 ENCODE Processing Pipeline b8ea8ec2428988e8fb8016efbb8a9add https://www.encodeproject.org/files/ENCFF895LIT/@@download/ENCFF895LIT.bigWig GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF786YHA bigWig fold change over control ENCSR142YYA ChIP-seq EFO:0002067 K562 cell line Homo sapiens EWSR1-human ENCAB026YMP DNA False 2018-01-26 ENCODE 1, 2 ENCFF603TYQ, ENCFF712WXB, ENCFF753YTV, ENCFF790TAN 2254129911 ENCODE Processing Pipeline cf2c83effd43d898883ebf6ba94155bf https://www.encodeproject.org/files/ENCFF786YHA/@@download/ENCFF786YHA.bigWig GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF347FDY bed narrowPeak peaks ENCSR142YYA ChIP-seq EFO:0002067 K562 cell line Homo sapiens EWSR1-human ENCAB026YMP DNA False 2018-01-26 ENCODE 1 ENCFF603TYQ, ENCFF712WXB 5987772 ENCODE Processing Pipeline a8f1df57fc633822ba6b1269c0595a40 https://www.encodeproject.org/files/ENCFF347FDY/@@download/ENCFF347FDY.bed.gz GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF681WSX bed narrowPeak peaks ENCSR142YYA ChIP-seq EFO:0002067 K562 cell line Homo sapiens EWSR1-human ENCAB026YMP DNA False 2018-01-26 ENCODE 2 ENCFF712WXB, ENCFF753YTV, ENCFF790TAN 6651072 ENCODE Processing Pipeline 429a494f3e93afb63014f6aed0b504b4 https://www.encodeproject.org/files/ENCFF681WSX/@@download/ENCFF681WSX.bed.gz GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF709XJG bed narrowPeak conservative idr thresholded peaks ENCSR142YYA ChIP-seq EFO:0002067 K562 cell line Homo sapiens EWSR1-human ENCAB026YMP DNA False 2018-01-26 ENCODE 1, 2 ENCFF347FDY, ENCFF418KWK, ENCFF419RSJ, ENCFF681WSX 19048 ENCODE Processing Pipeline 1dd3fcd9157fe2d36fc44033f9912e03 https://www.encodeproject.org/files/ENCFF709XJG/@@download/ENCFF709XJG.bed.gz GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF955OIH bigBed narrowPeak optimal idr thresholded peaks ENCSR142YYA ChIP-seq EFO:0002067 K562 cell line Homo sapiens EWSR1-human ENCAB026YMP DNA False 2018-01-26 ENCODE 1, 2 ENCFF560CYG 144925 ENCODE Processing Pipeline 891d45285a4b7ce103f4395890a0c909 https://www.encodeproject.org/files/ENCFF955OIH/@@download/ENCFF955OIH.bigBed GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF320DZS bigBed narrowPeak peaks ENCSR142YYA ChIP-seq EFO:0002067 K562 cell line Homo sapiens EWSR1-human ENCAB026YMP DNA False 2018-01-26 ENCODE 1 ENCFF347FDY 11175181 ENCODE Processing Pipeline 45f1c2cdac24b2fabcc1e1912822a1aa https://www.encodeproject.org/files/ENCFF320DZS/@@download/ENCFF320DZS.bigBed GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF550NJI bigBed narrowPeak peaks ENCSR142YYA ChIP-seq EFO:0002067 K562 cell line Homo sapiens EWSR1-human ENCAB026YMP DNA False 2018-01-26 ENCODE 2 ENCFF681WSX 11141367 ENCODE Processing Pipeline 861907d1d021702cf661620d4db97499 https://www.encodeproject.org/files/ENCFF550NJI/@@download/ENCFF550NJI.bigBed GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF351NIP bigBed narrowPeak peaks ENCSR142YYA ChIP-seq EFO:0002067 K562 cell line Homo sapiens EWSR1-human ENCAB026YMP DNA False 2018-01-26 ENCODE 1, 2 ENCFF418KWK 11026907 ENCODE Processing Pipeline 31d949ec3ceb2e5533c9caf52cc94f3a https://www.encodeproject.org/files/ENCFF351NIP/@@download/ENCFF351NIP.bigBed GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF418KWK bed narrowPeak peaks ENCSR142YYA ChIP-seq EFO:0002067 K562 cell line Homo sapiens EWSR1-human ENCAB026YMP DNA False 2018-01-26 ENCODE 1, 2 ENCFF603TYQ, ENCFF712WXB, ENCFF753YTV, ENCFF790TAN 7007162 ENCODE Processing Pipeline 81f0b714a9aaaf07e5420236f7eb7a20 https://www.encodeproject.org/files/ENCFF418KWK/@@download/ENCFF418KWK.bed.gz GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF696ZOA bigBed narrowPeak conservative idr thresholded peaks ENCSR142YYA ChIP-seq EFO:0002067 K562 cell line Homo sapiens EWSR1-human ENCAB026YMP DNA False 2018-01-26 ENCODE 1, 2 ENCFF709XJG 110933 ENCODE Processing Pipeline b9a986c50ded5d55205abf94fd16133a https://www.encodeproject.org/files/ENCFF696ZOA/@@download/ENCFF696ZOA.bigBed GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF560CYG bed narrowPeak optimal idr thresholded peaks ENCSR142YYA ChIP-seq EFO:0002067 K562 cell line Homo sapiens EWSR1-human ENCAB026YMP DNA False 2018-01-26 ENCODE 1, 2 ENCFF347FDY, ENCFF418KWK, ENCFF419RSJ, ENCFF681WSX 33773 ENCODE Processing Pipeline 6ac479779ece67e788db86fc14ae5733 https://www.encodeproject.org/files/ENCFF560CYG/@@download/ENCFF560CYG.bed.gz GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF377PHH fastq reads ENCSR142YYA ChIP-seq EFO:0002067 K562 cell line Homo sapiens EWSR1-human ENCAB026YMP DNA False 2018-01-26 ENCODE 2 1 100 paired-ended 2 ENCFF510HXD 4113270729 Michael Snyder, Stanford 4597f1349710233461f614269c716a3c https://www.encodeproject.org/files/ENCFF377PHH/@@download/ENCFF377PHH.fastq.gz Illumina HiSeq 4000 /files/ENCFF837MIV/ released borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF824PVS fastq reads ENCSR142YYA ChIP-seq EFO:0002067 K562 cell line Homo sapiens EWSR1-human ENCAB026YMP DNA False 2018-01-26 ENCODE 1 1 100 paired-ended 1 ENCFF605BFZ 2514236277 Michael Snyder, Stanford 3204009bb7871c50d838d541153c01a2 https://www.encodeproject.org/files/ENCFF824PVS/@@download/ENCFF824PVS.fastq.gz Illumina HiSeq 4000 /files/ENCFF498JMO/ released borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF605BFZ fastq reads ENCSR142YYA ChIP-seq EFO:0002067 K562 cell line Homo sapiens EWSR1-human ENCAB026YMP DNA False 2018-01-26 ENCODE 1 1 100 paired-ended 2 ENCFF824PVS 2560911903 Michael Snyder, Stanford d71b2c378997d818afb721da84d234b4 https://www.encodeproject.org/files/ENCFF605BFZ/@@download/ENCFF605BFZ.fastq.gz Illumina HiSeq 4000 /files/ENCFF502GTS/ released borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF510HXD fastq reads ENCSR142YYA ChIP-seq EFO:0002067 K562 cell line Homo sapiens EWSR1-human ENCAB026YMP DNA False 2018-01-26 ENCODE 2 1 100 paired-ended 1 ENCFF377PHH 3834222265 Michael Snyder, Stanford 61647403d432158dfc342ed014936087 https://www.encodeproject.org/files/ENCFF510HXD/@@download/ENCFF510HXD.fastq.gz Illumina HiSeq 4000 /files/ENCFF259GQA/ released borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF863CUG bam unfiltered alignments ENCSR315NNL ChIP-seq EFO:0002067 K562 cell line Homo sapiens CHAMP1-human ENCAB469ASP DNA False 2017-11-14 ENCODE 1 100 ENCFF389LWM, ENCFF807MUK, ENCFF878ZAA 4337518963 ENCODE Processing Pipeline 78d55f44de161c91f6b224a3d740ca87 https://www.encodeproject.org/files/ENCFF863CUG/@@download/ENCFF863CUG.bam hg19 released low read depth experiment not submitted to GEO ENCFF878ZAA fastq reads ENCSR315NNL ChIP-seq EFO:0002067 K562 cell line Homo sapiens CHAMP1-human ENCAB469ASP DNA False 2017-11-14 ENCODE 1 1 100 paired-ended 2 ENCFF389LWM 1977695418 Michael Snyder, Stanford 2948b58b9c0d4e300500460549fe3dca https://www.encodeproject.org/files/ENCFF878ZAA/@@download/ENCFF878ZAA.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFH/ released low read depth experiment not submitted to GEO ENCFF389LWM fastq reads ENCSR315NNL ChIP-seq EFO:0002067 K562 cell line Homo sapiens CHAMP1-human ENCAB469ASP DNA False 2017-11-14 ENCODE 1 1 100 paired-ended 1 ENCFF878ZAA 1939918841 Michael Snyder, Stanford 74b66e0216a34497470efa83f994a6c1 https://www.encodeproject.org/files/ENCFF389LWM/@@download/ENCFF389LWM.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFF/ released low read depth experiment not submitted to GEO ENCFF537OYZ bam alignments ENCSR315NNL ChIP-seq EFO:0002067 K562 cell line Homo sapiens CHAMP1-human ENCAB469ASP DNA False 2017-11-14 ENCODE 1 100 ENCFF389LWM, ENCFF807MUK, ENCFF878ZAA 3546713231 ENCODE Processing Pipeline 95dc36e9e0006d63fc331eec778476d6 https://www.encodeproject.org/files/ENCFF537OYZ/@@download/ENCFF537OYZ.bam hg19 released low read depth experiment not submitted to GEO ENCFF745JUW fastq reads ENCSR315NNL ChIP-seq EFO:0002067 K562 cell line Homo sapiens CHAMP1-human ENCAB469ASP DNA False 2017-11-14 ENCODE 3 1 101 paired-ended 1 ENCFF273PTZ 3729633149 Michael Snyder, Stanford 356581762f50a9a1fccad26266a8a47e https://www.encodeproject.org/files/ENCFF745JUW/@@download/ENCFF745JUW.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFD/ released low read depth experiment not submitted to GEO ENCFF273PTZ fastq reads ENCSR315NNL ChIP-seq EFO:0002067 K562 cell line Homo sapiens CHAMP1-human ENCAB469ASP DNA False 2017-11-14 ENCODE 3 1 101 paired-ended 2 ENCFF745JUW 3721536401 Michael Snyder, Stanford 4355f9830d0682711912405d4f2e3dde https://www.encodeproject.org/files/ENCFF273PTZ/@@download/ENCFF273PTZ.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFA/ released low read depth experiment not submitted to GEO ENCFF300MIW bam unfiltered alignments ENCSR315NNL ChIP-seq EFO:0002067 K562 cell line Homo sapiens CHAMP1-human ENCAB469ASP DNA False 2017-11-14 ENCODE 1 100 ENCFF389LWM, ENCFF643CGH, ENCFF878ZAA 4343437997 ENCODE Processing Pipeline c8b3be0bf966a5e1006a1663a65e03d4 https://www.encodeproject.org/files/ENCFF300MIW/@@download/ENCFF300MIW.bam GRCh38 released low read depth experiment not submitted to GEO ENCFF638KFU bam alignments ENCSR315NNL ChIP-seq EFO:0002067 K562 cell line Homo sapiens CHAMP1-human ENCAB469ASP DNA False 2017-11-14 ENCODE 1 100 ENCFF389LWM, ENCFF643CGH, ENCFF878ZAA 3551050507 ENCODE Processing Pipeline 9e3b3635a0c74f9ba63afb45bfdf3c6d https://www.encodeproject.org/files/ENCFF638KFU/@@download/ENCFF638KFU.bam GRCh38 released low read depth experiment not submitted to GEO ENCFF550FBR bam unfiltered alignments ENCSR315NNL ChIP-seq EFO:0002067 K562 cell line Homo sapiens CHAMP1-human ENCAB469ASP DNA False 2017-11-14 ENCODE 3 101 ENCFF273PTZ, ENCFF745JUW, ENCFF807MUK 7112478300 ENCODE Processing Pipeline 11993ccd6b10720300d527679994b736 https://www.encodeproject.org/files/ENCFF550FBR/@@download/ENCFF550FBR.bam hg19 released low read depth experiment not submitted to GEO ENCFF333ULF bam unfiltered alignments ENCSR315NNL ChIP-seq EFO:0002067 K562 cell line Homo sapiens CHAMP1-human ENCAB469ASP DNA False 2017-11-14 ENCODE 3 101 ENCFF273PTZ, ENCFF643CGH, ENCFF745JUW 7120809604 ENCODE Processing Pipeline 9b71c813bc585ec5a43868b02e4d6b8e https://www.encodeproject.org/files/ENCFF333ULF/@@download/ENCFF333ULF.bam GRCh38 released low read depth experiment not submitted to GEO ENCFF592CXW bam alignments ENCSR315NNL ChIP-seq EFO:0002067 K562 cell line Homo sapiens CHAMP1-human ENCAB469ASP DNA False 2017-11-14 ENCODE 3 101 ENCFF273PTZ, ENCFF745JUW, ENCFF807MUK 6171928984 ENCODE Processing Pipeline b70d001a74e212ef43db837140333dee https://www.encodeproject.org/files/ENCFF592CXW/@@download/ENCFF592CXW.bam hg19 released low read depth experiment not submitted to GEO ENCFF411GKL bam alignments ENCSR315NNL ChIP-seq EFO:0002067 K562 cell line Homo sapiens CHAMP1-human ENCAB469ASP DNA False 2017-11-14 ENCODE 3 101 ENCFF273PTZ, ENCFF643CGH, ENCFF745JUW 6173189255 ENCODE Processing Pipeline ccf1217f2c30b7b4ce84734a30c04ed8 https://www.encodeproject.org/files/ENCFF411GKL/@@download/ENCFF411GKL.bam GRCh38 released low read depth experiment not submitted to GEO ENCFF658FTO bigBed narrowPeak peaks ENCSR315NNL ChIP-seq EFO:0002067 K562 cell line Homo sapiens CHAMP1-human ENCAB469ASP DNA False 2017-11-14 ENCODE 3 ENCFF408WGV 11219549 ENCODE Processing Pipeline de296bfe05e405111a4a22588f3f1745 https://www.encodeproject.org/files/ENCFF658FTO/@@download/ENCFF658FTO.bigBed GRCh38 released low read depth experiment not submitted to GEO ENCFF460ZTX bigBed narrowPeak conservative idr thresholded peaks ENCSR315NNL ChIP-seq EFO:0002067 K562 cell line Homo sapiens CHAMP1-human ENCAB469ASP DNA False 2017-11-14 ENCODE 1, 3 ENCFF146FGH 202342 ENCODE Processing Pipeline 3de2f68bc8ebf1b706f1342339c791d8 https://www.encodeproject.org/files/ENCFF460ZTX/@@download/ENCFF460ZTX.bigBed GRCh38 released low read depth experiment not submitted to GEO ENCFF267XOA bigWig signal p-value ENCSR315NNL ChIP-seq EFO:0002067 K562 cell line Homo sapiens CHAMP1-human ENCAB469ASP DNA False 2017-11-14 ENCODE 1, 3 ENCFF227IZS, ENCFF411GKL, ENCFF638KFU, ENCFF910IKB 1894201788 ENCODE Processing Pipeline e23b87c43df04e208316b037d344041d https://www.encodeproject.org/files/ENCFF267XOA/@@download/ENCFF267XOA.bigWig GRCh38 released low read depth experiment not submitted to GEO ENCFF776LMR bigBed narrowPeak optimal idr thresholded peaks ENCSR315NNL ChIP-seq EFO:0002067 K562 cell line Homo sapiens CHAMP1-human ENCAB469ASP DNA False 2017-11-14 ENCODE 1, 3 ENCFF919KNQ 275483 ENCODE Processing Pipeline 4bb883eaa6a138c845532b2464b13919 https://www.encodeproject.org/files/ENCFF776LMR/@@download/ENCFF776LMR.bigBed GRCh38 released low read depth experiment not submitted to GEO ENCFF076DCA bigWig signal p-value ENCSR315NNL ChIP-seq EFO:0002067 K562 cell line Homo sapiens CHAMP1-human ENCAB469ASP DNA False 2017-11-14 ENCODE 1 ENCFF638KFU, ENCFF910IKB 1111255694 ENCODE Processing Pipeline 0175c424c87d4055366f02d5c577d03a https://www.encodeproject.org/files/ENCFF076DCA/@@download/ENCFF076DCA.bigWig GRCh38 released low read depth experiment not submitted to GEO ENCFF126LQE bed narrowPeak peaks ENCSR315NNL ChIP-seq EFO:0002067 K562 cell line Homo sapiens CHAMP1-human ENCAB469ASP DNA False 2017-11-14 ENCODE 1, 3 ENCFF227IZS, ENCFF411GKL, ENCFF638KFU, ENCFF910IKB 7150844 ENCODE Processing Pipeline 98e3b60f8451b79717661d56c3978b8e https://www.encodeproject.org/files/ENCFF126LQE/@@download/ENCFF126LQE.bed.gz GRCh38 released low read depth experiment not submitted to GEO ENCFF851ZVQ bigWig signal p-value ENCSR315NNL ChIP-seq EFO:0002067 K562 cell line Homo sapiens CHAMP1-human ENCAB469ASP DNA False 2017-11-14 ENCODE 3 ENCFF227IZS, ENCFF411GKL, ENCFF910IKB 1627874801 ENCODE Processing Pipeline a9d5ed736fbd96d9ad3b518ba240823b https://www.encodeproject.org/files/ENCFF851ZVQ/@@download/ENCFF851ZVQ.bigWig GRCh38 released low read depth experiment not submitted to GEO ENCFF919KNQ bed narrowPeak optimal idr thresholded peaks ENCSR315NNL ChIP-seq EFO:0002067 K562 cell line Homo sapiens CHAMP1-human ENCAB469ASP DNA False 2017-11-14 ENCODE 1, 3 ENCFF126LQE, ENCFF408WGV, ENCFF419RSJ, ENCFF667XAA 127271 ENCODE Processing Pipeline ed5c069351774948a45f219c7d43c0ae https://www.encodeproject.org/files/ENCFF919KNQ/@@download/ENCFF919KNQ.bed.gz GRCh38 released low read depth experiment not submitted to GEO ENCFF478HTH bigWig fold change over control ENCSR315NNL ChIP-seq EFO:0002067 K562 cell line Homo sapiens CHAMP1-human ENCAB469ASP DNA False 2017-11-14 ENCODE 1 ENCFF638KFU, ENCFF910IKB 1082961155 ENCODE Processing Pipeline e5b47b2627f05d2ad3a9550ab86d8060 https://www.encodeproject.org/files/ENCFF478HTH/@@download/ENCFF478HTH.bigWig GRCh38 released low read depth experiment not submitted to GEO ENCFF354ZUG bigWig fold change over control ENCSR315NNL ChIP-seq EFO:0002067 K562 cell line Homo sapiens CHAMP1-human ENCAB469ASP DNA False 2017-11-14 ENCODE 3 ENCFF227IZS, ENCFF411GKL, ENCFF910IKB 1907727783 ENCODE Processing Pipeline b9ccc99d114d81b0ccec3cc31d3bbfa3 https://www.encodeproject.org/files/ENCFF354ZUG/@@download/ENCFF354ZUG.bigWig GRCh38 released low read depth experiment not submitted to GEO ENCFF819HQT bigWig fold change over control ENCSR315NNL ChIP-seq EFO:0002067 K562 cell line Homo sapiens CHAMP1-human ENCAB469ASP DNA False 2017-11-14 ENCODE 1, 3 ENCFF227IZS, ENCFF411GKL, ENCFF638KFU, ENCFF910IKB 2232329660 ENCODE Processing Pipeline dd5edefa388cd93b2c6f40dc01582d35 https://www.encodeproject.org/files/ENCFF819HQT/@@download/ENCFF819HQT.bigWig GRCh38 released low read depth experiment not submitted to GEO ENCFF667XAA bed narrowPeak peaks ENCSR315NNL ChIP-seq EFO:0002067 K562 cell line Homo sapiens CHAMP1-human ENCAB469ASP DNA False 2017-11-14 ENCODE 1 ENCFF638KFU, ENCFF910IKB 6110032 ENCODE Processing Pipeline e24be2297121da94f29c2b760f3786e5 https://www.encodeproject.org/files/ENCFF667XAA/@@download/ENCFF667XAA.bed.gz GRCh38 released low read depth experiment not submitted to GEO ENCFF408WGV bed narrowPeak peaks ENCSR315NNL ChIP-seq EFO:0002067 K562 cell line Homo sapiens CHAMP1-human ENCAB469ASP DNA False 2017-11-14 ENCODE 3 ENCFF227IZS, ENCFF411GKL, ENCFF910IKB 6878567 ENCODE Processing Pipeline 45780eb7b5c67638d88290c9ca8b074b https://www.encodeproject.org/files/ENCFF408WGV/@@download/ENCFF408WGV.bed.gz GRCh38 released low read depth experiment not submitted to GEO ENCFF617YBX bigBed narrowPeak peaks ENCSR315NNL ChIP-seq EFO:0002067 K562 cell line Homo sapiens CHAMP1-human ENCAB469ASP DNA False 2017-11-14 ENCODE 1 ENCFF667XAA 11287615 ENCODE Processing Pipeline ecb5c47412973ec28c30e5d99dd8a9e7 https://www.encodeproject.org/files/ENCFF617YBX/@@download/ENCFF617YBX.bigBed GRCh38 released low read depth experiment not submitted to GEO ENCFF126WRM bigBed narrowPeak peaks ENCSR315NNL ChIP-seq EFO:0002067 K562 cell line Homo sapiens CHAMP1-human ENCAB469ASP DNA False 2017-11-14 ENCODE 1, 3 ENCFF126LQE 13247091 ENCODE Processing Pipeline 012b4209d628858ef4307d1ee179eeaf https://www.encodeproject.org/files/ENCFF126WRM/@@download/ENCFF126WRM.bigBed GRCh38 released low read depth experiment not submitted to GEO ENCFF146FGH bed narrowPeak conservative idr thresholded peaks ENCSR315NNL ChIP-seq EFO:0002067 K562 cell line Homo sapiens CHAMP1-human ENCAB469ASP DNA False 2017-11-14 ENCODE 1, 3 ENCFF126LQE, ENCFF408WGV, ENCFF419RSJ, ENCFF667XAA 79386 ENCODE Processing Pipeline 8f602afac6504f78773b50e2aa11eb91 https://www.encodeproject.org/files/ENCFF146FGH/@@download/ENCFF146FGH.bed.gz GRCh38 released low read depth experiment not submitted to GEO ENCFF689MDM bed narrowPeak peaks ENCSR315NNL ChIP-seq EFO:0002067 K562 cell line Homo sapiens CHAMP1-human ENCAB469ASP DNA False 2017-11-14 ENCODE 1 ENCFF537OYZ, ENCFF581ZJL 6112109 ENCODE Processing Pipeline ba9ba9833b4606e9d3debe09a73a6551 https://www.encodeproject.org/files/ENCFF689MDM/@@download/ENCFF689MDM.bed.gz hg19 released low read depth experiment not submitted to GEO ENCFF131TQV bed narrowPeak conservative idr thresholded peaks ENCSR315NNL ChIP-seq EFO:0002067 K562 cell line Homo sapiens CHAMP1-human ENCAB469ASP DNA False 2017-11-14 ENCODE 1, 3 ENCFF001TDO, ENCFF363BOT, ENCFF553YOE, ENCFF689MDM 79082 ENCODE Processing Pipeline c07f7bfa27009dfa7107bf7e38680350 https://www.encodeproject.org/files/ENCFF131TQV/@@download/ENCFF131TQV.bed.gz hg19 released low read depth experiment not submitted to GEO ENCFF991BTH bigWig signal p-value ENCSR315NNL ChIP-seq EFO:0002067 K562 cell line Homo sapiens CHAMP1-human ENCAB469ASP DNA False 2017-11-14 ENCODE 3 ENCFF051LWI, ENCFF581ZJL, ENCFF592CXW 1847690633 ENCODE Processing Pipeline 9046ebcccfda44041e81e29438c87662 https://www.encodeproject.org/files/ENCFF991BTH/@@download/ENCFF991BTH.bigWig hg19 released low read depth experiment not submitted to GEO ENCFF123PMM bigBed narrowPeak peaks ENCSR315NNL ChIP-seq EFO:0002067 K562 cell line Homo sapiens CHAMP1-human ENCAB469ASP DNA False 2017-11-14 ENCODE 1 ENCFF689MDM 11273502 ENCODE Processing Pipeline 7e940803583961cab49719ce8a2b446c https://www.encodeproject.org/files/ENCFF123PMM/@@download/ENCFF123PMM.bigBed hg19 released low read depth experiment not submitted to GEO ENCFF553YOE bed narrowPeak peaks ENCSR315NNL ChIP-seq EFO:0002067 K562 cell line Homo sapiens CHAMP1-human ENCAB469ASP DNA False 2017-11-14 ENCODE 3 ENCFF051LWI, ENCFF581ZJL, ENCFF592CXW 6877299 ENCODE Processing Pipeline 2122823fc7452aab434f82f1125070f4 https://www.encodeproject.org/files/ENCFF553YOE/@@download/ENCFF553YOE.bed.gz hg19 released low read depth experiment not submitted to GEO ENCFF448WLP bigBed narrowPeak conservative idr thresholded peaks ENCSR315NNL ChIP-seq EFO:0002067 K562 cell line Homo sapiens CHAMP1-human ENCAB469ASP DNA False 2017-11-14 ENCODE 1, 3 ENCFF131TQV 201666 ENCODE Processing Pipeline ffc34a214d5179fa2f18ace43e2eb83d https://www.encodeproject.org/files/ENCFF448WLP/@@download/ENCFF448WLP.bigBed hg19 released low read depth experiment not submitted to GEO ENCFF255EIV bigBed narrowPeak optimal idr thresholded peaks ENCSR315NNL ChIP-seq EFO:0002067 K562 cell line Homo sapiens CHAMP1-human ENCAB469ASP DNA False 2017-11-14 ENCODE 1, 3 ENCFF602FRL 276384 ENCODE Processing Pipeline c4ac2f5b41c0144a8367cf5a4bf7fe61 https://www.encodeproject.org/files/ENCFF255EIV/@@download/ENCFF255EIV.bigBed hg19 released low read depth experiment not submitted to GEO ENCFF813SYI bigWig signal p-value ENCSR315NNL ChIP-seq EFO:0002067 K562 cell line Homo sapiens CHAMP1-human ENCAB469ASP DNA False 2017-11-14 ENCODE 1, 3 ENCFF051LWI, ENCFF537OYZ, ENCFF581ZJL, ENCFF592CXW 1949089528 ENCODE Processing Pipeline 21ac93d4b45f3eacf007ce80c4511538 https://www.encodeproject.org/files/ENCFF813SYI/@@download/ENCFF813SYI.bigWig hg19 released low read depth experiment not submitted to GEO ENCFF895DYF bigWig fold change over control ENCSR315NNL ChIP-seq EFO:0002067 K562 cell line Homo sapiens CHAMP1-human ENCAB469ASP DNA False 2017-11-14 ENCODE 3 ENCFF051LWI, ENCFF581ZJL, ENCFF592CXW 1885111580 ENCODE Processing Pipeline 797005369d3596cfe6962b110086f441 https://www.encodeproject.org/files/ENCFF895DYF/@@download/ENCFF895DYF.bigWig hg19 released low read depth experiment not submitted to GEO ENCFF775ZMD bigWig fold change over control ENCSR315NNL ChIP-seq EFO:0002067 K562 cell line Homo sapiens CHAMP1-human ENCAB469ASP DNA False 2017-11-14 ENCODE 1, 3 ENCFF051LWI, ENCFF537OYZ, ENCFF581ZJL, ENCFF592CXW 2263405500 ENCODE Processing Pipeline c1ac1c8e4193344768d96180c159bea8 https://www.encodeproject.org/files/ENCFF775ZMD/@@download/ENCFF775ZMD.bigWig hg19 released low read depth experiment not submitted to GEO ENCFF363BOT bed narrowPeak peaks ENCSR315NNL ChIP-seq EFO:0002067 K562 cell line Homo sapiens CHAMP1-human ENCAB469ASP DNA False 2017-11-14 ENCODE 1, 3 ENCFF051LWI, ENCFF537OYZ, ENCFF581ZJL, ENCFF592CXW 7144344 ENCODE Processing Pipeline fec12b7e8352b8a6301b1dab0f1dd32a https://www.encodeproject.org/files/ENCFF363BOT/@@download/ENCFF363BOT.bed.gz hg19 released low read depth experiment not submitted to GEO ENCFF602FRL bed narrowPeak optimal idr thresholded peaks ENCSR315NNL ChIP-seq EFO:0002067 K562 cell line Homo sapiens CHAMP1-human ENCAB469ASP DNA False 2017-11-14 ENCODE 1, 3 ENCFF001TDO, ENCFF363BOT, ENCFF553YOE, ENCFF689MDM 128718 ENCODE Processing Pipeline dd9c4a07d4caf38439993da0495bcfc5 https://www.encodeproject.org/files/ENCFF602FRL/@@download/ENCFF602FRL.bed.gz hg19 released low read depth experiment not submitted to GEO ENCFF710DGH bigBed narrowPeak peaks ENCSR315NNL ChIP-seq EFO:0002067 K562 cell line Homo sapiens CHAMP1-human ENCAB469ASP DNA False 2017-11-14 ENCODE 3 ENCFF553YOE 11205455 ENCODE Processing Pipeline cce3d0e3ddaf4c378e41ed52cb9d3bcf https://www.encodeproject.org/files/ENCFF710DGH/@@download/ENCFF710DGH.bigBed hg19 released low read depth experiment not submitted to GEO ENCFF584KVN bigBed narrowPeak peaks ENCSR315NNL ChIP-seq EFO:0002067 K562 cell line Homo sapiens CHAMP1-human ENCAB469ASP DNA False 2017-11-14 ENCODE 1, 3 ENCFF363BOT 13250842 ENCODE Processing Pipeline a8959a28eee2b6de0972df4824689053 https://www.encodeproject.org/files/ENCFF584KVN/@@download/ENCFF584KVN.bigBed hg19 released low read depth experiment not submitted to GEO ENCFF144MVR fastq reads ENCSR803EKW ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA2-human ENCAB155MHN DNA False 2018-01-26 ENCODE 2 1 100 paired-ended 1 ENCFF549XBX 3382279191 Michael Snyder, Stanford 2c8fcb3744bc4b2814fbe45b118678ef https://www.encodeproject.org/files/ENCFF144MVR/@@download/ENCFF144MVR.fastq.gz Illumina HiSeq 4000 /files/ENCFF259GQA/ released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF549XBX fastq reads ENCSR803EKW ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA2-human ENCAB155MHN DNA False 2018-01-26 ENCODE 2 1 100 paired-ended 2 ENCFF144MVR 3705994889 Michael Snyder, Stanford 07cdca881b29734ef11c6c3623998645 https://www.encodeproject.org/files/ENCFF549XBX/@@download/ENCFF549XBX.fastq.gz Illumina HiSeq 4000 /files/ENCFF837MIV/ released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF838ILR fastq reads ENCSR803EKW ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA2-human ENCAB155MHN DNA False 2018-01-26 ENCODE 1 1 100 paired-ended 2 ENCFF385CVM 3223194979 Michael Snyder, Stanford 0ecb602840158c87f9696942d3dbc3c0 https://www.encodeproject.org/files/ENCFF838ILR/@@download/ENCFF838ILR.fastq.gz Illumina HiSeq 4000 /files/ENCFF502GTS/ released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF385CVM fastq reads ENCSR803EKW ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA2-human ENCAB155MHN DNA False 2018-01-26 ENCODE 1 1 100 paired-ended 1 ENCFF838ILR 3000351501 Michael Snyder, Stanford edb306cab91e6ee93167fd18d7784041 https://www.encodeproject.org/files/ENCFF385CVM/@@download/ENCFF385CVM.fastq.gz Illumina HiSeq 4000 /files/ENCFF498JMO/ released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF567ICY bam unfiltered alignments ENCSR803EKW ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA2-human ENCAB155MHN DNA False 2018-01-26 ENCODE 1 100 ENCFF385CVM, ENCFF807MUK, ENCFF838ILR 6092352217 ENCODE Processing Pipeline 86ec8bdb2ef28533498670fb9bc0f525 https://www.encodeproject.org/files/ENCFF567ICY/@@download/ENCFF567ICY.bam hg19 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF689ZPF bam unfiltered alignments ENCSR803EKW ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA2-human ENCAB155MHN DNA False 2018-01-26 ENCODE 1 100 ENCFF385CVM, ENCFF643CGH, ENCFF838ILR 6101529751 ENCODE Processing Pipeline c5892a0a517af510349d66f0df21394e https://www.encodeproject.org/files/ENCFF689ZPF/@@download/ENCFF689ZPF.bam GRCh38 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF716BLV bam unfiltered alignments ENCSR803EKW ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA2-human ENCAB155MHN DNA False 2018-01-26 ENCODE 2 100 ENCFF144MVR, ENCFF549XBX, ENCFF643CGH 6838702192 ENCODE Processing Pipeline ce56e578c2cdc7853746acca620f8ac9 https://www.encodeproject.org/files/ENCFF716BLV/@@download/ENCFF716BLV.bam GRCh38 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF734KGE bam unfiltered alignments ENCSR803EKW ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA2-human ENCAB155MHN DNA False 2018-01-26 ENCODE 2 100 ENCFF144MVR, ENCFF549XBX, ENCFF807MUK 6830508270 ENCODE Processing Pipeline 30d394e377b4bb705bad261200d7f64b https://www.encodeproject.org/files/ENCFF734KGE/@@download/ENCFF734KGE.bam hg19 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF941ENT bam alignments ENCSR803EKW ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA2-human ENCAB155MHN DNA False 2018-01-26 ENCODE 1 100 ENCFF385CVM, ENCFF643CGH, ENCFF838ILR 4962774636 ENCODE Processing Pipeline 821dbf31b10baafad65e246886b3bfe7 https://www.encodeproject.org/files/ENCFF941ENT/@@download/ENCFF941ENT.bam GRCh38 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF413UYN bam alignments ENCSR803EKW ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA2-human ENCAB155MHN DNA False 2018-01-26 ENCODE 1 100 ENCFF385CVM, ENCFF807MUK, ENCFF838ILR 4957719538 ENCODE Processing Pipeline 02a55d7d096f626ddbf2e4c8ec9eaae1 https://www.encodeproject.org/files/ENCFF413UYN/@@download/ENCFF413UYN.bam hg19 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF314DOH bam alignments ENCSR803EKW ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA2-human ENCAB155MHN DNA False 2018-01-26 ENCODE 2 100 ENCFF144MVR, ENCFF549XBX, ENCFF807MUK 5116022440 ENCODE Processing Pipeline c3fe080dfb7662073fe385c2679dc234 https://www.encodeproject.org/files/ENCFF314DOH/@@download/ENCFF314DOH.bam hg19 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF495HQQ bam alignments ENCSR803EKW ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA2-human ENCAB155MHN DNA False 2018-01-26 ENCODE 2 100 ENCFF144MVR, ENCFF549XBX, ENCFF643CGH 5121155187 ENCODE Processing Pipeline b5646c9d08191650a76df21a2b280d1d https://www.encodeproject.org/files/ENCFF495HQQ/@@download/ENCFF495HQQ.bam GRCh38 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF919XQS bigWig signal p-value ENCSR803EKW ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA2-human ENCAB155MHN DNA False 2018-01-26 ENCODE 1 ENCFF160VXC, ENCFF413UYN, ENCFF834TUP 1881568244 ENCODE Processing Pipeline 8a913200262e50bc334c1180fb0f3bc2 https://www.encodeproject.org/files/ENCFF919XQS/@@download/ENCFF919XQS.bigWig hg19 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF752DMI bigWig signal p-value ENCSR803EKW ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA2-human ENCAB155MHN DNA False 2018-01-26 ENCODE 2 ENCFF314DOH, ENCFF834TUP 1429953543 ENCODE Processing Pipeline a2c5bd48cd700e9c39cd2c0eb2bcabe4 https://www.encodeproject.org/files/ENCFF752DMI/@@download/ENCFF752DMI.bigWig hg19 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF024WMC bigWig signal p-value ENCSR803EKW ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA2-human ENCAB155MHN DNA False 2018-01-26 ENCODE 1, 2 ENCFF160VXC, ENCFF314DOH, ENCFF413UYN, ENCFF834TUP 2420688435 ENCODE Processing Pipeline ef7c219a0ba42c34266f5faf0ab7caa3 https://www.encodeproject.org/files/ENCFF024WMC/@@download/ENCFF024WMC.bigWig hg19 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF002GPT bigWig fold change over control ENCSR803EKW ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA2-human ENCAB155MHN DNA False 2018-01-26 ENCODE 1 ENCFF160VXC, ENCFF413UYN, ENCFF834TUP 1980080252 ENCODE Processing Pipeline b1b8f98dc827f95b3858309aeb95069b https://www.encodeproject.org/files/ENCFF002GPT/@@download/ENCFF002GPT.bigWig hg19 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF970NMW bigWig fold change over control ENCSR803EKW ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA2-human ENCAB155MHN DNA False 2018-01-26 ENCODE 2 ENCFF314DOH, ENCFF834TUP 1553412462 ENCODE Processing Pipeline ea928ee10fea3a1ae710ea264a8cef66 https://www.encodeproject.org/files/ENCFF970NMW/@@download/ENCFF970NMW.bigWig hg19 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF645ZBF bigWig fold change over control ENCSR803EKW ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA2-human ENCAB155MHN DNA False 2018-01-26 ENCODE 1, 2 ENCFF160VXC, ENCFF314DOH, ENCFF413UYN, ENCFF834TUP 2534451811 ENCODE Processing Pipeline c42f5f087093eab3316b957886be3358 https://www.encodeproject.org/files/ENCFF645ZBF/@@download/ENCFF645ZBF.bigWig hg19 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF809LWB bed narrowPeak peaks ENCSR803EKW ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA2-human ENCAB155MHN DNA False 2018-01-26 ENCODE 1 ENCFF160VXC, ENCFF413UYN, ENCFF834TUP 7045721 ENCODE Processing Pipeline c6282301855b3803875411aa81deaee3 https://www.encodeproject.org/files/ENCFF809LWB/@@download/ENCFF809LWB.bed.gz hg19 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF676OHT bed narrowPeak peaks ENCSR803EKW ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA2-human ENCAB155MHN DNA False 2018-01-26 ENCODE 2 ENCFF314DOH, ENCFF834TUP 6953879 ENCODE Processing Pipeline 87d3691a0c6d969aeb56a7364ef2b65b https://www.encodeproject.org/files/ENCFF676OHT/@@download/ENCFF676OHT.bed.gz hg19 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF208GKL bed narrowPeak peaks ENCSR803EKW ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA2-human ENCAB155MHN DNA False 2018-01-26 ENCODE 1, 2 ENCFF160VXC, ENCFF314DOH, ENCFF413UYN, ENCFF834TUP 7209568 ENCODE Processing Pipeline 4cfd366e6eee1a6eec4215051bf7afef https://www.encodeproject.org/files/ENCFF208GKL/@@download/ENCFF208GKL.bed.gz hg19 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF607IDF bigBed narrowPeak peaks ENCSR803EKW ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA2-human ENCAB155MHN DNA False 2018-01-26 ENCODE 2 ENCFF676OHT 11135375 ENCODE Processing Pipeline bb95eaa2babb91df7d7d6366d4ca4a56 https://www.encodeproject.org/files/ENCFF607IDF/@@download/ENCFF607IDF.bigBed hg19 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF076XPO bigBed narrowPeak peaks ENCSR803EKW ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA2-human ENCAB155MHN DNA False 2018-01-26 ENCODE 1 ENCFF809LWB 10970480 ENCODE Processing Pipeline 66da506198956eb1c4f1c195bab88f3f https://www.encodeproject.org/files/ENCFF076XPO/@@download/ENCFF076XPO.bigBed hg19 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF469IZX bigBed narrowPeak peaks ENCSR803EKW ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA2-human ENCAB155MHN DNA False 2018-01-26 ENCODE 1, 2 ENCFF208GKL 10858895 ENCODE Processing Pipeline faa75e1f4e56342157a07833173413b3 https://www.encodeproject.org/files/ENCFF469IZX/@@download/ENCFF469IZX.bigBed hg19 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF550NJW bed narrowPeak conservative idr thresholded peaks ENCSR803EKW ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA2-human ENCAB155MHN DNA False 2018-01-26 ENCODE 1, 2 ENCFF001TDO, ENCFF208GKL, ENCFF676OHT, ENCFF809LWB 47427 ENCODE Processing Pipeline 468b2e1f241a62c4e35c62cffe163f4b https://www.encodeproject.org/files/ENCFF550NJW/@@download/ENCFF550NJW.bed.gz hg19 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF914RFS bed narrowPeak optimal idr thresholded peaks ENCSR803EKW ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA2-human ENCAB155MHN DNA False 2018-01-26 ENCODE 1, 2 ENCFF001TDO, ENCFF208GKL, ENCFF676OHT, ENCFF809LWB 59210 ENCODE Processing Pipeline 289ffb2b564ccc8cc2ef594a4cfcf6d4 https://www.encodeproject.org/files/ENCFF914RFS/@@download/ENCFF914RFS.bed.gz hg19 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF689TVN bigBed narrowPeak conservative idr thresholded peaks ENCSR803EKW ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA2-human ENCAB155MHN DNA False 2018-01-26 ENCODE 1, 2 ENCFF550NJW 132807 ENCODE Processing Pipeline f340b14f89b974d4a2ec0241acb1da3f https://www.encodeproject.org/files/ENCFF689TVN/@@download/ENCFF689TVN.bigBed hg19 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF518VTD bigBed narrowPeak optimal idr thresholded peaks ENCSR803EKW ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA2-human ENCAB155MHN DNA False 2018-01-26 ENCODE 1, 2 ENCFF914RFS 148960 ENCODE Processing Pipeline 8c4e3a2c395af5d65155b6631f6a121f https://www.encodeproject.org/files/ENCFF518VTD/@@download/ENCFF518VTD.bigBed hg19 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF848DRV bigWig signal p-value ENCSR803EKW ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA2-human ENCAB155MHN DNA False 2018-01-26 ENCODE 1 ENCFF941ENT 1591429089 ENCODE Processing Pipeline 748e3f877fe393db127359c232d52dfe https://www.encodeproject.org/files/ENCFF848DRV/@@download/ENCFF848DRV.bigWig GRCh38 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF087TYN bigWig signal p-value ENCSR803EKW ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA2-human ENCAB155MHN DNA False 2018-01-26 ENCODE 2 ENCFF495HQQ 1326540172 ENCODE Processing Pipeline e7bf0c7d06b2c5250bd6d64d1e9d680f https://www.encodeproject.org/files/ENCFF087TYN/@@download/ENCFF087TYN.bigWig GRCh38 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF945OIV bigWig signal p-value ENCSR803EKW ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA2-human ENCAB155MHN DNA False 2018-01-26 ENCODE 1, 2 ENCFF495HQQ, ENCFF941ENT 2451213103 ENCODE Processing Pipeline fbfc7d0bfa567155399df2390a6ed88c https://www.encodeproject.org/files/ENCFF945OIV/@@download/ENCFF945OIV.bigWig GRCh38 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF184OFZ bigWig fold change over control ENCSR803EKW ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA2-human ENCAB155MHN DNA False 2018-01-26 ENCODE 1 ENCFF941ENT 1952576271 ENCODE Processing Pipeline 77a751786907cf68724310703db9ae52 https://www.encodeproject.org/files/ENCFF184OFZ/@@download/ENCFF184OFZ.bigWig GRCh38 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF877JNZ bigWig fold change over control ENCSR803EKW ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA2-human ENCAB155MHN DNA False 2018-01-26 ENCODE 2 ENCFF495HQQ 1548027499 ENCODE Processing Pipeline 4b99d9daf11d3e0a54a5e3754c5e6d37 https://www.encodeproject.org/files/ENCFF877JNZ/@@download/ENCFF877JNZ.bigWig GRCh38 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF526WXA bigWig fold change over control ENCSR803EKW ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA2-human ENCAB155MHN DNA False 2018-01-26 ENCODE 1, 2 ENCFF495HQQ, ENCFF941ENT 2560979951 ENCODE Processing Pipeline ebf733036d83797ffc92028f8e053ce1 https://www.encodeproject.org/files/ENCFF526WXA/@@download/ENCFF526WXA.bigWig GRCh38 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF898JPZ bed narrowPeak peaks ENCSR803EKW ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA2-human ENCAB155MHN DNA False 2018-01-26 ENCODE 1 ENCFF941ENT 6994500 ENCODE Processing Pipeline be87f866744c23aeed7d76240383d2d3 https://www.encodeproject.org/files/ENCFF898JPZ/@@download/ENCFF898JPZ.bed.gz GRCh38 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF515YDX bed narrowPeak peaks ENCSR803EKW ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA2-human ENCAB155MHN DNA False 2018-01-26 ENCODE 2 ENCFF495HQQ 6826636 ENCODE Processing Pipeline 763a932d195bf3d288e513dbe6ae4dc5 https://www.encodeproject.org/files/ENCFF515YDX/@@download/ENCFF515YDX.bed.gz GRCh38 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF785KHZ bigBed narrowPeak peaks ENCSR803EKW ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA2-human ENCAB155MHN DNA False 2018-01-26 ENCODE 1 ENCFF898JPZ 10984257 ENCODE Processing Pipeline 03f5f5e8b0d3abb5821e0e4c81d6a5e2 https://www.encodeproject.org/files/ENCFF785KHZ/@@download/ENCFF785KHZ.bigBed GRCh38 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF614DYM bed narrowPeak peaks ENCSR803EKW ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA2-human ENCAB155MHN DNA False 2018-01-26 ENCODE 1, 2 ENCFF495HQQ, ENCFF941ENT 7206887 ENCODE Processing Pipeline 4f03e0c728edae1ca01d8a665f649623 https://www.encodeproject.org/files/ENCFF614DYM/@@download/ENCFF614DYM.bed.gz GRCh38 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF973OJR bigBed narrowPeak peaks ENCSR803EKW ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA2-human ENCAB155MHN DNA False 2018-01-26 ENCODE 2 ENCFF515YDX 11153808 ENCODE Processing Pipeline dcae96516bca487cf0b074f6e9aa01b5 https://www.encodeproject.org/files/ENCFF973OJR/@@download/ENCFF973OJR.bigBed GRCh38 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF944XOJ bigBed narrowPeak peaks ENCSR803EKW ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA2-human ENCAB155MHN DNA False 2018-01-26 ENCODE 1, 2 ENCFF614DYM 10858384 ENCODE Processing Pipeline 120438273b21fc3f98fd6987733ca341 https://www.encodeproject.org/files/ENCFF944XOJ/@@download/ENCFF944XOJ.bigBed GRCh38 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF071SOH bed narrowPeak optimal idr thresholded peaks ENCSR803EKW ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA2-human ENCAB155MHN DNA False 2018-01-26 ENCODE 1, 2 ENCFF419RSJ, ENCFF515YDX, ENCFF614DYM, ENCFF898JPZ 58213 ENCODE Processing Pipeline 03d66020b0efbe75962febcd75003fc8 https://www.encodeproject.org/files/ENCFF071SOH/@@download/ENCFF071SOH.bed.gz GRCh38 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF989AVX bed narrowPeak conservative idr thresholded peaks ENCSR803EKW ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA2-human ENCAB155MHN DNA False 2018-01-26 ENCODE 1, 2 ENCFF419RSJ, ENCFF515YDX, ENCFF614DYM, ENCFF898JPZ 47896 ENCODE Processing Pipeline 00180fa82592652220b2869e9670b4dd https://www.encodeproject.org/files/ENCFF989AVX/@@download/ENCFF989AVX.bed.gz GRCh38 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF523VEA bigBed narrowPeak conservative idr thresholded peaks ENCSR803EKW ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA2-human ENCAB155MHN DNA False 2018-01-26 ENCODE 1, 2 ENCFF989AVX 135208 ENCODE Processing Pipeline 09a237b9e18d72183e6535313cf5e1f9 https://www.encodeproject.org/files/ENCFF523VEA/@@download/ENCFF523VEA.bigBed GRCh38 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF982DCX bigBed narrowPeak optimal idr thresholded peaks ENCSR803EKW ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA2-human ENCAB155MHN DNA False 2018-01-26 ENCODE 1, 2 ENCFF071SOH 149162 ENCODE Processing Pipeline 2f8863d7e4d87a201499d31d5ae93a4b https://www.encodeproject.org/files/ENCFF982DCX/@@download/ENCFF982DCX.bigBed GRCh38 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF834GLZ bam unfiltered alignments ENCSR376WCJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens IRF2-human ENCAB001RIV DNA False 2014-07-07 ENCODE 1 36 ENCFF002EEJ, ENCFF807MUK 1284119654 ENCODE Processing Pipeline 2b8b596791e5a2b0bbdabb112b7c62a3 https://www.encodeproject.org/files/ENCFF834GLZ/@@download/ENCFF834GLZ.bam hg19 released low read length ENCFF257LBR bam unfiltered alignments ENCSR376WCJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens IRF2-human ENCAB001RIV DNA False 2014-07-07 ENCODE 3 36 ENCFF002EEC, ENCFF807MUK 1405980774 ENCODE Processing Pipeline f51f4e939f03afdb73b22d4fb7644945 https://www.encodeproject.org/files/ENCFF257LBR/@@download/ENCFF257LBR.bam hg19 released low read length ENCFF530GSV bigWig signal p-value ENCSR376WCJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens IRF2-human ENCAB001RIV DNA False 2014-07-07 ENCODE 1 ENCFF147VCN, ENCFF335IPE 526138552 ENCODE Processing Pipeline c6cfbbcc3349a0ab8ace0b30ad74eb42 https://www.encodeproject.org/files/ENCFF530GSV/@@download/ENCFF530GSV.bigWig hg19 released low read length ENCFF053WXX bigWig fold change over control ENCSR376WCJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens IRF2-human ENCAB001RIV DNA False 2014-07-07 ENCODE 1 ENCFF147VCN, ENCFF335IPE 505200355 ENCODE Processing Pipeline 5b8eee65970c6516a089d7eea7ea70d6 https://www.encodeproject.org/files/ENCFF053WXX/@@download/ENCFF053WXX.bigWig hg19 released low read length ENCFF251DTP bigWig signal p-value ENCSR376WCJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens IRF2-human ENCAB001RIV DNA False 2014-07-07 ENCODE 3 ENCFF852RLW, ENCFF879OQC 538627554 ENCODE Processing Pipeline 44ca5601883139abb1fda7d3580f6bdd https://www.encodeproject.org/files/ENCFF251DTP/@@download/ENCFF251DTP.bigWig hg19 released low read length ENCFF968IRL bigWig signal p-value ENCSR376WCJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens IRF2-human ENCAB001RIV DNA False 2014-07-07 ENCODE 1, 3 ENCFF147VCN, ENCFF335IPE, ENCFF852RLW, ENCFF879OQC 1092335451 ENCODE Processing Pipeline 129ddf75ae9b32f2b865a9809133bd2a https://www.encodeproject.org/files/ENCFF968IRL/@@download/ENCFF968IRL.bigWig hg19 released low read length ENCFF166YOH bigWig fold change over control ENCSR376WCJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens IRF2-human ENCAB001RIV DNA False 2014-07-07 ENCODE 3 ENCFF852RLW, ENCFF879OQC 531324620 ENCODE Processing Pipeline 4d4514a2c5d8adf8981f51ecf1e06f1e https://www.encodeproject.org/files/ENCFF166YOH/@@download/ENCFF166YOH.bigWig hg19 released low read length ENCFF319KZQ bigWig fold change over control ENCSR376WCJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens IRF2-human ENCAB001RIV DNA False 2014-07-07 ENCODE 1, 3 ENCFF147VCN, ENCFF335IPE, ENCFF852RLW, ENCFF879OQC 1108365931 ENCODE Processing Pipeline 010e8dff29ddadbb390162f6d25b5823 https://www.encodeproject.org/files/ENCFF319KZQ/@@download/ENCFF319KZQ.bigWig hg19 released low read length ENCFF903CMR bed narrowPeak peaks ENCSR376WCJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens IRF2-human ENCAB001RIV DNA False 2014-07-07 ENCODE 3 ENCFF852RLW, ENCFF879OQC 5463308 ENCODE Processing Pipeline 62a7c136c7f270aafa1a4fac94b275f7 https://www.encodeproject.org/files/ENCFF903CMR/@@download/ENCFF903CMR.bed.gz hg19 released low read length ENCFF093CQB bigBed narrowPeak peaks ENCSR376WCJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens IRF2-human ENCAB001RIV DNA False 2014-07-07 ENCODE 1, 3 ENCFF084ZRH 13515363 ENCODE Processing Pipeline c3f19463a13c286b24f00e740affa4dc https://www.encodeproject.org/files/ENCFF093CQB/@@download/ENCFF093CQB.bigBed hg19 released low read length ENCFF324USK bed narrowPeak conservative idr thresholded peaks ENCSR376WCJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens IRF2-human ENCAB001RIV DNA False 2014-07-07 ENCODE 1, 3 ENCFF001TDO, ENCFF084ZRH, ENCFF663ORW, ENCFF903CMR 111947 ENCODE Processing Pipeline df5de3d7fdaa782bc803d8636a810752 https://www.encodeproject.org/files/ENCFF324USK/@@download/ENCFF324USK.bed.gz hg19 released low read length ENCFF601DIL bigBed narrowPeak conservative idr thresholded peaks ENCSR376WCJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens IRF2-human ENCAB001RIV DNA False 2014-07-07 ENCODE 1, 3 ENCFF324USK 280887 ENCODE Processing Pipeline a5d8183beb727b8e1f04d809ac3afb04 https://www.encodeproject.org/files/ENCFF601DIL/@@download/ENCFF601DIL.bigBed hg19 released low read length ENCFF663ORW bed narrowPeak peaks ENCSR376WCJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens IRF2-human ENCAB001RIV DNA False 2014-07-07 ENCODE 1 ENCFF147VCN, ENCFF335IPE 5124788 ENCODE Processing Pipeline 8684d01437d6b6e47679a749aacccb94 https://www.encodeproject.org/files/ENCFF663ORW/@@download/ENCFF663ORW.bed.gz hg19 released low read length ENCFF084ZRH bed narrowPeak peaks ENCSR376WCJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens IRF2-human ENCAB001RIV DNA False 2014-07-07 ENCODE 1, 3 ENCFF147VCN, ENCFF335IPE, ENCFF852RLW, ENCFF879OQC 6582440 ENCODE Processing Pipeline 4bc00609b7376f5ca21105ebd930e822 https://www.encodeproject.org/files/ENCFF084ZRH/@@download/ENCFF084ZRH.bed.gz hg19 released low read length ENCFF698QPL bigBed narrowPeak peaks ENCSR376WCJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens IRF2-human ENCAB001RIV DNA False 2014-07-07 ENCODE 1 ENCFF663ORW 11119862 ENCODE Processing Pipeline 63d8f1c41ab180ee2660cf09300616d4 https://www.encodeproject.org/files/ENCFF698QPL/@@download/ENCFF698QPL.bigBed hg19 released low read length ENCFF724XME bigBed narrowPeak peaks ENCSR376WCJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens IRF2-human ENCAB001RIV DNA False 2014-07-07 ENCODE 3 ENCFF903CMR 13353811 ENCODE Processing Pipeline 8ecc2ae332db031116b01a2959a575ea https://www.encodeproject.org/files/ENCFF724XME/@@download/ENCFF724XME.bigBed hg19 released low read length ENCFF384YDT bed narrowPeak optimal idr thresholded peaks ENCSR376WCJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens IRF2-human ENCAB001RIV DNA False 2014-07-07 ENCODE 1, 3 ENCFF001TDO, ENCFF084ZRH, ENCFF663ORW, ENCFF903CMR 152742 ENCODE Processing Pipeline c35e488a7197f89d865f37f8aa5f4343 https://www.encodeproject.org/files/ENCFF384YDT/@@download/ENCFF384YDT.bed.gz hg19 released low read length ENCFF238AQH bigBed narrowPeak optimal idr thresholded peaks ENCSR376WCJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens IRF2-human ENCAB001RIV DNA False 2014-07-07 ENCODE 1, 3 ENCFF384YDT 341211 ENCODE Processing Pipeline fac5ca207d3a6043261b7daaebcc7d33 https://www.encodeproject.org/files/ENCFF238AQH/@@download/ENCFF238AQH.bigBed hg19 released low read length ENCFF002EEC fastq reads ENCSR376WCJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens IRF2-human ENCAB001RIV DNA False 2014-07-07 ENCODE 3 1 36 single-ended 1151961310 Michael Snyder, Stanford a6c5b80b5505b4907fd352e673b3102e SRA:SRR5111503 https://www.encodeproject.org/files/ENCFF002EEC/@@download/ENCFF002EEC.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF002ECS/ released low read length ENCFF002EEJ fastq reads ENCSR376WCJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens IRF2-human ENCAB001RIV DNA False 2014-07-07 ENCODE 1 1 36 single-ended 1050137304 Michael Snyder, Stanford 0fdb16a7aa7ca00b2a1b4fd8c20a4bea SRA:SRR5111502 https://www.encodeproject.org/files/ENCFF002EEJ/@@download/ENCFF002EEJ.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF002ECW/ released low read length ENCFF147VCN bam alignments ENCSR376WCJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens IRF2-human ENCAB001RIV DNA False 2014-07-07 ENCODE 1 36 ENCFF002EEJ, ENCFF807MUK 907232879 ENCODE Processing Pipeline 03504027d6d2aec11a29cd4df610471d https://www.encodeproject.org/files/ENCFF147VCN/@@download/ENCFF147VCN.bam hg19 released low read length ENCFF852RLW bam alignments ENCSR376WCJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens IRF2-human ENCAB001RIV DNA False 2014-07-07 ENCODE 3 36 ENCFF002EEC, ENCFF807MUK 1007981529 ENCODE Processing Pipeline 12e21b7f9d23c095f545dd9b734740f2 https://www.encodeproject.org/files/ENCFF852RLW/@@download/ENCFF852RLW.bam hg19 released low read length ENCFF135ZSD bigWig signal p-value ENCSR376WCJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens IRF2-human ENCAB001RIV DNA False 2014-07-07 ENCODE 1 ENCFF147VCN, ENCFF335IPE 533764573 ENCODE Processing Pipeline 42469c710ba29865d6225048bc48638a https://www.encodeproject.org/files/ENCFF135ZSD/@@download/ENCFF135ZSD.bigWig hg19 archived low read length ENCFF393MAO bigWig signal p-value ENCSR376WCJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens IRF2-human ENCAB001RIV DNA False 2014-07-07 ENCODE 3 ENCFF852RLW, ENCFF879OQC 538902835 ENCODE Processing Pipeline dba3076f78674bfe058fef29b5620b5f https://www.encodeproject.org/files/ENCFF393MAO/@@download/ENCFF393MAO.bigWig hg19 archived low read length ENCFF412ARP bigWig signal p-value ENCSR376WCJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens IRF2-human ENCAB001RIV DNA False 2014-07-07 ENCODE 1, 3 ENCFF147VCN, ENCFF335IPE, ENCFF852RLW, ENCFF879OQC 1089142441 ENCODE Processing Pipeline 728e19387e27b47eb0731e091426cbb1 https://www.encodeproject.org/files/ENCFF412ARP/@@download/ENCFF412ARP.bigWig hg19 archived low read length ENCFF983XNF bigWig fold change over control ENCSR376WCJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens IRF2-human ENCAB001RIV DNA False 2014-07-07 ENCODE 1 ENCFF147VCN, ENCFF335IPE 518450444 ENCODE Processing Pipeline 08cbfbc8734f4ee3010d34dac5901567 https://www.encodeproject.org/files/ENCFF983XNF/@@download/ENCFF983XNF.bigWig hg19 archived low read length ENCFF344JYX bigWig fold change over control ENCSR376WCJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens IRF2-human ENCAB001RIV DNA False 2014-07-07 ENCODE 3 ENCFF852RLW, ENCFF879OQC 536487921 ENCODE Processing Pipeline c4a77c06c07294a3805dc7097b7190a6 https://www.encodeproject.org/files/ENCFF344JYX/@@download/ENCFF344JYX.bigWig hg19 archived low read length ENCFF982NLI bigWig fold change over control ENCSR376WCJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens IRF2-human ENCAB001RIV DNA False 2014-07-07 ENCODE 1, 3 ENCFF147VCN, ENCFF335IPE, ENCFF852RLW, ENCFF879OQC 1111128511 ENCODE Processing Pipeline 43b37f68471d32a64c21d757765abae5 https://www.encodeproject.org/files/ENCFF982NLI/@@download/ENCFF982NLI.bigWig hg19 archived low read length ENCFF063GMG bed narrowPeak peaks ENCSR376WCJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens IRF2-human ENCAB001RIV DNA False 2014-07-07 ENCODE 1, 3 ENCFF147VCN, ENCFF335IPE, ENCFF852RLW, ENCFF879OQC 6729858 ENCODE Processing Pipeline a9f8443f4492d3091639f0cd7a56157d https://www.encodeproject.org/files/ENCFF063GMG/@@download/ENCFF063GMG.bed.gz hg19 archived low read length ENCFF135VWG bed narrowPeak peaks ENCSR376WCJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens IRF2-human ENCAB001RIV DNA False 2014-07-07 ENCODE 3 ENCFF852RLW, ENCFF879OQC 5660342 ENCODE Processing Pipeline b7a0aac41ac7f624fc8866dbfd8e2129 https://www.encodeproject.org/files/ENCFF135VWG/@@download/ENCFF135VWG.bed.gz hg19 archived low read length ENCFF770GWM bed narrowPeak peaks ENCSR376WCJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens IRF2-human ENCAB001RIV DNA False 2014-07-07 ENCODE 1 ENCFF147VCN, ENCFF335IPE 5247189 ENCODE Processing Pipeline ae86b2319905c3bbce4a66fa7affa0a3 https://www.encodeproject.org/files/ENCFF770GWM/@@download/ENCFF770GWM.bed.gz hg19 archived low read length ENCFF536ILS bigBed narrowPeak peaks ENCSR376WCJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens IRF2-human ENCAB001RIV DNA False 2014-07-07 ENCODE 1 ENCFF770GWM 11177698 ENCODE Processing Pipeline dc97e62a0c2b4189a68307ed3a54ca9f https://www.encodeproject.org/files/ENCFF536ILS/@@download/ENCFF536ILS.bigBed hg19 archived low read length ENCFF330GBX bigBed narrowPeak peaks ENCSR376WCJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens IRF2-human ENCAB001RIV DNA False 2014-07-07 ENCODE 3 ENCFF135VWG 13421883 ENCODE Processing Pipeline 9af922c5c220bb7be78b1d65650224f4 https://www.encodeproject.org/files/ENCFF330GBX/@@download/ENCFF330GBX.bigBed hg19 archived low read length ENCFF522ODG bigBed narrowPeak peaks ENCSR376WCJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens IRF2-human ENCAB001RIV DNA False 2014-07-07 ENCODE 1, 3 ENCFF063GMG 13521813 ENCODE Processing Pipeline 40ce31e04b33db2a7ed28f26e05698b0 https://www.encodeproject.org/files/ENCFF522ODG/@@download/ENCFF522ODG.bigBed hg19 archived low read length ENCFF463OMQ bam unfiltered alignments ENCSR376WCJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens IRF2-human ENCAB001RIV DNA False 2014-07-07 ENCODE 3 36 ENCFF002EEC, ENCFF643CGH 1412020822 ENCODE Processing Pipeline 89d5d0ab2d6d8be214cf44d16745d2d1 https://www.encodeproject.org/files/ENCFF463OMQ/@@download/ENCFF463OMQ.bam GRCh38 released low read length ENCFF826PAN bam unfiltered alignments ENCSR376WCJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens IRF2-human ENCAB001RIV DNA False 2014-07-07 ENCODE 1 36 ENCFF002EEJ, ENCFF643CGH 1289602835 ENCODE Processing Pipeline 13cc3d159d00ab9c4029c64b34c77d5b https://www.encodeproject.org/files/ENCFF826PAN/@@download/ENCFF826PAN.bam GRCh38 released low read length ENCFF178EJY bam alignments ENCSR376WCJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens IRF2-human ENCAB001RIV DNA False 2014-07-07 ENCODE 1 36 ENCFF002EEJ, ENCFF643CGH 906593354 ENCODE Processing Pipeline d8aa561cc4b668a1147ae8572512de72 https://www.encodeproject.org/files/ENCFF178EJY/@@download/ENCFF178EJY.bam GRCh38 released low read length ENCFF057KBN bam alignments ENCSR376WCJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens IRF2-human ENCAB001RIV DNA False 2014-07-07 ENCODE 3 36 ENCFF002EEC, ENCFF643CGH 1007216977 ENCODE Processing Pipeline c7707a38aa34856df9e1580183e4c5de https://www.encodeproject.org/files/ENCFF057KBN/@@download/ENCFF057KBN.bam GRCh38 released low read length ENCFF167JEV bigWig signal p-value ENCSR376WCJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens IRF2-human ENCAB001RIV DNA False 2014-07-07 ENCODE 1 ENCFF156FED, ENCFF178EJY 530599910 ENCODE Processing Pipeline fe16161332ffa55c67f865e8c181dccb https://www.encodeproject.org/files/ENCFF167JEV/@@download/ENCFF167JEV.bigWig GRCh38 released low read length ENCFF513NLG bigWig signal p-value ENCSR376WCJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens IRF2-human ENCAB001RIV DNA False 2014-07-07 ENCODE 3 ENCFF057KBN, ENCFF577FNG 616321813 ENCODE Processing Pipeline 162c143c609465086b67d3728baa789c https://www.encodeproject.org/files/ENCFF513NLG/@@download/ENCFF513NLG.bigWig GRCh38 released low read length ENCFF123RXA bigWig signal p-value ENCSR376WCJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens IRF2-human ENCAB001RIV DNA False 2014-07-07 ENCODE 1, 3 ENCFF057KBN, ENCFF156FED, ENCFF178EJY, ENCFF577FNG 951074846 ENCODE Processing Pipeline f07a186d5c845a27b6cc1b89abf8dc79 https://www.encodeproject.org/files/ENCFF123RXA/@@download/ENCFF123RXA.bigWig GRCh38 released low read length ENCFF201SQA bigWig fold change over control ENCSR376WCJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens IRF2-human ENCAB001RIV DNA False 2014-07-07 ENCODE 1 ENCFF156FED, ENCFF178EJY 501313359 ENCODE Processing Pipeline 60cd9da4470b2269cde3d36136ac8bcc https://www.encodeproject.org/files/ENCFF201SQA/@@download/ENCFF201SQA.bigWig GRCh38 released low read length ENCFF809YCV bigWig fold change over control ENCSR376WCJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens IRF2-human ENCAB001RIV DNA False 2014-07-07 ENCODE 3 ENCFF057KBN, ENCFF577FNG 529461363 ENCODE Processing Pipeline 6e83bb59d1a27059444b84118206ea30 https://www.encodeproject.org/files/ENCFF809YCV/@@download/ENCFF809YCV.bigWig GRCh38 released low read length ENCFF887HOR bigWig fold change over control ENCSR376WCJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens IRF2-human ENCAB001RIV DNA False 2014-07-07 ENCODE 1, 3 ENCFF057KBN, ENCFF156FED, ENCFF178EJY, ENCFF577FNG 1091898518 ENCODE Processing Pipeline 38b642c089fdf7ad2c0684a518bd5dc7 https://www.encodeproject.org/files/ENCFF887HOR/@@download/ENCFF887HOR.bigWig GRCh38 released low read length ENCFF344HRG bed narrowPeak peaks ENCSR376WCJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens IRF2-human ENCAB001RIV DNA False 2014-07-07 ENCODE 1 ENCFF156FED, ENCFF178EJY 5121643 ENCODE Processing Pipeline 208f76b1214d2c8bc120a6addc214a9b https://www.encodeproject.org/files/ENCFF344HRG/@@download/ENCFF344HRG.bed.gz GRCh38 released low read length ENCFF057BVY bigBed narrowPeak peaks ENCSR376WCJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens IRF2-human ENCAB001RIV DNA False 2014-07-07 ENCODE 1 ENCFF344HRG 11121835 ENCODE Processing Pipeline 304bc20b66a8487f655052e35ba0a071 https://www.encodeproject.org/files/ENCFF057BVY/@@download/ENCFF057BVY.bigBed GRCh38 released low read length ENCFF886EVL bed narrowPeak optimal idr thresholded peaks ENCSR376WCJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens IRF2-human ENCAB001RIV DNA False 2014-07-07 ENCODE 1, 3 ENCFF344HRG, ENCFF419RSJ, ENCFF785QCU, ENCFF934EYD 162552 ENCODE Processing Pipeline d9a2d56a4d106637d515cedb4176fae9 https://www.encodeproject.org/files/ENCFF886EVL/@@download/ENCFF886EVL.bed.gz GRCh38 released low read length ENCFF785QCU bed narrowPeak peaks ENCSR376WCJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens IRF2-human ENCAB001RIV DNA False 2014-07-07 ENCODE 3 ENCFF057KBN, ENCFF577FNG 5470469 ENCODE Processing Pipeline f56050b119170957b4278817f4a37ea9 https://www.encodeproject.org/files/ENCFF785QCU/@@download/ENCFF785QCU.bed.gz GRCh38 released low read length ENCFF644KFP bigBed narrowPeak peaks ENCSR376WCJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens IRF2-human ENCAB001RIV DNA False 2014-07-07 ENCODE 1, 3 ENCFF934EYD 13537708 ENCODE Processing Pipeline 22bbc9035ca6b4324a464cc2e027a4ca https://www.encodeproject.org/files/ENCFF644KFP/@@download/ENCFF644KFP.bigBed GRCh38 released low read length ENCFF934EYD bed narrowPeak peaks ENCSR376WCJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens IRF2-human ENCAB001RIV DNA False 2014-07-07 ENCODE 1, 3 ENCFF057KBN, ENCFF156FED, ENCFF178EJY, ENCFF577FNG 6596165 ENCODE Processing Pipeline 4426ab492f93716962efe1b69d6e2707 https://www.encodeproject.org/files/ENCFF934EYD/@@download/ENCFF934EYD.bed.gz GRCh38 released low read length ENCFF340GRQ bigBed narrowPeak optimal idr thresholded peaks ENCSR376WCJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens IRF2-human ENCAB001RIV DNA False 2014-07-07 ENCODE 1, 3 ENCFF886EVL 356129 ENCODE Processing Pipeline 4ec0a1500d0a8365195f47646a5ab41f https://www.encodeproject.org/files/ENCFF340GRQ/@@download/ENCFF340GRQ.bigBed GRCh38 released low read length ENCFF403GZC bed narrowPeak conservative idr thresholded peaks ENCSR376WCJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens IRF2-human ENCAB001RIV DNA False 2014-07-07 ENCODE 1, 3 ENCFF344HRG, ENCFF419RSJ, ENCFF785QCU, ENCFF934EYD 117587 ENCODE Processing Pipeline 810a3ceaf02c4b0befba613f5be4f648 https://www.encodeproject.org/files/ENCFF403GZC/@@download/ENCFF403GZC.bed.gz GRCh38 released low read length ENCFF824LTN bigBed narrowPeak peaks ENCSR376WCJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens IRF2-human ENCAB001RIV DNA False 2014-07-07 ENCODE 3 ENCFF785QCU 13370738 ENCODE Processing Pipeline b49044c1e9442e21d74c236e465f2ec0 https://www.encodeproject.org/files/ENCFF824LTN/@@download/ENCFF824LTN.bigBed GRCh38 released low read length ENCFF795DPX bigBed narrowPeak conservative idr thresholded peaks ENCSR376WCJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens IRF2-human ENCAB001RIV DNA False 2014-07-07 ENCODE 1, 3 ENCFF403GZC 289143 ENCODE Processing Pipeline 5e4756816e1a79cb560add7377c13a6c https://www.encodeproject.org/files/ENCFF795DPX/@@download/ENCFF795DPX.bigBed GRCh38 released low read length ENCFF629ZSD bed narrowPeak conservative idr thresholded peaks ENCSR376WCJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens IRF2-human ENCAB001RIV DNA False 2014-07-07 ENCODE 1, 3 ENCFF001TDO, ENCFF063GMG, ENCFF135VWG, ENCFF770GWM 98680 ENCODE Processing Pipeline 8d60e8b213fe10958274f490e0cfe048 https://www.encodeproject.org/files/ENCFF629ZSD/@@download/ENCFF629ZSD.bed.gz hg19 archived low read length ENCFF356VXM bigBed narrowPeak optimal idr thresholded peaks ENCSR376WCJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens IRF2-human ENCAB001RIV DNA False 2014-07-07 ENCODE 1, 3 ENCFF231TGQ 252168 ENCODE Processing Pipeline d4665d899e1217c9e33141348b270b5e https://www.encodeproject.org/files/ENCFF356VXM/@@download/ENCFF356VXM.bigBed hg19 archived low read length ENCFF231TGQ bed narrowPeak optimal idr thresholded peaks ENCSR376WCJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens IRF2-human ENCAB001RIV DNA False 2014-07-07 ENCODE 1, 3 ENCFF001TDO, ENCFF063GMG, ENCFF135VWG, ENCFF770GWM 131926 ENCODE Processing Pipeline 18f3a5f97cca0b5c798f4d6623c542f8 https://www.encodeproject.org/files/ENCFF231TGQ/@@download/ENCFF231TGQ.bed.gz hg19 archived low read length ENCFF576LYW bigBed narrowPeak conservative idr thresholded peaks ENCSR376WCJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens IRF2-human ENCAB001RIV DNA False 2014-07-07 ENCODE 1, 3 ENCFF629ZSD 211442 ENCODE Processing Pipeline 00fa7e5c5241ae37dcfe40190dd214c1 https://www.encodeproject.org/files/ENCFF576LYW/@@download/ENCFF576LYW.bigBed hg19 archived low read length ENCFF838DSG bam unfiltered alignments ENCSR815ZDS ChIP-seq EFO:0002067 K562 cell line Homo sapiens SREBF1-human ENCAB000ALC DNA False 2014-07-07 ENCODE 1 36 ENCFF002EEL, ENCFF807MUK 606149297 ENCODE Processing Pipeline ccff34c150457dc7f4914abe2ea99d85 https://www.encodeproject.org/files/ENCFF838DSG/@@download/ENCFF838DSG.bam hg19 released borderline replicate concordance, low read depth, antibody characterized with exemption, low read length ENCFF946HUY bam unfiltered alignments ENCSR815ZDS ChIP-seq EFO:0002067 K562 cell line Homo sapiens SREBF1-human ENCAB000ALC DNA False 2014-07-07 ENCODE 2 36 ENCFF002EEP, ENCFF807MUK 1078512316 ENCODE Processing Pipeline a3cc11893497ce06a5cafe8ed54c4586 https://www.encodeproject.org/files/ENCFF946HUY/@@download/ENCFF946HUY.bam hg19 released borderline replicate concordance, low read depth, antibody characterized with exemption, low read length ENCFF636TMC bigWig signal p-value ENCSR815ZDS ChIP-seq EFO:0002067 K562 cell line Homo sapiens SREBF1-human ENCAB000ALC DNA False 2014-07-07 ENCODE 1, 2 ENCFF295KFF, ENCFF335IPE, ENCFF592VTW, ENCFF879OQC 804202146 ENCODE Processing Pipeline bff0807e5d07472793642f1cb2f307d1 https://www.encodeproject.org/files/ENCFF636TMC/@@download/ENCFF636TMC.bigWig hg19 released borderline replicate concordance, low read depth, antibody characterized with exemption, low read length ENCFF111BSU bigWig fold change over control ENCSR815ZDS ChIP-seq EFO:0002067 K562 cell line Homo sapiens SREBF1-human ENCAB000ALC DNA False 2014-07-07 ENCODE 1, 2 ENCFF295KFF, ENCFF335IPE, ENCFF592VTW, ENCFF879OQC 724984810 ENCODE Processing Pipeline 27540503bd190b5002f45d38d7a0cf6e https://www.encodeproject.org/files/ENCFF111BSU/@@download/ENCFF111BSU.bigWig hg19 released borderline replicate concordance, low read depth, antibody characterized with exemption, low read length ENCFF716GBZ bed narrowPeak peaks ENCSR815ZDS ChIP-seq EFO:0002067 K562 cell line Homo sapiens SREBF1-human ENCAB000ALC DNA False 2014-07-07 ENCODE 1 ENCFF335IPE, ENCFF592VTW 4513228 ENCODE Processing Pipeline 38f599db4f85e1edafe6c586428f50b8 https://www.encodeproject.org/files/ENCFF716GBZ/@@download/ENCFF716GBZ.bed.gz hg19 released borderline replicate concordance, low read depth, antibody characterized with exemption, low read length ENCFF554XAI bed narrowPeak peaks ENCSR815ZDS ChIP-seq EFO:0002067 K562 cell line Homo sapiens SREBF1-human ENCAB000ALC DNA False 2014-07-07 ENCODE 2 ENCFF295KFF, ENCFF879OQC 4855004 ENCODE Processing Pipeline 98de65987c0e66bbad86c88c52ff043c https://www.encodeproject.org/files/ENCFF554XAI/@@download/ENCFF554XAI.bed.gz hg19 released borderline replicate concordance, low read depth, antibody characterized with exemption, low read length ENCFF826WTJ bed narrowPeak peaks ENCSR815ZDS ChIP-seq EFO:0002067 K562 cell line Homo sapiens SREBF1-human ENCAB000ALC DNA False 2014-07-07 ENCODE 1, 2 ENCFF295KFF, ENCFF335IPE, ENCFF592VTW, ENCFF879OQC 6109573 ENCODE Processing Pipeline 852cdd025106af4eb8bcf0df3f208109 https://www.encodeproject.org/files/ENCFF826WTJ/@@download/ENCFF826WTJ.bed.gz hg19 released borderline replicate concordance, low read depth, antibody characterized with exemption, low read length ENCFF388ECN bigBed narrowPeak peaks ENCSR815ZDS ChIP-seq EFO:0002067 K562 cell line Homo sapiens SREBF1-human ENCAB000ALC DNA False 2014-07-07 ENCODE 1 ENCFF716GBZ 10550587 ENCODE Processing Pipeline 9434f3b86785ac71bb1e26e3e4689355 https://www.encodeproject.org/files/ENCFF388ECN/@@download/ENCFF388ECN.bigBed hg19 released borderline replicate concordance, low read depth, antibody characterized with exemption, low read length ENCFF127SAG bigBed narrowPeak peaks ENCSR815ZDS ChIP-seq EFO:0002067 K562 cell line Homo sapiens SREBF1-human ENCAB000ALC DNA False 2014-07-07 ENCODE 1, 2 ENCFF826WTJ 13325398 ENCODE Processing Pipeline 66c0035032560dca2c53c119264eaf9f https://www.encodeproject.org/files/ENCFF127SAG/@@download/ENCFF127SAG.bigBed hg19 released borderline replicate concordance, low read depth, antibody characterized with exemption, low read length ENCFF824CHM bigBed narrowPeak peaks ENCSR815ZDS ChIP-seq EFO:0002067 K562 cell line Homo sapiens SREBF1-human ENCAB000ALC DNA False 2014-07-07 ENCODE 2 ENCFF554XAI 10846395 ENCODE Processing Pipeline dbfcd7b322f9fa857a6455b0b18f049c https://www.encodeproject.org/files/ENCFF824CHM/@@download/ENCFF824CHM.bigBed hg19 released borderline replicate concordance, low read depth, antibody characterized with exemption, low read length ENCFF594XPS bigBed narrowPeak conservative idr thresholded peaks ENCSR815ZDS ChIP-seq EFO:0002067 K562 cell line Homo sapiens SREBF1-human ENCAB000ALC DNA False 2014-07-07 ENCODE 1, 2 ENCFF318KNL 123518 ENCODE Processing Pipeline b665c3796233eb7d70204dc5ad1dc5e3 https://www.encodeproject.org/files/ENCFF594XPS/@@download/ENCFF594XPS.bigBed hg19 released borderline replicate concordance, low read depth, antibody characterized with exemption, low read length ENCFF694QKJ bigBed narrowPeak optimal idr thresholded peaks ENCSR815ZDS ChIP-seq EFO:0002067 K562 cell line Homo sapiens SREBF1-human ENCAB000ALC DNA False 2014-07-07 ENCODE 1, 2 ENCFF985TSH 162824 ENCODE Processing Pipeline 6babe8f723ed9cccb16cea2d47b50091 https://www.encodeproject.org/files/ENCFF694QKJ/@@download/ENCFF694QKJ.bigBed hg19 released borderline replicate concordance, low read depth, antibody characterized with exemption, low read length ENCFF318KNL bed narrowPeak conservative idr thresholded peaks ENCSR815ZDS ChIP-seq EFO:0002067 K562 cell line Homo sapiens SREBF1-human ENCAB000ALC DNA False 2014-07-07 ENCODE 1, 2 ENCFF001TDO, ENCFF554XAI, ENCFF716GBZ, ENCFF826WTJ 43370 ENCODE Processing Pipeline 157b035e43c352e9bbe632cf1cac3cb2 https://www.encodeproject.org/files/ENCFF318KNL/@@download/ENCFF318KNL.bed.gz hg19 released borderline replicate concordance, low read depth, antibody characterized with exemption, low read length ENCFF985TSH bed narrowPeak optimal idr thresholded peaks ENCSR815ZDS ChIP-seq EFO:0002067 K562 cell line Homo sapiens SREBF1-human ENCAB000ALC DNA False 2014-07-07 ENCODE 1, 2 ENCFF001TDO, ENCFF554XAI, ENCFF716GBZ, ENCFF826WTJ 53139 ENCODE Processing Pipeline 5d034408cc2d73bb6d706caeaaeeb6ae https://www.encodeproject.org/files/ENCFF985TSH/@@download/ENCFF985TSH.bed.gz hg19 released borderline replicate concordance, low read depth, antibody characterized with exemption, low read length ENCFF002EEL fastq reads ENCSR815ZDS ChIP-seq EFO:0002067 K562 cell line Homo sapiens SREBF1-human ENCAB000ALC DNA False 2014-07-07 ENCODE 1 1 36 single-ended 417216273 Michael Snyder, Stanford d25f08abe0f760e9c8f1c9ec47d3d91e SRA:SRR5112118 https://www.encodeproject.org/files/ENCFF002EEL/@@download/ENCFF002EEL.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF002ECW/ released borderline replicate concordance, low read depth, antibody characterized with exemption, low read length ENCFF002EEP fastq reads ENCSR815ZDS ChIP-seq EFO:0002067 K562 cell line Homo sapiens SREBF1-human ENCAB000ALC DNA False 2014-07-07 ENCODE 2 1 36 single-ended 752441394 Michael Snyder, Stanford 240c117c3159807b60fa46f8e9a312cc SRA:SRR5112117 https://www.encodeproject.org/files/ENCFF002EEP/@@download/ENCFF002EEP.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF002ECS/ released borderline replicate concordance, low read depth, antibody characterized with exemption, low read length ENCFF295KFF bam alignments ENCSR815ZDS ChIP-seq EFO:0002067 K562 cell line Homo sapiens SREBF1-human ENCAB000ALC DNA False 2014-07-07 ENCODE 2 36 ENCFF002EEP, ENCFF807MUK 719002595 ENCODE Processing Pipeline cee112f369e8035b3c5b052084a40008 https://www.encodeproject.org/files/ENCFF295KFF/@@download/ENCFF295KFF.bam hg19 released borderline replicate concordance, low read depth, antibody characterized with exemption, low read length ENCFF592VTW bam alignments ENCSR815ZDS ChIP-seq EFO:0002067 K562 cell line Homo sapiens SREBF1-human ENCAB000ALC DNA False 2014-07-07 ENCODE 1 36 ENCFF002EEL, ENCFF807MUK 408815981 ENCODE Processing Pipeline a5054411d3fb3ae2ffb8ff6563cd00ae https://www.encodeproject.org/files/ENCFF592VTW/@@download/ENCFF592VTW.bam hg19 released borderline replicate concordance, low read depth, antibody characterized with exemption, low read length ENCFF361WUX bigWig signal p-value ENCSR815ZDS ChIP-seq EFO:0002067 K562 cell line Homo sapiens SREBF1-human ENCAB000ALC DNA False 2014-07-07 ENCODE 1 ENCFF335IPE, ENCFF592VTW 504795331 ENCODE Processing Pipeline 27e7d869041c64ab5f705f95c2781d5c https://www.encodeproject.org/files/ENCFF361WUX/@@download/ENCFF361WUX.bigWig hg19 released borderline replicate concordance, low read depth, antibody characterized with exemption, low read length ENCFF189YRZ bigWig signal p-value ENCSR815ZDS ChIP-seq EFO:0002067 K562 cell line Homo sapiens SREBF1-human ENCAB000ALC DNA False 2014-07-07 ENCODE 2 ENCFF295KFF, ENCFF879OQC 631959959 ENCODE Processing Pipeline d099cf024f31c1d4a051a943e4e2d1c6 https://www.encodeproject.org/files/ENCFF189YRZ/@@download/ENCFF189YRZ.bigWig hg19 released borderline replicate concordance, low read depth, antibody characterized with exemption, low read length ENCFF380TXL bigWig signal p-value ENCSR815ZDS ChIP-seq EFO:0002067 K562 cell line Homo sapiens SREBF1-human ENCAB000ALC DNA False 2014-07-07 ENCODE 1, 2 ENCFF295KFF, ENCFF335IPE, ENCFF592VTW, ENCFF879OQC 802949091 ENCODE Processing Pipeline e482c13745ae42ac385c5564066b158c https://www.encodeproject.org/files/ENCFF380TXL/@@download/ENCFF380TXL.bigWig hg19 archived borderline replicate concordance, low read depth, antibody characterized with exemption, low read length ENCFF032IYS bigWig fold change over control ENCSR815ZDS ChIP-seq EFO:0002067 K562 cell line Homo sapiens SREBF1-human ENCAB000ALC DNA False 2014-07-07 ENCODE 1 ENCFF335IPE, ENCFF592VTW 249838136 ENCODE Processing Pipeline 9619beccb4c6edd2f34f3fbcd5b7d764 https://www.encodeproject.org/files/ENCFF032IYS/@@download/ENCFF032IYS.bigWig hg19 released borderline replicate concordance, low read depth, antibody characterized with exemption, low read length ENCFF991VXV bigWig fold change over control ENCSR815ZDS ChIP-seq EFO:0002067 K562 cell line Homo sapiens SREBF1-human ENCAB000ALC DNA False 2014-07-07 ENCODE 2 ENCFF295KFF, ENCFF879OQC 387590850 ENCODE Processing Pipeline b26eec8da8a3713263c697f85399d2b9 https://www.encodeproject.org/files/ENCFF991VXV/@@download/ENCFF991VXV.bigWig hg19 released borderline replicate concordance, low read depth, antibody characterized with exemption, low read length ENCFF063EPQ bigWig fold change over control ENCSR815ZDS ChIP-seq EFO:0002067 K562 cell line Homo sapiens SREBF1-human ENCAB000ALC DNA False 2014-07-07 ENCODE 1, 2 ENCFF295KFF, ENCFF335IPE, ENCFF592VTW, ENCFF879OQC 730658862 ENCODE Processing Pipeline 4784cee554c28bafa165391e31e5c20f https://www.encodeproject.org/files/ENCFF063EPQ/@@download/ENCFF063EPQ.bigWig hg19 archived borderline replicate concordance, low read depth, antibody characterized with exemption, low read length ENCFF916KLD bed narrowPeak peaks ENCSR815ZDS ChIP-seq EFO:0002067 K562 cell line Homo sapiens SREBF1-human ENCAB000ALC DNA False 2014-07-07 ENCODE 2 ENCFF295KFF, ENCFF879OQC 5050350 ENCODE Processing Pipeline d8a3931ec7358fc3503f9890169714fb https://www.encodeproject.org/files/ENCFF916KLD/@@download/ENCFF916KLD.bed.gz hg19 archived borderline replicate concordance, low read depth, antibody characterized with exemption, low read length ENCFF103SAB bigBed narrowPeak peaks ENCSR815ZDS ChIP-seq EFO:0002067 K562 cell line Homo sapiens SREBF1-human ENCAB000ALC DNA False 2014-07-07 ENCODE 1 ENCFF405AOP 10750924 ENCODE Processing Pipeline d8ce81940b09486dcdbfd9751c4c5a54 https://www.encodeproject.org/files/ENCFF103SAB/@@download/ENCFF103SAB.bigBed hg19 archived borderline replicate concordance, low read depth, antibody characterized with exemption, low read length ENCFF405AOP bed narrowPeak peaks ENCSR815ZDS ChIP-seq EFO:0002067 K562 cell line Homo sapiens SREBF1-human ENCAB000ALC DNA False 2014-07-07 ENCODE 1 ENCFF335IPE, ENCFF592VTW 4718152 ENCODE Processing Pipeline 66a344d1223b1829dba0c2f3c5e1cc85 https://www.encodeproject.org/files/ENCFF405AOP/@@download/ENCFF405AOP.bed.gz hg19 archived borderline replicate concordance, low read depth, antibody characterized with exemption, low read length ENCFF085MZN bed narrowPeak peaks ENCSR815ZDS ChIP-seq EFO:0002067 K562 cell line Homo sapiens SREBF1-human ENCAB000ALC DNA False 2014-07-07 ENCODE 1, 2 ENCFF295KFF, ENCFF335IPE, ENCFF592VTW, ENCFF879OQC 6265867 ENCODE Processing Pipeline 04b57985a2d895f62d03391011084640 https://www.encodeproject.org/files/ENCFF085MZN/@@download/ENCFF085MZN.bed.gz hg19 archived borderline replicate concordance, low read depth, antibody characterized with exemption, low read length ENCFF364OIT bigBed narrowPeak peaks ENCSR815ZDS ChIP-seq EFO:0002067 K562 cell line Homo sapiens SREBF1-human ENCAB000ALC DNA False 2014-07-07 ENCODE 2 ENCFF916KLD 10977867 ENCODE Processing Pipeline 316ff9b10a27ee26d69747328b303264 https://www.encodeproject.org/files/ENCFF364OIT/@@download/ENCFF364OIT.bigBed hg19 archived borderline replicate concordance, low read depth, antibody characterized with exemption, low read length ENCFF657SYH bigBed narrowPeak peaks ENCSR815ZDS ChIP-seq EFO:0002067 K562 cell line Homo sapiens SREBF1-human ENCAB000ALC DNA False 2014-07-07 ENCODE 1, 2 ENCFF085MZN 13337226 ENCODE Processing Pipeline 6ebdc30e17bd4eb6e96d619633746022 https://www.encodeproject.org/files/ENCFF657SYH/@@download/ENCFF657SYH.bigBed hg19 archived borderline replicate concordance, low read depth, antibody characterized with exemption, low read length ENCFF252IYG bam unfiltered alignments ENCSR815ZDS ChIP-seq EFO:0002067 K562 cell line Homo sapiens SREBF1-human ENCAB000ALC DNA False 2014-07-07 ENCODE 1 36 ENCFF002EEL, ENCFF643CGH 608646302 ENCODE Processing Pipeline 92a3e50747bec3aa0e8583047637a6fc https://www.encodeproject.org/files/ENCFF252IYG/@@download/ENCFF252IYG.bam GRCh38 released borderline replicate concordance, low read depth, antibody characterized with exemption, low read length ENCFF623PVZ bam alignments ENCSR815ZDS ChIP-seq EFO:0002067 K562 cell line Homo sapiens SREBF1-human ENCAB000ALC DNA False 2014-07-07 ENCODE 1 36 ENCFF002EEL, ENCFF643CGH 408369030 ENCODE Processing Pipeline 90f97d5387748745914c1474a79e5a79 https://www.encodeproject.org/files/ENCFF623PVZ/@@download/ENCFF623PVZ.bam GRCh38 released borderline replicate concordance, low read depth, antibody characterized with exemption, low read length ENCFF012STR bam unfiltered alignments ENCSR815ZDS ChIP-seq EFO:0002067 K562 cell line Homo sapiens SREBF1-human ENCAB000ALC DNA False 2014-07-07 ENCODE 2 36 ENCFF002EEP, ENCFF643CGH 1083412119 ENCODE Processing Pipeline 2270dde6e4959855dd1d131bf1fe863f https://www.encodeproject.org/files/ENCFF012STR/@@download/ENCFF012STR.bam GRCh38 released borderline replicate concordance, low read depth, antibody characterized with exemption, low read length ENCFF405EME bam alignments ENCSR815ZDS ChIP-seq EFO:0002067 K562 cell line Homo sapiens SREBF1-human ENCAB000ALC DNA False 2014-07-07 ENCODE 2 36 ENCFF002EEP, ENCFF643CGH 718441242 ENCODE Processing Pipeline d02ed64f85f40829fcedc97b5e649267 https://www.encodeproject.org/files/ENCFF405EME/@@download/ENCFF405EME.bam GRCh38 released borderline replicate concordance, low read depth, antibody characterized with exemption, low read length ENCFF483SCA bigWig signal p-value ENCSR815ZDS ChIP-seq EFO:0002067 K562 cell line Homo sapiens SREBF1-human ENCAB000ALC DNA False 2014-07-07 ENCODE 1 ENCFF156FED, ENCFF623PVZ 454665556 ENCODE Processing Pipeline 585a40edf3c777e46b145c8e1c93a504 https://www.encodeproject.org/files/ENCFF483SCA/@@download/ENCFF483SCA.bigWig GRCh38 released borderline replicate concordance, low read depth, antibody characterized with exemption, low read length ENCFF423RTI bigWig signal p-value ENCSR815ZDS ChIP-seq EFO:0002067 K562 cell line Homo sapiens SREBF1-human ENCAB000ALC DNA False 2014-07-07 ENCODE 2 ENCFF405EME, ENCFF577FNG 604171529 ENCODE Processing Pipeline b6e87bf1e57ce6ecc97da6df15354609 https://www.encodeproject.org/files/ENCFF423RTI/@@download/ENCFF423RTI.bigWig GRCh38 released borderline replicate concordance, low read depth, antibody characterized with exemption, low read length ENCFF214AFM bigWig signal p-value ENCSR815ZDS ChIP-seq EFO:0002067 K562 cell line Homo sapiens SREBF1-human ENCAB000ALC DNA False 2014-07-07 ENCODE 1, 2 ENCFF156FED, ENCFF405EME, ENCFF577FNG, ENCFF623PVZ 939914390 ENCODE Processing Pipeline 4214494ddf36cda5e2e9593bc7fad856 https://www.encodeproject.org/files/ENCFF214AFM/@@download/ENCFF214AFM.bigWig GRCh38 released borderline replicate concordance, low read depth, antibody characterized with exemption, low read length ENCFF913QHU bigWig fold change over control ENCSR815ZDS ChIP-seq EFO:0002067 K562 cell line Homo sapiens SREBF1-human ENCAB000ALC DNA False 2014-07-07 ENCODE 2 ENCFF405EME, ENCFF577FNG 391279555 ENCODE Processing Pipeline 4971429041e1b652ef08199e22094c5d https://www.encodeproject.org/files/ENCFF913QHU/@@download/ENCFF913QHU.bigWig GRCh38 released borderline replicate concordance, low read depth, antibody characterized with exemption, low read length ENCFF610PVG bigWig fold change over control ENCSR815ZDS ChIP-seq EFO:0002067 K562 cell line Homo sapiens SREBF1-human ENCAB000ALC DNA False 2014-07-07 ENCODE 1 ENCFF156FED, ENCFF623PVZ 248371049 ENCODE Processing Pipeline 5e3f15cf627c03b1b9a6207857e9b7d7 https://www.encodeproject.org/files/ENCFF610PVG/@@download/ENCFF610PVG.bigWig GRCh38 released borderline replicate concordance, low read depth, antibody characterized with exemption, low read length ENCFF235NNS bigWig fold change over control ENCSR815ZDS ChIP-seq EFO:0002067 K562 cell line Homo sapiens SREBF1-human ENCAB000ALC DNA False 2014-07-07 ENCODE 1, 2 ENCFF156FED, ENCFF405EME, ENCFF577FNG, ENCFF623PVZ 755533458 ENCODE Processing Pipeline 0a537e2058feabb8f87a746d49c8f464 https://www.encodeproject.org/files/ENCFF235NNS/@@download/ENCFF235NNS.bigWig GRCh38 released borderline replicate concordance, low read depth, antibody characterized with exemption, low read length ENCFF068RSQ bigBed narrowPeak peaks ENCSR815ZDS ChIP-seq EFO:0002067 K562 cell line Homo sapiens SREBF1-human ENCAB000ALC DNA False 2014-07-07 ENCODE 2 ENCFF640KEE 10799717 ENCODE Processing Pipeline 579619728caff8962e9ecccca819d3f4 https://www.encodeproject.org/files/ENCFF068RSQ/@@download/ENCFF068RSQ.bigBed GRCh38 released borderline replicate concordance, low read depth, antibody characterized with exemption, low read length ENCFF410CCI bigBed narrowPeak peaks ENCSR815ZDS ChIP-seq EFO:0002067 K562 cell line Homo sapiens SREBF1-human ENCAB000ALC DNA False 2014-07-07 ENCODE 1, 2 ENCFF048AYA 13343185 ENCODE Processing Pipeline 3fd5fb77cada8548bbdcbeaf55b4aa25 https://www.encodeproject.org/files/ENCFF410CCI/@@download/ENCFF410CCI.bigBed GRCh38 released borderline replicate concordance, low read depth, antibody characterized with exemption, low read length ENCFF263ZGK bed narrowPeak peaks ENCSR815ZDS ChIP-seq EFO:0002067 K562 cell line Homo sapiens SREBF1-human ENCAB000ALC DNA False 2014-07-07 ENCODE 1 ENCFF156FED, ENCFF623PVZ 3925957 ENCODE Processing Pipeline dc36f3209359a1374c927d8e3a759431 https://www.encodeproject.org/files/ENCFF263ZGK/@@download/ENCFF263ZGK.bed.gz GRCh38 released borderline replicate concordance, low read depth, antibody characterized with exemption, low read length ENCFF640KEE bed narrowPeak peaks ENCSR815ZDS ChIP-seq EFO:0002067 K562 cell line Homo sapiens SREBF1-human ENCAB000ALC DNA False 2014-07-07 ENCODE 2 ENCFF405EME, ENCFF577FNG 4805387 ENCODE Processing Pipeline 47e0dffe82e992e006d488a2a361640e https://www.encodeproject.org/files/ENCFF640KEE/@@download/ENCFF640KEE.bed.gz GRCh38 released borderline replicate concordance, low read depth, antibody characterized with exemption, low read length ENCFF048AYA bed narrowPeak peaks ENCSR815ZDS ChIP-seq EFO:0002067 K562 cell line Homo sapiens SREBF1-human ENCAB000ALC DNA False 2014-07-07 ENCODE 1, 2 ENCFF156FED, ENCFF405EME, ENCFF577FNG, ENCFF623PVZ 5992781 ENCODE Processing Pipeline 4b4dea4e62cefbb636697aa4cbefad4c https://www.encodeproject.org/files/ENCFF048AYA/@@download/ENCFF048AYA.bed.gz GRCh38 released borderline replicate concordance, low read depth, antibody characterized with exemption, low read length ENCFF855CCX bigBed narrowPeak peaks ENCSR815ZDS ChIP-seq EFO:0002067 K562 cell line Homo sapiens SREBF1-human ENCAB000ALC DNA False 2014-07-07 ENCODE 1 ENCFF263ZGK 9770095 ENCODE Processing Pipeline 879893397331642b93df78deabd09357 https://www.encodeproject.org/files/ENCFF855CCX/@@download/ENCFF855CCX.bigBed GRCh38 released borderline replicate concordance, low read depth, antibody characterized with exemption, low read length ENCFF777MYW bed narrowPeak optimal idr thresholded peaks ENCSR815ZDS ChIP-seq EFO:0002067 K562 cell line Homo sapiens SREBF1-human ENCAB000ALC DNA False 2014-07-07 ENCODE 1, 2 ENCFF048AYA, ENCFF263ZGK, ENCFF419RSJ, ENCFF640KEE 53894 ENCODE Processing Pipeline 003e9a52b0eec20cf37812002d52be38 https://www.encodeproject.org/files/ENCFF777MYW/@@download/ENCFF777MYW.bed.gz GRCh38 released borderline replicate concordance, low read depth, antibody characterized with exemption, low read length ENCFF970OAN bigBed narrowPeak conservative idr thresholded peaks ENCSR815ZDS ChIP-seq EFO:0002067 K562 cell line Homo sapiens SREBF1-human ENCAB000ALC DNA False 2014-07-07 ENCODE 1, 2 ENCFF869JTA 124741 ENCODE Processing Pipeline 6cf997f96308ae3c7ba85b32938153e1 https://www.encodeproject.org/files/ENCFF970OAN/@@download/ENCFF970OAN.bigBed GRCh38 released borderline replicate concordance, low read depth, antibody characterized with exemption, low read length ENCFF869JTA bed narrowPeak conservative idr thresholded peaks ENCSR815ZDS ChIP-seq EFO:0002067 K562 cell line Homo sapiens SREBF1-human ENCAB000ALC DNA False 2014-07-07 ENCODE 1, 2 ENCFF048AYA, ENCFF263ZGK, ENCFF419RSJ, ENCFF640KEE 43284 ENCODE Processing Pipeline 81e2776d6b285184b32b8897dab11d2b https://www.encodeproject.org/files/ENCFF869JTA/@@download/ENCFF869JTA.bed.gz GRCh38 released borderline replicate concordance, low read depth, antibody characterized with exemption, low read length ENCFF031GIL bigBed narrowPeak optimal idr thresholded peaks ENCSR815ZDS ChIP-seq EFO:0002067 K562 cell line Homo sapiens SREBF1-human ENCAB000ALC DNA False 2014-07-07 ENCODE 1, 2 ENCFF777MYW 140589 ENCODE Processing Pipeline dbfd42ef8f27fb7c8bcaf512c4d1d0a2 https://www.encodeproject.org/files/ENCFF031GIL/@@download/ENCFF031GIL.bigBed GRCh38 released borderline replicate concordance, low read depth, antibody characterized with exemption, low read length ENCFF708WDH bed narrowPeak conservative idr thresholded peaks ENCSR815ZDS ChIP-seq EFO:0002067 K562 cell line Homo sapiens SREBF1-human ENCAB000ALC DNA False 2014-07-07 ENCODE 1, 2 ENCFF001TDO, ENCFF085MZN, ENCFF405AOP, ENCFF916KLD 36945 ENCODE Processing Pipeline 8a05d236c3a99789165ed12aa6b2c599 https://www.encodeproject.org/files/ENCFF708WDH/@@download/ENCFF708WDH.bed.gz hg19 archived borderline replicate concordance, low read depth, antibody characterized with exemption, low read length ENCFF653VOQ bigBed narrowPeak conservative idr thresholded peaks ENCSR815ZDS ChIP-seq EFO:0002067 K562 cell line Homo sapiens SREBF1-human ENCAB000ALC DNA False 2014-07-07 ENCODE 1, 2 ENCFF708WDH 114847 ENCODE Processing Pipeline 048d557dd673150051bcf124d6f2c5c3 https://www.encodeproject.org/files/ENCFF653VOQ/@@download/ENCFF653VOQ.bigBed hg19 archived borderline replicate concordance, low read depth, antibody characterized with exemption, low read length ENCFF890YEO bed narrowPeak optimal idr thresholded peaks ENCSR815ZDS ChIP-seq EFO:0002067 K562 cell line Homo sapiens SREBF1-human ENCAB000ALC DNA False 2014-07-07 ENCODE 1, 2 ENCFF001TDO, ENCFF085MZN, ENCFF405AOP, ENCFF916KLD 46140 ENCODE Processing Pipeline c0e06ca08ca05f128423079002568224 https://www.encodeproject.org/files/ENCFF890YEO/@@download/ENCFF890YEO.bed.gz hg19 archived borderline replicate concordance, low read depth, antibody characterized with exemption, low read length ENCFF133QAV bigBed narrowPeak optimal idr thresholded peaks ENCSR815ZDS ChIP-seq EFO:0002067 K562 cell line Homo sapiens SREBF1-human ENCAB000ALC DNA False 2014-07-07 ENCODE 1, 2 ENCFF890YEO 128074 ENCODE Processing Pipeline b4160109a98a6cbf3d93e7b1baa12cfe https://www.encodeproject.org/files/ENCFF133QAV/@@download/ENCFF133QAV.bigBed hg19 archived borderline replicate concordance, low read depth, antibody characterized with exemption, low read length ENCFF190HSK bam unfiltered alignments ENCSR364SNE ChIP-seq EFO:0002067 K562 cell line Homo sapiens POU5F1-human ENCAB000BDY DNA False 2014-07-07 ENCODE 1 36 ENCFF002EEQ, ENCFF807MUK 1096859858 ENCODE Processing Pipeline e6e0456c81be86bd4d90013e656fa82b https://www.encodeproject.org/files/ENCFF190HSK/@@download/ENCFF190HSK.bam hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO partially characterized antibody ENCFF455CEC bam unfiltered alignments ENCSR364SNE ChIP-seq EFO:0002067 K562 cell line Homo sapiens POU5F1-human ENCAB000BDY DNA False 2014-07-07 ENCODE 2 36 ENCFF002EEN, ENCFF807MUK 854566251 ENCODE Processing Pipeline 430fa20c8c9568709495ad73a4e27089 https://www.encodeproject.org/files/ENCFF455CEC/@@download/ENCFF455CEC.bam hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO partially characterized antibody ENCFF002EEN fastq reads ENCSR364SNE ChIP-seq EFO:0002067 K562 cell line Homo sapiens POU5F1-human ENCAB000BDY DNA False 2014-07-07 ENCODE 2 1 36 single-ended 602183578 Michael Snyder, Stanford ac9c8d993b7031fe8fc2a3265637f029 https://www.encodeproject.org/files/ENCFF002EEN/@@download/ENCFF002EEN.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF002ECS/ released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO partially characterized antibody ENCFF002EEQ fastq reads ENCSR364SNE ChIP-seq EFO:0002067 K562 cell line Homo sapiens POU5F1-human ENCAB000BDY DNA False 2014-07-07 ENCODE 1 1 36 single-ended 765378566 Michael Snyder, Stanford 7f2792f1c0f0d915111a6a3978f40220 https://www.encodeproject.org/files/ENCFF002EEQ/@@download/ENCFF002EEQ.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF002ECW/ released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO partially characterized antibody ENCFF252WJR bam alignments ENCSR364SNE ChIP-seq EFO:0002067 K562 cell line Homo sapiens POU5F1-human ENCAB000BDY DNA False 2014-07-07 ENCODE 2 36 ENCFF002EEN, ENCFF807MUK 528229056 ENCODE Processing Pipeline 6730353cb78bc9568ed4cb4156f3b64e https://www.encodeproject.org/files/ENCFF252WJR/@@download/ENCFF252WJR.bam hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO partially characterized antibody ENCFF032JWA bam alignments ENCSR364SNE ChIP-seq EFO:0002067 K562 cell line Homo sapiens POU5F1-human ENCAB000BDY DNA False 2014-07-07 ENCODE 1 36 ENCFF002EEQ, ENCFF807MUK 732122949 ENCODE Processing Pipeline b8f8aee503fd73ad8ec77495365b083d https://www.encodeproject.org/files/ENCFF032JWA/@@download/ENCFF032JWA.bam hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO partially characterized antibody ENCFF370JBU bigWig signal p-value ENCSR364SNE ChIP-seq EFO:0002067 K562 cell line Homo sapiens POU5F1-human ENCAB000BDY DNA False 2014-07-07 ENCODE 2 ENCFF252WJR, ENCFF879OQC 480038742 ENCODE Processing Pipeline d0631d27434b7ea5634901710dcb8eae https://www.encodeproject.org/files/ENCFF370JBU/@@download/ENCFF370JBU.bigWig hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO partially characterized antibody ENCFF953XUJ bigWig fold change over control ENCSR364SNE ChIP-seq EFO:0002067 K562 cell line Homo sapiens POU5F1-human ENCAB000BDY DNA False 2014-07-07 ENCODE 2 ENCFF252WJR, ENCFF879OQC 322765175 ENCODE Processing Pipeline 9709e150e02fb2fa1bf6fbf5fe012562 https://www.encodeproject.org/files/ENCFF953XUJ/@@download/ENCFF953XUJ.bigWig hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO partially characterized antibody ENCFF412BMV bam unfiltered alignments ENCSR364SNE ChIP-seq EFO:0002067 K562 cell line Homo sapiens POU5F1-human ENCAB000BDY DNA False 2014-07-07 ENCODE 1 36 ENCFF002EEQ, ENCFF643CGH 1101668734 ENCODE Processing Pipeline b4d7cb51b0c66d17dcf1f300928f0818 https://www.encodeproject.org/files/ENCFF412BMV/@@download/ENCFF412BMV.bam GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO partially characterized antibody ENCFF613SVQ bam unfiltered alignments ENCSR364SNE ChIP-seq EFO:0002067 K562 cell line Homo sapiens POU5F1-human ENCAB000BDY DNA False 2014-07-07 ENCODE 2 36 ENCFF002EEN, ENCFF643CGH 858519702 ENCODE Processing Pipeline 25c6aa4947f533b70318051018ffdb80 https://www.encodeproject.org/files/ENCFF613SVQ/@@download/ENCFF613SVQ.bam GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO partially characterized antibody ENCFF645RWA bam alignments ENCSR364SNE ChIP-seq EFO:0002067 K562 cell line Homo sapiens POU5F1-human ENCAB000BDY DNA False 2014-07-07 ENCODE 2 36 ENCFF002EEN, ENCFF643CGH 527847825 ENCODE Processing Pipeline 820f487652c693befbce97a1a5849fb4 https://www.encodeproject.org/files/ENCFF645RWA/@@download/ENCFF645RWA.bam GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO partially characterized antibody ENCFF178ZLZ bam alignments ENCSR364SNE ChIP-seq EFO:0002067 K562 cell line Homo sapiens POU5F1-human ENCAB000BDY DNA False 2014-07-07 ENCODE 1 36 ENCFF002EEQ, ENCFF643CGH 731573956 ENCODE Processing Pipeline 3c61b4fa870f6363f153cf5d690ad778 https://www.encodeproject.org/files/ENCFF178ZLZ/@@download/ENCFF178ZLZ.bam GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO partially characterized antibody ENCFF412NWE bigWig signal p-value ENCSR364SNE ChIP-seq EFO:0002067 K562 cell line Homo sapiens POU5F1-human ENCAB000BDY DNA False 2014-07-07 ENCODE 1 ENCFF156FED, ENCFF178ZLZ 598692340 ENCODE Processing Pipeline e1a649e6a64b8648c37165f2ff85bf58 https://www.encodeproject.org/files/ENCFF412NWE/@@download/ENCFF412NWE.bigWig GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO partially characterized antibody ENCFF169IYA bigWig signal p-value ENCSR364SNE ChIP-seq EFO:0002067 K562 cell line Homo sapiens POU5F1-human ENCAB000BDY DNA False 2014-07-07 ENCODE 1, 2 ENCFF156FED, ENCFF178ZLZ, ENCFF577FNG, ENCFF645RWA 833948437 ENCODE Processing Pipeline 8adb50f90e56a6b4f15d349ef5cca91e https://www.encodeproject.org/files/ENCFF169IYA/@@download/ENCFF169IYA.bigWig GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO partially characterized antibody ENCFF662PBS bigWig signal p-value ENCSR364SNE ChIP-seq EFO:0002067 K562 cell line Homo sapiens POU5F1-human ENCAB000BDY DNA False 2014-07-07 ENCODE 2 ENCFF577FNG, ENCFF645RWA 472342464 ENCODE Processing Pipeline b71584553908cb118066664eb6188dea https://www.encodeproject.org/files/ENCFF662PBS/@@download/ENCFF662PBS.bigWig GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO partially characterized antibody ENCFF497TNF bigWig fold change over control ENCSR364SNE ChIP-seq EFO:0002067 K562 cell line Homo sapiens POU5F1-human ENCAB000BDY DNA False 2014-07-07 ENCODE 1 ENCFF156FED, ENCFF178ZLZ 424805949 ENCODE Processing Pipeline d03559551e517b2258acb459700e2a8c https://www.encodeproject.org/files/ENCFF497TNF/@@download/ENCFF497TNF.bigWig GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO partially characterized antibody ENCFF444IFN bigWig fold change over control ENCSR364SNE ChIP-seq EFO:0002067 K562 cell line Homo sapiens POU5F1-human ENCAB000BDY DNA False 2014-07-07 ENCODE 2 ENCFF577FNG, ENCFF645RWA 322206722 ENCODE Processing Pipeline 68c564636914bca9065eb3e5f9ba87c7 https://www.encodeproject.org/files/ENCFF444IFN/@@download/ENCFF444IFN.bigWig GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO partially characterized antibody ENCFF906LPL bigWig fold change over control ENCSR364SNE ChIP-seq EFO:0002067 K562 cell line Homo sapiens POU5F1-human ENCAB000BDY DNA False 2014-07-07 ENCODE 1, 2 ENCFF156FED, ENCFF178ZLZ, ENCFF577FNG, ENCFF645RWA 856039973 ENCODE Processing Pipeline 9f16c9a02df3378d23bf8b3a8aef01f8 https://www.encodeproject.org/files/ENCFF906LPL/@@download/ENCFF906LPL.bigWig GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO partially characterized antibody ENCFF830NUK bed narrowPeak peaks ENCSR364SNE ChIP-seq EFO:0002067 K562 cell line Homo sapiens POU5F1-human ENCAB000BDY DNA False 2014-07-07 ENCODE 1 ENCFF156FED, ENCFF178ZLZ 4550083 ENCODE Processing Pipeline 1d22768e399fa68a91f676ed08d04f79 https://www.encodeproject.org/files/ENCFF830NUK/@@download/ENCFF830NUK.bed.gz GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO partially characterized antibody ENCFF439PCX bigBed narrowPeak peaks ENCSR364SNE ChIP-seq EFO:0002067 K562 cell line Homo sapiens POU5F1-human ENCAB000BDY DNA False 2014-07-07 ENCODE 1 ENCFF830NUK 10815540 ENCODE Processing Pipeline da861fc8d9921f06514b615dcd9e38a2 https://www.encodeproject.org/files/ENCFF439PCX/@@download/ENCFF439PCX.bigBed GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO partially characterized antibody ENCFF419TZM bed narrowPeak peaks ENCSR364SNE ChIP-seq EFO:0002067 K562 cell line Homo sapiens POU5F1-human ENCAB000BDY DNA False 2014-07-07 ENCODE 2 ENCFF577FNG, ENCFF645RWA 3959022 ENCODE Processing Pipeline b8629234572b6f5ba4ce93b129746849 https://www.encodeproject.org/files/ENCFF419TZM/@@download/ENCFF419TZM.bed.gz GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO partially characterized antibody ENCFF786LNG bigBed narrowPeak peaks ENCSR364SNE ChIP-seq EFO:0002067 K562 cell line Homo sapiens POU5F1-human ENCAB000BDY DNA False 2014-07-07 ENCODE 1, 2 ENCFF867EKJ 11319006 ENCODE Processing Pipeline aa43b5ccd2d97647571484cfe36231c8 https://www.encodeproject.org/files/ENCFF786LNG/@@download/ENCFF786LNG.bigBed GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO partially characterized antibody ENCFF692JCC bed narrowPeak conservative idr thresholded peaks ENCSR364SNE ChIP-seq EFO:0002067 K562 cell line Homo sapiens POU5F1-human ENCAB000BDY DNA False 2014-07-07 ENCODE 1, 2 ENCFF419RSJ, ENCFF419TZM, ENCFF830NUK, ENCFF867EKJ 25940 ENCODE Processing Pipeline d6222009d7edc5f5abcacac82fdec624 https://www.encodeproject.org/files/ENCFF692JCC/@@download/ENCFF692JCC.bed.gz GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO partially characterized antibody ENCFF867EKJ bed narrowPeak peaks ENCSR364SNE ChIP-seq EFO:0002067 K562 cell line Homo sapiens POU5F1-human ENCAB000BDY DNA False 2014-07-07 ENCODE 1, 2 ENCFF156FED, ENCFF178ZLZ, ENCFF577FNG, ENCFF645RWA 5623888 ENCODE Processing Pipeline f97f44977f283087288d69206cbdaf33 https://www.encodeproject.org/files/ENCFF867EKJ/@@download/ENCFF867EKJ.bed.gz GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO partially characterized antibody ENCFF290NTC bigBed narrowPeak peaks ENCSR364SNE ChIP-seq EFO:0002067 K562 cell line Homo sapiens POU5F1-human ENCAB000BDY DNA False 2014-07-07 ENCODE 2 ENCFF419TZM 10346379 ENCODE Processing Pipeline 91ef1a9b38615e55b6b4f6ca9583fcd8 https://www.encodeproject.org/files/ENCFF290NTC/@@download/ENCFF290NTC.bigBed GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO partially characterized antibody ENCFF208QKB bigBed narrowPeak conservative idr thresholded peaks ENCSR364SNE ChIP-seq EFO:0002067 K562 cell line Homo sapiens POU5F1-human ENCAB000BDY DNA False 2014-07-07 ENCODE 1, 2 ENCFF692JCC 84239 ENCODE Processing Pipeline 9310ee5396fd8256aad0d3c0fbb478a9 https://www.encodeproject.org/files/ENCFF208QKB/@@download/ENCFF208QKB.bigBed GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO partially characterized antibody ENCFF814QPF bed narrowPeak optimal idr thresholded peaks ENCSR364SNE ChIP-seq EFO:0002067 K562 cell line Homo sapiens POU5F1-human ENCAB000BDY DNA False 2014-07-07 ENCODE 1, 2 ENCFF419RSJ, ENCFF419TZM, ENCFF830NUK, ENCFF867EKJ 38828 ENCODE Processing Pipeline 6efe277e840603535c2d355e3e357386 https://www.encodeproject.org/files/ENCFF814QPF/@@download/ENCFF814QPF.bed.gz GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO partially characterized antibody ENCFF037CCA bigBed narrowPeak optimal idr thresholded peaks ENCSR364SNE ChIP-seq EFO:0002067 K562 cell line Homo sapiens POU5F1-human ENCAB000BDY DNA False 2014-07-07 ENCODE 1, 2 ENCFF814QPF 120938 ENCODE Processing Pipeline d84f7e8cfe7fbcc73b941ce8b014423c https://www.encodeproject.org/files/ENCFF037CCA/@@download/ENCFF037CCA.bigBed GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO partially characterized antibody ENCFF738HFH bigWig signal p-value ENCSR364SNE ChIP-seq EFO:0002067 K562 cell line Homo sapiens POU5F1-human ENCAB000BDY DNA False 2014-07-07 ENCODE 1 ENCFF032JWA, ENCFF335IPE 517790491 ENCODE Processing Pipeline 94bbb130390e912b8fedff237b6e9eaa https://www.encodeproject.org/files/ENCFF738HFH/@@download/ENCFF738HFH.bigWig hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO partially characterized antibody ENCFF479BLX bigWig signal p-value ENCSR364SNE ChIP-seq EFO:0002067 K562 cell line Homo sapiens POU5F1-human ENCAB000BDY DNA False 2014-07-07 ENCODE 1, 2 ENCFF032JWA, ENCFF252WJR, ENCFF335IPE, ENCFF879OQC 955443108 ENCODE Processing Pipeline 47a5be6e1ae4ffe64e7001290d328508 https://www.encodeproject.org/files/ENCFF479BLX/@@download/ENCFF479BLX.bigWig hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO partially characterized antibody ENCFF098LLO bigWig fold change over control ENCSR364SNE ChIP-seq EFO:0002067 K562 cell line Homo sapiens POU5F1-human ENCAB000BDY DNA False 2014-07-07 ENCODE 1 ENCFF032JWA, ENCFF335IPE 420926377 ENCODE Processing Pipeline 0b7383f64928687ed7f49ca8071bc426 https://www.encodeproject.org/files/ENCFF098LLO/@@download/ENCFF098LLO.bigWig hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO partially characterized antibody ENCFF579RNC bigWig fold change over control ENCSR364SNE ChIP-seq EFO:0002067 K562 cell line Homo sapiens POU5F1-human ENCAB000BDY DNA False 2014-07-07 ENCODE 1, 2 ENCFF032JWA, ENCFF252WJR, ENCFF335IPE, ENCFF879OQC 836546443 ENCODE Processing Pipeline 61a2cb1db60eb0889a44fc1604ea6262 https://www.encodeproject.org/files/ENCFF579RNC/@@download/ENCFF579RNC.bigWig hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO partially characterized antibody ENCFF768INF bed narrowPeak peaks ENCSR364SNE ChIP-seq EFO:0002067 K562 cell line Homo sapiens POU5F1-human ENCAB000BDY DNA False 2014-07-07 ENCODE 1 ENCFF032JWA, ENCFF335IPE 4634504 ENCODE Processing Pipeline 60e806c1ceb638a3a0c87f1778337a5c https://www.encodeproject.org/files/ENCFF768INF/@@download/ENCFF768INF.bed.gz hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO partially characterized antibody ENCFF705MDG bed narrowPeak peaks ENCSR364SNE ChIP-seq EFO:0002067 K562 cell line Homo sapiens POU5F1-human ENCAB000BDY DNA False 2014-07-07 ENCODE 2 ENCFF252WJR, ENCFF879OQC 3785736 ENCODE Processing Pipeline 6905e36337bfbfc3113c08a7dce94ecd https://www.encodeproject.org/files/ENCFF705MDG/@@download/ENCFF705MDG.bed.gz hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO partially characterized antibody ENCFF982FBX bigBed narrowPeak peaks ENCSR364SNE ChIP-seq EFO:0002067 K562 cell line Homo sapiens POU5F1-human ENCAB000BDY DNA False 2014-07-07 ENCODE 1 ENCFF768INF 10817727 ENCODE Processing Pipeline b9e5a0ceb403240d5a8137808d47d714 https://www.encodeproject.org/files/ENCFF982FBX/@@download/ENCFF982FBX.bigBed hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO partially characterized antibody ENCFF272EQO bed narrowPeak peaks ENCSR364SNE ChIP-seq EFO:0002067 K562 cell line Homo sapiens POU5F1-human ENCAB000BDY DNA False 2014-07-07 ENCODE 1, 2 ENCFF032JWA, ENCFF252WJR, ENCFF335IPE, ENCFF879OQC 5706825 ENCODE Processing Pipeline 1958202674fdc72b78f63b1d6f780df9 https://www.encodeproject.org/files/ENCFF272EQO/@@download/ENCFF272EQO.bed.gz hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO partially characterized antibody ENCFF316DIO bigBed narrowPeak peaks ENCSR364SNE ChIP-seq EFO:0002067 K562 cell line Homo sapiens POU5F1-human ENCAB000BDY DNA False 2014-07-07 ENCODE 2 ENCFF705MDG 8204274 ENCODE Processing Pipeline 55052cc7085408bc68a4e96c92fda771 https://www.encodeproject.org/files/ENCFF316DIO/@@download/ENCFF316DIO.bigBed hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO partially characterized antibody ENCFF963JFK bigBed narrowPeak peaks ENCSR364SNE ChIP-seq EFO:0002067 K562 cell line Homo sapiens POU5F1-human ENCAB000BDY DNA False 2014-07-07 ENCODE 1, 2 ENCFF272EQO 11296143 ENCODE Processing Pipeline 51f31eb6a279833c463f3e650b36bdbe https://www.encodeproject.org/files/ENCFF963JFK/@@download/ENCFF963JFK.bigBed hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO partially characterized antibody ENCFF577BMW bed narrowPeak conservative idr thresholded peaks ENCSR364SNE ChIP-seq EFO:0002067 K562 cell line Homo sapiens POU5F1-human ENCAB000BDY DNA False 2014-07-07 ENCODE 1, 2 ENCFF001TDO, ENCFF272EQO, ENCFF705MDG, ENCFF768INF 27117 ENCODE Processing Pipeline 340b209e0ccc411a758b45101af0a2f7 https://www.encodeproject.org/files/ENCFF577BMW/@@download/ENCFF577BMW.bed.gz hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO partially characterized antibody ENCFF059TVQ bigBed narrowPeak conservative idr thresholded peaks ENCSR364SNE ChIP-seq EFO:0002067 K562 cell line Homo sapiens POU5F1-human ENCAB000BDY DNA False 2014-07-07 ENCODE 1, 2 ENCFF577BMW 100934 ENCODE Processing Pipeline 7ceba259003d35dd4a392bc1f17f002b https://www.encodeproject.org/files/ENCFF059TVQ/@@download/ENCFF059TVQ.bigBed hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO partially characterized antibody ENCFF387HQP bigBed narrowPeak optimal idr thresholded peaks ENCSR364SNE ChIP-seq EFO:0002067 K562 cell line Homo sapiens POU5F1-human ENCAB000BDY DNA False 2014-07-07 ENCODE 1, 2 ENCFF990CFV 123303 ENCODE Processing Pipeline a31ce5c3d9f0a4bba6de835f6a4f0c01 https://www.encodeproject.org/files/ENCFF387HQP/@@download/ENCFF387HQP.bigBed hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO partially characterized antibody ENCFF990CFV bed narrowPeak optimal idr thresholded peaks ENCSR364SNE ChIP-seq EFO:0002067 K562 cell line Homo sapiens POU5F1-human ENCAB000BDY DNA False 2014-07-07 ENCODE 1, 2 ENCFF001TDO, ENCFF272EQO, ENCFF705MDG, ENCFF768INF 41921 ENCODE Processing Pipeline 8be2419d12baba94256451bb4acfde78 https://www.encodeproject.org/files/ENCFF990CFV/@@download/ENCFF990CFV.bed.gz hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO partially characterized antibody ENCFF188WFI bam unfiltered alignments ENCSR011NOZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF407-human ENCAB222KVZ DNA False 2016-11-10 ENCODE 2 100 ENCFF678SZB, ENCFF807MUK, ENCFF864KXI 5494381775 ENCODE Processing Pipeline 4464ee3ca2c5484dc564066ec9df951c https://www.encodeproject.org/files/ENCFF188WFI/@@download/ENCFF188WFI.bam hg19 released borderline replicate concordance, low read depth ENCFF736CXI bam unfiltered alignments ENCSR011NOZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF407-human ENCAB222KVZ DNA False 2016-11-10 ENCODE 1 100 ENCFF253FCU, ENCFF379LAP, ENCFF807MUK 4559901523 ENCODE Processing Pipeline 2139e76752e415e82372c62f56794c24 https://www.encodeproject.org/files/ENCFF736CXI/@@download/ENCFF736CXI.bam hg19 released borderline replicate concordance, low read depth ENCFF253FCU fastq reads ENCSR011NOZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF407-human ENCAB222KVZ DNA False 2016-11-10 ENCODE 1 1 100 paired-ended 2 ENCFF379LAP 2095711892 Michael Snyder, Stanford 76947108507c94a1aaf5d47effba1b15 SRA:SRR5112396 https://www.encodeproject.org/files/ENCFF253FCU/@@download/ENCFF253FCU.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFA/ released borderline replicate concordance, low read depth ENCFF678SZB fastq reads ENCSR011NOZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF407-human ENCAB222KVZ DNA False 2016-11-10 ENCODE 2 1 100 paired-ended 2 ENCFF864KXI 2586700843 Michael Snyder, Stanford da898d166b96e7842dd199753a91e67f SRA:SRR5112397 https://www.encodeproject.org/files/ENCFF678SZB/@@download/ENCFF678SZB.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFH/ released borderline replicate concordance, low read depth ENCFF864KXI fastq reads ENCSR011NOZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF407-human ENCAB222KVZ DNA False 2016-11-10 ENCODE 2 1 100 paired-ended 1 ENCFF678SZB 2511605857 Michael Snyder, Stanford af6866740d80c0d7bdccab6d98986982 SRA:SRR5112397 https://www.encodeproject.org/files/ENCFF864KXI/@@download/ENCFF864KXI.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFF/ released borderline replicate concordance, low read depth ENCFF379LAP fastq reads ENCSR011NOZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF407-human ENCAB222KVZ DNA False 2016-11-10 ENCODE 1 1 100 paired-ended 1 ENCFF253FCU 2064200638 Michael Snyder, Stanford dafabca98d061944e6acd7e57cae7e24 SRA:SRR5112396 https://www.encodeproject.org/files/ENCFF379LAP/@@download/ENCFF379LAP.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFD/ released borderline replicate concordance, low read depth ENCFF554KBV bam alignments ENCSR011NOZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF407-human ENCAB222KVZ DNA False 2016-11-10 ENCODE 2 100 ENCFF678SZB, ENCFF807MUK, ENCFF864KXI 4204910819 ENCODE Processing Pipeline 7adfcc4afd59c694a1038382bc1598bf https://www.encodeproject.org/files/ENCFF554KBV/@@download/ENCFF554KBV.bam hg19 released borderline replicate concordance, low read depth ENCFF324TIY bam alignments ENCSR011NOZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF407-human ENCAB222KVZ DNA False 2016-11-10 ENCODE 1 100 ENCFF253FCU, ENCFF379LAP, ENCFF807MUK 3639622578 ENCODE Processing Pipeline e8654f2fe2fd3c47b94f4ecbe8eb1f86 https://www.encodeproject.org/files/ENCFF324TIY/@@download/ENCFF324TIY.bam hg19 released borderline replicate concordance, low read depth ENCFF408RVR bigWig signal p-value ENCSR011NOZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF407-human ENCAB222KVZ DNA False 2016-11-10 ENCODE 1 ENCFF051LWI, ENCFF324TIY 963499281 ENCODE Processing Pipeline 4333cb8bbfaf87941473938305994570 https://www.encodeproject.org/files/ENCFF408RVR/@@download/ENCFF408RVR.bigWig hg19 released borderline replicate concordance, low read depth ENCFF974VIC bigWig signal p-value ENCSR011NOZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF407-human ENCAB222KVZ DNA False 2016-11-10 ENCODE 2 ENCFF554KBV, ENCFF581ZJL 1044245176 ENCODE Processing Pipeline f20e3c39a6b63107079a9a3d0e60e1aa https://www.encodeproject.org/files/ENCFF974VIC/@@download/ENCFF974VIC.bigWig hg19 released borderline replicate concordance, low read depth ENCFF813RCK bigWig fold change over control ENCSR011NOZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF407-human ENCAB222KVZ DNA False 2016-11-10 ENCODE 2 ENCFF554KBV, ENCFF581ZJL 1144440881 ENCODE Processing Pipeline b6b852aca839b882f4d165e680874bbd https://www.encodeproject.org/files/ENCFF813RCK/@@download/ENCFF813RCK.bigWig hg19 released borderline replicate concordance, low read depth ENCFF759SUU bigWig fold change over control ENCSR011NOZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF407-human ENCAB222KVZ DNA False 2016-11-10 ENCODE 1 ENCFF051LWI, ENCFF324TIY 1032612383 ENCODE Processing Pipeline 4ad22b6dc5b3398a1d0d832f205c9cda https://www.encodeproject.org/files/ENCFF759SUU/@@download/ENCFF759SUU.bigWig hg19 released borderline replicate concordance, low read depth ENCFF157NIA bigWig signal p-value ENCSR011NOZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF407-human ENCAB222KVZ DNA False 2016-11-10 ENCODE 1, 2 ENCFF051LWI, ENCFF324TIY, ENCFF554KBV, ENCFF581ZJL 1845666379 ENCODE Processing Pipeline 45191c04a6f1d235565fce1eb38964b2 https://www.encodeproject.org/files/ENCFF157NIA/@@download/ENCFF157NIA.bigWig hg19 released borderline replicate concordance, low read depth ENCFF972MUU bigWig fold change over control ENCSR011NOZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF407-human ENCAB222KVZ DNA False 2016-11-10 ENCODE 1, 2 ENCFF051LWI, ENCFF324TIY, ENCFF554KBV, ENCFF581ZJL 2009232325 ENCODE Processing Pipeline d0bd5dd6c6c1d64611ee98d1bde0500c https://www.encodeproject.org/files/ENCFF972MUU/@@download/ENCFF972MUU.bigWig hg19 released borderline replicate concordance, low read depth ENCFF067DNS bed narrowPeak peaks ENCSR011NOZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF407-human ENCAB222KVZ DNA False 2016-11-10 ENCODE 1, 2 ENCFF051LWI, ENCFF324TIY, ENCFF554KBV, ENCFF581ZJL 7211675 ENCODE Processing Pipeline c9ae1d1b3ddb3b60ec351321987dc636 https://www.encodeproject.org/files/ENCFF067DNS/@@download/ENCFF067DNS.bed.gz hg19 released borderline replicate concordance, low read depth ENCFF370RXL bed narrowPeak peaks ENCSR011NOZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF407-human ENCAB222KVZ DNA False 2016-11-10 ENCODE 1 ENCFF051LWI, ENCFF324TIY 6491769 ENCODE Processing Pipeline e4a41a2fa968685a3a194a553f6db1dd https://www.encodeproject.org/files/ENCFF370RXL/@@download/ENCFF370RXL.bed.gz hg19 released borderline replicate concordance, low read depth ENCFF904CJM bed narrowPeak peaks ENCSR011NOZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF407-human ENCAB222KVZ DNA False 2016-11-10 ENCODE 2 ENCFF554KBV, ENCFF581ZJL 6838004 ENCODE Processing Pipeline 8c3b46431cc070beac03de662698d275 https://www.encodeproject.org/files/ENCFF904CJM/@@download/ENCFF904CJM.bed.gz hg19 released borderline replicate concordance, low read depth ENCFF796AFL bigBed narrowPeak peaks ENCSR011NOZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF407-human ENCAB222KVZ DNA False 2016-11-10 ENCODE 2 ENCFF904CJM 13170346 ENCODE Processing Pipeline 6928a511ec0d3e5a636bbdf089c31095 https://www.encodeproject.org/files/ENCFF796AFL/@@download/ENCFF796AFL.bigBed hg19 released borderline replicate concordance, low read depth ENCFF914CVJ bigBed narrowPeak peaks ENCSR011NOZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF407-human ENCAB222KVZ DNA False 2016-11-10 ENCODE 1, 2 ENCFF067DNS 13117712 ENCODE Processing Pipeline edc65fc7b6394484232b72614ae16296 https://www.encodeproject.org/files/ENCFF914CVJ/@@download/ENCFF914CVJ.bigBed hg19 released borderline replicate concordance, low read depth ENCFF392SGW bigBed narrowPeak peaks ENCSR011NOZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF407-human ENCAB222KVZ DNA False 2016-11-10 ENCODE 1 ENCFF370RXL 11010136 ENCODE Processing Pipeline 87b367d659da0f32e6128975873cabe1 https://www.encodeproject.org/files/ENCFF392SGW/@@download/ENCFF392SGW.bigBed hg19 released borderline replicate concordance, low read depth ENCFF602CFZ bed narrowPeak optimal idr thresholded peaks ENCSR011NOZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF407-human ENCAB222KVZ DNA False 2016-11-10 ENCODE 1, 2 ENCFF001TDO, ENCFF067DNS, ENCFF370RXL, ENCFF904CJM 97867 ENCODE Processing Pipeline 514af67301c0f065646dccd0e7160e69 https://www.encodeproject.org/files/ENCFF602CFZ/@@download/ENCFF602CFZ.bed.gz hg19 released borderline replicate concordance, low read depth ENCFF571OOG bed narrowPeak conservative idr thresholded peaks ENCSR011NOZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF407-human ENCAB222KVZ DNA False 2016-11-10 ENCODE 1, 2 ENCFF001TDO, ENCFF067DNS, ENCFF370RXL, ENCFF904CJM 63769 ENCODE Processing Pipeline db5ce328093ae8f9009b94c80fb6abe4 https://www.encodeproject.org/files/ENCFF571OOG/@@download/ENCFF571OOG.bed.gz hg19 released borderline replicate concordance, low read depth ENCFF962ZZE bigBed narrowPeak optimal idr thresholded peaks ENCSR011NOZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF407-human ENCAB222KVZ DNA False 2016-11-10 ENCODE 1, 2 ENCFF602CFZ 245896 ENCODE Processing Pipeline 9627d46fcca74eb33eb327bc41315fcd https://www.encodeproject.org/files/ENCFF962ZZE/@@download/ENCFF962ZZE.bigBed hg19 released borderline replicate concordance, low read depth ENCFF035LIO bigBed narrowPeak conservative idr thresholded peaks ENCSR011NOZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF407-human ENCAB222KVZ DNA False 2016-11-10 ENCODE 1, 2 ENCFF571OOG 192012 ENCODE Processing Pipeline ce3e28bf2b67b8f47681bbba0532d4ad https://www.encodeproject.org/files/ENCFF035LIO/@@download/ENCFF035LIO.bigBed hg19 released borderline replicate concordance, low read depth ENCFF333SEC bam unfiltered alignments ENCSR011NOZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF407-human ENCAB222KVZ DNA False 2016-11-10 ENCODE 1 100 ENCFF253FCU, ENCFF379LAP, ENCFF643CGH 4562991175 ENCODE Processing Pipeline 2ac9fe77899ddbb1a79f2b25a9571a50 https://www.encodeproject.org/files/ENCFF333SEC/@@download/ENCFF333SEC.bam GRCh38 released borderline replicate concordance, low read depth ENCFF255PTJ bam unfiltered alignments ENCSR011NOZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF407-human ENCAB222KVZ DNA False 2016-11-10 ENCODE 2 100 ENCFF643CGH, ENCFF678SZB, ENCFF864KXI 5495463536 ENCODE Processing Pipeline 036e0d051eee178e45d5c51162a9a17f https://www.encodeproject.org/files/ENCFF255PTJ/@@download/ENCFF255PTJ.bam GRCh38 released borderline replicate concordance, low read depth ENCFF362TFV bam alignments ENCSR011NOZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF407-human ENCAB222KVZ DNA False 2016-11-10 ENCODE 1 100 ENCFF253FCU, ENCFF379LAP, ENCFF643CGH 3642804582 ENCODE Processing Pipeline db86e35076fb07802245438eff2e4643 https://www.encodeproject.org/files/ENCFF362TFV/@@download/ENCFF362TFV.bam GRCh38 released borderline replicate concordance, low read depth ENCFF007ALP bam alignments ENCSR011NOZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF407-human ENCAB222KVZ DNA False 2016-11-10 ENCODE 2 100 ENCFF643CGH, ENCFF678SZB, ENCFF864KXI 4210220051 ENCODE Processing Pipeline f2084e748f4db44f5c48d17d817a1a71 https://www.encodeproject.org/files/ENCFF007ALP/@@download/ENCFF007ALP.bam GRCh38 released borderline replicate concordance, low read depth ENCFF397GLR bigWig signal p-value ENCSR011NOZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF407-human ENCAB222KVZ DNA False 2016-11-10 ENCODE 1 ENCFF227IZS, ENCFF362TFV 964822749 ENCODE Processing Pipeline 52ffec5ce52442263bc1e57d9f972d5a https://www.encodeproject.org/files/ENCFF397GLR/@@download/ENCFF397GLR.bigWig GRCh38 released borderline replicate concordance, low read depth ENCFF780WPX bigWig signal p-value ENCSR011NOZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF407-human ENCAB222KVZ DNA False 2016-11-10 ENCODE 2 ENCFF007ALP, ENCFF910IKB 1214505970 ENCODE Processing Pipeline 0e6ce90ea7fc83af0940acbc52fbdee4 https://www.encodeproject.org/files/ENCFF780WPX/@@download/ENCFF780WPX.bigWig GRCh38 released borderline replicate concordance, low read depth ENCFF212JRS bigWig signal p-value ENCSR011NOZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF407-human ENCAB222KVZ DNA False 2016-11-10 ENCODE 1, 2 ENCFF007ALP, ENCFF227IZS, ENCFF362TFV, ENCFF910IKB 1856559781 ENCODE Processing Pipeline 1cf4230f9a0b2d06aed25f16ebcec460 https://www.encodeproject.org/files/ENCFF212JRS/@@download/ENCFF212JRS.bigWig GRCh38 released borderline replicate concordance, low read depth ENCFF268HLW bigWig fold change over control ENCSR011NOZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF407-human ENCAB222KVZ DNA False 2016-11-10 ENCODE 1 ENCFF227IZS, ENCFF362TFV 1032651801 ENCODE Processing Pipeline e6b27fa42bd0c45f186f0001722115ff https://www.encodeproject.org/files/ENCFF268HLW/@@download/ENCFF268HLW.bigWig GRCh38 released borderline replicate concordance, low read depth ENCFF302POL bigWig fold change over control ENCSR011NOZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF407-human ENCAB222KVZ DNA False 2016-11-10 ENCODE 2 ENCFF007ALP, ENCFF910IKB 1147646403 ENCODE Processing Pipeline 3889fdc50c8b7605c8cc9e6d7ccd3305 https://www.encodeproject.org/files/ENCFF302POL/@@download/ENCFF302POL.bigWig GRCh38 released borderline replicate concordance, low read depth ENCFF979RNH bigWig fold change over control ENCSR011NOZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF407-human ENCAB222KVZ DNA False 2016-11-10 ENCODE 1, 2 ENCFF007ALP, ENCFF227IZS, ENCFF362TFV, ENCFF910IKB 2010395217 ENCODE Processing Pipeline e012e364060595bb496008ba75b5ef3a https://www.encodeproject.org/files/ENCFF979RNH/@@download/ENCFF979RNH.bigWig GRCh38 released borderline replicate concordance, low read depth ENCFF102TJI bed narrowPeak peaks ENCSR011NOZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF407-human ENCAB222KVZ DNA False 2016-11-10 ENCODE 1 ENCFF227IZS, ENCFF362TFV 6338799 ENCODE Processing Pipeline 70b6ceeaf09d0472739ccf59f806ac42 https://www.encodeproject.org/files/ENCFF102TJI/@@download/ENCFF102TJI.bed.gz GRCh38 released borderline replicate concordance, low read depth ENCFF073ZIR bed narrowPeak peaks ENCSR011NOZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF407-human ENCAB222KVZ DNA False 2016-11-10 ENCODE 2 ENCFF007ALP, ENCFF910IKB 6716028 ENCODE Processing Pipeline b1373c1009188071f6e6569e602e0c25 https://www.encodeproject.org/files/ENCFF073ZIR/@@download/ENCFF073ZIR.bed.gz GRCh38 released borderline replicate concordance, low read depth ENCFF917IMX bed narrowPeak peaks ENCSR011NOZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF407-human ENCAB222KVZ DNA False 2016-11-10 ENCODE 1, 2 ENCFF007ALP, ENCFF227IZS, ENCFF362TFV, ENCFF910IKB 7192288 ENCODE Processing Pipeline 293af94d92f1e0394a90b63c26ca12cd https://www.encodeproject.org/files/ENCFF917IMX/@@download/ENCFF917IMX.bed.gz GRCh38 released borderline replicate concordance, low read depth ENCFF962NIK bigBed narrowPeak peaks ENCSR011NOZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF407-human ENCAB222KVZ DNA False 2016-11-10 ENCODE 1 ENCFF102TJI 11024891 ENCODE Processing Pipeline 157526967a04f8457decb651d30cd465 https://www.encodeproject.org/files/ENCFF962NIK/@@download/ENCFF962NIK.bigBed GRCh38 released borderline replicate concordance, low read depth ENCFF249XAI bigBed narrowPeak peaks ENCSR011NOZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF407-human ENCAB222KVZ DNA False 2016-11-10 ENCODE 2 ENCFF073ZIR 13167162 ENCODE Processing Pipeline f047ca4fa390740035cef21e6c26e818 https://www.encodeproject.org/files/ENCFF249XAI/@@download/ENCFF249XAI.bigBed GRCh38 released borderline replicate concordance, low read depth ENCFF127NEI bigBed narrowPeak peaks ENCSR011NOZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF407-human ENCAB222KVZ DNA False 2016-11-10 ENCODE 1, 2 ENCFF917IMX 13125236 ENCODE Processing Pipeline 3acd4e520c1c69e1a93a02ce9b31e53f https://www.encodeproject.org/files/ENCFF127NEI/@@download/ENCFF127NEI.bigBed GRCh38 released borderline replicate concordance, low read depth ENCFF467REJ bed narrowPeak conservative idr thresholded peaks ENCSR011NOZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF407-human ENCAB222KVZ DNA False 2016-11-10 ENCODE 1, 2 ENCFF073ZIR, ENCFF102TJI, ENCFF419RSJ, ENCFF917IMX 63208 ENCODE Processing Pipeline 41d8cfeea90298df4b91b6c93a714b66 https://www.encodeproject.org/files/ENCFF467REJ/@@download/ENCFF467REJ.bed.gz GRCh38 released borderline replicate concordance, low read depth ENCFF065LLO bigBed narrowPeak conservative idr thresholded peaks ENCSR011NOZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF407-human ENCAB222KVZ DNA False 2016-11-10 ENCODE 1, 2 ENCFF467REJ 192379 ENCODE Processing Pipeline 14c33d55ffa24744359c5c77d0c18bcc https://www.encodeproject.org/files/ENCFF065LLO/@@download/ENCFF065LLO.bigBed GRCh38 released borderline replicate concordance, low read depth ENCFF538GSS bed narrowPeak optimal idr thresholded peaks ENCSR011NOZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF407-human ENCAB222KVZ DNA False 2016-11-10 ENCODE 1, 2 ENCFF073ZIR, ENCFF102TJI, ENCFF419RSJ, ENCFF917IMX 101839 ENCODE Processing Pipeline de93a2419e7685898d66b352c86f0e60 https://www.encodeproject.org/files/ENCFF538GSS/@@download/ENCFF538GSS.bed.gz GRCh38 released borderline replicate concordance, low read depth ENCFF721JIE bigBed narrowPeak optimal idr thresholded peaks ENCSR011NOZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF407-human ENCAB222KVZ DNA False 2016-11-10 ENCODE 1, 2 ENCFF538GSS 252657 ENCODE Processing Pipeline 64ac5ef1d79460bb0fe3f4b016eb6553 https://www.encodeproject.org/files/ENCFF721JIE/@@download/ENCFF721JIE.bigBed GRCh38 released borderline replicate concordance, low read depth ENCFF002BEY fastq reads ENCSR272JAT ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX5-human ENCAB150NID DNA see document see document False 2014-07-07 ENCODE 1 1 50 single-ended 1335394346 Richard Myers, HAIB 44ed664e27e5574f7b47ffb992c59b2d SRA:SRR5331540 https://www.encodeproject.org/files/ENCFF002BEY/@@download/ENCFF002BEY.fastq.gz Illumina HiSeq 2000 /files/ENCFF001RVO/ released borderline replicate concordance, low read depth ENCFF002BEZ fastq reads ENCSR272JAT ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX5-human ENCAB150NID DNA see document see document False 2014-07-07 ENCODE 2 1 50 single-ended 1643310064 Richard Myers, HAIB 23c946a2956d3d0df467794080c0db89 SRA:SRR5331539 https://www.encodeproject.org/files/ENCFF002BEZ/@@download/ENCFF002BEZ.fastq.gz Illumina HiSeq 2000 /files/ENCFF002BGC/ released borderline replicate concordance, low read depth ENCFF892IPP bigWig signal p-value ENCSR272JAT ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX5-human ENCAB150NID DNA see document see document False 2014-07-07 ENCODE 2 ENCFF023YMB, ENCFF061QOJ, ENCFF135QBJ 1117587067 ENCODE Processing Pipeline 469bbc787de0a7cdb4ac1d102414f642 https://www.encodeproject.org/files/ENCFF892IPP/@@download/ENCFF892IPP.bigWig hg19 released borderline replicate concordance, low read depth ENCFF835JQA bigWig signal p-value ENCSR272JAT ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX5-human ENCAB150NID DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF023YMB, ENCFF061QOJ, ENCFF135QBJ, ENCFF454ZDW 1429616622 ENCODE Processing Pipeline 6912f95f6ee6cfb20870f9f942b040f1 https://www.encodeproject.org/files/ENCFF835JQA/@@download/ENCFF835JQA.bigWig hg19 released borderline replicate concordance, low read depth ENCFF071BKT bigWig fold change over control ENCSR272JAT ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX5-human ENCAB150NID DNA see document see document False 2014-07-07 ENCODE 2 ENCFF023YMB, ENCFF061QOJ, ENCFF135QBJ 782818948 ENCODE Processing Pipeline 4c932ab0670e1b0c29a3a6031acb829b https://www.encodeproject.org/files/ENCFF071BKT/@@download/ENCFF071BKT.bigWig hg19 released borderline replicate concordance, low read depth ENCFF014XHT bigWig fold change over control ENCSR272JAT ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX5-human ENCAB150NID DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF023YMB, ENCFF061QOJ, ENCFF135QBJ, ENCFF454ZDW 1122211304 ENCODE Processing Pipeline ee554d4632a774b72a748547fa97ee0d https://www.encodeproject.org/files/ENCFF014XHT/@@download/ENCFF014XHT.bigWig hg19 released borderline replicate concordance, low read depth ENCFF532CRC bam unfiltered alignments ENCSR272JAT ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX5-human ENCAB150NID DNA see document see document False 2014-07-07 ENCODE 1 50 ENCFF002BEY, ENCFF643CGH 1452008627 ENCODE Processing Pipeline b8a284ba84a2cdf5178187294a595d58 https://www.encodeproject.org/files/ENCFF532CRC/@@download/ENCFF532CRC.bam GRCh38 released borderline replicate concordance, low read depth ENCFF259XFT bam unfiltered alignments ENCSR272JAT ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX5-human ENCAB150NID DNA see document see document False 2014-07-07 ENCODE 2 50 ENCFF002BEZ, ENCFF643CGH 1781671958 ENCODE Processing Pipeline 9cd66ccaefdac874bc91eb74273d7155 https://www.encodeproject.org/files/ENCFF259XFT/@@download/ENCFF259XFT.bam GRCh38 released borderline replicate concordance, low read depth ENCFF468LGZ bam alignments ENCSR272JAT ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX5-human ENCAB150NID DNA see document see document False 2014-07-07 ENCODE 1 50 ENCFF002BEY, ENCFF643CGH 1076580199 ENCODE Processing Pipeline 319d3e1a3272167f9aa0fd056493b8cd https://www.encodeproject.org/files/ENCFF468LGZ/@@download/ENCFF468LGZ.bam GRCh38 released borderline replicate concordance, low read depth ENCFF092TPD bam alignments ENCSR272JAT ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX5-human ENCAB150NID DNA see document see document False 2014-07-07 ENCODE 2 50 ENCFF002BEZ, ENCFF643CGH 1337530886 ENCODE Processing Pipeline 9fc7b165611d6ecc6255a1df502bcbe2 https://www.encodeproject.org/files/ENCFF092TPD/@@download/ENCFF092TPD.bam GRCh38 released borderline replicate concordance, low read depth ENCFF810WFP bigWig signal p-value ENCSR272JAT ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX5-human ENCAB150NID DNA see document see document False 2014-07-07 ENCODE 1 ENCFF332SVJ, ENCFF468LGZ, ENCFF709XAA 975560544 ENCODE Processing Pipeline 723751fe51e72df3dca027e5203800df https://www.encodeproject.org/files/ENCFF810WFP/@@download/ENCFF810WFP.bigWig GRCh38 released borderline replicate concordance, low read depth ENCFF166VNH bigWig signal p-value ENCSR272JAT ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX5-human ENCAB150NID DNA see document see document False 2014-07-07 ENCODE 2 ENCFF092TPD, ENCFF332SVJ, ENCFF709XAA 1116355525 ENCODE Processing Pipeline 7161a5055ce654fe024138522a86286e https://www.encodeproject.org/files/ENCFF166VNH/@@download/ENCFF166VNH.bigWig GRCh38 released borderline replicate concordance, low read depth ENCFF923RYI bigWig signal p-value ENCSR272JAT ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX5-human ENCAB150NID DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF092TPD, ENCFF332SVJ, ENCFF468LGZ, ENCFF709XAA 1289899098 ENCODE Processing Pipeline 8e0a974ac375fbb6ebeb099c54b14b6a https://www.encodeproject.org/files/ENCFF923RYI/@@download/ENCFF923RYI.bigWig GRCh38 released borderline replicate concordance, low read depth ENCFF133JHI bigWig fold change over control ENCSR272JAT ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX5-human ENCAB150NID DNA see document see document False 2014-07-07 ENCODE 1 ENCFF332SVJ, ENCFF468LGZ, ENCFF709XAA 647436028 ENCODE Processing Pipeline f8457911b1e2a7d0af38b08dde82cf3c https://www.encodeproject.org/files/ENCFF133JHI/@@download/ENCFF133JHI.bigWig GRCh38 released borderline replicate concordance, low read depth ENCFF420RGP bigWig fold change over control ENCSR272JAT ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX5-human ENCAB150NID DNA see document see document False 2014-07-07 ENCODE 2 ENCFF092TPD, ENCFF332SVJ, ENCFF709XAA 829750645 ENCODE Processing Pipeline f96b98d255e24a845f26bfec494d86a7 https://www.encodeproject.org/files/ENCFF420RGP/@@download/ENCFF420RGP.bigWig GRCh38 released borderline replicate concordance, low read depth ENCFF803KNM bigWig fold change over control ENCSR272JAT ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX5-human ENCAB150NID DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF092TPD, ENCFF332SVJ, ENCFF468LGZ, ENCFF709XAA 1138898535 ENCODE Processing Pipeline 88cd3852b2de492d6d62086d31dd6915 https://www.encodeproject.org/files/ENCFF803KNM/@@download/ENCFF803KNM.bigWig GRCh38 released borderline replicate concordance, low read depth ENCFF502KNP bigBed narrowPeak peaks ENCSR272JAT ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX5-human ENCAB150NID DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF703QQK 11532461 ENCODE Processing Pipeline 6a5703f1a0fd3d32880f3ef711b67c82 https://www.encodeproject.org/files/ENCFF502KNP/@@download/ENCFF502KNP.bigBed GRCh38 released borderline replicate concordance, low read depth ENCFF203IYU bed narrowPeak peaks ENCSR272JAT ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX5-human ENCAB150NID DNA see document see document False 2014-07-07 ENCODE 2 ENCFF092TPD, ENCFF332SVJ, ENCFF709XAA 5743958 ENCODE Processing Pipeline a1f5c21907d2c7d2a51fd6ba43811b72 https://www.encodeproject.org/files/ENCFF203IYU/@@download/ENCFF203IYU.bed.gz GRCh38 released borderline replicate concordance, low read depth ENCFF703QQK bed narrowPeak peaks ENCSR272JAT ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX5-human ENCAB150NID DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF092TPD, ENCFF332SVJ, ENCFF468LGZ, ENCFF709XAA 6484414 ENCODE Processing Pipeline cdf0f321a7c2edec1015a64dff75ba9a https://www.encodeproject.org/files/ENCFF703QQK/@@download/ENCFF703QQK.bed.gz GRCh38 released borderline replicate concordance, low read depth ENCFF098RZO bed narrowPeak peaks ENCSR272JAT ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX5-human ENCAB150NID DNA see document see document False 2014-07-07 ENCODE 1 ENCFF332SVJ, ENCFF468LGZ, ENCFF709XAA 5456078 ENCODE Processing Pipeline a20d08cef41cf34690c4b645a5314f10 https://www.encodeproject.org/files/ENCFF098RZO/@@download/ENCFF098RZO.bed.gz GRCh38 released borderline replicate concordance, low read depth ENCFF403TAE bed narrowPeak optimal idr thresholded peaks ENCSR272JAT ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX5-human ENCAB150NID DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF098RZO, ENCFF203IYU, ENCFF419RSJ, ENCFF703QQK 126176 ENCODE Processing Pipeline 0a2c23700963d8712529a64a2b3d03a3 https://www.encodeproject.org/files/ENCFF403TAE/@@download/ENCFF403TAE.bed.gz GRCh38 released borderline replicate concordance, low read depth ENCFF336OBD bigBed narrowPeak conservative idr thresholded peaks ENCSR272JAT ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX5-human ENCAB150NID DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF525FJA 238966 ENCODE Processing Pipeline f4de470438db294ac201c2d6274750aa https://www.encodeproject.org/files/ENCFF336OBD/@@download/ENCFF336OBD.bigBed GRCh38 released borderline replicate concordance, low read depth ENCFF368VKS bigBed narrowPeak peaks ENCSR272JAT ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX5-human ENCAB150NID DNA see document see document False 2014-07-07 ENCODE 2 ENCFF203IYU 11415556 ENCODE Processing Pipeline 3681eb0f110eb7934220c659be3923df https://www.encodeproject.org/files/ENCFF368VKS/@@download/ENCFF368VKS.bigBed GRCh38 released borderline replicate concordance, low read depth ENCFF987JYW bigBed narrowPeak peaks ENCSR272JAT ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX5-human ENCAB150NID DNA see document see document False 2014-07-07 ENCODE 1 ENCFF098RZO 11389644 ENCODE Processing Pipeline 0e6a78c78a589150c55b8151f540cbc6 https://www.encodeproject.org/files/ENCFF987JYW/@@download/ENCFF987JYW.bigBed GRCh38 released borderline replicate concordance, low read depth ENCFF525FJA bed narrowPeak conservative idr thresholded peaks ENCSR272JAT ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX5-human ENCAB150NID DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF098RZO, ENCFF203IYU, ENCFF419RSJ, ENCFF703QQK 117052 ENCODE Processing Pipeline 8b402e7dd389473e2aceb4d748390b25 https://www.encodeproject.org/files/ENCFF525FJA/@@download/ENCFF525FJA.bed.gz GRCh38 released borderline replicate concordance, low read depth ENCFF215QHG bigBed narrowPeak optimal idr thresholded peaks ENCSR272JAT ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX5-human ENCAB150NID DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF403TAE 250408 ENCODE Processing Pipeline 40e68f4ab55965d717cdb0b06ca643e5 https://www.encodeproject.org/files/ENCFF215QHG/@@download/ENCFF215QHG.bigBed GRCh38 released borderline replicate concordance, low read depth ENCFF720LMT bam unfiltered alignments ENCSR272JAT ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX5-human ENCAB150NID DNA see document see document False 2014-07-07 ENCODE 1 50 ENCFF002BEY, ENCFF807MUK 1447815970 ENCODE Processing Pipeline 6814e8707592662994c092169be55ac8 https://www.encodeproject.org/files/ENCFF720LMT/@@download/ENCFF720LMT.bam hg19 released borderline replicate concordance, low read depth ENCFF340QIC bam unfiltered alignments ENCSR272JAT ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX5-human ENCAB150NID DNA see document see document False 2014-07-07 ENCODE 2 50 ENCFF002BEZ, ENCFF807MUK 1775698457 ENCODE Processing Pipeline d953ff022291348fedaa1ef0577a1cf7 https://www.encodeproject.org/files/ENCFF340QIC/@@download/ENCFF340QIC.bam hg19 released borderline replicate concordance, low read depth ENCFF454ZDW bam alignments ENCSR272JAT ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX5-human ENCAB150NID DNA see document see document False 2014-07-07 ENCODE 1 50 ENCFF002BEY, ENCFF807MUK 1076764085 ENCODE Processing Pipeline 46509af6c013136bf9607bbb3c664d7f https://www.encodeproject.org/files/ENCFF454ZDW/@@download/ENCFF454ZDW.bam hg19 released borderline replicate concordance, low read depth ENCFF135QBJ bam alignments ENCSR272JAT ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX5-human ENCAB150NID DNA see document see document False 2014-07-07 ENCODE 2 50 ENCFF002BEZ, ENCFF807MUK 1337498004 ENCODE Processing Pipeline bbc64559ead65b0a38cf866cfd983506 https://www.encodeproject.org/files/ENCFF135QBJ/@@download/ENCFF135QBJ.bam hg19 released borderline replicate concordance, low read depth ENCFF361FQK bed narrowPeak peaks ENCSR272JAT ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX5-human ENCAB150NID DNA see document see document False 2014-07-07 ENCODE 1 ENCFF023YMB, ENCFF061QOJ, ENCFF454ZDW 5521548 ENCODE Processing Pipeline 546f0aed9f7d2c4d9afeb14cb1c1159f https://www.encodeproject.org/files/ENCFF361FQK/@@download/ENCFF361FQK.bed.gz hg19 released borderline replicate concordance, low read depth ENCFF578MMW bigWig signal p-value ENCSR272JAT ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX5-human ENCAB150NID DNA see document see document False 2014-07-07 ENCODE 1 ENCFF023YMB, ENCFF061QOJ, ENCFF454ZDW 960690828 ENCODE Processing Pipeline 0ba5ede97c4a4aa8dc0e8f622c337e22 https://www.encodeproject.org/files/ENCFF578MMW/@@download/ENCFF578MMW.bigWig hg19 released borderline replicate concordance, low read depth ENCFF978SSL bed narrowPeak peaks ENCSR272JAT ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX5-human ENCAB150NID DNA see document see document False 2014-07-07 ENCODE 2 ENCFF023YMB, ENCFF061QOJ, ENCFF135QBJ 5968427 ENCODE Processing Pipeline 25f52f43840b144d07c960e5eafe18e9 https://www.encodeproject.org/files/ENCFF978SSL/@@download/ENCFF978SSL.bed.gz hg19 released borderline replicate concordance, low read depth ENCFF005DDK bigWig fold change over control ENCSR272JAT ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX5-human ENCAB150NID DNA see document see document False 2014-07-07 ENCODE 1 ENCFF023YMB, ENCFF061QOJ, ENCFF454ZDW 648062461 ENCODE Processing Pipeline 4c79260ae801b00258be655526aebce5 https://www.encodeproject.org/files/ENCFF005DDK/@@download/ENCFF005DDK.bigWig hg19 released borderline replicate concordance, low read depth ENCFF091ZMV bigBed narrowPeak peaks ENCSR272JAT ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX5-human ENCAB150NID DNA see document see document False 2014-07-07 ENCODE 1 ENCFF361FQK 11387377 ENCODE Processing Pipeline f5ac11417d1fa0f95641d07bd3a4a0cd https://www.encodeproject.org/files/ENCFF091ZMV/@@download/ENCFF091ZMV.bigBed hg19 released borderline replicate concordance, low read depth ENCFF816IYO bigBed narrowPeak peaks ENCSR272JAT ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX5-human ENCAB150NID DNA see document see document False 2014-07-07 ENCODE 2 ENCFF978SSL 11431029 ENCODE Processing Pipeline 346a9ffb8cc72a94e02c6e3fc164312a https://www.encodeproject.org/files/ENCFF816IYO/@@download/ENCFF816IYO.bigBed hg19 released borderline replicate concordance, low read depth ENCFF056SCJ bigBed narrowPeak peaks ENCSR272JAT ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX5-human ENCAB150NID DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF843XJF 11518522 ENCODE Processing Pipeline d898b405e3e827caf52d2dc7821c850c https://www.encodeproject.org/files/ENCFF056SCJ/@@download/ENCFF056SCJ.bigBed hg19 released borderline replicate concordance, low read depth ENCFF219DOH bed narrowPeak conservative idr thresholded peaks ENCSR272JAT ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX5-human ENCAB150NID DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF001TDO, ENCFF361FQK, ENCFF843XJF, ENCFF978SSL 114020 ENCODE Processing Pipeline 6988bdc10ce774b12b0db425c848158c https://www.encodeproject.org/files/ENCFF219DOH/@@download/ENCFF219DOH.bed.gz hg19 released borderline replicate concordance, low read depth ENCFF961NDZ bigBed narrowPeak conservative idr thresholded peaks ENCSR272JAT ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX5-human ENCAB150NID DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF219DOH 233525 ENCODE Processing Pipeline 56b0639b690a81043a2660176111d419 https://www.encodeproject.org/files/ENCFF961NDZ/@@download/ENCFF961NDZ.bigBed hg19 released borderline replicate concordance, low read depth ENCFF843XJF bed narrowPeak peaks ENCSR272JAT ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX5-human ENCAB150NID DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF023YMB, ENCFF061QOJ, ENCFF135QBJ, ENCFF454ZDW 6501047 ENCODE Processing Pipeline cc4a92f0c29867bfd253d5b2e84101ef https://www.encodeproject.org/files/ENCFF843XJF/@@download/ENCFF843XJF.bed.gz hg19 released borderline replicate concordance, low read depth ENCFF187SDA bigBed narrowPeak optimal idr thresholded peaks ENCSR272JAT ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX5-human ENCAB150NID DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF062ARS 250355 ENCODE Processing Pipeline 6a58ec500f880b172e26bee4e4f709c7 https://www.encodeproject.org/files/ENCFF187SDA/@@download/ENCFF187SDA.bigBed hg19 released borderline replicate concordance, low read depth ENCFF062ARS bed narrowPeak optimal idr thresholded peaks ENCSR272JAT ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX5-human ENCAB150NID DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF001TDO, ENCFF361FQK, ENCFF843XJF, ENCFF978SSL 127162 ENCODE Processing Pipeline 169dba7b829155124d33176148608d77 https://www.encodeproject.org/files/ENCFF062ARS/@@download/ENCFF062ARS.bed.gz hg19 released borderline replicate concordance, low read depth ENCFF000QIN bam alignments ENCSR000BNN ChIP-seq EFO:0002067 K562 cell line Homo sapiens THAP1-human ENCAB000ALY DNA see document see document False 2011-07-18 ENCODE 1 ENCFF000QIU 653692019 Richard Myers, HAIB 0daf6ada5ad5e7c68aad7baa1d9ffa3b https://www.encodeproject.org/files/ENCFF000QIN/@@download/ENCFF000QIN.bam hg19 archived low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF000QIO bigBed broadPeak peaks ENCSR000BNN ChIP-seq EFO:0002067 K562 cell line Homo sapiens THAP1-human ENCAB000ALY DNA see document see document False 2011-07-18 ENCODE 1 1 ENCFF001ULS 152234 Richard Myers, HAIB 9ef58e0870c2400b33c042c3db3691e6 https://www.encodeproject.org/files/ENCFF000QIO/@@download/ENCFF000QIO.bigBed hg19 archived low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF000QIP bigBed broadPeak peaks ENCSR000BNN ChIP-seq EFO:0002067 K562 cell line Homo sapiens THAP1-human ENCAB000ALY DNA see document see document False 2011-07-18 ENCODE 2 1 ENCFF001ULU 171113 Richard Myers, HAIB c8ce200fbdfdd25f005dead28a7be7c6 https://www.encodeproject.org/files/ENCFF000QIP/@@download/ENCFF000QIP.bigBed hg19 archived low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF000QIQ bam alignments ENCSR000BNN ChIP-seq EFO:0002067 K562 cell line Homo sapiens THAP1-human ENCAB000ALY DNA see document see document False 2011-07-18 ENCODE 2 ENCFF000QIY 787131496 Richard Myers, HAIB 7ee60fd2b8f1f7477749e36532ecd239 https://www.encodeproject.org/files/ENCFF000QIQ/@@download/ENCFF000QIQ.bam hg19 archived low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF000QIR bigWig raw signal ENCSR000BNN ChIP-seq EFO:0002067 K562 cell line Homo sapiens THAP1-human ENCAB000ALY DNA see document see document False 2011-07-18 ENCODE 1 1 5740273 Richard Myers, HAIB 4c7e9588bc4363d402513ba269997929 https://www.encodeproject.org/files/ENCFF000QIR/@@download/ENCFF000QIR.bigWig hg19 archived low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample, missing derived_from control insufficient read depth ENCFF000QIT bigWig raw signal ENCSR000BNN ChIP-seq EFO:0002067 K562 cell line Homo sapiens THAP1-human ENCAB000ALY DNA see document see document False 2011-07-18 ENCODE 2 1 11615742 Richard Myers, HAIB ea73ba57e49e883b02a2d3a628feaeb9 https://www.encodeproject.org/files/ENCFF000QIT/@@download/ENCFF000QIT.bigWig hg19 archived low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample, missing derived_from control insufficient read depth ENCFF000QIU fastq reads ENCSR000BNN ChIP-seq EFO:0002067 K562 cell line Homo sapiens THAP1-human ENCAB000ALY DNA see document see document False 2011-07-18 ENCODE 1 1 36 single-ended 630257150 Richard Myers, HAIB 7b932c43caf2c8923058d2c6952e4875 https://www.encodeproject.org/files/ENCFF000QIU/@@download/ENCFF000QIU.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000QEX/ released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF000QIY fastq reads ENCSR000BNN ChIP-seq EFO:0002067 K562 cell line Homo sapiens THAP1-human ENCAB000ALY DNA see document see document False 2011-07-18 ENCODE 2 1 36 single-ended 763979674 Richard Myers, HAIB 157ca169f856e37b56aabbcb61b8c960 https://www.encodeproject.org/files/ENCFF000QIY/@@download/ENCFF000QIY.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000QEX/ released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF001ULS bed broadPeak peaks ENCSR000BNN ChIP-seq EFO:0002067 K562 cell line Homo sapiens THAP1-human ENCAB000ALY DNA see document see document False 2011-07-18 ENCODE 1 1 66359 Richard Myers, HAIB 507c6f9dcb6ee1c3db45c9de3ee24fe4 https://www.encodeproject.org/files/ENCFF001ULS/@@download/ENCFF001ULS.bed.gz hg19 archived low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample, missing derived_from control insufficient read depth ENCFF001ULU bed broadPeak peaks ENCSR000BNN ChIP-seq EFO:0002067 K562 cell line Homo sapiens THAP1-human ENCAB000ALY DNA see document see document False 2011-07-18 ENCODE 2 1 67685 Richard Myers, HAIB a00ddf10b1437f02ac05bfd15d847a67 https://www.encodeproject.org/files/ENCFF001ULU/@@download/ENCFF001ULU.bed.gz hg19 archived low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample, missing derived_from control insufficient read depth ENCFF002CMU bed narrowPeak optimal idr thresholded peaks ENCSR000BNN ChIP-seq EFO:0002067 K562 cell line Homo sapiens THAP1-human ENCAB000ALY DNA see document see document False 2011-07-18 ENCODE 71409 ENCODE Consortium Analysis Working Group 7cfa19d276cd276596c0eca1da30d958 https://www.encodeproject.org/files/ENCFF002CMU/@@download/ENCFF002CMU.bed.gz hg19 archived low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample, missing derived_from control insufficient read depth ENCFF147CFM bigBed narrowPeak optimal idr thresholded peaks ENCSR000BNN ChIP-seq EFO:0002067 K562 cell line Homo sapiens THAP1-human ENCAB000ALY DNA see document see document False 2011-07-18 ENCODE ENCFF002CMU 205121 ENCODE Consortium e1a701a68bbb99855c37aa6c98a88614 https://www.encodeproject.org/files/ENCFF147CFM/@@download/ENCFF147CFM.bigBed hg19 archived low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF926VYO bam unfiltered alignments ENCSR000BNN ChIP-seq EFO:0002067 K562 cell line Homo sapiens THAP1-human ENCAB000ALY DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000QIU, ENCFF643CGH 835939088 ENCODE Processing Pipeline 2604a4b2435e3f145dd652056b886363 https://www.encodeproject.org/files/ENCFF926VYO/@@download/ENCFF926VYO.bam GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF393ZAK bam alignments ENCSR000BNN ChIP-seq EFO:0002067 K562 cell line Homo sapiens THAP1-human ENCAB000ALY DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000QIU, ENCFF643CGH 406772395 ENCODE Processing Pipeline 3afbfb2ad696557f226e46cd94cbd0db https://www.encodeproject.org/files/ENCFF393ZAK/@@download/ENCFF393ZAK.bam GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF158OEK bam unfiltered alignments ENCSR000BNN ChIP-seq EFO:0002067 K562 cell line Homo sapiens THAP1-human ENCAB000ALY DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000QIY, ENCFF643CGH 962747233 ENCODE Processing Pipeline 5e13b2fbc530c0f0e45ab11d7e0ea43e https://www.encodeproject.org/files/ENCFF158OEK/@@download/ENCFF158OEK.bam GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF680COV bam alignments ENCSR000BNN ChIP-seq EFO:0002067 K562 cell line Homo sapiens THAP1-human ENCAB000ALY DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000QIY, ENCFF643CGH 415460988 ENCODE Processing Pipeline 4d66132fa95cf021a9b565ddfda18500 https://www.encodeproject.org/files/ENCFF680COV/@@download/ENCFF680COV.bam GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF799GRV bam unfiltered alignments ENCSR000BNN ChIP-seq EFO:0002067 K562 cell line Homo sapiens THAP1-human ENCAB000ALY DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000QIU, ENCFF807MUK 835040713 ENCODE Processing Pipeline 6d76e21a16bfe97a251fee332dec1173 https://www.encodeproject.org/files/ENCFF799GRV/@@download/ENCFF799GRV.bam hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF132LHA bam alignments ENCSR000BNN ChIP-seq EFO:0002067 K562 cell line Homo sapiens THAP1-human ENCAB000ALY DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000QIU, ENCFF807MUK 407089372 ENCODE Processing Pipeline 1a0406a7db438f101e1012ad4bd69815 https://www.encodeproject.org/files/ENCFF132LHA/@@download/ENCFF132LHA.bam hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF670GGQ bam alignments ENCSR000BNN ChIP-seq EFO:0002067 K562 cell line Homo sapiens THAP1-human ENCAB000ALY DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000QIY, ENCFF807MUK 415811046 ENCODE Processing Pipeline 528466f7af58f8195203a0ed53c841a2 https://www.encodeproject.org/files/ENCFF670GGQ/@@download/ENCFF670GGQ.bam hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF346GCX bam unfiltered alignments ENCSR000BNN ChIP-seq EFO:0002067 K562 cell line Homo sapiens THAP1-human ENCAB000ALY DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000QIY, ENCFF807MUK 959984578 ENCODE Processing Pipeline e2e7cede9bb7f5c69cb6dba41c4399b3 https://www.encodeproject.org/files/ENCFF346GCX/@@download/ENCFF346GCX.bam hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF741CWQ bigWig signal p-value ENCSR000BNN ChIP-seq EFO:0002067 K562 cell line Homo sapiens THAP1-human ENCAB000ALY DNA see document see document False 2011-07-18 ENCODE 1 ENCFF393ZAK, ENCFF772PJM 206747064 ENCODE Processing Pipeline 325d273d6d16af732e5929e462ba4dd0 https://www.encodeproject.org/files/ENCFF741CWQ/@@download/ENCFF741CWQ.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF294WXY bigWig fold change over control ENCSR000BNN ChIP-seq EFO:0002067 K562 cell line Homo sapiens THAP1-human ENCAB000ALY DNA see document see document False 2011-07-18 ENCODE 1 ENCFF393ZAK, ENCFF772PJM 166850950 ENCODE Processing Pipeline 7fbc65546df871c3a9c79358e07c8686 https://www.encodeproject.org/files/ENCFF294WXY/@@download/ENCFF294WXY.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF455SIF bigBed narrowPeak conservative idr thresholded peaks ENCSR000BNN ChIP-seq EFO:0002067 K562 cell line Homo sapiens THAP1-human ENCAB000ALY DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF144DMD 222013 ENCODE Processing Pipeline 5e101e87acfa02901f4a65050bfa6384 https://www.encodeproject.org/files/ENCFF455SIF/@@download/ENCFF455SIF.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF861VUI bigWig fold change over control ENCSR000BNN ChIP-seq EFO:0002067 K562 cell line Homo sapiens THAP1-human ENCAB000ALY DNA see document see document False 2011-07-18 ENCODE 2 ENCFF680COV, ENCFF772PJM 161349045 ENCODE Processing Pipeline b52725bfa343892a61c5c52dff23dd08 https://www.encodeproject.org/files/ENCFF861VUI/@@download/ENCFF861VUI.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF862ATB bigWig fold change over control ENCSR000BNN ChIP-seq EFO:0002067 K562 cell line Homo sapiens THAP1-human ENCAB000ALY DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF393ZAK, ENCFF680COV, ENCFF772PJM 301069886 ENCODE Processing Pipeline 52ed201c354f63eb4dfaa857ca3ff626 https://www.encodeproject.org/files/ENCFF862ATB/@@download/ENCFF862ATB.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF734MTF bigBed narrowPeak peaks ENCSR000BNN ChIP-seq EFO:0002067 K562 cell line Homo sapiens THAP1-human ENCAB000ALY DNA see document see document False 2011-07-18 ENCODE 2 ENCFF950RJP 7626994 ENCODE Processing Pipeline f2114d1c99adf28916940046d3a5d1dc https://www.encodeproject.org/files/ENCFF734MTF/@@download/ENCFF734MTF.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF971ZIJ bigWig signal p-value ENCSR000BNN ChIP-seq EFO:0002067 K562 cell line Homo sapiens THAP1-human ENCAB000ALY DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF393ZAK, ENCFF680COV, ENCFF772PJM 198780751 ENCODE Processing Pipeline dcd07d2a4a7f3b86662bfa96bec97b05 https://www.encodeproject.org/files/ENCFF971ZIJ/@@download/ENCFF971ZIJ.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF950RJP bed narrowPeak peaks ENCSR000BNN ChIP-seq EFO:0002067 K562 cell line Homo sapiens THAP1-human ENCAB000ALY DNA see document see document False 2011-07-18 ENCODE 2 ENCFF680COV, ENCFF772PJM 3809186 ENCODE Processing Pipeline 9b71261baab03d5c895ccffc7fea547b https://www.encodeproject.org/files/ENCFF950RJP/@@download/ENCFF950RJP.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF130TPD bed narrowPeak optimal idr thresholded peaks ENCSR000BNN ChIP-seq EFO:0002067 K562 cell line Homo sapiens THAP1-human ENCAB000ALY DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF061TOQ, ENCFF419RSJ, ENCFF510COO, ENCFF950RJP 106296 ENCODE Processing Pipeline b41833219a82f27ff1db888e32c31b17 https://www.encodeproject.org/files/ENCFF130TPD/@@download/ENCFF130TPD.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF510COO bed narrowPeak peaks ENCSR000BNN ChIP-seq EFO:0002067 K562 cell line Homo sapiens THAP1-human ENCAB000ALY DNA see document see document False 2011-07-18 ENCODE 1 ENCFF393ZAK, ENCFF772PJM 4285892 ENCODE Processing Pipeline 079c679cbd2ec6d3b42623ad499f49a0 https://www.encodeproject.org/files/ENCFF510COO/@@download/ENCFF510COO.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF061TOQ bed narrowPeak peaks ENCSR000BNN ChIP-seq EFO:0002067 K562 cell line Homo sapiens THAP1-human ENCAB000ALY DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF393ZAK, ENCFF680COV, ENCFF772PJM 4777215 ENCODE Processing Pipeline bcfd6b78c9afa0aacc5f4588ede61829 https://www.encodeproject.org/files/ENCFF061TOQ/@@download/ENCFF061TOQ.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF691RKN bigBed narrowPeak peaks ENCSR000BNN ChIP-seq EFO:0002067 K562 cell line Homo sapiens THAP1-human ENCAB000ALY DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF061TOQ 10364549 ENCODE Processing Pipeline f484bb3b8595d7973483fa804b202651 https://www.encodeproject.org/files/ENCFF691RKN/@@download/ENCFF691RKN.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF144DMD bed narrowPeak conservative idr thresholded peaks ENCSR000BNN ChIP-seq EFO:0002067 K562 cell line Homo sapiens THAP1-human ENCAB000ALY DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF061TOQ, ENCFF419RSJ, ENCFF510COO, ENCFF950RJP 84767 ENCODE Processing Pipeline f8a3a674d78f788bd85453d0e28e5e90 https://www.encodeproject.org/files/ENCFF144DMD/@@download/ENCFF144DMD.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF629JMT bigBed narrowPeak optimal idr thresholded peaks ENCSR000BNN ChIP-seq EFO:0002067 K562 cell line Homo sapiens THAP1-human ENCAB000ALY DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF130TPD 255455 ENCODE Processing Pipeline 3507b8e99888fc4d927a1c04a145a954 https://www.encodeproject.org/files/ENCFF629JMT/@@download/ENCFF629JMT.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF520LJR bigWig signal p-value ENCSR000BNN ChIP-seq EFO:0002067 K562 cell line Homo sapiens THAP1-human ENCAB000ALY DNA see document see document False 2011-07-18 ENCODE 2 ENCFF680COV, ENCFF772PJM 200168191 ENCODE Processing Pipeline 590ec5da92220ca5e7c9ff17c94bdf9e https://www.encodeproject.org/files/ENCFF520LJR/@@download/ENCFF520LJR.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF502MUI bigBed narrowPeak peaks ENCSR000BNN ChIP-seq EFO:0002067 K562 cell line Homo sapiens THAP1-human ENCAB000ALY DNA see document see document False 2011-07-18 ENCODE 1 ENCFF510COO 9795643 ENCODE Processing Pipeline 6e5ea488d40e41a4170f6d779ff48691 https://www.encodeproject.org/files/ENCFF502MUI/@@download/ENCFF502MUI.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF844BFL bigWig signal p-value ENCSR000BNN ChIP-seq EFO:0002067 K562 cell line Homo sapiens THAP1-human ENCAB000ALY DNA see document see document False 2011-07-18 ENCODE 1 ENCFF132LHA, ENCFF750MIM 206800835 ENCODE Processing Pipeline 2c13b44b3f1368d350b806ba2cf6c24e https://www.encodeproject.org/files/ENCFF844BFL/@@download/ENCFF844BFL.bigWig hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF029VIE bigWig signal p-value ENCSR000BNN ChIP-seq EFO:0002067 K562 cell line Homo sapiens THAP1-human ENCAB000ALY DNA see document see document False 2011-07-18 ENCODE 2 ENCFF670GGQ, ENCFF750MIM 200333852 ENCODE Processing Pipeline bbad63db86077b5aedb1ca64948d0572 https://www.encodeproject.org/files/ENCFF029VIE/@@download/ENCFF029VIE.bigWig hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF702VIT bigWig signal p-value ENCSR000BNN ChIP-seq EFO:0002067 K562 cell line Homo sapiens THAP1-human ENCAB000ALY DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF132LHA, ENCFF670GGQ, ENCFF750MIM 198911902 ENCODE Processing Pipeline 0b7adfc8ad2e47356d9b4fd2a8f17e4b https://www.encodeproject.org/files/ENCFF702VIT/@@download/ENCFF702VIT.bigWig hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF893HMM bigWig fold change over control ENCSR000BNN ChIP-seq EFO:0002067 K562 cell line Homo sapiens THAP1-human ENCAB000ALY DNA see document see document False 2011-07-18 ENCODE 1 ENCFF132LHA, ENCFF750MIM 167093396 ENCODE Processing Pipeline 537146eb06bad38ab0970bed115de47d https://www.encodeproject.org/files/ENCFF893HMM/@@download/ENCFF893HMM.bigWig hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF226ZYP bigWig fold change over control ENCSR000BNN ChIP-seq EFO:0002067 K562 cell line Homo sapiens THAP1-human ENCAB000ALY DNA see document see document False 2011-07-18 ENCODE 2 ENCFF670GGQ, ENCFF750MIM 159932957 ENCODE Processing Pipeline 58ba632863a3c9a402a58b2da60957ce https://www.encodeproject.org/files/ENCFF226ZYP/@@download/ENCFF226ZYP.bigWig hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF508HQW bed narrowPeak peaks ENCSR000BNN ChIP-seq EFO:0002067 K562 cell line Homo sapiens THAP1-human ENCAB000ALY DNA see document see document False 2011-07-18 ENCODE 1 ENCFF132LHA, ENCFF750MIM 4290623 ENCODE Processing Pipeline 1aa4372b810d58821068a34162f0722a https://www.encodeproject.org/files/ENCFF508HQW/@@download/ENCFF508HQW.bed.gz hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF495GTU bed narrowPeak peaks ENCSR000BNN ChIP-seq EFO:0002067 K562 cell line Homo sapiens THAP1-human ENCAB000ALY DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF132LHA, ENCFF670GGQ, ENCFF750MIM 4784128 ENCODE Processing Pipeline 29c836e67caa341c667c48106cf1c9f6 https://www.encodeproject.org/files/ENCFF495GTU/@@download/ENCFF495GTU.bed.gz hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF658UQJ bigBed narrowPeak peaks ENCSR000BNN ChIP-seq EFO:0002067 K562 cell line Homo sapiens THAP1-human ENCAB000ALY DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF495GTU 10365870 ENCODE Processing Pipeline bd7f825817e5b43ad37174fe405fff77 https://www.encodeproject.org/files/ENCFF658UQJ/@@download/ENCFF658UQJ.bigBed hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF386XZK bigBed narrowPeak peaks ENCSR000BNN ChIP-seq EFO:0002067 K562 cell line Homo sapiens THAP1-human ENCAB000ALY DNA see document see document False 2011-07-18 ENCODE 1 ENCFF508HQW 9793916 ENCODE Processing Pipeline 7f2bad8a85cc2045ae06805119c245b1 https://www.encodeproject.org/files/ENCFF386XZK/@@download/ENCFF386XZK.bigBed hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF993AHY bigWig fold change over control ENCSR000BNN ChIP-seq EFO:0002067 K562 cell line Homo sapiens THAP1-human ENCAB000ALY DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF132LHA, ENCFF670GGQ, ENCFF750MIM 300198349 ENCODE Processing Pipeline d7bfd0ed218a917e455025bb9a99e106 https://www.encodeproject.org/files/ENCFF993AHY/@@download/ENCFF993AHY.bigWig hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF331SRY bed narrowPeak peaks ENCSR000BNN ChIP-seq EFO:0002067 K562 cell line Homo sapiens THAP1-human ENCAB000ALY DNA see document see document False 2011-07-18 ENCODE 2 ENCFF670GGQ, ENCFF750MIM 3812396 ENCODE Processing Pipeline f3876383ef270f662acdd18de7596855 https://www.encodeproject.org/files/ENCFF331SRY/@@download/ENCFF331SRY.bed.gz hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF580FKJ bigBed narrowPeak peaks ENCSR000BNN ChIP-seq EFO:0002067 K562 cell line Homo sapiens THAP1-human ENCAB000ALY DNA see document see document False 2011-07-18 ENCODE 2 ENCFF331SRY 7630623 ENCODE Processing Pipeline 4026e0503da83535254d4e557aae6896 https://www.encodeproject.org/files/ENCFF580FKJ/@@download/ENCFF580FKJ.bigBed hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF641LJY bed narrowPeak optimal idr thresholded peaks ENCSR000BNN ChIP-seq EFO:0002067 K562 cell line Homo sapiens THAP1-human ENCAB000ALY DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF001TDO, ENCFF331SRY, ENCFF495GTU, ENCFF508HQW 110805 ENCODE Processing Pipeline 76675a78c7d8cf4618002d20c7af192b https://www.encodeproject.org/files/ENCFF641LJY/@@download/ENCFF641LJY.bed.gz hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF596AVD bigBed narrowPeak optimal idr thresholded peaks ENCSR000BNN ChIP-seq EFO:0002067 K562 cell line Homo sapiens THAP1-human ENCAB000ALY DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF641LJY 260776 ENCODE Processing Pipeline b2b0574a79ff1bbdc20de77af250d021 https://www.encodeproject.org/files/ENCFF596AVD/@@download/ENCFF596AVD.bigBed hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF981YOM bed narrowPeak conservative idr thresholded peaks ENCSR000BNN ChIP-seq EFO:0002067 K562 cell line Homo sapiens THAP1-human ENCAB000ALY DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF001TDO, ENCFF331SRY, ENCFF495GTU, ENCFF508HQW 85839 ENCODE Processing Pipeline 3292b974c2e8feb2794e0109805da9b8 https://www.encodeproject.org/files/ENCFF981YOM/@@download/ENCFF981YOM.bed.gz hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF901TDN bigBed narrowPeak conservative idr thresholded peaks ENCSR000BNN ChIP-seq EFO:0002067 K562 cell line Homo sapiens THAP1-human ENCAB000ALY DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF981YOM 223104 ENCODE Processing Pipeline c55de2c2e05eb61e52af3490f82bf8b5 https://www.encodeproject.org/files/ENCFF901TDN/@@download/ENCFF901TDN.bigBed hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF321WHZ fastq reads ENCSR898XMH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZFP91-human ENCAB949JPE DNA False 2018-01-31 ENCODE 2 1 100 paired-ended 1 ENCFF905FGU 2231815735 Michael Snyder, Stanford 43c277ce39e03425cb8882028ebda39f https://www.encodeproject.org/files/ENCFF321WHZ/@@download/ENCFF321WHZ.fastq.gz Illumina HiSeq 2000 /files/ENCFF240DTE/ released experiment not submitted to GEO partially characterized antibody ENCFF717UVU fastq reads ENCSR898XMH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZFP91-human ENCAB949JPE DNA False 2018-01-31 ENCODE 1 1 100 paired-ended 2 ENCFF715YUU 2464420513 Michael Snyder, Stanford dd22bd42de04223479ae1426f918b117 https://www.encodeproject.org/files/ENCFF717UVU/@@download/ENCFF717UVU.fastq.gz Illumina HiSeq 2000 /files/ENCFF368UOC/ released experiment not submitted to GEO partially characterized antibody ENCFF905FGU fastq reads ENCSR898XMH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZFP91-human ENCAB949JPE DNA False 2018-01-31 ENCODE 2 1 100 paired-ended 2 ENCFF321WHZ 2231725971 Michael Snyder, Stanford 5fa154aba2f741082bf5b3a983b8844d https://www.encodeproject.org/files/ENCFF905FGU/@@download/ENCFF905FGU.fastq.gz Illumina HiSeq 2000 /files/ENCFF608MDV/ released experiment not submitted to GEO partially characterized antibody ENCFF715YUU fastq reads ENCSR898XMH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZFP91-human ENCAB949JPE DNA False 2018-01-31 ENCODE 1 1 100 paired-ended 1 ENCFF717UVU 2458887680 Michael Snyder, Stanford c4ca0dd7b1c0cce178b625d840208da5 https://www.encodeproject.org/files/ENCFF715YUU/@@download/ENCFF715YUU.fastq.gz Illumina HiSeq 2000 /files/ENCFF410PHD/ released experiment not submitted to GEO partially characterized antibody ENCFF640TVU bam unfiltered alignments ENCSR898XMH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZFP91-human ENCAB949JPE DNA False 2018-01-31 ENCODE 2 100 ENCFF321WHZ, ENCFF643CGH, ENCFF905FGU 4882651530 ENCODE Processing Pipeline d6d7453cd4573e8ce932c1213de93de1 https://www.encodeproject.org/files/ENCFF640TVU/@@download/ENCFF640TVU.bam GRCh38 released experiment not submitted to GEO partially characterized antibody ENCFF368PUV bam unfiltered alignments ENCSR898XMH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZFP91-human ENCAB949JPE DNA False 2018-01-31 ENCODE 1 100 ENCFF643CGH, ENCFF715YUU, ENCFF717UVU 5336020342 ENCODE Processing Pipeline 0cdfff29c41177bc2cadc25173fbe99a https://www.encodeproject.org/files/ENCFF368PUV/@@download/ENCFF368PUV.bam GRCh38 released experiment not submitted to GEO partially characterized antibody ENCFF161YVC bam unfiltered alignments ENCSR898XMH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZFP91-human ENCAB949JPE DNA False 2018-01-31 ENCODE 2 100 ENCFF321WHZ, ENCFF807MUK, ENCFF905FGU 4878670622 ENCODE Processing Pipeline a35d3d094b64686cd0d2c6d8196e8e77 https://www.encodeproject.org/files/ENCFF161YVC/@@download/ENCFF161YVC.bam hg19 released experiment not submitted to GEO partially characterized antibody ENCFF607OQO bam unfiltered alignments ENCSR898XMH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZFP91-human ENCAB949JPE DNA False 2018-01-31 ENCODE 1 100 ENCFF715YUU, ENCFF717UVU, ENCFF807MUK 5331647064 ENCODE Processing Pipeline c7b7ba592a0bf09bcfe5f405a6ce4e6a https://www.encodeproject.org/files/ENCFF607OQO/@@download/ENCFF607OQO.bam hg19 released experiment not submitted to GEO partially characterized antibody ENCFF094TQU bam alignments ENCSR898XMH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZFP91-human ENCAB949JPE DNA False 2018-01-31 ENCODE 2 100 ENCFF321WHZ, ENCFF807MUK, ENCFF905FGU 4209188851 ENCODE Processing Pipeline 3427373ee1d121e285de2feda53c4574 https://www.encodeproject.org/files/ENCFF094TQU/@@download/ENCFF094TQU.bam hg19 released experiment not submitted to GEO partially characterized antibody ENCFF702FFH bam alignments ENCSR898XMH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZFP91-human ENCAB949JPE DNA False 2018-01-31 ENCODE 2 100 ENCFF321WHZ, ENCFF643CGH, ENCFF905FGU 4212057344 ENCODE Processing Pipeline b55d70319ae7b48f1df5cf5f308ab3a2 https://www.encodeproject.org/files/ENCFF702FFH/@@download/ENCFF702FFH.bam GRCh38 released experiment not submitted to GEO partially characterized antibody ENCFF971SDE bam alignments ENCSR898XMH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZFP91-human ENCAB949JPE DNA False 2018-01-31 ENCODE 1 100 ENCFF643CGH, ENCFF715YUU, ENCFF717UVU 4551870416 ENCODE Processing Pipeline 0f8fa2f3dad816a5d505e8d3b9b933e7 https://www.encodeproject.org/files/ENCFF971SDE/@@download/ENCFF971SDE.bam GRCh38 released experiment not submitted to GEO partially characterized antibody ENCFF592NKP bam alignments ENCSR898XMH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZFP91-human ENCAB949JPE DNA False 2018-01-31 ENCODE 1 100 ENCFF715YUU, ENCFF717UVU, ENCFF807MUK 4548914779 ENCODE Processing Pipeline 5c7087ef2c0ea449226f692cccc0f726 https://www.encodeproject.org/files/ENCFF592NKP/@@download/ENCFF592NKP.bam hg19 released experiment not submitted to GEO partially characterized antibody ENCFF926SRD bed narrowPeak peaks ENCSR898XMH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZFP91-human ENCAB949JPE DNA False 2018-01-31 ENCODE 2 ENCFF702FFH, ENCFF720AUK, ENCFF796JTX 6858870 ENCODE Processing Pipeline f6380b8ba63aac1a64539e12109a4fde https://www.encodeproject.org/files/ENCFF926SRD/@@download/ENCFF926SRD.bed.gz GRCh38 released experiment not submitted to GEO partially characterized antibody ENCFF119EHP bigBed narrowPeak conservative idr thresholded peaks ENCSR898XMH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZFP91-human ENCAB949JPE DNA False 2018-01-31 ENCODE 1, 2 ENCFF804BSI 554679 ENCODE Processing Pipeline 966a5a01669882e77c2c9de8e248277c https://www.encodeproject.org/files/ENCFF119EHP/@@download/ENCFF119EHP.bigBed GRCh38 released experiment not submitted to GEO partially characterized antibody ENCFF449EFC bigBed narrowPeak peaks ENCSR898XMH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZFP91-human ENCAB949JPE DNA False 2018-01-31 ENCODE 2 ENCFF926SRD 13370705 ENCODE Processing Pipeline 6293686abc9c21fdeeeb009d6f9083e1 https://www.encodeproject.org/files/ENCFF449EFC/@@download/ENCFF449EFC.bigBed GRCh38 released experiment not submitted to GEO partially characterized antibody ENCFF703UTR bigWig signal p-value ENCSR898XMH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZFP91-human ENCAB949JPE DNA False 2018-01-31 ENCODE 1, 2 ENCFF702FFH, ENCFF720AUK, ENCFF796JTX, ENCFF971SDE 1829173774 ENCODE Processing Pipeline 49cff3899f3c71fec6aab79016e7ee8a https://www.encodeproject.org/files/ENCFF703UTR/@@download/ENCFF703UTR.bigWig GRCh38 released experiment not submitted to GEO partially characterized antibody ENCFF136JZE bigBed narrowPeak peaks ENCSR898XMH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZFP91-human ENCAB949JPE DNA False 2018-01-31 ENCODE 1 ENCFF784QAW 13255959 ENCODE Processing Pipeline 8fcaa00fdda45dfd4d99cd7b217afbaf https://www.encodeproject.org/files/ENCFF136JZE/@@download/ENCFF136JZE.bigBed GRCh38 released experiment not submitted to GEO partially characterized antibody ENCFF708EXD bigWig signal p-value ENCSR898XMH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZFP91-human ENCAB949JPE DNA False 2018-01-31 ENCODE 1 ENCFF720AUK, ENCFF796JTX, ENCFF971SDE 1184857939 ENCODE Processing Pipeline 49e9a7fff18f95d4923525657268a725 https://www.encodeproject.org/files/ENCFF708EXD/@@download/ENCFF708EXD.bigWig GRCh38 released experiment not submitted to GEO partially characterized antibody ENCFF184WKZ bigWig fold change over control ENCSR898XMH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZFP91-human ENCAB949JPE DNA False 2018-01-31 ENCODE 1 ENCFF720AUK, ENCFF796JTX, ENCFF971SDE 1401230020 ENCODE Processing Pipeline 4b37fa495c345bac6ecafc76fceeb559 https://www.encodeproject.org/files/ENCFF184WKZ/@@download/ENCFF184WKZ.bigWig GRCh38 released experiment not submitted to GEO partially characterized antibody ENCFF784QAW bed narrowPeak peaks ENCSR898XMH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZFP91-human ENCAB949JPE DNA False 2018-01-31 ENCODE 1 ENCFF720AUK, ENCFF796JTX, ENCFF971SDE 7007513 ENCODE Processing Pipeline 72c2a3a4d4686051c957745f386cfee6 https://www.encodeproject.org/files/ENCFF784QAW/@@download/ENCFF784QAW.bed.gz GRCh38 released experiment not submitted to GEO partially characterized antibody ENCFF279AMR bed narrowPeak peaks ENCSR898XMH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZFP91-human ENCAB949JPE DNA False 2018-01-31 ENCODE 1, 2 ENCFF702FFH, ENCFF720AUK, ENCFF796JTX, ENCFF971SDE 7232173 ENCODE Processing Pipeline 79d5ca717d545beb80dc84ac8902dbf6 https://www.encodeproject.org/files/ENCFF279AMR/@@download/ENCFF279AMR.bed.gz GRCh38 released experiment not submitted to GEO partially characterized antibody ENCFF150ZBH bed narrowPeak optimal idr thresholded peaks ENCSR898XMH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZFP91-human ENCAB949JPE DNA False 2018-01-31 ENCODE 1, 2 ENCFF279AMR, ENCFF419RSJ, ENCFF784QAW, ENCFF926SRD 270063 ENCODE Processing Pipeline ae893670f45861e58e9a0249ed59a159 https://www.encodeproject.org/files/ENCFF150ZBH/@@download/ENCFF150ZBH.bed.gz GRCh38 released experiment not submitted to GEO partially characterized antibody ENCFF199VFN bigWig signal p-value ENCSR898XMH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZFP91-human ENCAB949JPE DNA False 2018-01-31 ENCODE 2 ENCFF702FFH, ENCFF720AUK, ENCFF796JTX 1285727063 ENCODE Processing Pipeline 3ce7a00d9767b7bf26f38966c803dddd https://www.encodeproject.org/files/ENCFF199VFN/@@download/ENCFF199VFN.bigWig GRCh38 released experiment not submitted to GEO partially characterized antibody ENCFF625ZLA bigBed narrowPeak peaks ENCSR898XMH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZFP91-human ENCAB949JPE DNA False 2018-01-31 ENCODE 1, 2 ENCFF279AMR 13169205 ENCODE Processing Pipeline cc24d3f0169d8458583a4f8145e0c751 https://www.encodeproject.org/files/ENCFF625ZLA/@@download/ENCFF625ZLA.bigBed GRCh38 released experiment not submitted to GEO partially characterized antibody ENCFF690KRI bigWig fold change over control ENCSR898XMH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZFP91-human ENCAB949JPE DNA False 2018-01-31 ENCODE 2 ENCFF702FFH, ENCFF720AUK, ENCFF796JTX 1331607286 ENCODE Processing Pipeline 2a438ec892de78203169faab93d4f40e https://www.encodeproject.org/files/ENCFF690KRI/@@download/ENCFF690KRI.bigWig GRCh38 released experiment not submitted to GEO partially characterized antibody ENCFF324PVJ bigWig fold change over control ENCSR898XMH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZFP91-human ENCAB949JPE DNA False 2018-01-31 ENCODE 1, 2 ENCFF702FFH, ENCFF720AUK, ENCFF796JTX, ENCFF971SDE 1898292943 ENCODE Processing Pipeline bc842e6959d98b11e211320b09b96b6d https://www.encodeproject.org/files/ENCFF324PVJ/@@download/ENCFF324PVJ.bigWig GRCh38 released experiment not submitted to GEO partially characterized antibody ENCFF804BSI bed narrowPeak conservative idr thresholded peaks ENCSR898XMH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZFP91-human ENCAB949JPE DNA False 2018-01-31 ENCODE 1, 2 ENCFF279AMR, ENCFF419RSJ, ENCFF784QAW, ENCFF926SRD 232019 ENCODE Processing Pipeline d04162820de4f0d8cc9199a39434f247 https://www.encodeproject.org/files/ENCFF804BSI/@@download/ENCFF804BSI.bed.gz GRCh38 released experiment not submitted to GEO partially characterized antibody ENCFF556BBJ bigBed narrowPeak optimal idr thresholded peaks ENCSR898XMH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZFP91-human ENCAB949JPE DNA False 2018-01-31 ENCODE 1, 2 ENCFF150ZBH 619949 ENCODE Processing Pipeline b44f55abc1b9230871db44328c72a041 https://www.encodeproject.org/files/ENCFF556BBJ/@@download/ENCFF556BBJ.bigBed GRCh38 released experiment not submitted to GEO partially characterized antibody ENCFF721CPJ bigWig signal p-value ENCSR898XMH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZFP91-human ENCAB949JPE DNA False 2018-01-31 ENCODE 1 ENCFF262CJE, ENCFF506DFV, ENCFF592NKP 1433298592 ENCODE Processing Pipeline 343730269ff968113cf039c6b66d47f3 https://www.encodeproject.org/files/ENCFF721CPJ/@@download/ENCFF721CPJ.bigWig hg19 released experiment not submitted to GEO partially characterized antibody ENCFF914AJQ bigWig fold change over control ENCSR898XMH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZFP91-human ENCAB949JPE DNA False 2018-01-31 ENCODE 2 ENCFF094TQU, ENCFF262CJE, ENCFF506DFV 1337354176 ENCODE Processing Pipeline 2e06d97fed821c1953e041ddd6e682b2 https://www.encodeproject.org/files/ENCFF914AJQ/@@download/ENCFF914AJQ.bigWig hg19 released experiment not submitted to GEO partially characterized antibody ENCFF456OOM bed narrowPeak peaks ENCSR898XMH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZFP91-human ENCAB949JPE DNA False 2018-01-31 ENCODE 2 ENCFF094TQU, ENCFF262CJE, ENCFF506DFV 6854542 ENCODE Processing Pipeline e6e4d52162a7d18e475756a33fdeb8b6 https://www.encodeproject.org/files/ENCFF456OOM/@@download/ENCFF456OOM.bed.gz hg19 released experiment not submitted to GEO partially characterized antibody ENCFF041RGN bigBed narrowPeak peaks ENCSR898XMH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZFP91-human ENCAB949JPE DNA False 2018-01-31 ENCODE 1, 2 ENCFF581AQD 13146541 ENCODE Processing Pipeline 7b21b29d5498bafcdf69a980988d4c26 https://www.encodeproject.org/files/ENCFF041RGN/@@download/ENCFF041RGN.bigBed hg19 released experiment not submitted to GEO partially characterized antibody ENCFF194BBM bigBed narrowPeak conservative idr thresholded peaks ENCSR898XMH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZFP91-human ENCAB949JPE DNA False 2018-01-31 ENCODE 1, 2 ENCFF277XFF 552106 ENCODE Processing Pipeline ea17cd5668fd0098e98400866fc484b2 https://www.encodeproject.org/files/ENCFF194BBM/@@download/ENCFF194BBM.bigBed hg19 released experiment not submitted to GEO partially characterized antibody ENCFF285MPA bigWig fold change over control ENCSR898XMH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZFP91-human ENCAB949JPE DNA False 2018-01-31 ENCODE 1, 2 ENCFF094TQU, ENCFF262CJE, ENCFF506DFV, ENCFF592NKP 1904504161 ENCODE Processing Pipeline 3431f07e0f49d4dbe9e1b0e2972b7524 https://www.encodeproject.org/files/ENCFF285MPA/@@download/ENCFF285MPA.bigWig hg19 released experiment not submitted to GEO partially characterized antibody ENCFF581AQD bed narrowPeak peaks ENCSR898XMH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZFP91-human ENCAB949JPE DNA False 2018-01-31 ENCODE 1, 2 ENCFF094TQU, ENCFF262CJE, ENCFF506DFV, ENCFF592NKP 7228196 ENCODE Processing Pipeline c461aab5b9f774a56dd3b5460e43bec1 https://www.encodeproject.org/files/ENCFF581AQD/@@download/ENCFF581AQD.bed.gz hg19 released experiment not submitted to GEO partially characterized antibody ENCFF277XFF bed narrowPeak conservative idr thresholded peaks ENCSR898XMH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZFP91-human ENCAB949JPE DNA False 2018-01-31 ENCODE 1, 2 ENCFF001TDO, ENCFF456OOM, ENCFF581AQD, ENCFF858GTB 231974 ENCODE Processing Pipeline a8f6ac2664609b2e863be3a413f87df1 https://www.encodeproject.org/files/ENCFF277XFF/@@download/ENCFF277XFF.bed.gz hg19 released experiment not submitted to GEO partially characterized antibody ENCFF593DKZ bigBed narrowPeak optimal idr thresholded peaks ENCSR898XMH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZFP91-human ENCAB949JPE DNA False 2018-01-31 ENCODE 1, 2 ENCFF396DNK 611941 ENCODE Processing Pipeline e794b48a5f84effb16b585858b12a1d8 https://www.encodeproject.org/files/ENCFF593DKZ/@@download/ENCFF593DKZ.bigBed hg19 released experiment not submitted to GEO partially characterized antibody ENCFF696BFQ bigWig signal p-value ENCSR898XMH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZFP91-human ENCAB949JPE DNA False 2018-01-31 ENCODE 2 ENCFF094TQU, ENCFF262CJE, ENCFF506DFV 1283869194 ENCODE Processing Pipeline bd028fe50855ec386de5c4c234de412a https://www.encodeproject.org/files/ENCFF696BFQ/@@download/ENCFF696BFQ.bigWig hg19 released experiment not submitted to GEO partially characterized antibody ENCFF042EHN bigWig signal p-value ENCSR898XMH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZFP91-human ENCAB949JPE DNA False 2018-01-31 ENCODE 1, 2 ENCFF094TQU, ENCFF262CJE, ENCFF506DFV, ENCFF592NKP 1542741927 ENCODE Processing Pipeline c9ccaa5c0aebc117672d5b82111bd9c1 https://www.encodeproject.org/files/ENCFF042EHN/@@download/ENCFF042EHN.bigWig hg19 released experiment not submitted to GEO partially characterized antibody ENCFF787SAZ bigBed narrowPeak peaks ENCSR898XMH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZFP91-human ENCAB949JPE DNA False 2018-01-31 ENCODE 1 ENCFF858GTB 13235354 ENCODE Processing Pipeline faf1a28974ade0d89918498730a46603 https://www.encodeproject.org/files/ENCFF787SAZ/@@download/ENCFF787SAZ.bigBed hg19 released experiment not submitted to GEO partially characterized antibody ENCFF195KER bigWig fold change over control ENCSR898XMH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZFP91-human ENCAB949JPE DNA False 2018-01-31 ENCODE 1 ENCFF262CJE, ENCFF506DFV, ENCFF592NKP 1413323918 ENCODE Processing Pipeline 6ec1247989b2da072a0f55b8ba56640b https://www.encodeproject.org/files/ENCFF195KER/@@download/ENCFF195KER.bigWig hg19 released experiment not submitted to GEO partially characterized antibody ENCFF664FLZ bigBed narrowPeak peaks ENCSR898XMH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZFP91-human ENCAB949JPE DNA False 2018-01-31 ENCODE 2 ENCFF456OOM 13355872 ENCODE Processing Pipeline dee819699d26a87253f1f3aad44f09fe https://www.encodeproject.org/files/ENCFF664FLZ/@@download/ENCFF664FLZ.bigBed hg19 released experiment not submitted to GEO partially characterized antibody ENCFF396DNK bed narrowPeak optimal idr thresholded peaks ENCSR898XMH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZFP91-human ENCAB949JPE DNA False 2018-01-31 ENCODE 1, 2 ENCFF001TDO, ENCFF456OOM, ENCFF581AQD, ENCFF858GTB 266711 ENCODE Processing Pipeline d6cc530832de9f014b957dd7347ce74c https://www.encodeproject.org/files/ENCFF396DNK/@@download/ENCFF396DNK.bed.gz hg19 released experiment not submitted to GEO partially characterized antibody ENCFF858GTB bed narrowPeak peaks ENCSR898XMH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZFP91-human ENCAB949JPE DNA False 2018-01-31 ENCODE 1 ENCFF262CJE, ENCFF506DFV, ENCFF592NKP 7008531 ENCODE Processing Pipeline c84638b834a4dfdbe88ee45d048f0ae4 https://www.encodeproject.org/files/ENCFF858GTB/@@download/ENCFF858GTB.bed.gz hg19 released experiment not submitted to GEO partially characterized antibody ENCFF973BII bam unfiltered alignments ENCSR086FZL ChIP-seq EFO:0002067 K562 cell line Homo sapiens KAT8-human ENCAB415SKT DNA False 2016-09-01 ENCODE 2 100 ENCFF005NCE, ENCFF807MUK, ENCFF932SKI 4268741284 ENCODE Processing Pipeline 914c9e2ab6c0df2369bb4971d697d08a https://www.encodeproject.org/files/ENCFF973BII/@@download/ENCFF973BII.bam hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking ENCFF530FKM bam unfiltered alignments ENCSR086FZL ChIP-seq EFO:0002067 K562 cell line Homo sapiens KAT8-human ENCAB415SKT DNA False 2016-09-01 ENCODE 1 100 ENCFF093OLE, ENCFF505YGU, ENCFF807MUK 4583413037 ENCODE Processing Pipeline c2e9ea76466a0a03323a02c123167fb2 https://www.encodeproject.org/files/ENCFF530FKM/@@download/ENCFF530FKM.bam hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking ENCFF093OLE fastq reads ENCSR086FZL ChIP-seq EFO:0002067 K562 cell line Homo sapiens KAT8-human ENCAB415SKT DNA False 2016-09-01 ENCODE 1 1 100 paired-ended 2 ENCFF505YGU 2154418885 Michael Snyder, Stanford f893e04eadd928f110414f8b2aba5121 SRA:SRR5111061 https://www.encodeproject.org/files/ENCFF093OLE/@@download/ENCFF093OLE.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFH/ released borderline replicate concordance, low read depth, mild to moderate bottlenecking ENCFF005NCE fastq reads ENCSR086FZL ChIP-seq EFO:0002067 K562 cell line Homo sapiens KAT8-human ENCAB415SKT DNA False 2016-09-01 ENCODE 2 1 100 paired-ended 1 ENCFF932SKI 1959720351 Michael Snyder, Stanford 1c9773d68d6e4923be459e93845f48c0 SRA:SRR5111062 https://www.encodeproject.org/files/ENCFF005NCE/@@download/ENCFF005NCE.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFF/ released borderline replicate concordance, low read depth, mild to moderate bottlenecking ENCFF505YGU fastq reads ENCSR086FZL ChIP-seq EFO:0002067 K562 cell line Homo sapiens KAT8-human ENCAB415SKT DNA False 2016-09-01 ENCODE 1 1 100 paired-ended 1 ENCFF093OLE 2095648617 Michael Snyder, Stanford 1d1ea747424d28b07101f720f2022e0f SRA:SRR5111061 https://www.encodeproject.org/files/ENCFF505YGU/@@download/ENCFF505YGU.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFF/ released borderline replicate concordance, low read depth, mild to moderate bottlenecking ENCFF932SKI fastq reads ENCSR086FZL ChIP-seq EFO:0002067 K562 cell line Homo sapiens KAT8-human ENCAB415SKT DNA False 2016-09-01 ENCODE 2 1 100 paired-ended 2 ENCFF005NCE 2015494986 Michael Snyder, Stanford 9ba58f2a5ea7a8009224a33dc563001f SRA:SRR5111062 https://www.encodeproject.org/files/ENCFF932SKI/@@download/ENCFF932SKI.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFH/ released borderline replicate concordance, low read depth, mild to moderate bottlenecking ENCFF461OLA bam alignments ENCSR086FZL ChIP-seq EFO:0002067 K562 cell line Homo sapiens KAT8-human ENCAB415SKT DNA False 2016-09-01 ENCODE 2 100 ENCFF005NCE, ENCFF807MUK, ENCFF932SKI 3146705378 ENCODE Processing Pipeline 0f905647ac8e561ba2789e60ce7dd7d7 https://www.encodeproject.org/files/ENCFF461OLA/@@download/ENCFF461OLA.bam hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking ENCFF207OPF bam alignments ENCSR086FZL ChIP-seq EFO:0002067 K562 cell line Homo sapiens KAT8-human ENCAB415SKT DNA False 2016-09-01 ENCODE 1 100 ENCFF093OLE, ENCFF505YGU, ENCFF807MUK 3516175934 ENCODE Processing Pipeline 2a2a853e3f5f8c4483f2cf97e3456681 https://www.encodeproject.org/files/ENCFF207OPF/@@download/ENCFF207OPF.bam hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking ENCFF193LDF bigWig signal p-value ENCSR086FZL ChIP-seq EFO:0002067 K562 cell line Homo sapiens KAT8-human ENCAB415SKT DNA False 2016-09-01 ENCODE 1 ENCFF207OPF, ENCFF581ZJL 953660042 ENCODE Processing Pipeline 551a3e6cfbcee1ef6236eb3a65bae219 https://www.encodeproject.org/files/ENCFF193LDF/@@download/ENCFF193LDF.bigWig hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking ENCFF286HOI bigWig signal p-value ENCSR086FZL ChIP-seq EFO:0002067 K562 cell line Homo sapiens KAT8-human ENCAB415SKT DNA False 2016-09-01 ENCODE 2 ENCFF461OLA, ENCFF581ZJL 1019713578 ENCODE Processing Pipeline 4d278f94f5c37b5943aeb1b7fdbda7b6 https://www.encodeproject.org/files/ENCFF286HOI/@@download/ENCFF286HOI.bigWig hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking ENCFF689KXB bigWig signal p-value ENCSR086FZL ChIP-seq EFO:0002067 K562 cell line Homo sapiens KAT8-human ENCAB415SKT DNA False 2016-09-01 ENCODE 1, 2 ENCFF207OPF, ENCFF461OLA, ENCFF581ZJL 1502112588 ENCODE Processing Pipeline a3d4f4d48ba169eef31c6990f9d1759b https://www.encodeproject.org/files/ENCFF689KXB/@@download/ENCFF689KXB.bigWig hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking ENCFF251TLL bigWig fold change over control ENCSR086FZL ChIP-seq EFO:0002067 K562 cell line Homo sapiens KAT8-human ENCAB415SKT DNA False 2016-09-01 ENCODE 1 ENCFF207OPF, ENCFF581ZJL 1065003607 ENCODE Processing Pipeline 200bd578105bad150ab3d830b69bf016 https://www.encodeproject.org/files/ENCFF251TLL/@@download/ENCFF251TLL.bigWig hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking ENCFF521DBV bigWig fold change over control ENCSR086FZL ChIP-seq EFO:0002067 K562 cell line Homo sapiens KAT8-human ENCAB415SKT DNA False 2016-09-01 ENCODE 2 ENCFF461OLA, ENCFF581ZJL 997850846 ENCODE Processing Pipeline f28a93bd717e2b1efa26f43e8ad06d14 https://www.encodeproject.org/files/ENCFF521DBV/@@download/ENCFF521DBV.bigWig hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking ENCFF068JOG bigWig fold change over control ENCSR086FZL ChIP-seq EFO:0002067 K562 cell line Homo sapiens KAT8-human ENCAB415SKT DNA False 2016-09-01 ENCODE 1, 2 ENCFF207OPF, ENCFF461OLA, ENCFF581ZJL 1489017332 ENCODE Processing Pipeline 9f8585a5355de8583898074fc6f9dd04 https://www.encodeproject.org/files/ENCFF068JOG/@@download/ENCFF068JOG.bigWig hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking ENCFF671OTI bed narrowPeak peaks ENCSR086FZL ChIP-seq EFO:0002067 K562 cell line Homo sapiens KAT8-human ENCAB415SKT DNA False 2016-09-01 ENCODE 1 ENCFF207OPF, ENCFF581ZJL 6525471 ENCODE Processing Pipeline a33f2e2aa0d57c1b11a69c5be5a45e49 https://www.encodeproject.org/files/ENCFF671OTI/@@download/ENCFF671OTI.bed.gz hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking ENCFF527DAX bigBed narrowPeak peaks ENCSR086FZL ChIP-seq EFO:0002067 K562 cell line Homo sapiens KAT8-human ENCAB415SKT DNA False 2016-09-01 ENCODE 1 ENCFF671OTI 13292539 ENCODE Processing Pipeline 6d90742f0e44f39cb2e57c6adf34370d https://www.encodeproject.org/files/ENCFF527DAX/@@download/ENCFF527DAX.bigBed hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking ENCFF189YGL bigBed narrowPeak peaks ENCSR086FZL ChIP-seq EFO:0002067 K562 cell line Homo sapiens KAT8-human ENCAB415SKT DNA False 2016-09-01 ENCODE 1, 2 ENCFF763LNG 13112441 ENCODE Processing Pipeline 679db2473a7d9632d6aea9172c8ea50a https://www.encodeproject.org/files/ENCFF189YGL/@@download/ENCFF189YGL.bigBed hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking ENCFF023FAR bed narrowPeak peaks ENCSR086FZL ChIP-seq EFO:0002067 K562 cell line Homo sapiens KAT8-human ENCAB415SKT DNA False 2016-09-01 ENCODE 2 ENCFF461OLA, ENCFF581ZJL 6198170 ENCODE Processing Pipeline 5c9f75fe0e7e582caaf556099b29c7c9 https://www.encodeproject.org/files/ENCFF023FAR/@@download/ENCFF023FAR.bed.gz hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking ENCFF763LNG bed narrowPeak peaks ENCSR086FZL ChIP-seq EFO:0002067 K562 cell line Homo sapiens KAT8-human ENCAB415SKT DNA False 2016-09-01 ENCODE 1, 2 ENCFF207OPF, ENCFF461OLA, ENCFF581ZJL 6962841 ENCODE Processing Pipeline a1a112d8ec82a48b8cd6673b117f2837 https://www.encodeproject.org/files/ENCFF763LNG/@@download/ENCFF763LNG.bed.gz hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking ENCFF702ZWZ bigBed narrowPeak peaks ENCSR086FZL ChIP-seq EFO:0002067 K562 cell line Homo sapiens KAT8-human ENCAB415SKT DNA False 2016-09-01 ENCODE 2 ENCFF023FAR 11135940 ENCODE Processing Pipeline 0f20fdca6d730f0b258f0c8e4d1f3e50 https://www.encodeproject.org/files/ENCFF702ZWZ/@@download/ENCFF702ZWZ.bigBed hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking ENCFF567GFO bed narrowPeak conservative idr thresholded peaks ENCSR086FZL ChIP-seq EFO:0002067 K562 cell line Homo sapiens KAT8-human ENCAB415SKT DNA False 2016-09-01 ENCODE 1, 2 ENCFF001TDO, ENCFF023FAR, ENCFF671OTI, ENCFF763LNG 26218 ENCODE Processing Pipeline b296639d910bc390f29a14b93aa2e4ff https://www.encodeproject.org/files/ENCFF567GFO/@@download/ENCFF567GFO.bed.gz hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking ENCFF062WWV bigBed narrowPeak conservative idr thresholded peaks ENCSR086FZL ChIP-seq EFO:0002067 K562 cell line Homo sapiens KAT8-human ENCAB415SKT DNA False 2016-09-01 ENCODE 1, 2 ENCFF567GFO 97781 ENCODE Processing Pipeline 95ad534fe2793873df99ee1c1c7e610a https://www.encodeproject.org/files/ENCFF062WWV/@@download/ENCFF062WWV.bigBed hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking ENCFF772QPO bed narrowPeak optimal idr thresholded peaks ENCSR086FZL ChIP-seq EFO:0002067 K562 cell line Homo sapiens KAT8-human ENCAB415SKT DNA False 2016-09-01 ENCODE 1, 2 ENCFF001TDO, ENCFF023FAR, ENCFF671OTI, ENCFF763LNG 44388 ENCODE Processing Pipeline d43ee2f381e8065adaf48e7520a7473a https://www.encodeproject.org/files/ENCFF772QPO/@@download/ENCFF772QPO.bed.gz hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking ENCFF574JYD bigBed narrowPeak optimal idr thresholded peaks ENCSR086FZL ChIP-seq EFO:0002067 K562 cell line Homo sapiens KAT8-human ENCAB415SKT DNA False 2016-09-01 ENCODE 1, 2 ENCFF772QPO 124035 ENCODE Processing Pipeline c8059e9758958cc06169c327dc5057e8 https://www.encodeproject.org/files/ENCFF574JYD/@@download/ENCFF574JYD.bigBed hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking ENCFF569IGT bam unfiltered alignments ENCSR086FZL ChIP-seq EFO:0002067 K562 cell line Homo sapiens KAT8-human ENCAB415SKT DNA False 2016-09-01 ENCODE 2 100 ENCFF005NCE, ENCFF643CGH, ENCFF932SKI 4271188208 ENCODE Processing Pipeline f690d5787f92da44473bd761bc163f52 https://www.encodeproject.org/files/ENCFF569IGT/@@download/ENCFF569IGT.bam GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking ENCFF098EFO bam unfiltered alignments ENCSR086FZL ChIP-seq EFO:0002067 K562 cell line Homo sapiens KAT8-human ENCAB415SKT DNA False 2016-09-01 ENCODE 1 100 ENCFF093OLE, ENCFF505YGU, ENCFF643CGH 4586896492 ENCODE Processing Pipeline 65b4ed103e60f118f498354fe389666b https://www.encodeproject.org/files/ENCFF098EFO/@@download/ENCFF098EFO.bam GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking ENCFF578CKQ bam alignments ENCSR086FZL ChIP-seq EFO:0002067 K562 cell line Homo sapiens KAT8-human ENCAB415SKT DNA False 2016-09-01 ENCODE 2 100 ENCFF005NCE, ENCFF643CGH, ENCFF932SKI 3147421293 ENCODE Processing Pipeline 981226c9e3eae97907e9176eb13d3d28 https://www.encodeproject.org/files/ENCFF578CKQ/@@download/ENCFF578CKQ.bam GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking ENCFF707JIA bam alignments ENCSR086FZL ChIP-seq EFO:0002067 K562 cell line Homo sapiens KAT8-human ENCAB415SKT DNA False 2016-09-01 ENCODE 1 100 ENCFF093OLE, ENCFF505YGU, ENCFF643CGH 3517687856 ENCODE Processing Pipeline 6f90e43bd8e67a3b6aafd8a3deaf59f4 https://www.encodeproject.org/files/ENCFF707JIA/@@download/ENCFF707JIA.bam GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking ENCFF293TPN bigWig signal p-value ENCSR086FZL ChIP-seq EFO:0002067 K562 cell line Homo sapiens KAT8-human ENCAB415SKT DNA False 2016-09-01 ENCODE 1 ENCFF707JIA, ENCFF910IKB 943978691 ENCODE Processing Pipeline 9d69cde36bd8bcfec35c1323876417af https://www.encodeproject.org/files/ENCFF293TPN/@@download/ENCFF293TPN.bigWig GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking ENCFF487UBI bigWig signal p-value ENCSR086FZL ChIP-seq EFO:0002067 K562 cell line Homo sapiens KAT8-human ENCAB415SKT DNA False 2016-09-01 ENCODE 2 ENCFF578CKQ, ENCFF910IKB 887945647 ENCODE Processing Pipeline b2fcaa05d810da5e5b4e9bd5c45ccda7 https://www.encodeproject.org/files/ENCFF487UBI/@@download/ENCFF487UBI.bigWig GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking ENCFF842NPP bigWig signal p-value ENCSR086FZL ChIP-seq EFO:0002067 K562 cell line Homo sapiens KAT8-human ENCAB415SKT DNA False 2016-09-01 ENCODE 1, 2 ENCFF578CKQ, ENCFF707JIA, ENCFF910IKB 1455489368 ENCODE Processing Pipeline 91b40955ed1d90440719cec90dc06e55 https://www.encodeproject.org/files/ENCFF842NPP/@@download/ENCFF842NPP.bigWig GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking ENCFF436AWY bigWig fold change over control ENCSR086FZL ChIP-seq EFO:0002067 K562 cell line Homo sapiens KAT8-human ENCAB415SKT DNA False 2016-09-01 ENCODE 1 ENCFF707JIA, ENCFF910IKB 1065000085 ENCODE Processing Pipeline 044ecc90f0c16c37f3f3662efde6bfca https://www.encodeproject.org/files/ENCFF436AWY/@@download/ENCFF436AWY.bigWig GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking ENCFF731BPQ bigWig fold change over control ENCSR086FZL ChIP-seq EFO:0002067 K562 cell line Homo sapiens KAT8-human ENCAB415SKT DNA False 2016-09-01 ENCODE 2 ENCFF578CKQ, ENCFF910IKB 992138009 ENCODE Processing Pipeline df2c2025ee07563f19a8c917f8500699 https://www.encodeproject.org/files/ENCFF731BPQ/@@download/ENCFF731BPQ.bigWig GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking ENCFF352FRL bigWig fold change over control ENCSR086FZL ChIP-seq EFO:0002067 K562 cell line Homo sapiens KAT8-human ENCAB415SKT DNA False 2016-09-01 ENCODE 1, 2 ENCFF578CKQ, ENCFF707JIA, ENCFF910IKB 1515218348 ENCODE Processing Pipeline 177bac79f70cb45f9c64c39b3e56e94e https://www.encodeproject.org/files/ENCFF352FRL/@@download/ENCFF352FRL.bigWig GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking ENCFF765MEY bed narrowPeak peaks ENCSR086FZL ChIP-seq EFO:0002067 K562 cell line Homo sapiens KAT8-human ENCAB415SKT DNA False 2016-09-01 ENCODE 1 ENCFF707JIA, ENCFF910IKB 6375117 ENCODE Processing Pipeline 8a90718803bbbd2b835c711fd2fcd7c1 https://www.encodeproject.org/files/ENCFF765MEY/@@download/ENCFF765MEY.bed.gz GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking ENCFF549QBY bed narrowPeak peaks ENCSR086FZL ChIP-seq EFO:0002067 K562 cell line Homo sapiens KAT8-human ENCAB415SKT DNA False 2016-09-01 ENCODE 2 ENCFF578CKQ, ENCFF910IKB 6057099 ENCODE Processing Pipeline 950b843f21e92580d952e40063f1dddc https://www.encodeproject.org/files/ENCFF549QBY/@@download/ENCFF549QBY.bed.gz GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking ENCFF039XQE bed narrowPeak peaks ENCSR086FZL ChIP-seq EFO:0002067 K562 cell line Homo sapiens KAT8-human ENCAB415SKT DNA False 2016-09-01 ENCODE 1, 2 ENCFF578CKQ, ENCFF707JIA, ENCFF910IKB 6885170 ENCODE Processing Pipeline dcc2a31ca150564a4893c47cbee3f8ae https://www.encodeproject.org/files/ENCFF039XQE/@@download/ENCFF039XQE.bed.gz GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking ENCFF023INC bigBed narrowPeak peaks ENCSR086FZL ChIP-seq EFO:0002067 K562 cell line Homo sapiens KAT8-human ENCAB415SKT DNA False 2016-09-01 ENCODE 1 ENCFF765MEY 13297816 ENCODE Processing Pipeline cf0ca4c1da6ccaf22248c27de01ffa85 https://www.encodeproject.org/files/ENCFF023INC/@@download/ENCFF023INC.bigBed GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking ENCFF576XWS bigBed narrowPeak peaks ENCSR086FZL ChIP-seq EFO:0002067 K562 cell line Homo sapiens KAT8-human ENCAB415SKT DNA False 2016-09-01 ENCODE 2 ENCFF549QBY 11136806 ENCODE Processing Pipeline 1c0277a4835f703e49a17b0b8ab8f533 https://www.encodeproject.org/files/ENCFF576XWS/@@download/ENCFF576XWS.bigBed GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking ENCFF887BJK bigBed narrowPeak peaks ENCSR086FZL ChIP-seq EFO:0002067 K562 cell line Homo sapiens KAT8-human ENCAB415SKT DNA False 2016-09-01 ENCODE 1, 2 ENCFF039XQE 13117741 ENCODE Processing Pipeline 8a3a65765612cc0e7a96f10b7c984a6f https://www.encodeproject.org/files/ENCFF887BJK/@@download/ENCFF887BJK.bigBed GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking ENCFF549HMO bed narrowPeak conservative idr thresholded peaks ENCSR086FZL ChIP-seq EFO:0002067 K562 cell line Homo sapiens KAT8-human ENCAB415SKT DNA False 2016-09-01 ENCODE 1, 2 ENCFF039XQE, ENCFF419RSJ, ENCFF549QBY, ENCFF765MEY 25666 ENCODE Processing Pipeline c31e8d45e093f74fb6a7c5a7e1990ef2 https://www.encodeproject.org/files/ENCFF549HMO/@@download/ENCFF549HMO.bed.gz GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking ENCFF560OXB bigBed narrowPeak conservative idr thresholded peaks ENCSR086FZL ChIP-seq EFO:0002067 K562 cell line Homo sapiens KAT8-human ENCAB415SKT DNA False 2016-09-01 ENCODE 1, 2 ENCFF549HMO 97082 ENCODE Processing Pipeline 014b116632805b0d25c0d419eaab5866 https://www.encodeproject.org/files/ENCFF560OXB/@@download/ENCFF560OXB.bigBed GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking ENCFF207ZEK bed narrowPeak optimal idr thresholded peaks ENCSR086FZL ChIP-seq EFO:0002067 K562 cell line Homo sapiens KAT8-human ENCAB415SKT DNA False 2016-09-01 ENCODE 1, 2 ENCFF039XQE, ENCFF419RSJ, ENCFF549QBY, ENCFF765MEY 45021 ENCODE Processing Pipeline 55e40305c16312e404edd86ba8de8bc2 https://www.encodeproject.org/files/ENCFF207ZEK/@@download/ENCFF207ZEK.bed.gz GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking ENCFF487FAQ bigBed narrowPeak optimal idr thresholded peaks ENCSR086FZL ChIP-seq EFO:0002067 K562 cell line Homo sapiens KAT8-human ENCAB415SKT DNA False 2016-09-01 ENCODE 1, 2 ENCFF207ZEK 125586 ENCODE Processing Pipeline 49b4592535abc2b39cbc31161d1e3341 https://www.encodeproject.org/files/ENCFF487FAQ/@@download/ENCFF487FAQ.bigBed GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking ENCFF514ZDJ fastq reads ENCSR390VGH ChIP-seq EFO:0002067 K562 cell line Homo sapiens MNT-human ENCAB541WYB DNA False 2017-01-27 ENCODE 1 1 100 paired-ended 1 ENCFF249PNP 2421911616 Michael Snyder, Stanford 9105c8ec245a2214b98d36cd91eff470 SRA:SRR6213558 https://www.encodeproject.org/files/ENCFF514ZDJ/@@download/ENCFF514ZDJ.fastq.gz Illumina HiSeq 4000 /files/ENCFF498JMO/ released mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF756SRO fastq reads ENCSR390VGH ChIP-seq EFO:0002067 K562 cell line Homo sapiens MNT-human ENCAB541WYB DNA False 2017-01-27 ENCODE 2 1 100 paired-ended 1 ENCFF615SHE 2815009659 Michael Snyder, Stanford b6e39f5fb86e540c46f6af1ef456d313 SRA:SRR6213557 https://www.encodeproject.org/files/ENCFF756SRO/@@download/ENCFF756SRO.fastq.gz Illumina HiSeq 4000 /files/ENCFF259GQA/ released mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF615SHE fastq reads ENCSR390VGH ChIP-seq EFO:0002067 K562 cell line Homo sapiens MNT-human ENCAB541WYB DNA False 2017-01-27 ENCODE 2 1 100 paired-ended 2 ENCFF756SRO 3393189355 Michael Snyder, Stanford 3cea6c67beea76dd501085e1d9031470 SRA:SRR6213557 https://www.encodeproject.org/files/ENCFF615SHE/@@download/ENCFF615SHE.fastq.gz Illumina HiSeq 4000 /files/ENCFF837MIV/ released mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF249PNP fastq reads ENCSR390VGH ChIP-seq EFO:0002067 K562 cell line Homo sapiens MNT-human ENCAB541WYB DNA False 2017-01-27 ENCODE 1 1 100 paired-ended 2 ENCFF514ZDJ 2888058502 Michael Snyder, Stanford e205516a94f2068d8f916585048ba5dd SRA:SRR6213558 https://www.encodeproject.org/files/ENCFF249PNP/@@download/ENCFF249PNP.fastq.gz Illumina HiSeq 4000 /files/ENCFF502GTS/ released mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF398EEB bam unfiltered alignments ENCSR390VGH ChIP-seq EFO:0002067 K562 cell line Homo sapiens MNT-human ENCAB541WYB DNA False 2017-01-27 ENCODE 1 100 ENCFF249PNP, ENCFF514ZDJ, ENCFF643CGH 4808480790 ENCODE Processing Pipeline 66ddbee0ae07cc118244e6a9ad047774 https://www.encodeproject.org/files/ENCFF398EEB/@@download/ENCFF398EEB.bam GRCh38 released mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF141ICN bam unfiltered alignments ENCSR390VGH ChIP-seq EFO:0002067 K562 cell line Homo sapiens MNT-human ENCAB541WYB DNA False 2017-01-27 ENCODE 1 100 ENCFF249PNP, ENCFF514ZDJ, ENCFF807MUK 4806165138 ENCODE Processing Pipeline 1de542ac41188a3a90bc00ef01ebf8e2 https://www.encodeproject.org/files/ENCFF141ICN/@@download/ENCFF141ICN.bam hg19 released mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF475KIY bam unfiltered alignments ENCSR390VGH ChIP-seq EFO:0002067 K562 cell line Homo sapiens MNT-human ENCAB541WYB DNA False 2017-01-27 ENCODE 2 100 ENCFF615SHE, ENCFF756SRO, ENCFF807MUK 5519125696 ENCODE Processing Pipeline 72660f302a47817515b103d72d7b9f7c https://www.encodeproject.org/files/ENCFF475KIY/@@download/ENCFF475KIY.bam hg19 released mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF960KBQ bam unfiltered alignments ENCSR390VGH ChIP-seq EFO:0002067 K562 cell line Homo sapiens MNT-human ENCAB541WYB DNA False 2017-01-27 ENCODE 2 100 ENCFF615SHE, ENCFF643CGH, ENCFF756SRO 5521482102 ENCODE Processing Pipeline cd612a5a99ae05423256809460defe88 https://www.encodeproject.org/files/ENCFF960KBQ/@@download/ENCFF960KBQ.bam GRCh38 released mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF318HXV bam alignments ENCSR390VGH ChIP-seq EFO:0002067 K562 cell line Homo sapiens MNT-human ENCAB541WYB DNA False 2017-01-27 ENCODE 2 100 ENCFF615SHE, ENCFF756SRO, ENCFF807MUK 3531474467 ENCODE Processing Pipeline 7790ae4437df262ae6ade9e76d2d5395 https://www.encodeproject.org/files/ENCFF318HXV/@@download/ENCFF318HXV.bam hg19 released mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF803TYM bam alignments ENCSR390VGH ChIP-seq EFO:0002067 K562 cell line Homo sapiens MNT-human ENCAB541WYB DNA False 2017-01-27 ENCODE 1 100 ENCFF249PNP, ENCFF514ZDJ, ENCFF643CGH 3236115782 ENCODE Processing Pipeline 2588f1603f43277f7ae16b1471fbff3d https://www.encodeproject.org/files/ENCFF803TYM/@@download/ENCFF803TYM.bam GRCh38 released mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF899ORC bam alignments ENCSR390VGH ChIP-seq EFO:0002067 K562 cell line Homo sapiens MNT-human ENCAB541WYB DNA False 2017-01-27 ENCODE 1 100 ENCFF249PNP, ENCFF514ZDJ, ENCFF807MUK 3234128108 ENCODE Processing Pipeline b4353341d5840348fb38fdfa595dc17e https://www.encodeproject.org/files/ENCFF899ORC/@@download/ENCFF899ORC.bam hg19 released mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF698VVG bam alignments ENCSR390VGH ChIP-seq EFO:0002067 K562 cell line Homo sapiens MNT-human ENCAB541WYB DNA False 2017-01-27 ENCODE 2 100 ENCFF615SHE, ENCFF643CGH, ENCFF756SRO 3533870594 ENCODE Processing Pipeline 63f416f989a93e24f359aca7577a4f5e https://www.encodeproject.org/files/ENCFF698VVG/@@download/ENCFF698VVG.bam GRCh38 released mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF761NRP bigWig signal p-value ENCSR390VGH ChIP-seq EFO:0002067 K562 cell line Homo sapiens MNT-human ENCAB541WYB DNA False 2017-01-27 ENCODE 1 ENCFF160VXC, ENCFF899ORC 982376119 ENCODE Processing Pipeline ebaef32537b86c19186a02081917d780 https://www.encodeproject.org/files/ENCFF761NRP/@@download/ENCFF761NRP.bigWig hg19 released mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF260JMM bed narrowPeak peaks ENCSR390VGH ChIP-seq EFO:0002067 K562 cell line Homo sapiens MNT-human ENCAB541WYB DNA False 2017-01-27 ENCODE 2 ENCFF318HXV, ENCFF834TUP 7100744 ENCODE Processing Pipeline 088d643e4c1e293ba708b5d62b327189 https://www.encodeproject.org/files/ENCFF260JMM/@@download/ENCFF260JMM.bed.gz hg19 released mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF431KXB bed narrowPeak peaks ENCSR390VGH ChIP-seq EFO:0002067 K562 cell line Homo sapiens MNT-human ENCAB541WYB DNA False 2017-01-27 ENCODE 1, 2 ENCFF160VXC, ENCFF318HXV, ENCFF834TUP, ENCFF899ORC 7285470 ENCODE Processing Pipeline 45bdf9d882d751aef8b239239586d983 https://www.encodeproject.org/files/ENCFF431KXB/@@download/ENCFF431KXB.bed.gz hg19 released mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF673IPX bigBed narrowPeak peaks ENCSR390VGH ChIP-seq EFO:0002067 K562 cell line Homo sapiens MNT-human ENCAB541WYB DNA False 2017-01-27 ENCODE 2 ENCFF260JMM 12810944 ENCODE Processing Pipeline a6602f9849463e3e9bf00f13396d5095 https://www.encodeproject.org/files/ENCFF673IPX/@@download/ENCFF673IPX.bigBed hg19 released mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF485QVW bigBed narrowPeak peaks ENCSR390VGH ChIP-seq EFO:0002067 K562 cell line Homo sapiens MNT-human ENCAB541WYB DNA False 2017-01-27 ENCODE 1 ENCFF191KTX 13209165 ENCODE Processing Pipeline 7819de6ef71923fdba04ed7ddc41224c https://www.encodeproject.org/files/ENCFF485QVW/@@download/ENCFF485QVW.bigBed hg19 released mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF817VGB bigBed narrowPeak peaks ENCSR390VGH ChIP-seq EFO:0002067 K562 cell line Homo sapiens MNT-human ENCAB541WYB DNA False 2017-01-27 ENCODE 1, 2 ENCFF431KXB 12958147 ENCODE Processing Pipeline 989582059dc97b69dcad01b02309e23c https://www.encodeproject.org/files/ENCFF817VGB/@@download/ENCFF817VGB.bigBed hg19 released mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF401QYL bigBed narrowPeak optimal idr thresholded peaks ENCSR390VGH ChIP-seq EFO:0002067 K562 cell line Homo sapiens MNT-human ENCAB541WYB DNA False 2017-01-27 ENCODE 1, 2 ENCFF059ONJ 1475536 ENCODE Processing Pipeline 763efdc1175a7edaab97ff2ae57e08cf https://www.encodeproject.org/files/ENCFF401QYL/@@download/ENCFF401QYL.bigBed hg19 released mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF146HYH bigWig signal p-value ENCSR390VGH ChIP-seq EFO:0002067 K562 cell line Homo sapiens MNT-human ENCAB541WYB DNA False 2017-01-27 ENCODE 2 ENCFF318HXV, ENCFF834TUP 1011588117 ENCODE Processing Pipeline 342a590559f47048eeb78b9843e62b96 https://www.encodeproject.org/files/ENCFF146HYH/@@download/ENCFF146HYH.bigWig hg19 released mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF503JZG bigWig signal p-value ENCSR390VGH ChIP-seq EFO:0002067 K562 cell line Homo sapiens MNT-human ENCAB541WYB DNA False 2017-01-27 ENCODE 1, 2 ENCFF160VXC, ENCFF318HXV, ENCFF834TUP, ENCFF899ORC 1836197092 ENCODE Processing Pipeline 94c6c0578f50c3bcfaf5d55b26c1a864 https://www.encodeproject.org/files/ENCFF503JZG/@@download/ENCFF503JZG.bigWig hg19 released mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF318WPO bigWig fold change over control ENCSR390VGH ChIP-seq EFO:0002067 K562 cell line Homo sapiens MNT-human ENCAB541WYB DNA False 2017-01-27 ENCODE 1 ENCFF160VXC, ENCFF899ORC 1224297782 ENCODE Processing Pipeline 525712702acf72483119ce3738b30d41 https://www.encodeproject.org/files/ENCFF318WPO/@@download/ENCFF318WPO.bigWig hg19 released mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF122KIF bigWig fold change over control ENCSR390VGH ChIP-seq EFO:0002067 K562 cell line Homo sapiens MNT-human ENCAB541WYB DNA False 2017-01-27 ENCODE 2 ENCFF318HXV, ENCFF834TUP 1310401311 ENCODE Processing Pipeline 71408832c760f8ad09648e53422ba101 https://www.encodeproject.org/files/ENCFF122KIF/@@download/ENCFF122KIF.bigWig hg19 released mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF191KTX bed narrowPeak peaks ENCSR390VGH ChIP-seq EFO:0002067 K562 cell line Homo sapiens MNT-human ENCAB541WYB DNA False 2017-01-27 ENCODE 1 ENCFF160VXC, ENCFF899ORC 6850176 ENCODE Processing Pipeline d6d781cc28f8d5798a2b30c9215d71be https://www.encodeproject.org/files/ENCFF191KTX/@@download/ENCFF191KTX.bed.gz hg19 released mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF638KYE bigWig fold change over control ENCSR390VGH ChIP-seq EFO:0002067 K562 cell line Homo sapiens MNT-human ENCAB541WYB DNA False 2017-01-27 ENCODE 1, 2 ENCFF160VXC, ENCFF318HXV, ENCFF834TUP, ENCFF899ORC 2171017618 ENCODE Processing Pipeline 709bfd30d259099ee8633455e9f79cb3 https://www.encodeproject.org/files/ENCFF638KYE/@@download/ENCFF638KYE.bigWig hg19 released mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF059ONJ bed narrowPeak optimal idr thresholded peaks ENCSR390VGH ChIP-seq EFO:0002067 K562 cell line Homo sapiens MNT-human ENCAB541WYB DNA False 2017-01-27 ENCODE 1, 2 ENCFF001TDO, ENCFF191KTX, ENCFF260JMM, ENCFF431KXB 698405 ENCODE Processing Pipeline b90c66a28237946beae947f6c6d02cdd https://www.encodeproject.org/files/ENCFF059ONJ/@@download/ENCFF059ONJ.bed.gz hg19 released mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF832QZZ bigWig signal p-value ENCSR390VGH ChIP-seq EFO:0002067 K562 cell line Homo sapiens MNT-human ENCAB541WYB DNA False 2017-01-27 ENCODE 1 ENCFF803TYM 1095230421 ENCODE Processing Pipeline 77968df2e78a193a6aeecffb1e77bef2 https://www.encodeproject.org/files/ENCFF832QZZ/@@download/ENCFF832QZZ.bigWig GRCh38 released mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF720WDL bigWig signal p-value ENCSR390VGH ChIP-seq EFO:0002067 K562 cell line Homo sapiens MNT-human ENCAB541WYB DNA False 2017-01-27 ENCODE 2 ENCFF698VVG 1029595324 ENCODE Processing Pipeline bbb32c7519f081a7c290bec6d79d4394 https://www.encodeproject.org/files/ENCFF720WDL/@@download/ENCFF720WDL.bigWig GRCh38 released mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF885QLV bed narrowPeak peaks ENCSR390VGH ChIP-seq EFO:0002067 K562 cell line Homo sapiens MNT-human ENCAB541WYB DNA False 2017-01-27 ENCODE 2 ENCFF698VVG 7159991 ENCODE Processing Pipeline 83a3d7a31df632d5bf2ccb1b30e56313 https://www.encodeproject.org/files/ENCFF885QLV/@@download/ENCFF885QLV.bed.gz GRCh38 released mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF553CUJ bigWig fold change over control ENCSR390VGH ChIP-seq EFO:0002067 K562 cell line Homo sapiens MNT-human ENCAB541WYB DNA False 2017-01-27 ENCODE 1 ENCFF803TYM 1226300942 ENCODE Processing Pipeline 0b4f491bd20ed843639d5655168fd4a8 https://www.encodeproject.org/files/ENCFF553CUJ/@@download/ENCFF553CUJ.bigWig GRCh38 released mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF135BHH bigWig fold change over control ENCSR390VGH ChIP-seq EFO:0002067 K562 cell line Homo sapiens MNT-human ENCAB541WYB DNA False 2017-01-27 ENCODE 2 ENCFF698VVG 1301421735 ENCODE Processing Pipeline 01aa0934b51bfd98c22b84865bbcf5c0 https://www.encodeproject.org/files/ENCFF135BHH/@@download/ENCFF135BHH.bigWig GRCh38 released mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF896XFU bigWig signal p-value ENCSR390VGH ChIP-seq EFO:0002067 K562 cell line Homo sapiens MNT-human ENCAB541WYB DNA False 2017-01-27 ENCODE 1, 2 ENCFF698VVG, ENCFF803TYM 1822160833 ENCODE Processing Pipeline 712ac551e1ffb9ea95a40e3608301d48 https://www.encodeproject.org/files/ENCFF896XFU/@@download/ENCFF896XFU.bigWig GRCh38 released mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF666QUF bigBed narrowPeak peaks ENCSR390VGH ChIP-seq EFO:0002067 K562 cell line Homo sapiens MNT-human ENCAB541WYB DNA False 2017-01-27 ENCODE 2 ENCFF885QLV 12892567 ENCODE Processing Pipeline fd0f1e79cbd40364d103c7b437a6f3fe https://www.encodeproject.org/files/ENCFF666QUF/@@download/ENCFF666QUF.bigBed GRCh38 released mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF131DAH bigBed narrowPeak peaks ENCSR390VGH ChIP-seq EFO:0002067 K562 cell line Homo sapiens MNT-human ENCAB541WYB DNA False 2017-01-27 ENCODE 1, 2 ENCFF415QOB 12955918 ENCODE Processing Pipeline f5e625b055174fe075400b0edeaa8fdf https://www.encodeproject.org/files/ENCFF131DAH/@@download/ENCFF131DAH.bigBed GRCh38 released mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF307NZC bigWig fold change over control ENCSR390VGH ChIP-seq EFO:0002067 K562 cell line Homo sapiens MNT-human ENCAB541WYB DNA False 2017-01-27 ENCODE 1, 2 ENCFF698VVG, ENCFF803TYM 2163771895 ENCODE Processing Pipeline 7d1eb0eec9281cab209ec3ab08d7279e https://www.encodeproject.org/files/ENCFF307NZC/@@download/ENCFF307NZC.bigWig GRCh38 released mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF682WFJ bed narrowPeak peaks ENCSR390VGH ChIP-seq EFO:0002067 K562 cell line Homo sapiens MNT-human ENCAB541WYB DNA False 2017-01-27 ENCODE 1 ENCFF803TYM 6857662 ENCODE Processing Pipeline 45cced03fe00f90cfc53814c79c64799 https://www.encodeproject.org/files/ENCFF682WFJ/@@download/ENCFF682WFJ.bed.gz GRCh38 released mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF779KIK bigBed narrowPeak peaks ENCSR390VGH ChIP-seq EFO:0002067 K562 cell line Homo sapiens MNT-human ENCAB541WYB DNA False 2017-01-27 ENCODE 1 ENCFF682WFJ 13227024 ENCODE Processing Pipeline bb003ad3b11229ba9ef34c3cfd703f30 https://www.encodeproject.org/files/ENCFF779KIK/@@download/ENCFF779KIK.bigBed GRCh38 released mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF415QOB bed narrowPeak peaks ENCSR390VGH ChIP-seq EFO:0002067 K562 cell line Homo sapiens MNT-human ENCAB541WYB DNA False 2017-01-27 ENCODE 1, 2 ENCFF698VVG, ENCFF803TYM 7278240 ENCODE Processing Pipeline 963f05c1b890c4068741c4b4bb694c2e https://www.encodeproject.org/files/ENCFF415QOB/@@download/ENCFF415QOB.bed.gz GRCh38 released mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF926CRV bed narrowPeak optimal idr thresholded peaks ENCSR390VGH ChIP-seq EFO:0002067 K562 cell line Homo sapiens MNT-human ENCAB541WYB DNA False 2017-01-27 ENCODE 1, 2 ENCFF415QOB, ENCFF419RSJ, ENCFF682WFJ, ENCFF885QLV 697021 ENCODE Processing Pipeline 42dc879ba07ade844e614f635def9031 https://www.encodeproject.org/files/ENCFF926CRV/@@download/ENCFF926CRV.bed.gz GRCh38 released mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF631EJP bigBed narrowPeak optimal idr thresholded peaks ENCSR390VGH ChIP-seq EFO:0002067 K562 cell line Homo sapiens MNT-human ENCAB541WYB DNA False 2017-01-27 ENCODE 1, 2 ENCFF926CRV 1475076 ENCODE Processing Pipeline b603c5f8c934f2d9eb0662763f0784c7 https://www.encodeproject.org/files/ENCFF631EJP/@@download/ENCFF631EJP.bigBed GRCh38 released mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF951ZXP fastq reads ENCSR869IUD ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF2-human ENCAB605GOL DNA False 2016-07-08 ENCODE 1 1 100 paired-ended 2 ENCFF307XRL 1709470450 Michael Snyder, Stanford 6d28663c6ef966310680125fc1a748c6 SRA:SRR6214358 https://www.encodeproject.org/files/ENCFF951ZXP/@@download/ENCFF951ZXP.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFH/ released low read depth, mild to moderate bottlenecking ENCFF043SEF fastq reads ENCSR869IUD ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF2-human ENCAB605GOL DNA False 2016-07-08 ENCODE 2 1 100 paired-ended 1 ENCFF780EID 2358692428 Michael Snyder, Stanford ba60ffae0df9c5481be352e2c27cc6ac SRA:SRR6214359 https://www.encodeproject.org/files/ENCFF043SEF/@@download/ENCFF043SEF.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFD/ released low read depth, mild to moderate bottlenecking ENCFF307XRL fastq reads ENCSR869IUD ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF2-human ENCAB605GOL DNA False 2016-07-08 ENCODE 1 1 100 paired-ended 1 ENCFF951ZXP 1633706269 Michael Snyder, Stanford 7ad40c4c7f3b98e553cdcbe1da407ebe SRA:SRR6214358 https://www.encodeproject.org/files/ENCFF307XRL/@@download/ENCFF307XRL.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFF/ released low read depth, mild to moderate bottlenecking ENCFF780EID fastq reads ENCSR869IUD ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF2-human ENCAB605GOL DNA False 2016-07-08 ENCODE 2 1 100 paired-ended 2 ENCFF043SEF 2342252041 Michael Snyder, Stanford 795d0fddd2575c8e7fc1a88a568ceb6c SRA:SRR6214359 https://www.encodeproject.org/files/ENCFF780EID/@@download/ENCFF780EID.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFA/ released low read depth, mild to moderate bottlenecking ENCFF085AZW bam alignments ENCSR869IUD ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF2-human ENCAB605GOL DNA False 2016-07-08 ENCODE 1 100 ENCFF307XRL, ENCFF807MUK, ENCFF951ZXP 2627627872 ENCODE Processing Pipeline 895dfe0ff5c512cbe5f4e612ce2b2a87 https://www.encodeproject.org/files/ENCFF085AZW/@@download/ENCFF085AZW.bam hg19 released low read depth, mild to moderate bottlenecking ENCFF295OIX bam alignments ENCSR869IUD ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF2-human ENCAB605GOL DNA False 2016-07-08 ENCODE 2 100 ENCFF043SEF, ENCFF780EID, ENCFF807MUK 3837919076 ENCODE Processing Pipeline c8d8309740ffeb65815f1c649ff74fdc https://www.encodeproject.org/files/ENCFF295OIX/@@download/ENCFF295OIX.bam hg19 released low read depth, mild to moderate bottlenecking ENCFF402HVB bigWig signal p-value ENCSR869IUD ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF2-human ENCAB605GOL DNA False 2016-07-08 ENCODE 2 ENCFF051LWI, ENCFF295OIX 1074357387 ENCODE Processing Pipeline f68be3e801770157e26a02e60a2bc215 https://www.encodeproject.org/files/ENCFF402HVB/@@download/ENCFF402HVB.bigWig hg19 released low read depth, mild to moderate bottlenecking ENCFF708ZKW bigWig signal p-value ENCSR869IUD ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF2-human ENCAB605GOL DNA False 2016-07-08 ENCODE 1 ENCFF085AZW, ENCFF581ZJL 980536299 ENCODE Processing Pipeline 97ffd3562f5d169c6892ff784cc2d9f7 https://www.encodeproject.org/files/ENCFF708ZKW/@@download/ENCFF708ZKW.bigWig hg19 released low read depth, mild to moderate bottlenecking ENCFF779GBL bigWig signal p-value ENCSR869IUD ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF2-human ENCAB605GOL DNA False 2016-07-08 ENCODE 1, 2 ENCFF051LWI, ENCFF085AZW, ENCFF295OIX, ENCFF581ZJL 1607905239 ENCODE Processing Pipeline 6c7d6c6eaf9722ee92a0c60bb6aa6ced https://www.encodeproject.org/files/ENCFF779GBL/@@download/ENCFF779GBL.bigWig hg19 released low read depth, mild to moderate bottlenecking ENCFF258YFT bigWig fold change over control ENCSR869IUD ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF2-human ENCAB605GOL DNA False 2016-07-08 ENCODE 1 ENCFF085AZW, ENCFF581ZJL 875163369 ENCODE Processing Pipeline e1c1526f8cf9d0abc98b61268e7b4930 https://www.encodeproject.org/files/ENCFF258YFT/@@download/ENCFF258YFT.bigWig hg19 released low read depth, mild to moderate bottlenecking ENCFF442OVV bigWig fold change over control ENCSR869IUD ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF2-human ENCAB605GOL DNA False 2016-07-08 ENCODE 2 ENCFF051LWI, ENCFF295OIX 972194571 ENCODE Processing Pipeline b9c0cdcad4e5159b185ae8f810fc2d9d https://www.encodeproject.org/files/ENCFF442OVV/@@download/ENCFF442OVV.bigWig hg19 released low read depth, mild to moderate bottlenecking ENCFF454KQY bigWig fold change over control ENCSR869IUD ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF2-human ENCAB605GOL DNA False 2016-07-08 ENCODE 1, 2 ENCFF051LWI, ENCFF085AZW, ENCFF295OIX, ENCFF581ZJL 1801997965 ENCODE Processing Pipeline b943e537f834c305778846f49a147a5d https://www.encodeproject.org/files/ENCFF454KQY/@@download/ENCFF454KQY.bigWig hg19 released low read depth, mild to moderate bottlenecking ENCFF759MWN bed narrowPeak peaks ENCSR869IUD ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF2-human ENCAB605GOL DNA False 2016-07-08 ENCODE 1 ENCFF085AZW, ENCFF581ZJL 6464456 ENCODE Processing Pipeline 3e6b7da4081d167ce8628755eb7f42ae https://www.encodeproject.org/files/ENCFF759MWN/@@download/ENCFF759MWN.bed.gz hg19 released low read depth, mild to moderate bottlenecking ENCFF513RYS bed narrowPeak peaks ENCSR869IUD ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF2-human ENCAB605GOL DNA False 2016-07-08 ENCODE 2 ENCFF051LWI, ENCFF295OIX 6709320 ENCODE Processing Pipeline f9c73cee15733bf6764b14d01bb16516 https://www.encodeproject.org/files/ENCFF513RYS/@@download/ENCFF513RYS.bed.gz hg19 released low read depth, mild to moderate bottlenecking ENCFF826QEY bed narrowPeak peaks ENCSR869IUD ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF2-human ENCAB605GOL DNA False 2016-07-08 ENCODE 1, 2 ENCFF051LWI, ENCFF085AZW, ENCFF295OIX, ENCFF581ZJL 7152191 ENCODE Processing Pipeline 93a0fdf61a4e8b49dfc4e0433fdf04ae https://www.encodeproject.org/files/ENCFF826QEY/@@download/ENCFF826QEY.bed.gz hg19 released low read depth, mild to moderate bottlenecking ENCFF024MYW bigBed narrowPeak peaks ENCSR869IUD ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF2-human ENCAB605GOL DNA False 2016-07-08 ENCODE 1 ENCFF759MWN 13589054 ENCODE Processing Pipeline 2066341dd16abb17728d907ea7ab7b50 https://www.encodeproject.org/files/ENCFF024MYW/@@download/ENCFF024MYW.bigBed hg19 released low read depth, mild to moderate bottlenecking ENCFF787FOY bigBed narrowPeak peaks ENCSR869IUD ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF2-human ENCAB605GOL DNA False 2016-07-08 ENCODE 2 ENCFF513RYS 13925550 ENCODE Processing Pipeline 2dd8444468e0743377f4670e00a8a9e7 https://www.encodeproject.org/files/ENCFF787FOY/@@download/ENCFF787FOY.bigBed hg19 released low read depth, mild to moderate bottlenecking ENCFF114FHE bigBed narrowPeak peaks ENCSR869IUD ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF2-human ENCAB605GOL DNA False 2016-07-08 ENCODE 1, 2 ENCFF826QEY 13944037 ENCODE Processing Pipeline 77c9b62b781fb8486209e9343484dbcc https://www.encodeproject.org/files/ENCFF114FHE/@@download/ENCFF114FHE.bigBed hg19 released low read depth, mild to moderate bottlenecking ENCFF718IGX bam unfiltered alignments ENCSR869IUD ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF2-human ENCAB605GOL DNA False 2016-07-08 ENCODE 2 100 ENCFF043SEF, ENCFF643CGH, ENCFF780EID 4917252641 ENCODE Processing Pipeline d67ae4af4f11cc29f318caf948e6af88 https://www.encodeproject.org/files/ENCFF718IGX/@@download/ENCFF718IGX.bam GRCh38 released low read depth, mild to moderate bottlenecking ENCFF719FYJ bam alignments ENCSR869IUD ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF2-human ENCAB605GOL DNA False 2016-07-08 ENCODE 2 100 ENCFF043SEF, ENCFF643CGH, ENCFF780EID 3840034908 ENCODE Processing Pipeline b6d8eee258aff2aa574291736e2ece0d https://www.encodeproject.org/files/ENCFF719FYJ/@@download/ENCFF719FYJ.bam GRCh38 released low read depth, mild to moderate bottlenecking ENCFF123YZF bam unfiltered alignments ENCSR869IUD ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF2-human ENCAB605GOL DNA False 2016-07-08 ENCODE 1 100 ENCFF307XRL, ENCFF643CGH, ENCFF951ZXP 3651831715 ENCODE Processing Pipeline 85c0af02d8127b4749b15486c3a91a91 https://www.encodeproject.org/files/ENCFF123YZF/@@download/ENCFF123YZF.bam GRCh38 released low read depth, mild to moderate bottlenecking ENCFF883MZR bam alignments ENCSR869IUD ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF2-human ENCAB605GOL DNA False 2016-07-08 ENCODE 1 100 ENCFF307XRL, ENCFF643CGH, ENCFF951ZXP 2628528434 ENCODE Processing Pipeline f605018051189139eed2d8361ed79032 https://www.encodeproject.org/files/ENCFF883MZR/@@download/ENCFF883MZR.bam GRCh38 released low read depth, mild to moderate bottlenecking ENCFF670UKL bigWig signal p-value ENCSR869IUD ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF2-human ENCAB605GOL DNA False 2016-07-08 ENCODE 1 ENCFF883MZR, ENCFF910IKB 881562249 ENCODE Processing Pipeline a5f7a33f8172420807b1de880e2a2d22 https://www.encodeproject.org/files/ENCFF670UKL/@@download/ENCFF670UKL.bigWig GRCh38 released low read depth, mild to moderate bottlenecking ENCFF450LDD bigWig signal p-value ENCSR869IUD ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF2-human ENCAB605GOL DNA False 2016-07-08 ENCODE 2 ENCFF227IZS, ENCFF719FYJ 883705933 ENCODE Processing Pipeline 48e4a1042accd7c5f3a43f0688ce0e7a https://www.encodeproject.org/files/ENCFF450LDD/@@download/ENCFF450LDD.bigWig GRCh38 released low read depth, mild to moderate bottlenecking ENCFF421GGZ bigWig signal p-value ENCSR869IUD ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF2-human ENCAB605GOL DNA False 2016-07-08 ENCODE 1, 2 ENCFF227IZS, ENCFF719FYJ, ENCFF883MZR, ENCFF910IKB 1629523531 ENCODE Processing Pipeline 26c565735ef0672fdd473b45795b4af2 https://www.encodeproject.org/files/ENCFF421GGZ/@@download/ENCFF421GGZ.bigWig GRCh38 released low read depth, mild to moderate bottlenecking ENCFF108ANM bigWig fold change over control ENCSR869IUD ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF2-human ENCAB605GOL DNA False 2016-07-08 ENCODE 2 ENCFF227IZS, ENCFF719FYJ 973653286 ENCODE Processing Pipeline 0a719e68692b203abdf1bd5c815b8d18 https://www.encodeproject.org/files/ENCFF108ANM/@@download/ENCFF108ANM.bigWig GRCh38 released low read depth, mild to moderate bottlenecking ENCFF820RPX bigWig fold change over control ENCSR869IUD ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF2-human ENCAB605GOL DNA False 2016-07-08 ENCODE 1 ENCFF883MZR, ENCFF910IKB 875759613 ENCODE Processing Pipeline 4c32e22ace39007a6d5728e107061fd4 https://www.encodeproject.org/files/ENCFF820RPX/@@download/ENCFF820RPX.bigWig GRCh38 released low read depth, mild to moderate bottlenecking ENCFF749BWV bigWig fold change over control ENCSR869IUD ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF2-human ENCAB605GOL DNA False 2016-07-08 ENCODE 1, 2 ENCFF227IZS, ENCFF719FYJ, ENCFF883MZR, ENCFF910IKB 1803425286 ENCODE Processing Pipeline 642f70a9672eade495bd84ee5cac5444 https://www.encodeproject.org/files/ENCFF749BWV/@@download/ENCFF749BWV.bigWig GRCh38 released low read depth, mild to moderate bottlenecking ENCFF113CTE bigBed narrowPeak peaks ENCSR869IUD ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF2-human ENCAB605GOL DNA False 2016-07-08 ENCODE 2 ENCFF129HSC 11629237 ENCODE Processing Pipeline 7504caf02f0aadf9c4ff621de2fa8afb https://www.encodeproject.org/files/ENCFF113CTE/@@download/ENCFF113CTE.bigBed GRCh38 released low read depth, mild to moderate bottlenecking ENCFF803FHN bed narrowPeak optimal idr thresholded peaks ENCSR869IUD ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF2-human ENCAB605GOL DNA False 2016-07-08 ENCODE 1, 2 ENCFF129HSC, ENCFF419RSJ, ENCFF764SAO, ENCFF784QTQ 809457 ENCODE Processing Pipeline 7add0259e2d935a4afcb4e8316e0e26c https://www.encodeproject.org/files/ENCFF803FHN/@@download/ENCFF803FHN.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking ENCFF129HSC bed narrowPeak peaks ENCSR869IUD ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF2-human ENCAB605GOL DNA False 2016-07-08 ENCODE 2 ENCFF227IZS, ENCFF719FYJ 6594131 ENCODE Processing Pipeline 632ffc386ef26520be2e9ae1d6896a44 https://www.encodeproject.org/files/ENCFF129HSC/@@download/ENCFF129HSC.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking ENCFF514CKE bigBed narrowPeak peaks ENCSR869IUD ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF2-human ENCAB605GOL DNA False 2016-07-08 ENCODE 1 ENCFF764SAO 11382497 ENCODE Processing Pipeline 5bc3d2119bef9b97c7b29e0023163ca2 https://www.encodeproject.org/files/ENCFF514CKE/@@download/ENCFF514CKE.bigBed GRCh38 released low read depth, mild to moderate bottlenecking ENCFF831DRR bigBed narrowPeak conservative idr thresholded peaks ENCSR869IUD ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF2-human ENCAB605GOL DNA False 2016-07-08 ENCODE 1, 2 ENCFF207FUE 1072135 ENCODE Processing Pipeline c0ac864b289e9645932645fb9fd394a7 https://www.encodeproject.org/files/ENCFF831DRR/@@download/ENCFF831DRR.bigBed GRCh38 released low read depth, mild to moderate bottlenecking ENCFF764SAO bed narrowPeak peaks ENCSR869IUD ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF2-human ENCAB605GOL DNA False 2016-07-08 ENCODE 1 ENCFF883MZR, ENCFF910IKB 6314480 ENCODE Processing Pipeline 814ad53ca1c348d9a2eda0056f70a6f5 https://www.encodeproject.org/files/ENCFF764SAO/@@download/ENCFF764SAO.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking ENCFF856ICQ bigBed narrowPeak peaks ENCSR869IUD ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF2-human ENCAB605GOL DNA False 2016-07-08 ENCODE 1, 2 ENCFF784QTQ 13933924 ENCODE Processing Pipeline 09c4d18044cdd39bda1e03ee551bc67a https://www.encodeproject.org/files/ENCFF856ICQ/@@download/ENCFF856ICQ.bigBed GRCh38 released low read depth, mild to moderate bottlenecking ENCFF784QTQ bed narrowPeak peaks ENCSR869IUD ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF2-human ENCAB605GOL DNA False 2016-07-08 ENCODE 1, 2 ENCFF227IZS, ENCFF719FYJ, ENCFF883MZR, ENCFF910IKB 7101045 ENCODE Processing Pipeline 5d97f7d51fd84b5da95f986896fca49c https://www.encodeproject.org/files/ENCFF784QTQ/@@download/ENCFF784QTQ.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking ENCFF207FUE bed narrowPeak conservative idr thresholded peaks ENCSR869IUD ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF2-human ENCAB605GOL DNA False 2016-07-08 ENCODE 1, 2 ENCFF129HSC, ENCFF419RSJ, ENCFF764SAO, ENCFF784QTQ 577300 ENCODE Processing Pipeline 47ea47bf6e2b1fcd449000357112e5d7 https://www.encodeproject.org/files/ENCFF207FUE/@@download/ENCFF207FUE.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking ENCFF911YYM bigBed narrowPeak optimal idr thresholded peaks ENCSR869IUD ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF2-human ENCAB605GOL DNA False 2016-07-08 ENCODE 1, 2 ENCFF803FHN 1378947 ENCODE Processing Pipeline b65acd49b4a522789abcd2707f708e82 https://www.encodeproject.org/files/ENCFF911YYM/@@download/ENCFF911YYM.bigBed GRCh38 released low read depth, mild to moderate bottlenecking ENCFF251HST bam unfiltered alignments ENCSR869IUD ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF2-human ENCAB605GOL DNA False 2016-07-08 ENCODE 1 100 ENCFF307XRL, ENCFF807MUK, ENCFF951ZXP 3647925747 ENCODE Processing Pipeline 2a70169db6fa023b6ffa7e85d3ed0166 https://www.encodeproject.org/files/ENCFF251HST/@@download/ENCFF251HST.bam hg19 released low read depth, mild to moderate bottlenecking ENCFF448GXI bam unfiltered alignments ENCSR869IUD ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF2-human ENCAB605GOL DNA False 2016-07-08 ENCODE 2 100 ENCFF043SEF, ENCFF780EID, ENCFF807MUK 4913911356 ENCODE Processing Pipeline 3539b4426b4e8b1603013bc43aa934ab https://www.encodeproject.org/files/ENCFF448GXI/@@download/ENCFF448GXI.bam hg19 released low read depth, mild to moderate bottlenecking ENCFF413RJJ bigBed narrowPeak conservative idr thresholded peaks ENCSR869IUD ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF2-human ENCAB605GOL DNA False 2016-07-08 ENCODE 1, 2 ENCFF525YRJ 998251 ENCODE Processing Pipeline 1b8692f086c7e94f20060c9ee211570e https://www.encodeproject.org/files/ENCFF413RJJ/@@download/ENCFF413RJJ.bigBed hg19 released low read depth, mild to moderate bottlenecking ENCFF525YRJ bed narrowPeak conservative idr thresholded peaks ENCSR869IUD ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF2-human ENCAB605GOL DNA False 2016-07-08 ENCODE 1, 2 ENCFF001TDO, ENCFF513RYS, ENCFF759MWN, ENCFF826QEY 529867 ENCODE Processing Pipeline 02ebd3ea34b858dd25859bc0abde0ac2 https://www.encodeproject.org/files/ENCFF525YRJ/@@download/ENCFF525YRJ.bed.gz hg19 released low read depth, mild to moderate bottlenecking ENCFF119DRS bigBed narrowPeak optimal idr thresholded peaks ENCSR869IUD ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF2-human ENCAB605GOL DNA False 2016-07-08 ENCODE 1, 2 ENCFF968KBN 1240833 ENCODE Processing Pipeline a7f56d9e630e9afe9f639a953481f471 https://www.encodeproject.org/files/ENCFF119DRS/@@download/ENCFF119DRS.bigBed hg19 released low read depth, mild to moderate bottlenecking ENCFF968KBN bed narrowPeak optimal idr thresholded peaks ENCSR869IUD ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF2-human ENCAB605GOL DNA False 2016-07-08 ENCODE 1, 2 ENCFF001TDO, ENCFF513RYS, ENCFF759MWN, ENCFF826QEY 723708 ENCODE Processing Pipeline 4aad24f6ab0ecc423ff32a4a1989e087 https://www.encodeproject.org/files/ENCFF968KBN/@@download/ENCFF968KBN.bed.gz hg19 released low read depth, mild to moderate bottlenecking ENCFF992PSP fastq reads ENCSR711VWL ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC1-human ENCAB297MIF DNA False 2017-09-28 ENCODE 2 1 100 paired-ended 1 ENCFF814BAR 3306653533 Michael Snyder, Stanford bb1c8294640949bf72aff7b1630ffdba SRA:SRR6213962 https://www.encodeproject.org/files/ENCFF992PSP/@@download/ENCFF992PSP.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFD/ released ENCFF095OUI fastq reads ENCSR711VWL ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC1-human ENCAB297MIF DNA False 2017-09-28 ENCODE 1 1 100 paired-ended 2 ENCFF672NLI 3187189635 Michael Snyder, Stanford 52755d06fffe90cbbe12ffdcf3a2bed5 SRA:SRR6213961 https://www.encodeproject.org/files/ENCFF095OUI/@@download/ENCFF095OUI.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFH/ released ENCFF814BAR fastq reads ENCSR711VWL ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC1-human ENCAB297MIF DNA False 2017-09-28 ENCODE 2 1 100 paired-ended 2 ENCFF992PSP 3356226507 Michael Snyder, Stanford 0eb9cbfdf038f69552c9978438c8e472 SRA:SRR6213962 https://www.encodeproject.org/files/ENCFF814BAR/@@download/ENCFF814BAR.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFA/ released ENCFF672NLI fastq reads ENCSR711VWL ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC1-human ENCAB297MIF DNA False 2017-09-28 ENCODE 1 1 100 paired-ended 1 ENCFF095OUI 3134629919 Michael Snyder, Stanford 5a03af6122131aa7423b48c824259f7f SRA:SRR6213961 https://www.encodeproject.org/files/ENCFF672NLI/@@download/ENCFF672NLI.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFF/ released ENCFF899DGW bam unfiltered alignments ENCSR711VWL ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC1-human ENCAB297MIF DNA False 2017-09-28 ENCODE 2 100 ENCFF643CGH, ENCFF814BAR, ENCFF992PSP 7141411808 ENCODE Processing Pipeline a6250eb767bd7fe08cbe77aa711ad912 https://www.encodeproject.org/files/ENCFF899DGW/@@download/ENCFF899DGW.bam GRCh38 released ENCFF675IBF bam unfiltered alignments ENCSR711VWL ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC1-human ENCAB297MIF DNA False 2017-09-28 ENCODE 1 100 ENCFF095OUI, ENCFF643CGH, ENCFF672NLI 6787267836 ENCODE Processing Pipeline 1323f90b67dc364a11029829a58f7e9c https://www.encodeproject.org/files/ENCFF675IBF/@@download/ENCFF675IBF.bam GRCh38 released ENCFF614EKP bam alignments ENCSR711VWL ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC1-human ENCAB297MIF DNA False 2017-09-28 ENCODE 2 100 ENCFF643CGH, ENCFF814BAR, ENCFF992PSP 5531686265 ENCODE Processing Pipeline 3002972f8e4fddaff63810e3ea1df128 https://www.encodeproject.org/files/ENCFF614EKP/@@download/ENCFF614EKP.bam GRCh38 released ENCFF768MOL bam alignments ENCSR711VWL ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC1-human ENCAB297MIF DNA False 2017-09-28 ENCODE 1 100 ENCFF095OUI, ENCFF643CGH, ENCFF672NLI 5537560044 ENCODE Processing Pipeline 3f46b556b76a84b4db19f3045e8a1f5c https://www.encodeproject.org/files/ENCFF768MOL/@@download/ENCFF768MOL.bam GRCh38 released ENCFF183OFC bigWig signal p-value ENCSR711VWL ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC1-human ENCAB297MIF DNA False 2017-09-28 ENCODE 1 ENCFF768MOL, ENCFF910IKB 1050291844 ENCODE Processing Pipeline 73f36fc0af2ffa497860fd6f3ac4592f https://www.encodeproject.org/files/ENCFF183OFC/@@download/ENCFF183OFC.bigWig GRCh38 released ENCFF696PCA bigWig fold change over control ENCSR711VWL ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC1-human ENCAB297MIF DNA False 2017-09-28 ENCODE 1 ENCFF768MOL, ENCFF910IKB 1296928310 ENCODE Processing Pipeline 96a979d17ae8dce00b4a91fd4908aa90 https://www.encodeproject.org/files/ENCFF696PCA/@@download/ENCFF696PCA.bigWig GRCh38 released ENCFF310FKQ bigWig signal p-value ENCSR711VWL ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC1-human ENCAB297MIF DNA False 2017-09-28 ENCODE 2 ENCFF227IZS, ENCFF614EKP 1069783566 ENCODE Processing Pipeline 15f34fae1b79bf59c9e0d3ae350b7971 https://www.encodeproject.org/files/ENCFF310FKQ/@@download/ENCFF310FKQ.bigWig GRCh38 released ENCFF089UTW bigWig fold change over control ENCSR711VWL ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC1-human ENCAB297MIF DNA False 2017-09-28 ENCODE 1, 2 ENCFF227IZS, ENCFF614EKP, ENCFF768MOL, ENCFF910IKB 2245735537 ENCODE Processing Pipeline 1e4f24b8340d34bd4b8844df5bf7c919 https://www.encodeproject.org/files/ENCFF089UTW/@@download/ENCFF089UTW.bigWig GRCh38 released ENCFF079TPZ bigBed narrowPeak peaks ENCSR711VWL ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC1-human ENCAB297MIF DNA False 2017-09-28 ENCODE 1 ENCFF077VZQ 13005270 ENCODE Processing Pipeline c35ba56ecf77ecf67c72b3c0b9461855 https://www.encodeproject.org/files/ENCFF079TPZ/@@download/ENCFF079TPZ.bigBed GRCh38 released ENCFF695IZG bigBed narrowPeak peaks ENCSR711VWL ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC1-human ENCAB297MIF DNA False 2017-09-28 ENCODE 1, 2 ENCFF039YAY 12978294 ENCODE Processing Pipeline b7ca2e7b663b04fd7b53b759aeeeec15 https://www.encodeproject.org/files/ENCFF695IZG/@@download/ENCFF695IZG.bigBed GRCh38 released ENCFF493LXC bed narrowPeak conservative idr thresholded peaks ENCSR711VWL ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC1-human ENCAB297MIF DNA False 2017-09-28 ENCODE 1, 2 ENCFF039YAY, ENCFF077VZQ, ENCFF419RSJ, ENCFF789AWR 579968 ENCODE Processing Pipeline 27a5cc9933970f37ce8b9a6edad5a6d4 https://www.encodeproject.org/files/ENCFF493LXC/@@download/ENCFF493LXC.bed.gz GRCh38 released ENCFF052SHD bigWig signal p-value ENCSR711VWL ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC1-human ENCAB297MIF DNA False 2017-09-28 ENCODE 1, 2 ENCFF227IZS, ENCFF614EKP, ENCFF768MOL, ENCFF910IKB 1745108014 ENCODE Processing Pipeline d6003d880664b00ab791279d7923271c https://www.encodeproject.org/files/ENCFF052SHD/@@download/ENCFF052SHD.bigWig GRCh38 released ENCFF585RXN bigBed narrowPeak conservative idr thresholded peaks ENCSR711VWL ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC1-human ENCAB297MIF DNA False 2017-09-28 ENCODE 1, 2 ENCFF493LXC 1361205 ENCODE Processing Pipeline 91e1209a6da424f839cc65a69c206790 https://www.encodeproject.org/files/ENCFF585RXN/@@download/ENCFF585RXN.bigBed GRCh38 released ENCFF822UUR bigBed narrowPeak peaks ENCSR711VWL ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC1-human ENCAB297MIF DNA False 2017-09-28 ENCODE 2 ENCFF789AWR 13188282 ENCODE Processing Pipeline b656d511e008407050a3b83903c277b8 https://www.encodeproject.org/files/ENCFF822UUR/@@download/ENCFF822UUR.bigBed GRCh38 released ENCFF789AWR bed narrowPeak peaks ENCSR711VWL ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC1-human ENCAB297MIF DNA False 2017-09-28 ENCODE 2 ENCFF227IZS, ENCFF614EKP 6932173 ENCODE Processing Pipeline a457eb510dc7edb45cbb393eca2c5e24 https://www.encodeproject.org/files/ENCFF789AWR/@@download/ENCFF789AWR.bed.gz GRCh38 released ENCFF039YAY bed narrowPeak peaks ENCSR711VWL ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC1-human ENCAB297MIF DNA False 2017-09-28 ENCODE 1, 2 ENCFF227IZS, ENCFF614EKP, ENCFF768MOL, ENCFF910IKB 7227425 ENCODE Processing Pipeline 12645cd40bf302d84dc882b345934bd9 https://www.encodeproject.org/files/ENCFF039YAY/@@download/ENCFF039YAY.bed.gz GRCh38 released ENCFF758PGF bed narrowPeak optimal idr thresholded peaks ENCSR711VWL ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC1-human ENCAB297MIF DNA False 2017-09-28 ENCODE 1, 2 ENCFF039YAY, ENCFF077VZQ, ENCFF419RSJ, ENCFF789AWR 676849 ENCODE Processing Pipeline 428c2a08a1f7872d2fb43284f30c9543 https://www.encodeproject.org/files/ENCFF758PGF/@@download/ENCFF758PGF.bed.gz GRCh38 released ENCFF500NVW bigWig fold change over control ENCSR711VWL ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC1-human ENCAB297MIF DNA False 2017-09-28 ENCODE 2 ENCFF227IZS, ENCFF614EKP 1292068806 ENCODE Processing Pipeline 2d8740e8751c7763dd12c0981d91ed98 https://www.encodeproject.org/files/ENCFF500NVW/@@download/ENCFF500NVW.bigWig GRCh38 released ENCFF077VZQ bed narrowPeak peaks ENCSR711VWL ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC1-human ENCAB297MIF DNA False 2017-09-28 ENCODE 1 ENCFF768MOL, ENCFF910IKB 7067904 ENCODE Processing Pipeline 9508e89e7922f7e3e707fdd9fe9d6641 https://www.encodeproject.org/files/ENCFF077VZQ/@@download/ENCFF077VZQ.bed.gz GRCh38 released ENCFF101IQA bigBed narrowPeak optimal idr thresholded peaks ENCSR711VWL ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC1-human ENCAB297MIF DNA False 2017-09-28 ENCODE 1, 2 ENCFF758PGF 1538081 ENCODE Processing Pipeline 5cc1b8747333efd22070666c94062b69 https://www.encodeproject.org/files/ENCFF101IQA/@@download/ENCFF101IQA.bigBed GRCh38 released ENCFF184SDI bam unfiltered alignments ENCSR711VWL ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC1-human ENCAB297MIF DNA False 2017-09-28 ENCODE 2 100 ENCFF807MUK, ENCFF814BAR, ENCFF992PSP 7135007861 ENCODE Processing Pipeline b0f095dad733988c18c107e9e8a1d7ee https://www.encodeproject.org/files/ENCFF184SDI/@@download/ENCFF184SDI.bam hg19 released ENCFF267JEC bam unfiltered alignments ENCSR711VWL ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC1-human ENCAB297MIF DNA False 2017-09-28 ENCODE 1 100 ENCFF095OUI, ENCFF672NLI, ENCFF807MUK 6781259300 ENCODE Processing Pipeline f30b89bdbf8ba79e3e8449ce2b7e52e6 https://www.encodeproject.org/files/ENCFF267JEC/@@download/ENCFF267JEC.bam hg19 released ENCFF428MEC bam alignments ENCSR711VWL ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC1-human ENCAB297MIF DNA False 2017-09-28 ENCODE 1 100 ENCFF095OUI, ENCFF672NLI, ENCFF807MUK 5533896354 ENCODE Processing Pipeline 7cedf3ee026464f6cdf2b83698ad420f https://www.encodeproject.org/files/ENCFF428MEC/@@download/ENCFF428MEC.bam hg19 released ENCFF035ZYM bam alignments ENCSR711VWL ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC1-human ENCAB297MIF DNA False 2017-09-28 ENCODE 2 100 ENCFF807MUK, ENCFF814BAR, ENCFF992PSP 5527225299 ENCODE Processing Pipeline 5fa368fbc239627ab34372e4fe7e28c7 https://www.encodeproject.org/files/ENCFF035ZYM/@@download/ENCFF035ZYM.bam hg19 released ENCFF976NFH bigWig signal p-value ENCSR711VWL ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC1-human ENCAB297MIF DNA False 2017-09-28 ENCODE 1 ENCFF428MEC, ENCFF581ZJL 1340372305 ENCODE Processing Pipeline 0a6cdd142b18ccf887092967053e2f2f https://www.encodeproject.org/files/ENCFF976NFH/@@download/ENCFF976NFH.bigWig hg19 released ENCFF563VQM bigWig signal p-value ENCSR711VWL ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC1-human ENCAB297MIF DNA False 2017-09-28 ENCODE 1, 2 ENCFF035ZYM, ENCFF051LWI, ENCFF428MEC, ENCFF581ZJL 2021236594 ENCODE Processing Pipeline 69a39371c22de101303a9d14c5c88103 https://www.encodeproject.org/files/ENCFF563VQM/@@download/ENCFF563VQM.bigWig hg19 released ENCFF614WRB bigWig fold change over control ENCSR711VWL ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC1-human ENCAB297MIF DNA False 2017-09-28 ENCODE 1, 2 ENCFF035ZYM, ENCFF051LWI, ENCFF428MEC, ENCFF581ZJL 2263220950 ENCODE Processing Pipeline 37caf2758632e389745f3771843bd8dc https://www.encodeproject.org/files/ENCFF614WRB/@@download/ENCFF614WRB.bigWig hg19 released ENCFF972TKN bigBed narrowPeak peaks ENCSR711VWL ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC1-human ENCAB297MIF DNA False 2017-09-28 ENCODE 1 ENCFF080VTW 12962875 ENCODE Processing Pipeline 4898170dce95379d53e8e9c99b6dd574 https://www.encodeproject.org/files/ENCFF972TKN/@@download/ENCFF972TKN.bigBed hg19 released ENCFF951GMF bed narrowPeak conservative idr thresholded peaks ENCSR711VWL ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC1-human ENCAB297MIF DNA False 2017-09-28 ENCODE 1, 2 ENCFF001TDO, ENCFF080VTW, ENCFF084IPF, ENCFF149SPA 577579 ENCODE Processing Pipeline f191e28032d96d602e26f9b24bdd167b https://www.encodeproject.org/files/ENCFF951GMF/@@download/ENCFF951GMF.bed.gz hg19 released ENCFF167PFW bigWig signal p-value ENCSR711VWL ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC1-human ENCAB297MIF DNA False 2017-09-28 ENCODE 2 ENCFF035ZYM, ENCFF051LWI 1219330666 ENCODE Processing Pipeline 4b29309bf9b42f0c102d8fd1bbece7c8 https://www.encodeproject.org/files/ENCFF167PFW/@@download/ENCFF167PFW.bigWig hg19 released ENCFF149SPA bed narrowPeak peaks ENCSR711VWL ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC1-human ENCAB297MIF DNA False 2017-09-28 ENCODE 2 ENCFF035ZYM, ENCFF051LWI 6948836 ENCODE Processing Pipeline 1c1779bba1510798d565851ba88f06cf https://www.encodeproject.org/files/ENCFF149SPA/@@download/ENCFF149SPA.bed.gz hg19 released ENCFF869LLT bigBed narrowPeak conservative idr thresholded peaks ENCSR711VWL ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC1-human ENCAB297MIF DNA False 2017-09-28 ENCODE 1, 2 ENCFF951GMF 1353025 ENCODE Processing Pipeline 896d3e057d5489cb3fad0a62fd830d60 https://www.encodeproject.org/files/ENCFF869LLT/@@download/ENCFF869LLT.bigBed hg19 released ENCFF685VEK bigBed narrowPeak optimal idr thresholded peaks ENCSR711VWL ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC1-human ENCAB297MIF DNA False 2017-09-28 ENCODE 1, 2 ENCFF996CUX 1537030 ENCODE Processing Pipeline 7f1facfc5ac8dce7456343576cf4657f https://www.encodeproject.org/files/ENCFF685VEK/@@download/ENCFF685VEK.bigBed hg19 released ENCFF222XGX bigWig fold change over control ENCSR711VWL ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC1-human ENCAB297MIF DNA False 2017-09-28 ENCODE 1 ENCFF428MEC, ENCFF581ZJL 1283099387 ENCODE Processing Pipeline 72f65bdbaa287242f843ee17ae2a610f https://www.encodeproject.org/files/ENCFF222XGX/@@download/ENCFF222XGX.bigWig hg19 released ENCFF341LNG bigWig fold change over control ENCSR711VWL ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC1-human ENCAB297MIF DNA False 2017-09-28 ENCODE 2 ENCFF035ZYM, ENCFF051LWI 1251051901 ENCODE Processing Pipeline 201b5cd3a0f1bb69696d1f18aadd2503 https://www.encodeproject.org/files/ENCFF341LNG/@@download/ENCFF341LNG.bigWig hg19 released ENCFF080VTW bed narrowPeak peaks ENCSR711VWL ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC1-human ENCAB297MIF DNA False 2017-09-28 ENCODE 1 ENCFF428MEC, ENCFF581ZJL 7037676 ENCODE Processing Pipeline 505f5c7a83b186acdf5416a5758462b7 https://www.encodeproject.org/files/ENCFF080VTW/@@download/ENCFF080VTW.bed.gz hg19 released ENCFF084IPF bed narrowPeak peaks ENCSR711VWL ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC1-human ENCAB297MIF DNA False 2017-09-28 ENCODE 1, 2 ENCFF035ZYM, ENCFF051LWI, ENCFF428MEC, ENCFF581ZJL 7220662 ENCODE Processing Pipeline a31b3478993be6c163f55a08be7b82d1 https://www.encodeproject.org/files/ENCFF084IPF/@@download/ENCFF084IPF.bed.gz hg19 released ENCFF840XGX bigBed narrowPeak peaks ENCSR711VWL ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC1-human ENCAB297MIF DNA False 2017-09-28 ENCODE 2 ENCFF149SPA 13191872 ENCODE Processing Pipeline e42c91143203b9e0e98655b9161009cf https://www.encodeproject.org/files/ENCFF840XGX/@@download/ENCFF840XGX.bigBed hg19 released ENCFF997VAF bigBed narrowPeak peaks ENCSR711VWL ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC1-human ENCAB297MIF DNA False 2017-09-28 ENCODE 1, 2 ENCFF084IPF 12962267 ENCODE Processing Pipeline 7708df1d330d6406abf8d1a6417ad586 https://www.encodeproject.org/files/ENCFF997VAF/@@download/ENCFF997VAF.bigBed hg19 released ENCFF996CUX bed narrowPeak optimal idr thresholded peaks ENCSR711VWL ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC1-human ENCAB297MIF DNA False 2017-09-28 ENCODE 1, 2 ENCFF001TDO, ENCFF080VTW, ENCFF084IPF, ENCFF149SPA 680484 ENCODE Processing Pipeline 9bb7168ee1677082803a055cbec21cc4 https://www.encodeproject.org/files/ENCFF996CUX/@@download/ENCFF996CUX.bed.gz hg19 released ENCFF819GKB bam unfiltered alignments ENCSR109YGM ChIP-seq EFO:0002067 K562 cell line Homo sapiens CREB3L1-human ENCAB336DFB DNA False 2014-07-07 ENCODE 2 100 ENCFF002EIQ, ENCFF002EIT, ENCFF807MUK 4458763964 ENCODE Processing Pipeline 5f3f65a554edb32548d13b20b87629a9 https://www.encodeproject.org/files/ENCFF819GKB/@@download/ENCFF819GKB.bam hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF355XUF bam unfiltered alignments ENCSR109YGM ChIP-seq EFO:0002067 K562 cell line Homo sapiens CREB3L1-human ENCAB336DFB DNA False 2014-07-07 ENCODE 1 100 ENCFF002EIN, ENCFF002EIS, ENCFF807MUK 4356972767 ENCODE Processing Pipeline e1515a7b475f10645725c2c78d2b4fb4 https://www.encodeproject.org/files/ENCFF355XUF/@@download/ENCFF355XUF.bam hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF218NQX bigWig signal p-value ENCSR109YGM ChIP-seq EFO:0002067 K562 cell line Homo sapiens CREB3L1-human ENCAB336DFB DNA False 2014-07-07 ENCODE 1, 2 ENCFF051LWI, ENCFF274ZBZ, ENCFF581ZJL, ENCFF950GGY 1797800442 ENCODE Processing Pipeline a785fe3a54558ce47d8dc2f78dd61f97 https://www.encodeproject.org/files/ENCFF218NQX/@@download/ENCFF218NQX.bigWig hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF002EIN fastq reads ENCSR109YGM ChIP-seq EFO:0002067 K562 cell line Homo sapiens CREB3L1-human ENCAB336DFB DNA False 2014-07-07 ENCODE 1 1 100 paired-ended 1 ENCFF002EIS 2046351913 Michael Snyder, Stanford a8dcf129ab2894b6700c2caef459b695 SRA:SRR5111129 https://www.encodeproject.org/files/ENCFF002EIN/@@download/ENCFF002EIN.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFF/ released borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF002EIQ fastq reads ENCSR109YGM ChIP-seq EFO:0002067 K562 cell line Homo sapiens CREB3L1-human ENCAB336DFB DNA False 2014-07-07 ENCODE 2 1 100 paired-ended 2 ENCFF002EIT 2097309009 Michael Snyder, Stanford ce0fe7a0dfd556d276028d177ca3e297 SRA:SRR5111130 https://www.encodeproject.org/files/ENCFF002EIQ/@@download/ENCFF002EIQ.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFA/ released borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF002EIS fastq reads ENCSR109YGM ChIP-seq EFO:0002067 K562 cell line Homo sapiens CREB3L1-human ENCAB336DFB DNA False 2014-07-07 ENCODE 1 1 100 paired-ended 2 ENCFF002EIN 2036096511 Michael Snyder, Stanford 00f452d141011fb991fc54b83af4d748 SRA:SRR5111129 https://www.encodeproject.org/files/ENCFF002EIS/@@download/ENCFF002EIS.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFH/ released borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF002EIT fastq reads ENCSR109YGM ChIP-seq EFO:0002067 K562 cell line Homo sapiens CREB3L1-human ENCAB336DFB DNA False 2014-07-07 ENCODE 2 1 100 paired-ended 1 ENCFF002EIQ 2100370627 Michael Snyder, Stanford 1305ac3312d80b91487f65532d47194a SRA:SRR5111130 https://www.encodeproject.org/files/ENCFF002EIT/@@download/ENCFF002EIT.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFD/ released borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF274RCD bigWig fold change over control ENCSR109YGM ChIP-seq EFO:0002067 K562 cell line Homo sapiens CREB3L1-human ENCAB336DFB DNA False 2014-07-07 ENCODE 1, 2 ENCFF051LWI, ENCFF274ZBZ, ENCFF581ZJL, ENCFF950GGY 1934055432 ENCODE Processing Pipeline 5c40470fa9d62b374273ef8dc07c29ee https://www.encodeproject.org/files/ENCFF274RCD/@@download/ENCFF274RCD.bigWig hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF695WCL bed narrowPeak peaks ENCSR109YGM ChIP-seq EFO:0002067 K562 cell line Homo sapiens CREB3L1-human ENCAB336DFB DNA False 2014-07-07 ENCODE 1 ENCFF581ZJL, ENCFF950GGY 6583780 ENCODE Processing Pipeline e6983af2a0a7532c4c8b4d4d3a1a9080 https://www.encodeproject.org/files/ENCFF695WCL/@@download/ENCFF695WCL.bed.gz hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF914GVW bed narrowPeak peaks ENCSR109YGM ChIP-seq EFO:0002067 K562 cell line Homo sapiens CREB3L1-human ENCAB336DFB DNA False 2014-07-07 ENCODE 2 ENCFF051LWI, ENCFF274ZBZ 6921612 ENCODE Processing Pipeline 8cfeba5ecb646957e24b36fb21b73f6b https://www.encodeproject.org/files/ENCFF914GVW/@@download/ENCFF914GVW.bed.gz hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF896HIP bed narrowPeak peaks ENCSR109YGM ChIP-seq EFO:0002067 K562 cell line Homo sapiens CREB3L1-human ENCAB336DFB DNA False 2014-07-07 ENCODE 1, 2 ENCFF051LWI, ENCFF274ZBZ, ENCFF581ZJL, ENCFF950GGY 7234229 ENCODE Processing Pipeline f08984dadeadf0ca7ec433bf21aa190a https://www.encodeproject.org/files/ENCFF896HIP/@@download/ENCFF896HIP.bed.gz hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF226XKC bigBed narrowPeak peaks ENCSR109YGM ChIP-seq EFO:0002067 K562 cell line Homo sapiens CREB3L1-human ENCAB336DFB DNA False 2014-07-07 ENCODE 1 ENCFF695WCL 13303411 ENCODE Processing Pipeline ec7c285dfbc064e929a86ed071073d7d https://www.encodeproject.org/files/ENCFF226XKC/@@download/ENCFF226XKC.bigBed hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF354BXG bigBed narrowPeak peaks ENCSR109YGM ChIP-seq EFO:0002067 K562 cell line Homo sapiens CREB3L1-human ENCAB336DFB DNA False 2014-07-07 ENCODE 2 ENCFF914GVW 13150218 ENCODE Processing Pipeline f9f4c15ea99834fd42eb951c6f5e6b72 https://www.encodeproject.org/files/ENCFF354BXG/@@download/ENCFF354BXG.bigBed hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF719NIX bed narrowPeak conservative idr thresholded peaks ENCSR109YGM ChIP-seq EFO:0002067 K562 cell line Homo sapiens CREB3L1-human ENCAB336DFB DNA False 2014-07-07 ENCODE 1, 2 ENCFF001TDO, ENCFF695WCL, ENCFF896HIP, ENCFF914GVW 255419 ENCODE Processing Pipeline 4208074ac43189b578f0813cf40c8270 https://www.encodeproject.org/files/ENCFF719NIX/@@download/ENCFF719NIX.bed.gz hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF003DOC bigBed narrowPeak peaks ENCSR109YGM ChIP-seq EFO:0002067 K562 cell line Homo sapiens CREB3L1-human ENCAB336DFB DNA False 2014-07-07 ENCODE 1, 2 ENCFF896HIP 13020255 ENCODE Processing Pipeline 502090ec5823ab3b326740ea6b85a2fd https://www.encodeproject.org/files/ENCFF003DOC/@@download/ENCFF003DOC.bigBed hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF364YBU bigBed narrowPeak conservative idr thresholded peaks ENCSR109YGM ChIP-seq EFO:0002067 K562 cell line Homo sapiens CREB3L1-human ENCAB336DFB DNA False 2014-07-07 ENCODE 1, 2 ENCFF719NIX 555776 ENCODE Processing Pipeline e8a8ec0a63be53ed6aa0db840deee632 https://www.encodeproject.org/files/ENCFF364YBU/@@download/ENCFF364YBU.bigBed hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF582YPB bed narrowPeak optimal idr thresholded peaks ENCSR109YGM ChIP-seq EFO:0002067 K562 cell line Homo sapiens CREB3L1-human ENCAB336DFB DNA False 2014-07-07 ENCODE 1, 2 ENCFF001TDO, ENCFF695WCL, ENCFF896HIP, ENCFF914GVW 407528 ENCODE Processing Pipeline ce5c6d573337c277ed2ac7ed78cb3eed https://www.encodeproject.org/files/ENCFF582YPB/@@download/ENCFF582YPB.bed.gz hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF123PMO bigBed narrowPeak optimal idr thresholded peaks ENCSR109YGM ChIP-seq EFO:0002067 K562 cell line Homo sapiens CREB3L1-human ENCAB336DFB DNA False 2014-07-07 ENCODE 1, 2 ENCFF582YPB 950079 ENCODE Processing Pipeline 17b451b7a9a10d6a6602b5f2558783b6 https://www.encodeproject.org/files/ENCFF123PMO/@@download/ENCFF123PMO.bigBed hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF950GGY bam alignments ENCSR109YGM ChIP-seq EFO:0002067 K562 cell line Homo sapiens CREB3L1-human ENCAB336DFB DNA False 2014-07-07 ENCODE 1 100 ENCFF002EIN, ENCFF002EIS, ENCFF807MUK 3133213178 ENCODE Processing Pipeline 5789ae9c77f65bc6dd1e3510d0abc3cc https://www.encodeproject.org/files/ENCFF950GGY/@@download/ENCFF950GGY.bam hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF274ZBZ bam alignments ENCSR109YGM ChIP-seq EFO:0002067 K562 cell line Homo sapiens CREB3L1-human ENCAB336DFB DNA False 2014-07-07 ENCODE 2 100 ENCFF002EIQ, ENCFF002EIT, ENCFF807MUK 3285979011 ENCODE Processing Pipeline 03f485c4b71346a05e59663038e1b86b https://www.encodeproject.org/files/ENCFF274ZBZ/@@download/ENCFF274ZBZ.bam hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF404YGN bigWig signal p-value ENCSR109YGM ChIP-seq EFO:0002067 K562 cell line Homo sapiens CREB3L1-human ENCAB336DFB DNA False 2014-07-07 ENCODE 1 ENCFF581ZJL, ENCFF950GGY 1087271404 ENCODE Processing Pipeline 20d3d07480106b2fe4a4f959e38b05e4 https://www.encodeproject.org/files/ENCFF404YGN/@@download/ENCFF404YGN.bigWig hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF783JLW bigWig signal p-value ENCSR109YGM ChIP-seq EFO:0002067 K562 cell line Homo sapiens CREB3L1-human ENCAB336DFB DNA False 2014-07-07 ENCODE 2 ENCFF051LWI, ENCFF274ZBZ 1042318362 ENCODE Processing Pipeline baa32bdf310cc188669f3b1e2a5d6121 https://www.encodeproject.org/files/ENCFF783JLW/@@download/ENCFF783JLW.bigWig hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF885SSN bigWig signal p-value ENCSR109YGM ChIP-seq EFO:0002067 K562 cell line Homo sapiens CREB3L1-human ENCAB336DFB DNA False 2014-07-07 ENCODE 1, 2 ENCFF051LWI, ENCFF274ZBZ, ENCFF581ZJL, ENCFF950GGY 1803859005 ENCODE Processing Pipeline 21f6600407cfd626187aa0e07151554f https://www.encodeproject.org/files/ENCFF885SSN/@@download/ENCFF885SSN.bigWig hg19 archived borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF931UPV bigWig fold change over control ENCSR109YGM ChIP-seq EFO:0002067 K562 cell line Homo sapiens CREB3L1-human ENCAB336DFB DNA False 2014-07-07 ENCODE 1 ENCFF581ZJL, ENCFF950GGY 1060468885 ENCODE Processing Pipeline f9250dfdad240517d4c0aedbb7f36f2e https://www.encodeproject.org/files/ENCFF931UPV/@@download/ENCFF931UPV.bigWig hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF816AZE bigWig fold change over control ENCSR109YGM ChIP-seq EFO:0002067 K562 cell line Homo sapiens CREB3L1-human ENCAB336DFB DNA False 2014-07-07 ENCODE 2 ENCFF051LWI, ENCFF274ZBZ 1036167150 ENCODE Processing Pipeline 2b905c0c90424b43d637a957da32b78d https://www.encodeproject.org/files/ENCFF816AZE/@@download/ENCFF816AZE.bigWig hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF719MEC bed narrowPeak peaks ENCSR109YGM ChIP-seq EFO:0002067 K562 cell line Homo sapiens CREB3L1-human ENCAB336DFB DNA False 2014-07-07 ENCODE 1, 2 ENCFF051LWI, ENCFF274ZBZ, ENCFF581ZJL, ENCFF950GGY 7249645 ENCODE Processing Pipeline 68858fd2b2be45acbdab1c2ea2759df5 https://www.encodeproject.org/files/ENCFF719MEC/@@download/ENCFF719MEC.bed.gz hg19 archived borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF010MNE bigWig fold change over control ENCSR109YGM ChIP-seq EFO:0002067 K562 cell line Homo sapiens CREB3L1-human ENCAB336DFB DNA False 2014-07-07 ENCODE 1, 2 ENCFF051LWI, ENCFF274ZBZ, ENCFF581ZJL, ENCFF950GGY 1941498487 ENCODE Processing Pipeline 0ea8faefcfa89dac7ba6c6297ece4eac https://www.encodeproject.org/files/ENCFF010MNE/@@download/ENCFF010MNE.bigWig hg19 archived borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF596CWP bed narrowPeak peaks ENCSR109YGM ChIP-seq EFO:0002067 K562 cell line Homo sapiens CREB3L1-human ENCAB336DFB DNA False 2014-07-07 ENCODE 1 ENCFF581ZJL, ENCFF950GGY 6695065 ENCODE Processing Pipeline ef13e3b8be36e873b31da94086526824 https://www.encodeproject.org/files/ENCFF596CWP/@@download/ENCFF596CWP.bed.gz hg19 archived borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF103LHL bigBed narrowPeak peaks ENCSR109YGM ChIP-seq EFO:0002067 K562 cell line Homo sapiens CREB3L1-human ENCAB336DFB DNA False 2014-07-07 ENCODE 2 ENCFF893FDT 13151179 ENCODE Processing Pipeline eb347bd731c02e2b3ca0e8bb3532afe4 https://www.encodeproject.org/files/ENCFF103LHL/@@download/ENCFF103LHL.bigBed hg19 archived borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF893FDT bed narrowPeak peaks ENCSR109YGM ChIP-seq EFO:0002067 K562 cell line Homo sapiens CREB3L1-human ENCAB336DFB DNA False 2014-07-07 ENCODE 2 ENCFF051LWI, ENCFF274ZBZ 6996985 ENCODE Processing Pipeline 923708270fe325cf05efb068175c9b1f https://www.encodeproject.org/files/ENCFF893FDT/@@download/ENCFF893FDT.bed.gz hg19 archived borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF255XIP bigBed narrowPeak peaks ENCSR109YGM ChIP-seq EFO:0002067 K562 cell line Homo sapiens CREB3L1-human ENCAB336DFB DNA False 2014-07-07 ENCODE 1, 2 ENCFF719MEC 13018742 ENCODE Processing Pipeline 1f8dca8b8477639c2afc8e2a887d9131 https://www.encodeproject.org/files/ENCFF255XIP/@@download/ENCFF255XIP.bigBed hg19 archived borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF379RAN bigBed narrowPeak peaks ENCSR109YGM ChIP-seq EFO:0002067 K562 cell line Homo sapiens CREB3L1-human ENCAB336DFB DNA False 2014-07-07 ENCODE 1 ENCFF596CWP 13308452 ENCODE Processing Pipeline f98dcd94f9cd57c43ea1df29fe60e0bd https://www.encodeproject.org/files/ENCFF379RAN/@@download/ENCFF379RAN.bigBed hg19 archived borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF926PJS bam unfiltered alignments ENCSR109YGM ChIP-seq EFO:0002067 K562 cell line Homo sapiens CREB3L1-human ENCAB336DFB DNA False 2014-07-07 ENCODE 2 100 ENCFF002EIQ, ENCFF002EIT, ENCFF643CGH 4462110060 ENCODE Processing Pipeline 028e53be96544483181701dd4e44d9a7 https://www.encodeproject.org/files/ENCFF926PJS/@@download/ENCFF926PJS.bam GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF358SSM bam alignments ENCSR109YGM ChIP-seq EFO:0002067 K562 cell line Homo sapiens CREB3L1-human ENCAB336DFB DNA False 2014-07-07 ENCODE 2 100 ENCFF002EIQ, ENCFF002EIT, ENCFF643CGH 3287600249 ENCODE Processing Pipeline 0470c97946bea35dbbbfd42b68f36c14 https://www.encodeproject.org/files/ENCFF358SSM/@@download/ENCFF358SSM.bam GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF465XCK bam unfiltered alignments ENCSR109YGM ChIP-seq EFO:0002067 K562 cell line Homo sapiens CREB3L1-human ENCAB336DFB DNA False 2014-07-07 ENCODE 1 100 ENCFF002EIN, ENCFF002EIS, ENCFF643CGH 4360466890 ENCODE Processing Pipeline ec2c25b7385894d74f8253acc9489eca https://www.encodeproject.org/files/ENCFF465XCK/@@download/ENCFF465XCK.bam GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF405YCF bam alignments ENCSR109YGM ChIP-seq EFO:0002067 K562 cell line Homo sapiens CREB3L1-human ENCAB336DFB DNA False 2014-07-07 ENCODE 1 100 ENCFF002EIN, ENCFF002EIS, ENCFF643CGH 3135017651 ENCODE Processing Pipeline 52da047f4e217c9718fcec9a4439a2a3 https://www.encodeproject.org/files/ENCFF405YCF/@@download/ENCFF405YCF.bam GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF929PXN bigWig signal p-value ENCSR109YGM ChIP-seq EFO:0002067 K562 cell line Homo sapiens CREB3L1-human ENCAB336DFB DNA False 2014-07-07 ENCODE 1 ENCFF405YCF 998115846 ENCODE Processing Pipeline 901dfa81bfc5e0ac44227144cb3151b8 https://www.encodeproject.org/files/ENCFF929PXN/@@download/ENCFF929PXN.bigWig GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF539HIH bigWig signal p-value ENCSR109YGM ChIP-seq EFO:0002067 K562 cell line Homo sapiens CREB3L1-human ENCAB336DFB DNA False 2014-07-07 ENCODE 2 ENCFF358SSM 1028403712 ENCODE Processing Pipeline 3c1bfd83ddce9010eeecc2f7878548db https://www.encodeproject.org/files/ENCFF539HIH/@@download/ENCFF539HIH.bigWig GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF425YFW bigWig signal p-value ENCSR109YGM ChIP-seq EFO:0002067 K562 cell line Homo sapiens CREB3L1-human ENCAB336DFB DNA False 2014-07-07 ENCODE 1, 2 ENCFF358SSM, ENCFF405YCF 1672832762 ENCODE Processing Pipeline a58ded6a0c79091f9e620c53babf5a30 https://www.encodeproject.org/files/ENCFF425YFW/@@download/ENCFF425YFW.bigWig GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF736NLT bigWig fold change over control ENCSR109YGM ChIP-seq EFO:0002067 K562 cell line Homo sapiens CREB3L1-human ENCAB336DFB DNA False 2014-07-07 ENCODE 1 ENCFF405YCF 1061633812 ENCODE Processing Pipeline 615c02c448eaf003abfc18b56d194938 https://www.encodeproject.org/files/ENCFF736NLT/@@download/ENCFF736NLT.bigWig GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF465AKJ bigWig fold change over control ENCSR109YGM ChIP-seq EFO:0002067 K562 cell line Homo sapiens CREB3L1-human ENCAB336DFB DNA False 2014-07-07 ENCODE 2 ENCFF358SSM 1037643626 ENCODE Processing Pipeline d15bf4c9aee3e049ee19a015dd6bf547 https://www.encodeproject.org/files/ENCFF465AKJ/@@download/ENCFF465AKJ.bigWig GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF562ERQ bed narrowPeak conservative idr thresholded peaks ENCSR109YGM ChIP-seq EFO:0002067 K562 cell line Homo sapiens CREB3L1-human ENCAB336DFB DNA False 2014-07-07 ENCODE 1, 2 ENCFF419RSJ, ENCFF493XGB, ENCFF853PDJ, ENCFF874WMJ 257860 ENCODE Processing Pipeline 1819aaf3bf659ffcfa220d60672385e9 https://www.encodeproject.org/files/ENCFF562ERQ/@@download/ENCFF562ERQ.bed.gz GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF289ORB bigBed narrowPeak optimal idr thresholded peaks ENCSR109YGM ChIP-seq EFO:0002067 K562 cell line Homo sapiens CREB3L1-human ENCAB336DFB DNA False 2014-07-07 ENCODE 1, 2 ENCFF566HGU 958228 ENCODE Processing Pipeline 6307b3af0677664ab6465234d5a6db7f https://www.encodeproject.org/files/ENCFF289ORB/@@download/ENCFF289ORB.bigBed GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF674MNP bigBed narrowPeak peaks ENCSR109YGM ChIP-seq EFO:0002067 K562 cell line Homo sapiens CREB3L1-human ENCAB336DFB DNA False 2014-07-07 ENCODE 1 ENCFF853PDJ 13323977 ENCODE Processing Pipeline 88ea3762ff83c5c04e6721cdb65fe796 https://www.encodeproject.org/files/ENCFF674MNP/@@download/ENCFF674MNP.bigBed GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF853PDJ bed narrowPeak peaks ENCSR109YGM ChIP-seq EFO:0002067 K562 cell line Homo sapiens CREB3L1-human ENCAB336DFB DNA False 2014-07-07 ENCODE 1 ENCFF405YCF 6590433 ENCODE Processing Pipeline 1068151e1afa24764c290fdb7f791b11 https://www.encodeproject.org/files/ENCFF853PDJ/@@download/ENCFF853PDJ.bed.gz GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF874WMJ bed narrowPeak peaks ENCSR109YGM ChIP-seq EFO:0002067 K562 cell line Homo sapiens CREB3L1-human ENCAB336DFB DNA False 2014-07-07 ENCODE 2 ENCFF358SSM 6867148 ENCODE Processing Pipeline 98372b3bd268a11c54fd4aeefaf312e7 https://www.encodeproject.org/files/ENCFF874WMJ/@@download/ENCFF874WMJ.bed.gz GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF493XGB bed narrowPeak peaks ENCSR109YGM ChIP-seq EFO:0002067 K562 cell line Homo sapiens CREB3L1-human ENCAB336DFB DNA False 2014-07-07 ENCODE 1, 2 ENCFF358SSM, ENCFF405YCF 7243087 ENCODE Processing Pipeline e0d0b90c894cc3e8094717102e077822 https://www.encodeproject.org/files/ENCFF493XGB/@@download/ENCFF493XGB.bed.gz GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF347RWX bigWig fold change over control ENCSR109YGM ChIP-seq EFO:0002067 K562 cell line Homo sapiens CREB3L1-human ENCAB336DFB DNA False 2014-07-07 ENCODE 1, 2 ENCFF358SSM, ENCFF405YCF 1933884851 ENCODE Processing Pipeline 51a0eba2751d854f9fd640f222399f65 https://www.encodeproject.org/files/ENCFF347RWX/@@download/ENCFF347RWX.bigWig GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF558YCI bigBed narrowPeak peaks ENCSR109YGM ChIP-seq EFO:0002067 K562 cell line Homo sapiens CREB3L1-human ENCAB336DFB DNA False 2014-07-07 ENCODE 2 ENCFF874WMJ 13104773 ENCODE Processing Pipeline 2ad3cd84d5c7901ebf09c33d06730682 https://www.encodeproject.org/files/ENCFF558YCI/@@download/ENCFF558YCI.bigBed GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF566HGU bed narrowPeak optimal idr thresholded peaks ENCSR109YGM ChIP-seq EFO:0002067 K562 cell line Homo sapiens CREB3L1-human ENCAB336DFB DNA False 2014-07-07 ENCODE 1, 2 ENCFF419RSJ, ENCFF493XGB, ENCFF853PDJ, ENCFF874WMJ 409522 ENCODE Processing Pipeline 8ac2d34f8435e5c7c7cb81889c5f2479 https://www.encodeproject.org/files/ENCFF566HGU/@@download/ENCFF566HGU.bed.gz GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF844YAH bigBed narrowPeak peaks ENCSR109YGM ChIP-seq EFO:0002067 K562 cell line Homo sapiens CREB3L1-human ENCAB336DFB DNA False 2014-07-07 ENCODE 1, 2 ENCFF493XGB 13038101 ENCODE Processing Pipeline 5939132d2640701f931fbaf16d58d71c https://www.encodeproject.org/files/ENCFF844YAH/@@download/ENCFF844YAH.bigBed GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF708QJH bigBed narrowPeak conservative idr thresholded peaks ENCSR109YGM ChIP-seq EFO:0002067 K562 cell line Homo sapiens CREB3L1-human ENCAB336DFB DNA False 2014-07-07 ENCODE 1, 2 ENCFF562ERQ 562613 ENCODE Processing Pipeline 0bdc10b487839b308028359e70526306 https://www.encodeproject.org/files/ENCFF708QJH/@@download/ENCFF708QJH.bigBed GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF540XNJ bigBed narrowPeak conservative idr thresholded peaks ENCSR109YGM ChIP-seq EFO:0002067 K562 cell line Homo sapiens CREB3L1-human ENCAB336DFB DNA False 2014-07-07 ENCODE 1, 2 ENCFF313FMB 403067 ENCODE Processing Pipeline 2c8f2161178274ba0a208b371aef9937 https://www.encodeproject.org/files/ENCFF540XNJ/@@download/ENCFF540XNJ.bigBed hg19 archived borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF708GFU bed narrowPeak optimal idr thresholded peaks ENCSR109YGM ChIP-seq EFO:0002067 K562 cell line Homo sapiens CREB3L1-human ENCAB336DFB DNA False 2014-07-07 ENCODE 1, 2 ENCFF001TDO, ENCFF596CWP, ENCFF719MEC, ENCFF893FDT 344465 ENCODE Processing Pipeline a0e276147e2f327c48369ebaaa3944d4 https://www.encodeproject.org/files/ENCFF708GFU/@@download/ENCFF708GFU.bed.gz hg19 archived borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF683UMP bigBed narrowPeak optimal idr thresholded peaks ENCSR109YGM ChIP-seq EFO:0002067 K562 cell line Homo sapiens CREB3L1-human ENCAB336DFB DNA False 2014-07-07 ENCODE 1, 2 ENCFF708GFU 701087 ENCODE Processing Pipeline 4dccb2b2a9c3b83184db0d86a65be8a9 https://www.encodeproject.org/files/ENCFF683UMP/@@download/ENCFF683UMP.bigBed hg19 archived borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF313FMB bed narrowPeak conservative idr thresholded peaks ENCSR109YGM ChIP-seq EFO:0002067 K562 cell line Homo sapiens CREB3L1-human ENCAB336DFB DNA False 2014-07-07 ENCODE 1, 2 ENCFF001TDO, ENCFF596CWP, ENCFF719MEC, ENCFF893FDT 213384 ENCODE Processing Pipeline 61759af3e1d69abfdeac2cfa492f2e80 https://www.encodeproject.org/files/ENCFF313FMB/@@download/ENCFF313FMB.bed.gz hg19 archived borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF000YQX bam alignments ENCSR000EGU ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute IRF1-human ENCAB000AHX DNA see document see document False 2011-10-29 ENCODE 1 ENCFF000YRO 333305358 Michael Snyder, Stanford d8edc1f150b626f3ad5f2d74c2b45fe5 https://www.encodeproject.org/files/ENCFF000YQX/@@download/ENCFF000YQX.bam hg19 archived mixed read lengths, control low read depth, borderline replicate concordance, low read depth, low read length biological replicates with identical biosample insufficient read length, insufficient read depth missing control alignments ENCFF000YQY bam alignments ENCSR000EGU ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute IRF1-human ENCAB000AHX DNA see document see document False 2011-10-29 ENCODE 2 ENCFF000YSL 221706690 Michael Snyder, Stanford 772b800ca5dc1e05e7a1cb6d41f1be15 https://www.encodeproject.org/files/ENCFF000YQY/@@download/ENCFF000YQY.bam hg19 archived mixed read lengths, control low read depth, borderline replicate concordance, low read depth, low read length biological replicates with identical biosample insufficient read length, insufficient read depth missing control alignments ENCFF000YQZ bigBed narrowPeak peaks ENCSR000EGU ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute IRF1-human ENCAB000AHX DNA see document see document False 2011-10-29 ENCODE ENCFF001VNK 237033 Michael Snyder, Stanford bb17d475c1565fc9b858d9f80c140f80 https://www.encodeproject.org/files/ENCFF000YQZ/@@download/ENCFF000YQZ.bigBed hg19 archived mixed read lengths, control low read depth, borderline replicate concordance, low read depth, low read length biological replicates with identical biosample insufficient read length, insufficient read depth missing control alignments ENCFF000YRD bigWig signal ENCSR000EGU ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute IRF1-human ENCAB000AHX DNA see document see document False 2011-10-29 ENCODE 352223461 Michael Snyder, Stanford 7be76d95b3ed0a30512fa8731342e7d6 https://www.encodeproject.org/files/ENCFF000YRD/@@download/ENCFF000YRD.bigWig hg19 archived mixed read lengths, control low read depth, borderline replicate concordance, low read depth, low read length biological replicates with identical biosample, missing derived_from insufficient read length, insufficient read depth missing control alignments ENCFF000YRO fastq reads ENCSR000EGU ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute IRF1-human ENCAB000AHX DNA see document see document False 2011-10-29 ENCODE 1 1 36 single-ended 981691497 Michael Snyder, Stanford 2e94c2ee92e62e4b5f727cc88c7fe548 https://www.encodeproject.org/files/ENCFF000YRO/@@download/ENCFF000YRO.fastq.gz Illumina Genome Analyzer /files/ENCFF000YOV/ released control low read depth, borderline replicate concordance, low read depth, mixed read lengths, inconsistent control read length, low read length biological replicates with identical biosample insufficient read length, insufficient read depth missing control alignments ENCFF000YSL fastq reads ENCSR000EGU ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute IRF1-human ENCAB000AHX DNA see document see document False 2011-10-29 ENCODE 2 1 27 single-ended 330375331 Michael Snyder, Stanford 92016110670166f12aa1a86f5afa0a8a https://www.encodeproject.org/files/ENCFF000YSL/@@download/ENCFF000YSL.fastq.gz Illumina Genome Analyzer /files/ENCFF000YOV/ released mixed read lengths, control low read depth, borderline replicate concordance, low read depth, low read length biological replicates with identical biosample insufficient read length, insufficient read depth missing control alignments ENCFF001VNK bed narrowPeak peaks ENCSR000EGU ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute IRF1-human ENCAB000AHX DNA see document see document False 2011-10-29 ENCODE 62876 Michael Snyder, Stanford 61e18337bdb14560478c340a0c5ff88f https://www.encodeproject.org/files/ENCFF001VNK/@@download/ENCFF001VNK.bed.gz hg19 archived mixed read lengths, control low read depth, borderline replicate concordance, low read depth, low read length biological replicates with identical biosample, missing derived_from insufficient read length, insufficient read depth missing control alignments ENCFF002CWV bed narrowPeak optimal idr thresholded peaks ENCSR000EGU ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute IRF1-human ENCAB000AHX DNA see document see document False 2011-10-29 ENCODE 35503 ENCODE Consortium Analysis Working Group fde2ede3ff6eb70e03a7d29c4f98aa0f https://www.encodeproject.org/files/ENCFF002CWV/@@download/ENCFF002CWV.bed.gz hg19 archived mixed read lengths, control low read depth, borderline replicate concordance, low read depth, low read length biological replicates with identical biosample, missing derived_from insufficient read length, insufficient read depth missing control alignments ENCFF196TNH bigBed narrowPeak optimal idr thresholded peaks ENCSR000EGU ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute IRF1-human ENCAB000AHX DNA see document see document False 2011-10-29 ENCODE ENCFF002CWV 180209 ENCODE Consortium 9d2ba56f119b9fd580ebc7e7ed4d3977 https://www.encodeproject.org/files/ENCFF196TNH/@@download/ENCFF196TNH.bigBed hg19 archived mixed read lengths, control low read depth, borderline replicate concordance, low read depth, low read length biological replicates with identical biosample insufficient read length, insufficient read depth missing control alignments ENCFF114FXV bigWig fold change over control ENCSR000EGU ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute IRF1-human ENCAB000AHX DNA see document see document False 2011-10-29 ENCODE 1 ENCFF650MOB, ENCFF703RUQ 238330953 ENCODE Processing Pipeline 83da6cb6dba6595ca8c3c19bc628ed74 https://www.encodeproject.org/files/ENCFF114FXV/@@download/ENCFF114FXV.bigWig hg19 released mixed read lengths, control low read depth, borderline replicate concordance, low read depth, low read length biological replicates with identical biosample insufficient read length, insufficient read depth missing control alignments ENCFF445PFM bigWig fold change over control ENCSR000EGU ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute IRF1-human ENCAB000AHX DNA see document see document False 2011-10-29 ENCODE 2 ENCFF650MOB, ENCFF987HMV 111988386 ENCODE Processing Pipeline 63d447261bc11ca09606c17263bde3ee https://www.encodeproject.org/files/ENCFF445PFM/@@download/ENCFF445PFM.bigWig hg19 released mixed read lengths, control low read depth, borderline replicate concordance, low read depth, low read length biological replicates with identical biosample insufficient read length, insufficient read depth missing control alignments ENCFF468TKO bigWig fold change over control ENCSR000EGU ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute IRF1-human ENCAB000AHX DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF650MOB, ENCFF703RUQ, ENCFF987HMV 319024181 ENCODE Processing Pipeline 58d5fa8b6a63ea7c04b9f688225ffca5 https://www.encodeproject.org/files/ENCFF468TKO/@@download/ENCFF468TKO.bigWig hg19 released mixed read lengths, control low read depth, borderline replicate concordance, low read depth, low read length biological replicates with identical biosample insufficient read length, insufficient read depth missing control alignments ENCFF287QAX bigBed narrowPeak peaks ENCSR000EGU ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute IRF1-human ENCAB000AHX DNA see document see document False 2011-10-29 ENCODE 2 ENCFF219ASD 2505235 ENCODE Processing Pipeline 405bf835935edaf768c84c70aa9d85dd https://www.encodeproject.org/files/ENCFF287QAX/@@download/ENCFF287QAX.bigBed hg19 released mixed read lengths, control low read depth, borderline replicate concordance, low read depth, low read length biological replicates with identical biosample insufficient read length, insufficient read depth missing control alignments ENCFF256GYM bed narrowPeak conservative idr thresholded peaks ENCSR000EGU ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute IRF1-human ENCAB000AHX DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF001TDO, ENCFF219ASD, ENCFF467GRI, ENCFF879FJY 17204 ENCODE Processing Pipeline 819dd02b5e1b17baf83f4d5b80316bc8 https://www.encodeproject.org/files/ENCFF256GYM/@@download/ENCFF256GYM.bed.gz hg19 released mixed read lengths, control low read depth, borderline replicate concordance, low read depth, low read length biological replicates with identical biosample insufficient read length, insufficient read depth missing control alignments ENCFF701ZUY bigWig signal p-value ENCSR000EGU ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute IRF1-human ENCAB000AHX DNA see document see document False 2011-10-29 ENCODE 1 ENCFF650MOB, ENCFF703RUQ 313989885 ENCODE Processing Pipeline d30c623e9f23e8e8fe8a106dd929ce5d https://www.encodeproject.org/files/ENCFF701ZUY/@@download/ENCFF701ZUY.bigWig hg19 released mixed read lengths, control low read depth, borderline replicate concordance, low read depth, low read length biological replicates with identical biosample insufficient read length, insufficient read depth missing control alignments ENCFF701XOE bigWig signal p-value ENCSR000EGU ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute IRF1-human ENCAB000AHX DNA see document see document False 2011-10-29 ENCODE 2 ENCFF650MOB, ENCFF987HMV 226719141 ENCODE Processing Pipeline 5a8900fdde0fc8a1cf74e736faa7474c https://www.encodeproject.org/files/ENCFF701XOE/@@download/ENCFF701XOE.bigWig hg19 released mixed read lengths, control low read depth, borderline replicate concordance, low read depth, low read length biological replicates with identical biosample insufficient read length, insufficient read depth missing control alignments ENCFF467GRI bed narrowPeak peaks ENCSR000EGU ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute IRF1-human ENCAB000AHX DNA see document see document False 2011-10-29 ENCODE 1 ENCFF650MOB, ENCFF703RUQ 3615122 ENCODE Processing Pipeline dc0cfa0a67c7c5b32f08bf16d2422fc9 https://www.encodeproject.org/files/ENCFF467GRI/@@download/ENCFF467GRI.bed.gz hg19 released mixed read lengths, control low read depth, borderline replicate concordance, low read depth, low read length biological replicates with identical biosample insufficient read length, insufficient read depth missing control alignments ENCFF414XRS bigBed narrowPeak optimal idr thresholded peaks ENCSR000EGU ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute IRF1-human ENCAB000AHX DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF730RUF 87424 ENCODE Processing Pipeline f1eceb1b4b28ffe726d8c97aeeeaea09 https://www.encodeproject.org/files/ENCFF414XRS/@@download/ENCFF414XRS.bigBed hg19 released mixed read lengths, control low read depth, borderline replicate concordance, low read depth, low read length biological replicates with identical biosample insufficient read length, insufficient read depth missing control alignments ENCFF894CFG bigWig signal p-value ENCSR000EGU ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute IRF1-human ENCAB000AHX DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF650MOB, ENCFF703RUQ, ENCFF987HMV 318545964 ENCODE Processing Pipeline decb6e08d23fb196c0454043be9059c3 https://www.encodeproject.org/files/ENCFF894CFG/@@download/ENCFF894CFG.bigWig hg19 released mixed read lengths, control low read depth, borderline replicate concordance, low read depth, low read length biological replicates with identical biosample insufficient read length, insufficient read depth missing control alignments ENCFF752QCM bigBed narrowPeak peaks ENCSR000EGU ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute IRF1-human ENCAB000AHX DNA see document see document False 2011-10-29 ENCODE 1 ENCFF467GRI 7549021 ENCODE Processing Pipeline dcc056c6725c30819aa05a63541f5eb9 https://www.encodeproject.org/files/ENCFF752QCM/@@download/ENCFF752QCM.bigBed hg19 released mixed read lengths, control low read depth, borderline replicate concordance, low read depth, low read length biological replicates with identical biosample insufficient read length, insufficient read depth missing control alignments ENCFF198QMT bigBed narrowPeak peaks ENCSR000EGU ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute IRF1-human ENCAB000AHX DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF879FJY 10124335 ENCODE Processing Pipeline e25eb6b04409e1dc4a7265585dde3ef5 https://www.encodeproject.org/files/ENCFF198QMT/@@download/ENCFF198QMT.bigBed hg19 released mixed read lengths, control low read depth, borderline replicate concordance, low read depth, low read length biological replicates with identical biosample insufficient read length, insufficient read depth missing control alignments ENCFF396XRA bigBed narrowPeak conservative idr thresholded peaks ENCSR000EGU ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute IRF1-human ENCAB000AHX DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF256GYM 72213 ENCODE Processing Pipeline 7c110aab7ac9c5121afd22420a5637f1 https://www.encodeproject.org/files/ENCFF396XRA/@@download/ENCFF396XRA.bigBed hg19 released mixed read lengths, control low read depth, borderline replicate concordance, low read depth, low read length biological replicates with identical biosample insufficient read length, insufficient read depth missing control alignments ENCFF730RUF bed narrowPeak optimal idr thresholded peaks ENCSR000EGU ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute IRF1-human ENCAB000AHX DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF001TDO, ENCFF219ASD, ENCFF467GRI, ENCFF879FJY 28306 ENCODE Processing Pipeline a6f5b7194e601a38cffb1e0c847da96c https://www.encodeproject.org/files/ENCFF730RUF/@@download/ENCFF730RUF.bed.gz hg19 released mixed read lengths, control low read depth, borderline replicate concordance, low read depth, low read length biological replicates with identical biosample insufficient read length, insufficient read depth missing control alignments ENCFF703RUQ bam alignments ENCSR000EGU ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute IRF1-human ENCAB000AHX DNA see document see document False 2011-10-29 ENCODE 1 27 ENCFF000YRO, ENCFF807MUK 519909086 ENCODE Processing Pipeline 33d8ce5a4026c8a02e033acf39c660d6 https://www.encodeproject.org/files/ENCFF703RUQ/@@download/ENCFF703RUQ.bam hg19 released mixed read lengths, control low read depth, borderline replicate concordance, low read depth, low read length biological replicates with identical biosample insufficient read length, insufficient read depth missing control alignments ENCFF987HMV bam alignments ENCSR000EGU ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute IRF1-human ENCAB000AHX DNA see document see document False 2011-10-29 ENCODE 2 27 ENCFF000YSL, ENCFF807MUK 245949919 ENCODE Processing Pipeline c5556c8f6ee39156cbc3fc9c9b2b4fd2 https://www.encodeproject.org/files/ENCFF987HMV/@@download/ENCFF987HMV.bam hg19 released mixed read lengths, control low read depth, borderline replicate concordance, low read depth, low read length biological replicates with identical biosample insufficient read length, insufficient read depth missing control alignments ENCFF408WDT bam alignments ENCSR000EGU ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute IRF1-human ENCAB000AHX DNA see document see document False 2011-10-29 ENCODE 2 27 ENCFF000YSL, ENCFF643CGH 245631124 ENCODE Processing Pipeline dc2245297e525a118531f2d639fa7e10 https://www.encodeproject.org/files/ENCFF408WDT/@@download/ENCFF408WDT.bam GRCh38 released mixed read lengths, control low read depth, borderline replicate concordance, low read depth, low read length biological replicates with identical biosample insufficient read length, insufficient read depth missing control alignments ENCFF309IQN bam unfiltered alignments ENCSR000EGU ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute IRF1-human ENCAB000AHX DNA see document see document False 2011-10-29 ENCODE 2 27 ENCFF000YSL, ENCFF643CGH 425258386 ENCODE Processing Pipeline bbd065c1c106527c044bbfe5bf7bb625 https://www.encodeproject.org/files/ENCFF309IQN/@@download/ENCFF309IQN.bam GRCh38 released mixed read lengths, control low read depth, borderline replicate concordance, low read depth, low read length biological replicates with identical biosample insufficient read length, insufficient read depth missing control alignments ENCFF842WRL bam unfiltered alignments ENCSR000EGU ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute IRF1-human ENCAB000AHX DNA see document see document False 2011-10-29 ENCODE 2 27 ENCFF000YSL, ENCFF807MUK 424106027 ENCODE Processing Pipeline e8ec4b9f8914dac59a3555ee06490520 https://www.encodeproject.org/files/ENCFF842WRL/@@download/ENCFF842WRL.bam hg19 released mixed read lengths, control low read depth, borderline replicate concordance, low read depth, low read length biological replicates with identical biosample insufficient read length, insufficient read depth missing control alignments ENCFF155HUF bam unfiltered alignments ENCSR000EGU ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute IRF1-human ENCAB000AHX DNA see document see document False 2011-10-29 ENCODE 1 27 ENCFF000YRO, ENCFF807MUK 980395573 ENCODE Processing Pipeline 402344e1f68cd8406e76a52ac526a25b https://www.encodeproject.org/files/ENCFF155HUF/@@download/ENCFF155HUF.bam hg19 released mixed read lengths, control low read depth, borderline replicate concordance, low read depth, low read length biological replicates with identical biosample insufficient read length, insufficient read depth missing control alignments ENCFF323VLM bam unfiltered alignments ENCSR000EGU ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute IRF1-human ENCAB000AHX DNA see document see document False 2011-10-29 ENCODE 1 27 ENCFF000YRO, ENCFF643CGH 983884939 ENCODE Processing Pipeline b00a914c0d6774507f3eef3b980237ce https://www.encodeproject.org/files/ENCFF323VLM/@@download/ENCFF323VLM.bam GRCh38 released mixed read lengths, control low read depth, borderline replicate concordance, low read depth, low read length biological replicates with identical biosample insufficient read length, insufficient read depth missing control alignments ENCFF424IRC bam alignments ENCSR000EGU ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute IRF1-human ENCAB000AHX DNA see document see document False 2011-10-29 ENCODE 1 27 ENCFF000YRO, ENCFF643CGH 519320804 ENCODE Processing Pipeline c36a60dbadc68c68beea314d25144441 https://www.encodeproject.org/files/ENCFF424IRC/@@download/ENCFF424IRC.bam GRCh38 released mixed read lengths, control low read depth, borderline replicate concordance, low read depth, low read length biological replicates with identical biosample insufficient read length, insufficient read depth missing control alignments ENCFF444NDO bigWig signal p-value ENCSR000EGU ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute IRF1-human ENCAB000AHX DNA see document see document False 2011-10-29 ENCODE 1 ENCFF424IRC 282518401 ENCODE Processing Pipeline 30f1dfde6b407c918ea62b7eab000cfa https://www.encodeproject.org/files/ENCFF444NDO/@@download/ENCFF444NDO.bigWig GRCh38 released mixed read lengths, control low read depth, borderline replicate concordance, low read depth, low read length biological replicates with identical biosample insufficient read length, insufficient read depth missing control alignments ENCFF922KIS bigWig signal p-value ENCSR000EGU ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute IRF1-human ENCAB000AHX DNA see document see document False 2011-10-29 ENCODE 2 ENCFF408WDT 282732441 ENCODE Processing Pipeline 0f9d3093a41e2d7c0141053a1dad34c6 https://www.encodeproject.org/files/ENCFF922KIS/@@download/ENCFF922KIS.bigWig GRCh38 released mixed read lengths, control low read depth, borderline replicate concordance, low read depth, low read length biological replicates with identical biosample insufficient read length, insufficient read depth missing control alignments ENCFF532JZZ bigWig signal p-value ENCSR000EGU ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute IRF1-human ENCAB000AHX DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF408WDT, ENCFF424IRC 323212589 ENCODE Processing Pipeline f4f8a7359d5e5856252598ff797a7545 https://www.encodeproject.org/files/ENCFF532JZZ/@@download/ENCFF532JZZ.bigWig GRCh38 released mixed read lengths, control low read depth, borderline replicate concordance, low read depth, low read length biological replicates with identical biosample insufficient read length, insufficient read depth missing control alignments ENCFF585PVX bigWig fold change over control ENCSR000EGU ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute IRF1-human ENCAB000AHX DNA see document see document False 2011-10-29 ENCODE 1 ENCFF424IRC 235276034 ENCODE Processing Pipeline b904eaa8eed0e48bcde47118f6c30ed8 https://www.encodeproject.org/files/ENCFF585PVX/@@download/ENCFF585PVX.bigWig GRCh38 released mixed read lengths, control low read depth, borderline replicate concordance, low read depth, low read length biological replicates with identical biosample insufficient read length, insufficient read depth missing control alignments ENCFF288CBF bigWig fold change over control ENCSR000EGU ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute IRF1-human ENCAB000AHX DNA see document see document False 2011-10-29 ENCODE 2 ENCFF408WDT 111379969 ENCODE Processing Pipeline 2f4c2bb3a980a7d76be63368884d8140 https://www.encodeproject.org/files/ENCFF288CBF/@@download/ENCFF288CBF.bigWig GRCh38 released mixed read lengths, control low read depth, borderline replicate concordance, low read depth, low read length biological replicates with identical biosample insufficient read length, insufficient read depth missing control alignments ENCFF918SEG bigWig fold change over control ENCSR000EGU ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute IRF1-human ENCAB000AHX DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF408WDT, ENCFF424IRC 324445388 ENCODE Processing Pipeline cd17e57491bcaf5f786e5e45e76afff7 https://www.encodeproject.org/files/ENCFF918SEG/@@download/ENCFF918SEG.bigWig GRCh38 released mixed read lengths, control low read depth, borderline replicate concordance, low read depth, low read length biological replicates with identical biosample insufficient read length, insufficient read depth missing control alignments ENCFF219ASD bed narrowPeak peaks ENCSR000EGU ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute IRF1-human ENCAB000AHX DNA see document see document False 2011-10-29 ENCODE 2 ENCFF650MOB, ENCFF987HMV 1312157 ENCODE Processing Pipeline ba4142a08406d6848b8a81ea3f408093 https://www.encodeproject.org/files/ENCFF219ASD/@@download/ENCFF219ASD.bed.gz hg19 released mixed read lengths, control low read depth, borderline replicate concordance, low read depth, low read length biological replicates with identical biosample insufficient read length, insufficient read depth missing control alignments ENCFF879FJY bed narrowPeak peaks ENCSR000EGU ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute IRF1-human ENCAB000AHX DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF650MOB, ENCFF703RUQ, ENCFF987HMV 3968756 ENCODE Processing Pipeline 6b8025ab93e2ea417d308144f5921a3f https://www.encodeproject.org/files/ENCFF879FJY/@@download/ENCFF879FJY.bed.gz hg19 released mixed read lengths, control low read depth, borderline replicate concordance, low read depth, low read length biological replicates with identical biosample insufficient read length, insufficient read depth missing control alignments ENCFF031DNM bed narrowPeak peaks ENCSR000EGU ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute IRF1-human ENCAB000AHX DNA see document see document False 2011-10-29 ENCODE 1 ENCFF424IRC 3615253 ENCODE Processing Pipeline a234f6f136cb231e9cd11036e0ec0593 https://www.encodeproject.org/files/ENCFF031DNM/@@download/ENCFF031DNM.bed.gz GRCh38 released mixed read lengths, control low read depth, borderline replicate concordance, low read depth, low read length biological replicates with identical biosample insufficient read length, insufficient read depth missing control alignments ENCFF559DAP bed narrowPeak peaks ENCSR000EGU ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute IRF1-human ENCAB000AHX DNA see document see document False 2011-10-29 ENCODE 2 ENCFF408WDT 1309496 ENCODE Processing Pipeline 356bc0f3f02a93ed3434d51d03affa80 https://www.encodeproject.org/files/ENCFF559DAP/@@download/ENCFF559DAP.bed.gz GRCh38 released mixed read lengths, control low read depth, borderline replicate concordance, low read depth, low read length biological replicates with identical biosample insufficient read length, insufficient read depth missing control alignments ENCFF791AFK bed narrowPeak peaks ENCSR000EGU ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute IRF1-human ENCAB000AHX DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF408WDT, ENCFF424IRC 3969537 ENCODE Processing Pipeline 68ed598dbee5fe56e275afed7b300afe https://www.encodeproject.org/files/ENCFF791AFK/@@download/ENCFF791AFK.bed.gz GRCh38 released mixed read lengths, control low read depth, borderline replicate concordance, low read depth, low read length biological replicates with identical biosample insufficient read length, insufficient read depth missing control alignments ENCFF398EPO bigBed narrowPeak peaks ENCSR000EGU ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute IRF1-human ENCAB000AHX DNA see document see document False 2011-10-29 ENCODE 1 ENCFF031DNM 7556813 ENCODE Processing Pipeline cfc36ff1b75680eb3693ccd1d2e750f6 https://www.encodeproject.org/files/ENCFF398EPO/@@download/ENCFF398EPO.bigBed GRCh38 released mixed read lengths, control low read depth, borderline replicate concordance, low read depth, low read length biological replicates with identical biosample insufficient read length, insufficient read depth missing control alignments ENCFF006RQP bigBed narrowPeak peaks ENCSR000EGU ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute IRF1-human ENCAB000AHX DNA see document see document False 2011-10-29 ENCODE 2 ENCFF559DAP 2497462 ENCODE Processing Pipeline f67480a82614ea01ea25af7a186e54d6 https://www.encodeproject.org/files/ENCFF006RQP/@@download/ENCFF006RQP.bigBed GRCh38 released mixed read lengths, control low read depth, borderline replicate concordance, low read depth, low read length biological replicates with identical biosample insufficient read length, insufficient read depth missing control alignments ENCFF710XYY bed narrowPeak conservative idr thresholded peaks ENCSR000EGU ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute IRF1-human ENCAB000AHX DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF031DNM, ENCFF419RSJ, ENCFF559DAP, ENCFF791AFK 17475 ENCODE Processing Pipeline ce40ea051561bfde93605e70e4b46a0f https://www.encodeproject.org/files/ENCFF710XYY/@@download/ENCFF710XYY.bed.gz GRCh38 released mixed read lengths, control low read depth, borderline replicate concordance, low read depth, low read length biological replicates with identical biosample insufficient read length, insufficient read depth missing control alignments ENCFF604RIZ bigBed narrowPeak peaks ENCSR000EGU ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute IRF1-human ENCAB000AHX DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF791AFK 10127158 ENCODE Processing Pipeline 0e26d4a44a1749bd84c3abd953a700d8 https://www.encodeproject.org/files/ENCFF604RIZ/@@download/ENCFF604RIZ.bigBed GRCh38 released mixed read lengths, control low read depth, borderline replicate concordance, low read depth, low read length biological replicates with identical biosample insufficient read length, insufficient read depth missing control alignments ENCFF223RDF bigBed narrowPeak conservative idr thresholded peaks ENCSR000EGU ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute IRF1-human ENCAB000AHX DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF710XYY 72674 ENCODE Processing Pipeline 0bd1e6e7126704597d8d7389f2ac834d https://www.encodeproject.org/files/ENCFF223RDF/@@download/ENCFF223RDF.bigBed GRCh38 released mixed read lengths, control low read depth, borderline replicate concordance, low read depth, low read length biological replicates with identical biosample insufficient read length, insufficient read depth missing control alignments ENCFF938NBD bed narrowPeak optimal idr thresholded peaks ENCSR000EGU ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute IRF1-human ENCAB000AHX DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF031DNM, ENCFF419RSJ, ENCFF559DAP, ENCFF791AFK 28320 ENCODE Processing Pipeline 84e979cfdb944d58bb9a920cf52161ed https://www.encodeproject.org/files/ENCFF938NBD/@@download/ENCFF938NBD.bed.gz GRCh38 released mixed read lengths, control low read depth, borderline replicate concordance, low read depth, low read length biological replicates with identical biosample insufficient read length, insufficient read depth missing control alignments ENCFF836JCP bigBed narrowPeak optimal idr thresholded peaks ENCSR000EGU ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute IRF1-human ENCAB000AHX DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF938NBD 87814 ENCODE Processing Pipeline 5b7d6418ae7ed9f420a17c310e5e8a04 https://www.encodeproject.org/files/ENCFF836JCP/@@download/ENCFF836JCP.bigBed GRCh38 released mixed read lengths, control low read depth, borderline replicate concordance, low read depth, low read length biological replicates with identical biosample insufficient read length, insufficient read depth missing control alignments ENCFF939LGE bam unfiltered alignments ENCSR387UWP ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC1-human ENCAB508CZJ DNA False 2016-06-14 ENCODE 1 100 ENCFF034CSX, ENCFF807MUK, ENCFF919QDE 3748955806 ENCODE Processing Pipeline d01e96e863248ff27c9298bb8b419ecb https://www.encodeproject.org/files/ENCFF939LGE/@@download/ENCFF939LGE.bam hg19 released low read depth, mild to moderate bottlenecking ENCFF750SDO bam unfiltered alignments ENCSR387UWP ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC1-human ENCAB508CZJ DNA False 2016-06-14 ENCODE 2 100 ENCFF517OWM, ENCFF807MUK, ENCFF871YPD 5436288599 ENCODE Processing Pipeline 1d4f366796627d242204712296cbbd7e https://www.encodeproject.org/files/ENCFF750SDO/@@download/ENCFF750SDO.bam hg19 released low read depth, mild to moderate bottlenecking ENCFF871YPD fastq reads ENCSR387UWP ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC1-human ENCAB508CZJ DNA False 2016-06-14 ENCODE 2 1 100 paired-ended 2 ENCFF517OWM 2665922318 Michael Snyder, Stanford 48e93287c731aaebf76544ce0fbce53c SRA:SRR5111603 https://www.encodeproject.org/files/ENCFF871YPD/@@download/ENCFF871YPD.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFA/ released low read depth, mild to moderate bottlenecking ENCFF517OWM fastq reads ENCSR387UWP ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC1-human ENCAB508CZJ DNA False 2016-06-14 ENCODE 2 1 100 paired-ended 1 ENCFF871YPD 2529102529 Michael Snyder, Stanford 16d6efc238732415c34b547ecacad3ca SRA:SRR5111603 https://www.encodeproject.org/files/ENCFF517OWM/@@download/ENCFF517OWM.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFD/ released low read depth, mild to moderate bottlenecking ENCFF919QDE fastq reads ENCSR387UWP ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC1-human ENCAB508CZJ DNA False 2016-06-14 ENCODE 1 1 100 paired-ended 1 ENCFF034CSX 1771064112 Michael Snyder, Stanford 54cabe416864e686cd2161d78657e096 SRA:SRR5111602 https://www.encodeproject.org/files/ENCFF919QDE/@@download/ENCFF919QDE.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFF/ released low read depth, mild to moderate bottlenecking ENCFF034CSX fastq reads ENCSR387UWP ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC1-human ENCAB508CZJ DNA False 2016-06-14 ENCODE 1 1 100 paired-ended 2 ENCFF919QDE 1793882598 Michael Snyder, Stanford 740ce175817a2fc59f04bd5441eab3dc SRA:SRR5111602 https://www.encodeproject.org/files/ENCFF034CSX/@@download/ENCFF034CSX.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFH/ released low read depth, mild to moderate bottlenecking ENCFF530XAQ bam alignments ENCSR387UWP ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC1-human ENCAB508CZJ DNA False 2016-06-14 ENCODE 1 100 ENCFF034CSX, ENCFF807MUK, ENCFF919QDE 3005093588 ENCODE Processing Pipeline 44d7f71b8900a0c78246076f20884ab7 https://www.encodeproject.org/files/ENCFF530XAQ/@@download/ENCFF530XAQ.bam hg19 released low read depth, mild to moderate bottlenecking ENCFF233IID bam alignments ENCSR387UWP ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC1-human ENCAB508CZJ DNA False 2016-06-14 ENCODE 2 100 ENCFF517OWM, ENCFF807MUK, ENCFF871YPD 3939101728 ENCODE Processing Pipeline d3d4491d150a2fa7c1be3db71c65b56c https://www.encodeproject.org/files/ENCFF233IID/@@download/ENCFF233IID.bam hg19 released low read depth, mild to moderate bottlenecking ENCFF713JQU bigWig signal p-value ENCSR387UWP ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC1-human ENCAB508CZJ DNA False 2016-06-14 ENCODE 1 ENCFF530XAQ, ENCFF581ZJL 903917571 ENCODE Processing Pipeline 7396290222c48423821ad4389893a6f0 https://www.encodeproject.org/files/ENCFF713JQU/@@download/ENCFF713JQU.bigWig hg19 released low read depth, mild to moderate bottlenecking ENCFF745HMO bigWig signal p-value ENCSR387UWP ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC1-human ENCAB508CZJ DNA False 2016-06-14 ENCODE 2 ENCFF051LWI, ENCFF233IID 1077728229 ENCODE Processing Pipeline e358a051651a62d46ad0ba99e712786f https://www.encodeproject.org/files/ENCFF745HMO/@@download/ENCFF745HMO.bigWig hg19 released low read depth, mild to moderate bottlenecking ENCFF808OOA bigWig signal p-value ENCSR387UWP ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC1-human ENCAB508CZJ DNA False 2016-06-14 ENCODE 1, 2 ENCFF051LWI, ENCFF233IID, ENCFF530XAQ, ENCFF581ZJL 1701353077 ENCODE Processing Pipeline 96a7dd693939dcdbf1327c09e885e53f https://www.encodeproject.org/files/ENCFF808OOA/@@download/ENCFF808OOA.bigWig hg19 released low read depth, mild to moderate bottlenecking ENCFF617KYS bigWig fold change over control ENCSR387UWP ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC1-human ENCAB508CZJ DNA False 2016-06-14 ENCODE 1 ENCFF530XAQ, ENCFF581ZJL 973975195 ENCODE Processing Pipeline 0f6494201a16de6d9cdf74cb0e1f487a https://www.encodeproject.org/files/ENCFF617KYS/@@download/ENCFF617KYS.bigWig hg19 released low read depth, mild to moderate bottlenecking ENCFF757WQB bigWig fold change over control ENCSR387UWP ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC1-human ENCAB508CZJ DNA False 2016-06-14 ENCODE 2 ENCFF051LWI, ENCFF233IID 1079513595 ENCODE Processing Pipeline 9e7279958950ae754bb30b74991fce92 https://www.encodeproject.org/files/ENCFF757WQB/@@download/ENCFF757WQB.bigWig hg19 released low read depth, mild to moderate bottlenecking ENCFF645PUW bigWig fold change over control ENCSR387UWP ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC1-human ENCAB508CZJ DNA False 2016-06-14 ENCODE 1, 2 ENCFF051LWI, ENCFF233IID, ENCFF530XAQ, ENCFF581ZJL 1951465679 ENCODE Processing Pipeline 901c6e7ed25574a1aa6b7a38bdffbc36 https://www.encodeproject.org/files/ENCFF645PUW/@@download/ENCFF645PUW.bigWig hg19 released low read depth, mild to moderate bottlenecking ENCFF221YZK bed narrowPeak peaks ENCSR387UWP ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC1-human ENCAB508CZJ DNA False 2016-06-14 ENCODE 1 ENCFF530XAQ, ENCFF581ZJL 6885176 ENCODE Processing Pipeline c1e525a49f7412ded1a318d271cfeeda https://www.encodeproject.org/files/ENCFF221YZK/@@download/ENCFF221YZK.bed.gz hg19 released low read depth, mild to moderate bottlenecking ENCFF873ZUQ bed narrowPeak peaks ENCSR387UWP ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC1-human ENCAB508CZJ DNA False 2016-06-14 ENCODE 2 ENCFF051LWI, ENCFF233IID 6929067 ENCODE Processing Pipeline e474c90e1cb307a33e2f01fe1d28d6e2 https://www.encodeproject.org/files/ENCFF873ZUQ/@@download/ENCFF873ZUQ.bed.gz hg19 released low read depth, mild to moderate bottlenecking ENCFF113GBF bed narrowPeak peaks ENCSR387UWP ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC1-human ENCAB508CZJ DNA False 2016-06-14 ENCODE 1, 2 ENCFF051LWI, ENCFF233IID, ENCFF530XAQ, ENCFF581ZJL 7265651 ENCODE Processing Pipeline 71b3437d73c0c5e183b5f44e7c76ae45 https://www.encodeproject.org/files/ENCFF113GBF/@@download/ENCFF113GBF.bed.gz hg19 released low read depth, mild to moderate bottlenecking ENCFF690IPE bigBed narrowPeak peaks ENCSR387UWP ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC1-human ENCAB508CZJ DNA False 2016-06-14 ENCODE 2 ENCFF873ZUQ 13149635 ENCODE Processing Pipeline 2f0dfe3d028d432d29d11e365ea958c0 https://www.encodeproject.org/files/ENCFF690IPE/@@download/ENCFF690IPE.bigBed hg19 released low read depth, mild to moderate bottlenecking ENCFF392YGM bigBed narrowPeak peaks ENCSR387UWP ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC1-human ENCAB508CZJ DNA False 2016-06-14 ENCODE 1 ENCFF221YZK 12975506 ENCODE Processing Pipeline f814cca783a8923e72a53f101424ffc7 https://www.encodeproject.org/files/ENCFF392YGM/@@download/ENCFF392YGM.bigBed hg19 released low read depth, mild to moderate bottlenecking ENCFF903IAE bigBed narrowPeak peaks ENCSR387UWP ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC1-human ENCAB508CZJ DNA False 2016-06-14 ENCODE 1, 2 ENCFF113GBF 13061836 ENCODE Processing Pipeline cc41b6cefadba38cc660c439770de675 https://www.encodeproject.org/files/ENCFF903IAE/@@download/ENCFF903IAE.bigBed hg19 released low read depth, mild to moderate bottlenecking ENCFF278JTC bam unfiltered alignments ENCSR387UWP ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC1-human ENCAB508CZJ DNA False 2016-06-14 ENCODE 1 100 ENCFF034CSX, ENCFF643CGH, ENCFF919QDE 3751592657 ENCODE Processing Pipeline ab306a81027ccb88959e810247a388eb https://www.encodeproject.org/files/ENCFF278JTC/@@download/ENCFF278JTC.bam GRCh38 released low read depth, mild to moderate bottlenecking ENCFF035YWU bam unfiltered alignments ENCSR387UWP ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC1-human ENCAB508CZJ DNA False 2016-06-14 ENCODE 2 100 ENCFF517OWM, ENCFF643CGH, ENCFF871YPD 5440788967 ENCODE Processing Pipeline a71d473c2d4c9042803e68f348d7fb28 https://www.encodeproject.org/files/ENCFF035YWU/@@download/ENCFF035YWU.bam GRCh38 released low read depth, mild to moderate bottlenecking ENCFF677JTW bam alignments ENCSR387UWP ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC1-human ENCAB508CZJ DNA False 2016-06-14 ENCODE 1 100 ENCFF034CSX, ENCFF643CGH, ENCFF919QDE 3007269920 ENCODE Processing Pipeline 7bda913a78f00c6be4658dee12a82dd2 https://www.encodeproject.org/files/ENCFF677JTW/@@download/ENCFF677JTW.bam GRCh38 released low read depth, mild to moderate bottlenecking ENCFF921IAQ bam alignments ENCSR387UWP ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC1-human ENCAB508CZJ DNA False 2016-06-14 ENCODE 2 100 ENCFF517OWM, ENCFF643CGH, ENCFF871YPD 3941423913 ENCODE Processing Pipeline fd4937419f5a0d3a75771c14ead719a8 https://www.encodeproject.org/files/ENCFF921IAQ/@@download/ENCFF921IAQ.bam GRCh38 released low read depth, mild to moderate bottlenecking ENCFF745KBP bigWig signal p-value ENCSR387UWP ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC1-human ENCAB508CZJ DNA False 2016-06-14 ENCODE 1 ENCFF677JTW, ENCFF910IKB 921104656 ENCODE Processing Pipeline e96ea40f8e1c14afce50ea6815ea206d https://www.encodeproject.org/files/ENCFF745KBP/@@download/ENCFF745KBP.bigWig GRCh38 released low read depth, mild to moderate bottlenecking ENCFF250CUR bigWig signal p-value ENCSR387UWP ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC1-human ENCAB508CZJ DNA False 2016-06-14 ENCODE 2 ENCFF227IZS, ENCFF921IAQ 1176550057 ENCODE Processing Pipeline 97c9cdfa0bbc3e2289dfc6e16a32638c https://www.encodeproject.org/files/ENCFF250CUR/@@download/ENCFF250CUR.bigWig GRCh38 released low read depth, mild to moderate bottlenecking ENCFF840VLD bigWig signal p-value ENCSR387UWP ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC1-human ENCAB508CZJ DNA False 2016-06-14 ENCODE 1, 2 ENCFF227IZS, ENCFF677JTW, ENCFF910IKB, ENCFF921IAQ 1676566559 ENCODE Processing Pipeline 17b3b4309ea0914825d19e0791e1b6ac https://www.encodeproject.org/files/ENCFF840VLD/@@download/ENCFF840VLD.bigWig GRCh38 released low read depth, mild to moderate bottlenecking ENCFF354MLS bigWig fold change over control ENCSR387UWP ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC1-human ENCAB508CZJ DNA False 2016-06-14 ENCODE 1 ENCFF677JTW, ENCFF910IKB 982368473 ENCODE Processing Pipeline 80e7bff511a56586bfa472b9e14d3909 https://www.encodeproject.org/files/ENCFF354MLS/@@download/ENCFF354MLS.bigWig GRCh38 released low read depth, mild to moderate bottlenecking ENCFF837BQA bigWig fold change over control ENCSR387UWP ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC1-human ENCAB508CZJ DNA False 2016-06-14 ENCODE 2 ENCFF227IZS, ENCFF921IAQ 1074872561 ENCODE Processing Pipeline 8533d711573370b1b25552178e95a81f https://www.encodeproject.org/files/ENCFF837BQA/@@download/ENCFF837BQA.bigWig GRCh38 released low read depth, mild to moderate bottlenecking ENCFF412CHL bigWig fold change over control ENCSR387UWP ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC1-human ENCAB508CZJ DNA False 2016-06-14 ENCODE 1, 2 ENCFF227IZS, ENCFF677JTW, ENCFF910IKB, ENCFF921IAQ 1965670732 ENCODE Processing Pipeline e5f8340e9aa76aeef1e6a9356bcde9c4 https://www.encodeproject.org/files/ENCFF412CHL/@@download/ENCFF412CHL.bigWig GRCh38 released low read depth, mild to moderate bottlenecking ENCFF721IEI bed narrowPeak peaks ENCSR387UWP ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC1-human ENCAB508CZJ DNA False 2016-06-14 ENCODE 1 ENCFF677JTW, ENCFF910IKB 6896401 ENCODE Processing Pipeline d7e66e9fb69a79fe7ca8bfb8f141c140 https://www.encodeproject.org/files/ENCFF721IEI/@@download/ENCFF721IEI.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking ENCFF496FSD bed narrowPeak peaks ENCSR387UWP ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC1-human ENCAB508CZJ DNA False 2016-06-14 ENCODE 2 ENCFF227IZS, ENCFF921IAQ 6919479 ENCODE Processing Pipeline 84950b2e86b94b363dba0e762af5bfe6 https://www.encodeproject.org/files/ENCFF496FSD/@@download/ENCFF496FSD.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking ENCFF513MBZ bed narrowPeak peaks ENCSR387UWP ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC1-human ENCAB508CZJ DNA False 2016-06-14 ENCODE 1, 2 ENCFF227IZS, ENCFF677JTW, ENCFF910IKB, ENCFF921IAQ 7165764 ENCODE Processing Pipeline 77ed071150e5a7f4fd4c7255cdff21f5 https://www.encodeproject.org/files/ENCFF513MBZ/@@download/ENCFF513MBZ.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking ENCFF031SFM bigBed narrowPeak peaks ENCSR387UWP ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC1-human ENCAB508CZJ DNA False 2016-06-14 ENCODE 1 ENCFF721IEI 13069350 ENCODE Processing Pipeline 778b7d38c7f12e4a8d7a51dac5c6081a https://www.encodeproject.org/files/ENCFF031SFM/@@download/ENCFF031SFM.bigBed GRCh38 released low read depth, mild to moderate bottlenecking ENCFF274JDL bigBed narrowPeak peaks ENCSR387UWP ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC1-human ENCAB508CZJ DNA False 2016-06-14 ENCODE 2 ENCFF496FSD 13234842 ENCODE Processing Pipeline f89bd7425134438676aaaadd66fa9b3e https://www.encodeproject.org/files/ENCFF274JDL/@@download/ENCFF274JDL.bigBed GRCh38 released low read depth, mild to moderate bottlenecking ENCFF287BWE bigBed narrowPeak peaks ENCSR387UWP ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC1-human ENCAB508CZJ DNA False 2016-06-14 ENCODE 1, 2 ENCFF513MBZ 12962979 ENCODE Processing Pipeline 4206ff05799106168d38d79e00d3eb0d https://www.encodeproject.org/files/ENCFF287BWE/@@download/ENCFF287BWE.bigBed GRCh38 released low read depth, mild to moderate bottlenecking ENCFF410AIK bed narrowPeak conservative idr thresholded peaks ENCSR387UWP ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC1-human ENCAB508CZJ DNA False 2016-06-14 ENCODE 1, 2 ENCFF419RSJ, ENCFF496FSD, ENCFF513MBZ, ENCFF721IEI 823921 ENCODE Processing Pipeline ee71e829565cd6295cda45d76c7dd53c https://www.encodeproject.org/files/ENCFF410AIK/@@download/ENCFF410AIK.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking ENCFF308EHU bigBed narrowPeak conservative idr thresholded peaks ENCSR387UWP ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC1-human ENCAB508CZJ DNA False 2016-06-14 ENCODE 1, 2 ENCFF410AIK 1823230 ENCODE Processing Pipeline 8675153028a377a0445e63568742e33b https://www.encodeproject.org/files/ENCFF308EHU/@@download/ENCFF308EHU.bigBed GRCh38 released low read depth, mild to moderate bottlenecking ENCFF188TBM bed narrowPeak optimal idr thresholded peaks ENCSR387UWP ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC1-human ENCAB508CZJ DNA False 2016-06-14 ENCODE 1, 2 ENCFF419RSJ, ENCFF496FSD, ENCFF513MBZ, ENCFF721IEI 917615 ENCODE Processing Pipeline fb05b3614c249aebaa15b71588273a47 https://www.encodeproject.org/files/ENCFF188TBM/@@download/ENCFF188TBM.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking ENCFF821VTI bigBed narrowPeak optimal idr thresholded peaks ENCSR387UWP ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC1-human ENCAB508CZJ DNA False 2016-06-14 ENCODE 1, 2 ENCFF188TBM 1990537 ENCODE Processing Pipeline 3654074044b94a3a0b35f11e675e5054 https://www.encodeproject.org/files/ENCFF821VTI/@@download/ENCFF821VTI.bigBed GRCh38 released low read depth, mild to moderate bottlenecking ENCFF925QJY bed narrowPeak conservative idr thresholded peaks ENCSR387UWP ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC1-human ENCAB508CZJ DNA False 2016-06-14 ENCODE 1, 2 ENCFF001TDO, ENCFF113GBF, ENCFF221YZK, ENCFF873ZUQ 714422 ENCODE Processing Pipeline 317638949f22b9bfc1969222e65adab9 https://www.encodeproject.org/files/ENCFF925QJY/@@download/ENCFF925QJY.bed.gz hg19 released low read depth, mild to moderate bottlenecking ENCFF799EGD bigBed narrowPeak conservative idr thresholded peaks ENCSR387UWP ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC1-human ENCAB508CZJ DNA False 2016-06-14 ENCODE 1, 2 ENCFF925QJY 1313499 ENCODE Processing Pipeline 6a171112404341ded048e0778be598d1 https://www.encodeproject.org/files/ENCFF799EGD/@@download/ENCFF799EGD.bigBed hg19 released low read depth, mild to moderate bottlenecking ENCFF019ALY bed narrowPeak optimal idr thresholded peaks ENCSR387UWP ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC1-human ENCAB508CZJ DNA False 2016-06-14 ENCODE 1, 2 ENCFF001TDO, ENCFF113GBF, ENCFF221YZK, ENCFF873ZUQ 807730 ENCODE Processing Pipeline 6e5b27278b7140bede72c439e1f952d4 https://www.encodeproject.org/files/ENCFF019ALY/@@download/ENCFF019ALY.bed.gz hg19 released low read depth, mild to moderate bottlenecking ENCFF401SGX bigBed narrowPeak optimal idr thresholded peaks ENCSR387UWP ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC1-human ENCAB508CZJ DNA False 2016-06-14 ENCODE 1, 2 ENCFF019ALY 1435263 ENCODE Processing Pipeline 9c1352cceea2394dc716a3504b19e4c1 https://www.encodeproject.org/files/ENCFF401SGX/@@download/ENCFF401SGX.bigBed hg19 released low read depth, mild to moderate bottlenecking ENCFF416OBK bam unfiltered alignments ENCSR051OUX ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFATC3-human ENCAB375FHW DNA False 2018-01-26 ENCODE 1 100 ENCFF163AGA, ENCFF352NWK, ENCFF807MUK 4735088043 ENCODE Processing Pipeline 826ce8079b26f24aba642b5a2058091a https://www.encodeproject.org/files/ENCFF416OBK/@@download/ENCFF416OBK.bam hg19 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF670NTA bam unfiltered alignments ENCSR051OUX ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFATC3-human ENCAB375FHW DNA False 2018-01-26 ENCODE 2 100 ENCFF007RQD, ENCFF106LFT, ENCFF807MUK 4766948184 ENCODE Processing Pipeline 77ac135a235f2f16cae9e59664650cbd https://www.encodeproject.org/files/ENCFF670NTA/@@download/ENCFF670NTA.bam hg19 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF007RQD fastq reads ENCSR051OUX ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFATC3-human ENCAB375FHW DNA False 2018-01-26 ENCODE 2 1 100 paired-ended 1 ENCFF106LFT 2131716056 Michael Snyder, Stanford f7b3750f273fe677d2aff7e3db553d24 https://www.encodeproject.org/files/ENCFF007RQD/@@download/ENCFF007RQD.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFD/ released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF106LFT fastq reads ENCSR051OUX ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFATC3-human ENCAB375FHW DNA False 2018-01-26 ENCODE 2 1 100 paired-ended 2 ENCFF007RQD 2214329539 Michael Snyder, Stanford ebb93f2992b5b6638afce0ddc7e5cdc0 https://www.encodeproject.org/files/ENCFF106LFT/@@download/ENCFF106LFT.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFA/ released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF163AGA fastq reads ENCSR051OUX ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFATC3-human ENCAB375FHW DNA False 2018-01-26 ENCODE 1 1 100 paired-ended 1 ENCFF352NWK 2117849552 Michael Snyder, Stanford 13c686b946f93611d38d0033fe4749ec https://www.encodeproject.org/files/ENCFF163AGA/@@download/ENCFF163AGA.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFF/ released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF352NWK fastq reads ENCSR051OUX ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFATC3-human ENCAB375FHW DNA False 2018-01-26 ENCODE 1 1 100 paired-ended 2 ENCFF163AGA 2146540108 Michael Snyder, Stanford db09a2963f1c5527bf9887e2014c8e93 https://www.encodeproject.org/files/ENCFF352NWK/@@download/ENCFF352NWK.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFH/ released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF208FMF bam alignments ENCSR051OUX ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFATC3-human ENCAB375FHW DNA False 2018-01-26 ENCODE 1 100 ENCFF163AGA, ENCFF352NWK, ENCFF807MUK 3943203361 ENCODE Processing Pipeline 2a0ab4f554555910ce80e1819ade9553 https://www.encodeproject.org/files/ENCFF208FMF/@@download/ENCFF208FMF.bam hg19 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF421LSY bam alignments ENCSR051OUX ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFATC3-human ENCAB375FHW DNA False 2018-01-26 ENCODE 2 100 ENCFF007RQD, ENCFF106LFT, ENCFF807MUK 3778326135 ENCODE Processing Pipeline e2e5c0566cd420f6cc4c78e615b3826a https://www.encodeproject.org/files/ENCFF421LSY/@@download/ENCFF421LSY.bam hg19 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF281WOS bigWig signal p-value ENCSR051OUX ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFATC3-human ENCAB375FHW DNA False 2018-01-26 ENCODE 1 ENCFF208FMF, ENCFF581ZJL 1102553027 ENCODE Processing Pipeline 1311440497e155118a847965c2200fa4 https://www.encodeproject.org/files/ENCFF281WOS/@@download/ENCFF281WOS.bigWig hg19 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF258LLV bigWig signal p-value ENCSR051OUX ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFATC3-human ENCAB375FHW DNA False 2018-01-26 ENCODE 1, 2 ENCFF051LWI, ENCFF208FMF, ENCFF421LSY, ENCFF581ZJL 1782723512 ENCODE Processing Pipeline 32fe1d25251124548fbd26dd21edf5d1 https://www.encodeproject.org/files/ENCFF258LLV/@@download/ENCFF258LLV.bigWig hg19 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF214CMH bigWig fold change over control ENCSR051OUX ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFATC3-human ENCAB375FHW DNA False 2018-01-26 ENCODE 1 ENCFF208FMF, ENCFF581ZJL 1117850225 ENCODE Processing Pipeline 40a9ce38ca1936bc562d3fe6e6b508b7 https://www.encodeproject.org/files/ENCFF214CMH/@@download/ENCFF214CMH.bigWig hg19 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF368HBP bigWig fold change over control ENCSR051OUX ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFATC3-human ENCAB375FHW DNA False 2018-01-26 ENCODE 1, 2 ENCFF051LWI, ENCFF208FMF, ENCFF421LSY, ENCFF581ZJL 2041525437 ENCODE Processing Pipeline 4a4dfcb9075727fc0b54d0f4f9270527 https://www.encodeproject.org/files/ENCFF368HBP/@@download/ENCFF368HBP.bigWig hg19 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF918GZF bam unfiltered alignments ENCSR051OUX ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFATC3-human ENCAB375FHW DNA False 2018-01-26 ENCODE 1 100 ENCFF163AGA, ENCFF352NWK, ENCFF643CGH 4739112566 ENCODE Processing Pipeline 8ac666f21646820e46e6318b82efd5b1 https://www.encodeproject.org/files/ENCFF918GZF/@@download/ENCFF918GZF.bam GRCh38 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF758AFU bam unfiltered alignments ENCSR051OUX ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFATC3-human ENCAB375FHW DNA False 2018-01-26 ENCODE 2 100 ENCFF007RQD, ENCFF106LFT, ENCFF643CGH 4770748406 ENCODE Processing Pipeline 991b5b584eafed148cf0fab6ced02004 https://www.encodeproject.org/files/ENCFF758AFU/@@download/ENCFF758AFU.bam GRCh38 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF059NNP bam alignments ENCSR051OUX ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFATC3-human ENCAB375FHW DNA False 2018-01-26 ENCODE 2 100 ENCFF007RQD, ENCFF106LFT, ENCFF643CGH 3781275125 ENCODE Processing Pipeline 0864d365af2b053081e646a5d3013290 https://www.encodeproject.org/files/ENCFF059NNP/@@download/ENCFF059NNP.bam GRCh38 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF221GWS bam alignments ENCSR051OUX ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFATC3-human ENCAB375FHW DNA False 2018-01-26 ENCODE 1 100 ENCFF163AGA, ENCFF352NWK, ENCFF643CGH 3946453394 ENCODE Processing Pipeline 9f4ad88565dc7f0df264e0c0dcbae598 https://www.encodeproject.org/files/ENCFF221GWS/@@download/ENCFF221GWS.bam GRCh38 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF630UMR bigWig signal p-value ENCSR051OUX ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFATC3-human ENCAB375FHW DNA False 2018-01-26 ENCODE 1 ENCFF221GWS, ENCFF910IKB 982861224 ENCODE Processing Pipeline b40afd388332197472c16fe4b905621b https://www.encodeproject.org/files/ENCFF630UMR/@@download/ENCFF630UMR.bigWig GRCh38 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF804DBD bigWig signal p-value ENCSR051OUX ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFATC3-human ENCAB375FHW DNA False 2018-01-26 ENCODE 2 ENCFF059NNP, ENCFF227IZS 1085344703 ENCODE Processing Pipeline 977dd385b4890ad9b8f43729f7ed1095 https://www.encodeproject.org/files/ENCFF804DBD/@@download/ENCFF804DBD.bigWig GRCh38 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF662QET bigWig signal p-value ENCSR051OUX ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFATC3-human ENCAB375FHW DNA False 2018-01-26 ENCODE 1, 2 ENCFF059NNP, ENCFF221GWS, ENCFF227IZS, ENCFF910IKB 1911268356 ENCODE Processing Pipeline 985db95cb2157e445f7fc2f3c2e79696 https://www.encodeproject.org/files/ENCFF662QET/@@download/ENCFF662QET.bigWig GRCh38 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF451IKP bigWig fold change over control ENCSR051OUX ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFATC3-human ENCAB375FHW DNA False 2018-01-26 ENCODE 1 ENCFF221GWS, ENCFF910IKB 1132202844 ENCODE Processing Pipeline c706a1d7a587832dfc62f4514201feb9 https://www.encodeproject.org/files/ENCFF451IKP/@@download/ENCFF451IKP.bigWig GRCh38 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF606TWO bigWig fold change over control ENCSR051OUX ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFATC3-human ENCAB375FHW DNA False 2018-01-26 ENCODE 2 ENCFF059NNP, ENCFF227IZS 1101555551 ENCODE Processing Pipeline 7d0e1becc3b8b43d58a4200fa3dedfd6 https://www.encodeproject.org/files/ENCFF606TWO/@@download/ENCFF606TWO.bigWig GRCh38 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF322YEU bigWig fold change over control ENCSR051OUX ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFATC3-human ENCAB375FHW DNA False 2018-01-26 ENCODE 1, 2 ENCFF059NNP, ENCFF221GWS, ENCFF227IZS, ENCFF910IKB 2029772090 ENCODE Processing Pipeline ab5d16aaadff1f3f2990bdea6dce4904 https://www.encodeproject.org/files/ENCFF322YEU/@@download/ENCFF322YEU.bigWig GRCh38 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF273STT bed narrowPeak peaks ENCSR051OUX ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFATC3-human ENCAB375FHW DNA False 2018-01-26 ENCODE 1 ENCFF221GWS, ENCFF910IKB 6882638 ENCODE Processing Pipeline 95d9e23b835d223b8002319dfa025a19 https://www.encodeproject.org/files/ENCFF273STT/@@download/ENCFF273STT.bed.gz GRCh38 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF262CQY bed narrowPeak peaks ENCSR051OUX ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFATC3-human ENCAB375FHW DNA False 2018-01-26 ENCODE 2 ENCFF059NNP, ENCFF227IZS 6668760 ENCODE Processing Pipeline 75b9b66924524bbad3181392d72f648e https://www.encodeproject.org/files/ENCFF262CQY/@@download/ENCFF262CQY.bed.gz GRCh38 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF131JCR bed narrowPeak peaks ENCSR051OUX ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFATC3-human ENCAB375FHW DNA False 2018-01-26 ENCODE 1, 2 ENCFF059NNP, ENCFF221GWS, ENCFF227IZS, ENCFF910IKB 7214841 ENCODE Processing Pipeline 91ff8fe529d08af471500557a663f4cf https://www.encodeproject.org/files/ENCFF131JCR/@@download/ENCFF131JCR.bed.gz GRCh38 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF088IIA bigBed narrowPeak peaks ENCSR051OUX ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFATC3-human ENCAB375FHW DNA False 2018-01-26 ENCODE 1 ENCFF273STT 13029014 ENCODE Processing Pipeline 096478aeda094d662f70830582c58d09 https://www.encodeproject.org/files/ENCFF088IIA/@@download/ENCFF088IIA.bigBed GRCh38 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF052HZL bigBed narrowPeak peaks ENCSR051OUX ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFATC3-human ENCAB375FHW DNA False 2018-01-26 ENCODE 2 ENCFF262CQY 13220859 ENCODE Processing Pipeline ee7808caaedc458b114bf5521311d06f https://www.encodeproject.org/files/ENCFF052HZL/@@download/ENCFF052HZL.bigBed GRCh38 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF361MNY bigBed narrowPeak peaks ENCSR051OUX ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFATC3-human ENCAB375FHW DNA False 2018-01-26 ENCODE 1, 2 ENCFF131JCR 12903500 ENCODE Processing Pipeline fe26be0af468d714e8740235425a037c https://www.encodeproject.org/files/ENCFF361MNY/@@download/ENCFF361MNY.bigBed GRCh38 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF129NQC bed narrowPeak conservative idr thresholded peaks ENCSR051OUX ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFATC3-human ENCAB375FHW DNA False 2018-01-26 ENCODE 1, 2 ENCFF131JCR, ENCFF262CQY, ENCFF273STT, ENCFF419RSJ 183440 ENCODE Processing Pipeline 513309565c8fdd58deeb247622f98cf0 https://www.encodeproject.org/files/ENCFF129NQC/@@download/ENCFF129NQC.bed.gz GRCh38 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF240OKU bigBed narrowPeak conservative idr thresholded peaks ENCSR051OUX ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFATC3-human ENCAB375FHW DNA False 2018-01-26 ENCODE 1, 2 ENCFF129NQC 377499 ENCODE Processing Pipeline 2756c4700dfb496741fff3d4e153b453 https://www.encodeproject.org/files/ENCFF240OKU/@@download/ENCFF240OKU.bigBed GRCh38 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF430JFH bed narrowPeak optimal idr thresholded peaks ENCSR051OUX ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFATC3-human ENCAB375FHW DNA False 2018-01-26 ENCODE 1, 2 ENCFF131JCR, ENCFF262CQY, ENCFF273STT, ENCFF419RSJ 244558 ENCODE Processing Pipeline 8ae11d1153b850cad6bdd12c86ca6134 https://www.encodeproject.org/files/ENCFF430JFH/@@download/ENCFF430JFH.bed.gz GRCh38 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF280XTA bigBed narrowPeak optimal idr thresholded peaks ENCSR051OUX ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFATC3-human ENCAB375FHW DNA False 2018-01-26 ENCODE 1, 2 ENCFF430JFH 562270 ENCODE Processing Pipeline da58928a8909be995e616375c9ab0365 https://www.encodeproject.org/files/ENCFF280XTA/@@download/ENCFF280XTA.bigBed GRCh38 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF174QPI bigWig signal p-value ENCSR051OUX ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFATC3-human ENCAB375FHW DNA False 2018-01-26 ENCODE 2 ENCFF051LWI, ENCFF421LSY 955623516 ENCODE Processing Pipeline 915157618bf21537ae637769131cda8c https://www.encodeproject.org/files/ENCFF174QPI/@@download/ENCFF174QPI.bigWig hg19 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF192APL bigWig fold change over control ENCSR051OUX ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFATC3-human ENCAB375FHW DNA False 2018-01-26 ENCODE 2 ENCFF051LWI, ENCFF421LSY 1097621077 ENCODE Processing Pipeline b2b26bbc0f56af1c6b9412950cf3e524 https://www.encodeproject.org/files/ENCFF192APL/@@download/ENCFF192APL.bigWig hg19 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF631AZA bed narrowPeak peaks ENCSR051OUX ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFATC3-human ENCAB375FHW DNA False 2018-01-26 ENCODE 1, 2 ENCFF051LWI, ENCFF208FMF, ENCFF421LSY, ENCFF581ZJL 7218198 ENCODE Processing Pipeline 62e7b00cb9cfd781b29facac5ff13921 https://www.encodeproject.org/files/ENCFF631AZA/@@download/ENCFF631AZA.bed.gz hg19 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF358IAH bed narrowPeak conservative idr thresholded peaks ENCSR051OUX ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFATC3-human ENCAB375FHW DNA False 2018-01-26 ENCODE 1, 2 ENCFF001TDO, ENCFF596YYO, ENCFF607MDM, ENCFF631AZA 182711 ENCODE Processing Pipeline cf93b6843600dbba5a4b9bc2c5f63ad2 https://www.encodeproject.org/files/ENCFF358IAH/@@download/ENCFF358IAH.bed.gz hg19 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF596YYO bed narrowPeak peaks ENCSR051OUX ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFATC3-human ENCAB375FHW DNA False 2018-01-26 ENCODE 2 ENCFF051LWI, ENCFF421LSY 6691760 ENCODE Processing Pipeline 21e99697f4e8c0277093c77dc32879dc https://www.encodeproject.org/files/ENCFF596YYO/@@download/ENCFF596YYO.bed.gz hg19 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF607MDM bed narrowPeak peaks ENCSR051OUX ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFATC3-human ENCAB375FHW DNA False 2018-01-26 ENCODE 1 ENCFF208FMF, ENCFF581ZJL 6879508 ENCODE Processing Pipeline 745e46fe25c71f7f3cc3aeec874591ee https://www.encodeproject.org/files/ENCFF607MDM/@@download/ENCFF607MDM.bed.gz hg19 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF091XDO bigBed narrowPeak peaks ENCSR051OUX ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFATC3-human ENCAB375FHW DNA False 2018-01-26 ENCODE 1 ENCFF607MDM 13026851 ENCODE Processing Pipeline b0fe85a72b89b3a06ac3c2eb966aecb8 https://www.encodeproject.org/files/ENCFF091XDO/@@download/ENCFF091XDO.bigBed hg19 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF293BPQ bigBed narrowPeak peaks ENCSR051OUX ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFATC3-human ENCAB375FHW DNA False 2018-01-26 ENCODE 2 ENCFF596YYO 13227744 ENCODE Processing Pipeline c9059b21c6802c215f8e6652cb635114 https://www.encodeproject.org/files/ENCFF293BPQ/@@download/ENCFF293BPQ.bigBed hg19 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF601AZZ bigBed narrowPeak peaks ENCSR051OUX ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFATC3-human ENCAB375FHW DNA False 2018-01-26 ENCODE 1, 2 ENCFF631AZA 12900825 ENCODE Processing Pipeline 096c6afddf2afd9d32fc258d1a036897 https://www.encodeproject.org/files/ENCFF601AZZ/@@download/ENCFF601AZZ.bigBed hg19 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF723RSX bed narrowPeak optimal idr thresholded peaks ENCSR051OUX ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFATC3-human ENCAB375FHW DNA False 2018-01-26 ENCODE 1, 2 ENCFF001TDO, ENCFF596YYO, ENCFF607MDM, ENCFF631AZA 249584 ENCODE Processing Pipeline d4f82f8346e6cfaeeea5dffc52df893e https://www.encodeproject.org/files/ENCFF723RSX/@@download/ENCFF723RSX.bed.gz hg19 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF194PKX bigBed narrowPeak optimal idr thresholded peaks ENCSR051OUX ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFATC3-human ENCAB375FHW DNA False 2018-01-26 ENCODE 1, 2 ENCFF723RSX 567001 ENCODE Processing Pipeline 41ddcf9e901b2b2f9b5264b3365131d9 https://www.encodeproject.org/files/ENCFF194PKX/@@download/ENCFF194PKX.bigBed hg19 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF894LUM bigBed narrowPeak conservative idr thresholded peaks ENCSR051OUX ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFATC3-human ENCAB375FHW DNA False 2018-01-26 ENCODE 1, 2 ENCFF358IAH 453235 ENCODE Processing Pipeline a3c4a7982f9fd97eddc77410019ecd93 https://www.encodeproject.org/files/ENCFF894LUM/@@download/ENCFF894LUM.bigBed hg19 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF705WBN fastq reads ENCSR757IIU ChIP-seq EFO:0002067 K562 cell line Homo sapiens HMBOX1-human ENCAB262WBH DNA False 2016-03-30 ENCODE 1 1 50 single-ended 1537247195 Richard Myers, HAIB 68062d104616f659a491ee30b1a372fa SRA:SRR5339281 https://www.encodeproject.org/files/ENCFF705WBN/@@download/ENCFF705WBN.fastq.gz Illumina HiSeq 2000 /files/ENCFF400XMH/ released moderate library complexity severe bottlenecking ENCFF371FHT bigWig signal p-value ENCSR757IIU ChIP-seq EFO:0002067 K562 cell line Homo sapiens HMBOX1-human ENCAB262WBH DNA False 2016-03-30 ENCODE 1 ENCFF227XXD, ENCFF454QBD, ENCFF986BOM 928832349 ENCODE Processing Pipeline 3f795e95bf6ea4da5b1b103af2fc9807 https://www.encodeproject.org/files/ENCFF371FHT/@@download/ENCFF371FHT.bigWig hg19 released moderate library complexity severe bottlenecking ENCFF615AOC bigWig fold change over control ENCSR757IIU ChIP-seq EFO:0002067 K562 cell line Homo sapiens HMBOX1-human ENCAB262WBH DNA False 2016-03-30 ENCODE 1 ENCFF227XXD, ENCFF454QBD, ENCFF986BOM 780663123 ENCODE Processing Pipeline 45a4864ed94155e87981650ef0a28a12 https://www.encodeproject.org/files/ENCFF615AOC/@@download/ENCFF615AOC.bigWig hg19 released moderate library complexity severe bottlenecking ENCFF049PKJ fastq reads ENCSR757IIU ChIP-seq EFO:0002067 K562 cell line Homo sapiens HMBOX1-human ENCAB262WBH DNA False 2016-03-30 ENCODE 2 1 50 single-ended 1264689902 Richard Myers, HAIB ffd2de0b7ae4669dc517cda106247489 SRA:SRR5339280 https://www.encodeproject.org/files/ENCFF049PKJ/@@download/ENCFF049PKJ.fastq.gz Illumina HiSeq 2000 /files/ENCFF774EJH/ released moderate library complexity severe bottlenecking ENCFF475TEH bam unfiltered alignments ENCSR757IIU ChIP-seq EFO:0002067 K562 cell line Homo sapiens HMBOX1-human ENCAB262WBH DNA False 2016-03-30 ENCODE 1 50 ENCFF643CGH, ENCFF705WBN 1602610537 ENCODE Processing Pipeline 069cf388eb1708a94d81941d80ce11ef https://www.encodeproject.org/files/ENCFF475TEH/@@download/ENCFF475TEH.bam GRCh38 released moderate library complexity severe bottlenecking ENCFF797FVU bam alignments ENCSR757IIU ChIP-seq EFO:0002067 K562 cell line Homo sapiens HMBOX1-human ENCAB262WBH DNA False 2016-03-30 ENCODE 1 50 ENCFF643CGH, ENCFF705WBN 1172487039 ENCODE Processing Pipeline dcf2b8253ee40bc7c9ae000632dae3b8 https://www.encodeproject.org/files/ENCFF797FVU/@@download/ENCFF797FVU.bam GRCh38 released moderate library complexity severe bottlenecking ENCFF977KTE bigWig signal p-value ENCSR757IIU ChIP-seq EFO:0002067 K562 cell line Homo sapiens HMBOX1-human ENCAB262WBH DNA False 2016-03-30 ENCODE 1 ENCFF063BAN, ENCFF213VVQ, ENCFF797FVU 1012904130 ENCODE Processing Pipeline e4fee537b444c62b49c85a9fa270d572 https://www.encodeproject.org/files/ENCFF977KTE/@@download/ENCFF977KTE.bigWig GRCh38 released moderate library complexity severe bottlenecking ENCFF482NEN bigWig signal p-value ENCSR757IIU ChIP-seq EFO:0002067 K562 cell line Homo sapiens HMBOX1-human ENCAB262WBH DNA False 2016-03-30 ENCODE 2 ENCFF063BAN, ENCFF202BLM, ENCFF213VVQ 960389990 ENCODE Processing Pipeline bfabdbceb75cb9c89d06505d45196256 https://www.encodeproject.org/files/ENCFF482NEN/@@download/ENCFF482NEN.bigWig GRCh38 released moderate library complexity severe bottlenecking ENCFF047ZUW bigWig signal p-value ENCSR757IIU ChIP-seq EFO:0002067 K562 cell line Homo sapiens HMBOX1-human ENCAB262WBH DNA False 2016-03-30 ENCODE 1, 2 ENCFF063BAN, ENCFF202BLM, ENCFF213VVQ, ENCFF797FVU 1197709859 ENCODE Processing Pipeline b0815e19ceeb802de6aba4fab7c3c473 https://www.encodeproject.org/files/ENCFF047ZUW/@@download/ENCFF047ZUW.bigWig GRCh38 released moderate library complexity severe bottlenecking ENCFF306KZM bigWig fold change over control ENCSR757IIU ChIP-seq EFO:0002067 K562 cell line Homo sapiens HMBOX1-human ENCAB262WBH DNA False 2016-03-30 ENCODE 1 ENCFF063BAN, ENCFF213VVQ, ENCFF797FVU 778353855 ENCODE Processing Pipeline 5c807e97c47f3ee2d84b756e10ff8fd9 https://www.encodeproject.org/files/ENCFF306KZM/@@download/ENCFF306KZM.bigWig GRCh38 released moderate library complexity severe bottlenecking ENCFF902DYB bigWig fold change over control ENCSR757IIU ChIP-seq EFO:0002067 K562 cell line Homo sapiens HMBOX1-human ENCAB262WBH DNA False 2016-03-30 ENCODE 2 ENCFF063BAN, ENCFF202BLM, ENCFF213VVQ 789460599 ENCODE Processing Pipeline 8ef4f6419b51d17fb4ee43353a806617 https://www.encodeproject.org/files/ENCFF902DYB/@@download/ENCFF902DYB.bigWig GRCh38 released moderate library complexity severe bottlenecking ENCFF677HOP bigWig fold change over control ENCSR757IIU ChIP-seq EFO:0002067 K562 cell line Homo sapiens HMBOX1-human ENCAB262WBH DNA False 2016-03-30 ENCODE 1, 2 ENCFF063BAN, ENCFF202BLM, ENCFF213VVQ, ENCFF797FVU 1143595392 ENCODE Processing Pipeline 8bf3b2261cf991309e1dfb64638c70cd https://www.encodeproject.org/files/ENCFF677HOP/@@download/ENCFF677HOP.bigWig GRCh38 released moderate library complexity severe bottlenecking ENCFF034XAT bed narrowPeak peaks ENCSR757IIU ChIP-seq EFO:0002067 K562 cell line Homo sapiens HMBOX1-human ENCAB262WBH DNA False 2016-03-30 ENCODE 1 ENCFF063BAN, ENCFF213VVQ, ENCFF797FVU 6735210 ENCODE Processing Pipeline e6fb8b79b33ac42e1687fc8c2a64c085 https://www.encodeproject.org/files/ENCFF034XAT/@@download/ENCFF034XAT.bed.gz GRCh38 released moderate library complexity severe bottlenecking ENCFF009DGB bigBed narrowPeak peaks ENCSR757IIU ChIP-seq EFO:0002067 K562 cell line Homo sapiens HMBOX1-human ENCAB262WBH DNA False 2016-03-30 ENCODE 1 ENCFF034XAT 13035124 ENCODE Processing Pipeline 46ff283683c31908f7fbbf80b6830a66 https://www.encodeproject.org/files/ENCFF009DGB/@@download/ENCFF009DGB.bigBed GRCh38 released moderate library complexity severe bottlenecking ENCFF896YKO bam unfiltered alignments ENCSR757IIU ChIP-seq EFO:0002067 K562 cell line Homo sapiens HMBOX1-human ENCAB262WBH DNA False 2016-03-30 ENCODE 1 50 ENCFF705WBN, ENCFF807MUK 1598810750 ENCODE Processing Pipeline 42d843a008b55234795bfb71fba5fdc5 https://www.encodeproject.org/files/ENCFF896YKO/@@download/ENCFF896YKO.bam hg19 released moderate library complexity severe bottlenecking ENCFF099QLM bam unfiltered alignments ENCSR757IIU ChIP-seq EFO:0002067 K562 cell line Homo sapiens HMBOX1-human ENCAB262WBH DNA False 2016-03-30 ENCODE 2 50 ENCFF049PKJ, ENCFF807MUK 1586810927 ENCODE Processing Pipeline e9e8c621e893360cfcf2d88d51bbbd67 https://www.encodeproject.org/files/ENCFF099QLM/@@download/ENCFF099QLM.bam hg19 released moderate library complexity severe bottlenecking ENCFF392GEM bam alignments ENCSR757IIU ChIP-seq EFO:0002067 K562 cell line Homo sapiens HMBOX1-human ENCAB262WBH DNA False 2016-03-30 ENCODE 2 50 ENCFF049PKJ, ENCFF807MUK 1077868323 ENCODE Processing Pipeline 774cad206354fe047d5176c0b0ccec8e https://www.encodeproject.org/files/ENCFF392GEM/@@download/ENCFF392GEM.bam hg19 released moderate library complexity severe bottlenecking ENCFF986BOM bam alignments ENCSR757IIU ChIP-seq EFO:0002067 K562 cell line Homo sapiens HMBOX1-human ENCAB262WBH DNA False 2016-03-30 ENCODE 1 50 ENCFF705WBN, ENCFF807MUK 1173275706 ENCODE Processing Pipeline aa0684256da83e7371db3ac8fd227822 https://www.encodeproject.org/files/ENCFF986BOM/@@download/ENCFF986BOM.bam hg19 released moderate library complexity severe bottlenecking ENCFF678AVD bed narrowPeak peaks ENCSR757IIU ChIP-seq EFO:0002067 K562 cell line Homo sapiens HMBOX1-human ENCAB262WBH DNA False 2016-03-30 ENCODE 2 ENCFF063BAN, ENCFF202BLM, ENCFF213VVQ 6599752 ENCODE Processing Pipeline 43f8386b9e079217d0528038eb0f08c5 https://www.encodeproject.org/files/ENCFF678AVD/@@download/ENCFF678AVD.bed.gz GRCh38 released moderate library complexity severe bottlenecking ENCFF079HTI bed narrowPeak peaks ENCSR757IIU ChIP-seq EFO:0002067 K562 cell line Homo sapiens HMBOX1-human ENCAB262WBH DNA False 2016-03-30 ENCODE 1, 2 ENCFF063BAN, ENCFF202BLM, ENCFF213VVQ, ENCFF797FVU 7021816 ENCODE Processing Pipeline 05284c0723c4ea830f572b6823a293ca https://www.encodeproject.org/files/ENCFF079HTI/@@download/ENCFF079HTI.bed.gz GRCh38 released moderate library complexity severe bottlenecking ENCFF390ZUZ bigBed narrowPeak peaks ENCSR757IIU ChIP-seq EFO:0002067 K562 cell line Homo sapiens HMBOX1-human ENCAB262WBH DNA False 2016-03-30 ENCODE 2 ENCFF678AVD 13242361 ENCODE Processing Pipeline e2d721cf70c6c0883853779073e36db9 https://www.encodeproject.org/files/ENCFF390ZUZ/@@download/ENCFF390ZUZ.bigBed GRCh38 released moderate library complexity severe bottlenecking ENCFF107LLK bigBed narrowPeak peaks ENCSR757IIU ChIP-seq EFO:0002067 K562 cell line Homo sapiens HMBOX1-human ENCAB262WBH DNA False 2016-03-30 ENCODE 1, 2 ENCFF079HTI 13185690 ENCODE Processing Pipeline fda5860b1b6d0b4612ef83f30af17f99 https://www.encodeproject.org/files/ENCFF107LLK/@@download/ENCFF107LLK.bigBed GRCh38 released moderate library complexity severe bottlenecking ENCFF912CZG bed narrowPeak conservative idr thresholded peaks ENCSR757IIU ChIP-seq EFO:0002067 K562 cell line Homo sapiens HMBOX1-human ENCAB262WBH DNA False 2016-03-30 ENCODE 1, 2 ENCFF034XAT, ENCFF079HTI, ENCFF419RSJ, ENCFF678AVD 425372 ENCODE Processing Pipeline 066774c1505a15379be88e6cea295b07 https://www.encodeproject.org/files/ENCFF912CZG/@@download/ENCFF912CZG.bed.gz GRCh38 released moderate library complexity severe bottlenecking ENCFF545JRL bigBed narrowPeak conservative idr thresholded peaks ENCSR757IIU ChIP-seq EFO:0002067 K562 cell line Homo sapiens HMBOX1-human ENCAB262WBH DNA False 2016-03-30 ENCODE 1, 2 ENCFF912CZG 851113 ENCODE Processing Pipeline 9166f2eb3354ef626f500ead81fb9aac https://www.encodeproject.org/files/ENCFF545JRL/@@download/ENCFF545JRL.bigBed GRCh38 released moderate library complexity severe bottlenecking ENCFF718DFX bed narrowPeak optimal idr thresholded peaks ENCSR757IIU ChIP-seq EFO:0002067 K562 cell line Homo sapiens HMBOX1-human ENCAB262WBH DNA False 2016-03-30 ENCODE 1, 2 ENCFF034XAT, ENCFF079HTI, ENCFF419RSJ, ENCFF678AVD 513563 ENCODE Processing Pipeline bd4007ae01d0f255d400fec344b2c2e9 https://www.encodeproject.org/files/ENCFF718DFX/@@download/ENCFF718DFX.bed.gz GRCh38 released moderate library complexity severe bottlenecking ENCFF317JJX bigBed narrowPeak optimal idr thresholded peaks ENCSR757IIU ChIP-seq EFO:0002067 K562 cell line Homo sapiens HMBOX1-human ENCAB262WBH DNA False 2016-03-30 ENCODE 1, 2 ENCFF718DFX 981711 ENCODE Processing Pipeline f84257215634dae3572010f240ab6df2 https://www.encodeproject.org/files/ENCFF317JJX/@@download/ENCFF317JJX.bigBed GRCh38 released moderate library complexity severe bottlenecking ENCFF202BLM bam alignments ENCSR757IIU ChIP-seq EFO:0002067 K562 cell line Homo sapiens HMBOX1-human ENCAB262WBH DNA False 2016-03-30 ENCODE 2 50 ENCFF049PKJ, ENCFF643CGH 1077476746 ENCODE Processing Pipeline af75b092ea482b47232baa520cdee9fd https://www.encodeproject.org/files/ENCFF202BLM/@@download/ENCFF202BLM.bam GRCh38 released moderate library complexity severe bottlenecking ENCFF417ZUD bam unfiltered alignments ENCSR757IIU ChIP-seq EFO:0002067 K562 cell line Homo sapiens HMBOX1-human ENCAB262WBH DNA False 2016-03-30 ENCODE 2 50 ENCFF049PKJ, ENCFF807MUK 1410409245 ENCODE Processing Pipeline 4844aa82717cbfa527ffe7fe2107d4ee https://www.encodeproject.org/files/ENCFF417ZUD/@@download/ENCFF417ZUD.bam hg19 released moderate library complexity severe bottlenecking ENCFF671VUD bam unfiltered alignments ENCSR757IIU ChIP-seq EFO:0002067 K562 cell line Homo sapiens HMBOX1-human ENCAB262WBH DNA False 2016-03-30 ENCODE 2 50 ENCFF049PKJ, ENCFF643CGH 1415826214 ENCODE Processing Pipeline 6d6511257a005a4d3999eb35421aba65 https://www.encodeproject.org/files/ENCFF671VUD/@@download/ENCFF671VUD.bam GRCh38 released moderate library complexity severe bottlenecking ENCFF225PIB bam alignments ENCSR757IIU ChIP-seq EFO:0002067 K562 cell line Homo sapiens HMBOX1-human ENCAB262WBH DNA False 2016-03-30 ENCODE 2 50 ENCFF049PKJ, ENCFF807MUK 1077868308 ENCODE Processing Pipeline bb6fd225d050e728ea04ed2e28372a81 https://www.encodeproject.org/files/ENCFF225PIB/@@download/ENCFF225PIB.bam hg19 released moderate library complexity severe bottlenecking ENCFF037FVZ bed narrowPeak peaks ENCSR757IIU ChIP-seq EFO:0002067 K562 cell line Homo sapiens HMBOX1-human ENCAB262WBH DNA False 2016-03-30 ENCODE 1, 2 ENCFF225PIB, ENCFF227XXD, ENCFF454QBD, ENCFF986BOM 7031469 ENCODE Processing Pipeline feb220c189b97d59af29b24ea583b4fe https://www.encodeproject.org/files/ENCFF037FVZ/@@download/ENCFF037FVZ.bed.gz hg19 released moderate library complexity severe bottlenecking ENCFF635OWB bigWig signal p-value ENCSR757IIU ChIP-seq EFO:0002067 K562 cell line Homo sapiens HMBOX1-human ENCAB262WBH DNA False 2016-03-30 ENCODE 2 ENCFF225PIB, ENCFF227XXD, ENCFF454QBD 921703384 ENCODE Processing Pipeline db35f3286effc145de2a9830a1508e5d https://www.encodeproject.org/files/ENCFF635OWB/@@download/ENCFF635OWB.bigWig hg19 released moderate library complexity severe bottlenecking ENCFF528UCI bigWig signal p-value ENCSR757IIU ChIP-seq EFO:0002067 K562 cell line Homo sapiens HMBOX1-human ENCAB262WBH DNA False 2016-03-30 ENCODE 1, 2 ENCFF225PIB, ENCFF227XXD, ENCFF454QBD, ENCFF986BOM 1060346693 ENCODE Processing Pipeline 2ae1a36e677882813fdb25a3bd3d4264 https://www.encodeproject.org/files/ENCFF528UCI/@@download/ENCFF528UCI.bigWig hg19 released moderate library complexity severe bottlenecking ENCFF160OZE bigWig fold change over control ENCSR757IIU ChIP-seq EFO:0002067 K562 cell line Homo sapiens HMBOX1-human ENCAB262WBH DNA False 2016-03-30 ENCODE 2 ENCFF225PIB, ENCFF227XXD, ENCFF454QBD 787139477 ENCODE Processing Pipeline 910ee2aa263fff8cc0a82aa814124af1 https://www.encodeproject.org/files/ENCFF160OZE/@@download/ENCFF160OZE.bigWig hg19 released moderate library complexity severe bottlenecking ENCFF614EKZ bigWig fold change over control ENCSR757IIU ChIP-seq EFO:0002067 K562 cell line Homo sapiens HMBOX1-human ENCAB262WBH DNA False 2016-03-30 ENCODE 1, 2 ENCFF225PIB, ENCFF227XXD, ENCFF454QBD, ENCFF986BOM 1191277090 ENCODE Processing Pipeline 898c57514a1dec8c7277198164bc3ea3 https://www.encodeproject.org/files/ENCFF614EKZ/@@download/ENCFF614EKZ.bigWig hg19 released moderate library complexity severe bottlenecking ENCFF052IOC bed narrowPeak peaks ENCSR757IIU ChIP-seq EFO:0002067 K562 cell line Homo sapiens HMBOX1-human ENCAB262WBH DNA False 2016-03-30 ENCODE 1 ENCFF227XXD, ENCFF454QBD, ENCFF986BOM 6746160 ENCODE Processing Pipeline bd04ead3bc991eac41605e6d188659e2 https://www.encodeproject.org/files/ENCFF052IOC/@@download/ENCFF052IOC.bed.gz hg19 released moderate library complexity severe bottlenecking ENCFF514IDT bed narrowPeak peaks ENCSR757IIU ChIP-seq EFO:0002067 K562 cell line Homo sapiens HMBOX1-human ENCAB262WBH DNA False 2016-03-30 ENCODE 2 ENCFF225PIB, ENCFF227XXD, ENCFF454QBD 6597708 ENCODE Processing Pipeline a21edc00eb3fd7ccf328b299898d43ae https://www.encodeproject.org/files/ENCFF514IDT/@@download/ENCFF514IDT.bed.gz hg19 released moderate library complexity severe bottlenecking ENCFF491WIY bigBed narrowPeak peaks ENCSR757IIU ChIP-seq EFO:0002067 K562 cell line Homo sapiens HMBOX1-human ENCAB262WBH DNA False 2016-03-30 ENCODE 1 ENCFF052IOC 13030598 ENCODE Processing Pipeline 3fe7b722fb92a848f925e5f6c73bce8a https://www.encodeproject.org/files/ENCFF491WIY/@@download/ENCFF491WIY.bigBed hg19 released moderate library complexity severe bottlenecking ENCFF892CNV bigBed narrowPeak peaks ENCSR757IIU ChIP-seq EFO:0002067 K562 cell line Homo sapiens HMBOX1-human ENCAB262WBH DNA False 2016-03-30 ENCODE 2 ENCFF514IDT 13233949 ENCODE Processing Pipeline f8865a9261a95b5c177ae316360eafcc https://www.encodeproject.org/files/ENCFF892CNV/@@download/ENCFF892CNV.bigBed hg19 released moderate library complexity severe bottlenecking ENCFF998JIP bigBed narrowPeak peaks ENCSR757IIU ChIP-seq EFO:0002067 K562 cell line Homo sapiens HMBOX1-human ENCAB262WBH DNA False 2016-03-30 ENCODE 1, 2 ENCFF037FVZ 13193515 ENCODE Processing Pipeline a396a2ddc1951db633f78202e7c8de39 https://www.encodeproject.org/files/ENCFF998JIP/@@download/ENCFF998JIP.bigBed hg19 released moderate library complexity severe bottlenecking ENCFF829KBM bed narrowPeak conservative idr thresholded peaks ENCSR757IIU ChIP-seq EFO:0002067 K562 cell line Homo sapiens HMBOX1-human ENCAB262WBH DNA False 2016-03-30 ENCODE 1, 2 ENCFF001TDO, ENCFF037FVZ, ENCFF052IOC, ENCFF514IDT 425262 ENCODE Processing Pipeline 37a322022254c65d6e7c7f996f3dd4ff https://www.encodeproject.org/files/ENCFF829KBM/@@download/ENCFF829KBM.bed.gz hg19 released moderate library complexity severe bottlenecking ENCFF732WDZ bigBed narrowPeak conservative idr thresholded peaks ENCSR757IIU ChIP-seq EFO:0002067 K562 cell line Homo sapiens HMBOX1-human ENCAB262WBH DNA False 2016-03-30 ENCODE 1, 2 ENCFF829KBM 851861 ENCODE Processing Pipeline fd59215cfa450efa251402fa4915bf83 https://www.encodeproject.org/files/ENCFF732WDZ/@@download/ENCFF732WDZ.bigBed hg19 released moderate library complexity severe bottlenecking ENCFF569SHP bigBed narrowPeak optimal idr thresholded peaks ENCSR757IIU ChIP-seq EFO:0002067 K562 cell line Homo sapiens HMBOX1-human ENCAB262WBH DNA False 2016-03-30 ENCODE 1, 2 ENCFF558DSF 972908 ENCODE Processing Pipeline 3d83f5971cb4d32c0e236a9a5b72166e https://www.encodeproject.org/files/ENCFF569SHP/@@download/ENCFF569SHP.bigBed hg19 released moderate library complexity severe bottlenecking ENCFF558DSF bed narrowPeak optimal idr thresholded peaks ENCSR757IIU ChIP-seq EFO:0002067 K562 cell line Homo sapiens HMBOX1-human ENCAB262WBH DNA False 2016-03-30 ENCODE 1, 2 ENCFF001TDO, ENCFF037FVZ, ENCFF052IOC, ENCFF514IDT 507490 ENCODE Processing Pipeline 082127ee84bc475cf8b8969343b39cd0 https://www.encodeproject.org/files/ENCFF558DSF/@@download/ENCFF558DSF.bed.gz hg19 released moderate library complexity severe bottlenecking ENCFF168RUF bam unfiltered alignments ENCSR854MCV ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-IRF1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1 100 ENCFF031RWN, ENCFF031WIT, ENCFF807MUK 5157204413 ENCODE Processing Pipeline 8f28748b0bb800e510def4c38f734e5d https://www.encodeproject.org/files/ENCFF168RUF/@@download/ENCFF168RUF.bam hg19 released borderline replicate concordance, missing genetic modification characterization, mild to moderate bottlenecking, low read depth, moderate library complexity ENCFF258EEK bam unfiltered alignments ENCSR854MCV ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-IRF1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 2 100 ENCFF071PWE, ENCFF602NSL, ENCFF807MUK 4691950552 ENCODE Processing Pipeline 74f4a074cca09c9321eeb1600969875b https://www.encodeproject.org/files/ENCFF258EEK/@@download/ENCFF258EEK.bam hg19 released borderline replicate concordance, missing genetic modification characterization, mild to moderate bottlenecking, low read depth, moderate library complexity ENCFF031RWN fastq reads ENCSR854MCV ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-IRF1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1 1 100 paired-ended 1 ENCFF031WIT 2377990939 Michael Snyder, Stanford 721be130b03936f1a65ce1f46c02a6ce SRA:SRR5112158 https://www.encodeproject.org/files/ENCFF031RWN/@@download/ENCFF031RWN.fastq.gz Illumina HiSeq 2000 /files/ENCFF285JYI/ released borderline replicate concordance, missing genetic modification characterization, mild to moderate bottlenecking, low read depth, moderate library complexity ENCFF031WIT fastq reads ENCSR854MCV ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-IRF1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1 1 100 paired-ended 2 ENCFF031RWN 2381568938 Michael Snyder, Stanford a33e7ae6e44bfec5645cefa9e75d0469 SRA:SRR5112158 https://www.encodeproject.org/files/ENCFF031WIT/@@download/ENCFF031WIT.fastq.gz Illumina HiSeq 2000 /files/ENCFF420KFM/ released borderline replicate concordance, missing genetic modification characterization, mild to moderate bottlenecking, low read depth, moderate library complexity ENCFF602NSL fastq reads ENCSR854MCV ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-IRF1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 2 1 100 paired-ended 1 ENCFF071PWE 2230031642 Michael Snyder, Stanford 7cf636d0ec7665659129fcc278c8fb4f SRA:SRR5112159 https://www.encodeproject.org/files/ENCFF602NSL/@@download/ENCFF602NSL.fastq.gz Illumina HiSeq 2000 /files/ENCFF285JYI/ released borderline replicate concordance, missing genetic modification characterization, mild to moderate bottlenecking, low read depth, moderate library complexity ENCFF071PWE fastq reads ENCSR854MCV ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-IRF1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 2 1 100 paired-ended 2 ENCFF602NSL 2232655074 Michael Snyder, Stanford ce7af8260b3d179bed89bf18f4de75f7 SRA:SRR5112159 https://www.encodeproject.org/files/ENCFF071PWE/@@download/ENCFF071PWE.fastq.gz Illumina HiSeq 2000 /files/ENCFF420KFM/ released borderline replicate concordance, missing genetic modification characterization, mild to moderate bottlenecking, low read depth, moderate library complexity ENCFF602FUW bam alignments ENCSR854MCV ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-IRF1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 2 100 ENCFF071PWE, ENCFF602NSL, ENCFF807MUK 3229198483 ENCODE Processing Pipeline 292f7bf8147f95924578bee182d7deb0 https://www.encodeproject.org/files/ENCFF602FUW/@@download/ENCFF602FUW.bam hg19 released borderline replicate concordance, missing genetic modification characterization, mild to moderate bottlenecking, low read depth, moderate library complexity ENCFF559EGU bam alignments ENCSR854MCV ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-IRF1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1 100 ENCFF031RWN, ENCFF031WIT, ENCFF807MUK 4188110604 ENCODE Processing Pipeline 4104474b5a57c8e3b27a507c41c7b2f0 https://www.encodeproject.org/files/ENCFF559EGU/@@download/ENCFF559EGU.bam hg19 released borderline replicate concordance, missing genetic modification characterization, mild to moderate bottlenecking, low read depth, moderate library complexity ENCFF876NQO bigWig signal p-value ENCSR854MCV ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-IRF1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1 ENCFF181PST, ENCFF559EGU 1163579004 ENCODE Processing Pipeline 8b6fb16ddd9f49b58dcc74f7d31ee0b1 https://www.encodeproject.org/files/ENCFF876NQO/@@download/ENCFF876NQO.bigWig hg19 released borderline replicate concordance, missing genetic modification characterization, mild to moderate bottlenecking, low read depth, moderate library complexity ENCFF139HRS bigWig signal p-value ENCSR854MCV ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-IRF1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 2 ENCFF181PST, ENCFF602FUW 866178607 ENCODE Processing Pipeline de9e6fedf2fc6e72136749d21288b61f https://www.encodeproject.org/files/ENCFF139HRS/@@download/ENCFF139HRS.bigWig hg19 released borderline replicate concordance, missing genetic modification characterization, mild to moderate bottlenecking, low read depth, moderate library complexity ENCFF732CQW bigWig signal p-value ENCSR854MCV ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-IRF1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF181PST, ENCFF559EGU, ENCFF602FUW 1334410645 ENCODE Processing Pipeline 985462d51a4684a1db97bf1c7c4525b9 https://www.encodeproject.org/files/ENCFF732CQW/@@download/ENCFF732CQW.bigWig hg19 released borderline replicate concordance, missing genetic modification characterization, mild to moderate bottlenecking, low read depth, moderate library complexity ENCFF722EJM bigWig fold change over control ENCSR854MCV ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-IRF1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1 ENCFF181PST, ENCFF559EGU 1133095059 ENCODE Processing Pipeline 16d305f8c59e63e8951c6c2eb61c12d7 https://www.encodeproject.org/files/ENCFF722EJM/@@download/ENCFF722EJM.bigWig hg19 released borderline replicate concordance, missing genetic modification characterization, mild to moderate bottlenecking, low read depth, moderate library complexity ENCFF679CAA bigWig fold change over control ENCSR854MCV ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-IRF1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 2 ENCFF181PST, ENCFF602FUW 989030839 ENCODE Processing Pipeline 0239077c400b425f48de68bc0166f3a7 https://www.encodeproject.org/files/ENCFF679CAA/@@download/ENCFF679CAA.bigWig hg19 released borderline replicate concordance, missing genetic modification characterization, mild to moderate bottlenecking, low read depth, moderate library complexity ENCFF992YWK bigWig fold change over control ENCSR854MCV ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-IRF1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF181PST, ENCFF559EGU, ENCFF602FUW 1534982667 ENCODE Processing Pipeline 60453bc390f40ad4f9b0b05625658289 https://www.encodeproject.org/files/ENCFF992YWK/@@download/ENCFF992YWK.bigWig hg19 released borderline replicate concordance, missing genetic modification characterization, mild to moderate bottlenecking, low read depth, moderate library complexity ENCFF961ADP bed narrowPeak peaks ENCSR854MCV ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-IRF1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1 ENCFF181PST, ENCFF559EGU 7002170 ENCODE Processing Pipeline 6ece835dcbdf4828c1f339abadab621f https://www.encodeproject.org/files/ENCFF961ADP/@@download/ENCFF961ADP.bed.gz hg19 released borderline replicate concordance, missing genetic modification characterization, mild to moderate bottlenecking, low read depth, moderate library complexity ENCFF177SSM bigBed narrowPeak peaks ENCSR854MCV ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-IRF1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1 ENCFF961ADP 13079336 ENCODE Processing Pipeline 8af35796c38fc16dd4538f0fa62f6874 https://www.encodeproject.org/files/ENCFF177SSM/@@download/ENCFF177SSM.bigBed hg19 released borderline replicate concordance, missing genetic modification characterization, mild to moderate bottlenecking, low read depth, moderate library complexity ENCFF857RCJ bed narrowPeak peaks ENCSR854MCV ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-IRF1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF181PST, ENCFF559EGU, ENCFF602FUW 7224900 ENCODE Processing Pipeline 54181619aa6c737d06304a79dfb147f5 https://www.encodeproject.org/files/ENCFF857RCJ/@@download/ENCFF857RCJ.bed.gz hg19 released borderline replicate concordance, missing genetic modification characterization, mild to moderate bottlenecking, low read depth, moderate library complexity ENCFF597NAA bigBed narrowPeak peaks ENCSR854MCV ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-IRF1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 2 ENCFF814SES 13337350 ENCODE Processing Pipeline 9073dd1b19ca1577415d0bb7d6ff42a4 https://www.encodeproject.org/files/ENCFF597NAA/@@download/ENCFF597NAA.bigBed hg19 released borderline replicate concordance, missing genetic modification characterization, mild to moderate bottlenecking, low read depth, moderate library complexity ENCFF814SES bed narrowPeak peaks ENCSR854MCV ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-IRF1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 2 ENCFF181PST, ENCFF602FUW 6403721 ENCODE Processing Pipeline adcbd23aff63735c0557f15b852f6b3c https://www.encodeproject.org/files/ENCFF814SES/@@download/ENCFF814SES.bed.gz hg19 released borderline replicate concordance, missing genetic modification characterization, mild to moderate bottlenecking, low read depth, moderate library complexity ENCFF345OVQ bigBed narrowPeak peaks ENCSR854MCV ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-IRF1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF857RCJ 13068081 ENCODE Processing Pipeline fd0c7a53ebe604e69543aef9822b3632 https://www.encodeproject.org/files/ENCFF345OVQ/@@download/ENCFF345OVQ.bigBed hg19 released borderline replicate concordance, missing genetic modification characterization, mild to moderate bottlenecking, low read depth, moderate library complexity ENCFF561XXS bam unfiltered alignments ENCSR854MCV ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-IRF1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 2 100 ENCFF071PWE, ENCFF602NSL, ENCFF643CGH 4697281378 ENCODE Processing Pipeline 2554a40e9b663f2477094b42ccf872c3 https://www.encodeproject.org/files/ENCFF561XXS/@@download/ENCFF561XXS.bam GRCh38 released borderline replicate concordance, missing genetic modification characterization, mild to moderate bottlenecking, low read depth, moderate library complexity ENCFF162RPJ bam unfiltered alignments ENCSR854MCV ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-IRF1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1 100 ENCFF031RWN, ENCFF031WIT, ENCFF643CGH 5165721872 ENCODE Processing Pipeline 059551d973804009e2c163ea0fe04b60 https://www.encodeproject.org/files/ENCFF162RPJ/@@download/ENCFF162RPJ.bam GRCh38 released borderline replicate concordance, missing genetic modification characterization, mild to moderate bottlenecking, low read depth, moderate library complexity ENCFF922JWO bam alignments ENCSR854MCV ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-IRF1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 2 100 ENCFF071PWE, ENCFF602NSL, ENCFF643CGH 3231598909 ENCODE Processing Pipeline 7433bf237c54671efc372cffb2b7d98a https://www.encodeproject.org/files/ENCFF922JWO/@@download/ENCFF922JWO.bam GRCh38 released borderline replicate concordance, missing genetic modification characterization, mild to moderate bottlenecking, low read depth, moderate library complexity ENCFF701KAF bam alignments ENCSR854MCV ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-IRF1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1 100 ENCFF031RWN, ENCFF031WIT, ENCFF643CGH 4190431613 ENCODE Processing Pipeline ca8a5b3559cf494f078701b0d3ece52a https://www.encodeproject.org/files/ENCFF701KAF/@@download/ENCFF701KAF.bam GRCh38 released borderline replicate concordance, missing genetic modification characterization, mild to moderate bottlenecking, low read depth, moderate library complexity ENCFF814IGR bigWig signal p-value ENCSR854MCV ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-IRF1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1 ENCFF243UPF, ENCFF701KAF 1104258762 ENCODE Processing Pipeline f76225048efc5c588931514b7c25c2ba https://www.encodeproject.org/files/ENCFF814IGR/@@download/ENCFF814IGR.bigWig GRCh38 released borderline replicate concordance, missing genetic modification characterization, mild to moderate bottlenecking, low read depth, moderate library complexity ENCFF841DRS bigWig signal p-value ENCSR854MCV ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-IRF1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 2 ENCFF243UPF, ENCFF922JWO 874121301 ENCODE Processing Pipeline 8b2e8da937924585c04aaad9363a82cc https://www.encodeproject.org/files/ENCFF841DRS/@@download/ENCFF841DRS.bigWig GRCh38 released borderline replicate concordance, missing genetic modification characterization, mild to moderate bottlenecking, low read depth, moderate library complexity ENCFF948ZHL bigWig signal p-value ENCSR854MCV ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-IRF1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF243UPF, ENCFF701KAF, ENCFF922JWO 1335049511 ENCODE Processing Pipeline 67b5794f48030c4d40be1070142b6671 https://www.encodeproject.org/files/ENCFF948ZHL/@@download/ENCFF948ZHL.bigWig GRCh38 released borderline replicate concordance, missing genetic modification characterization, mild to moderate bottlenecking, low read depth, moderate library complexity ENCFF956LZN bigWig fold change over control ENCSR854MCV ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-IRF1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1 ENCFF243UPF, ENCFF701KAF 1141040470 ENCODE Processing Pipeline 8044fdb92ce6adf3009dc24ed4559e1e https://www.encodeproject.org/files/ENCFF956LZN/@@download/ENCFF956LZN.bigWig GRCh38 released borderline replicate concordance, missing genetic modification characterization, mild to moderate bottlenecking, low read depth, moderate library complexity ENCFF134SNJ bigWig fold change over control ENCSR854MCV ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-IRF1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 2 ENCFF243UPF, ENCFF922JWO 989020490 ENCODE Processing Pipeline 6420edc2cdb9b1fa4056f232c98f7889 https://www.encodeproject.org/files/ENCFF134SNJ/@@download/ENCFF134SNJ.bigWig GRCh38 released borderline replicate concordance, missing genetic modification characterization, mild to moderate bottlenecking, low read depth, moderate library complexity ENCFF630FXX bigWig fold change over control ENCSR854MCV ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-IRF1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF243UPF, ENCFF701KAF, ENCFF922JWO 1536287456 ENCODE Processing Pipeline 6aeb4cf7738a9a5de3774b72fd902d67 https://www.encodeproject.org/files/ENCFF630FXX/@@download/ENCFF630FXX.bigWig GRCh38 released borderline replicate concordance, missing genetic modification characterization, mild to moderate bottlenecking, low read depth, moderate library complexity ENCFF473FJI bed narrowPeak peaks ENCSR854MCV ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-IRF1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1 ENCFF243UPF, ENCFF701KAF 6927190 ENCODE Processing Pipeline 65d00adfe73f5ddf5450c8937d913ec3 https://www.encodeproject.org/files/ENCFF473FJI/@@download/ENCFF473FJI.bed.gz GRCh38 released borderline replicate concordance, missing genetic modification characterization, mild to moderate bottlenecking, low read depth, moderate library complexity ENCFF497BUE bed narrowPeak peaks ENCSR854MCV ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-IRF1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 2 ENCFF243UPF, ENCFF922JWO 6263965 ENCODE Processing Pipeline bbfd8520e9d478f8c05d7c6a1e2ed665 https://www.encodeproject.org/files/ENCFF497BUE/@@download/ENCFF497BUE.bed.gz GRCh38 released borderline replicate concordance, missing genetic modification characterization, mild to moderate bottlenecking, low read depth, moderate library complexity ENCFF367SQU bed narrowPeak peaks ENCSR854MCV ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-IRF1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF243UPF, ENCFF701KAF, ENCFF922JWO 7185007 ENCODE Processing Pipeline 4be035025e8e07a8a87e686bccb7e86d https://www.encodeproject.org/files/ENCFF367SQU/@@download/ENCFF367SQU.bed.gz GRCh38 released borderline replicate concordance, missing genetic modification characterization, mild to moderate bottlenecking, low read depth, moderate library complexity ENCFF826VDX bigBed narrowPeak peaks ENCSR854MCV ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-IRF1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1 ENCFF473FJI 13091080 ENCODE Processing Pipeline 411b5e60e822d3d1e9851f81080c66d1 https://www.encodeproject.org/files/ENCFF826VDX/@@download/ENCFF826VDX.bigBed GRCh38 released borderline replicate concordance, missing genetic modification characterization, mild to moderate bottlenecking, low read depth, moderate library complexity ENCFF117XNB bigBed narrowPeak peaks ENCSR854MCV ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-IRF1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 2 ENCFF497BUE 13344735 ENCODE Processing Pipeline b2025e4d6bf0d58258a6acd7403a02dc https://www.encodeproject.org/files/ENCFF117XNB/@@download/ENCFF117XNB.bigBed GRCh38 released borderline replicate concordance, missing genetic modification characterization, mild to moderate bottlenecking, low read depth, moderate library complexity ENCFF563DFG bigBed narrowPeak peaks ENCSR854MCV ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-IRF1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF367SQU 13075622 ENCODE Processing Pipeline 172dea9440136fabb09cc030a751b507 https://www.encodeproject.org/files/ENCFF563DFG/@@download/ENCFF563DFG.bigBed GRCh38 released borderline replicate concordance, missing genetic modification characterization, mild to moderate bottlenecking, low read depth, moderate library complexity ENCFF251ZSJ bed narrowPeak conservative idr thresholded peaks ENCSR854MCV ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-IRF1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF367SQU, ENCFF419RSJ, ENCFF473FJI, ENCFF497BUE 206360 ENCODE Processing Pipeline c919cc6810dc7324655e518b9f096c61 https://www.encodeproject.org/files/ENCFF251ZSJ/@@download/ENCFF251ZSJ.bed.gz GRCh38 released borderline replicate concordance, missing genetic modification characterization, mild to moderate bottlenecking, low read depth, moderate library complexity ENCFF203LRV bed narrowPeak optimal idr thresholded peaks ENCSR854MCV ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-IRF1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF367SQU, ENCFF419RSJ, ENCFF473FJI, ENCFF497BUE 326196 ENCODE Processing Pipeline 12b2738402bccb1e62af49e3ce0ed95d https://www.encodeproject.org/files/ENCFF203LRV/@@download/ENCFF203LRV.bed.gz GRCh38 released borderline replicate concordance, missing genetic modification characterization, mild to moderate bottlenecking, low read depth, moderate library complexity ENCFF175VAF bigBed narrowPeak conservative idr thresholded peaks ENCSR854MCV ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-IRF1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF251ZSJ 470579 ENCODE Processing Pipeline be2051e47e57bf589017299fda3a1c38 https://www.encodeproject.org/files/ENCFF175VAF/@@download/ENCFF175VAF.bigBed GRCh38 released borderline replicate concordance, missing genetic modification characterization, mild to moderate bottlenecking, low read depth, moderate library complexity ENCFF027NQD bigBed narrowPeak optimal idr thresholded peaks ENCSR854MCV ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-IRF1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF203LRV 781937 ENCODE Processing Pipeline 451dfe744796ef4f5082ed8c2f275a30 https://www.encodeproject.org/files/ENCFF027NQD/@@download/ENCFF027NQD.bigBed GRCh38 released borderline replicate concordance, missing genetic modification characterization, mild to moderate bottlenecking, low read depth, moderate library complexity ENCFF470DUK bigBed narrowPeak conservative idr thresholded peaks ENCSR854MCV ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-IRF1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF372XLP 349530 ENCODE Processing Pipeline eb25d5a3251c21e5a5417cd81f65591f https://www.encodeproject.org/files/ENCFF470DUK/@@download/ENCFF470DUK.bigBed hg19 released borderline replicate concordance, missing genetic modification characterization, mild to moderate bottlenecking, low read depth, moderate library complexity ENCFF372XLP bed narrowPeak conservative idr thresholded peaks ENCSR854MCV ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-IRF1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF001TDO, ENCFF814SES, ENCFF857RCJ, ENCFF961ADP 176211 ENCODE Processing Pipeline ca85f4e90a52e224291c6f8884748547 https://www.encodeproject.org/files/ENCFF372XLP/@@download/ENCFF372XLP.bed.gz hg19 released borderline replicate concordance, missing genetic modification characterization, mild to moderate bottlenecking, low read depth, moderate library complexity ENCFF388AJH bed narrowPeak optimal idr thresholded peaks ENCSR854MCV ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-IRF1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF001TDO, ENCFF814SES, ENCFF857RCJ, ENCFF961ADP 272085 ENCODE Processing Pipeline 84c15f8be1f7b09a51e64536e6a6dd11 https://www.encodeproject.org/files/ENCFF388AJH/@@download/ENCFF388AJH.bed.gz hg19 released borderline replicate concordance, missing genetic modification characterization, mild to moderate bottlenecking, low read depth, moderate library complexity ENCFF931FBY bigBed narrowPeak optimal idr thresholded peaks ENCSR854MCV ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-IRF1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF388AJH 578404 ENCODE Processing Pipeline 55b1c8ff33351c72f74fd9cd1cc52276 https://www.encodeproject.org/files/ENCFF931FBY/@@download/ENCFF931FBY.bigBed hg19 released borderline replicate concordance, missing genetic modification characterization, mild to moderate bottlenecking, low read depth, moderate library complexity ENCFF000YIV bam alignments ENCSR000EZX ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour JUN-human ENCAB000AER DNA see document see document False 2011-10-29 ENCODE 2 ENCFF000YPD 750500628 Sherman Weissman, Yale 068c9dfdac46a48adfa15914236f4f65 https://www.encodeproject.org/files/ENCFF000YIV/@@download/ENCFF000YIV.bam hg19 archived control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF000YIW bam alignments ENCSR000EZX ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour JUN-human ENCAB000AER DNA see document see document False 2011-10-29 ENCODE 1 ENCFF000YPB 753808848 Sherman Weissman, Yale 2d85196f2b8ae99dafa4b5be13d59138 https://www.encodeproject.org/files/ENCFF000YIW/@@download/ENCFF000YIW.bam hg19 archived control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF000YIX bigBed narrowPeak peaks ENCSR000EZX ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour JUN-human ENCAB000AER DNA see document see document False 2011-10-29 ENCODE ENCFF001VML 147524 Sherman Weissman, Yale 65dde275739f7d85bfcd610cbd6404cc https://www.encodeproject.org/files/ENCFF000YIX/@@download/ENCFF000YIX.bigBed hg19 archived control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF000YIY bigWig signal ENCSR000EZX ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour JUN-human ENCAB000AER DNA see document see document False 2011-10-29 ENCODE 377609530 Sherman Weissman, Yale 4731f41ea882b97c5f11fca541b1b1ba https://www.encodeproject.org/files/ENCFF000YIY/@@download/ENCFF000YIY.bigWig hg19 archived control low read depth biological replicates with identical biosample, missing derived_from insufficient read length, insufficient read depth ENCFF000YPB fastq reads ENCSR000EZX ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour JUN-human ENCAB000AER DNA see document see document False 2011-10-29 ENCODE 1 1 27 single-ended 571921191 Sherman Weissman, Yale aa409af331c4d61ef33532f3e1fa015c https://www.encodeproject.org/files/ENCFF000YPB/@@download/ENCFF000YPB.fastq.gz Illumina Genome Analyzer /files/ENCFF000YPF/ released control low read depth, inconsistent control read length biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF000YPD fastq reads ENCSR000EZX ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour JUN-human ENCAB000AER DNA see document see document False 2011-10-29 ENCODE 2 1 27 single-ended 560329386 Sherman Weissman, Yale b529754e8aa20ec5c88e44464def032a https://www.encodeproject.org/files/ENCFF000YPD/@@download/ENCFF000YPD.fastq.gz Illumina Genome Analyzer /files/ENCFF000YPF/ released control low read depth, inconsistent control read length biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF001VML bed narrowPeak peaks ENCSR000EZX ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour JUN-human ENCAB000AER DNA see document see document False 2011-10-29 ENCODE 40087 Sherman Weissman, Yale 7e467221e96e897de9d5ee0f78142062 https://www.encodeproject.org/files/ENCFF001VML/@@download/ENCFF001VML.bed.gz hg19 archived control low read depth biological replicates with identical biosample, missing derived_from insufficient read length, insufficient read depth ENCFF002CVZ bed narrowPeak optimal idr thresholded peaks ENCSR000EZX ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour JUN-human ENCAB000AER DNA see document see document False 2011-10-29 ENCODE 127221 ENCODE Consortium Analysis Working Group 8086db1d6870a8c9418dacda7340d3a7 https://www.encodeproject.org/files/ENCFF002CVZ/@@download/ENCFF002CVZ.bed.gz hg19 archived control low read depth biological replicates with identical biosample, missing derived_from insufficient read length, insufficient read depth ENCFF223KPX bigBed narrowPeak optimal idr thresholded peaks ENCSR000EZX ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour JUN-human ENCAB000AER DNA see document see document False 2011-10-29 ENCODE ENCFF002CVZ 324594 ENCODE Consortium dd35f8868c30e8d42475c6134cc51e6c https://www.encodeproject.org/files/ENCFF223KPX/@@download/ENCFF223KPX.bigBed hg19 archived control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF573AFD bam alignments ENCSR000EZX ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour JUN-human ENCAB000AER DNA see document see document False 2011-10-29 ENCODE 1 27 ENCFF000YPB, ENCFF807MUK 316755688 ENCODE Processing Pipeline efdf0a88ac53a41e74580da63d6fd871 https://www.encodeproject.org/files/ENCFF573AFD/@@download/ENCFF573AFD.bam hg19 released control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF921WKF bam unfiltered alignments ENCSR000EZX ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour JUN-human ENCAB000AER DNA see document see document False 2011-10-29 ENCODE 1 27 ENCFF000YPB, ENCFF807MUK 754531565 ENCODE Processing Pipeline 074f81ab86b04c3131b868847f5bfa60 https://www.encodeproject.org/files/ENCFF921WKF/@@download/ENCFF921WKF.bam hg19 released control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF924WXS bam unfiltered alignments ENCSR000EZX ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour JUN-human ENCAB000AER DNA see document see document False 2011-10-29 ENCODE 2 27 ENCFF000YPD, ENCFF807MUK 751365268 ENCODE Processing Pipeline 177bc7a0e6674e50706e7c8039146668 https://www.encodeproject.org/files/ENCFF924WXS/@@download/ENCFF924WXS.bam hg19 released control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF780UCC bam unfiltered alignments ENCSR000EZX ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour JUN-human ENCAB000AER DNA see document see document False 2011-10-29 ENCODE 2 27 ENCFF000YPD, ENCFF643CGH 753840207 ENCODE Processing Pipeline 5973e6ef184a45be17b0314d9f3a7137 https://www.encodeproject.org/files/ENCFF780UCC/@@download/ENCFF780UCC.bam GRCh38 released control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF278VAK bam alignments ENCSR000EZX ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour JUN-human ENCAB000AER DNA see document see document False 2011-10-29 ENCODE 2 27 ENCFF000YPD, ENCFF807MUK 326296803 ENCODE Processing Pipeline 855ff33490dec4a0bbdeeb84b740385a https://www.encodeproject.org/files/ENCFF278VAK/@@download/ENCFF278VAK.bam hg19 released control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF206CUX bam unfiltered alignments ENCSR000EZX ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour JUN-human ENCAB000AER DNA see document see document False 2011-10-29 ENCODE 1 27 ENCFF000YPB, ENCFF643CGH 756890727 ENCODE Processing Pipeline 4f0bdf66d521917450f4b4be3fe59131 https://www.encodeproject.org/files/ENCFF206CUX/@@download/ENCFF206CUX.bam GRCh38 released control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF479JUJ bam alignments ENCSR000EZX ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour JUN-human ENCAB000AER DNA see document see document False 2011-10-29 ENCODE 2 27 ENCFF000YPD, ENCFF643CGH 325870408 ENCODE Processing Pipeline cdff2f6b917aa19b3b199ba769a42c49 https://www.encodeproject.org/files/ENCFF479JUJ/@@download/ENCFF479JUJ.bam GRCh38 released control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF643UCP bam alignments ENCSR000EZX ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour JUN-human ENCAB000AER DNA see document see document False 2011-10-29 ENCODE 1 27 ENCFF000YPB, ENCFF643CGH 316335022 ENCODE Processing Pipeline 012e4fcbecbddaf4e5e771617b3ccbd7 https://www.encodeproject.org/files/ENCFF643UCP/@@download/ENCFF643UCP.bam GRCh38 released control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF164RSZ bigWig signal p-value ENCSR000EZX ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour JUN-human ENCAB000AER DNA see document see document False 2011-10-29 ENCODE 2 ENCFF278VAK, ENCFF998GMZ 248759313 ENCODE Processing Pipeline 0e61f30f68782a87539380fdaac42371 https://www.encodeproject.org/files/ENCFF164RSZ/@@download/ENCFF164RSZ.bigWig hg19 released control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF222TAZ bigWig signal p-value ENCSR000EZX ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour JUN-human ENCAB000AER DNA see document see document False 2011-10-29 ENCODE 1 ENCFF332CUX, ENCFF643UCP 244170090 ENCODE Processing Pipeline a4a25fdae877351fd6ae6dc6681352e6 https://www.encodeproject.org/files/ENCFF222TAZ/@@download/ENCFF222TAZ.bigWig GRCh38 released control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF521FIU bigWig signal p-value ENCSR000EZX ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour JUN-human ENCAB000AER DNA see document see document False 2011-10-29 ENCODE 1 ENCFF573AFD, ENCFF998GMZ 244147012 ENCODE Processing Pipeline 178bcd7a1494e914f630d6954e4403db https://www.encodeproject.org/files/ENCFF521FIU/@@download/ENCFF521FIU.bigWig hg19 released control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF936EYE bigWig signal p-value ENCSR000EZX ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour JUN-human ENCAB000AER DNA see document see document False 2011-10-29 ENCODE 2 ENCFF332CUX, ENCFF479JUJ 247685960 ENCODE Processing Pipeline b7ebca8d61ddf915d6afe14616dc7607 https://www.encodeproject.org/files/ENCFF936EYE/@@download/ENCFF936EYE.bigWig GRCh38 released control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF471VRG bigWig signal p-value ENCSR000EZX ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour JUN-human ENCAB000AER DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF278VAK, ENCFF573AFD, ENCFF998GMZ 312642943 ENCODE Processing Pipeline 0749e7871998124ec45e799904cbce99 https://www.encodeproject.org/files/ENCFF471VRG/@@download/ENCFF471VRG.bigWig hg19 released control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF563IXZ bigWig fold change over control ENCSR000EZX ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour JUN-human ENCAB000AER DNA see document see document False 2011-10-29 ENCODE 1 ENCFF573AFD, ENCFF998GMZ 149195415 ENCODE Processing Pipeline 9fc3f2a51c675bcd35b29ae6ef3fc5c0 https://www.encodeproject.org/files/ENCFF563IXZ/@@download/ENCFF563IXZ.bigWig hg19 released control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF964PBT bigWig signal p-value ENCSR000EZX ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour JUN-human ENCAB000AER DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF332CUX, ENCFF479JUJ, ENCFF643UCP 313271598 ENCODE Processing Pipeline 722dd3329eadc807ef92741f7ff67eb9 https://www.encodeproject.org/files/ENCFF964PBT/@@download/ENCFF964PBT.bigWig GRCh38 released control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF890KNX bigWig fold change over control ENCSR000EZX ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour JUN-human ENCAB000AER DNA see document see document False 2011-10-29 ENCODE 1 ENCFF332CUX, ENCFF643UCP 150965641 ENCODE Processing Pipeline 103dd88f819972e385d5e30e8469a2bc https://www.encodeproject.org/files/ENCFF890KNX/@@download/ENCFF890KNX.bigWig GRCh38 released control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF086SNW bigWig fold change over control ENCSR000EZX ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour JUN-human ENCAB000AER DNA see document see document False 2011-10-29 ENCODE 2 ENCFF278VAK, ENCFF998GMZ 154972260 ENCODE Processing Pipeline 61c52c811c60c395c2537e306d079d1f https://www.encodeproject.org/files/ENCFF086SNW/@@download/ENCFF086SNW.bigWig hg19 released control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF876WNI bigWig fold change over control ENCSR000EZX ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour JUN-human ENCAB000AER DNA see document see document False 2011-10-29 ENCODE 2 ENCFF332CUX, ENCFF479JUJ 159478504 ENCODE Processing Pipeline c90eead81debb787bc8eb6fab0f20002 https://www.encodeproject.org/files/ENCFF876WNI/@@download/ENCFF876WNI.bigWig GRCh38 released control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF040RHL bigWig fold change over control ENCSR000EZX ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour JUN-human ENCAB000AER DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF332CUX, ENCFF479JUJ, ENCFF643UCP 275126619 ENCODE Processing Pipeline 757d683e6be41af322366c5c7796ca12 https://www.encodeproject.org/files/ENCFF040RHL/@@download/ENCFF040RHL.bigWig GRCh38 released control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF041POZ bed narrowPeak peaks ENCSR000EZX ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour JUN-human ENCAB000AER DNA see document see document False 2011-10-29 ENCODE 2 ENCFF278VAK, ENCFF998GMZ 2532916 ENCODE Processing Pipeline adf8683858265f42f5494538a255772b https://www.encodeproject.org/files/ENCFF041POZ/@@download/ENCFF041POZ.bed.gz hg19 released control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF930BTW bed narrowPeak peaks ENCSR000EZX ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour JUN-human ENCAB000AER DNA see document see document False 2011-10-29 ENCODE 1 ENCFF332CUX, ENCFF643UCP 2255268 ENCODE Processing Pipeline 99288f81d434c9ce6c578533335c1349 https://www.encodeproject.org/files/ENCFF930BTW/@@download/ENCFF930BTW.bed.gz GRCh38 released control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF288LTO bigWig fold change over control ENCSR000EZX ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour JUN-human ENCAB000AER DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF278VAK, ENCFF573AFD, ENCFF998GMZ 270856519 ENCODE Processing Pipeline afa2e5ac392d44060be1eddded3ac40a https://www.encodeproject.org/files/ENCFF288LTO/@@download/ENCFF288LTO.bigWig hg19 released control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF829NXG bed narrowPeak peaks ENCSR000EZX ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour JUN-human ENCAB000AER DNA see document see document False 2011-10-29 ENCODE 1 ENCFF573AFD, ENCFF998GMZ 2294461 ENCODE Processing Pipeline 3fe26a31a072923e0bb45a0d9b66931c https://www.encodeproject.org/files/ENCFF829NXG/@@download/ENCFF829NXG.bed.gz hg19 released control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF280ZZP bed narrowPeak peaks ENCSR000EZX ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour JUN-human ENCAB000AER DNA see document see document False 2011-10-29 ENCODE 2 ENCFF332CUX, ENCFF479JUJ 2519763 ENCODE Processing Pipeline fc18a979408a276e8afea3fed57bbbf0 https://www.encodeproject.org/files/ENCFF280ZZP/@@download/ENCFF280ZZP.bed.gz GRCh38 released control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF862SHH bed narrowPeak peaks ENCSR000EZX ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour JUN-human ENCAB000AER DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF332CUX, ENCFF479JUJ, ENCFF643UCP 4417992 ENCODE Processing Pipeline aae811a8393cd976142ffe82526b9e1e https://www.encodeproject.org/files/ENCFF862SHH/@@download/ENCFF862SHH.bed.gz GRCh38 released control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF950PCT bigBed narrowPeak peaks ENCSR000EZX ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour JUN-human ENCAB000AER DNA see document see document False 2011-10-29 ENCODE 1 ENCFF930BTW 4883197 ENCODE Processing Pipeline 6e8b22dd4de1810daa78d4dcb4caa3ce https://www.encodeproject.org/files/ENCFF950PCT/@@download/ENCFF950PCT.bigBed GRCh38 released control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF906HKG bigBed narrowPeak peaks ENCSR000EZX ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour JUN-human ENCAB000AER DNA see document see document False 2011-10-29 ENCODE 2 ENCFF041POZ 5290460 ENCODE Processing Pipeline 7e851377f21b4625407d00cbaf9ddc14 https://www.encodeproject.org/files/ENCFF906HKG/@@download/ENCFF906HKG.bigBed hg19 released control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF699EVP bigBed narrowPeak peaks ENCSR000EZX ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour JUN-human ENCAB000AER DNA see document see document False 2011-10-29 ENCODE 2 ENCFF280ZZP 5268837 ENCODE Processing Pipeline c8b7c9d60c4be4d04ece511715da1036 https://www.encodeproject.org/files/ENCFF699EVP/@@download/ENCFF699EVP.bigBed GRCh38 released control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF605EZB bed narrowPeak peaks ENCSR000EZX ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour JUN-human ENCAB000AER DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF278VAK, ENCFF573AFD, ENCFF998GMZ 4408438 ENCODE Processing Pipeline b063d9eb04e8363aae6bea84354936ef https://www.encodeproject.org/files/ENCFF605EZB/@@download/ENCFF605EZB.bed.gz hg19 released control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF053ZIX bigBed narrowPeak peaks ENCSR000EZX ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour JUN-human ENCAB000AER DNA see document see document False 2011-10-29 ENCODE 1 ENCFF829NXG 4891841 ENCODE Processing Pipeline c92f93ab82f868d1a76fc2cd51386d8c https://www.encodeproject.org/files/ENCFF053ZIX/@@download/ENCFF053ZIX.bigBed hg19 released control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF507HSS bigBed narrowPeak peaks ENCSR000EZX ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour JUN-human ENCAB000AER DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF862SHH 10629557 ENCODE Processing Pipeline 1292d161d5ce70b98f1001af5520bdba https://www.encodeproject.org/files/ENCFF507HSS/@@download/ENCFF507HSS.bigBed GRCh38 released control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF576HJU bigBed narrowPeak peaks ENCSR000EZX ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour JUN-human ENCAB000AER DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF605EZB 10622330 ENCODE Processing Pipeline 47fdfc98c43479a3d3d7cc1d1827101c https://www.encodeproject.org/files/ENCFF576HJU/@@download/ENCFF576HJU.bigBed hg19 released control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF952NFV bigBed narrowPeak conservative idr thresholded peaks ENCSR000EZX ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour JUN-human ENCAB000AER DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF893WBV 183378 ENCODE Processing Pipeline 2431b0aa75c6f8cd3138bbc3c6238ca1 https://www.encodeproject.org/files/ENCFF952NFV/@@download/ENCFF952NFV.bigBed hg19 released control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF893WBV bed narrowPeak conservative idr thresholded peaks ENCSR000EZX ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour JUN-human ENCAB000AER DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF001TDO, ENCFF041POZ, ENCFF605EZB, ENCFF829NXG 82401 ENCODE Processing Pipeline 2d14742f5c29fbcf0d4581e73d7c260d https://www.encodeproject.org/files/ENCFF893WBV/@@download/ENCFF893WBV.bed.gz hg19 released control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF385TGU bed narrowPeak conservative idr thresholded peaks ENCSR000EZX ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour JUN-human ENCAB000AER DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF280ZZP, ENCFF419RSJ, ENCFF862SHH, ENCFF930BTW 87491 ENCODE Processing Pipeline 275a50be81d82024d510faf668ec44f9 https://www.encodeproject.org/files/ENCFF385TGU/@@download/ENCFF385TGU.bed.gz GRCh38 released control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF360QAQ bigBed narrowPeak conservative idr thresholded peaks ENCSR000EZX ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour JUN-human ENCAB000AER DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF385TGU 190581 ENCODE Processing Pipeline cb5bba7d4da505d32902db17cf26a4bc https://www.encodeproject.org/files/ENCFF360QAQ/@@download/ENCFF360QAQ.bigBed GRCh38 released control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF573GQX bed narrowPeak optimal idr thresholded peaks ENCSR000EZX ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour JUN-human ENCAB000AER DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF001TDO, ENCFF041POZ, ENCFF605EZB, ENCFF829NXG 84349 ENCODE Processing Pipeline abed910a74ad73f3c1db21033f7275f3 https://www.encodeproject.org/files/ENCFF573GQX/@@download/ENCFF573GQX.bed.gz hg19 released control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF032UMW bed narrowPeak optimal idr thresholded peaks ENCSR000EZX ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour JUN-human ENCAB000AER DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF280ZZP, ENCFF419RSJ, ENCFF862SHH, ENCFF930BTW 90781 ENCODE Processing Pipeline fa444e84dbaab69ed24a22454f4b9bc9 https://www.encodeproject.org/files/ENCFF032UMW/@@download/ENCFF032UMW.bed.gz GRCh38 released control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF184IIH bigBed narrowPeak optimal idr thresholded peaks ENCSR000EZX ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour JUN-human ENCAB000AER DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF573GQX 186064 ENCODE Processing Pipeline bf8e22219d8eeeb231a76aca16431528 https://www.encodeproject.org/files/ENCFF184IIH/@@download/ENCFF184IIH.bigBed hg19 released control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF650TQK bigBed narrowPeak optimal idr thresholded peaks ENCSR000EZX ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour JUN-human ENCAB000AER DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF032UMW 194592 ENCODE Processing Pipeline 44ffee2ecc384ebd6d3082f17e168f99 https://www.encodeproject.org/files/ENCFF650TQK/@@download/ENCFF650TQK.bigBed GRCh38 released control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF848FDX fastq reads ENCSR996ESX ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFRKB-human ENCAB194SBI DNA False 2018-01-26 ENCODE 1 1 100 paired-ended 2 ENCFF185SQN 1774205111 Michael Snyder, Stanford fc13d89a70fc2ec4a55e34c198e37f21 https://www.encodeproject.org/files/ENCFF848FDX/@@download/ENCFF848FDX.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFF/ released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF185SQN fastq reads ENCSR996ESX ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFRKB-human ENCAB194SBI DNA False 2018-01-26 ENCODE 1 1 100 paired-ended 1 ENCFF848FDX 1765393433 Michael Snyder, Stanford 8dd065b0e5d6c408f5a9b8754b94f3f3 https://www.encodeproject.org/files/ENCFF185SQN/@@download/ENCFF185SQN.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFF/ released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF683NIW fastq reads ENCSR996ESX ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFRKB-human ENCAB194SBI DNA False 2018-01-26 ENCODE 2 1 100 paired-ended 1 ENCFF926JSG 2617353056 Michael Snyder, Stanford dedd3bb41c10697d1717693ae615944e https://www.encodeproject.org/files/ENCFF683NIW/@@download/ENCFF683NIW.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFD/ released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF926JSG fastq reads ENCSR996ESX ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFRKB-human ENCAB194SBI DNA False 2018-01-26 ENCODE 2 1 100 paired-ended 2 ENCFF683NIW 2677487479 Michael Snyder, Stanford f8eaeae1c6d9a82dd327b734a3c02d36 https://www.encodeproject.org/files/ENCFF926JSG/@@download/ENCFF926JSG.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFA/ released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF047FPB bam unfiltered alignments ENCSR996ESX ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFRKB-human ENCAB194SBI DNA False 2018-01-26 ENCODE 1 100 ENCFF185SQN, ENCFF643CGH, ENCFF848FDX 3904466067 ENCODE Processing Pipeline 22ecc31163063bab2491ad044f5e7281 https://www.encodeproject.org/files/ENCFF047FPB/@@download/ENCFF047FPB.bam GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF045OIY bam unfiltered alignments ENCSR996ESX ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFRKB-human ENCAB194SBI DNA False 2018-01-26 ENCODE 2 100 ENCFF643CGH, ENCFF683NIW, ENCFF926JSG 5623918430 ENCODE Processing Pipeline cf0dd6300c5df4ae3edf3099053ea46e https://www.encodeproject.org/files/ENCFF045OIY/@@download/ENCFF045OIY.bam GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF999WUJ bam unfiltered alignments ENCSR996ESX ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFRKB-human ENCAB194SBI DNA False 2018-01-26 ENCODE 1 100 ENCFF185SQN, ENCFF807MUK, ENCFF848FDX 3900824391 ENCODE Processing Pipeline 2bee232e2b149935bc9093892b25ef2a https://www.encodeproject.org/files/ENCFF999WUJ/@@download/ENCFF999WUJ.bam hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF903TVU bam alignments ENCSR996ESX ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFRKB-human ENCAB194SBI DNA False 2018-01-26 ENCODE 1 100 ENCFF185SQN, ENCFF643CGH, ENCFF848FDX 3157960667 ENCODE Processing Pipeline 1052f103eb7d1c7dbc5964e56f6ce758 https://www.encodeproject.org/files/ENCFF903TVU/@@download/ENCFF903TVU.bam GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF112SEL bam alignments ENCSR996ESX ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFRKB-human ENCAB194SBI DNA False 2018-01-26 ENCODE 2 100 ENCFF643CGH, ENCFF683NIW, ENCFF926JSG 4401758041 ENCODE Processing Pipeline 27920ec7ab9bf52e5e710ead583b7984 https://www.encodeproject.org/files/ENCFF112SEL/@@download/ENCFF112SEL.bam GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF965EQA bam unfiltered alignments ENCSR996ESX ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFRKB-human ENCAB194SBI DNA False 2018-01-26 ENCODE 2 100 ENCFF683NIW, ENCFF807MUK, ENCFF926JSG 5619088761 ENCODE Processing Pipeline 0fa1d0a346c5a58998247820d2d4cc04 https://www.encodeproject.org/files/ENCFF965EQA/@@download/ENCFF965EQA.bam hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF719VRZ bam alignments ENCSR996ESX ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFRKB-human ENCAB194SBI DNA False 2018-01-26 ENCODE 1 100 ENCFF185SQN, ENCFF807MUK, ENCFF848FDX 3156315242 ENCODE Processing Pipeline 7eea5bae872526e5e703cc45e5d5e66f https://www.encodeproject.org/files/ENCFF719VRZ/@@download/ENCFF719VRZ.bam hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF531EIP bam alignments ENCSR996ESX ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFRKB-human ENCAB194SBI DNA False 2018-01-26 ENCODE 2 100 ENCFF683NIW, ENCFF807MUK, ENCFF926JSG 4399151751 ENCODE Processing Pipeline 8341afadc1c8aab19792875e419b83be https://www.encodeproject.org/files/ENCFF531EIP/@@download/ENCFF531EIP.bam hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF808HOF bigWig signal p-value ENCSR996ESX ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFRKB-human ENCAB194SBI DNA False 2018-01-26 ENCODE 1 ENCFF581ZJL, ENCFF719VRZ 1043495345 ENCODE Processing Pipeline aa82a662bd96a4bc98b639ae833dcdaf https://www.encodeproject.org/files/ENCFF808HOF/@@download/ENCFF808HOF.bigWig hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF621KMP bigWig signal p-value ENCSR996ESX ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFRKB-human ENCAB194SBI DNA False 2018-01-26 ENCODE 2 ENCFF051LWI, ENCFF531EIP 1280586771 ENCODE Processing Pipeline 5bf13d1547739374ea4b159829589fae https://www.encodeproject.org/files/ENCFF621KMP/@@download/ENCFF621KMP.bigWig hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF048VBE bigWig fold change over control ENCSR996ESX ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFRKB-human ENCAB194SBI DNA False 2018-01-26 ENCODE 1 ENCFF581ZJL, ENCFF719VRZ 1011723391 ENCODE Processing Pipeline c46511a10a0230df227a43293db84195 https://www.encodeproject.org/files/ENCFF048VBE/@@download/ENCFF048VBE.bigWig hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF168HMJ bigWig signal p-value ENCSR996ESX ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFRKB-human ENCAB194SBI DNA False 2018-01-26 ENCODE 1 ENCFF903TVU, ENCFF910IKB 1094800578 ENCODE Processing Pipeline cc9d600b9522caf06afb2dff2be07c55 https://www.encodeproject.org/files/ENCFF168HMJ/@@download/ENCFF168HMJ.bigWig GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF200YFR bigWig signal p-value ENCSR996ESX ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFRKB-human ENCAB194SBI DNA False 2018-01-26 ENCODE 1, 2 ENCFF051LWI, ENCFF531EIP, ENCFF581ZJL, ENCFF719VRZ 1665006367 ENCODE Processing Pipeline 4a7a89fa5cbfeb95d2d38c953bee97b3 https://www.encodeproject.org/files/ENCFF200YFR/@@download/ENCFF200YFR.bigWig hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF469BRK bigWig signal p-value ENCSR996ESX ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFRKB-human ENCAB194SBI DNA False 2018-01-26 ENCODE 1, 2 ENCFF112SEL, ENCFF227IZS, ENCFF903TVU, ENCFF910IKB 1770153437 ENCODE Processing Pipeline 32d7c03e44e209eccd39b8180817fe43 https://www.encodeproject.org/files/ENCFF469BRK/@@download/ENCFF469BRK.bigWig GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF630SOG bed narrowPeak peaks ENCSR996ESX ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFRKB-human ENCAB194SBI DNA False 2018-01-26 ENCODE 1, 2 ENCFF051LWI, ENCFF531EIP, ENCFF581ZJL, ENCFF719VRZ 7165816 ENCODE Processing Pipeline 7b6f951b759382536698cda151ec3666 https://www.encodeproject.org/files/ENCFF630SOG/@@download/ENCFF630SOG.bed.gz hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF239MIY bigBed narrowPeak peaks ENCSR996ESX ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFRKB-human ENCAB194SBI DNA False 2018-01-26 ENCODE 1 ENCFF648NVD 13335425 ENCODE Processing Pipeline 7df9d6b74529f49aed9ccc22ed68096c https://www.encodeproject.org/files/ENCFF239MIY/@@download/ENCFF239MIY.bigBed hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF379NRU bigWig signal p-value ENCSR996ESX ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFRKB-human ENCAB194SBI DNA False 2018-01-26 ENCODE 2 ENCFF112SEL, ENCFF227IZS 1168724612 ENCODE Processing Pipeline c7240d4be67622a642f1a40ac1858dbe https://www.encodeproject.org/files/ENCFF379NRU/@@download/ENCFF379NRU.bigWig GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF745VDK bigWig fold change over control ENCSR996ESX ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFRKB-human ENCAB194SBI DNA False 2018-01-26 ENCODE 2 ENCFF051LWI, ENCFF531EIP 1233028751 ENCODE Processing Pipeline 0c991c68ac3c04c9b054ca499901cfa6 https://www.encodeproject.org/files/ENCFF745VDK/@@download/ENCFF745VDK.bigWig hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF898OLL bigWig fold change over control ENCSR996ESX ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFRKB-human ENCAB194SBI DNA False 2018-01-26 ENCODE 1, 2 ENCFF112SEL, ENCFF227IZS, ENCFF903TVU, ENCFF910IKB 2032644428 ENCODE Processing Pipeline 58ef0ef4e8100ada2f230cfb9be22ca1 https://www.encodeproject.org/files/ENCFF898OLL/@@download/ENCFF898OLL.bigWig GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF139EAR bed narrowPeak peaks ENCSR996ESX ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFRKB-human ENCAB194SBI DNA False 2018-01-26 ENCODE 2 ENCFF051LWI, ENCFF531EIP 6591880 ENCODE Processing Pipeline 9325df784d9bedd79174dcf72faeafdf https://www.encodeproject.org/files/ENCFF139EAR/@@download/ENCFF139EAR.bed.gz hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF180FHR bigBed narrowPeak peaks ENCSR996ESX ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFRKB-human ENCAB194SBI DNA False 2018-01-26 ENCODE 2 ENCFF139EAR 13197817 ENCODE Processing Pipeline 726feb54a82671a74dbbc302f1c4da6e https://www.encodeproject.org/files/ENCFF180FHR/@@download/ENCFF180FHR.bigBed hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF220IME bed narrowPeak conservative idr thresholded peaks ENCSR996ESX ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFRKB-human ENCAB194SBI DNA False 2018-01-26 ENCODE 1, 2 ENCFF001TDO, ENCFF139EAR, ENCFF630SOG, ENCFF648NVD 112992 ENCODE Processing Pipeline 6c16eb050eb226edb03b2d3307ecdd03 https://www.encodeproject.org/files/ENCFF220IME/@@download/ENCFF220IME.bed.gz hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF007OCA bigWig fold change over control ENCSR996ESX ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFRKB-human ENCAB194SBI DNA False 2018-01-26 ENCODE 1, 2 ENCFF051LWI, ENCFF531EIP, ENCFF581ZJL, ENCFF719VRZ 2032168241 ENCODE Processing Pipeline 24f6845fb2bb3d06ce85630018155f01 https://www.encodeproject.org/files/ENCFF007OCA/@@download/ENCFF007OCA.bigWig hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF748ZTS bigWig fold change over control ENCSR996ESX ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFRKB-human ENCAB194SBI DNA False 2018-01-26 ENCODE 1 ENCFF903TVU, ENCFF910IKB 1009200407 ENCODE Processing Pipeline 2fc8ff7a54d102a183f30ae262b96e98 https://www.encodeproject.org/files/ENCFF748ZTS/@@download/ENCFF748ZTS.bigWig GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF648NVD bed narrowPeak peaks ENCSR996ESX ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFRKB-human ENCAB194SBI DNA False 2018-01-26 ENCODE 1 ENCFF581ZJL, ENCFF719VRZ 6216410 ENCODE Processing Pipeline 87ad634f7b226f042012f921a2cbbf20 https://www.encodeproject.org/files/ENCFF648NVD/@@download/ENCFF648NVD.bed.gz hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF801XJL bigBed narrowPeak peaks ENCSR996ESX ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFRKB-human ENCAB194SBI DNA False 2018-01-26 ENCODE 1, 2 ENCFF630SOG 13135905 ENCODE Processing Pipeline bc13fc0448aff066fa8148cc1dad7c15 https://www.encodeproject.org/files/ENCFF801XJL/@@download/ENCFF801XJL.bigBed hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF677OWM bed narrowPeak optimal idr thresholded peaks ENCSR996ESX ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFRKB-human ENCAB194SBI DNA False 2018-01-26 ENCODE 1, 2 ENCFF001TDO, ENCFF139EAR, ENCFF630SOG, ENCFF648NVD 149805 ENCODE Processing Pipeline a3af5e542702471717992287eaae5b71 https://www.encodeproject.org/files/ENCFF677OWM/@@download/ENCFF677OWM.bed.gz hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF986ACD bigBed narrowPeak conservative idr thresholded peaks ENCSR996ESX ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFRKB-human ENCAB194SBI DNA False 2018-01-26 ENCODE 1, 2 ENCFF220IME 314124 ENCODE Processing Pipeline 0da747eae2090c4f3b58f9775ba34fe6 https://www.encodeproject.org/files/ENCFF986ACD/@@download/ENCFF986ACD.bigBed hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF932FDI bed narrowPeak peaks ENCSR996ESX ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFRKB-human ENCAB194SBI DNA False 2018-01-26 ENCODE 1 ENCFF903TVU, ENCFF910IKB 6212749 ENCODE Processing Pipeline 21b600e0c137e8832ad885f0168c5d30 https://www.encodeproject.org/files/ENCFF932FDI/@@download/ENCFF932FDI.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF251XKK bigWig fold change over control ENCSR996ESX ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFRKB-human ENCAB194SBI DNA False 2018-01-26 ENCODE 2 ENCFF112SEL, ENCFF227IZS 1238596637 ENCODE Processing Pipeline 4d7cf1057b57071e19574297c48aad5d https://www.encodeproject.org/files/ENCFF251XKK/@@download/ENCFF251XKK.bigWig GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF111OBX bigBed narrowPeak optimal idr thresholded peaks ENCSR996ESX ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFRKB-human ENCAB194SBI DNA False 2018-01-26 ENCODE 1, 2 ENCFF677OWM 380509 ENCODE Processing Pipeline a3f87bfce07994ddd592ebc4a4772ecc https://www.encodeproject.org/files/ENCFF111OBX/@@download/ENCFF111OBX.bigBed hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF479SHP bed narrowPeak peaks ENCSR996ESX ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFRKB-human ENCAB194SBI DNA False 2018-01-26 ENCODE 2 ENCFF112SEL, ENCFF227IZS 6589704 ENCODE Processing Pipeline 1e81fc52846e2e92f25c6fa35350ad15 https://www.encodeproject.org/files/ENCFF479SHP/@@download/ENCFF479SHP.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF500WWL bed narrowPeak peaks ENCSR996ESX ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFRKB-human ENCAB194SBI DNA False 2018-01-26 ENCODE 1, 2 ENCFF112SEL, ENCFF227IZS, ENCFF903TVU, ENCFF910IKB 7162057 ENCODE Processing Pipeline 06109ab096430611900779b666679020 https://www.encodeproject.org/files/ENCFF500WWL/@@download/ENCFF500WWL.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF396OIO bigBed narrowPeak peaks ENCSR996ESX ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFRKB-human ENCAB194SBI DNA False 2018-01-26 ENCODE 1 ENCFF932FDI 13344935 ENCODE Processing Pipeline 3c38213ce0d1f119854e873b281f49ea https://www.encodeproject.org/files/ENCFF396OIO/@@download/ENCFF396OIO.bigBed GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF676TFX bigBed narrowPeak peaks ENCSR996ESX ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFRKB-human ENCAB194SBI DNA False 2018-01-26 ENCODE 2 ENCFF479SHP 13206240 ENCODE Processing Pipeline 07f0cb40175a5739d8db7fb43b5eae54 https://www.encodeproject.org/files/ENCFF676TFX/@@download/ENCFF676TFX.bigBed GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF101LOL bigBed narrowPeak peaks ENCSR996ESX ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFRKB-human ENCAB194SBI DNA False 2018-01-26 ENCODE 1, 2 ENCFF500WWL 13140515 ENCODE Processing Pipeline 190d0555bffca2d06b1e48bbbfbf50f0 https://www.encodeproject.org/files/ENCFF101LOL/@@download/ENCFF101LOL.bigBed GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF145PDQ bigBed narrowPeak optimal idr thresholded peaks ENCSR996ESX ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFRKB-human ENCAB194SBI DNA False 2018-01-26 ENCODE 1, 2 ENCFF779KIS 378580 ENCODE Processing Pipeline ada32f26f604d75ce2d0af68e5d17420 https://www.encodeproject.org/files/ENCFF145PDQ/@@download/ENCFF145PDQ.bigBed GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF847JCH bed narrowPeak conservative idr thresholded peaks ENCSR996ESX ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFRKB-human ENCAB194SBI DNA False 2018-01-26 ENCODE 1, 2 ENCFF419RSJ, ENCFF479SHP, ENCFF500WWL, ENCFF932FDI 111826 ENCODE Processing Pipeline 0598671520337ab37267c841df24e401 https://www.encodeproject.org/files/ENCFF847JCH/@@download/ENCFF847JCH.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF823GNG bigBed narrowPeak conservative idr thresholded peaks ENCSR996ESX ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFRKB-human ENCAB194SBI DNA False 2018-01-26 ENCODE 1, 2 ENCFF847JCH 264566 ENCODE Processing Pipeline 08a0ce1ce332151d660b7867ab1767be https://www.encodeproject.org/files/ENCFF823GNG/@@download/ENCFF823GNG.bigBed GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF779KIS bed narrowPeak optimal idr thresholded peaks ENCSR996ESX ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFRKB-human ENCAB194SBI DNA False 2018-01-26 ENCODE 1, 2 ENCFF419RSJ, ENCFF479SHP, ENCFF500WWL, ENCFF932FDI 147610 ENCODE Processing Pipeline ef3e0a027be245d770f97067ee92e74e https://www.encodeproject.org/files/ENCFF779KIS/@@download/ENCFF779KIS.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF000ZCQ bigBed narrowPeak peaks ENCSR000EFZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens UBTF-human ENCAB000AME DNA see document see document False 2012-05-14 ENCODE ENCFF001VPG 2238190 Michael Snyder, Stanford 09ce0d5343e69c54f27508bf1048655a https://www.encodeproject.org/files/ENCFF000ZCQ/@@download/ENCFF000ZCQ.bigBed hg19 archived moderate library complexity, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF000ZCR fastq reads ENCSR000EFZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens UBTF-human ENCAB000AME DNA see document see document False 2012-05-14 ENCODE 1 1 36 single-ended 1113181662 Michael Snyder, Stanford cc3e5365dc5bb518fbbcfdc6b19a0855 https://www.encodeproject.org/files/ENCFF000ZCR/@@download/ENCFF000ZCR.fastq.gz Illumina Genome Analyzer /files/ENCFF000YQB/ released moderate library complexity, low read depth, inconsistent control read length, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF000ZCT fastq reads ENCSR000EFZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens UBTF-human ENCAB000AME DNA see document see document False 2012-05-14 ENCODE 2 1 36 single-ended 991458245 Michael Snyder, Stanford fd1823cafc13dab93981e74698dc53c5 https://www.encodeproject.org/files/ENCFF000ZCT/@@download/ENCFF000ZCT.fastq.gz Illumina Genome Analyzer /files/ENCFF000YQC/ released moderate library complexity, low read depth, inconsistent control read length, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF000ZCV bigWig signal ENCSR000EFZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens UBTF-human ENCAB000AME DNA see document see document False 2012-05-14 ENCODE 295091661 Michael Snyder, Stanford 92d3d32965b51a158e43e416fac6be95 https://www.encodeproject.org/files/ENCFF000ZCV/@@download/ENCFF000ZCV.bigWig hg19 archived moderate library complexity, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample, missing derived_from ENCFF000ZCW bam alignments ENCSR000EFZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens UBTF-human ENCAB000AME DNA see document see document False 2012-05-14 ENCODE 2 1 342152211 Michael Snyder, Stanford 5ff1973455fe5201a34f49f0cd145f73 https://www.encodeproject.org/files/ENCFF000ZCW/@@download/ENCFF000ZCW.bam hg19 archived moderate library complexity, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample, missing derived_from ENCFF000ZCX bam alignments ENCSR000EFZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens UBTF-human ENCAB000AME DNA see document see document False 2012-05-14 ENCODE 1 1 442224686 Michael Snyder, Stanford 553365e6ddd90efb636464540901cd6c https://www.encodeproject.org/files/ENCFF000ZCX/@@download/ENCFF000ZCX.bam hg19 archived moderate library complexity, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample, missing derived_from ENCFF001VPG bed narrowPeak peaks ENCSR000EFZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens UBTF-human ENCAB000AME DNA see document see document False 2012-05-14 ENCODE 905466 Michael Snyder, Stanford a5cc3f9197a9d86b96881b76f6d8a663 https://www.encodeproject.org/files/ENCFF001VPG/@@download/ENCFF001VPG.bed.gz hg19 archived moderate library complexity, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample, missing derived_from ENCFF002CYO bed narrowPeak optimal idr thresholded peaks ENCSR000EFZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens UBTF-human ENCAB000AME DNA see document see document False 2012-05-14 ENCODE 351292 ENCODE Consortium Analysis Working Group 44267b4dcba8700327baacc860fcbc08 https://www.encodeproject.org/files/ENCFF002CYO/@@download/ENCFF002CYO.bed.gz hg19 archived moderate library complexity, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample, missing derived_from ENCFF804FLN bigBed narrowPeak optimal idr thresholded peaks ENCSR000EFZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens UBTF-human ENCAB000AME DNA see document see document False 2012-05-14 ENCODE ENCFF002CYO 916263 ENCODE Consortium 014ed12a418c3d90d852d1c44d910108 https://www.encodeproject.org/files/ENCFF804FLN/@@download/ENCFF804FLN.bigBed hg19 archived moderate library complexity, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF461FMW bam unfiltered alignments ENCSR000EFZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens UBTF-human ENCAB000AME DNA see document see document False 2012-05-14 ENCODE 2 28 ENCFF000ZCT, ENCFF643CGH 837577230 ENCODE Processing Pipeline d09e1a5291bd47eb8a0de8197d90075b https://www.encodeproject.org/files/ENCFF461FMW/@@download/ENCFF461FMW.bam GRCh38 released moderate library complexity, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF552IGP bam unfiltered alignments ENCSR000EFZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens UBTF-human ENCAB000AME DNA see document see document False 2012-05-14 ENCODE 1 28 ENCFF000ZCR, ENCFF643CGH 967007443 ENCODE Processing Pipeline e4690eac0f9ea881a9e77d1167575525 https://www.encodeproject.org/files/ENCFF552IGP/@@download/ENCFF552IGP.bam GRCh38 released moderate library complexity, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF012LYY bam alignments ENCSR000EFZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens UBTF-human ENCAB000AME DNA see document see document False 2012-05-14 ENCODE 2 28 ENCFF000ZCT, ENCFF643CGH 380636347 ENCODE Processing Pipeline 219bb243c27e774a1fd629bd6b0ea26e https://www.encodeproject.org/files/ENCFF012LYY/@@download/ENCFF012LYY.bam GRCh38 released moderate library complexity, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF314KHY bam alignments ENCSR000EFZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens UBTF-human ENCAB000AME DNA see document see document False 2012-05-14 ENCODE 1 28 ENCFF000ZCR, ENCFF643CGH 476394945 ENCODE Processing Pipeline 725899a94528b0a247415b5bcfd87fcd https://www.encodeproject.org/files/ENCFF314KHY/@@download/ENCFF314KHY.bam GRCh38 released moderate library complexity, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF978UZM bam unfiltered alignments ENCSR000EFZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens UBTF-human ENCAB000AME DNA see document see document False 2012-05-14 ENCODE 2 28 ENCFF000ZCT, ENCFF807MUK 837337500 ENCODE Processing Pipeline 79c2456d5e8dde023988121d62db88f6 https://www.encodeproject.org/files/ENCFF978UZM/@@download/ENCFF978UZM.bam hg19 released moderate library complexity, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF134SYL bam unfiltered alignments ENCSR000EFZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens UBTF-human ENCAB000AME DNA see document see document False 2012-05-14 ENCODE 1 28 ENCFF000ZCR, ENCFF807MUK 968544676 ENCODE Processing Pipeline 2312df2fcffbc3289149027afd9c26f6 https://www.encodeproject.org/files/ENCFF134SYL/@@download/ENCFF134SYL.bam hg19 released moderate library complexity, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF916JGB bam alignments ENCSR000EFZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens UBTF-human ENCAB000AME DNA see document see document False 2012-05-14 ENCODE 2 28 ENCFF000ZCT, ENCFF807MUK 381347388 ENCODE Processing Pipeline 5984040e0d4293715d9536cb9394d086 https://www.encodeproject.org/files/ENCFF916JGB/@@download/ENCFF916JGB.bam hg19 released moderate library complexity, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF002THP bam alignments ENCSR000EFZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens UBTF-human ENCAB000AME DNA see document see document False 2012-05-14 ENCODE 1 28 ENCFF000ZCR, ENCFF807MUK 477125350 ENCODE Processing Pipeline 3b662f7de84be15e252eca4ed0fe4801 https://www.encodeproject.org/files/ENCFF002THP/@@download/ENCFF002THP.bam hg19 released moderate library complexity, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF468ESM bigWig signal p-value ENCSR000EFZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens UBTF-human ENCAB000AME DNA see document see document False 2012-05-14 ENCODE 2 ENCFF498SAC, ENCFF916JGB 280031833 ENCODE Processing Pipeline 42e0eb3504ad980350581731d9bdec7e https://www.encodeproject.org/files/ENCFF468ESM/@@download/ENCFF468ESM.bigWig hg19 released moderate library complexity, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF232SFM bigWig fold change over control ENCSR000EFZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens UBTF-human ENCAB000AME DNA see document see document False 2012-05-14 ENCODE 2 ENCFF498SAC, ENCFF916JGB 178223526 ENCODE Processing Pipeline 554583653cc1b6dae9bdc74ef0a4ea97 https://www.encodeproject.org/files/ENCFF232SFM/@@download/ENCFF232SFM.bigWig hg19 released moderate library complexity, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF466ZQX bigWig fold change over control ENCSR000EFZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens UBTF-human ENCAB000AME DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF002THP, ENCFF498SAC, ENCFF732TLR, ENCFF916JGB 453845940 ENCODE Processing Pipeline 12aa9549ae6e9e21bb57fe72767cbbc2 https://www.encodeproject.org/files/ENCFF466ZQX/@@download/ENCFF466ZQX.bigWig hg19 released moderate library complexity, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF512HLJ bed narrowPeak peaks ENCSR000EFZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens UBTF-human ENCAB000AME DNA see document see document False 2012-05-14 ENCODE 2 ENCFF498SAC, ENCFF916JGB 4795321 ENCODE Processing Pipeline 3c17b1179cf2f3456c17a2153ee6c4f8 https://www.encodeproject.org/files/ENCFF512HLJ/@@download/ENCFF512HLJ.bed.gz hg19 released moderate library complexity, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF621XGL bed narrowPeak peaks ENCSR000EFZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens UBTF-human ENCAB000AME DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF002THP, ENCFF498SAC, ENCFF732TLR, ENCFF916JGB 5966323 ENCODE Processing Pipeline bc4a9002169ced6f6306d4a4d82969bd https://www.encodeproject.org/files/ENCFF621XGL/@@download/ENCFF621XGL.bed.gz hg19 released moderate library complexity, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF671DOL bed narrowPeak optimal idr thresholded peaks ENCSR000EFZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens UBTF-human ENCAB000AME DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF001TDO, ENCFF507ZLI, ENCFF512HLJ, ENCFF621XGL 356609 ENCODE Processing Pipeline 64dc4d3e4a826b90341dc7f40f98f446 https://www.encodeproject.org/files/ENCFF671DOL/@@download/ENCFF671DOL.bed.gz hg19 released moderate library complexity, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF150VMW bed narrowPeak peaks ENCSR000EFZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens UBTF-human ENCAB000AME DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF012LYY, ENCFF156NSV, ENCFF314KHY, ENCFF715JBE 5854344 ENCODE Processing Pipeline c1ecb96748dd0e570c2a1b520209d9e1 https://www.encodeproject.org/files/ENCFF150VMW/@@download/ENCFF150VMW.bed.gz GRCh38 released moderate library complexity, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF793HLM bigBed narrowPeak peaks ENCSR000EFZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens UBTF-human ENCAB000AME DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF150VMW 13253288 ENCODE Processing Pipeline b6fbbd29bde0c18b87759f7d768d3c28 https://www.encodeproject.org/files/ENCFF793HLM/@@download/ENCFF793HLM.bigBed GRCh38 released moderate library complexity, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF183WVQ bigWig fold change over control ENCSR000EFZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens UBTF-human ENCAB000AME DNA see document see document False 2012-05-14 ENCODE 1 ENCFF002THP, ENCFF498SAC, ENCFF732TLR 292140508 ENCODE Processing Pipeline 8f2d3945ca17eb05bf49367a7516c925 https://www.encodeproject.org/files/ENCFF183WVQ/@@download/ENCFF183WVQ.bigWig hg19 released moderate library complexity, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF526KSL bigWig signal p-value ENCSR000EFZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens UBTF-human ENCAB000AME DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF002THP, ENCFF498SAC, ENCFF732TLR, ENCFF916JGB 510132888 ENCODE Processing Pipeline a54fb97b66dc3f686c8a2153ae2ae8e8 https://www.encodeproject.org/files/ENCFF526KSL/@@download/ENCFF526KSL.bigWig hg19 released moderate library complexity, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF642GIH bigBed narrowPeak peaks ENCSR000EFZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens UBTF-human ENCAB000AME DNA see document see document False 2012-05-14 ENCODE 1 ENCFF507ZLI 12965235 ENCODE Processing Pipeline 7086186f4c5dd44f0f59e3c080a5cae8 https://www.encodeproject.org/files/ENCFF642GIH/@@download/ENCFF642GIH.bigBed hg19 released moderate library complexity, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF613NZO bed narrowPeak conservative idr thresholded peaks ENCSR000EFZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens UBTF-human ENCAB000AME DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF001TDO, ENCFF507ZLI, ENCFF512HLJ, ENCFF621XGL 342348 ENCODE Processing Pipeline 4c28e667afc32b065cd396f9b114d290 https://www.encodeproject.org/files/ENCFF613NZO/@@download/ENCFF613NZO.bed.gz hg19 released moderate library complexity, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF653CAX bigWig signal p-value ENCSR000EFZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens UBTF-human ENCAB000AME DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF012LYY, ENCFF156NSV, ENCFF314KHY, ENCFF715JBE 506488484 ENCODE Processing Pipeline 03f6eaed2b7d02eeb77f896edbc3e9f5 https://www.encodeproject.org/files/ENCFF653CAX/@@download/ENCFF653CAX.bigWig GRCh38 released moderate library complexity, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF505BKT bigWig fold change over control ENCSR000EFZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens UBTF-human ENCAB000AME DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF012LYY, ENCFF156NSV, ENCFF314KHY, ENCFF715JBE 446866396 ENCODE Processing Pipeline 988dfbb2f79c6fd0318e1c32a1ecbb0c https://www.encodeproject.org/files/ENCFF505BKT/@@download/ENCFF505BKT.bigWig GRCh38 released moderate library complexity, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF161BNR bed narrowPeak conservative idr thresholded peaks ENCSR000EFZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens UBTF-human ENCAB000AME DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF150VMW, ENCFF284WGW, ENCFF419RSJ, ENCFF462NBV 344314 ENCODE Processing Pipeline 8f91855d2208a725a3e04da0de1f0322 https://www.encodeproject.org/files/ENCFF161BNR/@@download/ENCFF161BNR.bed.gz GRCh38 released moderate library complexity, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF299EPH bigBed narrowPeak peaks ENCSR000EFZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens UBTF-human ENCAB000AME DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF621XGL 13256076 ENCODE Processing Pipeline 726034fbbf68a3ee5cb3db4adc977c7b https://www.encodeproject.org/files/ENCFF299EPH/@@download/ENCFF299EPH.bigBed hg19 released moderate library complexity, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF383ZNR bigBed narrowPeak conservative idr thresholded peaks ENCSR000EFZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens UBTF-human ENCAB000AME DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF161BNR 843154 ENCODE Processing Pipeline 13688771650787b155c24db08a248911 https://www.encodeproject.org/files/ENCFF383ZNR/@@download/ENCFF383ZNR.bigBed GRCh38 released moderate library complexity, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF035DJD bigWig signal p-value ENCSR000EFZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens UBTF-human ENCAB000AME DNA see document see document False 2012-05-14 ENCODE 1 ENCFF002THP, ENCFF498SAC, ENCFF732TLR 381956547 ENCODE Processing Pipeline d37de779051785b0bcddb46d4166e974 https://www.encodeproject.org/files/ENCFF035DJD/@@download/ENCFF035DJD.bigWig hg19 released moderate library complexity, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF507ZLI bed narrowPeak peaks ENCSR000EFZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens UBTF-human ENCAB000AME DNA see document see document False 2012-05-14 ENCODE 1 ENCFF002THP, ENCFF498SAC, ENCFF732TLR 5173454 ENCODE Processing Pipeline 8f6f2b56cbac1449b28960c1e518cc38 https://www.encodeproject.org/files/ENCFF507ZLI/@@download/ENCFF507ZLI.bed.gz hg19 released moderate library complexity, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF603ZSN bigBed narrowPeak peaks ENCSR000EFZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens UBTF-human ENCAB000AME DNA see document see document False 2012-05-14 ENCODE 2 ENCFF512HLJ 10314072 ENCODE Processing Pipeline f2be37eb1cd8337bdb090c947e431b6e https://www.encodeproject.org/files/ENCFF603ZSN/@@download/ENCFF603ZSN.bigBed hg19 released moderate library complexity, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF481NFW bigBed narrowPeak conservative idr thresholded peaks ENCSR000EFZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens UBTF-human ENCAB000AME DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF613NZO 837668 ENCODE Processing Pipeline e707762bc2c72ed9a446cb09dc9e3ca7 https://www.encodeproject.org/files/ENCFF481NFW/@@download/ENCFF481NFW.bigBed hg19 released moderate library complexity, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF140XDQ bigBed narrowPeak optimal idr thresholded peaks ENCSR000EFZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens UBTF-human ENCAB000AME DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF671DOL 863885 ENCODE Processing Pipeline 7009db408f3eab91ea8e3182c08d6b1f https://www.encodeproject.org/files/ENCFF140XDQ/@@download/ENCFF140XDQ.bigBed hg19 released moderate library complexity, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF227CXX bigWig signal p-value ENCSR000EFZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens UBTF-human ENCAB000AME DNA see document see document False 2012-05-14 ENCODE 1 ENCFF156NSV, ENCFF314KHY, ENCFF715JBE 433896569 ENCODE Processing Pipeline 4855b2544bca816e95132243e4e33e2c https://www.encodeproject.org/files/ENCFF227CXX/@@download/ENCFF227CXX.bigWig GRCh38 released moderate library complexity, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF012EFE bigWig fold change over control ENCSR000EFZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens UBTF-human ENCAB000AME DNA see document see document False 2012-05-14 ENCODE 1 ENCFF156NSV, ENCFF314KHY, ENCFF715JBE 292736075 ENCODE Processing Pipeline 0a7846c2f86731b7e942255f3ebe1b26 https://www.encodeproject.org/files/ENCFF012EFE/@@download/ENCFF012EFE.bigWig GRCh38 released moderate library complexity, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF746QBD bigWig signal p-value ENCSR000EFZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens UBTF-human ENCAB000AME DNA see document see document False 2012-05-14 ENCODE 2 ENCFF012LYY, ENCFF156NSV 284566226 ENCODE Processing Pipeline bb8b2f567d1a753f17d33e114a30c6bb https://www.encodeproject.org/files/ENCFF746QBD/@@download/ENCFF746QBD.bigWig GRCh38 released moderate library complexity, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF462NBV bed narrowPeak peaks ENCSR000EFZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens UBTF-human ENCAB000AME DNA see document see document False 2012-05-14 ENCODE 1 ENCFF156NSV, ENCFF314KHY, ENCFF715JBE 5112577 ENCODE Processing Pipeline f96968730b5c74b49be1b60a153f8627 https://www.encodeproject.org/files/ENCFF462NBV/@@download/ENCFF462NBV.bed.gz GRCh38 released moderate library complexity, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF284WGW bed narrowPeak peaks ENCSR000EFZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens UBTF-human ENCAB000AME DNA see document see document False 2012-05-14 ENCODE 2 ENCFF012LYY, ENCFF156NSV 4682405 ENCODE Processing Pipeline 34f0551e2ede31364fd739542c3554fb https://www.encodeproject.org/files/ENCFF284WGW/@@download/ENCFF284WGW.bed.gz GRCh38 released moderate library complexity, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF418WGX bigBed narrowPeak peaks ENCSR000EFZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens UBTF-human ENCAB000AME DNA see document see document False 2012-05-14 ENCODE 2 ENCFF284WGW 10097052 ENCODE Processing Pipeline f8611dcc538db3fd355ccf97bde2fa6b https://www.encodeproject.org/files/ENCFF418WGX/@@download/ENCFF418WGX.bigBed GRCh38 released moderate library complexity, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF403TAF bed narrowPeak optimal idr thresholded peaks ENCSR000EFZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens UBTF-human ENCAB000AME DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF150VMW, ENCFF284WGW, ENCFF419RSJ, ENCFF462NBV 365960 ENCODE Processing Pipeline 619cd935342a7e3844fee07a9bd87d84 https://www.encodeproject.org/files/ENCFF403TAF/@@download/ENCFF403TAF.bed.gz GRCh38 released moderate library complexity, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF800EJL bigBed narrowPeak optimal idr thresholded peaks ENCSR000EFZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens UBTF-human ENCAB000AME DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF403TAF 881435 ENCODE Processing Pipeline ddf87e08ae56f77e497f8fb25f4c5371 https://www.encodeproject.org/files/ENCFF800EJL/@@download/ENCFF800EJL.bigBed GRCh38 released moderate library complexity, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF243KHO bigWig fold change over control ENCSR000EFZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens UBTF-human ENCAB000AME DNA see document see document False 2012-05-14 ENCODE 2 ENCFF012LYY, ENCFF156NSV 180025296 ENCODE Processing Pipeline 344a27d0923e9f187425b2101b2929f2 https://www.encodeproject.org/files/ENCFF243KHO/@@download/ENCFF243KHO.bigWig GRCh38 released moderate library complexity, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF977FEU bigBed narrowPeak peaks ENCSR000EFZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens UBTF-human ENCAB000AME DNA see document see document False 2012-05-14 ENCODE 1 ENCFF462NBV 12940384 ENCODE Processing Pipeline ab3715f6683e731f14f37022d87f21f7 https://www.encodeproject.org/files/ENCFF977FEU/@@download/ENCFF977FEU.bigBed GRCh38 released moderate library complexity, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF000YIZ bam alignments ENCSR000EZT ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute JUN-human ENCAB000AER DNA see document see document False 2011-10-29 ENCODE 1 ENCFF000YPL 706078949 Sherman Weissman, Yale 7fd756d21b6e17b5082bfe921a80f249 https://www.encodeproject.org/files/ENCFF000YIZ/@@download/ENCFF000YIZ.bam hg19 archived mixed read lengths, mild to moderate bottlenecking biological replicates with identical biosample insufficient read length, control insufficient read depth, insufficient read depth missing control alignments ENCFF000YJA bigBed narrowPeak peaks ENCSR000EZT ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute JUN-human ENCAB000AER DNA see document see document False 2011-10-29 ENCODE ENCFF001VMM 218316 Sherman Weissman, Yale 9146f7089183afcd46667405b7f3582e https://www.encodeproject.org/files/ENCFF000YJA/@@download/ENCFF000YJA.bigBed hg19 archived mixed read lengths, mild to moderate bottlenecking biological replicates with identical biosample insufficient read length, control insufficient read depth, insufficient read depth missing control alignments ENCFF000YJB bam alignments ENCSR000EZT ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute JUN-human ENCAB000AER DNA see document see document False 2011-10-29 ENCODE 2 ENCFF000YPN 849052701 Sherman Weissman, Yale 776839835931527c9fc8e443575b3ecf https://www.encodeproject.org/files/ENCFF000YJB/@@download/ENCFF000YJB.bam hg19 archived mixed read lengths, mild to moderate bottlenecking biological replicates with identical biosample insufficient read length, control insufficient read depth, insufficient read depth missing control alignments ENCFF000YJC bigWig signal ENCSR000EZT ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute JUN-human ENCAB000AER DNA see document see document False 2011-10-29 ENCODE 344654691 Sherman Weissman, Yale 1bbac3736646ab6e07265e478ad7f3ec https://www.encodeproject.org/files/ENCFF000YJC/@@download/ENCFF000YJC.bigWig hg19 archived mixed read lengths, mild to moderate bottlenecking biological replicates with identical biosample, missing derived_from insufficient read length, control insufficient read depth, insufficient read depth missing control alignments ENCFF000YPL fastq reads ENCSR000EZT ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute JUN-human ENCAB000AER DNA see document see document False 2011-10-29 ENCODE 1 1 27 single-ended 533218447 Sherman Weissman, Yale 74b7d26cc18e392b830f5da46be6156a https://www.encodeproject.org/files/ENCFF000YPL/@@download/ENCFF000YPL.fastq.gz Illumina Genome Analyzer /files/ENCFF000YPM/ released mixed read lengths, inconsistent control read length, mild to moderate bottlenecking biological replicates with identical biosample insufficient read length, control insufficient read depth, insufficient read depth missing control alignments ENCFF000YPN fastq reads ENCSR000EZT ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute JUN-human ENCAB000AER DNA see document see document False 2011-10-29 ENCODE 2 1 34 single-ended 726579785 Sherman Weissman, Yale 093e3c61fabba5398cb2fdc9297dc1ee https://www.encodeproject.org/files/ENCFF000YPN/@@download/ENCFF000YPN.fastq.gz Illumina Genome Analyzer /files/ENCFF000YPM/ released mixed read lengths, mild to moderate bottlenecking biological replicates with identical biosample insufficient read length, control insufficient read depth, insufficient read depth missing control alignments ENCFF001VMM bed narrowPeak peaks ENCSR000EZT ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute JUN-human ENCAB000AER DNA see document see document False 2011-10-29 ENCODE 79217 Sherman Weissman, Yale 1d4d0d158f699f5cf4263fe5ad85e9a9 https://www.encodeproject.org/files/ENCFF001VMM/@@download/ENCFF001VMM.bed.gz hg19 archived mixed read lengths, mild to moderate bottlenecking biological replicates with identical biosample, missing derived_from insufficient read length, control insufficient read depth, insufficient read depth missing control alignments ENCFF002CWA bed narrowPeak optimal idr thresholded peaks ENCSR000EZT ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute JUN-human ENCAB000AER DNA see document see document False 2011-10-29 ENCODE 183099 ENCODE Consortium Analysis Working Group 51f6da08d5b1a787ae904ac0bc01e2bc https://www.encodeproject.org/files/ENCFF002CWA/@@download/ENCFF002CWA.bed.gz hg19 archived mixed read lengths, mild to moderate bottlenecking biological replicates with identical biosample, missing derived_from insufficient read length, control insufficient read depth, insufficient read depth missing control alignments ENCFF262KKZ bigBed narrowPeak optimal idr thresholded peaks ENCSR000EZT ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute JUN-human ENCAB000AER DNA see document see document False 2011-10-29 ENCODE ENCFF002CWA 370225 ENCODE Consortium 8bdb9e52e87fe4b03b42452851c669bd https://www.encodeproject.org/files/ENCFF262KKZ/@@download/ENCFF262KKZ.bigBed hg19 archived mixed read lengths, mild to moderate bottlenecking biological replicates with identical biosample insufficient read length, control insufficient read depth, insufficient read depth missing control alignments ENCFF842TJX bam unfiltered alignments ENCSR000EZT ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute JUN-human ENCAB000AER DNA see document see document False 2011-10-29 ENCODE 2 27 ENCFF000YPN, ENCFF643CGH 782636164 ENCODE Processing Pipeline 4c650abf6cf46e0bd3417d53cd2e5cdc https://www.encodeproject.org/files/ENCFF842TJX/@@download/ENCFF842TJX.bam GRCh38 released mixed read lengths, mild to moderate bottlenecking biological replicates with identical biosample insufficient read length, control insufficient read depth, insufficient read depth missing control alignments ENCFF697LPL bam unfiltered alignments ENCSR000EZT ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute JUN-human ENCAB000AER DNA see document see document False 2011-10-29 ENCODE 1 27 ENCFF000YPL, ENCFF643CGH 708742973 ENCODE Processing Pipeline 3cb94c1f1fecbc3055a90c6762b957be https://www.encodeproject.org/files/ENCFF697LPL/@@download/ENCFF697LPL.bam GRCh38 released mixed read lengths, mild to moderate bottlenecking biological replicates with identical biosample insufficient read length, control insufficient read depth, insufficient read depth missing control alignments ENCFF144QMS bed narrowPeak peaks ENCSR000EZT ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute JUN-human ENCAB000AER DNA see document see document False 2011-10-29 ENCODE 2 ENCFF749RRI 1971851 ENCODE Processing Pipeline 99d446777be9c129bb2140ecaeadf9e3 https://www.encodeproject.org/files/ENCFF144QMS/@@download/ENCFF144QMS.bed.gz GRCh38 released mixed read lengths, mild to moderate bottlenecking biological replicates with identical biosample insufficient read length, control insufficient read depth, insufficient read depth missing control alignments ENCFF680SCG bigBed narrowPeak optimal idr thresholded peaks ENCSR000EZT ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute JUN-human ENCAB000AER DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF167WUZ 330755 ENCODE Processing Pipeline 2a2b54c67b86a32ce2c8a1d93277c30e https://www.encodeproject.org/files/ENCFF680SCG/@@download/ENCFF680SCG.bigBed GRCh38 released mixed read lengths, mild to moderate bottlenecking biological replicates with identical biosample insufficient read length, control insufficient read depth, insufficient read depth missing control alignments ENCFF198YAZ bigWig fold change over control ENCSR000EZT ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute JUN-human ENCAB000AER DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF749RRI, ENCFF784MLU 215946716 ENCODE Processing Pipeline 52980da42cf77a5110d29f813439d8e7 https://www.encodeproject.org/files/ENCFF198YAZ/@@download/ENCFF198YAZ.bigWig GRCh38 released mixed read lengths, mild to moderate bottlenecking biological replicates with identical biosample insufficient read length, control insufficient read depth, insufficient read depth missing control alignments ENCFF012RZJ bigBed narrowPeak peaks ENCSR000EZT ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute JUN-human ENCAB000AER DNA see document see document False 2011-10-29 ENCODE 1 ENCFF563FUW 4388152 ENCODE Processing Pipeline e79be4039b00ecfd942e3976ddb0ffbc https://www.encodeproject.org/files/ENCFF012RZJ/@@download/ENCFF012RZJ.bigBed GRCh38 released mixed read lengths, mild to moderate bottlenecking biological replicates with identical biosample insufficient read length, control insufficient read depth, insufficient read depth missing control alignments ENCFF914AMK bigBed narrowPeak peaks ENCSR000EZT ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute JUN-human ENCAB000AER DNA see document see document False 2011-10-29 ENCODE 2 ENCFF144QMS 4109659 ENCODE Processing Pipeline 34fa421264226c2f4e7bd389c23251e6 https://www.encodeproject.org/files/ENCFF914AMK/@@download/ENCFF914AMK.bigBed GRCh38 released mixed read lengths, mild to moderate bottlenecking biological replicates with identical biosample insufficient read length, control insufficient read depth, insufficient read depth missing control alignments ENCFF715XSB bigWig signal p-value ENCSR000EZT ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute JUN-human ENCAB000AER DNA see document see document False 2011-10-29 ENCODE 1 ENCFF784MLU 194088333 ENCODE Processing Pipeline 7ce2e539203a2ae39d6f907c2414590f https://www.encodeproject.org/files/ENCFF715XSB/@@download/ENCFF715XSB.bigWig GRCh38 released mixed read lengths, mild to moderate bottlenecking biological replicates with identical biosample insufficient read length, control insufficient read depth, insufficient read depth missing control alignments ENCFF590KNT bigWig fold change over control ENCSR000EZT ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute JUN-human ENCAB000AER DNA see document see document False 2011-10-29 ENCODE 1 ENCFF784MLU 128807902 ENCODE Processing Pipeline dd2f712a461377f6d2f56d5cc5109f3b https://www.encodeproject.org/files/ENCFF590KNT/@@download/ENCFF590KNT.bigWig GRCh38 released mixed read lengths, mild to moderate bottlenecking biological replicates with identical biosample insufficient read length, control insufficient read depth, insufficient read depth missing control alignments ENCFF909CSJ bigWig signal p-value ENCSR000EZT ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute JUN-human ENCAB000AER DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF749RRI, ENCFF784MLU 236895971 ENCODE Processing Pipeline 768223b6abff3f348a86cf2a351253a6 https://www.encodeproject.org/files/ENCFF909CSJ/@@download/ENCFF909CSJ.bigWig GRCh38 released mixed read lengths, mild to moderate bottlenecking biological replicates with identical biosample insufficient read length, control insufficient read depth, insufficient read depth missing control alignments ENCFF749RRI bam alignments ENCSR000EZT ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute JUN-human ENCAB000AER DNA see document see document False 2011-10-29 ENCODE 2 27 ENCFF000YPN, ENCFF643CGH 261318556 ENCODE Processing Pipeline 5c0e749088a06d123c8db295b0afab9f https://www.encodeproject.org/files/ENCFF749RRI/@@download/ENCFF749RRI.bam GRCh38 released mixed read lengths, mild to moderate bottlenecking biological replicates with identical biosample insufficient read length, control insufficient read depth, insufficient read depth missing control alignments ENCFF291UMT bed narrowPeak peaks ENCSR000EZT ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute JUN-human ENCAB000AER DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF749RRI, ENCFF784MLU 4193394 ENCODE Processing Pipeline ac42bf04d7ad06505e7626a4995d4ecb https://www.encodeproject.org/files/ENCFF291UMT/@@download/ENCFF291UMT.bed.gz GRCh38 released mixed read lengths, mild to moderate bottlenecking biological replicates with identical biosample insufficient read length, control insufficient read depth, insufficient read depth missing control alignments ENCFF784MLU bam alignments ENCSR000EZT ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute JUN-human ENCAB000AER DNA see document see document False 2011-10-29 ENCODE 1 27 ENCFF000YPL, ENCFF643CGH 302108506 ENCODE Processing Pipeline e919991e67b6a51429759c9bf96b9636 https://www.encodeproject.org/files/ENCFF784MLU/@@download/ENCFF784MLU.bam GRCh38 released mixed read lengths, mild to moderate bottlenecking biological replicates with identical biosample insufficient read length, control insufficient read depth, insufficient read depth missing control alignments ENCFF803DEO bigWig signal p-value ENCSR000EZT ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute JUN-human ENCAB000AER DNA see document see document False 2011-10-29 ENCODE 2 ENCFF749RRI 179703258 ENCODE Processing Pipeline 694cca445c802003dc722986e84132bc https://www.encodeproject.org/files/ENCFF803DEO/@@download/ENCFF803DEO.bigWig GRCh38 released mixed read lengths, mild to moderate bottlenecking biological replicates with identical biosample insufficient read length, control insufficient read depth, insufficient read depth missing control alignments ENCFF870OXQ bigWig fold change over control ENCSR000EZT ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute JUN-human ENCAB000AER DNA see document see document False 2011-10-29 ENCODE 2 ENCFF749RRI 114214304 ENCODE Processing Pipeline 543fa5bceeeecd4cb524226a7acbd461 https://www.encodeproject.org/files/ENCFF870OXQ/@@download/ENCFF870OXQ.bigWig GRCh38 released mixed read lengths, mild to moderate bottlenecking biological replicates with identical biosample insufficient read length, control insufficient read depth, insufficient read depth missing control alignments ENCFF563FUW bed narrowPeak peaks ENCSR000EZT ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute JUN-human ENCAB000AER DNA see document see document False 2011-10-29 ENCODE 1 ENCFF784MLU 2126899 ENCODE Processing Pipeline 60ddea27b8875f22a5a79a8107bbc8fc https://www.encodeproject.org/files/ENCFF563FUW/@@download/ENCFF563FUW.bed.gz GRCh38 released mixed read lengths, mild to moderate bottlenecking biological replicates with identical biosample insufficient read length, control insufficient read depth, insufficient read depth missing control alignments ENCFF090VAI bed narrowPeak conservative idr thresholded peaks ENCSR000EZT ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute JUN-human ENCAB000AER DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF144QMS, ENCFF291UMT, ENCFF419RSJ, ENCFF563FUW 134294 ENCODE Processing Pipeline ce47e41581a9b76f924ca31202b81e87 https://www.encodeproject.org/files/ENCFF090VAI/@@download/ENCFF090VAI.bed.gz GRCh38 released mixed read lengths, mild to moderate bottlenecking biological replicates with identical biosample insufficient read length, control insufficient read depth, insufficient read depth missing control alignments ENCFF605TOA bigBed narrowPeak conservative idr thresholded peaks ENCSR000EZT ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute JUN-human ENCAB000AER DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF090VAI 306194 ENCODE Processing Pipeline ebd5747a31e043fb19f37b6f9f375174 https://www.encodeproject.org/files/ENCFF605TOA/@@download/ENCFF605TOA.bigBed GRCh38 released mixed read lengths, mild to moderate bottlenecking biological replicates with identical biosample insufficient read length, control insufficient read depth, insufficient read depth missing control alignments ENCFF167WUZ bed narrowPeak optimal idr thresholded peaks ENCSR000EZT ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute JUN-human ENCAB000AER DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF144QMS, ENCFF291UMT, ENCFF419RSJ, ENCFF563FUW 149656 ENCODE Processing Pipeline 12397850a41177f618070e26e9e89d28 https://www.encodeproject.org/files/ENCFF167WUZ/@@download/ENCFF167WUZ.bed.gz GRCh38 released mixed read lengths, mild to moderate bottlenecking biological replicates with identical biosample insufficient read length, control insufficient read depth, insufficient read depth missing control alignments ENCFF878NLC bigBed narrowPeak peaks ENCSR000EZT ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute JUN-human ENCAB000AER DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF291UMT 9959711 ENCODE Processing Pipeline 234c36da9d968325506fd1f644ddf322 https://www.encodeproject.org/files/ENCFF878NLC/@@download/ENCFF878NLC.bigBed GRCh38 released mixed read lengths, mild to moderate bottlenecking biological replicates with identical biosample insufficient read length, control insufficient read depth, insufficient read depth missing control alignments ENCFF978GBP bam alignments ENCSR000EZT ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute JUN-human ENCAB000AER DNA see document see document False 2011-10-29 ENCODE 1 27 ENCFF000YPL, ENCFF807MUK 302528563 ENCODE Processing Pipeline 02752d4c5a8dec46e16c4f18ecab1e33 https://www.encodeproject.org/files/ENCFF978GBP/@@download/ENCFF978GBP.bam hg19 released mixed read lengths, mild to moderate bottlenecking biological replicates with identical biosample insufficient read length, control insufficient read depth, insufficient read depth missing control alignments ENCFF195OTC bam unfiltered alignments ENCSR000EZT ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute JUN-human ENCAB000AER DNA see document see document False 2011-10-29 ENCODE 2 27 ENCFF000YPN, ENCFF807MUK 779891636 ENCODE Processing Pipeline e59268cb6cb58250d82324972780bd0b https://www.encodeproject.org/files/ENCFF195OTC/@@download/ENCFF195OTC.bam hg19 released mixed read lengths, mild to moderate bottlenecking biological replicates with identical biosample insufficient read length, control insufficient read depth, insufficient read depth missing control alignments ENCFF470BTW bam unfiltered alignments ENCSR000EZT ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute JUN-human ENCAB000AER DNA see document see document False 2011-10-29 ENCODE 1 27 ENCFF000YPL, ENCFF807MUK 706831141 ENCODE Processing Pipeline ab41ae99ed02ba5ef6551d6045d7c4e9 https://www.encodeproject.org/files/ENCFF470BTW/@@download/ENCFF470BTW.bam hg19 released mixed read lengths, mild to moderate bottlenecking biological replicates with identical biosample insufficient read length, control insufficient read depth, insufficient read depth missing control alignments ENCFF994JIB bam alignments ENCSR000EZT ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute JUN-human ENCAB000AER DNA see document see document False 2011-10-29 ENCODE 2 27 ENCFF000YPN, ENCFF807MUK 261655045 ENCODE Processing Pipeline 817ca21655b5c7ff92ac16060107d51c https://www.encodeproject.org/files/ENCFF994JIB/@@download/ENCFF994JIB.bam hg19 released mixed read lengths, mild to moderate bottlenecking biological replicates with identical biosample insufficient read length, control insufficient read depth, insufficient read depth missing control alignments ENCFF680GIW bigWig signal p-value ENCSR000EZT ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute JUN-human ENCAB000AER DNA see document see document False 2011-10-29 ENCODE 1 ENCFF287WTN, ENCFF978GBP 226823738 ENCODE Processing Pipeline ee70a65dc76e8cdc56d3bcf67c31adca https://www.encodeproject.org/files/ENCFF680GIW/@@download/ENCFF680GIW.bigWig hg19 released mixed read lengths, mild to moderate bottlenecking biological replicates with identical biosample insufficient read length, control insufficient read depth, insufficient read depth missing control alignments ENCFF616IHP bigWig fold change over control ENCSR000EZT ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute JUN-human ENCAB000AER DNA see document see document False 2011-10-29 ENCODE 1 ENCFF287WTN, ENCFF978GBP 129246807 ENCODE Processing Pipeline 5d254ae7552767753982d37f0a27fb59 https://www.encodeproject.org/files/ENCFF616IHP/@@download/ENCFF616IHP.bigWig hg19 released mixed read lengths, mild to moderate bottlenecking biological replicates with identical biosample insufficient read length, control insufficient read depth, insufficient read depth missing control alignments ENCFF226ZMG bigWig signal p-value ENCSR000EZT ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute JUN-human ENCAB000AER DNA see document see document False 2011-10-29 ENCODE 2 ENCFF287WTN, ENCFF994JIB 179415425 ENCODE Processing Pipeline 8fc26499715ecd258573591001b48d67 https://www.encodeproject.org/files/ENCFF226ZMG/@@download/ENCFF226ZMG.bigWig hg19 released mixed read lengths, mild to moderate bottlenecking biological replicates with identical biosample insufficient read length, control insufficient read depth, insufficient read depth missing control alignments ENCFF015QFT bed narrowPeak conservative idr thresholded peaks ENCSR000EZT ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute JUN-human ENCAB000AER DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF001TDO, ENCFF076VIZ, ENCFF646NDI, ENCFF711IWR 130984 ENCODE Processing Pipeline ce0630e16c9b57d2a0cacf6fa3dd4b21 https://www.encodeproject.org/files/ENCFF015QFT/@@download/ENCFF015QFT.bed.gz hg19 released mixed read lengths, mild to moderate bottlenecking biological replicates with identical biosample insufficient read length, control insufficient read depth, insufficient read depth missing control alignments ENCFF893MAK bigBed narrowPeak optimal idr thresholded peaks ENCSR000EZT ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute JUN-human ENCAB000AER DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF417QAJ 328995 ENCODE Processing Pipeline 7af9ad799f2b70198294fa2236c09ba6 https://www.encodeproject.org/files/ENCFF893MAK/@@download/ENCFF893MAK.bigBed hg19 released mixed read lengths, mild to moderate bottlenecking biological replicates with identical biosample insufficient read length, control insufficient read depth, insufficient read depth missing control alignments ENCFF083IAS bigWig signal p-value ENCSR000EZT ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute JUN-human ENCAB000AER DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF287WTN, ENCFF978GBP, ENCFF994JIB 237165287 ENCODE Processing Pipeline 1f9ff7587b690e6380e3d709f4b6930d https://www.encodeproject.org/files/ENCFF083IAS/@@download/ENCFF083IAS.bigWig hg19 released mixed read lengths, mild to moderate bottlenecking biological replicates with identical biosample insufficient read length, control insufficient read depth, insufficient read depth missing control alignments ENCFF417QAJ bed narrowPeak optimal idr thresholded peaks ENCSR000EZT ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute JUN-human ENCAB000AER DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF001TDO, ENCFF076VIZ, ENCFF646NDI, ENCFF711IWR 149199 ENCODE Processing Pipeline 238b9e00469f275659c398777dc0f553 https://www.encodeproject.org/files/ENCFF417QAJ/@@download/ENCFF417QAJ.bed.gz hg19 released mixed read lengths, mild to moderate bottlenecking biological replicates with identical biosample insufficient read length, control insufficient read depth, insufficient read depth missing control alignments ENCFF137HFG bigWig fold change over control ENCSR000EZT ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute JUN-human ENCAB000AER DNA see document see document False 2011-10-29 ENCODE 2 ENCFF287WTN, ENCFF994JIB 113682859 ENCODE Processing Pipeline 0e9045552b4ffe8570b7b0833fb806cb https://www.encodeproject.org/files/ENCFF137HFG/@@download/ENCFF137HFG.bigWig hg19 released mixed read lengths, mild to moderate bottlenecking biological replicates with identical biosample insufficient read length, control insufficient read depth, insufficient read depth missing control alignments ENCFF018IAE bigBed narrowPeak peaks ENCSR000EZT ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute JUN-human ENCAB000AER DNA see document see document False 2011-10-29 ENCODE 1 ENCFF711IWR 4391507 ENCODE Processing Pipeline f60f786d9df46198cee71dc3a069e4e8 https://www.encodeproject.org/files/ENCFF018IAE/@@download/ENCFF018IAE.bigBed hg19 released mixed read lengths, mild to moderate bottlenecking biological replicates with identical biosample insufficient read length, control insufficient read depth, insufficient read depth missing control alignments ENCFF391YGQ bigBed narrowPeak peaks ENCSR000EZT ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute JUN-human ENCAB000AER DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF076VIZ 9945066 ENCODE Processing Pipeline b9d2949ffeb6d0d529aace5bb6ed9672 https://www.encodeproject.org/files/ENCFF391YGQ/@@download/ENCFF391YGQ.bigBed hg19 released mixed read lengths, mild to moderate bottlenecking biological replicates with identical biosample insufficient read length, control insufficient read depth, insufficient read depth missing control alignments ENCFF697HHX bigWig fold change over control ENCSR000EZT ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute JUN-human ENCAB000AER DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF287WTN, ENCFF978GBP, ENCFF994JIB 217649619 ENCODE Processing Pipeline dcbd1fa73a6fbc6ca47cd97e6b6d6da1 https://www.encodeproject.org/files/ENCFF697HHX/@@download/ENCFF697HHX.bigWig hg19 released mixed read lengths, mild to moderate bottlenecking biological replicates with identical biosample insufficient read length, control insufficient read depth, insufficient read depth missing control alignments ENCFF202JEL bigBed narrowPeak peaks ENCSR000EZT ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute JUN-human ENCAB000AER DNA see document see document False 2011-10-29 ENCODE 2 ENCFF646NDI 4111030 ENCODE Processing Pipeline 7dadd6ffc8d9b41aa5b4ed61ba47ac7f https://www.encodeproject.org/files/ENCFF202JEL/@@download/ENCFF202JEL.bigBed hg19 released mixed read lengths, mild to moderate bottlenecking biological replicates with identical biosample insufficient read length, control insufficient read depth, insufficient read depth missing control alignments ENCFF711IWR bed narrowPeak peaks ENCSR000EZT ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute JUN-human ENCAB000AER DNA see document see document False 2011-10-29 ENCODE 1 ENCFF287WTN, ENCFF978GBP 2129248 ENCODE Processing Pipeline 6544a6b0ba76e1f622f6e2ca2b5b305d https://www.encodeproject.org/files/ENCFF711IWR/@@download/ENCFF711IWR.bed.gz hg19 released mixed read lengths, mild to moderate bottlenecking biological replicates with identical biosample insufficient read length, control insufficient read depth, insufficient read depth missing control alignments ENCFF646NDI bed narrowPeak peaks ENCSR000EZT ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute JUN-human ENCAB000AER DNA see document see document False 2011-10-29 ENCODE 2 ENCFF287WTN, ENCFF994JIB 1968931 ENCODE Processing Pipeline 8fa53b70dea97ab361bb124c40ed951e https://www.encodeproject.org/files/ENCFF646NDI/@@download/ENCFF646NDI.bed.gz hg19 released mixed read lengths, mild to moderate bottlenecking biological replicates with identical biosample insufficient read length, control insufficient read depth, insufficient read depth missing control alignments ENCFF076VIZ bed narrowPeak peaks ENCSR000EZT ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute JUN-human ENCAB000AER DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF287WTN, ENCFF978GBP, ENCFF994JIB 4186013 ENCODE Processing Pipeline 26d16f09cf95235c9957076f45ddb7ac https://www.encodeproject.org/files/ENCFF076VIZ/@@download/ENCFF076VIZ.bed.gz hg19 released mixed read lengths, mild to moderate bottlenecking biological replicates with identical biosample insufficient read length, control insufficient read depth, insufficient read depth missing control alignments ENCFF505NKO bigBed narrowPeak conservative idr thresholded peaks ENCSR000EZT ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute JUN-human ENCAB000AER DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF015QFT 248870 ENCODE Processing Pipeline c0a275b45b6f89f28088d4221a94b574 https://www.encodeproject.org/files/ENCFF505NKO/@@download/ENCFF505NKO.bigBed hg19 released mixed read lengths, mild to moderate bottlenecking biological replicates with identical biosample insufficient read length, control insufficient read depth, insufficient read depth missing control alignments ENCFF000ZAD bam alignments ENCSR000EHJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 1 ENCFF000ZAQ 381452786 Michael Snyder, Stanford 03043015aa2ff95c3b9544136d284e46 https://www.encodeproject.org/files/ENCFF000ZAD/@@download/ENCFF000ZAD.bam hg19 archived mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF000ZAF bam alignments ENCSR000EHJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 2 ENCFF000ZAR 661654647 Michael Snyder, Stanford 7334042cc054fa6705bde2c98d08b642 https://www.encodeproject.org/files/ENCFF000ZAF/@@download/ENCFF000ZAF.bam hg19 archived mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF000ZAG bigBed narrowPeak peaks ENCSR000EHJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE ENCFF001VOW 99416 Michael Snyder, Stanford 34a57d8a2db39312e1f74dc67f2c5173 https://www.encodeproject.org/files/ENCFF000ZAG/@@download/ENCFF000ZAG.bigBed hg19 archived mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF000ZAH bigWig signal ENCSR000EHJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 343360728 Michael Snyder, Stanford 56d776e5b3b09f039c3db9831cbc9a2e https://www.encodeproject.org/files/ENCFF000ZAH/@@download/ENCFF000ZAH.bigWig hg19 archived mixed read lengths, control low read depth biological replicates with identical biosample, missing derived_from insufficient read length, insufficient read depth ENCFF000ZAQ fastq reads ENCSR000EHJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 1 1 27 single-ended 287143575 Michael Snyder, Stanford 259e23279b9994ba20165a0bb89c7116 https://www.encodeproject.org/files/ENCFF000ZAQ/@@download/ENCFF000ZAQ.fastq.gz Illumina Genome Analyzer /files/ENCFF000YPZ/ released mixed read lengths, control low read depth, inconsistent control read length biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF000ZAR fastq reads ENCSR000EHJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 2 1 34 single-ended 517004442 Michael Snyder, Stanford e36813556038df251fb56f0f482a9623 https://www.encodeproject.org/files/ENCFF000ZAR/@@download/ENCFF000ZAR.fastq.gz Illumina Genome Analyzer /files/ENCFF000YPZ/ released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF001VOW bed narrowPeak peaks ENCSR000EHJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 18033 Michael Snyder, Stanford e083514337ac09f22ea264e17f22c278 https://www.encodeproject.org/files/ENCFF001VOW/@@download/ENCFF001VOW.bed.gz hg19 archived mixed read lengths, control low read depth biological replicates with identical biosample, missing derived_from insufficient read length, insufficient read depth ENCFF002CYE bed narrowPeak optimal idr thresholded peaks ENCSR000EHJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 48537 ENCODE Consortium Analysis Working Group 199b233a57914bd4ff8cd80e03ae96bc https://www.encodeproject.org/files/ENCFF002CYE/@@download/ENCFF002CYE.bed.gz hg19 archived mixed read lengths, control low read depth biological replicates with identical biosample, missing derived_from insufficient read length, insufficient read depth ENCFF404RDA bigBed narrowPeak optimal idr thresholded peaks ENCSR000EHJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE ENCFF002CYE 133145 ENCODE Consortium af6547755f81fa402b73ccff46ccb05a https://www.encodeproject.org/files/ENCFF404RDA/@@download/ENCFF404RDA.bigBed hg19 archived mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF972AUH bam alignments ENCSR000EHJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 1 27 ENCFF000ZAQ, ENCFF807MUK 235286184 ENCODE Processing Pipeline 5d5f858a0b36798f165a0fac4b6981e1 https://www.encodeproject.org/files/ENCFF972AUH/@@download/ENCFF972AUH.bam hg19 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF860EJH bam unfiltered alignments ENCSR000EHJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 1 27 ENCFF000ZAQ, ENCFF807MUK 381929181 ENCODE Processing Pipeline 3ead6e18a72665d7bccb7fcafa7eccb8 https://www.encodeproject.org/files/ENCFF860EJH/@@download/ENCFF860EJH.bam hg19 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF663MAR bam unfiltered alignments ENCSR000EHJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 1 27 ENCFF000ZAQ, ENCFF643CGH 382787875 ENCODE Processing Pipeline 9637ac329c6aadba9e669b169f0477a9 https://www.encodeproject.org/files/ENCFF663MAR/@@download/ENCFF663MAR.bam GRCh38 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF533MWQ bam unfiltered alignments ENCSR000EHJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 2 27 ENCFF000ZAR, ENCFF643CGH 603863344 ENCODE Processing Pipeline 3fbad3616db1165020908ddaa9bda594 https://www.encodeproject.org/files/ENCFF533MWQ/@@download/ENCFF533MWQ.bam GRCh38 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF173MEF bam alignments ENCSR000EHJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 1 27 ENCFF000ZAQ, ENCFF643CGH 234952826 ENCODE Processing Pipeline b6a928e5c745bba4f39e3d5929348316 https://www.encodeproject.org/files/ENCFF173MEF/@@download/ENCFF173MEF.bam GRCh38 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF041UWI bam alignments ENCSR000EHJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 2 27 ENCFF000ZAR, ENCFF643CGH 299736100 ENCODE Processing Pipeline dc4f9613aa0ff67442271bd4f2abba35 https://www.encodeproject.org/files/ENCFF041UWI/@@download/ENCFF041UWI.bam GRCh38 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF298LEE bam unfiltered alignments ENCSR000EHJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 2 27 ENCFF000ZAR, ENCFF807MUK 602574907 ENCODE Processing Pipeline 098f707bfc52314a41c9033729dc9797 https://www.encodeproject.org/files/ENCFF298LEE/@@download/ENCFF298LEE.bam hg19 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF113JSN bam alignments ENCSR000EHJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 2 27 ENCFF000ZAR, ENCFF807MUK 300165456 ENCODE Processing Pipeline 7821d7dc466977211bfb0cb7b00648f2 https://www.encodeproject.org/files/ENCFF113JSN/@@download/ENCFF113JSN.bam hg19 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF719OWC bigWig signal p-value ENCSR000EHJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 1 ENCFF331ARQ, ENCFF972AUH 256594434 ENCODE Processing Pipeline 1777802ad7a5935e21975bb81259d3bd https://www.encodeproject.org/files/ENCFF719OWC/@@download/ENCFF719OWC.bigWig hg19 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF701RAL bigWig signal p-value ENCSR000EHJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 2 ENCFF113JSN, ENCFF331ARQ 250295652 ENCODE Processing Pipeline 32c2b914251c5a544a74c4987d3e7d40 https://www.encodeproject.org/files/ENCFF701RAL/@@download/ENCFF701RAL.bigWig hg19 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF646MGQ bigWig fold change over control ENCSR000EHJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 1 ENCFF331ARQ, ENCFF972AUH 112968642 ENCODE Processing Pipeline 4820b32fc994d8bdc8bddeed90b9144b https://www.encodeproject.org/files/ENCFF646MGQ/@@download/ENCFF646MGQ.bigWig hg19 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF600DEI bigWig fold change over control ENCSR000EHJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 2 ENCFF113JSN, ENCFF331ARQ 137570726 ENCODE Processing Pipeline 396b7073463e908acf0426e0d71c4e5f https://www.encodeproject.org/files/ENCFF600DEI/@@download/ENCFF600DEI.bigWig hg19 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF922XOB bigWig signal p-value ENCSR000EHJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF113JSN, ENCFF331ARQ, ENCFF972AUH 269742317 ENCODE Processing Pipeline 6412f7c0583c9b790a1b6607e10a89e6 https://www.encodeproject.org/files/ENCFF922XOB/@@download/ENCFF922XOB.bigWig hg19 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF985QWF bigWig fold change over control ENCSR000EHJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF113JSN, ENCFF331ARQ, ENCFF972AUH 227488329 ENCODE Processing Pipeline 767376e72727985653cd24c65a6b414a https://www.encodeproject.org/files/ENCFF985QWF/@@download/ENCFF985QWF.bigWig hg19 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF797EKN bed narrowPeak peaks ENCSR000EHJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 2 ENCFF113JSN, ENCFF331ARQ 3236176 ENCODE Processing Pipeline 07b93e0a5afac38587f86032ead1a9d2 https://www.encodeproject.org/files/ENCFF797EKN/@@download/ENCFF797EKN.bed.gz hg19 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF947WYS bed narrowPeak peaks ENCSR000EHJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 1 ENCFF331ARQ, ENCFF972AUH 1865185 ENCODE Processing Pipeline 448a218d0b8b82117f2a236becd6d1c4 https://www.encodeproject.org/files/ENCFF947WYS/@@download/ENCFF947WYS.bed.gz hg19 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF473ULH bed narrowPeak peaks ENCSR000EHJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF113JSN, ENCFF331ARQ, ENCFF972AUH 4609370 ENCODE Processing Pipeline 59b892a9b152e624fb0865052d1ab77c https://www.encodeproject.org/files/ENCFF473ULH/@@download/ENCFF473ULH.bed.gz hg19 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF063HDC bigBed narrowPeak peaks ENCSR000EHJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 2 ENCFF797EKN 7500083 ENCODE Processing Pipeline 83b55eb28025e36284ce34810ea76698 https://www.encodeproject.org/files/ENCFF063HDC/@@download/ENCFF063HDC.bigBed hg19 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF825FIW bigBed narrowPeak peaks ENCSR000EHJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF473ULH 10305834 ENCODE Processing Pipeline 41ebc2faa2bceb2d2f783583c1db9ee7 https://www.encodeproject.org/files/ENCFF825FIW/@@download/ENCFF825FIW.bigBed hg19 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF452VIZ bigBed narrowPeak peaks ENCSR000EHJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 1 ENCFF947WYS 3899441 ENCODE Processing Pipeline 6f428de95dc5bb2c91e1397af634991a https://www.encodeproject.org/files/ENCFF452VIZ/@@download/ENCFF452VIZ.bigBed hg19 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF964OWK bed narrowPeak conservative idr thresholded peaks ENCSR000EHJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF001TDO, ENCFF473ULH, ENCFF797EKN, ENCFF947WYS 42073 ENCODE Processing Pipeline a16cbb7d4af4f373bfeb48e9baa3c968 https://www.encodeproject.org/files/ENCFF964OWK/@@download/ENCFF964OWK.bed.gz hg19 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF648NYF bed narrowPeak optimal idr thresholded peaks ENCSR000EHJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF001TDO, ENCFF473ULH, ENCFF797EKN, ENCFF947WYS 49746 ENCODE Processing Pipeline 2a8c734f74b99e36c8be46d2216ac62e https://www.encodeproject.org/files/ENCFF648NYF/@@download/ENCFF648NYF.bed.gz hg19 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF422ZPX bigBed narrowPeak optimal idr thresholded peaks ENCSR000EHJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF648NYF 136485 ENCODE Processing Pipeline b39eeac49b21f434e94fe1689f3b65c4 https://www.encodeproject.org/files/ENCFF422ZPX/@@download/ENCFF422ZPX.bigBed hg19 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF397VRL bigBed narrowPeak conservative idr thresholded peaks ENCSR000EHJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF964OWK 125604 ENCODE Processing Pipeline 01d9fa13ac77433eacb9ed4fbd846b98 https://www.encodeproject.org/files/ENCFF397VRL/@@download/ENCFF397VRL.bigBed hg19 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF772JAO bigWig signal p-value ENCSR000EHJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF041UWI, ENCFF173MEF, ENCFF482LDC 269392973 ENCODE Processing Pipeline cd4b225fe7e3b3b5503cfd7b84631110 https://www.encodeproject.org/files/ENCFF772JAO/@@download/ENCFF772JAO.bigWig GRCh38 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF019AZV bigBed narrowPeak peaks ENCSR000EHJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 2 ENCFF423LHI 7483166 ENCODE Processing Pipeline 3142e07a6f4f4cdfaf83cafbf62ddd13 https://www.encodeproject.org/files/ENCFF019AZV/@@download/ENCFF019AZV.bigBed GRCh38 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF229WAI bigWig signal p-value ENCSR000EHJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 1 ENCFF173MEF, ENCFF482LDC 239377962 ENCODE Processing Pipeline 88ec47cd35ba7301da979dc73287be7a https://www.encodeproject.org/files/ENCFF229WAI/@@download/ENCFF229WAI.bigWig GRCh38 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF445OFU bigWig fold change over control ENCSR000EHJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 1 ENCFF173MEF, ENCFF482LDC 108917765 ENCODE Processing Pipeline 53a3736b81ac0c699b397ff2919e8f12 https://www.encodeproject.org/files/ENCFF445OFU/@@download/ENCFF445OFU.bigWig GRCh38 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF431NLF bed narrowPeak optimal idr thresholded peaks ENCSR000EHJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF020PTC, ENCFF168GOT, ENCFF419RSJ, ENCFF423LHI 49074 ENCODE Processing Pipeline 348d81f4c05a13fc0c9e4e08cb1285a4 https://www.encodeproject.org/files/ENCFF431NLF/@@download/ENCFF431NLF.bed.gz GRCh38 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF168GOT bed narrowPeak peaks ENCSR000EHJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 1 ENCFF173MEF, ENCFF482LDC 1870121 ENCODE Processing Pipeline f5dde80dbcf0f38c8e837cc4c6bd02ac https://www.encodeproject.org/files/ENCFF168GOT/@@download/ENCFF168GOT.bed.gz GRCh38 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF456PYB bigWig signal p-value ENCSR000EHJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 2 ENCFF041UWI, ENCFF482LDC 250337257 ENCODE Processing Pipeline efc78fa57aed3f7b885954786eb22ee9 https://www.encodeproject.org/files/ENCFF456PYB/@@download/ENCFF456PYB.bigWig GRCh38 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF239YBG bigWig fold change over control ENCSR000EHJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 2 ENCFF041UWI, ENCFF482LDC 133500334 ENCODE Processing Pipeline d8a7f84ae8b2da39fc758e79e3764dbb https://www.encodeproject.org/files/ENCFF239YBG/@@download/ENCFF239YBG.bigWig GRCh38 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF097REV bigWig fold change over control ENCSR000EHJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF041UWI, ENCFF173MEF, ENCFF482LDC 227830867 ENCODE Processing Pipeline cd26569eef63ff239e96a16ae4bbbce4 https://www.encodeproject.org/files/ENCFF097REV/@@download/ENCFF097REV.bigWig GRCh38 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF423LHI bed narrowPeak peaks ENCSR000EHJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 2 ENCFF041UWI, ENCFF482LDC 3227022 ENCODE Processing Pipeline 428c94be5cb50ab04d571cbb511ad558 https://www.encodeproject.org/files/ENCFF423LHI/@@download/ENCFF423LHI.bed.gz GRCh38 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF020PTC bed narrowPeak peaks ENCSR000EHJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF041UWI, ENCFF173MEF, ENCFF482LDC 4603925 ENCODE Processing Pipeline 54235281c105423ac8391229e8a45cd6 https://www.encodeproject.org/files/ENCFF020PTC/@@download/ENCFF020PTC.bed.gz GRCh38 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF205QNW bigBed narrowPeak peaks ENCSR000EHJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 1 ENCFF168GOT 3902705 ENCODE Processing Pipeline 96cade197373e30a7e75be74311fa404 https://www.encodeproject.org/files/ENCFF205QNW/@@download/ENCFF205QNW.bigBed GRCh38 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF272BTH bigBed narrowPeak conservative idr thresholded peaks ENCSR000EHJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF122XOC 126106 ENCODE Processing Pipeline 826b1cd07f3bb7b0f56d94944f310cdf https://www.encodeproject.org/files/ENCFF272BTH/@@download/ENCFF272BTH.bigBed GRCh38 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF343CHV bigBed narrowPeak optimal idr thresholded peaks ENCSR000EHJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF431NLF 135323 ENCODE Processing Pipeline f4dde23fa6dc7a47e3cfa08aa23a0c66 https://www.encodeproject.org/files/ENCFF343CHV/@@download/ENCFF343CHV.bigBed GRCh38 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF008GHD bigBed narrowPeak peaks ENCSR000EHJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF020PTC 10306060 ENCODE Processing Pipeline ba9d25763bd48b2c7ff3521efe3b31e6 https://www.encodeproject.org/files/ENCFF008GHD/@@download/ENCFF008GHD.bigBed GRCh38 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF122XOC bed narrowPeak conservative idr thresholded peaks ENCSR000EHJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF020PTC, ENCFF168GOT, ENCFF419RSJ, ENCFF423LHI 42453 ENCODE Processing Pipeline 1732613abe815d77f4c8285d0e43099f https://www.encodeproject.org/files/ENCFF122XOC/@@download/ENCFF122XOC.bed.gz GRCh38 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF581SXG bam unfiltered alignments ENCSR851BNE ChIP-seq EFO:0002067 K562 cell line Homo sapiens MEIS2-human ENCAB962CNL DNA False 2014-07-07 ENCODE 1 100 ENCFF002EIU, ENCFF002EIV, ENCFF807MUK 7923154466 ENCODE Processing Pipeline 1244a75b0f5003d55f15eb8e16553c68 https://www.encodeproject.org/files/ENCFF581SXG/@@download/ENCFF581SXG.bam hg19 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF215WVE bam unfiltered alignments ENCSR851BNE ChIP-seq EFO:0002067 K562 cell line Homo sapiens MEIS2-human ENCAB962CNL DNA False 2014-07-07 ENCODE 2 100 ENCFF002EIW, ENCFF002EIX, ENCFF807MUK 8524858275 ENCODE Processing Pipeline 5817f193bb49fa4bfe5cec38e4296537 https://www.encodeproject.org/files/ENCFF215WVE/@@download/ENCFF215WVE.bam hg19 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF002EIU fastq reads ENCSR851BNE ChIP-seq EFO:0002067 K562 cell line Homo sapiens MEIS2-human ENCAB962CNL DNA False 2014-07-07 ENCODE 1 1 100 paired-ended 1 ENCFF002EIV 3775496408 Michael Snyder, Stanford f631b6d67df779e77d2415a7acff49ea https://www.encodeproject.org/files/ENCFF002EIU/@@download/ENCFF002EIU.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFF/ released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF002EIV fastq reads ENCSR851BNE ChIP-seq EFO:0002067 K562 cell line Homo sapiens MEIS2-human ENCAB962CNL DNA False 2014-07-07 ENCODE 1 1 100 paired-ended 2 ENCFF002EIU 3839203805 Michael Snyder, Stanford 8421d3570acc6b44596c78b5d91bc85e https://www.encodeproject.org/files/ENCFF002EIV/@@download/ENCFF002EIV.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFH/ released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF002EIW fastq reads ENCSR851BNE ChIP-seq EFO:0002067 K562 cell line Homo sapiens MEIS2-human ENCAB962CNL DNA False 2014-07-07 ENCODE 2 1 100 paired-ended 1 ENCFF002EIX 3998964445 Michael Snyder, Stanford 50e4b47b323961c76f5a8c1c40e58ef3 https://www.encodeproject.org/files/ENCFF002EIW/@@download/ENCFF002EIW.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFD/ released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF002EIX fastq reads ENCSR851BNE ChIP-seq EFO:0002067 K562 cell line Homo sapiens MEIS2-human ENCAB962CNL DNA False 2014-07-07 ENCODE 2 1 100 paired-ended 2 ENCFF002EIW 4074120371 Michael Snyder, Stanford 6994222e9a21a9f4eaa8c1507772c447 https://www.encodeproject.org/files/ENCFF002EIX/@@download/ENCFF002EIX.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFA/ released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF456BBA bam alignments ENCSR851BNE ChIP-seq EFO:0002067 K562 cell line Homo sapiens MEIS2-human ENCAB962CNL DNA False 2014-07-07 ENCODE 2 100 ENCFF002EIW, ENCFF002EIX, ENCFF807MUK 7563628180 ENCODE Processing Pipeline 681aa4751094ee3a8a9ab42e6a82277d https://www.encodeproject.org/files/ENCFF456BBA/@@download/ENCFF456BBA.bam hg19 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF608THC bam alignments ENCSR851BNE ChIP-seq EFO:0002067 K562 cell line Homo sapiens MEIS2-human ENCAB962CNL DNA False 2014-07-07 ENCODE 1 100 ENCFF002EIU, ENCFF002EIV, ENCFF807MUK 6472081985 ENCODE Processing Pipeline d6d1eeaac1c7fb5c2f5c973e0cb10d7e https://www.encodeproject.org/files/ENCFF608THC/@@download/ENCFF608THC.bam hg19 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF556VYH bigWig signal p-value ENCSR851BNE ChIP-seq EFO:0002067 K562 cell line Homo sapiens MEIS2-human ENCAB962CNL DNA False 2014-07-07 ENCODE 2 ENCFF051LWI, ENCFF456BBA, ENCFF581ZJL 1745755909 ENCODE Processing Pipeline 967dbeda83ae457fb9133b8f5d788e7b https://www.encodeproject.org/files/ENCFF556VYH/@@download/ENCFF556VYH.bigWig hg19 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF882BBZ bigWig fold change over control ENCSR851BNE ChIP-seq EFO:0002067 K562 cell line Homo sapiens MEIS2-human ENCAB962CNL DNA False 2014-07-07 ENCODE 2 ENCFF051LWI, ENCFF456BBA, ENCFF581ZJL 2004335884 ENCODE Processing Pipeline 9c463a450efefe9a95ad8e17ee635b0d https://www.encodeproject.org/files/ENCFF882BBZ/@@download/ENCFF882BBZ.bigWig hg19 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF697BKG bed narrowPeak peaks ENCSR851BNE ChIP-seq EFO:0002067 K562 cell line Homo sapiens MEIS2-human ENCAB962CNL DNA False 2014-07-07 ENCODE 2 ENCFF051LWI, ENCFF456BBA, ENCFF581ZJL 7101030 ENCODE Processing Pipeline 54492898f66cce12a1e6588aa57d738d https://www.encodeproject.org/files/ENCFF697BKG/@@download/ENCFF697BKG.bed.gz hg19 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF447BCK bigWig fold change over control ENCSR851BNE ChIP-seq EFO:0002067 K562 cell line Homo sapiens MEIS2-human ENCAB962CNL DNA False 2014-07-07 ENCODE 1, 2 ENCFF051LWI, ENCFF456BBA, ENCFF581ZJL, ENCFF608THC 2509377832 ENCODE Processing Pipeline 0b2da485d9fa49876f557b6885eeb441 https://www.encodeproject.org/files/ENCFF447BCK/@@download/ENCFF447BCK.bigWig hg19 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF327DRE bed narrowPeak peaks ENCSR851BNE ChIP-seq EFO:0002067 K562 cell line Homo sapiens MEIS2-human ENCAB962CNL DNA False 2014-07-07 ENCODE 1, 2 ENCFF051LWI, ENCFF456BBA, ENCFF581ZJL, ENCFF608THC 7203601 ENCODE Processing Pipeline 6efffd3e2107e1279cf8de7e9722011f https://www.encodeproject.org/files/ENCFF327DRE/@@download/ENCFF327DRE.bed.gz hg19 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF248AQP bigWig fold change over control ENCSR851BNE ChIP-seq EFO:0002067 K562 cell line Homo sapiens MEIS2-human ENCAB962CNL DNA False 2014-07-07 ENCODE 1 ENCFF581ZJL, ENCFF608THC 1470316891 ENCODE Processing Pipeline 99ee2a40d2d3f1e6c27c4df71f4d3282 https://www.encodeproject.org/files/ENCFF248AQP/@@download/ENCFF248AQP.bigWig hg19 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF173NFG bigWig signal p-value ENCSR851BNE ChIP-seq EFO:0002067 K562 cell line Homo sapiens MEIS2-human ENCAB962CNL DNA False 2014-07-07 ENCODE 1 ENCFF581ZJL, ENCFF608THC 1238186125 ENCODE Processing Pipeline f84b8f32a7d10ec27bb6a8d8196b5dbd https://www.encodeproject.org/files/ENCFF173NFG/@@download/ENCFF173NFG.bigWig hg19 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF752QWH bigWig signal p-value ENCSR851BNE ChIP-seq EFO:0002067 K562 cell line Homo sapiens MEIS2-human ENCAB962CNL DNA False 2014-07-07 ENCODE 1, 2 ENCFF051LWI, ENCFF456BBA, ENCFF581ZJL, ENCFF608THC 2411898587 ENCODE Processing Pipeline 070672ad981e9ac64bd1d3fc07081bf3 https://www.encodeproject.org/files/ENCFF752QWH/@@download/ENCFF752QWH.bigWig hg19 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF916GOF bigBed narrowPeak peaks ENCSR851BNE ChIP-seq EFO:0002067 K562 cell line Homo sapiens MEIS2-human ENCAB962CNL DNA False 2014-07-07 ENCODE 1 ENCFF509UMD 13596631 ENCODE Processing Pipeline 4089b006f24153d993a210f2399f0311 https://www.encodeproject.org/files/ENCFF916GOF/@@download/ENCFF916GOF.bigBed hg19 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF414TSG bigBed narrowPeak peaks ENCSR851BNE ChIP-seq EFO:0002067 K562 cell line Homo sapiens MEIS2-human ENCAB962CNL DNA False 2014-07-07 ENCODE 1, 2 ENCFF327DRE 13669247 ENCODE Processing Pipeline 81b3b168533af44b11e6f710f0f3f5c4 https://www.encodeproject.org/files/ENCFF414TSG/@@download/ENCFF414TSG.bigBed hg19 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF509UMD bed narrowPeak peaks ENCSR851BNE ChIP-seq EFO:0002067 K562 cell line Homo sapiens MEIS2-human ENCAB962CNL DNA False 2014-07-07 ENCODE 1 ENCFF581ZJL, ENCFF608THC 7038268 ENCODE Processing Pipeline 5859ca935cf7cdbc7c84003370d4dc9e https://www.encodeproject.org/files/ENCFF509UMD/@@download/ENCFF509UMD.bed.gz hg19 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF201RKQ bigBed narrowPeak peaks ENCSR851BNE ChIP-seq EFO:0002067 K562 cell line Homo sapiens MEIS2-human ENCAB962CNL DNA False 2014-07-07 ENCODE 2 ENCFF697BKG 11342590 ENCODE Processing Pipeline 8ee3072eb3df985b2e9f651d0d56ef95 https://www.encodeproject.org/files/ENCFF201RKQ/@@download/ENCFF201RKQ.bigBed hg19 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF408TXM bam unfiltered alignments ENCSR851BNE ChIP-seq EFO:0002067 K562 cell line Homo sapiens MEIS2-human ENCAB962CNL DNA False 2014-07-07 ENCODE 1 100 ENCFF002EIU, ENCFF002EIV, ENCFF643CGH 7931589266 ENCODE Processing Pipeline 2d993278a314f6659614b77a6b355a49 https://www.encodeproject.org/files/ENCFF408TXM/@@download/ENCFF408TXM.bam GRCh38 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF307ONI bam unfiltered alignments ENCSR851BNE ChIP-seq EFO:0002067 K562 cell line Homo sapiens MEIS2-human ENCAB962CNL DNA False 2014-07-07 ENCODE 2 100 ENCFF002EIW, ENCFF002EIX, ENCFF643CGH 8536690296 ENCODE Processing Pipeline 19d4cdb3633627c09989cc3194f60671 https://www.encodeproject.org/files/ENCFF307ONI/@@download/ENCFF307ONI.bam GRCh38 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF796CGI bam alignments ENCSR851BNE ChIP-seq EFO:0002067 K562 cell line Homo sapiens MEIS2-human ENCAB962CNL DNA False 2014-07-07 ENCODE 1 100 ENCFF002EIU, ENCFF002EIV, ENCFF643CGH 6472876511 ENCODE Processing Pipeline c3784f1d5be0cfc895efa7cba3919ba0 https://www.encodeproject.org/files/ENCFF796CGI/@@download/ENCFF796CGI.bam GRCh38 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF031GGC bam alignments ENCSR851BNE ChIP-seq EFO:0002067 K562 cell line Homo sapiens MEIS2-human ENCAB962CNL DNA False 2014-07-07 ENCODE 2 100 ENCFF002EIW, ENCFF002EIX, ENCFF643CGH 7566410339 ENCODE Processing Pipeline be85a06ddf2207aa072769ddb0558b57 https://www.encodeproject.org/files/ENCFF031GGC/@@download/ENCFF031GGC.bam GRCh38 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF866QIN bigWig signal p-value ENCSR851BNE ChIP-seq EFO:0002067 K562 cell line Homo sapiens MEIS2-human ENCAB962CNL DNA False 2014-07-07 ENCODE 1 ENCFF796CGI 1251154684 ENCODE Processing Pipeline 9c05259f3427000a07f772b41055361a https://www.encodeproject.org/files/ENCFF866QIN/@@download/ENCFF866QIN.bigWig GRCh38 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF785NEG bigWig signal p-value ENCSR851BNE ChIP-seq EFO:0002067 K562 cell line Homo sapiens MEIS2-human ENCAB962CNL DNA False 2014-07-07 ENCODE 2 ENCFF031GGC 1973180177 ENCODE Processing Pipeline 6739e1994028722c3985341892b7f5bf https://www.encodeproject.org/files/ENCFF785NEG/@@download/ENCFF785NEG.bigWig GRCh38 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF700LMU bigWig signal p-value ENCSR851BNE ChIP-seq EFO:0002067 K562 cell line Homo sapiens MEIS2-human ENCAB962CNL DNA False 2014-07-07 ENCODE 1, 2 ENCFF031GGC, ENCFF796CGI 2474345222 ENCODE Processing Pipeline 5512c353f87d86a5e9539079a670108c https://www.encodeproject.org/files/ENCFF700LMU/@@download/ENCFF700LMU.bigWig GRCh38 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF226YOU bigWig fold change over control ENCSR851BNE ChIP-seq EFO:0002067 K562 cell line Homo sapiens MEIS2-human ENCAB962CNL DNA False 2014-07-07 ENCODE 1 ENCFF796CGI 1472053188 ENCODE Processing Pipeline 188d7df6bba21531b28fbc5c922c3207 https://www.encodeproject.org/files/ENCFF226YOU/@@download/ENCFF226YOU.bigWig GRCh38 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF653GLC bigWig fold change over control ENCSR851BNE ChIP-seq EFO:0002067 K562 cell line Homo sapiens MEIS2-human ENCAB962CNL DNA False 2014-07-07 ENCODE 2 ENCFF031GGC 2004745675 ENCODE Processing Pipeline 13c884e9f41c7f2bd4fa085eb8c3033d https://www.encodeproject.org/files/ENCFF653GLC/@@download/ENCFF653GLC.bigWig GRCh38 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF454COM bed narrowPeak peaks ENCSR851BNE ChIP-seq EFO:0002067 K562 cell line Homo sapiens MEIS2-human ENCAB962CNL DNA False 2014-07-07 ENCODE 1 ENCFF796CGI 6886467 ENCODE Processing Pipeline e24399572315ad109b61ec672901855d https://www.encodeproject.org/files/ENCFF454COM/@@download/ENCFF454COM.bed.gz GRCh38 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF531RQL bed narrowPeak peaks ENCSR851BNE ChIP-seq EFO:0002067 K562 cell line Homo sapiens MEIS2-human ENCAB962CNL DNA False 2014-07-07 ENCODE 2 ENCFF031GGC 7083389 ENCODE Processing Pipeline d9150bec68466144b9460b9f5e09c795 https://www.encodeproject.org/files/ENCFF531RQL/@@download/ENCFF531RQL.bed.gz GRCh38 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF095UTS bigBed narrowPeak peaks ENCSR851BNE ChIP-seq EFO:0002067 K562 cell line Homo sapiens MEIS2-human ENCAB962CNL DNA False 2014-07-07 ENCODE 1 ENCFF454COM 13509882 ENCODE Processing Pipeline 698510c6a3b530dcb7a63c95c4bee919 https://www.encodeproject.org/files/ENCFF095UTS/@@download/ENCFF095UTS.bigBed GRCh38 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF965POF bigWig fold change over control ENCSR851BNE ChIP-seq EFO:0002067 K562 cell line Homo sapiens MEIS2-human ENCAB962CNL DNA False 2014-07-07 ENCODE 1, 2 ENCFF031GGC, ENCFF796CGI 2565976422 ENCODE Processing Pipeline 743411d305713619a0443ec702f39ca3 https://www.encodeproject.org/files/ENCFF965POF/@@download/ENCFF965POF.bigWig GRCh38 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF133AJO bed narrowPeak peaks ENCSR851BNE ChIP-seq EFO:0002067 K562 cell line Homo sapiens MEIS2-human ENCAB962CNL DNA False 2014-07-07 ENCODE 1, 2 ENCFF031GGC, ENCFF796CGI 7208478 ENCODE Processing Pipeline e871bbf70f367e986cc0045a399afb87 https://www.encodeproject.org/files/ENCFF133AJO/@@download/ENCFF133AJO.bed.gz GRCh38 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF605NBH bigBed narrowPeak peaks ENCSR851BNE ChIP-seq EFO:0002067 K562 cell line Homo sapiens MEIS2-human ENCAB962CNL DNA False 2014-07-07 ENCODE 2 ENCFF531RQL 11372684 ENCODE Processing Pipeline f9598c8a4135d57c9f1a920a72a28b0f https://www.encodeproject.org/files/ENCFF605NBH/@@download/ENCFF605NBH.bigBed GRCh38 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF023KAG bed narrowPeak conservative idr thresholded peaks ENCSR851BNE ChIP-seq EFO:0002067 K562 cell line Homo sapiens MEIS2-human ENCAB962CNL DNA False 2014-07-07 ENCODE 1, 2 ENCFF133AJO, ENCFF419RSJ, ENCFF454COM, ENCFF531RQL 741370 ENCODE Processing Pipeline 51e2b2ff7696a45094f6a9afbd0f4be6 https://www.encodeproject.org/files/ENCFF023KAG/@@download/ENCFF023KAG.bed.gz GRCh38 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF654RNS bigBed narrowPeak peaks ENCSR851BNE ChIP-seq EFO:0002067 K562 cell line Homo sapiens MEIS2-human ENCAB962CNL DNA False 2014-07-07 ENCODE 1, 2 ENCFF133AJO 13686427 ENCODE Processing Pipeline f754521dc975735cf64c7ae951625931 https://www.encodeproject.org/files/ENCFF654RNS/@@download/ENCFF654RNS.bigBed GRCh38 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF013GIT bigBed narrowPeak conservative idr thresholded peaks ENCSR851BNE ChIP-seq EFO:0002067 K562 cell line Homo sapiens MEIS2-human ENCAB962CNL DNA False 2014-07-07 ENCODE 1, 2 ENCFF023KAG 1517587 ENCODE Processing Pipeline 4e4b2d8f669fc0868ff4928de27f4888 https://www.encodeproject.org/files/ENCFF013GIT/@@download/ENCFF013GIT.bigBed GRCh38 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF462CSY bigBed narrowPeak optimal idr thresholded peaks ENCSR851BNE ChIP-seq EFO:0002067 K562 cell line Homo sapiens MEIS2-human ENCAB962CNL DNA False 2014-07-07 ENCODE 1, 2 ENCFF937UEE 1784523 ENCODE Processing Pipeline 927a4571c0cdc4ad92e0842209bd8bf3 https://www.encodeproject.org/files/ENCFF462CSY/@@download/ENCFF462CSY.bigBed GRCh38 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF937UEE bed narrowPeak optimal idr thresholded peaks ENCSR851BNE ChIP-seq EFO:0002067 K562 cell line Homo sapiens MEIS2-human ENCAB962CNL DNA False 2014-07-07 ENCODE 1, 2 ENCFF133AJO, ENCFF419RSJ, ENCFF454COM, ENCFF531RQL 918044 ENCODE Processing Pipeline a94e324de7bccb5c31a249ea71e77ec2 https://www.encodeproject.org/files/ENCFF937UEE/@@download/ENCFF937UEE.bed.gz GRCh38 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF678QHT bed narrowPeak conservative idr thresholded peaks ENCSR851BNE ChIP-seq EFO:0002067 K562 cell line Homo sapiens MEIS2-human ENCAB962CNL DNA False 2014-07-07 ENCODE 1, 2 ENCFF001TDO, ENCFF327DRE, ENCFF509UMD, ENCFF697BKG 676074 ENCODE Processing Pipeline f39b04bc51caae688b6649710d3362d4 https://www.encodeproject.org/files/ENCFF678QHT/@@download/ENCFF678QHT.bed.gz hg19 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF613RNG bed narrowPeak optimal idr thresholded peaks ENCSR851BNE ChIP-seq EFO:0002067 K562 cell line Homo sapiens MEIS2-human ENCAB962CNL DNA False 2014-07-07 ENCODE 1, 2 ENCFF001TDO, ENCFF327DRE, ENCFF509UMD, ENCFF697BKG 825829 ENCODE Processing Pipeline 5a8a7a2c1d04e8655631cd819f8e4127 https://www.encodeproject.org/files/ENCFF613RNG/@@download/ENCFF613RNG.bed.gz hg19 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF653KIC bigBed narrowPeak optimal idr thresholded peaks ENCSR851BNE ChIP-seq EFO:0002067 K562 cell line Homo sapiens MEIS2-human ENCAB962CNL DNA False 2014-07-07 ENCODE 1, 2 ENCFF613RNG 1631844 ENCODE Processing Pipeline 8b293065aab73571d3487e471ef7a13b https://www.encodeproject.org/files/ENCFF653KIC/@@download/ENCFF653KIC.bigBed hg19 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF706BPD bigBed narrowPeak conservative idr thresholded peaks ENCSR851BNE ChIP-seq EFO:0002067 K562 cell line Homo sapiens MEIS2-human ENCAB962CNL DNA False 2014-07-07 ENCODE 1, 2 ENCFF678QHT 1098556 ENCODE Processing Pipeline d76135c552d2e3a7950fb856cae7f50b https://www.encodeproject.org/files/ENCFF706BPD/@@download/ENCFF706BPD.bigBed hg19 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF843ZPR fastq reads ENCSR764OXF ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM39-human ENCAB975CWB DNA SDS formaldehyde False 2018-01-22 ENCODE 1 1 40 single-ended 829117829 Xiang-Dong Fu, UCSD 6eb31493bf4204835519de24591e4fc8 https://www.encodeproject.org/files/ENCFF843ZPR/@@download/ENCFF843ZPR.fastq.gz Illumina HiSeq 2500 /files/ENCFF025UQF/ released low read depth, low read length experiment not submitted to GEO missing control alignments ENCFF518CED fastq reads ENCSR764OXF ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM39-human ENCAB975CWB DNA SDS formaldehyde False 2018-01-22 ENCODE 2 1 40 single-ended 790885862 Xiang-Dong Fu, UCSD d4d8e6ad127ee6a1c2ec4c7fb2366371 https://www.encodeproject.org/files/ENCFF518CED/@@download/ENCFF518CED.fastq.gz Illumina HiSeq 2500 /files/ENCFF201ZVH/ released low read depth, low read length experiment not submitted to GEO missing control alignments ENCFF283FKG bam unfiltered alignments ENCSR764OXF ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM39-human ENCAB975CWB DNA SDS formaldehyde False 2018-01-22 ENCODE 2 40 ENCFF518CED, ENCFF807MUK 1090073596 ENCODE Processing Pipeline 415af3c99415a728625cb9d8bc6376c0 https://www.encodeproject.org/files/ENCFF283FKG/@@download/ENCFF283FKG.bam hg19 released low read depth, low read length experiment not submitted to GEO missing control alignments ENCFF338GMK bam alignments ENCSR764OXF ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM39-human ENCAB975CWB DNA SDS formaldehyde False 2018-01-22 ENCODE 2 40 ENCFF518CED, ENCFF807MUK 684872555 ENCODE Processing Pipeline a2d263ddf4d290c719cfae6c0528d54e https://www.encodeproject.org/files/ENCFF338GMK/@@download/ENCFF338GMK.bam hg19 released low read depth, low read length experiment not submitted to GEO missing control alignments ENCFF927SAQ bam unfiltered alignments ENCSR764OXF ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM39-human ENCAB975CWB DNA SDS formaldehyde False 2018-01-22 ENCODE 2 40 ENCFF518CED, ENCFF643CGH 1094058662 ENCODE Processing Pipeline d7d319f0fc13edde552334ffa2a1f898 https://www.encodeproject.org/files/ENCFF927SAQ/@@download/ENCFF927SAQ.bam GRCh38 released low read depth, low read length experiment not submitted to GEO missing control alignments ENCFF218QBY bam alignments ENCSR764OXF ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM39-human ENCAB975CWB DNA SDS formaldehyde False 2018-01-22 ENCODE 2 40 ENCFF518CED, ENCFF643CGH 684050751 ENCODE Processing Pipeline 86e8747d8916331e5c1eea9f10205e71 https://www.encodeproject.org/files/ENCFF218QBY/@@download/ENCFF218QBY.bam GRCh38 released low read depth, low read length experiment not submitted to GEO missing control alignments ENCFF438LZN bam unfiltered alignments ENCSR764OXF ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM39-human ENCAB975CWB DNA SDS formaldehyde False 2018-01-22 ENCODE 1 40 ENCFF807MUK, ENCFF843ZPR 1147555625 ENCODE Processing Pipeline 36de8900143cb381a3d418e94431c805 https://www.encodeproject.org/files/ENCFF438LZN/@@download/ENCFF438LZN.bam hg19 released low read depth, low read length experiment not submitted to GEO missing control alignments ENCFF189KSL bam unfiltered alignments ENCSR764OXF ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM39-human ENCAB975CWB DNA SDS formaldehyde False 2018-01-22 ENCODE 1 40 ENCFF643CGH, ENCFF843ZPR 1151681617 ENCODE Processing Pipeline 53523013088566fe8fdaa3a794d02cc7 https://www.encodeproject.org/files/ENCFF189KSL/@@download/ENCFF189KSL.bam GRCh38 released low read depth, low read length experiment not submitted to GEO missing control alignments ENCFF656RDN bam alignments ENCSR764OXF ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM39-human ENCAB975CWB DNA SDS formaldehyde False 2018-01-22 ENCODE 1 40 ENCFF807MUK, ENCFF843ZPR 731590680 ENCODE Processing Pipeline d20a0c1a54d4abb2a629e811aab855db https://www.encodeproject.org/files/ENCFF656RDN/@@download/ENCFF656RDN.bam hg19 released low read depth, low read length experiment not submitted to GEO missing control alignments ENCFF063CFN bam alignments ENCSR764OXF ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM39-human ENCAB975CWB DNA SDS formaldehyde False 2018-01-22 ENCODE 1 40 ENCFF643CGH, ENCFF843ZPR 730739430 ENCODE Processing Pipeline 21ab969450635a502f0ab09148392089 https://www.encodeproject.org/files/ENCFF063CFN/@@download/ENCFF063CFN.bam GRCh38 released low read depth, low read length experiment not submitted to GEO missing control alignments ENCFF512BEK bigWig signal p-value ENCSR764OXF ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM39-human ENCAB975CWB DNA SDS formaldehyde False 2018-01-22 ENCODE 1, 2 ENCFF338GMK, ENCFF477SGV, ENCFF656RDN, ENCFF705ZEH 979145745 ENCODE Processing Pipeline cb68eb193290c90f8fd4e323fa03cf31 https://www.encodeproject.org/files/ENCFF512BEK/@@download/ENCFF512BEK.bigWig hg19 released low read depth, low read length experiment not submitted to GEO missing control alignments ENCFF931FDJ bed narrowPeak peaks ENCSR764OXF ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM39-human ENCAB975CWB DNA SDS formaldehyde False 2018-01-22 ENCODE 2 ENCFF338GMK, ENCFF705ZEH 5325342 ENCODE Processing Pipeline c253cf61597b4f3bee4329ea3578c28a https://www.encodeproject.org/files/ENCFF931FDJ/@@download/ENCFF931FDJ.bed.gz hg19 released low read depth, low read length experiment not submitted to GEO missing control alignments ENCFF302IWU bigBed narrowPeak peaks ENCSR764OXF ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM39-human ENCAB975CWB DNA SDS formaldehyde False 2018-01-22 ENCODE 2 ENCFF931FDJ 12955433 ENCODE Processing Pipeline e1fe212a9cb3a7b7300a2691e31639c5 https://www.encodeproject.org/files/ENCFF302IWU/@@download/ENCFF302IWU.bigBed hg19 released low read depth, low read length experiment not submitted to GEO missing control alignments ENCFF693ERI bed narrowPeak conservative idr thresholded peaks ENCSR764OXF ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM39-human ENCAB975CWB DNA SDS formaldehyde False 2018-01-22 ENCODE 1, 2 ENCFF001TDO, ENCFF385SRC, ENCFF516RWD, ENCFF931FDJ 49590 ENCODE Processing Pipeline c65cb8cf769dd28a766ca280dd7f8e36 https://www.encodeproject.org/files/ENCFF693ERI/@@download/ENCFF693ERI.bed.gz hg19 released low read depth, low read length experiment not submitted to GEO missing control alignments ENCFF939MXF bigWig signal p-value ENCSR764OXF ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM39-human ENCAB975CWB DNA SDS formaldehyde False 2018-01-22 ENCODE 1 ENCFF477SGV, ENCFF656RDN 451238653 ENCODE Processing Pipeline eff77919ba8388b071f846f024f4d1f3 https://www.encodeproject.org/files/ENCFF939MXF/@@download/ENCFF939MXF.bigWig hg19 released low read depth, low read length experiment not submitted to GEO missing control alignments ENCFF824WDZ bigWig fold change over control ENCSR764OXF ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM39-human ENCAB975CWB DNA SDS formaldehyde False 2018-01-22 ENCODE 2 ENCFF338GMK, ENCFF705ZEH 389647522 ENCODE Processing Pipeline 40a28b4eb3a7fe36983151e0c3269ac5 https://www.encodeproject.org/files/ENCFF824WDZ/@@download/ENCFF824WDZ.bigWig hg19 released low read depth, low read length experiment not submitted to GEO missing control alignments ENCFF385SRC bed narrowPeak peaks ENCSR764OXF ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM39-human ENCAB975CWB DNA SDS formaldehyde False 2018-01-22 ENCODE 1 ENCFF477SGV, ENCFF656RDN 5644009 ENCODE Processing Pipeline 48301dfbdebe15de7ac1d5f611e071f6 https://www.encodeproject.org/files/ENCFF385SRC/@@download/ENCFF385SRC.bed.gz hg19 released low read depth, low read length experiment not submitted to GEO missing control alignments ENCFF516RWD bed narrowPeak peaks ENCSR764OXF ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM39-human ENCAB975CWB DNA SDS formaldehyde False 2018-01-22 ENCODE 1, 2 ENCFF338GMK, ENCFF477SGV, ENCFF656RDN, ENCFF705ZEH 6821203 ENCODE Processing Pipeline d6112ace681c04450ab3e2090c6ea99e https://www.encodeproject.org/files/ENCFF516RWD/@@download/ENCFF516RWD.bed.gz hg19 released low read depth, low read length experiment not submitted to GEO missing control alignments ENCFF481OIK bigWig fold change over control ENCSR764OXF ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM39-human ENCAB975CWB DNA SDS formaldehyde False 2018-01-22 ENCODE 1 ENCFF477SGV, ENCFF656RDN 382182356 ENCODE Processing Pipeline 34752b201c886f748b7eaca345274f66 https://www.encodeproject.org/files/ENCFF481OIK/@@download/ENCFF481OIK.bigWig hg19 released low read depth, low read length experiment not submitted to GEO missing control alignments ENCFF046WHP bigWig fold change over control ENCSR764OXF ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM39-human ENCAB975CWB DNA SDS formaldehyde False 2018-01-22 ENCODE 1, 2 ENCFF338GMK, ENCFF477SGV, ENCFF656RDN, ENCFF705ZEH 823583642 ENCODE Processing Pipeline 71e8bf2604eef74fbf8592262d59062f https://www.encodeproject.org/files/ENCFF046WHP/@@download/ENCFF046WHP.bigWig hg19 released low read depth, low read length experiment not submitted to GEO missing control alignments ENCFF205BFQ bigBed narrowPeak conservative idr thresholded peaks ENCSR764OXF ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM39-human ENCAB975CWB DNA SDS formaldehyde False 2018-01-22 ENCODE 1, 2 ENCFF693ERI 168310 ENCODE Processing Pipeline 3a7775dfecbdaa3310a83026cef2a26c https://www.encodeproject.org/files/ENCFF205BFQ/@@download/ENCFF205BFQ.bigBed hg19 released low read depth, low read length experiment not submitted to GEO missing control alignments ENCFF017KVR bigBed narrowPeak optimal idr thresholded peaks ENCSR764OXF ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM39-human ENCAB975CWB DNA SDS formaldehyde False 2018-01-22 ENCODE 1, 2 ENCFF209JJD 174546 ENCODE Processing Pipeline 6f541d4bf8da1215389e6da77dba5c61 https://www.encodeproject.org/files/ENCFF017KVR/@@download/ENCFF017KVR.bigBed hg19 released low read depth, low read length experiment not submitted to GEO missing control alignments ENCFF935JKE bigWig signal p-value ENCSR764OXF ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM39-human ENCAB975CWB DNA SDS formaldehyde False 2018-01-22 ENCODE 2 ENCFF338GMK, ENCFF705ZEH 447200866 ENCODE Processing Pipeline 62a5196cf42bf9144d31968498ab45fa https://www.encodeproject.org/files/ENCFF935JKE/@@download/ENCFF935JKE.bigWig hg19 released low read depth, low read length experiment not submitted to GEO missing control alignments ENCFF124SCH bigBed narrowPeak peaks ENCSR764OXF ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM39-human ENCAB975CWB DNA SDS formaldehyde False 2018-01-22 ENCODE 1, 2 ENCFF516RWD 13015332 ENCODE Processing Pipeline ec59941a304813ff58000a7a9edcad00 https://www.encodeproject.org/files/ENCFF124SCH/@@download/ENCFF124SCH.bigBed hg19 released low read depth, low read length experiment not submitted to GEO missing control alignments ENCFF209JJD bed narrowPeak optimal idr thresholded peaks ENCSR764OXF ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM39-human ENCAB975CWB DNA SDS formaldehyde False 2018-01-22 ENCODE 1, 2 ENCFF001TDO, ENCFF385SRC, ENCFF516RWD, ENCFF931FDJ 52334 ENCODE Processing Pipeline f2717e7e28bb23539039c99e1f4e2795 https://www.encodeproject.org/files/ENCFF209JJD/@@download/ENCFF209JJD.bed.gz hg19 released low read depth, low read length experiment not submitted to GEO missing control alignments ENCFF540MRJ bigBed narrowPeak peaks ENCSR764OXF ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM39-human ENCAB975CWB DNA SDS formaldehyde False 2018-01-22 ENCODE 1 ENCFF385SRC 12996674 ENCODE Processing Pipeline 0cca04e9c61d4bf7211c04dd97f28bfb https://www.encodeproject.org/files/ENCFF540MRJ/@@download/ENCFF540MRJ.bigBed hg19 released low read depth, low read length experiment not submitted to GEO missing control alignments ENCFF914PAM bigBed narrowPeak optimal idr thresholded peaks ENCSR764OXF ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM39-human ENCAB975CWB DNA SDS formaldehyde False 2018-01-22 ENCODE 1, 2 ENCFF503DIK 186951 ENCODE Processing Pipeline a68e7f679ed3c7406a7e8fd0697ac378 https://www.encodeproject.org/files/ENCFF914PAM/@@download/ENCFF914PAM.bigBed GRCh38 released low read depth, low read length experiment not submitted to GEO missing control alignments ENCFF806RMK bigWig signal p-value ENCSR764OXF ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM39-human ENCAB975CWB DNA SDS formaldehyde False 2018-01-22 ENCODE 1, 2 ENCFF063CFN, ENCFF218QBY 752266568 ENCODE Processing Pipeline e8aac3bc5e7145a07a444b8e84252f79 https://www.encodeproject.org/files/ENCFF806RMK/@@download/ENCFF806RMK.bigWig GRCh38 released low read depth, low read length experiment not submitted to GEO missing control alignments ENCFF923WED bed narrowPeak peaks ENCSR764OXF ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM39-human ENCAB975CWB DNA SDS formaldehyde False 2018-01-22 ENCODE 1 ENCFF063CFN 5635716 ENCODE Processing Pipeline d08a94c262817cbc7ab0ec4091a00d5e https://www.encodeproject.org/files/ENCFF923WED/@@download/ENCFF923WED.bed.gz GRCh38 released low read depth, low read length experiment not submitted to GEO missing control alignments ENCFF162WNP bigBed narrowPeak conservative idr thresholded peaks ENCSR764OXF ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM39-human ENCAB975CWB DNA SDS formaldehyde False 2018-01-22 ENCODE 1, 2 ENCFF055YKX 167511 ENCODE Processing Pipeline 07c385cbf72e05c9c0613429322ca8eb https://www.encodeproject.org/files/ENCFF162WNP/@@download/ENCFF162WNP.bigBed GRCh38 released low read depth, low read length experiment not submitted to GEO missing control alignments ENCFF370IZC bigWig signal p-value ENCSR764OXF ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM39-human ENCAB975CWB DNA SDS formaldehyde False 2018-01-22 ENCODE 1 ENCFF063CFN 538177093 ENCODE Processing Pipeline 52435be67ef2dbce92bfe23280fe26d9 https://www.encodeproject.org/files/ENCFF370IZC/@@download/ENCFF370IZC.bigWig GRCh38 released low read depth, low read length experiment not submitted to GEO missing control alignments ENCFF934FBC bigWig signal p-value ENCSR764OXF ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM39-human ENCAB975CWB DNA SDS formaldehyde False 2018-01-22 ENCODE 2 ENCFF218QBY 530167903 ENCODE Processing Pipeline 6c4f1526107ffc960e9921df93af1ba6 https://www.encodeproject.org/files/ENCFF934FBC/@@download/ENCFF934FBC.bigWig GRCh38 released low read depth, low read length experiment not submitted to GEO missing control alignments ENCFF102ZEV bigWig fold change over control ENCSR764OXF ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM39-human ENCAB975CWB DNA SDS formaldehyde False 2018-01-22 ENCODE 1, 2 ENCFF063CFN, ENCFF218QBY 826769537 ENCODE Processing Pipeline b50e16897f723a7ee7471df9b6f7748a https://www.encodeproject.org/files/ENCFF102ZEV/@@download/ENCFF102ZEV.bigWig GRCh38 released low read depth, low read length experiment not submitted to GEO missing control alignments ENCFF638AEI bed narrowPeak peaks ENCSR764OXF ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM39-human ENCAB975CWB DNA SDS formaldehyde False 2018-01-22 ENCODE 2 ENCFF218QBY 5305283 ENCODE Processing Pipeline be15f83c7bc906b1933b29a3d39ea0b9 https://www.encodeproject.org/files/ENCFF638AEI/@@download/ENCFF638AEI.bed.gz GRCh38 released low read depth, low read length experiment not submitted to GEO missing control alignments ENCFF879ZIG bigBed narrowPeak peaks ENCSR764OXF ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM39-human ENCAB975CWB DNA SDS formaldehyde False 2018-01-22 ENCODE 2 ENCFF638AEI 12970811 ENCODE Processing Pipeline 56d5e0e2385553249031af0817e77988 https://www.encodeproject.org/files/ENCFF879ZIG/@@download/ENCFF879ZIG.bigBed GRCh38 released low read depth, low read length experiment not submitted to GEO missing control alignments ENCFF828PSO bigBed narrowPeak peaks ENCSR764OXF ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM39-human ENCAB975CWB DNA SDS formaldehyde False 2018-01-22 ENCODE 1, 2 ENCFF471VAC 13030574 ENCODE Processing Pipeline 284292c81e78be6f237b85936232b0d3 https://www.encodeproject.org/files/ENCFF828PSO/@@download/ENCFF828PSO.bigBed GRCh38 released low read depth, low read length experiment not submitted to GEO missing control alignments ENCFF503DIK bed narrowPeak optimal idr thresholded peaks ENCSR764OXF ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM39-human ENCAB975CWB DNA SDS formaldehyde False 2018-01-22 ENCODE 1, 2 ENCFF419RSJ, ENCFF471VAC, ENCFF638AEI, ENCFF923WED 58149 ENCODE Processing Pipeline b2a60c137734255b7be0d029f2330a7d https://www.encodeproject.org/files/ENCFF503DIK/@@download/ENCFF503DIK.bed.gz GRCh38 released low read depth, low read length experiment not submitted to GEO missing control alignments ENCFF494YKZ bigWig fold change over control ENCSR764OXF ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM39-human ENCAB975CWB DNA SDS formaldehyde False 2018-01-22 ENCODE 1 ENCFF063CFN 397266377 ENCODE Processing Pipeline 12758ef9532963a2b204ccaed55558a8 https://www.encodeproject.org/files/ENCFF494YKZ/@@download/ENCFF494YKZ.bigWig GRCh38 released low read depth, low read length experiment not submitted to GEO missing control alignments ENCFF055YKX bed narrowPeak conservative idr thresholded peaks ENCSR764OXF ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM39-human ENCAB975CWB DNA SDS formaldehyde False 2018-01-22 ENCODE 1, 2 ENCFF419RSJ, ENCFF471VAC, ENCFF638AEI, ENCFF923WED 47992 ENCODE Processing Pipeline e5c4d13e4b0609dcb707f63ee76c6c53 https://www.encodeproject.org/files/ENCFF055YKX/@@download/ENCFF055YKX.bed.gz GRCh38 released low read depth, low read length experiment not submitted to GEO missing control alignments ENCFF450QYX bigWig fold change over control ENCSR764OXF ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM39-human ENCAB975CWB DNA SDS formaldehyde False 2018-01-22 ENCODE 2 ENCFF218QBY 378411811 ENCODE Processing Pipeline 30bb057ce51ff924c7c41d36aaad421c https://www.encodeproject.org/files/ENCFF450QYX/@@download/ENCFF450QYX.bigWig GRCh38 released low read depth, low read length experiment not submitted to GEO missing control alignments ENCFF471VAC bed narrowPeak peaks ENCSR764OXF ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM39-human ENCAB975CWB DNA SDS formaldehyde False 2018-01-22 ENCODE 1, 2 ENCFF063CFN, ENCFF218QBY 6829700 ENCODE Processing Pipeline 6cdbfa814736ce2b1a57602102519b70 https://www.encodeproject.org/files/ENCFF471VAC/@@download/ENCFF471VAC.bed.gz GRCh38 released low read depth, low read length experiment not submitted to GEO missing control alignments ENCFF907REL bigBed narrowPeak peaks ENCSR764OXF ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM39-human ENCAB975CWB DNA SDS formaldehyde False 2018-01-22 ENCODE 1 ENCFF923WED 12999768 ENCODE Processing Pipeline 8a568be72c9136c9e06c8d4e5be12cc3 https://www.encodeproject.org/files/ENCFF907REL/@@download/ENCFF907REL.bigBed GRCh38 released low read depth, low read length experiment not submitted to GEO missing control alignments ENCFF329MZG bam unfiltered alignments ENCSR018MSO ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF148-human ENCAB728YTO DNA False 2017-12-01 ENCODE 4 50 ENCFF029VDC, ENCFF689PMN, ENCFF807MUK 1456086033 ENCODE Processing Pipeline 17bb85a51664eb7422a7bfafe04c8326 https://www.encodeproject.org/files/ENCFF329MZG/@@download/ENCFF329MZG.bam hg19 released missing genetic modification characterization experiment not submitted to GEO ENCFF557RIA bam unfiltered alignments ENCSR018MSO ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF148-human ENCAB728YTO DNA False 2017-12-01 ENCODE 3 50 ENCFF552KRG, ENCFF639TAD, ENCFF807MUK 1785060949 ENCODE Processing Pipeline 9208f549347e259906401d9c45192d59 https://www.encodeproject.org/files/ENCFF557RIA/@@download/ENCFF557RIA.bam hg19 released missing genetic modification characterization experiment not submitted to GEO ENCFF809JGK fastq reads ENCSR018MSO ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF148-human ENCAB728YTO DNA False 2017-12-01 ENCODE 2 1 50 single-ended 930049569 Kevin White, UChicago a9dcf89e5334d57a57eb50bce67a2ba6 https://www.encodeproject.org/files/ENCFF809JGK/@@download/ENCFF809JGK.fastq.gz Illumina HiSeq 2000 /files/ENCFF330MJC/ archived missing genetic modification characterization experiment not submitted to GEO ENCFF552KRG fastq reads ENCSR018MSO ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF148-human ENCAB728YTO DNA False 2017-12-01 ENCODE 3 1 50 single-ended 743517134 Kevin White, UChicago e4a2cf6aa7a9951862ddf75272bd81c6 https://www.encodeproject.org/files/ENCFF552KRG/@@download/ENCFF552KRG.fastq.gz Illumina HiSeq 2000 /files/ENCFF330MJC/ released missing genetic modification characterization experiment not submitted to GEO ENCFF029VDC fastq reads ENCSR018MSO ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF148-human ENCAB728YTO DNA False 2017-12-01 ENCODE 4 1 50 single-ended 585967937 Kevin White, UChicago 98687ac5698c3539a1cdae038dc8beaf https://www.encodeproject.org/files/ENCFF029VDC/@@download/ENCFF029VDC.fastq.gz Illumina HiSeq 2500 /files/ENCFF330MJC/ released missing genetic modification characterization experiment not submitted to GEO ENCFF522YVV fastq reads ENCSR018MSO ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF148-human ENCAB728YTO DNA False 2017-12-01 ENCODE 1 1 50 single-ended 816878862 Kevin White, UChicago 8e05a650cfa0a03024cbb4732c212c66 https://www.encodeproject.org/files/ENCFF522YVV/@@download/ENCFF522YVV.fastq.gz Illumina HiSeq 2000 /files/ENCFF330MJC/ archived missing genetic modification characterization experiment not submitted to GEO ENCFF285EHK fastq reads ENCSR018MSO ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF148-human ENCAB728YTO DNA False 2017-12-01 ENCODE 2 1 50 single-ended 696999658 Kevin White, UChicago 8cf26e497caf305a6d268492a95cf110 https://www.encodeproject.org/files/ENCFF285EHK/@@download/ENCFF285EHK.fastq.gz Illumina HiSeq 2500 /files/ENCFF330MJC/ archived missing genetic modification characterization experiment not submitted to GEO ENCFF639TAD fastq reads ENCSR018MSO ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF148-human ENCAB728YTO DNA False 2017-12-01 ENCODE 3 1 50 single-ended 951948256 Kevin White, UChicago 24ea04dcff721821554424385707cc13 https://www.encodeproject.org/files/ENCFF639TAD/@@download/ENCFF639TAD.fastq.gz Illumina HiSeq 2500 /files/ENCFF330MJC/ released missing genetic modification characterization experiment not submitted to GEO ENCFF689PMN fastq reads ENCSR018MSO ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF148-human ENCAB728YTO DNA False 2017-12-01 ENCODE 4 1 50 single-ended 799922056 Kevin White, UChicago ef63af2dc5370ebcabd418b39d0ce5e6 https://www.encodeproject.org/files/ENCFF689PMN/@@download/ENCFF689PMN.fastq.gz Illumina HiSeq 2500 /files/ENCFF330MJC/ released missing genetic modification characterization experiment not submitted to GEO ENCFF311FWI fastq reads ENCSR018MSO ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF148-human ENCAB728YTO DNA False 2017-12-01 ENCODE 1 1 50 single-ended 723646495 Kevin White, UChicago a0a819af8e4d9018f770bb6a2921ecb4 https://www.encodeproject.org/files/ENCFF311FWI/@@download/ENCFF311FWI.fastq.gz Illumina HiSeq 2500 /files/ENCFF330MJC/ archived missing genetic modification characterization experiment not submitted to GEO ENCFF652MLY bam alignments ENCSR018MSO ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF148-human ENCAB728YTO DNA False 2017-12-01 ENCODE 4 ENCFF029VDC, ENCFF689PMN, ENCFF807MUK 1005922581 ENCODE Processing Pipeline d54f5f140db5c72d44d7c8bcece00b55 https://www.encodeproject.org/files/ENCFF652MLY/@@download/ENCFF652MLY.bam hg19 released missing genetic modification characterization experiment not submitted to GEO ENCFF628WUH bam alignments ENCSR018MSO ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF148-human ENCAB728YTO DNA False 2017-12-01 ENCODE 3 ENCFF552KRG, ENCFF639TAD, ENCFF807MUK 1331345266 ENCODE Processing Pipeline 2ce2a39c438aa3c4f12379023bddfa8d https://www.encodeproject.org/files/ENCFF628WUH/@@download/ENCFF628WUH.bam hg19 released missing genetic modification characterization experiment not submitted to GEO ENCFF540RRN bam alignments ENCSR018MSO ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF148-human ENCAB728YTO DNA False 2017-12-01 ENCODE 1 ENCFF311FWI, ENCFF522YVV, ENCFF807MUK 1282605397 ENCODE Processing Pipeline 38e49e5265305b00b03c3f0bfcd7f70f https://www.encodeproject.org/files/ENCFF540RRN/@@download/ENCFF540RRN.bam hg19 archived missing genetic modification characterization experiment not submitted to GEO ENCFF332SCO bam alignments ENCSR018MSO ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF148-human ENCAB728YTO DNA False 2017-12-01 ENCODE 2 ENCFF285EHK, ENCFF807MUK, ENCFF809JGK 1226888019 ENCODE Processing Pipeline 260251e5a5f314d2c6df15a419868b9a https://www.encodeproject.org/files/ENCFF332SCO/@@download/ENCFF332SCO.bam hg19 archived missing genetic modification characterization experiment not submitted to GEO ENCFF175LHQ bam unfiltered alignments ENCSR018MSO ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF148-human ENCAB728YTO DNA False 2017-12-01 ENCODE 4 50 ENCFF029VDC, ENCFF643CGH, ENCFF689PMN 1460546566 ENCODE Processing Pipeline 089889ce118145561a5e8d0f1e4a0d2b https://www.encodeproject.org/files/ENCFF175LHQ/@@download/ENCFF175LHQ.bam GRCh38 released missing genetic modification characterization experiment not submitted to GEO ENCFF210JIP bam alignments ENCSR018MSO ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF148-human ENCAB728YTO DNA False 2017-12-01 ENCODE 4 50 ENCFF029VDC, ENCFF643CGH, ENCFF689PMN 1005428864 ENCODE Processing Pipeline b163c29b49113016b20d22cf4ec113c9 https://www.encodeproject.org/files/ENCFF210JIP/@@download/ENCFF210JIP.bam GRCh38 released missing genetic modification characterization experiment not submitted to GEO ENCFF634BDN bam alignments ENCSR018MSO ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF148-human ENCAB728YTO DNA False 2017-12-01 ENCODE 3 50 ENCFF552KRG, ENCFF639TAD, ENCFF643CGH 1330737938 ENCODE Processing Pipeline 2bfb26aa5ee5a341f414f42dd8e364c1 https://www.encodeproject.org/files/ENCFF634BDN/@@download/ENCFF634BDN.bam GRCh38 released missing genetic modification characterization experiment not submitted to GEO ENCFF482YXV bam unfiltered alignments ENCSR018MSO ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF148-human ENCAB728YTO DNA False 2017-12-01 ENCODE 3 50 ENCFF552KRG, ENCFF639TAD, ENCFF643CGH 1791168348 ENCODE Processing Pipeline 8d854a0578da0be0c6483c2288f468fe https://www.encodeproject.org/files/ENCFF482YXV/@@download/ENCFF482YXV.bam GRCh38 released missing genetic modification characterization experiment not submitted to GEO ENCFF116DIO bed narrowPeak optimal idr thresholded peaks ENCSR018MSO ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF148-human ENCAB728YTO DNA False 2017-12-01 ENCODE 3, 4 ENCFF001TDO, ENCFF297GYL, ENCFF890QZH, ENCFF985CUX 412739 ENCODE Processing Pipeline 1373edacc8e8c659850e64d69646692f https://www.encodeproject.org/files/ENCFF116DIO/@@download/ENCFF116DIO.bed.gz hg19 released missing genetic modification characterization experiment not submitted to GEO ENCFF463OBI bigWig signal p-value ENCSR018MSO ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF148-human ENCAB728YTO DNA False 2017-12-01 ENCODE 3 ENCFF628WUH, ENCFF873OEB 767809970 ENCODE Processing Pipeline ff037e0d16421f4838a0fa57f66ea8cd https://www.encodeproject.org/files/ENCFF463OBI/@@download/ENCFF463OBI.bigWig hg19 released missing genetic modification characterization experiment not submitted to GEO ENCFF963UGH bigWig fold change over control ENCSR018MSO ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF148-human ENCAB728YTO DNA False 2017-12-01 ENCODE 3, 4 ENCFF628WUH, ENCFF652MLY, ENCFF873OEB 1187243077 ENCODE Processing Pipeline f49108c379ed29972e80ad8bbd14c09b https://www.encodeproject.org/files/ENCFF963UGH/@@download/ENCFF963UGH.bigWig hg19 released missing genetic modification characterization experiment not submitted to GEO ENCFF297GYL bed narrowPeak peaks ENCSR018MSO ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF148-human ENCAB728YTO DNA False 2017-12-01 ENCODE 3 ENCFF628WUH, ENCFF873OEB 6823364 ENCODE Processing Pipeline d1c196a97b70e4895daaaf058bfaea05 https://www.encodeproject.org/files/ENCFF297GYL/@@download/ENCFF297GYL.bed.gz hg19 released missing genetic modification characterization experiment not submitted to GEO ENCFF985CUX bed narrowPeak peaks ENCSR018MSO ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF148-human ENCAB728YTO DNA False 2017-12-01 ENCODE 4 ENCFF652MLY, ENCFF873OEB 6455462 ENCODE Processing Pipeline e11bc058383e8fdea61915a0066f4a1b https://www.encodeproject.org/files/ENCFF985CUX/@@download/ENCFF985CUX.bed.gz hg19 released missing genetic modification characterization experiment not submitted to GEO ENCFF668QOT bigBed narrowPeak peaks ENCSR018MSO ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF148-human ENCAB728YTO DNA False 2017-12-01 ENCODE 4 ENCFF985CUX 13162738 ENCODE Processing Pipeline 2746312caf029b646a531a71fa1b6ae0 https://www.encodeproject.org/files/ENCFF668QOT/@@download/ENCFF668QOT.bigBed hg19 released missing genetic modification characterization experiment not submitted to GEO ENCFF475ERB bigBed narrowPeak conservative idr thresholded peaks ENCSR018MSO ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF148-human ENCAB728YTO DNA False 2017-12-01 ENCODE 3, 4 ENCFF913RLZ 979981 ENCODE Processing Pipeline e112b361882ae86fc10195601af3c8da https://www.encodeproject.org/files/ENCFF475ERB/@@download/ENCFF475ERB.bigBed hg19 released missing genetic modification characterization experiment not submitted to GEO ENCFF328OAA bigWig signal p-value ENCSR018MSO ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF148-human ENCAB728YTO DNA False 2017-12-01 ENCODE 4 ENCFF652MLY, ENCFF873OEB 851754513 ENCODE Processing Pipeline 51e0c0e608adee80790657499cb6ce51 https://www.encodeproject.org/files/ENCFF328OAA/@@download/ENCFF328OAA.bigWig hg19 released missing genetic modification characterization experiment not submitted to GEO ENCFF541KBJ bigBed narrowPeak peaks ENCSR018MSO ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF148-human ENCAB728YTO DNA False 2017-12-01 ENCODE 3 ENCFF297GYL 13130519 ENCODE Processing Pipeline c9a35ce81bdf4a58d3ac205b330a08a6 https://www.encodeproject.org/files/ENCFF541KBJ/@@download/ENCFF541KBJ.bigBed hg19 released missing genetic modification characterization experiment not submitted to GEO ENCFF166EDY bigBed narrowPeak peaks ENCSR018MSO ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF148-human ENCAB728YTO DNA False 2017-12-01 ENCODE 3, 4 ENCFF890QZH 13141192 ENCODE Processing Pipeline 1d40ee287ae9563e3112afa988466e3c https://www.encodeproject.org/files/ENCFF166EDY/@@download/ENCFF166EDY.bigBed hg19 released missing genetic modification characterization experiment not submitted to GEO ENCFF699UKF bigBed narrowPeak optimal idr thresholded peaks ENCSR018MSO ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF148-human ENCAB728YTO DNA False 2017-12-01 ENCODE 3, 4 ENCFF116DIO 985200 ENCODE Processing Pipeline 7159e4a181eb1b7d4bac085dbf04522d https://www.encodeproject.org/files/ENCFF699UKF/@@download/ENCFF699UKF.bigBed hg19 released missing genetic modification characterization experiment not submitted to GEO ENCFF856RQV bigWig fold change over control ENCSR018MSO ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF148-human ENCAB728YTO DNA False 2017-12-01 ENCODE 4 ENCFF652MLY, ENCFF873OEB 770321092 ENCODE Processing Pipeline a800f8e771a4105d03e7f3f028b9817c https://www.encodeproject.org/files/ENCFF856RQV/@@download/ENCFF856RQV.bigWig hg19 released missing genetic modification characterization experiment not submitted to GEO ENCFF660CEH bigWig fold change over control ENCSR018MSO ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF148-human ENCAB728YTO DNA False 2017-12-01 ENCODE 3 ENCFF628WUH, ENCFF873OEB 893594528 ENCODE Processing Pipeline 9beeae270bf4280917f0b309a38ce2b9 https://www.encodeproject.org/files/ENCFF660CEH/@@download/ENCFF660CEH.bigWig hg19 released missing genetic modification characterization experiment not submitted to GEO ENCFF355UPP bigWig signal p-value ENCSR018MSO ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF148-human ENCAB728YTO DNA False 2017-12-01 ENCODE 3, 4 ENCFF628WUH, ENCFF652MLY, ENCFF873OEB 1159141794 ENCODE Processing Pipeline f4e568049c754ab73c014d494a4c6758 https://www.encodeproject.org/files/ENCFF355UPP/@@download/ENCFF355UPP.bigWig hg19 released missing genetic modification characterization experiment not submitted to GEO ENCFF890QZH bed narrowPeak peaks ENCSR018MSO ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF148-human ENCAB728YTO DNA False 2017-12-01 ENCODE 3, 4 ENCFF628WUH, ENCFF652MLY, ENCFF873OEB 7091141 ENCODE Processing Pipeline f53f3d530da3e83bcd20c25e7c3fd430 https://www.encodeproject.org/files/ENCFF890QZH/@@download/ENCFF890QZH.bed.gz hg19 released missing genetic modification characterization experiment not submitted to GEO ENCFF913RLZ bed narrowPeak conservative idr thresholded peaks ENCSR018MSO ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF148-human ENCAB728YTO DNA False 2017-12-01 ENCODE 3, 4 ENCFF001TDO, ENCFF297GYL, ENCFF890QZH, ENCFF985CUX 410170 ENCODE Processing Pipeline e67f22147dbf35406dedf8d9c6b422b7 https://www.encodeproject.org/files/ENCFF913RLZ/@@download/ENCFF913RLZ.bed.gz hg19 released missing genetic modification characterization experiment not submitted to GEO ENCFF822YKY bigWig fold change over control ENCSR018MSO ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF148-human ENCAB728YTO DNA False 2017-12-01 ENCODE 4 ENCFF210JIP, ENCFF711KPW 767271819 ENCODE Processing Pipeline 4e9cc924c17ee27ea7a104c7e53f114a https://www.encodeproject.org/files/ENCFF822YKY/@@download/ENCFF822YKY.bigWig GRCh38 released missing genetic modification characterization experiment not submitted to GEO ENCFF525WWQ bed narrowPeak peaks ENCSR018MSO ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF148-human ENCAB728YTO DNA False 2017-12-01 ENCODE 4 ENCFF210JIP, ENCFF711KPW 6464722 ENCODE Processing Pipeline 924024ba01d03d99c4c5cc3a389a47cf https://www.encodeproject.org/files/ENCFF525WWQ/@@download/ENCFF525WWQ.bed.gz GRCh38 released missing genetic modification characterization experiment not submitted to GEO ENCFF748KZH bigBed narrowPeak peaks ENCSR018MSO ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF148-human ENCAB728YTO DNA False 2017-12-01 ENCODE 3 ENCFF605IWT 13136958 ENCODE Processing Pipeline 1512b94c68acb4d7f41fcfb6a6ed818c https://www.encodeproject.org/files/ENCFF748KZH/@@download/ENCFF748KZH.bigBed GRCh38 released missing genetic modification characterization experiment not submitted to GEO ENCFF752WJS bigBed narrowPeak peaks ENCSR018MSO ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF148-human ENCAB728YTO DNA False 2017-12-01 ENCODE 4 ENCFF525WWQ 13181050 ENCODE Processing Pipeline 203c253c35629452612633511340ead3 https://www.encodeproject.org/files/ENCFF752WJS/@@download/ENCFF752WJS.bigBed GRCh38 released missing genetic modification characterization experiment not submitted to GEO ENCFF775HNC bigWig signal p-value ENCSR018MSO ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF148-human ENCAB728YTO DNA False 2017-12-01 ENCODE 4 ENCFF210JIP, ENCFF711KPW 845447216 ENCODE Processing Pipeline 0502c6801bddb13c81fcf749cfff38b9 https://www.encodeproject.org/files/ENCFF775HNC/@@download/ENCFF775HNC.bigWig GRCh38 released missing genetic modification characterization experiment not submitted to GEO ENCFF683MAA bigWig signal p-value ENCSR018MSO ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF148-human ENCAB728YTO DNA False 2017-12-01 ENCODE 3, 4 ENCFF210JIP, ENCFF634BDN, ENCFF711KPW 1224184738 ENCODE Processing Pipeline 81040fa523eedbfef2b614916ab73e48 https://www.encodeproject.org/files/ENCFF683MAA/@@download/ENCFF683MAA.bigWig GRCh38 released missing genetic modification characterization experiment not submitted to GEO ENCFF598YCA bigBed narrowPeak conservative idr thresholded peaks ENCSR018MSO ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF148-human ENCAB728YTO DNA False 2017-12-01 ENCODE 3, 4 ENCFF164ODT 985112 ENCODE Processing Pipeline 8dc8d5061619351016db1792868f47bb https://www.encodeproject.org/files/ENCFF598YCA/@@download/ENCFF598YCA.bigBed GRCh38 released missing genetic modification characterization experiment not submitted to GEO ENCFF836QWY bed narrowPeak optimal idr thresholded peaks ENCSR018MSO ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF148-human ENCAB728YTO DNA False 2017-12-01 ENCODE 3, 4 ENCFF419RSJ, ENCFF525WWQ, ENCFF605IWT, ENCFF847JMS 422912 ENCODE Processing Pipeline 3832f801d93f6210d80cb025714d1e4b https://www.encodeproject.org/files/ENCFF836QWY/@@download/ENCFF836QWY.bed.gz GRCh38 released missing genetic modification characterization experiment not submitted to GEO ENCFF847JMS bed narrowPeak peaks ENCSR018MSO ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF148-human ENCAB728YTO DNA False 2017-12-01 ENCODE 3, 4 ENCFF210JIP, ENCFF634BDN, ENCFF711KPW 7092579 ENCODE Processing Pipeline d4f51b5491e371cd083e32fda887657f https://www.encodeproject.org/files/ENCFF847JMS/@@download/ENCFF847JMS.bed.gz GRCh38 released missing genetic modification characterization experiment not submitted to GEO ENCFF991VTG bigBed narrowPeak optimal idr thresholded peaks ENCSR018MSO ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF148-human ENCAB728YTO DNA False 2017-12-01 ENCODE 3, 4 ENCFF836QWY 1004793 ENCODE Processing Pipeline f649ac6782f3cb86a09a4ac85f689b92 https://www.encodeproject.org/files/ENCFF991VTG/@@download/ENCFF991VTG.bigBed GRCh38 released missing genetic modification characterization experiment not submitted to GEO ENCFF018CBV bigWig signal p-value ENCSR018MSO ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF148-human ENCAB728YTO DNA False 2017-12-01 ENCODE 3 ENCFF634BDN, ENCFF711KPW 986281200 ENCODE Processing Pipeline 0ae71ed6d243b37ee5bbb6cfcdc0371b https://www.encodeproject.org/files/ENCFF018CBV/@@download/ENCFF018CBV.bigWig GRCh38 released missing genetic modification characterization experiment not submitted to GEO ENCFF678RNB bigWig fold change over control ENCSR018MSO ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF148-human ENCAB728YTO DNA False 2017-12-01 ENCODE 3 ENCFF634BDN, ENCFF711KPW 895068278 ENCODE Processing Pipeline 3a38d3fa7e64f99a74fbf6443484d993 https://www.encodeproject.org/files/ENCFF678RNB/@@download/ENCFF678RNB.bigWig GRCh38 released missing genetic modification characterization experiment not submitted to GEO ENCFF970ISQ bigWig fold change over control ENCSR018MSO ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF148-human ENCAB728YTO DNA False 2017-12-01 ENCODE 3, 4 ENCFF210JIP, ENCFF634BDN, ENCFF711KPW 1191427271 ENCODE Processing Pipeline fe5d66b5f0c19afc36cf389c0fd33c60 https://www.encodeproject.org/files/ENCFF970ISQ/@@download/ENCFF970ISQ.bigWig GRCh38 released missing genetic modification characterization experiment not submitted to GEO ENCFF605IWT bed narrowPeak peaks ENCSR018MSO ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF148-human ENCAB728YTO DNA False 2017-12-01 ENCODE 3 ENCFF634BDN, ENCFF711KPW 6825513 ENCODE Processing Pipeline 9d8dac40103676a270e566568f456c58 https://www.encodeproject.org/files/ENCFF605IWT/@@download/ENCFF605IWT.bed.gz GRCh38 released missing genetic modification characterization experiment not submitted to GEO ENCFF289ZBV bigBed narrowPeak peaks ENCSR018MSO ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF148-human ENCAB728YTO DNA False 2017-12-01 ENCODE 3, 4 ENCFF847JMS 13147892 ENCODE Processing Pipeline daed74e47842305fc0c3dd296021687c https://www.encodeproject.org/files/ENCFF289ZBV/@@download/ENCFF289ZBV.bigBed GRCh38 released missing genetic modification characterization experiment not submitted to GEO ENCFF164ODT bed narrowPeak conservative idr thresholded peaks ENCSR018MSO ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF148-human ENCAB728YTO DNA False 2017-12-01 ENCODE 3, 4 ENCFF419RSJ, ENCFF525WWQ, ENCFF605IWT, ENCFF847JMS 412487 ENCODE Processing Pipeline c7a2c82cfa9f80c7c4619ae61408b198 https://www.encodeproject.org/files/ENCFF164ODT/@@download/ENCFF164ODT.bed.gz GRCh38 released missing genetic modification characterization experiment not submitted to GEO ENCFF246TXB bam unfiltered alignments ENCSR343ELW ChIP-seq EFO:0002067 K562 cell line Homo sapiens LEF1-human ENCAB961BDT DNA False 2016-07-05 ENCODE 4 100 ENCFF103BRX, ENCFF643QTB, ENCFF807MUK 6119145751 ENCODE Processing Pipeline ed5f6d0093a419a73df350c3f69264b1 https://www.encodeproject.org/files/ENCFF246TXB/@@download/ENCFF246TXB.bam hg19 released mild to moderate bottlenecking missing control alignments ENCFF453DPF bam unfiltered alignments ENCSR343ELW ChIP-seq EFO:0002067 K562 cell line Homo sapiens LEF1-human ENCAB961BDT DNA False 2016-07-05 ENCODE 3 100 ENCFF211HML, ENCFF238ZLM, ENCFF807MUK 6743955598 ENCODE Processing Pipeline 0800928aba3eafb1064688c7dd0b2027 https://www.encodeproject.org/files/ENCFF453DPF/@@download/ENCFF453DPF.bam hg19 released mild to moderate bottlenecking missing control alignments ENCFF643QTB fastq reads ENCSR343ELW ChIP-seq EFO:0002067 K562 cell line Homo sapiens LEF1-human ENCAB961BDT DNA False 2016-07-05 ENCODE 4 1 100 paired-ended 1 ENCFF103BRX 2881727182 Michael Snyder, Stanford 423e3b1305b634e216fc8d99654e85af SRA:SRR5111450 https://www.encodeproject.org/files/ENCFF643QTB/@@download/ENCFF643QTB.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFD/ released mild to moderate bottlenecking missing control alignments ENCFF103BRX fastq reads ENCSR343ELW ChIP-seq EFO:0002067 K562 cell line Homo sapiens LEF1-human ENCAB961BDT DNA False 2016-07-05 ENCODE 4 1 100 paired-ended 2 ENCFF643QTB 2916448783 Michael Snyder, Stanford 2b0105499c62470e5d9f952d3f85c63a SRA:SRR5111450 https://www.encodeproject.org/files/ENCFF103BRX/@@download/ENCFF103BRX.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFA/ released mild to moderate bottlenecking missing control alignments ENCFF238ZLM fastq reads ENCSR343ELW ChIP-seq EFO:0002067 K562 cell line Homo sapiens LEF1-human ENCAB961BDT DNA False 2016-07-05 ENCODE 3 1 100 paired-ended 2 ENCFF211HML 3260929120 Michael Snyder, Stanford 87e801a4f46eaf9b8e46c65118aed5cc SRA:SRR5111451 https://www.encodeproject.org/files/ENCFF238ZLM/@@download/ENCFF238ZLM.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFH/ released mild to moderate bottlenecking missing control alignments ENCFF211HML fastq reads ENCSR343ELW ChIP-seq EFO:0002067 K562 cell line Homo sapiens LEF1-human ENCAB961BDT DNA False 2016-07-05 ENCODE 3 1 100 paired-ended 1 ENCFF238ZLM 3255722435 Michael Snyder, Stanford c5a5779e83814b1564baa4aebdb63e1e SRA:SRR5111451 https://www.encodeproject.org/files/ENCFF211HML/@@download/ENCFF211HML.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFF/ released mild to moderate bottlenecking missing control alignments ENCFF928QMZ bam alignments ENCSR343ELW ChIP-seq EFO:0002067 K562 cell line Homo sapiens LEF1-human ENCAB961BDT DNA False 2016-07-05 ENCODE 4 100 ENCFF103BRX, ENCFF643QTB, ENCFF807MUK 4918527323 ENCODE Processing Pipeline 6b8e971b6ef311f9090ccb4570bbbe24 https://www.encodeproject.org/files/ENCFF928QMZ/@@download/ENCFF928QMZ.bam hg19 released mild to moderate bottlenecking missing control alignments ENCFF550WAC bam alignments ENCSR343ELW ChIP-seq EFO:0002067 K562 cell line Homo sapiens LEF1-human ENCAB961BDT DNA False 2016-07-05 ENCODE 3 100 ENCFF211HML, ENCFF238ZLM, ENCFF807MUK 5183070486 ENCODE Processing Pipeline 6d82c59db6318be7e0944ec7adcce6d1 https://www.encodeproject.org/files/ENCFF550WAC/@@download/ENCFF550WAC.bam hg19 released mild to moderate bottlenecking missing control alignments ENCFF088AMO bigWig fold change over control ENCSR343ELW ChIP-seq EFO:0002067 K562 cell line Homo sapiens LEF1-human ENCAB961BDT DNA False 2016-07-05 ENCODE 3 ENCFF550WAC, ENCFF581ZJL 1312838113 ENCODE Processing Pipeline ee8066893bba5950de8d7ec110f49978 https://www.encodeproject.org/files/ENCFF088AMO/@@download/ENCFF088AMO.bigWig hg19 released mild to moderate bottlenecking missing control alignments ENCFF715TQB bigWig fold change over control ENCSR343ELW ChIP-seq EFO:0002067 K562 cell line Homo sapiens LEF1-human ENCAB961BDT DNA False 2016-07-05 ENCODE 4 ENCFF051LWI, ENCFF928QMZ 1249869019 ENCODE Processing Pipeline 697df00b072f2984067a47648c8dd73a https://www.encodeproject.org/files/ENCFF715TQB/@@download/ENCFF715TQB.bigWig hg19 released mild to moderate bottlenecking missing control alignments ENCFF506NOD bed narrowPeak peaks ENCSR343ELW ChIP-seq EFO:0002067 K562 cell line Homo sapiens LEF1-human ENCAB961BDT DNA False 2016-07-05 ENCODE 3, 4 ENCFF051LWI, ENCFF550WAC, ENCFF581ZJL, ENCFF928QMZ 7275360 ENCODE Processing Pipeline c178623e46132c76c087e31697e4ed93 https://www.encodeproject.org/files/ENCFF506NOD/@@download/ENCFF506NOD.bed.gz hg19 released mild to moderate bottlenecking missing control alignments ENCFF358NWG bigBed narrowPeak peaks ENCSR343ELW ChIP-seq EFO:0002067 K562 cell line Homo sapiens LEF1-human ENCAB961BDT DNA False 2016-07-05 ENCODE 3 ENCFF857NTV 13246618 ENCODE Processing Pipeline 0788cb6f8f112dbd89fc97ad1c25fdb2 https://www.encodeproject.org/files/ENCFF358NWG/@@download/ENCFF358NWG.bigBed hg19 released mild to moderate bottlenecking missing control alignments ENCFF951FXR bigWig signal p-value ENCSR343ELW ChIP-seq EFO:0002067 K562 cell line Homo sapiens LEF1-human ENCAB961BDT DNA False 2016-07-05 ENCODE 4 ENCFF051LWI, ENCFF928QMZ 1093921459 ENCODE Processing Pipeline ef95295771da1b21df03c5eaff98dec7 https://www.encodeproject.org/files/ENCFF951FXR/@@download/ENCFF951FXR.bigWig hg19 released mild to moderate bottlenecking missing control alignments ENCFF945VLV bigWig signal p-value ENCSR343ELW ChIP-seq EFO:0002067 K562 cell line Homo sapiens LEF1-human ENCAB961BDT DNA False 2016-07-05 ENCODE 3, 4 ENCFF051LWI, ENCFF550WAC, ENCFF581ZJL, ENCFF928QMZ 1818063359 ENCODE Processing Pipeline a7c2ebf282f3e3b4a68b72d89ccb8bc9 https://www.encodeproject.org/files/ENCFF945VLV/@@download/ENCFF945VLV.bigWig hg19 released mild to moderate bottlenecking missing control alignments ENCFF022TEE bigBed narrowPeak peaks ENCSR343ELW ChIP-seq EFO:0002067 K562 cell line Homo sapiens LEF1-human ENCAB961BDT DNA False 2016-07-05 ENCODE 4 ENCFF421AHE 13216790 ENCODE Processing Pipeline 93d99cebb9b89647c5a02c4f51db9313 https://www.encodeproject.org/files/ENCFF022TEE/@@download/ENCFF022TEE.bigBed hg19 released mild to moderate bottlenecking missing control alignments ENCFF857NTV bed narrowPeak peaks ENCSR343ELW ChIP-seq EFO:0002067 K562 cell line Homo sapiens LEF1-human ENCAB961BDT DNA False 2016-07-05 ENCODE 3 ENCFF550WAC, ENCFF581ZJL 6990705 ENCODE Processing Pipeline 617eaae881c4775bf7fd5dc6206f45ee https://www.encodeproject.org/files/ENCFF857NTV/@@download/ENCFF857NTV.bed.gz hg19 released mild to moderate bottlenecking missing control alignments ENCFF451XLA bigBed narrowPeak peaks ENCSR343ELW ChIP-seq EFO:0002067 K562 cell line Homo sapiens LEF1-human ENCAB961BDT DNA False 2016-07-05 ENCODE 3, 4 ENCFF506NOD 13065332 ENCODE Processing Pipeline 5895f0b0a0f6dfd3752c993d25129e6b https://www.encodeproject.org/files/ENCFF451XLA/@@download/ENCFF451XLA.bigBed hg19 released mild to moderate bottlenecking missing control alignments ENCFF421AHE bed narrowPeak peaks ENCSR343ELW ChIP-seq EFO:0002067 K562 cell line Homo sapiens LEF1-human ENCAB961BDT DNA False 2016-07-05 ENCODE 4 ENCFF051LWI, ENCFF928QMZ 6940783 ENCODE Processing Pipeline d9a685d1a9a7318f8cf381bc3d015eae https://www.encodeproject.org/files/ENCFF421AHE/@@download/ENCFF421AHE.bed.gz hg19 released mild to moderate bottlenecking missing control alignments ENCFF679QYF bigWig signal p-value ENCSR343ELW ChIP-seq EFO:0002067 K562 cell line Homo sapiens LEF1-human ENCAB961BDT DNA False 2016-07-05 ENCODE 3 ENCFF550WAC, ENCFF581ZJL 1097359367 ENCODE Processing Pipeline d6b522ca1dc74d8cbabc9b557e7643d4 https://www.encodeproject.org/files/ENCFF679QYF/@@download/ENCFF679QYF.bigWig hg19 released mild to moderate bottlenecking missing control alignments ENCFF766KPI bigWig fold change over control ENCSR343ELW ChIP-seq EFO:0002067 K562 cell line Homo sapiens LEF1-human ENCAB961BDT DNA False 2016-07-05 ENCODE 3, 4 ENCFF051LWI, ENCFF550WAC, ENCFF581ZJL, ENCFF928QMZ 2232446246 ENCODE Processing Pipeline 55f4bd385d16ff4095f45a9317b72369 https://www.encodeproject.org/files/ENCFF766KPI/@@download/ENCFF766KPI.bigWig hg19 released mild to moderate bottlenecking missing control alignments ENCFF994AZS bam unfiltered alignments ENCSR343ELW ChIP-seq EFO:0002067 K562 cell line Homo sapiens LEF1-human ENCAB961BDT DNA False 2016-07-05 ENCODE 4 100 ENCFF103BRX, ENCFF643CGH, ENCFF643QTB 6124062550 ENCODE Processing Pipeline cf2cae4779fb66af217142ea05b46c95 https://www.encodeproject.org/files/ENCFF994AZS/@@download/ENCFF994AZS.bam GRCh38 released mild to moderate bottlenecking missing control alignments ENCFF442IUC bam unfiltered alignments ENCSR343ELW ChIP-seq EFO:0002067 K562 cell line Homo sapiens LEF1-human ENCAB961BDT DNA False 2016-07-05 ENCODE 3 100 ENCFF211HML, ENCFF238ZLM, ENCFF643CGH 6748012737 ENCODE Processing Pipeline fc567df98f4ff3f779baad07fe50818b https://www.encodeproject.org/files/ENCFF442IUC/@@download/ENCFF442IUC.bam GRCh38 released mild to moderate bottlenecking missing control alignments ENCFF933HFV bam alignments ENCSR343ELW ChIP-seq EFO:0002067 K562 cell line Homo sapiens LEF1-human ENCAB961BDT DNA False 2016-07-05 ENCODE 4 100 ENCFF103BRX, ENCFF643CGH, ENCFF643QTB 4920981163 ENCODE Processing Pipeline b413a0890b957e0dfa863ddc017a6a7a https://www.encodeproject.org/files/ENCFF933HFV/@@download/ENCFF933HFV.bam GRCh38 released mild to moderate bottlenecking missing control alignments ENCFF178YFO bam alignments ENCSR343ELW ChIP-seq EFO:0002067 K562 cell line Homo sapiens LEF1-human ENCAB961BDT DNA False 2016-07-05 ENCODE 3 100 ENCFF211HML, ENCFF238ZLM, ENCFF643CGH 5185367825 ENCODE Processing Pipeline bb59f5e2e1695f38a5e0097f10d91fa5 https://www.encodeproject.org/files/ENCFF178YFO/@@download/ENCFF178YFO.bam GRCh38 released mild to moderate bottlenecking missing control alignments ENCFF848SNB bigWig signal p-value ENCSR343ELW ChIP-seq EFO:0002067 K562 cell line Homo sapiens LEF1-human ENCAB961BDT DNA False 2016-07-05 ENCODE 3 ENCFF178YFO 1208274983 ENCODE Processing Pipeline 7ba2317150362d375e385752249e16ae https://www.encodeproject.org/files/ENCFF848SNB/@@download/ENCFF848SNB.bigWig GRCh38 released mild to moderate bottlenecking missing control alignments ENCFF007GQT bigWig signal p-value ENCSR343ELW ChIP-seq EFO:0002067 K562 cell line Homo sapiens LEF1-human ENCAB961BDT DNA False 2016-07-05 ENCODE 4 ENCFF933HFV 1270866133 ENCODE Processing Pipeline f1ab5ab9f44131ae9cf78f8be954e1ea https://www.encodeproject.org/files/ENCFF007GQT/@@download/ENCFF007GQT.bigWig GRCh38 released mild to moderate bottlenecking missing control alignments ENCFF725BUU bigWig signal p-value ENCSR343ELW ChIP-seq EFO:0002067 K562 cell line Homo sapiens LEF1-human ENCAB961BDT DNA False 2016-07-05 ENCODE 3, 4 ENCFF178YFO, ENCFF933HFV 1922787101 ENCODE Processing Pipeline 282c58f8dd58b9a3fef58416f265090e https://www.encodeproject.org/files/ENCFF725BUU/@@download/ENCFF725BUU.bigWig GRCh38 released mild to moderate bottlenecking missing control alignments ENCFF490ANA bigWig fold change over control ENCSR343ELW ChIP-seq EFO:0002067 K562 cell line Homo sapiens LEF1-human ENCAB961BDT DNA False 2016-07-05 ENCODE 3 ENCFF178YFO 1312677006 ENCODE Processing Pipeline 1f66aa6f70c82ebcc8f2c1e5cf0c2640 https://www.encodeproject.org/files/ENCFF490ANA/@@download/ENCFF490ANA.bigWig GRCh38 released mild to moderate bottlenecking missing control alignments ENCFF803LQE bigWig fold change over control ENCSR343ELW ChIP-seq EFO:0002067 K562 cell line Homo sapiens LEF1-human ENCAB961BDT DNA False 2016-07-05 ENCODE 4 ENCFF933HFV 1244147210 ENCODE Processing Pipeline deeee0f45de05f036f1e0d2abf5c3746 https://www.encodeproject.org/files/ENCFF803LQE/@@download/ENCFF803LQE.bigWig GRCh38 released mild to moderate bottlenecking missing control alignments ENCFF750BPV bigWig fold change over control ENCSR343ELW ChIP-seq EFO:0002067 K562 cell line Homo sapiens LEF1-human ENCAB961BDT DNA False 2016-07-05 ENCODE 3, 4 ENCFF178YFO, ENCFF933HFV 2248690793 ENCODE Processing Pipeline e35a7e1d8514cc3bacbb454a2edcf40b https://www.encodeproject.org/files/ENCFF750BPV/@@download/ENCFF750BPV.bigWig GRCh38 released mild to moderate bottlenecking missing control alignments ENCFF603XZK bed narrowPeak peaks ENCSR343ELW ChIP-seq EFO:0002067 K562 cell line Homo sapiens LEF1-human ENCAB961BDT DNA False 2016-07-05 ENCODE 3 ENCFF178YFO 6927877 ENCODE Processing Pipeline 36b8c7cd13d10baceb9a58ad7471d749 https://www.encodeproject.org/files/ENCFF603XZK/@@download/ENCFF603XZK.bed.gz GRCh38 released mild to moderate bottlenecking missing control alignments ENCFF679IOJ bed narrowPeak peaks ENCSR343ELW ChIP-seq EFO:0002067 K562 cell line Homo sapiens LEF1-human ENCAB961BDT DNA False 2016-07-05 ENCODE 4 ENCFF933HFV 6848573 ENCODE Processing Pipeline 42c05d61a0799d25bb3ad75159e9d20d https://www.encodeproject.org/files/ENCFF679IOJ/@@download/ENCFF679IOJ.bed.gz GRCh38 released mild to moderate bottlenecking missing control alignments ENCFF301GRS bed narrowPeak peaks ENCSR343ELW ChIP-seq EFO:0002067 K562 cell line Homo sapiens LEF1-human ENCAB961BDT DNA False 2016-07-05 ENCODE 3, 4 ENCFF178YFO, ENCFF933HFV 7284109 ENCODE Processing Pipeline a84ff89403f47143d927750e9c403320 https://www.encodeproject.org/files/ENCFF301GRS/@@download/ENCFF301GRS.bed.gz GRCh38 released mild to moderate bottlenecking missing control alignments ENCFF230TBE bigBed narrowPeak peaks ENCSR343ELW ChIP-seq EFO:0002067 K562 cell line Homo sapiens LEF1-human ENCAB961BDT DNA False 2016-07-05 ENCODE 3 ENCFF603XZK 13262290 ENCODE Processing Pipeline 245a836475a3dc57b4547740f6ad086d https://www.encodeproject.org/files/ENCFF230TBE/@@download/ENCFF230TBE.bigBed GRCh38 released mild to moderate bottlenecking missing control alignments ENCFF950BIO bigBed narrowPeak peaks ENCSR343ELW ChIP-seq EFO:0002067 K562 cell line Homo sapiens LEF1-human ENCAB961BDT DNA False 2016-07-05 ENCODE 4 ENCFF679IOJ 13221372 ENCODE Processing Pipeline a5faed96a5b1f8a79b149805c0e98faf https://www.encodeproject.org/files/ENCFF950BIO/@@download/ENCFF950BIO.bigBed GRCh38 released mild to moderate bottlenecking missing control alignments ENCFF732KZD bigBed narrowPeak peaks ENCSR343ELW ChIP-seq EFO:0002067 K562 cell line Homo sapiens LEF1-human ENCAB961BDT DNA False 2016-07-05 ENCODE 3, 4 ENCFF301GRS 13084081 ENCODE Processing Pipeline 5738113a098bed8183c60fb182bf8721 https://www.encodeproject.org/files/ENCFF732KZD/@@download/ENCFF732KZD.bigBed GRCh38 released mild to moderate bottlenecking missing control alignments ENCFF299RMS bed narrowPeak conservative idr thresholded peaks ENCSR343ELW ChIP-seq EFO:0002067 K562 cell line Homo sapiens LEF1-human ENCAB961BDT DNA False 2016-07-05 ENCODE 3, 4 ENCFF301GRS, ENCFF419RSJ, ENCFF603XZK, ENCFF679IOJ 266835 ENCODE Processing Pipeline 0fe7820c4a43c2aa9d5e35c8ef76f085 https://www.encodeproject.org/files/ENCFF299RMS/@@download/ENCFF299RMS.bed.gz GRCh38 released mild to moderate bottlenecking missing control alignments ENCFF726UDS bigBed narrowPeak conservative idr thresholded peaks ENCSR343ELW ChIP-seq EFO:0002067 K562 cell line Homo sapiens LEF1-human ENCAB961BDT DNA False 2016-07-05 ENCODE 3, 4 ENCFF299RMS 595109 ENCODE Processing Pipeline 4f0e40b18cee723e59de99c951de7ec7 https://www.encodeproject.org/files/ENCFF726UDS/@@download/ENCFF726UDS.bigBed GRCh38 released mild to moderate bottlenecking missing control alignments ENCFF134HQP bed narrowPeak optimal idr thresholded peaks ENCSR343ELW ChIP-seq EFO:0002067 K562 cell line Homo sapiens LEF1-human ENCAB961BDT DNA False 2016-07-05 ENCODE 3, 4 ENCFF301GRS, ENCFF419RSJ, ENCFF603XZK, ENCFF679IOJ 406585 ENCODE Processing Pipeline d1c621345daf570dd43b3bae98baef6a https://www.encodeproject.org/files/ENCFF134HQP/@@download/ENCFF134HQP.bed.gz GRCh38 released mild to moderate bottlenecking missing control alignments ENCFF457NJM bigBed narrowPeak optimal idr thresholded peaks ENCSR343ELW ChIP-seq EFO:0002067 K562 cell line Homo sapiens LEF1-human ENCAB961BDT DNA False 2016-07-05 ENCODE 3, 4 ENCFF134HQP 816826 ENCODE Processing Pipeline bad83467a249905c072e05c44c449c4d https://www.encodeproject.org/files/ENCFF457NJM/@@download/ENCFF457NJM.bigBed GRCh38 released mild to moderate bottlenecking missing control alignments ENCFF060EYU bigBed narrowPeak optimal idr thresholded peaks ENCSR343ELW ChIP-seq EFO:0002067 K562 cell line Homo sapiens LEF1-human ENCAB961BDT DNA False 2016-07-05 ENCODE 3, 4 ENCFF659WAF 576552 ENCODE Processing Pipeline 91631e89ddaf225c4dbd6861ccb48f55 https://www.encodeproject.org/files/ENCFF060EYU/@@download/ENCFF060EYU.bigBed hg19 released mild to moderate bottlenecking missing control alignments ENCFF595DQM bed narrowPeak conservative idr thresholded peaks ENCSR343ELW ChIP-seq EFO:0002067 K562 cell line Homo sapiens LEF1-human ENCAB961BDT DNA False 2016-07-05 ENCODE 3, 4 ENCFF001TDO, ENCFF421AHE, ENCFF506NOD, ENCFF857NTV 218424 ENCODE Processing Pipeline 1083898528ab82914392c5ec47f1d0a9 https://www.encodeproject.org/files/ENCFF595DQM/@@download/ENCFF595DQM.bed.gz hg19 released mild to moderate bottlenecking missing control alignments ENCFF659WAF bed narrowPeak optimal idr thresholded peaks ENCSR343ELW ChIP-seq EFO:0002067 K562 cell line Homo sapiens LEF1-human ENCAB961BDT DNA False 2016-07-05 ENCODE 3, 4 ENCFF001TDO, ENCFF421AHE, ENCFF506NOD, ENCFF857NTV 338164 ENCODE Processing Pipeline 17a9dcb21ebd4ab5fd04becd0fe896f9 https://www.encodeproject.org/files/ENCFF659WAF/@@download/ENCFF659WAF.bed.gz hg19 released mild to moderate bottlenecking missing control alignments ENCFF753NVN bigBed narrowPeak conservative idr thresholded peaks ENCSR343ELW ChIP-seq EFO:0002067 K562 cell line Homo sapiens LEF1-human ENCAB961BDT DNA False 2016-07-05 ENCODE 3, 4 ENCFF595DQM 425406 ENCODE Processing Pipeline d806bbf3e3e21bb9818e9ff908c36806 https://www.encodeproject.org/files/ENCFF753NVN/@@download/ENCFF753NVN.bigBed hg19 released mild to moderate bottlenecking missing control alignments ENCFF619WEO bam unfiltered alignments ENCSR194IJN ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF766-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 50 ENCFF807MUK, ENCFF962FCU, ENCFF994DBJ 1493561843 ENCODE Processing Pipeline ca3082a60966f215ac95604cf9192bbb https://www.encodeproject.org/files/ENCFF619WEO/@@download/ENCFF619WEO.bam hg19 released missing genetic modification characterization ENCFF864FKK bam unfiltered alignments ENCSR194IJN ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF766-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 50 ENCFF734FMD, ENCFF807MUK, ENCFF862UUB 1453833745 ENCODE Processing Pipeline eefb7897f08d281d8c1f026143cd9e9d https://www.encodeproject.org/files/ENCFF864FKK/@@download/ENCFF864FKK.bam hg19 released missing genetic modification characterization ENCFF962FCU fastq reads ENCSR194IJN ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF766-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 1 50 single-ended 631111094 Kevin White, UChicago e366f025ef8774e4489b168ac3e5a6cb SRA:SRR6213004 https://www.encodeproject.org/files/ENCFF962FCU/@@download/ENCFF962FCU.fastq.gz Illumina HiSeq 2500 /files/ENCFF647SGY/, /files/ENCFF864QSY/ released missing genetic modification characterization ENCFF734FMD fastq reads ENCSR194IJN ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF766-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 1 50 single-ended 663018516 Kevin White, UChicago 576af8fa0733a347981ab6a1daf6669b SRA:SRR6213002 https://www.encodeproject.org/files/ENCFF734FMD/@@download/ENCFF734FMD.fastq.gz Illumina HiSeq 2500 /files/ENCFF647SGY/, /files/ENCFF864QSY/ released missing genetic modification characterization ENCFF994DBJ fastq reads ENCSR194IJN ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF766-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 1 50 single-ended 753819574 Kevin White, UChicago 7cbd990e70ba63fae55e55d0a234c2d0 SRA:SRR6213005 https://www.encodeproject.org/files/ENCFF994DBJ/@@download/ENCFF994DBJ.fastq.gz Illumina HiSeq 2000 /files/ENCFF647SGY/, /files/ENCFF864QSY/ released missing genetic modification characterization ENCFF862UUB fastq reads ENCSR194IJN ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF766-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 1 50 single-ended 676971720 Kevin White, UChicago 577baaebd645d8d19d53aab7af449c3d SRA:SRR6213003 https://www.encodeproject.org/files/ENCFF862UUB/@@download/ENCFF862UUB.fastq.gz Illumina HiSeq 2000 /files/ENCFF647SGY/, /files/ENCFF864QSY/ released missing genetic modification characterization ENCFF323PVX bam alignments ENCSR194IJN ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF766-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 50 ENCFF734FMD, ENCFF807MUK, ENCFF862UUB 1125719840 ENCODE Processing Pipeline 433d4ee6f9f589dd51d96625898e32ee https://www.encodeproject.org/files/ENCFF323PVX/@@download/ENCFF323PVX.bam hg19 released missing genetic modification characterization ENCFF133ZYE bam alignments ENCSR194IJN ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF766-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 50 ENCFF807MUK, ENCFF962FCU, ENCFF994DBJ 1141658112 ENCODE Processing Pipeline baf7a6d7c1087c457d82f036f89b3800 https://www.encodeproject.org/files/ENCFF133ZYE/@@download/ENCFF133ZYE.bam hg19 released missing genetic modification characterization ENCFF041UZB bigWig signal p-value ENCSR194IJN ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF766-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF133ZYE, ENCFF754ZXY 502655059 ENCODE Processing Pipeline f99e72bd11520c38b8ac496feef5096c https://www.encodeproject.org/files/ENCFF041UZB/@@download/ENCFF041UZB.bigWig hg19 released missing genetic modification characterization ENCFF600NSH bigWig signal p-value ENCSR194IJN ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF766-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF133ZYE, ENCFF323PVX, ENCFF754ZXY 493409335 ENCODE Processing Pipeline 19a7986c376d7fa990ab482e2767a6a2 https://www.encodeproject.org/files/ENCFF600NSH/@@download/ENCFF600NSH.bigWig hg19 released missing genetic modification characterization ENCFF548MHD bigWig signal p-value ENCSR194IJN ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF766-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF323PVX, ENCFF754ZXY 496626049 ENCODE Processing Pipeline 517f7230f5fa626b64b8d3f6e4be6baa https://www.encodeproject.org/files/ENCFF548MHD/@@download/ENCFF548MHD.bigWig hg19 released missing genetic modification characterization ENCFF889PJR bigWig fold change over control ENCSR194IJN ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF766-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF133ZYE, ENCFF754ZXY 507515837 ENCODE Processing Pipeline bd073d89f31c8429e362c0a6477a777b https://www.encodeproject.org/files/ENCFF889PJR/@@download/ENCFF889PJR.bigWig hg19 released missing genetic modification characterization ENCFF059DNT bigWig fold change over control ENCSR194IJN ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF766-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF133ZYE, ENCFF323PVX, ENCFF754ZXY 815174999 ENCODE Processing Pipeline 98700255d786d15ab76d170e33c038ae https://www.encodeproject.org/files/ENCFF059DNT/@@download/ENCFF059DNT.bigWig hg19 released missing genetic modification characterization ENCFF942FSJ bigWig fold change over control ENCSR194IJN ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF766-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF323PVX, ENCFF754ZXY 498167726 ENCODE Processing Pipeline 9bb6f1ca2add76ac9040323501fa5449 https://www.encodeproject.org/files/ENCFF942FSJ/@@download/ENCFF942FSJ.bigWig hg19 released missing genetic modification characterization ENCFF908JEV bed narrowPeak peaks ENCSR194IJN ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF766-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF133ZYE, ENCFF754ZXY 6500240 ENCODE Processing Pipeline 70b159f8f15ea265f6041673fefe95e3 https://www.encodeproject.org/files/ENCFF908JEV/@@download/ENCFF908JEV.bed.gz hg19 released missing genetic modification characterization ENCFF040CEH bed narrowPeak peaks ENCSR194IJN ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF766-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF323PVX, ENCFF754ZXY 6561709 ENCODE Processing Pipeline bce420b248bca27e98b833b8038a3721 https://www.encodeproject.org/files/ENCFF040CEH/@@download/ENCFF040CEH.bed.gz hg19 released missing genetic modification characterization ENCFF205LAU bed narrowPeak peaks ENCSR194IJN ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF766-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF133ZYE, ENCFF323PVX, ENCFF754ZXY 7051178 ENCODE Processing Pipeline 6570c5867feab057e5b6b595bcdafa55 https://www.encodeproject.org/files/ENCFF205LAU/@@download/ENCFF205LAU.bed.gz hg19 released missing genetic modification characterization ENCFF485SBF bigBed narrowPeak peaks ENCSR194IJN ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF766-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF205LAU 12883570 ENCODE Processing Pipeline 9098364e8620a26e37b49623bb31cd5b https://www.encodeproject.org/files/ENCFF485SBF/@@download/ENCFF485SBF.bigBed hg19 released missing genetic modification characterization ENCFF609GHU bigBed narrowPeak peaks ENCSR194IJN ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF766-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF040CEH 12887937 ENCODE Processing Pipeline 8c933bf1d637ac9b5e093462d790590b https://www.encodeproject.org/files/ENCFF609GHU/@@download/ENCFF609GHU.bigBed hg19 released missing genetic modification characterization ENCFF447GXO bigBed narrowPeak peaks ENCSR194IJN ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF766-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF908JEV 12984876 ENCODE Processing Pipeline e37d07ee993c5252d154888d43688636 https://www.encodeproject.org/files/ENCFF447GXO/@@download/ENCFF447GXO.bigBed hg19 released missing genetic modification characterization ENCFF865KAK bam unfiltered alignments ENCSR194IJN ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF766-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 50 ENCFF643CGH, ENCFF734FMD, ENCFF862UUB 1458677286 ENCODE Processing Pipeline 71d882d38ae51850681356426bf097b8 https://www.encodeproject.org/files/ENCFF865KAK/@@download/ENCFF865KAK.bam GRCh38 released missing genetic modification characterization ENCFF269CMX bam unfiltered alignments ENCSR194IJN ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF766-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 50 ENCFF643CGH, ENCFF962FCU, ENCFF994DBJ 1498543707 ENCODE Processing Pipeline e1842ce48616ff7a8281afcbbfca23a6 https://www.encodeproject.org/files/ENCFF269CMX/@@download/ENCFF269CMX.bam GRCh38 released missing genetic modification characterization ENCFF227TEG bam alignments ENCSR194IJN ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF766-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 50 ENCFF643CGH, ENCFF734FMD, ENCFF862UUB 1125039299 ENCODE Processing Pipeline 4d22f14f4a745b23db1e37cff39298c2 https://www.encodeproject.org/files/ENCFF227TEG/@@download/ENCFF227TEG.bam GRCh38 released missing genetic modification characterization ENCFF398UYF bam alignments ENCSR194IJN ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF766-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 50 ENCFF643CGH, ENCFF962FCU, ENCFF994DBJ 1141050630 ENCODE Processing Pipeline fb6213602f3784da70787c09666dc466 https://www.encodeproject.org/files/ENCFF398UYF/@@download/ENCFF398UYF.bam GRCh38 released missing genetic modification characterization ENCFF049LED bigWig signal p-value ENCSR194IJN ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF766-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF321YGO, ENCFF398UYF 506874893 ENCODE Processing Pipeline 48b50f9d33e1d6d4581672c2961868fc https://www.encodeproject.org/files/ENCFF049LED/@@download/ENCFF049LED.bigWig GRCh38 released missing genetic modification characterization ENCFF767WEN bigWig fold change over control ENCSR194IJN ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF766-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF227TEG, ENCFF321YGO 501667498 ENCODE Processing Pipeline c97ea3e3eb9b228cd28451a88fce4e05 https://www.encodeproject.org/files/ENCFF767WEN/@@download/ENCFF767WEN.bigWig GRCh38 released missing genetic modification characterization ENCFF120BJN bigWig signal p-value ENCSR194IJN ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF766-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF227TEG, ENCFF321YGO, ENCFF398UYF 489435261 ENCODE Processing Pipeline 3a67ab333ddb1c866af0b20912908161 https://www.encodeproject.org/files/ENCFF120BJN/@@download/ENCFF120BJN.bigWig GRCh38 released missing genetic modification characterization ENCFF407NIT bigWig fold change over control ENCSR194IJN ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF766-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF321YGO, ENCFF398UYF 518480234 ENCODE Processing Pipeline aa0183628c1018fa9d5a4f7f1ea7b387 https://www.encodeproject.org/files/ENCFF407NIT/@@download/ENCFF407NIT.bigWig GRCh38 released missing genetic modification characterization ENCFF683YFE bigWig signal p-value ENCSR194IJN ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF766-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF227TEG, ENCFF321YGO 499981990 ENCODE Processing Pipeline 0fc2486208cf76f427992bf45318756d https://www.encodeproject.org/files/ENCFF683YFE/@@download/ENCFF683YFE.bigWig GRCh38 released missing genetic modification characterization ENCFF082UPZ bigWig fold change over control ENCSR194IJN ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF766-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF227TEG, ENCFF321YGO, ENCFF398UYF 800990123 ENCODE Processing Pipeline 174499424cf76d2ff5c18832305d5bae https://www.encodeproject.org/files/ENCFF082UPZ/@@download/ENCFF082UPZ.bigWig GRCh38 released missing genetic modification characterization ENCFF061LHW bed narrowPeak peaks ENCSR194IJN ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF766-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF321YGO, ENCFF398UYF 6356677 ENCODE Processing Pipeline f3c07592e6c320e6d26ce5944b09d387 https://www.encodeproject.org/files/ENCFF061LHW/@@download/ENCFF061LHW.bed.gz GRCh38 released missing genetic modification characterization ENCFF587AOA bigBed narrowPeak peaks ENCSR194IJN ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF766-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF061LHW 12969800 ENCODE Processing Pipeline ad096c9f8eb44941def6b2c7500222d3 https://www.encodeproject.org/files/ENCFF587AOA/@@download/ENCFF587AOA.bigBed GRCh38 released missing genetic modification characterization ENCFF822RHV bigBed narrowPeak peaks ENCSR194IJN ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF766-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF528UAD 12885600 ENCODE Processing Pipeline bc2a2bf539092873c392b5cdcc29f710 https://www.encodeproject.org/files/ENCFF822RHV/@@download/ENCFF822RHV.bigBed GRCh38 released missing genetic modification characterization ENCFF528UAD bed narrowPeak peaks ENCSR194IJN ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF766-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF227TEG, ENCFF321YGO 6404704 ENCODE Processing Pipeline 3bb9e6793cea75259ed205c93f2ceafe https://www.encodeproject.org/files/ENCFF528UAD/@@download/ENCFF528UAD.bed.gz GRCh38 released missing genetic modification characterization ENCFF153AXV bed narrowPeak peaks ENCSR194IJN ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF766-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF227TEG, ENCFF321YGO, ENCFF398UYF 6952064 ENCODE Processing Pipeline 45b6f69cf629eb6ff4ab6f509feea49e https://www.encodeproject.org/files/ENCFF153AXV/@@download/ENCFF153AXV.bed.gz GRCh38 released missing genetic modification characterization ENCFF184GRQ bigBed narrowPeak peaks ENCSR194IJN ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF766-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF153AXV 12900695 ENCODE Processing Pipeline e899f4278055c706211c2817dbcbabfd https://www.encodeproject.org/files/ENCFF184GRQ/@@download/ENCFF184GRQ.bigBed GRCh38 released missing genetic modification characterization ENCFF045ENB bigBed narrowPeak optimal idr thresholded peaks ENCSR194IJN ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF766-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF168PYI 1071549 ENCODE Processing Pipeline 27d7979ff2cab85fbb76e05942794927 https://www.encodeproject.org/files/ENCFF045ENB/@@download/ENCFF045ENB.bigBed GRCh38 released missing genetic modification characterization ENCFF168PYI bed narrowPeak optimal idr thresholded peaks ENCSR194IJN ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF766-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF061LHW, ENCFF153AXV, ENCFF419RSJ, ENCFF528UAD 484763 ENCODE Processing Pipeline 211b66d0c8bb0ae5a04fb5856233f719 https://www.encodeproject.org/files/ENCFF168PYI/@@download/ENCFF168PYI.bed.gz GRCh38 released missing genetic modification characterization ENCFF248AOD bed narrowPeak optimal idr thresholded peaks ENCSR194IJN ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF766-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF001TDO, ENCFF040CEH, ENCFF205LAU, ENCFF908JEV 405344 ENCODE Processing Pipeline 2b29bf3d96987a1477ec6855a06b7040 https://www.encodeproject.org/files/ENCFF248AOD/@@download/ENCFF248AOD.bed.gz hg19 released missing genetic modification characterization ENCFF715ZYG bigBed narrowPeak optimal idr thresholded peaks ENCSR194IJN ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF766-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF248AOD 771468 ENCODE Processing Pipeline e351259e1c6b4505408a431862748604 https://www.encodeproject.org/files/ENCFF715ZYG/@@download/ENCFF715ZYG.bigBed hg19 released missing genetic modification characterization ENCFF654PBV bam unfiltered alignments ENCSR412CTM ChIP-seq EFO:0002067 K562 cell line Homo sapiens SUZ12-human ENCAB000BEB DNA False 2016-06-14 ENCODE 1 36 ENCFF002EWO, ENCFF807MUK 1313279614 ENCODE Processing Pipeline 32e1b6aa99996e75850471c171b07ba6 https://www.encodeproject.org/files/ENCFF654PBV/@@download/ENCFF654PBV.bam hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length ENCFF300WMV bam unfiltered alignments ENCSR412CTM ChIP-seq EFO:0002067 K562 cell line Homo sapiens SUZ12-human ENCAB000BEB DNA False 2016-06-14 ENCODE 2 36 ENCFF002EWP, ENCFF807MUK 1110957074 ENCODE Processing Pipeline d72e7a13da3cd5c3080eecc3f68e6971 https://www.encodeproject.org/files/ENCFF300WMV/@@download/ENCFF300WMV.bam hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length ENCFF002EWO fastq reads ENCSR412CTM ChIP-seq EFO:0002067 K562 cell line Homo sapiens SUZ12-human ENCAB000BEB DNA False 2016-06-14 ENCODE 1 1 36 single-ended 914624230 Michael Snyder, Stanford 2e5392acfa04cb5307325c6cdbbcdc21 SRA:SRR5111559 https://www.encodeproject.org/files/ENCFF002EWO/@@download/ENCFF002EWO.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF002ECW/ released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length ENCFF002EWP fastq reads ENCSR412CTM ChIP-seq EFO:0002067 K562 cell line Homo sapiens SUZ12-human ENCAB000BEB DNA False 2016-06-14 ENCODE 2 1 36 single-ended 788351480 Michael Snyder, Stanford 0c81ea3a0bb9f5591c529ece24273c45 SRA:SRR5111558 https://www.encodeproject.org/files/ENCFF002EWP/@@download/ENCFF002EWP.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF002ECS/ released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length ENCFF558LSV bam alignments ENCSR412CTM ChIP-seq EFO:0002067 K562 cell line Homo sapiens SUZ12-human ENCAB000BEB DNA False 2016-06-14 ENCODE 2 36 ENCFF002EWP, ENCFF807MUK 742441469 ENCODE Processing Pipeline 128c1d68ff9da53fbb32ef7a85abdafc https://www.encodeproject.org/files/ENCFF558LSV/@@download/ENCFF558LSV.bam hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length ENCFF193XPY bam alignments ENCSR412CTM ChIP-seq EFO:0002067 K562 cell line Homo sapiens SUZ12-human ENCAB000BEB DNA False 2016-06-14 ENCODE 1 36 ENCFF002EWO, ENCFF807MUK 957621777 ENCODE Processing Pipeline 38bd003c8b0ac6f762e4f6741959950d https://www.encodeproject.org/files/ENCFF193XPY/@@download/ENCFF193XPY.bam hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length ENCFF838COE bigWig signal p-value ENCSR412CTM ChIP-seq EFO:0002067 K562 cell line Homo sapiens SUZ12-human ENCAB000BEB DNA False 2016-06-14 ENCODE 1 ENCFF193XPY, ENCFF335IPE 534226403 ENCODE Processing Pipeline acc5407e3d9df78f1ad3d79a911c91f9 https://www.encodeproject.org/files/ENCFF838COE/@@download/ENCFF838COE.bigWig hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length ENCFF590SYN bigWig signal p-value ENCSR412CTM ChIP-seq EFO:0002067 K562 cell line Homo sapiens SUZ12-human ENCAB000BEB DNA False 2016-06-14 ENCODE 1, 2 ENCFF193XPY, ENCFF335IPE, ENCFF558LSV, ENCFF879OQC 1056598453 ENCODE Processing Pipeline 20047c7c816aefeebc885948591cac9d https://www.encodeproject.org/files/ENCFF590SYN/@@download/ENCFF590SYN.bigWig hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length ENCFF247UON bigWig signal p-value ENCSR412CTM ChIP-seq EFO:0002067 K562 cell line Homo sapiens SUZ12-human ENCAB000BEB DNA False 2016-06-14 ENCODE 2 ENCFF558LSV, ENCFF879OQC 509628911 ENCODE Processing Pipeline 134475c980c9cace500da68cb509c6c4 https://www.encodeproject.org/files/ENCFF247UON/@@download/ENCFF247UON.bigWig hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length ENCFF052RBK bigWig fold change over control ENCSR412CTM ChIP-seq EFO:0002067 K562 cell line Homo sapiens SUZ12-human ENCAB000BEB DNA False 2016-06-14 ENCODE 1 ENCFF193XPY, ENCFF335IPE 507203378 ENCODE Processing Pipeline be5413c58506fea1b3d40e441f12d637 https://www.encodeproject.org/files/ENCFF052RBK/@@download/ENCFF052RBK.bigWig hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length ENCFF578MWF bigWig fold change over control ENCSR412CTM ChIP-seq EFO:0002067 K562 cell line Homo sapiens SUZ12-human ENCAB000BEB DNA False 2016-06-14 ENCODE 2 ENCFF558LSV, ENCFF879OQC 423964078 ENCODE Processing Pipeline bb685d92f2ad0bfcf134f474682e3bef https://www.encodeproject.org/files/ENCFF578MWF/@@download/ENCFF578MWF.bigWig hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length ENCFF363DWX bigWig fold change over control ENCSR412CTM ChIP-seq EFO:0002067 K562 cell line Homo sapiens SUZ12-human ENCAB000BEB DNA False 2016-06-14 ENCODE 1, 2 ENCFF193XPY, ENCFF335IPE, ENCFF558LSV, ENCFF879OQC 1035399103 ENCODE Processing Pipeline ff89b07a7e2c102a411dfbaf0bdec3bf https://www.encodeproject.org/files/ENCFF363DWX/@@download/ENCFF363DWX.bigWig hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length ENCFF009PGQ bed narrowPeak peaks ENCSR412CTM ChIP-seq EFO:0002067 K562 cell line Homo sapiens SUZ12-human ENCAB000BEB DNA False 2016-06-14 ENCODE 1 ENCFF193XPY, ENCFF335IPE 5075484 ENCODE Processing Pipeline f52779d780056f5dbc75289ced0e3718 https://www.encodeproject.org/files/ENCFF009PGQ/@@download/ENCFF009PGQ.bed.gz hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length ENCFF107SGI bed narrowPeak peaks ENCSR412CTM ChIP-seq EFO:0002067 K562 cell line Homo sapiens SUZ12-human ENCAB000BEB DNA False 2016-06-14 ENCODE 2 ENCFF558LSV, ENCFF879OQC 4674325 ENCODE Processing Pipeline 418758f943c545f62ba0589e070eb71f https://www.encodeproject.org/files/ENCFF107SGI/@@download/ENCFF107SGI.bed.gz hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length ENCFF341WWD bed narrowPeak peaks ENCSR412CTM ChIP-seq EFO:0002067 K562 cell line Homo sapiens SUZ12-human ENCAB000BEB DNA False 2016-06-14 ENCODE 1, 2 ENCFF193XPY, ENCFF335IPE, ENCFF558LSV, ENCFF879OQC 6343952 ENCODE Processing Pipeline ab0ae4464d6adbbf3a01041b345c4d12 https://www.encodeproject.org/files/ENCFF341WWD/@@download/ENCFF341WWD.bed.gz hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length ENCFF233QOR bigBed narrowPeak peaks ENCSR412CTM ChIP-seq EFO:0002067 K562 cell line Homo sapiens SUZ12-human ENCAB000BEB DNA False 2016-06-14 ENCODE 1 ENCFF009PGQ 11044412 ENCODE Processing Pipeline 80f8aafd3f2c4208c89b2c176d405be5 https://www.encodeproject.org/files/ENCFF233QOR/@@download/ENCFF233QOR.bigBed hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length ENCFF234FNY bigBed narrowPeak peaks ENCSR412CTM ChIP-seq EFO:0002067 K562 cell line Homo sapiens SUZ12-human ENCAB000BEB DNA False 2016-06-14 ENCODE 2 ENCFF107SGI 10946234 ENCODE Processing Pipeline f502939cb0b0616d24e69102b1bba888 https://www.encodeproject.org/files/ENCFF234FNY/@@download/ENCFF234FNY.bigBed hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length ENCFF902EJV bigBed narrowPeak peaks ENCSR412CTM ChIP-seq EFO:0002067 K562 cell line Homo sapiens SUZ12-human ENCAB000BEB DNA False 2016-06-14 ENCODE 1, 2 ENCFF341WWD 11237274 ENCODE Processing Pipeline e3c1c17fd0aa552a71c2b6091aff77e6 https://www.encodeproject.org/files/ENCFF902EJV/@@download/ENCFF902EJV.bigBed hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length ENCFF455NNI bam unfiltered alignments ENCSR412CTM ChIP-seq EFO:0002067 K562 cell line Homo sapiens SUZ12-human ENCAB000BEB DNA False 2016-06-14 ENCODE 1 36 ENCFF002EWO, ENCFF643CGH 1318428232 ENCODE Processing Pipeline 627fc20eeeac13800d2e1df12e4db76f https://www.encodeproject.org/files/ENCFF455NNI/@@download/ENCFF455NNI.bam GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length ENCFF328YTB bam unfiltered alignments ENCSR412CTM ChIP-seq EFO:0002067 K562 cell line Homo sapiens SUZ12-human ENCAB000BEB DNA False 2016-06-14 ENCODE 2 36 ENCFF002EWP, ENCFF643CGH 1115746077 ENCODE Processing Pipeline b6cee24f70c67b0a622a77792abdb30d https://www.encodeproject.org/files/ENCFF328YTB/@@download/ENCFF328YTB.bam GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length ENCFF986KSB bam alignments ENCSR412CTM ChIP-seq EFO:0002067 K562 cell line Homo sapiens SUZ12-human ENCAB000BEB DNA False 2016-06-14 ENCODE 1 36 ENCFF002EWO, ENCFF643CGH 957001469 ENCODE Processing Pipeline 293ce2364699cd94930a89b7c618fbf6 https://www.encodeproject.org/files/ENCFF986KSB/@@download/ENCFF986KSB.bam GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length ENCFF614RBF bam alignments ENCSR412CTM ChIP-seq EFO:0002067 K562 cell line Homo sapiens SUZ12-human ENCAB000BEB DNA False 2016-06-14 ENCODE 2 36 ENCFF002EWP, ENCFF643CGH 741857199 ENCODE Processing Pipeline e311ed619537544f39062f1a3ea6b5ae https://www.encodeproject.org/files/ENCFF614RBF/@@download/ENCFF614RBF.bam GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length ENCFF708NMD bigWig signal p-value ENCSR412CTM ChIP-seq EFO:0002067 K562 cell line Homo sapiens SUZ12-human ENCAB000BEB DNA False 2016-06-14 ENCODE 1 ENCFF156FED, ENCFF986KSB 498881183 ENCODE Processing Pipeline 0815b2d3c862908415a3a9d612df6a2e https://www.encodeproject.org/files/ENCFF708NMD/@@download/ENCFF708NMD.bigWig GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length ENCFF251EGL bigWig signal p-value ENCSR412CTM ChIP-seq EFO:0002067 K562 cell line Homo sapiens SUZ12-human ENCAB000BEB DNA False 2016-06-14 ENCODE 2 ENCFF577FNG, ENCFF614RBF 452851844 ENCODE Processing Pipeline 54163c176aeb9d2e70f4336dc0f57c8b https://www.encodeproject.org/files/ENCFF251EGL/@@download/ENCFF251EGL.bigWig GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length ENCFF239QWU bigWig signal p-value ENCSR412CTM ChIP-seq EFO:0002067 K562 cell line Homo sapiens SUZ12-human ENCAB000BEB DNA False 2016-06-14 ENCODE 1, 2 ENCFF156FED, ENCFF577FNG, ENCFF614RBF, ENCFF986KSB 1115527092 ENCODE Processing Pipeline 31165fbed096b4fc14e8761d3354dd25 https://www.encodeproject.org/files/ENCFF239QWU/@@download/ENCFF239QWU.bigWig GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length ENCFF065KGU bigWig fold change over control ENCSR412CTM ChIP-seq EFO:0002067 K562 cell line Homo sapiens SUZ12-human ENCAB000BEB DNA False 2016-06-14 ENCODE 1 ENCFF156FED, ENCFF986KSB 508175214 ENCODE Processing Pipeline 1e88bdd459c5daed09ef3d02688a9115 https://www.encodeproject.org/files/ENCFF065KGU/@@download/ENCFF065KGU.bigWig GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length ENCFF921KZU bigWig fold change over control ENCSR412CTM ChIP-seq EFO:0002067 K562 cell line Homo sapiens SUZ12-human ENCAB000BEB DNA False 2016-06-14 ENCODE 2 ENCFF577FNG, ENCFF614RBF 428422235 ENCODE Processing Pipeline 62aafb4314c159bcab077fca90b26eec https://www.encodeproject.org/files/ENCFF921KZU/@@download/ENCFF921KZU.bigWig GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length ENCFF394JNY bed narrowPeak peaks ENCSR412CTM ChIP-seq EFO:0002067 K562 cell line Homo sapiens SUZ12-human ENCAB000BEB DNA False 2016-06-14 ENCODE 1 ENCFF156FED, ENCFF986KSB 4730069 ENCODE Processing Pipeline 6b16f83ead995b6253574abddec44076 https://www.encodeproject.org/files/ENCFF394JNY/@@download/ENCFF394JNY.bed.gz GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length ENCFF417FWT bigWig fold change over control ENCSR412CTM ChIP-seq EFO:0002067 K562 cell line Homo sapiens SUZ12-human ENCAB000BEB DNA False 2016-06-14 ENCODE 1, 2 ENCFF156FED, ENCFF577FNG, ENCFF614RBF, ENCFF986KSB 1026079146 ENCODE Processing Pipeline 18447263a524bdaecc912d254b3d16d0 https://www.encodeproject.org/files/ENCFF417FWT/@@download/ENCFF417FWT.bigWig GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length ENCFF732IJX bed narrowPeak peaks ENCSR412CTM ChIP-seq EFO:0002067 K562 cell line Homo sapiens SUZ12-human ENCAB000BEB DNA False 2016-06-14 ENCODE 2 ENCFF577FNG, ENCFF614RBF 4393904 ENCODE Processing Pipeline 063d7843577a6d9c248ca77bc53d7dda https://www.encodeproject.org/files/ENCFF732IJX/@@download/ENCFF732IJX.bed.gz GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length ENCFF241NZQ bed narrowPeak peaks ENCSR412CTM ChIP-seq EFO:0002067 K562 cell line Homo sapiens SUZ12-human ENCAB000BEB DNA False 2016-06-14 ENCODE 1, 2 ENCFF156FED, ENCFF577FNG, ENCFF614RBF, ENCFF986KSB 6125622 ENCODE Processing Pipeline 78b6453885d6304b984e633d2aadffd9 https://www.encodeproject.org/files/ENCFF241NZQ/@@download/ENCFF241NZQ.bed.gz GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length ENCFF419GVG bigBed narrowPeak peaks ENCSR412CTM ChIP-seq EFO:0002067 K562 cell line Homo sapiens SUZ12-human ENCAB000BEB DNA False 2016-06-14 ENCODE 1 ENCFF394JNY 10929557 ENCODE Processing Pipeline e460fc2da49bebd3d9e2b469035e7148 https://www.encodeproject.org/files/ENCFF419GVG/@@download/ENCFF419GVG.bigBed GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length ENCFF107KUK bigBed narrowPeak peaks ENCSR412CTM ChIP-seq EFO:0002067 K562 cell line Homo sapiens SUZ12-human ENCAB000BEB DNA False 2016-06-14 ENCODE 2 ENCFF732IJX 10720555 ENCODE Processing Pipeline 5c35621c97a2a44a73349a3b86c9edca https://www.encodeproject.org/files/ENCFF107KUK/@@download/ENCFF107KUK.bigBed GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length ENCFF989LFF bigBed narrowPeak peaks ENCSR412CTM ChIP-seq EFO:0002067 K562 cell line Homo sapiens SUZ12-human ENCAB000BEB DNA False 2016-06-14 ENCODE 1, 2 ENCFF241NZQ 11223473 ENCODE Processing Pipeline 9348d0e9977f69f1b75839a74d1dac11 https://www.encodeproject.org/files/ENCFF989LFF/@@download/ENCFF989LFF.bigBed GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length ENCFF687WTM bigBed narrowPeak optimal idr thresholded peaks ENCSR412CTM ChIP-seq EFO:0002067 K562 cell line Homo sapiens SUZ12-human ENCAB000BEB DNA False 2016-06-14 ENCODE 1, 2 ENCFF856HYC 134175 ENCODE Processing Pipeline 4c2d950a6cb4dd85ccbe832ccbd0771c https://www.encodeproject.org/files/ENCFF687WTM/@@download/ENCFF687WTM.bigBed GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length ENCFF856HYC bed narrowPeak optimal idr thresholded peaks ENCSR412CTM ChIP-seq EFO:0002067 K562 cell line Homo sapiens SUZ12-human ENCAB000BEB DNA False 2016-06-14 ENCODE 1, 2 ENCFF241NZQ, ENCFF394JNY, ENCFF419RSJ, ENCFF732IJX 43926 ENCODE Processing Pipeline 9aeff388cdd3efa63a663f43f6a37be8 https://www.encodeproject.org/files/ENCFF856HYC/@@download/ENCFF856HYC.bed.gz GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length ENCFF319JHV bed narrowPeak conservative idr thresholded peaks ENCSR412CTM ChIP-seq EFO:0002067 K562 cell line Homo sapiens SUZ12-human ENCAB000BEB DNA False 2016-06-14 ENCODE 1, 2 ENCFF001TDO, ENCFF009PGQ, ENCFF107SGI, ENCFF341WWD 39703 ENCODE Processing Pipeline bdce8eaebe3e5c93ab99ea062fbdb1e0 https://www.encodeproject.org/files/ENCFF319JHV/@@download/ENCFF319JHV.bed.gz hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length ENCFF276MCV bigBed narrowPeak conservative idr thresholded peaks ENCSR412CTM ChIP-seq EFO:0002067 K562 cell line Homo sapiens SUZ12-human ENCAB000BEB DNA False 2016-06-14 ENCODE 1, 2 ENCFF319JHV 104483 ENCODE Processing Pipeline e1070614b7bfa7eb19a9bb1ab27dc737 https://www.encodeproject.org/files/ENCFF276MCV/@@download/ENCFF276MCV.bigBed hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length ENCFF966MVC bed narrowPeak optimal idr thresholded peaks ENCSR412CTM ChIP-seq EFO:0002067 K562 cell line Homo sapiens SUZ12-human ENCAB000BEB DNA False 2016-06-14 ENCODE 1, 2 ENCFF001TDO, ENCFF009PGQ, ENCFF107SGI, ENCFF341WWD 45116 ENCODE Processing Pipeline 1567fb3dc23551e8036656e989bcb56f https://www.encodeproject.org/files/ENCFF966MVC/@@download/ENCFF966MVC.bed.gz hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length ENCFF565PAP bigBed narrowPeak optimal idr thresholded peaks ENCSR412CTM ChIP-seq EFO:0002067 K562 cell line Homo sapiens SUZ12-human ENCAB000BEB DNA False 2016-06-14 ENCODE 1, 2 ENCFF966MVC 135655 ENCODE Processing Pipeline ae2c8c249a350731d7fa279384e5beda https://www.encodeproject.org/files/ENCFF565PAP/@@download/ENCFF565PAP.bigBed hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length ENCFF813EAV bam unfiltered alignments ENCSR448UKK ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZKSCAN8-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 50 ENCFF369FNW, ENCFF489GQR, ENCFF807MUK 2120229349 ENCODE Processing Pipeline 58f97da00a42f85fc2dafa1c1eab0958 https://www.encodeproject.org/files/ENCFF813EAV/@@download/ENCFF813EAV.bam hg19 released missing genetic modification characterization ENCFF648MOC bam unfiltered alignments ENCSR448UKK ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZKSCAN8-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 50 ENCFF591FKI, ENCFF763BLG, ENCFF807MUK 1749577656 ENCODE Processing Pipeline 12c23984f4e4c6c3da490045bb47cebe https://www.encodeproject.org/files/ENCFF648MOC/@@download/ENCFF648MOC.bam hg19 released missing genetic modification characterization ENCFF489GQR fastq reads ENCSR448UKK ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZKSCAN8-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 1 50 single-ended 650266007 Kevin White, UChicago d691d2490b6fe28e6ae5ce043284ec59 SRA:SRR6213565 https://www.encodeproject.org/files/ENCFF489GQR/@@download/ENCFF489GQR.fastq.gz Illumina HiSeq 2500 /files/ENCFF406IWG/, /files/ENCFF552UHO/ released missing genetic modification characterization ENCFF763BLG fastq reads ENCSR448UKK ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZKSCAN8-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 1 50 single-ended 813222586 Kevin White, UChicago a5afda0f5ca25f3da7910f603cdcc6ce SRA:SRR6213563 https://www.encodeproject.org/files/ENCFF763BLG/@@download/ENCFF763BLG.fastq.gz Illumina HiSeq 2000 /files/ENCFF406IWG/, /files/ENCFF552UHO/ released missing genetic modification characterization ENCFF591FKI fastq reads ENCSR448UKK ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZKSCAN8-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 1 50 single-ended 789905897 Kevin White, UChicago f5675a1117868d60f0680da26838b010 SRA:SRR6213564 https://www.encodeproject.org/files/ENCFF591FKI/@@download/ENCFF591FKI.fastq.gz Illumina HiSeq 2000 /files/ENCFF406IWG/, /files/ENCFF552UHO/ released missing genetic modification characterization ENCFF369FNW fastq reads ENCSR448UKK ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZKSCAN8-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 1 50 single-ended 1308254937 Kevin White, UChicago acf70cdbda9964c06870adcd9abcd8d6 SRA:SRR6213566 https://www.encodeproject.org/files/ENCFF369FNW/@@download/ENCFF369FNW.fastq.gz Illumina HiSeq 2500 /files/ENCFF406IWG/, /files/ENCFF552UHO/ released missing genetic modification characterization ENCFF508ZDE bam alignments ENCSR448UKK ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZKSCAN8-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 50 ENCFF591FKI, ENCFF763BLG, ENCFF807MUK 1320069612 ENCODE Processing Pipeline d14b8113c8f486873823a046df5cc8b0 https://www.encodeproject.org/files/ENCFF508ZDE/@@download/ENCFF508ZDE.bam hg19 released missing genetic modification characterization ENCFF473TXL bam alignments ENCSR448UKK ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZKSCAN8-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 50 ENCFF369FNW, ENCFF489GQR, ENCFF807MUK 1600592530 ENCODE Processing Pipeline b6f4dad460cf4cd0bdaae464b62ec521 https://www.encodeproject.org/files/ENCFF473TXL/@@download/ENCFF473TXL.bam hg19 released missing genetic modification characterization ENCFF041LCC bigWig signal p-value ENCSR448UKK ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZKSCAN8-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF266VDG, ENCFF473TXL 809076470 ENCODE Processing Pipeline ab694bc70bd8101ea62d2645c815f721 https://www.encodeproject.org/files/ENCFF041LCC/@@download/ENCFF041LCC.bigWig hg19 released missing genetic modification characterization ENCFF106SAA bigWig signal p-value ENCSR448UKK ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZKSCAN8-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF266VDG, ENCFF508ZDE 624236420 ENCODE Processing Pipeline ceeea2ed7f8c75e7fdb89282caefe6ca https://www.encodeproject.org/files/ENCFF106SAA/@@download/ENCFF106SAA.bigWig hg19 released missing genetic modification characterization ENCFF175SWA bigWig signal p-value ENCSR448UKK ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZKSCAN8-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF266VDG, ENCFF473TXL, ENCFF508ZDE 1004203051 ENCODE Processing Pipeline c5883662c66d3050519916bf306e067b https://www.encodeproject.org/files/ENCFF175SWA/@@download/ENCFF175SWA.bigWig hg19 released missing genetic modification characterization ENCFF641MUP bigWig fold change over control ENCSR448UKK ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZKSCAN8-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF266VDG, ENCFF473TXL 873650154 ENCODE Processing Pipeline 175993f51b906f209403ef2595367f75 https://www.encodeproject.org/files/ENCFF641MUP/@@download/ENCFF641MUP.bigWig hg19 released missing genetic modification characterization ENCFF343TEX bigBed narrowPeak peaks ENCSR448UKK ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZKSCAN8-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF839IXS 12927959 ENCODE Processing Pipeline d77db6c73c4fa79f2fe7ea1dc5f5f46f https://www.encodeproject.org/files/ENCFF343TEX/@@download/ENCFF343TEX.bigBed hg19 released missing genetic modification characterization ENCFF839IXS bed narrowPeak peaks ENCSR448UKK ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZKSCAN8-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF266VDG, ENCFF508ZDE 6931086 ENCODE Processing Pipeline 8fe562fb6aaa19115d0302efb4fe971e https://www.encodeproject.org/files/ENCFF839IXS/@@download/ENCFF839IXS.bed.gz hg19 released missing genetic modification characterization ENCFF115HSX bigWig fold change over control ENCSR448UKK ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZKSCAN8-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF266VDG, ENCFF508ZDE 732382494 ENCODE Processing Pipeline 64bd11d561b2eebfa5c2755805a9ece1 https://www.encodeproject.org/files/ENCFF115HSX/@@download/ENCFF115HSX.bigWig hg19 released missing genetic modification characterization ENCFF029MZM bigWig fold change over control ENCSR448UKK ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZKSCAN8-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF266VDG, ENCFF473TXL, ENCFF508ZDE 1191206201 ENCODE Processing Pipeline 66d05bee3478817e4313d4aa14ffae73 https://www.encodeproject.org/files/ENCFF029MZM/@@download/ENCFF029MZM.bigWig hg19 released missing genetic modification characterization ENCFF189OTW bigBed narrowPeak peaks ENCSR448UKK ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZKSCAN8-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF234TBD 12773056 ENCODE Processing Pipeline 92f28e3e54e25bf142e3328e4210dac5 https://www.encodeproject.org/files/ENCFF189OTW/@@download/ENCFF189OTW.bigBed hg19 released missing genetic modification characterization ENCFF980ZNH bigBed narrowPeak peaks ENCSR448UKK ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZKSCAN8-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF603LKQ 12712958 ENCODE Processing Pipeline 81fdd74e781cf19f5b0790761c7fe90a https://www.encodeproject.org/files/ENCFF980ZNH/@@download/ENCFF980ZNH.bigBed hg19 released missing genetic modification characterization ENCFF603LKQ bed narrowPeak peaks ENCSR448UKK ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZKSCAN8-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF266VDG, ENCFF473TXL 7251822 ENCODE Processing Pipeline a4ffb0ad4ba13a89b18dbdf27735fbf2 https://www.encodeproject.org/files/ENCFF603LKQ/@@download/ENCFF603LKQ.bed.gz hg19 released missing genetic modification characterization ENCFF234TBD bed narrowPeak peaks ENCSR448UKK ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZKSCAN8-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF266VDG, ENCFF473TXL, ENCFF508ZDE 7326429 ENCODE Processing Pipeline fcabb37727935fcfa29107e5fa7be922 https://www.encodeproject.org/files/ENCFF234TBD/@@download/ENCFF234TBD.bed.gz hg19 released missing genetic modification characterization ENCFF298APG bam unfiltered alignments ENCSR448UKK ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZKSCAN8-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 50 ENCFF591FKI, ENCFF643CGH, ENCFF763BLG 1755151482 ENCODE Processing Pipeline 3279465e1ac96b61de1b9435bba4019c https://www.encodeproject.org/files/ENCFF298APG/@@download/ENCFF298APG.bam GRCh38 released missing genetic modification characterization ENCFF867NNE bam unfiltered alignments ENCSR448UKK ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZKSCAN8-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 50 ENCFF369FNW, ENCFF489GQR, ENCFF643CGH 2128271306 ENCODE Processing Pipeline f5785dffc3b5dc308c4f4e6a1b6405eb https://www.encodeproject.org/files/ENCFF867NNE/@@download/ENCFF867NNE.bam GRCh38 released missing genetic modification characterization ENCFF811CBJ bam alignments ENCSR448UKK ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZKSCAN8-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 50 ENCFF591FKI, ENCFF643CGH, ENCFF763BLG 1319426906 ENCODE Processing Pipeline 3fda5edadf9bb7ad92783101437dd342 https://www.encodeproject.org/files/ENCFF811CBJ/@@download/ENCFF811CBJ.bam GRCh38 released missing genetic modification characterization ENCFF413VAR bam alignments ENCSR448UKK ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZKSCAN8-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 50 ENCFF369FNW, ENCFF489GQR, ENCFF643CGH 1599928946 ENCODE Processing Pipeline 76ba98a993cafbe4541aae5600d6a2b7 https://www.encodeproject.org/files/ENCFF413VAR/@@download/ENCFF413VAR.bam GRCh38 released missing genetic modification characterization ENCFF396NMI bigWig signal p-value ENCSR448UKK ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZKSCAN8-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF228COG, ENCFF413VAR 907649200 ENCODE Processing Pipeline dea36319e69cfd4c57ed49eaa88b41c8 https://www.encodeproject.org/files/ENCFF396NMI/@@download/ENCFF396NMI.bigWig GRCh38 released missing genetic modification characterization ENCFF103UOG bigWig signal p-value ENCSR448UKK ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZKSCAN8-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF228COG, ENCFF413VAR, ENCFF811CBJ 1015566465 ENCODE Processing Pipeline 33308ae2ddb7e456cce7aedfd0edef21 https://www.encodeproject.org/files/ENCFF103UOG/@@download/ENCFF103UOG.bigWig GRCh38 released missing genetic modification characterization ENCFF145RLX bigWig signal p-value ENCSR448UKK ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZKSCAN8-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF228COG, ENCFF811CBJ 658613971 ENCODE Processing Pipeline 036d5316f2abc4ca784007b256f21807 https://www.encodeproject.org/files/ENCFF145RLX/@@download/ENCFF145RLX.bigWig GRCh38 released missing genetic modification characterization ENCFF783PIT bigWig fold change over control ENCSR448UKK ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZKSCAN8-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF228COG, ENCFF413VAR 854528632 ENCODE Processing Pipeline 02fdbf333aff30155d8f0a246ae70fe1 https://www.encodeproject.org/files/ENCFF783PIT/@@download/ENCFF783PIT.bigWig GRCh38 released missing genetic modification characterization ENCFF928FDU bigWig fold change over control ENCSR448UKK ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZKSCAN8-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF228COG, ENCFF811CBJ 737561078 ENCODE Processing Pipeline 85ffd3a5328d70424f8595f89ed90f25 https://www.encodeproject.org/files/ENCFF928FDU/@@download/ENCFF928FDU.bigWig GRCh38 released missing genetic modification characterization ENCFF447WWY bigWig fold change over control ENCSR448UKK ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZKSCAN8-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF228COG, ENCFF413VAR, ENCFF811CBJ 1204101150 ENCODE Processing Pipeline 38eae1edd7e804748a64a3f5b98665e0 https://www.encodeproject.org/files/ENCFF447WWY/@@download/ENCFF447WWY.bigWig GRCh38 released missing genetic modification characterization ENCFF430VKO bed narrowPeak peaks ENCSR448UKK ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZKSCAN8-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF228COG, ENCFF811CBJ 6766996 ENCODE Processing Pipeline 8bee2bbf93f7a7cafc6066963ef7d776 https://www.encodeproject.org/files/ENCFF430VKO/@@download/ENCFF430VKO.bed.gz GRCh38 released missing genetic modification characterization ENCFF161HQY bed narrowPeak conservative idr thresholded peaks ENCSR448UKK ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZKSCAN8-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF419RSJ, ENCFF430VKO, ENCFF570SZP, ENCFF849NZN 166554 ENCODE Processing Pipeline c175dfd706b74d424680b547899b9fd1 https://www.encodeproject.org/files/ENCFF161HQY/@@download/ENCFF161HQY.bed.gz GRCh38 released missing genetic modification characterization ENCFF849NZN bed narrowPeak peaks ENCSR448UKK ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZKSCAN8-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF228COG, ENCFF413VAR 7165845 ENCODE Processing Pipeline aba382f51e9a7cf5086dd2dafb4d373f https://www.encodeproject.org/files/ENCFF849NZN/@@download/ENCFF849NZN.bed.gz GRCh38 released missing genetic modification characterization ENCFF662IGC bigBed narrowPeak peaks ENCSR448UKK ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZKSCAN8-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF849NZN 12723227 ENCODE Processing Pipeline 2502866ff1643fa474ef448e3d9e8264 https://www.encodeproject.org/files/ENCFF662IGC/@@download/ENCFF662IGC.bigBed GRCh38 released missing genetic modification characterization ENCFF178TKV bigBed narrowPeak peaks ENCSR448UKK ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZKSCAN8-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF430VKO 12942556 ENCODE Processing Pipeline e706b5e3fe323ae748c2fe47c32623a8 https://www.encodeproject.org/files/ENCFF178TKV/@@download/ENCFF178TKV.bigBed GRCh38 released missing genetic modification characterization ENCFF413VDU bigBed narrowPeak peaks ENCSR448UKK ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZKSCAN8-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF570SZP 12771645 ENCODE Processing Pipeline eb897f7135583455b6a27c33e2c6d19b https://www.encodeproject.org/files/ENCFF413VDU/@@download/ENCFF413VDU.bigBed GRCh38 released missing genetic modification characterization ENCFF570SZP bed narrowPeak peaks ENCSR448UKK ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZKSCAN8-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF228COG, ENCFF413VAR, ENCFF811CBJ 7288416 ENCODE Processing Pipeline eca6968170fa32a7d2dc5df8decce44b https://www.encodeproject.org/files/ENCFF570SZP/@@download/ENCFF570SZP.bed.gz GRCh38 released missing genetic modification characterization ENCFF977QPH bigBed narrowPeak conservative idr thresholded peaks ENCSR448UKK ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZKSCAN8-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF161HQY 436646 ENCODE Processing Pipeline 7f63c849af4b08b37dcaf7ab1ce9263b https://www.encodeproject.org/files/ENCFF977QPH/@@download/ENCFF977QPH.bigBed GRCh38 released missing genetic modification characterization ENCFF881VGY bigBed narrowPeak optimal idr thresholded peaks ENCSR448UKK ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZKSCAN8-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF648HOK 526778 ENCODE Processing Pipeline e59d662ed6f1444724cde96bce51cd5a https://www.encodeproject.org/files/ENCFF881VGY/@@download/ENCFF881VGY.bigBed GRCh38 released missing genetic modification characterization ENCFF648HOK bed narrowPeak optimal idr thresholded peaks ENCSR448UKK ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZKSCAN8-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF419RSJ, ENCFF430VKO, ENCFF570SZP, ENCFF849NZN 213653 ENCODE Processing Pipeline 1aa554ff2ac7994786b4decb81308679 https://www.encodeproject.org/files/ENCFF648HOK/@@download/ENCFF648HOK.bed.gz GRCh38 released missing genetic modification characterization ENCFF532EKD bam alignments ENCSR448UKK ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZKSCAN8-human ENCAB728YTO DNA False 2016-06-13 ENCODE 5581717446 Sunduz Keles, UW-M 3d943fe25fafbe60370480fe56ceecc6 https://www.encodeproject.org/files/ENCFF532EKD/@@download/ENCFF532EKD.bam hg19 released missing genetic modification characterization missing derived_from ENCFF522RGI bigBed narrowPeak conservative idr thresholded peaks ENCSR448UKK ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZKSCAN8-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF115ZHW 324851 ENCODE Processing Pipeline 65487b1e056e326705a6fe6e32db2673 https://www.encodeproject.org/files/ENCFF522RGI/@@download/ENCFF522RGI.bigBed hg19 released missing genetic modification characterization ENCFF115ZHW bed narrowPeak conservative idr thresholded peaks ENCSR448UKK ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZKSCAN8-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF001TDO, ENCFF234TBD, ENCFF603LKQ, ENCFF839IXS 131928 ENCODE Processing Pipeline 208e7ad0aae49e44f9e58beff4c86991 https://www.encodeproject.org/files/ENCFF115ZHW/@@download/ENCFF115ZHW.bed.gz hg19 released missing genetic modification characterization ENCFF494SQE bigBed narrowPeak optimal idr thresholded peaks ENCSR448UKK ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZKSCAN8-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF529FWJ 394902 ENCODE Processing Pipeline 0a6388961bb4adbfa0c7ad3fa54b2cff https://www.encodeproject.org/files/ENCFF494SQE/@@download/ENCFF494SQE.bigBed hg19 released missing genetic modification characterization ENCFF529FWJ bed narrowPeak optimal idr thresholded peaks ENCSR448UKK ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZKSCAN8-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF001TDO, ENCFF234TBD, ENCFF603LKQ, ENCFF839IXS 176626 ENCODE Processing Pipeline 7207f9b5dcf5b4248227451b79664f04 https://www.encodeproject.org/files/ENCFF529FWJ/@@download/ENCFF529FWJ.bed.gz hg19 released missing genetic modification characterization ENCFF398PMO bam unfiltered alignments ENCSR263DFP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-PBX2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 2 100 ENCFF176RUD, ENCFF793URQ, ENCFF807MUK 3642955118 ENCODE Processing Pipeline 400b6b4b77b0b4a48e8b89ba52c2e78a https://www.encodeproject.org/files/ENCFF398PMO/@@download/ENCFF398PMO.bam hg19 released missing genetic modification characterization, low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF948NVQ bam unfiltered alignments ENCSR263DFP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-PBX2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1 100 ENCFF410UIX, ENCFF807MUK, ENCFF932THV 5029338554 ENCODE Processing Pipeline 7cf49bd6d9fac81a78a3f8566d457ab8 https://www.encodeproject.org/files/ENCFF948NVQ/@@download/ENCFF948NVQ.bam hg19 released missing genetic modification characterization, low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF793URQ fastq reads ENCSR263DFP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-PBX2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 2 1 100 paired-ended 2 ENCFF176RUD 1763530336 Michael Snyder, Stanford 534d49bbde0c3cabcf67bef894df81f6 SRA:SRR5111350 https://www.encodeproject.org/files/ENCFF793URQ/@@download/ENCFF793URQ.fastq.gz Illumina HiSeq 2000 /files/ENCFF417ORB/, /files/ENCFF839JCV/ released missing genetic modification characterization, low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF176RUD fastq reads ENCSR263DFP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-PBX2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 2 1 100 paired-ended 1 ENCFF793URQ 1727929446 Michael Snyder, Stanford ffab989c20d7825f8c88ad33e4e127c0 SRA:SRR5111350 https://www.encodeproject.org/files/ENCFF176RUD/@@download/ENCFF176RUD.fastq.gz Illumina HiSeq 2000 /files/ENCFF417ORB/, /files/ENCFF839JCV/ released missing genetic modification characterization, low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF932THV fastq reads ENCSR263DFP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-PBX2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1 1 100 paired-ended 1 ENCFF410UIX 2370165590 Michael Snyder, Stanford 0c73d81fe92377f5a582612a18b775d2 SRA:SRR5111351 https://www.encodeproject.org/files/ENCFF932THV/@@download/ENCFF932THV.fastq.gz Illumina HiSeq 2000 /files/ENCFF417ORB/, /files/ENCFF839JCV/ released missing genetic modification characterization, low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF410UIX fastq reads ENCSR263DFP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-PBX2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1 1 100 paired-ended 2 ENCFF932THV 2431013071 Michael Snyder, Stanford 566e5dfcea248238755fe8289b734cee SRA:SRR5111351 https://www.encodeproject.org/files/ENCFF410UIX/@@download/ENCFF410UIX.fastq.gz Illumina HiSeq 2000 /files/ENCFF417ORB/, /files/ENCFF839JCV/ released missing genetic modification characterization, low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF373IJK bam alignments ENCSR263DFP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-PBX2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 2 ENCFF176RUD, ENCFF793URQ, ENCFF807MUK 2603051587 ENCODE Processing Pipeline 2e09ab178a7d229421b1120bd114b79c https://www.encodeproject.org/files/ENCFF373IJK/@@download/ENCFF373IJK.bam hg19 released missing genetic modification characterization, low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF810SIO bam alignments ENCSR263DFP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-PBX2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1 ENCFF410UIX, ENCFF807MUK, ENCFF932THV 3664764124 ENCODE Processing Pipeline 348f39e6abf9a2abbd8ecc08aafb9df5 https://www.encodeproject.org/files/ENCFF810SIO/@@download/ENCFF810SIO.bam hg19 released missing genetic modification characterization, low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF580QNQ bigWig signal p-value ENCSR263DFP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-PBX2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1 ENCFF419SJQ, ENCFF810SIO 900377972 ENCODE Processing Pipeline 7853371e6c74f8531efcd02694f20a58 https://www.encodeproject.org/files/ENCFF580QNQ/@@download/ENCFF580QNQ.bigWig hg19 released missing genetic modification characterization, low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF331DUV bigWig signal p-value ENCSR263DFP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-PBX2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 2 ENCFF373IJK, ENCFF419SJQ 952804942 ENCODE Processing Pipeline 9cd39af9edb18bfcaff4bbdcd2c14ff2 https://www.encodeproject.org/files/ENCFF331DUV/@@download/ENCFF331DUV.bigWig hg19 released missing genetic modification characterization, low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF843JFL bed narrowPeak conservative idr thresholded peaks ENCSR263DFP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-PBX2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF001TDO, ENCFF075DYV, ENCFF475TJT, ENCFF869BQK 576225 ENCODE Processing Pipeline 3c1385c9f42cd85df9747babe13ee964 https://www.encodeproject.org/files/ENCFF843JFL/@@download/ENCFF843JFL.bed.gz hg19 released missing genetic modification characterization, low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF878SUV bigWig signal p-value ENCSR263DFP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-PBX2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF373IJK, ENCFF419SJQ, ENCFF810SIO 1363045288 ENCODE Processing Pipeline dda05511120469749f22dcd2ff23003a https://www.encodeproject.org/files/ENCFF878SUV/@@download/ENCFF878SUV.bigWig hg19 released missing genetic modification characterization, low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF170SAP bigWig fold change over control ENCSR263DFP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-PBX2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1 ENCFF419SJQ, ENCFF810SIO 1008839745 ENCODE Processing Pipeline efe3f111799cd6acabffc15873827f4b https://www.encodeproject.org/files/ENCFF170SAP/@@download/ENCFF170SAP.bigWig hg19 released missing genetic modification characterization, low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF212KWL bigWig fold change over control ENCSR263DFP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-PBX2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 2 ENCFF373IJK, ENCFF419SJQ 827791504 ENCODE Processing Pipeline 7f9a0c58d91c8a4e649ae7422581b91d https://www.encodeproject.org/files/ENCFF212KWL/@@download/ENCFF212KWL.bigWig hg19 released missing genetic modification characterization, low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF840IZZ bigWig fold change over control ENCSR263DFP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-PBX2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF373IJK, ENCFF419SJQ, ENCFF810SIO 1368993627 ENCODE Processing Pipeline 0af34d4ead07910ed9e8e3044a6d57b8 https://www.encodeproject.org/files/ENCFF840IZZ/@@download/ENCFF840IZZ.bigWig hg19 released missing genetic modification characterization, low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF553ZZC bigBed narrowPeak peaks ENCSR263DFP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-PBX2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1 ENCFF869BQK 13537434 ENCODE Processing Pipeline 28dcefd8f0d6fd0c3dc7335345a29622 https://www.encodeproject.org/files/ENCFF553ZZC/@@download/ENCFF553ZZC.bigBed hg19 released missing genetic modification characterization, low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF626QSD bigBed narrowPeak peaks ENCSR263DFP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-PBX2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 2 ENCFF075DYV 13411909 ENCODE Processing Pipeline 90d156f23042e6399390c630ba7d489d https://www.encodeproject.org/files/ENCFF626QSD/@@download/ENCFF626QSD.bigBed hg19 released missing genetic modification characterization, low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF075DYV bed narrowPeak peaks ENCSR263DFP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-PBX2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 2 ENCFF373IJK, ENCFF419SJQ 6482988 ENCODE Processing Pipeline b4263f8188f33604a937ef0883eb06a8 https://www.encodeproject.org/files/ENCFF075DYV/@@download/ENCFF075DYV.bed.gz hg19 released missing genetic modification characterization, low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF475TJT bed narrowPeak peaks ENCSR263DFP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-PBX2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF373IJK, ENCFF419SJQ, ENCFF810SIO 7099157 ENCODE Processing Pipeline 2fca638f5fd9daa6551ef2d4d8c8309d https://www.encodeproject.org/files/ENCFF475TJT/@@download/ENCFF475TJT.bed.gz hg19 released missing genetic modification characterization, low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF439RUT bigBed narrowPeak peaks ENCSR263DFP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-PBX2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF475TJT 13419240 ENCODE Processing Pipeline fe551100076999de3fbef2a2a38c164d https://www.encodeproject.org/files/ENCFF439RUT/@@download/ENCFF439RUT.bigBed hg19 released missing genetic modification characterization, low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF869BQK bed narrowPeak peaks ENCSR263DFP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-PBX2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1 ENCFF419SJQ, ENCFF810SIO 6589214 ENCODE Processing Pipeline b384399b73a3f804a294944539e1d43e https://www.encodeproject.org/files/ENCFF869BQK/@@download/ENCFF869BQK.bed.gz hg19 released missing genetic modification characterization, low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF989SAT bigBed narrowPeak conservative idr thresholded peaks ENCSR263DFP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-PBX2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF843JFL 1198059 ENCODE Processing Pipeline cc04941c594ceb184137dfb3c3af135b https://www.encodeproject.org/files/ENCFF989SAT/@@download/ENCFF989SAT.bigBed hg19 released missing genetic modification characterization, low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF168HAG bed narrowPeak optimal idr thresholded peaks ENCSR263DFP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-PBX2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF001TDO, ENCFF075DYV, ENCFF475TJT, ENCFF869BQK 640919 ENCODE Processing Pipeline 2b8f415d6a0349fdfc57e3b592874f6a https://www.encodeproject.org/files/ENCFF168HAG/@@download/ENCFF168HAG.bed.gz hg19 released missing genetic modification characterization, low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF961IPT bigBed narrowPeak optimal idr thresholded peaks ENCSR263DFP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-PBX2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF168HAG 1296489 ENCODE Processing Pipeline e49d88e9e883a56f6814ec3ea8e64c29 https://www.encodeproject.org/files/ENCFF961IPT/@@download/ENCFF961IPT.bigBed hg19 released missing genetic modification characterization, low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF466NIM bam unfiltered alignments ENCSR263DFP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-PBX2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 2 100 ENCFF176RUD, ENCFF643CGH, ENCFF793URQ 3644567486 ENCODE Processing Pipeline 729f952a0c2969c2d91689587186516e https://www.encodeproject.org/files/ENCFF466NIM/@@download/ENCFF466NIM.bam GRCh38 released missing genetic modification characterization, low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF982QMD bam unfiltered alignments ENCSR263DFP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-PBX2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1 100 ENCFF410UIX, ENCFF643CGH, ENCFF932THV 5032825375 ENCODE Processing Pipeline cbe035805b681791f3f8f161d10ea00d https://www.encodeproject.org/files/ENCFF982QMD/@@download/ENCFF982QMD.bam GRCh38 released missing genetic modification characterization, low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF616QUW bam alignments ENCSR263DFP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-PBX2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1 100 ENCFF410UIX, ENCFF643CGH, ENCFF932THV 3666929390 ENCODE Processing Pipeline 0dfbe4948de8563c7806a9d52642e3e3 https://www.encodeproject.org/files/ENCFF616QUW/@@download/ENCFF616QUW.bam GRCh38 released missing genetic modification characterization, low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF577WGL bam alignments ENCSR263DFP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-PBX2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 2 100 ENCFF176RUD, ENCFF643CGH, ENCFF793URQ 2604331364 ENCODE Processing Pipeline ec8e1056919fc375620223cd90681740 https://www.encodeproject.org/files/ENCFF577WGL/@@download/ENCFF577WGL.bam GRCh38 released missing genetic modification characterization, low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF490PNZ bigWig signal p-value ENCSR263DFP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-PBX2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1 ENCFF177OCL, ENCFF616QUW 889072406 ENCODE Processing Pipeline 078c27f824c5f5bba94e1e2b93234cc2 https://www.encodeproject.org/files/ENCFF490PNZ/@@download/ENCFF490PNZ.bigWig GRCh38 released missing genetic modification characterization, low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF101FVL bigWig signal p-value ENCSR263DFP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-PBX2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 2 ENCFF177OCL, ENCFF577WGL 931947288 ENCODE Processing Pipeline a436cf089ea7454044d318f1d816f543 https://www.encodeproject.org/files/ENCFF101FVL/@@download/ENCFF101FVL.bigWig GRCh38 released missing genetic modification characterization, low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF238GPP bigWig signal p-value ENCSR263DFP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-PBX2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF177OCL, ENCFF577WGL, ENCFF616QUW 1359498493 ENCODE Processing Pipeline 9d9a628b3fd39d69ab36acdfcba2d3e0 https://www.encodeproject.org/files/ENCFF238GPP/@@download/ENCFF238GPP.bigWig GRCh38 released missing genetic modification characterization, low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF307PGT bigWig fold change over control ENCSR263DFP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-PBX2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1 ENCFF177OCL, ENCFF616QUW 980870461 ENCODE Processing Pipeline 0fd12d0d1375649c24846d43db389a5b https://www.encodeproject.org/files/ENCFF307PGT/@@download/ENCFF307PGT.bigWig GRCh38 released missing genetic modification characterization, low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF213HRA bigWig fold change over control ENCSR263DFP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-PBX2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 2 ENCFF177OCL, ENCFF577WGL 830889051 ENCODE Processing Pipeline a6aaefcf07dc663c895938f005e45ec4 https://www.encodeproject.org/files/ENCFF213HRA/@@download/ENCFF213HRA.bigWig GRCh38 released missing genetic modification characterization, low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF932TME bigWig fold change over control ENCSR263DFP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-PBX2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF177OCL, ENCFF577WGL, ENCFF616QUW 1364482324 ENCODE Processing Pipeline f172f21ecd4035dd8ff91e7befef0ba6 https://www.encodeproject.org/files/ENCFF932TME/@@download/ENCFF932TME.bigWig GRCh38 released missing genetic modification characterization, low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF978TMB bed narrowPeak peaks ENCSR263DFP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-PBX2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 2 ENCFF177OCL, ENCFF577WGL 6361758 ENCODE Processing Pipeline 3e4f363a892bf0ba963f415a69f72397 https://www.encodeproject.org/files/ENCFF978TMB/@@download/ENCFF978TMB.bed.gz GRCh38 released missing genetic modification characterization, low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF351RUD bigBed narrowPeak peaks ENCSR263DFP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-PBX2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF679MAR 13477385 ENCODE Processing Pipeline 35cba8ef6483e67c8c2660e5e528f2b1 https://www.encodeproject.org/files/ENCFF351RUD/@@download/ENCFF351RUD.bigBed GRCh38 released missing genetic modification characterization, low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF247CKB bed narrowPeak peaks ENCSR263DFP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-PBX2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1 ENCFF177OCL, ENCFF616QUW 6502036 ENCODE Processing Pipeline 937f4d893f11be5f494452f393bf1db9 https://www.encodeproject.org/files/ENCFF247CKB/@@download/ENCFF247CKB.bed.gz GRCh38 released missing genetic modification characterization, low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF679MAR bed narrowPeak peaks ENCSR263DFP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-PBX2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF177OCL, ENCFF577WGL, ENCFF616QUW 7094989 ENCODE Processing Pipeline 9f2040f6084a9d186e469753a46173ff https://www.encodeproject.org/files/ENCFF679MAR/@@download/ENCFF679MAR.bed.gz GRCh38 released missing genetic modification characterization, low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF729MOW bigBed narrowPeak peaks ENCSR263DFP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-PBX2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1 ENCFF247CKB 13578474 ENCODE Processing Pipeline 73130c250312f6907a973dc4ffcd96f4 https://www.encodeproject.org/files/ENCFF729MOW/@@download/ENCFF729MOW.bigBed GRCh38 released missing genetic modification characterization, low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF687HWS bigBed narrowPeak peaks ENCSR263DFP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-PBX2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 2 ENCFF978TMB 13392693 ENCODE Processing Pipeline a92c4fd0a2fd8468cda0f3e854d80abe https://www.encodeproject.org/files/ENCFF687HWS/@@download/ENCFF687HWS.bigBed GRCh38 released missing genetic modification characterization, low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF608GNP bed narrowPeak conservative idr thresholded peaks ENCSR263DFP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-PBX2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF247CKB, ENCFF419RSJ, ENCFF679MAR, ENCFF978TMB 592909 ENCODE Processing Pipeline 19345ce586e6271022ecbe50e0bd5d1d https://www.encodeproject.org/files/ENCFF608GNP/@@download/ENCFF608GNP.bed.gz GRCh38 released missing genetic modification characterization, low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF024CIQ bigBed narrowPeak conservative idr thresholded peaks ENCSR263DFP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-PBX2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF608GNP 1221397 ENCODE Processing Pipeline 0cb85d34813f487362f70a7654f1a629 https://www.encodeproject.org/files/ENCFF024CIQ/@@download/ENCFF024CIQ.bigBed GRCh38 released missing genetic modification characterization, low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF685CMQ bed narrowPeak optimal idr thresholded peaks ENCSR263DFP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-PBX2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF247CKB, ENCFF419RSJ, ENCFF679MAR, ENCFF978TMB 654021 ENCODE Processing Pipeline 2378aad048bf2262655ce86dae031382 https://www.encodeproject.org/files/ENCFF685CMQ/@@download/ENCFF685CMQ.bed.gz GRCh38 released missing genetic modification characterization, low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF455LIQ bigBed narrowPeak optimal idr thresholded peaks ENCSR263DFP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-PBX2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF685CMQ 1316015 ENCODE Processing Pipeline 17d619f3f8d7bde5ed1eb96bf425ad5f https://www.encodeproject.org/files/ENCFF455LIQ/@@download/ENCFF455LIQ.bigBed GRCh38 released missing genetic modification characterization, low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF516HQW bam unfiltered alignments ENCSR552YGL ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NFE2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 2 100 ENCFF105YSI, ENCFF719JFL, ENCFF807MUK 3151575526 ENCODE Processing Pipeline f3a4bd359e18b364b268253c980c64c8 https://www.encodeproject.org/files/ENCFF516HQW/@@download/ENCFF516HQW.bam hg19 released missing genetic modification characterization, low read depth ENCFF883IPY bam unfiltered alignments ENCSR552YGL ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NFE2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1 100 ENCFF034LKJ, ENCFF118PSY, ENCFF807MUK 4415275465 ENCODE Processing Pipeline 2012c43755f796d5ca309d113f4dedbc https://www.encodeproject.org/files/ENCFF883IPY/@@download/ENCFF883IPY.bam hg19 released missing genetic modification characterization, low read depth ENCFF719JFL fastq reads ENCSR552YGL ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NFE2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 2 1 100 paired-ended 1 ENCFF105YSI 1437227316 Michael Snyder, Stanford 040b3a827b0d94d8436a4d099c6f572c SRA:SRR5111757 https://www.encodeproject.org/files/ENCFF719JFL/@@download/ENCFF719JFL.fastq.gz Illumina HiSeq 2000 /files/ENCFF160VFX/, /files/ENCFF439KJM/ released missing genetic modification characterization, low read depth ENCFF118PSY fastq reads ENCSR552YGL ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NFE2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1 1 100 paired-ended 1 ENCFF034LKJ 2053556829 Michael Snyder, Stanford 31a5a85c072b43a16d094786f8311eb9 SRA:SRR5111756 https://www.encodeproject.org/files/ENCFF118PSY/@@download/ENCFF118PSY.fastq.gz Illumina HiSeq 2000 /files/ENCFF160VFX/, /files/ENCFF439KJM/ released missing genetic modification characterization, low read depth ENCFF034LKJ fastq reads ENCSR552YGL ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NFE2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1 1 100 paired-ended 2 ENCFF118PSY 2059283075 Michael Snyder, Stanford b45e2bfb9f7106e41da02db17f224fab SRA:SRR5111756 https://www.encodeproject.org/files/ENCFF034LKJ/@@download/ENCFF034LKJ.fastq.gz Illumina HiSeq 2000 /files/ENCFF160VFX/, /files/ENCFF439KJM/ released missing genetic modification characterization, low read depth ENCFF105YSI fastq reads ENCSR552YGL ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NFE2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 2 1 100 paired-ended 2 ENCFF719JFL 1437455092 Michael Snyder, Stanford c81a0ab3a66a387cb72ddf884870741d SRA:SRR5111757 https://www.encodeproject.org/files/ENCFF105YSI/@@download/ENCFF105YSI.fastq.gz Illumina HiSeq 2000 /files/ENCFF160VFX/, /files/ENCFF439KJM/ released missing genetic modification characterization, low read depth ENCFF653FYP bam alignments ENCSR552YGL ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NFE2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1 ENCFF034LKJ, ENCFF118PSY, ENCFF807MUK 3624455568 ENCODE Processing Pipeline ac0e263a0d2a33ff4c6fa4e492a205dd https://www.encodeproject.org/files/ENCFF653FYP/@@download/ENCFF653FYP.bam hg19 released missing genetic modification characterization, low read depth ENCFF497VZQ bam alignments ENCSR552YGL ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NFE2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 2 ENCFF105YSI, ENCFF719JFL, ENCFF807MUK 2587343753 ENCODE Processing Pipeline 00ecfa801277a45f0bd49ab3a924a42e https://www.encodeproject.org/files/ENCFF497VZQ/@@download/ENCFF497VZQ.bam hg19 released missing genetic modification characterization, low read depth ENCFF901KGO bigWig signal p-value ENCSR552YGL ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NFE2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1 ENCFF563IAT, ENCFF653FYP 701323786 ENCODE Processing Pipeline ba98cbf4ef027caf6f9807a1720c2a25 https://www.encodeproject.org/files/ENCFF901KGO/@@download/ENCFF901KGO.bigWig hg19 released missing genetic modification characterization, low read depth ENCFF869KOH bigWig fold change over control ENCSR552YGL ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NFE2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1 ENCFF563IAT, ENCFF653FYP 762536876 ENCODE Processing Pipeline bf651dec9c8bfa044c08f1e8528e3dea https://www.encodeproject.org/files/ENCFF869KOH/@@download/ENCFF869KOH.bigWig hg19 released missing genetic modification characterization, low read depth ENCFF194FEG bigWig fold change over control ENCSR552YGL ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NFE2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 2 ENCFF497VZQ, ENCFF563IAT 604580230 ENCODE Processing Pipeline f2876b6637fb4a3c06eeb7e2cc719641 https://www.encodeproject.org/files/ENCFF194FEG/@@download/ENCFF194FEG.bigWig hg19 released missing genetic modification characterization, low read depth ENCFF688MMW bed narrowPeak peaks ENCSR552YGL ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NFE2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 2 ENCFF497VZQ, ENCFF563IAT 5858657 ENCODE Processing Pipeline b9c42852aa5db77e1422ac3c1df2bbec https://www.encodeproject.org/files/ENCFF688MMW/@@download/ENCFF688MMW.bed.gz hg19 released missing genetic modification characterization, low read depth ENCFF619AGT bed narrowPeak peaks ENCSR552YGL ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NFE2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF497VZQ, ENCFF563IAT, ENCFF653FYP 6927837 ENCODE Processing Pipeline 8bf620519d530be30c82f578f33efa34 https://www.encodeproject.org/files/ENCFF619AGT/@@download/ENCFF619AGT.bed.gz hg19 released missing genetic modification characterization, low read depth ENCFF670JFE bigWig fold change over control ENCSR552YGL ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NFE2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF497VZQ, ENCFF563IAT, ENCFF653FYP 1087020373 ENCODE Processing Pipeline dc74a101fafce5fd209b8ed33bebae7e https://www.encodeproject.org/files/ENCFF670JFE/@@download/ENCFF670JFE.bigWig hg19 released missing genetic modification characterization, low read depth ENCFF359JDW bigBed narrowPeak peaks ENCSR552YGL ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NFE2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF619AGT 13774359 ENCODE Processing Pipeline 0040c7a5174b7e635e03d3ce0612e80a https://www.encodeproject.org/files/ENCFF359JDW/@@download/ENCFF359JDW.bigBed hg19 released missing genetic modification characterization, low read depth ENCFF232DTM bigWig signal p-value ENCSR552YGL ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NFE2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF497VZQ, ENCFF563IAT, ENCFF653FYP 837930765 ENCODE Processing Pipeline 94cc748aeecefdf9e90f182a6a83cdf4 https://www.encodeproject.org/files/ENCFF232DTM/@@download/ENCFF232DTM.bigWig hg19 released missing genetic modification characterization, low read depth ENCFF140CQS bed narrowPeak peaks ENCSR552YGL ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NFE2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1 ENCFF563IAT, ENCFF653FYP 6409945 ENCODE Processing Pipeline 371379ba667695673065ea92fcceb6d7 https://www.encodeproject.org/files/ENCFF140CQS/@@download/ENCFF140CQS.bed.gz hg19 released missing genetic modification characterization, low read depth ENCFF759YKT bed narrowPeak conservative idr thresholded peaks ENCSR552YGL ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NFE2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF001TDO, ENCFF140CQS, ENCFF619AGT, ENCFF688MMW 688659 ENCODE Processing Pipeline f3e4c6b726db91d636dee4edc466ca59 https://www.encodeproject.org/files/ENCFF759YKT/@@download/ENCFF759YKT.bed.gz hg19 released missing genetic modification characterization, low read depth ENCFF310JHO bigWig signal p-value ENCSR552YGL ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NFE2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 2 ENCFF497VZQ, ENCFF563IAT 683048777 ENCODE Processing Pipeline 13898866afbb3e7472880a01fabb20cc https://www.encodeproject.org/files/ENCFF310JHO/@@download/ENCFF310JHO.bigWig hg19 released missing genetic modification characterization, low read depth ENCFF666GYG bigBed narrowPeak peaks ENCSR552YGL ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NFE2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1 ENCFF140CQS 13763880 ENCODE Processing Pipeline 05126a5e32dfe5b638ae07b97aecf43f https://www.encodeproject.org/files/ENCFF666GYG/@@download/ENCFF666GYG.bigBed hg19 released missing genetic modification characterization, low read depth ENCFF586ZMX bigBed narrowPeak peaks ENCSR552YGL ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NFE2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 2 ENCFF688MMW 11464330 ENCODE Processing Pipeline fe56ac5dbdb02744cf3c0b2c36122706 https://www.encodeproject.org/files/ENCFF586ZMX/@@download/ENCFF586ZMX.bigBed hg19 released missing genetic modification characterization, low read depth ENCFF654RJP bigBed narrowPeak conservative idr thresholded peaks ENCSR552YGL ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NFE2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF759YKT 1181168 ENCODE Processing Pipeline 2652607b5b9dbce1e22eb218ba9c74ae https://www.encodeproject.org/files/ENCFF654RJP/@@download/ENCFF654RJP.bigBed hg19 released missing genetic modification characterization, low read depth ENCFF548MHJ bigBed narrowPeak optimal idr thresholded peaks ENCSR552YGL ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NFE2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF911VSD 1315417 ENCODE Processing Pipeline 2d4a4cb6f7092b97e6c6c6af8a50f686 https://www.encodeproject.org/files/ENCFF548MHJ/@@download/ENCFF548MHJ.bigBed hg19 released missing genetic modification characterization, low read depth ENCFF911VSD bed narrowPeak optimal idr thresholded peaks ENCSR552YGL ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NFE2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF001TDO, ENCFF140CQS, ENCFF619AGT, ENCFF688MMW 793523 ENCODE Processing Pipeline d730a03d8ebbaaa61fa7df7a259778da https://www.encodeproject.org/files/ENCFF911VSD/@@download/ENCFF911VSD.bed.gz hg19 released missing genetic modification characterization, low read depth ENCFF651SRT bam unfiltered alignments ENCSR552YGL ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NFE2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 2 100 ENCFF105YSI, ENCFF643CGH, ENCFF719JFL 3156159722 ENCODE Processing Pipeline 6752642eb26c6d81c2eb303c6e3de483 https://www.encodeproject.org/files/ENCFF651SRT/@@download/ENCFF651SRT.bam GRCh38 released missing genetic modification characterization, low read depth ENCFF722CKU bam unfiltered alignments ENCSR552YGL ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NFE2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1 100 ENCFF034LKJ, ENCFF118PSY, ENCFF643CGH 4421147979 ENCODE Processing Pipeline 131d3367cb175f9baf50e76efe7ae7a9 https://www.encodeproject.org/files/ENCFF722CKU/@@download/ENCFF722CKU.bam GRCh38 released missing genetic modification characterization, low read depth ENCFF945TUI bam alignments ENCSR552YGL ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NFE2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 2 100 ENCFF105YSI, ENCFF643CGH, ENCFF719JFL 2587784021 ENCODE Processing Pipeline 06877fe217c320e22b3f96905f27045c https://www.encodeproject.org/files/ENCFF945TUI/@@download/ENCFF945TUI.bam GRCh38 released missing genetic modification characterization, low read depth ENCFF581SOT bam alignments ENCSR552YGL ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NFE2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1 100 ENCFF034LKJ, ENCFF118PSY, ENCFF643CGH 3624746817 ENCODE Processing Pipeline c709171119cfae5cc18b07a31afa3c44 https://www.encodeproject.org/files/ENCFF581SOT/@@download/ENCFF581SOT.bam GRCh38 released missing genetic modification characterization, low read depth ENCFF041PER bigWig signal p-value ENCSR552YGL ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NFE2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1 ENCFF581SOT, ENCFF886VAQ 817143786 ENCODE Processing Pipeline 92721471b9d89dbb93999e1ca5273a21 https://www.encodeproject.org/files/ENCFF041PER/@@download/ENCFF041PER.bigWig GRCh38 released missing genetic modification characterization, low read depth ENCFF013SAY bigWig signal p-value ENCSR552YGL ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NFE2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 2 ENCFF886VAQ, ENCFF945TUI 700915675 ENCODE Processing Pipeline 7a64455059485aa2e8f197066fa943e4 https://www.encodeproject.org/files/ENCFF013SAY/@@download/ENCFF013SAY.bigWig GRCh38 released missing genetic modification characterization, low read depth ENCFF972RCR bigWig signal p-value ENCSR552YGL ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NFE2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF581SOT, ENCFF886VAQ, ENCFF945TUI 857473004 ENCODE Processing Pipeline dd30b4685050b31497ef4442c30c9fa5 https://www.encodeproject.org/files/ENCFF972RCR/@@download/ENCFF972RCR.bigWig GRCh38 released missing genetic modification characterization, low read depth ENCFF732LNZ bigWig fold change over control ENCSR552YGL ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NFE2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1 ENCFF581SOT, ENCFF886VAQ 758984509 ENCODE Processing Pipeline 89174da65a7f20dd04bd05299d1eb8fb https://www.encodeproject.org/files/ENCFF732LNZ/@@download/ENCFF732LNZ.bigWig GRCh38 released missing genetic modification characterization, low read depth ENCFF917NWF bigWig fold change over control ENCSR552YGL ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NFE2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 2 ENCFF886VAQ, ENCFF945TUI 616032705 ENCODE Processing Pipeline c363ed04707f9f9b5f631c60893ebf72 https://www.encodeproject.org/files/ENCFF917NWF/@@download/ENCFF917NWF.bigWig GRCh38 released missing genetic modification characterization, low read depth ENCFF704MKQ bigWig fold change over control ENCSR552YGL ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NFE2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF581SOT, ENCFF886VAQ, ENCFF945TUI 1109699560 ENCODE Processing Pipeline 38ea906ceb5c66fdbdb6761fe1fe60f7 https://www.encodeproject.org/files/ENCFF704MKQ/@@download/ENCFF704MKQ.bigWig GRCh38 released missing genetic modification characterization, low read depth ENCFF795DQU bed narrowPeak peaks ENCSR552YGL ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NFE2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 2 ENCFF886VAQ, ENCFF945TUI 5618788 ENCODE Processing Pipeline f8a00f68846e786b04d11419a9a91bbf https://www.encodeproject.org/files/ENCFF795DQU/@@download/ENCFF795DQU.bed.gz GRCh38 released missing genetic modification characterization, low read depth ENCFF376WDG bigBed narrowPeak peaks ENCSR552YGL ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NFE2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 2 ENCFF795DQU 11360140 ENCODE Processing Pipeline 96147c50a7a34ec1d59f93cee094b802 https://www.encodeproject.org/files/ENCFF376WDG/@@download/ENCFF376WDG.bigBed GRCh38 released missing genetic modification characterization, low read depth ENCFF692VLU bed narrowPeak peaks ENCSR552YGL ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NFE2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1 ENCFF581SOT, ENCFF886VAQ 6299551 ENCODE Processing Pipeline 3bf1dd5b553fc4d9c52039b664557cb8 https://www.encodeproject.org/files/ENCFF692VLU/@@download/ENCFF692VLU.bed.gz GRCh38 released missing genetic modification characterization, low read depth ENCFF290DPG bed narrowPeak peaks ENCSR552YGL ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NFE2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF581SOT, ENCFF886VAQ, ENCFF945TUI 6828034 ENCODE Processing Pipeline 13461c10a9df7863d2d0e0148a4c8583 https://www.encodeproject.org/files/ENCFF290DPG/@@download/ENCFF290DPG.bed.gz GRCh38 released missing genetic modification characterization, low read depth ENCFF709VKQ bigBed narrowPeak peaks ENCSR552YGL ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NFE2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1 ENCFF692VLU 13793195 ENCODE Processing Pipeline aad61292aa702d7261d380a7115361c7 https://www.encodeproject.org/files/ENCFF709VKQ/@@download/ENCFF709VKQ.bigBed GRCh38 released missing genetic modification characterization, low read depth ENCFF847LGT bigBed narrowPeak peaks ENCSR552YGL ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NFE2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF290DPG 13784653 ENCODE Processing Pipeline 4982a8d567f23697eb39c07828c36460 https://www.encodeproject.org/files/ENCFF847LGT/@@download/ENCFF847LGT.bigBed GRCh38 released missing genetic modification characterization, low read depth ENCFF561QTG bigBed narrowPeak conservative idr thresholded peaks ENCSR552YGL ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NFE2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF769VDQ 1185848 ENCODE Processing Pipeline dd258019c24e74682b9af2802eef68ee https://www.encodeproject.org/files/ENCFF561QTG/@@download/ENCFF561QTG.bigBed GRCh38 released missing genetic modification characterization, low read depth ENCFF286HTI bed narrowPeak optimal idr thresholded peaks ENCSR552YGL ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NFE2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF290DPG, ENCFF419RSJ, ENCFF692VLU, ENCFF795DQU 790918 ENCODE Processing Pipeline cea53b76d4303d99def897be661dcfcf https://www.encodeproject.org/files/ENCFF286HTI/@@download/ENCFF286HTI.bed.gz GRCh38 released missing genetic modification characterization, low read depth ENCFF543CRT bigBed narrowPeak optimal idr thresholded peaks ENCSR552YGL ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NFE2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF286HTI 1318202 ENCODE Processing Pipeline 46371403e7968071cd06406b6ca40343 https://www.encodeproject.org/files/ENCFF543CRT/@@download/ENCFF543CRT.bigBed GRCh38 released missing genetic modification characterization, low read depth ENCFF769VDQ bed narrowPeak conservative idr thresholded peaks ENCSR552YGL ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NFE2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF290DPG, ENCFF419RSJ, ENCFF692VLU, ENCFF795DQU 688712 ENCODE Processing Pipeline a6f9817e90d1623c30dc4edc38850979 https://www.encodeproject.org/files/ENCFF769VDQ/@@download/ENCFF769VDQ.bed.gz GRCh38 released missing genetic modification characterization, low read depth ENCFF171KWD fastq reads ENCSR899GSH ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM34-human ENCAB594ZFC DNA SDS formaldehyde False 2018-01-19 ENCODE 1 1 40 single-ended 339248600 Xiang-Dong Fu, UCSD 5352a8dc06105f02d01c0d62900cde4b https://www.encodeproject.org/files/ENCFF171KWD/@@download/ENCFF171KWD.fastq.gz Illumina HiSeq 2000 /files/ENCFF577LLL/ released borderline replicate concordance, low read length experiment not submitted to GEO insufficient read depth ENCFF948AGS fastq reads ENCSR899GSH ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM34-human ENCAB594ZFC DNA SDS formaldehyde False 2018-01-19 ENCODE 2 1 40 single-ended 347370344 Xiang-Dong Fu, UCSD e76c3f2e70febdf11f50fd3b84c94158 https://www.encodeproject.org/files/ENCFF948AGS/@@download/ENCFF948AGS.fastq.gz Illumina HiSeq 2000 /files/ENCFF363JFD/ released borderline replicate concordance, low read length experiment not submitted to GEO insufficient read depth ENCFF187TCP bam alignments ENCSR899GSH ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM34-human ENCAB594ZFC DNA SDS formaldehyde False 2018-01-19 ENCODE 1 ENCFF171KWD, ENCFF807MUK 352193046 ENCODE Processing Pipeline b80913bbd07c618730fc9c19e8d9c8c7 https://www.encodeproject.org/files/ENCFF187TCP/@@download/ENCFF187TCP.bam hg19 released borderline replicate concordance, low read length experiment not submitted to GEO insufficient read depth ENCFF488SVK bam alignments ENCSR899GSH ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM34-human ENCAB594ZFC DNA SDS formaldehyde False 2018-01-19 ENCODE 2 ENCFF807MUK, ENCFF948AGS 355224858 ENCODE Processing Pipeline e0e0d1a9ddeffa58cd501eb855e4dd21 https://www.encodeproject.org/files/ENCFF488SVK/@@download/ENCFF488SVK.bam hg19 released borderline replicate concordance, low read length experiment not submitted to GEO insufficient read depth ENCFF470GSP bam unfiltered alignments ENCSR899GSH ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM34-human ENCAB594ZFC DNA SDS formaldehyde False 2018-01-19 ENCODE 1 ENCFF171KWD, ENCFF643CGH 491017769 ENCODE Processing Pipeline f5d367d3d65eca076d5f9fe723cc66f0 https://www.encodeproject.org/files/ENCFF470GSP/@@download/ENCFF470GSP.bam GRCh38 released borderline replicate concordance, low read length experiment not submitted to GEO insufficient read depth ENCFF953ICQ bam alignments ENCSR899GSH ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM34-human ENCAB594ZFC DNA SDS formaldehyde False 2018-01-19 ENCODE 2 ENCFF643CGH, ENCFF948AGS 354759261 ENCODE Processing Pipeline 199a4137880e37eeb672500a3d57a82b https://www.encodeproject.org/files/ENCFF953ICQ/@@download/ENCFF953ICQ.bam GRCh38 released borderline replicate concordance, low read length experiment not submitted to GEO insufficient read depth ENCFF560BTA bam unfiltered alignments ENCSR899GSH ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM34-human ENCAB594ZFC DNA SDS formaldehyde False 2018-01-19 ENCODE 2 ENCFF643CGH, ENCFF948AGS 500415888 ENCODE Processing Pipeline 77f47869e3f7314eb2943127c2bff2a9 https://www.encodeproject.org/files/ENCFF560BTA/@@download/ENCFF560BTA.bam GRCh38 released borderline replicate concordance, low read length experiment not submitted to GEO insufficient read depth ENCFF153MPX bam alignments ENCSR899GSH ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM34-human ENCAB594ZFC DNA SDS formaldehyde False 2018-01-19 ENCODE 1 ENCFF171KWD, ENCFF643CGH 351723148 ENCODE Processing Pipeline 9e039ecd58d9b5c171981713887e5895 https://www.encodeproject.org/files/ENCFF153MPX/@@download/ENCFF153MPX.bam GRCh38 released borderline replicate concordance, low read length experiment not submitted to GEO insufficient read depth ENCFF225MPH bigWig fold change over control ENCSR899GSH ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM34-human ENCAB594ZFC DNA SDS formaldehyde False 2018-01-19 ENCODE 1, 2 ENCFF120YSP, ENCFF153MPX, ENCFF906SAI, ENCFF953ICQ 732681095 ENCODE Processing Pipeline 59f4cebfcea685d7d6d1868cb792bf80 https://www.encodeproject.org/files/ENCFF225MPH/@@download/ENCFF225MPH.bigWig GRCh38 released borderline replicate concordance, low read length experiment not submitted to GEO insufficient read depth ENCFF353ZHX bigWig signal p-value ENCSR899GSH ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM34-human ENCAB594ZFC DNA SDS formaldehyde False 2018-01-19 ENCODE 1 ENCFF120YSP, ENCFF153MPX 586399738 ENCODE Processing Pipeline 726ade9f7df89f7a8abf7bce5225c57f https://www.encodeproject.org/files/ENCFF353ZHX/@@download/ENCFF353ZHX.bigWig GRCh38 released borderline replicate concordance, low read length experiment not submitted to GEO insufficient read depth ENCFF733CAH bigWig signal p-value ENCSR899GSH ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM34-human ENCAB594ZFC DNA SDS formaldehyde False 2018-01-19 ENCODE 1, 2 ENCFF120YSP, ENCFF153MPX, ENCFF906SAI, ENCFF953ICQ 1142347257 ENCODE Processing Pipeline 23b5c425c6a90fe811b920fbf20647fa https://www.encodeproject.org/files/ENCFF733CAH/@@download/ENCFF733CAH.bigWig GRCh38 released borderline replicate concordance, low read length experiment not submitted to GEO insufficient read depth ENCFF519EJI bigWig fold change over control ENCSR899GSH ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM34-human ENCAB594ZFC DNA SDS formaldehyde False 2018-01-19 ENCODE 1 ENCFF120YSP, ENCFF153MPX 302728165 ENCODE Processing Pipeline 59d40927541da978caef51b30d560608 https://www.encodeproject.org/files/ENCFF519EJI/@@download/ENCFF519EJI.bigWig GRCh38 released borderline replicate concordance, low read length experiment not submitted to GEO insufficient read depth ENCFF601PCW bed narrowPeak peaks ENCSR899GSH ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM34-human ENCAB594ZFC DNA SDS formaldehyde False 2018-01-19 ENCODE 1, 2 ENCFF120YSP, ENCFF153MPX, ENCFF906SAI, ENCFF953ICQ 6084575 ENCODE Processing Pipeline 04d9ef79040823fbb5f2beba6bd16722 https://www.encodeproject.org/files/ENCFF601PCW/@@download/ENCFF601PCW.bed.gz GRCh38 released borderline replicate concordance, low read length experiment not submitted to GEO insufficient read depth ENCFF603DPZ bigWig signal p-value ENCSR899GSH ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM34-human ENCAB594ZFC DNA SDS formaldehyde False 2018-01-19 ENCODE 2 ENCFF906SAI, ENCFF953ICQ 634562849 ENCODE Processing Pipeline a237f27b194b8c05f9bc35d0349d8f25 https://www.encodeproject.org/files/ENCFF603DPZ/@@download/ENCFF603DPZ.bigWig GRCh38 released borderline replicate concordance, low read length experiment not submitted to GEO insufficient read depth ENCFF254PVV bed narrowPeak peaks ENCSR899GSH ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM34-human ENCAB594ZFC DNA SDS formaldehyde False 2018-01-19 ENCODE 1 ENCFF120YSP, ENCFF153MPX 4382625 ENCODE Processing Pipeline c1df4d5f022a690c1e920aa230ac3682 https://www.encodeproject.org/files/ENCFF254PVV/@@download/ENCFF254PVV.bed.gz GRCh38 released borderline replicate concordance, low read length experiment not submitted to GEO insufficient read depth ENCFF415XXD bed narrowPeak peaks ENCSR899GSH ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM34-human ENCAB594ZFC DNA SDS formaldehyde False 2018-01-19 ENCODE 2 ENCFF906SAI, ENCFF953ICQ 4491084 ENCODE Processing Pipeline a6640667ee3fd324277422767656127b https://www.encodeproject.org/files/ENCFF415XXD/@@download/ENCFF415XXD.bed.gz GRCh38 released borderline replicate concordance, low read length experiment not submitted to GEO insufficient read depth ENCFF142HGO bed narrowPeak conservative idr thresholded peaks ENCSR899GSH ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM34-human ENCAB594ZFC DNA SDS formaldehyde False 2018-01-19 ENCODE 1, 2 ENCFF254PVV, ENCFF415XXD, ENCFF419RSJ, ENCFF601PCW 18289 ENCODE Processing Pipeline fe8285f561538739e8f472439f9fb26f https://www.encodeproject.org/files/ENCFF142HGO/@@download/ENCFF142HGO.bed.gz GRCh38 released borderline replicate concordance, low read length experiment not submitted to GEO insufficient read depth ENCFF971NYD bigBed narrowPeak peaks ENCSR899GSH ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM34-human ENCAB594ZFC DNA SDS formaldehyde False 2018-01-19 ENCODE 1 ENCFF254PVV 9916633 ENCODE Processing Pipeline 079c9a23b120d6bd1174a961719a57d3 https://www.encodeproject.org/files/ENCFF971NYD/@@download/ENCFF971NYD.bigBed GRCh38 released borderline replicate concordance, low read length experiment not submitted to GEO insufficient read depth ENCFF177AXT bigBed narrowPeak peaks ENCSR899GSH ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM34-human ENCAB594ZFC DNA SDS formaldehyde False 2018-01-19 ENCODE 2 ENCFF415XXD 10035084 ENCODE Processing Pipeline 66dfa747687fb2abb458b96629617df7 https://www.encodeproject.org/files/ENCFF177AXT/@@download/ENCFF177AXT.bigBed GRCh38 released borderline replicate concordance, low read length experiment not submitted to GEO insufficient read depth ENCFF670ILH bed narrowPeak optimal idr thresholded peaks ENCSR899GSH ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM34-human ENCAB594ZFC DNA SDS formaldehyde False 2018-01-19 ENCODE 1, 2 ENCFF254PVV, ENCFF415XXD, ENCFF419RSJ, ENCFF601PCW 21075 ENCODE Processing Pipeline dec8a05196abf982d5ce940d7a42067a https://www.encodeproject.org/files/ENCFF670ILH/@@download/ENCFF670ILH.bed.gz GRCh38 released borderline replicate concordance, low read length experiment not submitted to GEO insufficient read depth ENCFF967DYH bigWig fold change over control ENCSR899GSH ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM34-human ENCAB594ZFC DNA SDS formaldehyde False 2018-01-19 ENCODE 2 ENCFF906SAI, ENCFF953ICQ 317542189 ENCODE Processing Pipeline 4abe51c127ac6daecba1e778d067ec12 https://www.encodeproject.org/files/ENCFF967DYH/@@download/ENCFF967DYH.bigWig GRCh38 released borderline replicate concordance, low read length experiment not submitted to GEO insufficient read depth ENCFF451CVE bigBed narrowPeak optimal idr thresholded peaks ENCSR899GSH ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM34-human ENCAB594ZFC DNA SDS formaldehyde False 2018-01-19 ENCODE 1, 2 ENCFF670ILH 87850 ENCODE Processing Pipeline 45b41e50e67f47f63be3bf3bf16e41d1 https://www.encodeproject.org/files/ENCFF451CVE/@@download/ENCFF451CVE.bigBed GRCh38 released borderline replicate concordance, low read length experiment not submitted to GEO insufficient read depth ENCFF090TOO bigBed narrowPeak peaks ENCSR899GSH ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM34-human ENCAB594ZFC DNA SDS formaldehyde False 2018-01-19 ENCODE 1, 2 ENCFF601PCW 13450400 ENCODE Processing Pipeline 8ce5f099cb663776f586e004196fd76d https://www.encodeproject.org/files/ENCFF090TOO/@@download/ENCFF090TOO.bigBed GRCh38 released borderline replicate concordance, low read length experiment not submitted to GEO insufficient read depth ENCFF239TSK bigBed narrowPeak conservative idr thresholded peaks ENCSR899GSH ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM34-human ENCAB594ZFC DNA SDS formaldehyde False 2018-01-19 ENCODE 1, 2 ENCFF142HGO 84000 ENCODE Processing Pipeline f23627dc359d5f1f005f07e978c8b800 https://www.encodeproject.org/files/ENCFF239TSK/@@download/ENCFF239TSK.bigBed GRCh38 released borderline replicate concordance, low read length experiment not submitted to GEO insufficient read depth ENCFF303FDE bigBed narrowPeak peaks ENCSR899GSH ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM34-human ENCAB594ZFC DNA SDS formaldehyde False 2018-01-19 ENCODE 2 ENCFF144QTJ 10467548 ENCODE Processing Pipeline 672a61aedebe5d149718562fe6af6c41 https://www.encodeproject.org/files/ENCFF303FDE/@@download/ENCFF303FDE.bigBed hg19 released borderline replicate concordance, low read length experiment not submitted to GEO insufficient read depth ENCFF983PUB bigBed narrowPeak optimal idr thresholded peaks ENCSR899GSH ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM34-human ENCAB594ZFC DNA SDS formaldehyde False 2018-01-19 ENCODE 1, 2 ENCFF782GWS 87819 ENCODE Processing Pipeline 97497143c6a5ee3a7c4f31fd660b0a03 https://www.encodeproject.org/files/ENCFF983PUB/@@download/ENCFF983PUB.bigBed hg19 released borderline replicate concordance, low read length experiment not submitted to GEO insufficient read depth ENCFF862OAR bigWig fold change over control ENCSR899GSH ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM34-human ENCAB594ZFC DNA SDS formaldehyde False 2018-01-19 ENCODE 2 ENCFF488SVK, ENCFF641CEP 323488196 ENCODE Processing Pipeline f707397bc21ba8237277ffa0e2153d27 https://www.encodeproject.org/files/ENCFF862OAR/@@download/ENCFF862OAR.bigWig hg19 released borderline replicate concordance, low read length experiment not submitted to GEO insufficient read depth ENCFF144QTJ bed narrowPeak peaks ENCSR899GSH ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM34-human ENCAB594ZFC DNA SDS formaldehyde False 2018-01-19 ENCODE 2 ENCFF488SVK, ENCFF641CEP 4860631 ENCODE Processing Pipeline cdbc480c0129042595322c94598b117f https://www.encodeproject.org/files/ENCFF144QTJ/@@download/ENCFF144QTJ.bed.gz hg19 released borderline replicate concordance, low read length experiment not submitted to GEO insufficient read depth ENCFF934BOE bed narrowPeak peaks ENCSR899GSH ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM34-human ENCAB594ZFC DNA SDS formaldehyde False 2018-01-19 ENCODE 1, 2 ENCFF187TCP, ENCFF488SVK, ENCFF493QSH, ENCFF641CEP 6222350 ENCODE Processing Pipeline 8e85385996eace4de7fa9f0596787b83 https://www.encodeproject.org/files/ENCFF934BOE/@@download/ENCFF934BOE.bed.gz hg19 released borderline replicate concordance, low read length experiment not submitted to GEO insufficient read depth ENCFF405DOB bigWig fold change over control ENCSR899GSH ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM34-human ENCAB594ZFC DNA SDS formaldehyde False 2018-01-19 ENCODE 1 ENCFF187TCP, ENCFF493QSH 308647324 ENCODE Processing Pipeline 3f2446e72373a0d2478798ca9358971c https://www.encodeproject.org/files/ENCFF405DOB/@@download/ENCFF405DOB.bigWig hg19 released borderline replicate concordance, low read length experiment not submitted to GEO insufficient read depth ENCFF857BZI bigWig signal p-value ENCSR899GSH ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM34-human ENCAB594ZFC DNA SDS formaldehyde False 2018-01-19 ENCODE 2 ENCFF488SVK, ENCFF641CEP 592553726 ENCODE Processing Pipeline 18cd31c77108cbcca313967c5cdd34d6 https://www.encodeproject.org/files/ENCFF857BZI/@@download/ENCFF857BZI.bigWig hg19 released borderline replicate concordance, low read length experiment not submitted to GEO insufficient read depth ENCFF516BXP bigWig signal p-value ENCSR899GSH ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM34-human ENCAB594ZFC DNA SDS formaldehyde False 2018-01-19 ENCODE 1, 2 ENCFF187TCP, ENCFF488SVK, ENCFF493QSH, ENCFF641CEP 988578390 ENCODE Processing Pipeline e62a2210c81ea150456a04e357b43ec6 https://www.encodeproject.org/files/ENCFF516BXP/@@download/ENCFF516BXP.bigWig hg19 released borderline replicate concordance, low read length experiment not submitted to GEO insufficient read depth ENCFF605NTJ bigBed narrowPeak conservative idr thresholded peaks ENCSR899GSH ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM34-human ENCAB594ZFC DNA SDS formaldehyde False 2018-01-19 ENCODE 1, 2 ENCFF100UTE 83230 ENCODE Processing Pipeline 2cdf34417beb88c6920c8cf86c40bee0 https://www.encodeproject.org/files/ENCFF605NTJ/@@download/ENCFF605NTJ.bigBed hg19 released borderline replicate concordance, low read length experiment not submitted to GEO insufficient read depth ENCFF539QIP bigBed narrowPeak peaks ENCSR899GSH ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM34-human ENCAB594ZFC DNA SDS formaldehyde False 2018-01-19 ENCODE 1, 2 ENCFF934BOE 13435199 ENCODE Processing Pipeline 482f58dac5c0deea878cdb92a75526a7 https://www.encodeproject.org/files/ENCFF539QIP/@@download/ENCFF539QIP.bigBed hg19 released borderline replicate concordance, low read length experiment not submitted to GEO insufficient read depth ENCFF319QUS bigWig fold change over control ENCSR899GSH ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM34-human ENCAB594ZFC DNA SDS formaldehyde False 2018-01-19 ENCODE 1, 2 ENCFF187TCP, ENCFF488SVK, ENCFF493QSH, ENCFF641CEP 782216830 ENCODE Processing Pipeline 489c4d0fa160de3f5e14ea04d1357d9e https://www.encodeproject.org/files/ENCFF319QUS/@@download/ENCFF319QUS.bigWig hg19 released borderline replicate concordance, low read length experiment not submitted to GEO insufficient read depth ENCFF179WPR bigBed narrowPeak peaks ENCSR899GSH ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM34-human ENCAB594ZFC DNA SDS formaldehyde False 2018-01-19 ENCODE 1 ENCFF686LNT 10132197 ENCODE Processing Pipeline 75c9ea315dbc59003bb58d350c50f127 https://www.encodeproject.org/files/ENCFF179WPR/@@download/ENCFF179WPR.bigBed hg19 released borderline replicate concordance, low read length experiment not submitted to GEO insufficient read depth ENCFF100UTE bed narrowPeak conservative idr thresholded peaks ENCSR899GSH ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM34-human ENCAB594ZFC DNA SDS formaldehyde False 2018-01-19 ENCODE 1, 2 ENCFF001TDO, ENCFF144QTJ, ENCFF686LNT, ENCFF934BOE 18530 ENCODE Processing Pipeline a9039f6cca654ed13119e93837d639ec https://www.encodeproject.org/files/ENCFF100UTE/@@download/ENCFF100UTE.bed.gz hg19 released borderline replicate concordance, low read length experiment not submitted to GEO insufficient read depth ENCFF782GWS bed narrowPeak optimal idr thresholded peaks ENCSR899GSH ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM34-human ENCAB594ZFC DNA SDS formaldehyde False 2018-01-19 ENCODE 1, 2 ENCFF001TDO, ENCFF144QTJ, ENCFF686LNT, ENCFF934BOE 21299 ENCODE Processing Pipeline af80c3dcb4598e6120e3793fd0d10b3c https://www.encodeproject.org/files/ENCFF782GWS/@@download/ENCFF782GWS.bed.gz hg19 released borderline replicate concordance, low read length experiment not submitted to GEO insufficient read depth ENCFF632OCB bigWig signal p-value ENCSR899GSH ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM34-human ENCAB594ZFC DNA SDS formaldehyde False 2018-01-19 ENCODE 1 ENCFF187TCP, ENCFF493QSH 515495320 ENCODE Processing Pipeline e97c223c0710e92495315f0f35d12275 https://www.encodeproject.org/files/ENCFF632OCB/@@download/ENCFF632OCB.bigWig hg19 released borderline replicate concordance, low read length experiment not submitted to GEO insufficient read depth ENCFF686LNT bed narrowPeak peaks ENCSR899GSH ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM34-human ENCAB594ZFC DNA SDS formaldehyde False 2018-01-19 ENCODE 1 ENCFF187TCP, ENCFF493QSH 4512649 ENCODE Processing Pipeline fa9e187e5f39fb2784f5a5bc36f31368 https://www.encodeproject.org/files/ENCFF686LNT/@@download/ENCFF686LNT.bed.gz hg19 released borderline replicate concordance, low read length experiment not submitted to GEO insufficient read depth ENCFF527PUP bam unfiltered alignments ENCSR899GSH ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM34-human ENCAB594ZFC DNA SDS formaldehyde False 2018-01-19 ENCODE 2 40 ENCFF807MUK, ENCFF948AGS 498930308 ENCODE Processing Pipeline af534d0f455c2adf30422678df6a8dcd https://www.encodeproject.org/files/ENCFF527PUP/@@download/ENCFF527PUP.bam hg19 released borderline replicate concordance, low read length experiment not submitted to GEO insufficient read depth ENCFF330QLM bam unfiltered alignments ENCSR899GSH ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM34-human ENCAB594ZFC DNA SDS formaldehyde False 2018-01-19 ENCODE 1 40 ENCFF171KWD, ENCFF807MUK 489587545 ENCODE Processing Pipeline 1dffdaa651b30c86835798b4c812e9cd https://www.encodeproject.org/files/ENCFF330QLM/@@download/ENCFF330QLM.bam hg19 released borderline replicate concordance, low read length experiment not submitted to GEO insufficient read depth ENCFF146EKI fastq reads ENCSR742IDN ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2C1-human ENCAB324ARN DNA False 2017-01-27 ENCODE 2 1 100 paired-ended 1 ENCFF102DIC 3249904040 Michael Snyder, Stanford 535849d6890a9650b423374fa97aaee9 SRA:SRR6214180 https://www.encodeproject.org/files/ENCFF146EKI/@@download/ENCFF146EKI.fastq.gz Illumina HiSeq 4000 /files/ENCFF259GQA/ released mild to moderate bottlenecking, antibody characterized with exemption missing control alignments ENCFF025RHU fastq reads ENCSR742IDN ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2C1-human ENCAB324ARN DNA False 2017-01-27 ENCODE 1 1 100 paired-ended 1 ENCFF562VET 1908829095 Michael Snyder, Stanford 1c180dcd00aed6e578b9459e8262ce4e SRA:SRR6214181 https://www.encodeproject.org/files/ENCFF025RHU/@@download/ENCFF025RHU.fastq.gz Illumina HiSeq 4000 /files/ENCFF498JMO/ released mild to moderate bottlenecking, antibody characterized with exemption missing control alignments ENCFF102DIC fastq reads ENCSR742IDN ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2C1-human ENCAB324ARN DNA False 2017-01-27 ENCODE 2 1 100 paired-ended 2 ENCFF146EKI 3524504765 Michael Snyder, Stanford b531501479d0eef4dfef305bcdce0cc5 SRA:SRR6214180 https://www.encodeproject.org/files/ENCFF102DIC/@@download/ENCFF102DIC.fastq.gz Illumina HiSeq 4000 /files/ENCFF837MIV/ released mild to moderate bottlenecking, antibody characterized with exemption missing control alignments ENCFF562VET fastq reads ENCSR742IDN ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2C1-human ENCAB324ARN DNA False 2017-01-27 ENCODE 1 1 100 paired-ended 2 ENCFF025RHU 1946050581 Michael Snyder, Stanford 010721e6e55850cb4bfe58a6fe9b9366 SRA:SRR6214181 https://www.encodeproject.org/files/ENCFF562VET/@@download/ENCFF562VET.fastq.gz Illumina HiSeq 4000 /files/ENCFF502GTS/ released mild to moderate bottlenecking, antibody characterized with exemption missing control alignments ENCFF029WOR bam unfiltered alignments ENCSR742IDN ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2C1-human ENCAB324ARN DNA False 2017-01-27 ENCODE 1 100 ENCFF025RHU, ENCFF562VET, ENCFF643CGH 3915468029 ENCODE Processing Pipeline 2167c779241b4a5209419c79db7522b4 https://www.encodeproject.org/files/ENCFF029WOR/@@download/ENCFF029WOR.bam GRCh38 released mild to moderate bottlenecking, antibody characterized with exemption missing control alignments ENCFF856QWF bam unfiltered alignments ENCSR742IDN ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2C1-human ENCAB324ARN DNA False 2017-01-27 ENCODE 1 100 ENCFF025RHU, ENCFF562VET, ENCFF807MUK 3911053477 ENCODE Processing Pipeline 506aedc8880358dd73062ac9f30b091b https://www.encodeproject.org/files/ENCFF856QWF/@@download/ENCFF856QWF.bam hg19 released mild to moderate bottlenecking, antibody characterized with exemption missing control alignments ENCFF133RCP bam unfiltered alignments ENCSR742IDN ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2C1-human ENCAB324ARN DNA False 2017-01-27 ENCODE 2 100 ENCFF102DIC, ENCFF146EKI, ENCFF807MUK 6467796041 ENCODE Processing Pipeline 5cc0a371d1ff1e4d81becb20de5c4c1b https://www.encodeproject.org/files/ENCFF133RCP/@@download/ENCFF133RCP.bam hg19 released mild to moderate bottlenecking, antibody characterized with exemption missing control alignments ENCFF161YUM bam unfiltered alignments ENCSR742IDN ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2C1-human ENCAB324ARN DNA False 2017-01-27 ENCODE 2 100 ENCFF102DIC, ENCFF146EKI, ENCFF643CGH 6473942679 ENCODE Processing Pipeline e68ea45e2718810c125120371f618382 https://www.encodeproject.org/files/ENCFF161YUM/@@download/ENCFF161YUM.bam GRCh38 released mild to moderate bottlenecking, antibody characterized with exemption missing control alignments ENCFF965SIW bam alignments ENCSR742IDN ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2C1-human ENCAB324ARN DNA False 2017-01-27 ENCODE 1 100 ENCFF025RHU, ENCFF562VET, ENCFF807MUK 3002077249 ENCODE Processing Pipeline 0342a0364865da554fc8e144475cdc21 https://www.encodeproject.org/files/ENCFF965SIW/@@download/ENCFF965SIW.bam hg19 released mild to moderate bottlenecking, antibody characterized with exemption missing control alignments ENCFF149WGG bam alignments ENCSR742IDN ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2C1-human ENCAB324ARN DNA False 2017-01-27 ENCODE 1 100 ENCFF025RHU, ENCFF562VET, ENCFF643CGH 3003618186 ENCODE Processing Pipeline 5fca0478689e3b882811aa2fa76daefe https://www.encodeproject.org/files/ENCFF149WGG/@@download/ENCFF149WGG.bam GRCh38 released mild to moderate bottlenecking, antibody characterized with exemption missing control alignments ENCFF254NNQ bam alignments ENCSR742IDN ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2C1-human ENCAB324ARN DNA False 2017-01-27 ENCODE 2 100 ENCFF102DIC, ENCFF146EKI, ENCFF807MUK 4709764038 ENCODE Processing Pipeline da3da205c505170306315d618b18670b https://www.encodeproject.org/files/ENCFF254NNQ/@@download/ENCFF254NNQ.bam hg19 released mild to moderate bottlenecking, antibody characterized with exemption missing control alignments ENCFF315DCZ bam alignments ENCSR742IDN ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2C1-human ENCAB324ARN DNA False 2017-01-27 ENCODE 2 100 ENCFF102DIC, ENCFF146EKI, ENCFF643CGH 4712714583 ENCODE Processing Pipeline 8c4ba40cc470e3e7de5306acef6522f0 https://www.encodeproject.org/files/ENCFF315DCZ/@@download/ENCFF315DCZ.bam GRCh38 released mild to moderate bottlenecking, antibody characterized with exemption missing control alignments ENCFF847QTX bigWig signal p-value ENCSR742IDN ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2C1-human ENCAB324ARN DNA False 2017-01-27 ENCODE 1 ENCFF160VXC, ENCFF965SIW 1108901588 ENCODE Processing Pipeline f5b5aae56dea2955890ac97289fa3606 https://www.encodeproject.org/files/ENCFF847QTX/@@download/ENCFF847QTX.bigWig hg19 released mild to moderate bottlenecking, antibody characterized with exemption missing control alignments ENCFF517INS bigWig signal p-value ENCSR742IDN ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2C1-human ENCAB324ARN DNA False 2017-01-27 ENCODE 1, 2 ENCFF160VXC, ENCFF254NNQ, ENCFF834TUP, ENCFF965SIW 1824296707 ENCODE Processing Pipeline e2c9ff5cc6fea34b00e0e8b2cb1f76a3 https://www.encodeproject.org/files/ENCFF517INS/@@download/ENCFF517INS.bigWig hg19 released mild to moderate bottlenecking, antibody characterized with exemption missing control alignments ENCFF023VPI bigWig fold change over control ENCSR742IDN ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2C1-human ENCAB324ARN DNA False 2017-01-27 ENCODE 1 ENCFF160VXC, ENCFF965SIW 1088916758 ENCODE Processing Pipeline ecd44571ce783270c981967821f643c6 https://www.encodeproject.org/files/ENCFF023VPI/@@download/ENCFF023VPI.bigWig hg19 released mild to moderate bottlenecking, antibody characterized with exemption missing control alignments ENCFF788ZYS bigWig signal p-value ENCSR742IDN ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2C1-human ENCAB324ARN DNA False 2017-01-27 ENCODE 2 ENCFF254NNQ, ENCFF834TUP 1305621525 ENCODE Processing Pipeline 30fc824d328bbe79e9c59afb3d03495f https://www.encodeproject.org/files/ENCFF788ZYS/@@download/ENCFF788ZYS.bigWig hg19 released mild to moderate bottlenecking, antibody characterized with exemption missing control alignments ENCFF581VQP bigWig fold change over control ENCSR742IDN ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2C1-human ENCAB324ARN DNA False 2017-01-27 ENCODE 2 ENCFF254NNQ, ENCFF834TUP 1523338557 ENCODE Processing Pipeline 712426208cf4ecbebb8c4acb08ba4a28 https://www.encodeproject.org/files/ENCFF581VQP/@@download/ENCFF581VQP.bigWig hg19 released mild to moderate bottlenecking, antibody characterized with exemption missing control alignments ENCFF490IPR bigWig fold change over control ENCSR742IDN ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2C1-human ENCAB324ARN DNA False 2017-01-27 ENCODE 1, 2 ENCFF160VXC, ENCFF254NNQ, ENCFF834TUP, ENCFF965SIW 2240537448 ENCODE Processing Pipeline dd3a518b7df7d2a85db60367b9924aea https://www.encodeproject.org/files/ENCFF490IPR/@@download/ENCFF490IPR.bigWig hg19 released mild to moderate bottlenecking, antibody characterized with exemption missing control alignments ENCFF735EGA bed narrowPeak peaks ENCSR742IDN ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2C1-human ENCAB324ARN DNA False 2017-01-27 ENCODE 1 ENCFF160VXC, ENCFF965SIW 6692518 ENCODE Processing Pipeline 6a302f9366a47443547a372527ca43ee https://www.encodeproject.org/files/ENCFF735EGA/@@download/ENCFF735EGA.bed.gz hg19 released mild to moderate bottlenecking, antibody characterized with exemption missing control alignments ENCFF358FIT bigBed narrowPeak peaks ENCSR742IDN ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2C1-human ENCAB324ARN DNA False 2017-01-27 ENCODE 1, 2 ENCFF406JPU 13066526 ENCODE Processing Pipeline 0ec84a393c666a790ef7676356baded0 https://www.encodeproject.org/files/ENCFF358FIT/@@download/ENCFF358FIT.bigBed hg19 released mild to moderate bottlenecking, antibody characterized with exemption missing control alignments ENCFF497RBU bed narrowPeak peaks ENCSR742IDN ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2C1-human ENCAB324ARN DNA False 2017-01-27 ENCODE 2 ENCFF254NNQ, ENCFF834TUP 7172441 ENCODE Processing Pipeline 85544aad8c0d6fb0f2a0e380f554bd76 https://www.encodeproject.org/files/ENCFF497RBU/@@download/ENCFF497RBU.bed.gz hg19 released mild to moderate bottlenecking, antibody characterized with exemption missing control alignments ENCFF406JPU bed narrowPeak peaks ENCSR742IDN ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2C1-human ENCAB324ARN DNA False 2017-01-27 ENCODE 1, 2 ENCFF160VXC, ENCFF254NNQ, ENCFF834TUP, ENCFF965SIW 7259842 ENCODE Processing Pipeline a4bc031f28c53690a1aadf54849668d3 https://www.encodeproject.org/files/ENCFF406JPU/@@download/ENCFF406JPU.bed.gz hg19 released mild to moderate bottlenecking, antibody characterized with exemption missing control alignments ENCFF297OMH bed narrowPeak conservative idr thresholded peaks ENCSR742IDN ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2C1-human ENCAB324ARN DNA False 2017-01-27 ENCODE 1, 2 ENCFF001TDO, ENCFF406JPU, ENCFF497RBU, ENCFF735EGA 221244 ENCODE Processing Pipeline d4977f294535235cf778989c2dec3822 https://www.encodeproject.org/files/ENCFF297OMH/@@download/ENCFF297OMH.bed.gz hg19 released mild to moderate bottlenecking, antibody characterized with exemption missing control alignments ENCFF493MEL bigBed narrowPeak conservative idr thresholded peaks ENCSR742IDN ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2C1-human ENCAB324ARN DNA False 2017-01-27 ENCODE 1, 2 ENCFF297OMH 541525 ENCODE Processing Pipeline 9cb241a32e9723aa73135133ad902b3f https://www.encodeproject.org/files/ENCFF493MEL/@@download/ENCFF493MEL.bigBed hg19 released mild to moderate bottlenecking, antibody characterized with exemption missing control alignments ENCFF664ZGR bed narrowPeak optimal idr thresholded peaks ENCSR742IDN ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2C1-human ENCAB324ARN DNA False 2017-01-27 ENCODE 1, 2 ENCFF001TDO, ENCFF406JPU, ENCFF497RBU, ENCFF735EGA 286705 ENCODE Processing Pipeline 99866240a9404333b974b22bd1667736 https://www.encodeproject.org/files/ENCFF664ZGR/@@download/ENCFF664ZGR.bed.gz hg19 released mild to moderate bottlenecking, antibody characterized with exemption missing control alignments ENCFF270WNW bigBed narrowPeak peaks ENCSR742IDN ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2C1-human ENCAB324ARN DNA False 2017-01-27 ENCODE 1 ENCFF735EGA 13158172 ENCODE Processing Pipeline b60586b1f1d23cdfd6a50a4d4cb63da4 https://www.encodeproject.org/files/ENCFF270WNW/@@download/ENCFF270WNW.bigBed hg19 released mild to moderate bottlenecking, antibody characterized with exemption missing control alignments ENCFF072KAB bigBed narrowPeak peaks ENCSR742IDN ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2C1-human ENCAB324ARN DNA False 2017-01-27 ENCODE 2 ENCFF497RBU 13028892 ENCODE Processing Pipeline 3c8dab9969bbb9e272224fec29db44bd https://www.encodeproject.org/files/ENCFF072KAB/@@download/ENCFF072KAB.bigBed hg19 released mild to moderate bottlenecking, antibody characterized with exemption missing control alignments ENCFF732KCI bigBed narrowPeak optimal idr thresholded peaks ENCSR742IDN ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2C1-human ENCAB324ARN DNA False 2017-01-27 ENCODE 1, 2 ENCFF664ZGR 651022 ENCODE Processing Pipeline 3afea4b3ac1e45eb4d7bb0d8750dfc9e https://www.encodeproject.org/files/ENCFF732KCI/@@download/ENCFF732KCI.bigBed hg19 released mild to moderate bottlenecking, antibody characterized with exemption missing control alignments ENCFF301CSJ bigWig signal p-value ENCSR742IDN ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2C1-human ENCAB324ARN DNA False 2017-01-27 ENCODE 1 ENCFF149WGG 1019418977 ENCODE Processing Pipeline abb134ab656a3634c9d2fba655b06293 https://www.encodeproject.org/files/ENCFF301CSJ/@@download/ENCFF301CSJ.bigWig GRCh38 released mild to moderate bottlenecking, antibody characterized with exemption missing control alignments ENCFF654AWT bigWig signal p-value ENCSR742IDN ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2C1-human ENCAB324ARN DNA False 2017-01-27 ENCODE 2 ENCFF315DCZ 1301311294 ENCODE Processing Pipeline c271d6dbf23b1550a792f6cbf8e3e2e7 https://www.encodeproject.org/files/ENCFF654AWT/@@download/ENCFF654AWT.bigWig GRCh38 released mild to moderate bottlenecking, antibody characterized with exemption missing control alignments ENCFF818PQS bigWig signal p-value ENCSR742IDN ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2C1-human ENCAB324ARN DNA False 2017-01-27 ENCODE 1, 2 ENCFF149WGG, ENCFF315DCZ 1848166236 ENCODE Processing Pipeline bde9d951930e57f645106854ef703b48 https://www.encodeproject.org/files/ENCFF818PQS/@@download/ENCFF818PQS.bigWig GRCh38 released mild to moderate bottlenecking, antibody characterized with exemption missing control alignments ENCFF505MMO bigWig fold change over control ENCSR742IDN ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2C1-human ENCAB324ARN DNA False 2017-01-27 ENCODE 1 ENCFF149WGG 1092912885 ENCODE Processing Pipeline 989af4dc7597d807ebc3b55e9e50fd36 https://www.encodeproject.org/files/ENCFF505MMO/@@download/ENCFF505MMO.bigWig GRCh38 released mild to moderate bottlenecking, antibody characterized with exemption missing control alignments ENCFF324PFP bigWig fold change over control ENCSR742IDN ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2C1-human ENCAB324ARN DNA False 2017-01-27 ENCODE 2 ENCFF315DCZ 1496472184 ENCODE Processing Pipeline a3b6dbcc11b3980fad79c5aa6e473ae4 https://www.encodeproject.org/files/ENCFF324PFP/@@download/ENCFF324PFP.bigWig GRCh38 released mild to moderate bottlenecking, antibody characterized with exemption missing control alignments ENCFF987BMP bigWig fold change over control ENCSR742IDN ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2C1-human ENCAB324ARN DNA False 2017-01-27 ENCODE 1, 2 ENCFF149WGG, ENCFF315DCZ 2261915647 ENCODE Processing Pipeline f262755bf5f4ef3ab71445ea09c0cc2b https://www.encodeproject.org/files/ENCFF987BMP/@@download/ENCFF987BMP.bigWig GRCh38 released mild to moderate bottlenecking, antibody characterized with exemption missing control alignments ENCFF852JOM bed narrowPeak peaks ENCSR742IDN ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2C1-human ENCAB324ARN DNA False 2017-01-27 ENCODE 2 ENCFF315DCZ 7122748 ENCODE Processing Pipeline f9efad505808eb1be5230fcd9a4aaf96 https://www.encodeproject.org/files/ENCFF852JOM/@@download/ENCFF852JOM.bed.gz GRCh38 released mild to moderate bottlenecking, antibody characterized with exemption missing control alignments ENCFF492LLG bed narrowPeak peaks ENCSR742IDN ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2C1-human ENCAB324ARN DNA False 2017-01-27 ENCODE 1 ENCFF149WGG 6570700 ENCODE Processing Pipeline 36fcc01d2831f669db7f8c1f73f9cd15 https://www.encodeproject.org/files/ENCFF492LLG/@@download/ENCFF492LLG.bed.gz GRCh38 released mild to moderate bottlenecking, antibody characterized with exemption missing control alignments ENCFF477IDC bed narrowPeak conservative idr thresholded peaks ENCSR742IDN ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2C1-human ENCAB324ARN DNA False 2017-01-27 ENCODE 1, 2 ENCFF272PSH, ENCFF419RSJ, ENCFF492LLG, ENCFF852JOM 221082 ENCODE Processing Pipeline fb2e2a70c2ef942d80157f996139f369 https://www.encodeproject.org/files/ENCFF477IDC/@@download/ENCFF477IDC.bed.gz GRCh38 released mild to moderate bottlenecking, antibody characterized with exemption missing control alignments ENCFF272PSH bed narrowPeak peaks ENCSR742IDN ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2C1-human ENCAB324ARN DNA False 2017-01-27 ENCODE 1, 2 ENCFF149WGG, ENCFF315DCZ 7257859 ENCODE Processing Pipeline 9dac8e1c7d8822de2b7787d37b2e8918 https://www.encodeproject.org/files/ENCFF272PSH/@@download/ENCFF272PSH.bed.gz GRCh38 released mild to moderate bottlenecking, antibody characterized with exemption missing control alignments ENCFF017CEV bigBed narrowPeak peaks ENCSR742IDN ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2C1-human ENCAB324ARN DNA False 2017-01-27 ENCODE 1 ENCFF492LLG 13163764 ENCODE Processing Pipeline 6f1707a2a52d338c40793db3aa05139e https://www.encodeproject.org/files/ENCFF017CEV/@@download/ENCFF017CEV.bigBed GRCh38 released mild to moderate bottlenecking, antibody characterized with exemption missing control alignments ENCFF901OGD bigBed narrowPeak peaks ENCSR742IDN ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2C1-human ENCAB324ARN DNA False 2017-01-27 ENCODE 2 ENCFF852JOM 13025058 ENCODE Processing Pipeline 1de8d208c746712ea2518c80ca7ce7f7 https://www.encodeproject.org/files/ENCFF901OGD/@@download/ENCFF901OGD.bigBed GRCh38 released mild to moderate bottlenecking, antibody characterized with exemption missing control alignments ENCFF023XHV bed narrowPeak optimal idr thresholded peaks ENCSR742IDN ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2C1-human ENCAB324ARN DNA False 2017-01-27 ENCODE 1, 2 ENCFF272PSH, ENCFF419RSJ, ENCFF492LLG, ENCFF852JOM 289552 ENCODE Processing Pipeline 054dea6f6c2879fc4cb6179c342a2214 https://www.encodeproject.org/files/ENCFF023XHV/@@download/ENCFF023XHV.bed.gz GRCh38 released mild to moderate bottlenecking, antibody characterized with exemption missing control alignments ENCFF826HUX bigBed narrowPeak optimal idr thresholded peaks ENCSR742IDN ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2C1-human ENCAB324ARN DNA False 2017-01-27 ENCODE 1, 2 ENCFF023XHV 657513 ENCODE Processing Pipeline 2d6b06f5c8e2f6dfe405c7ca8784978b https://www.encodeproject.org/files/ENCFF826HUX/@@download/ENCFF826HUX.bigBed GRCh38 released mild to moderate bottlenecking, antibody characterized with exemption missing control alignments ENCFF475DJP bigBed narrowPeak peaks ENCSR742IDN ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2C1-human ENCAB324ARN DNA False 2017-01-27 ENCODE 1, 2 ENCFF272PSH 13069053 ENCODE Processing Pipeline 8dd2d43ed689acfd64a2e86dec037dd1 https://www.encodeproject.org/files/ENCFF475DJP/@@download/ENCFF475DJP.bigBed GRCh38 released mild to moderate bottlenecking, antibody characterized with exemption missing control alignments ENCFF854SXG bigBed narrowPeak conservative idr thresholded peaks ENCSR742IDN ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2C1-human ENCAB324ARN DNA False 2017-01-27 ENCODE 1, 2 ENCFF477IDC 544232 ENCODE Processing Pipeline be5a07d277e2b896b3e8301f53a91390 https://www.encodeproject.org/files/ENCFF854SXG/@@download/ENCFF854SXG.bigBed GRCh38 released mild to moderate bottlenecking, antibody characterized with exemption missing control alignments ENCFF862SVG bam unfiltered alignments ENCSR353HEP ChIP-seq EFO:0002067 K562 cell line Homo sapiens TARDBP-human ENCAB000AUF DNA see document see document False 2014-07-07 ENCODE 1 50 ENCFF002BFS, ENCFF807MUK 1313501295 ENCODE Processing Pipeline 29b3850bb56c3cdaa3ab6d436dc4ce2d https://www.encodeproject.org/files/ENCFF862SVG/@@download/ENCFF862SVG.bam hg19 released low read depth ENCFF750GXR bam unfiltered alignments ENCSR353HEP ChIP-seq EFO:0002067 K562 cell line Homo sapiens TARDBP-human ENCAB000AUF DNA see document see document False 2014-07-07 ENCODE 2 50 ENCFF002BFT, ENCFF807MUK 1768880450 ENCODE Processing Pipeline a29c338224b46e2c90e8f93cbf422827 https://www.encodeproject.org/files/ENCFF750GXR/@@download/ENCFF750GXR.bam hg19 released low read depth ENCFF899VCS bam alignments ENCSR353HEP ChIP-seq EFO:0002067 K562 cell line Homo sapiens TARDBP-human ENCAB000AUF DNA see document see document False 2014-07-07 ENCODE 1 50 ENCFF002BFS, ENCFF807MUK 984850386 ENCODE Processing Pipeline 73cfaae47e2222015917d2ebb769e83c https://www.encodeproject.org/files/ENCFF899VCS/@@download/ENCFF899VCS.bam hg19 released low read depth ENCFF065DOQ bam alignments ENCSR353HEP ChIP-seq EFO:0002067 K562 cell line Homo sapiens TARDBP-human ENCAB000AUF DNA see document see document False 2014-07-07 ENCODE 2 50 ENCFF002BFT, ENCFF807MUK 1309733892 ENCODE Processing Pipeline 8592c0e7c9f1087a46d238dacff4942a https://www.encodeproject.org/files/ENCFF065DOQ/@@download/ENCFF065DOQ.bam hg19 released low read depth ENCFF002BFS fastq reads ENCSR353HEP ChIP-seq EFO:0002067 K562 cell line Homo sapiens TARDBP-human ENCAB000AUF DNA see document see document False 2014-07-07 ENCODE 1 1 50 single-ended 1214732073 Richard Myers, HAIB d89727d25925869bfb4043a4ecfaf86a SRA:SRR5338634 https://www.encodeproject.org/files/ENCFF002BFS/@@download/ENCFF002BFS.fastq.gz Illumina HiSeq 2000 /files/ENCFF002BGC/ released low read depth ENCFF002BFT fastq reads ENCSR353HEP ChIP-seq EFO:0002067 K562 cell line Homo sapiens TARDBP-human ENCAB000AUF DNA see document see document False 2014-07-07 ENCODE 2 1 50 single-ended 1637372619 Richard Myers, HAIB 87a727b35f052791014f38a1566f93ce SRA:SRR5338633 https://www.encodeproject.org/files/ENCFF002BFT/@@download/ENCFF002BFT.fastq.gz Illumina HiSeq 2000 /files/ENCFF002BGB/ released low read depth ENCFF391NMB bigWig signal p-value ENCSR353HEP ChIP-seq EFO:0002067 K562 cell line Homo sapiens TARDBP-human ENCAB000AUF DNA see document see document False 2014-07-07 ENCODE 1 ENCFF023YMB, ENCFF899VCS 608745703 ENCODE Processing Pipeline c725a61d310243ebeaaf1b2adbaee961 https://www.encodeproject.org/files/ENCFF391NMB/@@download/ENCFF391NMB.bigWig hg19 released low read depth ENCFF290CZK bigWig fold change over control ENCSR353HEP ChIP-seq EFO:0002067 K562 cell line Homo sapiens TARDBP-human ENCAB000AUF DNA see document see document False 2014-07-07 ENCODE 1 ENCFF023YMB, ENCFF899VCS 418346588 ENCODE Processing Pipeline cb67fb1aa6a94dc13f8e09b9951ce7cc https://www.encodeproject.org/files/ENCFF290CZK/@@download/ENCFF290CZK.bigWig hg19 released low read depth ENCFF870SDL bigWig signal p-value ENCSR353HEP ChIP-seq EFO:0002067 K562 cell line Homo sapiens TARDBP-human ENCAB000AUF DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF023YMB, ENCFF065DOQ, ENCFF092ACZ, ENCFF899VCS 1083769087 ENCODE Processing Pipeline da8c1cc7593a485e22f46dfcaf4bffbb https://www.encodeproject.org/files/ENCFF870SDL/@@download/ENCFF870SDL.bigWig hg19 released low read depth ENCFF580OUE bigWig fold change over control ENCSR353HEP ChIP-seq EFO:0002067 K562 cell line Homo sapiens TARDBP-human ENCAB000AUF DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF023YMB, ENCFF065DOQ, ENCFF092ACZ, ENCFF899VCS 972316305 ENCODE Processing Pipeline 7adc7f21cd6f6101ac3a28914208febb https://www.encodeproject.org/files/ENCFF580OUE/@@download/ENCFF580OUE.bigWig hg19 released low read depth ENCFF032HCI bed narrowPeak peaks ENCSR353HEP ChIP-seq EFO:0002067 K562 cell line Homo sapiens TARDBP-human ENCAB000AUF DNA see document see document False 2014-07-07 ENCODE 1 ENCFF023YMB, ENCFF899VCS 5573738 ENCODE Processing Pipeline d76d00eebebc49f8761c93cad455787a https://www.encodeproject.org/files/ENCFF032HCI/@@download/ENCFF032HCI.bed.gz hg19 released low read depth ENCFF139HGF bed narrowPeak peaks ENCSR353HEP ChIP-seq EFO:0002067 K562 cell line Homo sapiens TARDBP-human ENCAB000AUF DNA see document see document False 2014-07-07 ENCODE 2 ENCFF065DOQ, ENCFF092ACZ 5524228 ENCODE Processing Pipeline 2aae8c1ccd397c34a1d4ed546f80f4b6 https://www.encodeproject.org/files/ENCFF139HGF/@@download/ENCFF139HGF.bed.gz hg19 released low read depth ENCFF027BJC bed narrowPeak peaks ENCSR353HEP ChIP-seq EFO:0002067 K562 cell line Homo sapiens TARDBP-human ENCAB000AUF DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF023YMB, ENCFF065DOQ, ENCFF092ACZ, ENCFF899VCS 6662908 ENCODE Processing Pipeline 8c224e9c536f38f96f36cb2caa2b4f25 https://www.encodeproject.org/files/ENCFF027BJC/@@download/ENCFF027BJC.bed.gz hg19 released low read depth ENCFF617OIZ bigBed narrowPeak peaks ENCSR353HEP ChIP-seq EFO:0002067 K562 cell line Homo sapiens TARDBP-human ENCAB000AUF DNA see document see document False 2014-07-07 ENCODE 2 ENCFF139HGF 11159243 ENCODE Processing Pipeline aac6af610ac0b9391a0dc4dc60952b1c https://www.encodeproject.org/files/ENCFF617OIZ/@@download/ENCFF617OIZ.bigBed hg19 released low read depth ENCFF384RFK bigBed narrowPeak peaks ENCSR353HEP ChIP-seq EFO:0002067 K562 cell line Homo sapiens TARDBP-human ENCAB000AUF DNA see document see document False 2014-07-07 ENCODE 1 ENCFF032HCI 13138378 ENCODE Processing Pipeline 893fa0a224f9fd2117c3dee9f3178e1c https://www.encodeproject.org/files/ENCFF384RFK/@@download/ENCFF384RFK.bigBed hg19 released low read depth ENCFF260SQQ bigBed narrowPeak peaks ENCSR353HEP ChIP-seq EFO:0002067 K562 cell line Homo sapiens TARDBP-human ENCAB000AUF DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF027BJC 13337019 ENCODE Processing Pipeline 93d5f9ecde889b6bab92d62ccc9a9680 https://www.encodeproject.org/files/ENCFF260SQQ/@@download/ENCFF260SQQ.bigBed hg19 released low read depth ENCFF063ILV bed narrowPeak conservative idr thresholded peaks ENCSR353HEP ChIP-seq EFO:0002067 K562 cell line Homo sapiens TARDBP-human ENCAB000AUF DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF001TDO, ENCFF027BJC, ENCFF032HCI, ENCFF139HGF 112227 ENCODE Processing Pipeline 25c11cd099248baf012a383cfc47ae2d https://www.encodeproject.org/files/ENCFF063ILV/@@download/ENCFF063ILV.bed.gz hg19 released low read depth ENCFF968EAL bed narrowPeak optimal idr thresholded peaks ENCSR353HEP ChIP-seq EFO:0002067 K562 cell line Homo sapiens TARDBP-human ENCAB000AUF DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF001TDO, ENCFF027BJC, ENCFF032HCI, ENCFF139HGF 136479 ENCODE Processing Pipeline bba8e09d361ca0cf21a60e83afff4fcd https://www.encodeproject.org/files/ENCFF968EAL/@@download/ENCFF968EAL.bed.gz hg19 released low read depth ENCFF940JPY bigBed narrowPeak conservative idr thresholded peaks ENCSR353HEP ChIP-seq EFO:0002067 K562 cell line Homo sapiens TARDBP-human ENCAB000AUF DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF063ILV 262618 ENCODE Processing Pipeline 78259c9cd93f2d6907f93af709cfb903 https://www.encodeproject.org/files/ENCFF940JPY/@@download/ENCFF940JPY.bigBed hg19 released low read depth ENCFF686KSF bigBed narrowPeak optimal idr thresholded peaks ENCSR353HEP ChIP-seq EFO:0002067 K562 cell line Homo sapiens TARDBP-human ENCAB000AUF DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF968EAL 299702 ENCODE Processing Pipeline 88b5af348e10b0d70001cc733d8673df https://www.encodeproject.org/files/ENCFF686KSF/@@download/ENCFF686KSF.bigBed hg19 released low read depth ENCFF421GUB bigWig signal p-value ENCSR353HEP ChIP-seq EFO:0002067 K562 cell line Homo sapiens TARDBP-human ENCAB000AUF DNA see document see document False 2014-07-07 ENCODE 2 ENCFF065DOQ, ENCFF092ACZ 523234890 ENCODE Processing Pipeline 681529f2e4e13651aa048ae224282b26 https://www.encodeproject.org/files/ENCFF421GUB/@@download/ENCFF421GUB.bigWig hg19 released low read depth ENCFF433SGA bigWig fold change over control ENCSR353HEP ChIP-seq EFO:0002067 K562 cell line Homo sapiens TARDBP-human ENCAB000AUF DNA see document see document False 2014-07-07 ENCODE 2 ENCFF065DOQ, ENCFF092ACZ 512391931 ENCODE Processing Pipeline adcbffb833140fa9b766172c509954c1 https://www.encodeproject.org/files/ENCFF433SGA/@@download/ENCFF433SGA.bigWig hg19 released low read depth ENCFF866DXQ bam unfiltered alignments ENCSR353HEP ChIP-seq EFO:0002067 K562 cell line Homo sapiens TARDBP-human ENCAB000AUF DNA see document see document False 2014-07-07 ENCODE 2 50 ENCFF002BFT, ENCFF643CGH 1775290559 ENCODE Processing Pipeline a3ea240753398cbe69861070292c8c18 https://www.encodeproject.org/files/ENCFF866DXQ/@@download/ENCFF866DXQ.bam GRCh38 released low read depth ENCFF556EGU bam unfiltered alignments ENCSR353HEP ChIP-seq EFO:0002067 K562 cell line Homo sapiens TARDBP-human ENCAB000AUF DNA see document see document False 2014-07-07 ENCODE 1 50 ENCFF002BFS, ENCFF643CGH 1315953002 ENCODE Processing Pipeline 136b500f938f8eeec0a1b8b7f9fa5a7b https://www.encodeproject.org/files/ENCFF556EGU/@@download/ENCFF556EGU.bam GRCh38 released low read depth ENCFF283ZIL bam alignments ENCSR353HEP ChIP-seq EFO:0002067 K562 cell line Homo sapiens TARDBP-human ENCAB000AUF DNA see document see document False 2014-07-07 ENCODE 1 50 ENCFF002BFS, ENCFF643CGH 984473579 ENCODE Processing Pipeline 9ea454d2dafc210153040838ae40cb7d https://www.encodeproject.org/files/ENCFF283ZIL/@@download/ENCFF283ZIL.bam GRCh38 released low read depth ENCFF903JXA bam alignments ENCSR353HEP ChIP-seq EFO:0002067 K562 cell line Homo sapiens TARDBP-human ENCAB000AUF DNA see document see document False 2014-07-07 ENCODE 2 50 ENCFF002BFT, ENCFF643CGH 1309458087 ENCODE Processing Pipeline 916e7f623e602ee0fcd41501175cf5f3 https://www.encodeproject.org/files/ENCFF903JXA/@@download/ENCFF903JXA.bam GRCh38 released low read depth ENCFF399SVX bigWig signal p-value ENCSR353HEP ChIP-seq EFO:0002067 K562 cell line Homo sapiens TARDBP-human ENCAB000AUF DNA see document see document False 2014-07-07 ENCODE 1 ENCFF283ZIL, ENCFF709XAA 653317266 ENCODE Processing Pipeline b24ef626eb29a732d9bc7c3e77653b0f https://www.encodeproject.org/files/ENCFF399SVX/@@download/ENCFF399SVX.bigWig GRCh38 released low read depth ENCFF540MPS bigWig signal p-value ENCSR353HEP ChIP-seq EFO:0002067 K562 cell line Homo sapiens TARDBP-human ENCAB000AUF DNA see document see document False 2014-07-07 ENCODE 2 ENCFF285EWB, ENCFF903JXA 522672374 ENCODE Processing Pipeline 86b9c8e495d97130fd84a45fab43d5cc https://www.encodeproject.org/files/ENCFF540MPS/@@download/ENCFF540MPS.bigWig GRCh38 released low read depth ENCFF318UDN bigWig signal p-value ENCSR353HEP ChIP-seq EFO:0002067 K562 cell line Homo sapiens TARDBP-human ENCAB000AUF DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF283ZIL, ENCFF285EWB, ENCFF709XAA, ENCFF903JXA 1157951109 ENCODE Processing Pipeline f4ff06d8a3d921476a8a99006fdebbf2 https://www.encodeproject.org/files/ENCFF318UDN/@@download/ENCFF318UDN.bigWig GRCh38 released low read depth ENCFF254OXZ bigWig fold change over control ENCSR353HEP ChIP-seq EFO:0002067 K562 cell line Homo sapiens TARDBP-human ENCAB000AUF DNA see document see document False 2014-07-07 ENCODE 1 ENCFF283ZIL, ENCFF709XAA 407588971 ENCODE Processing Pipeline 170df6fdc5a4c36df8027009b793e304 https://www.encodeproject.org/files/ENCFF254OXZ/@@download/ENCFF254OXZ.bigWig GRCh38 released low read depth ENCFF524XVE bigWig fold change over control ENCSR353HEP ChIP-seq EFO:0002067 K562 cell line Homo sapiens TARDBP-human ENCAB000AUF DNA see document see document False 2014-07-07 ENCODE 2 ENCFF285EWB, ENCFF903JXA 518265468 ENCODE Processing Pipeline 2619a789c2428a93da6fb6c9c071dde7 https://www.encodeproject.org/files/ENCFF524XVE/@@download/ENCFF524XVE.bigWig GRCh38 released low read depth ENCFF623ZTZ bigWig fold change over control ENCSR353HEP ChIP-seq EFO:0002067 K562 cell line Homo sapiens TARDBP-human ENCAB000AUF DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF283ZIL, ENCFF285EWB, ENCFF709XAA, ENCFF903JXA 1009070837 ENCODE Processing Pipeline f6a87fa76ee0509048fc18e460d03fa6 https://www.encodeproject.org/files/ENCFF623ZTZ/@@download/ENCFF623ZTZ.bigWig GRCh38 released low read depth ENCFF459XMM bed narrowPeak peaks ENCSR353HEP ChIP-seq EFO:0002067 K562 cell line Homo sapiens TARDBP-human ENCAB000AUF DNA see document see document False 2014-07-07 ENCODE 1 ENCFF283ZIL, ENCFF709XAA 5535441 ENCODE Processing Pipeline 9f36fa5536e07057a8bd55924ecf5b34 https://www.encodeproject.org/files/ENCFF459XMM/@@download/ENCFF459XMM.bed.gz GRCh38 released low read depth ENCFF373MAQ bed narrowPeak peaks ENCSR353HEP ChIP-seq EFO:0002067 K562 cell line Homo sapiens TARDBP-human ENCAB000AUF DNA see document see document False 2014-07-07 ENCODE 2 ENCFF285EWB, ENCFF903JXA 5517753 ENCODE Processing Pipeline c44fbb416faed138bc2700cb3ca57560 https://www.encodeproject.org/files/ENCFF373MAQ/@@download/ENCFF373MAQ.bed.gz GRCh38 released low read depth ENCFF113GGC bigBed narrowPeak peaks ENCSR353HEP ChIP-seq EFO:0002067 K562 cell line Homo sapiens TARDBP-human ENCAB000AUF DNA see document see document False 2014-07-07 ENCODE 1 ENCFF459XMM 13125549 ENCODE Processing Pipeline e0bfcfe173f3adc8e07227809c02ed1e https://www.encodeproject.org/files/ENCFF113GGC/@@download/ENCFF113GGC.bigBed GRCh38 released low read depth ENCFF223LCM bed narrowPeak peaks ENCSR353HEP ChIP-seq EFO:0002067 K562 cell line Homo sapiens TARDBP-human ENCAB000AUF DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF283ZIL, ENCFF285EWB, ENCFF709XAA, ENCFF903JXA 6646058 ENCODE Processing Pipeline e286163625de797d410634fe70bc0aa8 https://www.encodeproject.org/files/ENCFF223LCM/@@download/ENCFF223LCM.bed.gz GRCh38 released low read depth ENCFF599ZGN bigBed narrowPeak peaks ENCSR353HEP ChIP-seq EFO:0002067 K562 cell line Homo sapiens TARDBP-human ENCAB000AUF DNA see document see document False 2014-07-07 ENCODE 2 ENCFF373MAQ 11165660 ENCODE Processing Pipeline b27427d29707fe7fadf8d79f035f861f https://www.encodeproject.org/files/ENCFF599ZGN/@@download/ENCFF599ZGN.bigBed GRCh38 released low read depth ENCFF070XNC bigBed narrowPeak peaks ENCSR353HEP ChIP-seq EFO:0002067 K562 cell line Homo sapiens TARDBP-human ENCAB000AUF DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF223LCM 13355967 ENCODE Processing Pipeline 5bed44453d1eec2c924d5ad6434ef535 https://www.encodeproject.org/files/ENCFF070XNC/@@download/ENCFF070XNC.bigBed GRCh38 released low read depth ENCFF790MVV bigBed narrowPeak conservative idr thresholded peaks ENCSR353HEP ChIP-seq EFO:0002067 K562 cell line Homo sapiens TARDBP-human ENCAB000AUF DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF213EHL 264801 ENCODE Processing Pipeline de3c950b92d97c7c7ea22774d86d905c https://www.encodeproject.org/files/ENCFF790MVV/@@download/ENCFF790MVV.bigBed GRCh38 released low read depth ENCFF213EHL bed narrowPeak conservative idr thresholded peaks ENCSR353HEP ChIP-seq EFO:0002067 K562 cell line Homo sapiens TARDBP-human ENCAB000AUF DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF223LCM, ENCFF373MAQ, ENCFF419RSJ, ENCFF459XMM 112827 ENCODE Processing Pipeline e870575eff4d1e6f09e3962b18bac47c https://www.encodeproject.org/files/ENCFF213EHL/@@download/ENCFF213EHL.bed.gz GRCh38 released low read depth ENCFF641AXD bed narrowPeak optimal idr thresholded peaks ENCSR353HEP ChIP-seq EFO:0002067 K562 cell line Homo sapiens TARDBP-human ENCAB000AUF DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF223LCM, ENCFF373MAQ, ENCFF419RSJ, ENCFF459XMM 137540 ENCODE Processing Pipeline 7e814721301eb261472ed85b8adbeed3 https://www.encodeproject.org/files/ENCFF641AXD/@@download/ENCFF641AXD.bed.gz GRCh38 released low read depth ENCFF059EJM bigBed narrowPeak optimal idr thresholded peaks ENCSR353HEP ChIP-seq EFO:0002067 K562 cell line Homo sapiens TARDBP-human ENCAB000AUF DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF641AXD 302787 ENCODE Processing Pipeline 957474ae04b9926869957b7a451f539e https://www.encodeproject.org/files/ENCFF059EJM/@@download/ENCFF059EJM.bigBed GRCh38 released low read depth ENCFF643PYI bam unfiltered alignments ENCSR975SSR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ELF1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 50 ENCFF073VHT, ENCFF564LFT, ENCFF807MUK 1902735418 ENCODE Processing Pipeline 00243d5415118c956eee9981195635b3 https://www.encodeproject.org/files/ENCFF643PYI/@@download/ENCFF643PYI.bam hg19 released missing genetic modification characterization ENCFF915FMM bam unfiltered alignments ENCSR975SSR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ELF1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 50 ENCFF253BVP, ENCFF649VGU, ENCFF807MUK 1599190117 ENCODE Processing Pipeline de1da9f49f920253705b0831e3e3f8f5 https://www.encodeproject.org/files/ENCFF915FMM/@@download/ENCFF915FMM.bam hg19 released missing genetic modification characterization ENCFF253BVP fastq reads ENCSR975SSR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ELF1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 1 50 single-ended 600089269 Kevin White, UChicago f7eb690a0f4336cf279686b036345c97 SRA:SRR6214169 https://www.encodeproject.org/files/ENCFF253BVP/@@download/ENCFF253BVP.fastq.gz Illumina HiSeq 2500 /files/ENCFF422MHT/, /files/ENCFF564OXD/ released missing genetic modification characterization ENCFF564LFT fastq reads ENCSR975SSR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ELF1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 1 50 single-ended 763922049 Kevin White, UChicago 044a3d3330d7098681762b437e705baa SRA:SRR6214167 https://www.encodeproject.org/files/ENCFF564LFT/@@download/ENCFF564LFT.fastq.gz Illumina HiSeq 2500 /files/ENCFF422MHT/, /files/ENCFF564OXD/ released missing genetic modification characterization ENCFF073VHT fastq reads ENCSR975SSR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ELF1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 1 50 single-ended 973939984 Kevin White, UChicago 1c7d02591bb54d1d2c05ff8a62a5845a SRA:SRR6214168 https://www.encodeproject.org/files/ENCFF073VHT/@@download/ENCFF073VHT.fastq.gz Illumina HiSeq 2000 /files/ENCFF422MHT/, /files/ENCFF564OXD/ released missing genetic modification characterization ENCFF649VGU fastq reads ENCSR975SSR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ELF1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 1 50 single-ended 839622902 Kevin White, UChicago 68f1dde6e2135eec2d0e5633d4b2a4c3 SRA:SRR6214170 https://www.encodeproject.org/files/ENCFF649VGU/@@download/ENCFF649VGU.fastq.gz Illumina HiSeq 2000 /files/ENCFF422MHT/, /files/ENCFF564OXD/ released missing genetic modification characterization ENCFF775ZRK bam alignments ENCSR975SSR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ELF1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 50 ENCFF253BVP, ENCFF649VGU, ENCFF807MUK 1272637203 ENCODE Processing Pipeline 4e3893e7191613f3d25b40dd4e3da005 https://www.encodeproject.org/files/ENCFF775ZRK/@@download/ENCFF775ZRK.bam hg19 released missing genetic modification characterization ENCFF702YSS bam alignments ENCSR975SSR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ELF1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 50 ENCFF073VHT, ENCFF564LFT, ENCFF807MUK 1503614871 ENCODE Processing Pipeline fb0efae89bafbaf3776018ea30a13a6f https://www.encodeproject.org/files/ENCFF702YSS/@@download/ENCFF702YSS.bam hg19 released missing genetic modification characterization ENCFF817UBQ bigWig signal p-value ENCSR975SSR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ELF1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF702YSS, ENCFF891YJS 519346193 ENCODE Processing Pipeline 9f88c125765128d9705b41a1edeb2ee1 https://www.encodeproject.org/files/ENCFF817UBQ/@@download/ENCFF817UBQ.bigWig hg19 released missing genetic modification characterization ENCFF117KZQ bigWig signal p-value ENCSR975SSR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ELF1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF775ZRK, ENCFF891YJS 516932797 ENCODE Processing Pipeline ad169b53f69d9adb3ca5c71264262d83 https://www.encodeproject.org/files/ENCFF117KZQ/@@download/ENCFF117KZQ.bigWig hg19 released missing genetic modification characterization ENCFF921NSY bigWig signal p-value ENCSR975SSR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ELF1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF702YSS, ENCFF775ZRK, ENCFF891YJS 508673087 ENCODE Processing Pipeline 4524a07c2b32a1c14ed45dd829301b85 https://www.encodeproject.org/files/ENCFF921NSY/@@download/ENCFF921NSY.bigWig hg19 released missing genetic modification characterization ENCFF644UTC bigWig fold change over control ENCSR975SSR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ELF1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF775ZRK, ENCFF891YJS 531614910 ENCODE Processing Pipeline 40ac93901b04eb1cf2c9abe720ec5484 https://www.encodeproject.org/files/ENCFF644UTC/@@download/ENCFF644UTC.bigWig hg19 released missing genetic modification characterization ENCFF342URP bigWig fold change over control ENCSR975SSR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ELF1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF702YSS, ENCFF891YJS 606901157 ENCODE Processing Pipeline 0669a7d49ddfbc0c36b161ab9a402934 https://www.encodeproject.org/files/ENCFF342URP/@@download/ENCFF342URP.bigWig hg19 released missing genetic modification characterization ENCFF439ZHX bigWig fold change over control ENCSR975SSR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ELF1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF702YSS, ENCFF775ZRK, ENCFF891YJS 902259121 ENCODE Processing Pipeline 55b0a1fc3643bf70be4f1055235405b6 https://www.encodeproject.org/files/ENCFF439ZHX/@@download/ENCFF439ZHX.bigWig hg19 released missing genetic modification characterization ENCFF985HFC bigBed narrowPeak peaks ENCSR975SSR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ELF1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF241QBV 13202589 ENCODE Processing Pipeline 324c8456f43d9161b79a2557efc3838a https://www.encodeproject.org/files/ENCFF985HFC/@@download/ENCFF985HFC.bigBed hg19 released missing genetic modification characterization ENCFF241QBV bed narrowPeak peaks ENCSR975SSR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ELF1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF775ZRK, ENCFF891YJS 6254539 ENCODE Processing Pipeline c7fb7fb7e8669a0f4968aeb0331a514c https://www.encodeproject.org/files/ENCFF241QBV/@@download/ENCFF241QBV.bed.gz hg19 released missing genetic modification characterization ENCFF074NKQ bed narrowPeak peaks ENCSR975SSR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ELF1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF702YSS, ENCFF891YJS 6763727 ENCODE Processing Pipeline 4fcc50d833fbd8658c629457a34785d8 https://www.encodeproject.org/files/ENCFF074NKQ/@@download/ENCFF074NKQ.bed.gz hg19 released missing genetic modification characterization ENCFF882VDD bigBed narrowPeak peaks ENCSR975SSR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ELF1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF074NKQ 12973850 ENCODE Processing Pipeline ebe1470fdf4fdb5eaf4bdd657f8907b3 https://www.encodeproject.org/files/ENCFF882VDD/@@download/ENCFF882VDD.bigBed hg19 released missing genetic modification characterization ENCFF769RKU bed narrowPeak peaks ENCSR975SSR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ELF1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF702YSS, ENCFF775ZRK, ENCFF891YJS 7077032 ENCODE Processing Pipeline 67c5bc0bfa084f885cf4b8f972beb88e https://www.encodeproject.org/files/ENCFF769RKU/@@download/ENCFF769RKU.bed.gz hg19 released missing genetic modification characterization ENCFF221JWP bigBed narrowPeak peaks ENCSR975SSR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ELF1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF769RKU 12915645 ENCODE Processing Pipeline 5500d65992a89289605d8aae47322f31 https://www.encodeproject.org/files/ENCFF221JWP/@@download/ENCFF221JWP.bigBed hg19 released missing genetic modification characterization ENCFF994XOL bam unfiltered alignments ENCSR975SSR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ELF1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 50 ENCFF253BVP, ENCFF643CGH, ENCFF649VGU 1604761827 ENCODE Processing Pipeline 418cbdcbe3d4d8a236b45a706deb6aea https://www.encodeproject.org/files/ENCFF994XOL/@@download/ENCFF994XOL.bam GRCh38 released missing genetic modification characterization ENCFF245TDR bam unfiltered alignments ENCSR975SSR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ELF1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 50 ENCFF073VHT, ENCFF564LFT, ENCFF643CGH 1908589045 ENCODE Processing Pipeline 4732668a56671ab5b03bf61cfae31eae https://www.encodeproject.org/files/ENCFF245TDR/@@download/ENCFF245TDR.bam GRCh38 released missing genetic modification characterization ENCFF251EVS bam alignments ENCSR975SSR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ELF1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 50 ENCFF253BVP, ENCFF643CGH, ENCFF649VGU 1272061373 ENCODE Processing Pipeline f724c6fee7cb64da7fce256a7c52a66a https://www.encodeproject.org/files/ENCFF251EVS/@@download/ENCFF251EVS.bam GRCh38 released missing genetic modification characterization ENCFF619SRD bam alignments ENCSR975SSR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ELF1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 50 ENCFF073VHT, ENCFF564LFT, ENCFF643CGH 1502995676 ENCODE Processing Pipeline d4a8bec12dcdfa84026fbbc5a591496f https://www.encodeproject.org/files/ENCFF619SRD/@@download/ENCFF619SRD.bam GRCh38 released missing genetic modification characterization ENCFF582RKM bigWig signal p-value ENCSR975SSR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ELF1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF251EVS, ENCFF383YOE 520759103 ENCODE Processing Pipeline 96ca93a20017280f16da6ff08447373a https://www.encodeproject.org/files/ENCFF582RKM/@@download/ENCFF582RKM.bigWig GRCh38 released missing genetic modification characterization ENCFF738OCM bigWig signal p-value ENCSR975SSR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ELF1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF383YOE, ENCFF619SRD 526758348 ENCODE Processing Pipeline 404cdeb1818a61865cf5ef736d5dddc8 https://www.encodeproject.org/files/ENCFF738OCM/@@download/ENCFF738OCM.bigWig GRCh38 released missing genetic modification characterization ENCFF020INB bigWig signal p-value ENCSR975SSR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ELF1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF251EVS, ENCFF383YOE, ENCFF619SRD 514045023 ENCODE Processing Pipeline ae204c4809ea8948b1e67558904adf7f https://www.encodeproject.org/files/ENCFF020INB/@@download/ENCFF020INB.bigWig GRCh38 released missing genetic modification characterization ENCFF912FBW bigWig fold change over control ENCSR975SSR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ELF1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF251EVS, ENCFF383YOE 536719500 ENCODE Processing Pipeline 303ba7660b4728bdfec2a587edfbe2e7 https://www.encodeproject.org/files/ENCFF912FBW/@@download/ENCFF912FBW.bigWig GRCh38 released missing genetic modification characterization ENCFF956MOS bigWig fold change over control ENCSR975SSR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ELF1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF383YOE, ENCFF619SRD 611252888 ENCODE Processing Pipeline 1ecc94e0625a649f3c4b2b0a2615899c https://www.encodeproject.org/files/ENCFF956MOS/@@download/ENCFF956MOS.bigWig GRCh38 released missing genetic modification characterization ENCFF223LQK bigWig fold change over control ENCSR975SSR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ELF1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF251EVS, ENCFF383YOE, ENCFF619SRD 905925011 ENCODE Processing Pipeline fbae13aa0f255983090bc11b894e53a9 https://www.encodeproject.org/files/ENCFF223LQK/@@download/ENCFF223LQK.bigWig GRCh38 released missing genetic modification characterization ENCFF076JAN bigBed narrowPeak peaks ENCSR975SSR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ELF1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF377MIJ 12960501 ENCODE Processing Pipeline f4d7ddcd76b4342a0b4abedfb9c61f2a https://www.encodeproject.org/files/ENCFF076JAN/@@download/ENCFF076JAN.bigBed GRCh38 released missing genetic modification characterization ENCFF585YJH bed narrowPeak peaks ENCSR975SSR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ELF1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF251EVS, ENCFF383YOE, ENCFF619SRD 6980123 ENCODE Processing Pipeline b25ae3e587fa1b3b695b5a26d8d5895d https://www.encodeproject.org/files/ENCFF585YJH/@@download/ENCFF585YJH.bed.gz GRCh38 released missing genetic modification characterization ENCFF556XZO bigBed narrowPeak peaks ENCSR975SSR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ELF1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF585YJH 12920090 ENCODE Processing Pipeline 19d867825fdb762ea4225b70b78e9710 https://www.encodeproject.org/files/ENCFF556XZO/@@download/ENCFF556XZO.bigBed GRCh38 released missing genetic modification characterization ENCFF486DBE bed narrowPeak peaks ENCSR975SSR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ELF1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF251EVS, ENCFF383YOE 6067115 ENCODE Processing Pipeline 6b84b48b88aa8a9c5c12e65cdbb59469 https://www.encodeproject.org/files/ENCFF486DBE/@@download/ENCFF486DBE.bed.gz GRCh38 released missing genetic modification characterization ENCFF377MIJ bed narrowPeak peaks ENCSR975SSR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ELF1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF383YOE, ENCFF619SRD 6589744 ENCODE Processing Pipeline 0a96540658c319201364b42b128d28cb https://www.encodeproject.org/files/ENCFF377MIJ/@@download/ENCFF377MIJ.bed.gz GRCh38 released missing genetic modification characterization ENCFF647OPT bigBed narrowPeak peaks ENCSR975SSR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ELF1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF486DBE 13176911 ENCODE Processing Pipeline f767d038ab8c1133d7ce5e20d649f944 https://www.encodeproject.org/files/ENCFF647OPT/@@download/ENCFF647OPT.bigBed GRCh38 released missing genetic modification characterization ENCFF066UQP bed narrowPeak conservative idr thresholded peaks ENCSR975SSR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ELF1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF377MIJ, ENCFF419RSJ, ENCFF486DBE, ENCFF585YJH 366230 ENCODE Processing Pipeline c8b54cbeda8665b5f65875b54ca91909 https://www.encodeproject.org/files/ENCFF066UQP/@@download/ENCFF066UQP.bed.gz GRCh38 released missing genetic modification characterization ENCFF356HGO bigBed narrowPeak conservative idr thresholded peaks ENCSR975SSR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ELF1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF066UQP 865261 ENCODE Processing Pipeline 49288d96ea3226669ac7831375487d95 https://www.encodeproject.org/files/ENCFF356HGO/@@download/ENCFF356HGO.bigBed GRCh38 released missing genetic modification characterization ENCFF256CVB bed narrowPeak optimal idr thresholded peaks ENCSR975SSR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ELF1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF377MIJ, ENCFF419RSJ, ENCFF486DBE, ENCFF585YJH 368974 ENCODE Processing Pipeline d1a0dc47db40aa571af027ea0b93d037 https://www.encodeproject.org/files/ENCFF256CVB/@@download/ENCFF256CVB.bed.gz GRCh38 released missing genetic modification characterization ENCFF646JBO bigBed narrowPeak optimal idr thresholded peaks ENCSR975SSR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ELF1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF256CVB 871887 ENCODE Processing Pipeline e740795eb10776d14a776167ef5fdfef https://www.encodeproject.org/files/ENCFF646JBO/@@download/ENCFF646JBO.bigBed GRCh38 released missing genetic modification characterization ENCFF140VIF bed narrowPeak conservative idr thresholded peaks ENCSR975SSR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ELF1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF001TDO, ENCFF074NKQ, ENCFF241QBV, ENCFF769RKU 308977 ENCODE Processing Pipeline 3d0685831059d13fc3b7a4f661551f7a https://www.encodeproject.org/files/ENCFF140VIF/@@download/ENCFF140VIF.bed.gz hg19 released missing genetic modification characterization ENCFF889KVH bigBed narrowPeak conservative idr thresholded peaks ENCSR975SSR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ELF1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF140VIF 635183 ENCODE Processing Pipeline 2139b58bdaab1274c3c6e1c75022912b https://www.encodeproject.org/files/ENCFF889KVH/@@download/ENCFF889KVH.bigBed hg19 released missing genetic modification characterization ENCFF526EEI bed narrowPeak optimal idr thresholded peaks ENCSR975SSR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ELF1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF001TDO, ENCFF074NKQ, ENCFF241QBV, ENCFF769RKU 313782 ENCODE Processing Pipeline 1f4cf632566898df354da40c0e111751 https://www.encodeproject.org/files/ENCFF526EEI/@@download/ENCFF526EEI.bed.gz hg19 released missing genetic modification characterization ENCFF243YSE bigBed narrowPeak optimal idr thresholded peaks ENCSR975SSR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ELF1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF526EEI 642193 ENCODE Processing Pipeline 82cf13b4c1186eab882473aef1fa7f56 https://www.encodeproject.org/files/ENCFF243YSE/@@download/ENCFF243YSE.bigBed hg19 released missing genetic modification characterization ENCFF000YLB bigBed narrowPeak peaks ENCSR000EGC ChIP-seq EFO:0002067 K562 cell line Homo sapiens RCOR1-human ENCAB000AFJ DNA see document see document False 2012-05-14 ENCODE ENCFF001VMW 2497904 Michael Snyder, Stanford 691cac2a888e037b5cb7b5a5e26da56c https://www.encodeproject.org/files/ENCFF000YLB/@@download/ENCFF000YLB.bigBed hg19 archived low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF000YLC fastq reads ENCSR000EGC ChIP-seq EFO:0002067 K562 cell line Homo sapiens RCOR1-human ENCAB000AFJ DNA see document see document False 2012-05-14 ENCODE 1 1 36 single-ended 365553503 Michael Snyder, Stanford 54ef4dc9f1bdb7dda35dd7e1a3a95a52 https://www.encodeproject.org/files/ENCFF000YLC/@@download/ENCFF000YLC.fastq.gz Illumina Genome Analyzer /files/ENCFF000YRB/ released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF000YLE bam alignments ENCSR000EGC ChIP-seq EFO:0002067 K562 cell line Homo sapiens RCOR1-human ENCAB000AFJ DNA see document see document False 2012-05-14 ENCODE 1 1 436052157 Michael Snyder, Stanford 4621ce73ff075553a8554756a2e51e80 https://www.encodeproject.org/files/ENCFF000YLE/@@download/ENCFF000YLE.bam hg19 archived low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample, missing derived_from ENCFF000YLH fastq reads ENCSR000EGC ChIP-seq EFO:0002067 K562 cell line Homo sapiens RCOR1-human ENCAB000AFJ DNA see document see document False 2012-05-14 ENCODE 2 1 36 single-ended 1154048136 Michael Snyder, Stanford b8665c4d4e0579ce56def7dabbf2943d https://www.encodeproject.org/files/ENCFF000YLH/@@download/ENCFF000YLH.fastq.gz Illumina Genome Analyzer /files/ENCFF000YRB/ released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF000YLJ bigWig signal ENCSR000EGC ChIP-seq EFO:0002067 K562 cell line Homo sapiens RCOR1-human ENCAB000AFJ DNA see document see document False 2012-05-14 ENCODE 397398114 Michael Snyder, Stanford 6f29934b54504d8443eddd265b8ec87e https://www.encodeproject.org/files/ENCFF000YLJ/@@download/ENCFF000YLJ.bigWig hg19 archived low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample, missing derived_from ENCFF000YLK bam alignments ENCSR000EGC ChIP-seq EFO:0002067 K562 cell line Homo sapiens RCOR1-human ENCAB000AFJ DNA see document see document False 2012-05-14 ENCODE 2 1 596830064 Michael Snyder, Stanford 28e57f62bf6cf3c9d303bddf4a473d15 https://www.encodeproject.org/files/ENCFF000YLK/@@download/ENCFF000YLK.bam hg19 archived low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample, missing derived_from ENCFF001VMW bed narrowPeak peaks ENCSR000EGC ChIP-seq EFO:0002067 K562 cell line Homo sapiens RCOR1-human ENCAB000AFJ DNA see document see document False 2012-05-14 ENCODE 983518 Michael Snyder, Stanford 46643afa087886801b6ca67ad4b89878 https://www.encodeproject.org/files/ENCFF001VMW/@@download/ENCFF001VMW.bed.gz hg19 archived low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample, missing derived_from ENCFF002CWJ bed narrowPeak optimal idr thresholded peaks ENCSR000EGC ChIP-seq EFO:0002067 K562 cell line Homo sapiens RCOR1-human ENCAB000AFJ DNA see document see document False 2012-05-14 ENCODE 157869 ENCODE Consortium Analysis Working Group 00c00dfe8c61c384b777f1d95c60fc29 https://www.encodeproject.org/files/ENCFF002CWJ/@@download/ENCFF002CWJ.bed.gz hg19 archived low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample, missing derived_from ENCFF000YLF fastq reads ENCSR000EGC ChIP-seq EFO:0002067 K562 cell line Homo sapiens RCOR1-human ENCAB000AFJ DNA see document see document False 2012-05-14 ENCODE 1 1 36 single-ended 500203230 Michael Snyder, Stanford 1fb07ac250e12878927439d84e32ca35 https://www.encodeproject.org/files/ENCFF000YLF/@@download/ENCFF000YLF.fastq.gz Illumina Genome Analyzer /files/ENCFF000YRB/ released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF761MFF bigBed narrowPeak optimal idr thresholded peaks ENCSR000EGC ChIP-seq EFO:0002067 K562 cell line Homo sapiens RCOR1-human ENCAB000AFJ DNA see document see document False 2012-05-14 ENCODE ENCFF002CWJ 420251 ENCODE Consortium 3576668f072c369c979522ad101c1d65 https://www.encodeproject.org/files/ENCFF761MFF/@@download/ENCFF761MFF.bigBed hg19 archived low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF694BOP bam unfiltered alignments ENCSR000EGC ChIP-seq EFO:0002067 K562 cell line Homo sapiens RCOR1-human ENCAB000AFJ DNA see document see document False 2012-05-14 ENCODE 2 36 ENCFF000YLH, ENCFF643CGH 1330119239 ENCODE Processing Pipeline d088c5f170c8788630de0d514ed130a5 https://www.encodeproject.org/files/ENCFF694BOP/@@download/ENCFF694BOP.bam GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF112DFJ bam alignments ENCSR000EGC ChIP-seq EFO:0002067 K562 cell line Homo sapiens RCOR1-human ENCAB000AFJ DNA see document see document False 2012-05-14 ENCODE 2 36 ENCFF000YLH, ENCFF643CGH 945456611 ENCODE Processing Pipeline 61979b286d4a7e924d1ec25d2e8da580 https://www.encodeproject.org/files/ENCFF112DFJ/@@download/ENCFF112DFJ.bam GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF796EJK bam unfiltered alignments ENCSR000EGC ChIP-seq EFO:0002067 K562 cell line Homo sapiens RCOR1-human ENCAB000AFJ DNA see document see document False 2012-05-14 ENCODE 1 36 ENCFF000YLC, ENCFF000YLF, ENCFF643CGH 1009944891 ENCODE Processing Pipeline daff5fce77f02f6e8a0575cf0c832cc4 https://www.encodeproject.org/files/ENCFF796EJK/@@download/ENCFF796EJK.bam GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF623TAD bam alignments ENCSR000EGC ChIP-seq EFO:0002067 K562 cell line Homo sapiens RCOR1-human ENCAB000AFJ DNA see document see document False 2012-05-14 ENCODE 1 36 ENCFF000YLC, ENCFF000YLF, ENCFF643CGH 663638354 ENCODE Processing Pipeline 86841906a22861ba7da51f783a450c55 https://www.encodeproject.org/files/ENCFF623TAD/@@download/ENCFF623TAD.bam GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF074CIT bam alignments ENCSR000EGC ChIP-seq EFO:0002067 K562 cell line Homo sapiens RCOR1-human ENCAB000AFJ DNA see document see document False 2012-05-14 ENCODE 2 36 ENCFF000YLH, ENCFF807MUK 946050222 ENCODE Processing Pipeline 12b645184f9adeff5b845ff3bc3ad101 https://www.encodeproject.org/files/ENCFF074CIT/@@download/ENCFF074CIT.bam hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF918NIR bam unfiltered alignments ENCSR000EGC ChIP-seq EFO:0002067 K562 cell line Homo sapiens RCOR1-human ENCAB000AFJ DNA see document see document False 2012-05-14 ENCODE 2 36 ENCFF000YLH, ENCFF807MUK 1324324830 ENCODE Processing Pipeline 20db2255b81dba7962f0191d46e0e387 https://www.encodeproject.org/files/ENCFF918NIR/@@download/ENCFF918NIR.bam hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF899INX bam unfiltered alignments ENCSR000EGC ChIP-seq EFO:0002067 K562 cell line Homo sapiens RCOR1-human ENCAB000AFJ DNA see document see document False 2012-05-14 ENCODE 1 36 ENCFF000YLC, ENCFF000YLF, ENCFF807MUK 1005642238 ENCODE Processing Pipeline 18b1d860694ed44c55691f0b09481bf3 https://www.encodeproject.org/files/ENCFF899INX/@@download/ENCFF899INX.bam hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF072HKU bam alignments ENCSR000EGC ChIP-seq EFO:0002067 K562 cell line Homo sapiens RCOR1-human ENCAB000AFJ DNA see document see document False 2012-05-14 ENCODE 1 36 ENCFF000YLC, ENCFF000YLF, ENCFF807MUK 664081610 ENCODE Processing Pipeline d0a1056f3968d4f8ac796a8c8de378e9 https://www.encodeproject.org/files/ENCFF072HKU/@@download/ENCFF072HKU.bam hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF614PTK bigWig signal p-value ENCSR000EGC ChIP-seq EFO:0002067 K562 cell line Homo sapiens RCOR1-human ENCAB000AFJ DNA see document see document False 2012-05-14 ENCODE 1 ENCFF023NGN, ENCFF623TAD 469835078 ENCODE Processing Pipeline 2454031c6ce7daa4c1640ed9c92a9c54 https://www.encodeproject.org/files/ENCFF614PTK/@@download/ENCFF614PTK.bigWig GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF925UER bigWig signal p-value ENCSR000EGC ChIP-seq EFO:0002067 K562 cell line Homo sapiens RCOR1-human ENCAB000AFJ DNA see document see document False 2012-05-14 ENCODE 2 ENCFF023NGN, ENCFF112DFJ 511160066 ENCODE Processing Pipeline 4ecb5efb7f54c29499eb858a56a7d26f https://www.encodeproject.org/files/ENCFF925UER/@@download/ENCFF925UER.bigWig GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF781QSL bigWig signal p-value ENCSR000EGC ChIP-seq EFO:0002067 K562 cell line Homo sapiens RCOR1-human ENCAB000AFJ DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF023NGN, ENCFF112DFJ, ENCFF623TAD 554596312 ENCODE Processing Pipeline 0d5c164ef2a1ec56f7b0cd7f0c567f57 https://www.encodeproject.org/files/ENCFF781QSL/@@download/ENCFF781QSL.bigWig GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF033QIR bigWig fold change over control ENCSR000EGC ChIP-seq EFO:0002067 K562 cell line Homo sapiens RCOR1-human ENCAB000AFJ DNA see document see document False 2012-05-14 ENCODE 1 ENCFF023NGN, ENCFF623TAD 343610516 ENCODE Processing Pipeline 9eed16d3cd62c53b15fe9f9b78201902 https://www.encodeproject.org/files/ENCFF033QIR/@@download/ENCFF033QIR.bigWig GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF976DAC bigWig fold change over control ENCSR000EGC ChIP-seq EFO:0002067 K562 cell line Homo sapiens RCOR1-human ENCAB000AFJ DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF023NGN, ENCFF112DFJ, ENCFF623TAD 687270901 ENCODE Processing Pipeline 69c3680005a2137b849fc4eaeafc6338 https://www.encodeproject.org/files/ENCFF976DAC/@@download/ENCFF976DAC.bigWig GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF917EAJ bed narrowPeak peaks ENCSR000EGC ChIP-seq EFO:0002067 K562 cell line Homo sapiens RCOR1-human ENCAB000AFJ DNA see document see document False 2012-05-14 ENCODE 1 ENCFF023NGN, ENCFF623TAD 5045652 ENCODE Processing Pipeline e017ddfe84d8fd0eaaa29d0314c9613a https://www.encodeproject.org/files/ENCFF917EAJ/@@download/ENCFF917EAJ.bed.gz GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF527JDM bigWig fold change over control ENCSR000EGC ChIP-seq EFO:0002067 K562 cell line Homo sapiens RCOR1-human ENCAB000AFJ DNA see document see document False 2012-05-14 ENCODE 2 ENCFF023NGN, ENCFF112DFJ 475049208 ENCODE Processing Pipeline 2fa75fcafe8a031f85bfb60c2a934a2d https://www.encodeproject.org/files/ENCFF527JDM/@@download/ENCFF527JDM.bigWig GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF470SPH bed narrowPeak peaks ENCSR000EGC ChIP-seq EFO:0002067 K562 cell line Homo sapiens RCOR1-human ENCAB000AFJ DNA see document see document False 2012-05-14 ENCODE 2 ENCFF023NGN, ENCFF112DFJ 5349337 ENCODE Processing Pipeline de0b92c1aa9873187b949f6bd88eaa19 https://www.encodeproject.org/files/ENCFF470SPH/@@download/ENCFF470SPH.bed.gz GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF234JEE bigBed narrowPeak peaks ENCSR000EGC ChIP-seq EFO:0002067 K562 cell line Homo sapiens RCOR1-human ENCAB000AFJ DNA see document see document False 2012-05-14 ENCODE 2 ENCFF470SPH 13247545 ENCODE Processing Pipeline 64dd78f16dcf47467d078f42e7fee55b https://www.encodeproject.org/files/ENCFF234JEE/@@download/ENCFF234JEE.bigBed GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF389ISM bed narrowPeak peaks ENCSR000EGC ChIP-seq EFO:0002067 K562 cell line Homo sapiens RCOR1-human ENCAB000AFJ DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF023NGN, ENCFF112DFJ, ENCFF623TAD 2757610 ENCODE Processing Pipeline e18493416146daae1fe90e2c072441d0 https://www.encodeproject.org/files/ENCFF389ISM/@@download/ENCFF389ISM.bed.gz GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF170JJV bed narrowPeak conservative idr thresholded peaks ENCSR000EGC ChIP-seq EFO:0002067 K562 cell line Homo sapiens RCOR1-human ENCAB000AFJ DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF389ISM, ENCFF419RSJ, ENCFF470SPH, ENCFF917EAJ 90756 ENCODE Processing Pipeline d4e3a50fecac54e9dc9f159b71b4e656 https://www.encodeproject.org/files/ENCFF170JJV/@@download/ENCFF170JJV.bed.gz GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF985NRC bigBed narrowPeak optimal idr thresholded peaks ENCSR000EGC ChIP-seq EFO:0002067 K562 cell line Homo sapiens RCOR1-human ENCAB000AFJ DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF968SUH 275778 ENCODE Processing Pipeline 7696c1922ce8ec87c0e9293b24ad8709 https://www.encodeproject.org/files/ENCFF985NRC/@@download/ENCFF985NRC.bigBed GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF609HGE bigBed narrowPeak peaks ENCSR000EGC ChIP-seq EFO:0002067 K562 cell line Homo sapiens RCOR1-human ENCAB000AFJ DNA see document see document False 2012-05-14 ENCODE 1 ENCFF917EAJ 10795248 ENCODE Processing Pipeline abbe4bb0623c34b345a3f42a95b366f2 https://www.encodeproject.org/files/ENCFF609HGE/@@download/ENCFF609HGE.bigBed GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF339APP bigBed narrowPeak peaks ENCSR000EGC ChIP-seq EFO:0002067 K562 cell line Homo sapiens RCOR1-human ENCAB000AFJ DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF389ISM 5759796 ENCODE Processing Pipeline 3b1400efdfd2205605da14a915ae8e76 https://www.encodeproject.org/files/ENCFF339APP/@@download/ENCFF339APP.bigBed GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF815YWU bigBed narrowPeak conservative idr thresholded peaks ENCSR000EGC ChIP-seq EFO:0002067 K562 cell line Homo sapiens RCOR1-human ENCAB000AFJ DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF170JJV 226609 ENCODE Processing Pipeline a6ed40f36e9e601a12b71e6566230e53 https://www.encodeproject.org/files/ENCFF815YWU/@@download/ENCFF815YWU.bigBed GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF968SUH bed narrowPeak optimal idr thresholded peaks ENCSR000EGC ChIP-seq EFO:0002067 K562 cell line Homo sapiens RCOR1-human ENCAB000AFJ DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF389ISM, ENCFF419RSJ, ENCFF470SPH, ENCFF917EAJ 123152 ENCODE Processing Pipeline 1481dcd0e4051afd7bbabee2758f0e75 https://www.encodeproject.org/files/ENCFF968SUH/@@download/ENCFF968SUH.bed.gz GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF368WWT bigWig signal p-value ENCSR000EGC ChIP-seq EFO:0002067 K562 cell line Homo sapiens RCOR1-human ENCAB000AFJ DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF072HKU, ENCFF074CIT, ENCFF710NTS 554873400 ENCODE Processing Pipeline 0b352a7b246179b9634eeb3378a6a125 https://www.encodeproject.org/files/ENCFF368WWT/@@download/ENCFF368WWT.bigWig hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF454YNC bigBed narrowPeak peaks ENCSR000EGC ChIP-seq EFO:0002067 K562 cell line Homo sapiens RCOR1-human ENCAB000AFJ DNA see document see document False 2012-05-14 ENCODE 1 ENCFF959MXK 10790842 ENCODE Processing Pipeline 206db74fc38efafc4ce4f60270eadde2 https://www.encodeproject.org/files/ENCFF454YNC/@@download/ENCFF454YNC.bigBed hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF484CKD bed narrowPeak optimal idr thresholded peaks ENCSR000EGC ChIP-seq EFO:0002067 K562 cell line Homo sapiens RCOR1-human ENCAB000AFJ DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF001TDO, ENCFF477PXF, ENCFF620JKI, ENCFF959MXK 122282 ENCODE Processing Pipeline d8f4094f757d447fef0084be8473dbd0 https://www.encodeproject.org/files/ENCFF484CKD/@@download/ENCFF484CKD.bed.gz hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF477PXF bed narrowPeak peaks ENCSR000EGC ChIP-seq EFO:0002067 K562 cell line Homo sapiens RCOR1-human ENCAB000AFJ DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF072HKU, ENCFF074CIT, ENCFF710NTS 2763528 ENCODE Processing Pipeline 3998d6006256ccd165ab9adacd19d4d3 https://www.encodeproject.org/files/ENCFF477PXF/@@download/ENCFF477PXF.bed.gz hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF054TMM bigBed narrowPeak conservative idr thresholded peaks ENCSR000EGC ChIP-seq EFO:0002067 K562 cell line Homo sapiens RCOR1-human ENCAB000AFJ DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF796XFQ 223940 ENCODE Processing Pipeline b749b5e9b137a6f82271acca91c43745 https://www.encodeproject.org/files/ENCFF054TMM/@@download/ENCFF054TMM.bigBed hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF744ZLX bigWig signal p-value ENCSR000EGC ChIP-seq EFO:0002067 K562 cell line Homo sapiens RCOR1-human ENCAB000AFJ DNA see document see document False 2012-05-14 ENCODE 1 ENCFF072HKU, ENCFF710NTS 440145621 ENCODE Processing Pipeline 33aede4fd947525b6d111bb1751fc586 https://www.encodeproject.org/files/ENCFF744ZLX/@@download/ENCFF744ZLX.bigWig hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF595EMI bigWig fold change over control ENCSR000EGC ChIP-seq EFO:0002067 K562 cell line Homo sapiens RCOR1-human ENCAB000AFJ DNA see document see document False 2012-05-14 ENCODE 1 ENCFF072HKU, ENCFF710NTS 341883160 ENCODE Processing Pipeline c1fe31bd0b543bfb385de060882c22f8 https://www.encodeproject.org/files/ENCFF595EMI/@@download/ENCFF595EMI.bigWig hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF550TDY bigWig fold change over control ENCSR000EGC ChIP-seq EFO:0002067 K562 cell line Homo sapiens RCOR1-human ENCAB000AFJ DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF072HKU, ENCFF074CIT, ENCFF710NTS 688350167 ENCODE Processing Pipeline 99e077c8c2e5e9d2aca5e15860dd7323 https://www.encodeproject.org/files/ENCFF550TDY/@@download/ENCFF550TDY.bigWig hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF620JKI bed narrowPeak peaks ENCSR000EGC ChIP-seq EFO:0002067 K562 cell line Homo sapiens RCOR1-human ENCAB000AFJ DNA see document see document False 2012-05-14 ENCODE 2 ENCFF074CIT, ENCFF710NTS 5345789 ENCODE Processing Pipeline cc2c46c0e7f74d7af9a17d5c30f9b684 https://www.encodeproject.org/files/ENCFF620JKI/@@download/ENCFF620JKI.bed.gz hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF075ISL bigWig signal p-value ENCSR000EGC ChIP-seq EFO:0002067 K562 cell line Homo sapiens RCOR1-human ENCAB000AFJ DNA see document see document False 2012-05-14 ENCODE 2 ENCFF074CIT, ENCFF710NTS 502326183 ENCODE Processing Pipeline 85e4015f03292b20aff2a625ae564cf8 https://www.encodeproject.org/files/ENCFF075ISL/@@download/ENCFF075ISL.bigWig hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF214EHD bigBed narrowPeak peaks ENCSR000EGC ChIP-seq EFO:0002067 K562 cell line Homo sapiens RCOR1-human ENCAB000AFJ DNA see document see document False 2012-05-14 ENCODE 2 ENCFF620JKI 13223637 ENCODE Processing Pipeline c0aacfc7f3252bd9ccb28c86150b41b1 https://www.encodeproject.org/files/ENCFF214EHD/@@download/ENCFF214EHD.bigBed hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF796XFQ bed narrowPeak conservative idr thresholded peaks ENCSR000EGC ChIP-seq EFO:0002067 K562 cell line Homo sapiens RCOR1-human ENCAB000AFJ DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF001TDO, ENCFF477PXF, ENCFF620JKI, ENCFF959MXK 89380 ENCODE Processing Pipeline f612b1dc9f4e69557585e3fc2006316d https://www.encodeproject.org/files/ENCFF796XFQ/@@download/ENCFF796XFQ.bed.gz hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF920YXS bigBed narrowPeak optimal idr thresholded peaks ENCSR000EGC ChIP-seq EFO:0002067 K562 cell line Homo sapiens RCOR1-human ENCAB000AFJ DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF484CKD 273920 ENCODE Processing Pipeline 07ca33ab1a93797a74cbc2451f3c06d6 https://www.encodeproject.org/files/ENCFF920YXS/@@download/ENCFF920YXS.bigBed hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF280RJQ bigWig fold change over control ENCSR000EGC ChIP-seq EFO:0002067 K562 cell line Homo sapiens RCOR1-human ENCAB000AFJ DNA see document see document False 2012-05-14 ENCODE 2 ENCFF074CIT, ENCFF710NTS 475949168 ENCODE Processing Pipeline d37b63105a11d1067babfd4ec7cd4508 https://www.encodeproject.org/files/ENCFF280RJQ/@@download/ENCFF280RJQ.bigWig hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF959MXK bed narrowPeak peaks ENCSR000EGC ChIP-seq EFO:0002067 K562 cell line Homo sapiens RCOR1-human ENCAB000AFJ DNA see document see document False 2012-05-14 ENCODE 1 ENCFF072HKU, ENCFF710NTS 5051372 ENCODE Processing Pipeline 0ad30b28ec7b893683aa702b3ec92aab https://www.encodeproject.org/files/ENCFF959MXK/@@download/ENCFF959MXK.bed.gz hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF249SOZ bigBed narrowPeak peaks ENCSR000EGC ChIP-seq EFO:0002067 K562 cell line Homo sapiens RCOR1-human ENCAB000AFJ DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF477PXF 5754459 ENCODE Processing Pipeline 06db449b70c077f50b266dad04d188d4 https://www.encodeproject.org/files/ENCFF249SOZ/@@download/ENCFF249SOZ.bigBed hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF950AJU bam unfiltered alignments ENCSR948VFL ChIP-seq EFO:0002067 K562 cell line Homo sapiens IKZF1-human ENCAB590IRI DNA False 2016-10-11 ENCODE 1 100 ENCFF156ZUZ, ENCFF738CWY, ENCFF807MUK 6050518085 ENCODE Processing Pipeline 923ec029ef64bc19b8466d9ce2491cb8 https://www.encodeproject.org/files/ENCFF950AJU/@@download/ENCFF950AJU.bam hg19 released ENCFF791WUT bam unfiltered alignments ENCSR948VFL ChIP-seq EFO:0002067 K562 cell line Homo sapiens IKZF1-human ENCAB590IRI DNA False 2016-10-11 ENCODE 2 100 ENCFF245IWG, ENCFF807MUK, ENCFF936LDI 5618509576 ENCODE Processing Pipeline aea8a4757c019cff1730aca9c9511365 https://www.encodeproject.org/files/ENCFF791WUT/@@download/ENCFF791WUT.bam hg19 released ENCFF738CWY fastq reads ENCSR948VFL ChIP-seq EFO:0002067 K562 cell line Homo sapiens IKZF1-human ENCAB590IRI DNA False 2016-10-11 ENCODE 1 1 100 paired-ended 2 ENCFF156ZUZ 2827658762 Michael Snyder, Stanford 01744537d7c93de247c69af06d2e871a SRA:SRR5112376 https://www.encodeproject.org/files/ENCFF738CWY/@@download/ENCFF738CWY.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFH/ released ENCFF156ZUZ fastq reads ENCSR948VFL ChIP-seq EFO:0002067 K562 cell line Homo sapiens IKZF1-human ENCAB590IRI DNA False 2016-10-11 ENCODE 1 1 100 paired-ended 1 ENCFF738CWY 2792492278 Michael Snyder, Stanford c69dddcc596186f50bfa2b9391c0865a SRA:SRR5112376 https://www.encodeproject.org/files/ENCFF156ZUZ/@@download/ENCFF156ZUZ.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFF/ released ENCFF245IWG fastq reads ENCSR948VFL ChIP-seq EFO:0002067 K562 cell line Homo sapiens IKZF1-human ENCAB590IRI DNA False 2016-10-11 ENCODE 2 1 100 paired-ended 2 ENCFF936LDI 2633279556 Michael Snyder, Stanford abc83f9791f5a7de9c68c8895f27ab0c SRA:SRR5112377 https://www.encodeproject.org/files/ENCFF245IWG/@@download/ENCFF245IWG.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFA/ released ENCFF936LDI fastq reads ENCSR948VFL ChIP-seq EFO:0002067 K562 cell line Homo sapiens IKZF1-human ENCAB590IRI DNA False 2016-10-11 ENCODE 2 1 100 paired-ended 1 ENCFF245IWG 2600485994 Michael Snyder, Stanford 4d410388bfa8d663da93854f52f7f91d SRA:SRR5112377 https://www.encodeproject.org/files/ENCFF936LDI/@@download/ENCFF936LDI.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFD/ released ENCFF777WTJ bam alignments ENCSR948VFL ChIP-seq EFO:0002067 K562 cell line Homo sapiens IKZF1-human ENCAB590IRI DNA False 2016-10-11 ENCODE 2 100 ENCFF245IWG, ENCFF807MUK, ENCFF936LDI 4719294160 ENCODE Processing Pipeline 740b648878c780dd1513e1e3acac4251 https://www.encodeproject.org/files/ENCFF777WTJ/@@download/ENCFF777WTJ.bam hg19 released ENCFF561GSY bam alignments ENCSR948VFL ChIP-seq EFO:0002067 K562 cell line Homo sapiens IKZF1-human ENCAB590IRI DNA False 2016-10-11 ENCODE 1 100 ENCFF156ZUZ, ENCFF738CWY, ENCFF807MUK 5115111229 ENCODE Processing Pipeline 6df891433469722061588ac80d2ad030 https://www.encodeproject.org/files/ENCFF561GSY/@@download/ENCFF561GSY.bam hg19 released ENCFF938BKY bigWig signal p-value ENCSR948VFL ChIP-seq EFO:0002067 K562 cell line Homo sapiens IKZF1-human ENCAB590IRI DNA False 2016-10-11 ENCODE 1 ENCFF561GSY, ENCFF581ZJL 1105336266 ENCODE Processing Pipeline b136c69b73f6eef5a665b55c78e641ce https://www.encodeproject.org/files/ENCFF938BKY/@@download/ENCFF938BKY.bigWig hg19 released ENCFF666AOJ bigWig signal p-value ENCSR948VFL ChIP-seq EFO:0002067 K562 cell line Homo sapiens IKZF1-human ENCAB590IRI DNA False 2016-10-11 ENCODE 2 ENCFF051LWI, ENCFF777WTJ 1015489867 ENCODE Processing Pipeline 02c90d7109ee3262e8d1741b2b4becb7 https://www.encodeproject.org/files/ENCFF666AOJ/@@download/ENCFF666AOJ.bigWig hg19 released ENCFF995KTX bigWig signal p-value ENCSR948VFL ChIP-seq EFO:0002067 K562 cell line Homo sapiens IKZF1-human ENCAB590IRI DNA False 2016-10-11 ENCODE 1, 2 ENCFF051LWI, ENCFF561GSY, ENCFF581ZJL, ENCFF777WTJ 1892288441 ENCODE Processing Pipeline be63c5e9b20101263929e816a31ae7cc https://www.encodeproject.org/files/ENCFF995KTX/@@download/ENCFF995KTX.bigWig hg19 released ENCFF255XPV bigWig fold change over control ENCSR948VFL ChIP-seq EFO:0002067 K562 cell line Homo sapiens IKZF1-human ENCAB590IRI DNA False 2016-10-11 ENCODE 1 ENCFF561GSY, ENCFF581ZJL 1299881859 ENCODE Processing Pipeline 09d308409fd4dbe983521f349f19598b https://www.encodeproject.org/files/ENCFF255XPV/@@download/ENCFF255XPV.bigWig hg19 released ENCFF910PLM bigWig fold change over control ENCSR948VFL ChIP-seq EFO:0002067 K562 cell line Homo sapiens IKZF1-human ENCAB590IRI DNA False 2016-10-11 ENCODE 2 ENCFF051LWI, ENCFF777WTJ 1146995421 ENCODE Processing Pipeline aa79c7981db99d7fd1c31993b67a8966 https://www.encodeproject.org/files/ENCFF910PLM/@@download/ENCFF910PLM.bigWig hg19 released ENCFF715OCK bigWig fold change over control ENCSR948VFL ChIP-seq EFO:0002067 K562 cell line Homo sapiens IKZF1-human ENCAB590IRI DNA False 2016-10-11 ENCODE 1, 2 ENCFF051LWI, ENCFF561GSY, ENCFF581ZJL, ENCFF777WTJ 2196544317 ENCODE Processing Pipeline 46e4b962b001a3b71d313e82605fe6c5 https://www.encodeproject.org/files/ENCFF715OCK/@@download/ENCFF715OCK.bigWig hg19 released ENCFF165OLG bed narrowPeak peaks ENCSR948VFL ChIP-seq EFO:0002067 K562 cell line Homo sapiens IKZF1-human ENCAB590IRI DNA False 2016-10-11 ENCODE 1 ENCFF561GSY, ENCFF581ZJL 7194804 ENCODE Processing Pipeline 3ee7173d67a0ae3c64c577669ba2e544 https://www.encodeproject.org/files/ENCFF165OLG/@@download/ENCFF165OLG.bed.gz hg19 released ENCFF320JKZ bed narrowPeak peaks ENCSR948VFL ChIP-seq EFO:0002067 K562 cell line Homo sapiens IKZF1-human ENCAB590IRI DNA False 2016-10-11 ENCODE 2 ENCFF051LWI, ENCFF777WTJ 7163528 ENCODE Processing Pipeline abde4ca054c2bc93c58be11b81372073 https://www.encodeproject.org/files/ENCFF320JKZ/@@download/ENCFF320JKZ.bed.gz hg19 released ENCFF519QZC bed narrowPeak peaks ENCSR948VFL ChIP-seq EFO:0002067 K562 cell line Homo sapiens IKZF1-human ENCAB590IRI DNA False 2016-10-11 ENCODE 1, 2 ENCFF051LWI, ENCFF561GSY, ENCFF581ZJL, ENCFF777WTJ 7143401 ENCODE Processing Pipeline b28be6209e576830c06ae1bea8a3ed77 https://www.encodeproject.org/files/ENCFF519QZC/@@download/ENCFF519QZC.bed.gz hg19 released ENCFF901AIL bigBed narrowPeak peaks ENCSR948VFL ChIP-seq EFO:0002067 K562 cell line Homo sapiens IKZF1-human ENCAB590IRI DNA False 2016-10-11 ENCODE 1 ENCFF165OLG 12932855 ENCODE Processing Pipeline 3806e13b73ca204d73232e3c797d2cc2 https://www.encodeproject.org/files/ENCFF901AIL/@@download/ENCFF901AIL.bigBed hg19 released ENCFF230ZWS bigBed narrowPeak peaks ENCSR948VFL ChIP-seq EFO:0002067 K562 cell line Homo sapiens IKZF1-human ENCAB590IRI DNA False 2016-10-11 ENCODE 1, 2 ENCFF519QZC 12811670 ENCODE Processing Pipeline 8e6ca00fd9a6d90110420eb736ada868 https://www.encodeproject.org/files/ENCFF230ZWS/@@download/ENCFF230ZWS.bigBed hg19 released ENCFF998CUC bigBed narrowPeak peaks ENCSR948VFL ChIP-seq EFO:0002067 K562 cell line Homo sapiens IKZF1-human ENCAB590IRI DNA False 2016-10-11 ENCODE 2 ENCFF320JKZ 13014549 ENCODE Processing Pipeline be2cca2fc51b64dfc223cb287c6304e4 https://www.encodeproject.org/files/ENCFF998CUC/@@download/ENCFF998CUC.bigBed hg19 released ENCFF766NVP bed narrowPeak conservative idr thresholded peaks ENCSR948VFL ChIP-seq EFO:0002067 K562 cell line Homo sapiens IKZF1-human ENCAB590IRI DNA False 2016-10-11 ENCODE 1, 2 ENCFF001TDO, ENCFF165OLG, ENCFF320JKZ, ENCFF519QZC 758293 ENCODE Processing Pipeline 544fd964a347a9bea2097f2a3602f350 https://www.encodeproject.org/files/ENCFF766NVP/@@download/ENCFF766NVP.bed.gz hg19 released ENCFF802SZP bigBed narrowPeak conservative idr thresholded peaks ENCSR948VFL ChIP-seq EFO:0002067 K562 cell line Homo sapiens IKZF1-human ENCAB590IRI DNA False 2016-10-11 ENCODE 1, 2 ENCFF766NVP 1714663 ENCODE Processing Pipeline deb9bf1b674cf4169ba8e855bd337bb5 https://www.encodeproject.org/files/ENCFF802SZP/@@download/ENCFF802SZP.bigBed hg19 released ENCFF886VSU bed narrowPeak optimal idr thresholded peaks ENCSR948VFL ChIP-seq EFO:0002067 K562 cell line Homo sapiens IKZF1-human ENCAB590IRI DNA False 2016-10-11 ENCODE 1, 2 ENCFF001TDO, ENCFF165OLG, ENCFF320JKZ, ENCFF519QZC 870116 ENCODE Processing Pipeline 75a920f51d6077f2f65ffc7fadadfe2e https://www.encodeproject.org/files/ENCFF886VSU/@@download/ENCFF886VSU.bed.gz hg19 released ENCFF486YIL bigBed narrowPeak optimal idr thresholded peaks ENCSR948VFL ChIP-seq EFO:0002067 K562 cell line Homo sapiens IKZF1-human ENCAB590IRI DNA False 2016-10-11 ENCODE 1, 2 ENCFF886VSU 1919377 ENCODE Processing Pipeline f7c9283424c2657146e70bc0254a981b https://www.encodeproject.org/files/ENCFF486YIL/@@download/ENCFF486YIL.bigBed hg19 released ENCFF818AVS bam unfiltered alignments ENCSR948VFL ChIP-seq EFO:0002067 K562 cell line Homo sapiens IKZF1-human ENCAB590IRI DNA False 2016-10-11 ENCODE 2 100 ENCFF245IWG, ENCFF643CGH, ENCFF936LDI 5622708566 ENCODE Processing Pipeline 1c73f6b993b6dc5cd4782553c31211b0 https://www.encodeproject.org/files/ENCFF818AVS/@@download/ENCFF818AVS.bam GRCh38 released ENCFF693BGB bam unfiltered alignments ENCSR948VFL ChIP-seq EFO:0002067 K562 cell line Homo sapiens IKZF1-human ENCAB590IRI DNA False 2016-10-11 ENCODE 1 100 ENCFF156ZUZ, ENCFF643CGH, ENCFF738CWY 6056186829 ENCODE Processing Pipeline 50cbf8015aa57efa2a9e6c977f292e5e https://www.encodeproject.org/files/ENCFF693BGB/@@download/ENCFF693BGB.bam GRCh38 released ENCFF016KRJ bam alignments ENCSR948VFL ChIP-seq EFO:0002067 K562 cell line Homo sapiens IKZF1-human ENCAB590IRI DNA False 2016-10-11 ENCODE 2 100 ENCFF245IWG, ENCFF643CGH, ENCFF936LDI 4724238592 ENCODE Processing Pipeline f8697a3f8718ebb15e9d8f2231f2e9ae https://www.encodeproject.org/files/ENCFF016KRJ/@@download/ENCFF016KRJ.bam GRCh38 released ENCFF880SVB bam alignments ENCSR948VFL ChIP-seq EFO:0002067 K562 cell line Homo sapiens IKZF1-human ENCAB590IRI DNA False 2016-10-11 ENCODE 1 100 ENCFF156ZUZ, ENCFF643CGH, ENCFF738CWY 5121163613 ENCODE Processing Pipeline e2dac7da1d99ca5560778b56c01c5c89 https://www.encodeproject.org/files/ENCFF880SVB/@@download/ENCFF880SVB.bam GRCh38 released ENCFF645OOV bigWig signal p-value ENCSR948VFL ChIP-seq EFO:0002067 K562 cell line Homo sapiens IKZF1-human ENCAB590IRI DNA False 2016-10-11 ENCODE 1 ENCFF880SVB, ENCFF910IKB 1300828033 ENCODE Processing Pipeline 3cb603138dfab6783bcd60045eaaac31 https://www.encodeproject.org/files/ENCFF645OOV/@@download/ENCFF645OOV.bigWig GRCh38 released ENCFF218DSZ bigWig signal p-value ENCSR948VFL ChIP-seq EFO:0002067 K562 cell line Homo sapiens IKZF1-human ENCAB590IRI DNA False 2016-10-11 ENCODE 2 ENCFF016KRJ, ENCFF227IZS 1133976728 ENCODE Processing Pipeline 8123b522bbfc239057d8f321773b619a https://www.encodeproject.org/files/ENCFF218DSZ/@@download/ENCFF218DSZ.bigWig GRCh38 released ENCFF194IPJ bigWig signal p-value ENCSR948VFL ChIP-seq EFO:0002067 K562 cell line Homo sapiens IKZF1-human ENCAB590IRI DNA False 2016-10-11 ENCODE 1, 2 ENCFF016KRJ, ENCFF227IZS, ENCFF880SVB, ENCFF910IKB 1743794093 ENCODE Processing Pipeline c7d90404826fb8dd8c39e09eeae8aa03 https://www.encodeproject.org/files/ENCFF194IPJ/@@download/ENCFF194IPJ.bigWig GRCh38 released ENCFF056CQY bigWig fold change over control ENCSR948VFL ChIP-seq EFO:0002067 K562 cell line Homo sapiens IKZF1-human ENCAB590IRI DNA False 2016-10-11 ENCODE 1 ENCFF880SVB, ENCFF910IKB 1291104295 ENCODE Processing Pipeline 4ecd8173c32fb9f4c9c79a263f6addfa https://www.encodeproject.org/files/ENCFF056CQY/@@download/ENCFF056CQY.bigWig GRCh38 released ENCFF027GZW bigWig fold change over control ENCSR948VFL ChIP-seq EFO:0002067 K562 cell line Homo sapiens IKZF1-human ENCAB590IRI DNA False 2016-10-11 ENCODE 2 ENCFF016KRJ, ENCFF227IZS 1146888103 ENCODE Processing Pipeline 67b8b72d7afb683a8d8284c9564477c9 https://www.encodeproject.org/files/ENCFF027GZW/@@download/ENCFF027GZW.bigWig GRCh38 released ENCFF741DZJ bigWig fold change over control ENCSR948VFL ChIP-seq EFO:0002067 K562 cell line Homo sapiens IKZF1-human ENCAB590IRI DNA False 2016-10-11 ENCODE 1, 2 ENCFF016KRJ, ENCFF227IZS, ENCFF880SVB, ENCFF910IKB 2151923983 ENCODE Processing Pipeline 97eda91fe911bbfc32d79c11f5dc72bd https://www.encodeproject.org/files/ENCFF741DZJ/@@download/ENCFF741DZJ.bigWig GRCh38 released ENCFF094JFK bed narrowPeak peaks ENCSR948VFL ChIP-seq EFO:0002067 K562 cell line Homo sapiens IKZF1-human ENCAB590IRI DNA False 2016-10-11 ENCODE 2 ENCFF016KRJ, ENCFF227IZS 7032330 ENCODE Processing Pipeline 9a29279856a44890c37faf2473456c0d https://www.encodeproject.org/files/ENCFF094JFK/@@download/ENCFF094JFK.bed.gz GRCh38 released ENCFF164XFI bigBed narrowPeak peaks ENCSR948VFL ChIP-seq EFO:0002067 K562 cell line Homo sapiens IKZF1-human ENCAB590IRI DNA False 2016-10-11 ENCODE 2 ENCFF094JFK 12913212 ENCODE Processing Pipeline bd085bcced2121126eccf7e385906eb2 https://www.encodeproject.org/files/ENCFF164XFI/@@download/ENCFF164XFI.bigBed GRCh38 released ENCFF674ELX bed narrowPeak peaks ENCSR948VFL ChIP-seq EFO:0002067 K562 cell line Homo sapiens IKZF1-human ENCAB590IRI DNA False 2016-10-11 ENCODE 1 ENCFF880SVB, ENCFF910IKB 7142588 ENCODE Processing Pipeline 8edc8dd336c1d89969c7bb7a9406cd57 https://www.encodeproject.org/files/ENCFF674ELX/@@download/ENCFF674ELX.bed.gz GRCh38 released ENCFF004CAC bed narrowPeak peaks ENCSR948VFL ChIP-seq EFO:0002067 K562 cell line Homo sapiens IKZF1-human ENCAB590IRI DNA False 2016-10-11 ENCODE 1, 2 ENCFF016KRJ, ENCFF227IZS, ENCFF880SVB, ENCFF910IKB 7139471 ENCODE Processing Pipeline e0c6ae7d13bd527fcf7f1ff344362747 https://www.encodeproject.org/files/ENCFF004CAC/@@download/ENCFF004CAC.bed.gz GRCh38 released ENCFF601TEI bigBed narrowPeak peaks ENCSR948VFL ChIP-seq EFO:0002067 K562 cell line Homo sapiens IKZF1-human ENCAB590IRI DNA False 2016-10-11 ENCODE 1 ENCFF674ELX 12900647 ENCODE Processing Pipeline b1930914225e4a6397ab9d43331fa4f5 https://www.encodeproject.org/files/ENCFF601TEI/@@download/ENCFF601TEI.bigBed GRCh38 released ENCFF619ZVX bigBed narrowPeak conservative idr thresholded peaks ENCSR948VFL ChIP-seq EFO:0002067 K562 cell line Homo sapiens IKZF1-human ENCAB590IRI DNA False 2016-10-11 ENCODE 1, 2 ENCFF589RYN 1715421 ENCODE Processing Pipeline 51041bf46e3b0d645132f26ab75f06c9 https://www.encodeproject.org/files/ENCFF619ZVX/@@download/ENCFF619ZVX.bigBed GRCh38 released ENCFF927BOI bigBed narrowPeak peaks ENCSR948VFL ChIP-seq EFO:0002067 K562 cell line Homo sapiens IKZF1-human ENCAB590IRI DNA False 2016-10-11 ENCODE 1, 2 ENCFF004CAC 12814005 ENCODE Processing Pipeline 8d7467c71f4da48bbb9eec94276ff0a0 https://www.encodeproject.org/files/ENCFF927BOI/@@download/ENCFF927BOI.bigBed GRCh38 released ENCFF589RYN bed narrowPeak conservative idr thresholded peaks ENCSR948VFL ChIP-seq EFO:0002067 K562 cell line Homo sapiens IKZF1-human ENCAB590IRI DNA False 2016-10-11 ENCODE 1, 2 ENCFF004CAC, ENCFF094JFK, ENCFF419RSJ, ENCFF674ELX 756706 ENCODE Processing Pipeline 998f12640990aa5f14f31b18b05e58d8 https://www.encodeproject.org/files/ENCFF589RYN/@@download/ENCFF589RYN.bed.gz GRCh38 released ENCFF259GZX bigBed narrowPeak optimal idr thresholded peaks ENCSR948VFL ChIP-seq EFO:0002067 K562 cell line Homo sapiens IKZF1-human ENCAB590IRI DNA False 2016-10-11 ENCODE 1, 2 ENCFF785BTP 1923409 ENCODE Processing Pipeline 2c53faeb2f643f77643061f108c20578 https://www.encodeproject.org/files/ENCFF259GZX/@@download/ENCFF259GZX.bigBed GRCh38 released ENCFF785BTP bed narrowPeak optimal idr thresholded peaks ENCSR948VFL ChIP-seq EFO:0002067 K562 cell line Homo sapiens IKZF1-human ENCAB590IRI DNA False 2016-10-11 ENCODE 1, 2 ENCFF004CAC, ENCFF094JFK, ENCFF419RSJ, ENCFF674ELX 869837 ENCODE Processing Pipeline 858e8076f6d72cab574d40906762dc53 https://www.encodeproject.org/files/ENCFF785BTP/@@download/ENCFF785BTP.bed.gz GRCh38 released ENCFF235PXN bam unfiltered alignments ENCSR343IFJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CC2D1A-human ENCAB451DRR DNA False 2017-06-29 ENCODE 2 100 ENCFF134VGP, ENCFF160TXM, ENCFF807MUK 5945984642 ENCODE Processing Pipeline 440d9e368c1cfeab95357a23b9fc4e63 https://www.encodeproject.org/files/ENCFF235PXN/@@download/ENCFF235PXN.bam hg19 released mild to moderate bottlenecking ENCFF054TBR bam unfiltered alignments ENCSR343IFJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CC2D1A-human ENCAB451DRR DNA False 2017-06-29 ENCODE 1 100 ENCFF197ETF, ENCFF608EHV, ENCFF807MUK 5217098296 ENCODE Processing Pipeline d8a382f70a3e8ca6e0256894d58d11c2 https://www.encodeproject.org/files/ENCFF054TBR/@@download/ENCFF054TBR.bam hg19 released mild to moderate bottlenecking ENCFF608EHV fastq reads ENCSR343IFJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CC2D1A-human ENCAB451DRR DNA False 2017-06-29 ENCODE 1 1 100 paired-ended 1 ENCFF197ETF 2422597180 Michael Snyder, Stanford d03f9dabaab988f5f5ef4bcead87b264 SRA:SRR6213386 https://www.encodeproject.org/files/ENCFF608EHV/@@download/ENCFF608EHV.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFF/ released mild to moderate bottlenecking ENCFF197ETF fastq reads ENCSR343IFJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CC2D1A-human ENCAB451DRR DNA False 2017-06-29 ENCODE 1 1 100 paired-ended 2 ENCFF608EHV 2507388978 Michael Snyder, Stanford f8294f6fb299126b74b1433f491cb615 SRA:SRR6213386 https://www.encodeproject.org/files/ENCFF197ETF/@@download/ENCFF197ETF.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFH/ released mild to moderate bottlenecking ENCFF160TXM fastq reads ENCSR343IFJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CC2D1A-human ENCAB451DRR DNA False 2017-06-29 ENCODE 2 1 100 paired-ended 1 ENCFF134VGP 2792291017 Michael Snyder, Stanford e31ec999d8e18d21d43d392708c32687 SRA:SRR6213387 https://www.encodeproject.org/files/ENCFF160TXM/@@download/ENCFF160TXM.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFF/ released mild to moderate bottlenecking ENCFF134VGP fastq reads ENCSR343IFJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CC2D1A-human ENCAB451DRR DNA False 2017-06-29 ENCODE 2 1 100 paired-ended 2 ENCFF160TXM 2880849524 Michael Snyder, Stanford a6f2c78db7d5ae9a021107ae79c654c8 SRA:SRR6213387 https://www.encodeproject.org/files/ENCFF134VGP/@@download/ENCFF134VGP.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFH/ released mild to moderate bottlenecking ENCFF588VIM bam alignments ENCSR343IFJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CC2D1A-human ENCAB451DRR DNA False 2017-06-29 ENCODE 1 100 ENCFF197ETF, ENCFF608EHV, ENCFF807MUK 3681205096 ENCODE Processing Pipeline 616ab18c4d288fe85e36fd8a718f1027 https://www.encodeproject.org/files/ENCFF588VIM/@@download/ENCFF588VIM.bam hg19 released mild to moderate bottlenecking ENCFF787QAB bam alignments ENCSR343IFJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CC2D1A-human ENCAB451DRR DNA False 2017-06-29 ENCODE 2 100 ENCFF134VGP, ENCFF160TXM, ENCFF807MUK 4302623716 ENCODE Processing Pipeline 83041f12e18e655ab0fd492bc4eea113 https://www.encodeproject.org/files/ENCFF787QAB/@@download/ENCFF787QAB.bam hg19 released mild to moderate bottlenecking ENCFF222DTT bigWig signal p-value ENCSR343IFJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CC2D1A-human ENCAB451DRR DNA False 2017-06-29 ENCODE 1 ENCFF581ZJL, ENCFF588VIM 1145373959 ENCODE Processing Pipeline 83c578d022fcf8954f4ddaa573c4d1e8 https://www.encodeproject.org/files/ENCFF222DTT/@@download/ENCFF222DTT.bigWig hg19 released mild to moderate bottlenecking ENCFF759CQR bigWig signal p-value ENCSR343IFJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CC2D1A-human ENCAB451DRR DNA False 2017-06-29 ENCODE 2 ENCFF581ZJL, ENCFF787QAB 1254949865 ENCODE Processing Pipeline d0e444a31636336f4eab2dfdb3b7bfab https://www.encodeproject.org/files/ENCFF759CQR/@@download/ENCFF759CQR.bigWig hg19 released mild to moderate bottlenecking ENCFF259AMJ bigWig signal p-value ENCSR343IFJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CC2D1A-human ENCAB451DRR DNA False 2017-06-29 ENCODE 1, 2 ENCFF581ZJL, ENCFF588VIM, ENCFF787QAB 1555811963 ENCODE Processing Pipeline 510d465e8b843a332ff131eaced62dfb https://www.encodeproject.org/files/ENCFF259AMJ/@@download/ENCFF259AMJ.bigWig hg19 released mild to moderate bottlenecking ENCFF774RBG bigWig fold change over control ENCSR343IFJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CC2D1A-human ENCAB451DRR DNA False 2017-06-29 ENCODE 1 ENCFF581ZJL, ENCFF588VIM 1098087174 ENCODE Processing Pipeline 8093e037ce311e9927eff377aad977cc https://www.encodeproject.org/files/ENCFF774RBG/@@download/ENCFF774RBG.bigWig hg19 released mild to moderate bottlenecking ENCFF975KUX bigWig fold change over control ENCSR343IFJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CC2D1A-human ENCAB451DRR DNA False 2017-06-29 ENCODE 2 ENCFF581ZJL, ENCFF787QAB 1240702201 ENCODE Processing Pipeline e89d2864e7fbf5049250540c14aea596 https://www.encodeproject.org/files/ENCFF975KUX/@@download/ENCFF975KUX.bigWig hg19 released mild to moderate bottlenecking ENCFF856RTE bigWig fold change over control ENCSR343IFJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CC2D1A-human ENCAB451DRR DNA False 2017-06-29 ENCODE 1, 2 ENCFF581ZJL, ENCFF588VIM, ENCFF787QAB 1693394426 ENCODE Processing Pipeline 45ac991c6687d0ba9f8e4a625830624f https://www.encodeproject.org/files/ENCFF856RTE/@@download/ENCFF856RTE.bigWig hg19 released mild to moderate bottlenecking ENCFF051PEB bed narrowPeak peaks ENCSR343IFJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CC2D1A-human ENCAB451DRR DNA False 2017-06-29 ENCODE 1 ENCFF581ZJL, ENCFF588VIM 6977902 ENCODE Processing Pipeline 46cb8d9c3077842332aab8b6a0696bd2 https://www.encodeproject.org/files/ENCFF051PEB/@@download/ENCFF051PEB.bed.gz hg19 released mild to moderate bottlenecking ENCFF299WDT bed narrowPeak peaks ENCSR343IFJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CC2D1A-human ENCAB451DRR DNA False 2017-06-29 ENCODE 2 ENCFF581ZJL, ENCFF787QAB 7053427 ENCODE Processing Pipeline f2d0976e6d84a7e40f3e8275aa373a62 https://www.encodeproject.org/files/ENCFF299WDT/@@download/ENCFF299WDT.bed.gz hg19 released mild to moderate bottlenecking ENCFF759MGA bed narrowPeak peaks ENCSR343IFJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CC2D1A-human ENCAB451DRR DNA False 2017-06-29 ENCODE 1, 2 ENCFF581ZJL, ENCFF588VIM, ENCFF787QAB 7277439 ENCODE Processing Pipeline 3c067f04d3a2c030d65e7af2da6a4c92 https://www.encodeproject.org/files/ENCFF759MGA/@@download/ENCFF759MGA.bed.gz hg19 released mild to moderate bottlenecking ENCFF266LTF bigBed narrowPeak peaks ENCSR343IFJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CC2D1A-human ENCAB451DRR DNA False 2017-06-29 ENCODE 1, 2 ENCFF759MGA 12974870 ENCODE Processing Pipeline 409c534260ea22174b995dacb10e6c87 https://www.encodeproject.org/files/ENCFF266LTF/@@download/ENCFF266LTF.bigBed hg19 released mild to moderate bottlenecking ENCFF129XVM bigBed narrowPeak peaks ENCSR343IFJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CC2D1A-human ENCAB451DRR DNA False 2017-06-29 ENCODE 1 ENCFF051PEB 13182166 ENCODE Processing Pipeline f72ccc0d78623f84724317ab95a780f3 https://www.encodeproject.org/files/ENCFF129XVM/@@download/ENCFF129XVM.bigBed hg19 released mild to moderate bottlenecking ENCFF584LLO bigBed narrowPeak peaks ENCSR343IFJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CC2D1A-human ENCAB451DRR DNA False 2017-06-29 ENCODE 2 ENCFF299WDT 13101976 ENCODE Processing Pipeline 1a3c440bb956869c8ccc4a9d556b4364 https://www.encodeproject.org/files/ENCFF584LLO/@@download/ENCFF584LLO.bigBed hg19 released mild to moderate bottlenecking ENCFF209YTE bed narrowPeak conservative idr thresholded peaks ENCSR343IFJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CC2D1A-human ENCAB451DRR DNA False 2017-06-29 ENCODE 1, 2 ENCFF001TDO, ENCFF051PEB, ENCFF299WDT, ENCFF759MGA 352149 ENCODE Processing Pipeline 3447cd4fda35616b6cfce2420fd5cd14 https://www.encodeproject.org/files/ENCFF209YTE/@@download/ENCFF209YTE.bed.gz hg19 released mild to moderate bottlenecking ENCFF599CPT bigBed narrowPeak conservative idr thresholded peaks ENCSR343IFJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CC2D1A-human ENCAB451DRR DNA False 2017-06-29 ENCODE 1, 2 ENCFF209YTE 728559 ENCODE Processing Pipeline 6be5c39ea0533718107a68713ee4b7bc https://www.encodeproject.org/files/ENCFF599CPT/@@download/ENCFF599CPT.bigBed hg19 released mild to moderate bottlenecking ENCFF874QUM bed narrowPeak optimal idr thresholded peaks ENCSR343IFJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CC2D1A-human ENCAB451DRR DNA False 2017-06-29 ENCODE 1, 2 ENCFF001TDO, ENCFF051PEB, ENCFF299WDT, ENCFF759MGA 486014 ENCODE Processing Pipeline 75a755f8a4bc844744a9df818b13c184 https://www.encodeproject.org/files/ENCFF874QUM/@@download/ENCFF874QUM.bed.gz hg19 released mild to moderate bottlenecking ENCFF280TFB bigBed narrowPeak optimal idr thresholded peaks ENCSR343IFJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CC2D1A-human ENCAB451DRR DNA False 2017-06-29 ENCODE 1, 2 ENCFF874QUM 938890 ENCODE Processing Pipeline eb91fdf6c3d6f0157cfbe4b8b0e4f8c2 https://www.encodeproject.org/files/ENCFF280TFB/@@download/ENCFF280TFB.bigBed hg19 released mild to moderate bottlenecking ENCFF689TUR bam unfiltered alignments ENCSR343IFJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CC2D1A-human ENCAB451DRR DNA False 2017-06-29 ENCODE 1 100 ENCFF197ETF, ENCFF608EHV, ENCFF643CGH 5217740920 ENCODE Processing Pipeline 58faf16ca78991d2e59ecd1186502eab https://www.encodeproject.org/files/ENCFF689TUR/@@download/ENCFF689TUR.bam GRCh38 released mild to moderate bottlenecking ENCFF306KNJ bam unfiltered alignments ENCSR343IFJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CC2D1A-human ENCAB451DRR DNA False 2017-06-29 ENCODE 2 100 ENCFF134VGP, ENCFF160TXM, ENCFF643CGH 5946424415 ENCODE Processing Pipeline 004eb7189ee47d0ccc14af9f6e77b480 https://www.encodeproject.org/files/ENCFF306KNJ/@@download/ENCFF306KNJ.bam GRCh38 released mild to moderate bottlenecking ENCFF138PZX bam alignments ENCSR343IFJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CC2D1A-human ENCAB451DRR DNA False 2017-06-29 ENCODE 1 100 ENCFF197ETF, ENCFF608EHV, ENCFF643CGH 3684165028 ENCODE Processing Pipeline ee2c90a9173fe7270ad877b9399b5813 https://www.encodeproject.org/files/ENCFF138PZX/@@download/ENCFF138PZX.bam GRCh38 released mild to moderate bottlenecking ENCFF039QUZ bam alignments ENCSR343IFJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CC2D1A-human ENCAB451DRR DNA False 2017-06-29 ENCODE 2 100 ENCFF134VGP, ENCFF160TXM, ENCFF643CGH 4305189649 ENCODE Processing Pipeline d2779d2c2f0a6640633f45e4772ba07d https://www.encodeproject.org/files/ENCFF039QUZ/@@download/ENCFF039QUZ.bam GRCh38 released mild to moderate bottlenecking ENCFF137LMQ bigWig signal p-value ENCSR343IFJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CC2D1A-human ENCAB451DRR DNA False 2017-06-29 ENCODE 1 ENCFF138PZX, ENCFF910IKB 1153838121 ENCODE Processing Pipeline 21016492416f576c69759701919ece03 https://www.encodeproject.org/files/ENCFF137LMQ/@@download/ENCFF137LMQ.bigWig GRCh38 released mild to moderate bottlenecking ENCFF276RJE bigWig signal p-value ENCSR343IFJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CC2D1A-human ENCAB451DRR DNA False 2017-06-29 ENCODE 2 ENCFF039QUZ, ENCFF910IKB 1143190193 ENCODE Processing Pipeline cae2efc3e0d2824074ece48f13261d0f https://www.encodeproject.org/files/ENCFF276RJE/@@download/ENCFF276RJE.bigWig GRCh38 released mild to moderate bottlenecking ENCFF104MUM bigWig signal p-value ENCSR343IFJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CC2D1A-human ENCAB451DRR DNA False 2017-06-29 ENCODE 1, 2 ENCFF039QUZ, ENCFF138PZX, ENCFF910IKB 1592711636 ENCODE Processing Pipeline 3e2d40d08f40c0e0310e0ecd4e0c2a02 https://www.encodeproject.org/files/ENCFF104MUM/@@download/ENCFF104MUM.bigWig GRCh38 released mild to moderate bottlenecking ENCFF064UXO bigWig fold change over control ENCSR343IFJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CC2D1A-human ENCAB451DRR DNA False 2017-06-29 ENCODE 1 ENCFF138PZX, ENCFF910IKB 1103285598 ENCODE Processing Pipeline 36940b6a5e79ce5b35975379360cb5ff https://www.encodeproject.org/files/ENCFF064UXO/@@download/ENCFF064UXO.bigWig GRCh38 released mild to moderate bottlenecking ENCFF910MJT bigWig fold change over control ENCSR343IFJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CC2D1A-human ENCAB451DRR DNA False 2017-06-29 ENCODE 2 ENCFF039QUZ, ENCFF910IKB 1242769048 ENCODE Processing Pipeline 1816a8826cbae57d38d8f53be5ae9219 https://www.encodeproject.org/files/ENCFF910MJT/@@download/ENCFF910MJT.bigWig GRCh38 released mild to moderate bottlenecking ENCFF791ETT bigWig fold change over control ENCSR343IFJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CC2D1A-human ENCAB451DRR DNA False 2017-06-29 ENCODE 1, 2 ENCFF039QUZ, ENCFF138PZX, ENCFF910IKB 1726710495 ENCODE Processing Pipeline c8a0db504c917d0838787105b35b46ed https://www.encodeproject.org/files/ENCFF791ETT/@@download/ENCFF791ETT.bigWig GRCh38 released mild to moderate bottlenecking ENCFF642XCG bed narrowPeak peaks ENCSR343IFJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CC2D1A-human ENCAB451DRR DNA False 2017-06-29 ENCODE 1 ENCFF138PZX, ENCFF910IKB 6875366 ENCODE Processing Pipeline 63c52e4cf17d7d2ed917de66914e03f1 https://www.encodeproject.org/files/ENCFF642XCG/@@download/ENCFF642XCG.bed.gz GRCh38 released mild to moderate bottlenecking ENCFF828OPT bed narrowPeak peaks ENCSR343IFJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CC2D1A-human ENCAB451DRR DNA False 2017-06-29 ENCODE 2 ENCFF039QUZ, ENCFF910IKB 6964913 ENCODE Processing Pipeline 1226c3f3c64130f5d8028877de748813 https://www.encodeproject.org/files/ENCFF828OPT/@@download/ENCFF828OPT.bed.gz GRCh38 released mild to moderate bottlenecking ENCFF444GLG bed narrowPeak peaks ENCSR343IFJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CC2D1A-human ENCAB451DRR DNA False 2017-06-29 ENCODE 1, 2 ENCFF039QUZ, ENCFF138PZX, ENCFF910IKB 7234514 ENCODE Processing Pipeline 4e752d4222efb03cb2f7096f86827769 https://www.encodeproject.org/files/ENCFF444GLG/@@download/ENCFF444GLG.bed.gz GRCh38 released mild to moderate bottlenecking ENCFF470WYV bigBed narrowPeak peaks ENCSR343IFJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CC2D1A-human ENCAB451DRR DNA False 2017-06-29 ENCODE 1 ENCFF642XCG 13179405 ENCODE Processing Pipeline 3e9fcffdcd444d3c3d378130e45d611a https://www.encodeproject.org/files/ENCFF470WYV/@@download/ENCFF470WYV.bigBed GRCh38 released mild to moderate bottlenecking ENCFF468DHY bigBed narrowPeak peaks ENCSR343IFJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CC2D1A-human ENCAB451DRR DNA False 2017-06-29 ENCODE 2 ENCFF828OPT 13091816 ENCODE Processing Pipeline 778f1f79360dfe9bc530b16bbb4502fa https://www.encodeproject.org/files/ENCFF468DHY/@@download/ENCFF468DHY.bigBed GRCh38 released mild to moderate bottlenecking ENCFF242CMO bigBed narrowPeak peaks ENCSR343IFJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CC2D1A-human ENCAB451DRR DNA False 2017-06-29 ENCODE 1, 2 ENCFF444GLG 12955408 ENCODE Processing Pipeline 2ffe5452aa56f1c3889fa20f52d85003 https://www.encodeproject.org/files/ENCFF242CMO/@@download/ENCFF242CMO.bigBed GRCh38 released mild to moderate bottlenecking ENCFF259WDV bed narrowPeak conservative idr thresholded peaks ENCSR343IFJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CC2D1A-human ENCAB451DRR DNA False 2017-06-29 ENCODE 1, 2 ENCFF419RSJ, ENCFF444GLG, ENCFF642XCG, ENCFF828OPT 343276 ENCODE Processing Pipeline 27ca242a548e4a1c705fa329ea00e07b https://www.encodeproject.org/files/ENCFF259WDV/@@download/ENCFF259WDV.bed.gz GRCh38 released mild to moderate bottlenecking ENCFF962CZX bigBed narrowPeak conservative idr thresholded peaks ENCSR343IFJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CC2D1A-human ENCAB451DRR DNA False 2017-06-29 ENCODE 1, 2 ENCFF259WDV 721533 ENCODE Processing Pipeline a106945403ca895d3166a3e29ddc119e https://www.encodeproject.org/files/ENCFF962CZX/@@download/ENCFF962CZX.bigBed GRCh38 released mild to moderate bottlenecking ENCFF180TUM bed narrowPeak optimal idr thresholded peaks ENCSR343IFJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CC2D1A-human ENCAB451DRR DNA False 2017-06-29 ENCODE 1, 2 ENCFF419RSJ, ENCFF444GLG, ENCFF642XCG, ENCFF828OPT 474250 ENCODE Processing Pipeline c6a01e42d9542587c329c4ba60a2e61a https://www.encodeproject.org/files/ENCFF180TUM/@@download/ENCFF180TUM.bed.gz GRCh38 released mild to moderate bottlenecking ENCFF512GTM bigBed narrowPeak optimal idr thresholded peaks ENCSR343IFJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CC2D1A-human ENCAB451DRR DNA False 2017-06-29 ENCODE 1, 2 ENCFF180TUM 928245 ENCODE Processing Pipeline e7da7f0a28b15558a52e02f6b4364c54 https://www.encodeproject.org/files/ENCFF512GTM/@@download/ENCFF512GTM.bigBed GRCh38 released mild to moderate bottlenecking ENCFF486FEL bam unfiltered alignments ENCSR414TYY ChIP-seq EFO:0002067 K562 cell line Homo sapiens RUNX1-human ENCAB000BDQ DNA False 2014-07-07 ENCODE 1 100 ENCFF002DOZ, ENCFF002EGE, ENCFF807MUK 5014426626 ENCODE Processing Pipeline a2bedece7ae7fc2ad3669ead0f5df9ed https://www.encodeproject.org/files/ENCFF486FEL/@@download/ENCFF486FEL.bam hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF548ZOU bam unfiltered alignments ENCSR414TYY ChIP-seq EFO:0002067 K562 cell line Homo sapiens RUNX1-human ENCAB000BDQ DNA False 2014-07-07 ENCODE 2 100 ENCFF002DPH, ENCFF002EGD, ENCFF807MUK 5655885771 ENCODE Processing Pipeline 258d0852f104343ad84fc7f325b648a2 https://www.encodeproject.org/files/ENCFF548ZOU/@@download/ENCFF548ZOU.bam hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF002DOZ fastq reads ENCSR414TYY ChIP-seq EFO:0002067 K562 cell line Homo sapiens RUNX1-human ENCAB000BDQ DNA False 2014-07-07 ENCODE 1 1 100 paired-ended 1 ENCFF002EGE 2422120907 Michael Snyder, Stanford f066366ed0da12e2c6bbfea280f379f7 SRA:SRR5111632 https://www.encodeproject.org/files/ENCFF002DOZ/@@download/ENCFF002DOZ.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFF/ released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF002DPH fastq reads ENCSR414TYY ChIP-seq EFO:0002067 K562 cell line Homo sapiens RUNX1-human ENCAB000BDQ DNA False 2014-07-07 ENCODE 2 1 100 paired-ended 2 ENCFF002EGD 2639153320 Michael Snyder, Stanford 9ba619fc8552c49d2cd98f27b452c029 SRA:SRR5111631 https://www.encodeproject.org/files/ENCFF002DPH/@@download/ENCFF002DPH.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFA/ released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF246CBF bed narrowPeak peaks ENCSR414TYY ChIP-seq EFO:0002067 K562 cell line Homo sapiens RUNX1-human ENCAB000BDQ DNA False 2014-07-07 ENCODE 1 ENCFF481RQA, ENCFF581ZJL 5734520 ENCODE Processing Pipeline 86b483a18a63ce2a53d4da7d522dfe3b https://www.encodeproject.org/files/ENCFF246CBF/@@download/ENCFF246CBF.bed.gz hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF002EGD fastq reads ENCSR414TYY ChIP-seq EFO:0002067 K562 cell line Homo sapiens RUNX1-human ENCAB000BDQ DNA False 2014-07-07 ENCODE 2 1 100 paired-ended 1 ENCFF002DPH 2625399033 Michael Snyder, Stanford 812665310654c33619de092cd130bd04 SRA:SRR5111631 https://www.encodeproject.org/files/ENCFF002EGD/@@download/ENCFF002EGD.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFD/ released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF002EGE fastq reads ENCSR414TYY ChIP-seq EFO:0002067 K562 cell line Homo sapiens RUNX1-human ENCAB000BDQ DNA False 2014-07-07 ENCODE 1 1 100 paired-ended 2 ENCFF002DOZ 2434996255 Michael Snyder, Stanford 7638f3990d9c6cb1947093da124eb539 SRA:SRR5111632 https://www.encodeproject.org/files/ENCFF002EGE/@@download/ENCFF002EGE.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFH/ released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF401PPU bed narrowPeak peaks ENCSR414TYY ChIP-seq EFO:0002067 K562 cell line Homo sapiens RUNX1-human ENCAB000BDQ DNA False 2014-07-07 ENCODE 1, 2 ENCFF051LWI, ENCFF095UEF, ENCFF481RQA, ENCFF581ZJL 6912773 ENCODE Processing Pipeline df092442203bf240ff9ab33f7e8489ea https://www.encodeproject.org/files/ENCFF401PPU/@@download/ENCFF401PPU.bed.gz hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF083XOF bed narrowPeak peaks ENCSR414TYY ChIP-seq EFO:0002067 K562 cell line Homo sapiens RUNX1-human ENCAB000BDQ DNA False 2014-07-07 ENCODE 2 ENCFF051LWI, ENCFF095UEF 6014706 ENCODE Processing Pipeline ff0df313b2f61b66df6a8b77f1d620a0 https://www.encodeproject.org/files/ENCFF083XOF/@@download/ENCFF083XOF.bed.gz hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF817SLI bigBed narrowPeak peaks ENCSR414TYY ChIP-seq EFO:0002067 K562 cell line Homo sapiens RUNX1-human ENCAB000BDQ DNA False 2014-07-07 ENCODE 1 ENCFF246CBF 11316585 ENCODE Processing Pipeline 1e77f45373e5248b0fb66b39fec359ea https://www.encodeproject.org/files/ENCFF817SLI/@@download/ENCFF817SLI.bigBed hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF981TNZ bigBed narrowPeak peaks ENCSR414TYY ChIP-seq EFO:0002067 K562 cell line Homo sapiens RUNX1-human ENCAB000BDQ DNA False 2014-07-07 ENCODE 1, 2 ENCFF401PPU 11180311 ENCODE Processing Pipeline f4a19fad966d6af6fda480c54ffd1c3c https://www.encodeproject.org/files/ENCFF981TNZ/@@download/ENCFF981TNZ.bigBed hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF291YTZ bigBed narrowPeak peaks ENCSR414TYY ChIP-seq EFO:0002067 K562 cell line Homo sapiens RUNX1-human ENCAB000BDQ DNA False 2014-07-07 ENCODE 2 ENCFF083XOF 11200103 ENCODE Processing Pipeline f4ffcdd09a0142e2a60c2215bfe7351e https://www.encodeproject.org/files/ENCFF291YTZ/@@download/ENCFF291YTZ.bigBed hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF168KBY bed narrowPeak conservative idr thresholded peaks ENCSR414TYY ChIP-seq EFO:0002067 K562 cell line Homo sapiens RUNX1-human ENCAB000BDQ DNA False 2014-07-07 ENCODE 1, 2 ENCFF001TDO, ENCFF083XOF, ENCFF246CBF, ENCFF401PPU 61456 ENCODE Processing Pipeline 19f0c8975a9734a45cf296c075231184 https://www.encodeproject.org/files/ENCFF168KBY/@@download/ENCFF168KBY.bed.gz hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF763CRU bigBed narrowPeak optimal idr thresholded peaks ENCSR414TYY ChIP-seq EFO:0002067 K562 cell line Homo sapiens RUNX1-human ENCAB000BDQ DNA False 2014-07-07 ENCODE 1, 2 ENCFF573DRR 248800 ENCODE Processing Pipeline ce2f4303282c415ca851e158cc38db22 https://www.encodeproject.org/files/ENCFF763CRU/@@download/ENCFF763CRU.bigBed hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF152UDH bigBed narrowPeak conservative idr thresholded peaks ENCSR414TYY ChIP-seq EFO:0002067 K562 cell line Homo sapiens RUNX1-human ENCAB000BDQ DNA False 2014-07-07 ENCODE 1, 2 ENCFF168KBY 154642 ENCODE Processing Pipeline ef31cc839fd59209c00d3a2787bc2906 https://www.encodeproject.org/files/ENCFF152UDH/@@download/ENCFF152UDH.bigBed hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF573DRR bed narrowPeak optimal idr thresholded peaks ENCSR414TYY ChIP-seq EFO:0002067 K562 cell line Homo sapiens RUNX1-human ENCAB000BDQ DNA False 2014-07-07 ENCODE 1, 2 ENCFF001TDO, ENCFF083XOF, ENCFF246CBF, ENCFF401PPU 100617 ENCODE Processing Pipeline 5fd41070314178340b7f951075c763b4 https://www.encodeproject.org/files/ENCFF573DRR/@@download/ENCFF573DRR.bed.gz hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF095UEF bam alignments ENCSR414TYY ChIP-seq EFO:0002067 K562 cell line Homo sapiens RUNX1-human ENCAB000BDQ DNA False 2014-07-07 ENCODE 2 100 ENCFF002DPH, ENCFF002EGD, ENCFF807MUK 4710573262 ENCODE Processing Pipeline 289be9e2f4d6e5696bd77514061b467f https://www.encodeproject.org/files/ENCFF095UEF/@@download/ENCFF095UEF.bam hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF481RQA bam alignments ENCSR414TYY ChIP-seq EFO:0002067 K562 cell line Homo sapiens RUNX1-human ENCAB000BDQ DNA False 2014-07-07 ENCODE 1 100 ENCFF002DOZ, ENCFF002EGE, ENCFF807MUK 3463856910 ENCODE Processing Pipeline 7bf39f063f5593b11de418c5092cfece https://www.encodeproject.org/files/ENCFF481RQA/@@download/ENCFF481RQA.bam hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF750MSY bigWig signal p-value ENCSR414TYY ChIP-seq EFO:0002067 K562 cell line Homo sapiens RUNX1-human ENCAB000BDQ DNA False 2014-07-07 ENCODE 1 ENCFF481RQA, ENCFF581ZJL 1064208443 ENCODE Processing Pipeline feb36b8884a61e798d5120a7d3d24d4a https://www.encodeproject.org/files/ENCFF750MSY/@@download/ENCFF750MSY.bigWig hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF360VOC bigWig signal p-value ENCSR414TYY ChIP-seq EFO:0002067 K562 cell line Homo sapiens RUNX1-human ENCAB000BDQ DNA False 2014-07-07 ENCODE 2 ENCFF051LWI, ENCFF095UEF 1286727296 ENCODE Processing Pipeline 5d1b02508dbf0d41fd2a7e1b6da32778 https://www.encodeproject.org/files/ENCFF360VOC/@@download/ENCFF360VOC.bigWig hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF887PEN bigWig signal p-value ENCSR414TYY ChIP-seq EFO:0002067 K562 cell line Homo sapiens RUNX1-human ENCAB000BDQ DNA False 2014-07-07 ENCODE 1, 2 ENCFF051LWI, ENCFF095UEF, ENCFF481RQA, ENCFF581ZJL 1944322166 ENCODE Processing Pipeline a3c0de3527f5d643cd73a7cc52a61aa3 https://www.encodeproject.org/files/ENCFF887PEN/@@download/ENCFF887PEN.bigWig hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF239YUM bigWig fold change over control ENCSR414TYY ChIP-seq EFO:0002067 K562 cell line Homo sapiens RUNX1-human ENCAB000BDQ DNA False 2014-07-07 ENCODE 1 ENCFF481RQA, ENCFF581ZJL 1071678127 ENCODE Processing Pipeline f73a03b2f14f3164f5e09b295d6f3488 https://www.encodeproject.org/files/ENCFF239YUM/@@download/ENCFF239YUM.bigWig hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF432WCK bigWig fold change over control ENCSR414TYY ChIP-seq EFO:0002067 K562 cell line Homo sapiens RUNX1-human ENCAB000BDQ DNA False 2014-07-07 ENCODE 2 ENCFF051LWI, ENCFF095UEF 1232325931 ENCODE Processing Pipeline 15401a17260c94c9d5cc8d7f92649200 https://www.encodeproject.org/files/ENCFF432WCK/@@download/ENCFF432WCK.bigWig hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF036VRY bigBed narrowPeak peaks ENCSR414TYY ChIP-seq EFO:0002067 K562 cell line Homo sapiens RUNX1-human ENCAB000BDQ DNA False 2014-07-07 ENCODE 1 ENCFF766PWX 11345822 ENCODE Processing Pipeline e2e696459744f18b34f837a7e22f25a4 https://www.encodeproject.org/files/ENCFF036VRY/@@download/ENCFF036VRY.bigBed hg19 archived low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF679DLF bigBed narrowPeak peaks ENCSR414TYY ChIP-seq EFO:0002067 K562 cell line Homo sapiens RUNX1-human ENCAB000BDQ DNA False 2014-07-07 ENCODE 2 ENCFF436PYK 11219042 ENCODE Processing Pipeline edb65ba4675caf857687c3f7a93f507a https://www.encodeproject.org/files/ENCFF679DLF/@@download/ENCFF679DLF.bigBed hg19 archived low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF436PYK bed narrowPeak peaks ENCSR414TYY ChIP-seq EFO:0002067 K562 cell line Homo sapiens RUNX1-human ENCAB000BDQ DNA False 2014-07-07 ENCODE 2 ENCFF051LWI, ENCFF095UEF 6191704 ENCODE Processing Pipeline dfd4ddecf20c1deb9cf5c955f1208c50 https://www.encodeproject.org/files/ENCFF436PYK/@@download/ENCFF436PYK.bed.gz hg19 archived low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF826RWZ bed narrowPeak peaks ENCSR414TYY ChIP-seq EFO:0002067 K562 cell line Homo sapiens RUNX1-human ENCAB000BDQ DNA False 2014-07-07 ENCODE 1, 2 ENCFF051LWI, ENCFF095UEF, ENCFF481RQA, ENCFF581ZJL 6976755 ENCODE Processing Pipeline 119c463f64589438cdd39745a0d57bc8 https://www.encodeproject.org/files/ENCFF826RWZ/@@download/ENCFF826RWZ.bed.gz hg19 archived low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF962DIA bigWig fold change over control ENCSR414TYY ChIP-seq EFO:0002067 K562 cell line Homo sapiens RUNX1-human ENCAB000BDQ DNA False 2014-07-07 ENCODE 1, 2 ENCFF051LWI, ENCFF095UEF, ENCFF481RQA, ENCFF581ZJL 2136603348 ENCODE Processing Pipeline 5d352c7f4bd1cacdcdf93db7df02ee62 https://www.encodeproject.org/files/ENCFF962DIA/@@download/ENCFF962DIA.bigWig hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF766PWX bed narrowPeak peaks ENCSR414TYY ChIP-seq EFO:0002067 K562 cell line Homo sapiens RUNX1-human ENCAB000BDQ DNA False 2014-07-07 ENCODE 1 ENCFF481RQA, ENCFF581ZJL 5925779 ENCODE Processing Pipeline 4ab6a0de3a57b3c8f5aed0957747ab0a https://www.encodeproject.org/files/ENCFF766PWX/@@download/ENCFF766PWX.bed.gz hg19 archived low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF932XCP bigBed narrowPeak peaks ENCSR414TYY ChIP-seq EFO:0002067 K562 cell line Homo sapiens RUNX1-human ENCAB000BDQ DNA False 2014-07-07 ENCODE 1, 2 ENCFF826RWZ 11182212 ENCODE Processing Pipeline ec25b11f500c8ca039a5cc3e018b0985 https://www.encodeproject.org/files/ENCFF932XCP/@@download/ENCFF932XCP.bigBed hg19 archived low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF289BJO bam unfiltered alignments ENCSR414TYY ChIP-seq EFO:0002067 K562 cell line Homo sapiens RUNX1-human ENCAB000BDQ DNA False 2014-07-07 ENCODE 1 100 ENCFF002DOZ, ENCFF002EGE, ENCFF643CGH 5016012627 ENCODE Processing Pipeline 0ebd832f6b973dd13245ae8312d05e52 https://www.encodeproject.org/files/ENCFF289BJO/@@download/ENCFF289BJO.bam GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF659VBT bam unfiltered alignments ENCSR414TYY ChIP-seq EFO:0002067 K562 cell line Homo sapiens RUNX1-human ENCAB000BDQ DNA False 2014-07-07 ENCODE 2 100 ENCFF002DPH, ENCFF002EGD, ENCFF643CGH 5661468520 ENCODE Processing Pipeline 23a0851099daf9420c758913b0606cb6 https://www.encodeproject.org/files/ENCFF659VBT/@@download/ENCFF659VBT.bam GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF548STV bam alignments ENCSR414TYY ChIP-seq EFO:0002067 K562 cell line Homo sapiens RUNX1-human ENCAB000BDQ DNA False 2014-07-07 ENCODE 1 100 ENCFF002DOZ, ENCFF002EGE, ENCFF643CGH 3464471563 ENCODE Processing Pipeline ab1f7585b1c690b8e0e13f230e654ff2 https://www.encodeproject.org/files/ENCFF548STV/@@download/ENCFF548STV.bam GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF350NUJ bam alignments ENCSR414TYY ChIP-seq EFO:0002067 K562 cell line Homo sapiens RUNX1-human ENCAB000BDQ DNA False 2014-07-07 ENCODE 2 100 ENCFF002DPH, ENCFF002EGD, ENCFF643CGH 4712081683 ENCODE Processing Pipeline cc41d836dc041b5a8ba6f36c7bd00569 https://www.encodeproject.org/files/ENCFF350NUJ/@@download/ENCFF350NUJ.bam GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF290VKQ bigWig signal p-value ENCSR414TYY ChIP-seq EFO:0002067 K562 cell line Homo sapiens RUNX1-human ENCAB000BDQ DNA False 2014-07-07 ENCODE 1 ENCFF548STV, ENCFF910IKB 1109366834 ENCODE Processing Pipeline 43f7b90131b34c00f3f4216bd52837d8 https://www.encodeproject.org/files/ENCFF290VKQ/@@download/ENCFF290VKQ.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF235HYN bigWig signal p-value ENCSR414TYY ChIP-seq EFO:0002067 K562 cell line Homo sapiens RUNX1-human ENCAB000BDQ DNA False 2014-07-07 ENCODE 2 ENCFF227IZS, ENCFF350NUJ 1138118947 ENCODE Processing Pipeline 8ebaa4a5f7f8e77d99a44c2ff0bb8e18 https://www.encodeproject.org/files/ENCFF235HYN/@@download/ENCFF235HYN.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF825MDH bigWig signal p-value ENCSR414TYY ChIP-seq EFO:0002067 K562 cell line Homo sapiens RUNX1-human ENCAB000BDQ DNA False 2014-07-07 ENCODE 1, 2 ENCFF227IZS, ENCFF350NUJ, ENCFF548STV, ENCFF910IKB 1932541717 ENCODE Processing Pipeline 23be446973a8c1837aaef69381282e43 https://www.encodeproject.org/files/ENCFF825MDH/@@download/ENCFF825MDH.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF274EPU bigWig fold change over control ENCSR414TYY ChIP-seq EFO:0002067 K562 cell line Homo sapiens RUNX1-human ENCAB000BDQ DNA False 2014-07-07 ENCODE 1 ENCFF548STV, ENCFF910IKB 1070823957 ENCODE Processing Pipeline 0a9d9224645f8f649b2fb2ab26543f3d https://www.encodeproject.org/files/ENCFF274EPU/@@download/ENCFF274EPU.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF385NAI bigWig fold change over control ENCSR414TYY ChIP-seq EFO:0002067 K562 cell line Homo sapiens RUNX1-human ENCAB000BDQ DNA False 2014-07-07 ENCODE 2 ENCFF227IZS, ENCFF350NUJ 1238704044 ENCODE Processing Pipeline 1295053605e2613d70accf0c0560cb7a https://www.encodeproject.org/files/ENCFF385NAI/@@download/ENCFF385NAI.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF580PSQ bigWig fold change over control ENCSR414TYY ChIP-seq EFO:0002067 K562 cell line Homo sapiens RUNX1-human ENCAB000BDQ DNA False 2014-07-07 ENCODE 1, 2 ENCFF227IZS, ENCFF350NUJ, ENCFF548STV, ENCFF910IKB 2137389712 ENCODE Processing Pipeline 7031a209b768198489bf382d2965eb36 https://www.encodeproject.org/files/ENCFF580PSQ/@@download/ENCFF580PSQ.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF370QHV bed narrowPeak peaks ENCSR414TYY ChIP-seq EFO:0002067 K562 cell line Homo sapiens RUNX1-human ENCAB000BDQ DNA False 2014-07-07 ENCODE 1 ENCFF548STV, ENCFF910IKB 5733001 ENCODE Processing Pipeline 3a48d9cf00b3a18e1ccaef13d57a2c3e https://www.encodeproject.org/files/ENCFF370QHV/@@download/ENCFF370QHV.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF172NAU bed narrowPeak peaks ENCSR414TYY ChIP-seq EFO:0002067 K562 cell line Homo sapiens RUNX1-human ENCAB000BDQ DNA False 2014-07-07 ENCODE 2 ENCFF227IZS, ENCFF350NUJ 6008035 ENCODE Processing Pipeline 91e7565e155fe24d76079c4c9ea7af8a https://www.encodeproject.org/files/ENCFF172NAU/@@download/ENCFF172NAU.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF519QJO bed narrowPeak peaks ENCSR414TYY ChIP-seq EFO:0002067 K562 cell line Homo sapiens RUNX1-human ENCAB000BDQ DNA False 2014-07-07 ENCODE 1, 2 ENCFF227IZS, ENCFF350NUJ, ENCFF548STV, ENCFF910IKB 6917823 ENCODE Processing Pipeline 99f229de73ee1e73c9d58312fe45fe79 https://www.encodeproject.org/files/ENCFF519QJO/@@download/ENCFF519QJO.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF046SRO bigBed narrowPeak peaks ENCSR414TYY ChIP-seq EFO:0002067 K562 cell line Homo sapiens RUNX1-human ENCAB000BDQ DNA False 2014-07-07 ENCODE 1 ENCFF370QHV 11335173 ENCODE Processing Pipeline b0b58bbbaf740d9942f9c5f1b285bb20 https://www.encodeproject.org/files/ENCFF046SRO/@@download/ENCFF046SRO.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF611TZV bigBed narrowPeak peaks ENCSR414TYY ChIP-seq EFO:0002067 K562 cell line Homo sapiens RUNX1-human ENCAB000BDQ DNA False 2014-07-07 ENCODE 2 ENCFF172NAU 11217727 ENCODE Processing Pipeline 1d50ba9edfe16c46313658ae5f0694c9 https://www.encodeproject.org/files/ENCFF611TZV/@@download/ENCFF611TZV.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF016NKD bigBed narrowPeak peaks ENCSR414TYY ChIP-seq EFO:0002067 K562 cell line Homo sapiens RUNX1-human ENCAB000BDQ DNA False 2014-07-07 ENCODE 1, 2 ENCFF519QJO 11199446 ENCODE Processing Pipeline cd84b636ece3150c1f4850ceac5d83b5 https://www.encodeproject.org/files/ENCFF016NKD/@@download/ENCFF016NKD.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF264QLP bed narrowPeak conservative idr thresholded peaks ENCSR414TYY ChIP-seq EFO:0002067 K562 cell line Homo sapiens RUNX1-human ENCAB000BDQ DNA False 2014-07-07 ENCODE 1, 2 ENCFF172NAU, ENCFF370QHV, ENCFF419RSJ, ENCFF519QJO 60729 ENCODE Processing Pipeline 278fde192db149dc4113da0dc7ca0841 https://www.encodeproject.org/files/ENCFF264QLP/@@download/ENCFF264QLP.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF020EXX bigBed narrowPeak conservative idr thresholded peaks ENCSR414TYY ChIP-seq EFO:0002067 K562 cell line Homo sapiens RUNX1-human ENCAB000BDQ DNA False 2014-07-07 ENCODE 1, 2 ENCFF264QLP 155070 ENCODE Processing Pipeline 5c67d29f85d41a00051fc1ef15849ec2 https://www.encodeproject.org/files/ENCFF020EXX/@@download/ENCFF020EXX.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF545WXN bed narrowPeak optimal idr thresholded peaks ENCSR414TYY ChIP-seq EFO:0002067 K562 cell line Homo sapiens RUNX1-human ENCAB000BDQ DNA False 2014-07-07 ENCODE 1, 2 ENCFF172NAU, ENCFF370QHV, ENCFF419RSJ, ENCFF519QJO 97883 ENCODE Processing Pipeline 3b9c2426564898386263afe97322ba0d https://www.encodeproject.org/files/ENCFF545WXN/@@download/ENCFF545WXN.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF187AEJ bigBed narrowPeak optimal idr thresholded peaks ENCSR414TYY ChIP-seq EFO:0002067 K562 cell line Homo sapiens RUNX1-human ENCAB000BDQ DNA False 2014-07-07 ENCODE 1, 2 ENCFF545WXN 206367 ENCODE Processing Pipeline 66d9387172b05794ea4d30847cf40122 https://www.encodeproject.org/files/ENCFF187AEJ/@@download/ENCFF187AEJ.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF750STT bigBed narrowPeak conservative idr thresholded peaks ENCSR414TYY ChIP-seq EFO:0002067 K562 cell line Homo sapiens RUNX1-human ENCAB000BDQ DNA False 2014-07-07 ENCODE 1, 2 ENCFF089MLX 140701 ENCODE Processing Pipeline 11b72299b8bbf66fbf2ec61e3bd61d28 https://www.encodeproject.org/files/ENCFF750STT/@@download/ENCFF750STT.bigBed hg19 archived low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF089MLX bed narrowPeak conservative idr thresholded peaks ENCSR414TYY ChIP-seq EFO:0002067 K562 cell line Homo sapiens RUNX1-human ENCAB000BDQ DNA False 2014-07-07 ENCODE 1, 2 ENCFF001TDO, ENCFF436PYK, ENCFF766PWX, ENCFF826RWZ 51333 ENCODE Processing Pipeline ce4b88de4d6b5bc3ce3cbf87ad9fe12b https://www.encodeproject.org/files/ENCFF089MLX/@@download/ENCFF089MLX.bed.gz hg19 archived low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF467ITU bigBed narrowPeak optimal idr thresholded peaks ENCSR414TYY ChIP-seq EFO:0002067 K562 cell line Homo sapiens RUNX1-human ENCAB000BDQ DNA False 2014-07-07 ENCODE 1, 2 ENCFF804ABO 183054 ENCODE Processing Pipeline c82de4cb57f09cf50ef43fce7eb3636c https://www.encodeproject.org/files/ENCFF467ITU/@@download/ENCFF467ITU.bigBed hg19 archived low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF804ABO bed narrowPeak optimal idr thresholded peaks ENCSR414TYY ChIP-seq EFO:0002067 K562 cell line Homo sapiens RUNX1-human ENCAB000BDQ DNA False 2014-07-07 ENCODE 1, 2 ENCFF001TDO, ENCFF436PYK, ENCFF766PWX, ENCFF826RWZ 82785 ENCODE Processing Pipeline 148481b2344282d1938e29f26cd718b8 https://www.encodeproject.org/files/ENCFF804ABO/@@download/ENCFF804ABO.bed.gz hg19 archived low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF000QHP bam alignments ENCSR000BKS ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1 ENCFF000QHU 351256754 Richard Myers, HAIB 2e5b9364f53149c1d2a14f514b3b807e https://www.encodeproject.org/files/ENCFF000QHP/@@download/ENCFF000QHP.bam hg19 archived mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, insufficient read depth, severe bottlenecking extremely low read depth, missing control alignments ENCFF000QHQ bigBed broadPeak peaks ENCSR000BKS ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1 1 ENCFF001ULN 472589 Richard Myers, HAIB b77fac27cf14e478f730e842fbc73405 https://www.encodeproject.org/files/ENCFF000QHQ/@@download/ENCFF000QHQ.bigBed hg19 archived mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, insufficient read depth, severe bottlenecking extremely low read depth, missing control alignments ENCFF000QHR bigBed broadPeak peaks ENCSR000BKS ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 2 1 ENCFF001ULO 406171 Richard Myers, HAIB b3102ec2a97772954bb4a2c29cf0f269 https://www.encodeproject.org/files/ENCFF000QHR/@@download/ENCFF000QHR.bigBed hg19 archived mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, insufficient read depth, severe bottlenecking extremely low read depth, missing control alignments ENCFF000QHS bam alignments ENCSR000BKS ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 2 ENCFF000QHW 437535423 Richard Myers, HAIB 8fc0502eb496585c18fda20b04eddc8d https://www.encodeproject.org/files/ENCFF000QHS/@@download/ENCFF000QHS.bam hg19 archived mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, insufficient read depth, severe bottlenecking extremely low read depth, missing control alignments ENCFF000QHT bigWig raw signal ENCSR000BKS ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1 1 15350943 Richard Myers, HAIB 423bd5aedf51a41a896458dcc0167b59 https://www.encodeproject.org/files/ENCFF000QHT/@@download/ENCFF000QHT.bigWig hg19 archived mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample, missing derived_from control insufficient read depth, insufficient read depth, severe bottlenecking extremely low read depth, missing control alignments ENCFF000QHU fastq reads ENCSR000BKS ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1 1 36 single-ended 333919947 Richard Myers, HAIB 9981b8587f0579592d6a435071d76788 https://www.encodeproject.org/files/ENCFF000QHU/@@download/ENCFF000QHU.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000QEX/ released mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, insufficient read depth, severe bottlenecking extremely low read depth, missing control alignments ENCFF000QHV bigWig raw signal ENCSR000BKS ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 2 1 14363373 Richard Myers, HAIB c7969af258394ad59de418e02b8d967f https://www.encodeproject.org/files/ENCFF000QHV/@@download/ENCFF000QHV.bigWig hg19 archived mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample, missing derived_from control insufficient read depth, insufficient read depth, severe bottlenecking extremely low read depth, missing control alignments ENCFF000QHW fastq reads ENCSR000BKS ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 2 1 36 single-ended 447452122 Richard Myers, HAIB d69664430fbf8a628230c056b6895cda https://www.encodeproject.org/files/ENCFF000QHW/@@download/ENCFF000QHW.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000QEX/ released mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, insufficient read depth, severe bottlenecking extremely low read depth, missing control alignments ENCFF001ULN bed broadPeak peaks ENCSR000BKS ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1 1 276976 Richard Myers, HAIB 63cbe5fe1a6dabd98368a3512aa3f4fb https://www.encodeproject.org/files/ENCFF001ULN/@@download/ENCFF001ULN.bed.gz hg19 archived mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample, missing derived_from control insufficient read depth, insufficient read depth, severe bottlenecking extremely low read depth, missing control alignments ENCFF001ULO bed broadPeak peaks ENCSR000BKS ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 2 1 224103 Richard Myers, HAIB 692f61773cbbb5d48feb06decb5de2af https://www.encodeproject.org/files/ENCFF001ULO/@@download/ENCFF001ULO.bed.gz hg19 archived mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample, missing derived_from control insufficient read depth, insufficient read depth, severe bottlenecking extremely low read depth, missing control alignments ENCFF002CMR bed narrowPeak optimal idr thresholded peaks ENCSR000BKS ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 312494 ENCODE Consortium Analysis Working Group c9a0dad556d6b26898d8aea60ac58f32 https://www.encodeproject.org/files/ENCFF002CMR/@@download/ENCFF002CMR.bed.gz hg19 archived mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample, missing derived_from control insufficient read depth, insufficient read depth, severe bottlenecking extremely low read depth, missing control alignments ENCFF311MSU bigBed narrowPeak optimal idr thresholded peaks ENCSR000BKS ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE ENCFF002CMR 871499 ENCODE Consortium b71fd4b0ed7c8d3a0e8948862befa526 https://www.encodeproject.org/files/ENCFF311MSU/@@download/ENCFF311MSU.bigBed hg19 archived mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, insufficient read depth, severe bottlenecking extremely low read depth, missing control alignments ENCFF993RMP bam unfiltered alignments ENCSR000BKS ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000QHU, ENCFF643CGH 417629498 ENCODE Processing Pipeline 0a612acaa17645ba373637c5289ab02f https://www.encodeproject.org/files/ENCFF993RMP/@@download/ENCFF993RMP.bam GRCh38 released mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, insufficient read depth, severe bottlenecking extremely low read depth, missing control alignments ENCFF025QKV bam alignments ENCSR000BKS ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000QHU, ENCFF643CGH 169434641 ENCODE Processing Pipeline b23c6ea894f93cd5ba65a7481643724b https://www.encodeproject.org/files/ENCFF025QKV/@@download/ENCFF025QKV.bam GRCh38 released mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, insufficient read depth, severe bottlenecking extremely low read depth, missing control alignments ENCFF075NNL bam unfiltered alignments ENCSR000BKS ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000QHW, ENCFF643CGH 538374354 ENCODE Processing Pipeline d447fb6f611b619c601c6396ffb2b8ad https://www.encodeproject.org/files/ENCFF075NNL/@@download/ENCFF075NNL.bam GRCh38 released mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, insufficient read depth, severe bottlenecking extremely low read depth, missing control alignments ENCFF919HAZ bam alignments ENCSR000BKS ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000QHW, ENCFF643CGH 204759997 ENCODE Processing Pipeline 73ac3660da4132b949317eb9a4589d20 https://www.encodeproject.org/files/ENCFF919HAZ/@@download/ENCFF919HAZ.bam GRCh38 released mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, insufficient read depth, severe bottlenecking extremely low read depth, missing control alignments ENCFF278YTL bam alignments ENCSR000BKS ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000QHU, ENCFF807MUK 169579468 ENCODE Processing Pipeline e729cbbe8493c22a8e7f8c0917da18c8 https://www.encodeproject.org/files/ENCFF278YTL/@@download/ENCFF278YTL.bam hg19 released mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, insufficient read depth, severe bottlenecking extremely low read depth, missing control alignments ENCFF926IER bam unfiltered alignments ENCSR000BKS ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000QHU, ENCFF807MUK 417051309 ENCODE Processing Pipeline 97e0e41ba9e3b3184d9b4fce349a7169 https://www.encodeproject.org/files/ENCFF926IER/@@download/ENCFF926IER.bam hg19 released mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, insufficient read depth, severe bottlenecking extremely low read depth, missing control alignments ENCFF415XRC bam unfiltered alignments ENCSR000BKS ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000QHW, ENCFF807MUK 537566079 ENCODE Processing Pipeline d99c4f3efade793ee39b0ca854bf1be0 https://www.encodeproject.org/files/ENCFF415XRC/@@download/ENCFF415XRC.bam hg19 released mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, insufficient read depth, severe bottlenecking extremely low read depth, missing control alignments ENCFF077WPD bam alignments ENCSR000BKS ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000QHW, ENCFF807MUK 204909369 ENCODE Processing Pipeline 2c5284c9d80429fa4d8a06063ea865f5 https://www.encodeproject.org/files/ENCFF077WPD/@@download/ENCFF077WPD.bam hg19 released mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, insufficient read depth, severe bottlenecking extremely low read depth, missing control alignments ENCFF580IYW bigWig signal p-value ENCSR000BKS ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1 ENCFF025QKV 161255293 ENCODE Processing Pipeline b419ceb50f345408ce5a1a6dc5dd9741 https://www.encodeproject.org/files/ENCFF580IYW/@@download/ENCFF580IYW.bigWig GRCh38 released mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, insufficient read depth, severe bottlenecking extremely low read depth, missing control alignments ENCFF101GBL bigWig signal p-value ENCSR000BKS ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF025QKV, ENCFF919HAZ 204026457 ENCODE Processing Pipeline 942faaaf7844c9f6153e7c1b045e0eb1 https://www.encodeproject.org/files/ENCFF101GBL/@@download/ENCFF101GBL.bigWig GRCh38 released mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, insufficient read depth, severe bottlenecking extremely low read depth, missing control alignments ENCFF844VWA bigWig signal p-value ENCSR000BKS ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 2 ENCFF919HAZ 184341105 ENCODE Processing Pipeline fa3d34523f4b2390cbbcbdd0112dcc91 https://www.encodeproject.org/files/ENCFF844VWA/@@download/ENCFF844VWA.bigWig GRCh38 released mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, insufficient read depth, severe bottlenecking extremely low read depth, missing control alignments ENCFF720SBY bigWig fold change over control ENCSR000BKS ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 2 ENCFF919HAZ 91159091 ENCODE Processing Pipeline 6389a9be480db714ed08c5891e90a5df https://www.encodeproject.org/files/ENCFF720SBY/@@download/ENCFF720SBY.bigWig GRCh38 released mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, insufficient read depth, severe bottlenecking extremely low read depth, missing control alignments ENCFF078KNC bigWig fold change over control ENCSR000BKS ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1 ENCFF025QKV 76793426 ENCODE Processing Pipeline ddfb915094c75f49cd7e7551e5eb3571 https://www.encodeproject.org/files/ENCFF078KNC/@@download/ENCFF078KNC.bigWig GRCh38 released mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, insufficient read depth, severe bottlenecking extremely low read depth, missing control alignments ENCFF351VWV bigWig fold change over control ENCSR000BKS ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF025QKV, ENCFF919HAZ 153619321 ENCODE Processing Pipeline b4d29d301e76b90acfd4c48f5b44165f https://www.encodeproject.org/files/ENCFF351VWV/@@download/ENCFF351VWV.bigWig GRCh38 released mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, insufficient read depth, severe bottlenecking extremely low read depth, missing control alignments ENCFF760KTM bed narrowPeak peaks ENCSR000BKS ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF025QKV, ENCFF919HAZ 4565728 ENCODE Processing Pipeline 1a317530dbe1ef4c851ce2ce8fae8212 https://www.encodeproject.org/files/ENCFF760KTM/@@download/ENCFF760KTM.bed.gz GRCh38 released mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, insufficient read depth, severe bottlenecking extremely low read depth, missing control alignments ENCFF630IND bigBed narrowPeak peaks ENCSR000BKS ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1 ENCFF290PQH 5084958 ENCODE Processing Pipeline 2ac859b6fa95264c8ee011ccb5101e8b https://www.encodeproject.org/files/ENCFF630IND/@@download/ENCFF630IND.bigBed GRCh38 released mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, insufficient read depth, severe bottlenecking extremely low read depth, missing control alignments ENCFF290PQH bed narrowPeak peaks ENCSR000BKS ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1 ENCFF025QKV 2258635 ENCODE Processing Pipeline 4100b0aeb8295dfa020b3742d80b3620 https://www.encodeproject.org/files/ENCFF290PQH/@@download/ENCFF290PQH.bed.gz GRCh38 released mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, insufficient read depth, severe bottlenecking extremely low read depth, missing control alignments ENCFF637RHV bed narrowPeak peaks ENCSR000BKS ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 2 ENCFF919HAZ 2384040 ENCODE Processing Pipeline e8ed28288299a7392c8159d5619ae412 https://www.encodeproject.org/files/ENCFF637RHV/@@download/ENCFF637RHV.bed.gz GRCh38 released mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, insufficient read depth, severe bottlenecking extremely low read depth, missing control alignments ENCFF937JNR bed narrowPeak conservative idr thresholded peaks ENCSR000BKS ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF290PQH, ENCFF419RSJ, ENCFF637RHV, ENCFF760KTM 311356 ENCODE Processing Pipeline 7545ae3ad70aaff5881a8b832b325fea https://www.encodeproject.org/files/ENCFF937JNR/@@download/ENCFF937JNR.bed.gz GRCh38 released mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, insufficient read depth, severe bottlenecking extremely low read depth, missing control alignments ENCFF935LXU bigBed narrowPeak peaks ENCSR000BKS ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 2 ENCFF637RHV 5468578 ENCODE Processing Pipeline 53c3fa85d1b69660ef26aa19d562cc05 https://www.encodeproject.org/files/ENCFF935LXU/@@download/ENCFF935LXU.bigBed GRCh38 released mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, insufficient read depth, severe bottlenecking extremely low read depth, missing control alignments ENCFF980NYL bigBed narrowPeak peaks ENCSR000BKS ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF760KTM 9959021 ENCODE Processing Pipeline 2865f03c440f86c5200570cdf2aa5acb https://www.encodeproject.org/files/ENCFF980NYL/@@download/ENCFF980NYL.bigBed GRCh38 released mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, insufficient read depth, severe bottlenecking extremely low read depth, missing control alignments ENCFF286DCL bigBed narrowPeak conservative idr thresholded peaks ENCSR000BKS ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF937JNR 696181 ENCODE Processing Pipeline 977be24834deb59c453e79ec8239e754 https://www.encodeproject.org/files/ENCFF286DCL/@@download/ENCFF286DCL.bigBed GRCh38 released mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, insufficient read depth, severe bottlenecking extremely low read depth, missing control alignments ENCFF988QGG bigBed narrowPeak optimal idr thresholded peaks ENCSR000BKS ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF453TIB 709351 ENCODE Processing Pipeline 1e37852b8682d5c8c752cc4cacecfd0c https://www.encodeproject.org/files/ENCFF988QGG/@@download/ENCFF988QGG.bigBed GRCh38 released mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, insufficient read depth, severe bottlenecking extremely low read depth, missing control alignments ENCFF453TIB bed narrowPeak optimal idr thresholded peaks ENCSR000BKS ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF290PQH, ENCFF419RSJ, ENCFF637RHV, ENCFF760KTM 320021 ENCODE Processing Pipeline fb8f377ae4ee66faf20bbc08f92960dc https://www.encodeproject.org/files/ENCFF453TIB/@@download/ENCFF453TIB.bed.gz GRCh38 released mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, insufficient read depth, severe bottlenecking extremely low read depth, missing control alignments ENCFF779OEX bigWig signal p-value ENCSR000BKS ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1 ENCFF278YTL, ENCFF750MIM 180928802 ENCODE Processing Pipeline 26b27facb6951e3e4a186868cce003d6 https://www.encodeproject.org/files/ENCFF779OEX/@@download/ENCFF779OEX.bigWig hg19 released mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, insufficient read depth, severe bottlenecking extremely low read depth, missing control alignments ENCFF117OLU bigWig fold change over control ENCSR000BKS ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1 ENCFF278YTL, ENCFF750MIM 76711853 ENCODE Processing Pipeline fb297ba7d7d84fa0dc058bae2288d1da https://www.encodeproject.org/files/ENCFF117OLU/@@download/ENCFF117OLU.bigWig hg19 released mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, insufficient read depth, severe bottlenecking extremely low read depth, missing control alignments ENCFF865KYI bigWig signal p-value ENCSR000BKS ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 2 ENCFF077WPD, ENCFF750MIM 204482675 ENCODE Processing Pipeline d4c55cbd82de72601b67877cb559755e https://www.encodeproject.org/files/ENCFF865KYI/@@download/ENCFF865KYI.bigWig hg19 released mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, insufficient read depth, severe bottlenecking extremely low read depth, missing control alignments ENCFF392LPM bigWig signal p-value ENCSR000BKS ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF077WPD, ENCFF278YTL, ENCFF750MIM 204144324 ENCODE Processing Pipeline 5bd69438139883b50fa10734a5c2c4c0 https://www.encodeproject.org/files/ENCFF392LPM/@@download/ENCFF392LPM.bigWig hg19 released mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, insufficient read depth, severe bottlenecking extremely low read depth, missing control alignments ENCFF798EEM bigWig fold change over control ENCSR000BKS ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 2 ENCFF077WPD, ENCFF750MIM 89952452 ENCODE Processing Pipeline 0d341aa17be24ea1277698b72dc79d7f https://www.encodeproject.org/files/ENCFF798EEM/@@download/ENCFF798EEM.bigWig hg19 released mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, insufficient read depth, severe bottlenecking extremely low read depth, missing control alignments ENCFF488POX bigWig fold change over control ENCSR000BKS ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF077WPD, ENCFF278YTL, ENCFF750MIM 153211819 ENCODE Processing Pipeline 049b5c31b51a438ef9581f6fb59a2e5e https://www.encodeproject.org/files/ENCFF488POX/@@download/ENCFF488POX.bigWig hg19 released mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, insufficient read depth, severe bottlenecking extremely low read depth, missing control alignments ENCFF713KSL bed narrowPeak peaks ENCSR000BKS ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1 ENCFF278YTL, ENCFF750MIM 2290084 ENCODE Processing Pipeline af1c4a7aa3b4d0dfc348d3685a0b7c8b https://www.encodeproject.org/files/ENCFF713KSL/@@download/ENCFF713KSL.bed.gz hg19 released mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, insufficient read depth, severe bottlenecking extremely low read depth, missing control alignments ENCFF847XRL bed narrowPeak peaks ENCSR000BKS ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 2 ENCFF077WPD, ENCFF750MIM 2486166 ENCODE Processing Pipeline 33a6656245faca919822bdb778bb5af9 https://www.encodeproject.org/files/ENCFF847XRL/@@download/ENCFF847XRL.bed.gz hg19 released mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, insufficient read depth, severe bottlenecking extremely low read depth, missing control alignments ENCFF697OMD bed narrowPeak peaks ENCSR000BKS ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF077WPD, ENCFF278YTL, ENCFF750MIM 4578291 ENCODE Processing Pipeline b347556ef4467cbca18d807a75977bea https://www.encodeproject.org/files/ENCFF697OMD/@@download/ENCFF697OMD.bed.gz hg19 released mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, insufficient read depth, severe bottlenecking extremely low read depth, missing control alignments ENCFF182SUE bigBed narrowPeak peaks ENCSR000BKS ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1 ENCFF713KSL 5134241 ENCODE Processing Pipeline e67bc70a3d0de688703b23e16cac5af7 https://www.encodeproject.org/files/ENCFF182SUE/@@download/ENCFF182SUE.bigBed hg19 released mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, insufficient read depth, severe bottlenecking extremely low read depth, missing control alignments ENCFF862OGD bigBed narrowPeak peaks ENCSR000BKS ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 2 ENCFF847XRL 5591136 ENCODE Processing Pipeline 758387678d9633725f24f530b72c5970 https://www.encodeproject.org/files/ENCFF862OGD/@@download/ENCFF862OGD.bigBed hg19 released mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, insufficient read depth, severe bottlenecking extremely low read depth, missing control alignments ENCFF238SFQ bigBed narrowPeak peaks ENCSR000BKS ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF697OMD 9976324 ENCODE Processing Pipeline 4aa1365008169ae75072f3ed14f4695b https://www.encodeproject.org/files/ENCFF238SFQ/@@download/ENCFF238SFQ.bigBed hg19 released mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, insufficient read depth, severe bottlenecking extremely low read depth, missing control alignments ENCFF052NLP bed narrowPeak conservative idr thresholded peaks ENCSR000BKS ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF001TDO, ENCFF697OMD, ENCFF713KSL, ENCFF847XRL 313846 ENCODE Processing Pipeline e0f3ffe848d8e90231ec8e3bfa0f2da3 https://www.encodeproject.org/files/ENCFF052NLP/@@download/ENCFF052NLP.bed.gz hg19 released mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, insufficient read depth, severe bottlenecking extremely low read depth, missing control alignments ENCFF327XLK bigBed narrowPeak conservative idr thresholded peaks ENCSR000BKS ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF052NLP 698691 ENCODE Processing Pipeline ca18db0b5ddd20e853dc055e328f83e7 https://www.encodeproject.org/files/ENCFF327XLK/@@download/ENCFF327XLK.bigBed hg19 released mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, insufficient read depth, severe bottlenecking extremely low read depth, missing control alignments ENCFF822FWM bed narrowPeak optimal idr thresholded peaks ENCSR000BKS ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF001TDO, ENCFF697OMD, ENCFF713KSL, ENCFF847XRL 317644 ENCODE Processing Pipeline e0213c493c391ae380358cfc2d5a8490 https://www.encodeproject.org/files/ENCFF822FWM/@@download/ENCFF822FWM.bed.gz hg19 released mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, insufficient read depth, severe bottlenecking extremely low read depth, missing control alignments ENCFF889VHM bigBed narrowPeak optimal idr thresholded peaks ENCSR000BKS ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAF1-human ENCAB000ALM DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF822FWM 705515 ENCODE Processing Pipeline 27c742e177897ab7881bb4705e4b6362 https://www.encodeproject.org/files/ENCFF889VHM/@@download/ENCFF889VHM.bigBed hg19 released mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, insufficient read depth, severe bottlenecking extremely low read depth, missing control alignments ENCFF000YMM bam alignments ENCSR000EFU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ELK1-human ENCAB000AGB DNA see document see document False 2012-08-20 ENCODE 1 1 500450581 Michael Snyder, Stanford c30e1cc4e5b5c3caa0c8cbe9e7d5f573 https://www.encodeproject.org/files/ENCFF000YMM/@@download/ENCFF000YMM.bam hg19 archived low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample, duplicate lane review, missing derived_from ENCFF000YMN bigBed narrowPeak peaks ENCSR000EFU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ELK1-human ENCAB000AGB DNA see document see document False 2012-08-20 ENCODE ENCFF001VNB 888508 Michael Snyder, Stanford f26bf6d092006179a52ba12ea7453441 https://www.encodeproject.org/files/ENCFF000YMN/@@download/ENCFF000YMN.bigBed hg19 archived low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample, duplicate lane review ENCFF000YMO fastq reads ENCSR000EFU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ELK1-human ENCAB000AGB DNA see document see document False 2012-08-20 ENCODE 1 1 36 single-ended 958252255 Michael Snyder, Stanford 010beea37851a840f64f311453d5b6d2 https://www.encodeproject.org/files/ENCFF000YMO/@@download/ENCFF000YMO.fastq.gz Illumina Genome Analyzer /files/ENCFF000YRB/ released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample, duplicate lane review ENCFF000YMP bam alignments ENCSR000EFU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ELK1-human ENCAB000AGB DNA see document see document False 2012-08-20 ENCODE 2 1 369812191 Michael Snyder, Stanford 13273274672d4b23ae32a165b2ac02b7 https://www.encodeproject.org/files/ENCFF000YMP/@@download/ENCFF000YMP.bam hg19 archived low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample, duplicate lane review, missing derived_from ENCFF000YMR fastq reads ENCSR000EFU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ELK1-human ENCAB000AGB DNA see document see document False 2012-08-20 ENCODE 2 1 36 single-ended 711416435 Michael Snyder, Stanford 6f3c8c01db73da671d94d2b4f70758cd https://www.encodeproject.org/files/ENCFF000YMR/@@download/ENCFF000YMR.fastq.gz Illumina Genome Analyzer /files/ENCFF000YRB/ released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample, duplicate lane review ENCFF000YMT bigWig signal ENCSR000EFU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ELK1-human ENCAB000AGB DNA see document see document False 2012-08-20 ENCODE 347733118 Michael Snyder, Stanford 55cd71b1fac4c6ced81c159b7c90dd59 https://www.encodeproject.org/files/ENCFF000YMT/@@download/ENCFF000YMT.bigWig hg19 archived low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample, duplicate lane review, missing derived_from ENCFF001VNB bed narrowPeak peaks ENCSR000EFU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ELK1-human ENCAB000AGB DNA see document see document False 2012-08-20 ENCODE 359741 Michael Snyder, Stanford 13deddbf404a44f36b3ff0779b88f209 https://www.encodeproject.org/files/ENCFF001VNB/@@download/ENCFF001VNB.bed.gz hg19 archived low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample, duplicate lane review, missing derived_from ENCFF002CWO bed narrowPeak optimal idr thresholded peaks ENCSR000EFU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ELK1-human ENCAB000AGB DNA see document see document False 2012-08-20 ENCODE 71329 ENCODE Consortium Analysis Working Group 512f15c00d79972570f34a368bb388d7 https://www.encodeproject.org/files/ENCFF002CWO/@@download/ENCFF002CWO.bed.gz hg19 archived low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample, duplicate lane review, missing derived_from ENCFF697HTL bigBed narrowPeak optimal idr thresholded peaks ENCSR000EFU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ELK1-human ENCAB000AGB DNA see document see document False 2012-08-20 ENCODE ENCFF002CWO 217575 ENCODE Consortium eba299163a21a7c56a70ae42c84d8a55 https://www.encodeproject.org/files/ENCFF697HTL/@@download/ENCFF697HTL.bigBed hg19 archived low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample, duplicate lane review ENCFF865ISL bam alignments ENCSR000EFU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ELK1-human ENCAB000AGB DNA see document see document False 2012-08-20 ENCODE 2 36 ENCFF000YMR, ENCFF643CGH 555115405 ENCODE Processing Pipeline ecf32b2685e2bf95e6f8e12de6c2e56f https://www.encodeproject.org/files/ENCFF865ISL/@@download/ENCFF865ISL.bam GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample, duplicate lane review ENCFF818OUC bam unfiltered alignments ENCSR000EFU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ELK1-human ENCAB000AGB DNA see document see document False 2012-08-20 ENCODE 2 36 ENCFF000YMR, ENCFF643CGH 824711180 ENCODE Processing Pipeline 7b10ab798e3d5c5676a04ec5eb46e41d https://www.encodeproject.org/files/ENCFF818OUC/@@download/ENCFF818OUC.bam GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample, duplicate lane review ENCFF790WTE bam unfiltered alignments ENCSR000EFU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ELK1-human ENCAB000AGB DNA see document see document False 2012-08-20 ENCODE 1 36 ENCFF000YMO, ENCFF643CGH 1096471481 ENCODE Processing Pipeline 4572306a2546cec206d60e74047c7a93 https://www.encodeproject.org/files/ENCFF790WTE/@@download/ENCFF790WTE.bam GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample, duplicate lane review ENCFF554BLC bam alignments ENCSR000EFU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ELK1-human ENCAB000AGB DNA see document see document False 2012-08-20 ENCODE 1 36 ENCFF000YMO, ENCFF643CGH 743794253 ENCODE Processing Pipeline 75e43cd8754e723de81a5927a3d6229a https://www.encodeproject.org/files/ENCFF554BLC/@@download/ENCFF554BLC.bam GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample, duplicate lane review ENCFF265GRP bam alignments ENCSR000EFU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ELK1-human ENCAB000AGB DNA see document see document False 2012-08-20 ENCODE 2 36 ENCFF000YMR, ENCFF807MUK 555520343 ENCODE Processing Pipeline 1bfa7bf5cdf048121cf48d691d3d1ce3 https://www.encodeproject.org/files/ENCFF265GRP/@@download/ENCFF265GRP.bam hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample, duplicate lane review ENCFF446YAJ bam unfiltered alignments ENCSR000EFU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ELK1-human ENCAB000AGB DNA see document see document False 2012-08-20 ENCODE 1 36 ENCFF000YMO, ENCFF807MUK 1091577871 ENCODE Processing Pipeline 07908bba03b8e65f12b94258e618f91c https://www.encodeproject.org/files/ENCFF446YAJ/@@download/ENCFF446YAJ.bam hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample, duplicate lane review ENCFF054EPN bam unfiltered alignments ENCSR000EFU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ELK1-human ENCAB000AGB DNA see document see document False 2012-08-20 ENCODE 2 36 ENCFF000YMR, ENCFF807MUK 821163415 ENCODE Processing Pipeline 93b4406a742b037332def00d8eb2a785 https://www.encodeproject.org/files/ENCFF054EPN/@@download/ENCFF054EPN.bam hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample, duplicate lane review ENCFF526XKG bam alignments ENCSR000EFU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ELK1-human ENCAB000AGB DNA see document see document False 2012-08-20 ENCODE 1 36 ENCFF000YMO, ENCFF807MUK 744278179 ENCODE Processing Pipeline 4ef380229811029cc5057f1618f10485 https://www.encodeproject.org/files/ENCFF526XKG/@@download/ENCFF526XKG.bam hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample, duplicate lane review ENCFF048AAN bigWig signal p-value ENCSR000EFU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ELK1-human ENCAB000AGB DNA see document see document False 2012-08-20 ENCODE 1 ENCFF554BLC 432779207 ENCODE Processing Pipeline 14e241ac3816205ead918cac8853de44 https://www.encodeproject.org/files/ENCFF048AAN/@@download/ENCFF048AAN.bigWig GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample, duplicate lane review ENCFF043UTO bigWig signal p-value ENCSR000EFU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ELK1-human ENCAB000AGB DNA see document see document False 2012-08-20 ENCODE 2 ENCFF865ISL 407660953 ENCODE Processing Pipeline 2382da8fdc5eded3cc9e7f4da9a2f2f9 https://www.encodeproject.org/files/ENCFF043UTO/@@download/ENCFF043UTO.bigWig GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample, duplicate lane review ENCFF159XBB bigWig signal p-value ENCSR000EFU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ELK1-human ENCAB000AGB DNA see document see document False 2012-08-20 ENCODE 1, 2 ENCFF554BLC, ENCFF865ISL 579955982 ENCODE Processing Pipeline 51a6398277c0828aa5795fefd6977066 https://www.encodeproject.org/files/ENCFF159XBB/@@download/ENCFF159XBB.bigWig GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample, duplicate lane review ENCFF399BIF bigWig fold change over control ENCSR000EFU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ELK1-human ENCAB000AGB DNA see document see document False 2012-08-20 ENCODE 1 ENCFF554BLC 423193632 ENCODE Processing Pipeline 2eabc6fab902369754941dbb2e31e596 https://www.encodeproject.org/files/ENCFF399BIF/@@download/ENCFF399BIF.bigWig GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample, duplicate lane review ENCFF539COR bigWig fold change over control ENCSR000EFU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ELK1-human ENCAB000AGB DNA see document see document False 2012-08-20 ENCODE 2 ENCFF865ISL 301963669 ENCODE Processing Pipeline 718260c5a4c4f11aca509521cefc08a3 https://www.encodeproject.org/files/ENCFF539COR/@@download/ENCFF539COR.bigWig GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample, duplicate lane review ENCFF527ABX bed narrowPeak peaks ENCSR000EFU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ELK1-human ENCAB000AGB DNA see document see document False 2012-08-20 ENCODE 2 ENCFF865ISL 4509736 ENCODE Processing Pipeline 66eefbd3751f3d1402300be2c6214cbb https://www.encodeproject.org/files/ENCFF527ABX/@@download/ENCFF527ABX.bed.gz GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample, duplicate lane review ENCFF453ZWL bed narrowPeak peaks ENCSR000EFU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ELK1-human ENCAB000AGB DNA see document see document False 2012-08-20 ENCODE 1, 2 ENCFF554BLC, ENCFF865ISL 5324611 ENCODE Processing Pipeline 12e35e15b4a5b53ffbf56298ee356030 https://www.encodeproject.org/files/ENCFF453ZWL/@@download/ENCFF453ZWL.bed.gz GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample, duplicate lane review ENCFF382JSK bed narrowPeak peaks ENCSR000EFU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ELK1-human ENCAB000AGB DNA see document see document False 2012-08-20 ENCODE 1 ENCFF554BLC 4589062 ENCODE Processing Pipeline f115a49b163b4a1f690e46e00603fe40 https://www.encodeproject.org/files/ENCFF382JSK/@@download/ENCFF382JSK.bed.gz GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample, duplicate lane review ENCFF792ZTJ bigWig fold change over control ENCSR000EFU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ELK1-human ENCAB000AGB DNA see document see document False 2012-08-20 ENCODE 1, 2 ENCFF554BLC, ENCFF865ISL 618801315 ENCODE Processing Pipeline 5b87cb35c1cc8e4d33afeb311f1ccb17 https://www.encodeproject.org/files/ENCFF792ZTJ/@@download/ENCFF792ZTJ.bigWig GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample, duplicate lane review ENCFF037FXU bigBed narrowPeak peaks ENCSR000EFU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ELK1-human ENCAB000AGB DNA see document see document False 2012-08-20 ENCODE 1, 2 ENCFF453ZWL 11134850 ENCODE Processing Pipeline 7edc6965743cd3d3102e227f497a9faf https://www.encodeproject.org/files/ENCFF037FXU/@@download/ENCFF037FXU.bigBed GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample, duplicate lane review ENCFF126VVH bigBed narrowPeak conservative idr thresholded peaks ENCSR000EFU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ELK1-human ENCAB000AGB DNA see document see document False 2012-08-20 ENCODE 1, 2 ENCFF408WSW 192542 ENCODE Processing Pipeline 11544024b8624ad6b1dfb21e1f682970 https://www.encodeproject.org/files/ENCFF126VVH/@@download/ENCFF126VVH.bigBed GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample, duplicate lane review ENCFF059CYV bigBed narrowPeak optimal idr thresholded peaks ENCSR000EFU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ELK1-human ENCAB000AGB DNA see document see document False 2012-08-20 ENCODE 1, 2 ENCFF119SCQ 199350 ENCODE Processing Pipeline 5430213aeb9f28faec7164271d8bb840 https://www.encodeproject.org/files/ENCFF059CYV/@@download/ENCFF059CYV.bigBed GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample, duplicate lane review ENCFF125BWZ bigBed narrowPeak peaks ENCSR000EFU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ELK1-human ENCAB000AGB DNA see document see document False 2012-08-20 ENCODE 1 ENCFF382JSK 10926729 ENCODE Processing Pipeline b0d284af1d037ea0bc74087f19e9fcaa https://www.encodeproject.org/files/ENCFF125BWZ/@@download/ENCFF125BWZ.bigBed GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample, duplicate lane review ENCFF193DTL bigBed narrowPeak peaks ENCSR000EFU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ELK1-human ENCAB000AGB DNA see document see document False 2012-08-20 ENCODE 2 ENCFF527ABX 10597056 ENCODE Processing Pipeline a12ccea55a8cf1086add389f9ff91671 https://www.encodeproject.org/files/ENCFF193DTL/@@download/ENCFF193DTL.bigBed GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample, duplicate lane review ENCFF119SCQ bed narrowPeak optimal idr thresholded peaks ENCSR000EFU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ELK1-human ENCAB000AGB DNA see document see document False 2012-08-20 ENCODE 1, 2 ENCFF382JSK, ENCFF419RSJ, ENCFF453ZWL, ENCFF527ABX 72970 ENCODE Processing Pipeline d5791bd9656128411f3090b76911951b https://www.encodeproject.org/files/ENCFF119SCQ/@@download/ENCFF119SCQ.bed.gz GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample, duplicate lane review ENCFF408WSW bed narrowPeak conservative idr thresholded peaks ENCSR000EFU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ELK1-human ENCAB000AGB DNA see document see document False 2012-08-20 ENCODE 1, 2 ENCFF382JSK, ENCFF419RSJ, ENCFF453ZWL, ENCFF527ABX 68263 ENCODE Processing Pipeline 2708307466f54122c6613b2fe38486ec https://www.encodeproject.org/files/ENCFF408WSW/@@download/ENCFF408WSW.bed.gz GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample, duplicate lane review ENCFF269XAX bigBed narrowPeak peaks ENCSR000EFU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ELK1-human ENCAB000AGB DNA see document see document False 2012-08-20 ENCODE 2 ENCFF324CAS 10605353 ENCODE Processing Pipeline 0da749e4c4f536372c8624f670049bff https://www.encodeproject.org/files/ENCFF269XAX/@@download/ENCFF269XAX.bigBed hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample, duplicate lane review ENCFF019PEL bed narrowPeak optimal idr thresholded peaks ENCSR000EFU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ELK1-human ENCAB000AGB DNA see document see document False 2012-08-20 ENCODE 1, 2 ENCFF001TDO, ENCFF324CAS, ENCFF390VNW, ENCFF670YGF 72723 ENCODE Processing Pipeline 6bef1c87b6be232eb240e302cc14670d https://www.encodeproject.org/files/ENCFF019PEL/@@download/ENCFF019PEL.bed.gz hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample, duplicate lane review ENCFF390VNW bed narrowPeak peaks ENCSR000EFU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ELK1-human ENCAB000AGB DNA see document see document False 2012-08-20 ENCODE 1, 2 ENCFF265GRP, ENCFF526XKG, ENCFF710NTS 5448041 ENCODE Processing Pipeline bf008e4c9b2739fea71918698f2b93dc https://www.encodeproject.org/files/ENCFF390VNW/@@download/ENCFF390VNW.bed.gz hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample, duplicate lane review ENCFF125SMN bigBed narrowPeak optimal idr thresholded peaks ENCSR000EFU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ELK1-human ENCAB000AGB DNA see document see document False 2012-08-20 ENCODE 1, 2 ENCFF019PEL 197779 ENCODE Processing Pipeline 3309c66c917a756c3d6f1a7b0432ac90 https://www.encodeproject.org/files/ENCFF125SMN/@@download/ENCFF125SMN.bigBed hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample, duplicate lane review ENCFF996CPV bigWig fold change over control ENCSR000EFU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ELK1-human ENCAB000AGB DNA see document see document False 2012-08-20 ENCODE 1, 2 ENCFF265GRP, ENCFF526XKG, ENCFF710NTS 603648276 ENCODE Processing Pipeline 6f3f0a3072c084e5c938b3333a63addf https://www.encodeproject.org/files/ENCFF996CPV/@@download/ENCFF996CPV.bigWig hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample, duplicate lane review ENCFF122KXZ bigWig signal p-value ENCSR000EFU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ELK1-human ENCAB000AGB DNA see document see document False 2012-08-20 ENCODE 1 ENCFF526XKG, ENCFF710NTS 545291309 ENCODE Processing Pipeline 0764bc54f4a37256452bb8991751832e https://www.encodeproject.org/files/ENCFF122KXZ/@@download/ENCFF122KXZ.bigWig hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample, duplicate lane review ENCFF224TRP bigWig signal p-value ENCSR000EFU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ELK1-human ENCAB000AGB DNA see document see document False 2012-08-20 ENCODE 2 ENCFF265GRP, ENCFF710NTS 504900323 ENCODE Processing Pipeline e90cbd9a336b73426266158e7cdae6b3 https://www.encodeproject.org/files/ENCFF224TRP/@@download/ENCFF224TRP.bigWig hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample, duplicate lane review ENCFF519LUE bed narrowPeak conservative idr thresholded peaks ENCSR000EFU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ELK1-human ENCAB000AGB DNA see document see document False 2012-08-20 ENCODE 1, 2 ENCFF001TDO, ENCFF324CAS, ENCFF390VNW, ENCFF670YGF 67367 ENCODE Processing Pipeline 2a9925402b69e9bab5c1fa959eb352fb https://www.encodeproject.org/files/ENCFF519LUE/@@download/ENCFF519LUE.bed.gz hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample, duplicate lane review ENCFF218ZOH bigWig fold change over control ENCSR000EFU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ELK1-human ENCAB000AGB DNA see document see document False 2012-08-20 ENCODE 1 ENCFF526XKG, ENCFF710NTS 414655231 ENCODE Processing Pipeline be6d1c2db598d42fd2935c8d188e9228 https://www.encodeproject.org/files/ENCFF218ZOH/@@download/ENCFF218ZOH.bigWig hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample, duplicate lane review ENCFF390PFQ bigWig signal p-value ENCSR000EFU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ELK1-human ENCAB000AGB DNA see document see document False 2012-08-20 ENCODE 1, 2 ENCFF265GRP, ENCFF526XKG, ENCFF710NTS 540733209 ENCODE Processing Pipeline 3820bd078f312ceb64ee8ed44dab76c6 https://www.encodeproject.org/files/ENCFF390PFQ/@@download/ENCFF390PFQ.bigWig hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample, duplicate lane review ENCFF159SMP bigWig fold change over control ENCSR000EFU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ELK1-human ENCAB000AGB DNA see document see document False 2012-08-20 ENCODE 2 ENCFF265GRP, ENCFF710NTS 299684083 ENCODE Processing Pipeline c5a2266c138f7e438754fc53b2285d9e https://www.encodeproject.org/files/ENCFF159SMP/@@download/ENCFF159SMP.bigWig hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample, duplicate lane review ENCFF670YGF bed narrowPeak peaks ENCSR000EFU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ELK1-human ENCAB000AGB DNA see document see document False 2012-08-20 ENCODE 1 ENCFF526XKG, ENCFF710NTS 4642099 ENCODE Processing Pipeline 24a9177cb658f07a69141642ad4c3cf1 https://www.encodeproject.org/files/ENCFF670YGF/@@download/ENCFF670YGF.bed.gz hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample, duplicate lane review ENCFF324CAS bed narrowPeak peaks ENCSR000EFU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ELK1-human ENCAB000AGB DNA see document see document False 2012-08-20 ENCODE 2 ENCFF265GRP, ENCFF710NTS 4508322 ENCODE Processing Pipeline ddf087dc114613cea7315d513568c461 https://www.encodeproject.org/files/ENCFF324CAS/@@download/ENCFF324CAS.bed.gz hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample, duplicate lane review ENCFF987UZL bigBed narrowPeak peaks ENCSR000EFU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ELK1-human ENCAB000AGB DNA see document see document False 2012-08-20 ENCODE 1 ENCFF670YGF 10954408 ENCODE Processing Pipeline ab0cb498658f4fa938fb5ed83e54c5ae https://www.encodeproject.org/files/ENCFF987UZL/@@download/ENCFF987UZL.bigBed hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample, duplicate lane review ENCFF612RYQ bigBed narrowPeak peaks ENCSR000EFU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ELK1-human ENCAB000AGB DNA see document see document False 2012-08-20 ENCODE 1, 2 ENCFF390VNW 11139773 ENCODE Processing Pipeline 4bedbd9dee1cf2a1cd2b0c549b9a2d75 https://www.encodeproject.org/files/ENCFF612RYQ/@@download/ENCFF612RYQ.bigBed hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample, duplicate lane review ENCFF096VSI bigBed narrowPeak conservative idr thresholded peaks ENCSR000EFU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ELK1-human ENCAB000AGB DNA see document see document False 2012-08-20 ENCODE 1, 2 ENCFF519LUE 189189 ENCODE Processing Pipeline c5ba21e1bb4e6166a77a696842439554 https://www.encodeproject.org/files/ENCFF096VSI/@@download/ENCFF096VSI.bigBed hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample, duplicate lane review ENCFF726XZG bam unfiltered alignments ENCSR648INT ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ILK-human ENCAB728YTO DNA False 2016-02-16 ENCODE 2 100 ENCFF007IDQ, ENCFF807MUK, ENCFF908PTR 7112727804 ENCODE Processing Pipeline 3bb46e8606bcfa08451abc5e6a54a936 https://www.encodeproject.org/files/ENCFF726XZG/@@download/ENCFF726XZG.bam hg19 released low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF851AHS bam unfiltered alignments ENCSR648INT ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ILK-human ENCAB728YTO DNA False 2016-02-16 ENCODE 1 100 ENCFF188LAZ, ENCFF395XDN, ENCFF807MUK 4458599939 ENCODE Processing Pipeline 10f9b8f5b9618517b33135f21dda37d4 https://www.encodeproject.org/files/ENCFF851AHS/@@download/ENCFF851AHS.bam hg19 released low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF007IDQ fastq reads ENCSR648INT ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ILK-human ENCAB728YTO DNA False 2016-02-16 ENCODE 2 1 100 paired-ended 2 ENCFF908PTR 3456321995 Michael Snyder, Stanford 611ad5965de09e9c501593edaebc14e9 SRA:SRR5112082 https://www.encodeproject.org/files/ENCFF007IDQ/@@download/ENCFF007IDQ.fastq.gz Illumina HiSeq 2000 /files/ENCFF904LUM/ released low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF188LAZ fastq reads ENCSR648INT ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ILK-human ENCAB728YTO DNA False 2016-02-16 ENCODE 1 1 100 paired-ended 2 ENCFF395XDN 2111523731 Michael Snyder, Stanford d794d18c533718e20043660e4c916935 SRA:SRR5112083 https://www.encodeproject.org/files/ENCFF188LAZ/@@download/ENCFF188LAZ.fastq.gz Illumina HiSeq 2000 /files/ENCFF904LUM/ released low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF908PTR fastq reads ENCSR648INT ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ILK-human ENCAB728YTO DNA False 2016-02-16 ENCODE 2 1 100 paired-ended 1 ENCFF007IDQ 3507817077 Michael Snyder, Stanford 3eeed5f684e16dc68ff736cd31008e4e SRA:SRR5112082 https://www.encodeproject.org/files/ENCFF908PTR/@@download/ENCFF908PTR.fastq.gz Illumina HiSeq 2000 /files/ENCFF823MCH/ released low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF395XDN fastq reads ENCSR648INT ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ILK-human ENCAB728YTO DNA False 2016-02-16 ENCODE 1 1 100 paired-ended 1 ENCFF188LAZ 2009116309 Michael Snyder, Stanford 1b49a458f1a3eb9cda8442768ae67941 SRA:SRR5112083 https://www.encodeproject.org/files/ENCFF395XDN/@@download/ENCFF395XDN.fastq.gz Illumina HiSeq 2000 /files/ENCFF823MCH/ released low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF234PKC bam alignments ENCSR648INT ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ILK-human ENCAB728YTO DNA False 2016-02-16 ENCODE 2 100 ENCFF007IDQ, ENCFF807MUK, ENCFF908PTR 4257403127 ENCODE Processing Pipeline 68278ca4565ff0cd63eb1a50304ff51c https://www.encodeproject.org/files/ENCFF234PKC/@@download/ENCFF234PKC.bam hg19 released low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF676IGA bam alignments ENCSR648INT ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ILK-human ENCAB728YTO DNA False 2016-02-16 ENCODE 1 100 ENCFF188LAZ, ENCFF395XDN, ENCFF807MUK 3267407979 ENCODE Processing Pipeline 02e14b03ccc5fa0fb50b80d9d1efd8fa https://www.encodeproject.org/files/ENCFF676IGA/@@download/ENCFF676IGA.bam hg19 released low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF192BQU bigWig fold change over control ENCSR648INT ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ILK-human ENCAB728YTO DNA False 2016-02-16 ENCODE 1, 2 ENCFF234PKC, ENCFF676IGA, ENCFF985LZI 1453561836 ENCODE Processing Pipeline f977f721a1704262f0f380c9e3c72f75 https://www.encodeproject.org/files/ENCFF192BQU/@@download/ENCFF192BQU.bigWig hg19 released low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF576SVU bigWig fold change over control ENCSR648INT ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ILK-human ENCAB728YTO DNA False 2016-02-16 ENCODE 2 ENCFF234PKC, ENCFF985LZI 1017810690 ENCODE Processing Pipeline 996bc02dd28d459cf6699d99090262ac https://www.encodeproject.org/files/ENCFF576SVU/@@download/ENCFF576SVU.bigWig hg19 released low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF591AAC bigBed narrowPeak peaks ENCSR648INT ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ILK-human ENCAB728YTO DNA False 2016-02-16 ENCODE 1, 2 ENCFF847LIB 11262341 ENCODE Processing Pipeline 84c43f1cec5e01fadb2eb29081ad149e https://www.encodeproject.org/files/ENCFF591AAC/@@download/ENCFF591AAC.bigBed hg19 released low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF355IZF bigWig signal p-value ENCSR648INT ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ILK-human ENCAB728YTO DNA False 2016-02-16 ENCODE 1 ENCFF676IGA, ENCFF985LZI 1073448006 ENCODE Processing Pipeline eec5e23453cbe3c5e9ca5b00d13e9b29 https://www.encodeproject.org/files/ENCFF355IZF/@@download/ENCFF355IZF.bigWig hg19 released low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF381OFM bigWig signal p-value ENCSR648INT ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ILK-human ENCAB728YTO DNA False 2016-02-16 ENCODE 2 ENCFF234PKC, ENCFF985LZI 1062919427 ENCODE Processing Pipeline c85573c969f7a4cf415fbd0aace38901 https://www.encodeproject.org/files/ENCFF381OFM/@@download/ENCFF381OFM.bigWig hg19 released low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF013TZM bigWig signal p-value ENCSR648INT ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ILK-human ENCAB728YTO DNA False 2016-02-16 ENCODE 1, 2 ENCFF234PKC, ENCFF676IGA, ENCFF985LZI 1256506709 ENCODE Processing Pipeline 78615de49c3c546b424b88c864019563 https://www.encodeproject.org/files/ENCFF013TZM/@@download/ENCFF013TZM.bigWig hg19 released low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF334GZR bigWig fold change over control ENCSR648INT ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ILK-human ENCAB728YTO DNA False 2016-02-16 ENCODE 1 ENCFF676IGA, ENCFF985LZI 915722706 ENCODE Processing Pipeline c17818f958633ba16fc829a20a3da5f1 https://www.encodeproject.org/files/ENCFF334GZR/@@download/ENCFF334GZR.bigWig hg19 released low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF207HZD bed narrowPeak peaks ENCSR648INT ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ILK-human ENCAB728YTO DNA False 2016-02-16 ENCODE 2 ENCFF234PKC, ENCFF985LZI 5649743 ENCODE Processing Pipeline 0555764c4566ad7d32c7afc448d29081 https://www.encodeproject.org/files/ENCFF207HZD/@@download/ENCFF207HZD.bed.gz hg19 released low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF237JZC bed narrowPeak peaks ENCSR648INT ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ILK-human ENCAB728YTO DNA False 2016-02-16 ENCODE 1 ENCFF676IGA, ENCFF985LZI 6000653 ENCODE Processing Pipeline f7838b40ca9c0c92219e84adafab3aea https://www.encodeproject.org/files/ENCFF237JZC/@@download/ENCFF237JZC.bed.gz hg19 released low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF847LIB bed narrowPeak peaks ENCSR648INT ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ILK-human ENCAB728YTO DNA False 2016-02-16 ENCODE 1, 2 ENCFF234PKC, ENCFF676IGA, ENCFF985LZI 6916136 ENCODE Processing Pipeline d052289690e58a3e229ff0818d4dd73f https://www.encodeproject.org/files/ENCFF847LIB/@@download/ENCFF847LIB.bed.gz hg19 released low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF912ZSS bigBed narrowPeak peaks ENCSR648INT ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ILK-human ENCAB728YTO DNA False 2016-02-16 ENCODE 1 ENCFF237JZC 11267049 ENCODE Processing Pipeline 289aba0505ec24d60a9d43ae5c844ddb https://www.encodeproject.org/files/ENCFF912ZSS/@@download/ENCFF912ZSS.bigBed hg19 released low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF939OXK bigBed narrowPeak peaks ENCSR648INT ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ILK-human ENCAB728YTO DNA False 2016-02-16 ENCODE 2 ENCFF207HZD 11355927 ENCODE Processing Pipeline cda9db3207125ff82380b71eba39a47f https://www.encodeproject.org/files/ENCFF939OXK/@@download/ENCFF939OXK.bigBed hg19 released low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF751PQV bam unfiltered alignments ENCSR648INT ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ILK-human ENCAB728YTO DNA False 2016-02-16 ENCODE 1 100 ENCFF188LAZ, ENCFF395XDN, ENCFF643CGH 4465066100 ENCODE Processing Pipeline c78732ffdeaff2c99f2f718f48ab4400 https://www.encodeproject.org/files/ENCFF751PQV/@@download/ENCFF751PQV.bam GRCh38 released low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF821DYA bam unfiltered alignments ENCSR648INT ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ILK-human ENCAB728YTO DNA False 2016-02-16 ENCODE 2 100 ENCFF007IDQ, ENCFF643CGH, ENCFF908PTR 7117445107 ENCODE Processing Pipeline b8cd4fc57ff4b718984d7bab1e70e0d3 https://www.encodeproject.org/files/ENCFF821DYA/@@download/ENCFF821DYA.bam GRCh38 released low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF145ZDW bam alignments ENCSR648INT ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ILK-human ENCAB728YTO DNA False 2016-02-16 ENCODE 1 100 ENCFF188LAZ, ENCFF395XDN, ENCFF643CGH 3267556444 ENCODE Processing Pipeline 38a76ba75ff5459d7142a578a5af50ff https://www.encodeproject.org/files/ENCFF145ZDW/@@download/ENCFF145ZDW.bam GRCh38 released low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF831ODM bam alignments ENCSR648INT ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ILK-human ENCAB728YTO DNA False 2016-02-16 ENCODE 2 100 ENCFF007IDQ, ENCFF643CGH, ENCFF908PTR 4257559729 ENCODE Processing Pipeline b249037efa59f654d9e05f33aed0c47b https://www.encodeproject.org/files/ENCFF831ODM/@@download/ENCFF831ODM.bam GRCh38 released low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF221TLG bigWig signal p-value ENCSR648INT ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ILK-human ENCAB728YTO DNA False 2016-02-16 ENCODE 1 ENCFF073AHU, ENCFF145ZDW 846322977 ENCODE Processing Pipeline 51b0f73afcf7281d21382a1006941494 https://www.encodeproject.org/files/ENCFF221TLG/@@download/ENCFF221TLG.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF576BHM bigWig signal p-value ENCSR648INT ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ILK-human ENCAB728YTO DNA False 2016-02-16 ENCODE 2 ENCFF073AHU, ENCFF831ODM 1084244825 ENCODE Processing Pipeline 65e32c4e86bba892f4b6e73cb7928131 https://www.encodeproject.org/files/ENCFF576BHM/@@download/ENCFF576BHM.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF332LET bigWig signal p-value ENCSR648INT ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ILK-human ENCAB728YTO DNA False 2016-02-16 ENCODE 1, 2 ENCFF073AHU, ENCFF145ZDW, ENCFF831ODM 1285769095 ENCODE Processing Pipeline ba7f10f9a222aab45cb7647fb2de32fc https://www.encodeproject.org/files/ENCFF332LET/@@download/ENCFF332LET.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF689XFL bigWig fold change over control ENCSR648INT ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ILK-human ENCAB728YTO DNA False 2016-02-16 ENCODE 1 ENCFF073AHU, ENCFF145ZDW 921703278 ENCODE Processing Pipeline 259c47e98c29bb4587b6e2cb603cba2b https://www.encodeproject.org/files/ENCFF689XFL/@@download/ENCFF689XFL.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF413FFH bigWig fold change over control ENCSR648INT ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ILK-human ENCAB728YTO DNA False 2016-02-16 ENCODE 2 ENCFF073AHU, ENCFF831ODM 1019823492 ENCODE Processing Pipeline abd19556c02bf74e4cd3f8f957841a95 https://www.encodeproject.org/files/ENCFF413FFH/@@download/ENCFF413FFH.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF524GCL bigWig fold change over control ENCSR648INT ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ILK-human ENCAB728YTO DNA False 2016-02-16 ENCODE 1, 2 ENCFF073AHU, ENCFF145ZDW, ENCFF831ODM 1483895499 ENCODE Processing Pipeline 91241af47e1fe35b52166869c51134c9 https://www.encodeproject.org/files/ENCFF524GCL/@@download/ENCFF524GCL.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF815TNI bed narrowPeak peaks ENCSR648INT ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ILK-human ENCAB728YTO DNA False 2016-02-16 ENCODE 1 ENCFF073AHU, ENCFF145ZDW 5828660 ENCODE Processing Pipeline 8628529ccd9cd40f8b96c13392a4280e https://www.encodeproject.org/files/ENCFF815TNI/@@download/ENCFF815TNI.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF319NMP bigBed narrowPeak peaks ENCSR648INT ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ILK-human ENCAB728YTO DNA False 2016-02-16 ENCODE 1 ENCFF815TNI 11259512 ENCODE Processing Pipeline 99a2cc7cc109a687328253301f1019b6 https://www.encodeproject.org/files/ENCFF319NMP/@@download/ENCFF319NMP.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF710PCL bed narrowPeak peaks ENCSR648INT ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ILK-human ENCAB728YTO DNA False 2016-02-16 ENCODE 2 ENCFF073AHU, ENCFF831ODM 5444826 ENCODE Processing Pipeline cd76b7fcb1b066a9e83fed26e74e1c12 https://www.encodeproject.org/files/ENCFF710PCL/@@download/ENCFF710PCL.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF965NQP bed narrowPeak peaks ENCSR648INT ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ILK-human ENCAB728YTO DNA False 2016-02-16 ENCODE 1, 2 ENCFF073AHU, ENCFF145ZDW, ENCFF831ODM 6821495 ENCODE Processing Pipeline e9d4990980cff212b3b411ac10fbea3e https://www.encodeproject.org/files/ENCFF965NQP/@@download/ENCFF965NQP.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF872BHX bigBed narrowPeak peaks ENCSR648INT ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ILK-human ENCAB728YTO DNA False 2016-02-16 ENCODE 1, 2 ENCFF965NQP 11277503 ENCODE Processing Pipeline d99bf24c99fa580046b27c9c9a76927a https://www.encodeproject.org/files/ENCFF872BHX/@@download/ENCFF872BHX.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF392HUT bigBed narrowPeak peaks ENCSR648INT ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ILK-human ENCAB728YTO DNA False 2016-02-16 ENCODE 2 ENCFF710PCL 11333978 ENCODE Processing Pipeline 3034092d58e4d597aea42dc0a1ee46c3 https://www.encodeproject.org/files/ENCFF392HUT/@@download/ENCFF392HUT.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF491MEQ bigBed narrowPeak conservative idr thresholded peaks ENCSR648INT ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ILK-human ENCAB728YTO DNA False 2016-02-16 ENCODE 1, 2 ENCFF036PCO 97605 ENCODE Processing Pipeline add6e2d40a95ccebe472c237805388a8 https://www.encodeproject.org/files/ENCFF491MEQ/@@download/ENCFF491MEQ.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF036PCO bed narrowPeak conservative idr thresholded peaks ENCSR648INT ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ILK-human ENCAB728YTO DNA False 2016-02-16 ENCODE 1, 2 ENCFF419RSJ, ENCFF710PCL, ENCFF815TNI, ENCFF965NQP 24243 ENCODE Processing Pipeline d233df216776f5a7b3027037942b7d5e https://www.encodeproject.org/files/ENCFF036PCO/@@download/ENCFF036PCO.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF882OXO bigBed narrowPeak optimal idr thresholded peaks ENCSR648INT ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ILK-human ENCAB728YTO DNA False 2016-02-16 ENCODE 1, 2 ENCFF406XWT 125967 ENCODE Processing Pipeline 739291e2a72c565cb98d8d210c49cce5 https://www.encodeproject.org/files/ENCFF882OXO/@@download/ENCFF882OXO.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF406XWT bed narrowPeak optimal idr thresholded peaks ENCSR648INT ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ILK-human ENCAB728YTO DNA False 2016-02-16 ENCODE 1, 2 ENCFF419RSJ, ENCFF710PCL, ENCFF815TNI, ENCFF965NQP 42946 ENCODE Processing Pipeline a785b0ab3b99263face2d00adc1c5c70 https://www.encodeproject.org/files/ENCFF406XWT/@@download/ENCFF406XWT.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF967QZK bigBed narrowPeak conservative idr thresholded peaks ENCSR648INT ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ILK-human ENCAB728YTO DNA False 2016-02-16 ENCODE 1, 2 ENCFF719RTA 76518 ENCODE Processing Pipeline c0204e23e53e94979f7bf7e584f481b3 https://www.encodeproject.org/files/ENCFF967QZK/@@download/ENCFF967QZK.bigBed hg19 released low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF719RTA bed narrowPeak conservative idr thresholded peaks ENCSR648INT ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ILK-human ENCAB728YTO DNA False 2016-02-16 ENCODE 1, 2 ENCFF001TDO, ENCFF207HZD, ENCFF237JZC, ENCFF847LIB 20640 ENCODE Processing Pipeline 56cb9e83967cb122600b574351b9c3dd https://www.encodeproject.org/files/ENCFF719RTA/@@download/ENCFF719RTA.bed.gz hg19 released low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF176NOI bed narrowPeak optimal idr thresholded peaks ENCSR648INT ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ILK-human ENCAB728YTO DNA False 2016-02-16 ENCODE 1, 2 ENCFF001TDO, ENCFF207HZD, ENCFF237JZC, ENCFF847LIB 36606 ENCODE Processing Pipeline 607bb4cf8872522d66cec5314f6ad991 https://www.encodeproject.org/files/ENCFF176NOI/@@download/ENCFF176NOI.bed.gz hg19 released low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF678WRF bigBed narrowPeak optimal idr thresholded peaks ENCSR648INT ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ILK-human ENCAB728YTO DNA False 2016-02-16 ENCODE 1, 2 ENCFF176NOI 115123 ENCODE Processing Pipeline 1de6c384a54e7ec0c5c324861fe9cb26 https://www.encodeproject.org/files/ENCFF678WRF/@@download/ENCFF678WRF.bigBed hg19 released low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF000PZZ bam alignments ENCSR000BMV ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOSL1-human ENCAB000AGJ DNA see document see document False 2011-07-18 ENCODE 1 ENCFF000QAL 765319059 Richard Myers, HAIB ddbd54812e5794dd62ef758618e09655 https://www.encodeproject.org/files/ENCFF000PZZ/@@download/ENCFF000PZZ.bam hg19 archived low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF000QAA bigBed broadPeak peaks ENCSR000BMV ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOSL1-human ENCAB000AGJ DNA see document see document False 2011-07-18 ENCODE 1 1 ENCFF001UJX 254343 Richard Myers, HAIB 1cc8f51d4a8523fe7081203f0e901ee0 https://www.encodeproject.org/files/ENCFF000QAA/@@download/ENCFF000QAA.bigBed hg19 archived low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF000QAB bigBed broadPeak peaks ENCSR000BMV ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOSL1-human ENCAB000AGJ DNA see document see document False 2011-07-18 ENCODE 2 1 ENCFF001UJY 226367 Richard Myers, HAIB 172d412d09e5e88ea05bb67090d76a88 https://www.encodeproject.org/files/ENCFF000QAB/@@download/ENCFF000QAB.bigBed hg19 archived low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF000QAC bam alignments ENCSR000BMV ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOSL1-human ENCAB000AGJ DNA see document see document False 2011-07-18 ENCODE 2 ENCFF000QAN 933796196 Richard Myers, HAIB 208677645a984da9a2786a5047116511 https://www.encodeproject.org/files/ENCFF000QAC/@@download/ENCFF000QAC.bam hg19 archived low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF000QAE bigWig raw signal ENCSR000BMV ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOSL1-human ENCAB000AGJ DNA see document see document False 2011-07-18 ENCODE 1 1 13856974 Richard Myers, HAIB c3f1ec2ea509ea10a26ace4aa4aa5326 https://www.encodeproject.org/files/ENCFF000QAE/@@download/ENCFF000QAE.bigWig hg19 archived low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample, missing derived_from control insufficient read depth ENCFF000QAF bigWig raw signal ENCSR000BMV ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOSL1-human ENCAB000AGJ DNA see document see document False 2011-07-18 ENCODE 2 1 16661535 Richard Myers, HAIB 16cf0813795ad87258524073682a6c95 https://www.encodeproject.org/files/ENCFF000QAF/@@download/ENCFF000QAF.bigWig hg19 archived low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample, missing derived_from control insufficient read depth ENCFF000QAL fastq reads ENCSR000BMV ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOSL1-human ENCAB000AGJ DNA see document see document False 2011-07-18 ENCODE 1 1 36 single-ended 789376608 Richard Myers, HAIB 2448e426990efd4fe723bbd0c6f02a0a https://www.encodeproject.org/files/ENCFF000QAL/@@download/ENCFF000QAL.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000QEX/ released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF000QAN fastq reads ENCSR000BMV ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOSL1-human ENCAB000AGJ DNA see document see document False 2011-07-18 ENCODE 2 1 36 single-ended 883394294 Richard Myers, HAIB 77acbd427d49930a5c9e77fa6e0c16d2 https://www.encodeproject.org/files/ENCFF000QAN/@@download/ENCFF000QAN.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000QEX/ released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF001UJX bed broadPeak peaks ENCSR000BMV ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOSL1-human ENCAB000AGJ DNA see document see document False 2011-07-18 ENCODE 1 1 142787 Richard Myers, HAIB 50ce1e7b3fd0ea77c64d6b39ab4a5436 https://www.encodeproject.org/files/ENCFF001UJX/@@download/ENCFF001UJX.bed.gz hg19 archived low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample, missing derived_from control insufficient read depth ENCFF001UJY bed broadPeak peaks ENCSR000BMV ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOSL1-human ENCAB000AGJ DNA see document see document False 2011-07-18 ENCODE 2 1 108358 Richard Myers, HAIB 3cdcf7db6de37033de07a16ab10b5f3b https://www.encodeproject.org/files/ENCFF001UJY/@@download/ENCFF001UJY.bed.gz hg19 archived low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample, missing derived_from control insufficient read depth ENCFF002CLY bed narrowPeak optimal idr thresholded peaks ENCSR000BMV ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOSL1-human ENCAB000AGJ DNA see document see document False 2011-07-18 ENCODE 224220 ENCODE Consortium Analysis Working Group 542fee5cc2b0c4d57b8021a3254e21f6 https://www.encodeproject.org/files/ENCFF002CLY/@@download/ENCFF002CLY.bed.gz hg19 archived low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample, missing derived_from control insufficient read depth ENCFF478IQC bigBed narrowPeak optimal idr thresholded peaks ENCSR000BMV ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOSL1-human ENCAB000AGJ DNA see document see document False 2011-07-18 ENCODE ENCFF002CLY 482965 ENCODE Consortium b84359348997a144666fa8a2ea38ec9e https://www.encodeproject.org/files/ENCFF478IQC/@@download/ENCFF478IQC.bigBed hg19 archived low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF805FJI bam unfiltered alignments ENCSR000BMV ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOSL1-human ENCAB000AGJ DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000QAN, ENCFF643CGH 1121167385 ENCODE Processing Pipeline 8699417a2c9f8f70b3658eec61eacf8d https://www.encodeproject.org/files/ENCFF805FJI/@@download/ENCFF805FJI.bam GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF492NUF bam alignments ENCSR000BMV ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOSL1-human ENCAB000AGJ DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000QAN, ENCFF643CGH 509906295 ENCODE Processing Pipeline 7655c43c866a6fe655cb897434d78fca https://www.encodeproject.org/files/ENCFF492NUF/@@download/ENCFF492NUF.bam GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF658FMT bam unfiltered alignments ENCSR000BMV ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOSL1-human ENCAB000AGJ DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000QAL, ENCFF643CGH 997483250 ENCODE Processing Pipeline 389a119ecd82e34c7eb68a624a4ae74a https://www.encodeproject.org/files/ENCFF658FMT/@@download/ENCFF658FMT.bam GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF561ILM bam alignments ENCSR000BMV ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOSL1-human ENCAB000AGJ DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000QAL, ENCFF643CGH 425489056 ENCODE Processing Pipeline 45ef8500ed3bd5cfd374344dd5a33457 https://www.encodeproject.org/files/ENCFF561ILM/@@download/ENCFF561ILM.bam GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF788KZO bam unfiltered alignments ENCSR000BMV ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOSL1-human ENCAB000AGJ DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000QAL, ENCFF807MUK 995805098 ENCODE Processing Pipeline 3228dd9ebd28433c645623b25995f74a https://www.encodeproject.org/files/ENCFF788KZO/@@download/ENCFF788KZO.bam hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF757JWB bam unfiltered alignments ENCSR000BMV ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOSL1-human ENCAB000AGJ DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000QAN, ENCFF807MUK 1117129368 ENCODE Processing Pipeline 499e43658c65d3078c60d2389e0197ed https://www.encodeproject.org/files/ENCFF757JWB/@@download/ENCFF757JWB.bam hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF846HET bam alignments ENCSR000BMV ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOSL1-human ENCAB000AGJ DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000QAL, ENCFF807MUK 425775732 ENCODE Processing Pipeline b4f46eb04e7a9c6d84feca0d2c80b88f https://www.encodeproject.org/files/ENCFF846HET/@@download/ENCFF846HET.bam hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF670JGI bam alignments ENCSR000BMV ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOSL1-human ENCAB000AGJ DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000QAN, ENCFF807MUK 510329046 ENCODE Processing Pipeline c87cb41a41094e133dd0b0b1003606e2 https://www.encodeproject.org/files/ENCFF670JGI/@@download/ENCFF670JGI.bam hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF818UTO bigWig signal p-value ENCSR000BMV ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOSL1-human ENCAB000AGJ DNA see document see document False 2011-07-18 ENCODE 1 ENCFF561ILM, ENCFF772PJM 212540029 ENCODE Processing Pipeline 49eff6cf6e3dd3ee537ed422d5bf5071 https://www.encodeproject.org/files/ENCFF818UTO/@@download/ENCFF818UTO.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF957ZYR bigWig signal p-value ENCSR000BMV ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOSL1-human ENCAB000AGJ DNA see document see document False 2011-07-18 ENCODE 2 ENCFF492NUF, ENCFF772PJM 213449561 ENCODE Processing Pipeline c140f71d42e8e336afc21d48b84641e8 https://www.encodeproject.org/files/ENCFF957ZYR/@@download/ENCFF957ZYR.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF115YDK bigWig fold change over control ENCSR000BMV ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOSL1-human ENCAB000AGJ DNA see document see document False 2011-07-18 ENCODE 1 ENCFF561ILM, ENCFF772PJM 178031545 ENCODE Processing Pipeline 52431defaac31a23241606672efb395b https://www.encodeproject.org/files/ENCFF115YDK/@@download/ENCFF115YDK.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF922VNF bigWig signal p-value ENCSR000BMV ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOSL1-human ENCAB000AGJ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF492NUF, ENCFF561ILM, ENCFF772PJM 205486527 ENCODE Processing Pipeline 72bc11fffce7e891152d7f78dcaf24de https://www.encodeproject.org/files/ENCFF922VNF/@@download/ENCFF922VNF.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF656XBC bigWig fold change over control ENCSR000BMV ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOSL1-human ENCAB000AGJ DNA see document see document False 2011-07-18 ENCODE 2 ENCFF492NUF, ENCFF772PJM 208728098 ENCODE Processing Pipeline d71fa2db10ac6268153cfbceac43c3a2 https://www.encodeproject.org/files/ENCFF656XBC/@@download/ENCFF656XBC.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF331ETG bigWig fold change over control ENCSR000BMV ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOSL1-human ENCAB000AGJ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF492NUF, ENCFF561ILM, ENCFF772PJM 349867052 ENCODE Processing Pipeline a6ed471b6c016e713f3f15135b9b8535 https://www.encodeproject.org/files/ENCFF331ETG/@@download/ENCFF331ETG.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF207LLP bed narrowPeak peaks ENCSR000BMV ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOSL1-human ENCAB000AGJ DNA see document see document False 2011-07-18 ENCODE 2 ENCFF492NUF, ENCFF772PJM 494144 ENCODE Processing Pipeline c321c718396e5d2467e8c181b356c426 https://www.encodeproject.org/files/ENCFF207LLP/@@download/ENCFF207LLP.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF794OXE bigBed narrowPeak peaks ENCSR000BMV ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOSL1-human ENCAB000AGJ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF352JPL 10430711 ENCODE Processing Pipeline 0c68e40cf9fb3ce97249955c9a352a73 https://www.encodeproject.org/files/ENCFF794OXE/@@download/ENCFF794OXE.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF323IRR bigBed narrowPeak conservative idr thresholded peaks ENCSR000BMV ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOSL1-human ENCAB000AGJ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF503LMD 222180 ENCODE Processing Pipeline 1f62c5cc2168b8e96c8fa66d355fd750 https://www.encodeproject.org/files/ENCFF323IRR/@@download/ENCFF323IRR.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF352JPL bed narrowPeak peaks ENCSR000BMV ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOSL1-human ENCAB000AGJ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF492NUF, ENCFF561ILM, ENCFF772PJM 4491619 ENCODE Processing Pipeline 175287546de0fdd307d11f0842a13d9f https://www.encodeproject.org/files/ENCFF352JPL/@@download/ENCFF352JPL.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF087MFG bed narrowPeak optimal idr thresholded peaks ENCSR000BMV ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOSL1-human ENCAB000AGJ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF207LLP, ENCFF267ADF, ENCFF352JPL, ENCFF419RSJ 133901 ENCODE Processing Pipeline 275db6953ea2392131ba3492abb1019d https://www.encodeproject.org/files/ENCFF087MFG/@@download/ENCFF087MFG.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF140HWC bigBed narrowPeak peaks ENCSR000BMV ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOSL1-human ENCAB000AGJ DNA see document see document False 2011-07-18 ENCODE 1 ENCFF267ADF 9624527 ENCODE Processing Pipeline a85e266088b8e0a62bcc8842e48e0bdf https://www.encodeproject.org/files/ENCFF140HWC/@@download/ENCFF140HWC.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF267ADF bed narrowPeak peaks ENCSR000BMV ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOSL1-human ENCAB000AGJ DNA see document see document False 2011-07-18 ENCODE 1 ENCFF561ILM, ENCFF772PJM 3912102 ENCODE Processing Pipeline 0f6f72bcf3c57674363b47f59e42154d https://www.encodeproject.org/files/ENCFF267ADF/@@download/ENCFF267ADF.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF578CYI bigBed narrowPeak peaks ENCSR000BMV ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOSL1-human ENCAB000AGJ DNA see document see document False 2011-07-18 ENCODE 2 ENCFF207LLP 1066596 ENCODE Processing Pipeline 714ac22445f1eecd4a9766a52df85d09 https://www.encodeproject.org/files/ENCFF578CYI/@@download/ENCFF578CYI.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF503LMD bed narrowPeak conservative idr thresholded peaks ENCSR000BMV ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOSL1-human ENCAB000AGJ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF207LLP, ENCFF267ADF, ENCFF352JPL, ENCFF419RSJ 102798 ENCODE Processing Pipeline 4add319a620d323eea8eab45d5b272e0 https://www.encodeproject.org/files/ENCFF503LMD/@@download/ENCFF503LMD.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF050JOS bigBed narrowPeak optimal idr thresholded peaks ENCSR000BMV ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOSL1-human ENCAB000AGJ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF087MFG 263599 ENCODE Processing Pipeline 5b4d98642d65dd0966f71003f6142a27 https://www.encodeproject.org/files/ENCFF050JOS/@@download/ENCFF050JOS.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF536RHR bigWig signal p-value ENCSR000BMV ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOSL1-human ENCAB000AGJ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF670JGI, ENCFF750MIM, ENCFF846HET 205614447 ENCODE Processing Pipeline ebcfdbe96a720ecf221c23451f571698 https://www.encodeproject.org/files/ENCFF536RHR/@@download/ENCFF536RHR.bigWig hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF751TGF bigWig signal p-value ENCSR000BMV ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOSL1-human ENCAB000AGJ DNA see document see document False 2011-07-18 ENCODE 2 ENCFF670JGI, ENCFF750MIM 213592696 ENCODE Processing Pipeline 32f0ead7088a8436d81f1e9630c5ec4c https://www.encodeproject.org/files/ENCFF751TGF/@@download/ENCFF751TGF.bigWig hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF635IQW bigWig fold change over control ENCSR000BMV ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOSL1-human ENCAB000AGJ DNA see document see document False 2011-07-18 ENCODE 1 ENCFF750MIM, ENCFF846HET 179012196 ENCODE Processing Pipeline 39304f5aede60313edd1ebd8fe72dd1c https://www.encodeproject.org/files/ENCFF635IQW/@@download/ENCFF635IQW.bigWig hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF109ULX bigWig fold change over control ENCSR000BMV ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOSL1-human ENCAB000AGJ DNA see document see document False 2011-07-18 ENCODE 2 ENCFF670JGI, ENCFF750MIM 208397484 ENCODE Processing Pipeline b188b2b165f29cff337b740f269a9a0e https://www.encodeproject.org/files/ENCFF109ULX/@@download/ENCFF109ULX.bigWig hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF863LSA bigWig signal p-value ENCSR000BMV ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOSL1-human ENCAB000AGJ DNA see document see document False 2011-07-18 ENCODE 1 ENCFF750MIM, ENCFF846HET 212708760 ENCODE Processing Pipeline 2360bbb9e6c1b93dbbe02bf1caae518f https://www.encodeproject.org/files/ENCFF863LSA/@@download/ENCFF863LSA.bigWig hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF753OLX bed narrowPeak peaks ENCSR000BMV ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOSL1-human ENCAB000AGJ DNA see document see document False 2011-07-18 ENCODE 2 ENCFF670JGI, ENCFF750MIM 504591 ENCODE Processing Pipeline 7f0fd0a4ec1a19ce2d1dd6be0e5887e2 https://www.encodeproject.org/files/ENCFF753OLX/@@download/ENCFF753OLX.bed.gz hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF857ARL bigWig fold change over control ENCSR000BMV ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOSL1-human ENCAB000AGJ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF670JGI, ENCFF750MIM, ENCFF846HET 350802586 ENCODE Processing Pipeline 9fd1a8e85f4f282a51450ac3d7f467d0 https://www.encodeproject.org/files/ENCFF857ARL/@@download/ENCFF857ARL.bigWig hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF958LUI bigBed narrowPeak peaks ENCSR000BMV ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOSL1-human ENCAB000AGJ DNA see document see document False 2011-07-18 ENCODE 1 ENCFF400JWL 9622037 ENCODE Processing Pipeline 7604c33cb459c5f95d6f2a6bf348656f https://www.encodeproject.org/files/ENCFF958LUI/@@download/ENCFF958LUI.bigBed hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF945FHB bigBed narrowPeak peaks ENCSR000BMV ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOSL1-human ENCAB000AGJ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF818IMH 10443363 ENCODE Processing Pipeline c6cb9919e38c021d88840435600764bc https://www.encodeproject.org/files/ENCFF945FHB/@@download/ENCFF945FHB.bigBed hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF636LOB bigBed narrowPeak conservative idr thresholded peaks ENCSR000BMV ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOSL1-human ENCAB000AGJ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF961OPH 225468 ENCODE Processing Pipeline b67c634f9bf4308e2204325eeb4ffa8e https://www.encodeproject.org/files/ENCFF636LOB/@@download/ENCFF636LOB.bigBed hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF961OPH bed narrowPeak conservative idr thresholded peaks ENCSR000BMV ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOSL1-human ENCAB000AGJ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF001TDO, ENCFF400JWL, ENCFF753OLX, ENCFF818IMH 105132 ENCODE Processing Pipeline d1f05db2f652827863d240841fe7fd6b https://www.encodeproject.org/files/ENCFF961OPH/@@download/ENCFF961OPH.bed.gz hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF400JWL bed narrowPeak peaks ENCSR000BMV ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOSL1-human ENCAB000AGJ DNA see document see document False 2011-07-18 ENCODE 1 ENCFF750MIM, ENCFF846HET 3916390 ENCODE Processing Pipeline 486a998417a0cec22b14892410863eb3 https://www.encodeproject.org/files/ENCFF400JWL/@@download/ENCFF400JWL.bed.gz hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF299FAQ bigBed narrowPeak peaks ENCSR000BMV ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOSL1-human ENCAB000AGJ DNA see document see document False 2011-07-18 ENCODE 2 ENCFF753OLX 1079629 ENCODE Processing Pipeline 05028dc8f122b54acb4039688cc35abc https://www.encodeproject.org/files/ENCFF299FAQ/@@download/ENCFF299FAQ.bigBed hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF251LXJ bigBed narrowPeak optimal idr thresholded peaks ENCSR000BMV ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOSL1-human ENCAB000AGJ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF473GCH 263391 ENCODE Processing Pipeline 49af179610ad96b5b10c3e778c24062e https://www.encodeproject.org/files/ENCFF251LXJ/@@download/ENCFF251LXJ.bigBed hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF818IMH bed narrowPeak peaks ENCSR000BMV ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOSL1-human ENCAB000AGJ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF670JGI, ENCFF750MIM, ENCFF846HET 4507280 ENCODE Processing Pipeline eaf45114be5e96aab788f4150ea060e7 https://www.encodeproject.org/files/ENCFF818IMH/@@download/ENCFF818IMH.bed.gz hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF473GCH bed narrowPeak optimal idr thresholded peaks ENCSR000BMV ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOSL1-human ENCAB000AGJ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF001TDO, ENCFF400JWL, ENCFF753OLX, ENCFF818IMH 133495 ENCODE Processing Pipeline 86ddcb80bb8c5f873e909777fd5562ce https://www.encodeproject.org/files/ENCFF473GCH/@@download/ENCFF473GCH.bed.gz hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF335WPX fastq reads ENCSR557PSD ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NFE2L1-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1 1 100 paired-ended 2 ENCFF307UJX 2560479304 Michael Snyder, Stanford 588378b8d424b4bdd2686cf7b7c264ab https://www.encodeproject.org/files/ENCFF335WPX/@@download/ENCFF335WPX.fastq.gz Illumina HiSeq 2000 /files/ENCFF203GDE/, /files/ENCFF671HJP/ archived low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity poor library complexity, severe bottlenecking ENCFF663LGS fastq reads ENCSR557PSD ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NFE2L1-human ENCAB728YTO DNA False 2016-08-24 ENCODE 2 1 100 paired-ended 1 ENCFF564DJV 3025114881 Michael Snyder, Stanford b566496b6701ebf07ef489b11243b3da https://www.encodeproject.org/files/ENCFF663LGS/@@download/ENCFF663LGS.fastq.gz Illumina HiSeq 2000 /files/ENCFF203GDE/, /files/ENCFF671HJP/ archived low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity poor library complexity, severe bottlenecking ENCFF307UJX fastq reads ENCSR557PSD ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NFE2L1-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1 1 100 paired-ended 1 ENCFF335WPX 2479523999 Michael Snyder, Stanford 1d40319ab5d01f44ac6230efd02f075f https://www.encodeproject.org/files/ENCFF307UJX/@@download/ENCFF307UJX.fastq.gz Illumina HiSeq 2000 /files/ENCFF203GDE/, /files/ENCFF671HJP/ archived low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity poor library complexity, severe bottlenecking ENCFF564DJV fastq reads ENCSR557PSD ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NFE2L1-human ENCAB728YTO DNA False 2016-08-24 ENCODE 2 1 100 paired-ended 2 ENCFF663LGS 3134668729 Michael Snyder, Stanford 9fa522054cf68a05689faf700f9e056e https://www.encodeproject.org/files/ENCFF564DJV/@@download/ENCFF564DJV.fastq.gz Illumina HiSeq 2000 /files/ENCFF203GDE/, /files/ENCFF671HJP/ archived low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity poor library complexity, severe bottlenecking ENCFF290OJO bam alignments ENCSR557PSD ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NFE2L1-human ENCAB728YTO DNA False 2016-08-24 ENCODE 2 ENCFF564DJV, ENCFF663LGS, ENCFF807MUK 2838607495 ENCODE Processing Pipeline 9a66718014c6c4fa74dd6be66a3d7c84 https://www.encodeproject.org/files/ENCFF290OJO/@@download/ENCFF290OJO.bam hg19 archived low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity poor library complexity, severe bottlenecking ENCFF038IFQ bam alignments ENCSR557PSD ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NFE2L1-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1 ENCFF307UJX, ENCFF335WPX, ENCFF807MUK 2696208177 ENCODE Processing Pipeline af9783babe9495e741e72d25b2bfbe59 https://www.encodeproject.org/files/ENCFF038IFQ/@@download/ENCFF038IFQ.bam hg19 archived low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity poor library complexity, severe bottlenecking ENCFF468AZT bigWig signal p-value ENCSR557PSD ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NFE2L1-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1 ENCFF038IFQ, ENCFF316EBF 797250902 ENCODE Processing Pipeline 2c8e9e1d80896864ae64a26c266707d7 https://www.encodeproject.org/files/ENCFF468AZT/@@download/ENCFF468AZT.bigWig hg19 archived low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity poor library complexity, severe bottlenecking ENCFF056ACZ bigWig signal p-value ENCSR557PSD ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NFE2L1-human ENCAB728YTO DNA False 2016-08-24 ENCODE 2 ENCFF290OJO, ENCFF316EBF 674055366 ENCODE Processing Pipeline 4605bd9b582b14518fea236d80e7f945 https://www.encodeproject.org/files/ENCFF056ACZ/@@download/ENCFF056ACZ.bigWig hg19 archived low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity poor library complexity, severe bottlenecking ENCFF417XNV bigWig signal p-value ENCSR557PSD ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NFE2L1-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF038IFQ, ENCFF290OJO, ENCFF316EBF 982901342 ENCODE Processing Pipeline 188bc3006872138cb2a2c74d0177e6bb https://www.encodeproject.org/files/ENCFF417XNV/@@download/ENCFF417XNV.bigWig hg19 archived low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity poor library complexity, severe bottlenecking ENCFF945WMZ bigWig fold change over control ENCSR557PSD ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NFE2L1-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF038IFQ, ENCFF290OJO, ENCFF316EBF 1184777788 ENCODE Processing Pipeline 97e99f04aa8b4aa352d088adf3a80021 https://www.encodeproject.org/files/ENCFF945WMZ/@@download/ENCFF945WMZ.bigWig hg19 archived low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity poor library complexity, severe bottlenecking ENCFF065CJT bed narrowPeak peaks ENCSR557PSD ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NFE2L1-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1 ENCFF038IFQ, ENCFF316EBF 6100175 ENCODE Processing Pipeline b4ee13ebc7fd498c886ea2f21200813b https://www.encodeproject.org/files/ENCFF065CJT/@@download/ENCFF065CJT.bed.gz hg19 archived low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity poor library complexity, severe bottlenecking ENCFF392SNI bed narrowPeak optimal idr thresholded peaks ENCSR557PSD ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NFE2L1-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF001TDO, ENCFF065CJT, ENCFF192SZH, ENCFF290CCX 136325 ENCODE Processing Pipeline fdef21ba8bc96ef1ebbe23d8354c5c2e https://www.encodeproject.org/files/ENCFF392SNI/@@download/ENCFF392SNI.bed.gz hg19 archived low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity poor library complexity, severe bottlenecking ENCFF724AOP bigWig fold change over control ENCSR557PSD ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NFE2L1-human ENCAB728YTO DNA False 2016-08-24 ENCODE 2 ENCFF290OJO, ENCFF316EBF 780442034 ENCODE Processing Pipeline e4da664f94af3eeb6aa67192c002dc2a https://www.encodeproject.org/files/ENCFF724AOP/@@download/ENCFF724AOP.bigWig hg19 archived low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity poor library complexity, severe bottlenecking ENCFF192SZH bed narrowPeak peaks ENCSR557PSD ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NFE2L1-human ENCAB728YTO DNA False 2016-08-24 ENCODE 2 ENCFF290OJO, ENCFF316EBF 6150761 ENCODE Processing Pipeline 583b7b4b54bd4d096a3c63fddfed45b4 https://www.encodeproject.org/files/ENCFF192SZH/@@download/ENCFF192SZH.bed.gz hg19 archived low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity poor library complexity, severe bottlenecking ENCFF750WDF bigBed narrowPeak optimal idr thresholded peaks ENCSR557PSD ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NFE2L1-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF001TDO, ENCFF392SNI 315447 ENCODE Processing Pipeline e47bfa82d3a9e3d58596d1fc5587967b https://www.encodeproject.org/files/ENCFF750WDF/@@download/ENCFF750WDF.bigBed hg19 archived low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity poor library complexity, severe bottlenecking ENCFF716ORY bigWig fold change over control ENCSR557PSD ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NFE2L1-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1 ENCFF038IFQ, ENCFF316EBF 777202682 ENCODE Processing Pipeline b2e0885579e8af9c2ee8bf53e5c1c0bf https://www.encodeproject.org/files/ENCFF716ORY/@@download/ENCFF716ORY.bigWig hg19 archived low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity poor library complexity, severe bottlenecking ENCFF496WMH bigBed narrowPeak conservative idr thresholded peaks ENCSR557PSD ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NFE2L1-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF001TDO, ENCFF573QWP 272055 ENCODE Processing Pipeline 3316e9a7e657b67c73c4b3dceef1a40c https://www.encodeproject.org/files/ENCFF496WMH/@@download/ENCFF496WMH.bigBed hg19 archived low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity poor library complexity, severe bottlenecking ENCFF551JRQ bigBed narrowPeak peaks ENCSR557PSD ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NFE2L1-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1 ENCFF065CJT 13066556 ENCODE Processing Pipeline f6f4f40ffd93c4d3963a79f8ae0acada https://www.encodeproject.org/files/ENCFF551JRQ/@@download/ENCFF551JRQ.bigBed hg19 archived low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity poor library complexity, severe bottlenecking ENCFF693ERH bigBed narrowPeak peaks ENCSR557PSD ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NFE2L1-human ENCAB728YTO DNA False 2016-08-24 ENCODE 2 ENCFF192SZH 13149167 ENCODE Processing Pipeline 349cc1ff65e092dd3b6105307574313c https://www.encodeproject.org/files/ENCFF693ERH/@@download/ENCFF693ERH.bigBed hg19 archived low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity poor library complexity, severe bottlenecking ENCFF259YLB bigBed narrowPeak peaks ENCSR557PSD ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NFE2L1-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF290CCX 12924608 ENCODE Processing Pipeline d73c7b07eb6cd39a1b4d9f8bcc9dfc27 https://www.encodeproject.org/files/ENCFF259YLB/@@download/ENCFF259YLB.bigBed hg19 archived low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity poor library complexity, severe bottlenecking ENCFF573QWP bed narrowPeak conservative idr thresholded peaks ENCSR557PSD ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NFE2L1-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF001TDO, ENCFF065CJT, ENCFF192SZH, ENCFF290CCX 108436 ENCODE Processing Pipeline bc200fb04e318fb708268934b7c05668 https://www.encodeproject.org/files/ENCFF573QWP/@@download/ENCFF573QWP.bed.gz hg19 archived low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity poor library complexity, severe bottlenecking ENCFF290CCX bed narrowPeak peaks ENCSR557PSD ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NFE2L1-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF038IFQ, ENCFF290OJO, ENCFF316EBF 6939527 ENCODE Processing Pipeline f0036795be13a0a2a5b78bcf4abd1f9b https://www.encodeproject.org/files/ENCFF290CCX/@@download/ENCFF290CCX.bed.gz hg19 archived low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity poor library complexity, severe bottlenecking ENCFF165TMK bam unfiltered alignments ENCSR557PSD ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NFE2L1-human ENCAB728YTO DNA False 2016-08-24 ENCODE 2 100 ENCFF564DJV, ENCFF643CGH, ENCFF663LGS 5829948934 ENCODE Processing Pipeline cdc6d6fe96eca9cf087389dfaea59faa https://www.encodeproject.org/files/ENCFF165TMK/@@download/ENCFF165TMK.bam GRCh38 archived low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity poor library complexity, severe bottlenecking ENCFF274FQN bam unfiltered alignments ENCSR557PSD ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NFE2L1-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1 100 ENCFF307UJX, ENCFF335WPX, ENCFF643CGH 4932858356 ENCODE Processing Pipeline fc2586abb61a458b0d7afd80ad22ea53 https://www.encodeproject.org/files/ENCFF274FQN/@@download/ENCFF274FQN.bam GRCh38 archived low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity poor library complexity, severe bottlenecking ENCFF303EFA bam alignments ENCSR557PSD ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NFE2L1-human ENCAB728YTO DNA False 2016-08-24 ENCODE 2 100 ENCFF564DJV, ENCFF643CGH, ENCFF663LGS 2840536433 ENCODE Processing Pipeline b918e74f0a3fb934f43ff529989ba058 https://www.encodeproject.org/files/ENCFF303EFA/@@download/ENCFF303EFA.bam GRCh38 archived low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity poor library complexity, severe bottlenecking ENCFF418SJR bam alignments ENCSR557PSD ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NFE2L1-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1 100 ENCFF307UJX, ENCFF335WPX, ENCFF643CGH 2697790196 ENCODE Processing Pipeline 5913d01897eef43bfab70e04d878764b https://www.encodeproject.org/files/ENCFF418SJR/@@download/ENCFF418SJR.bam GRCh38 archived low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity poor library complexity, severe bottlenecking ENCFF819LJM bigWig signal p-value ENCSR557PSD ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NFE2L1-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1 ENCFF350IRK, ENCFF418SJR 685994347 ENCODE Processing Pipeline 2da029c82077e8cb4283cf5e5fd4dcf8 https://www.encodeproject.org/files/ENCFF819LJM/@@download/ENCFF819LJM.bigWig GRCh38 archived low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity poor library complexity, severe bottlenecking ENCFF697MTK bigWig signal p-value ENCSR557PSD ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NFE2L1-human ENCAB728YTO DNA False 2016-08-24 ENCODE 2 ENCFF303EFA, ENCFF350IRK 730292315 ENCODE Processing Pipeline fc1dfde714a62e528dde5765ad6e5982 https://www.encodeproject.org/files/ENCFF697MTK/@@download/ENCFF697MTK.bigWig GRCh38 archived low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity poor library complexity, severe bottlenecking ENCFF875HIN bigWig signal p-value ENCSR557PSD ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NFE2L1-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF303EFA, ENCFF350IRK, ENCFF418SJR 1000559100 ENCODE Processing Pipeline e3fd1ad68cab7ff8d8632f9f3fc31971 https://www.encodeproject.org/files/ENCFF875HIN/@@download/ENCFF875HIN.bigWig GRCh38 archived low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity poor library complexity, severe bottlenecking ENCFF921MPS bigWig fold change over control ENCSR557PSD ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NFE2L1-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1 ENCFF350IRK, ENCFF418SJR 778572061 ENCODE Processing Pipeline 9fa0446426a718d7f65bf7f2f0c6e8d8 https://www.encodeproject.org/files/ENCFF921MPS/@@download/ENCFF921MPS.bigWig GRCh38 archived low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity poor library complexity, severe bottlenecking ENCFF747JYV bigWig fold change over control ENCSR557PSD ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NFE2L1-human ENCAB728YTO DNA False 2016-08-24 ENCODE 2 ENCFF303EFA, ENCFF350IRK 782306336 ENCODE Processing Pipeline 0e824f7fc35c3c4a1a7e37f044840c46 https://www.encodeproject.org/files/ENCFF747JYV/@@download/ENCFF747JYV.bigWig GRCh38 archived low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity poor library complexity, severe bottlenecking ENCFF762QNF bigWig fold change over control ENCSR557PSD ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NFE2L1-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF303EFA, ENCFF350IRK, ENCFF418SJR 1209647915 ENCODE Processing Pipeline de14fb20ed88229fabcf8defb5915176 https://www.encodeproject.org/files/ENCFF762QNF/@@download/ENCFF762QNF.bigWig GRCh38 archived low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity poor library complexity, severe bottlenecking ENCFF545TVD bed narrowPeak peaks ENCSR557PSD ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NFE2L1-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1 ENCFF350IRK, ENCFF418SJR 5934728 ENCODE Processing Pipeline 1706a2abfd80b4a48d802143c4198221 https://www.encodeproject.org/files/ENCFF545TVD/@@download/ENCFF545TVD.bed.gz GRCh38 archived low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity poor library complexity, severe bottlenecking ENCFF732KRW bed narrowPeak peaks ENCSR557PSD ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NFE2L1-human ENCAB728YTO DNA False 2016-08-24 ENCODE 2 ENCFF303EFA, ENCFF350IRK 5994230 ENCODE Processing Pipeline 76ca0bf2779cee66b1486540556555cf https://www.encodeproject.org/files/ENCFF732KRW/@@download/ENCFF732KRW.bed.gz GRCh38 archived low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity poor library complexity, severe bottlenecking ENCFF293SSA bed narrowPeak peaks ENCSR557PSD ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NFE2L1-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF303EFA, ENCFF350IRK, ENCFF418SJR 6824291 ENCODE Processing Pipeline cc77c4166299fbf5adaac8d4c38b4b3a https://www.encodeproject.org/files/ENCFF293SSA/@@download/ENCFF293SSA.bed.gz GRCh38 archived low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity poor library complexity, severe bottlenecking ENCFF550OFB bigBed narrowPeak peaks ENCSR557PSD ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NFE2L1-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF293SSA 12941268 ENCODE Processing Pipeline 63370e937a10aa0fd2cab24e44dd09ec https://www.encodeproject.org/files/ENCFF550OFB/@@download/ENCFF550OFB.bigBed GRCh38 archived low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity poor library complexity, severe bottlenecking ENCFF354MJU bed narrowPeak optimal idr thresholded peaks ENCSR557PSD ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NFE2L1-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF293SSA, ENCFF419RSJ, ENCFF545TVD, ENCFF732KRW 134047 ENCODE Processing Pipeline 96d6e6e0fd80c5d099b246965715c753 https://www.encodeproject.org/files/ENCFF354MJU/@@download/ENCFF354MJU.bed.gz GRCh38 archived low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity poor library complexity, severe bottlenecking ENCFF801XOA bigBed narrowPeak peaks ENCSR557PSD ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NFE2L1-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1 ENCFF545TVD 13078674 ENCODE Processing Pipeline 41405d88e53892cbc9f979ebe73601b1 https://www.encodeproject.org/files/ENCFF801XOA/@@download/ENCFF801XOA.bigBed GRCh38 archived low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity poor library complexity, severe bottlenecking ENCFF448MHW bigBed narrowPeak peaks ENCSR557PSD ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NFE2L1-human ENCAB728YTO DNA False 2016-08-24 ENCODE 2 ENCFF732KRW 13144311 ENCODE Processing Pipeline 31173af61d09f41135566d9848eb15ad https://www.encodeproject.org/files/ENCFF448MHW/@@download/ENCFF448MHW.bigBed GRCh38 archived low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity poor library complexity, severe bottlenecking ENCFF878UZC bigBed narrowPeak conservative idr thresholded peaks ENCSR557PSD ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NFE2L1-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF967BIX 276053 ENCODE Processing Pipeline 3789e08988d3f6ae98f85ea3f3b27b9f https://www.encodeproject.org/files/ENCFF878UZC/@@download/ENCFF878UZC.bigBed GRCh38 archived low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity poor library complexity, severe bottlenecking ENCFF967BIX bed narrowPeak conservative idr thresholded peaks ENCSR557PSD ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NFE2L1-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF293SSA, ENCFF419RSJ, ENCFF545TVD, ENCFF732KRW 108311 ENCODE Processing Pipeline 4bff0327337134790e061ba8a3a803f4 https://www.encodeproject.org/files/ENCFF967BIX/@@download/ENCFF967BIX.bed.gz GRCh38 archived low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity poor library complexity, severe bottlenecking ENCFF534JQX bigBed narrowPeak optimal idr thresholded peaks ENCSR557PSD ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NFE2L1-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF354MJU 316359 ENCODE Processing Pipeline 8e41b00af64c98c6d08a37e5e0e8194d https://www.encodeproject.org/files/ENCFF534JQX/@@download/ENCFF534JQX.bigBed GRCh38 archived low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity poor library complexity, severe bottlenecking ENCFF337FVY fastq reads ENCSR850WUE ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM15-human ENCAB626AJI DNA SDS formaldehyde False 2018-01-19 ENCODE 2 1 40 single-ended 418590049 Xiang-Dong Fu, UCSD c1b7ccd41959fb5cfec0cc38c4109e3c https://www.encodeproject.org/files/ENCFF337FVY/@@download/ENCFF337FVY.fastq.gz Illumina HiSeq 2000 /files/ENCFF363JFD/ released mild to moderate bottlenecking, low read length, moderate library complexity experiment not submitted to GEO insufficient read depth ENCFF064RLS fastq reads ENCSR850WUE ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM15-human ENCAB626AJI DNA SDS formaldehyde False 2018-01-19 ENCODE 1 1 40 single-ended 398979223 Xiang-Dong Fu, UCSD 6dd87cb02f4357dc12d29031a3fbcc83 https://www.encodeproject.org/files/ENCFF064RLS/@@download/ENCFF064RLS.fastq.gz Illumina HiSeq 2000 /files/ENCFF577LLL/ released mild to moderate bottlenecking, low read length, moderate library complexity experiment not submitted to GEO insufficient read depth ENCFF709QNC bam alignments ENCSR850WUE ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM15-human ENCAB626AJI DNA SDS formaldehyde False 2018-01-19 ENCODE 2 ENCFF337FVY, ENCFF807MUK 201635267 ENCODE Processing Pipeline e7b301cc9231ada9a425c54aeee17c22 https://www.encodeproject.org/files/ENCFF709QNC/@@download/ENCFF709QNC.bam hg19 released mild to moderate bottlenecking, low read length, moderate library complexity experiment not submitted to GEO insufficient read depth ENCFF402MOS bam alignments ENCSR850WUE ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM15-human ENCAB626AJI DNA SDS formaldehyde False 2018-01-19 ENCODE 1 ENCFF064RLS, ENCFF807MUK 251308754 ENCODE Processing Pipeline 64c2114fb2da67ffd6eefdc3da76139d https://www.encodeproject.org/files/ENCFF402MOS/@@download/ENCFF402MOS.bam hg19 released mild to moderate bottlenecking, low read length, moderate library complexity experiment not submitted to GEO insufficient read depth ENCFF259RSX bam unfiltered alignments ENCSR850WUE ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM15-human ENCAB626AJI DNA SDS formaldehyde False 2018-01-19 ENCODE 1 ENCFF064RLS, ENCFF643CGH 523479473 ENCODE Processing Pipeline cec15e75269c99de567df7b190494ad5 https://www.encodeproject.org/files/ENCFF259RSX/@@download/ENCFF259RSX.bam GRCh38 released mild to moderate bottlenecking, low read length, moderate library complexity experiment not submitted to GEO insufficient read depth ENCFF254WSM bam unfiltered alignments ENCSR850WUE ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM15-human ENCAB626AJI DNA SDS formaldehyde False 2018-01-19 ENCODE 2 ENCFF337FVY, ENCFF643CGH 513569394 ENCODE Processing Pipeline 5f0a35ba79a0adcb1253959c3cbc333f https://www.encodeproject.org/files/ENCFF254WSM/@@download/ENCFF254WSM.bam GRCh38 released mild to moderate bottlenecking, low read length, moderate library complexity experiment not submitted to GEO insufficient read depth ENCFF390DNG bam alignments ENCSR850WUE ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM15-human ENCAB626AJI DNA SDS formaldehyde False 2018-01-19 ENCODE 2 ENCFF337FVY, ENCFF643CGH 201322490 ENCODE Processing Pipeline d25ba8bd5ca59e1373904ea398f9a304 https://www.encodeproject.org/files/ENCFF390DNG/@@download/ENCFF390DNG.bam GRCh38 released mild to moderate bottlenecking, low read length, moderate library complexity experiment not submitted to GEO insufficient read depth ENCFF474FMS bam alignments ENCSR850WUE ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM15-human ENCAB626AJI DNA SDS formaldehyde False 2018-01-19 ENCODE 1 ENCFF064RLS, ENCFF643CGH 250920446 ENCODE Processing Pipeline 8c5a18d2d1493e6aa1a3e0d5243c630a https://www.encodeproject.org/files/ENCFF474FMS/@@download/ENCFF474FMS.bam GRCh38 released mild to moderate bottlenecking, low read length, moderate library complexity experiment not submitted to GEO insufficient read depth ENCFF722INI bigWig signal p-value ENCSR850WUE ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM15-human ENCAB626AJI DNA SDS formaldehyde False 2018-01-19 ENCODE 2 ENCFF390DNG, ENCFF906SAI 510201860 ENCODE Processing Pipeline 1f0e9de07eba862b30162fc56a2fc8d0 https://www.encodeproject.org/files/ENCFF722INI/@@download/ENCFF722INI.bigWig GRCh38 released mild to moderate bottlenecking, low read length, moderate library complexity experiment not submitted to GEO insufficient read depth ENCFF691YUR bigWig signal p-value ENCSR850WUE ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM15-human ENCAB626AJI DNA SDS formaldehyde False 2018-01-19 ENCODE 1 ENCFF120YSP, ENCFF474FMS 522138950 ENCODE Processing Pipeline b1bdf43865137af7aff5b33a6cc6cc0d https://www.encodeproject.org/files/ENCFF691YUR/@@download/ENCFF691YUR.bigWig GRCh38 released mild to moderate bottlenecking, low read length, moderate library complexity experiment not submitted to GEO insufficient read depth ENCFF439LQK bigWig fold change over control ENCSR850WUE ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM15-human ENCAB626AJI DNA SDS formaldehyde False 2018-01-19 ENCODE 1 ENCFF120YSP, ENCFF474FMS 247276846 ENCODE Processing Pipeline 0f691feda53540dac3e19bd02ecf967c https://www.encodeproject.org/files/ENCFF439LQK/@@download/ENCFF439LQK.bigWig GRCh38 released mild to moderate bottlenecking, low read length, moderate library complexity experiment not submitted to GEO insufficient read depth ENCFF578JTO bigWig signal p-value ENCSR850WUE ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM15-human ENCAB626AJI DNA SDS formaldehyde False 2018-01-19 ENCODE 1, 2 ENCFF120YSP, ENCFF390DNG, ENCFF474FMS, ENCFF906SAI 932098968 ENCODE Processing Pipeline be1d590bf6cd6baf0a15272fcd6cb5e6 https://www.encodeproject.org/files/ENCFF578JTO/@@download/ENCFF578JTO.bigWig GRCh38 released mild to moderate bottlenecking, low read length, moderate library complexity experiment not submitted to GEO insufficient read depth ENCFF838MTF bigWig fold change over control ENCSR850WUE ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM15-human ENCAB626AJI DNA SDS formaldehyde False 2018-01-19 ENCODE 2 ENCFF390DNG, ENCFF906SAI 210358114 ENCODE Processing Pipeline 95ade94fa344bda9502f87e0e66a6960 https://www.encodeproject.org/files/ENCFF838MTF/@@download/ENCFF838MTF.bigWig GRCh38 released mild to moderate bottlenecking, low read length, moderate library complexity experiment not submitted to GEO insufficient read depth ENCFF322KBR bigWig fold change over control ENCSR850WUE ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM15-human ENCAB626AJI DNA SDS formaldehyde False 2018-01-19 ENCODE 1, 2 ENCFF120YSP, ENCFF390DNG, ENCFF474FMS, ENCFF906SAI 593374261 ENCODE Processing Pipeline 2088205bc50747d73098caa3eab88965 https://www.encodeproject.org/files/ENCFF322KBR/@@download/ENCFF322KBR.bigWig GRCh38 released mild to moderate bottlenecking, low read length, moderate library complexity experiment not submitted to GEO insufficient read depth ENCFF877VRW bed narrowPeak peaks ENCSR850WUE ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM15-human ENCAB626AJI DNA SDS formaldehyde False 2018-01-19 ENCODE 1 ENCFF120YSP, ENCFF474FMS 2919738 ENCODE Processing Pipeline 062bd4cc99c17f03cc02b199b5bace89 https://www.encodeproject.org/files/ENCFF877VRW/@@download/ENCFF877VRW.bed.gz GRCh38 released mild to moderate bottlenecking, low read length, moderate library complexity experiment not submitted to GEO insufficient read depth ENCFF278SFK bed narrowPeak peaks ENCSR850WUE ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM15-human ENCAB626AJI DNA SDS formaldehyde False 2018-01-19 ENCODE 2 ENCFF390DNG, ENCFF906SAI 2087223 ENCODE Processing Pipeline 5b274eccab96449848d74b5a20e8bda6 https://www.encodeproject.org/files/ENCFF278SFK/@@download/ENCFF278SFK.bed.gz GRCh38 released mild to moderate bottlenecking, low read length, moderate library complexity experiment not submitted to GEO insufficient read depth ENCFF061CWY bed narrowPeak peaks ENCSR850WUE ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM15-human ENCAB626AJI DNA SDS formaldehyde False 2018-01-19 ENCODE 1, 2 ENCFF120YSP, ENCFF390DNG, ENCFF474FMS, ENCFF906SAI 5730657 ENCODE Processing Pipeline 147142bb3e14a01964114e6d163283d3 https://www.encodeproject.org/files/ENCFF061CWY/@@download/ENCFF061CWY.bed.gz GRCh38 released mild to moderate bottlenecking, low read length, moderate library complexity experiment not submitted to GEO insufficient read depth ENCFF904CWX bigBed narrowPeak peaks ENCSR850WUE ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM15-human ENCAB626AJI DNA SDS formaldehyde False 2018-01-19 ENCODE 1 ENCFF877VRW 6670242 ENCODE Processing Pipeline 48cee9062fccab48c0d539b377bef7b8 https://www.encodeproject.org/files/ENCFF904CWX/@@download/ENCFF904CWX.bigBed GRCh38 released mild to moderate bottlenecking, low read length, moderate library complexity experiment not submitted to GEO insufficient read depth ENCFF517DJE bigBed narrowPeak peaks ENCSR850WUE ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM15-human ENCAB626AJI DNA SDS formaldehyde False 2018-01-19 ENCODE 2 ENCFF278SFK 5020152 ENCODE Processing Pipeline ebf5b2611644381b89927d1126125abd https://www.encodeproject.org/files/ENCFF517DJE/@@download/ENCFF517DJE.bigBed GRCh38 released mild to moderate bottlenecking, low read length, moderate library complexity experiment not submitted to GEO insufficient read depth ENCFF916EOG bigBed narrowPeak peaks ENCSR850WUE ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM15-human ENCAB626AJI DNA SDS formaldehyde False 2018-01-19 ENCODE 1, 2 ENCFF061CWY 13471398 ENCODE Processing Pipeline 9acc2181aa14c55a4f40d605984552b9 https://www.encodeproject.org/files/ENCFF916EOG/@@download/ENCFF916EOG.bigBed GRCh38 released mild to moderate bottlenecking, low read length, moderate library complexity experiment not submitted to GEO insufficient read depth ENCFF563WDZ bed narrowPeak optimal idr thresholded peaks ENCSR850WUE ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM15-human ENCAB626AJI DNA SDS formaldehyde False 2018-01-19 ENCODE 1, 2 ENCFF061CWY, ENCFF278SFK, ENCFF419RSJ, ENCFF877VRW 6248 ENCODE Processing Pipeline ba175d1279e07895a451afb39e429df4 https://www.encodeproject.org/files/ENCFF563WDZ/@@download/ENCFF563WDZ.bed.gz GRCh38 released mild to moderate bottlenecking, low read length, moderate library complexity experiment not submitted to GEO insufficient read depth ENCFF920VJQ bigBed narrowPeak optimal idr thresholded peaks ENCSR850WUE ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM15-human ENCAB626AJI DNA SDS formaldehyde False 2018-01-19 ENCODE 1, 2 ENCFF563WDZ 97664 ENCODE Processing Pipeline 8f61a7789dfd6b845ebe9fc27fe9413c https://www.encodeproject.org/files/ENCFF920VJQ/@@download/ENCFF920VJQ.bigBed GRCh38 released mild to moderate bottlenecking, low read length, moderate library complexity experiment not submitted to GEO insufficient read depth ENCFF555BUM bigWig fold change over control ENCSR850WUE ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM15-human ENCAB626AJI DNA SDS formaldehyde False 2018-01-19 ENCODE 1 ENCFF402MOS, ENCFF493QSH 247100741 ENCODE Processing Pipeline 136beb0891a70427e6bc4fa9e0e01968 https://www.encodeproject.org/files/ENCFF555BUM/@@download/ENCFF555BUM.bigWig hg19 released mild to moderate bottlenecking, low read length, moderate library complexity experiment not submitted to GEO insufficient read depth ENCFF325TSC bed narrowPeak peaks ENCSR850WUE ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM15-human ENCAB626AJI DNA SDS formaldehyde False 2018-01-19 ENCODE 2 ENCFF641CEP, ENCFF709QNC 2240256 ENCODE Processing Pipeline d9b247dda84ccbccfbe1aa818d4405da https://www.encodeproject.org/files/ENCFF325TSC/@@download/ENCFF325TSC.bed.gz hg19 released mild to moderate bottlenecking, low read length, moderate library complexity experiment not submitted to GEO insufficient read depth ENCFF541AHC bigWig signal p-value ENCSR850WUE ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM15-human ENCAB626AJI DNA SDS formaldehyde False 2018-01-19 ENCODE 1, 2 ENCFF402MOS, ENCFF493QSH, ENCFF641CEP, ENCFF709QNC 964242324 ENCODE Processing Pipeline 92ba9ecd5d9fe45284ff3e180f23e3ef https://www.encodeproject.org/files/ENCFF541AHC/@@download/ENCFF541AHC.bigWig hg19 released mild to moderate bottlenecking, low read length, moderate library complexity experiment not submitted to GEO insufficient read depth ENCFF932WVN bigBed narrowPeak peaks ENCSR850WUE ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM15-human ENCAB626AJI DNA SDS formaldehyde False 2018-01-19 ENCODE 1 ENCFF212ABS 6747905 ENCODE Processing Pipeline 178170a6f7c359f2724a6d442fc3e476 https://www.encodeproject.org/files/ENCFF932WVN/@@download/ENCFF932WVN.bigBed hg19 released mild to moderate bottlenecking, low read length, moderate library complexity experiment not submitted to GEO insufficient read depth ENCFF529NTU bigBed narrowPeak peaks ENCSR850WUE ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM15-human ENCAB626AJI DNA SDS formaldehyde False 2018-01-19 ENCODE 2 ENCFF325TSC 5224389 ENCODE Processing Pipeline d30878ea4815060418bcf7ddc0a5bbf4 https://www.encodeproject.org/files/ENCFF529NTU/@@download/ENCFF529NTU.bigBed hg19 released mild to moderate bottlenecking, low read length, moderate library complexity experiment not submitted to GEO insufficient read depth ENCFF256CSL bigWig signal p-value ENCSR850WUE ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM15-human ENCAB626AJI DNA SDS formaldehyde False 2018-01-19 ENCODE 2 ENCFF641CEP, ENCFF709QNC 585027037 ENCODE Processing Pipeline b60048453352d5d0a144ce123c22843d https://www.encodeproject.org/files/ENCFF256CSL/@@download/ENCFF256CSL.bigWig hg19 released mild to moderate bottlenecking, low read length, moderate library complexity experiment not submitted to GEO insufficient read depth ENCFF235FTV bigBed narrowPeak peaks ENCSR850WUE ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM15-human ENCAB626AJI DNA SDS formaldehyde False 2018-01-19 ENCODE 1, 2 ENCFF764ZHV 13466413 ENCODE Processing Pipeline 151197c67ada60172653cac5e9fa56f7 https://www.encodeproject.org/files/ENCFF235FTV/@@download/ENCFF235FTV.bigBed hg19 released mild to moderate bottlenecking, low read length, moderate library complexity experiment not submitted to GEO insufficient read depth ENCFF563AXY bigWig signal p-value ENCSR850WUE ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM15-human ENCAB626AJI DNA SDS formaldehyde False 2018-01-19 ENCODE 1 ENCFF402MOS, ENCFF493QSH 551557118 ENCODE Processing Pipeline 4836a2618ae1211add38d6ccddf0b336 https://www.encodeproject.org/files/ENCFF563AXY/@@download/ENCFF563AXY.bigWig hg19 released mild to moderate bottlenecking, low read length, moderate library complexity experiment not submitted to GEO insufficient read depth ENCFF534MXQ bigWig fold change over control ENCSR850WUE ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM15-human ENCAB626AJI DNA SDS formaldehyde False 2018-01-19 ENCODE 2 ENCFF641CEP, ENCFF709QNC 210111900 ENCODE Processing Pipeline e9988daba838cb930bfd2ad6823dbc7a https://www.encodeproject.org/files/ENCFF534MXQ/@@download/ENCFF534MXQ.bigWig hg19 released mild to moderate bottlenecking, low read length, moderate library complexity experiment not submitted to GEO insufficient read depth ENCFF948XVB bigWig fold change over control ENCSR850WUE ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM15-human ENCAB626AJI DNA SDS formaldehyde False 2018-01-19 ENCODE 1, 2 ENCFF402MOS, ENCFF493QSH, ENCFF641CEP, ENCFF709QNC 604513836 ENCODE Processing Pipeline 501d3606fb7d2a8eef9d1017d95320d6 https://www.encodeproject.org/files/ENCFF948XVB/@@download/ENCFF948XVB.bigWig hg19 released mild to moderate bottlenecking, low read length, moderate library complexity experiment not submitted to GEO insufficient read depth ENCFF212ABS bed narrowPeak peaks ENCSR850WUE ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM15-human ENCAB626AJI DNA SDS formaldehyde False 2018-01-19 ENCODE 1 ENCFF402MOS, ENCFF493QSH 2984149 ENCODE Processing Pipeline 274b166d82e9466f2143e4a7394ec866 https://www.encodeproject.org/files/ENCFF212ABS/@@download/ENCFF212ABS.bed.gz hg19 released mild to moderate bottlenecking, low read length, moderate library complexity experiment not submitted to GEO insufficient read depth ENCFF764ZHV bed narrowPeak peaks ENCSR850WUE ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM15-human ENCAB626AJI DNA SDS formaldehyde False 2018-01-19 ENCODE 1, 2 ENCFF402MOS, ENCFF493QSH, ENCFF641CEP, ENCFF709QNC 5850514 ENCODE Processing Pipeline cd81ce772bf7fdff2d23842c461ffed2 https://www.encodeproject.org/files/ENCFF764ZHV/@@download/ENCFF764ZHV.bed.gz hg19 released mild to moderate bottlenecking, low read length, moderate library complexity experiment not submitted to GEO insufficient read depth ENCFF761RFH bed narrowPeak conservative idr thresholded peaks ENCSR850WUE ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM15-human ENCAB626AJI DNA SDS formaldehyde False 2018-01-19 ENCODE 1, 2 ENCFF001TDO, ENCFF212ABS, ENCFF325TSC, ENCFF764ZHV 5961 ENCODE Processing Pipeline 4fc71f69eb5163f71d040396568e40c6 https://www.encodeproject.org/files/ENCFF761RFH/@@download/ENCFF761RFH.bed.gz hg19 released mild to moderate bottlenecking, low read length, moderate library complexity experiment not submitted to GEO insufficient read depth ENCFF479OSE bigBed narrowPeak conservative idr thresholded peaks ENCSR850WUE ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM15-human ENCAB626AJI DNA SDS formaldehyde False 2018-01-19 ENCODE 1, 2 ENCFF761RFH 96252 ENCODE Processing Pipeline c6c6b717311415b697d1135ebd7545d0 https://www.encodeproject.org/files/ENCFF479OSE/@@download/ENCFF479OSE.bigBed hg19 released mild to moderate bottlenecking, low read length, moderate library complexity experiment not submitted to GEO insufficient read depth ENCFF971VJZ bed narrowPeak optimal idr thresholded peaks ENCSR850WUE ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM15-human ENCAB626AJI DNA SDS formaldehyde False 2018-01-19 ENCODE 1, 2 ENCFF001TDO, ENCFF212ABS, ENCFF325TSC, ENCFF764ZHV 7462 ENCODE Processing Pipeline b168b2de611fd90e36c8a89235a80191 https://www.encodeproject.org/files/ENCFF971VJZ/@@download/ENCFF971VJZ.bed.gz hg19 released mild to moderate bottlenecking, low read length, moderate library complexity experiment not submitted to GEO insufficient read depth ENCFF863XRQ bigBed narrowPeak optimal idr thresholded peaks ENCSR850WUE ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM15-human ENCAB626AJI DNA SDS formaldehyde False 2018-01-19 ENCODE 1, 2 ENCFF971VJZ 73575 ENCODE Processing Pipeline 7157e7e4bb9f98e8ec173345d56ef672 https://www.encodeproject.org/files/ENCFF863XRQ/@@download/ENCFF863XRQ.bigBed hg19 released mild to moderate bottlenecking, low read length, moderate library complexity experiment not submitted to GEO insufficient read depth ENCFF041SSZ bam unfiltered alignments ENCSR850WUE ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM15-human ENCAB626AJI DNA SDS formaldehyde False 2018-01-19 ENCODE 2 40 ENCFF337FVY, ENCFF807MUK 511452491 ENCODE Processing Pipeline 7d145e6947095ad57ee642b882c05558 https://www.encodeproject.org/files/ENCFF041SSZ/@@download/ENCFF041SSZ.bam hg19 released mild to moderate bottlenecking, low read length, moderate library complexity experiment not submitted to GEO insufficient read depth ENCFF312KVO bam unfiltered alignments ENCSR850WUE ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM15-human ENCAB626AJI DNA SDS formaldehyde False 2018-01-19 ENCODE 1 40 ENCFF064RLS, ENCFF807MUK 521630424 ENCODE Processing Pipeline 0e1785460872d82bfe68d60965135b53 https://www.encodeproject.org/files/ENCFF312KVO/@@download/ENCFF312KVO.bam hg19 released mild to moderate bottlenecking, low read length, moderate library complexity experiment not submitted to GEO insufficient read depth ENCFF000ZBN bam alignments ENCSR000EHA ChIP-seq EFO:0002067 K562 cell line Homo sapiens TBP-human ENCAB000ALR DNA see document see document False 2011-10-29 ENCODE 1 ENCFF000ZCA 359112759 Michael Snyder, Stanford 48036b7ac21c724fe662c38f7b86fdbc https://www.encodeproject.org/files/ENCFF000ZBN/@@download/ENCFF000ZBN.bam hg19 archived low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF000ZBO bigBed narrowPeak peaks ENCSR000EHA ChIP-seq EFO:0002067 K562 cell line Homo sapiens TBP-human ENCAB000ALR DNA see document see document False 2011-10-29 ENCODE ENCFF001VPC 1835746 Michael Snyder, Stanford 9031fdc73f949dc09833c6eed947c738 https://www.encodeproject.org/files/ENCFF000ZBO/@@download/ENCFF000ZBO.bigBed hg19 archived low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF000ZBP bam alignments ENCSR000EHA ChIP-seq EFO:0002067 K562 cell line Homo sapiens TBP-human ENCAB000ALR DNA see document see document False 2011-10-29 ENCODE 2 ENCFF000ZBZ 412562443 Michael Snyder, Stanford e241a7f077112488baac8ebc100b2c1f https://www.encodeproject.org/files/ENCFF000ZBP/@@download/ENCFF000ZBP.bam hg19 archived low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF000ZBQ bigWig signal ENCSR000EHA ChIP-seq EFO:0002067 K562 cell line Homo sapiens TBP-human ENCAB000ALR DNA see document see document False 2011-10-29 ENCODE 272758144 Michael Snyder, Stanford df4594180382a8bdd6e02c35800a84bb https://www.encodeproject.org/files/ENCFF000ZBQ/@@download/ENCFF000ZBQ.bigWig hg19 archived low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample, missing derived_from ENCFF000ZBZ fastq reads ENCSR000EHA ChIP-seq EFO:0002067 K562 cell line Homo sapiens TBP-human ENCAB000ALR DNA see document see document False 2011-10-29 ENCODE 2 1 36 single-ended 889056155 Michael Snyder, Stanford 466f1fb1ab20276f22e7151f07f3617c https://www.encodeproject.org/files/ENCFF000ZBZ/@@download/ENCFF000ZBZ.fastq.gz Illumina Genome Analyzer /files/ENCFF000YQC/ released low read depth, inconsistent control read length, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF000ZCA fastq reads ENCSR000EHA ChIP-seq EFO:0002067 K562 cell line Homo sapiens TBP-human ENCAB000ALR DNA see document see document False 2011-10-29 ENCODE 1 1 36 single-ended 775864364 Michael Snyder, Stanford dd218ecba7e30f78438caa56cacf94b8 https://www.encodeproject.org/files/ENCFF000ZCA/@@download/ENCFF000ZCA.fastq.gz Illumina Genome Analyzer /files/ENCFF000YQB/ released low read depth, inconsistent control read length, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF001VPC bed narrowPeak peaks ENCSR000EHA ChIP-seq EFO:0002067 K562 cell line Homo sapiens TBP-human ENCAB000ALR DNA see document see document False 2011-10-29 ENCODE 733885 Michael Snyder, Stanford 5f961cf9a4a338ac77890f2cbbd41b1c https://www.encodeproject.org/files/ENCFF001VPC/@@download/ENCFF001VPC.bed.gz hg19 archived low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample, missing derived_from ENCFF002CYK bed narrowPeak optimal idr thresholded peaks ENCSR000EHA ChIP-seq EFO:0002067 K562 cell line Homo sapiens TBP-human ENCAB000ALR DNA see document see document False 2011-10-29 ENCODE 452402 ENCODE Consortium Analysis Working Group 679423057e1c8b5be5b7229891b84cb2 https://www.encodeproject.org/files/ENCFF002CYK/@@download/ENCFF002CYK.bed.gz hg19 archived low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample, missing derived_from ENCFF728HXI bigBed narrowPeak optimal idr thresholded peaks ENCSR000EHA ChIP-seq EFO:0002067 K562 cell line Homo sapiens TBP-human ENCAB000ALR DNA see document see document False 2011-10-29 ENCODE ENCFF002CYK 1206607 ENCODE Consortium 75f166026a31f5e209813185b7ae689f https://www.encodeproject.org/files/ENCFF728HXI/@@download/ENCFF728HXI.bigBed hg19 archived low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF652UJM bam unfiltered alignments ENCSR000EHA ChIP-seq EFO:0002067 K562 cell line Homo sapiens TBP-human ENCAB000ALR DNA see document see document False 2011-10-29 ENCODE 2 28 ENCFF000ZBZ, ENCFF643CGH 924879127 ENCODE Processing Pipeline 199331ebf2a864277560ff136292a801 https://www.encodeproject.org/files/ENCFF652UJM/@@download/ENCFF652UJM.bam GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF572IXE bam alignments ENCSR000EHA ChIP-seq EFO:0002067 K562 cell line Homo sapiens TBP-human ENCAB000ALR DNA see document see document False 2011-10-29 ENCODE 2 28 ENCFF000ZBZ, ENCFF643CGH 518681417 ENCODE Processing Pipeline c7cd790a1525c6cc10a02d80040266c2 https://www.encodeproject.org/files/ENCFF572IXE/@@download/ENCFF572IXE.bam GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF835GHC bam alignments ENCSR000EHA ChIP-seq EFO:0002067 K562 cell line Homo sapiens TBP-human ENCAB000ALR DNA see document see document False 2011-10-29 ENCODE 1 28 ENCFF000ZCA, ENCFF643CGH 434427599 ENCODE Processing Pipeline b7ad9c7e1d56011e159bbeac87966eaf https://www.encodeproject.org/files/ENCFF835GHC/@@download/ENCFF835GHC.bam GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF631NGI bam unfiltered alignments ENCSR000EHA ChIP-seq EFO:0002067 K562 cell line Homo sapiens TBP-human ENCAB000ALR DNA see document see document False 2011-10-29 ENCODE 1 28 ENCFF000ZCA, ENCFF643CGH 803961715 ENCODE Processing Pipeline ddbf1cfb58addc5ad69216a87622ba70 https://www.encodeproject.org/files/ENCFF631NGI/@@download/ENCFF631NGI.bam GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF735DTE bam unfiltered alignments ENCSR000EHA ChIP-seq EFO:0002067 K562 cell line Homo sapiens TBP-human ENCAB000ALR DNA see document see document False 2011-10-29 ENCODE 2 28 ENCFF000ZBZ, ENCFF807MUK 921805597 ENCODE Processing Pipeline 71ed93a19cf784f07a99a3975eee0268 https://www.encodeproject.org/files/ENCFF735DTE/@@download/ENCFF735DTE.bam hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF621BLD bam unfiltered alignments ENCSR000EHA ChIP-seq EFO:0002067 K562 cell line Homo sapiens TBP-human ENCAB000ALR DNA see document see document False 2011-10-29 ENCODE 1 28 ENCFF000ZCA, ENCFF807MUK 801037314 ENCODE Processing Pipeline 98ee6197fcf039c95ebef9d256f0164c https://www.encodeproject.org/files/ENCFF621BLD/@@download/ENCFF621BLD.bam hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF177SSB bam alignments ENCSR000EHA ChIP-seq EFO:0002067 K562 cell line Homo sapiens TBP-human ENCAB000ALR DNA see document see document False 2011-10-29 ENCODE 2 28 ENCFF000ZBZ, ENCFF807MUK 519348281 ENCODE Processing Pipeline 91d11798ecc89f58f33fd397755d0cba https://www.encodeproject.org/files/ENCFF177SSB/@@download/ENCFF177SSB.bam hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF495MQP bam alignments ENCSR000EHA ChIP-seq EFO:0002067 K562 cell line Homo sapiens TBP-human ENCAB000ALR DNA see document see document False 2011-10-29 ENCODE 1 28 ENCFF000ZCA, ENCFF807MUK 434984367 ENCODE Processing Pipeline 414cfbb6291c2f84f68f24224a817baf https://www.encodeproject.org/files/ENCFF495MQP/@@download/ENCFF495MQP.bam hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF459AAR bigWig signal p-value ENCSR000EHA ChIP-seq EFO:0002067 K562 cell line Homo sapiens TBP-human ENCAB000ALR DNA see document see document False 2011-10-29 ENCODE 1 ENCFF495MQP, ENCFF498SAC, ENCFF732TLR 375714329 ENCODE Processing Pipeline b00fa33a3a7627cb5a4cc016f80f91b0 https://www.encodeproject.org/files/ENCFF459AAR/@@download/ENCFF459AAR.bigWig hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF173KQH bigWig signal p-value ENCSR000EHA ChIP-seq EFO:0002067 K562 cell line Homo sapiens TBP-human ENCAB000ALR DNA see document see document False 2011-10-29 ENCODE 1 ENCFF156NSV, ENCFF715JBE, ENCFF835GHC 369571687 ENCODE Processing Pipeline 7a874f1b24776f644b6481e7f56eb7ee https://www.encodeproject.org/files/ENCFF173KQH/@@download/ENCFF173KQH.bigWig GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF519SCV bigWig fold change over control ENCSR000EHA ChIP-seq EFO:0002067 K562 cell line Homo sapiens TBP-human ENCAB000ALR DNA see document see document False 2011-10-29 ENCODE 1 ENCFF156NSV, ENCFF715JBE, ENCFF835GHC 271712146 ENCODE Processing Pipeline fed0925afe0820ec1549195d7db863f5 https://www.encodeproject.org/files/ENCFF519SCV/@@download/ENCFF519SCV.bigWig GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF778YKO bigWig fold change over control ENCSR000EHA ChIP-seq EFO:0002067 K562 cell line Homo sapiens TBP-human ENCAB000ALR DNA see document see document False 2011-10-29 ENCODE 1 ENCFF495MQP, ENCFF498SAC, ENCFF732TLR 270739150 ENCODE Processing Pipeline 7de044e083ed57c5be1fd7dafe8a3002 https://www.encodeproject.org/files/ENCFF778YKO/@@download/ENCFF778YKO.bigWig hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF836RGM bigWig signal p-value ENCSR000EHA ChIP-seq EFO:0002067 K562 cell line Homo sapiens TBP-human ENCAB000ALR DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF177SSB, ENCFF495MQP, ENCFF498SAC, ENCFF732TLR 550329224 ENCODE Processing Pipeline 222a344217a149f4bf7d3729cf0ebae4 https://www.encodeproject.org/files/ENCFF836RGM/@@download/ENCFF836RGM.bigWig hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF877AND bed narrowPeak peaks ENCSR000EHA ChIP-seq EFO:0002067 K562 cell line Homo sapiens TBP-human ENCAB000ALR DNA see document see document False 2011-10-29 ENCODE 1 ENCFF156NSV, ENCFF715JBE, ENCFF835GHC 5196204 ENCODE Processing Pipeline 793f6076c9fd160d59c2722bcdcd67f6 https://www.encodeproject.org/files/ENCFF877AND/@@download/ENCFF877AND.bed.gz GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF523ODF bed narrowPeak peaks ENCSR000EHA ChIP-seq EFO:0002067 K562 cell line Homo sapiens TBP-human ENCAB000ALR DNA see document see document False 2011-10-29 ENCODE 2 ENCFF177SSB, ENCFF498SAC 4519827 ENCODE Processing Pipeline 2e3e2f6ed744da703d91e8e1370c9b74 https://www.encodeproject.org/files/ENCFF523ODF/@@download/ENCFF523ODF.bed.gz hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF984HBV bigWig signal p-value ENCSR000EHA ChIP-seq EFO:0002067 K562 cell line Homo sapiens TBP-human ENCAB000ALR DNA see document see document False 2011-10-29 ENCODE 2 ENCFF177SSB, ENCFF498SAC 283560873 ENCODE Processing Pipeline c065c0e54161a305bb83f39f100a9b78 https://www.encodeproject.org/files/ENCFF984HBV/@@download/ENCFF984HBV.bigWig hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF535PDX bigWig signal p-value ENCSR000EHA ChIP-seq EFO:0002067 K562 cell line Homo sapiens TBP-human ENCAB000ALR DNA see document see document False 2011-10-29 ENCODE 2 ENCFF156NSV, ENCFF572IXE 281856218 ENCODE Processing Pipeline 51183862bd44646402ddd3a74dbff92c https://www.encodeproject.org/files/ENCFF535PDX/@@download/ENCFF535PDX.bigWig GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF088UNT bigWig fold change over control ENCSR000EHA ChIP-seq EFO:0002067 K562 cell line Homo sapiens TBP-human ENCAB000ALR DNA see document see document False 2011-10-29 ENCODE 2 ENCFF177SSB, ENCFF498SAC 263738439 ENCODE Processing Pipeline bdc1798d4f2176d593e0c21d8c838eaa https://www.encodeproject.org/files/ENCFF088UNT/@@download/ENCFF088UNT.bigWig hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF727KHF bigWig fold change over control ENCSR000EHA ChIP-seq EFO:0002067 K562 cell line Homo sapiens TBP-human ENCAB000ALR DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF156NSV, ENCFF572IXE, ENCFF715JBE, ENCFF835GHC 506902738 ENCODE Processing Pipeline a731b94f8b6f3976aa623e15aab78aa4 https://www.encodeproject.org/files/ENCFF727KHF/@@download/ENCFF727KHF.bigWig GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF545FAT bed narrowPeak peaks ENCSR000EHA ChIP-seq EFO:0002067 K562 cell line Homo sapiens TBP-human ENCAB000ALR DNA see document see document False 2011-10-29 ENCODE 1 ENCFF495MQP, ENCFF498SAC, ENCFF732TLR 5201909 ENCODE Processing Pipeline f778df33398231bdd16946eadc00a734 https://www.encodeproject.org/files/ENCFF545FAT/@@download/ENCFF545FAT.bed.gz hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF279YVD bigWig fold change over control ENCSR000EHA ChIP-seq EFO:0002067 K562 cell line Homo sapiens TBP-human ENCAB000ALR DNA see document see document False 2011-10-29 ENCODE 2 ENCFF156NSV, ENCFF572IXE 260363576 ENCODE Processing Pipeline ed855651d3a3b4d1d451fb23bc00e90d https://www.encodeproject.org/files/ENCFF279YVD/@@download/ENCFF279YVD.bigWig GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF752GLM bigWig fold change over control ENCSR000EHA ChIP-seq EFO:0002067 K562 cell line Homo sapiens TBP-human ENCAB000ALR DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF177SSB, ENCFF495MQP, ENCFF498SAC, ENCFF732TLR 529487133 ENCODE Processing Pipeline 6fa3124b34327c16af05c6d42b638e5a https://www.encodeproject.org/files/ENCFF752GLM/@@download/ENCFF752GLM.bigWig hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF098FKU bigWig signal p-value ENCSR000EHA ChIP-seq EFO:0002067 K562 cell line Homo sapiens TBP-human ENCAB000ALR DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF156NSV, ENCFF572IXE, ENCFF715JBE, ENCFF835GHC 514287983 ENCODE Processing Pipeline 119a69166ad6e5a9bfd6790572f8f071 https://www.encodeproject.org/files/ENCFF098FKU/@@download/ENCFF098FKU.bigWig GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF307DMW bed narrowPeak peaks ENCSR000EHA ChIP-seq EFO:0002067 K562 cell line Homo sapiens TBP-human ENCAB000ALR DNA see document see document False 2011-10-29 ENCODE 2 ENCFF156NSV, ENCFF572IXE 4515875 ENCODE Processing Pipeline 136a35353d2928ecf9c602794ede31c5 https://www.encodeproject.org/files/ENCFF307DMW/@@download/ENCFF307DMW.bed.gz GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF891AHH bed narrowPeak peaks ENCSR000EHA ChIP-seq EFO:0002067 K562 cell line Homo sapiens TBP-human ENCAB000ALR DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF177SSB, ENCFF495MQP, ENCFF498SAC, ENCFF732TLR 5554902 ENCODE Processing Pipeline e995fb323a6b9e2470b30af5fb926b01 https://www.encodeproject.org/files/ENCFF891AHH/@@download/ENCFF891AHH.bed.gz hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF234DFK bed narrowPeak peaks ENCSR000EHA ChIP-seq EFO:0002067 K562 cell line Homo sapiens TBP-human ENCAB000ALR DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF156NSV, ENCFF572IXE, ENCFF715JBE, ENCFF835GHC 5549806 ENCODE Processing Pipeline 2341371e3719ed8f646fc51538f5f404 https://www.encodeproject.org/files/ENCFF234DFK/@@download/ENCFF234DFK.bed.gz GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF159SBO bed narrowPeak conservative idr thresholded peaks ENCSR000EHA ChIP-seq EFO:0002067 K562 cell line Homo sapiens TBP-human ENCAB000ALR DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF001TDO, ENCFF523ODF, ENCFF545FAT, ENCFF891AHH 366307 ENCODE Processing Pipeline 9a173a049cd6d2dfd2e3bf96f94a5c19 https://www.encodeproject.org/files/ENCFF159SBO/@@download/ENCFF159SBO.bed.gz hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF182IDO bigBed narrowPeak conservative idr thresholded peaks ENCSR000EHA ChIP-seq EFO:0002067 K562 cell line Homo sapiens TBP-human ENCAB000ALR DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF609UTS 796692 ENCODE Processing Pipeline 67428b4226745845441b3f04eb68ac71 https://www.encodeproject.org/files/ENCFF182IDO/@@download/ENCFF182IDO.bigBed GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF022TYK bigBed narrowPeak peaks ENCSR000EHA ChIP-seq EFO:0002067 K562 cell line Homo sapiens TBP-human ENCAB000ALR DNA see document see document False 2011-10-29 ENCODE 2 ENCFF523ODF 10467313 ENCODE Processing Pipeline 3de3a89e4f761b21e69f016dfd8dfd2b https://www.encodeproject.org/files/ENCFF022TYK/@@download/ENCFF022TYK.bigBed hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF942JYP bigBed narrowPeak conservative idr thresholded peaks ENCSR000EHA ChIP-seq EFO:0002067 K562 cell line Homo sapiens TBP-human ENCAB000ALR DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF159SBO 795465 ENCODE Processing Pipeline 7d951770d69fdcf2fdd7b8fa6362c15f https://www.encodeproject.org/files/ENCFF942JYP/@@download/ENCFF942JYP.bigBed hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF173KLF bigBed narrowPeak optimal idr thresholded peaks ENCSR000EHA ChIP-seq EFO:0002067 K562 cell line Homo sapiens TBP-human ENCAB000ALR DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF380FJL 841616 ENCODE Processing Pipeline 4bc8f34aff6aa7349eb8d1770c5befc7 https://www.encodeproject.org/files/ENCFF173KLF/@@download/ENCFF173KLF.bigBed hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF246WEV bigBed narrowPeak peaks ENCSR000EHA ChIP-seq EFO:0002067 K562 cell line Homo sapiens TBP-human ENCAB000ALR DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF234DFK 13309344 ENCODE Processing Pipeline 24c61161b5e94cd84ae100da5b9eeadf https://www.encodeproject.org/files/ENCFF246WEV/@@download/ENCFF246WEV.bigBed GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF380FJL bed narrowPeak optimal idr thresholded peaks ENCSR000EHA ChIP-seq EFO:0002067 K562 cell line Homo sapiens TBP-human ENCAB000ALR DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF001TDO, ENCFF523ODF, ENCFF545FAT, ENCFF891AHH 395661 ENCODE Processing Pipeline 119c19af83bd82e64f13fb0805f4b209 https://www.encodeproject.org/files/ENCFF380FJL/@@download/ENCFF380FJL.bed.gz hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF370YGS bed narrowPeak optimal idr thresholded peaks ENCSR000EHA ChIP-seq EFO:0002067 K562 cell line Homo sapiens TBP-human ENCAB000ALR DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF234DFK, ENCFF307DMW, ENCFF419RSJ, ENCFF877AND 404676 ENCODE Processing Pipeline b1e02cad87c932f2787e21483038a402 https://www.encodeproject.org/files/ENCFF370YGS/@@download/ENCFF370YGS.bed.gz GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF228WNY bigBed narrowPeak peaks ENCSR000EHA ChIP-seq EFO:0002067 K562 cell line Homo sapiens TBP-human ENCAB000ALR DNA see document see document False 2011-10-29 ENCODE 1 ENCFF877AND 13027569 ENCODE Processing Pipeline a6f0d113f3b53476937a90ded24dc2a8 https://www.encodeproject.org/files/ENCFF228WNY/@@download/ENCFF228WNY.bigBed GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF901UYM bigBed narrowPeak optimal idr thresholded peaks ENCSR000EHA ChIP-seq EFO:0002067 K562 cell line Homo sapiens TBP-human ENCAB000ALR DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF370YGS 854371 ENCODE Processing Pipeline be60c35b1826c62e18a64727d84b05b0 https://www.encodeproject.org/files/ENCFF901UYM/@@download/ENCFF901UYM.bigBed GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF021WSF bigBed narrowPeak peaks ENCSR000EHA ChIP-seq EFO:0002067 K562 cell line Homo sapiens TBP-human ENCAB000ALR DNA see document see document False 2011-10-29 ENCODE 1 ENCFF545FAT 13026694 ENCODE Processing Pipeline 692f7c8fe6fe4efef0695fb419e0f97e https://www.encodeproject.org/files/ENCFF021WSF/@@download/ENCFF021WSF.bigBed hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF952CIN bigBed narrowPeak peaks ENCSR000EHA ChIP-seq EFO:0002067 K562 cell line Homo sapiens TBP-human ENCAB000ALR DNA see document see document False 2011-10-29 ENCODE 2 ENCFF307DMW 10471643 ENCODE Processing Pipeline dc94d17af6a9457533a0ed9334a01e60 https://www.encodeproject.org/files/ENCFF952CIN/@@download/ENCFF952CIN.bigBed GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF400WZT bigBed narrowPeak peaks ENCSR000EHA ChIP-seq EFO:0002067 K562 cell line Homo sapiens TBP-human ENCAB000ALR DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF891AHH 13305552 ENCODE Processing Pipeline 091828b9bc6f28fa710e05e441b4e814 https://www.encodeproject.org/files/ENCFF400WZT/@@download/ENCFF400WZT.bigBed hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF609UTS bed narrowPeak conservative idr thresholded peaks ENCSR000EHA ChIP-seq EFO:0002067 K562 cell line Homo sapiens TBP-human ENCAB000ALR DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF234DFK, ENCFF307DMW, ENCFF419RSJ, ENCFF877AND 367133 ENCODE Processing Pipeline 230af57a401ebf7ac39e4045e6005dd2 https://www.encodeproject.org/files/ENCFF609UTS/@@download/ENCFF609UTS.bed.gz GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF281EIK fastq reads ENCSR077DKV ChIP-seq EFO:0002067 K562 cell line Homo sapiens CREM-human ENCAB000AAT DNA see document see document False 2014-07-07 ENCODE 1 1 50 single-ended 1830816994 Richard Myers, HAIB a0bba3596cb1f01c19a60f39b810ecff SRA:SRR5331221 https://www.encodeproject.org/files/ENCFF281EIK/@@download/ENCFF281EIK.fastq.gz Illumina HiSeq 2000 /files/ENCFF001RVO/ released low read depth, antibody characterized with exemption ENCFF183QKB fastq reads ENCSR077DKV ChIP-seq EFO:0002067 K562 cell line Homo sapiens CREM-human ENCAB000AAT DNA see document see document False 2014-07-07 ENCODE 2 1 50 single-ended 1266098192 Richard Myers, HAIB 328fef045a5fb348b2404f71b276443f SRA:SRR5331220 https://www.encodeproject.org/files/ENCFF183QKB/@@download/ENCFF183QKB.fastq.gz Illumina HiSeq 2000 /files/ENCFF002BGC/ released low read depth, antibody characterized with exemption ENCFF146TUI bam unfiltered alignments ENCSR077DKV ChIP-seq EFO:0002067 K562 cell line Homo sapiens CREM-human ENCAB000AAT DNA see document see document False 2014-07-07 ENCODE 1 50 ENCFF281EIK, ENCFF807MUK 1901604022 ENCODE Processing Pipeline abced924799343ff1164a7bad5c0b64a https://www.encodeproject.org/files/ENCFF146TUI/@@download/ENCFF146TUI.bam hg19 released low read depth, antibody characterized with exemption ENCFF147ZCC bam unfiltered alignments ENCSR077DKV ChIP-seq EFO:0002067 K562 cell line Homo sapiens CREM-human ENCAB000AAT DNA see document see document False 2014-07-07 ENCODE 2 50 ENCFF183QKB, ENCFF807MUK 1329356935 ENCODE Processing Pipeline 29ec9c62f41f16085fc56bfd7ac039a2 https://www.encodeproject.org/files/ENCFF147ZCC/@@download/ENCFF147ZCC.bam hg19 released low read depth, antibody characterized with exemption ENCFF578BYK bam unfiltered alignments ENCSR077DKV ChIP-seq EFO:0002067 K562 cell line Homo sapiens CREM-human ENCAB000AAT DNA see document see document False 2014-07-07 ENCODE 1 50 ENCFF281EIK, ENCFF643CGH 1904971605 ENCODE Processing Pipeline e45c1df92ad7e1f3d903ded9de7f0e4f https://www.encodeproject.org/files/ENCFF578BYK/@@download/ENCFF578BYK.bam GRCh38 released low read depth, antibody characterized with exemption ENCFF358BPA bam unfiltered alignments ENCSR077DKV ChIP-seq EFO:0002067 K562 cell line Homo sapiens CREM-human ENCAB000AAT DNA see document see document False 2014-07-07 ENCODE 2 50 ENCFF183QKB, ENCFF643CGH 1331506326 ENCODE Processing Pipeline c7c11a07ff46a605bfcc42f62e99f6eb https://www.encodeproject.org/files/ENCFF358BPA/@@download/ENCFF358BPA.bam GRCh38 released low read depth, antibody characterized with exemption ENCFF115VTJ bam alignments ENCSR077DKV ChIP-seq EFO:0002067 K562 cell line Homo sapiens CREM-human ENCAB000AAT DNA see document see document False 2014-07-07 ENCODE 2 50 ENCFF183QKB, ENCFF807MUK 970730340 ENCODE Processing Pipeline f1128a5d9508a94affb8eee8d33bc7ac https://www.encodeproject.org/files/ENCFF115VTJ/@@download/ENCFF115VTJ.bam hg19 released low read depth, antibody characterized with exemption ENCFF363YKW bam alignments ENCSR077DKV ChIP-seq EFO:0002067 K562 cell line Homo sapiens CREM-human ENCAB000AAT DNA see document see document False 2014-07-07 ENCODE 2 50 ENCFF183QKB, ENCFF643CGH 970248899 ENCODE Processing Pipeline c14853318a55d2b3eb71326faad9076f https://www.encodeproject.org/files/ENCFF363YKW/@@download/ENCFF363YKW.bam GRCh38 released low read depth, antibody characterized with exemption ENCFF131HAH bam alignments ENCSR077DKV ChIP-seq EFO:0002067 K562 cell line Homo sapiens CREM-human ENCAB000AAT DNA see document see document False 2014-07-07 ENCODE 1 50 ENCFF281EIK, ENCFF807MUK 1376328635 ENCODE Processing Pipeline 7be3e1f3ec3d7673c1b8a5a150cf21d8 https://www.encodeproject.org/files/ENCFF131HAH/@@download/ENCFF131HAH.bam hg19 released low read depth, antibody characterized with exemption ENCFF473NMO bam alignments ENCSR077DKV ChIP-seq EFO:0002067 K562 cell line Homo sapiens CREM-human ENCAB000AAT DNA see document see document False 2014-07-07 ENCODE 1 50 ENCFF281EIK, ENCFF643CGH 1375839326 ENCODE Processing Pipeline 89582cb16309704f069e342171333ee9 https://www.encodeproject.org/files/ENCFF473NMO/@@download/ENCFF473NMO.bam GRCh38 released low read depth, antibody characterized with exemption ENCFF247NLO bigWig signal p-value ENCSR077DKV ChIP-seq EFO:0002067 K562 cell line Homo sapiens CREM-human ENCAB000AAT DNA see document see document False 2014-07-07 ENCODE 1 ENCFF332SVJ, ENCFF473NMO, ENCFF709XAA 984751689 ENCODE Processing Pipeline b57b18489ba985edee6ef679521455b5 https://www.encodeproject.org/files/ENCFF247NLO/@@download/ENCFF247NLO.bigWig GRCh38 released low read depth, antibody characterized with exemption ENCFF265CJN bigWig signal p-value ENCSR077DKV ChIP-seq EFO:0002067 K562 cell line Homo sapiens CREM-human ENCAB000AAT DNA see document see document False 2014-07-07 ENCODE 2 ENCFF332SVJ, ENCFF363YKW, ENCFF709XAA 979793261 ENCODE Processing Pipeline 912ec8e1614fa74f99689337f3c0f588 https://www.encodeproject.org/files/ENCFF265CJN/@@download/ENCFF265CJN.bigWig GRCh38 released low read depth, antibody characterized with exemption ENCFF626OOO bigWig signal p-value ENCSR077DKV ChIP-seq EFO:0002067 K562 cell line Homo sapiens CREM-human ENCAB000AAT DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF332SVJ, ENCFF363YKW, ENCFF473NMO, ENCFF709XAA 1345516850 ENCODE Processing Pipeline 791388dbb07f0836d8a3e7f50793c9d0 https://www.encodeproject.org/files/ENCFF626OOO/@@download/ENCFF626OOO.bigWig GRCh38 released low read depth, antibody characterized with exemption ENCFF650VEE bigWig fold change over control ENCSR077DKV ChIP-seq EFO:0002067 K562 cell line Homo sapiens CREM-human ENCAB000AAT DNA see document see document False 2014-07-07 ENCODE 1 ENCFF332SVJ, ENCFF473NMO, ENCFF709XAA 802579304 ENCODE Processing Pipeline 208c2b63f23741794eb60314298f9af5 https://www.encodeproject.org/files/ENCFF650VEE/@@download/ENCFF650VEE.bigWig GRCh38 released low read depth, antibody characterized with exemption ENCFF623AMR bigWig fold change over control ENCSR077DKV ChIP-seq EFO:0002067 K562 cell line Homo sapiens CREM-human ENCAB000AAT DNA see document see document False 2014-07-07 ENCODE 2 ENCFF332SVJ, ENCFF363YKW, ENCFF709XAA 642703123 ENCODE Processing Pipeline 507c672fc34ce8b99f040c6c8fbe0498 https://www.encodeproject.org/files/ENCFF623AMR/@@download/ENCFF623AMR.bigWig GRCh38 released low read depth, antibody characterized with exemption ENCFF900REU bigWig fold change over control ENCSR077DKV ChIP-seq EFO:0002067 K562 cell line Homo sapiens CREM-human ENCAB000AAT DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF332SVJ, ENCFF363YKW, ENCFF473NMO, ENCFF709XAA 1098954451 ENCODE Processing Pipeline 93e5728248a3954d5df862e40c26ab93 https://www.encodeproject.org/files/ENCFF900REU/@@download/ENCFF900REU.bigWig GRCh38 released low read depth, antibody characterized with exemption ENCFF294TKX bed narrowPeak peaks ENCSR077DKV ChIP-seq EFO:0002067 K562 cell line Homo sapiens CREM-human ENCAB000AAT DNA see document see document False 2014-07-07 ENCODE 1 ENCFF332SVJ, ENCFF473NMO, ENCFF709XAA 6352302 ENCODE Processing Pipeline 851854e5e9bb7bc05487becd854a6b2c https://www.encodeproject.org/files/ENCFF294TKX/@@download/ENCFF294TKX.bed.gz GRCh38 released low read depth, antibody characterized with exemption ENCFF602FXU bed narrowPeak peaks ENCSR077DKV ChIP-seq EFO:0002067 K562 cell line Homo sapiens CREM-human ENCAB000AAT DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF332SVJ, ENCFF363YKW, ENCFF473NMO, ENCFF709XAA 6784191 ENCODE Processing Pipeline d65fbbf671a3926934d8d08cf7107f5a https://www.encodeproject.org/files/ENCFF602FXU/@@download/ENCFF602FXU.bed.gz GRCh38 released low read depth, antibody characterized with exemption ENCFF770PCN bigBed narrowPeak peaks ENCSR077DKV ChIP-seq EFO:0002067 K562 cell line Homo sapiens CREM-human ENCAB000AAT DNA see document see document False 2014-07-07 ENCODE 2 ENCFF675MHT 13207837 ENCODE Processing Pipeline 598e1de8f198050fdad052bd0bf5877a https://www.encodeproject.org/files/ENCFF770PCN/@@download/ENCFF770PCN.bigBed GRCh38 released low read depth, antibody characterized with exemption ENCFF675MHT bed narrowPeak peaks ENCSR077DKV ChIP-seq EFO:0002067 K562 cell line Homo sapiens CREM-human ENCAB000AAT DNA see document see document False 2014-07-07 ENCODE 2 ENCFF332SVJ, ENCFF363YKW, ENCFF709XAA 5863045 ENCODE Processing Pipeline 3f4ef3f530fc925a034c676165edf98c https://www.encodeproject.org/files/ENCFF675MHT/@@download/ENCFF675MHT.bed.gz GRCh38 released low read depth, antibody characterized with exemption ENCFF159OAX bed narrowPeak conservative idr thresholded peaks ENCSR077DKV ChIP-seq EFO:0002067 K562 cell line Homo sapiens CREM-human ENCAB000AAT DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF294TKX, ENCFF419RSJ, ENCFF602FXU, ENCFF675MHT 634458 ENCODE Processing Pipeline 5704bd78e270ce39640de3e4936a4be4 https://www.encodeproject.org/files/ENCFF159OAX/@@download/ENCFF159OAX.bed.gz GRCh38 released low read depth, antibody characterized with exemption ENCFF669JCI bigBed narrowPeak peaks ENCSR077DKV ChIP-seq EFO:0002067 K562 cell line Homo sapiens CREM-human ENCAB000AAT DNA see document see document False 2014-07-07 ENCODE 1 ENCFF294TKX 13536862 ENCODE Processing Pipeline 78db40a2f3561436c7d2ca0777501578 https://www.encodeproject.org/files/ENCFF669JCI/@@download/ENCFF669JCI.bigBed GRCh38 released low read depth, antibody characterized with exemption ENCFF574NOK bigBed narrowPeak peaks ENCSR077DKV ChIP-seq EFO:0002067 K562 cell line Homo sapiens CREM-human ENCAB000AAT DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF602FXU 13511408 ENCODE Processing Pipeline 16ea735698646eb2c5ae6a3741c1d712 https://www.encodeproject.org/files/ENCFF574NOK/@@download/ENCFF574NOK.bigBed GRCh38 released low read depth, antibody characterized with exemption ENCFF015DBZ bigBed narrowPeak conservative idr thresholded peaks ENCSR077DKV ChIP-seq EFO:0002067 K562 cell line Homo sapiens CREM-human ENCAB000AAT DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF159OAX 1312121 ENCODE Processing Pipeline 3420e411478ca38436165f2a926e7e2c https://www.encodeproject.org/files/ENCFF015DBZ/@@download/ENCFF015DBZ.bigBed GRCh38 released low read depth, antibody characterized with exemption ENCFF021XJN bed narrowPeak optimal idr thresholded peaks ENCSR077DKV ChIP-seq EFO:0002067 K562 cell line Homo sapiens CREM-human ENCAB000AAT DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF294TKX, ENCFF419RSJ, ENCFF602FXU, ENCFF675MHT 663445 ENCODE Processing Pipeline 2cc7dab80c84f9a442997a58288842c1 https://www.encodeproject.org/files/ENCFF021XJN/@@download/ENCFF021XJN.bed.gz GRCh38 released low read depth, antibody characterized with exemption ENCFF866FMO bigBed narrowPeak optimal idr thresholded peaks ENCSR077DKV ChIP-seq EFO:0002067 K562 cell line Homo sapiens CREM-human ENCAB000AAT DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF021XJN 1357233 ENCODE Processing Pipeline 91736d7452b7010e1af551b6d80687da https://www.encodeproject.org/files/ENCFF866FMO/@@download/ENCFF866FMO.bigBed GRCh38 released low read depth, antibody characterized with exemption ENCFF186BPW bigWig signal p-value ENCSR077DKV ChIP-seq EFO:0002067 K562 cell line Homo sapiens CREM-human ENCAB000AAT DNA see document see document False 2014-07-07 ENCODE 1 ENCFF023YMB, ENCFF061QOJ, ENCFF131HAH 1221320833 ENCODE Processing Pipeline f7bb505ae02936ce77c0be886a563f4f https://www.encodeproject.org/files/ENCFF186BPW/@@download/ENCFF186BPW.bigWig hg19 released low read depth, antibody characterized with exemption ENCFF938RHP bigWig signal p-value ENCSR077DKV ChIP-seq EFO:0002067 K562 cell line Homo sapiens CREM-human ENCAB000AAT DNA see document see document False 2014-07-07 ENCODE 2 ENCFF023YMB, ENCFF061QOJ, ENCFF115VTJ 980576099 ENCODE Processing Pipeline 3b1375d518a0062082fc527b5e2410e1 https://www.encodeproject.org/files/ENCFF938RHP/@@download/ENCFF938RHP.bigWig hg19 released low read depth, antibody characterized with exemption ENCFF208SUL bigWig fold change over control ENCSR077DKV ChIP-seq EFO:0002067 K562 cell line Homo sapiens CREM-human ENCAB000AAT DNA see document see document False 2014-07-07 ENCODE 2 ENCFF023YMB, ENCFF061QOJ, ENCFF115VTJ 643260670 ENCODE Processing Pipeline ed0764fa50e4c698fb59aec94bb55545 https://www.encodeproject.org/files/ENCFF208SUL/@@download/ENCFF208SUL.bigWig hg19 released low read depth, antibody characterized with exemption ENCFF968CBF bigWig signal p-value ENCSR077DKV ChIP-seq EFO:0002067 K562 cell line Homo sapiens CREM-human ENCAB000AAT DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF023YMB, ENCFF061QOJ, ENCFF115VTJ, ENCFF131HAH 1304623932 ENCODE Processing Pipeline e8f085e2f09212a4eaa8746a026f1790 https://www.encodeproject.org/files/ENCFF968CBF/@@download/ENCFF968CBF.bigWig hg19 released low read depth, antibody characterized with exemption ENCFF944LXO bigWig fold change over control ENCSR077DKV ChIP-seq EFO:0002067 K562 cell line Homo sapiens CREM-human ENCAB000AAT DNA see document see document False 2014-07-07 ENCODE 1 ENCFF023YMB, ENCFF061QOJ, ENCFF131HAH 817915990 ENCODE Processing Pipeline 60e00b18e3e0b855a52643559ba716ba https://www.encodeproject.org/files/ENCFF944LXO/@@download/ENCFF944LXO.bigWig hg19 released low read depth, antibody characterized with exemption ENCFF026KYB bigWig fold change over control ENCSR077DKV ChIP-seq EFO:0002067 K562 cell line Homo sapiens CREM-human ENCAB000AAT DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF023YMB, ENCFF061QOJ, ENCFF115VTJ, ENCFF131HAH 1103679483 ENCODE Processing Pipeline 895764d5734f33a240e61f45c625c358 https://www.encodeproject.org/files/ENCFF026KYB/@@download/ENCFF026KYB.bigWig hg19 released low read depth, antibody characterized with exemption ENCFF045SMN bed narrowPeak peaks ENCSR077DKV ChIP-seq EFO:0002067 K562 cell line Homo sapiens CREM-human ENCAB000AAT DNA see document see document False 2014-07-07 ENCODE 1 ENCFF023YMB, ENCFF061QOJ, ENCFF131HAH 6212068 ENCODE Processing Pipeline 4d303f0bcffe18274deecf13520dfd59 https://www.encodeproject.org/files/ENCFF045SMN/@@download/ENCFF045SMN.bed.gz hg19 released low read depth, antibody characterized with exemption ENCFF535IGN bigBed narrowPeak peaks ENCSR077DKV ChIP-seq EFO:0002067 K562 cell line Homo sapiens CREM-human ENCAB000AAT DNA see document see document False 2014-07-07 ENCODE 1 ENCFF045SMN 13362640 ENCODE Processing Pipeline 7f9da50d68843e0a736cb6c6dd7c8ab8 https://www.encodeproject.org/files/ENCFF535IGN/@@download/ENCFF535IGN.bigBed hg19 released low read depth, antibody characterized with exemption ENCFF917CTE bigBed narrowPeak peaks ENCSR077DKV ChIP-seq EFO:0002067 K562 cell line Homo sapiens CREM-human ENCAB000AAT DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF477IXW 13379195 ENCODE Processing Pipeline 436f5f45c4aff8b9959d0fb5da748bce https://www.encodeproject.org/files/ENCFF917CTE/@@download/ENCFF917CTE.bigBed hg19 released low read depth, antibody characterized with exemption ENCFF357OAA bed narrowPeak peaks ENCSR077DKV ChIP-seq EFO:0002067 K562 cell line Homo sapiens CREM-human ENCAB000AAT DNA see document see document False 2014-07-07 ENCODE 2 ENCFF023YMB, ENCFF061QOJ, ENCFF115VTJ 5760292 ENCODE Processing Pipeline 57cd23fbb6807ef1926017cdddb8efac https://www.encodeproject.org/files/ENCFF357OAA/@@download/ENCFF357OAA.bed.gz hg19 released low read depth, antibody characterized with exemption ENCFF477IXW bed narrowPeak peaks ENCSR077DKV ChIP-seq EFO:0002067 K562 cell line Homo sapiens CREM-human ENCAB000AAT DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF023YMB, ENCFF061QOJ, ENCFF115VTJ, ENCFF131HAH 6680945 ENCODE Processing Pipeline f5b14472ec98f963c35d668b3636b252 https://www.encodeproject.org/files/ENCFF477IXW/@@download/ENCFF477IXW.bed.gz hg19 released low read depth, antibody characterized with exemption ENCFF744NXL bed narrowPeak conservative idr thresholded peaks ENCSR077DKV ChIP-seq EFO:0002067 K562 cell line Homo sapiens CREM-human ENCAB000AAT DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF001TDO, ENCFF045SMN, ENCFF357OAA, ENCFF477IXW 604775 ENCODE Processing Pipeline ca800c0284be134f57aaacdd0316c355 https://www.encodeproject.org/files/ENCFF744NXL/@@download/ENCFF744NXL.bed.gz hg19 released low read depth, antibody characterized with exemption ENCFF948TXN bed narrowPeak optimal idr thresholded peaks ENCSR077DKV ChIP-seq EFO:0002067 K562 cell line Homo sapiens CREM-human ENCAB000AAT DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF001TDO, ENCFF045SMN, ENCFF357OAA, ENCFF477IXW 627991 ENCODE Processing Pipeline faf8f9d6ef509ef17dd410cd21d30238 https://www.encodeproject.org/files/ENCFF948TXN/@@download/ENCFF948TXN.bed.gz hg19 released low read depth, antibody characterized with exemption ENCFF081BXU bigBed narrowPeak optimal idr thresholded peaks ENCSR077DKV ChIP-seq EFO:0002067 K562 cell line Homo sapiens CREM-human ENCAB000AAT DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF948TXN 1030546 ENCODE Processing Pipeline fb4d029fc0dc065266e578a0104d8b5a https://www.encodeproject.org/files/ENCFF081BXU/@@download/ENCFF081BXU.bigBed hg19 released low read depth, antibody characterized with exemption ENCFF155WMI bigBed narrowPeak peaks ENCSR077DKV ChIP-seq EFO:0002067 K562 cell line Homo sapiens CREM-human ENCAB000AAT DNA see document see document False 2014-07-07 ENCODE 2 ENCFF357OAA 10911974 ENCODE Processing Pipeline 25eba44272ae8d14274a0cb5981a34c2 https://www.encodeproject.org/files/ENCFF155WMI/@@download/ENCFF155WMI.bigBed hg19 released low read depth, antibody characterized with exemption ENCFF490TSP bigBed narrowPeak conservative idr thresholded peaks ENCSR077DKV ChIP-seq EFO:0002067 K562 cell line Homo sapiens CREM-human ENCAB000AAT DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF744NXL 999634 ENCODE Processing Pipeline 4e7b83661300dc056c91cf7f37f35640 https://www.encodeproject.org/files/ENCFF490TSP/@@download/ENCFF490TSP.bigBed hg19 released low read depth, antibody characterized with exemption ENCFF872XMB bam unfiltered alignments ENCSR643VTW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCA4-human ENCAB425IPH DNA False 2016-10-31 ENCODE 2 100 ENCFF218VUS, ENCFF807MUK, ENCFF890WRL 4293842442 ENCODE Processing Pipeline 1ea2e865c750618e4011c5da192480c3 https://www.encodeproject.org/files/ENCFF872XMB/@@download/ENCFF872XMB.bam hg19 released borderline replicate concordance, antibody characterized with exemption missing control alignments ENCFF856LDZ bam unfiltered alignments ENCSR643VTW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCA4-human ENCAB425IPH DNA False 2016-10-31 ENCODE 1 100 ENCFF281JRR, ENCFF538IMN, ENCFF807MUK 5915933763 ENCODE Processing Pipeline c06d362f5b7f2829786185f56aa10ae0 https://www.encodeproject.org/files/ENCFF856LDZ/@@download/ENCFF856LDZ.bam hg19 released borderline replicate concordance, antibody characterized with exemption missing control alignments ENCFF890WRL fastq reads ENCSR643VTW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCA4-human ENCAB425IPH DNA False 2016-10-31 ENCODE 2 1 100 paired-ended 2 ENCFF218VUS 1995332199 Michael Snyder, Stanford e5f8947176ca40d8c65f85a76d56a987 SRA:SRR5111948 https://www.encodeproject.org/files/ENCFF890WRL/@@download/ENCFF890WRL.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFA/ released borderline replicate concordance, antibody characterized with exemption missing control alignments ENCFF538IMN fastq reads ENCSR643VTW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCA4-human ENCAB425IPH DNA False 2016-10-31 ENCODE 1 1 100 paired-ended 2 ENCFF281JRR 2704279396 Michael Snyder, Stanford e7700fe265793ed95b79ee44b8659716 SRA:SRR5111947 https://www.encodeproject.org/files/ENCFF538IMN/@@download/ENCFF538IMN.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFH/ released borderline replicate concordance, antibody characterized with exemption missing control alignments ENCFF218VUS fastq reads ENCSR643VTW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCA4-human ENCAB425IPH DNA False 2016-10-31 ENCODE 2 1 100 paired-ended 1 ENCFF890WRL 1926887620 Michael Snyder, Stanford fae57b1ceacce88dcbebb74bef752e22 SRA:SRR5111948 https://www.encodeproject.org/files/ENCFF218VUS/@@download/ENCFF218VUS.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFD/ released borderline replicate concordance, antibody characterized with exemption missing control alignments ENCFF281JRR fastq reads ENCSR643VTW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCA4-human ENCAB425IPH DNA False 2016-10-31 ENCODE 1 1 100 paired-ended 1 ENCFF538IMN 2813327530 Michael Snyder, Stanford 0f26e5a404cd249c5ea17b08ec2a95dd SRA:SRR5111947 https://www.encodeproject.org/files/ENCFF281JRR/@@download/ENCFF281JRR.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFF/ released borderline replicate concordance, antibody characterized with exemption missing control alignments ENCFF473GDU bam alignments ENCSR643VTW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCA4-human ENCAB425IPH DNA False 2016-10-31 ENCODE 2 100 ENCFF218VUS, ENCFF807MUK, ENCFF890WRL 3577773016 ENCODE Processing Pipeline 726306d79db0b32ea8d444adb0353649 https://www.encodeproject.org/files/ENCFF473GDU/@@download/ENCFF473GDU.bam hg19 released borderline replicate concordance, antibody characterized with exemption missing control alignments ENCFF607LWB bam alignments ENCSR643VTW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCA4-human ENCAB425IPH DNA False 2016-10-31 ENCODE 1 100 ENCFF281JRR, ENCFF538IMN, ENCFF807MUK 5107935295 ENCODE Processing Pipeline 02355c46d4860dabe03f2f9275da922c https://www.encodeproject.org/files/ENCFF607LWB/@@download/ENCFF607LWB.bam hg19 released borderline replicate concordance, antibody characterized with exemption missing control alignments ENCFF776RWU bigWig signal p-value ENCSR643VTW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCA4-human ENCAB425IPH DNA False 2016-10-31 ENCODE 1 ENCFF581ZJL, ENCFF607LWB 1340393333 ENCODE Processing Pipeline eac79381a2aabba5e279d0cd073aeffb https://www.encodeproject.org/files/ENCFF776RWU/@@download/ENCFF776RWU.bigWig hg19 released borderline replicate concordance, antibody characterized with exemption missing control alignments ENCFF326IDF bigWig signal p-value ENCSR643VTW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCA4-human ENCAB425IPH DNA False 2016-10-31 ENCODE 2 ENCFF051LWI, ENCFF473GDU 1079583632 ENCODE Processing Pipeline a524c2aee4d14655c749981deaa1e6bd https://www.encodeproject.org/files/ENCFF326IDF/@@download/ENCFF326IDF.bigWig hg19 released borderline replicate concordance, antibody characterized with exemption missing control alignments ENCFF087PSY bigWig signal p-value ENCSR643VTW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCA4-human ENCAB425IPH DNA False 2016-10-31 ENCODE 1, 2 ENCFF051LWI, ENCFF473GDU, ENCFF581ZJL, ENCFF607LWB 1910249838 ENCODE Processing Pipeline 6a54dea6443d06f0715e0246cf954792 https://www.encodeproject.org/files/ENCFF087PSY/@@download/ENCFF087PSY.bigWig hg19 released borderline replicate concordance, antibody characterized with exemption missing control alignments ENCFF030BWV bigWig fold change over control ENCSR643VTW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCA4-human ENCAB425IPH DNA False 2016-10-31 ENCODE 1 ENCFF581ZJL, ENCFF607LWB 1305053000 ENCODE Processing Pipeline d84c4e25f3490638a5edc209fc4ea896 https://www.encodeproject.org/files/ENCFF030BWV/@@download/ENCFF030BWV.bigWig hg19 released borderline replicate concordance, antibody characterized with exemption missing control alignments ENCFF096HOG bigWig fold change over control ENCSR643VTW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCA4-human ENCAB425IPH DNA False 2016-10-31 ENCODE 2 ENCFF051LWI, ENCFF473GDU 1032580570 ENCODE Processing Pipeline aa550c9255fc56973772e691c1eef747 https://www.encodeproject.org/files/ENCFF096HOG/@@download/ENCFF096HOG.bigWig hg19 released borderline replicate concordance, antibody characterized with exemption missing control alignments ENCFF131WXL bigWig fold change over control ENCSR643VTW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCA4-human ENCAB425IPH DNA False 2016-10-31 ENCODE 1, 2 ENCFF051LWI, ENCFF473GDU, ENCFF581ZJL, ENCFF607LWB 2131985367 ENCODE Processing Pipeline b4c74b02c32649f8955d89db8e48fa12 https://www.encodeproject.org/files/ENCFF131WXL/@@download/ENCFF131WXL.bigWig hg19 released borderline replicate concordance, antibody characterized with exemption missing control alignments ENCFF839WLX bed narrowPeak peaks ENCSR643VTW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCA4-human ENCAB425IPH DNA False 2016-10-31 ENCODE 1 ENCFF581ZJL, ENCFF607LWB 7182624 ENCODE Processing Pipeline 7cdf0e768ab4a89b9f8bb35087b49d87 https://www.encodeproject.org/files/ENCFF839WLX/@@download/ENCFF839WLX.bed.gz hg19 released borderline replicate concordance, antibody characterized with exemption missing control alignments ENCFF622WDZ bed narrowPeak peaks ENCSR643VTW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCA4-human ENCAB425IPH DNA False 2016-10-31 ENCODE 2 ENCFF051LWI, ENCFF473GDU 7079040 ENCODE Processing Pipeline 817b2387e09c000d8bee229f9933df2a https://www.encodeproject.org/files/ENCFF622WDZ/@@download/ENCFF622WDZ.bed.gz hg19 released borderline replicate concordance, antibody characterized with exemption missing control alignments ENCFF701XIM bed narrowPeak peaks ENCSR643VTW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCA4-human ENCAB425IPH DNA False 2016-10-31 ENCODE 1, 2 ENCFF051LWI, ENCFF473GDU, ENCFF581ZJL, ENCFF607LWB 7237550 ENCODE Processing Pipeline fba6edeb7e7d91994bddf1b275cf4b58 https://www.encodeproject.org/files/ENCFF701XIM/@@download/ENCFF701XIM.bed.gz hg19 released borderline replicate concordance, antibody characterized with exemption missing control alignments ENCFF477IDQ bigBed narrowPeak peaks ENCSR643VTW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCA4-human ENCAB425IPH DNA False 2016-10-31 ENCODE 1 ENCFF839WLX 12841307 ENCODE Processing Pipeline 3e5d813f0ace7b65fb9b2779901f3e31 https://www.encodeproject.org/files/ENCFF477IDQ/@@download/ENCFF477IDQ.bigBed hg19 released borderline replicate concordance, antibody characterized with exemption missing control alignments ENCFF445PAZ bigBed narrowPeak peaks ENCSR643VTW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCA4-human ENCAB425IPH DNA False 2016-10-31 ENCODE 2 ENCFF622WDZ 13031733 ENCODE Processing Pipeline 120d6bcab397b6561240db6bc5190166 https://www.encodeproject.org/files/ENCFF445PAZ/@@download/ENCFF445PAZ.bigBed hg19 released borderline replicate concordance, antibody characterized with exemption missing control alignments ENCFF315CKV bigBed narrowPeak peaks ENCSR643VTW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCA4-human ENCAB425IPH DNA False 2016-10-31 ENCODE 1, 2 ENCFF701XIM 12781543 ENCODE Processing Pipeline 777d015a566f25aa526722046e655ac9 https://www.encodeproject.org/files/ENCFF315CKV/@@download/ENCFF315CKV.bigBed hg19 released borderline replicate concordance, antibody characterized with exemption missing control alignments ENCFF066UWW bigBed narrowPeak conservative idr thresholded peaks ENCSR643VTW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCA4-human ENCAB425IPH DNA False 2016-10-31 ENCODE 1, 2 ENCFF171AYO 278084 ENCODE Processing Pipeline 5fb38ded5e5c8c5c7c71ace2041e90a7 https://www.encodeproject.org/files/ENCFF066UWW/@@download/ENCFF066UWW.bigBed hg19 released borderline replicate concordance, antibody characterized with exemption missing control alignments ENCFF171AYO bed narrowPeak conservative idr thresholded peaks ENCSR643VTW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCA4-human ENCAB425IPH DNA False 2016-10-31 ENCODE 1, 2 ENCFF001TDO, ENCFF622WDZ, ENCFF701XIM, ENCFF839WLX 113454 ENCODE Processing Pipeline fb45c2e070852523b4f8759e606b924f https://www.encodeproject.org/files/ENCFF171AYO/@@download/ENCFF171AYO.bed.gz hg19 released borderline replicate concordance, antibody characterized with exemption missing control alignments ENCFF013MAI bigBed narrowPeak optimal idr thresholded peaks ENCSR643VTW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCA4-human ENCAB425IPH DNA False 2016-10-31 ENCODE 1, 2 ENCFF197YHU 1095409 ENCODE Processing Pipeline 6cb9e53abd66010ff2a0f54cc5cd4541 https://www.encodeproject.org/files/ENCFF013MAI/@@download/ENCFF013MAI.bigBed hg19 released borderline replicate concordance, antibody characterized with exemption missing control alignments ENCFF197YHU bed narrowPeak optimal idr thresholded peaks ENCSR643VTW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCA4-human ENCAB425IPH DNA False 2016-10-31 ENCODE 1, 2 ENCFF001TDO, ENCFF622WDZ, ENCFF701XIM, ENCFF839WLX 578376 ENCODE Processing Pipeline 23f1dd4b6ba4d0826d8a51cdd0b8657d https://www.encodeproject.org/files/ENCFF197YHU/@@download/ENCFF197YHU.bed.gz hg19 released borderline replicate concordance, antibody characterized with exemption missing control alignments ENCFF773FLB bam unfiltered alignments ENCSR643VTW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCA4-human ENCAB425IPH DNA False 2016-10-31 ENCODE 2 100 ENCFF218VUS, ENCFF643CGH, ENCFF890WRL 4298391128 ENCODE Processing Pipeline b3a8b0fdddbd1fb983d8ea0c039c8c6d https://www.encodeproject.org/files/ENCFF773FLB/@@download/ENCFF773FLB.bam GRCh38 released borderline replicate concordance, antibody characterized with exemption missing control alignments ENCFF228IMW bam unfiltered alignments ENCSR643VTW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCA4-human ENCAB425IPH DNA False 2016-10-31 ENCODE 1 100 ENCFF281JRR, ENCFF538IMN, ENCFF643CGH 5920571050 ENCODE Processing Pipeline 1afe30fb5650fead12ac50df86b11b5d https://www.encodeproject.org/files/ENCFF228IMW/@@download/ENCFF228IMW.bam GRCh38 released borderline replicate concordance, antibody characterized with exemption missing control alignments ENCFF157HYJ bam alignments ENCSR643VTW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCA4-human ENCAB425IPH DNA False 2016-10-31 ENCODE 2 100 ENCFF218VUS, ENCFF643CGH, ENCFF890WRL 3580303278 ENCODE Processing Pipeline c3bca805fbd05456c81a6019348e28f5 https://www.encodeproject.org/files/ENCFF157HYJ/@@download/ENCFF157HYJ.bam GRCh38 released borderline replicate concordance, antibody characterized with exemption missing control alignments ENCFF606LUD bam alignments ENCSR643VTW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCA4-human ENCAB425IPH DNA False 2016-10-31 ENCODE 1 100 ENCFF281JRR, ENCFF538IMN, ENCFF643CGH 5109623043 ENCODE Processing Pipeline ccba4e172c8211289268fdd1acdb0b5a https://www.encodeproject.org/files/ENCFF606LUD/@@download/ENCFF606LUD.bam GRCh38 released borderline replicate concordance, antibody characterized with exemption missing control alignments ENCFF042NAK bigWig signal p-value ENCSR643VTW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCA4-human ENCAB425IPH DNA False 2016-10-31 ENCODE 1 ENCFF606LUD 1236477244 ENCODE Processing Pipeline 72deddaba69e085538ab075c6aa3e7b0 https://www.encodeproject.org/files/ENCFF042NAK/@@download/ENCFF042NAK.bigWig GRCh38 released borderline replicate concordance, antibody characterized with exemption missing control alignments ENCFF620IES bigWig signal p-value ENCSR643VTW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCA4-human ENCAB425IPH DNA False 2016-10-31 ENCODE 2 ENCFF157HYJ 999572180 ENCODE Processing Pipeline 6ccb5c61f1b1886e88cf8905e793d743 https://www.encodeproject.org/files/ENCFF620IES/@@download/ENCFF620IES.bigWig GRCh38 released borderline replicate concordance, antibody characterized with exemption missing control alignments ENCFF532LRF bigWig signal p-value ENCSR643VTW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCA4-human ENCAB425IPH DNA False 2016-10-31 ENCODE 1, 2 ENCFF157HYJ, ENCFF606LUD 1815351441 ENCODE Processing Pipeline 031791f5c2010889407a963f580f2255 https://www.encodeproject.org/files/ENCFF532LRF/@@download/ENCFF532LRF.bigWig GRCh38 released borderline replicate concordance, antibody characterized with exemption missing control alignments ENCFF359JOO bigWig fold change over control ENCSR643VTW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCA4-human ENCAB425IPH DNA False 2016-10-31 ENCODE 1 ENCFF606LUD 1308747652 ENCODE Processing Pipeline 7c032eb0d84ffe97f7719582d6770c49 https://www.encodeproject.org/files/ENCFF359JOO/@@download/ENCFF359JOO.bigWig GRCh38 released borderline replicate concordance, antibody characterized with exemption missing control alignments ENCFF778MRS bigWig fold change over control ENCSR643VTW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCA4-human ENCAB425IPH DNA False 2016-10-31 ENCODE 2 ENCFF157HYJ 1034000680 ENCODE Processing Pipeline b48dacb563d0e459e83c292129bf65ab https://www.encodeproject.org/files/ENCFF778MRS/@@download/ENCFF778MRS.bigWig GRCh38 released borderline replicate concordance, antibody characterized with exemption missing control alignments ENCFF745GLK bigWig fold change over control ENCSR643VTW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCA4-human ENCAB425IPH DNA False 2016-10-31 ENCODE 1, 2 ENCFF157HYJ, ENCFF606LUD 2088094113 ENCODE Processing Pipeline 0dd75d028a0a7560c58a5261f0fdc989 https://www.encodeproject.org/files/ENCFF745GLK/@@download/ENCFF745GLK.bigWig GRCh38 released borderline replicate concordance, antibody characterized with exemption missing control alignments ENCFF222FIP bed narrowPeak peaks ENCSR643VTW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCA4-human ENCAB425IPH DNA False 2016-10-31 ENCODE 1 ENCFF606LUD 7141425 ENCODE Processing Pipeline da265fd2a97bacb94e50ce735073ae87 https://www.encodeproject.org/files/ENCFF222FIP/@@download/ENCFF222FIP.bed.gz GRCh38 released borderline replicate concordance, antibody characterized with exemption missing control alignments ENCFF572UYY bed narrowPeak peaks ENCSR643VTW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCA4-human ENCAB425IPH DNA False 2016-10-31 ENCODE 2 ENCFF157HYJ 6950714 ENCODE Processing Pipeline 0d87bbf3d5056b5b4b865ac94e18bb79 https://www.encodeproject.org/files/ENCFF572UYY/@@download/ENCFF572UYY.bed.gz GRCh38 released borderline replicate concordance, antibody characterized with exemption missing control alignments ENCFF968DGA bed narrowPeak peaks ENCSR643VTW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCA4-human ENCAB425IPH DNA False 2016-10-31 ENCODE 1, 2 ENCFF157HYJ, ENCFF606LUD 7242349 ENCODE Processing Pipeline e89d7e0e4007cbd4dc79307de27d8ffd https://www.encodeproject.org/files/ENCFF968DGA/@@download/ENCFF968DGA.bed.gz GRCh38 released borderline replicate concordance, antibody characterized with exemption missing control alignments ENCFF152MDX bigBed narrowPeak peaks ENCSR643VTW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCA4-human ENCAB425IPH DNA False 2016-10-31 ENCODE 1 ENCFF222FIP 12837542 ENCODE Processing Pipeline 0aaaf2b66e20e79a2a68965a7ec649f2 https://www.encodeproject.org/files/ENCFF152MDX/@@download/ENCFF152MDX.bigBed GRCh38 released borderline replicate concordance, antibody characterized with exemption missing control alignments ENCFF572RYZ bigBed narrowPeak peaks ENCSR643VTW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCA4-human ENCAB425IPH DNA False 2016-10-31 ENCODE 2 ENCFF572UYY 12964889 ENCODE Processing Pipeline 2cc93bc5dd3ae31d43301308b3c66cdb https://www.encodeproject.org/files/ENCFF572RYZ/@@download/ENCFF572RYZ.bigBed GRCh38 released borderline replicate concordance, antibody characterized with exemption missing control alignments ENCFF075XUY bigBed narrowPeak peaks ENCSR643VTW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCA4-human ENCAB425IPH DNA False 2016-10-31 ENCODE 1, 2 ENCFF968DGA 12791433 ENCODE Processing Pipeline e979fdc06f3ff604a7444e8918971e52 https://www.encodeproject.org/files/ENCFF075XUY/@@download/ENCFF075XUY.bigBed GRCh38 released borderline replicate concordance, antibody characterized with exemption missing control alignments ENCFF300RMI bed narrowPeak conservative idr thresholded peaks ENCSR643VTW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCA4-human ENCAB425IPH DNA False 2016-10-31 ENCODE 1, 2 ENCFF222FIP, ENCFF419RSJ, ENCFF572UYY, ENCFF968DGA 110231 ENCODE Processing Pipeline 137c77d7e8efb2d6eda11897d6002c90 https://www.encodeproject.org/files/ENCFF300RMI/@@download/ENCFF300RMI.bed.gz GRCh38 released borderline replicate concordance, antibody characterized with exemption missing control alignments ENCFF386KCW bigBed narrowPeak conservative idr thresholded peaks ENCSR643VTW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCA4-human ENCAB425IPH DNA False 2016-10-31 ENCODE 1, 2 ENCFF300RMI 273944 ENCODE Processing Pipeline 385cddd98d1e2b4c16b8a59d3d04e2a0 https://www.encodeproject.org/files/ENCFF386KCW/@@download/ENCFF386KCW.bigBed GRCh38 released borderline replicate concordance, antibody characterized with exemption missing control alignments ENCFF361RWX bed narrowPeak optimal idr thresholded peaks ENCSR643VTW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCA4-human ENCAB425IPH DNA False 2016-10-31 ENCODE 1, 2 ENCFF222FIP, ENCFF419RSJ, ENCFF572UYY, ENCFF968DGA 465677 ENCODE Processing Pipeline b1f87d1b831be06b49195b578bc64bbc https://www.encodeproject.org/files/ENCFF361RWX/@@download/ENCFF361RWX.bed.gz GRCh38 released borderline replicate concordance, antibody characterized with exemption missing control alignments ENCFF517ZLV bigBed narrowPeak optimal idr thresholded peaks ENCSR643VTW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCA4-human ENCAB425IPH DNA False 2016-10-31 ENCODE 1, 2 ENCFF361RWX 937027 ENCODE Processing Pipeline 7beb2e0b205e1ad215f6854be4c53f93 https://www.encodeproject.org/files/ENCFF517ZLV/@@download/ENCFF517ZLV.bigBed GRCh38 released borderline replicate concordance, antibody characterized with exemption missing control alignments ENCFF727LAN bam unfiltered alignments ENCSR085DDI ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFXL1-human ENCAB208FGX DNA False 2016-12-05 ENCODE 1 100 ENCFF358LFL, ENCFF575GFV, ENCFF807MUK 5687572355 ENCODE Processing Pipeline d0741c826afac6b439b53ed47fe92ac1 https://www.encodeproject.org/files/ENCFF727LAN/@@download/ENCFF727LAN.bam hg19 released ENCFF270BER bam unfiltered alignments ENCSR085DDI ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFXL1-human ENCAB208FGX DNA False 2016-12-05 ENCODE 2 100 ENCFF197EBM, ENCFF277SWU, ENCFF807MUK 4571640428 ENCODE Processing Pipeline 0123c976072eb505e70a8285f94eb142 https://www.encodeproject.org/files/ENCFF270BER/@@download/ENCFF270BER.bam hg19 released ENCFF575GFV fastq reads ENCSR085DDI ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFXL1-human ENCAB208FGX DNA False 2016-12-05 ENCODE 1 1 100 paired-ended 2 ENCFF358LFL 2592206982 Michael Snyder, Stanford 06b1c04eff54a616cd5900e29a43875c SRA:SRR5111100 https://www.encodeproject.org/files/ENCFF575GFV/@@download/ENCFF575GFV.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFH/ released ENCFF277SWU fastq reads ENCSR085DDI ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFXL1-human ENCAB208FGX DNA False 2016-12-05 ENCODE 2 1 100 paired-ended 1 ENCFF197EBM 2035922789 Michael Snyder, Stanford a724ca1dfa744ffd4100f4bcddf22283 SRA:SRR5111099 https://www.encodeproject.org/files/ENCFF277SWU/@@download/ENCFF277SWU.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFD/ released ENCFF358LFL fastq reads ENCSR085DDI ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFXL1-human ENCAB208FGX DNA False 2016-12-05 ENCODE 1 1 100 paired-ended 1 ENCFF575GFV 2559517993 Michael Snyder, Stanford 7b2d76489b47d55831eb2c7d01810fe5 SRA:SRR5111100 https://www.encodeproject.org/files/ENCFF358LFL/@@download/ENCFF358LFL.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFF/ released ENCFF197EBM fastq reads ENCSR085DDI ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFXL1-human ENCAB208FGX DNA False 2016-12-05 ENCODE 2 1 100 paired-ended 2 ENCFF277SWU 2064598172 Michael Snyder, Stanford e0bbe8bafdfda55197fbb6608d9db3b2 SRA:SRR5111099 https://www.encodeproject.org/files/ENCFF197EBM/@@download/ENCFF197EBM.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFA/ released ENCFF452QYJ bam alignments ENCSR085DDI ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFXL1-human ENCAB208FGX DNA False 2016-12-05 ENCODE 2 100 ENCFF197EBM, ENCFF277SWU, ENCFF807MUK 3816720304 ENCODE Processing Pipeline b2435fb86932560dce524e162a73b8f3 https://www.encodeproject.org/files/ENCFF452QYJ/@@download/ENCFF452QYJ.bam hg19 released ENCFF474PWT bam alignments ENCSR085DDI ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFXL1-human ENCAB208FGX DNA False 2016-12-05 ENCODE 1 100 ENCFF358LFL, ENCFF575GFV, ENCFF807MUK 4732813602 ENCODE Processing Pipeline 332c532dda2f524a2176115778fbf574 https://www.encodeproject.org/files/ENCFF474PWT/@@download/ENCFF474PWT.bam hg19 released ENCFF421TRB bigWig signal p-value ENCSR085DDI ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFXL1-human ENCAB208FGX DNA False 2016-12-05 ENCODE 1 ENCFF474PWT, ENCFF581ZJL 1132952304 ENCODE Processing Pipeline 516cb24080ad77459b9a7764c2358e8d https://www.encodeproject.org/files/ENCFF421TRB/@@download/ENCFF421TRB.bigWig hg19 released ENCFF438OQD bigWig signal p-value ENCSR085DDI ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFXL1-human ENCAB208FGX DNA False 2016-12-05 ENCODE 2 ENCFF051LWI, ENCFF452QYJ 962564084 ENCODE Processing Pipeline cb2c326e237eecc143f9f85d31593ea8 https://www.encodeproject.org/files/ENCFF438OQD/@@download/ENCFF438OQD.bigWig hg19 released ENCFF800MTY bigWig signal p-value ENCSR085DDI ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFXL1-human ENCAB208FGX DNA False 2016-12-05 ENCODE 1, 2 ENCFF051LWI, ENCFF452QYJ, ENCFF474PWT, ENCFF581ZJL 1801084376 ENCODE Processing Pipeline 9aa3e9aa754f9c4c9d6e1065e3ac1701 https://www.encodeproject.org/files/ENCFF800MTY/@@download/ENCFF800MTY.bigWig hg19 released ENCFF270EGY bigWig fold change over control ENCSR085DDI ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFXL1-human ENCAB208FGX DNA False 2016-12-05 ENCODE 1 ENCFF474PWT, ENCFF581ZJL 1268889959 ENCODE Processing Pipeline 88d88fcfdcf4638ce119089fbda85ee9 https://www.encodeproject.org/files/ENCFF270EGY/@@download/ENCFF270EGY.bigWig hg19 released ENCFF379IHO bigWig fold change over control ENCSR085DDI ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFXL1-human ENCAB208FGX DNA False 2016-12-05 ENCODE 2 ENCFF051LWI, ENCFF452QYJ 1082788951 ENCODE Processing Pipeline 6884746a7a14f5d38d26972dcf2b6b69 https://www.encodeproject.org/files/ENCFF379IHO/@@download/ENCFF379IHO.bigWig hg19 released ENCFF906FIL bigWig fold change over control ENCSR085DDI ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFXL1-human ENCAB208FGX DNA False 2016-12-05 ENCODE 1, 2 ENCFF051LWI, ENCFF452QYJ, ENCFF474PWT, ENCFF581ZJL 2101478825 ENCODE Processing Pipeline 5c0b04ad90e60f11a7e2e2dce5e42ee9 https://www.encodeproject.org/files/ENCFF906FIL/@@download/ENCFF906FIL.bigWig hg19 released ENCFF804ZDO bed narrowPeak peaks ENCSR085DDI ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFXL1-human ENCAB208FGX DNA False 2016-12-05 ENCODE 1 ENCFF474PWT, ENCFF581ZJL 6601859 ENCODE Processing Pipeline 422447557aaa8aeac1f203d11e682a59 https://www.encodeproject.org/files/ENCFF804ZDO/@@download/ENCFF804ZDO.bed.gz hg19 released ENCFF666TVL bed narrowPeak peaks ENCSR085DDI ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFXL1-human ENCAB208FGX DNA False 2016-12-05 ENCODE 2 ENCFF051LWI, ENCFF452QYJ 6573285 ENCODE Processing Pipeline da592a6f1324752fe87aee24fb491ba2 https://www.encodeproject.org/files/ENCFF666TVL/@@download/ENCFF666TVL.bed.gz hg19 released ENCFF889VXE bigBed narrowPeak peaks ENCSR085DDI ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFXL1-human ENCAB208FGX DNA False 2016-12-05 ENCODE 1 ENCFF804ZDO 11062806 ENCODE Processing Pipeline 85c571e43bb88131e87fee4f696ae6a1 https://www.encodeproject.org/files/ENCFF889VXE/@@download/ENCFF889VXE.bigBed hg19 released ENCFF297LLA bed narrowPeak peaks ENCSR085DDI ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFXL1-human ENCAB208FGX DNA False 2016-12-05 ENCODE 1, 2 ENCFF051LWI, ENCFF452QYJ, ENCFF474PWT, ENCFF581ZJL 7182008 ENCODE Processing Pipeline 3c276986e7119a604cfce800230a06fb https://www.encodeproject.org/files/ENCFF297LLA/@@download/ENCFF297LLA.bed.gz hg19 released ENCFF091IKJ bigBed narrowPeak peaks ENCSR085DDI ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFXL1-human ENCAB208FGX DNA False 2016-12-05 ENCODE 2 ENCFF666TVL 13230539 ENCODE Processing Pipeline 57f2e2ed12333a2d3b635be96f11cea8 https://www.encodeproject.org/files/ENCFF091IKJ/@@download/ENCFF091IKJ.bigBed hg19 released ENCFF075EEO bigBed narrowPeak peaks ENCSR085DDI ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFXL1-human ENCAB208FGX DNA False 2016-12-05 ENCODE 1, 2 ENCFF297LLA 13071391 ENCODE Processing Pipeline c30eae40d7a787c5df5527c45624117d https://www.encodeproject.org/files/ENCFF075EEO/@@download/ENCFF075EEO.bigBed hg19 released ENCFF015PTS bed narrowPeak conservative idr thresholded peaks ENCSR085DDI ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFXL1-human ENCAB208FGX DNA False 2016-12-05 ENCODE 1, 2 ENCFF001TDO, ENCFF297LLA, ENCFF666TVL, ENCFF804ZDO 70197 ENCODE Processing Pipeline 413513dd7b67ac322964e26d032b4055 https://www.encodeproject.org/files/ENCFF015PTS/@@download/ENCFF015PTS.bed.gz hg19 released ENCFF382EED bigBed narrowPeak conservative idr thresholded peaks ENCSR085DDI ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFXL1-human ENCAB208FGX DNA False 2016-12-05 ENCODE 1, 2 ENCFF015PTS 190343 ENCODE Processing Pipeline b30af890964b2b447fa4504b9f063c4b https://www.encodeproject.org/files/ENCFF382EED/@@download/ENCFF382EED.bigBed hg19 released ENCFF986MHU bed narrowPeak optimal idr thresholded peaks ENCSR085DDI ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFXL1-human ENCAB208FGX DNA False 2016-12-05 ENCODE 1, 2 ENCFF001TDO, ENCFF297LLA, ENCFF666TVL, ENCFF804ZDO 116563 ENCODE Processing Pipeline a5428ff5fcb7004b76804e57d613d5fd https://www.encodeproject.org/files/ENCFF986MHU/@@download/ENCFF986MHU.bed.gz hg19 released ENCFF751JXD bigBed narrowPeak optimal idr thresholded peaks ENCSR085DDI ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFXL1-human ENCAB208FGX DNA False 2016-12-05 ENCODE 1, 2 ENCFF986MHU 262140 ENCODE Processing Pipeline 8df837d1bb7c8421836a3dde1687ef0a https://www.encodeproject.org/files/ENCFF751JXD/@@download/ENCFF751JXD.bigBed hg19 released ENCFF484ZNM bam unfiltered alignments ENCSR085DDI ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFXL1-human ENCAB208FGX DNA False 2016-12-05 ENCODE 2 100 ENCFF197EBM, ENCFF277SWU, ENCFF643CGH 4575634391 ENCODE Processing Pipeline b76296e717da49dbdd35b576d856651b https://www.encodeproject.org/files/ENCFF484ZNM/@@download/ENCFF484ZNM.bam GRCh38 released ENCFF390DUS bam unfiltered alignments ENCSR085DDI ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFXL1-human ENCAB208FGX DNA False 2016-12-05 ENCODE 1 100 ENCFF358LFL, ENCFF575GFV, ENCFF643CGH 5693252660 ENCODE Processing Pipeline ad9970a047787ac2072bbda44a99afc5 https://www.encodeproject.org/files/ENCFF390DUS/@@download/ENCFF390DUS.bam GRCh38 released ENCFF833ZOK bam alignments ENCSR085DDI ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFXL1-human ENCAB208FGX DNA False 2016-12-05 ENCODE 2 100 ENCFF197EBM, ENCFF277SWU, ENCFF643CGH 3819427161 ENCODE Processing Pipeline a0781964e825d8d9425d0b129a08a8a4 https://www.encodeproject.org/files/ENCFF833ZOK/@@download/ENCFF833ZOK.bam GRCh38 released ENCFF318SPV bam alignments ENCSR085DDI ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFXL1-human ENCAB208FGX DNA False 2016-12-05 ENCODE 1 100 ENCFF358LFL, ENCFF575GFV, ENCFF643CGH 4736350660 ENCODE Processing Pipeline 78751ed967ed07e4cd0b93129012f967 https://www.encodeproject.org/files/ENCFF318SPV/@@download/ENCFF318SPV.bam GRCh38 released ENCFF713FGJ bigWig signal p-value ENCSR085DDI ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFXL1-human ENCAB208FGX DNA False 2016-12-05 ENCODE 1 ENCFF318SPV, ENCFF910IKB 1254326831 ENCODE Processing Pipeline eb9f6e45e79d616123208d941fa6144c https://www.encodeproject.org/files/ENCFF713FGJ/@@download/ENCFF713FGJ.bigWig GRCh38 released ENCFF400AJJ bigWig signal p-value ENCSR085DDI ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFXL1-human ENCAB208FGX DNA False 2016-12-05 ENCODE 2 ENCFF227IZS, ENCFF833ZOK 946002470 ENCODE Processing Pipeline 3b54aabdda27f2039aa91ec79a84ef41 https://www.encodeproject.org/files/ENCFF400AJJ/@@download/ENCFF400AJJ.bigWig GRCh38 released ENCFF443INP bigWig signal p-value ENCSR085DDI ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFXL1-human ENCAB208FGX DNA False 2016-12-05 ENCODE 1, 2 ENCFF227IZS, ENCFF318SPV, ENCFF833ZOK, ENCFF910IKB 1797619064 ENCODE Processing Pipeline 1cdcb4ce174ea10bcbfdc95937944c2e https://www.encodeproject.org/files/ENCFF443INP/@@download/ENCFF443INP.bigWig GRCh38 released ENCFF182AYT bigWig fold change over control ENCSR085DDI ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFXL1-human ENCAB208FGX DNA False 2016-12-05 ENCODE 1 ENCFF318SPV, ENCFF910IKB 1265448134 ENCODE Processing Pipeline 4262ff6bbf023f0417ec64b03c2473a6 https://www.encodeproject.org/files/ENCFF182AYT/@@download/ENCFF182AYT.bigWig GRCh38 released ENCFF562HFT bigWig fold change over control ENCSR085DDI ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFXL1-human ENCAB208FGX DNA False 2016-12-05 ENCODE 2 ENCFF227IZS, ENCFF833ZOK 1083363397 ENCODE Processing Pipeline 3ef41513296ca91e62469ad8f5c1a857 https://www.encodeproject.org/files/ENCFF562HFT/@@download/ENCFF562HFT.bigWig GRCh38 released ENCFF302PLG bigWig fold change over control ENCSR085DDI ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFXL1-human ENCAB208FGX DNA False 2016-12-05 ENCODE 1, 2 ENCFF227IZS, ENCFF318SPV, ENCFF833ZOK, ENCFF910IKB 2068321061 ENCODE Processing Pipeline ae1eafd6969201a3db0addb07dd36be6 https://www.encodeproject.org/files/ENCFF302PLG/@@download/ENCFF302PLG.bigWig GRCh38 released ENCFF697UPK bed narrowPeak peaks ENCSR085DDI ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFXL1-human ENCAB208FGX DNA False 2016-12-05 ENCODE 1 ENCFF318SPV, ENCFF910IKB 6470064 ENCODE Processing Pipeline cabdf25c8664d4b276e9a4d74a15582f https://www.encodeproject.org/files/ENCFF697UPK/@@download/ENCFF697UPK.bed.gz GRCh38 released ENCFF734RJI bed narrowPeak peaks ENCSR085DDI ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFXL1-human ENCAB208FGX DNA False 2016-12-05 ENCODE 2 ENCFF227IZS, ENCFF833ZOK 6446115 ENCODE Processing Pipeline f65c21e8321457a36cd195892b87859b https://www.encodeproject.org/files/ENCFF734RJI/@@download/ENCFF734RJI.bed.gz GRCh38 released ENCFF270BVJ bed narrowPeak peaks ENCSR085DDI ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFXL1-human ENCAB208FGX DNA False 2016-12-05 ENCODE 1, 2 ENCFF227IZS, ENCFF318SPV, ENCFF833ZOK, ENCFF910IKB 7153186 ENCODE Processing Pipeline b7c5779df2a501f9b00886dad5492d5e https://www.encodeproject.org/files/ENCFF270BVJ/@@download/ENCFF270BVJ.bed.gz GRCh38 released ENCFF026CPU bigBed narrowPeak peaks ENCSR085DDI ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFXL1-human ENCAB208FGX DNA False 2016-12-05 ENCODE 1 ENCFF697UPK 11078252 ENCODE Processing Pipeline 1fc1b8e7e178dc9a85d48e7b959e8750 https://www.encodeproject.org/files/ENCFF026CPU/@@download/ENCFF026CPU.bigBed GRCh38 released ENCFF358CZS bigBed narrowPeak peaks ENCSR085DDI ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFXL1-human ENCAB208FGX DNA False 2016-12-05 ENCODE 2 ENCFF734RJI 13231025 ENCODE Processing Pipeline 11391cd5e9662daca8d2a20cf208f1e5 https://www.encodeproject.org/files/ENCFF358CZS/@@download/ENCFF358CZS.bigBed GRCh38 released ENCFF195UXR bigBed narrowPeak peaks ENCSR085DDI ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFXL1-human ENCAB208FGX DNA False 2016-12-05 ENCODE 1, 2 ENCFF270BVJ 13080653 ENCODE Processing Pipeline fa69bd55df079f57dd3e1d4c26316e44 https://www.encodeproject.org/files/ENCFF195UXR/@@download/ENCFF195UXR.bigBed GRCh38 released ENCFF408CMK bed narrowPeak conservative idr thresholded peaks ENCSR085DDI ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFXL1-human ENCAB208FGX DNA False 2016-12-05 ENCODE 1, 2 ENCFF270BVJ, ENCFF419RSJ, ENCFF697UPK, ENCFF734RJI 69195 ENCODE Processing Pipeline 444cf63da29da4f0c3fb90cfb12b82e3 https://www.encodeproject.org/files/ENCFF408CMK/@@download/ENCFF408CMK.bed.gz GRCh38 released ENCFF655ETV bigBed narrowPeak conservative idr thresholded peaks ENCSR085DDI ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFXL1-human ENCAB208FGX DNA False 2016-12-05 ENCODE 1, 2 ENCFF408CMK 189923 ENCODE Processing Pipeline 0601370e150c3de2362413d116f855a6 https://www.encodeproject.org/files/ENCFF655ETV/@@download/ENCFF655ETV.bigBed GRCh38 released ENCFF329STX bed narrowPeak optimal idr thresholded peaks ENCSR085DDI ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFXL1-human ENCAB208FGX DNA False 2016-12-05 ENCODE 1, 2 ENCFF270BVJ, ENCFF419RSJ, ENCFF697UPK, ENCFF734RJI 116079 ENCODE Processing Pipeline d1f2b121f7aa2350682803c87d5f63f2 https://www.encodeproject.org/files/ENCFF329STX/@@download/ENCFF329STX.bed.gz GRCh38 released ENCFF435ALE bigBed narrowPeak optimal idr thresholded peaks ENCSR085DDI ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFXL1-human ENCAB208FGX DNA False 2016-12-05 ENCODE 1, 2 ENCFF329STX 263245 ENCODE Processing Pipeline 6967fa2e4c9f6c42f2ef5b5fd6a3b4fe https://www.encodeproject.org/files/ENCFF435ALE/@@download/ENCFF435ALE.bigBed GRCh38 released ENCFF545DFQ fastq reads ENCSR760UVO ChIP-seq EFO:0002067 K562 cell line Homo sapiens KLF16-human ENCAB822KLV DNA False 2016-09-12 ENCODE 2 1 50 single-ended 1475733965 Richard Myers, HAIB 912c3c24a9efe43a7107d9131134a2fe SRA:SRR5339279 https://www.encodeproject.org/files/ENCFF545DFQ/@@download/ENCFF545DFQ.fastq.gz Illumina HiSeq 2000 /files/ENCFF993VKM/ released antibody characterized with exemption ENCFF855OMG fastq reads ENCSR760UVO ChIP-seq EFO:0002067 K562 cell line Homo sapiens KLF16-human ENCAB822KLV DNA False 2016-09-12 ENCODE 1 1 50 single-ended 1520743272 Richard Myers, HAIB 8004fe1d2de34c029d64ef985dcfaccf SRA:SRR5339278 https://www.encodeproject.org/files/ENCFF855OMG/@@download/ENCFF855OMG.fastq.gz Illumina HiSeq 2000 /files/ENCFF913JVQ/ released antibody characterized with exemption ENCFF596ABH bam unfiltered alignments ENCSR760UVO ChIP-seq EFO:0002067 K562 cell line Homo sapiens KLF16-human ENCAB822KLV DNA False 2016-09-12 ENCODE 1 50 ENCFF807MUK, ENCFF855OMG 1631253039 ENCODE Processing Pipeline 871c8bc8bce169f2a1e92633e49d25bd https://www.encodeproject.org/files/ENCFF596ABH/@@download/ENCFF596ABH.bam hg19 released antibody characterized with exemption ENCFF640OUB bam unfiltered alignments ENCSR760UVO ChIP-seq EFO:0002067 K562 cell line Homo sapiens KLF16-human ENCAB822KLV DNA False 2016-09-12 ENCODE 2 50 ENCFF545DFQ, ENCFF643CGH 1661317887 ENCODE Processing Pipeline 7a64d16e4437d97bfdf116ebd0c69e66 https://www.encodeproject.org/files/ENCFF640OUB/@@download/ENCFF640OUB.bam GRCh38 released antibody characterized with exemption ENCFF995SRK bam unfiltered alignments ENCSR760UVO ChIP-seq EFO:0002067 K562 cell line Homo sapiens KLF16-human ENCAB822KLV DNA False 2016-09-12 ENCODE 2 50 ENCFF545DFQ, ENCFF807MUK 1654893433 ENCODE Processing Pipeline 2783e433c0e44facf10c6dc24e8df9ca https://www.encodeproject.org/files/ENCFF995SRK/@@download/ENCFF995SRK.bam hg19 released antibody characterized with exemption ENCFF228FGR bam unfiltered alignments ENCSR760UVO ChIP-seq EFO:0002067 K562 cell line Homo sapiens KLF16-human ENCAB822KLV DNA False 2016-09-12 ENCODE 1 50 ENCFF643CGH, ENCFF855OMG 1636782812 ENCODE Processing Pipeline 27a2f733fc5e3af45983fe27e513430f https://www.encodeproject.org/files/ENCFF228FGR/@@download/ENCFF228FGR.bam GRCh38 released antibody characterized with exemption ENCFF749LRJ bam alignments ENCSR760UVO ChIP-seq EFO:0002067 K562 cell line Homo sapiens KLF16-human ENCAB822KLV DNA False 2016-09-12 ENCODE 2 50 ENCFF545DFQ, ENCFF643CGH 1257666090 ENCODE Processing Pipeline 46bdf485f39dabc7d78d1ee7ae134dd9 https://www.encodeproject.org/files/ENCFF749LRJ/@@download/ENCFF749LRJ.bam GRCh38 released antibody characterized with exemption ENCFF354IGM bam alignments ENCSR760UVO ChIP-seq EFO:0002067 K562 cell line Homo sapiens KLF16-human ENCAB822KLV DNA False 2016-09-12 ENCODE 1 50 ENCFF807MUK, ENCFF855OMG 1231149238 ENCODE Processing Pipeline d31533ad89e812751fa92dd1abdda1f4 https://www.encodeproject.org/files/ENCFF354IGM/@@download/ENCFF354IGM.bam hg19 released antibody characterized with exemption ENCFF356PMF bam alignments ENCSR760UVO ChIP-seq EFO:0002067 K562 cell line Homo sapiens KLF16-human ENCAB822KLV DNA False 2016-09-12 ENCODE 2 50 ENCFF545DFQ, ENCFF807MUK 1258158493 ENCODE Processing Pipeline 81b887684115ee16d2be154af102071d https://www.encodeproject.org/files/ENCFF356PMF/@@download/ENCFF356PMF.bam hg19 released antibody characterized with exemption ENCFF408TSG bam alignments ENCSR760UVO ChIP-seq EFO:0002067 K562 cell line Homo sapiens KLF16-human ENCAB822KLV DNA False 2016-09-12 ENCODE 1 50 ENCFF643CGH, ENCFF855OMG 1230585502 ENCODE Processing Pipeline 2c5fa36d486b3f941a09551cc95b8c7c https://www.encodeproject.org/files/ENCFF408TSG/@@download/ENCFF408TSG.bam GRCh38 released antibody characterized with exemption ENCFF373FDW bed narrowPeak peaks ENCSR760UVO ChIP-seq EFO:0002067 K562 cell line Homo sapiens KLF16-human ENCAB822KLV DNA False 2016-09-12 ENCODE 1, 2 ENCFF354IGM, ENCFF356PMF, ENCFF444TNY, ENCFF847YDJ 6696113 ENCODE Processing Pipeline 255615d0001ae16e53d98f85676ca8cc https://www.encodeproject.org/files/ENCFF373FDW/@@download/ENCFF373FDW.bed.gz hg19 released antibody characterized with exemption ENCFF962PLB bigWig signal p-value ENCSR760UVO ChIP-seq EFO:0002067 K562 cell line Homo sapiens KLF16-human ENCAB822KLV DNA False 2016-09-12 ENCODE 1, 2 ENCFF354IGM, ENCFF356PMF, ENCFF444TNY, ENCFF847YDJ 1195920673 ENCODE Processing Pipeline e732c6173f4cd6670c33513534b1e9a4 https://www.encodeproject.org/files/ENCFF962PLB/@@download/ENCFF962PLB.bigWig hg19 released antibody characterized with exemption ENCFF898RYD bigWig signal p-value ENCSR760UVO ChIP-seq EFO:0002067 K562 cell line Homo sapiens KLF16-human ENCAB822KLV DNA False 2016-09-12 ENCODE 1 ENCFF354IGM, ENCFF444TNY, ENCFF847YDJ 932163904 ENCODE Processing Pipeline a1dd7d00f737407c72cd9efebfa4bac3 https://www.encodeproject.org/files/ENCFF898RYD/@@download/ENCFF898RYD.bigWig hg19 released antibody characterized with exemption ENCFF052NYE bigWig signal p-value ENCSR760UVO ChIP-seq EFO:0002067 K562 cell line Homo sapiens KLF16-human ENCAB822KLV DNA False 2016-09-12 ENCODE 2 ENCFF356PMF, ENCFF444TNY, ENCFF847YDJ 1083190001 ENCODE Processing Pipeline 1a00eda9b7da759c6a48635222b1c781 https://www.encodeproject.org/files/ENCFF052NYE/@@download/ENCFF052NYE.bigWig hg19 released antibody characterized with exemption ENCFF370VGF bigWig fold change over control ENCSR760UVO ChIP-seq EFO:0002067 K562 cell line Homo sapiens KLF16-human ENCAB822KLV DNA False 2016-09-12 ENCODE 1 ENCFF354IGM, ENCFF444TNY, ENCFF847YDJ 746633169 ENCODE Processing Pipeline 78365e45687f322c91353df4873899ac https://www.encodeproject.org/files/ENCFF370VGF/@@download/ENCFF370VGF.bigWig hg19 released antibody characterized with exemption ENCFF844HBQ bed narrowPeak optimal idr thresholded peaks ENCSR760UVO ChIP-seq EFO:0002067 K562 cell line Homo sapiens KLF16-human ENCAB822KLV DNA False 2016-09-12 ENCODE 1, 2 ENCFF001TDO, ENCFF077SAE, ENCFF373FDW, ENCFF939WYL 312304 ENCODE Processing Pipeline b304df9dcf031ea1956760833ad45da5 https://www.encodeproject.org/files/ENCFF844HBQ/@@download/ENCFF844HBQ.bed.gz hg19 released antibody characterized with exemption ENCFF161TZI bigWig fold change over control ENCSR760UVO ChIP-seq EFO:0002067 K562 cell line Homo sapiens KLF16-human ENCAB822KLV DNA False 2016-09-12 ENCODE 1, 2 ENCFF354IGM, ENCFF356PMF, ENCFF444TNY, ENCFF847YDJ 1237402083 ENCODE Processing Pipeline 3d4e1fcef09a19938bca5894a677ed1d https://www.encodeproject.org/files/ENCFF161TZI/@@download/ENCFF161TZI.bigWig hg19 released antibody characterized with exemption ENCFF077SAE bed narrowPeak peaks ENCSR760UVO ChIP-seq EFO:0002067 K562 cell line Homo sapiens KLF16-human ENCAB822KLV DNA False 2016-09-12 ENCODE 2 ENCFF356PMF, ENCFF444TNY, ENCFF847YDJ 6051932 ENCODE Processing Pipeline dede322ac318214dd1b720b562e528c6 https://www.encodeproject.org/files/ENCFF077SAE/@@download/ENCFF077SAE.bed.gz hg19 released antibody characterized with exemption ENCFF135CVS bigBed narrowPeak peaks ENCSR760UVO ChIP-seq EFO:0002067 K562 cell line Homo sapiens KLF16-human ENCAB822KLV DNA False 2016-09-12 ENCODE 1, 2 ENCFF373FDW 13708298 ENCODE Processing Pipeline 7b1cda334714ae509bcb289a87f3198a https://www.encodeproject.org/files/ENCFF135CVS/@@download/ENCFF135CVS.bigBed hg19 released antibody characterized with exemption ENCFF958PWG bigWig fold change over control ENCSR760UVO ChIP-seq EFO:0002067 K562 cell line Homo sapiens KLF16-human ENCAB822KLV DNA False 2016-09-12 ENCODE 2 ENCFF356PMF, ENCFF444TNY, ENCFF847YDJ 843297666 ENCODE Processing Pipeline cdfbf5b3492ed7811bc4765181545fc8 https://www.encodeproject.org/files/ENCFF958PWG/@@download/ENCFF958PWG.bigWig hg19 released antibody characterized with exemption ENCFF163FGN bigBed narrowPeak peaks ENCSR760UVO ChIP-seq EFO:0002067 K562 cell line Homo sapiens KLF16-human ENCAB822KLV DNA False 2016-09-12 ENCODE 1 ENCFF939WYL 11465874 ENCODE Processing Pipeline d3e989e5c10e131933edcf99dd890208 https://www.encodeproject.org/files/ENCFF163FGN/@@download/ENCFF163FGN.bigBed hg19 released antibody characterized with exemption ENCFF912KUK bigBed narrowPeak peaks ENCSR760UVO ChIP-seq EFO:0002067 K562 cell line Homo sapiens KLF16-human ENCAB822KLV DNA False 2016-09-12 ENCODE 2 ENCFF077SAE 11421824 ENCODE Processing Pipeline d4360b89ce701f6376574ae195b1129b https://www.encodeproject.org/files/ENCFF912KUK/@@download/ENCFF912KUK.bigBed hg19 released antibody characterized with exemption ENCFF986JLG bigBed narrowPeak conservative idr thresholded peaks ENCSR760UVO ChIP-seq EFO:0002067 K562 cell line Homo sapiens KLF16-human ENCAB822KLV DNA False 2016-09-12 ENCODE 1, 2 ENCFF063BGI 540888 ENCODE Processing Pipeline a93335adafbf990ed1f33ef09cc59c11 https://www.encodeproject.org/files/ENCFF986JLG/@@download/ENCFF986JLG.bigBed hg19 released antibody characterized with exemption ENCFF016MFS bigBed narrowPeak optimal idr thresholded peaks ENCSR760UVO ChIP-seq EFO:0002067 K562 cell line Homo sapiens KLF16-human ENCAB822KLV DNA False 2016-09-12 ENCODE 1, 2 ENCFF844HBQ 584805 ENCODE Processing Pipeline c3c8479c5cf32538c1207ef353c7bf6a https://www.encodeproject.org/files/ENCFF016MFS/@@download/ENCFF016MFS.bigBed hg19 released antibody characterized with exemption ENCFF939WYL bed narrowPeak peaks ENCSR760UVO ChIP-seq EFO:0002067 K562 cell line Homo sapiens KLF16-human ENCAB822KLV DNA False 2016-09-12 ENCODE 1 ENCFF354IGM, ENCFF444TNY, ENCFF847YDJ 6086390 ENCODE Processing Pipeline d487c96986116ccb87b786d9ddfd69c7 https://www.encodeproject.org/files/ENCFF939WYL/@@download/ENCFF939WYL.bed.gz hg19 released antibody characterized with exemption ENCFF063BGI bed narrowPeak conservative idr thresholded peaks ENCSR760UVO ChIP-seq EFO:0002067 K562 cell line Homo sapiens KLF16-human ENCAB822KLV DNA False 2016-09-12 ENCODE 1, 2 ENCFF001TDO, ENCFF077SAE, ENCFF373FDW, ENCFF939WYL 279830 ENCODE Processing Pipeline 05c50ae41a8b131604292e1cbca9838d https://www.encodeproject.org/files/ENCFF063BGI/@@download/ENCFF063BGI.bed.gz hg19 released antibody characterized with exemption ENCFF601WHJ bigWig signal p-value ENCSR760UVO ChIP-seq EFO:0002067 K562 cell line Homo sapiens KLF16-human ENCAB822KLV DNA False 2016-09-12 ENCODE 1 ENCFF092PMQ, ENCFF162ZOO, ENCFF408TSG 940130062 ENCODE Processing Pipeline b787691939840bb568660d9dbeed1a58 https://www.encodeproject.org/files/ENCFF601WHJ/@@download/ENCFF601WHJ.bigWig GRCh38 released antibody characterized with exemption ENCFF720CZD bigWig signal p-value ENCSR760UVO ChIP-seq EFO:0002067 K562 cell line Homo sapiens KLF16-human ENCAB822KLV DNA False 2016-09-12 ENCODE 2 ENCFF092PMQ, ENCFF162ZOO, ENCFF749LRJ 947115561 ENCODE Processing Pipeline 01dce0ffb04930967f100b4613f9a1dd https://www.encodeproject.org/files/ENCFF720CZD/@@download/ENCFF720CZD.bigWig GRCh38 released antibody characterized with exemption ENCFF237STA bigWig signal p-value ENCSR760UVO ChIP-seq EFO:0002067 K562 cell line Homo sapiens KLF16-human ENCAB822KLV DNA False 2016-09-12 ENCODE 1, 2 ENCFF092PMQ, ENCFF162ZOO, ENCFF408TSG, ENCFF749LRJ 1234643491 ENCODE Processing Pipeline b1bfc6b921ca4f2c85979b6c8eabc0c4 https://www.encodeproject.org/files/ENCFF237STA/@@download/ENCFF237STA.bigWig GRCh38 released antibody characterized with exemption ENCFF834NIU bigWig fold change over control ENCSR760UVO ChIP-seq EFO:0002067 K562 cell line Homo sapiens KLF16-human ENCAB822KLV DNA False 2016-09-12 ENCODE 1 ENCFF092PMQ, ENCFF162ZOO, ENCFF408TSG 761376638 ENCODE Processing Pipeline c058b09b9b3a46826bf8ad83a8d40082 https://www.encodeproject.org/files/ENCFF834NIU/@@download/ENCFF834NIU.bigWig GRCh38 released antibody characterized with exemption ENCFF127LEK bigWig fold change over control ENCSR760UVO ChIP-seq EFO:0002067 K562 cell line Homo sapiens KLF16-human ENCAB822KLV DNA False 2016-09-12 ENCODE 2 ENCFF092PMQ, ENCFF162ZOO, ENCFF749LRJ 838156251 ENCODE Processing Pipeline b310faf45852fafc51ba848844de2e1f https://www.encodeproject.org/files/ENCFF127LEK/@@download/ENCFF127LEK.bigWig GRCh38 released antibody characterized with exemption ENCFF845AHN bigWig fold change over control ENCSR760UVO ChIP-seq EFO:0002067 K562 cell line Homo sapiens KLF16-human ENCAB822KLV DNA False 2016-09-12 ENCODE 1, 2 ENCFF092PMQ, ENCFF162ZOO, ENCFF408TSG, ENCFF749LRJ 1240301089 ENCODE Processing Pipeline 8777c9e4b09028749ed72c6c0950345b https://www.encodeproject.org/files/ENCFF845AHN/@@download/ENCFF845AHN.bigWig GRCh38 released antibody characterized with exemption ENCFF298RGN bed narrowPeak peaks ENCSR760UVO ChIP-seq EFO:0002067 K562 cell line Homo sapiens KLF16-human ENCAB822KLV DNA False 2016-09-12 ENCODE 1, 2 ENCFF092PMQ, ENCFF162ZOO, ENCFF408TSG, ENCFF749LRJ 6551750 ENCODE Processing Pipeline 59b5c167384b9b8df5ffd6ca20a2e722 https://www.encodeproject.org/files/ENCFF298RGN/@@download/ENCFF298RGN.bed.gz GRCh38 released antibody characterized with exemption ENCFF576FKD bed narrowPeak peaks ENCSR760UVO ChIP-seq EFO:0002067 K562 cell line Homo sapiens KLF16-human ENCAB822KLV DNA False 2016-09-12 ENCODE 1 ENCFF092PMQ, ENCFF162ZOO, ENCFF408TSG 5898968 ENCODE Processing Pipeline 12f62e333fe9f0f6f20cfe7c040ac0c7 https://www.encodeproject.org/files/ENCFF576FKD/@@download/ENCFF576FKD.bed.gz GRCh38 released antibody characterized with exemption ENCFF379LKE bed narrowPeak optimal idr thresholded peaks ENCSR760UVO ChIP-seq EFO:0002067 K562 cell line Homo sapiens KLF16-human ENCAB822KLV DNA False 2016-09-12 ENCODE 1, 2 ENCFF298RGN, ENCFF419RSJ, ENCFF576FKD, ENCFF601FGL 310263 ENCODE Processing Pipeline 933a765031fc18c258b3ed9ebf3c4866 https://www.encodeproject.org/files/ENCFF379LKE/@@download/ENCFF379LKE.bed.gz GRCh38 released antibody characterized with exemption ENCFF601FGL bed narrowPeak peaks ENCSR760UVO ChIP-seq EFO:0002067 K562 cell line Homo sapiens KLF16-human ENCAB822KLV DNA False 2016-09-12 ENCODE 2 ENCFF092PMQ, ENCFF162ZOO, ENCFF749LRJ 5961921 ENCODE Processing Pipeline f31122c313780f824795c80a6e5304b9 https://www.encodeproject.org/files/ENCFF601FGL/@@download/ENCFF601FGL.bed.gz GRCh38 released antibody characterized with exemption ENCFF013GMQ bigBed narrowPeak peaks ENCSR760UVO ChIP-seq EFO:0002067 K562 cell line Homo sapiens KLF16-human ENCAB822KLV DNA False 2016-09-12 ENCODE 1 ENCFF576FKD 11445683 ENCODE Processing Pipeline 93cc8ec8030e9231e937939f53b8e75f https://www.encodeproject.org/files/ENCFF013GMQ/@@download/ENCFF013GMQ.bigBed GRCh38 released antibody characterized with exemption ENCFF432FCA bigBed narrowPeak peaks ENCSR760UVO ChIP-seq EFO:0002067 K562 cell line Homo sapiens KLF16-human ENCAB822KLV DNA False 2016-09-12 ENCODE 2 ENCFF601FGL 11441601 ENCODE Processing Pipeline dfa6da6a36657673944429fb877137ce https://www.encodeproject.org/files/ENCFF432FCA/@@download/ENCFF432FCA.bigBed GRCh38 released antibody characterized with exemption ENCFF882NVQ bigBed narrowPeak peaks ENCSR760UVO ChIP-seq EFO:0002067 K562 cell line Homo sapiens KLF16-human ENCAB822KLV DNA False 2016-09-12 ENCODE 1, 2 ENCFF298RGN 13712102 ENCODE Processing Pipeline 62e5fbc55b18fce09a71fd4e30e6e0df https://www.encodeproject.org/files/ENCFF882NVQ/@@download/ENCFF882NVQ.bigBed GRCh38 released antibody characterized with exemption ENCFF512PBA bed narrowPeak conservative idr thresholded peaks ENCSR760UVO ChIP-seq EFO:0002067 K562 cell line Homo sapiens KLF16-human ENCAB822KLV DNA False 2016-09-12 ENCODE 1, 2 ENCFF298RGN, ENCFF419RSJ, ENCFF576FKD, ENCFF601FGL 283889 ENCODE Processing Pipeline 07a616f9dbdfaa1d5c7a2f9886e2b00f https://www.encodeproject.org/files/ENCFF512PBA/@@download/ENCFF512PBA.bed.gz GRCh38 released antibody characterized with exemption ENCFF589PMC bigBed narrowPeak optimal idr thresholded peaks ENCSR760UVO ChIP-seq EFO:0002067 K562 cell line Homo sapiens KLF16-human ENCAB822KLV DNA False 2016-09-12 ENCODE 1, 2 ENCFF379LKE 584493 ENCODE Processing Pipeline 1964ae98490573f6f5578426d8703fa4 https://www.encodeproject.org/files/ENCFF589PMC/@@download/ENCFF589PMC.bigBed GRCh38 released antibody characterized with exemption ENCFF924OOV bigBed narrowPeak conservative idr thresholded peaks ENCSR760UVO ChIP-seq EFO:0002067 K562 cell line Homo sapiens KLF16-human ENCAB822KLV DNA False 2016-09-12 ENCODE 1, 2 ENCFF512PBA 547663 ENCODE Processing Pipeline 6614125cb3b29cdf283d274a5f51d606 https://www.encodeproject.org/files/ENCFF924OOV/@@download/ENCFF924OOV.bigBed GRCh38 released antibody characterized with exemption ENCFF513XHM fastq reads ENCSR100UQX ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAF9B-human ENCAB862MHS DNA False 2018-01-26 ENCODE 1 1 100 paired-ended 1 ENCFF451LYL 3787547433 Michael Snyder, Stanford 740a5e534bda14b2e20fa3f675808b80 https://www.encodeproject.org/files/ENCFF513XHM/@@download/ENCFF513XHM.fastq.gz Illumina HiSeq 4000 /files/ENCFF498JMO/ released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF571LSL fastq reads ENCSR100UQX ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAF9B-human ENCAB862MHS DNA False 2018-01-26 ENCODE 2 1 100 paired-ended 2 ENCFF497SRX 3602184914 Michael Snyder, Stanford c75bdbf5f30e018783d567b07fb5fb9b https://www.encodeproject.org/files/ENCFF571LSL/@@download/ENCFF571LSL.fastq.gz Illumina HiSeq 4000 /files/ENCFF837MIV/ released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF451LYL fastq reads ENCSR100UQX ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAF9B-human ENCAB862MHS DNA False 2018-01-26 ENCODE 1 1 100 paired-ended 2 ENCFF513XHM 4095288382 Michael Snyder, Stanford da7e78cc5e14defc39a18129998919d7 https://www.encodeproject.org/files/ENCFF451LYL/@@download/ENCFF451LYL.fastq.gz Illumina HiSeq 4000 /files/ENCFF502GTS/ released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF497SRX fastq reads ENCSR100UQX ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAF9B-human ENCAB862MHS DNA False 2018-01-26 ENCODE 2 1 100 paired-ended 1 ENCFF571LSL 3229283929 Michael Snyder, Stanford fdab5846f521030ae89bf6656a9c28c3 https://www.encodeproject.org/files/ENCFF497SRX/@@download/ENCFF497SRX.fastq.gz Illumina HiSeq 4000 /files/ENCFF259GQA/ released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF250GVB bam unfiltered alignments ENCSR100UQX ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAF9B-human ENCAB862MHS DNA False 2018-01-26 ENCODE 2 100 ENCFF497SRX, ENCFF571LSL, ENCFF807MUK 6437295660 ENCODE Processing Pipeline cea3e45ca46a1767ceb469f18293f63e https://www.encodeproject.org/files/ENCFF250GVB/@@download/ENCFF250GVB.bam hg19 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF742INW bam unfiltered alignments ENCSR100UQX ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAF9B-human ENCAB862MHS DNA False 2018-01-26 ENCODE 1 100 ENCFF451LYL, ENCFF513XHM, ENCFF807MUK 7455786411 ENCODE Processing Pipeline e98728f31128e862d2e2735ffa0759f6 https://www.encodeproject.org/files/ENCFF742INW/@@download/ENCFF742INW.bam hg19 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF643VVA bam unfiltered alignments ENCSR100UQX ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAF9B-human ENCAB862MHS DNA False 2018-01-26 ENCODE 2 100 ENCFF497SRX, ENCFF571LSL, ENCFF643CGH 6444577788 ENCODE Processing Pipeline f29d839176913a1e05d7f8152fbddf57 https://www.encodeproject.org/files/ENCFF643VVA/@@download/ENCFF643VVA.bam GRCh38 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF008GDP bam unfiltered alignments ENCSR100UQX ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAF9B-human ENCAB862MHS DNA False 2018-01-26 ENCODE 1 100 ENCFF451LYL, ENCFF513XHM, ENCFF643CGH 7467049722 ENCODE Processing Pipeline ebafccea9885e81b8ddad9e376e5aa94 https://www.encodeproject.org/files/ENCFF008GDP/@@download/ENCFF008GDP.bam GRCh38 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF489ACL bam alignments ENCSR100UQX ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAF9B-human ENCAB862MHS DNA False 2018-01-26 ENCODE 2 100 ENCFF497SRX, ENCFF571LSL, ENCFF807MUK 4739484406 ENCODE Processing Pipeline a8116f9bb5e713dfff9174b2e0c17c44 https://www.encodeproject.org/files/ENCFF489ACL/@@download/ENCFF489ACL.bam hg19 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF550MIV bam alignments ENCSR100UQX ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAF9B-human ENCAB862MHS DNA False 2018-01-26 ENCODE 2 100 ENCFF497SRX, ENCFF571LSL, ENCFF643CGH 4745639790 ENCODE Processing Pipeline b4832847102ce0373398cdb7a6018e92 https://www.encodeproject.org/files/ENCFF550MIV/@@download/ENCFF550MIV.bam GRCh38 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF756OQH bam alignments ENCSR100UQX ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAF9B-human ENCAB862MHS DNA False 2018-01-26 ENCODE 1 100 ENCFF451LYL, ENCFF513XHM, ENCFF643CGH 5935525124 ENCODE Processing Pipeline 3ba1ae58c188d49e2f245f147a8dcabf https://www.encodeproject.org/files/ENCFF756OQH/@@download/ENCFF756OQH.bam GRCh38 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF970LPR bam alignments ENCSR100UQX ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAF9B-human ENCAB862MHS DNA False 2018-01-26 ENCODE 1 100 ENCFF451LYL, ENCFF513XHM, ENCFF807MUK 5923970706 ENCODE Processing Pipeline 076508ef1c4867218af71076d7180df5 https://www.encodeproject.org/files/ENCFF970LPR/@@download/ENCFF970LPR.bam hg19 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF697XWY bed narrowPeak peaks ENCSR100UQX ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAF9B-human ENCAB862MHS DNA False 2018-01-26 ENCODE 1 ENCFF160VXC, ENCFF834TUP, ENCFF970LPR 7113255 ENCODE Processing Pipeline e189fec681cec63f4395946a62ac2d35 https://www.encodeproject.org/files/ENCFF697XWY/@@download/ENCFF697XWY.bed.gz hg19 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF673PFV bigBed narrowPeak peaks ENCSR100UQX ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAF9B-human ENCAB862MHS DNA False 2018-01-26 ENCODE 1 ENCFF697XWY 13191756 ENCODE Processing Pipeline f1f2dce1748e0e476e83a30890f142f5 https://www.encodeproject.org/files/ENCFF673PFV/@@download/ENCFF673PFV.bigBed hg19 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF267EQE bigWig signal p-value ENCSR100UQX ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAF9B-human ENCAB862MHS DNA False 2018-01-26 ENCODE 1 ENCFF160VXC, ENCFF834TUP, ENCFF970LPR 1791563926 ENCODE Processing Pipeline 1268b94590f85690f7e460a53ba1fbe1 https://www.encodeproject.org/files/ENCFF267EQE/@@download/ENCFF267EQE.bigWig hg19 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF638ZRZ bigWig fold change over control ENCSR100UQX ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAF9B-human ENCAB862MHS DNA False 2018-01-26 ENCODE 1 ENCFF160VXC, ENCFF834TUP, ENCFF970LPR 2124179616 ENCODE Processing Pipeline 19a4330bfbaa2ce5e2a2b16f918cad6a https://www.encodeproject.org/files/ENCFF638ZRZ/@@download/ENCFF638ZRZ.bigWig hg19 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF540IHF bigWig signal p-value ENCSR100UQX ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAF9B-human ENCAB862MHS DNA False 2018-01-26 ENCODE 1, 2 ENCFF160VXC, ENCFF489ACL, ENCFF834TUP, ENCFF970LPR 2390186597 ENCODE Processing Pipeline 44836400d4267a13aacbe55ef41d83be https://www.encodeproject.org/files/ENCFF540IHF/@@download/ENCFF540IHF.bigWig hg19 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF830MKJ bigWig fold change over control ENCSR100UQX ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAF9B-human ENCAB862MHS DNA False 2018-01-26 ENCODE 1, 2 ENCFF160VXC, ENCFF489ACL, ENCFF834TUP, ENCFF970LPR 2632200998 ENCODE Processing Pipeline 798eb3dbf7aa102c156999dd7ab95297 https://www.encodeproject.org/files/ENCFF830MKJ/@@download/ENCFF830MKJ.bigWig hg19 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF426NDH bigWig signal p-value ENCSR100UQX ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAF9B-human ENCAB862MHS DNA False 2018-01-26 ENCODE 1 ENCFF712WXB, ENCFF756OQH, ENCFF790TAN 1903157376 ENCODE Processing Pipeline 3662b9dcf77374226fa43917b76a190e https://www.encodeproject.org/files/ENCFF426NDH/@@download/ENCFF426NDH.bigWig GRCh38 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF449ZBD bed narrowPeak conservative idr thresholded peaks ENCSR100UQX ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAF9B-human ENCAB862MHS DNA False 2018-01-26 ENCODE 1, 2 ENCFF272TLJ, ENCFF358CUD, ENCFF419RSJ, ENCFF493BPW 286380 ENCODE Processing Pipeline 741eda8be70214d7abc12cd7b68fb252 https://www.encodeproject.org/files/ENCFF449ZBD/@@download/ENCFF449ZBD.bed.gz GRCh38 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF317IVJ bigBed narrowPeak conservative idr thresholded peaks ENCSR100UQX ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAF9B-human ENCAB862MHS DNA False 2018-01-26 ENCODE 1, 2 ENCFF449ZBD 624957 ENCODE Processing Pipeline 13c0adf57d89ad997239868bcc2cceaf https://www.encodeproject.org/files/ENCFF317IVJ/@@download/ENCFF317IVJ.bigBed GRCh38 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF223HDM bed narrowPeak optimal idr thresholded peaks ENCSR100UQX ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAF9B-human ENCAB862MHS DNA False 2018-01-26 ENCODE 1, 2 ENCFF272TLJ, ENCFF358CUD, ENCFF419RSJ, ENCFF493BPW 283821 ENCODE Processing Pipeline ff04f0f1d6729a6be56ab938910399d6 https://www.encodeproject.org/files/ENCFF223HDM/@@download/ENCFF223HDM.bed.gz GRCh38 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF457NXT bigWig signal p-value ENCSR100UQX ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAF9B-human ENCAB862MHS DNA False 2018-01-26 ENCODE 2 ENCFF489ACL, ENCFF834TUP 1492321949 ENCODE Processing Pipeline 166c19aae8bc0b7885ce4157e1c950ef https://www.encodeproject.org/files/ENCFF457NXT/@@download/ENCFF457NXT.bigWig hg19 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF238CDA bed narrowPeak peaks ENCSR100UQX ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAF9B-human ENCAB862MHS DNA False 2018-01-26 ENCODE 1, 2 ENCFF160VXC, ENCFF489ACL, ENCFF834TUP, ENCFF970LPR 7227527 ENCODE Processing Pipeline b14d68921c194c28ad60d9d651545ea6 https://www.encodeproject.org/files/ENCFF238CDA/@@download/ENCFF238CDA.bed.gz hg19 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF564OPF bigWig fold change over control ENCSR100UQX ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAF9B-human ENCAB862MHS DNA False 2018-01-26 ENCODE 2 ENCFF550MIV, ENCFF712WXB 1507784474 ENCODE Processing Pipeline 4f53523d02bac33b1f04852289c32d2f https://www.encodeproject.org/files/ENCFF564OPF/@@download/ENCFF564OPF.bigWig GRCh38 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF380IDS bigBed narrowPeak optimal idr thresholded peaks ENCSR100UQX ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAF9B-human ENCAB862MHS DNA False 2018-01-26 ENCODE 1, 2 ENCFF223HDM 627115 ENCODE Processing Pipeline ccf1ad75253fdc0e24edc4035d9f4e10 https://www.encodeproject.org/files/ENCFF380IDS/@@download/ENCFF380IDS.bigBed GRCh38 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF656UAV bed narrowPeak peaks ENCSR100UQX ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAF9B-human ENCAB862MHS DNA False 2018-01-26 ENCODE 2 ENCFF489ACL, ENCFF834TUP 6972023 ENCODE Processing Pipeline f3f1963e6d236b562fc35d5b12e9b8cc https://www.encodeproject.org/files/ENCFF656UAV/@@download/ENCFF656UAV.bed.gz hg19 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF896UNK bigBed narrowPeak peaks ENCSR100UQX ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAF9B-human ENCAB862MHS DNA False 2018-01-26 ENCODE 1, 2 ENCFF238CDA 12983260 ENCODE Processing Pipeline c7d8a788e87476a2a0ee141347584509 https://www.encodeproject.org/files/ENCFF896UNK/@@download/ENCFF896UNK.bigBed hg19 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF021VGP bigWig fold change over control ENCSR100UQX ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAF9B-human ENCAB862MHS DNA False 2018-01-26 ENCODE 2 ENCFF489ACL, ENCFF834TUP 1510226676 ENCODE Processing Pipeline a15a878065c51e75f0a795f7edd84905 https://www.encodeproject.org/files/ENCFF021VGP/@@download/ENCFF021VGP.bigWig hg19 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF633YMT bigBed narrowPeak peaks ENCSR100UQX ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAF9B-human ENCAB862MHS DNA False 2018-01-26 ENCODE 2 ENCFF656UAV 13181668 ENCODE Processing Pipeline 200610f71d5a6d1c5e6206fc9141dd36 https://www.encodeproject.org/files/ENCFF633YMT/@@download/ENCFF633YMT.bigBed hg19 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF785HXY bed narrowPeak optimal idr thresholded peaks ENCSR100UQX ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAF9B-human ENCAB862MHS DNA False 2018-01-26 ENCODE 1, 2 ENCFF001TDO, ENCFF238CDA, ENCFF656UAV, ENCFF697XWY 287268 ENCODE Processing Pipeline dee290c401ff14a52a21cbe5f1a21352 https://www.encodeproject.org/files/ENCFF785HXY/@@download/ENCFF785HXY.bed.gz hg19 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF489AZN bigBed narrowPeak optimal idr thresholded peaks ENCSR100UQX ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAF9B-human ENCAB862MHS DNA False 2018-01-26 ENCODE 1, 2 ENCFF785HXY 622157 ENCODE Processing Pipeline 1f86b123ad4053924f9a691a13cc84d5 https://www.encodeproject.org/files/ENCFF489AZN/@@download/ENCFF489AZN.bigBed hg19 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF059UCT bigWig signal p-value ENCSR100UQX ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAF9B-human ENCAB862MHS DNA False 2018-01-26 ENCODE 2 ENCFF550MIV, ENCFF712WXB 1456334475 ENCODE Processing Pipeline 3a0e811968f1f7a436815b012233f44e https://www.encodeproject.org/files/ENCFF059UCT/@@download/ENCFF059UCT.bigWig GRCh38 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF008LLM bigBed narrowPeak peaks ENCSR100UQX ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAF9B-human ENCAB862MHS DNA False 2018-01-26 ENCODE 1, 2 ENCFF272TLJ 13000070 ENCODE Processing Pipeline 0b9fcfbbe117854f4040d58c7c9d83d6 https://www.encodeproject.org/files/ENCFF008LLM/@@download/ENCFF008LLM.bigBed GRCh38 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF786VJU bigWig fold change over control ENCSR100UQX ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAF9B-human ENCAB862MHS DNA False 2018-01-26 ENCODE 1 ENCFF712WXB, ENCFF756OQH, ENCFF790TAN 2127074357 ENCODE Processing Pipeline b5256d08aef8f0d086584cfbc186cbc0 https://www.encodeproject.org/files/ENCFF786VJU/@@download/ENCFF786VJU.bigWig GRCh38 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF358CUD bed narrowPeak peaks ENCSR100UQX ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAF9B-human ENCAB862MHS DNA False 2018-01-26 ENCODE 1 ENCFF712WXB, ENCFF756OQH, ENCFF790TAN 7119039 ENCODE Processing Pipeline 221fc1c16f7cde030da10e55e81f11f2 https://www.encodeproject.org/files/ENCFF358CUD/@@download/ENCFF358CUD.bed.gz GRCh38 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF694SPB bigBed narrowPeak peaks ENCSR100UQX ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAF9B-human ENCAB862MHS DNA False 2018-01-26 ENCODE 1 ENCFF358CUD 13209870 ENCODE Processing Pipeline 7d9fbecb33dc69c9592aa04cbfd4d8bf https://www.encodeproject.org/files/ENCFF694SPB/@@download/ENCFF694SPB.bigBed GRCh38 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF105JFB bigWig signal p-value ENCSR100UQX ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAF9B-human ENCAB862MHS DNA False 2018-01-26 ENCODE 1, 2 ENCFF550MIV, ENCFF712WXB, ENCFF756OQH, ENCFF790TAN 2394156121 ENCODE Processing Pipeline ece87072a90b5311449f38bc27c1adb2 https://www.encodeproject.org/files/ENCFF105JFB/@@download/ENCFF105JFB.bigWig GRCh38 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF272TLJ bed narrowPeak peaks ENCSR100UQX ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAF9B-human ENCAB862MHS DNA False 2018-01-26 ENCODE 1, 2 ENCFF550MIV, ENCFF712WXB, ENCFF756OQH, ENCFF790TAN 7229012 ENCODE Processing Pipeline 66672a7ac2fbf473ec795a19430bab23 https://www.encodeproject.org/files/ENCFF272TLJ/@@download/ENCFF272TLJ.bed.gz GRCh38 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF414ANN bigWig fold change over control ENCSR100UQX ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAF9B-human ENCAB862MHS DNA False 2018-01-26 ENCODE 1, 2 ENCFF550MIV, ENCFF712WXB, ENCFF756OQH, ENCFF790TAN 2636531825 ENCODE Processing Pipeline e693a1b07665934c86ac8a1b6f468f94 https://www.encodeproject.org/files/ENCFF414ANN/@@download/ENCFF414ANN.bigWig GRCh38 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF493BPW bed narrowPeak peaks ENCSR100UQX ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAF9B-human ENCAB862MHS DNA False 2018-01-26 ENCODE 2 ENCFF550MIV, ENCFF712WXB 6970588 ENCODE Processing Pipeline 009ee57e4f5cde4119aa9407c7e070bf https://www.encodeproject.org/files/ENCFF493BPW/@@download/ENCFF493BPW.bed.gz GRCh38 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF371JEO bigBed narrowPeak peaks ENCSR100UQX ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAF9B-human ENCAB862MHS DNA False 2018-01-26 ENCODE 2 ENCFF493BPW 13191458 ENCODE Processing Pipeline 88f98b7df16556ba9444b6e9c0d43f79 https://www.encodeproject.org/files/ENCFF371JEO/@@download/ENCFF371JEO.bigBed GRCh38 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF000YWP bam alignments ENCSR000EHL ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 1 ENCFF000YXO 662094648 Michael Snyder, Stanford 32f6540534a99567d1e1f39b19563d43 https://www.encodeproject.org/files/ENCFF000YWP/@@download/ENCFF000YWP.bam hg19 archived inconsistent target of control experiment biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF000YWQ bigBed narrowPeak peaks ENCSR000EHL ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE ENCFF001VOH 339682 Michael Snyder, Stanford 1cf5b48444227aaf09278489915f0ce9 https://www.encodeproject.org/files/ENCFF000YWQ/@@download/ENCFF000YWQ.bigBed hg19 archived inconsistent target of control experiment biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF000YWR bam alignments ENCSR000EHL ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 2 ENCFF000YXN 719521652 Michael Snyder, Stanford b5ac38c666ec74ef91c8d1c8f14aff9f https://www.encodeproject.org/files/ENCFF000YWR/@@download/ENCFF000YWR.bam hg19 archived inconsistent target of control experiment biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF000YWS bigWig signal ENCSR000EHL ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 348117284 Michael Snyder, Stanford 827b59c5dfc3aaf3ad912b89060748e8 https://www.encodeproject.org/files/ENCFF000YWS/@@download/ENCFF000YWS.bigWig hg19 archived inconsistent target of control experiment biological replicates with identical biosample, missing derived_from insufficient read length, insufficient read depth ENCFF000YXN fastq reads ENCSR000EHL ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 2 1 28 single-ended 551576863 Michael Snyder, Stanford dc7255a29ff2a38a6d9bafd6c858d71e https://www.encodeproject.org/files/ENCFF000YXN/@@download/ENCFF000YXN.fastq.gz Illumina Genome Analyzer /files/ENCFF000YQC/ released inconsistent target of control experiment biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF000YXO fastq reads ENCSR000EHL ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 1 1 28 single-ended 505279803 Michael Snyder, Stanford cf1119371807c0eb9add16373a637d9f https://www.encodeproject.org/files/ENCFF000YXO/@@download/ENCFF000YXO.fastq.gz Illumina Genome Analyzer /files/ENCFF000YQB/ released inconsistent target of control experiment biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF001VOH bed narrowPeak peaks ENCSR000EHL ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 112755 Michael Snyder, Stanford e878710ad764502ef990eeff2524a04a https://www.encodeproject.org/files/ENCFF001VOH/@@download/ENCFF001VOH.bed.gz hg19 archived inconsistent target of control experiment biological replicates with identical biosample, missing derived_from insufficient read length, insufficient read depth ENCFF002CXQ bed narrowPeak optimal idr thresholded peaks ENCSR000EHL ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 201419 ENCODE Consortium Analysis Working Group 084ad0406460e0147c0920c7d6ee0855 https://www.encodeproject.org/files/ENCFF002CXQ/@@download/ENCFF002CXQ.bed.gz hg19 archived inconsistent target of control experiment biological replicates with identical biosample, missing derived_from insufficient read length, insufficient read depth ENCFF735GTI bigBed narrowPeak optimal idr thresholded peaks ENCSR000EHL ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE ENCFF002CXQ 503641 ENCODE Consortium aba365c40e782385ae6568ee5ba1fa22 https://www.encodeproject.org/files/ENCFF735GTI/@@download/ENCFF735GTI.bigBed hg19 archived inconsistent target of control experiment biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF496HBX bam unfiltered alignments ENCSR000EHL ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 2 28 ENCFF000YXN, ENCFF643CGH 721397409 ENCODE Processing Pipeline 95763edcb20e46f99b70183f66f30d6b https://www.encodeproject.org/files/ENCFF496HBX/@@download/ENCFF496HBX.bam GRCh38 released inconsistent target of control experiment biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF333ESU bam unfiltered alignments ENCSR000EHL ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 1 28 ENCFF000YXO, ENCFF643CGH 663863362 ENCODE Processing Pipeline 04d136ae631e076f3a415d0f3ae37030 https://www.encodeproject.org/files/ENCFF333ESU/@@download/ENCFF333ESU.bam GRCh38 released inconsistent target of control experiment biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF185VII bam alignments ENCSR000EHL ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 2 28 ENCFF000YXN, ENCFF643CGH 338082963 ENCODE Processing Pipeline 4a8a8381e0914e1eb1fe8db9199b6771 https://www.encodeproject.org/files/ENCFF185VII/@@download/ENCFF185VII.bam GRCh38 released inconsistent target of control experiment biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF658FLY bam alignments ENCSR000EHL ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 1 28 ENCFF000YXO, ENCFF643CGH 318926088 ENCODE Processing Pipeline 6fcd38f28253a3831d846959d5c4a055 https://www.encodeproject.org/files/ENCFF658FLY/@@download/ENCFF658FLY.bam GRCh38 released inconsistent target of control experiment biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF699LQL bam unfiltered alignments ENCSR000EHL ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 2 28 ENCFF000YXN, ENCFF807MUK 720252911 ENCODE Processing Pipeline d4c1dfa7d87ba3b6682576e8a9a70dfb https://www.encodeproject.org/files/ENCFF699LQL/@@download/ENCFF699LQL.bam hg19 released inconsistent target of control experiment biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF318TVO bam alignments ENCSR000EHL ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 2 28 ENCFF000YXN, ENCFF807MUK 338404825 ENCODE Processing Pipeline 2d669697d9a2cccdcba5cd1b27142660 https://www.encodeproject.org/files/ENCFF318TVO/@@download/ENCFF318TVO.bam hg19 released inconsistent target of control experiment biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF740JQR bam unfiltered alignments ENCSR000EHL ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 1 28 ENCFF000YXO, ENCFF807MUK 662771466 ENCODE Processing Pipeline 14b46ee1254032aa60a4ea64c47291bb https://www.encodeproject.org/files/ENCFF740JQR/@@download/ENCFF740JQR.bam hg19 released inconsistent target of control experiment biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF371LNT bam alignments ENCSR000EHL ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 1 28 ENCFF000YXO, ENCFF807MUK 319233695 ENCODE Processing Pipeline ae5ae9e30fb3b363871bff74ffada4dc https://www.encodeproject.org/files/ENCFF371LNT/@@download/ENCFF371LNT.bam hg19 released inconsistent target of control experiment biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF278KVO bed narrowPeak conservative idr thresholded peaks ENCSR000EHL ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF001TDO, ENCFF311JHD, ENCFF538LJI, ENCFF548UHR 219449 ENCODE Processing Pipeline 6bb8d993ac0e9c6b3d69894ae17164ee https://www.encodeproject.org/files/ENCFF278KVO/@@download/ENCFF278KVO.bed.gz hg19 released inconsistent target of control experiment biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF574JJT bigWig signal p-value ENCSR000EHL ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 2 ENCFF318TVO, ENCFF498SAC 280314086 ENCODE Processing Pipeline edfd5a8b266c02970457def56d2dfe20 https://www.encodeproject.org/files/ENCFF574JJT/@@download/ENCFF574JJT.bigWig hg19 released inconsistent target of control experiment biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF311JHD bed narrowPeak peaks ENCSR000EHL ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 1 ENCFF371LNT, ENCFF732TLR 5548569 ENCODE Processing Pipeline d5c14559ee0dae972ab69cce08e29c20 https://www.encodeproject.org/files/ENCFF311JHD/@@download/ENCFF311JHD.bed.gz hg19 released inconsistent target of control experiment biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF154DDO bigBed narrowPeak peaks ENCSR000EHL ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 1 ENCFF311JHD 12221994 ENCODE Processing Pipeline 253476a47c085272cb1c35bdaeb4f384 https://www.encodeproject.org/files/ENCFF154DDO/@@download/ENCFF154DDO.bigBed hg19 released inconsistent target of control experiment biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF535LSJ bigBed narrowPeak peaks ENCSR000EHL ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 2 ENCFF538LJI 12216522 ENCODE Processing Pipeline f9b43aa4b93ec6a0344426b8970a6185 https://www.encodeproject.org/files/ENCFF535LSJ/@@download/ENCFF535LSJ.bigBed hg19 released inconsistent target of control experiment biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF284SOH bigWig signal p-value ENCSR000EHL ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 1 ENCFF371LNT, ENCFF732TLR 231570918 ENCODE Processing Pipeline 55cfb4d38c4bb301d07ac6df586353ba https://www.encodeproject.org/files/ENCFF284SOH/@@download/ENCFF284SOH.bigWig hg19 released inconsistent target of control experiment biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF886MYL bigWig fold change over control ENCSR000EHL ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 2 ENCFF318TVO, ENCFF498SAC 153397333 ENCODE Processing Pipeline 814d8a46416e7bdb3ca24fdc54d37727 https://www.encodeproject.org/files/ENCFF886MYL/@@download/ENCFF886MYL.bigWig hg19 released inconsistent target of control experiment biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF243VEK bigBed narrowPeak conservative idr thresholded peaks ENCSR000EHL ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF278KVO 452347 ENCODE Processing Pipeline 9ca7287159aac941506e4849c07c6263 https://www.encodeproject.org/files/ENCFF243VEK/@@download/ENCFF243VEK.bigBed hg19 released inconsistent target of control experiment biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF052NEG bigWig fold change over control ENCSR000EHL ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 1 ENCFF371LNT, ENCFF732TLR 141679405 ENCODE Processing Pipeline b48a8a1e7c7c1fb9552a55941970b1f0 https://www.encodeproject.org/files/ENCFF052NEG/@@download/ENCFF052NEG.bigWig hg19 released inconsistent target of control experiment biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF552VTT bigWig fold change over control ENCSR000EHL ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF318TVO, ENCFF371LNT, ENCFF498SAC, ENCFF732TLR 331794022 ENCODE Processing Pipeline b5cd3fef20812b5fee606e2579b24409 https://www.encodeproject.org/files/ENCFF552VTT/@@download/ENCFF552VTT.bigWig hg19 released inconsistent target of control experiment biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF548UHR bed narrowPeak peaks ENCSR000EHL ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF318TVO, ENCFF371LNT, ENCFF498SAC, ENCFF732TLR 6615743 ENCODE Processing Pipeline 312d75470686acbed2573f95ac1a663b https://www.encodeproject.org/files/ENCFF548UHR/@@download/ENCFF548UHR.bed.gz hg19 released inconsistent target of control experiment biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF954FLD bigWig signal p-value ENCSR000EHL ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 2 ENCFF156NSV, ENCFF185VII 217803722 ENCODE Processing Pipeline c6fc12325858de1c3c609b76b1468b79 https://www.encodeproject.org/files/ENCFF954FLD/@@download/ENCFF954FLD.bigWig GRCh38 released inconsistent target of control experiment biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF603ASW bigWig signal p-value ENCSR000EHL ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF318TVO, ENCFF371LNT, ENCFF498SAC, ENCFF732TLR 359399845 ENCODE Processing Pipeline bd587ca3770b9d04acb55f8c694b80b2 https://www.encodeproject.org/files/ENCFF603ASW/@@download/ENCFF603ASW.bigWig hg19 released inconsistent target of control experiment biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF538LJI bed narrowPeak peaks ENCSR000EHL ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 2 ENCFF318TVO, ENCFF498SAC 5450249 ENCODE Processing Pipeline 644f9f0d26d1a0e6f7b8a2e09282df2b https://www.encodeproject.org/files/ENCFF538LJI/@@download/ENCFF538LJI.bed.gz hg19 released inconsistent target of control experiment biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF662XQF bigBed narrowPeak peaks ENCSR000EHL ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF548UHR 12358847 ENCODE Processing Pipeline 93bb5998c1e0c54e39b9ab9ca20a3f94 https://www.encodeproject.org/files/ENCFF662XQF/@@download/ENCFF662XQF.bigBed hg19 released inconsistent target of control experiment biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF394LOQ bed narrowPeak optimal idr thresholded peaks ENCSR000EHL ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF001TDO, ENCFF311JHD, ENCFF538LJI, ENCFF548UHR 233885 ENCODE Processing Pipeline f68323c451656aa98cda4989cef2e027 https://www.encodeproject.org/files/ENCFF394LOQ/@@download/ENCFF394LOQ.bed.gz hg19 released inconsistent target of control experiment biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF752QXU bigWig signal p-value ENCSR000EHL ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF156NSV, ENCFF185VII, ENCFF658FLY, ENCFF715JBE 466339697 ENCODE Processing Pipeline 2bce6d36e58cb29e07c08a5af1b90bb9 https://www.encodeproject.org/files/ENCFF752QXU/@@download/ENCFF752QXU.bigWig GRCh38 released inconsistent target of control experiment biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF425WGA bigWig signal p-value ENCSR000EHL ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 1 ENCFF658FLY, ENCFF715JBE 251820836 ENCODE Processing Pipeline d3082c9ee05d7950126d0ec757ccb9d3 https://www.encodeproject.org/files/ENCFF425WGA/@@download/ENCFF425WGA.bigWig GRCh38 released inconsistent target of control experiment biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF158ULP bed narrowPeak peaks ENCSR000EHL ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 1 ENCFF658FLY, ENCFF715JBE 5548237 ENCODE Processing Pipeline c2dd1f4462c5a42d1474921b073eb128 https://www.encodeproject.org/files/ENCFF158ULP/@@download/ENCFF158ULP.bed.gz GRCh38 released inconsistent target of control experiment biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF736OUD bigBed narrowPeak peaks ENCSR000EHL ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF869HCI 12367091 ENCODE Processing Pipeline e5eef12b6d4f9baea9ea48fb286ded6b https://www.encodeproject.org/files/ENCFF736OUD/@@download/ENCFF736OUD.bigBed GRCh38 released inconsistent target of control experiment biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF887PRI bigBed narrowPeak optimal idr thresholded peaks ENCSR000EHL ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF394LOQ 475900 ENCODE Processing Pipeline 7f3971da24ae30e0051ecb9de263cad6 https://www.encodeproject.org/files/ENCFF887PRI/@@download/ENCFF887PRI.bigBed hg19 released inconsistent target of control experiment biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF869HCI bed narrowPeak peaks ENCSR000EHL ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF156NSV, ENCFF185VII, ENCFF658FLY, ENCFF715JBE 6590662 ENCODE Processing Pipeline 567a35e6395de6404ecaec5825dde06a https://www.encodeproject.org/files/ENCFF869HCI/@@download/ENCFF869HCI.bed.gz GRCh38 released inconsistent target of control experiment biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF904ULT bigBed narrowPeak peaks ENCSR000EHL ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 2 ENCFF484AIQ 12185231 ENCODE Processing Pipeline 30ee6e49a66fe29ec97b9651f48f17d2 https://www.encodeproject.org/files/ENCFF904ULT/@@download/ENCFF904ULT.bigBed GRCh38 released inconsistent target of control experiment biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF883RUO bigWig fold change over control ENCSR000EHL ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 1 ENCFF658FLY, ENCFF715JBE 145676227 ENCODE Processing Pipeline df6f9a3aed160568ae72ef5f7253cf48 https://www.encodeproject.org/files/ENCFF883RUO/@@download/ENCFF883RUO.bigWig GRCh38 released inconsistent target of control experiment biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF585CJK bigWig fold change over control ENCSR000EHL ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 2 ENCFF156NSV, ENCFF185VII 154337356 ENCODE Processing Pipeline 64622df47e98a2b57a312531d71b9c20 https://www.encodeproject.org/files/ENCFF585CJK/@@download/ENCFF585CJK.bigWig GRCh38 released inconsistent target of control experiment biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF484AIQ bed narrowPeak peaks ENCSR000EHL ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 2 ENCFF156NSV, ENCFF185VII 5463371 ENCODE Processing Pipeline 3c84a4066ebcfbdc2e76db045c4eaabf https://www.encodeproject.org/files/ENCFF484AIQ/@@download/ENCFF484AIQ.bed.gz GRCh38 released inconsistent target of control experiment biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF597CEP bigWig fold change over control ENCSR000EHL ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF156NSV, ENCFF185VII, ENCFF658FLY, ENCFF715JBE 329171823 ENCODE Processing Pipeline c4cb81ec20a9dbcc93be3efe87d73e78 https://www.encodeproject.org/files/ENCFF597CEP/@@download/ENCFF597CEP.bigWig GRCh38 released inconsistent target of control experiment biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF203WMU bigBed narrowPeak peaks ENCSR000EHL ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 1 ENCFF158ULP 12213973 ENCODE Processing Pipeline c2f8958e6ccca6b0ed0a9e2562cd66ca https://www.encodeproject.org/files/ENCFF203WMU/@@download/ENCFF203WMU.bigBed GRCh38 released inconsistent target of control experiment biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF386RFD bigBed narrowPeak conservative idr thresholded peaks ENCSR000EHL ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF375FRM 449480 ENCODE Processing Pipeline 0a51b39b62bbd6366a640049faa3312f https://www.encodeproject.org/files/ENCFF386RFD/@@download/ENCFF386RFD.bigBed GRCh38 released inconsistent target of control experiment biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF741JES bed narrowPeak optimal idr thresholded peaks ENCSR000EHL ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF158ULP, ENCFF419RSJ, ENCFF484AIQ, ENCFF869HCI 244175 ENCODE Processing Pipeline b037ddb38486dcbd9735cb77b8861b19 https://www.encodeproject.org/files/ENCFF741JES/@@download/ENCFF741JES.bed.gz GRCh38 released inconsistent target of control experiment biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF179KNP bigBed narrowPeak optimal idr thresholded peaks ENCSR000EHL ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF741JES 489988 ENCODE Processing Pipeline 9a9cbccfcaa627b65caf20f3c89aac3e https://www.encodeproject.org/files/ENCFF179KNP/@@download/ENCFF179KNP.bigBed GRCh38 released inconsistent target of control experiment biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF375FRM bed narrowPeak conservative idr thresholded peaks ENCSR000EHL ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF158ULP, ENCFF419RSJ, ENCFF484AIQ, ENCFF869HCI 217025 ENCODE Processing Pipeline f7e759933cd01838ed2702a7358ebc4d https://www.encodeproject.org/files/ENCFF375FRM/@@download/ENCFF375FRM.bed.gz GRCh38 released inconsistent target of control experiment biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF000YNB bam alignments ENCSR000EFT ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATA1-human ENCAB000AGV DNA see document see document False 2012-08-20 ENCODE 1 1 466807479 Michael Snyder, Stanford b4a8dca83b1b79f679ff310bc5758d18 https://www.encodeproject.org/files/ENCFF000YNB/@@download/ENCFF000YNB.bam hg19 archived borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, inconsistent target of control experiment biological replicates with identical biosample, missing derived_from ENCFF000YNC bigBed narrowPeak peaks ENCSR000EFT ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATA1-human ENCAB000AGV DNA see document see document False 2012-08-20 ENCODE ENCFF001VND 412931 Michael Snyder, Stanford 58500fbfd7c69dc68b5ccc911eaf3679 https://www.encodeproject.org/files/ENCFF000YNC/@@download/ENCFF000YNC.bigBed hg19 archived borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, inconsistent target of control experiment biological replicates with identical biosample ENCFF000YND fastq reads ENCSR000EFT ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATA1-human ENCAB000AGV DNA see document see document False 2012-08-20 ENCODE 1 1 36 single-ended 941263232 Michael Snyder, Stanford c0d7e3db1588727380de1beded581450 https://www.encodeproject.org/files/ENCFF000YND/@@download/ENCFF000YND.fastq.gz Illumina Genome Analyzer /files/ENCFF000YQB/ released borderline replicate concordance, low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, inconsistent control read length, low read length biological replicates with identical biosample ENCFF000YNF fastq reads ENCSR000EFT ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATA1-human ENCAB000AGV DNA see document see document False 2012-08-20 ENCODE 2 1 36 single-ended 914720436 Michael Snyder, Stanford d9d9e1662931f1637328138f71b6095d https://www.encodeproject.org/files/ENCFF000YNF/@@download/ENCFF000YNF.fastq.gz Illumina Genome Analyzer /files/ENCFF000YQC/ released borderline replicate concordance, low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, inconsistent control read length, low read length biological replicates with identical biosample ENCFF000YNG bam alignments ENCSR000EFT ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATA1-human ENCAB000AGV DNA see document see document False 2012-08-20 ENCODE 2 1 495204944 Michael Snyder, Stanford d045385516dc62e977d9e13bd2225d5c https://www.encodeproject.org/files/ENCFF000YNG/@@download/ENCFF000YNG.bam hg19 archived borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, inconsistent target of control experiment biological replicates with identical biosample, missing derived_from ENCFF000YNI bigWig signal ENCSR000EFT ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATA1-human ENCAB000AGV DNA see document see document False 2012-08-20 ENCODE 474078986 Michael Snyder, Stanford cf5fc0e6f09e28e3be9ee130522d7d04 https://www.encodeproject.org/files/ENCFF000YNI/@@download/ENCFF000YNI.bigWig hg19 archived borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, inconsistent target of control experiment biological replicates with identical biosample, missing derived_from ENCFF001VND bed narrowPeak peaks ENCSR000EFT ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATA1-human ENCAB000AGV DNA see document see document False 2012-08-20 ENCODE 173891 Michael Snyder, Stanford 6a07da1b0c8bc539abe32ca5078768e6 https://www.encodeproject.org/files/ENCFF001VND/@@download/ENCFF001VND.bed.gz hg19 archived borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, inconsistent target of control experiment biological replicates with identical biosample, missing derived_from ENCFF392GZX bam alignments ENCSR000EFT ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATA1-human ENCAB000AGV DNA see document see document False 2012-08-20 ENCODE 1 28 ENCFF000YND, ENCFF643CGH 503955067 ENCODE Processing Pipeline 6175db3d2b797f9613fe5d7d997013fb https://www.encodeproject.org/files/ENCFF392GZX/@@download/ENCFF392GZX.bam GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, inconsistent target of control experiment biological replicates with identical biosample ENCFF355PTV bam unfiltered alignments ENCSR000EFT ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATA1-human ENCAB000AGV DNA see document see document False 2012-08-20 ENCODE 1 28 ENCFF000YND, ENCFF643CGH 916897813 ENCODE Processing Pipeline 7a10d5b15008a7e752890c3eb529f9b7 https://www.encodeproject.org/files/ENCFF355PTV/@@download/ENCFF355PTV.bam GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, inconsistent target of control experiment biological replicates with identical biosample ENCFF485XKZ bam unfiltered alignments ENCSR000EFT ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATA1-human ENCAB000AGV DNA see document see document False 2012-08-20 ENCODE 2 28 ENCFF000YNF, ENCFF643CGH 908729308 ENCODE Processing Pipeline deedbc23b9fd82169d615d17b8029719 https://www.encodeproject.org/files/ENCFF485XKZ/@@download/ENCFF485XKZ.bam GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, inconsistent target of control experiment biological replicates with identical biosample ENCFF431ZVW bam alignments ENCSR000EFT ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATA1-human ENCAB000AGV DNA see document see document False 2012-08-20 ENCODE 2 28 ENCFF000YNF, ENCFF643CGH 520200983 ENCODE Processing Pipeline d6af1c4f47c11d7d3315049e9cc33cd9 https://www.encodeproject.org/files/ENCFF431ZVW/@@download/ENCFF431ZVW.bam GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, inconsistent target of control experiment biological replicates with identical biosample ENCFF888FKV bam unfiltered alignments ENCSR000EFT ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATA1-human ENCAB000AGV DNA see document see document False 2012-08-20 ENCODE 2 28 ENCFF000YNF, ENCFF807MUK 905444449 ENCODE Processing Pipeline e935c7fe72ba22dd5d62ca9f4d2a516b https://www.encodeproject.org/files/ENCFF888FKV/@@download/ENCFF888FKV.bam hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, inconsistent target of control experiment biological replicates with identical biosample ENCFF564QLO bam unfiltered alignments ENCSR000EFT ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATA1-human ENCAB000AGV DNA see document see document False 2012-08-20 ENCODE 1 28 ENCFF000YND, ENCFF807MUK 913767163 ENCODE Processing Pipeline acd3e03814f8c2c9e526323651444411 https://www.encodeproject.org/files/ENCFF564QLO/@@download/ENCFF564QLO.bam hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, inconsistent target of control experiment biological replicates with identical biosample ENCFF573VVJ bam alignments ENCSR000EFT ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATA1-human ENCAB000AGV DNA see document see document False 2012-08-20 ENCODE 2 28 ENCFF000YNF, ENCFF807MUK 520882474 ENCODE Processing Pipeline 6a2e4da0cda14b18462a78f06e1c55fc https://www.encodeproject.org/files/ENCFF573VVJ/@@download/ENCFF573VVJ.bam hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, inconsistent target of control experiment biological replicates with identical biosample ENCFF942NUX bam alignments ENCSR000EFT ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATA1-human ENCAB000AGV DNA see document see document False 2012-08-20 ENCODE 1 28 ENCFF000YND, ENCFF807MUK 504562752 ENCODE Processing Pipeline 9473f4a949dcea619d705b5c587fc993 https://www.encodeproject.org/files/ENCFF942NUX/@@download/ENCFF942NUX.bam hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, inconsistent target of control experiment biological replicates with identical biosample ENCFF568NXU bigWig signal p-value ENCSR000EFT ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATA1-human ENCAB000AGV DNA see document see document False 2012-08-20 ENCODE 1 ENCFF498SAC, ENCFF732TLR, ENCFF942NUX 411641296 ENCODE Processing Pipeline f55904d83388f43705feb7f27d92fefc https://www.encodeproject.org/files/ENCFF568NXU/@@download/ENCFF568NXU.bigWig hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, inconsistent target of control experiment biological replicates with identical biosample ENCFF573YKX bigWig signal p-value ENCSR000EFT ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATA1-human ENCAB000AGV DNA see document see document False 2012-08-20 ENCODE 2 ENCFF498SAC, ENCFF573VVJ 284717524 ENCODE Processing Pipeline a148348581e97612005c5ccb075495a5 https://www.encodeproject.org/files/ENCFF573YKX/@@download/ENCFF573YKX.bigWig hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, inconsistent target of control experiment biological replicates with identical biosample ENCFF869KHC bigBed narrowPeak peaks ENCSR000EFT ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATA1-human ENCAB000AGV DNA see document see document False 2012-08-20 ENCODE 1 ENCFF253DCO 10675128 ENCODE Processing Pipeline fb2fa49fc56081444ca8e6ee77e0ab07 https://www.encodeproject.org/files/ENCFF869KHC/@@download/ENCFF869KHC.bigBed hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, inconsistent target of control experiment biological replicates with identical biosample ENCFF178NBS bed narrowPeak conservative idr thresholded peaks ENCSR000EFT ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATA1-human ENCAB000AGV DNA see document see document False 2012-08-20 ENCODE 1, 2 ENCFF001TDO, ENCFF234GQW, ENCFF253DCO, ENCFF916MQB 197081 ENCODE Processing Pipeline 1f762100579857098da1809bf575b8c2 https://www.encodeproject.org/files/ENCFF178NBS/@@download/ENCFF178NBS.bed.gz hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, inconsistent target of control experiment biological replicates with identical biosample ENCFF253DCO bed narrowPeak peaks ENCSR000EFT ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATA1-human ENCAB000AGV DNA see document see document False 2012-08-20 ENCODE 1 ENCFF498SAC, ENCFF732TLR, ENCFF942NUX 4597558 ENCODE Processing Pipeline 83ffe6ced3b82d7ee59333110e1fea74 https://www.encodeproject.org/files/ENCFF253DCO/@@download/ENCFF253DCO.bed.gz hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, inconsistent target of control experiment biological replicates with identical biosample ENCFF870VVO bigBed narrowPeak optimal idr thresholded peaks ENCSR000EFT ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATA1-human ENCAB000AGV DNA see document see document False 2012-08-20 ENCODE 1, 2 ENCFF632NQI 520532 ENCODE Processing Pipeline 3b7082e2965703f137ffd4ad8e707582 https://www.encodeproject.org/files/ENCFF870VVO/@@download/ENCFF870VVO.bigBed hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, inconsistent target of control experiment biological replicates with identical biosample ENCFF724KSO bigWig signal p-value ENCSR000EFT ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATA1-human ENCAB000AGV DNA see document see document False 2012-08-20 ENCODE 1, 2 ENCFF498SAC, ENCFF573VVJ, ENCFF732TLR, ENCFF942NUX 527016046 ENCODE Processing Pipeline deb12691681657f63627a2c2b0998a6a https://www.encodeproject.org/files/ENCFF724KSO/@@download/ENCFF724KSO.bigWig hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, inconsistent target of control experiment biological replicates with identical biosample ENCFF234GQW bed narrowPeak peaks ENCSR000EFT ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATA1-human ENCAB000AGV DNA see document see document False 2012-08-20 ENCODE 1, 2 ENCFF498SAC, ENCFF573VVJ, ENCFF732TLR, ENCFF942NUX 5191930 ENCODE Processing Pipeline 749e2381ff9f6dd286141019b1b16ebb https://www.encodeproject.org/files/ENCFF234GQW/@@download/ENCFF234GQW.bed.gz hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, inconsistent target of control experiment biological replicates with identical biosample ENCFF097EXZ bigBed narrowPeak conservative idr thresholded peaks ENCSR000EFT ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATA1-human ENCAB000AGV DNA see document see document False 2012-08-20 ENCODE 1, 2 ENCFF178NBS 425959 ENCODE Processing Pipeline 3497bb786d61d0c6bdcb0ca866c9eff7 https://www.encodeproject.org/files/ENCFF097EXZ/@@download/ENCFF097EXZ.bigBed hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, inconsistent target of control experiment biological replicates with identical biosample ENCFF665QNP bigWig fold change over control ENCSR000EFT ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATA1-human ENCAB000AGV DNA see document see document False 2012-08-20 ENCODE 1 ENCFF498SAC, ENCFF732TLR, ENCFF942NUX 330147149 ENCODE Processing Pipeline fce56e51d1a3b7ce62717fd89d8dc88a https://www.encodeproject.org/files/ENCFF665QNP/@@download/ENCFF665QNP.bigWig hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, inconsistent target of control experiment biological replicates with identical biosample ENCFF352AUQ bigWig fold change over control ENCSR000EFT ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATA1-human ENCAB000AGV DNA see document see document False 2012-08-20 ENCODE 2 ENCFF498SAC, ENCFF573VVJ 260484047 ENCODE Processing Pipeline 94f98de889fc3ac40bbe0d37e1e8ca45 https://www.encodeproject.org/files/ENCFF352AUQ/@@download/ENCFF352AUQ.bigWig hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, inconsistent target of control experiment biological replicates with identical biosample ENCFF833CBY bigWig fold change over control ENCSR000EFT ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATA1-human ENCAB000AGV DNA see document see document False 2012-08-20 ENCODE 1, 2 ENCFF498SAC, ENCFF573VVJ, ENCFF732TLR, ENCFF942NUX 544988785 ENCODE Processing Pipeline 1eb2e73f2ac1dfc43c8debd4b264823a https://www.encodeproject.org/files/ENCFF833CBY/@@download/ENCFF833CBY.bigWig hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, inconsistent target of control experiment biological replicates with identical biosample ENCFF916MQB bed narrowPeak peaks ENCSR000EFT ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATA1-human ENCAB000AGV DNA see document see document False 2012-08-20 ENCODE 2 ENCFF498SAC, ENCFF573VVJ 4069521 ENCODE Processing Pipeline 8b4ab6409aa75db4f808f00cfeb1980f https://www.encodeproject.org/files/ENCFF916MQB/@@download/ENCFF916MQB.bed.gz hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, inconsistent target of control experiment biological replicates with identical biosample ENCFF311YRS bigBed narrowPeak peaks ENCSR000EFT ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATA1-human ENCAB000AGV DNA see document see document False 2012-08-20 ENCODE 2 ENCFF916MQB 10183322 ENCODE Processing Pipeline 9ead2f203f8fba3a5934a48ca43b6456 https://www.encodeproject.org/files/ENCFF311YRS/@@download/ENCFF311YRS.bigBed hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, inconsistent target of control experiment biological replicates with identical biosample ENCFF308SHR bigBed narrowPeak peaks ENCSR000EFT ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATA1-human ENCAB000AGV DNA see document see document False 2012-08-20 ENCODE 1, 2 ENCFF234GQW 11176063 ENCODE Processing Pipeline bdf67ab20803445a46d2750a4b0c0abd https://www.encodeproject.org/files/ENCFF308SHR/@@download/ENCFF308SHR.bigBed hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, inconsistent target of control experiment biological replicates with identical biosample ENCFF632NQI bed narrowPeak optimal idr thresholded peaks ENCSR000EFT ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATA1-human ENCAB000AGV DNA see document see document False 2012-08-20 ENCODE 1, 2 ENCFF001TDO, ENCFF234GQW, ENCFF253DCO, ENCFF916MQB 261856 ENCODE Processing Pipeline e0454bcca2f35d6ec9a1ad5aca4d6ebc https://www.encodeproject.org/files/ENCFF632NQI/@@download/ENCFF632NQI.bed.gz hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, inconsistent target of control experiment biological replicates with identical biosample ENCFF833DKE bigWig fold change over control ENCSR000EFT ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATA1-human ENCAB000AGV DNA see document see document False 2012-08-20 ENCODE 2 ENCFF156NSV, ENCFF431ZVW 265347665 ENCODE Processing Pipeline 8320b57a9905d7b3cdd1e59e8ddffeec https://www.encodeproject.org/files/ENCFF833DKE/@@download/ENCFF833DKE.bigWig GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, inconsistent target of control experiment biological replicates with identical biosample ENCFF962ECN bigBed narrowPeak peaks ENCSR000EFT ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATA1-human ENCAB000AGV DNA see document see document False 2012-08-20 ENCODE 1 ENCFF224MWN 10647904 ENCODE Processing Pipeline aaf41963fdc2b57270e97292406d9684 https://www.encodeproject.org/files/ENCFF962ECN/@@download/ENCFF962ECN.bigBed GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, inconsistent target of control experiment biological replicates with identical biosample ENCFF411DBA bigBed narrowPeak conservative idr thresholded peaks ENCSR000EFT ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATA1-human ENCAB000AGV DNA see document see document False 2012-08-20 ENCODE 1, 2 ENCFF875JHB 435293 ENCODE Processing Pipeline 4fd1ccd71e82c70cd86036f179736b97 https://www.encodeproject.org/files/ENCFF411DBA/@@download/ENCFF411DBA.bigBed GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, inconsistent target of control experiment biological replicates with identical biosample ENCFF932GTA bigWig fold change over control ENCSR000EFT ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATA1-human ENCAB000AGV DNA see document see document False 2012-08-20 ENCODE 1, 2 ENCFF156NSV, ENCFF392GZX, ENCFF431ZVW, ENCFF715JBE 559800856 ENCODE Processing Pipeline 9d6b84ac0e1bc15d593555e44a6aa7e0 https://www.encodeproject.org/files/ENCFF932GTA/@@download/ENCFF932GTA.bigWig GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, inconsistent target of control experiment biological replicates with identical biosample ENCFF224MWN bed narrowPeak peaks ENCSR000EFT ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATA1-human ENCAB000AGV DNA see document see document False 2012-08-20 ENCODE 1 ENCFF156NSV, ENCFF392GZX, ENCFF715JBE 4573406 ENCODE Processing Pipeline 37ac862124138efa0ae4cdca773c331c https://www.encodeproject.org/files/ENCFF224MWN/@@download/ENCFF224MWN.bed.gz GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, inconsistent target of control experiment biological replicates with identical biosample ENCFF939ODZ bigBed narrowPeak optimal idr thresholded peaks ENCSR000EFT ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATA1-human ENCAB000AGV DNA see document see document False 2012-08-20 ENCODE 1, 2 ENCFF148JKK 524186 ENCODE Processing Pipeline 738f24c527dc10d9f8dc2a1b2b666b57 https://www.encodeproject.org/files/ENCFF939ODZ/@@download/ENCFF939ODZ.bigBed GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, inconsistent target of control experiment biological replicates with identical biosample ENCFF611TNZ bigWig signal p-value ENCSR000EFT ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATA1-human ENCAB000AGV DNA see document see document False 2012-08-20 ENCODE 1 ENCFF156NSV, ENCFF392GZX, ENCFF715JBE 447826183 ENCODE Processing Pipeline 2553002480e69d527e706861dab6f18b https://www.encodeproject.org/files/ENCFF611TNZ/@@download/ENCFF611TNZ.bigWig GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, inconsistent target of control experiment biological replicates with identical biosample ENCFF735YRM bed narrowPeak peaks ENCSR000EFT ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATA1-human ENCAB000AGV DNA see document see document False 2012-08-20 ENCODE 2 ENCFF156NSV, ENCFF431ZVW 4041075 ENCODE Processing Pipeline b3a7db6e52d108d876514950a5263549 https://www.encodeproject.org/files/ENCFF735YRM/@@download/ENCFF735YRM.bed.gz GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, inconsistent target of control experiment biological replicates with identical biosample ENCFF045KYK bed narrowPeak peaks ENCSR000EFT ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATA1-human ENCAB000AGV DNA see document see document False 2012-08-20 ENCODE 1, 2 ENCFF156NSV, ENCFF392GZX, ENCFF431ZVW, ENCFF715JBE 5196828 ENCODE Processing Pipeline be6bb7ddf8a0b80d0dfe7940076b259f https://www.encodeproject.org/files/ENCFF045KYK/@@download/ENCFF045KYK.bed.gz GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, inconsistent target of control experiment biological replicates with identical biosample ENCFF375QMM bigBed narrowPeak peaks ENCSR000EFT ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATA1-human ENCAB000AGV DNA see document see document False 2012-08-20 ENCODE 2 ENCFF735YRM 10127797 ENCODE Processing Pipeline 7cca08970d3de979061d6f614e499118 https://www.encodeproject.org/files/ENCFF375QMM/@@download/ENCFF375QMM.bigBed GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, inconsistent target of control experiment biological replicates with identical biosample ENCFF148JKK bed narrowPeak optimal idr thresholded peaks ENCSR000EFT ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATA1-human ENCAB000AGV DNA see document see document False 2012-08-20 ENCODE 1, 2 ENCFF045KYK, ENCFF224MWN, ENCFF419RSJ, ENCFF735YRM 262784 ENCODE Processing Pipeline d5183b4c65853c9dea2b299fd17f2562 https://www.encodeproject.org/files/ENCFF148JKK/@@download/ENCFF148JKK.bed.gz GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, inconsistent target of control experiment biological replicates with identical biosample ENCFF394LAC bigWig signal p-value ENCSR000EFT ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATA1-human ENCAB000AGV DNA see document see document False 2012-08-20 ENCODE 2 ENCFF156NSV, ENCFF431ZVW 285459957 ENCODE Processing Pipeline 78a81f1dd8ac70389a227a1d92936fe7 https://www.encodeproject.org/files/ENCFF394LAC/@@download/ENCFF394LAC.bigWig GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, inconsistent target of control experiment biological replicates with identical biosample ENCFF826QID bigWig signal p-value ENCSR000EFT ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATA1-human ENCAB000AGV DNA see document see document False 2012-08-20 ENCODE 1, 2 ENCFF156NSV, ENCFF392GZX, ENCFF431ZVW, ENCFF715JBE 557094998 ENCODE Processing Pipeline a291366073938b9b8d5779988ed05ce3 https://www.encodeproject.org/files/ENCFF826QID/@@download/ENCFF826QID.bigWig GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, inconsistent target of control experiment biological replicates with identical biosample ENCFF875JHB bed narrowPeak conservative idr thresholded peaks ENCSR000EFT ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATA1-human ENCAB000AGV DNA see document see document False 2012-08-20 ENCODE 1, 2 ENCFF045KYK, ENCFF224MWN, ENCFF419RSJ, ENCFF735YRM 197526 ENCODE Processing Pipeline 8e03c2d46eded620a080b6b726df9c6e https://www.encodeproject.org/files/ENCFF875JHB/@@download/ENCFF875JHB.bed.gz GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, inconsistent target of control experiment biological replicates with identical biosample ENCFF974BQE bigWig fold change over control ENCSR000EFT ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATA1-human ENCAB000AGV DNA see document see document False 2012-08-20 ENCODE 1 ENCFF156NSV, ENCFF392GZX, ENCFF715JBE 329466668 ENCODE Processing Pipeline fb3e0364b9722781bf351a145cda8e1f https://www.encodeproject.org/files/ENCFF974BQE/@@download/ENCFF974BQE.bigWig GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, inconsistent target of control experiment biological replicates with identical biosample ENCFF780NTF bigBed narrowPeak peaks ENCSR000EFT ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATA1-human ENCAB000AGV DNA see document see document False 2012-08-20 ENCODE 1, 2 ENCFF045KYK 11225485 ENCODE Processing Pipeline 3a987356259ec481e2e4ac83e4c5b956 https://www.encodeproject.org/files/ENCFF780NTF/@@download/ENCFF780NTF.bigBed GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, inconsistent target of control experiment biological replicates with identical biosample ENCFF355VVD fastq reads ENCSR283ZRI ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2G-human ENCAB392AZR DNA SDS formaldehyde False 2017-12-01 ENCODE 1 1 40 single-ended 835219484 Xiang-Dong Fu, UCSD dbe054ef93d7640a21d0a1dd5aa45e59 https://www.encodeproject.org/files/ENCFF355VVD/@@download/ENCFF355VVD.fastq.gz Illumina HiSeq 2500 /files/ENCFF510UAH/ released low read depth, mild to moderate bottlenecking, antibody characterized with exemption, low read length, moderate library complexity experiment not submitted to GEO ENCFF356RYY fastq reads ENCSR283ZRI ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2G-human ENCAB392AZR DNA SDS formaldehyde False 2017-12-01 ENCODE 2 1 40 single-ended 768696915 Xiang-Dong Fu, UCSD e8bed452201b08fcdcb150b991b605eb https://www.encodeproject.org/files/ENCFF356RYY/@@download/ENCFF356RYY.fastq.gz Illumina HiSeq 2500 /files/ENCFF092DDZ/ released low read depth, mild to moderate bottlenecking, antibody characterized with exemption, low read length, moderate library complexity experiment not submitted to GEO ENCFF720NRD bam alignments ENCSR283ZRI ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2G-human ENCAB392AZR DNA SDS formaldehyde False 2017-12-01 ENCODE 1 40 ENCFF355VVD, ENCFF807MUK 406036861 ENCODE Processing Pipeline 8cbf7a399af737664ead695b2dfda74a https://www.encodeproject.org/files/ENCFF720NRD/@@download/ENCFF720NRD.bam hg19 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption, low read length, moderate library complexity experiment not submitted to GEO ENCFF589PPB bam unfiltered alignments ENCSR283ZRI ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2G-human ENCAB392AZR DNA SDS formaldehyde False 2017-12-01 ENCODE 2 40 ENCFF356RYY, ENCFF643CGH 824383183 ENCODE Processing Pipeline 2be8f5140deaabdce2d11f850563b4f1 https://www.encodeproject.org/files/ENCFF589PPB/@@download/ENCFF589PPB.bam GRCh38 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption, low read length, moderate library complexity experiment not submitted to GEO ENCFF635IJT bam alignments ENCSR283ZRI ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2G-human ENCAB392AZR DNA SDS formaldehyde False 2017-12-01 ENCODE 2 40 ENCFF356RYY, ENCFF643CGH 373074765 ENCODE Processing Pipeline f14e66b64817219c6d3943de662030c7 https://www.encodeproject.org/files/ENCFF635IJT/@@download/ENCFF635IJT.bam GRCh38 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption, low read length, moderate library complexity experiment not submitted to GEO ENCFF633IKF bam unfiltered alignments ENCSR283ZRI ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2G-human ENCAB392AZR DNA SDS formaldehyde False 2017-12-01 ENCODE 1 40 ENCFF355VVD, ENCFF807MUK 888910794 ENCODE Processing Pipeline 4d78dc5549b61a41fce7e82d268e1073 https://www.encodeproject.org/files/ENCFF633IKF/@@download/ENCFF633IKF.bam hg19 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption, low read length, moderate library complexity experiment not submitted to GEO ENCFF248FID bam unfiltered alignments ENCSR283ZRI ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2G-human ENCAB392AZR DNA SDS formaldehyde False 2017-12-01 ENCODE 2 40 ENCFF356RYY, ENCFF807MUK 824106980 ENCODE Processing Pipeline c157e8339327b946ae0157e0dd4bdbe5 https://www.encodeproject.org/files/ENCFF248FID/@@download/ENCFF248FID.bam hg19 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption, low read length, moderate library complexity experiment not submitted to GEO ENCFF958KLM bam alignments ENCSR283ZRI ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2G-human ENCAB392AZR DNA SDS formaldehyde False 2017-12-01 ENCODE 2 40 ENCFF356RYY, ENCFF807MUK 373777524 ENCODE Processing Pipeline fdb33ce0c1a240c009150516caf595c8 https://www.encodeproject.org/files/ENCFF958KLM/@@download/ENCFF958KLM.bam hg19 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption, low read length, moderate library complexity experiment not submitted to GEO ENCFF334OXO bam unfiltered alignments ENCSR283ZRI ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2G-human ENCAB392AZR DNA SDS formaldehyde False 2017-12-01 ENCODE 1 40 ENCFF355VVD, ENCFF643CGH 889103562 ENCODE Processing Pipeline cb0e0b4f9d9ff948ddd09d2b800b5976 https://www.encodeproject.org/files/ENCFF334OXO/@@download/ENCFF334OXO.bam GRCh38 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption, low read length, moderate library complexity experiment not submitted to GEO ENCFF121RZC bam alignments ENCSR283ZRI ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2G-human ENCAB392AZR DNA SDS formaldehyde False 2017-12-01 ENCODE 1 40 ENCFF355VVD, ENCFF643CGH 405226122 ENCODE Processing Pipeline 75a23455307c858ff3dbcbec82b13efe https://www.encodeproject.org/files/ENCFF121RZC/@@download/ENCFF121RZC.bam GRCh38 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption, low read length, moderate library complexity experiment not submitted to GEO ENCFF363HBF bigWig signal p-value ENCSR283ZRI ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2G-human ENCAB392AZR DNA SDS formaldehyde False 2017-12-01 ENCODE 2 ENCFF572OMD, ENCFF958KLM 423795378 ENCODE Processing Pipeline f2177bea68de3d77e5915d2c12243df8 https://www.encodeproject.org/files/ENCFF363HBF/@@download/ENCFF363HBF.bigWig hg19 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption, low read length, moderate library complexity experiment not submitted to GEO ENCFF085WDR bigWig signal p-value ENCSR283ZRI ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2G-human ENCAB392AZR DNA SDS formaldehyde False 2017-12-01 ENCODE 1, 2 ENCFF508DBG, ENCFF572OMD, ENCFF720NRD, ENCFF958KLM 749620273 ENCODE Processing Pipeline 4c903ecb962bf5bdd1e2f6c40f6f03bd https://www.encodeproject.org/files/ENCFF085WDR/@@download/ENCFF085WDR.bigWig hg19 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption, low read length, moderate library complexity experiment not submitted to GEO ENCFF273EYJ bed narrowPeak optimal idr thresholded peaks ENCSR283ZRI ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2G-human ENCAB392AZR DNA SDS formaldehyde False 2017-12-01 ENCODE 1, 2 ENCFF001TDO, ENCFF102MCA, ENCFF663NYD, ENCFF791LFD 1024718 ENCODE Processing Pipeline facef1e10b493fe42f62e65a2683f47b https://www.encodeproject.org/files/ENCFF273EYJ/@@download/ENCFF273EYJ.bed.gz hg19 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption, low read length, moderate library complexity experiment not submitted to GEO ENCFF540CYY bigWig fold change over control ENCSR283ZRI ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2G-human ENCAB392AZR DNA SDS formaldehyde False 2017-12-01 ENCODE 1, 2 ENCFF508DBG, ENCFF572OMD, ENCFF720NRD, ENCFF958KLM 435101891 ENCODE Processing Pipeline dc3c5eeef04acdacd0cc9846b3397ccf https://www.encodeproject.org/files/ENCFF540CYY/@@download/ENCFF540CYY.bigWig hg19 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption, low read length, moderate library complexity experiment not submitted to GEO ENCFF693PVI bigBed narrowPeak conservative idr thresholded peaks ENCSR283ZRI ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2G-human ENCAB392AZR DNA SDS formaldehyde False 2017-12-01 ENCODE 1, 2 ENCFF852IKH 2029196 ENCODE Processing Pipeline 15c65e054030e669805fa622ce143cb3 https://www.encodeproject.org/files/ENCFF693PVI/@@download/ENCFF693PVI.bigBed hg19 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption, low read length, moderate library complexity experiment not submitted to GEO ENCFF665FQH bigWig fold change over control ENCSR283ZRI ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2G-human ENCAB392AZR DNA SDS formaldehyde False 2017-12-01 ENCODE 2 ENCFF572OMD, ENCFF958KLM 195784257 ENCODE Processing Pipeline 36e8e7aedef7b881e4dc004fc22a40c2 https://www.encodeproject.org/files/ENCFF665FQH/@@download/ENCFF665FQH.bigWig hg19 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption, low read length, moderate library complexity experiment not submitted to GEO ENCFF791LFD bed narrowPeak peaks ENCSR283ZRI ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2G-human ENCAB392AZR DNA SDS formaldehyde False 2017-12-01 ENCODE 2 ENCFF572OMD, ENCFF958KLM 6185676 ENCODE Processing Pipeline fb1c60fc8fddc0244414dfb53e2e77ef https://www.encodeproject.org/files/ENCFF791LFD/@@download/ENCFF791LFD.bed.gz hg19 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption, low read length, moderate library complexity experiment not submitted to GEO ENCFF663NYD bed narrowPeak peaks ENCSR283ZRI ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2G-human ENCAB392AZR DNA SDS formaldehyde False 2017-12-01 ENCODE 1, 2 ENCFF508DBG, ENCFF572OMD, ENCFF720NRD, ENCFF958KLM 6769768 ENCODE Processing Pipeline e536533c39ff3d873d8e3ded031f057d https://www.encodeproject.org/files/ENCFF663NYD/@@download/ENCFF663NYD.bed.gz hg19 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption, low read length, moderate library complexity experiment not submitted to GEO ENCFF236RMG bigBed narrowPeak peaks ENCSR283ZRI ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2G-human ENCAB392AZR DNA SDS formaldehyde False 2017-12-01 ENCODE 1, 2 ENCFF663NYD 11036905 ENCODE Processing Pipeline 353337a93386d2e373e4d9faa2cde6b8 https://www.encodeproject.org/files/ENCFF236RMG/@@download/ENCFF236RMG.bigBed hg19 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption, low read length, moderate library complexity experiment not submitted to GEO ENCFF782XCM bigWig signal p-value ENCSR283ZRI ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2G-human ENCAB392AZR DNA SDS formaldehyde False 2017-12-01 ENCODE 1 ENCFF508DBG, ENCFF720NRD 533530645 ENCODE Processing Pipeline 69aff1991393ce7a88222efc916ecd28 https://www.encodeproject.org/files/ENCFF782XCM/@@download/ENCFF782XCM.bigWig hg19 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption, low read length, moderate library complexity experiment not submitted to GEO ENCFF102MCA bed narrowPeak peaks ENCSR283ZRI ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2G-human ENCAB392AZR DNA SDS formaldehyde False 2017-12-01 ENCODE 1 ENCFF508DBG, ENCFF720NRD 6204011 ENCODE Processing Pipeline c40bd1cdd9037b825572839798363719 https://www.encodeproject.org/files/ENCFF102MCA/@@download/ENCFF102MCA.bed.gz hg19 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption, low read length, moderate library complexity experiment not submitted to GEO ENCFF433VMF bigBed narrowPeak peaks ENCSR283ZRI ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2G-human ENCAB392AZR DNA SDS formaldehyde False 2017-12-01 ENCODE 2 ENCFF791LFD 11067862 ENCODE Processing Pipeline 022d51fc7562a3344011efff526490bb https://www.encodeproject.org/files/ENCFF433VMF/@@download/ENCFF433VMF.bigBed hg19 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption, low read length, moderate library complexity experiment not submitted to GEO ENCFF574LQA bigBed narrowPeak peaks ENCSR283ZRI ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2G-human ENCAB392AZR DNA SDS formaldehyde False 2017-12-01 ENCODE 1 ENCFF102MCA 11015289 ENCODE Processing Pipeline 43f747ac4cded02b9a30433624311c1c https://www.encodeproject.org/files/ENCFF574LQA/@@download/ENCFF574LQA.bigBed hg19 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption, low read length, moderate library complexity experiment not submitted to GEO ENCFF082TXS bigBed narrowPeak optimal idr thresholded peaks ENCSR283ZRI ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2G-human ENCAB392AZR DNA SDS formaldehyde False 2017-12-01 ENCODE 1, 2 ENCFF273EYJ 2084939 ENCODE Processing Pipeline 138be99e595289027c7c127e12356648 https://www.encodeproject.org/files/ENCFF082TXS/@@download/ENCFF082TXS.bigBed hg19 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption, low read length, moderate library complexity experiment not submitted to GEO ENCFF015NSS bigWig fold change over control ENCSR283ZRI ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2G-human ENCAB392AZR DNA SDS formaldehyde False 2017-12-01 ENCODE 1 ENCFF508DBG, ENCFF720NRD 220275167 ENCODE Processing Pipeline fee9822a0024fc6306faabb9cdbc0db6 https://www.encodeproject.org/files/ENCFF015NSS/@@download/ENCFF015NSS.bigWig hg19 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption, low read length, moderate library complexity experiment not submitted to GEO ENCFF852IKH bed narrowPeak conservative idr thresholded peaks ENCSR283ZRI ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2G-human ENCAB392AZR DNA SDS formaldehyde False 2017-12-01 ENCODE 1, 2 ENCFF001TDO, ENCFF102MCA, ENCFF663NYD, ENCFF791LFD 989712 ENCODE Processing Pipeline ec1d293bfbe9f11dc57ca31a66af95ef https://www.encodeproject.org/files/ENCFF852IKH/@@download/ENCFF852IKH.bed.gz hg19 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption, low read length, moderate library complexity experiment not submitted to GEO ENCFF151PMX bigWig fold change over control ENCSR283ZRI ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2G-human ENCAB392AZR DNA SDS formaldehyde False 2017-12-01 ENCODE 1, 2 ENCFF100PTE, ENCFF121RZC, ENCFF635IJT, ENCFF721LZU 431946230 ENCODE Processing Pipeline 80841cf2b1d96ef979e5cf95620ac17d https://www.encodeproject.org/files/ENCFF151PMX/@@download/ENCFF151PMX.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption, low read length, moderate library complexity experiment not submitted to GEO ENCFF856WKJ bed narrowPeak peaks ENCSR283ZRI ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2G-human ENCAB392AZR DNA SDS formaldehyde False 2017-12-01 ENCODE 1 ENCFF121RZC, ENCFF721LZU 6377037 ENCODE Processing Pipeline 160001ff110ec52d9aa0cb0df891d4d2 https://www.encodeproject.org/files/ENCFF856WKJ/@@download/ENCFF856WKJ.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption, low read length, moderate library complexity experiment not submitted to GEO ENCFF106SGM bigWig signal p-value ENCSR283ZRI ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2G-human ENCAB392AZR DNA SDS formaldehyde False 2017-12-01 ENCODE 1 ENCFF121RZC, ENCFF721LZU 466280137 ENCODE Processing Pipeline 97ce4726971400c48557357bdb970b8e https://www.encodeproject.org/files/ENCFF106SGM/@@download/ENCFF106SGM.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption, low read length, moderate library complexity experiment not submitted to GEO ENCFF301BHU bigWig signal p-value ENCSR283ZRI ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2G-human ENCAB392AZR DNA SDS formaldehyde False 2017-12-01 ENCODE 1, 2 ENCFF100PTE, ENCFF121RZC, ENCFF635IJT, ENCFF721LZU 743643177 ENCODE Processing Pipeline fd7dcdfe8f5820bc57d52ebce075dabf https://www.encodeproject.org/files/ENCFF301BHU/@@download/ENCFF301BHU.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption, low read length, moderate library complexity experiment not submitted to GEO ENCFF314SZG bigWig fold change over control ENCSR283ZRI ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2G-human ENCAB392AZR DNA SDS formaldehyde False 2017-12-01 ENCODE 1 ENCFF121RZC, ENCFF721LZU 220440472 ENCODE Processing Pipeline cd2325d8d72164cd7c5df4e78d1de850 https://www.encodeproject.org/files/ENCFF314SZG/@@download/ENCFF314SZG.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption, low read length, moderate library complexity experiment not submitted to GEO ENCFF659OHO bigWig signal p-value ENCSR283ZRI ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2G-human ENCAB392AZR DNA SDS formaldehyde False 2017-12-01 ENCODE 2 ENCFF100PTE, ENCFF635IJT 478128647 ENCODE Processing Pipeline 1b944b4186fc90419f1e326221681eb8 https://www.encodeproject.org/files/ENCFF659OHO/@@download/ENCFF659OHO.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption, low read length, moderate library complexity experiment not submitted to GEO ENCFF226OGI bigWig fold change over control ENCSR283ZRI ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2G-human ENCAB392AZR DNA SDS formaldehyde False 2017-12-01 ENCODE 2 ENCFF100PTE, ENCFF635IJT 194253271 ENCODE Processing Pipeline edf47ee433be078c4da6eb0e70e294a5 https://www.encodeproject.org/files/ENCFF226OGI/@@download/ENCFF226OGI.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption, low read length, moderate library complexity experiment not submitted to GEO ENCFF429REA bigBed narrowPeak peaks ENCSR283ZRI ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2G-human ENCAB392AZR DNA SDS formaldehyde False 2017-12-01 ENCODE 2 ENCFF260USW 10865981 ENCODE Processing Pipeline 3c15ead4d2aedac5ace12b66c578bc6e https://www.encodeproject.org/files/ENCFF429REA/@@download/ENCFF429REA.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption, low read length, moderate library complexity experiment not submitted to GEO ENCFF603VZJ bigBed narrowPeak conservative idr thresholded peaks ENCSR283ZRI ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2G-human ENCAB392AZR DNA SDS formaldehyde False 2017-12-01 ENCODE 1, 2 ENCFF791JTK 2034916 ENCODE Processing Pipeline 9dc10194ebf1afc350c8195c288203a3 https://www.encodeproject.org/files/ENCFF603VZJ/@@download/ENCFF603VZJ.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption, low read length, moderate library complexity experiment not submitted to GEO ENCFF260USW bed narrowPeak peaks ENCSR283ZRI ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2G-human ENCAB392AZR DNA SDS formaldehyde False 2017-12-01 ENCODE 2 ENCFF100PTE, ENCFF635IJT 6024118 ENCODE Processing Pipeline faf769b4011f5ca2fe2b1ce37326d102 https://www.encodeproject.org/files/ENCFF260USW/@@download/ENCFF260USW.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption, low read length, moderate library complexity experiment not submitted to GEO ENCFF791JTK bed narrowPeak conservative idr thresholded peaks ENCSR283ZRI ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2G-human ENCAB392AZR DNA SDS formaldehyde False 2017-12-01 ENCODE 1, 2 ENCFF260USW, ENCFF274KYK, ENCFF419RSJ, ENCFF856WKJ 989110 ENCODE Processing Pipeline 27b3908134693ec5c5d3d4caca21c9fb https://www.encodeproject.org/files/ENCFF791JTK/@@download/ENCFF791JTK.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption, low read length, moderate library complexity experiment not submitted to GEO ENCFF283CUY bed narrowPeak optimal idr thresholded peaks ENCSR283ZRI ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2G-human ENCAB392AZR DNA SDS formaldehyde False 2017-12-01 ENCODE 1, 2 ENCFF260USW, ENCFF274KYK, ENCFF419RSJ, ENCFF856WKJ 1022858 ENCODE Processing Pipeline 3df5a2aa20db7842e933d3420f523221 https://www.encodeproject.org/files/ENCFF283CUY/@@download/ENCFF283CUY.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption, low read length, moderate library complexity experiment not submitted to GEO ENCFF274KYK bed narrowPeak peaks ENCSR283ZRI ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2G-human ENCAB392AZR DNA SDS formaldehyde False 2017-12-01 ENCODE 1, 2 ENCFF100PTE, ENCFF121RZC, ENCFF635IJT, ENCFF721LZU 6824802 ENCODE Processing Pipeline 28cef2f5109c338dcd487daa298d0724 https://www.encodeproject.org/files/ENCFF274KYK/@@download/ENCFF274KYK.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption, low read length, moderate library complexity experiment not submitted to GEO ENCFF779KUH bigBed narrowPeak peaks ENCSR283ZRI ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2G-human ENCAB392AZR DNA SDS formaldehyde False 2017-12-01 ENCODE 1, 2 ENCFF274KYK 11131756 ENCODE Processing Pipeline 1bb491a3b2ae5b06cbb7452c423a042b https://www.encodeproject.org/files/ENCFF779KUH/@@download/ENCFF779KUH.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption, low read length, moderate library complexity experiment not submitted to GEO ENCFF846OXY bigBed narrowPeak peaks ENCSR283ZRI ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2G-human ENCAB392AZR DNA SDS formaldehyde False 2017-12-01 ENCODE 1 ENCFF856WKJ 11261420 ENCODE Processing Pipeline 601bfd20de7f1250d1fc28780adad83f https://www.encodeproject.org/files/ENCFF846OXY/@@download/ENCFF846OXY.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption, low read length, moderate library complexity experiment not submitted to GEO ENCFF648YPL bigBed narrowPeak optimal idr thresholded peaks ENCSR283ZRI ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2G-human ENCAB392AZR DNA SDS formaldehyde False 2017-12-01 ENCODE 1, 2 ENCFF283CUY 2087757 ENCODE Processing Pipeline 3721812892bc3537fd5d5a895758e8c0 https://www.encodeproject.org/files/ENCFF648YPL/@@download/ENCFF648YPL.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption, low read length, moderate library complexity experiment not submitted to GEO ENCFF124KEV fastq reads ENCSR171CAY ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F7-human ENCAB260LTI DNA False 2017-05-17 ENCODE 2 1 100 paired-ended 1 ENCFF584BPF 2434851966 Michael Snyder, Stanford 860894dd2811469c3325f32988386d7c SRA:SRR6212895 https://www.encodeproject.org/files/ENCFF124KEV/@@download/ENCFF124KEV.fastq.gz Illumina HiSeq 2000 /files/ENCFF240DTE/ released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF971CJJ fastq reads ENCSR171CAY ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F7-human ENCAB260LTI DNA False 2017-05-17 ENCODE 1 1 100 paired-ended 2 ENCFF928ZAS 2466912899 Michael Snyder, Stanford 8953543020745f11b7c3f75c562802e6 SRA:SRR6212894 https://www.encodeproject.org/files/ENCFF971CJJ/@@download/ENCFF971CJJ.fastq.gz Illumina HiSeq 2000 /files/ENCFF368UOC/ released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF928ZAS fastq reads ENCSR171CAY ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F7-human ENCAB260LTI DNA False 2017-05-17 ENCODE 1 1 100 paired-ended 1 ENCFF971CJJ 2432662797 Michael Snyder, Stanford 435645c943c14592b0f782a5a8500404 SRA:SRR6212894 https://www.encodeproject.org/files/ENCFF928ZAS/@@download/ENCFF928ZAS.fastq.gz Illumina HiSeq 2000 /files/ENCFF410PHD/ released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF584BPF fastq reads ENCSR171CAY ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F7-human ENCAB260LTI DNA False 2017-05-17 ENCODE 2 1 100 paired-ended 2 ENCFF124KEV 2466120854 Michael Snyder, Stanford 1e30c68ada42c8c994a66fe7a728dddf SRA:SRR6212895 https://www.encodeproject.org/files/ENCFF584BPF/@@download/ENCFF584BPF.fastq.gz Illumina HiSeq 2000 /files/ENCFF608MDV/ released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF930PEE bam unfiltered alignments ENCSR171CAY ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F7-human ENCAB260LTI DNA False 2017-05-17 ENCODE 2 100 ENCFF124KEV, ENCFF584BPF, ENCFF643CGH 5142572807 ENCODE Processing Pipeline d70d171bba435eb978ed4c6719319d51 https://www.encodeproject.org/files/ENCFF930PEE/@@download/ENCFF930PEE.bam GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF795FKF bam unfiltered alignments ENCSR171CAY ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F7-human ENCAB260LTI DNA False 2017-05-17 ENCODE 1 100 ENCFF807MUK, ENCFF928ZAS, ENCFF971CJJ 5299003878 ENCODE Processing Pipeline 1d313b5e06abd4dd8866ba60a0783067 https://www.encodeproject.org/files/ENCFF795FKF/@@download/ENCFF795FKF.bam hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF884LNX bam unfiltered alignments ENCSR171CAY ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F7-human ENCAB260LTI DNA False 2017-05-17 ENCODE 1 100 ENCFF643CGH, ENCFF928ZAS, ENCFF971CJJ 5302268861 ENCODE Processing Pipeline 7959babad9de706d779f7eea8cd1efe6 https://www.encodeproject.org/files/ENCFF884LNX/@@download/ENCFF884LNX.bam GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF340CRM bam unfiltered alignments ENCSR171CAY ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F7-human ENCAB260LTI DNA False 2017-05-17 ENCODE 2 100 ENCFF124KEV, ENCFF584BPF, ENCFF807MUK 5141099836 ENCODE Processing Pipeline 107a37460a1d46c75b58d78d370dd9a9 https://www.encodeproject.org/files/ENCFF340CRM/@@download/ENCFF340CRM.bam hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF246CLD bam alignments ENCSR171CAY ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F7-human ENCAB260LTI DNA False 2017-05-17 ENCODE 2 100 ENCFF124KEV, ENCFF584BPF, ENCFF643CGH 3215226032 ENCODE Processing Pipeline dc0315876240e3cfe3dcec4785e77fad https://www.encodeproject.org/files/ENCFF246CLD/@@download/ENCFF246CLD.bam GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF158RWF bam alignments ENCSR171CAY ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F7-human ENCAB260LTI DNA False 2017-05-17 ENCODE 1 100 ENCFF807MUK, ENCFF928ZAS, ENCFF971CJJ 3794979372 ENCODE Processing Pipeline a2f1f488c331aea69c4b91ead2d8fe08 https://www.encodeproject.org/files/ENCFF158RWF/@@download/ENCFF158RWF.bam hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF104VVO bam alignments ENCSR171CAY ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F7-human ENCAB260LTI DNA False 2017-05-17 ENCODE 1 100 ENCFF643CGH, ENCFF928ZAS, ENCFF971CJJ 3797103587 ENCODE Processing Pipeline 5ee3f125e8d13f2be45c7f4c68ca620d https://www.encodeproject.org/files/ENCFF104VVO/@@download/ENCFF104VVO.bam GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF851YDT bam alignments ENCSR171CAY ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F7-human ENCAB260LTI DNA False 2017-05-17 ENCODE 2 100 ENCFF124KEV, ENCFF584BPF, ENCFF807MUK 3213871873 ENCODE Processing Pipeline da44ff612dde64e74217e2a6b5075c5b https://www.encodeproject.org/files/ENCFF851YDT/@@download/ENCFF851YDT.bam hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF462LKS bigWig fold change over control ENCSR171CAY ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F7-human ENCAB260LTI DNA False 2017-05-17 ENCODE 1 ENCFF104VVO, ENCFF720AUK, ENCFF796JTX 1197840583 ENCODE Processing Pipeline 696aa01805177ee66449bf8674b8c113 https://www.encodeproject.org/files/ENCFF462LKS/@@download/ENCFF462LKS.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF905KWH bigWig signal p-value ENCSR171CAY ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F7-human ENCAB260LTI DNA False 2017-05-17 ENCODE 1 ENCFF104VVO, ENCFF720AUK, ENCFF796JTX 1094591953 ENCODE Processing Pipeline 6bfab70c68c31edc9732e4d032216491 https://www.encodeproject.org/files/ENCFF905KWH/@@download/ENCFF905KWH.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF533OEC bigWig signal p-value ENCSR171CAY ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F7-human ENCAB260LTI DNA False 2017-05-17 ENCODE 2 ENCFF246CLD, ENCFF720AUK, ENCFF796JTX 1048167214 ENCODE Processing Pipeline 04f5a3a72aa1e64f1a1931eb8a7356f3 https://www.encodeproject.org/files/ENCFF533OEC/@@download/ENCFF533OEC.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF596QQG bed narrowPeak peaks ENCSR171CAY ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F7-human ENCAB260LTI DNA False 2017-05-17 ENCODE 1 ENCFF104VVO, ENCFF720AUK, ENCFF796JTX 6119533 ENCODE Processing Pipeline b8bcc7de70a19175d487e4244f91e19f https://www.encodeproject.org/files/ENCFF596QQG/@@download/ENCFF596QQG.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF060HDY bigWig signal p-value ENCSR171CAY ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F7-human ENCAB260LTI DNA False 2017-05-17 ENCODE 1, 2 ENCFF104VVO, ENCFF246CLD, ENCFF720AUK, ENCFF796JTX 1492839925 ENCODE Processing Pipeline 6d46634dccfe37a9e04759dd8feef831 https://www.encodeproject.org/files/ENCFF060HDY/@@download/ENCFF060HDY.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF898WGW bigWig fold change over control ENCSR171CAY ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F7-human ENCAB260LTI DNA False 2017-05-17 ENCODE 2 ENCFF246CLD, ENCFF720AUK, ENCFF796JTX 1090696986 ENCODE Processing Pipeline 597ca274769f4a117d81e1e20ba338da https://www.encodeproject.org/files/ENCFF898WGW/@@download/ENCFF898WGW.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF349HMF bigBed narrowPeak peaks ENCSR171CAY ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F7-human ENCAB260LTI DNA False 2017-05-17 ENCODE 1 ENCFF596QQG 11292916 ENCODE Processing Pipeline 9f2da878de8953e7544ccb14fc47ecbb https://www.encodeproject.org/files/ENCFF349HMF/@@download/ENCFF349HMF.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF108MZX bed narrowPeak peaks ENCSR171CAY ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F7-human ENCAB260LTI DNA False 2017-05-17 ENCODE 2 ENCFF246CLD, ENCFF720AUK, ENCFF796JTX 5951461 ENCODE Processing Pipeline c8f6404ade36f5adf95dfc7c0bd287d2 https://www.encodeproject.org/files/ENCFF108MZX/@@download/ENCFF108MZX.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF440ZUU bigBed narrowPeak peaks ENCSR171CAY ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F7-human ENCAB260LTI DNA False 2017-05-17 ENCODE 2 ENCFF108MZX 11328593 ENCODE Processing Pipeline cca41c091b445085dc2e44b2813c23bf https://www.encodeproject.org/files/ENCFF440ZUU/@@download/ENCFF440ZUU.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF013EHI bed narrowPeak optimal idr thresholded peaks ENCSR171CAY ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F7-human ENCAB260LTI DNA False 2017-05-17 ENCODE 1, 2 ENCFF108MZX, ENCFF419RSJ, ENCFF505RTU, ENCFF596QQG 58792 ENCODE Processing Pipeline ec6f331bac36a3d59fc3b1c9c9a1aef2 https://www.encodeproject.org/files/ENCFF013EHI/@@download/ENCFF013EHI.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF579FTT bigBed narrowPeak optimal idr thresholded peaks ENCSR171CAY ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F7-human ENCAB260LTI DNA False 2017-05-17 ENCODE 1, 2 ENCFF013EHI 153300 ENCODE Processing Pipeline aae35a75316d5e50a076ada6a90f88f9 https://www.encodeproject.org/files/ENCFF579FTT/@@download/ENCFF579FTT.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF896XZH bigWig fold change over control ENCSR171CAY ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F7-human ENCAB260LTI DNA False 2017-05-17 ENCODE 1, 2 ENCFF104VVO, ENCFF246CLD, ENCFF720AUK, ENCFF796JTX 1647371126 ENCODE Processing Pipeline 8bae27fd90f52ce400723d42bf2609dc https://www.encodeproject.org/files/ENCFF896XZH/@@download/ENCFF896XZH.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF777IXN bigBed narrowPeak peaks ENCSR171CAY ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F7-human ENCAB260LTI DNA False 2017-05-17 ENCODE 1, 2 ENCFF505RTU 10969911 ENCODE Processing Pipeline 384c545fabc525d110a122e2aeb05d23 https://www.encodeproject.org/files/ENCFF777IXN/@@download/ENCFF777IXN.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF910WWV bed narrowPeak conservative idr thresholded peaks ENCSR171CAY ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F7-human ENCAB260LTI DNA False 2017-05-17 ENCODE 1, 2 ENCFF108MZX, ENCFF419RSJ, ENCFF505RTU, ENCFF596QQG 46020 ENCODE Processing Pipeline d9bfbad5d75440c5348e0129e544fd3a https://www.encodeproject.org/files/ENCFF910WWV/@@download/ENCFF910WWV.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF335EMO bigBed narrowPeak conservative idr thresholded peaks ENCSR171CAY ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F7-human ENCAB260LTI DNA False 2017-05-17 ENCODE 1, 2 ENCFF910WWV 134502 ENCODE Processing Pipeline e99be42f34a140a9d7ab22e2dd70763f https://www.encodeproject.org/files/ENCFF335EMO/@@download/ENCFF335EMO.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF505RTU bed narrowPeak peaks ENCSR171CAY ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F7-human ENCAB260LTI DNA False 2017-05-17 ENCODE 1, 2 ENCFF104VVO, ENCFF246CLD, ENCFF720AUK, ENCFF796JTX 6778720 ENCODE Processing Pipeline d7a99efd5ba2f8241b7b11313a9cfdf2 https://www.encodeproject.org/files/ENCFF505RTU/@@download/ENCFF505RTU.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF125KIG bigWig fold change over control ENCSR171CAY ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F7-human ENCAB260LTI DNA False 2017-05-17 ENCODE 2 ENCFF262CJE, ENCFF506DFV, ENCFF851YDT 1090934255 ENCODE Processing Pipeline ff8af155985ff6dc94e1975e13445f4a https://www.encodeproject.org/files/ENCFF125KIG/@@download/ENCFF125KIG.bigWig hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF649PUW bed narrowPeak peaks ENCSR171CAY ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F7-human ENCAB260LTI DNA False 2017-05-17 ENCODE 1 ENCFF158RWF, ENCFF262CJE, ENCFF506DFV 6116974 ENCODE Processing Pipeline 547bd70b8c068f6f139acc80b31b39da https://www.encodeproject.org/files/ENCFF649PUW/@@download/ENCFF649PUW.bed.gz hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF511NCS bed narrowPeak peaks ENCSR171CAY ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F7-human ENCAB260LTI DNA False 2017-05-17 ENCODE 1, 2 ENCFF158RWF, ENCFF262CJE, ENCFF506DFV, ENCFF851YDT 6775439 ENCODE Processing Pipeline b26eb16256e9113023802d6813e2adf1 https://www.encodeproject.org/files/ENCFF511NCS/@@download/ENCFF511NCS.bed.gz hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF307PKQ bigWig signal p-value ENCSR171CAY ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F7-human ENCAB260LTI DNA False 2017-05-17 ENCODE 1, 2 ENCFF158RWF, ENCFF262CJE, ENCFF506DFV, ENCFF851YDT 1431585091 ENCODE Processing Pipeline 49273826c246f0c3cf53da3d3caa9c04 https://www.encodeproject.org/files/ENCFF307PKQ/@@download/ENCFF307PKQ.bigWig hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF647ARK bigBed narrowPeak peaks ENCSR171CAY ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F7-human ENCAB260LTI DNA False 2017-05-17 ENCODE 1 ENCFF649PUW 11273054 ENCODE Processing Pipeline 4b9d4c7d85bb5d612029bc74e7067cb2 https://www.encodeproject.org/files/ENCFF647ARK/@@download/ENCFF647ARK.bigBed hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF407IBB bigWig signal p-value ENCSR171CAY ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F7-human ENCAB260LTI DNA False 2017-05-17 ENCODE 1 ENCFF158RWF, ENCFF262CJE, ENCFF506DFV 1292755861 ENCODE Processing Pipeline 1b77227caded0d28e2e8a689e3f17910 https://www.encodeproject.org/files/ENCFF407IBB/@@download/ENCFF407IBB.bigWig hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF300UZF bigWig fold change over control ENCSR171CAY ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F7-human ENCAB260LTI DNA False 2017-05-17 ENCODE 1 ENCFF158RWF, ENCFF262CJE, ENCFF506DFV 1194867405 ENCODE Processing Pipeline c39d32879489592d13cddbe61848be24 https://www.encodeproject.org/files/ENCFF300UZF/@@download/ENCFF300UZF.bigWig hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF210HPA bigWig signal p-value ENCSR171CAY ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F7-human ENCAB260LTI DNA False 2017-05-17 ENCODE 2 ENCFF262CJE, ENCFF506DFV, ENCFF851YDT 1033055687 ENCODE Processing Pipeline 48fe4319ae553f12ecbeba380b633c15 https://www.encodeproject.org/files/ENCFF210HPA/@@download/ENCFF210HPA.bigWig hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF384FEX bed narrowPeak peaks ENCSR171CAY ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F7-human ENCAB260LTI DNA False 2017-05-17 ENCODE 2 ENCFF262CJE, ENCFF506DFV, ENCFF851YDT 5954915 ENCODE Processing Pipeline cd518e0e1b3e7bf35d91cf484ccb44f1 https://www.encodeproject.org/files/ENCFF384FEX/@@download/ENCFF384FEX.bed.gz hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF092HAB bigBed narrowPeak peaks ENCSR171CAY ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F7-human ENCAB260LTI DNA False 2017-05-17 ENCODE 2 ENCFF384FEX 11311268 ENCODE Processing Pipeline a878653f264459bd9ee885808d6a91d8 https://www.encodeproject.org/files/ENCFF092HAB/@@download/ENCFF092HAB.bigBed hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF103XPY bigWig fold change over control ENCSR171CAY ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F7-human ENCAB260LTI DNA False 2017-05-17 ENCODE 1, 2 ENCFF158RWF, ENCFF262CJE, ENCFF506DFV, ENCFF851YDT 1655828931 ENCODE Processing Pipeline 63fe0e4d224a5fa21ac816174ceb19de https://www.encodeproject.org/files/ENCFF103XPY/@@download/ENCFF103XPY.bigWig hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF464ISB bigBed narrowPeak optimal idr thresholded peaks ENCSR171CAY ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F7-human ENCAB260LTI DNA False 2017-05-17 ENCODE 1, 2 ENCFF310AGG 153158 ENCODE Processing Pipeline 0de2ea98a3fe5a635bee804a842e560d https://www.encodeproject.org/files/ENCFF464ISB/@@download/ENCFF464ISB.bigBed hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF217IVZ bigBed narrowPeak peaks ENCSR171CAY ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F7-human ENCAB260LTI DNA False 2017-05-17 ENCODE 1, 2 ENCFF511NCS 10957791 ENCODE Processing Pipeline e484832ebb15bd53109babbbbefb33fa https://www.encodeproject.org/files/ENCFF217IVZ/@@download/ENCFF217IVZ.bigBed hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF987GXS bed narrowPeak conservative idr thresholded peaks ENCSR171CAY ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F7-human ENCAB260LTI DNA False 2017-05-17 ENCODE 1, 2 ENCFF001TDO, ENCFF384FEX, ENCFF511NCS, ENCFF649PUW 45337 ENCODE Processing Pipeline 1813a53bd4e912a3e39083983ac631e7 https://www.encodeproject.org/files/ENCFF987GXS/@@download/ENCFF987GXS.bed.gz hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF683VLI bigBed narrowPeak conservative idr thresholded peaks ENCSR171CAY ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F7-human ENCAB260LTI DNA False 2017-05-17 ENCODE 1, 2 ENCFF987GXS 132273 ENCODE Processing Pipeline 02a787f7994118b38df7bfb8532dfeee https://www.encodeproject.org/files/ENCFF683VLI/@@download/ENCFF683VLI.bigBed hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF310AGG bed narrowPeak optimal idr thresholded peaks ENCSR171CAY ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F7-human ENCAB260LTI DNA False 2017-05-17 ENCODE 1, 2 ENCFF001TDO, ENCFF384FEX, ENCFF511NCS, ENCFF649PUW 59622 ENCODE Processing Pipeline 8660b9cd4ca65717017ecba1ad02391d https://www.encodeproject.org/files/ENCFF310AGG/@@download/ENCFF310AGG.bed.gz hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF000YTL bam alignments ENCSR000FAE ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAX-human ENCAB000AIL DNA see document see document False 2011-10-29 ENCODE 1 ENCFF000YTY 272408741 Sherman Weissman, Yale 84b2551b5afc83e52c79f10906bbb48a https://www.encodeproject.org/files/ENCFF000YTL/@@download/ENCFF000YTL.bam hg19 released biological replicates with identical biosample insufficient read length ENCFF000YTM bam alignments ENCSR000FAE ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAX-human ENCAB000AIL DNA see document see document False 2011-10-29 ENCODE 2 ENCFF000YTX 199666019 Sherman Weissman, Yale 09167fd890f54da236675706d565c07d https://www.encodeproject.org/files/ENCFF000YTM/@@download/ENCFF000YTM.bam hg19 released biological replicates with identical biosample insufficient read length ENCFF000YTN bigBed narrowPeak peaks ENCSR000FAE ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAX-human ENCAB000AIL DNA see document see document False 2011-10-29 ENCODE ENCFF001VNT 154000 Sherman Weissman, Yale 055a639182ecf34b3a9281a9776a3828 https://www.encodeproject.org/files/ENCFF000YTN/@@download/ENCFF000YTN.bigBed hg19 released biological replicates with identical biosample insufficient read length ENCFF000YTO bigWig signal ENCSR000FAE ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAX-human ENCAB000AIL DNA see document see document False 2011-10-29 ENCODE 303426251 Sherman Weissman, Yale e6a3199b5c46f495b80f940aeab9fdb5 https://www.encodeproject.org/files/ENCFF000YTO/@@download/ENCFF000YTO.bigWig hg19 released biological replicates with identical biosample, missing derived_from insufficient read length ENCFF000YTX fastq reads ENCSR000FAE ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAX-human ENCAB000AIL DNA see document see document False 2011-10-29 ENCODE 2 1 27 single-ended 151271889 Sherman Weissman, Yale 20d1a9f2cd0ffb6ec3e270a8ea01a1c2 https://www.encodeproject.org/files/ENCFF000YTX/@@download/ENCFF000YTX.fastq.gz Illumina Genome Analyzer released biological replicates with identical biosample insufficient read length, missing controlled_by ENCFF000YTY fastq reads ENCSR000FAE ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAX-human ENCAB000AIL DNA see document see document False 2011-10-29 ENCODE 1 1 27 single-ended 208419994 Sherman Weissman, Yale bde2fe8c862e7083744b70ac85d4937d https://www.encodeproject.org/files/ENCFF000YTY/@@download/ENCFF000YTY.fastq.gz Illumina Genome Analyzer released biological replicates with identical biosample insufficient read length, missing controlled_by ENCFF001VNT bed narrowPeak peaks ENCSR000FAE ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAX-human ENCAB000AIL DNA see document see document False 2011-10-29 ENCODE 45577 Sherman Weissman, Yale a19aaf8abd95dbbb946feef40beb6e21 https://www.encodeproject.org/files/ENCFF001VNT/@@download/ENCFF001VNT.bed.gz hg19 released biological replicates with identical biosample, missing derived_from insufficient read length ENCFF000ZDL bigBed narrowPeak peaks ENCSR000EWF ChIP-seq EFO:0002067 K562 cell line Homo sapiens YY1-human ENCAB000ANS DNA see document see document False 2011-10-29 ENCODE ENCFF001VPJ 211206 Peggy Farnham, USC 7bebeb5d0afc64f4b78251e7aa304da9 https://www.encodeproject.org/files/ENCFF000ZDL/@@download/ENCFF000ZDL.bigBed hg19 archived borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF000ZDM bigWig signal ENCSR000EWF ChIP-seq EFO:0002067 K562 cell line Homo sapiens YY1-human ENCAB000ANS DNA see document see document False 2011-10-29 ENCODE 395495819 Peggy Farnham, USC 95ba0b84c89f95f0adabdc16ad5c7015 https://www.encodeproject.org/files/ENCFF000ZDM/@@download/ENCFF000ZDM.bigWig hg19 archived borderline replicate concordance biological replicates with identical biosample, missing derived_from insufficient read length, insufficient read depth ENCFF000ZDN bam alignments ENCSR000EWF ChIP-seq EFO:0002067 K562 cell line Homo sapiens YY1-human ENCAB000ANS DNA see document see document False 2011-10-29 ENCODE 1 ENCFF000ZEJ 643150126 Peggy Farnham, USC 9702f59bd9f872105fabb16bc6a058dd https://www.encodeproject.org/files/ENCFF000ZDN/@@download/ENCFF000ZDN.bam hg19 archived borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF000ZDO bam alignments ENCSR000EWF ChIP-seq EFO:0002067 K562 cell line Homo sapiens YY1-human ENCAB000ANS DNA see document see document False 2011-10-29 ENCODE 2 ENCFF000ZEK 610506402 Peggy Farnham, USC bf0009aa1cb277412ecaa1b84dc60758 https://www.encodeproject.org/files/ENCFF000ZDO/@@download/ENCFF000ZDO.bam hg19 archived borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF000ZEJ fastq reads ENCSR000EWF ChIP-seq EFO:0002067 K562 cell line Homo sapiens YY1-human ENCAB000ANS DNA see document see document False 2011-10-29 ENCODE 1 1 32 single-ended 518093065 Peggy Farnham, USC 347902ae6684d452b633b42e910e5753 https://www.encodeproject.org/files/ENCFF000ZEJ/@@download/ENCFF000ZEJ.fastq.gz Illumina Genome Analyzer /files/ENCFF000VEK/ released borderline replicate concordance, inconsistent control read length biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF000ZEK fastq reads ENCSR000EWF ChIP-seq EFO:0002067 K562 cell line Homo sapiens YY1-human ENCAB000ANS DNA see document see document False 2011-10-29 ENCODE 2 1 32 single-ended 478956711 Peggy Farnham, USC 5fc336059c08b7b6de7e8c92ff207ec7 https://www.encodeproject.org/files/ENCFF000ZEK/@@download/ENCFF000ZEK.fastq.gz Illumina Genome Analyzer /files/ENCFF000VEK/ released borderline replicate concordance, inconsistent control read length biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF001VPJ bed narrowPeak peaks ENCSR000EWF ChIP-seq EFO:0002067 K562 cell line Homo sapiens YY1-human ENCAB000ANS DNA see document see document False 2011-10-29 ENCODE 76019 Peggy Farnham, USC ef2a46485852ced4e03750fda5db807e https://www.encodeproject.org/files/ENCFF001VPJ/@@download/ENCFF001VPJ.bed.gz hg19 archived borderline replicate concordance biological replicates with identical biosample, missing derived_from insufficient read length, insufficient read depth ENCFF002CYQ bed narrowPeak optimal idr thresholded peaks ENCSR000EWF ChIP-seq EFO:0002067 K562 cell line Homo sapiens YY1-human ENCAB000ANS DNA see document see document False 2011-10-29 ENCODE 104777 ENCODE Consortium Analysis Working Group 940cef4ff84d4b47a11d8fd9e57f53ca https://www.encodeproject.org/files/ENCFF002CYQ/@@download/ENCFF002CYQ.bed.gz hg19 archived borderline replicate concordance biological replicates with identical biosample, missing derived_from insufficient read length, insufficient read depth ENCFF726FSZ bigBed narrowPeak optimal idr thresholded peaks ENCSR000EWF ChIP-seq EFO:0002067 K562 cell line Homo sapiens YY1-human ENCAB000ANS DNA see document see document False 2011-10-29 ENCODE ENCFF002CYQ 273588 ENCODE Consortium 8e7072590662161cb1fa27f47a56081f https://www.encodeproject.org/files/ENCFF726FSZ/@@download/ENCFF726FSZ.bigBed hg19 archived borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF798NNI bed narrowPeak peaks ENCSR000EWF ChIP-seq EFO:0002067 K562 cell line Homo sapiens YY1-human ENCAB000ANS DNA see document see document False 2011-10-29 ENCODE 1 ENCFF355SGP, ENCFF633CMO 1647800 ENCODE Processing Pipeline 67907a147a81318ec5289b2a9c391116 https://www.encodeproject.org/files/ENCFF798NNI/@@download/ENCFF798NNI.bed.gz GRCh38 released borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF329XCJ bed narrowPeak peaks ENCSR000EWF ChIP-seq EFO:0002067 K562 cell line Homo sapiens YY1-human ENCAB000ANS DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF139WUV, ENCFF355SGP, ENCFF633CMO 4680067 ENCODE Processing Pipeline e200ffa5f59600afae960e5334703e5a https://www.encodeproject.org/files/ENCFF329XCJ/@@download/ENCFF329XCJ.bed.gz GRCh38 released borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF243GTZ bigBed narrowPeak peaks ENCSR000EWF ChIP-seq EFO:0002067 K562 cell line Homo sapiens YY1-human ENCAB000ANS DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF329XCJ 10831889 ENCODE Processing Pipeline 343c70b21386019dd8250f73a9638dfc https://www.encodeproject.org/files/ENCFF243GTZ/@@download/ENCFF243GTZ.bigBed GRCh38 released borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF629EQZ bigBed narrowPeak optimal idr thresholded peaks ENCSR000EWF ChIP-seq EFO:0002067 K562 cell line Homo sapiens YY1-human ENCAB000ANS DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF635XCI 212598 ENCODE Processing Pipeline 2722c92451f96a22468d7e402ffd38d0 https://www.encodeproject.org/files/ENCFF629EQZ/@@download/ENCFF629EQZ.bigBed GRCh38 released borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF633CMO bam alignments ENCSR000EWF ChIP-seq EFO:0002067 K562 cell line Homo sapiens YY1-human ENCAB000ANS DNA see document see document False 2011-10-29 ENCODE 1 32 ENCFF000ZEJ, ENCFF643CGH 293165137 ENCODE Processing Pipeline 27240f623a95b1593b7ed5612e00fa71 https://www.encodeproject.org/files/ENCFF633CMO/@@download/ENCFF633CMO.bam GRCh38 released borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF606IAN bigWig signal p-value ENCSR000EWF ChIP-seq EFO:0002067 K562 cell line Homo sapiens YY1-human ENCAB000ANS DNA see document see document False 2011-10-29 ENCODE 2 ENCFF139WUV, ENCFF355SGP 379355874 ENCODE Processing Pipeline 402b4768c6388e7318468bbcf79fa2c1 https://www.encodeproject.org/files/ENCFF606IAN/@@download/ENCFF606IAN.bigWig GRCh38 released borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF477WFX bigWig fold change over control ENCSR000EWF ChIP-seq EFO:0002067 K562 cell line Homo sapiens YY1-human ENCAB000ANS DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF139WUV, ENCFF355SGP, ENCFF633CMO 286635602 ENCODE Processing Pipeline a6854abc3d224aa8a22bc96fb6bf7090 https://www.encodeproject.org/files/ENCFF477WFX/@@download/ENCFF477WFX.bigWig GRCh38 released borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF744IBC bigBed narrowPeak peaks ENCSR000EWF ChIP-seq EFO:0002067 K562 cell line Homo sapiens YY1-human ENCAB000ANS DNA see document see document False 2011-10-29 ENCODE 1 ENCFF798NNI 3776167 ENCODE Processing Pipeline ec517ce75460bd284f1a9720284abcf2 https://www.encodeproject.org/files/ENCFF744IBC/@@download/ENCFF744IBC.bigBed GRCh38 released borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF838CZP bigBed narrowPeak peaks ENCSR000EWF ChIP-seq EFO:0002067 K562 cell line Homo sapiens YY1-human ENCAB000ANS DNA see document see document False 2011-10-29 ENCODE 2 ENCFF256EZU 7437798 ENCODE Processing Pipeline 3e615f111770eb48d21e3cc4dc732579 https://www.encodeproject.org/files/ENCFF838CZP/@@download/ENCFF838CZP.bigBed GRCh38 released borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF632ZHY bed narrowPeak conservative idr thresholded peaks ENCSR000EWF ChIP-seq EFO:0002067 K562 cell line Homo sapiens YY1-human ENCAB000ANS DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF256EZU, ENCFF329XCJ, ENCFF419RSJ, ENCFF798NNI 75768 ENCODE Processing Pipeline 46f3963e5765570315a72682c2f16aaf https://www.encodeproject.org/files/ENCFF632ZHY/@@download/ENCFF632ZHY.bed.gz GRCh38 released borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF741LGU bam unfiltered alignments ENCSR000EWF ChIP-seq EFO:0002067 K562 cell line Homo sapiens YY1-human ENCAB000ANS DNA see document see document False 2011-10-29 ENCODE 1 32 ENCFF000ZEJ, ENCFF643CGH 645832794 ENCODE Processing Pipeline 3b96fcddecd71679943eb7031c346038 https://www.encodeproject.org/files/ENCFF741LGU/@@download/ENCFF741LGU.bam GRCh38 released borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF139WUV bam alignments ENCSR000EWF ChIP-seq EFO:0002067 K562 cell line Homo sapiens YY1-human ENCAB000ANS DNA see document see document False 2011-10-29 ENCODE 2 32 ENCFF000ZEK, ENCFF643CGH 283706447 ENCODE Processing Pipeline dd62533544a4306b6eb50fb31e8af518 https://www.encodeproject.org/files/ENCFF139WUV/@@download/ENCFF139WUV.bam GRCh38 released borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF142INJ bigWig fold change over control ENCSR000EWF ChIP-seq EFO:0002067 K562 cell line Homo sapiens YY1-human ENCAB000ANS DNA see document see document False 2011-10-29 ENCODE 1 ENCFF355SGP, ENCFF633CMO 140176068 ENCODE Processing Pipeline 3beaa87efc1296ce9446e06a792b9baa https://www.encodeproject.org/files/ENCFF142INJ/@@download/ENCFF142INJ.bigWig GRCh38 released borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF641BFU bigBed narrowPeak conservative idr thresholded peaks ENCSR000EWF ChIP-seq EFO:0002067 K562 cell line Homo sapiens YY1-human ENCAB000ANS DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF632ZHY 187434 ENCODE Processing Pipeline 5c028beaea17ddf7e0642be76faee3cd https://www.encodeproject.org/files/ENCFF641BFU/@@download/ENCFF641BFU.bigBed GRCh38 released borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF670LXM bam unfiltered alignments ENCSR000EWF ChIP-seq EFO:0002067 K562 cell line Homo sapiens YY1-human ENCAB000ANS DNA see document see document False 2011-10-29 ENCODE 2 32 ENCFF000ZEK, ENCFF643CGH 612485045 ENCODE Processing Pipeline 6e89aabbb89aaf07611535b671f5c95e https://www.encodeproject.org/files/ENCFF670LXM/@@download/ENCFF670LXM.bam GRCh38 released borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF553CWG bigWig signal p-value ENCSR000EWF ChIP-seq EFO:0002067 K562 cell line Homo sapiens YY1-human ENCAB000ANS DNA see document see document False 2011-10-29 ENCODE 1 ENCFF355SGP, ENCFF633CMO 372939489 ENCODE Processing Pipeline e2984e010e1cb8890f368e06daabd1f6 https://www.encodeproject.org/files/ENCFF553CWG/@@download/ENCFF553CWG.bigWig GRCh38 released borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF577NSA bigWig signal p-value ENCSR000EWF ChIP-seq EFO:0002067 K562 cell line Homo sapiens YY1-human ENCAB000ANS DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF139WUV, ENCFF355SGP, ENCFF633CMO 463924213 ENCODE Processing Pipeline 2010d6e0d2b6965acecfbb37b08d789f https://www.encodeproject.org/files/ENCFF577NSA/@@download/ENCFF577NSA.bigWig GRCh38 released borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF346YID bigWig fold change over control ENCSR000EWF ChIP-seq EFO:0002067 K562 cell line Homo sapiens YY1-human ENCAB000ANS DNA see document see document False 2011-10-29 ENCODE 2 ENCFF139WUV, ENCFF355SGP 167601226 ENCODE Processing Pipeline d4d1af1dbfd68e11dc88c692e11c1312 https://www.encodeproject.org/files/ENCFF346YID/@@download/ENCFF346YID.bigWig GRCh38 released borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF256EZU bed narrowPeak peaks ENCSR000EWF ChIP-seq EFO:0002067 K562 cell line Homo sapiens YY1-human ENCAB000ANS DNA see document see document False 2011-10-29 ENCODE 2 ENCFF139WUV, ENCFF355SGP 3120021 ENCODE Processing Pipeline 5ecf6d529f6490697598a450dd91da03 https://www.encodeproject.org/files/ENCFF256EZU/@@download/ENCFF256EZU.bed.gz GRCh38 released borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF635XCI bed narrowPeak optimal idr thresholded peaks ENCSR000EWF ChIP-seq EFO:0002067 K562 cell line Homo sapiens YY1-human ENCAB000ANS DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF256EZU, ENCFF329XCJ, ENCFF419RSJ, ENCFF798NNI 93625 ENCODE Processing Pipeline 4545455201e3285ee2249fc874722330 https://www.encodeproject.org/files/ENCFF635XCI/@@download/ENCFF635XCI.bed.gz GRCh38 released borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF566NKP bam alignments ENCSR000EWF ChIP-seq EFO:0002067 K562 cell line Homo sapiens YY1-human ENCAB000ANS DNA see document see document False 2011-10-29 ENCODE 2 32 ENCFF000ZEK, ENCFF807MUK 284142408 ENCODE Processing Pipeline d28da66381c066f47a0d7133fd3dfee5 https://www.encodeproject.org/files/ENCFF566NKP/@@download/ENCFF566NKP.bam hg19 released borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF397BXS bam unfiltered alignments ENCSR000EWF ChIP-seq EFO:0002067 K562 cell line Homo sapiens YY1-human ENCAB000ANS DNA see document see document False 2011-10-29 ENCODE 1 32 ENCFF000ZEJ, ENCFF807MUK 644219493 ENCODE Processing Pipeline db9348d5dabc863ec58e1b0da0a2f07e https://www.encodeproject.org/files/ENCFF397BXS/@@download/ENCFF397BXS.bam hg19 released borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF931LTD bigWig signal p-value ENCSR000EWF ChIP-seq EFO:0002067 K562 cell line Homo sapiens YY1-human ENCAB000ANS DNA see document see document False 2011-10-29 ENCODE 1 ENCFF051ZZR, ENCFF193QAR 437772632 ENCODE Processing Pipeline f24a2555e4aa4878e50deee6d415fa53 https://www.encodeproject.org/files/ENCFF931LTD/@@download/ENCFF931LTD.bigWig hg19 released borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF247BYG bigWig signal p-value ENCSR000EWF ChIP-seq EFO:0002067 K562 cell line Homo sapiens YY1-human ENCAB000ANS DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF051ZZR, ENCFF193QAR, ENCFF566NKP 492469925 ENCODE Processing Pipeline f5ea4513f3354b544021b846e82254e3 https://www.encodeproject.org/files/ENCFF247BYG/@@download/ENCFF247BYG.bigWig hg19 released borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF193QAR bam alignments ENCSR000EWF ChIP-seq EFO:0002067 K562 cell line Homo sapiens YY1-human ENCAB000ANS DNA see document see document False 2011-10-29 ENCODE 1 32 ENCFF000ZEJ, ENCFF807MUK 293535188 ENCODE Processing Pipeline 8be94d5d41c2c44052f16a546987a860 https://www.encodeproject.org/files/ENCFF193QAR/@@download/ENCFF193QAR.bam hg19 released borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF274FVJ bam unfiltered alignments ENCSR000EWF ChIP-seq EFO:0002067 K562 cell line Homo sapiens YY1-human ENCAB000ANS DNA see document see document False 2011-10-29 ENCODE 2 32 ENCFF000ZEK, ENCFF807MUK 611211458 ENCODE Processing Pipeline 937788457b87c665f8dc24e190d6bdcb https://www.encodeproject.org/files/ENCFF274FVJ/@@download/ENCFF274FVJ.bam hg19 released borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF829HEO bigWig signal p-value ENCSR000EWF ChIP-seq EFO:0002067 K562 cell line Homo sapiens YY1-human ENCAB000ANS DNA see document see document False 2011-10-29 ENCODE 2 ENCFF051ZZR, ENCFF566NKP 337456366 ENCODE Processing Pipeline 34d9b8695ba50522452e9ba2585dde31 https://www.encodeproject.org/files/ENCFF829HEO/@@download/ENCFF829HEO.bigWig hg19 released borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF057PQP bigWig fold change over control ENCSR000EWF ChIP-seq EFO:0002067 K562 cell line Homo sapiens YY1-human ENCAB000ANS DNA see document see document False 2011-10-29 ENCODE 2 ENCFF051ZZR, ENCFF566NKP 162354809 ENCODE Processing Pipeline b9127c7da4a43c51c1982f2a31c107f9 https://www.encodeproject.org/files/ENCFF057PQP/@@download/ENCFF057PQP.bigWig hg19 released borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF445VEZ bigWig fold change over control ENCSR000EWF ChIP-seq EFO:0002067 K562 cell line Homo sapiens YY1-human ENCAB000ANS DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF051ZZR, ENCFF193QAR, ENCFF566NKP 278414568 ENCODE Processing Pipeline 26a7a480d1b2b0b2b41275d5264e392e https://www.encodeproject.org/files/ENCFF445VEZ/@@download/ENCFF445VEZ.bigWig hg19 released borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF211PND bed narrowPeak peaks ENCSR000EWF ChIP-seq EFO:0002067 K562 cell line Homo sapiens YY1-human ENCAB000ANS DNA see document see document False 2011-10-29 ENCODE 2 ENCFF051ZZR, ENCFF566NKP 3133805 ENCODE Processing Pipeline 7b3c014da2fb8c5e41950d2bd25f182f https://www.encodeproject.org/files/ENCFF211PND/@@download/ENCFF211PND.bed.gz hg19 released borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF951GSR bigBed narrowPeak peaks ENCSR000EWF ChIP-seq EFO:0002067 K562 cell line Homo sapiens YY1-human ENCAB000ANS DNA see document see document False 2011-10-29 ENCODE 1 ENCFF899XEM 3908453 ENCODE Processing Pipeline 4893cd51df56ef42ca623e82456c2d8c https://www.encodeproject.org/files/ENCFF951GSR/@@download/ENCFF951GSR.bigBed hg19 released borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF557DSM bed narrowPeak optimal idr thresholded peaks ENCSR000EWF ChIP-seq EFO:0002067 K562 cell line Homo sapiens YY1-human ENCAB000ANS DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF001TDO, ENCFF211PND, ENCFF228AYO, ENCFF899XEM 93049 ENCODE Processing Pipeline cf8ffec94a9b83f40812443c565a6a17 https://www.encodeproject.org/files/ENCFF557DSM/@@download/ENCFF557DSM.bed.gz hg19 released borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF629CAA bigWig fold change over control ENCSR000EWF ChIP-seq EFO:0002067 K562 cell line Homo sapiens YY1-human ENCAB000ANS DNA see document see document False 2011-10-29 ENCODE 1 ENCFF051ZZR, ENCFF193QAR 139759951 ENCODE Processing Pipeline 87f378d227445039dd82910e4f93fb6e https://www.encodeproject.org/files/ENCFF629CAA/@@download/ENCFF629CAA.bigWig hg19 released borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF853DHJ bigBed narrowPeak conservative idr thresholded peaks ENCSR000EWF ChIP-seq EFO:0002067 K562 cell line Homo sapiens YY1-human ENCAB000ANS DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF291MOZ 190016 ENCODE Processing Pipeline 7d01813edfbee67831648f80be09c5c5 https://www.encodeproject.org/files/ENCFF853DHJ/@@download/ENCFF853DHJ.bigBed hg19 released borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF899XEM bed narrowPeak peaks ENCSR000EWF ChIP-seq EFO:0002067 K562 cell line Homo sapiens YY1-human ENCAB000ANS DNA see document see document False 2011-10-29 ENCODE 1 ENCFF051ZZR, ENCFF193QAR 1723059 ENCODE Processing Pipeline 682a1f74ecb0c3f653a3f0f457a3fdb1 https://www.encodeproject.org/files/ENCFF899XEM/@@download/ENCFF899XEM.bed.gz hg19 released borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF228AYO bed narrowPeak peaks ENCSR000EWF ChIP-seq EFO:0002067 K562 cell line Homo sapiens YY1-human ENCAB000ANS DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF051ZZR, ENCFF193QAR, ENCFF566NKP 4710456 ENCODE Processing Pipeline c5548561077713c5247041e54aeb05b0 https://www.encodeproject.org/files/ENCFF228AYO/@@download/ENCFF228AYO.bed.gz hg19 released borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF133XFA bigBed narrowPeak peaks ENCSR000EWF ChIP-seq EFO:0002067 K562 cell line Homo sapiens YY1-human ENCAB000ANS DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF228AYO 10822633 ENCODE Processing Pipeline e91c9eb7b914a84fcc9cf7a8341ff6af https://www.encodeproject.org/files/ENCFF133XFA/@@download/ENCFF133XFA.bigBed hg19 released borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF909ZGB bigBed narrowPeak peaks ENCSR000EWF ChIP-seq EFO:0002067 K562 cell line Homo sapiens YY1-human ENCAB000ANS DNA see document see document False 2011-10-29 ENCODE 2 ENCFF211PND 7458676 ENCODE Processing Pipeline 00f76072dea3239f37cc9bc7a42c5134 https://www.encodeproject.org/files/ENCFF909ZGB/@@download/ENCFF909ZGB.bigBed hg19 released borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF291MOZ bed narrowPeak conservative idr thresholded peaks ENCSR000EWF ChIP-seq EFO:0002067 K562 cell line Homo sapiens YY1-human ENCAB000ANS DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF001TDO, ENCFF211PND, ENCFF228AYO, ENCFF899XEM 78222 ENCODE Processing Pipeline 0b12a9c311566321b659238e5df6c40b https://www.encodeproject.org/files/ENCFF291MOZ/@@download/ENCFF291MOZ.bed.gz hg19 released borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF631HBE bigBed narrowPeak optimal idr thresholded peaks ENCSR000EWF ChIP-seq EFO:0002067 K562 cell line Homo sapiens YY1-human ENCAB000ANS DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF557DSM 209978 ENCODE Processing Pipeline 80199852ce19ad0b3a3a2752d2d13fca https://www.encodeproject.org/files/ENCFF631HBE/@@download/ENCFF631HBE.bigBed hg19 released borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF793LFB bam unfiltered alignments ENCSR155KHM ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARNT-human ENCAB511RTZ DNA False 2016-04-21 ENCODE 2 100 ENCFF126ENC, ENCFF198XWC, ENCFF807MUK 5090548005 ENCODE Processing Pipeline 2e2cbb6cfb072bf2e720df5f5b6885a0 https://www.encodeproject.org/files/ENCFF793LFB/@@download/ENCFF793LFB.bam hg19 released mild to moderate bottlenecking ENCFF463GZS bam unfiltered alignments ENCSR155KHM ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARNT-human ENCAB511RTZ DNA False 2016-04-21 ENCODE 1 100 ENCFF109UIV, ENCFF748SHJ, ENCFF807MUK 5958324744 ENCODE Processing Pipeline b72ebe5d3e8f1be8d4b5d0cb223daec7 https://www.encodeproject.org/files/ENCFF463GZS/@@download/ENCFF463GZS.bam hg19 released mild to moderate bottlenecking ENCFF109UIV fastq reads ENCSR155KHM ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARNT-human ENCAB511RTZ DNA False 2016-04-21 ENCODE 1 1 100 paired-ended 1 ENCFF748SHJ 2765280401 Michael Snyder, Stanford fe0fa0fc870f54a9b60aba19dfa639ac SRA:SRR5111203 https://www.encodeproject.org/files/ENCFF109UIV/@@download/ENCFF109UIV.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFF/ released mild to moderate bottlenecking ENCFF126ENC fastq reads ENCSR155KHM ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARNT-human ENCAB511RTZ DNA False 2016-04-21 ENCODE 2 1 100 paired-ended 1 ENCFF198XWC 2378388851 Michael Snyder, Stanford d63304a5063ab9acb129a979ad300974 SRA:SRR5111202 https://www.encodeproject.org/files/ENCFF126ENC/@@download/ENCFF126ENC.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFD/ released mild to moderate bottlenecking ENCFF748SHJ fastq reads ENCSR155KHM ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARNT-human ENCAB511RTZ DNA False 2016-04-21 ENCODE 1 1 100 paired-ended 2 ENCFF109UIV 2807876824 Michael Snyder, Stanford 003ab1f6dccb228e161f1e33383aa803 SRA:SRR5111203 https://www.encodeproject.org/files/ENCFF748SHJ/@@download/ENCFF748SHJ.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFH/ released mild to moderate bottlenecking ENCFF198XWC fastq reads ENCSR155KHM ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARNT-human ENCAB511RTZ DNA False 2016-04-21 ENCODE 2 1 100 paired-ended 2 ENCFF126ENC 2421294524 Michael Snyder, Stanford f529ca99c1dcc0b6daf763ba0b7b28e7 SRA:SRR5111202 https://www.encodeproject.org/files/ENCFF198XWC/@@download/ENCFF198XWC.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFA/ released mild to moderate bottlenecking ENCFF367QVT bam alignments ENCSR155KHM ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARNT-human ENCAB511RTZ DNA False 2016-04-21 ENCODE 1 100 ENCFF109UIV, ENCFF748SHJ, ENCFF807MUK 4809740889 ENCODE Processing Pipeline 1200d62c19cc16131d98b8dd15321260 https://www.encodeproject.org/files/ENCFF367QVT/@@download/ENCFF367QVT.bam hg19 released mild to moderate bottlenecking ENCFF518IYV bam alignments ENCSR155KHM ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARNT-human ENCAB511RTZ DNA False 2016-04-21 ENCODE 2 100 ENCFF126ENC, ENCFF198XWC, ENCFF807MUK 3934006731 ENCODE Processing Pipeline 9fc1d99c720498045a1f4b29616e10b0 https://www.encodeproject.org/files/ENCFF518IYV/@@download/ENCFF518IYV.bam hg19 released mild to moderate bottlenecking ENCFF438DIL bigWig signal p-value ENCSR155KHM ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARNT-human ENCAB511RTZ DNA False 2016-04-21 ENCODE 1 ENCFF367QVT, ENCFF581ZJL 1050159733 ENCODE Processing Pipeline 89486af8ac4c2ae6927ec09533394fdc https://www.encodeproject.org/files/ENCFF438DIL/@@download/ENCFF438DIL.bigWig hg19 released mild to moderate bottlenecking ENCFF413ZGR bigWig fold change over control ENCSR155KHM ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARNT-human ENCAB511RTZ DNA False 2016-04-21 ENCODE 1 ENCFF367QVT, ENCFF581ZJL 1313908816 ENCODE Processing Pipeline e521162ba64e44f725bd3d9e68470edb https://www.encodeproject.org/files/ENCFF413ZGR/@@download/ENCFF413ZGR.bigWig hg19 released mild to moderate bottlenecking ENCFF636HGA bam unfiltered alignments ENCSR155KHM ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARNT-human ENCAB511RTZ DNA False 2016-04-21 ENCODE 2 100 ENCFF126ENC, ENCFF198XWC, ENCFF643CGH 5093911694 ENCODE Processing Pipeline bab1d53cab57e583f2e4021e2fdd18ad https://www.encodeproject.org/files/ENCFF636HGA/@@download/ENCFF636HGA.bam GRCh38 released mild to moderate bottlenecking ENCFF686XTG bam unfiltered alignments ENCSR155KHM ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARNT-human ENCAB511RTZ DNA False 2016-04-21 ENCODE 1 100 ENCFF109UIV, ENCFF643CGH, ENCFF748SHJ 5963440427 ENCODE Processing Pipeline d7d38507cb214009532f414a61c1ccd5 https://www.encodeproject.org/files/ENCFF686XTG/@@download/ENCFF686XTG.bam GRCh38 released mild to moderate bottlenecking ENCFF928JGK bam alignments ENCSR155KHM ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARNT-human ENCAB511RTZ DNA False 2016-04-21 ENCODE 2 100 ENCFF126ENC, ENCFF198XWC, ENCFF643CGH 3935894236 ENCODE Processing Pipeline 7ae2dc10c5beb475000008a4c3a6b322 https://www.encodeproject.org/files/ENCFF928JGK/@@download/ENCFF928JGK.bam GRCh38 released mild to moderate bottlenecking ENCFF108SDD bam alignments ENCSR155KHM ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARNT-human ENCAB511RTZ DNA False 2016-04-21 ENCODE 1 100 ENCFF109UIV, ENCFF643CGH, ENCFF748SHJ 4812397502 ENCODE Processing Pipeline 8ac2a44801bcc9307696b6f7546bdd11 https://www.encodeproject.org/files/ENCFF108SDD/@@download/ENCFF108SDD.bam GRCh38 released mild to moderate bottlenecking ENCFF603ZCF bigWig signal p-value ENCSR155KHM ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARNT-human ENCAB511RTZ DNA False 2016-04-21 ENCODE 1 ENCFF108SDD, ENCFF910IKB 1128969630 ENCODE Processing Pipeline a72d53deae43c593f66ffe448d465dec https://www.encodeproject.org/files/ENCFF603ZCF/@@download/ENCFF603ZCF.bigWig GRCh38 released mild to moderate bottlenecking ENCFF895WHB bigWig signal p-value ENCSR155KHM ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARNT-human ENCAB511RTZ DNA False 2016-04-21 ENCODE 2 ENCFF227IZS, ENCFF928JGK 1106776579 ENCODE Processing Pipeline 562b3b3b392b5f8382c778949dcd5a55 https://www.encodeproject.org/files/ENCFF895WHB/@@download/ENCFF895WHB.bigWig GRCh38 released mild to moderate bottlenecking ENCFF312OBW bigWig signal p-value ENCSR155KHM ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARNT-human ENCAB511RTZ DNA False 2016-04-21 ENCODE 1, 2 ENCFF108SDD, ENCFF227IZS, ENCFF910IKB, ENCFF928JGK 2009411669 ENCODE Processing Pipeline 85c7d000c3a344783ebe84c98242cdd3 https://www.encodeproject.org/files/ENCFF312OBW/@@download/ENCFF312OBW.bigWig GRCh38 released mild to moderate bottlenecking ENCFF329BNT bigWig fold change over control ENCSR155KHM ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARNT-human ENCAB511RTZ DNA False 2016-04-21 ENCODE 1 ENCFF108SDD, ENCFF910IKB 1320936190 ENCODE Processing Pipeline c7eb59baebe762f9b3fdf96e081de5e9 https://www.encodeproject.org/files/ENCFF329BNT/@@download/ENCFF329BNT.bigWig GRCh38 released mild to moderate bottlenecking ENCFF878AJY bigWig fold change over control ENCSR155KHM ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARNT-human ENCAB511RTZ DNA False 2016-04-21 ENCODE 2 ENCFF227IZS, ENCFF928JGK 1142144638 ENCODE Processing Pipeline 05d47de16c124a8fa3243ee8887658ce https://www.encodeproject.org/files/ENCFF878AJY/@@download/ENCFF878AJY.bigWig GRCh38 released mild to moderate bottlenecking ENCFF981KCA bigWig fold change over control ENCSR155KHM ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARNT-human ENCAB511RTZ DNA False 2016-04-21 ENCODE 1, 2 ENCFF108SDD, ENCFF227IZS, ENCFF910IKB, ENCFF928JGK 2156741874 ENCODE Processing Pipeline 25fd8203425d4711ad4baed99ebde67d https://www.encodeproject.org/files/ENCFF981KCA/@@download/ENCFF981KCA.bigWig GRCh38 released mild to moderate bottlenecking ENCFF724DTR bed narrowPeak peaks ENCSR155KHM ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARNT-human ENCAB511RTZ DNA False 2016-04-21 ENCODE 1 ENCFF108SDD, ENCFF910IKB 6901725 ENCODE Processing Pipeline 7c41264509610d4941bd8759027abbf5 https://www.encodeproject.org/files/ENCFF724DTR/@@download/ENCFF724DTR.bed.gz GRCh38 released mild to moderate bottlenecking ENCFF532BNS bed narrowPeak peaks ENCSR155KHM ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARNT-human ENCAB511RTZ DNA False 2016-04-21 ENCODE 2 ENCFF227IZS, ENCFF928JGK 6785115 ENCODE Processing Pipeline 7f9a2ad7d8e3dda51b9785da719d52da https://www.encodeproject.org/files/ENCFF532BNS/@@download/ENCFF532BNS.bed.gz GRCh38 released mild to moderate bottlenecking ENCFF776GYC bed narrowPeak peaks ENCSR155KHM ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARNT-human ENCAB511RTZ DNA False 2016-04-21 ENCODE 1, 2 ENCFF108SDD, ENCFF227IZS, ENCFF910IKB, ENCFF928JGK 7247466 ENCODE Processing Pipeline cea8c8b2355862e17df25703e2c6b959 https://www.encodeproject.org/files/ENCFF776GYC/@@download/ENCFF776GYC.bed.gz GRCh38 released mild to moderate bottlenecking ENCFF169AAM bigBed narrowPeak peaks ENCSR155KHM ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARNT-human ENCAB511RTZ DNA False 2016-04-21 ENCODE 1 ENCFF724DTR 13139138 ENCODE Processing Pipeline 689cfef6ed1cc827f565751fb928f67f https://www.encodeproject.org/files/ENCFF169AAM/@@download/ENCFF169AAM.bigBed GRCh38 released mild to moderate bottlenecking ENCFF268ESV bigBed narrowPeak peaks ENCSR155KHM ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARNT-human ENCAB511RTZ DNA False 2016-04-21 ENCODE 2 ENCFF532BNS 13148851 ENCODE Processing Pipeline 7004fc8d0ad2b6d37ce50d0e79dfdcb2 https://www.encodeproject.org/files/ENCFF268ESV/@@download/ENCFF268ESV.bigBed GRCh38 released mild to moderate bottlenecking ENCFF383PUK bigBed narrowPeak peaks ENCSR155KHM ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARNT-human ENCAB511RTZ DNA False 2016-04-21 ENCODE 1, 2 ENCFF776GYC 12967854 ENCODE Processing Pipeline 7b3ac5df45a91e668b6c7d727c792a9e https://www.encodeproject.org/files/ENCFF383PUK/@@download/ENCFF383PUK.bigBed GRCh38 released mild to moderate bottlenecking ENCFF805MAQ bed narrowPeak conservative idr thresholded peaks ENCSR155KHM ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARNT-human ENCAB511RTZ DNA False 2016-04-21 ENCODE 1, 2 ENCFF419RSJ, ENCFF532BNS, ENCFF724DTR, ENCFF776GYC 148058 ENCODE Processing Pipeline ac2f0694d1ab02bcf6beefcc7853aea6 https://www.encodeproject.org/files/ENCFF805MAQ/@@download/ENCFF805MAQ.bed.gz GRCh38 released mild to moderate bottlenecking ENCFF972IWS bigBed narrowPeak conservative idr thresholded peaks ENCSR155KHM ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARNT-human ENCAB511RTZ DNA False 2016-04-21 ENCODE 1, 2 ENCFF805MAQ 365802 ENCODE Processing Pipeline dd0b4f5e7b4d599684abd7dd6c572aba https://www.encodeproject.org/files/ENCFF972IWS/@@download/ENCFF972IWS.bigBed GRCh38 released mild to moderate bottlenecking ENCFF447FIO bed narrowPeak optimal idr thresholded peaks ENCSR155KHM ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARNT-human ENCAB511RTZ DNA False 2016-04-21 ENCODE 1, 2 ENCFF419RSJ, ENCFF532BNS, ENCFF724DTR, ENCFF776GYC 216862 ENCODE Processing Pipeline 94c5616daeacc3b7d0b525da033c9f7a https://www.encodeproject.org/files/ENCFF447FIO/@@download/ENCFF447FIO.bed.gz GRCh38 released mild to moderate bottlenecking ENCFF837SJZ bigBed narrowPeak optimal idr thresholded peaks ENCSR155KHM ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARNT-human ENCAB511RTZ DNA False 2016-04-21 ENCODE 1, 2 ENCFF447FIO 480874 ENCODE Processing Pipeline a0b0023fb0e05664194bc16634ddbe0a https://www.encodeproject.org/files/ENCFF837SJZ/@@download/ENCFF837SJZ.bigBed GRCh38 released mild to moderate bottlenecking ENCFF011UZZ bed narrowPeak peaks ENCSR155KHM ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARNT-human ENCAB511RTZ DNA False 2016-04-21 ENCODE 1 ENCFF367QVT, ENCFF581ZJL 6897052 ENCODE Processing Pipeline 75f43cabef1cec46da521df4ee68fd85 https://www.encodeproject.org/files/ENCFF011UZZ/@@download/ENCFF011UZZ.bed.gz hg19 released mild to moderate bottlenecking ENCFF071HZE bed narrowPeak peaks ENCSR155KHM ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARNT-human ENCAB511RTZ DNA False 2016-04-21 ENCODE 1, 2 ENCFF051LWI, ENCFF367QVT, ENCFF518IYV, ENCFF581ZJL 7246665 ENCODE Processing Pipeline 8d61e3167b86dd42914539aae5dd80fe https://www.encodeproject.org/files/ENCFF071HZE/@@download/ENCFF071HZE.bed.gz hg19 released mild to moderate bottlenecking ENCFF706IXI bigBed narrowPeak peaks ENCSR155KHM ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARNT-human ENCAB511RTZ DNA False 2016-04-21 ENCODE 1 ENCFF011UZZ 13127658 ENCODE Processing Pipeline 7881e378c8657f22ba21af530a4f82dd https://www.encodeproject.org/files/ENCFF706IXI/@@download/ENCFF706IXI.bigBed hg19 released mild to moderate bottlenecking ENCFF546RMM bigWig signal p-value ENCSR155KHM ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARNT-human ENCAB511RTZ DNA False 2016-04-21 ENCODE 2 ENCFF051LWI, ENCFF518IYV 1104447966 ENCODE Processing Pipeline 2df040b0a81e342b14787b4f5ef5c849 https://www.encodeproject.org/files/ENCFF546RMM/@@download/ENCFF546RMM.bigWig hg19 released mild to moderate bottlenecking ENCFF755QIR bigWig signal p-value ENCSR155KHM ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARNT-human ENCAB511RTZ DNA False 2016-04-21 ENCODE 1, 2 ENCFF051LWI, ENCFF367QVT, ENCFF518IYV, ENCFF581ZJL 2081404664 ENCODE Processing Pipeline f31a1c35a227bf8d5e381fa792d8d7e1 https://www.encodeproject.org/files/ENCFF755QIR/@@download/ENCFF755QIR.bigWig hg19 released mild to moderate bottlenecking ENCFF459CML bigBed narrowPeak peaks ENCSR155KHM ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARNT-human ENCAB511RTZ DNA False 2016-04-21 ENCODE 2 ENCFF652WXC 13134097 ENCODE Processing Pipeline aa468e2efa67c678899c684a1de3a316 https://www.encodeproject.org/files/ENCFF459CML/@@download/ENCFF459CML.bigBed hg19 released mild to moderate bottlenecking ENCFF521JOW bed narrowPeak conservative idr thresholded peaks ENCSR155KHM ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARNT-human ENCAB511RTZ DNA False 2016-04-21 ENCODE 1, 2 ENCFF001TDO, ENCFF011UZZ, ENCFF071HZE, ENCFF652WXC 146916 ENCODE Processing Pipeline e6a7061337af685721735a2231aaa57e https://www.encodeproject.org/files/ENCFF521JOW/@@download/ENCFF521JOW.bed.gz hg19 released mild to moderate bottlenecking ENCFF186OCZ bigWig fold change over control ENCSR155KHM ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARNT-human ENCAB511RTZ DNA False 2016-04-21 ENCODE 1, 2 ENCFF051LWI, ENCFF367QVT, ENCFF518IYV, ENCFF581ZJL 2179445874 ENCODE Processing Pipeline 01fb6148e4ebbbb49e1c4e38bf82e1ea https://www.encodeproject.org/files/ENCFF186OCZ/@@download/ENCFF186OCZ.bigWig hg19 released mild to moderate bottlenecking ENCFF746EXU bigWig fold change over control ENCSR155KHM ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARNT-human ENCAB511RTZ DNA False 2016-04-21 ENCODE 2 ENCFF051LWI, ENCFF518IYV 1121988294 ENCODE Processing Pipeline 6da7d5784448bfbb827f35453ce1910d https://www.encodeproject.org/files/ENCFF746EXU/@@download/ENCFF746EXU.bigWig hg19 released mild to moderate bottlenecking ENCFF652WXC bed narrowPeak peaks ENCSR155KHM ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARNT-human ENCAB511RTZ DNA False 2016-04-21 ENCODE 2 ENCFF051LWI, ENCFF518IYV 6775311 ENCODE Processing Pipeline 255864953a6693c48e10c5c5811564d7 https://www.encodeproject.org/files/ENCFF652WXC/@@download/ENCFF652WXC.bed.gz hg19 released mild to moderate bottlenecking ENCFF183AJH bigBed narrowPeak peaks ENCSR155KHM ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARNT-human ENCAB511RTZ DNA False 2016-04-21 ENCODE 1, 2 ENCFF071HZE 12959079 ENCODE Processing Pipeline 7ef3e03361e5284d0f2a4f251f517bc6 https://www.encodeproject.org/files/ENCFF183AJH/@@download/ENCFF183AJH.bigBed hg19 released mild to moderate bottlenecking ENCFF507MGL bed narrowPeak optimal idr thresholded peaks ENCSR155KHM ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARNT-human ENCAB511RTZ DNA False 2016-04-21 ENCODE 1, 2 ENCFF001TDO, ENCFF011UZZ, ENCFF071HZE, ENCFF652WXC 214239 ENCODE Processing Pipeline 5840c9b0b65a89375f82d3cdf94ec1f5 https://www.encodeproject.org/files/ENCFF507MGL/@@download/ENCFF507MGL.bed.gz hg19 released mild to moderate bottlenecking ENCFF322VPZ bigBed narrowPeak conservative idr thresholded peaks ENCSR155KHM ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARNT-human ENCAB511RTZ DNA False 2016-04-21 ENCODE 1, 2 ENCFF521JOW 361865 ENCODE Processing Pipeline a3a5d9b66d866b3f219ac2ee9f343eff https://www.encodeproject.org/files/ENCFF322VPZ/@@download/ENCFF322VPZ.bigBed hg19 released mild to moderate bottlenecking ENCFF504CGI bigBed narrowPeak optimal idr thresholded peaks ENCSR155KHM ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARNT-human ENCAB511RTZ DNA False 2016-04-21 ENCODE 1, 2 ENCFF507MGL 475020 ENCODE Processing Pipeline 81bf08a0a5ca7bd30c8141fc3e1aaf49 https://www.encodeproject.org/files/ENCFF504CGI/@@download/ENCFF504CGI.bigBed hg19 released mild to moderate bottlenecking ENCFF000BZX bigBed broadPeak peaks ENCSR000ATY ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOR1-human ENCAB000AIY, ENCAB805KAO DNA see document see document False 2012-08-06 ENCODE ENCFF001SZT 348687 Bradley Bernstein, Broad 465db0b9cbd1052eb580b9011ed1d7f1 https://www.encodeproject.org/files/ENCFF000BZX/@@download/ENCFF000BZX.bigBed hg19 released inconsistent platforms, low read length missing raw data in replicate ENCFF000BZY bam alignments ENCSR000ATY ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOR1-human ENCAB000AIY, ENCAB805KAO DNA see document see document False 2012-08-06 ENCODE 1 ENCFF000CAI 1128848624 Bradley Bernstein, Broad d09f9c4cf124705b1cd48ae69168bc1e https://www.encodeproject.org/files/ENCFF000BZY/@@download/ENCFF000BZY.bam hg19 released inconsistent platforms, low read length missing raw data in replicate ENCFF000BZZ bigWig signal ENCSR000ATY ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOR1-human ENCAB000AIY, ENCAB805KAO DNA see document see document False 2012-08-06 ENCODE 182898401 Bradley Bernstein, Broad 0bf1315d4b001d5b6a5938204a1d38c9 https://www.encodeproject.org/files/ENCFF000BZZ/@@download/ENCFF000BZZ.bigWig hg19 released inconsistent platforms, low read length missing raw data in replicate, missing derived_from ENCFF000CAI fastq reads ENCSR000ATY ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOR1-human ENCAB000AIY, ENCAB805KAO DNA see document see document False 2012-08-06 ENCODE 1 1 36 single-ended 1240465203 Bradley Bernstein, Broad 6edf7c991c24b05d86914541e680b96e https://www.encodeproject.org/files/ENCFF000CAI/@@download/ENCFF000CAI.fastq.gz Illumina HiSeq 2000 /files/ENCFF000BWK/ released inconsistent platforms, low read length missing raw data in replicate ENCFF001SZT bed broadPeak peaks ENCSR000ATY ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOR1-human ENCAB000AIY, ENCAB805KAO DNA see document see document False 2012-08-06 ENCODE 178678 Bradley Bernstein, Broad 65da1e9239562b7723b8a6c02897bbba https://www.encodeproject.org/files/ENCFF001SZT/@@download/ENCFF001SZT.bed.gz hg19 released inconsistent platforms, low read length missing raw data in replicate, missing derived_from ENCFF000YYQ bam alignments ENCSR000EWD ChIP-seq EFO:0002067 K562 cell line Homo sapiens SETDB1-human ENCAB000AKP DNA see document see document False 2012-05-14 ENCODE 1 ENCFF000YZC 735403175 Peggy Farnham, USC f6af117cd3a31533b2f3e663a038ef52 https://www.encodeproject.org/files/ENCFF000YYQ/@@download/ENCFF000YYQ.bam hg19 archived low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF000YYS bigBed narrowPeak peaks ENCSR000EWD ChIP-seq EFO:0002067 K562 cell line Homo sapiens SETDB1-human ENCAB000AKP DNA see document see document False 2012-05-14 ENCODE ENCFF001VOP 144319 Peggy Farnham, USC c61460b8ee8ffbccbc47793e777b8d24 https://www.encodeproject.org/files/ENCFF000YYS/@@download/ENCFF000YYS.bigBed hg19 archived low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF000YYT bam alignments ENCSR000EWD ChIP-seq EFO:0002067 K562 cell line Homo sapiens SETDB1-human ENCAB000AKP DNA see document see document False 2012-05-14 ENCODE 2 ENCFF000YZB 829587215 Peggy Farnham, USC de153f0652491963bfd7bbcb4084fec7 https://www.encodeproject.org/files/ENCFF000YYT/@@download/ENCFF000YYT.bam hg19 archived low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF000YYU bigWig signal ENCSR000EWD ChIP-seq EFO:0002067 K562 cell line Homo sapiens SETDB1-human ENCAB000AKP DNA see document see document False 2012-05-14 ENCODE 409645287 Peggy Farnham, USC 8bc88b0248b4b09bd70f78003967b6c7 https://www.encodeproject.org/files/ENCFF000YYU/@@download/ENCFF000YYU.bigWig hg19 archived low read depth, mild to moderate bottlenecking biological replicates with identical biosample, missing derived_from insufficient read length, insufficient read depth ENCFF000YZB fastq reads ENCSR000EWD ChIP-seq EFO:0002067 K562 cell line Homo sapiens SETDB1-human ENCAB000AKP DNA see document see document False 2012-05-14 ENCODE 2 1 32 single-ended 618070415 Peggy Farnham, USC bb37596bcf734e679432d00c7288f220 https://www.encodeproject.org/files/ENCFF000YZB/@@download/ENCFF000YZB.fastq.gz Illumina Genome Analyzer /files/ENCFF000VEK/ released low read depth, inconsistent control read length, mild to moderate bottlenecking biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF000YZC fastq reads ENCSR000EWD ChIP-seq EFO:0002067 K562 cell line Homo sapiens SETDB1-human ENCAB000AKP DNA see document see document False 2012-05-14 ENCODE 1 1 32 single-ended 539002203 Peggy Farnham, USC 186b16c6759852eeccbe0ebefe8db856 https://www.encodeproject.org/files/ENCFF000YZC/@@download/ENCFF000YZC.fastq.gz Illumina Genome Analyzer /files/ENCFF000VEK/ released low read depth, inconsistent control read length, mild to moderate bottlenecking biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF001VOP bed narrowPeak peaks ENCSR000EWD ChIP-seq EFO:0002067 K562 cell line Homo sapiens SETDB1-human ENCAB000AKP DNA see document see document False 2012-05-14 ENCODE 29015 Peggy Farnham, USC 74ed6582b9df786ac592b77a0b22cf1d https://www.encodeproject.org/files/ENCFF001VOP/@@download/ENCFF001VOP.bed.gz hg19 archived low read depth, mild to moderate bottlenecking biological replicates with identical biosample, missing derived_from insufficient read length, insufficient read depth ENCFF002CXX bed narrowPeak optimal idr thresholded peaks ENCSR000EWD ChIP-seq EFO:0002067 K562 cell line Homo sapiens SETDB1-human ENCAB000AKP DNA see document see document False 2012-05-14 ENCODE 75057 ENCODE Consortium Analysis Working Group 3ad3b57662ab561f996e58a8c8bbd82b https://www.encodeproject.org/files/ENCFF002CXX/@@download/ENCFF002CXX.bed.gz hg19 archived low read depth, mild to moderate bottlenecking biological replicates with identical biosample, missing derived_from insufficient read length, insufficient read depth ENCFF173RSL bigBed narrowPeak optimal idr thresholded peaks ENCSR000EWD ChIP-seq EFO:0002067 K562 cell line Homo sapiens SETDB1-human ENCAB000AKP DNA see document see document False 2012-05-14 ENCODE ENCFF002CXX 270914 ENCODE Consortium 6787f2dddac0dd4037f5b21a2efdc3e6 https://www.encodeproject.org/files/ENCFF173RSL/@@download/ENCFF173RSL.bigBed hg19 archived low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF150YTA bam unfiltered alignments ENCSR000EWD ChIP-seq EFO:0002067 K562 cell line Homo sapiens SETDB1-human ENCAB000AKP DNA see document see document False 2012-05-14 ENCODE 1 32 ENCFF000YZC, ENCFF643CGH 738647323 ENCODE Processing Pipeline 4281c8e355c89af066b3c20242059d77 https://www.encodeproject.org/files/ENCFF150YTA/@@download/ENCFF150YTA.bam GRCh38 released low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF761GRW bam unfiltered alignments ENCSR000EWD ChIP-seq EFO:0002067 K562 cell line Homo sapiens SETDB1-human ENCAB000AKP DNA see document see document False 2012-05-14 ENCODE 2 32 ENCFF000YZB, ENCFF643CGH 834249179 ENCODE Processing Pipeline 941672dfd8f87d7efe51ed81b6305391 https://www.encodeproject.org/files/ENCFF761GRW/@@download/ENCFF761GRW.bam GRCh38 released low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF829CHZ bam alignments ENCSR000EWD ChIP-seq EFO:0002067 K562 cell line Homo sapiens SETDB1-human ENCAB000AKP DNA see document see document False 2012-05-14 ENCODE 1 32 ENCFF000YZC, ENCFF643CGH 419881009 ENCODE Processing Pipeline 8535cea239154c7cfebca11f71004a11 https://www.encodeproject.org/files/ENCFF829CHZ/@@download/ENCFF829CHZ.bam GRCh38 released low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF765XRJ bam alignments ENCSR000EWD ChIP-seq EFO:0002067 K562 cell line Homo sapiens SETDB1-human ENCAB000AKP DNA see document see document False 2012-05-14 ENCODE 2 32 ENCFF000YZB, ENCFF643CGH 454466289 ENCODE Processing Pipeline d7bd2ed9d618cd9457f20dce07c4ab8f https://www.encodeproject.org/files/ENCFF765XRJ/@@download/ENCFF765XRJ.bam GRCh38 released low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF183ZKB bam alignments ENCSR000EWD ChIP-seq EFO:0002067 K562 cell line Homo sapiens SETDB1-human ENCAB000AKP DNA see document see document False 2012-05-14 ENCODE 2 32 ENCFF000YZB, ENCFF807MUK 454736444 ENCODE Processing Pipeline e4adf216018bea1cd207852aae52364b https://www.encodeproject.org/files/ENCFF183ZKB/@@download/ENCFF183ZKB.bam hg19 released low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF592RJC bam alignments ENCSR000EWD ChIP-seq EFO:0002067 K562 cell line Homo sapiens SETDB1-human ENCAB000AKP DNA see document see document False 2012-05-14 ENCODE 1 32 ENCFF000YZC, ENCFF807MUK 420127588 ENCODE Processing Pipeline 40bbf7baff931822ddac91f7770e616e https://www.encodeproject.org/files/ENCFF592RJC/@@download/ENCFF592RJC.bam hg19 released low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF128TNZ bam unfiltered alignments ENCSR000EWD ChIP-seq EFO:0002067 K562 cell line Homo sapiens SETDB1-human ENCAB000AKP DNA see document see document False 2012-05-14 ENCODE 1 32 ENCFF000YZC, ENCFF807MUK 736572350 ENCODE Processing Pipeline d052c33e013cc71ad17a3f66d531c421 https://www.encodeproject.org/files/ENCFF128TNZ/@@download/ENCFF128TNZ.bam hg19 released low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF064XPA bam unfiltered alignments ENCSR000EWD ChIP-seq EFO:0002067 K562 cell line Homo sapiens SETDB1-human ENCAB000AKP DNA see document see document False 2012-05-14 ENCODE 2 32 ENCFF000YZB, ENCFF807MUK 831162811 ENCODE Processing Pipeline 1b914f07d3daabe7d2f5ca1458953004 https://www.encodeproject.org/files/ENCFF064XPA/@@download/ENCFF064XPA.bam hg19 released low read depth, mild to moderate bottlenecking biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF000ZBS bam alignments ENCSR000DOD ChIP-seq EFO:0002067 K562 cell line Homo sapiens GTF3C2-human ENCAB000ALX DNA see document see document False 2011-10-29 ENCODE 1 ENCFF000ZBY 207267628 Kevin Struhl, HMS ae6c3d24e10de7064ec789f4a5bcafa5 https://www.encodeproject.org/files/ENCFF000ZBS/@@download/ENCFF000ZBS.bam hg19 released biological replicates with identical biosample insufficient read length ENCFF000ZBT bam alignments ENCSR000DOD ChIP-seq EFO:0002067 K562 cell line Homo sapiens GTF3C2-human ENCAB000ALX DNA see document see document False 2011-10-29 ENCODE 2 ENCFF000ZCN 169163426 Kevin Struhl, HMS 9f5bae3aee3e27453c9d0c1819d41737 https://www.encodeproject.org/files/ENCFF000ZBT/@@download/ENCFF000ZBT.bam hg19 released biological replicates with identical biosample insufficient read length ENCFF000ZBU bam alignments ENCSR000DOD ChIP-seq EFO:0002067 K562 cell line Homo sapiens GTF3C2-human ENCAB000ALX DNA see document see document False 2011-10-29 ENCODE 3 ENCFF000ZCO 231618007 Kevin Struhl, HMS df10f95736f0ae1e9958562aa2aad357 https://www.encodeproject.org/files/ENCFF000ZBU/@@download/ENCFF000ZBU.bam hg19 released biological replicates with identical biosample insufficient read length ENCFF000ZBV bigBed narrowPeak peaks ENCSR000DOD ChIP-seq EFO:0002067 K562 cell line Homo sapiens GTF3C2-human ENCAB000ALX DNA see document see document False 2011-10-29 ENCODE ENCFF001VPD 168022 Kevin Struhl, HMS cc59bfb5f520c29e0b8d01c49290dbc6 https://www.encodeproject.org/files/ENCFF000ZBV/@@download/ENCFF000ZBV.bigBed hg19 released biological replicates with identical biosample insufficient read length ENCFF000ZBW bigWig signal ENCSR000DOD ChIP-seq EFO:0002067 K562 cell line Homo sapiens GTF3C2-human ENCAB000ALX DNA see document see document False 2011-10-29 ENCODE 319042695 Kevin Struhl, HMS 5404e1530a6972064128e6b1f567581f https://www.encodeproject.org/files/ENCFF000ZBW/@@download/ENCFF000ZBW.bigWig hg19 released biological replicates with identical biosample, missing derived_from insufficient read length ENCFF000ZBY fastq reads ENCSR000DOD ChIP-seq EFO:0002067 K562 cell line Homo sapiens GTF3C2-human ENCAB000ALX DNA see document see document False 2011-10-29 ENCODE 1 1 27 single-ended 183847341 Kevin Struhl, HMS 7ab1b5f694ac75061c15160c50f41c6a https://www.encodeproject.org/files/ENCFF000ZBY/@@download/ENCFF000ZBY.fastq.gz Illumina Genome Analyzer released biological replicates with identical biosample insufficient read length, missing controlled_by ENCFF000ZCN fastq reads ENCSR000DOD ChIP-seq EFO:0002067 K562 cell line Homo sapiens GTF3C2-human ENCAB000ALX DNA see document see document False 2011-10-29 ENCODE 2 1 27 single-ended 155879406 Kevin Struhl, HMS bb65b70ea1af2655d9a47d671c947d72 https://www.encodeproject.org/files/ENCFF000ZCN/@@download/ENCFF000ZCN.fastq.gz Illumina Genome Analyzer released biological replicates with identical biosample insufficient read length, missing controlled_by ENCFF000ZCO fastq reads ENCSR000DOD ChIP-seq EFO:0002067 K562 cell line Homo sapiens GTF3C2-human ENCAB000ALX DNA see document see document False 2011-10-29 ENCODE 3 1 27 single-ended 202449135 Kevin Struhl, HMS 733f4f69824a0c43168d4b241d1923cd https://www.encodeproject.org/files/ENCFF000ZCO/@@download/ENCFF000ZCO.fastq.gz Illumina Genome Analyzer released biological replicates with identical biosample insufficient read length, missing controlled_by ENCFF001VPD bed narrowPeak peaks ENCSR000DOD ChIP-seq EFO:0002067 K562 cell line Homo sapiens GTF3C2-human ENCAB000ALX DNA see document see document False 2011-10-29 ENCODE 34579 Kevin Struhl, HMS 0255769bf5158424ac1aa0f59759db60 https://www.encodeproject.org/files/ENCFF001VPD/@@download/ENCFF001VPD.bed.gz hg19 released biological replicates with identical biosample, missing derived_from insufficient read length ENCFF002CYL bed narrowPeak optimal idr thresholded peaks ENCSR000DOD ChIP-seq EFO:0002067 K562 cell line Homo sapiens GTF3C2-human ENCAB000ALX DNA see document see document False 2011-10-29 ENCODE 38890 ENCODE Consortium Analysis Working Group 7838d8b05a9dbfdedb09c34d31bbe8e8 https://www.encodeproject.org/files/ENCFF002CYL/@@download/ENCFF002CYL.bed.gz hg19 released biological replicates with identical biosample, missing derived_from insufficient read length ENCFF943SAN bigBed narrowPeak optimal idr thresholded peaks ENCSR000DOD ChIP-seq EFO:0002067 K562 cell line Homo sapiens GTF3C2-human ENCAB000ALX DNA see document see document False 2011-10-29 ENCODE ENCFF002CYL 138453 ENCODE Consortium ea157760025e9219b1f02c254aa89842 https://www.encodeproject.org/files/ENCFF943SAN/@@download/ENCFF943SAN.bigBed hg19 released biological replicates with identical biosample insufficient read length ENCFF000ZDD bam alignments ENCSR000FAC ChIP-seq EFO:0002067 K562 cell line Homo sapiens XRCC4-human ENCAB000AMK DNA see document see document False 2011-10-29 ENCODE 1 ENCFF000ZDH 407128294 Sherman Weissman, Yale f75a8e54e5900eddf3668e39692b5e4c https://www.encodeproject.org/files/ENCFF000ZDD/@@download/ENCFF000ZDD.bam hg19 released biological replicates with identical biosample insufficient read length ENCFF000ZDE bam alignments ENCSR000FAC ChIP-seq EFO:0002067 K562 cell line Homo sapiens XRCC4-human ENCAB000AMK DNA see document see document False 2011-10-29 ENCODE 2 ENCFF000ZDI 371741688 Sherman Weissman, Yale df7ba9aa03c568e194c95d036fbc0db1 https://www.encodeproject.org/files/ENCFF000ZDE/@@download/ENCFF000ZDE.bam hg19 released biological replicates with identical biosample insufficient read length ENCFF000ZDF bigBed narrowPeak peaks ENCSR000FAC ChIP-seq EFO:0002067 K562 cell line Homo sapiens XRCC4-human ENCAB000AMK DNA see document see document False 2011-10-29 ENCODE ENCFF001VPI 28060 Sherman Weissman, Yale 453c7240d13b01353aa7c0e4464f282f https://www.encodeproject.org/files/ENCFF000ZDF/@@download/ENCFF000ZDF.bigBed hg19 released biological replicates with identical biosample insufficient read length ENCFF000ZDG bigWig signal ENCSR000FAC ChIP-seq EFO:0002067 K562 cell line Homo sapiens XRCC4-human ENCAB000AMK DNA see document see document False 2011-10-29 ENCODE 335017899 Sherman Weissman, Yale 0a611e268dcacebe512fef00439427ca https://www.encodeproject.org/files/ENCFF000ZDG/@@download/ENCFF000ZDG.bigWig hg19 released biological replicates with identical biosample, missing derived_from insufficient read length ENCFF000ZDH fastq reads ENCSR000FAC ChIP-seq EFO:0002067 K562 cell line Homo sapiens XRCC4-human ENCAB000AMK DNA see document see document False 2011-10-29 ENCODE 1 1 34 single-ended 325668510 Sherman Weissman, Yale e35d1233fed41f798997450d218676f0 https://www.encodeproject.org/files/ENCFF000ZDH/@@download/ENCFF000ZDH.fastq.gz Illumina Genome Analyzer released biological replicates with identical biosample insufficient read length, missing controlled_by ENCFF000ZDI fastq reads ENCSR000FAC ChIP-seq EFO:0002067 K562 cell line Homo sapiens XRCC4-human ENCAB000AMK DNA see document see document False 2011-10-29 ENCODE 2 1 34 single-ended 297870967 Sherman Weissman, Yale 72bfc652501dee2b1131a022449cd285 https://www.encodeproject.org/files/ENCFF000ZDI/@@download/ENCFF000ZDI.fastq.gz Illumina Genome Analyzer released biological replicates with identical biosample insufficient read length, missing controlled_by ENCFF001VPI bed narrowPeak peaks ENCSR000FAC ChIP-seq EFO:0002067 K562 cell line Homo sapiens XRCC4-human ENCAB000AMK DNA see document see document False 2011-10-29 ENCODE 536 Sherman Weissman, Yale 53b582d7e33cebdad006cc70b1648caf https://www.encodeproject.org/files/ENCFF001VPI/@@download/ENCFF001VPI.bed.gz hg19 released biological replicates with identical biosample, missing derived_from insufficient read length ENCFF000YPH fastq reads ENCSR000FBC ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour STAT2-human ENCAB000ALG DNA see document see document False 2011-10-29 ENCODE 1 1 27 single-ended 280537112 Sherman Weissman, Yale 6f60cb47cc4d2c33e04387ed475c7fdb https://www.encodeproject.org/files/ENCFF000YPH/@@download/ENCFF000YPH.fastq.gz Illumina Genome Analyzer /files/ENCFF000YPF/ released control low read depth, inconsistent control read length biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth ENCFF000YPK fastq reads ENCSR000FBC ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour STAT2-human ENCAB000ALG DNA see document see document False 2011-10-29 ENCODE 2 1 27 single-ended 537802166 Sherman Weissman, Yale 3de3f6afc529871584b5c44fc84eb26b https://www.encodeproject.org/files/ENCFF000YPK/@@download/ENCFF000YPK.fastq.gz Illumina Genome Analyzer /files/ENCFF000YPF/ released control low read depth, inconsistent control read length biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth ENCFF000ZAM bam alignments ENCSR000FBC ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour STAT2-human ENCAB000ALG DNA see document see document False 2011-10-29 ENCODE 1 ENCFF000YPH 360836454 Sherman Weissman, Yale b809a85d8ad1f877b58cf78bf76d4889 https://www.encodeproject.org/files/ENCFF000ZAM/@@download/ENCFF000ZAM.bam hg19 archived control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth ENCFF000ZAN bam alignments ENCSR000FBC ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour STAT2-human ENCAB000ALG DNA see document see document False 2011-10-29 ENCODE 2 ENCFF000YPK 708776747 Sherman Weissman, Yale 91be16be56b1e92f1eec0fd4a8c0218b https://www.encodeproject.org/files/ENCFF000ZAN/@@download/ENCFF000ZAN.bam hg19 archived control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth ENCFF000ZAO bigBed narrowPeak peaks ENCSR000FBC ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour STAT2-human ENCAB000ALG DNA see document see document False 2011-10-29 ENCODE ENCFF001VOY 108717 Sherman Weissman, Yale a28f045ef5463ab6b0f49aebe035c57d https://www.encodeproject.org/files/ENCFF000ZAO/@@download/ENCFF000ZAO.bigBed hg19 archived control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth ENCFF000ZAP bigWig signal ENCSR000FBC ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour STAT2-human ENCAB000ALG DNA see document see document False 2011-10-29 ENCODE 350456128 Sherman Weissman, Yale 4916b18ac76020a13a33e5687550f013 https://www.encodeproject.org/files/ENCFF000ZAP/@@download/ENCFF000ZAP.bigWig hg19 archived control low read depth biological replicates with identical biosample, missing derived_from insufficient read length, insufficient read depth extremely low read depth ENCFF001VOY bed narrowPeak peaks ENCSR000FBC ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour STAT2-human ENCAB000ALG DNA see document see document False 2011-10-29 ENCODE 16103 Sherman Weissman, Yale d1811f74462e9d25becbae05f7872427 https://www.encodeproject.org/files/ENCFF001VOY/@@download/ENCFF001VOY.bed.gz hg19 archived control low read depth biological replicates with identical biosample, missing derived_from insufficient read length, insufficient read depth extremely low read depth ENCFF002CYG bed narrowPeak optimal idr thresholded peaks ENCSR000FBC ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour STAT2-human ENCAB000ALG DNA see document see document False 2011-10-29 ENCODE 52027 ENCODE Consortium Analysis Working Group 536662a0526af993e9407b8b17b37312 https://www.encodeproject.org/files/ENCFF002CYG/@@download/ENCFF002CYG.bed.gz hg19 archived control low read depth biological replicates with identical biosample, missing derived_from insufficient read length, insufficient read depth extremely low read depth ENCFF319BQS bigBed narrowPeak optimal idr thresholded peaks ENCSR000FBC ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour STAT2-human ENCAB000ALG DNA see document see document False 2011-10-29 ENCODE ENCFF002CYG 206260 ENCODE Consortium 5db70dbd180e9209b9cec8c11181353c https://www.encodeproject.org/files/ENCFF319BQS/@@download/ENCFF319BQS.bigBed hg19 archived control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth ENCFF280WMP bam unfiltered alignments ENCSR000FBC ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour STAT2-human ENCAB000ALG DNA see document see document False 2011-10-29 ENCODE 1 27 ENCFF000YPH, ENCFF643CGH 362356559 ENCODE Processing Pipeline 3116955384b8aa8eb90818862c416e6b https://www.encodeproject.org/files/ENCFF280WMP/@@download/ENCFF280WMP.bam GRCh38 released control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth ENCFF067AEJ bam unfiltered alignments ENCSR000FBC ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour STAT2-human ENCAB000ALG DNA see document see document False 2011-10-29 ENCODE 1 27 ENCFF000YPH, ENCFF807MUK 361360090 ENCODE Processing Pipeline ac15c4454da14f689c504a8650889b56 https://www.encodeproject.org/files/ENCFF067AEJ/@@download/ENCFF067AEJ.bam hg19 released control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth ENCFF969WVY bam alignments ENCSR000FBC ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour STAT2-human ENCAB000ALG DNA see document see document False 2011-10-29 ENCODE 1 27 ENCFF000YPH, ENCFF807MUK 208451055 ENCODE Processing Pipeline f1da909a9bf5e3d226a1e2fbbd5c83e0 https://www.encodeproject.org/files/ENCFF969WVY/@@download/ENCFF969WVY.bam hg19 released control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth ENCFF951ITB bam alignments ENCSR000FBC ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour STAT2-human ENCAB000ALG DNA see document see document False 2011-10-29 ENCODE 1 27 ENCFF000YPH, ENCFF643CGH 208193514 ENCODE Processing Pipeline f27dfde5d70ace56e3cfbfb08b2e40c6 https://www.encodeproject.org/files/ENCFF951ITB/@@download/ENCFF951ITB.bam GRCh38 released control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth ENCFF582BYX bam unfiltered alignments ENCSR000FBC ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour STAT2-human ENCAB000ALG DNA see document see document False 2011-10-29 ENCODE 2 27 ENCFF000YPK, ENCFF807MUK 709353123 ENCODE Processing Pipeline 43a54580e490b4596094d88ae4bac07f https://www.encodeproject.org/files/ENCFF582BYX/@@download/ENCFF582BYX.bam hg19 released control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth ENCFF900YNG bam alignments ENCSR000FBC ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour STAT2-human ENCAB000ALG DNA see document see document False 2011-10-29 ENCODE 2 27 ENCFF000YPK, ENCFF807MUK 315119018 ENCODE Processing Pipeline 02373f17434d2a00f34ff7d76d5d436b https://www.encodeproject.org/files/ENCFF900YNG/@@download/ENCFF900YNG.bam hg19 released control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth ENCFF876GQO bam alignments ENCSR000FBC ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour STAT2-human ENCAB000ALG DNA see document see document False 2011-10-29 ENCODE 2 27 ENCFF000YPK, ENCFF643CGH 314736574 ENCODE Processing Pipeline d3bb42653dffa200637fb82f4ecf5e63 https://www.encodeproject.org/files/ENCFF876GQO/@@download/ENCFF876GQO.bam GRCh38 released control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth ENCFF693OEL bam unfiltered alignments ENCSR000FBC ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour STAT2-human ENCAB000ALG DNA see document see document False 2011-10-29 ENCODE 2 27 ENCFF000YPK, ENCFF643CGH 710994643 ENCODE Processing Pipeline 1bbc612856bcbab6829d08758b8b7b1f https://www.encodeproject.org/files/ENCFF693OEL/@@download/ENCFF693OEL.bam GRCh38 released control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth ENCFF267UQD bigWig fold change over control ENCSR000FBC ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour STAT2-human ENCAB000ALG DNA see document see document False 2011-10-29 ENCODE 2 ENCFF332CUX, ENCFF876GQO 151496804 ENCODE Processing Pipeline 47368fda344a227945bdd42d5bfd56a3 https://www.encodeproject.org/files/ENCFF267UQD/@@download/ENCFF267UQD.bigWig GRCh38 released control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth ENCFF079ITT bigWig signal p-value ENCSR000FBC ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour STAT2-human ENCAB000ALG DNA see document see document False 2011-10-29 ENCODE 2 ENCFF900YNG, ENCFF998GMZ 245716882 ENCODE Processing Pipeline 0121d890b64ca74a68f77d48819371ce https://www.encodeproject.org/files/ENCFF079ITT/@@download/ENCFF079ITT.bigWig hg19 released control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth ENCFF950LES bigWig signal p-value ENCSR000FBC ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour STAT2-human ENCAB000ALG DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF332CUX, ENCFF876GQO, ENCFF951ITB 346212767 ENCODE Processing Pipeline 35d43f9b2fe5ea0aa50f5cf1e3d0f005 https://www.encodeproject.org/files/ENCFF950LES/@@download/ENCFF950LES.bigWig GRCh38 released control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth ENCFF056WXJ bigWig fold change over control ENCSR000FBC ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour STAT2-human ENCAB000ALG DNA see document see document False 2011-10-29 ENCODE 1 ENCFF332CUX, ENCFF951ITB 104140892 ENCODE Processing Pipeline 99e2a8f89e3f9e797a5e09ec252226bd https://www.encodeproject.org/files/ENCFF056WXJ/@@download/ENCFF056WXJ.bigWig GRCh38 released control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth ENCFF065KUV bigWig signal p-value ENCSR000FBC ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour STAT2-human ENCAB000ALG DNA see document see document False 2011-10-29 ENCODE 1 ENCFF332CUX, ENCFF951ITB 222158697 ENCODE Processing Pipeline 096eaa015d011ffbac46224d483f7e76 https://www.encodeproject.org/files/ENCFF065KUV/@@download/ENCFF065KUV.bigWig GRCh38 released control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth ENCFF117REP bigWig signal p-value ENCSR000FBC ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour STAT2-human ENCAB000ALG DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF900YNG, ENCFF969WVY, ENCFF998GMZ 286135117 ENCODE Processing Pipeline cfde2ecc15e47b0f33752c905f0b76d3 https://www.encodeproject.org/files/ENCFF117REP/@@download/ENCFF117REP.bigWig hg19 released control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth ENCFF936ODI bigWig signal p-value ENCSR000FBC ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour STAT2-human ENCAB000ALG DNA see document see document False 2011-10-29 ENCODE 1 ENCFF969WVY, ENCFF998GMZ 273967649 ENCODE Processing Pipeline 5d823e8c499ef45e981d3c6a705829c1 https://www.encodeproject.org/files/ENCFF936ODI/@@download/ENCFF936ODI.bigWig hg19 released control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth ENCFF267HST bigWig signal p-value ENCSR000FBC ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour STAT2-human ENCAB000ALG DNA see document see document False 2011-10-29 ENCODE 2 ENCFF332CUX, ENCFF876GQO 245569681 ENCODE Processing Pipeline b28c783575cfc508f668f165a2f5ac58 https://www.encodeproject.org/files/ENCFF267HST/@@download/ENCFF267HST.bigWig GRCh38 released control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth ENCFF499OEV bigWig fold change over control ENCSR000FBC ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour STAT2-human ENCAB000ALG DNA see document see document False 2011-10-29 ENCODE 1 ENCFF969WVY, ENCFF998GMZ 104073969 ENCODE Processing Pipeline e7838e48680c440f5f6d6136c37c0e71 https://www.encodeproject.org/files/ENCFF499OEV/@@download/ENCFF499OEV.bigWig hg19 released control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth ENCFF214KLT bigWig fold change over control ENCSR000FBC ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour STAT2-human ENCAB000ALG DNA see document see document False 2011-10-29 ENCODE 2 ENCFF900YNG, ENCFF998GMZ 151686878 ENCODE Processing Pipeline 94020fe34f92585114168e04978de322 https://www.encodeproject.org/files/ENCFF214KLT/@@download/ENCFF214KLT.bigWig hg19 released control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth ENCFF775RTT bigWig fold change over control ENCSR000FBC ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour STAT2-human ENCAB000ALG DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF900YNG, ENCFF969WVY, ENCFF998GMZ 234981136 ENCODE Processing Pipeline 9b12894b10470daf808c8df32c918a61 https://www.encodeproject.org/files/ENCFF775RTT/@@download/ENCFF775RTT.bigWig hg19 released control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth ENCFF201CUI bed narrowPeak peaks ENCSR000FBC ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour STAT2-human ENCAB000ALG DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF332CUX, ENCFF876GQO, ENCFF951ITB 4164833 ENCODE Processing Pipeline eb9e489f4bc9bbec28e61a313f62f383 https://www.encodeproject.org/files/ENCFF201CUI/@@download/ENCFF201CUI.bed.gz GRCh38 released control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth ENCFF881YHI bigWig fold change over control ENCSR000FBC ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour STAT2-human ENCAB000ALG DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF332CUX, ENCFF876GQO, ENCFF951ITB 234913563 ENCODE Processing Pipeline b3b2c4235831088da1c5dd5a4029617d https://www.encodeproject.org/files/ENCFF881YHI/@@download/ENCFF881YHI.bigWig GRCh38 released control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth ENCFF599VMK bed narrowPeak peaks ENCSR000FBC ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour STAT2-human ENCAB000ALG DNA see document see document False 2011-10-29 ENCODE 1 ENCFF969WVY, ENCFF998GMZ 1345941 ENCODE Processing Pipeline ad7df233444d5a1f7d90a06cba4f1494 https://www.encodeproject.org/files/ENCFF599VMK/@@download/ENCFF599VMK.bed.gz hg19 released control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth ENCFF544MLF bed narrowPeak peaks ENCSR000FBC ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour STAT2-human ENCAB000ALG DNA see document see document False 2011-10-29 ENCODE 1 ENCFF332CUX, ENCFF951ITB 1346705 ENCODE Processing Pipeline 67d90fcc463688fddf29ebbe857508a3 https://www.encodeproject.org/files/ENCFF544MLF/@@download/ENCFF544MLF.bed.gz GRCh38 released control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth ENCFF127UZX bed narrowPeak peaks ENCSR000FBC ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour STAT2-human ENCAB000ALG DNA see document see document False 2011-10-29 ENCODE 2 ENCFF900YNG, ENCFF998GMZ 2639252 ENCODE Processing Pipeline 5a179ea069533493ab67c3846b2f16e4 https://www.encodeproject.org/files/ENCFF127UZX/@@download/ENCFF127UZX.bed.gz hg19 released control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth ENCFF454USA bigBed narrowPeak peaks ENCSR000FBC ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour STAT2-human ENCAB000ALG DNA see document see document False 2011-10-29 ENCODE 1 ENCFF544MLF 2980238 ENCODE Processing Pipeline 52b6a3b56bfe47ea4afd2c2617f2d2f5 https://www.encodeproject.org/files/ENCFF454USA/@@download/ENCFF454USA.bigBed GRCh38 released control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth ENCFF123YGX bed narrowPeak peaks ENCSR000FBC ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour STAT2-human ENCAB000ALG DNA see document see document False 2011-10-29 ENCODE 2 ENCFF332CUX, ENCFF876GQO 2634911 ENCODE Processing Pipeline 8649724972f3258640a00d64083d15df https://www.encodeproject.org/files/ENCFF123YGX/@@download/ENCFF123YGX.bed.gz GRCh38 released control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth ENCFF308HMT bigBed narrowPeak peaks ENCSR000FBC ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour STAT2-human ENCAB000ALG DNA see document see document False 2011-10-29 ENCODE 1 ENCFF599VMK 2978186 ENCODE Processing Pipeline 4ac64061b939cd3d8d0872c194d624f7 https://www.encodeproject.org/files/ENCFF308HMT/@@download/ENCFF308HMT.bigBed hg19 released control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth ENCFF697GQV bed narrowPeak peaks ENCSR000FBC ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour STAT2-human ENCAB000ALG DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF900YNG, ENCFF969WVY, ENCFF998GMZ 4173794 ENCODE Processing Pipeline 8b7cd1bc822ff1bba4f5025aed089f8f https://www.encodeproject.org/files/ENCFF697GQV/@@download/ENCFF697GQV.bed.gz hg19 released control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth ENCFF950ECN bigBed narrowPeak conservative idr thresholded peaks ENCSR000FBC ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour STAT2-human ENCAB000ALG DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF273MGI 118593 ENCODE Processing Pipeline f423e4861221d35f7faf2a1e9df73c56 https://www.encodeproject.org/files/ENCFF950ECN/@@download/ENCFF950ECN.bigBed hg19 released control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth ENCFF360SEL bigBed narrowPeak peaks ENCSR000FBC ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour STAT2-human ENCAB000ALG DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF697GQV 10189508 ENCODE Processing Pipeline c91f12d184b941b8dd8cba8c7b8f5f12 https://www.encodeproject.org/files/ENCFF360SEL/@@download/ENCFF360SEL.bigBed hg19 released control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth ENCFF273MGI bed narrowPeak conservative idr thresholded peaks ENCSR000FBC ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour STAT2-human ENCAB000ALG DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF001TDO, ENCFF127UZX, ENCFF599VMK, ENCFF697GQV 35662 ENCODE Processing Pipeline b75b69e6df9cdfc3fe4fcdf6ed4e2874 https://www.encodeproject.org/files/ENCFF273MGI/@@download/ENCFF273MGI.bed.gz hg19 released control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth ENCFF702EGB bigBed narrowPeak conservative idr thresholded peaks ENCSR000FBC ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour STAT2-human ENCAB000ALG DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF443IZC 121908 ENCODE Processing Pipeline 235c500f23a695e158e5dc406bf282a0 https://www.encodeproject.org/files/ENCFF702EGB/@@download/ENCFF702EGB.bigBed GRCh38 released control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth ENCFF841YFF bed narrowPeak optimal idr thresholded peaks ENCSR000FBC ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour STAT2-human ENCAB000ALG DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF001TDO, ENCFF127UZX, ENCFF599VMK, ENCFF697GQV 37252 ENCODE Processing Pipeline fbccfe352a1f49d06bfa09b7f2ff0116 https://www.encodeproject.org/files/ENCFF841YFF/@@download/ENCFF841YFF.bed.gz hg19 released control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth ENCFF240WCH bigBed narrowPeak peaks ENCSR000FBC ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour STAT2-human ENCAB000ALG DNA see document see document False 2011-10-29 ENCODE 2 ENCFF123YGX 6624367 ENCODE Processing Pipeline 8ad5831ff0f08e9e3bcdfe9e2b275c5b https://www.encodeproject.org/files/ENCFF240WCH/@@download/ENCFF240WCH.bigBed GRCh38 released control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth ENCFF399DLR bigBed narrowPeak peaks ENCSR000FBC ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour STAT2-human ENCAB000ALG DNA see document see document False 2011-10-29 ENCODE 2 ENCFF127UZX 6646109 ENCODE Processing Pipeline 522519a2f0d1cd411d410c3dae7f39ad https://www.encodeproject.org/files/ENCFF399DLR/@@download/ENCFF399DLR.bigBed hg19 released control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth ENCFF545JVD bed narrowPeak optimal idr thresholded peaks ENCSR000FBC ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour STAT2-human ENCAB000ALG DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF123YGX, ENCFF201CUI, ENCFF419RSJ, ENCFF544MLF 40880 ENCODE Processing Pipeline a891a9fda490ce3ed55772f7fbfc5a79 https://www.encodeproject.org/files/ENCFF545JVD/@@download/ENCFF545JVD.bed.gz GRCh38 released control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth ENCFF443IZC bed narrowPeak conservative idr thresholded peaks ENCSR000FBC ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour STAT2-human ENCAB000ALG DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF123YGX, ENCFF201CUI, ENCFF419RSJ, ENCFF544MLF 38081 ENCODE Processing Pipeline c1832bbd8257a431b9bf48d8c2f79fbe https://www.encodeproject.org/files/ENCFF443IZC/@@download/ENCFF443IZC.bed.gz GRCh38 released control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth ENCFF984OMQ bigBed narrowPeak peaks ENCSR000FBC ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour STAT2-human ENCAB000ALG DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF201CUI 10226192 ENCODE Processing Pipeline 32740430bda831d917e20ad8006655dc https://www.encodeproject.org/files/ENCFF984OMQ/@@download/ENCFF984OMQ.bigBed GRCh38 released control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth ENCFF192KSQ bigBed narrowPeak optimal idr thresholded peaks ENCSR000FBC ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour STAT2-human ENCAB000ALG DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF545JVD 126159 ENCODE Processing Pipeline 15becdade5ffc419a7512510e544774f https://www.encodeproject.org/files/ENCFF192KSQ/@@download/ENCFF192KSQ.bigBed GRCh38 released control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth ENCFF707BCC bigBed narrowPeak optimal idr thresholded peaks ENCSR000FBC ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour STAT2-human ENCAB000ALG DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF841YFF 121162 ENCODE Processing Pipeline 207e37f92d668f702143de81440a629b https://www.encodeproject.org/files/ENCFF707BCC/@@download/ENCFF707BCC.bigBed hg19 released control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth ENCFF000YXP bam alignments ENCSR000EHQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR3G-human ENCAB000AKB DNA see document see document False 2011-10-29 ENCODE 1 ENCFF000YXT 146164790 Michael Snyder, Stanford afd80adf402822a51208ddcbb0aa8b58 https://www.encodeproject.org/files/ENCFF000YXP/@@download/ENCFF000YXP.bam hg19 released biological replicates with identical biosample insufficient read length ENCFF000YXQ bam alignments ENCSR000EHQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR3G-human ENCAB000AKB DNA see document see document False 2011-10-29 ENCODE 2 ENCFF000YYA 139904241 Michael Snyder, Stanford 740bf0c412cd173cf72ee5ba4e41e63f https://www.encodeproject.org/files/ENCFF000YXQ/@@download/ENCFF000YXQ.bam hg19 released biological replicates with identical biosample insufficient read length ENCFF000YXR bigBed narrowPeak peaks ENCSR000EHQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR3G-human ENCAB000AKB DNA see document see document False 2011-10-29 ENCODE ENCFF001VOL 79638 Michael Snyder, Stanford 586b91a96c24b595e84233291610c391 https://www.encodeproject.org/files/ENCFF000YXR/@@download/ENCFF000YXR.bigBed hg19 released biological replicates with identical biosample insufficient read length ENCFF000YXS bigWig signal ENCSR000EHQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR3G-human ENCAB000AKB DNA see document see document False 2011-10-29 ENCODE 291789520 Michael Snyder, Stanford b27a37aba97933f74da7c6f52c8a4535 https://www.encodeproject.org/files/ENCFF000YXS/@@download/ENCFF000YXS.bigWig hg19 released biological replicates with identical biosample, missing derived_from insufficient read length ENCFF000YXT fastq reads ENCSR000EHQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR3G-human ENCAB000AKB DNA see document see document False 2011-10-29 ENCODE 1 1 27 single-ended 112343434 Michael Snyder, Stanford 965514eb2bdd94b52a53003b5e439bca https://www.encodeproject.org/files/ENCFF000YXT/@@download/ENCFF000YXT.fastq.gz Illumina Genome Analyzer /files/ENCFF000YRN/ released biological replicates with identical biosample insufficient read length ENCFF000YYA fastq reads ENCSR000EHQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR3G-human ENCAB000AKB DNA see document see document False 2011-10-29 ENCODE 2 1 27 single-ended 108905251 Michael Snyder, Stanford c49b219aa4a13e0119d5f8b31e0f9906 https://www.encodeproject.org/files/ENCFF000YYA/@@download/ENCFF000YYA.fastq.gz Illumina Genome Analyzer /files/ENCFF000YRC/ released biological replicates with identical biosample insufficient read length ENCFF001VOL bed narrowPeak peaks ENCSR000EHQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR3G-human ENCAB000AKB DNA see document see document False 2011-10-29 ENCODE 2127 Michael Snyder, Stanford 9123418a8d342a40a1f9614cbfca0806 https://www.encodeproject.org/files/ENCFF001VOL/@@download/ENCFF001VOL.bed.gz hg19 released biological replicates with identical biosample, missing derived_from insufficient read length ENCFF002CXT bed narrowPeak optimal idr thresholded peaks ENCSR000EHQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR3G-human ENCAB000AKB DNA see document see document False 2011-10-29 ENCODE 4627 ENCODE Consortium Analysis Working Group bda0160eadd3d7e99ccac755fa0b2e2c https://www.encodeproject.org/files/ENCFF002CXT/@@download/ENCFF002CXT.bed.gz hg19 released biological replicates with identical biosample, missing derived_from insufficient read length ENCFF151YVA bigBed narrowPeak optimal idr thresholded peaks ENCSR000EHQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR3G-human ENCAB000AKB DNA see document see document False 2011-10-29 ENCODE ENCFF002CXT 86120 ENCODE Consortium bd6f949bcf7f78a5508ec4d30caf41e7 https://www.encodeproject.org/files/ENCFF151YVA/@@download/ENCFF151YVA.bigBed hg19 released biological replicates with identical biosample insufficient read length ENCFF000YFJ bam alignments ENCSR000DOG ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF3-human ENCAB000ADZ DNA see document see document False 2011-10-29 ENCODE 1 ENCFF000YFV 557957429 Kevin Struhl, HMS dd41a5025c35d54529d541b2b0f2ba4c https://www.encodeproject.org/files/ENCFF000YFJ/@@download/ENCFF000YFJ.bam hg19 released biological replicates with identical biosample insufficient read length ENCFF000YFK bigBed narrowPeak peaks ENCSR000DOG ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF3-human ENCAB000ADZ DNA see document see document False 2011-10-29 ENCODE ENCFF001VLY 95672 Kevin Struhl, HMS 40914d3434a076ecd373cd454997285f https://www.encodeproject.org/files/ENCFF000YFK/@@download/ENCFF000YFK.bigBed hg19 released biological replicates with identical biosample insufficient read length ENCFF000YFL bigWig signal ENCSR000DOG ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF3-human ENCAB000ADZ DNA see document see document False 2011-10-29 ENCODE 371008711 Kevin Struhl, HMS 441597c9714f4366e2c52f709d302949 https://www.encodeproject.org/files/ENCFF000YFL/@@download/ENCFF000YFL.bigWig hg19 released biological replicates with identical biosample, missing derived_from insufficient read length ENCFF000YFM bam alignments ENCSR000DOG ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF3-human ENCAB000ADZ DNA see document see document False 2011-10-29 ENCODE 2 ENCFF000YFW 884050408 Kevin Struhl, HMS 41290ca31331cf440a7df44690d6b903 https://www.encodeproject.org/files/ENCFF000YFM/@@download/ENCFF000YFM.bam hg19 released biological replicates with identical biosample insufficient read length ENCFF000YFV fastq reads ENCSR000DOG ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF3-human ENCAB000ADZ DNA see document see document False 2011-10-29 ENCODE 1 1 34 single-ended 430495780 Kevin Struhl, HMS 439c941c937f3cc9f430f45015447055 https://www.encodeproject.org/files/ENCFF000YFV/@@download/ENCFF000YFV.fastq.gz Illumina Genome Analyzer /files/ENCFF000YRN/ released inconsistent control read length biological replicates with identical biosample insufficient read length ENCFF000YFW fastq reads ENCSR000DOG ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF3-human ENCAB000ADZ DNA see document see document False 2011-10-29 ENCODE 2 1 34 single-ended 687084388 Kevin Struhl, HMS c611192a803de171681a0bb310ca01be https://www.encodeproject.org/files/ENCFF000YFW/@@download/ENCFF000YFW.fastq.gz Illumina Genome Analyzer /files/ENCFF000YRC/ released inconsistent control read length biological replicates with identical biosample insufficient read length ENCFF001VLY bed narrowPeak peaks ENCSR000DOG ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF3-human ENCAB000ADZ DNA see document see document False 2011-10-29 ENCODE 15999 Kevin Struhl, HMS bb4b58423b77a01e4bde05290e5f507b https://www.encodeproject.org/files/ENCFF001VLY/@@download/ENCFF001VLY.bed.gz hg19 released biological replicates with identical biosample, missing derived_from insufficient read length ENCFF002CVN bed narrowPeak optimal idr thresholded peaks ENCSR000DOG ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF3-human ENCAB000ADZ DNA see document see document False 2011-10-29 ENCODE 30756 ENCODE Consortium Analysis Working Group f96359d316397bebb076f46153d104bf https://www.encodeproject.org/files/ENCFF002CVN/@@download/ENCFF002CVN.bed.gz hg19 released biological replicates with identical biosample, missing derived_from insufficient read length ENCFF946MDJ bigBed narrowPeak optimal idr thresholded peaks ENCSR000DOG ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF3-human ENCAB000ADZ DNA see document see document False 2011-10-29 ENCODE ENCFF002CVN 121750 ENCODE Consortium b7c9773e137ee786a12d109c6d4d87e6 https://www.encodeproject.org/files/ENCFF946MDJ/@@download/ENCFF946MDJ.bigBed hg19 released biological replicates with identical biosample insufficient read length ENCFF574FTC fastq reads ENCSR492LTS ChIP-seq EFO:0002067 K562 cell line Homo sapiens BCLAF1-human ENCAB012FUX DNA False 2017-02-02 ENCODE 2 1 100 paired-ended 2 ENCFF188VON 2196587357 Michael Snyder, Stanford 563060a1d0aa74d9fc77f7f6e85cbd9f SRA:SRR6213860 https://www.encodeproject.org/files/ENCFF574FTC/@@download/ENCFF574FTC.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFA/ released borderline replicate concordance, low read depth, antibody characterized with exemption ENCFF744DBX fastq reads ENCSR492LTS ChIP-seq EFO:0002067 K562 cell line Homo sapiens BCLAF1-human ENCAB012FUX DNA False 2017-02-02 ENCODE 1 1 100 paired-ended 1 ENCFF834VSH 2353738626 Michael Snyder, Stanford 63246010e207d18991f47ab1395bf163 SRA:SRR6213861 https://www.encodeproject.org/files/ENCFF744DBX/@@download/ENCFF744DBX.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFF/ released borderline replicate concordance, low read depth, antibody characterized with exemption ENCFF188VON fastq reads ENCSR492LTS ChIP-seq EFO:0002067 K562 cell line Homo sapiens BCLAF1-human ENCAB012FUX DNA False 2017-02-02 ENCODE 2 1 100 paired-ended 1 ENCFF574FTC 2167902015 Michael Snyder, Stanford 5b25fb5cccc2ecd259aa46a895dcb9cc SRA:SRR6213860 https://www.encodeproject.org/files/ENCFF188VON/@@download/ENCFF188VON.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFD/ released borderline replicate concordance, low read depth, antibody characterized with exemption ENCFF834VSH fastq reads ENCSR492LTS ChIP-seq EFO:0002067 K562 cell line Homo sapiens BCLAF1-human ENCAB012FUX DNA False 2017-02-02 ENCODE 1 1 100 paired-ended 2 ENCFF744DBX 2397179949 Michael Snyder, Stanford aa21c21978bc9938e16e5ff0238d7bee SRA:SRR6213861 https://www.encodeproject.org/files/ENCFF834VSH/@@download/ENCFF834VSH.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFH/ released borderline replicate concordance, low read depth, antibody characterized with exemption ENCFF323IVG bam alignments ENCSR492LTS ChIP-seq EFO:0002067 K562 cell line Homo sapiens BCLAF1-human ENCAB012FUX DNA False 2017-02-02 ENCODE 1 100 ENCFF643CGH, ENCFF744DBX, ENCFF834VSH 3575086421 ENCODE Processing Pipeline 4969325bca7a1fe86c0a08896c479f27 https://www.encodeproject.org/files/ENCFF323IVG/@@download/ENCFF323IVG.bam GRCh38 released borderline replicate concordance, low read depth, antibody characterized with exemption ENCFF946YOG bam unfiltered alignments ENCSR492LTS ChIP-seq EFO:0002067 K562 cell line Homo sapiens BCLAF1-human ENCAB012FUX DNA False 2017-02-02 ENCODE 1 100 ENCFF643CGH, ENCFF744DBX, ENCFF834VSH 5123624879 ENCODE Processing Pipeline b31f5b09174d7dfa9b4d0fd4e8151a6e https://www.encodeproject.org/files/ENCFF946YOG/@@download/ENCFF946YOG.bam GRCh38 released borderline replicate concordance, low read depth, antibody characterized with exemption ENCFF419APU bam unfiltered alignments ENCSR492LTS ChIP-seq EFO:0002067 K562 cell line Homo sapiens BCLAF1-human ENCAB012FUX DNA False 2017-02-02 ENCODE 2 100 ENCFF188VON, ENCFF574FTC, ENCFF643CGH 4798867519 ENCODE Processing Pipeline 20d073b3ee2c003b9a7ebbc0b6ad92e1 https://www.encodeproject.org/files/ENCFF419APU/@@download/ENCFF419APU.bam GRCh38 released borderline replicate concordance, low read depth, antibody characterized with exemption ENCFF862XFS bam alignments ENCSR492LTS ChIP-seq EFO:0002067 K562 cell line Homo sapiens BCLAF1-human ENCAB012FUX DNA False 2017-02-02 ENCODE 2 100 ENCFF188VON, ENCFF574FTC, ENCFF643CGH 3759710354 ENCODE Processing Pipeline eef54ec03bd1a9e5469e1d43403e3106 https://www.encodeproject.org/files/ENCFF862XFS/@@download/ENCFF862XFS.bam GRCh38 released borderline replicate concordance, low read depth, antibody characterized with exemption ENCFF604FNI bigWig signal p-value ENCSR492LTS ChIP-seq EFO:0002067 K562 cell line Homo sapiens BCLAF1-human ENCAB012FUX DNA False 2017-02-02 ENCODE 1 ENCFF323IVG, ENCFF910IKB 1136761399 ENCODE Processing Pipeline c66f6ed7aeca85564597cbf697955f0b https://www.encodeproject.org/files/ENCFF604FNI/@@download/ENCFF604FNI.bigWig GRCh38 released borderline replicate concordance, low read depth, antibody characterized with exemption ENCFF902ZQO bigBed narrowPeak peaks ENCSR492LTS ChIP-seq EFO:0002067 K562 cell line Homo sapiens BCLAF1-human ENCAB012FUX DNA False 2017-02-02 ENCODE 1 ENCFF799KQV 11277758 ENCODE Processing Pipeline 790a77a8c74ce127b806b9ac70de857f https://www.encodeproject.org/files/ENCFF902ZQO/@@download/ENCFF902ZQO.bigBed GRCh38 released borderline replicate concordance, low read depth, antibody characterized with exemption ENCFF110WHJ bed narrowPeak peaks ENCSR492LTS ChIP-seq EFO:0002067 K562 cell line Homo sapiens BCLAF1-human ENCAB012FUX DNA False 2017-02-02 ENCODE 2 ENCFF227IZS, ENCFF862XFS 5663782 ENCODE Processing Pipeline fd128ffdaa7fd80c453ef7691c01b730 https://www.encodeproject.org/files/ENCFF110WHJ/@@download/ENCFF110WHJ.bed.gz GRCh38 released borderline replicate concordance, low read depth, antibody characterized with exemption ENCFF315YWG bigWig signal p-value ENCSR492LTS ChIP-seq EFO:0002067 K562 cell line Homo sapiens BCLAF1-human ENCAB012FUX DNA False 2017-02-02 ENCODE 2 ENCFF227IZS, ENCFF862XFS 924969696 ENCODE Processing Pipeline 69b8a663488c62fd27e584d73d3b3fd7 https://www.encodeproject.org/files/ENCFF315YWG/@@download/ENCFF315YWG.bigWig GRCh38 released borderline replicate concordance, low read depth, antibody characterized with exemption ENCFF408MFT bigWig signal p-value ENCSR492LTS ChIP-seq EFO:0002067 K562 cell line Homo sapiens BCLAF1-human ENCAB012FUX DNA False 2017-02-02 ENCODE 1, 2 ENCFF227IZS, ENCFF323IVG, ENCFF862XFS, ENCFF910IKB 1798465346 ENCODE Processing Pipeline a244c5e6b3811dd8d3e7645867c51ab7 https://www.encodeproject.org/files/ENCFF408MFT/@@download/ENCFF408MFT.bigWig GRCh38 released borderline replicate concordance, low read depth, antibody characterized with exemption ENCFF179QVT bigWig fold change over control ENCSR492LTS ChIP-seq EFO:0002067 K562 cell line Homo sapiens BCLAF1-human ENCAB012FUX DNA False 2017-02-02 ENCODE 1 ENCFF323IVG, ENCFF910IKB 1040193696 ENCODE Processing Pipeline 592d2f72f7f263bc7f6c989976e2f983 https://www.encodeproject.org/files/ENCFF179QVT/@@download/ENCFF179QVT.bigWig GRCh38 released borderline replicate concordance, low read depth, antibody characterized with exemption ENCFF991KFU bigWig fold change over control ENCSR492LTS ChIP-seq EFO:0002067 K562 cell line Homo sapiens BCLAF1-human ENCAB012FUX DNA False 2017-02-02 ENCODE 2 ENCFF227IZS, ENCFF862XFS 1058159176 ENCODE Processing Pipeline 685f4b8e6a2685015c456d76eba5147d https://www.encodeproject.org/files/ENCFF991KFU/@@download/ENCFF991KFU.bigWig GRCh38 released borderline replicate concordance, low read depth, antibody characterized with exemption ENCFF355YUJ bigWig fold change over control ENCSR492LTS ChIP-seq EFO:0002067 K562 cell line Homo sapiens BCLAF1-human ENCAB012FUX DNA False 2017-02-02 ENCODE 1, 2 ENCFF227IZS, ENCFF323IVG, ENCFF862XFS, ENCFF910IKB 1987047310 ENCODE Processing Pipeline 8df2bc0faafcfaa5359ab5cfe4809851 https://www.encodeproject.org/files/ENCFF355YUJ/@@download/ENCFF355YUJ.bigWig GRCh38 released borderline replicate concordance, low read depth, antibody characterized with exemption ENCFF799KQV bed narrowPeak peaks ENCSR492LTS ChIP-seq EFO:0002067 K562 cell line Homo sapiens BCLAF1-human ENCAB012FUX DNA False 2017-02-02 ENCODE 1 ENCFF323IVG, ENCFF910IKB 6007579 ENCODE Processing Pipeline 5eeb4d67c018aaa2ab36fe96ba89d924 https://www.encodeproject.org/files/ENCFF799KQV/@@download/ENCFF799KQV.bed.gz GRCh38 released borderline replicate concordance, low read depth, antibody characterized with exemption ENCFF806AJO bed narrowPeak peaks ENCSR492LTS ChIP-seq EFO:0002067 K562 cell line Homo sapiens BCLAF1-human ENCAB012FUX DNA False 2017-02-02 ENCODE 1, 2 ENCFF227IZS, ENCFF323IVG, ENCFF862XFS, ENCFF910IKB 6943476 ENCODE Processing Pipeline 0d638464f5d2e31134c3ec9dda315a17 https://www.encodeproject.org/files/ENCFF806AJO/@@download/ENCFF806AJO.bed.gz GRCh38 released borderline replicate concordance, low read depth, antibody characterized with exemption ENCFF270DBK bigBed narrowPeak peaks ENCSR492LTS ChIP-seq EFO:0002067 K562 cell line Homo sapiens BCLAF1-human ENCAB012FUX DNA False 2017-02-02 ENCODE 2 ENCFF110WHJ 11205196 ENCODE Processing Pipeline 4a2d850a5073420a83b9257545d63754 https://www.encodeproject.org/files/ENCFF270DBK/@@download/ENCFF270DBK.bigBed GRCh38 released borderline replicate concordance, low read depth, antibody characterized with exemption ENCFF515SHI bigBed narrowPeak peaks ENCSR492LTS ChIP-seq EFO:0002067 K562 cell line Homo sapiens BCLAF1-human ENCAB012FUX DNA False 2017-02-02 ENCODE 1, 2 ENCFF806AJO 11138114 ENCODE Processing Pipeline 1b54def9e2a53da811749144d7f61f23 https://www.encodeproject.org/files/ENCFF515SHI/@@download/ENCFF515SHI.bigBed GRCh38 released borderline replicate concordance, low read depth, antibody characterized with exemption ENCFF205LME bed narrowPeak conservative idr thresholded peaks ENCSR492LTS ChIP-seq EFO:0002067 K562 cell line Homo sapiens BCLAF1-human ENCAB012FUX DNA False 2017-02-02 ENCODE 1, 2 ENCFF110WHJ, ENCFF419RSJ, ENCFF799KQV, ENCFF806AJO 21261 ENCODE Processing Pipeline 1d182280a8311f07ace6ee7ce48aa9e1 https://www.encodeproject.org/files/ENCFF205LME/@@download/ENCFF205LME.bed.gz GRCh38 released borderline replicate concordance, low read depth, antibody characterized with exemption ENCFF119PZO bigBed narrowPeak conservative idr thresholded peaks ENCSR492LTS ChIP-seq EFO:0002067 K562 cell line Homo sapiens BCLAF1-human ENCAB012FUX DNA False 2017-02-02 ENCODE 1, 2 ENCFF205LME 105297 ENCODE Processing Pipeline 42801f22f4aea2996348dc1143c67cc9 https://www.encodeproject.org/files/ENCFF119PZO/@@download/ENCFF119PZO.bigBed GRCh38 released borderline replicate concordance, low read depth, antibody characterized with exemption ENCFF054DTJ bed narrowPeak optimal idr thresholded peaks ENCSR492LTS ChIP-seq EFO:0002067 K562 cell line Homo sapiens BCLAF1-human ENCAB012FUX DNA False 2017-02-02 ENCODE 1, 2 ENCFF110WHJ, ENCFF419RSJ, ENCFF799KQV, ENCFF806AJO 62610 ENCODE Processing Pipeline 11e37f4d08c13ba386427268a861516b https://www.encodeproject.org/files/ENCFF054DTJ/@@download/ENCFF054DTJ.bed.gz GRCh38 released borderline replicate concordance, low read depth, antibody characterized with exemption ENCFF923TLC bigBed narrowPeak optimal idr thresholded peaks ENCSR492LTS ChIP-seq EFO:0002067 K562 cell line Homo sapiens BCLAF1-human ENCAB012FUX DNA False 2017-02-02 ENCODE 1, 2 ENCFF054DTJ 202657 ENCODE Processing Pipeline 7d8bd4a3ea7fce79b1c7a026d0a2669b https://www.encodeproject.org/files/ENCFF923TLC/@@download/ENCFF923TLC.bigBed GRCh38 released borderline replicate concordance, low read depth, antibody characterized with exemption ENCFF847OPX bam unfiltered alignments ENCSR492LTS ChIP-seq EFO:0002067 K562 cell line Homo sapiens BCLAF1-human ENCAB012FUX DNA False 2017-02-02 ENCODE 2 100 ENCFF188VON, ENCFF574FTC, ENCFF807MUK 4794468025 ENCODE Processing Pipeline 790551110e01365f958ebfe9c1eee99e https://www.encodeproject.org/files/ENCFF847OPX/@@download/ENCFF847OPX.bam hg19 released borderline replicate concordance, low read depth, antibody characterized with exemption ENCFF584LEL bam unfiltered alignments ENCSR492LTS ChIP-seq EFO:0002067 K562 cell line Homo sapiens BCLAF1-human ENCAB012FUX DNA False 2017-02-02 ENCODE 1 100 ENCFF744DBX, ENCFF807MUK, ENCFF834VSH 5120118114 ENCODE Processing Pipeline bfb1069c22600f314a01aa8e511ee4fd https://www.encodeproject.org/files/ENCFF584LEL/@@download/ENCFF584LEL.bam hg19 released borderline replicate concordance, low read depth, antibody characterized with exemption ENCFF687OFO bam alignments ENCSR492LTS ChIP-seq EFO:0002067 K562 cell line Homo sapiens BCLAF1-human ENCAB012FUX DNA False 2017-02-02 ENCODE 2 100 ENCFF188VON, ENCFF574FTC, ENCFF807MUK 3757521635 ENCODE Processing Pipeline 9e0e08c32cf434ce838c37a56b8e85a5 https://www.encodeproject.org/files/ENCFF687OFO/@@download/ENCFF687OFO.bam hg19 released borderline replicate concordance, low read depth, antibody characterized with exemption ENCFF623FBO bam alignments ENCSR492LTS ChIP-seq EFO:0002067 K562 cell line Homo sapiens BCLAF1-human ENCAB012FUX DNA False 2017-02-02 ENCODE 1 100 ENCFF744DBX, ENCFF807MUK, ENCFF834VSH 3572703204 ENCODE Processing Pipeline a2cb4567d6fa17f6324d2bbd918b3adb https://www.encodeproject.org/files/ENCFF623FBO/@@download/ENCFF623FBO.bam hg19 released borderline replicate concordance, low read depth, antibody characterized with exemption ENCFF011JJQ bigWig signal p-value ENCSR492LTS ChIP-seq EFO:0002067 K562 cell line Homo sapiens BCLAF1-human ENCAB012FUX DNA False 2017-02-02 ENCODE 2 ENCFF051LWI, ENCFF687OFO 917337305 ENCODE Processing Pipeline 4e251d9244b0223ab0325fb873858776 https://www.encodeproject.org/files/ENCFF011JJQ/@@download/ENCFF011JJQ.bigWig hg19 released borderline replicate concordance, low read depth, antibody characterized with exemption ENCFF531RZX bigWig signal p-value ENCSR492LTS ChIP-seq EFO:0002067 K562 cell line Homo sapiens BCLAF1-human ENCAB012FUX DNA False 2017-02-02 ENCODE 1 ENCFF581ZJL, ENCFF623FBO 1092446759 ENCODE Processing Pipeline 481d62af0c43948faad6e0417f7854e5 https://www.encodeproject.org/files/ENCFF531RZX/@@download/ENCFF531RZX.bigWig hg19 released borderline replicate concordance, low read depth, antibody characterized with exemption ENCFF535EEB bigWig signal p-value ENCSR492LTS ChIP-seq EFO:0002067 K562 cell line Homo sapiens BCLAF1-human ENCAB012FUX DNA False 2017-02-02 ENCODE 1, 2 ENCFF051LWI, ENCFF581ZJL, ENCFF623FBO, ENCFF687OFO 1743593927 ENCODE Processing Pipeline 1d0f0dcd8764a10f0492d5abc689038e https://www.encodeproject.org/files/ENCFF535EEB/@@download/ENCFF535EEB.bigWig hg19 released borderline replicate concordance, low read depth, antibody characterized with exemption ENCFF860EQQ bigWig fold change over control ENCSR492LTS ChIP-seq EFO:0002067 K562 cell line Homo sapiens BCLAF1-human ENCAB012FUX DNA False 2017-02-02 ENCODE 2 ENCFF051LWI, ENCFF687OFO 1033071382 ENCODE Processing Pipeline bf9d39e5a79b023539bf93c619564869 https://www.encodeproject.org/files/ENCFF860EQQ/@@download/ENCFF860EQQ.bigWig hg19 released borderline replicate concordance, low read depth, antibody characterized with exemption ENCFF027UPQ bed narrowPeak peaks ENCSR492LTS ChIP-seq EFO:0002067 K562 cell line Homo sapiens BCLAF1-human ENCAB012FUX DNA False 2017-02-02 ENCODE 1 ENCFF581ZJL, ENCFF623FBO 6005463 ENCODE Processing Pipeline 1353812070a8ae4076074665d90ec565 https://www.encodeproject.org/files/ENCFF027UPQ/@@download/ENCFF027UPQ.bed.gz hg19 released borderline replicate concordance, low read depth, antibody characterized with exemption ENCFF662CIT bed narrowPeak peaks ENCSR492LTS ChIP-seq EFO:0002067 K562 cell line Homo sapiens BCLAF1-human ENCAB012FUX DNA False 2017-02-02 ENCODE 2 ENCFF051LWI, ENCFF687OFO 5665796 ENCODE Processing Pipeline 734bfef27a0bf430b9620e9a05ddb2b0 https://www.encodeproject.org/files/ENCFF662CIT/@@download/ENCFF662CIT.bed.gz hg19 released borderline replicate concordance, low read depth, antibody characterized with exemption ENCFF422KXR bigBed narrowPeak optimal idr thresholded peaks ENCSR492LTS ChIP-seq EFO:0002067 K562 cell line Homo sapiens BCLAF1-human ENCAB012FUX DNA False 2017-02-02 ENCODE 1, 2 ENCFF462CPT 198567 ENCODE Processing Pipeline 6f603dd66d7bb44f43116b727143ec29 https://www.encodeproject.org/files/ENCFF422KXR/@@download/ENCFF422KXR.bigBed hg19 released borderline replicate concordance, low read depth, antibody characterized with exemption ENCFF202AHW bed narrowPeak peaks ENCSR492LTS ChIP-seq EFO:0002067 K562 cell line Homo sapiens BCLAF1-human ENCAB012FUX DNA False 2017-02-02 ENCODE 1, 2 ENCFF051LWI, ENCFF581ZJL, ENCFF623FBO, ENCFF687OFO 6939829 ENCODE Processing Pipeline f60bc81957085889e127495f12db228a https://www.encodeproject.org/files/ENCFF202AHW/@@download/ENCFF202AHW.bed.gz hg19 released borderline replicate concordance, low read depth, antibody characterized with exemption ENCFF401FXT bed narrowPeak conservative idr thresholded peaks ENCSR492LTS ChIP-seq EFO:0002067 K562 cell line Homo sapiens BCLAF1-human ENCAB012FUX DNA False 2017-02-02 ENCODE 1, 2 ENCFF001TDO, ENCFF027UPQ, ENCFF202AHW, ENCFF662CIT 20186 ENCODE Processing Pipeline 0970677dc42cc851e920616c085ce58c https://www.encodeproject.org/files/ENCFF401FXT/@@download/ENCFF401FXT.bed.gz hg19 released borderline replicate concordance, low read depth, antibody characterized with exemption ENCFF136RAF bigWig fold change over control ENCSR492LTS ChIP-seq EFO:0002067 K562 cell line Homo sapiens BCLAF1-human ENCAB012FUX DNA False 2017-02-02 ENCODE 1, 2 ENCFF051LWI, ENCFF581ZJL, ENCFF623FBO, ENCFF687OFO 1968370152 ENCODE Processing Pipeline 17f82c2047c196d85ee9a527f513eee8 https://www.encodeproject.org/files/ENCFF136RAF/@@download/ENCFF136RAF.bigWig hg19 released borderline replicate concordance, low read depth, antibody characterized with exemption ENCFF889PDU bigWig fold change over control ENCSR492LTS ChIP-seq EFO:0002067 K562 cell line Homo sapiens BCLAF1-human ENCAB012FUX DNA False 2017-02-02 ENCODE 1 ENCFF581ZJL, ENCFF623FBO 1051748465 ENCODE Processing Pipeline 785436ea715a669d08a8b2a729470a81 https://www.encodeproject.org/files/ENCFF889PDU/@@download/ENCFF889PDU.bigWig hg19 released borderline replicate concordance, low read depth, antibody characterized with exemption ENCFF456IPI bigBed narrowPeak peaks ENCSR492LTS ChIP-seq EFO:0002067 K562 cell line Homo sapiens BCLAF1-human ENCAB012FUX DNA False 2017-02-02 ENCODE 1 ENCFF027UPQ 11264001 ENCODE Processing Pipeline c95f9267037db1b698342768b64f67b4 https://www.encodeproject.org/files/ENCFF456IPI/@@download/ENCFF456IPI.bigBed hg19 released borderline replicate concordance, low read depth, antibody characterized with exemption ENCFF761TYD bigBed narrowPeak conservative idr thresholded peaks ENCSR492LTS ChIP-seq EFO:0002067 K562 cell line Homo sapiens BCLAF1-human ENCAB012FUX DNA False 2017-02-02 ENCODE 1, 2 ENCFF401FXT 101844 ENCODE Processing Pipeline bc708bb1dc5b58ad122b9fabaad17528 https://www.encodeproject.org/files/ENCFF761TYD/@@download/ENCFF761TYD.bigBed hg19 released borderline replicate concordance, low read depth, antibody characterized with exemption ENCFF462CPT bed narrowPeak optimal idr thresholded peaks ENCSR492LTS ChIP-seq EFO:0002067 K562 cell line Homo sapiens BCLAF1-human ENCAB012FUX DNA False 2017-02-02 ENCODE 1, 2 ENCFF001TDO, ENCFF027UPQ, ENCFF202AHW, ENCFF662CIT 61355 ENCODE Processing Pipeline e5f4357bf52033266e56f7a93118ed40 https://www.encodeproject.org/files/ENCFF462CPT/@@download/ENCFF462CPT.bed.gz hg19 released borderline replicate concordance, low read depth, antibody characterized with exemption ENCFF051TIP bigBed narrowPeak peaks ENCSR492LTS ChIP-seq EFO:0002067 K562 cell line Homo sapiens BCLAF1-human ENCAB012FUX DNA False 2017-02-02 ENCODE 2 ENCFF662CIT 11190470 ENCODE Processing Pipeline 20647a8291697063b8c83b6088f7bbcb https://www.encodeproject.org/files/ENCFF051TIP/@@download/ENCFF051TIP.bigBed hg19 released borderline replicate concordance, low read depth, antibody characterized with exemption ENCFF058WOK bigBed narrowPeak peaks ENCSR492LTS ChIP-seq EFO:0002067 K562 cell line Homo sapiens BCLAF1-human ENCAB012FUX DNA False 2017-02-02 ENCODE 1, 2 ENCFF202AHW 11119822 ENCODE Processing Pipeline eb6e759d992395151267c06d0ec29c28 https://www.encodeproject.org/files/ENCFF058WOK/@@download/ENCFF058WOK.bigBed hg19 released borderline replicate concordance, low read depth, antibody characterized with exemption ENCFF932MLQ bam unfiltered alignments ENCSR239ZLZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-FOSL1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 50 ENCFF253CXQ, ENCFF381IRT, ENCFF807MUK 2035961614 ENCODE Processing Pipeline 47552479d8e25f445a30a7b17c3e9e5a https://www.encodeproject.org/files/ENCFF932MLQ/@@download/ENCFF932MLQ.bam hg19 released missing genetic modification characterization ENCFF352NBT bam unfiltered alignments ENCSR239ZLZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-FOSL1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 50 ENCFF429QSN, ENCFF645REX, ENCFF807MUK 1850751821 ENCODE Processing Pipeline c6f7c6906744cbc11b59e1d838998d01 https://www.encodeproject.org/files/ENCFF352NBT/@@download/ENCFF352NBT.bam hg19 released missing genetic modification characterization ENCFF253CXQ fastq reads ENCSR239ZLZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-FOSL1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 1 50 single-ended 874779324 Kevin White, UChicago d42078ff23b8d421bf9ea614590a2cec SRA:SRR6212947 https://www.encodeproject.org/files/ENCFF253CXQ/@@download/ENCFF253CXQ.fastq.gz Illumina HiSeq 2000 /files/ENCFF446PVB/, /files/ENCFF455LJL/ released missing genetic modification characterization ENCFF645REX fastq reads ENCSR239ZLZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-FOSL1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 1 50 single-ended 902941253 Kevin White, UChicago 7771db2acdcb992310968f860803486f SRA:SRR6212945 https://www.encodeproject.org/files/ENCFF645REX/@@download/ENCFF645REX.fastq.gz Illumina HiSeq 2000 /files/ENCFF446PVB/, /files/ENCFF455LJL/ released missing genetic modification characterization ENCFF381IRT fastq reads ENCSR239ZLZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-FOSL1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 1 50 single-ended 1131044022 Kevin White, UChicago a5e6eafe8306ac74e4f3285c9a732a24 SRA:SRR6212948 https://www.encodeproject.org/files/ENCFF381IRT/@@download/ENCFF381IRT.fastq.gz Illumina HiSeq 2500 /files/ENCFF446PVB/, /files/ENCFF455LJL/ released missing genetic modification characterization ENCFF429QSN fastq reads ENCSR239ZLZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-FOSL1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 1 50 single-ended 912692057 Kevin White, UChicago 3d6473a54b7820592d1e07819d14f6b6 SRA:SRR6212946 https://www.encodeproject.org/files/ENCFF429QSN/@@download/ENCFF429QSN.fastq.gz Illumina HiSeq 2500 /files/ENCFF446PVB/, /files/ENCFF455LJL/ released missing genetic modification characterization ENCFF541WBX bam alignments ENCSR239ZLZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-FOSL1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 50 ENCFF253CXQ, ENCFF381IRT, ENCFF807MUK 1506656284 ENCODE Processing Pipeline 8882cf9531b4d748d7b57d80e7d4a72d https://www.encodeproject.org/files/ENCFF541WBX/@@download/ENCFF541WBX.bam hg19 released missing genetic modification characterization ENCFF084TWW bam alignments ENCSR239ZLZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-FOSL1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 50 ENCFF429QSN, ENCFF645REX, ENCFF807MUK 1366860714 ENCODE Processing Pipeline 6dd909888cd14107694a1e270d5063b4 https://www.encodeproject.org/files/ENCFF084TWW/@@download/ENCFF084TWW.bam hg19 released missing genetic modification characterization ENCFF111LCG bigWig signal p-value ENCSR239ZLZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-FOSL1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF449ZQF, ENCFF541WBX 753075726 ENCODE Processing Pipeline 48e29f75ffd9d566dd4d2797cffc2c2b https://www.encodeproject.org/files/ENCFF111LCG/@@download/ENCFF111LCG.bigWig hg19 released missing genetic modification characterization ENCFF159BJW bigWig signal p-value ENCSR239ZLZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-FOSL1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF084TWW, ENCFF449ZQF 712443844 ENCODE Processing Pipeline fd7e2cbc867682f866624d4cf63a6aae https://www.encodeproject.org/files/ENCFF159BJW/@@download/ENCFF159BJW.bigWig hg19 released missing genetic modification characterization ENCFF495CRT bigWig signal p-value ENCSR239ZLZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-FOSL1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF084TWW, ENCFF449ZQF, ENCFF541WBX 762864408 ENCODE Processing Pipeline 861cf5ccecf08b04afd16b3713b09ea6 https://www.encodeproject.org/files/ENCFF495CRT/@@download/ENCFF495CRT.bigWig hg19 released missing genetic modification characterization ENCFF682TPV bigWig fold change over control ENCSR239ZLZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-FOSL1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF084TWW, ENCFF449ZQF 704496180 ENCODE Processing Pipeline f24ade44b23d595ba3fb9952e2742628 https://www.encodeproject.org/files/ENCFF682TPV/@@download/ENCFF682TPV.bigWig hg19 released missing genetic modification characterization ENCFF236LWZ bigWig fold change over control ENCSR239ZLZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-FOSL1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF449ZQF, ENCFF541WBX 746033008 ENCODE Processing Pipeline 1b124833cf0962aaece8018c784666e9 https://www.encodeproject.org/files/ENCFF236LWZ/@@download/ENCFF236LWZ.bigWig hg19 released missing genetic modification characterization ENCFF554DIU bigWig fold change over control ENCSR239ZLZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-FOSL1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF084TWW, ENCFF449ZQF, ENCFF541WBX 1108199497 ENCODE Processing Pipeline d3b39069c31f581b1f3a005b18984c8e https://www.encodeproject.org/files/ENCFF554DIU/@@download/ENCFF554DIU.bigWig hg19 released missing genetic modification characterization ENCFF877UDE bed narrowPeak peaks ENCSR239ZLZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-FOSL1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF084TWW, ENCFF449ZQF 7097868 ENCODE Processing Pipeline 1f01fb0e9e35b80561efe31a723b097c https://www.encodeproject.org/files/ENCFF877UDE/@@download/ENCFF877UDE.bed.gz hg19 released missing genetic modification characterization ENCFF263WAY bigBed narrowPeak peaks ENCSR239ZLZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-FOSL1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF912QBK 12824993 ENCODE Processing Pipeline 41072e753a9928e5130e3a5feec820c1 https://www.encodeproject.org/files/ENCFF263WAY/@@download/ENCFF263WAY.bigBed hg19 released missing genetic modification characterization ENCFF862BHV bigBed narrowPeak peaks ENCSR239ZLZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-FOSL1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF877UDE 12243417 ENCODE Processing Pipeline 7c3c67c53ad34260d799d289e6a5f46c https://www.encodeproject.org/files/ENCFF862BHV/@@download/ENCFF862BHV.bigBed hg19 released missing genetic modification characterization ENCFF912QBK bed narrowPeak peaks ENCSR239ZLZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-FOSL1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF449ZQF, ENCFF541WBX 6980795 ENCODE Processing Pipeline ec15f630d11debe6ea971d6126e6d6a1 https://www.encodeproject.org/files/ENCFF912QBK/@@download/ENCFF912QBK.bed.gz hg19 released missing genetic modification characterization ENCFF907RDS bed narrowPeak peaks ENCSR239ZLZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-FOSL1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF084TWW, ENCFF449ZQF, ENCFF541WBX 7145428 ENCODE Processing Pipeline 0de3b8264eb4bebc43b82ec2422a9bc3 https://www.encodeproject.org/files/ENCFF907RDS/@@download/ENCFF907RDS.bed.gz hg19 released missing genetic modification characterization ENCFF631TRD bigBed narrowPeak peaks ENCSR239ZLZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-FOSL1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF907RDS 12444212 ENCODE Processing Pipeline 6c17eb264439e34fa91a7aaa709efd44 https://www.encodeproject.org/files/ENCFF631TRD/@@download/ENCFF631TRD.bigBed hg19 released missing genetic modification characterization ENCFF924JMI bam unfiltered alignments ENCSR239ZLZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-FOSL1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 50 ENCFF429QSN, ENCFF643CGH, ENCFF645REX 1855650078 ENCODE Processing Pipeline 3b0b6570d90394496e899deeb44d8b05 https://www.encodeproject.org/files/ENCFF924JMI/@@download/ENCFF924JMI.bam GRCh38 released missing genetic modification characterization ENCFF291ZZD bam unfiltered alignments ENCSR239ZLZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-FOSL1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 50 ENCFF253CXQ, ENCFF381IRT, ENCFF643CGH 2041430542 ENCODE Processing Pipeline b2fb539f23ff4fc0ccb01698911296e2 https://www.encodeproject.org/files/ENCFF291ZZD/@@download/ENCFF291ZZD.bam GRCh38 released missing genetic modification characterization ENCFF581AZU bam alignments ENCSR239ZLZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-FOSL1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 50 ENCFF429QSN, ENCFF643CGH, ENCFF645REX 1366161373 ENCODE Processing Pipeline 5f96fe857dd7a08040bfbf2f6817eb44 https://www.encodeproject.org/files/ENCFF581AZU/@@download/ENCFF581AZU.bam GRCh38 released missing genetic modification characterization ENCFF500HFO bam alignments ENCSR239ZLZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-FOSL1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 50 ENCFF253CXQ, ENCFF381IRT, ENCFF643CGH 1505923252 ENCODE Processing Pipeline 8cb541c3b2ed9c35903cf275e07465f5 https://www.encodeproject.org/files/ENCFF500HFO/@@download/ENCFF500HFO.bam GRCh38 released missing genetic modification characterization ENCFF213JFZ bigWig signal p-value ENCSR239ZLZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-FOSL1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF036ZLP, ENCFF581AZU 635609632 ENCODE Processing Pipeline ea15443d03a6788e77daabb0b9967783 https://www.encodeproject.org/files/ENCFF213JFZ/@@download/ENCFF213JFZ.bigWig GRCh38 released missing genetic modification characterization ENCFF377RNP bigWig signal p-value ENCSR239ZLZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-FOSL1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF036ZLP, ENCFF500HFO 755964114 ENCODE Processing Pipeline c5260f33844418a93cece171a93c5f4e https://www.encodeproject.org/files/ENCFF377RNP/@@download/ENCFF377RNP.bigWig GRCh38 released missing genetic modification characterization ENCFF828VGK bigWig fold change over control ENCSR239ZLZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-FOSL1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF036ZLP, ENCFF581AZU 702283100 ENCODE Processing Pipeline 8f42cf6f4f1533ff5603a1423a570833 https://www.encodeproject.org/files/ENCFF828VGK/@@download/ENCFF828VGK.bigWig GRCh38 released missing genetic modification characterization ENCFF400NLF bigWig signal p-value ENCSR239ZLZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-FOSL1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF036ZLP, ENCFF500HFO, ENCFF581AZU 756450036 ENCODE Processing Pipeline 706356791f121d755fb0b256d8d0adf2 https://www.encodeproject.org/files/ENCFF400NLF/@@download/ENCFF400NLF.bigWig GRCh38 released missing genetic modification characterization ENCFF887ADK bigWig fold change over control ENCSR239ZLZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-FOSL1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF036ZLP, ENCFF500HFO 749340200 ENCODE Processing Pipeline 62f303aa8b90c4513d40913f3976bc13 https://www.encodeproject.org/files/ENCFF887ADK/@@download/ENCFF887ADK.bigWig GRCh38 released missing genetic modification characterization ENCFF094CHG bigWig fold change over control ENCSR239ZLZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-FOSL1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF036ZLP, ENCFF500HFO, ENCFF581AZU 1095136008 ENCODE Processing Pipeline 49693d0f23cefc0314ebdf80468046bc https://www.encodeproject.org/files/ENCFF094CHG/@@download/ENCFF094CHG.bigWig GRCh38 released missing genetic modification characterization ENCFF841ZQQ bed narrowPeak peaks ENCSR239ZLZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-FOSL1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF036ZLP, ENCFF581AZU 7128004 ENCODE Processing Pipeline 826f1a951220c3ac77efce9e36ea72f7 https://www.encodeproject.org/files/ENCFF841ZQQ/@@download/ENCFF841ZQQ.bed.gz GRCh38 released missing genetic modification characterization ENCFF485TYY bed narrowPeak peaks ENCSR239ZLZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-FOSL1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF036ZLP, ENCFF500HFO, ENCFF581AZU 7125075 ENCODE Processing Pipeline b0b96acc2cfe84043baf8a6f0fd038f4 https://www.encodeproject.org/files/ENCFF485TYY/@@download/ENCFF485TYY.bed.gz GRCh38 released missing genetic modification characterization ENCFF170SAA bed narrowPeak peaks ENCSR239ZLZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-FOSL1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF036ZLP, ENCFF500HFO 6902417 ENCODE Processing Pipeline 21db5386ed2abe867291b313c4f707e1 https://www.encodeproject.org/files/ENCFF170SAA/@@download/ENCFF170SAA.bed.gz GRCh38 released missing genetic modification characterization ENCFF599SGV bigBed narrowPeak peaks ENCSR239ZLZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-FOSL1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF841ZQQ 12353611 ENCODE Processing Pipeline 57bf09bb166b88a5270296c55f295430 https://www.encodeproject.org/files/ENCFF599SGV/@@download/ENCFF599SGV.bigBed GRCh38 released missing genetic modification characterization ENCFF744SJI bigBed narrowPeak peaks ENCSR239ZLZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-FOSL1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF170SAA 12827718 ENCODE Processing Pipeline 0cbd6cb0be9816517c2f1169cf6ffe22 https://www.encodeproject.org/files/ENCFF744SJI/@@download/ENCFF744SJI.bigBed GRCh38 released missing genetic modification characterization ENCFF425FAW bigBed narrowPeak peaks ENCSR239ZLZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-FOSL1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF485TYY 12439453 ENCODE Processing Pipeline f0c17452871ba058640244beb7aa8ec9 https://www.encodeproject.org/files/ENCFF425FAW/@@download/ENCFF425FAW.bigBed GRCh38 released missing genetic modification characterization ENCFF151FYK bed narrowPeak optimal idr thresholded peaks ENCSR239ZLZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-FOSL1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF170SAA, ENCFF419RSJ, ENCFF485TYY, ENCFF841ZQQ 1038336 ENCODE Processing Pipeline 34f8bcf3bfb337549b4d8b50e7573a8d https://www.encodeproject.org/files/ENCFF151FYK/@@download/ENCFF151FYK.bed.gz GRCh38 released missing genetic modification characterization ENCFF595YQB bigBed narrowPeak optimal idr thresholded peaks ENCSR239ZLZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-FOSL1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF151FYK 2042835 ENCODE Processing Pipeline 28a4f738d0f2fe375de2ac9e34d9f44f https://www.encodeproject.org/files/ENCFF595YQB/@@download/ENCFF595YQB.bigBed GRCh38 released missing genetic modification characterization ENCFF820EPO bigBed narrowPeak optimal idr thresholded peaks ENCSR239ZLZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-FOSL1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF692PVV 1873946 ENCODE Processing Pipeline d6f1bd52cf27126eb1f2e79119f6c2fe https://www.encodeproject.org/files/ENCFF820EPO/@@download/ENCFF820EPO.bigBed hg19 released missing genetic modification characterization ENCFF692PVV bed narrowPeak optimal idr thresholded peaks ENCSR239ZLZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-FOSL1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF001TDO, ENCFF877UDE, ENCFF907RDS, ENCFF912QBK 923866 ENCODE Processing Pipeline 04a0cb049ff73ba89ee706b1951ff137 https://www.encodeproject.org/files/ENCFF692PVV/@@download/ENCFF692PVV.bed.gz hg19 released missing genetic modification characterization ENCFF891VEX fastq reads ENCSR724GSW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SAFB2-human ENCAB303CHK DNA SDS formaldehyde False 2018-01-26 ENCODE 1 1 40 single-ended 423746811 Xiang-Dong Fu, UCSD a874c228e664bd8383fbf68cb482f579 https://www.encodeproject.org/files/ENCFF891VEX/@@download/ENCFF891VEX.fastq.gz Illumina HiSeq 2000 /files/ENCFF577LLL/ released borderline replicate concordance, low read depth, low read length, moderate library complexity experiment not submitted to GEO severe bottlenecking ENCFF354BZE fastq reads ENCSR724GSW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SAFB2-human ENCAB303CHK DNA SDS formaldehyde False 2018-01-26 ENCODE 2 1 40 single-ended 326323834 Xiang-Dong Fu, UCSD 9deadb71cb1fb8c1df8fc1cb5508f83e https://www.encodeproject.org/files/ENCFF354BZE/@@download/ENCFF354BZE.fastq.gz Illumina HiSeq 2000 /files/ENCFF363JFD/ released borderline replicate concordance, low read depth, low read length, moderate library complexity experiment not submitted to GEO severe bottlenecking ENCFF947BQU bam unfiltered alignments ENCSR724GSW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SAFB2-human ENCAB303CHK DNA SDS formaldehyde False 2018-01-26 ENCODE 1 ENCFF643CGH, ENCFF891VEX 621777899 ENCODE Processing Pipeline 25b03a7e3d1906bbf25c1e6f49f90c76 https://www.encodeproject.org/files/ENCFF947BQU/@@download/ENCFF947BQU.bam GRCh38 released borderline replicate concordance, low read depth, low read length, moderate library complexity experiment not submitted to GEO severe bottlenecking ENCFF718POT bam alignments ENCSR724GSW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SAFB2-human ENCAB303CHK DNA SDS formaldehyde False 2018-01-26 ENCODE 1 ENCFF643CGH, ENCFF891VEX 473003679 ENCODE Processing Pipeline 56d12fa7b790908c9f29fa0233fab7f7 https://www.encodeproject.org/files/ENCFF718POT/@@download/ENCFF718POT.bam GRCh38 released borderline replicate concordance, low read depth, low read length, moderate library complexity experiment not submitted to GEO severe bottlenecking ENCFF870TNG fastq reads ENCSR724GSW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SAFB2-human ENCAB303CHK DNA SDS formaldehyde False 2018-01-26 ENCODE 2 1 40 single-ended 572119148 Xiang-Dong Fu, UCSD 10575c2f31e1625bddc83da65e706a1a https://www.encodeproject.org/files/ENCFF870TNG/@@download/ENCFF870TNG.fastq.gz Illumina HiSeq 2000 /files/ENCFF363JFD/ released borderline replicate concordance, low read depth, low read length, moderate library complexity experiment not submitted to GEO severe bottlenecking ENCFF431ABA bam alignments ENCSR724GSW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SAFB2-human ENCAB303CHK DNA SDS formaldehyde False 2018-01-26 ENCODE 1 40 ENCFF807MUK, ENCFF891VEX 473462771 ENCODE Processing Pipeline 70a2031dd1d76a5e789c9ff7786321f0 https://www.encodeproject.org/files/ENCFF431ABA/@@download/ENCFF431ABA.bam hg19 released borderline replicate concordance, low read depth, low read length, moderate library complexity experiment not submitted to GEO severe bottlenecking ENCFF235PFI bam unfiltered alignments ENCSR724GSW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SAFB2-human ENCAB303CHK DNA SDS formaldehyde False 2018-01-26 ENCODE 1 40 ENCFF807MUK, ENCFF891VEX 619549250 ENCODE Processing Pipeline 3f3ec22e27f6d09ee4d22571125640ad https://www.encodeproject.org/files/ENCFF235PFI/@@download/ENCFF235PFI.bam hg19 released borderline replicate concordance, low read depth, low read length, moderate library complexity experiment not submitted to GEO severe bottlenecking ENCFF158QPY bam unfiltered alignments ENCSR724GSW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SAFB2-human ENCAB303CHK DNA SDS formaldehyde False 2018-01-26 ENCODE 2 40 ENCFF354BZE, ENCFF643CGH, ENCFF870TNG 925959275 ENCODE Processing Pipeline ff5e41ecb685c94afac300eb25fd8e8e https://www.encodeproject.org/files/ENCFF158QPY/@@download/ENCFF158QPY.bam GRCh38 released borderline replicate concordance, low read depth, low read length, moderate library complexity experiment not submitted to GEO severe bottlenecking ENCFF296ZWJ bam alignments ENCSR724GSW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SAFB2-human ENCAB303CHK DNA SDS formaldehyde False 2018-01-26 ENCODE 2 40 ENCFF354BZE, ENCFF643CGH, ENCFF870TNG 555828893 ENCODE Processing Pipeline dc52fdd5a3e38bbf4482a0d6d39a0d34 https://www.encodeproject.org/files/ENCFF296ZWJ/@@download/ENCFF296ZWJ.bam GRCh38 released borderline replicate concordance, low read depth, low read length, moderate library complexity experiment not submitted to GEO severe bottlenecking ENCFF055JSH bam unfiltered alignments ENCSR724GSW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SAFB2-human ENCAB303CHK DNA SDS formaldehyde False 2018-01-26 ENCODE 2 40 ENCFF354BZE, ENCFF807MUK, ENCFF870TNG 921115020 ENCODE Processing Pipeline 65f7186c33e0d88552fdacdc57772258 https://www.encodeproject.org/files/ENCFF055JSH/@@download/ENCFF055JSH.bam hg19 released borderline replicate concordance, low read depth, low read length, moderate library complexity experiment not submitted to GEO severe bottlenecking ENCFF836GWP bam alignments ENCSR724GSW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SAFB2-human ENCAB303CHK DNA SDS formaldehyde False 2018-01-26 ENCODE 2 40 ENCFF354BZE, ENCFF807MUK, ENCFF870TNG 556365235 ENCODE Processing Pipeline 85f7199386dca476d701e10372c18941 https://www.encodeproject.org/files/ENCFF836GWP/@@download/ENCFF836GWP.bam hg19 released borderline replicate concordance, low read depth, low read length, moderate library complexity experiment not submitted to GEO severe bottlenecking ENCFF693ISH bigWig signal p-value ENCSR724GSW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SAFB2-human ENCAB303CHK DNA SDS formaldehyde False 2018-01-26 ENCODE 1 ENCFF120YSP, ENCFF718POT 611932185 ENCODE Processing Pipeline 11fc51a8542434ea7c17db2ab2bc904d https://www.encodeproject.org/files/ENCFF693ISH/@@download/ENCFF693ISH.bigWig GRCh38 released borderline replicate concordance, low read depth, low read length, moderate library complexity experiment not submitted to GEO severe bottlenecking ENCFF578HVU bigWig signal p-value ENCSR724GSW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SAFB2-human ENCAB303CHK DNA SDS formaldehyde False 2018-01-26 ENCODE 1, 2 ENCFF120YSP, ENCFF296ZWJ, ENCFF718POT, ENCFF906SAI 1175361995 ENCODE Processing Pipeline d7fa6ac259fd2bdecad3370cdc761eac https://www.encodeproject.org/files/ENCFF578HVU/@@download/ENCFF578HVU.bigWig GRCh38 released borderline replicate concordance, low read depth, low read length, moderate library complexity experiment not submitted to GEO severe bottlenecking ENCFF205ESY bed narrowPeak peaks ENCSR724GSW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SAFB2-human ENCAB303CHK DNA SDS formaldehyde False 2018-01-26 ENCODE 2 ENCFF296ZWJ, ENCFF906SAI 5569732 ENCODE Processing Pipeline ab8e5b653baa80f1800a9be88039130e https://www.encodeproject.org/files/ENCFF205ESY/@@download/ENCFF205ESY.bed.gz GRCh38 released borderline replicate concordance, low read depth, low read length, moderate library complexity experiment not submitted to GEO severe bottlenecking ENCFF261XZU bigWig signal p-value ENCSR724GSW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SAFB2-human ENCAB303CHK DNA SDS formaldehyde False 2018-01-26 ENCODE 1 ENCFF431ABA, ENCFF493QSH 569329327 ENCODE Processing Pipeline 8a159524ceeedc50f06971c6a0e26e06 https://www.encodeproject.org/files/ENCFF261XZU/@@download/ENCFF261XZU.bigWig hg19 released borderline replicate concordance, low read depth, low read length, moderate library complexity experiment not submitted to GEO severe bottlenecking ENCFF453RAE bigWig fold change over control ENCSR724GSW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SAFB2-human ENCAB303CHK DNA SDS formaldehyde False 2018-01-26 ENCODE 1 ENCFF120YSP, ENCFF718POT 377447304 ENCODE Processing Pipeline 7c62a4fa8a02d96584298da33c59afd5 https://www.encodeproject.org/files/ENCFF453RAE/@@download/ENCFF453RAE.bigWig GRCh38 released borderline replicate concordance, low read depth, low read length, moderate library complexity experiment not submitted to GEO severe bottlenecking ENCFF967TCR bigWig fold change over control ENCSR724GSW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SAFB2-human ENCAB303CHK DNA SDS formaldehyde False 2018-01-26 ENCODE 1 ENCFF431ABA, ENCFF493QSH 378114644 ENCODE Processing Pipeline 50805b54db8a2da86ff2d223d031ca56 https://www.encodeproject.org/files/ENCFF967TCR/@@download/ENCFF967TCR.bigWig hg19 released borderline replicate concordance, low read depth, low read length, moderate library complexity experiment not submitted to GEO severe bottlenecking ENCFF935TOG bigWig signal p-value ENCSR724GSW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SAFB2-human ENCAB303CHK DNA SDS formaldehyde False 2018-01-26 ENCODE 2 ENCFF296ZWJ, ENCFF906SAI 583511447 ENCODE Processing Pipeline f73ef020531f9b431d678352c1b039ac https://www.encodeproject.org/files/ENCFF935TOG/@@download/ENCFF935TOG.bigWig GRCh38 released borderline replicate concordance, low read depth, low read length, moderate library complexity experiment not submitted to GEO severe bottlenecking ENCFF483ZUG bigWig signal p-value ENCSR724GSW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SAFB2-human ENCAB303CHK DNA SDS formaldehyde False 2018-01-26 ENCODE 2 ENCFF641CEP, ENCFF836GWP 700932693 ENCODE Processing Pipeline 86fbf225d42b0118dac685858251040c https://www.encodeproject.org/files/ENCFF483ZUG/@@download/ENCFF483ZUG.bigWig hg19 released borderline replicate concordance, low read depth, low read length, moderate library complexity experiment not submitted to GEO severe bottlenecking ENCFF901ISZ bigWig signal p-value ENCSR724GSW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SAFB2-human ENCAB303CHK DNA SDS formaldehyde False 2018-01-26 ENCODE 1, 2 ENCFF431ABA, ENCFF493QSH, ENCFF641CEP, ENCFF836GWP 1061978656 ENCODE Processing Pipeline ceafb54789e67a3bda81adcd50f30f5e https://www.encodeproject.org/files/ENCFF901ISZ/@@download/ENCFF901ISZ.bigWig hg19 released borderline replicate concordance, low read depth, low read length, moderate library complexity experiment not submitted to GEO severe bottlenecking ENCFF381VGS bigWig fold change over control ENCSR724GSW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SAFB2-human ENCAB303CHK DNA SDS formaldehyde False 2018-01-26 ENCODE 2 ENCFF296ZWJ, ENCFF906SAI 462136525 ENCODE Processing Pipeline 946e822b774faa8f8e0cabd40f09846a https://www.encodeproject.org/files/ENCFF381VGS/@@download/ENCFF381VGS.bigWig GRCh38 released borderline replicate concordance, low read depth, low read length, moderate library complexity experiment not submitted to GEO severe bottlenecking ENCFF508ELS bigWig fold change over control ENCSR724GSW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SAFB2-human ENCAB303CHK DNA SDS formaldehyde False 2018-01-26 ENCODE 2 ENCFF641CEP, ENCFF836GWP 449589706 ENCODE Processing Pipeline 312b9ce5732a5a7607702b1b41b63296 https://www.encodeproject.org/files/ENCFF508ELS/@@download/ENCFF508ELS.bigWig hg19 released borderline replicate concordance, low read depth, low read length, moderate library complexity experiment not submitted to GEO severe bottlenecking ENCFF429QIM bigWig fold change over control ENCSR724GSW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SAFB2-human ENCAB303CHK DNA SDS formaldehyde False 2018-01-26 ENCODE 1, 2 ENCFF120YSP, ENCFF296ZWJ, ENCFF718POT, ENCFF906SAI 976303070 ENCODE Processing Pipeline e4dde741f751d353d5e7c78bcfd28d25 https://www.encodeproject.org/files/ENCFF429QIM/@@download/ENCFF429QIM.bigWig GRCh38 released borderline replicate concordance, low read depth, low read length, moderate library complexity experiment not submitted to GEO severe bottlenecking ENCFF041ZBZ bed narrowPeak peaks ENCSR724GSW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SAFB2-human ENCAB303CHK DNA SDS formaldehyde False 2018-01-26 ENCODE 1 ENCFF120YSP, ENCFF718POT 5037390 ENCODE Processing Pipeline f11660a2a0c08d09a3a97d770e13f99a https://www.encodeproject.org/files/ENCFF041ZBZ/@@download/ENCFF041ZBZ.bed.gz GRCh38 released borderline replicate concordance, low read depth, low read length, moderate library complexity experiment not submitted to GEO severe bottlenecking ENCFF613RZP bed narrowPeak peaks ENCSR724GSW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SAFB2-human ENCAB303CHK DNA SDS formaldehyde False 2018-01-26 ENCODE 1, 2 ENCFF120YSP, ENCFF296ZWJ, ENCFF718POT, ENCFF906SAI 6648104 ENCODE Processing Pipeline 76380b8c120ca362a3aee9b8cf4c6bdc https://www.encodeproject.org/files/ENCFF613RZP/@@download/ENCFF613RZP.bed.gz GRCh38 released borderline replicate concordance, low read depth, low read length, moderate library complexity experiment not submitted to GEO severe bottlenecking ENCFF408SHD bigWig fold change over control ENCSR724GSW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SAFB2-human ENCAB303CHK DNA SDS formaldehyde False 2018-01-26 ENCODE 1, 2 ENCFF431ABA, ENCFF493QSH, ENCFF641CEP, ENCFF836GWP 981987990 ENCODE Processing Pipeline 1ccac345e35473ae48e1e5712d69fde5 https://www.encodeproject.org/files/ENCFF408SHD/@@download/ENCFF408SHD.bigWig hg19 released borderline replicate concordance, low read depth, low read length, moderate library complexity experiment not submitted to GEO severe bottlenecking ENCFF127FJQ bigBed narrowPeak peaks ENCSR724GSW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SAFB2-human ENCAB303CHK DNA SDS formaldehyde False 2018-01-26 ENCODE 1 ENCFF041ZBZ 11068007 ENCODE Processing Pipeline 10e0b70629ff94906eee1f80d229f810 https://www.encodeproject.org/files/ENCFF127FJQ/@@download/ENCFF127FJQ.bigBed GRCh38 released borderline replicate concordance, low read depth, low read length, moderate library complexity experiment not submitted to GEO severe bottlenecking ENCFF959WTR bigBed narrowPeak peaks ENCSR724GSW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SAFB2-human ENCAB303CHK DNA SDS formaldehyde False 2018-01-26 ENCODE 2 ENCFF205ESY 13402834 ENCODE Processing Pipeline 0d0cc9b956c29b87d3bb8ee3f8da7d2c https://www.encodeproject.org/files/ENCFF959WTR/@@download/ENCFF959WTR.bigBed GRCh38 released borderline replicate concordance, low read depth, low read length, moderate library complexity experiment not submitted to GEO severe bottlenecking ENCFF529MBH bigBed narrowPeak peaks ENCSR724GSW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SAFB2-human ENCAB303CHK DNA SDS formaldehyde False 2018-01-26 ENCODE 1, 2 ENCFF613RZP 13481772 ENCODE Processing Pipeline 7dd7eb17e40584efcb9f206616f6b0fb https://www.encodeproject.org/files/ENCFF529MBH/@@download/ENCFF529MBH.bigBed GRCh38 released borderline replicate concordance, low read depth, low read length, moderate library complexity experiment not submitted to GEO severe bottlenecking ENCFF797QCH bed narrowPeak conservative idr thresholded peaks ENCSR724GSW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SAFB2-human ENCAB303CHK DNA SDS formaldehyde False 2018-01-26 ENCODE 1, 2 ENCFF041ZBZ, ENCFF205ESY, ENCFF419RSJ, ENCFF613RZP 1279 ENCODE Processing Pipeline 1c9b27598c1a0e5c96d6c6bbf27fd19b https://www.encodeproject.org/files/ENCFF797QCH/@@download/ENCFF797QCH.bed.gz GRCh38 released borderline replicate concordance, low read depth, low read length, moderate library complexity experiment not submitted to GEO severe bottlenecking ENCFF985UBC bed narrowPeak peaks ENCSR724GSW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SAFB2-human ENCAB303CHK DNA SDS formaldehyde False 2018-01-26 ENCODE 1 ENCFF431ABA, ENCFF493QSH 5134983 ENCODE Processing Pipeline f1e0151dfd8b40fec2933c296e70c153 https://www.encodeproject.org/files/ENCFF985UBC/@@download/ENCFF985UBC.bed.gz hg19 released borderline replicate concordance, low read depth, low read length, moderate library complexity experiment not submitted to GEO severe bottlenecking ENCFF901DAD bigBed narrowPeak conservative idr thresholded peaks ENCSR724GSW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SAFB2-human ENCAB303CHK DNA SDS formaldehyde False 2018-01-26 ENCODE 1, 2 ENCFF797QCH 76462 ENCODE Processing Pipeline d94da8b9eabce21ad694d5d8a9411a4c https://www.encodeproject.org/files/ENCFF901DAD/@@download/ENCFF901DAD.bigBed GRCh38 released borderline replicate concordance, low read depth, low read length, moderate library complexity experiment not submitted to GEO severe bottlenecking ENCFF994WPN bed narrowPeak peaks ENCSR724GSW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SAFB2-human ENCAB303CHK DNA SDS formaldehyde False 2018-01-26 ENCODE 2 ENCFF641CEP, ENCFF836GWP 5649219 ENCODE Processing Pipeline dd83f69db7a21a6d64dcf79127463941 https://www.encodeproject.org/files/ENCFF994WPN/@@download/ENCFF994WPN.bed.gz hg19 released borderline replicate concordance, low read depth, low read length, moderate library complexity experiment not submitted to GEO severe bottlenecking ENCFF087DKT bed narrowPeak optimal idr thresholded peaks ENCSR724GSW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SAFB2-human ENCAB303CHK DNA SDS formaldehyde False 2018-01-26 ENCODE 1, 2 ENCFF041ZBZ, ENCFF205ESY, ENCFF419RSJ, ENCFF613RZP 1596 ENCODE Processing Pipeline aaa4cd7a511a2274573a57a5586295e8 https://www.encodeproject.org/files/ENCFF087DKT/@@download/ENCFF087DKT.bed.gz GRCh38 released borderline replicate concordance, low read depth, low read length, moderate library complexity experiment not submitted to GEO severe bottlenecking ENCFF462AIJ bed narrowPeak peaks ENCSR724GSW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SAFB2-human ENCAB303CHK DNA SDS formaldehyde False 2018-01-26 ENCODE 1, 2 ENCFF431ABA, ENCFF493QSH, ENCFF641CEP, ENCFF836GWP 6719439 ENCODE Processing Pipeline 634223dff2b5675f4d36b99a6a81cf23 https://www.encodeproject.org/files/ENCFF462AIJ/@@download/ENCFF462AIJ.bed.gz hg19 released borderline replicate concordance, low read depth, low read length, moderate library complexity experiment not submitted to GEO severe bottlenecking ENCFF548GKJ bigBed narrowPeak optimal idr thresholded peaks ENCSR724GSW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SAFB2-human ENCAB303CHK DNA SDS formaldehyde False 2018-01-26 ENCODE 1, 2 ENCFF087DKT 78556 ENCODE Processing Pipeline 03b1d3bc23da0098d9c57392fd2398a4 https://www.encodeproject.org/files/ENCFF548GKJ/@@download/ENCFF548GKJ.bigBed GRCh38 released borderline replicate concordance, low read depth, low read length, moderate library complexity experiment not submitted to GEO severe bottlenecking ENCFF827IBM bigBed narrowPeak peaks ENCSR724GSW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SAFB2-human ENCAB303CHK DNA SDS formaldehyde False 2018-01-26 ENCODE 1 ENCFF985UBC 11098578 ENCODE Processing Pipeline fa8646d980a0b1276de4474ff32f56c0 https://www.encodeproject.org/files/ENCFF827IBM/@@download/ENCFF827IBM.bigBed hg19 released borderline replicate concordance, low read depth, low read length, moderate library complexity experiment not submitted to GEO severe bottlenecking ENCFF624NUZ bed narrowPeak optimal idr thresholded peaks ENCSR724GSW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SAFB2-human ENCAB303CHK DNA SDS formaldehyde False 2018-01-26 ENCODE 1, 2 ENCFF001TDO, ENCFF462AIJ, ENCFF985UBC, ENCFF994WPN 1759 ENCODE Processing Pipeline 97e3f1c99bfc96e62aa8bf37eb565906 https://www.encodeproject.org/files/ENCFF624NUZ/@@download/ENCFF624NUZ.bed.gz hg19 released borderline replicate concordance, low read depth, low read length, moderate library complexity experiment not submitted to GEO severe bottlenecking ENCFF550DYZ bed narrowPeak conservative idr thresholded peaks ENCSR724GSW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SAFB2-human ENCAB303CHK DNA SDS formaldehyde False 2018-01-26 ENCODE 1, 2 ENCFF001TDO, ENCFF462AIJ, ENCFF985UBC, ENCFF994WPN 1274 ENCODE Processing Pipeline 779adb01cef9b25d248c84e3e029663f https://www.encodeproject.org/files/ENCFF550DYZ/@@download/ENCFF550DYZ.bed.gz hg19 released borderline replicate concordance, low read depth, low read length, moderate library complexity experiment not submitted to GEO severe bottlenecking ENCFF265TAY bigBed narrowPeak optimal idr thresholded peaks ENCSR724GSW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SAFB2-human ENCAB303CHK DNA SDS formaldehyde False 2018-01-26 ENCODE 1, 2 ENCFF624NUZ 78413 ENCODE Processing Pipeline 5a848e90e1e034870b2b6183d5c31942 https://www.encodeproject.org/files/ENCFF265TAY/@@download/ENCFF265TAY.bigBed hg19 released borderline replicate concordance, low read depth, low read length, moderate library complexity experiment not submitted to GEO severe bottlenecking ENCFF580LQK bigBed narrowPeak peaks ENCSR724GSW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SAFB2-human ENCAB303CHK DNA SDS formaldehyde False 2018-01-26 ENCODE 2 ENCFF994WPN 13379488 ENCODE Processing Pipeline 4175bd63d661513c67db1f16559b033e https://www.encodeproject.org/files/ENCFF580LQK/@@download/ENCFF580LQK.bigBed hg19 released borderline replicate concordance, low read depth, low read length, moderate library complexity experiment not submitted to GEO severe bottlenecking ENCFF036WSL bigBed narrowPeak peaks ENCSR724GSW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SAFB2-human ENCAB303CHK DNA SDS formaldehyde False 2018-01-26 ENCODE 1, 2 ENCFF462AIJ 13453582 ENCODE Processing Pipeline cab5a87c2a61c6a29ab75982bdfcf88f https://www.encodeproject.org/files/ENCFF036WSL/@@download/ENCFF036WSL.bigBed hg19 released borderline replicate concordance, low read depth, low read length, moderate library complexity experiment not submitted to GEO severe bottlenecking ENCFF520GWJ bigBed narrowPeak conservative idr thresholded peaks ENCSR724GSW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SAFB2-human ENCAB303CHK DNA SDS formaldehyde False 2018-01-26 ENCODE 1, 2 ENCFF550DYZ 23554 ENCODE Processing Pipeline 8657d2078e8e7c80924834910d8a2766 https://www.encodeproject.org/files/ENCFF520GWJ/@@download/ENCFF520GWJ.bigBed hg19 released borderline replicate concordance, low read depth, low read length, moderate library complexity experiment not submitted to GEO severe bottlenecking ENCFF118SMB bam unfiltered alignments ENCSR949NVY ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF639-human ENCAB788TCB DNA False 2018-01-26 ENCODE 1 100 ENCFF654QNS, ENCFF807MUK, ENCFF910ZOL 3962320288 ENCODE Processing Pipeline 06f51b67aa08e9a7472c4c13af59b0b4 https://www.encodeproject.org/files/ENCFF118SMB/@@download/ENCFF118SMB.bam hg19 released borderline replicate concordance, low read depth experiment not submitted to GEO partially characterized antibody ENCFF051DWX bam unfiltered alignments ENCSR949NVY ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF639-human ENCAB788TCB DNA False 2018-01-26 ENCODE 2 100 ENCFF593NHM, ENCFF781IDS, ENCFF807MUK 4860532720 ENCODE Processing Pipeline 05e71a86242109688dbca7e3b62a6b88 https://www.encodeproject.org/files/ENCFF051DWX/@@download/ENCFF051DWX.bam hg19 released borderline replicate concordance, low read depth experiment not submitted to GEO partially characterized antibody ENCFF593NHM fastq reads ENCSR949NVY ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF639-human ENCAB788TCB DNA False 2018-01-26 ENCODE 2 1 100 paired-ended 2 ENCFF781IDS 2294902688 Michael Snyder, Stanford 9308870ec266a5b995027dc96a0948b3 https://www.encodeproject.org/files/ENCFF593NHM/@@download/ENCFF593NHM.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFA/ released borderline replicate concordance, low read depth experiment not submitted to GEO partially characterized antibody ENCFF910ZOL fastq reads ENCSR949NVY ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF639-human ENCAB788TCB DNA False 2018-01-26 ENCODE 1 1 100 paired-ended 1 ENCFF654QNS 1774357558 Michael Snyder, Stanford 56602de7a2472eb8b15a6ab9c5a8201f https://www.encodeproject.org/files/ENCFF910ZOL/@@download/ENCFF910ZOL.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFF/ released borderline replicate concordance, low read depth experiment not submitted to GEO partially characterized antibody ENCFF654QNS fastq reads ENCSR949NVY ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF639-human ENCAB788TCB DNA False 2018-01-26 ENCODE 1 1 100 paired-ended 2 ENCFF910ZOL 1842351601 Michael Snyder, Stanford a56b22c9447b6bb056da0251fd8718b9 https://www.encodeproject.org/files/ENCFF654QNS/@@download/ENCFF654QNS.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFH/ released borderline replicate concordance, low read depth experiment not submitted to GEO partially characterized antibody ENCFF781IDS fastq reads ENCSR949NVY ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF639-human ENCAB788TCB DNA False 2018-01-26 ENCODE 2 1 100 paired-ended 1 ENCFF593NHM 2190830121 Michael Snyder, Stanford 568cd56f3e32d6a2f2e5032570715666 https://www.encodeproject.org/files/ENCFF781IDS/@@download/ENCFF781IDS.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFD/ released borderline replicate concordance, low read depth experiment not submitted to GEO partially characterized antibody ENCFF382EGR bam alignments ENCSR949NVY ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF639-human ENCAB788TCB DNA False 2018-01-26 ENCODE 1 100 ENCFF654QNS, ENCFF807MUK, ENCFF910ZOL 3147576886 ENCODE Processing Pipeline 7a1542925e703d0dd8b33939f2a01609 https://www.encodeproject.org/files/ENCFF382EGR/@@download/ENCFF382EGR.bam hg19 released borderline replicate concordance, low read depth experiment not submitted to GEO partially characterized antibody ENCFF572AJL bam alignments ENCSR949NVY ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF639-human ENCAB788TCB DNA False 2018-01-26 ENCODE 2 100 ENCFF593NHM, ENCFF781IDS, ENCFF807MUK 3880532012 ENCODE Processing Pipeline 2854f0bbb8d2ced78cc7d8208d3dc0fc https://www.encodeproject.org/files/ENCFF572AJL/@@download/ENCFF572AJL.bam hg19 released borderline replicate concordance, low read depth experiment not submitted to GEO partially characterized antibody ENCFF937NHI bigWig signal p-value ENCSR949NVY ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF639-human ENCAB788TCB DNA False 2018-01-26 ENCODE 1 ENCFF382EGR, ENCFF581ZJL 1053294125 ENCODE Processing Pipeline 15f4186cd55297a16459b121311c9f98 https://www.encodeproject.org/files/ENCFF937NHI/@@download/ENCFF937NHI.bigWig hg19 released borderline replicate concordance, low read depth experiment not submitted to GEO partially characterized antibody ENCFF172QSO bigWig signal p-value ENCSR949NVY ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF639-human ENCAB788TCB DNA False 2018-01-26 ENCODE 2 ENCFF051LWI, ENCFF572AJL 1126093449 ENCODE Processing Pipeline 8d6cdf4462b246a7460427e6ded2639a https://www.encodeproject.org/files/ENCFF172QSO/@@download/ENCFF172QSO.bigWig hg19 released borderline replicate concordance, low read depth experiment not submitted to GEO partially characterized antibody ENCFF486EQH bigWig signal p-value ENCSR949NVY ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF639-human ENCAB788TCB DNA False 2018-01-26 ENCODE 1, 2 ENCFF051LWI, ENCFF382EGR, ENCFF572AJL, ENCFF581ZJL 1646860723 ENCODE Processing Pipeline 9c5507623391c3984b65f8dba552db95 https://www.encodeproject.org/files/ENCFF486EQH/@@download/ENCFF486EQH.bigWig hg19 released borderline replicate concordance, low read depth experiment not submitted to GEO partially characterized antibody ENCFF532JVS bigWig fold change over control ENCSR949NVY ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF639-human ENCAB788TCB DNA False 2018-01-26 ENCODE 1 ENCFF382EGR, ENCFF581ZJL 1027936614 ENCODE Processing Pipeline e7016cebaca62d5bff8402c74e169a6a https://www.encodeproject.org/files/ENCFF532JVS/@@download/ENCFF532JVS.bigWig hg19 released borderline replicate concordance, low read depth experiment not submitted to GEO partially characterized antibody ENCFF679CXA bigWig fold change over control ENCSR949NVY ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF639-human ENCAB788TCB DNA False 2018-01-26 ENCODE 2 ENCFF051LWI, ENCFF572AJL 1118179445 ENCODE Processing Pipeline 7cdf1bb182fb4f59df5ea09b2f2e7938 https://www.encodeproject.org/files/ENCFF679CXA/@@download/ENCFF679CXA.bigWig hg19 released borderline replicate concordance, low read depth experiment not submitted to GEO partially characterized antibody ENCFF990HHK bigWig fold change over control ENCSR949NVY ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF639-human ENCAB788TCB DNA False 2018-01-26 ENCODE 1, 2 ENCFF051LWI, ENCFF382EGR, ENCFF572AJL, ENCFF581ZJL 1995683139 ENCODE Processing Pipeline 52a1fa32863ceaee0dbd1ed3fa97136e https://www.encodeproject.org/files/ENCFF990HHK/@@download/ENCFF990HHK.bigWig hg19 released borderline replicate concordance, low read depth experiment not submitted to GEO partially characterized antibody ENCFF755JDJ bed narrowPeak peaks ENCSR949NVY ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF639-human ENCAB788TCB DNA False 2018-01-26 ENCODE 1 ENCFF382EGR, ENCFF581ZJL 6642143 ENCODE Processing Pipeline cac3983772b5e92e19a70e7c9c65c348 https://www.encodeproject.org/files/ENCFF755JDJ/@@download/ENCFF755JDJ.bed.gz hg19 released borderline replicate concordance, low read depth experiment not submitted to GEO partially characterized antibody ENCFF765UQI bed narrowPeak peaks ENCSR949NVY ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF639-human ENCAB788TCB DNA False 2018-01-26 ENCODE 2 ENCFF051LWI, ENCFF572AJL 6943544 ENCODE Processing Pipeline e0584d3c2b4152b57ee1011564dc3c67 https://www.encodeproject.org/files/ENCFF765UQI/@@download/ENCFF765UQI.bed.gz hg19 released borderline replicate concordance, low read depth experiment not submitted to GEO partially characterized antibody ENCFF530RTW bed narrowPeak peaks ENCSR949NVY ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF639-human ENCAB788TCB DNA False 2018-01-26 ENCODE 1, 2 ENCFF051LWI, ENCFF382EGR, ENCFF572AJL, ENCFF581ZJL 7246105 ENCODE Processing Pipeline 749d648811406cb9c58b2dd809531f68 https://www.encodeproject.org/files/ENCFF530RTW/@@download/ENCFF530RTW.bed.gz hg19 released borderline replicate concordance, low read depth experiment not submitted to GEO partially characterized antibody ENCFF908OPW bigBed narrowPeak peaks ENCSR949NVY ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF639-human ENCAB788TCB DNA False 2018-01-26 ENCODE 1 ENCFF755JDJ 13316864 ENCODE Processing Pipeline 125e368f5d0b9ea99d3ae9dcac9fbfde https://www.encodeproject.org/files/ENCFF908OPW/@@download/ENCFF908OPW.bigBed hg19 released borderline replicate concordance, low read depth experiment not submitted to GEO partially characterized antibody ENCFF778KYW bigBed narrowPeak peaks ENCSR949NVY ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF639-human ENCAB788TCB DNA False 2018-01-26 ENCODE 1, 2 ENCFF530RTW 13141113 ENCODE Processing Pipeline 04d188eb296816a901a90d99eb3d0ae5 https://www.encodeproject.org/files/ENCFF778KYW/@@download/ENCFF778KYW.bigBed hg19 released borderline replicate concordance, low read depth experiment not submitted to GEO partially characterized antibody ENCFF572IYX bigBed narrowPeak peaks ENCSR949NVY ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF639-human ENCAB788TCB DNA False 2018-01-26 ENCODE 2 ENCFF765UQI 13275632 ENCODE Processing Pipeline 46297e14029ca8d0bea7a254e32c002a https://www.encodeproject.org/files/ENCFF572IYX/@@download/ENCFF572IYX.bigBed hg19 released borderline replicate concordance, low read depth experiment not submitted to GEO partially characterized antibody ENCFF360FDG bed narrowPeak conservative idr thresholded peaks ENCSR949NVY ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF639-human ENCAB788TCB DNA False 2018-01-26 ENCODE 1, 2 ENCFF001TDO, ENCFF530RTW, ENCFF755JDJ, ENCFF765UQI 222473 ENCODE Processing Pipeline dba6a936088a59de82750bfac6621490 https://www.encodeproject.org/files/ENCFF360FDG/@@download/ENCFF360FDG.bed.gz hg19 released borderline replicate concordance, low read depth experiment not submitted to GEO partially characterized antibody ENCFF671WXJ bigBed narrowPeak conservative idr thresholded peaks ENCSR949NVY ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF639-human ENCAB788TCB DNA False 2018-01-26 ENCODE 1, 2 ENCFF360FDG 447012 ENCODE Processing Pipeline 9dbead515750e244d8d14671cc14446b https://www.encodeproject.org/files/ENCFF671WXJ/@@download/ENCFF671WXJ.bigBed hg19 released borderline replicate concordance, low read depth experiment not submitted to GEO partially characterized antibody ENCFF708BTH bed narrowPeak optimal idr thresholded peaks ENCSR949NVY ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF639-human ENCAB788TCB DNA False 2018-01-26 ENCODE 1, 2 ENCFF001TDO, ENCFF530RTW, ENCFF755JDJ, ENCFF765UQI 319090 ENCODE Processing Pipeline c398b933bc4c8d8b03045d41ec90fb85 https://www.encodeproject.org/files/ENCFF708BTH/@@download/ENCFF708BTH.bed.gz hg19 released borderline replicate concordance, low read depth experiment not submitted to GEO partially characterized antibody ENCFF896DFT bigBed narrowPeak optimal idr thresholded peaks ENCSR949NVY ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF639-human ENCAB788TCB DNA False 2018-01-26 ENCODE 1, 2 ENCFF708BTH 714099 ENCODE Processing Pipeline f771f8608f4547f3414ac4c7118ddc1e https://www.encodeproject.org/files/ENCFF896DFT/@@download/ENCFF896DFT.bigBed hg19 released borderline replicate concordance, low read depth experiment not submitted to GEO partially characterized antibody ENCFF320WRH bam unfiltered alignments ENCSR949NVY ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF639-human ENCAB788TCB DNA False 2018-01-26 ENCODE 2 100 ENCFF593NHM, ENCFF643CGH, ENCFF781IDS 4862019193 ENCODE Processing Pipeline 5726780632dd0d77ec2cc58717348f9b https://www.encodeproject.org/files/ENCFF320WRH/@@download/ENCFF320WRH.bam GRCh38 released borderline replicate concordance, low read depth experiment not submitted to GEO partially characterized antibody ENCFF985IEI bam unfiltered alignments ENCSR949NVY ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF639-human ENCAB788TCB DNA False 2018-01-26 ENCODE 1 100 ENCFF643CGH, ENCFF654QNS, ENCFF910ZOL 3964145630 ENCODE Processing Pipeline 989db5088b811bc1bba3737c7af4b62a https://www.encodeproject.org/files/ENCFF985IEI/@@download/ENCFF985IEI.bam GRCh38 released borderline replicate concordance, low read depth experiment not submitted to GEO partially characterized antibody ENCFF390IDA bam alignments ENCSR949NVY ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF639-human ENCAB788TCB DNA False 2018-01-26 ENCODE 1 100 ENCFF643CGH, ENCFF654QNS, ENCFF910ZOL 3149534164 ENCODE Processing Pipeline 54b70fef96956bcb5f9ae0a275fb49cd https://www.encodeproject.org/files/ENCFF390IDA/@@download/ENCFF390IDA.bam GRCh38 released borderline replicate concordance, low read depth experiment not submitted to GEO partially characterized antibody ENCFF368KUM bam alignments ENCSR949NVY ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF639-human ENCAB788TCB DNA False 2018-01-26 ENCODE 2 100 ENCFF593NHM, ENCFF643CGH, ENCFF781IDS 3884069079 ENCODE Processing Pipeline 8612bf5ee5feb9bf780532d3958d918e https://www.encodeproject.org/files/ENCFF368KUM/@@download/ENCFF368KUM.bam GRCh38 released borderline replicate concordance, low read depth experiment not submitted to GEO partially characterized antibody ENCFF109MDP bigWig signal p-value ENCSR949NVY ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF639-human ENCAB788TCB DNA False 2018-01-26 ENCODE 1 ENCFF390IDA, ENCFF910IKB 1018204867 ENCODE Processing Pipeline f89f0310322251c33906c8fa8f10e0e8 https://www.encodeproject.org/files/ENCFF109MDP/@@download/ENCFF109MDP.bigWig GRCh38 released borderline replicate concordance, low read depth experiment not submitted to GEO partially characterized antibody ENCFF330LQH bigWig signal p-value ENCSR949NVY ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF639-human ENCAB788TCB DNA False 2018-01-26 ENCODE 2 ENCFF227IZS, ENCFF368KUM 1061753663 ENCODE Processing Pipeline 2383f679522e55e0cd4d880e2590ad88 https://www.encodeproject.org/files/ENCFF330LQH/@@download/ENCFF330LQH.bigWig GRCh38 released borderline replicate concordance, low read depth experiment not submitted to GEO partially characterized antibody ENCFF680HET bigWig signal p-value ENCSR949NVY ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF639-human ENCAB788TCB DNA False 2018-01-26 ENCODE 1, 2 ENCFF227IZS, ENCFF368KUM, ENCFF390IDA, ENCFF910IKB 2037825861 ENCODE Processing Pipeline b13e480de26c03c9281a919240b2749c https://www.encodeproject.org/files/ENCFF680HET/@@download/ENCFF680HET.bigWig GRCh38 released borderline replicate concordance, low read depth experiment not submitted to GEO partially characterized antibody ENCFF997XTE bigWig fold change over control ENCSR949NVY ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF639-human ENCAB788TCB DNA False 2018-01-26 ENCODE 1 ENCFF390IDA, ENCFF910IKB 1030249702 ENCODE Processing Pipeline aafa70e8b26749407b0ac6097934103a https://www.encodeproject.org/files/ENCFF997XTE/@@download/ENCFF997XTE.bigWig GRCh38 released borderline replicate concordance, low read depth experiment not submitted to GEO partially characterized antibody ENCFF555YHQ bigWig fold change over control ENCSR949NVY ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF639-human ENCAB788TCB DNA False 2018-01-26 ENCODE 2 ENCFF227IZS, ENCFF368KUM 1114203404 ENCODE Processing Pipeline 012810c003f070a33fc45cf9c231f8ca https://www.encodeproject.org/files/ENCFF555YHQ/@@download/ENCFF555YHQ.bigWig GRCh38 released borderline replicate concordance, low read depth experiment not submitted to GEO partially characterized antibody ENCFF177SPZ bigWig fold change over control ENCSR949NVY ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF639-human ENCAB788TCB DNA False 2018-01-26 ENCODE 1, 2 ENCFF227IZS, ENCFF368KUM, ENCFF390IDA, ENCFF910IKB 2005478752 ENCODE Processing Pipeline d63ff194004e54e742dabe7a1befce8e https://www.encodeproject.org/files/ENCFF177SPZ/@@download/ENCFF177SPZ.bigWig GRCh38 released borderline replicate concordance, low read depth experiment not submitted to GEO partially characterized antibody ENCFF696NTE bed narrowPeak peaks ENCSR949NVY ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF639-human ENCAB788TCB DNA False 2018-01-26 ENCODE 1 ENCFF390IDA, ENCFF910IKB 6504424 ENCODE Processing Pipeline a5c89753960d9524c7f2f85173ed030a https://www.encodeproject.org/files/ENCFF696NTE/@@download/ENCFF696NTE.bed.gz GRCh38 released borderline replicate concordance, low read depth experiment not submitted to GEO partially characterized antibody ENCFF006QBN bed narrowPeak peaks ENCSR949NVY ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF639-human ENCAB788TCB DNA False 2018-01-26 ENCODE 2 ENCFF227IZS, ENCFF368KUM 6855473 ENCODE Processing Pipeline ff94298f3a06d0edc06b98645735658a https://www.encodeproject.org/files/ENCFF006QBN/@@download/ENCFF006QBN.bed.gz GRCh38 released borderline replicate concordance, low read depth experiment not submitted to GEO partially characterized antibody ENCFF400AJE bed narrowPeak peaks ENCSR949NVY ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF639-human ENCAB788TCB DNA False 2018-01-26 ENCODE 1, 2 ENCFF227IZS, ENCFF368KUM, ENCFF390IDA, ENCFF910IKB 7186506 ENCODE Processing Pipeline 127102417da85b0bd34501a6dd300cc9 https://www.encodeproject.org/files/ENCFF400AJE/@@download/ENCFF400AJE.bed.gz GRCh38 released borderline replicate concordance, low read depth experiment not submitted to GEO partially characterized antibody ENCFF407FUI bigBed narrowPeak peaks ENCSR949NVY ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF639-human ENCAB788TCB DNA False 2018-01-26 ENCODE 1 ENCFF696NTE 13318759 ENCODE Processing Pipeline f15b333dc7b905062c7dde3ba201d570 https://www.encodeproject.org/files/ENCFF407FUI/@@download/ENCFF407FUI.bigBed GRCh38 released borderline replicate concordance, low read depth experiment not submitted to GEO partially characterized antibody ENCFF741BUF bigBed narrowPeak optimal idr thresholded peaks ENCSR949NVY ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF639-human ENCAB788TCB DNA False 2018-01-26 ENCODE 1, 2 ENCFF008JJE 701450 ENCODE Processing Pipeline 8a6cf422bbc9f9dfda23c74abdaee7af https://www.encodeproject.org/files/ENCFF741BUF/@@download/ENCFF741BUF.bigBed GRCh38 released borderline replicate concordance, low read depth experiment not submitted to GEO partially characterized antibody ENCFF210NPY bigBed narrowPeak peaks ENCSR949NVY ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF639-human ENCAB788TCB DNA False 2018-01-26 ENCODE 2 ENCFF006QBN 13279802 ENCODE Processing Pipeline 2a1f96339d7246a221fa0f20513bd33a https://www.encodeproject.org/files/ENCFF210NPY/@@download/ENCFF210NPY.bigBed GRCh38 released borderline replicate concordance, low read depth experiment not submitted to GEO partially characterized antibody ENCFF378XMN bigBed narrowPeak peaks ENCSR949NVY ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF639-human ENCAB788TCB DNA False 2018-01-26 ENCODE 1, 2 ENCFF400AJE 13095080 ENCODE Processing Pipeline 8a90904e98387f630eb8629d5aa09d1d https://www.encodeproject.org/files/ENCFF378XMN/@@download/ENCFF378XMN.bigBed GRCh38 released borderline replicate concordance, low read depth experiment not submitted to GEO partially characterized antibody ENCFF208AKZ bed narrowPeak conservative idr thresholded peaks ENCSR949NVY ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF639-human ENCAB788TCB DNA False 2018-01-26 ENCODE 1, 2 ENCFF006QBN, ENCFF400AJE, ENCFF419RSJ, ENCFF696NTE 209221 ENCODE Processing Pipeline 78e48223f35125a8f6d295e574eb13f7 https://www.encodeproject.org/files/ENCFF208AKZ/@@download/ENCFF208AKZ.bed.gz GRCh38 released borderline replicate concordance, low read depth experiment not submitted to GEO partially characterized antibody ENCFF777PJG bigBed narrowPeak conservative idr thresholded peaks ENCSR949NVY ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF639-human ENCAB788TCB DNA False 2018-01-26 ENCODE 1, 2 ENCFF208AKZ 431569 ENCODE Processing Pipeline 754654800e2b0038ba79ea93a817a0bc https://www.encodeproject.org/files/ENCFF777PJG/@@download/ENCFF777PJG.bigBed GRCh38 released borderline replicate concordance, low read depth experiment not submitted to GEO partially characterized antibody ENCFF008JJE bed narrowPeak optimal idr thresholded peaks ENCSR949NVY ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF639-human ENCAB788TCB DNA False 2018-01-26 ENCODE 1, 2 ENCFF006QBN, ENCFF400AJE, ENCFF419RSJ, ENCFF696NTE 305852 ENCODE Processing Pipeline 27f9539a3aad2ab0b3e625a001f1492d https://www.encodeproject.org/files/ENCFF008JJE/@@download/ENCFF008JJE.bed.gz GRCh38 released borderline replicate concordance, low read depth experiment not submitted to GEO partially characterized antibody ENCFF306MYT fastq reads ENCSR598TIR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF507-human ENCAB728YTO DNA False 2017-02-13 ENCODE 1 1 100 paired-ended 1 ENCFF574SDW 3124163113 Michael Snyder, Stanford e94d28c6de8ecdf690f8a058c09d495b SRA:SRR6213910 https://www.encodeproject.org/files/ENCFF306MYT/@@download/ENCFF306MYT.fastq.gz Illumina HiSeq 4000 /files/ENCFF091IYB/, /files/ENCFF445KUN/ released missing genetic modification characterization ENCFF574SDW fastq reads ENCSR598TIR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF507-human ENCAB728YTO DNA False 2017-02-13 ENCODE 1 1 100 paired-ended 2 ENCFF306MYT 3446870323 Michael Snyder, Stanford e7718fba45d82ae5f9e0241b855c8887 SRA:SRR6213910 https://www.encodeproject.org/files/ENCFF574SDW/@@download/ENCFF574SDW.fastq.gz Illumina HiSeq 4000 /files/ENCFF091IYB/, /files/ENCFF445KUN/ released missing genetic modification characterization ENCFF240EGC fastq reads ENCSR598TIR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF507-human ENCAB728YTO DNA False 2017-02-13 ENCODE 2 1 100 paired-ended 1 ENCFF905PWR 5165603990 Michael Snyder, Stanford 04557400d166d06d29ab7e124e920077 SRA:SRR6213909 https://www.encodeproject.org/files/ENCFF240EGC/@@download/ENCFF240EGC.fastq.gz Illumina HiSeq 4000 /files/ENCFF091IYB/, /files/ENCFF445KUN/ released missing genetic modification characterization ENCFF905PWR fastq reads ENCSR598TIR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF507-human ENCAB728YTO DNA False 2017-02-13 ENCODE 2 1 100 paired-ended 2 ENCFF240EGC 5636140887 Michael Snyder, Stanford 825d0a839a2a94f211bee3ab99f347f2 SRA:SRR6213909 https://www.encodeproject.org/files/ENCFF905PWR/@@download/ENCFF905PWR.fastq.gz Illumina HiSeq 4000 /files/ENCFF091IYB/, /files/ENCFF445KUN/ released missing genetic modification characterization ENCFF156HSL bam unfiltered alignments ENCSR598TIR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF507-human ENCAB728YTO DNA False 2017-02-13 ENCODE 1 100 ENCFF306MYT, ENCFF574SDW, ENCFF643CGH 6764421390 ENCODE Processing Pipeline ab7457f5dc107be50c9a7172ddc350d7 https://www.encodeproject.org/files/ENCFF156HSL/@@download/ENCFF156HSL.bam GRCh38 released missing genetic modification characterization ENCFF579IIE bam unfiltered alignments ENCSR598TIR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF507-human ENCAB728YTO DNA False 2017-02-13 ENCODE 1 100 ENCFF306MYT, ENCFF574SDW, ENCFF807MUK 6744900979 ENCODE Processing Pipeline 194d3d01fc78542aa5f179601d0012bf https://www.encodeproject.org/files/ENCFF579IIE/@@download/ENCFF579IIE.bam hg19 released missing genetic modification characterization ENCFF772UWJ bam alignments ENCSR598TIR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF507-human ENCAB728YTO DNA False 2017-02-13 ENCODE 2 100 ENCFF240EGC, ENCFF643CGH, ENCFF905PWR 7648925729 ENCODE Processing Pipeline bd181453d705203976607e7866bfa97e https://www.encodeproject.org/files/ENCFF772UWJ/@@download/ENCFF772UWJ.bam GRCh38 released missing genetic modification characterization ENCFF606TJM bam alignments ENCSR598TIR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF507-human ENCAB728YTO DNA False 2017-02-13 ENCODE 1 100 ENCFF306MYT, ENCFF574SDW, ENCFF643CGH 4977742897 ENCODE Processing Pipeline 1e37bae506c014aa9e525642c3eed810 https://www.encodeproject.org/files/ENCFF606TJM/@@download/ENCFF606TJM.bam GRCh38 released missing genetic modification characterization ENCFF995EGD bam unfiltered alignments ENCSR598TIR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF507-human ENCAB728YTO DNA False 2017-02-13 ENCODE 2 100 ENCFF240EGC, ENCFF807MUK, ENCFF905PWR 10428605620 ENCODE Processing Pipeline 40f5f6faeefaf066754535bcbdc259dd https://www.encodeproject.org/files/ENCFF995EGD/@@download/ENCFF995EGD.bam hg19 released missing genetic modification characterization ENCFF949SXE bam alignments ENCSR598TIR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF507-human ENCAB728YTO DNA False 2017-02-13 ENCODE 2 100 ENCFF240EGC, ENCFF807MUK, ENCFF905PWR 7641618380 ENCODE Processing Pipeline 54cc212661afec01bee98e3dbd778dae https://www.encodeproject.org/files/ENCFF949SXE/@@download/ENCFF949SXE.bam hg19 released missing genetic modification characterization ENCFF582ETC bam unfiltered alignments ENCSR598TIR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF507-human ENCAB728YTO DNA False 2017-02-13 ENCODE 2 100 ENCFF240EGC, ENCFF643CGH, ENCFF905PWR 10452896772 ENCODE Processing Pipeline 0fdece841cbf00f857c0a67b3fa7578a https://www.encodeproject.org/files/ENCFF582ETC/@@download/ENCFF582ETC.bam GRCh38 released missing genetic modification characterization ENCFF821SUV bam alignments ENCSR598TIR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF507-human ENCAB728YTO DNA False 2017-02-13 ENCODE 1 100 ENCFF306MYT, ENCFF574SDW, ENCFF807MUK 4973965668 ENCODE Processing Pipeline 5d0e9411aa456b724a87cee49d342adb https://www.encodeproject.org/files/ENCFF821SUV/@@download/ENCFF821SUV.bam hg19 released missing genetic modification characterization ENCFF329WKM bigBed narrowPeak peaks ENCSR598TIR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF507-human ENCAB728YTO DNA False 2017-02-13 ENCODE 2 ENCFF211EQN 13135538 ENCODE Processing Pipeline a5d00f1ab9ec9987eda2787185d82d0e https://www.encodeproject.org/files/ENCFF329WKM/@@download/ENCFF329WKM.bigBed hg19 released missing genetic modification characterization ENCFF632WIR bigBed narrowPeak peaks ENCSR598TIR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF507-human ENCAB728YTO DNA False 2017-02-13 ENCODE 1 ENCFF096XNX 13271851 ENCODE Processing Pipeline d0e4400028440d7b7e8211699569a320 https://www.encodeproject.org/files/ENCFF632WIR/@@download/ENCFF632WIR.bigBed hg19 released missing genetic modification characterization ENCFF834WGJ bed narrowPeak optimal idr thresholded peaks ENCSR598TIR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF507-human ENCAB728YTO DNA False 2017-02-13 ENCODE 1, 2 ENCFF001TDO, ENCFF096XNX, ENCFF211EQN, ENCFF396RQL 221226 ENCODE Processing Pipeline 31f39e7e53f6aa68a77cdb6385d89ac6 https://www.encodeproject.org/files/ENCFF834WGJ/@@download/ENCFF834WGJ.bed.gz hg19 released missing genetic modification characterization ENCFF745ZMU bigBed narrowPeak conservative idr thresholded peaks ENCSR598TIR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF507-human ENCAB728YTO DNA False 2017-02-13 ENCODE 1, 2 ENCFF610XQH 488128 ENCODE Processing Pipeline f2637b8ea8d1a2869906d8c6d4ab4abd https://www.encodeproject.org/files/ENCFF745ZMU/@@download/ENCFF745ZMU.bigBed hg19 released missing genetic modification characterization ENCFF759TNJ bigBed narrowPeak optimal idr thresholded peaks ENCSR598TIR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF507-human ENCAB728YTO DNA False 2017-02-13 ENCODE 1, 2 ENCFF834WGJ 516881 ENCODE Processing Pipeline 949482d1218cdcf585d7dc3099c0a111 https://www.encodeproject.org/files/ENCFF759TNJ/@@download/ENCFF759TNJ.bigBed hg19 released missing genetic modification characterization ENCFF667DGO bigWig signal p-value ENCSR598TIR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF507-human ENCAB728YTO DNA False 2017-02-13 ENCODE 1, 2 ENCFF129IXY, ENCFF821SUV, ENCFF949SXE 842605371 ENCODE Processing Pipeline 3b324908b16d05c8126ebb79b2296625 https://www.encodeproject.org/files/ENCFF667DGO/@@download/ENCFF667DGO.bigWig hg19 released missing genetic modification characterization ENCFF257RLI bigWig fold change over control ENCSR598TIR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF507-human ENCAB728YTO DNA False 2017-02-13 ENCODE 2 ENCFF129IXY, ENCFF949SXE 1673280896 ENCODE Processing Pipeline 8984ba38f5dc5a704c5d03093d05d597 https://www.encodeproject.org/files/ENCFF257RLI/@@download/ENCFF257RLI.bigWig hg19 released missing genetic modification characterization ENCFF441LZN bigWig fold change over control ENCSR598TIR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF507-human ENCAB728YTO DNA False 2017-02-13 ENCODE 1, 2 ENCFF129IXY, ENCFF821SUV, ENCFF949SXE 2177735469 ENCODE Processing Pipeline a0cf41a2285e8dff97c11dd4453d4d1e https://www.encodeproject.org/files/ENCFF441LZN/@@download/ENCFF441LZN.bigWig hg19 released missing genetic modification characterization ENCFF211EQN bed narrowPeak peaks ENCSR598TIR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF507-human ENCAB728YTO DNA False 2017-02-13 ENCODE 2 ENCFF129IXY, ENCFF949SXE 7188875 ENCODE Processing Pipeline 9503995f71ff536c4adfe93168cc0182 https://www.encodeproject.org/files/ENCFF211EQN/@@download/ENCFF211EQN.bed.gz hg19 released missing genetic modification characterization ENCFF692NTA bigBed narrowPeak peaks ENCSR598TIR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF507-human ENCAB728YTO DNA False 2017-02-13 ENCODE 1, 2 ENCFF396RQL 13076538 ENCODE Processing Pipeline 747a59f21474b9c8e3d00dd6e2bc6a13 https://www.encodeproject.org/files/ENCFF692NTA/@@download/ENCFF692NTA.bigBed hg19 released missing genetic modification characterization ENCFF911SRU bigWig signal p-value ENCSR598TIR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF507-human ENCAB728YTO DNA False 2017-02-13 ENCODE 2 ENCFF129IXY, ENCFF949SXE 875937934 ENCODE Processing Pipeline 06cf2a811c941adf22e9bb4cefdf6e77 https://www.encodeproject.org/files/ENCFF911SRU/@@download/ENCFF911SRU.bigWig hg19 released missing genetic modification characterization ENCFF096XNX bed narrowPeak peaks ENCSR598TIR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF507-human ENCAB728YTO DNA False 2017-02-13 ENCODE 1 ENCFF129IXY, ENCFF821SUV 7115701 ENCODE Processing Pipeline 0e76f84baefde2f4cff875157755018e https://www.encodeproject.org/files/ENCFF096XNX/@@download/ENCFF096XNX.bed.gz hg19 released missing genetic modification characterization ENCFF396RQL bed narrowPeak peaks ENCSR598TIR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF507-human ENCAB728YTO DNA False 2017-02-13 ENCODE 1, 2 ENCFF129IXY, ENCFF821SUV, ENCFF949SXE 7272347 ENCODE Processing Pipeline 57e11a3a632dbd8f80eb7d732dadf665 https://www.encodeproject.org/files/ENCFF396RQL/@@download/ENCFF396RQL.bed.gz hg19 released missing genetic modification characterization ENCFF730SSI bigWig signal p-value ENCSR598TIR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF507-human ENCAB728YTO DNA False 2017-02-13 ENCODE 1 ENCFF129IXY, ENCFF821SUV 898872790 ENCODE Processing Pipeline e8b7d26563e2b9fe7334b145a085e03e https://www.encodeproject.org/files/ENCFF730SSI/@@download/ENCFF730SSI.bigWig hg19 released missing genetic modification characterization ENCFF558PVA bigWig fold change over control ENCSR598TIR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF507-human ENCAB728YTO DNA False 2017-02-13 ENCODE 1 ENCFF129IXY, ENCFF821SUV 1217070799 ENCODE Processing Pipeline 3c516e2ed04f19c77580dadae83975ac https://www.encodeproject.org/files/ENCFF558PVA/@@download/ENCFF558PVA.bigWig hg19 released missing genetic modification characterization ENCFF021QXY bigWig fold change over control ENCSR598TIR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF507-human ENCAB728YTO DNA False 2017-02-13 ENCODE 2 ENCFF230BZG, ENCFF772UWJ 1741622162 ENCODE Processing Pipeline 69fe033b266682f5fb9071c8b534f54e https://www.encodeproject.org/files/ENCFF021QXY/@@download/ENCFF021QXY.bigWig GRCh38 released missing genetic modification characterization ENCFF257WVJ bigWig fold change over control ENCSR598TIR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF507-human ENCAB728YTO DNA False 2017-02-13 ENCODE 1, 2 ENCFF230BZG, ENCFF606TJM, ENCFF772UWJ 2182257128 ENCODE Processing Pipeline ab3637f3edf3071dfae876596d62bdf7 https://www.encodeproject.org/files/ENCFF257WVJ/@@download/ENCFF257WVJ.bigWig GRCh38 released missing genetic modification characterization ENCFF344GVL bigBed narrowPeak conservative idr thresholded peaks ENCSR598TIR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF507-human ENCAB728YTO DNA False 2017-02-13 ENCODE 1, 2 ENCFF512UAX 491303 ENCODE Processing Pipeline 64a24182c9ccea0559fb81cd9631ea43 https://www.encodeproject.org/files/ENCFF344GVL/@@download/ENCFF344GVL.bigBed GRCh38 released missing genetic modification characterization ENCFF565EUP bed narrowPeak optimal idr thresholded peaks ENCSR598TIR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF507-human ENCAB728YTO DNA False 2017-02-13 ENCODE 1, 2 ENCFF419RSJ, ENCFF656LUR, ENCFF759XRT, ENCFF841IWY 215562 ENCODE Processing Pipeline 41e7fefe9a39f61ac92989bdc3f65800 https://www.encodeproject.org/files/ENCFF565EUP/@@download/ENCFF565EUP.bed.gz GRCh38 released missing genetic modification characterization ENCFF610XQH bed narrowPeak conservative idr thresholded peaks ENCSR598TIR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF507-human ENCAB728YTO DNA False 2017-02-13 ENCODE 1, 2 ENCFF001TDO, ENCFF096XNX, ENCFF211EQN, ENCFF396RQL 204242 ENCODE Processing Pipeline 78aa33b6144d912670765fcf90542d6c https://www.encodeproject.org/files/ENCFF610XQH/@@download/ENCFF610XQH.bed.gz hg19 released missing genetic modification characterization ENCFF841IWY bed narrowPeak peaks ENCSR598TIR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF507-human ENCAB728YTO DNA False 2017-02-13 ENCODE 1, 2 ENCFF230BZG, ENCFF606TJM, ENCFF772UWJ 7275651 ENCODE Processing Pipeline 0f956574719d378351eeb404f2ecd954 https://www.encodeproject.org/files/ENCFF841IWY/@@download/ENCFF841IWY.bed.gz GRCh38 released missing genetic modification characterization ENCFF512UAX bed narrowPeak conservative idr thresholded peaks ENCSR598TIR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF507-human ENCAB728YTO DNA False 2017-02-13 ENCODE 1, 2 ENCFF419RSJ, ENCFF656LUR, ENCFF759XRT, ENCFF841IWY 202328 ENCODE Processing Pipeline 8c2990eb357aea977e1bad9d790f93c3 https://www.encodeproject.org/files/ENCFF512UAX/@@download/ENCFF512UAX.bed.gz GRCh38 released missing genetic modification characterization ENCFF378LUO bigWig signal p-value ENCSR598TIR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF507-human ENCAB728YTO DNA False 2017-02-13 ENCODE 1 ENCFF230BZG, ENCFF606TJM 902778250 ENCODE Processing Pipeline 910287f4384a1357fef23374007fb223 https://www.encodeproject.org/files/ENCFF378LUO/@@download/ENCFF378LUO.bigWig GRCh38 released missing genetic modification characterization ENCFF782FTE bigWig signal p-value ENCSR598TIR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF507-human ENCAB728YTO DNA False 2017-02-13 ENCODE 2 ENCFF230BZG, ENCFF772UWJ 903620054 ENCODE Processing Pipeline 875f183216e038b409cc93bb0548ac10 https://www.encodeproject.org/files/ENCFF782FTE/@@download/ENCFF782FTE.bigWig GRCh38 released missing genetic modification characterization ENCFF881EFY bigBed narrowPeak peaks ENCSR598TIR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF507-human ENCAB728YTO DNA False 2017-02-13 ENCODE 1 ENCFF656LUR 13277997 ENCODE Processing Pipeline 25d6fdc9f4a9715000c077b36de94ff6 https://www.encodeproject.org/files/ENCFF881EFY/@@download/ENCFF881EFY.bigBed GRCh38 released missing genetic modification characterization ENCFF656LUR bed narrowPeak peaks ENCSR598TIR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF507-human ENCAB728YTO DNA False 2017-02-13 ENCODE 1 ENCFF230BZG, ENCFF606TJM 7093565 ENCODE Processing Pipeline e73bda8d9d9388e1071ea85cf72de74a https://www.encodeproject.org/files/ENCFF656LUR/@@download/ENCFF656LUR.bed.gz GRCh38 released missing genetic modification characterization ENCFF516MZS bigBed narrowPeak peaks ENCSR598TIR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF507-human ENCAB728YTO DNA False 2017-02-13 ENCODE 2 ENCFF759XRT 13157254 ENCODE Processing Pipeline 5f4c3122ddd4dee7ef3ed0f04f4ebb0d https://www.encodeproject.org/files/ENCFF516MZS/@@download/ENCFF516MZS.bigBed GRCh38 released missing genetic modification characterization ENCFF020ABY bigBed narrowPeak peaks ENCSR598TIR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF507-human ENCAB728YTO DNA False 2017-02-13 ENCODE 1, 2 ENCFF841IWY 13089862 ENCODE Processing Pipeline e1a2ff5a55d446f7cb61f08645c54f3c https://www.encodeproject.org/files/ENCFF020ABY/@@download/ENCFF020ABY.bigBed GRCh38 released missing genetic modification characterization ENCFF119NAV bigWig signal p-value ENCSR598TIR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF507-human ENCAB728YTO DNA False 2017-02-13 ENCODE 1, 2 ENCFF230BZG, ENCFF606TJM, ENCFF772UWJ 843761808 ENCODE Processing Pipeline 1ad579b34d4dadda3b4c3f24b66386c4 https://www.encodeproject.org/files/ENCFF119NAV/@@download/ENCFF119NAV.bigWig GRCh38 released missing genetic modification characterization ENCFF038PBJ bigWig fold change over control ENCSR598TIR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF507-human ENCAB728YTO DNA False 2017-02-13 ENCODE 1 ENCFF230BZG, ENCFF606TJM 1220486391 ENCODE Processing Pipeline ce0b83d690d41ac0c7145b002667385b https://www.encodeproject.org/files/ENCFF038PBJ/@@download/ENCFF038PBJ.bigWig GRCh38 released missing genetic modification characterization ENCFF759XRT bed narrowPeak peaks ENCSR598TIR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF507-human ENCAB728YTO DNA False 2017-02-13 ENCODE 2 ENCFF230BZG, ENCFF772UWJ 7174514 ENCODE Processing Pipeline 302b16549fbc9c873e4c29dd0799a6d6 https://www.encodeproject.org/files/ENCFF759XRT/@@download/ENCFF759XRT.bed.gz GRCh38 released missing genetic modification characterization ENCFF653VWY bigBed narrowPeak optimal idr thresholded peaks ENCSR598TIR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF507-human ENCAB728YTO DNA False 2017-02-13 ENCODE 1, 2 ENCFF565EUP 514432 ENCODE Processing Pipeline 2251b869717c6850584d09ca977cefd2 https://www.encodeproject.org/files/ENCFF653VWY/@@download/ENCFF653VWY.bigBed GRCh38 released missing genetic modification characterization ENCFF581QYR fastq reads ENCSR568PGX ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC1-human ENCAB447WPM DNA False 2016-11-22 ENCODE 2 1 100 paired-ended 1 ENCFF394TOY 3442946016 Michael Snyder, Stanford e7e1d69d688b1056f5070950c9208c69 https://www.encodeproject.org/files/ENCFF581QYR/@@download/ENCFF581QYR.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFD/ archived borderline replicate concordance, inconsistent platforms, mild to moderate bottlenecking, moderate library complexity ENCFF910QTP fastq reads ENCSR568PGX ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC1-human ENCAB447WPM DNA False 2016-11-22 ENCODE 1 1 100 paired-ended 2 ENCFF895UGJ 4677570485 Michael Snyder, Stanford b437b38270e8445861f69fdce6e09803 SRA:SRR5111791 https://www.encodeproject.org/files/ENCFF910QTP/@@download/ENCFF910QTP.fastq.gz Illumina HiSeq 4000 /files/ENCFF502GTS/ released borderline replicate concordance, inconsistent platforms, mild to moderate bottlenecking, moderate library complexity ENCFF895UGJ fastq reads ENCSR568PGX ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC1-human ENCAB447WPM DNA False 2016-11-22 ENCODE 1 1 100 paired-ended 1 ENCFF910QTP 4477868984 Michael Snyder, Stanford aae2d184568c6a1cf6be4c6f73a8115c SRA:SRR5111791 https://www.encodeproject.org/files/ENCFF895UGJ/@@download/ENCFF895UGJ.fastq.gz Illumina HiSeq 4000 /files/ENCFF498JMO/ released borderline replicate concordance, inconsistent platforms, mild to moderate bottlenecking, moderate library complexity ENCFF394TOY fastq reads ENCSR568PGX ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC1-human ENCAB447WPM DNA False 2016-11-22 ENCODE 2 1 100 paired-ended 2 ENCFF581QYR 3494408102 Michael Snyder, Stanford 2deacd25063d079da4bbc582c646be1d https://www.encodeproject.org/files/ENCFF394TOY/@@download/ENCFF394TOY.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFA/ archived borderline replicate concordance, inconsistent platforms, mild to moderate bottlenecking, moderate library complexity ENCFF677ULQ fastq reads ENCSR568PGX ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC1-human ENCAB447WPM DNA False 2016-11-22 ENCODE 2 1 100 paired-ended 1 ENCFF410PAM 5658627582 Michael Snyder, Stanford d93b4eb38fd6f2e033599d05a21bb136 SRA:SRR5111790 https://www.encodeproject.org/files/ENCFF677ULQ/@@download/ENCFF677ULQ.fastq.gz Illumina HiSeq 4000 /files/ENCFF259GQA/ released borderline replicate concordance, inconsistent platforms, mild to moderate bottlenecking, moderate library complexity ENCFF410PAM fastq reads ENCSR568PGX ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC1-human ENCAB447WPM DNA False 2016-11-22 ENCODE 2 1 100 paired-ended 2 ENCFF677ULQ 6586408434 Michael Snyder, Stanford 97ead85b5085e12deefcc4267b53431d SRA:SRR5111790 https://www.encodeproject.org/files/ENCFF410PAM/@@download/ENCFF410PAM.fastq.gz Illumina HiSeq 4000 /files/ENCFF837MIV/ released borderline replicate concordance, inconsistent platforms, mild to moderate bottlenecking, moderate library complexity ENCFF789EWD bam unfiltered alignments ENCSR568PGX ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC1-human ENCAB447WPM DNA False 2016-11-22 ENCODE 1 100 ENCFF643CGH, ENCFF895UGJ, ENCFF910QTP 7876837255 ENCODE Processing Pipeline 68debf1aed48140db5b5f6c2193492d9 https://www.encodeproject.org/files/ENCFF789EWD/@@download/ENCFF789EWD.bam GRCh38 released borderline replicate concordance, inconsistent platforms, mild to moderate bottlenecking, moderate library complexity ENCFF550JCP bam unfiltered alignments ENCSR568PGX ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC1-human ENCAB447WPM DNA False 2016-11-22 ENCODE 2 100 ENCFF410PAM, ENCFF643CGH, ENCFF677ULQ 10797737772 ENCODE Processing Pipeline c14c0dde18124331d12b43f9c6623d72 https://www.encodeproject.org/files/ENCFF550JCP/@@download/ENCFF550JCP.bam GRCh38 released borderline replicate concordance, inconsistent platforms, mild to moderate bottlenecking, moderate library complexity ENCFF785NOU bam alignments ENCSR568PGX ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC1-human ENCAB447WPM DNA False 2016-11-22 ENCODE 1 100 ENCFF643CGH, ENCFF895UGJ, ENCFF910QTP 3988920627 ENCODE Processing Pipeline 09592de377cac341487c4d9d0ec68231 https://www.encodeproject.org/files/ENCFF785NOU/@@download/ENCFF785NOU.bam GRCh38 released borderline replicate concordance, inconsistent platforms, mild to moderate bottlenecking, moderate library complexity ENCFF135YTU bam alignments ENCSR568PGX ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC1-human ENCAB447WPM DNA False 2016-11-22 ENCODE 2 100 ENCFF410PAM, ENCFF643CGH, ENCFF677ULQ 6679698814 ENCODE Processing Pipeline c75a4371aa088bce1187bc288545e1dd https://www.encodeproject.org/files/ENCFF135YTU/@@download/ENCFF135YTU.bam GRCh38 released borderline replicate concordance, inconsistent platforms, mild to moderate bottlenecking, moderate library complexity ENCFF052ZSK bigWig signal p-value ENCSR568PGX ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC1-human ENCAB447WPM DNA False 2016-11-22 ENCODE 1 ENCFF785NOU, ENCFF790TAN 1103784465 ENCODE Processing Pipeline de16c242f346a0c8f9dd0b1e1f733b3c https://www.encodeproject.org/files/ENCFF052ZSK/@@download/ENCFF052ZSK.bigWig GRCh38 released borderline replicate concordance, inconsistent platforms, mild to moderate bottlenecking, moderate library complexity ENCFF961HVH bigWig signal p-value ENCSR568PGX ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC1-human ENCAB447WPM DNA False 2016-11-22 ENCODE 2 ENCFF135YTU, ENCFF712WXB, ENCFF790TAN 2140877219 ENCODE Processing Pipeline 10fc0c53eaca1bba12aa677cb80a37a0 https://www.encodeproject.org/files/ENCFF961HVH/@@download/ENCFF961HVH.bigWig GRCh38 released borderline replicate concordance, inconsistent platforms, mild to moderate bottlenecking, moderate library complexity ENCFF783LXR bigWig signal p-value ENCSR568PGX ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC1-human ENCAB447WPM DNA False 2016-11-22 ENCODE 1, 2 ENCFF135YTU, ENCFF712WXB, ENCFF785NOU, ENCFF790TAN 2466208577 ENCODE Processing Pipeline c9c3fdec2aafd6e680e3cbba01388c0c https://www.encodeproject.org/files/ENCFF783LXR/@@download/ENCFF783LXR.bigWig GRCh38 released borderline replicate concordance, inconsistent platforms, mild to moderate bottlenecking, moderate library complexity ENCFF098AKJ bigWig fold change over control ENCSR568PGX ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC1-human ENCAB447WPM DNA False 2016-11-22 ENCODE 1 ENCFF785NOU, ENCFF790TAN 1410582993 ENCODE Processing Pipeline 65c21e2070c788dc43dd645c2f14d9e2 https://www.encodeproject.org/files/ENCFF098AKJ/@@download/ENCFF098AKJ.bigWig GRCh38 released borderline replicate concordance, inconsistent platforms, mild to moderate bottlenecking, moderate library complexity ENCFF715DWW bigWig fold change over control ENCSR568PGX ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC1-human ENCAB447WPM DNA False 2016-11-22 ENCODE 2 ENCFF135YTU, ENCFF712WXB, ENCFF790TAN 2259496550 ENCODE Processing Pipeline 71e260925d9ea3e452664879c46a1672 https://www.encodeproject.org/files/ENCFF715DWW/@@download/ENCFF715DWW.bigWig GRCh38 released borderline replicate concordance, inconsistent platforms, mild to moderate bottlenecking, moderate library complexity ENCFF741BVS bigWig fold change over control ENCSR568PGX ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC1-human ENCAB447WPM DNA False 2016-11-22 ENCODE 1, 2 ENCFF135YTU, ENCFF712WXB, ENCFF785NOU, ENCFF790TAN 2703589883 ENCODE Processing Pipeline 31608e244f38ecb0b46565f6acb30bfe https://www.encodeproject.org/files/ENCFF741BVS/@@download/ENCFF741BVS.bigWig GRCh38 released borderline replicate concordance, inconsistent platforms, mild to moderate bottlenecking, moderate library complexity ENCFF032INA bed narrowPeak peaks ENCSR568PGX ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC1-human ENCAB447WPM DNA False 2016-11-22 ENCODE 1 ENCFF785NOU, ENCFF790TAN 6423005 ENCODE Processing Pipeline 3be5b6a9b5c3953f496271f2c3ac9e49 https://www.encodeproject.org/files/ENCFF032INA/@@download/ENCFF032INA.bed.gz GRCh38 released borderline replicate concordance, inconsistent platforms, mild to moderate bottlenecking, moderate library complexity ENCFF596JMC bed narrowPeak peaks ENCSR568PGX ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC1-human ENCAB447WPM DNA False 2016-11-22 ENCODE 2 ENCFF135YTU, ENCFF712WXB, ENCFF790TAN 7084324 ENCODE Processing Pipeline 0f978650c7475d3f4c6c470f4f1773dd https://www.encodeproject.org/files/ENCFF596JMC/@@download/ENCFF596JMC.bed.gz GRCh38 released borderline replicate concordance, inconsistent platforms, mild to moderate bottlenecking, moderate library complexity ENCFF600LZM bigBed narrowPeak peaks ENCSR568PGX ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC1-human ENCAB447WPM DNA False 2016-11-22 ENCODE 1, 2 ENCFF332REP 13337235 ENCODE Processing Pipeline 1b4b4b83f5bac75612db0d51fdcda35c https://www.encodeproject.org/files/ENCFF600LZM/@@download/ENCFF600LZM.bigBed GRCh38 released borderline replicate concordance, inconsistent platforms, mild to moderate bottlenecking, moderate library complexity ENCFF661VOO bed narrowPeak optimal idr thresholded peaks ENCSR568PGX ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC1-human ENCAB447WPM DNA False 2016-11-22 ENCODE 1, 2 ENCFF032INA, ENCFF332REP, ENCFF419RSJ, ENCFF596JMC 76135 ENCODE Processing Pipeline 61e24bc3f8f4c822d14ccef71fd89050 https://www.encodeproject.org/files/ENCFF661VOO/@@download/ENCFF661VOO.bed.gz GRCh38 released borderline replicate concordance, inconsistent platforms, mild to moderate bottlenecking, moderate library complexity ENCFF332REP bed narrowPeak peaks ENCSR568PGX ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC1-human ENCAB447WPM DNA False 2016-11-22 ENCODE 1, 2 ENCFF135YTU, ENCFF712WXB, ENCFF785NOU, ENCFF790TAN 7354774 ENCODE Processing Pipeline 55cb93dbcf3e06a750c032be09dcb72a https://www.encodeproject.org/files/ENCFF332REP/@@download/ENCFF332REP.bed.gz GRCh38 released borderline replicate concordance, inconsistent platforms, mild to moderate bottlenecking, moderate library complexity ENCFF977QAV bigBed narrowPeak peaks ENCSR568PGX ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC1-human ENCAB447WPM DNA False 2016-11-22 ENCODE 1 ENCFF032INA 11071304 ENCODE Processing Pipeline 432b2f2ce5502926ed8524e09fd930c6 https://www.encodeproject.org/files/ENCFF977QAV/@@download/ENCFF977QAV.bigBed GRCh38 released borderline replicate concordance, inconsistent platforms, mild to moderate bottlenecking, moderate library complexity ENCFF878AST bigBed narrowPeak peaks ENCSR568PGX ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC1-human ENCAB447WPM DNA False 2016-11-22 ENCODE 2 ENCFF596JMC 11283346 ENCODE Processing Pipeline f80b12791b4862ac7e65204454dca973 https://www.encodeproject.org/files/ENCFF878AST/@@download/ENCFF878AST.bigBed GRCh38 released borderline replicate concordance, inconsistent platforms, mild to moderate bottlenecking, moderate library complexity ENCFF237ZFZ bed narrowPeak conservative idr thresholded peaks ENCSR568PGX ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC1-human ENCAB447WPM DNA False 2016-11-22 ENCODE 1, 2 ENCFF032INA, ENCFF332REP, ENCFF419RSJ, ENCFF596JMC 38592 ENCODE Processing Pipeline 01ab19ed6bbfddf189ed76a639aa30d0 https://www.encodeproject.org/files/ENCFF237ZFZ/@@download/ENCFF237ZFZ.bed.gz GRCh38 released borderline replicate concordance, inconsistent platforms, mild to moderate bottlenecking, moderate library complexity ENCFF970LAU bigBed narrowPeak conservative idr thresholded peaks ENCSR568PGX ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC1-human ENCAB447WPM DNA False 2016-11-22 ENCODE 1, 2 ENCFF237ZFZ 136163 ENCODE Processing Pipeline 4cf2973712d984bb2fc6c17e2676f1a0 https://www.encodeproject.org/files/ENCFF970LAU/@@download/ENCFF970LAU.bigBed GRCh38 released borderline replicate concordance, inconsistent platforms, mild to moderate bottlenecking, moderate library complexity ENCFF043QUA bigBed narrowPeak optimal idr thresholded peaks ENCSR568PGX ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC1-human ENCAB447WPM DNA False 2016-11-22 ENCODE 1, 2 ENCFF661VOO 198325 ENCODE Processing Pipeline ac6ef401645601c6d638e7dcb6223512 https://www.encodeproject.org/files/ENCFF043QUA/@@download/ENCFF043QUA.bigBed GRCh38 released borderline replicate concordance, inconsistent platforms, mild to moderate bottlenecking, moderate library complexity ENCFF116VYT bam unfiltered alignments ENCSR568PGX ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC1-human ENCAB447WPM DNA False 2016-11-22 ENCODE 1 100 ENCFF807MUK, ENCFF895UGJ, ENCFF910QTP 7878769379 ENCODE Processing Pipeline 1762d75fb168bcc55f9c1fcb427a79c8 https://www.encodeproject.org/files/ENCFF116VYT/@@download/ENCFF116VYT.bam hg19 released borderline replicate concordance, inconsistent platforms, mild to moderate bottlenecking, moderate library complexity ENCFF769UEW bam alignments ENCSR568PGX ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC1-human ENCAB447WPM DNA False 2016-11-22 ENCODE 1 100 ENCFF807MUK, ENCFF895UGJ, ENCFF910QTP 3986942347 ENCODE Processing Pipeline 9ee07c873918c2b86a38967422113e26 https://www.encodeproject.org/files/ENCFF769UEW/@@download/ENCFF769UEW.bam hg19 released borderline replicate concordance, inconsistent platforms, mild to moderate bottlenecking, moderate library complexity ENCFF080BSG bam alignments ENCSR568PGX ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC1-human ENCAB447WPM DNA False 2016-11-22 ENCODE 2 100 ENCFF410PAM, ENCFF677ULQ, ENCFF807MUK 6673499996 ENCODE Processing Pipeline 9046923ca8d3466e8e8da7733b51a948 https://www.encodeproject.org/files/ENCFF080BSG/@@download/ENCFF080BSG.bam hg19 released borderline replicate concordance, inconsistent platforms, mild to moderate bottlenecking, moderate library complexity ENCFF218VOZ bam unfiltered alignments ENCSR568PGX ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC1-human ENCAB447WPM DNA False 2016-11-22 ENCODE 2 100 ENCFF410PAM, ENCFF677ULQ, ENCFF807MUK 10797698113 ENCODE Processing Pipeline 4041ed1cd033dac051627f508f1f0a0f https://www.encodeproject.org/files/ENCFF218VOZ/@@download/ENCFF218VOZ.bam hg19 released borderline replicate concordance, inconsistent platforms, mild to moderate bottlenecking, moderate library complexity ENCFF079BZJ bed narrowPeak peaks ENCSR568PGX ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC1-human ENCAB447WPM DNA False 2016-11-22 ENCODE 1 ENCFF160VXC, ENCFF769UEW 6419314 ENCODE Processing Pipeline d380eda55ddb0be8f68ad0ee2bddd97f https://www.encodeproject.org/files/ENCFF079BZJ/@@download/ENCFF079BZJ.bed.gz hg19 released borderline replicate concordance, inconsistent platforms, mild to moderate bottlenecking, moderate library complexity ENCFF318EEW bigWig signal p-value ENCSR568PGX ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC1-human ENCAB447WPM DNA False 2016-11-22 ENCODE 1 ENCFF160VXC, ENCFF769UEW 1410260778 ENCODE Processing Pipeline d5f85da94625298eb4463ce41546ed37 https://www.encodeproject.org/files/ENCFF318EEW/@@download/ENCFF318EEW.bigWig hg19 released borderline replicate concordance, inconsistent platforms, mild to moderate bottlenecking, moderate library complexity ENCFF816UBD bigWig fold change over control ENCSR568PGX ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC1-human ENCAB447WPM DNA False 2016-11-22 ENCODE 1 ENCFF160VXC, ENCFF769UEW 1384295217 ENCODE Processing Pipeline 609c43b2dbe5c10f29df00eebe7c7a19 https://www.encodeproject.org/files/ENCFF816UBD/@@download/ENCFF816UBD.bigWig hg19 released borderline replicate concordance, inconsistent platforms, mild to moderate bottlenecking, moderate library complexity ENCFF536DPF bed narrowPeak peaks ENCSR568PGX ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC1-human ENCAB447WPM DNA False 2016-11-22 ENCODE 1, 2 ENCFF080BSG, ENCFF160VXC, ENCFF769UEW, ENCFF834TUP 7344565 ENCODE Processing Pipeline 78fb4efce1a828c27cd255cc587deb66 https://www.encodeproject.org/files/ENCFF536DPF/@@download/ENCFF536DPF.bed.gz hg19 released borderline replicate concordance, inconsistent platforms, mild to moderate bottlenecking, moderate library complexity ENCFF191DAE bigBed narrowPeak optimal idr thresholded peaks ENCSR568PGX ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC1-human ENCAB447WPM DNA False 2016-11-22 ENCODE 1, 2 ENCFF605KFA 194562 ENCODE Processing Pipeline 2f05e8c7e530c36703c03c18e124f05a https://www.encodeproject.org/files/ENCFF191DAE/@@download/ENCFF191DAE.bigBed hg19 released borderline replicate concordance, inconsistent platforms, mild to moderate bottlenecking, moderate library complexity ENCFF424HLL bigWig signal p-value ENCSR568PGX ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC1-human ENCAB447WPM DNA False 2016-11-22 ENCODE 2 ENCFF080BSG, ENCFF160VXC, ENCFF834TUP 2164358712 ENCODE Processing Pipeline 42cafba9b162a72263138a5c89c9bb9b https://www.encodeproject.org/files/ENCFF424HLL/@@download/ENCFF424HLL.bigWig hg19 released borderline replicate concordance, inconsistent platforms, mild to moderate bottlenecking, moderate library complexity ENCFF610ITD bigWig signal p-value ENCSR568PGX ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC1-human ENCAB447WPM DNA False 2016-11-22 ENCODE 1, 2 ENCFF080BSG, ENCFF160VXC, ENCFF769UEW, ENCFF834TUP 2462719884 ENCODE Processing Pipeline eeafcd35db3f909d9fdd23d4b570a4c9 https://www.encodeproject.org/files/ENCFF610ITD/@@download/ENCFF610ITD.bigWig hg19 released borderline replicate concordance, inconsistent platforms, mild to moderate bottlenecking, moderate library complexity ENCFF319EUG bigWig fold change over control ENCSR568PGX ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC1-human ENCAB447WPM DNA False 2016-11-22 ENCODE 2 ENCFF080BSG, ENCFF160VXC, ENCFF834TUP 2256747106 ENCODE Processing Pipeline 5e79dc8f390f047ce45a8903cbadfc49 https://www.encodeproject.org/files/ENCFF319EUG/@@download/ENCFF319EUG.bigWig hg19 released borderline replicate concordance, inconsistent platforms, mild to moderate bottlenecking, moderate library complexity ENCFF605KFA bed narrowPeak optimal idr thresholded peaks ENCSR568PGX ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC1-human ENCAB447WPM DNA False 2016-11-22 ENCODE 1, 2 ENCFF001TDO, ENCFF079BZJ, ENCFF536DPF, ENCFF849NGF 74757 ENCODE Processing Pipeline 63f4f243cb229ebb48b19b79389deedf https://www.encodeproject.org/files/ENCFF605KFA/@@download/ENCFF605KFA.bed.gz hg19 released borderline replicate concordance, inconsistent platforms, mild to moderate bottlenecking, moderate library complexity ENCFF330MTO bigWig fold change over control ENCSR568PGX ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC1-human ENCAB447WPM DNA False 2016-11-22 ENCODE 1, 2 ENCFF080BSG, ENCFF160VXC, ENCFF769UEW, ENCFF834TUP 2701766665 ENCODE Processing Pipeline d1adb6e493640d0eb76bb51a49ae117f https://www.encodeproject.org/files/ENCFF330MTO/@@download/ENCFF330MTO.bigWig hg19 released borderline replicate concordance, inconsistent platforms, mild to moderate bottlenecking, moderate library complexity ENCFF849NGF bed narrowPeak peaks ENCSR568PGX ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC1-human ENCAB447WPM DNA False 2016-11-22 ENCODE 2 ENCFF080BSG, ENCFF160VXC, ENCFF834TUP 7073903 ENCODE Processing Pipeline c95f638a38ecf23b1d2c16768da90c41 https://www.encodeproject.org/files/ENCFF849NGF/@@download/ENCFF849NGF.bed.gz hg19 released borderline replicate concordance, inconsistent platforms, mild to moderate bottlenecking, moderate library complexity ENCFF852JJU bigBed narrowPeak peaks ENCSR568PGX ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC1-human ENCAB447WPM DNA False 2016-11-22 ENCODE 1 ENCFF079BZJ 11053679 ENCODE Processing Pipeline 829648b932c0d327c209890f16694f6a https://www.encodeproject.org/files/ENCFF852JJU/@@download/ENCFF852JJU.bigBed hg19 released borderline replicate concordance, inconsistent platforms, mild to moderate bottlenecking, moderate library complexity ENCFF028QJT bigBed narrowPeak peaks ENCSR568PGX ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC1-human ENCAB447WPM DNA False 2016-11-22 ENCODE 2 ENCFF849NGF 11260066 ENCODE Processing Pipeline 6ac04645f4f543b2152e8ce59c7d8649 https://www.encodeproject.org/files/ENCFF028QJT/@@download/ENCFF028QJT.bigBed hg19 released borderline replicate concordance, inconsistent platforms, mild to moderate bottlenecking, moderate library complexity ENCFF652JEE bed narrowPeak conservative idr thresholded peaks ENCSR568PGX ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC1-human ENCAB447WPM DNA False 2016-11-22 ENCODE 1, 2 ENCFF001TDO, ENCFF079BZJ, ENCFF536DPF, ENCFF849NGF 37938 ENCODE Processing Pipeline 03d8238d498037952031823de3466b03 https://www.encodeproject.org/files/ENCFF652JEE/@@download/ENCFF652JEE.bed.gz hg19 released borderline replicate concordance, inconsistent platforms, mild to moderate bottlenecking, moderate library complexity ENCFF249QCV bigBed narrowPeak conservative idr thresholded peaks ENCSR568PGX ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC1-human ENCAB447WPM DNA False 2016-11-22 ENCODE 1, 2 ENCFF652JEE 133076 ENCODE Processing Pipeline b582763aa2193eabbb1bc4bdfc94421a https://www.encodeproject.org/files/ENCFF249QCV/@@download/ENCFF249QCV.bigBed hg19 released borderline replicate concordance, inconsistent platforms, mild to moderate bottlenecking, moderate library complexity ENCFF517NAD bigBed narrowPeak peaks ENCSR568PGX ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC1-human ENCAB447WPM DNA False 2016-11-22 ENCODE 1, 2 ENCFF536DPF 13316841 ENCODE Processing Pipeline f708ce4e42ec4530feb4d93dfabce223 https://www.encodeproject.org/files/ENCFF517NAD/@@download/ENCFF517NAD.bigBed hg19 released borderline replicate concordance, inconsistent platforms, mild to moderate bottlenecking, moderate library complexity ENCFF876VGD bam unfiltered alignments ENCSR711SNW ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA1-human ENCAB104FWW DNA False 2018-01-26 ENCODE 1 100 ENCFF009IPS, ENCFF738HHZ, ENCFF807MUK 3515399957 ENCODE Processing Pipeline 09425ee4d23d9d9cf90b86116c67f573 https://www.encodeproject.org/files/ENCFF876VGD/@@download/ENCFF876VGD.bam hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF662EOT bam unfiltered alignments ENCSR711SNW ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA1-human ENCAB104FWW DNA False 2018-01-26 ENCODE 2 100 ENCFF042FDU, ENCFF343AWT, ENCFF807MUK 5083154755 ENCODE Processing Pipeline 5793a424b92d90f2c66b28997a2ec388 https://www.encodeproject.org/files/ENCFF662EOT/@@download/ENCFF662EOT.bam hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF343AWT fastq reads ENCSR711SNW ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA1-human ENCAB104FWW DNA False 2018-01-26 ENCODE 2 1 100 paired-ended 2 ENCFF042FDU 2414375093 Michael Snyder, Stanford e0542ccac68c14528a6363e9af108f6a https://www.encodeproject.org/files/ENCFF343AWT/@@download/ENCFF343AWT.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFA/ released borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF042FDU fastq reads ENCSR711SNW ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA1-human ENCAB104FWW DNA False 2018-01-26 ENCODE 2 1 100 paired-ended 1 ENCFF343AWT 2338639773 Michael Snyder, Stanford 1ee948eb83360f92520554dfccaada78 https://www.encodeproject.org/files/ENCFF042FDU/@@download/ENCFF042FDU.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFD/ released borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF738HHZ fastq reads ENCSR711SNW ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA1-human ENCAB104FWW DNA False 2018-01-26 ENCODE 1 1 100 paired-ended 1 ENCFF009IPS 1664192460 Michael Snyder, Stanford 7eabef1ba841e3c5133de545ba33a2f9 https://www.encodeproject.org/files/ENCFF738HHZ/@@download/ENCFF738HHZ.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFF/ released borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF009IPS fastq reads ENCSR711SNW ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA1-human ENCAB104FWW DNA False 2018-01-26 ENCODE 1 1 100 paired-ended 2 ENCFF738HHZ 1696735414 Michael Snyder, Stanford fd2f65f503a23fd7b8c67ad4b7acd242 https://www.encodeproject.org/files/ENCFF009IPS/@@download/ENCFF009IPS.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFH/ released borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF624TXF bam alignments ENCSR711SNW ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA1-human ENCAB104FWW DNA False 2018-01-26 ENCODE 1 100 ENCFF009IPS, ENCFF738HHZ, ENCFF807MUK 2375151573 ENCODE Processing Pipeline be81f9e34dcb404729945d20fd42890b https://www.encodeproject.org/files/ENCFF624TXF/@@download/ENCFF624TXF.bam hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF492UHU bam alignments ENCSR711SNW ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA1-human ENCAB104FWW DNA False 2018-01-26 ENCODE 2 100 ENCFF042FDU, ENCFF343AWT, ENCFF807MUK 3578555319 ENCODE Processing Pipeline f450f312b6c40c3e0791d52726abceba https://www.encodeproject.org/files/ENCFF492UHU/@@download/ENCFF492UHU.bam hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF383NGA bigWig signal p-value ENCSR711SNW ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA1-human ENCAB104FWW DNA False 2018-01-26 ENCODE 1 ENCFF581ZJL, ENCFF624TXF 921455570 ENCODE Processing Pipeline 65dd9f2c5db5df3437d8c77acf75cfdc https://www.encodeproject.org/files/ENCFF383NGA/@@download/ENCFF383NGA.bigWig hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF841SVI bigWig signal p-value ENCSR711SNW ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA1-human ENCAB104FWW DNA False 2018-01-26 ENCODE 2 ENCFF051LWI, ENCFF492UHU 958767404 ENCODE Processing Pipeline 7ec0d537935484a1b12c618f5dcfe728 https://www.encodeproject.org/files/ENCFF841SVI/@@download/ENCFF841SVI.bigWig hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF225ESE bigWig signal p-value ENCSR711SNW ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA1-human ENCAB104FWW DNA False 2018-01-26 ENCODE 1, 2 ENCFF051LWI, ENCFF492UHU, ENCFF581ZJL, ENCFF624TXF 1802848590 ENCODE Processing Pipeline f3e7dbde6dc0629b5d4462f009e265da https://www.encodeproject.org/files/ENCFF225ESE/@@download/ENCFF225ESE.bigWig hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF670FBR bigWig fold change over control ENCSR711SNW ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA1-human ENCAB104FWW DNA False 2018-01-26 ENCODE 1 ENCFF581ZJL, ENCFF624TXF 879683606 ENCODE Processing Pipeline 91aa347a7ebab6ca5919a59ffeb7ad14 https://www.encodeproject.org/files/ENCFF670FBR/@@download/ENCFF670FBR.bigWig hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF936PRA bigWig fold change over control ENCSR711SNW ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA1-human ENCAB104FWW DNA False 2018-01-26 ENCODE 2 ENCFF051LWI, ENCFF492UHU 1013614242 ENCODE Processing Pipeline 06d582410025fbc017c917829325e31d https://www.encodeproject.org/files/ENCFF936PRA/@@download/ENCFF936PRA.bigWig hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF646IRR bigWig fold change over control ENCSR711SNW ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA1-human ENCAB104FWW DNA False 2018-01-26 ENCODE 1, 2 ENCFF051LWI, ENCFF492UHU, ENCFF581ZJL, ENCFF624TXF 1801991348 ENCODE Processing Pipeline c54dabbb757499eed05e5a72c2527631 https://www.encodeproject.org/files/ENCFF646IRR/@@download/ENCFF646IRR.bigWig hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF171LJW bed narrowPeak peaks ENCSR711SNW ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA1-human ENCAB104FWW DNA False 2018-01-26 ENCODE 1 ENCFF581ZJL, ENCFF624TXF 5897849 ENCODE Processing Pipeline e77ca1dd2ba5e555688871ed01753bc8 https://www.encodeproject.org/files/ENCFF171LJW/@@download/ENCFF171LJW.bed.gz hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF602HNM bigBed narrowPeak peaks ENCSR711SNW ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA1-human ENCAB104FWW DNA False 2018-01-26 ENCODE 1 ENCFF171LJW 11164889 ENCODE Processing Pipeline b32803c4c45fdc3118e4b816ffd55a6e https://www.encodeproject.org/files/ENCFF602HNM/@@download/ENCFF602HNM.bigBed hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF109EWV bed narrowPeak peaks ENCSR711SNW ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA1-human ENCAB104FWW DNA False 2018-01-26 ENCODE 1, 2 ENCFF051LWI, ENCFF492UHU, ENCFF581ZJL, ENCFF624TXF 7041721 ENCODE Processing Pipeline 75ce8e52c3e1dcb728473af3e4b217db https://www.encodeproject.org/files/ENCFF109EWV/@@download/ENCFF109EWV.bed.gz hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF970QSE bed narrowPeak peaks ENCSR711SNW ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA1-human ENCAB104FWW DNA False 2018-01-26 ENCODE 2 ENCFF051LWI, ENCFF492UHU 6315831 ENCODE Processing Pipeline 452e82234e245d6bffd74b9e4d727469 https://www.encodeproject.org/files/ENCFF970QSE/@@download/ENCFF970QSE.bed.gz hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF714LCM bigBed narrowPeak peaks ENCSR711SNW ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA1-human ENCAB104FWW DNA False 2018-01-26 ENCODE 2 ENCFF970QSE 11121789 ENCODE Processing Pipeline 9198f7d9445afb12ec5064f2be4d6e8d https://www.encodeproject.org/files/ENCFF714LCM/@@download/ENCFF714LCM.bigBed hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF830OUC bigBed narrowPeak peaks ENCSR711SNW ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA1-human ENCAB104FWW DNA False 2018-01-26 ENCODE 1, 2 ENCFF109EWV 11034963 ENCODE Processing Pipeline 24a9311e4c4b8a8a3e87dd3f9c4e79c6 https://www.encodeproject.org/files/ENCFF830OUC/@@download/ENCFF830OUC.bigBed hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF228HJT bam unfiltered alignments ENCSR711SNW ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA1-human ENCAB104FWW DNA False 2018-01-26 ENCODE 1 100 ENCFF009IPS, ENCFF643CGH, ENCFF738HHZ 3515505659 ENCODE Processing Pipeline 34aec77391697c82f7fe1c21cf218752 https://www.encodeproject.org/files/ENCFF228HJT/@@download/ENCFF228HJT.bam GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF425PAF bam unfiltered alignments ENCSR711SNW ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA1-human ENCAB104FWW DNA False 2018-01-26 ENCODE 2 100 ENCFF042FDU, ENCFF343AWT, ENCFF643CGH 5085281933 ENCODE Processing Pipeline a75feb37cc134cf89a66c2300253190b https://www.encodeproject.org/files/ENCFF425PAF/@@download/ENCFF425PAF.bam GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF354JLP bam alignments ENCSR711SNW ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA1-human ENCAB104FWW DNA False 2018-01-26 ENCODE 1 100 ENCFF009IPS, ENCFF643CGH, ENCFF738HHZ 2376034844 ENCODE Processing Pipeline e506604a1c3527ecd1443a930080ccbb https://www.encodeproject.org/files/ENCFF354JLP/@@download/ENCFF354JLP.bam GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF146PDA bam alignments ENCSR711SNW ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA1-human ENCAB104FWW DNA False 2018-01-26 ENCODE 2 100 ENCFF042FDU, ENCFF343AWT, ENCFF643CGH 3580329231 ENCODE Processing Pipeline 4b8b8f8304373998484236577e4382c5 https://www.encodeproject.org/files/ENCFF146PDA/@@download/ENCFF146PDA.bam GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF789LBP bigWig signal p-value ENCSR711SNW ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA1-human ENCAB104FWW DNA False 2018-01-26 ENCODE 1 ENCFF354JLP, ENCFF910IKB 1015153487 ENCODE Processing Pipeline 5e273c5033fdf890f57ad5a9b6478783 https://www.encodeproject.org/files/ENCFF789LBP/@@download/ENCFF789LBP.bigWig GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF216FLX bigWig signal p-value ENCSR711SNW ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA1-human ENCAB104FWW DNA False 2018-01-26 ENCODE 2 ENCFF146PDA, ENCFF227IZS 1082268936 ENCODE Processing Pipeline 2d5f71c04a0bbcaff805574985082769 https://www.encodeproject.org/files/ENCFF216FLX/@@download/ENCFF216FLX.bigWig GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF417KRO bigWig signal p-value ENCSR711SNW ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA1-human ENCAB104FWW DNA False 2018-01-26 ENCODE 1, 2 ENCFF146PDA, ENCFF227IZS, ENCFF354JLP, ENCFF910IKB 1820170846 ENCODE Processing Pipeline 6e902c898962866c9a08d3f545777051 https://www.encodeproject.org/files/ENCFF417KRO/@@download/ENCFF417KRO.bigWig GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF800KTB bigWig fold change over control ENCSR711SNW ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA1-human ENCAB104FWW DNA False 2018-01-26 ENCODE 1 ENCFF354JLP, ENCFF910IKB 872219620 ENCODE Processing Pipeline 76bbceca948d5a8eced0a14f0d1329ae https://www.encodeproject.org/files/ENCFF800KTB/@@download/ENCFF800KTB.bigWig GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF593PLG bigWig fold change over control ENCSR711SNW ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA1-human ENCAB104FWW DNA False 2018-01-26 ENCODE 2 ENCFF146PDA, ENCFF227IZS 1010407464 ENCODE Processing Pipeline 74619e90c43a780aade5d4e8d6999a09 https://www.encodeproject.org/files/ENCFF593PLG/@@download/ENCFF593PLG.bigWig GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF048RJY bigWig fold change over control ENCSR711SNW ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA1-human ENCAB104FWW DNA False 2018-01-26 ENCODE 1, 2 ENCFF146PDA, ENCFF227IZS, ENCFF354JLP, ENCFF910IKB 1835370327 ENCODE Processing Pipeline 49d4c9dbe9a0e12f58810e633b25a1f7 https://www.encodeproject.org/files/ENCFF048RJY/@@download/ENCFF048RJY.bigWig GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF856IJA bed narrowPeak peaks ENCSR711SNW ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA1-human ENCAB104FWW DNA False 2018-01-26 ENCODE 1 ENCFF354JLP, ENCFF910IKB 5750631 ENCODE Processing Pipeline e5759f5333a07112f8eec0ff9675d30e https://www.encodeproject.org/files/ENCFF856IJA/@@download/ENCFF856IJA.bed.gz GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF985RNN bed narrowPeak peaks ENCSR711SNW ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA1-human ENCAB104FWW DNA False 2018-01-26 ENCODE 2 ENCFF146PDA, ENCFF227IZS 6132872 ENCODE Processing Pipeline e730bb1b04eac15f24232021e30eb6ee https://www.encodeproject.org/files/ENCFF985RNN/@@download/ENCFF985RNN.bed.gz GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF591ANX bed narrowPeak peaks ENCSR711SNW ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA1-human ENCAB104FWW DNA False 2018-01-26 ENCODE 1, 2 ENCFF146PDA, ENCFF227IZS, ENCFF354JLP, ENCFF910IKB 6963143 ENCODE Processing Pipeline 083e331899d1fe34c2806ae5161eac97 https://www.encodeproject.org/files/ENCFF591ANX/@@download/ENCFF591ANX.bed.gz GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF521ZPM bigBed narrowPeak peaks ENCSR711SNW ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA1-human ENCAB104FWW DNA False 2018-01-26 ENCODE 1 ENCFF856IJA 11156687 ENCODE Processing Pipeline 076dd8c5ca22014566433e8046495697 https://www.encodeproject.org/files/ENCFF521ZPM/@@download/ENCFF521ZPM.bigBed GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF361DHD bigBed narrowPeak peaks ENCSR711SNW ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA1-human ENCAB104FWW DNA False 2018-01-26 ENCODE 2 ENCFF985RNN 11118093 ENCODE Processing Pipeline 07d2486856bf319c1a374326d02a5d1c https://www.encodeproject.org/files/ENCFF361DHD/@@download/ENCFF361DHD.bigBed GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF308TVT bigBed narrowPeak peaks ENCSR711SNW ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA1-human ENCAB104FWW DNA False 2018-01-26 ENCODE 1, 2 ENCFF591ANX 11041617 ENCODE Processing Pipeline ba91b46aa080b44fa26028e0cbe25d71 https://www.encodeproject.org/files/ENCFF308TVT/@@download/ENCFF308TVT.bigBed GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF243YBW bed narrowPeak conservative idr thresholded peaks ENCSR711SNW ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA1-human ENCAB104FWW DNA False 2018-01-26 ENCODE 1, 2 ENCFF419RSJ, ENCFF591ANX, ENCFF856IJA, ENCFF985RNN 17808 ENCODE Processing Pipeline b527cd37ceeb15f7525b2dc6c404c146 https://www.encodeproject.org/files/ENCFF243YBW/@@download/ENCFF243YBW.bed.gz GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF384ACC bigBed narrowPeak conservative idr thresholded peaks ENCSR711SNW ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA1-human ENCAB104FWW DNA False 2018-01-26 ENCODE 1, 2 ENCFF243YBW 96712 ENCODE Processing Pipeline 7f99d2c2631f8d39389a1a044bd787c2 https://www.encodeproject.org/files/ENCFF384ACC/@@download/ENCFF384ACC.bigBed GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF589OOF bed narrowPeak optimal idr thresholded peaks ENCSR711SNW ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA1-human ENCAB104FWW DNA False 2018-01-26 ENCODE 1, 2 ENCFF419RSJ, ENCFF591ANX, ENCFF856IJA, ENCFF985RNN 30516 ENCODE Processing Pipeline fcc3ca42fca4cf49e5c33d2d91d198de https://www.encodeproject.org/files/ENCFF589OOF/@@download/ENCFF589OOF.bed.gz GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF172GOQ bigBed narrowPeak optimal idr thresholded peaks ENCSR711SNW ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA1-human ENCAB104FWW DNA False 2018-01-26 ENCODE 1, 2 ENCFF589OOF 120971 ENCODE Processing Pipeline e855df2f07d76b0efb3f1525493b926b https://www.encodeproject.org/files/ENCFF172GOQ/@@download/ENCFF172GOQ.bigBed GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF518UWK bigBed narrowPeak optimal idr thresholded peaks ENCSR711SNW ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA1-human ENCAB104FWW DNA False 2018-01-26 ENCODE 1, 2 ENCFF967IKR 97857 ENCODE Processing Pipeline 8a05a0a9bd5ad213ce56f6b431c37709 https://www.encodeproject.org/files/ENCFF518UWK/@@download/ENCFF518UWK.bigBed hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF590BAZ bigBed narrowPeak conservative idr thresholded peaks ENCSR711SNW ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA1-human ENCAB104FWW DNA False 2018-01-26 ENCODE 1, 2 ENCFF939JEH 65808 ENCODE Processing Pipeline 51f12f3c6d39e5fe257da2f6c5661248 https://www.encodeproject.org/files/ENCFF590BAZ/@@download/ENCFF590BAZ.bigBed hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF967IKR bed narrowPeak optimal idr thresholded peaks ENCSR711SNW ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA1-human ENCAB104FWW DNA False 2018-01-26 ENCODE 1, 2 ENCFF001TDO, ENCFF109EWV, ENCFF171LJW, ENCFF970QSE 26738 ENCODE Processing Pipeline 599e70697c9787a7d8c4551e5e62263b https://www.encodeproject.org/files/ENCFF967IKR/@@download/ENCFF967IKR.bed.gz hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF939JEH bed narrowPeak conservative idr thresholded peaks ENCSR711SNW ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA1-human ENCAB104FWW DNA False 2018-01-26 ENCODE 1, 2 ENCFF001TDO, ENCFF109EWV, ENCFF171LJW, ENCFF970QSE 14034 ENCODE Processing Pipeline 8dbed902c62f09b3944f623a537e0e11 https://www.encodeproject.org/files/ENCFF939JEH/@@download/ENCFF939JEH.bed.gz hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF000ZCF bam alignments ENCSR000EFW ChIP-seq EFO:0002067 K562 cell line Homo sapiens UBTF-human ENCAB000AMD DNA see document see document False 2012-05-14 ENCODE 1 1 446668699 Michael Snyder, Stanford 222978ae5e4461ad9e9137a99637ba82 https://www.encodeproject.org/files/ENCFF000ZCF/@@download/ENCFF000ZCF.bam hg19 archived borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample, missing derived_from ENCFF000ZCG bam alignments ENCSR000EFW ChIP-seq EFO:0002067 K562 cell line Homo sapiens UBTF-human ENCAB000AMD DNA see document see document False 2012-05-14 ENCODE 2 1 383171903 Michael Snyder, Stanford 0053aad345ecf371d9e0206c061ceceb https://www.encodeproject.org/files/ENCFF000ZCG/@@download/ENCFF000ZCG.bam hg19 archived borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample, missing derived_from ENCFF000ZCH bigBed narrowPeak peaks ENCSR000EFW ChIP-seq EFO:0002067 K562 cell line Homo sapiens UBTF-human ENCAB000AMD DNA see document see document False 2012-05-14 ENCODE ENCFF001VPF 1699552 Michael Snyder, Stanford a6014dc8560f52c717bf866c7730584d https://www.encodeproject.org/files/ENCFF000ZCH/@@download/ENCFF000ZCH.bigBed hg19 archived borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF000ZCI fastq reads ENCSR000EFW ChIP-seq EFO:0002067 K562 cell line Homo sapiens UBTF-human ENCAB000AMD DNA see document see document False 2012-05-14 ENCODE 1 1 36 single-ended 1012619162 Michael Snyder, Stanford d97cc2eaf488cfaf42390ae708a206dc https://www.encodeproject.org/files/ENCFF000ZCI/@@download/ENCFF000ZCI.fastq.gz Illumina Genome Analyzer /files/ENCFF000YQB/ released borderline replicate concordance, low read depth, inconsistent control read length, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF000ZCK fastq reads ENCSR000EFW ChIP-seq EFO:0002067 K562 cell line Homo sapiens UBTF-human ENCAB000AMD DNA see document see document False 2012-05-14 ENCODE 2 1 36 single-ended 951416162 Michael Snyder, Stanford 7fe911a8065da93a0602e33f575563d3 https://www.encodeproject.org/files/ENCFF000ZCK/@@download/ENCFF000ZCK.fastq.gz Illumina Genome Analyzer /files/ENCFF000YQC/ released borderline replicate concordance, low read depth, inconsistent control read length, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF000ZCM bigWig signal ENCSR000EFW ChIP-seq EFO:0002067 K562 cell line Homo sapiens UBTF-human ENCAB000AMD DNA see document see document False 2012-05-14 ENCODE 310848935 Michael Snyder, Stanford b7d17806fe61541160518845ad150b05 https://www.encodeproject.org/files/ENCFF000ZCM/@@download/ENCFF000ZCM.bigWig hg19 archived borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample, missing derived_from ENCFF001VPF bed narrowPeak peaks ENCSR000EFW ChIP-seq EFO:0002067 K562 cell line Homo sapiens UBTF-human ENCAB000AMD DNA see document see document False 2012-05-14 ENCODE 635418 Michael Snyder, Stanford ca98f991de776737876fa7ed62528aaf https://www.encodeproject.org/files/ENCFF001VPF/@@download/ENCFF001VPF.bed.gz hg19 archived borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample, missing derived_from ENCFF002CYN bed narrowPeak optimal idr thresholded peaks ENCSR000EFW ChIP-seq EFO:0002067 K562 cell line Homo sapiens UBTF-human ENCAB000AMD DNA see document see document False 2012-05-14 ENCODE 157971 ENCODE Consortium Analysis Working Group f0874364421681ba4667eee47c4a2ccf https://www.encodeproject.org/files/ENCFF002CYN/@@download/ENCFF002CYN.bed.gz hg19 archived borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample, missing derived_from ENCFF285XQT bigBed narrowPeak optimal idr thresholded peaks ENCSR000EFW ChIP-seq EFO:0002067 K562 cell line Homo sapiens UBTF-human ENCAB000AMD DNA see document see document False 2012-05-14 ENCODE ENCFF002CYN 471880 ENCODE Consortium 16c96b23780eae53e5b5f3932947ceaf https://www.encodeproject.org/files/ENCFF285XQT/@@download/ENCFF285XQT.bigBed hg19 archived borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF221HGL bam unfiltered alignments ENCSR000EFW ChIP-seq EFO:0002067 K562 cell line Homo sapiens UBTF-human ENCAB000AMD DNA see document see document False 2012-05-14 ENCODE 1 28 ENCFF000ZCI, ENCFF643CGH 918812132 ENCODE Processing Pipeline 5628db08143ff1abea3e280a463e57a3 https://www.encodeproject.org/files/ENCFF221HGL/@@download/ENCFF221HGL.bam GRCh38 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF559SVS bam unfiltered alignments ENCSR000EFW ChIP-seq EFO:0002067 K562 cell line Homo sapiens UBTF-human ENCAB000AMD DNA see document see document False 2012-05-14 ENCODE 2 28 ENCFF000ZCK, ENCFF643CGH 872305027 ENCODE Processing Pipeline e0c97943b3544b3e4d40c7cdfbb58459 https://www.encodeproject.org/files/ENCFF559SVS/@@download/ENCFF559SVS.bam GRCh38 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF591IRP bam alignments ENCSR000EFW ChIP-seq EFO:0002067 K562 cell line Homo sapiens UBTF-human ENCAB000AMD DNA see document see document False 2012-05-14 ENCODE 2 28 ENCFF000ZCK, ENCFF643CGH 423654259 ENCODE Processing Pipeline 25c066e62c0d7251dfabb4b66b526c59 https://www.encodeproject.org/files/ENCFF591IRP/@@download/ENCFF591IRP.bam GRCh38 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF708ISS bam alignments ENCSR000EFW ChIP-seq EFO:0002067 K562 cell line Homo sapiens UBTF-human ENCAB000AMD DNA see document see document False 2012-05-14 ENCODE 1 28 ENCFF000ZCI, ENCFF643CGH 477652333 ENCODE Processing Pipeline 1c572e9b3d6d83b4d2074af60872f820 https://www.encodeproject.org/files/ENCFF708ISS/@@download/ENCFF708ISS.bam GRCh38 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF990SPH bam unfiltered alignments ENCSR000EFW ChIP-seq EFO:0002067 K562 cell line Homo sapiens UBTF-human ENCAB000AMD DNA see document see document False 2012-05-14 ENCODE 2 28 ENCFF000ZCK, ENCFF807MUK 867505189 ENCODE Processing Pipeline 56753ae2714d449908ddf56e0707d047 https://www.encodeproject.org/files/ENCFF990SPH/@@download/ENCFF990SPH.bam hg19 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF832GXU bam alignments ENCSR000EFW ChIP-seq EFO:0002067 K562 cell line Homo sapiens UBTF-human ENCAB000AMD DNA see document see document False 2012-05-14 ENCODE 1 28 ENCFF000ZCI, ENCFF807MUK 478385274 ENCODE Processing Pipeline bb48266adc40f37c754a62d60428be1e https://www.encodeproject.org/files/ENCFF832GXU/@@download/ENCFF832GXU.bam hg19 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF962ELB bam alignments ENCSR000EFW ChIP-seq EFO:0002067 K562 cell line Homo sapiens UBTF-human ENCAB000AMD DNA see document see document False 2012-05-14 ENCODE 2 28 ENCFF000ZCK, ENCFF807MUK 424375381 ENCODE Processing Pipeline c7bc3f2efb23d867d46a8bb7ffac03a8 https://www.encodeproject.org/files/ENCFF962ELB/@@download/ENCFF962ELB.bam hg19 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF962QDL bam unfiltered alignments ENCSR000EFW ChIP-seq EFO:0002067 K562 cell line Homo sapiens UBTF-human ENCAB000AMD DNA see document see document False 2012-05-14 ENCODE 1 28 ENCFF000ZCI, ENCFF807MUK 917168864 ENCODE Processing Pipeline 204714df65ad3754c23562468e9c86c8 https://www.encodeproject.org/files/ENCFF962QDL/@@download/ENCFF962QDL.bam hg19 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF472IKE bigWig signal p-value ENCSR000EFW ChIP-seq EFO:0002067 K562 cell line Homo sapiens UBTF-human ENCAB000AMD DNA see document see document False 2012-05-14 ENCODE 1 ENCFF498SAC, ENCFF732TLR, ENCFF832GXU 446730300 ENCODE Processing Pipeline 21275e4edf3ca9c0fc97975f2bb01638 https://www.encodeproject.org/files/ENCFF472IKE/@@download/ENCFF472IKE.bigWig hg19 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF004CFI bigWig signal p-value ENCSR000EFW ChIP-seq EFO:0002067 K562 cell line Homo sapiens UBTF-human ENCAB000AMD DNA see document see document False 2012-05-14 ENCODE 1 ENCFF156NSV, ENCFF708ISS, ENCFF715JBE 382032448 ENCODE Processing Pipeline adf874235c064ac28860ecba6d38df41 https://www.encodeproject.org/files/ENCFF004CFI/@@download/ENCFF004CFI.bigWig GRCh38 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF976ZTX bed narrowPeak peaks ENCSR000EFW ChIP-seq EFO:0002067 K562 cell line Homo sapiens UBTF-human ENCAB000AMD DNA see document see document False 2012-05-14 ENCODE 1 ENCFF498SAC, ENCFF732TLR, ENCFF832GXU 5026248 ENCODE Processing Pipeline e1c449a8b60fd62bdb4142bad0d04618 https://www.encodeproject.org/files/ENCFF976ZTX/@@download/ENCFF976ZTX.bed.gz hg19 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF696JUU bed narrowPeak peaks ENCSR000EFW ChIP-seq EFO:0002067 K562 cell line Homo sapiens UBTF-human ENCAB000AMD DNA see document see document False 2012-05-14 ENCODE 2 ENCFF498SAC, ENCFF962ELB 4050836 ENCODE Processing Pipeline 4a44bab8f4bcead504e3cb3893aca4f3 https://www.encodeproject.org/files/ENCFF696JUU/@@download/ENCFF696JUU.bed.gz hg19 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF377VMB bed narrowPeak peaks ENCSR000EFW ChIP-seq EFO:0002067 K562 cell line Homo sapiens UBTF-human ENCAB000AMD DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF498SAC, ENCFF732TLR, ENCFF832GXU, ENCFF962ELB 5493241 ENCODE Processing Pipeline d1b004d8d683537268870dc48ec68744 https://www.encodeproject.org/files/ENCFF377VMB/@@download/ENCFF377VMB.bed.gz hg19 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF631JCA bigWig fold change over control ENCSR000EFW ChIP-seq EFO:0002067 K562 cell line Homo sapiens UBTF-human ENCAB000AMD DNA see document see document False 2012-05-14 ENCODE 1 ENCFF498SAC, ENCFF732TLR, ENCFF832GXU 300994981 ENCODE Processing Pipeline 13f77fff262d1962274be1b74b0e7ff1 https://www.encodeproject.org/files/ENCFF631JCA/@@download/ENCFF631JCA.bigWig hg19 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF426UWS bigWig fold change over control ENCSR000EFW ChIP-seq EFO:0002067 K562 cell line Homo sapiens UBTF-human ENCAB000AMD DNA see document see document False 2012-05-14 ENCODE 1 ENCFF156NSV, ENCFF708ISS, ENCFF715JBE 300367040 ENCODE Processing Pipeline 10c4552da96d75b12f55ea866e5a4609 https://www.encodeproject.org/files/ENCFF426UWS/@@download/ENCFF426UWS.bigWig GRCh38 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF937HVX bigWig fold change over control ENCSR000EFW ChIP-seq EFO:0002067 K562 cell line Homo sapiens UBTF-human ENCAB000AMD DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF498SAC, ENCFF732TLR, ENCFF832GXU, ENCFF962ELB 482267495 ENCODE Processing Pipeline 3bd878e1e93dc0fa8fca0acc19c32931 https://www.encodeproject.org/files/ENCFF937HVX/@@download/ENCFF937HVX.bigWig hg19 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF809TRB bigWig signal p-value ENCSR000EFW ChIP-seq EFO:0002067 K562 cell line Homo sapiens UBTF-human ENCAB000AMD DNA see document see document False 2012-05-14 ENCODE 2 ENCFF498SAC, ENCFF962ELB 288629135 ENCODE Processing Pipeline 3151c4913bea4eb5d2e251ffcee5d807 https://www.encodeproject.org/files/ENCFF809TRB/@@download/ENCFF809TRB.bigWig hg19 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF867LOU bigWig fold change over control ENCSR000EFW ChIP-seq EFO:0002067 K562 cell line Homo sapiens UBTF-human ENCAB000AMD DNA see document see document False 2012-05-14 ENCODE 2 ENCFF156NSV, ENCFF591IRP 207817707 ENCODE Processing Pipeline 7e319f5cfa6aec6ce2276b131d6ac572 https://www.encodeproject.org/files/ENCFF867LOU/@@download/ENCFF867LOU.bigWig GRCh38 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF651MDN bigWig signal p-value ENCSR000EFW ChIP-seq EFO:0002067 K562 cell line Homo sapiens UBTF-human ENCAB000AMD DNA see document see document False 2012-05-14 ENCODE 2 ENCFF156NSV, ENCFF591IRP 288673015 ENCODE Processing Pipeline 08b9db536d015dc350af5e39a151eef3 https://www.encodeproject.org/files/ENCFF651MDN/@@download/ENCFF651MDN.bigWig GRCh38 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF951TLI bigWig signal p-value ENCSR000EFW ChIP-seq EFO:0002067 K562 cell line Homo sapiens UBTF-human ENCAB000AMD DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF156NSV, ENCFF591IRP, ENCFF708ISS, ENCFF715JBE 521775696 ENCODE Processing Pipeline a615177a444c7f7e5c0b35c345152bcd https://www.encodeproject.org/files/ENCFF951TLI/@@download/ENCFF951TLI.bigWig GRCh38 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF272CDV bigWig signal p-value ENCSR000EFW ChIP-seq EFO:0002067 K562 cell line Homo sapiens UBTF-human ENCAB000AMD DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF498SAC, ENCFF732TLR, ENCFF832GXU, ENCFF962ELB 522311852 ENCODE Processing Pipeline 7ea5e3ae279b6363faf180a029453fd8 https://www.encodeproject.org/files/ENCFF272CDV/@@download/ENCFF272CDV.bigWig hg19 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF379LTX bigWig fold change over control ENCSR000EFW ChIP-seq EFO:0002067 K562 cell line Homo sapiens UBTF-human ENCAB000AMD DNA see document see document False 2012-05-14 ENCODE 2 ENCFF498SAC, ENCFF962ELB 208078567 ENCODE Processing Pipeline ee1de0e97bbe6d87a2ad0836a76d16cb https://www.encodeproject.org/files/ENCFF379LTX/@@download/ENCFF379LTX.bigWig hg19 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF471QLZ bed narrowPeak peaks ENCSR000EFW ChIP-seq EFO:0002067 K562 cell line Homo sapiens UBTF-human ENCAB000AMD DNA see document see document False 2012-05-14 ENCODE 1 ENCFF156NSV, ENCFF708ISS, ENCFF715JBE 4948789 ENCODE Processing Pipeline 54a782c6c8ce225c13aa0b4f49278b4d https://www.encodeproject.org/files/ENCFF471QLZ/@@download/ENCFF471QLZ.bed.gz GRCh38 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF990MNV bigWig fold change over control ENCSR000EFW ChIP-seq EFO:0002067 K562 cell line Homo sapiens UBTF-human ENCAB000AMD DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF156NSV, ENCFF591IRP, ENCFF708ISS, ENCFF715JBE 480052566 ENCODE Processing Pipeline ec03f6b354ae676182c8027529cb3076 https://www.encodeproject.org/files/ENCFF990MNV/@@download/ENCFF990MNV.bigWig GRCh38 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF005KSQ bed narrowPeak conservative idr thresholded peaks ENCSR000EFW ChIP-seq EFO:0002067 K562 cell line Homo sapiens UBTF-human ENCAB000AMD DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF001TDO, ENCFF377VMB, ENCFF696JUU, ENCFF976ZTX 150031 ENCODE Processing Pipeline 1a0975f69c531caeac5562a29f82a9ee https://www.encodeproject.org/files/ENCFF005KSQ/@@download/ENCFF005KSQ.bed.gz hg19 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF281JBI bigBed narrowPeak optimal idr thresholded peaks ENCSR000EFW ChIP-seq EFO:0002067 K562 cell line Homo sapiens UBTF-human ENCAB000AMD DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF938IOJ 421956 ENCODE Processing Pipeline a3f10fb3311827353b65ee88a10e8b5a https://www.encodeproject.org/files/ENCFF281JBI/@@download/ENCFF281JBI.bigBed hg19 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF791ZYV bed narrowPeak peaks ENCSR000EFW ChIP-seq EFO:0002067 K562 cell line Homo sapiens UBTF-human ENCAB000AMD DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF156NSV, ENCFF591IRP, ENCFF708ISS, ENCFF715JBE 5392251 ENCODE Processing Pipeline 3ef8fededa063e3fda77731034960575 https://www.encodeproject.org/files/ENCFF791ZYV/@@download/ENCFF791ZYV.bed.gz GRCh38 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF011MTR bigBed narrowPeak peaks ENCSR000EFW ChIP-seq EFO:0002067 K562 cell line Homo sapiens UBTF-human ENCAB000AMD DNA see document see document False 2012-05-14 ENCODE 2 ENCFF995XED 7433772 ENCODE Processing Pipeline ea42782eb41ac8de15b2421e0cd7a6ff https://www.encodeproject.org/files/ENCFF011MTR/@@download/ENCFF011MTR.bigBed GRCh38 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF927OOF bigBed narrowPeak peaks ENCSR000EFW ChIP-seq EFO:0002067 K562 cell line Homo sapiens UBTF-human ENCAB000AMD DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF377VMB 13274600 ENCODE Processing Pipeline fdd6bb408dbe10ca2940ad4264eb3a42 https://www.encodeproject.org/files/ENCFF927OOF/@@download/ENCFF927OOF.bigBed hg19 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF152VQZ bigBed narrowPeak conservative idr thresholded peaks ENCSR000EFW ChIP-seq EFO:0002067 K562 cell line Homo sapiens UBTF-human ENCAB000AMD DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF005KSQ 369862 ENCODE Processing Pipeline 4d5e0b5c333b8702646e3b6755bb1475 https://www.encodeproject.org/files/ENCFF152VQZ/@@download/ENCFF152VQZ.bigBed hg19 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF427TST bigBed narrowPeak peaks ENCSR000EFW ChIP-seq EFO:0002067 K562 cell line Homo sapiens UBTF-human ENCAB000AMD DNA see document see document False 2012-05-14 ENCODE 1 ENCFF976ZTX 10815375 ENCODE Processing Pipeline 512eff888144cf4472d9351fa0fbfc0f https://www.encodeproject.org/files/ENCFF427TST/@@download/ENCFF427TST.bigBed hg19 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF536RUH bigBed narrowPeak peaks ENCSR000EFW ChIP-seq EFO:0002067 K562 cell line Homo sapiens UBTF-human ENCAB000AMD DNA see document see document False 2012-05-14 ENCODE 2 ENCFF696JUU 9959214 ENCODE Processing Pipeline 79ac50a86c1ab33b18b33bf08963583a https://www.encodeproject.org/files/ENCFF536RUH/@@download/ENCFF536RUH.bigBed hg19 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF938IOJ bed narrowPeak optimal idr thresholded peaks ENCSR000EFW ChIP-seq EFO:0002067 K562 cell line Homo sapiens UBTF-human ENCAB000AMD DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF001TDO, ENCFF377VMB, ENCFF696JUU, ENCFF976ZTX 180556 ENCODE Processing Pipeline c9635f75ccfec61b8087434efc5ee93c https://www.encodeproject.org/files/ENCFF938IOJ/@@download/ENCFF938IOJ.bed.gz hg19 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF995XED bed narrowPeak peaks ENCSR000EFW ChIP-seq EFO:0002067 K562 cell line Homo sapiens UBTF-human ENCAB000AMD DNA see document see document False 2012-05-14 ENCODE 2 ENCFF156NSV, ENCFF591IRP 3660094 ENCODE Processing Pipeline 03502f5fdca0a1f66013478a485bf89d https://www.encodeproject.org/files/ENCFF995XED/@@download/ENCFF995XED.bed.gz GRCh38 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF282JOV bigBed narrowPeak peaks ENCSR000EFW ChIP-seq EFO:0002067 K562 cell line Homo sapiens UBTF-human ENCAB000AMD DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF791ZYV 13297474 ENCODE Processing Pipeline ce9276887e92959354d987e1f3a304a1 https://www.encodeproject.org/files/ENCFF282JOV/@@download/ENCFF282JOV.bigBed GRCh38 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF804STW bigBed narrowPeak peaks ENCSR000EFW ChIP-seq EFO:0002067 K562 cell line Homo sapiens UBTF-human ENCAB000AMD DNA see document see document False 2012-05-14 ENCODE 1 ENCFF471QLZ 10786492 ENCODE Processing Pipeline 9a31dc56824f4d70e0595a2091638b7b https://www.encodeproject.org/files/ENCFF804STW/@@download/ENCFF804STW.bigBed GRCh38 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF729POI bed narrowPeak conservative idr thresholded peaks ENCSR000EFW ChIP-seq EFO:0002067 K562 cell line Homo sapiens UBTF-human ENCAB000AMD DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF419RSJ, ENCFF471QLZ, ENCFF791ZYV, ENCFF995XED 154270 ENCODE Processing Pipeline 1c5f218b91eea4d7a8544ef250a4f2db https://www.encodeproject.org/files/ENCFF729POI/@@download/ENCFF729POI.bed.gz GRCh38 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF398UJQ bigBed narrowPeak optimal idr thresholded peaks ENCSR000EFW ChIP-seq EFO:0002067 K562 cell line Homo sapiens UBTF-human ENCAB000AMD DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF345RRM 416958 ENCODE Processing Pipeline 0b7175c934de8ac6788b98165ae2bd6b https://www.encodeproject.org/files/ENCFF398UJQ/@@download/ENCFF398UJQ.bigBed GRCh38 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF712ZHI bigBed narrowPeak conservative idr thresholded peaks ENCSR000EFW ChIP-seq EFO:0002067 K562 cell line Homo sapiens UBTF-human ENCAB000AMD DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF729POI 377555 ENCODE Processing Pipeline 10ef1af8ac54bfb27d66c01f8b09ae4e https://www.encodeproject.org/files/ENCFF712ZHI/@@download/ENCFF712ZHI.bigBed GRCh38 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF345RRM bed narrowPeak optimal idr thresholded peaks ENCSR000EFW ChIP-seq EFO:0002067 K562 cell line Homo sapiens UBTF-human ENCAB000AMD DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF419RSJ, ENCFF471QLZ, ENCFF791ZYV, ENCFF995XED 176110 ENCODE Processing Pipeline 9e66db53dcd2f86ed247589462858e71 https://www.encodeproject.org/files/ENCFF345RRM/@@download/ENCFF345RRM.bed.gz GRCh38 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF868EAF bam unfiltered alignments ENCSR787RVK ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-TSC22D4-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1 100 ENCFF014DOG, ENCFF284BOO, ENCFF807MUK 8002582729 ENCODE Processing Pipeline 0db5dd185038522ec00999ddebbfe5ca https://www.encodeproject.org/files/ENCFF868EAF/@@download/ENCFF868EAF.bam hg19 released control low read depth, missing genetic modification characterization ENCFF235MBT bam unfiltered alignments ENCSR787RVK ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-TSC22D4-human ENCAB728YTO DNA False 2016-03-02 ENCODE 2 100 ENCFF398EAS, ENCFF493SOQ, ENCFF807MUK 4306691050 ENCODE Processing Pipeline e41985e55a4f1d6cf29f68b0ec8dd52f https://www.encodeproject.org/files/ENCFF235MBT/@@download/ENCFF235MBT.bam hg19 released control low read depth, missing genetic modification characterization ENCFF014DOG fastq reads ENCSR787RVK ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-TSC22D4-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1 1 100 paired-ended 2 ENCFF284BOO 3728365508 Michael Snyder, Stanford 8134996da44c3584dc9ae5c07292be9e SRA:SRR5112096 https://www.encodeproject.org/files/ENCFF014DOG/@@download/ENCFF014DOG.fastq.gz Illumina HiSeq 2000 /files/ENCFF898SRJ/ released control low read depth, missing genetic modification characterization ENCFF493SOQ fastq reads ENCSR787RVK ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-TSC22D4-human ENCAB728YTO DNA False 2016-03-02 ENCODE 2 1 100 paired-ended 1 ENCFF398EAS 1914365016 Michael Snyder, Stanford 77ff95dafcfa488459374b51bcb365ea SRA:SRR5112097 https://www.encodeproject.org/files/ENCFF493SOQ/@@download/ENCFF493SOQ.fastq.gz Illumina HiSeq 2000 /files/ENCFF703OVM/ released control low read depth, missing genetic modification characterization ENCFF398EAS fastq reads ENCSR787RVK ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-TSC22D4-human ENCAB728YTO DNA False 2016-03-02 ENCODE 2 1 100 paired-ended 2 ENCFF493SOQ 1916396074 Michael Snyder, Stanford fc7ccc0071a78c041029b9aa35fc91a4 SRA:SRR5112097 https://www.encodeproject.org/files/ENCFF398EAS/@@download/ENCFF398EAS.fastq.gz Illumina HiSeq 2000 /files/ENCFF898SRJ/ released control low read depth, missing genetic modification characterization ENCFF284BOO fastq reads ENCSR787RVK ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-TSC22D4-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1 1 100 paired-ended 1 ENCFF014DOG 3724180528 Michael Snyder, Stanford 4ef704a81b6c546e232e40f660a0b067 SRA:SRR5112096 https://www.encodeproject.org/files/ENCFF284BOO/@@download/ENCFF284BOO.fastq.gz Illumina HiSeq 2000 /files/ENCFF703OVM/ released control low read depth, missing genetic modification characterization ENCFF143UTJ bam alignments ENCSR787RVK ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-TSC22D4-human ENCAB728YTO DNA False 2016-03-02 ENCODE 2 100 ENCFF398EAS, ENCFF493SOQ, ENCFF807MUK 3697644036 ENCODE Processing Pipeline 6dfc728a5983c5d7b273be0ae109388a https://www.encodeproject.org/files/ENCFF143UTJ/@@download/ENCFF143UTJ.bam hg19 released control low read depth, missing genetic modification characterization ENCFF811OUA bam alignments ENCSR787RVK ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-TSC22D4-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1 100 ENCFF014DOG, ENCFF284BOO, ENCFF807MUK 6770053501 ENCODE Processing Pipeline b626d7a211acd5969cc2dfecb44c0e99 https://www.encodeproject.org/files/ENCFF811OUA/@@download/ENCFF811OUA.bam hg19 released control low read depth, missing genetic modification characterization ENCFF506SIR bigWig signal p-value ENCSR787RVK ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-TSC22D4-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1 ENCFF811OUA, ENCFF930DZH 688394426 ENCODE Processing Pipeline 7b19bb7fafc9f2acb8e210494a71aa37 https://www.encodeproject.org/files/ENCFF506SIR/@@download/ENCFF506SIR.bigWig hg19 released control low read depth, missing genetic modification characterization ENCFF727HEB bigWig signal p-value ENCSR787RVK ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-TSC22D4-human ENCAB728YTO DNA False 2016-03-02 ENCODE 2 ENCFF143UTJ, ENCFF930DZH 704347824 ENCODE Processing Pipeline 84b2d64d45f5000c4a87e58701f51820 https://www.encodeproject.org/files/ENCFF727HEB/@@download/ENCFF727HEB.bigWig hg19 released control low read depth, missing genetic modification characterization ENCFF954PLR bigWig fold change over control ENCSR787RVK ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-TSC22D4-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1 ENCFF811OUA, ENCFF930DZH 1142289005 ENCODE Processing Pipeline 86fa797e9f2315bde69b24602755664c https://www.encodeproject.org/files/ENCFF954PLR/@@download/ENCFF954PLR.bigWig hg19 released control low read depth, missing genetic modification characterization ENCFF780ABV bigWig signal p-value ENCSR787RVK ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-TSC22D4-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF143UTJ, ENCFF811OUA, ENCFF930DZH 670162455 ENCODE Processing Pipeline f05592d5436ea431458c4ca52544dc64 https://www.encodeproject.org/files/ENCFF780ABV/@@download/ENCFF780ABV.bigWig hg19 released control low read depth, missing genetic modification characterization ENCFF247LID bigWig fold change over control ENCSR787RVK ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-TSC22D4-human ENCAB728YTO DNA False 2016-03-02 ENCODE 2 ENCFF143UTJ, ENCFF930DZH 753184631 ENCODE Processing Pipeline 5c7425d8752e060e9d5510e5931ee63d https://www.encodeproject.org/files/ENCFF247LID/@@download/ENCFF247LID.bigWig hg19 released control low read depth, missing genetic modification characterization ENCFF380LKG bigWig fold change over control ENCSR787RVK ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-TSC22D4-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF143UTJ, ENCFF811OUA, ENCFF930DZH 1587950130 ENCODE Processing Pipeline 63a9b28ee9d88dc78d2c34d331a63263 https://www.encodeproject.org/files/ENCFF380LKG/@@download/ENCFF380LKG.bigWig hg19 released control low read depth, missing genetic modification characterization ENCFF575RVG bed narrowPeak peaks ENCSR787RVK ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-TSC22D4-human ENCAB728YTO DNA False 2016-03-02 ENCODE 2 ENCFF143UTJ, ENCFF930DZH 5377635 ENCODE Processing Pipeline 5a7b9d48c880acef56539f484bac771f https://www.encodeproject.org/files/ENCFF575RVG/@@download/ENCFF575RVG.bed.gz hg19 released control low read depth, missing genetic modification characterization ENCFF324NUW bigBed narrowPeak peaks ENCSR787RVK ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-TSC22D4-human ENCAB728YTO DNA False 2016-03-02 ENCODE 2 ENCFF575RVG 11053917 ENCODE Processing Pipeline 1fde344a473789371e658df0a38b5de1 https://www.encodeproject.org/files/ENCFF324NUW/@@download/ENCFF324NUW.bigBed hg19 released control low read depth, missing genetic modification characterization ENCFF597WGL bed narrowPeak peaks ENCSR787RVK ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-TSC22D4-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF143UTJ, ENCFF811OUA, ENCFF930DZH 6898473 ENCODE Processing Pipeline e49f7c3e1565644a28c7115c97376563 https://www.encodeproject.org/files/ENCFF597WGL/@@download/ENCFF597WGL.bed.gz hg19 released control low read depth, missing genetic modification characterization ENCFF225CMV bed narrowPeak peaks ENCSR787RVK ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-TSC22D4-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1 ENCFF811OUA, ENCFF930DZH 6133241 ENCODE Processing Pipeline 61a68c1a03eaf0f52bcfe393211fd5ec https://www.encodeproject.org/files/ENCFF225CMV/@@download/ENCFF225CMV.bed.gz hg19 released control low read depth, missing genetic modification characterization ENCFF297KNZ bigBed narrowPeak peaks ENCSR787RVK ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-TSC22D4-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1 ENCFF225CMV 11114824 ENCODE Processing Pipeline d8690f47feb8ab96d095e3fb47db128a https://www.encodeproject.org/files/ENCFF297KNZ/@@download/ENCFF297KNZ.bigBed hg19 released control low read depth, missing genetic modification characterization ENCFF267OZU bigBed narrowPeak peaks ENCSR787RVK ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-TSC22D4-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF597WGL 11058322 ENCODE Processing Pipeline 960c09a3b00b872ca2402f353471386f https://www.encodeproject.org/files/ENCFF267OZU/@@download/ENCFF267OZU.bigBed hg19 released control low read depth, missing genetic modification characterization ENCFF898IOL bam unfiltered alignments ENCSR787RVK ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-TSC22D4-human ENCAB728YTO DNA False 2016-03-02 ENCODE 2 100 ENCFF398EAS, ENCFF493SOQ, ENCFF643CGH 4313667152 ENCODE Processing Pipeline 21f6e4300e0917d8a4f58ca4a0303d34 https://www.encodeproject.org/files/ENCFF898IOL/@@download/ENCFF898IOL.bam GRCh38 released control low read depth, missing genetic modification characterization ENCFF541FEN bam unfiltered alignments ENCSR787RVK ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-TSC22D4-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1 100 ENCFF014DOG, ENCFF284BOO, ENCFF643CGH 8014838752 ENCODE Processing Pipeline 799278549f410f57219505eec4918b67 https://www.encodeproject.org/files/ENCFF541FEN/@@download/ENCFF541FEN.bam GRCh38 released control low read depth, missing genetic modification characterization ENCFF498EFE bam alignments ENCSR787RVK ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-TSC22D4-human ENCAB728YTO DNA False 2016-03-02 ENCODE 2 100 ENCFF398EAS, ENCFF493SOQ, ENCFF643CGH 3701443888 ENCODE Processing Pipeline c39b60298ec20142f8b332ce95ce8f7c https://www.encodeproject.org/files/ENCFF498EFE/@@download/ENCFF498EFE.bam GRCh38 released control low read depth, missing genetic modification characterization ENCFF302OZO bam alignments ENCSR787RVK ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-TSC22D4-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1 100 ENCFF014DOG, ENCFF284BOO, ENCFF643CGH 6777189763 ENCODE Processing Pipeline 7e64338a9e3ef841c79f325c2694a4f2 https://www.encodeproject.org/files/ENCFF302OZO/@@download/ENCFF302OZO.bam GRCh38 released control low read depth, missing genetic modification characterization ENCFF071FAZ bigWig signal p-value ENCSR787RVK ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-TSC22D4-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1 ENCFF302OZO, ENCFF390ATQ 689509630 ENCODE Processing Pipeline 022df2fbbf4a4dd4780ae0f8c0689b74 https://www.encodeproject.org/files/ENCFF071FAZ/@@download/ENCFF071FAZ.bigWig GRCh38 released control low read depth, missing genetic modification characterization ENCFF532BWG bigWig signal p-value ENCSR787RVK ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-TSC22D4-human ENCAB728YTO DNA False 2016-03-02 ENCODE 2 ENCFF390ATQ, ENCFF498EFE 705570182 ENCODE Processing Pipeline ecd0dde74541117073124fce772bcf6c https://www.encodeproject.org/files/ENCFF532BWG/@@download/ENCFF532BWG.bigWig GRCh38 released control low read depth, missing genetic modification characterization ENCFF157QUC bigWig signal p-value ENCSR787RVK ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-TSC22D4-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF302OZO, ENCFF390ATQ, ENCFF498EFE 671232868 ENCODE Processing Pipeline 4b9d1e940ecd7d937f2e7a9a71808dee https://www.encodeproject.org/files/ENCFF157QUC/@@download/ENCFF157QUC.bigWig GRCh38 released control low read depth, missing genetic modification characterization ENCFF010GVG bigWig fold change over control ENCSR787RVK ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-TSC22D4-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1 ENCFF302OZO, ENCFF390ATQ 1140399739 ENCODE Processing Pipeline ab140349251abc5cd3db534217dfb6a5 https://www.encodeproject.org/files/ENCFF010GVG/@@download/ENCFF010GVG.bigWig GRCh38 released control low read depth, missing genetic modification characterization ENCFF629ITZ bigWig fold change over control ENCSR787RVK ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-TSC22D4-human ENCAB728YTO DNA False 2016-03-02 ENCODE 2 ENCFF390ATQ, ENCFF498EFE 757339408 ENCODE Processing Pipeline 990629422cb8b847da01580aa5adeffe https://www.encodeproject.org/files/ENCFF629ITZ/@@download/ENCFF629ITZ.bigWig GRCh38 released control low read depth, missing genetic modification characterization ENCFF281HGI bigWig fold change over control ENCSR787RVK ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-TSC22D4-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF302OZO, ENCFF390ATQ, ENCFF498EFE 1592389032 ENCODE Processing Pipeline 2c4bb859a31d2d6a30d12f6cf89163f4 https://www.encodeproject.org/files/ENCFF281HGI/@@download/ENCFF281HGI.bigWig GRCh38 released control low read depth, missing genetic modification characterization ENCFF672SIR bigBed narrowPeak peaks ENCSR787RVK ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-TSC22D4-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1 ENCFF500RYU 11112201 ENCODE Processing Pipeline b964d13a4e5f9ed9f6553b556334f95f https://www.encodeproject.org/files/ENCFF672SIR/@@download/ENCFF672SIR.bigBed GRCh38 released control low read depth, missing genetic modification characterization ENCFF431JHH bigBed narrowPeak conservative idr thresholded peaks ENCSR787RVK ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-TSC22D4-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF410PQD 123803 ENCODE Processing Pipeline 28aefdc9bdc5575e68b4fa3571423a15 https://www.encodeproject.org/files/ENCFF431JHH/@@download/ENCFF431JHH.bigBed GRCh38 released control low read depth, missing genetic modification characterization ENCFF467UQI bed narrowPeak peaks ENCSR787RVK ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-TSC22D4-human ENCAB728YTO DNA False 2016-03-02 ENCODE 2 ENCFF390ATQ, ENCFF498EFE 5168427 ENCODE Processing Pipeline 139e1651dd628ccb2ee1f77bbd149d11 https://www.encodeproject.org/files/ENCFF467UQI/@@download/ENCFF467UQI.bed.gz GRCh38 released control low read depth, missing genetic modification characterization ENCFF549AHZ bigBed narrowPeak peaks ENCSR787RVK ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-TSC22D4-human ENCAB728YTO DNA False 2016-03-02 ENCODE 2 ENCFF467UQI 10997705 ENCODE Processing Pipeline 153f0c4c95eaf0e1ba6ff9de39106721 https://www.encodeproject.org/files/ENCFF549AHZ/@@download/ENCFF549AHZ.bigBed GRCh38 released control low read depth, missing genetic modification characterization ENCFF648ZZS bigBed narrowPeak peaks ENCSR787RVK ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-TSC22D4-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF110CRQ 11077505 ENCODE Processing Pipeline eaadb258e9b9230697f0b8b1c2434f2f https://www.encodeproject.org/files/ENCFF648ZZS/@@download/ENCFF648ZZS.bigBed GRCh38 released control low read depth, missing genetic modification characterization ENCFF110CRQ bed narrowPeak peaks ENCSR787RVK ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-TSC22D4-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF302OZO, ENCFF390ATQ, ENCFF498EFE 6781330 ENCODE Processing Pipeline d799a164a6f25b8ec54a5fafc08dee77 https://www.encodeproject.org/files/ENCFF110CRQ/@@download/ENCFF110CRQ.bed.gz GRCh38 released control low read depth, missing genetic modification characterization ENCFF410PQD bed narrowPeak conservative idr thresholded peaks ENCSR787RVK ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-TSC22D4-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF110CRQ, ENCFF419RSJ, ENCFF467UQI, ENCFF500RYU 33274 ENCODE Processing Pipeline ed1684bba1d03a6d92db969ed1a008a7 https://www.encodeproject.org/files/ENCFF410PQD/@@download/ENCFF410PQD.bed.gz GRCh38 released control low read depth, missing genetic modification characterization ENCFF500RYU bed narrowPeak peaks ENCSR787RVK ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-TSC22D4-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1 ENCFF302OZO, ENCFF390ATQ 5924322 ENCODE Processing Pipeline 052f355498512b39faea6df973e48022 https://www.encodeproject.org/files/ENCFF500RYU/@@download/ENCFF500RYU.bed.gz GRCh38 released control low read depth, missing genetic modification characterization ENCFF265QXK bed narrowPeak optimal idr thresholded peaks ENCSR787RVK ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-TSC22D4-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF110CRQ, ENCFF419RSJ, ENCFF467UQI, ENCFF500RYU 60234 ENCODE Processing Pipeline c176aa8d570ea5bfe905c412f1534b96 https://www.encodeproject.org/files/ENCFF265QXK/@@download/ENCFF265QXK.bed.gz GRCh38 released control low read depth, missing genetic modification characterization ENCFF314RBH bigBed narrowPeak optimal idr thresholded peaks ENCSR787RVK ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-TSC22D4-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF265QXK 168863 ENCODE Processing Pipeline acaddb026748f6f89e6d81ae583ad1aa https://www.encodeproject.org/files/ENCFF314RBH/@@download/ENCFF314RBH.bigBed GRCh38 released control low read depth, missing genetic modification characterization ENCFF494TFV bed narrowPeak conservative idr thresholded peaks ENCSR787RVK ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-TSC22D4-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF001TDO, ENCFF225CMV, ENCFF575RVG, ENCFF597WGL 29058 ENCODE Processing Pipeline c4325f3320dcda06b9e1121d4f99f100 https://www.encodeproject.org/files/ENCFF494TFV/@@download/ENCFF494TFV.bed.gz hg19 released control low read depth, missing genetic modification characterization ENCFF666MVK bigBed narrowPeak conservative idr thresholded peaks ENCSR787RVK ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-TSC22D4-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF494TFV 97742 ENCODE Processing Pipeline 8373d2560f107fe8776fdd983d00f2e7 https://www.encodeproject.org/files/ENCFF666MVK/@@download/ENCFF666MVK.bigBed hg19 released control low read depth, missing genetic modification characterization ENCFF806QLF bigBed narrowPeak optimal idr thresholded peaks ENCSR787RVK ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-TSC22D4-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF036YVI 130780 ENCODE Processing Pipeline 564f2698ed65a25444cb445b5c1ae0d6 https://www.encodeproject.org/files/ENCFF806QLF/@@download/ENCFF806QLF.bigBed hg19 released control low read depth, missing genetic modification characterization ENCFF036YVI bed narrowPeak optimal idr thresholded peaks ENCSR787RVK ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-TSC22D4-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF001TDO, ENCFF225CMV, ENCFF575RVG, ENCFF597WGL 52645 ENCODE Processing Pipeline f353a61ba2e6c83a03f221aa38684c44 https://www.encodeproject.org/files/ENCFF036YVI/@@download/ENCFF036YVI.bed.gz hg19 released control low read depth, missing genetic modification characterization ENCFF000YOX fastq reads ENCSR000FAT ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute STAT2-human ENCAB000ALG DNA see document see document False 2011-10-29 ENCODE 1 1 27 single-ended 292423397 Sherman Weissman, Yale 2852f2a7c5fb787291aaf4e3f1fc4e63 https://www.encodeproject.org/files/ENCFF000YOX/@@download/ENCFF000YOX.fastq.gz Illumina Genome Analyzer /files/ENCFF000YOV/ released control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF000YOZ fastq reads ENCSR000FAT ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute STAT2-human ENCAB000ALG DNA see document see document False 2011-10-29 ENCODE 2 1 27 single-ended 515281314 Sherman Weissman, Yale 3c8deec46ced851837cc7e29762a2122 https://www.encodeproject.org/files/ENCFF000YOZ/@@download/ENCFF000YOZ.fastq.gz Illumina Genome Analyzer /files/ENCFF000YOV/ released control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF000ZAI bam alignments ENCSR000FAT ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute STAT2-human ENCAB000ALG DNA see document see document False 2011-10-29 ENCODE 1 ENCFF000YOX 382077060 Sherman Weissman, Yale 8d639a12a92c3bb17f5c10b5b29f2d46 https://www.encodeproject.org/files/ENCFF000ZAI/@@download/ENCFF000ZAI.bam hg19 archived control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF000ZAJ bam alignments ENCSR000FAT ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute STAT2-human ENCAB000ALG DNA see document see document False 2011-10-29 ENCODE 2 ENCFF000YOZ 707081771 Sherman Weissman, Yale e26eb575f95e737004d1f6f408212fb9 https://www.encodeproject.org/files/ENCFF000ZAJ/@@download/ENCFF000ZAJ.bam hg19 archived control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF000ZAK bigBed narrowPeak peaks ENCSR000FAT ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute STAT2-human ENCAB000ALG DNA see document see document False 2011-10-29 ENCODE ENCFF001VOX 95895 Sherman Weissman, Yale 61c9c1664d1a6b718a96cffb46a86456 https://www.encodeproject.org/files/ENCFF000ZAK/@@download/ENCFF000ZAK.bigBed hg19 archived control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF000ZAL bigWig signal ENCSR000FAT ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute STAT2-human ENCAB000ALG DNA see document see document False 2011-10-29 ENCODE 350088040 Sherman Weissman, Yale fc85e0b19cf26940028ebcef53790428 https://www.encodeproject.org/files/ENCFF000ZAL/@@download/ENCFF000ZAL.bigWig hg19 archived control low read depth biological replicates with identical biosample, missing derived_from insufficient read length, insufficient read depth ENCFF001VOX bed narrowPeak peaks ENCSR000FAT ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute STAT2-human ENCAB000ALG DNA see document see document False 2011-10-29 ENCODE 11234 Sherman Weissman, Yale 0e0b41674a2ac38f2a4ddab39d1a3845 https://www.encodeproject.org/files/ENCFF001VOX/@@download/ENCFF001VOX.bed.gz hg19 archived control low read depth biological replicates with identical biosample, missing derived_from insufficient read length, insufficient read depth ENCFF002CYF bed narrowPeak optimal idr thresholded peaks ENCSR000FAT ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute STAT2-human ENCAB000ALG DNA see document see document False 2011-10-29 ENCODE 77558 ENCODE Consortium Analysis Working Group f93fb9e05c31ec08feb48472ef6fddc6 https://www.encodeproject.org/files/ENCFF002CYF/@@download/ENCFF002CYF.bed.gz hg19 archived control low read depth biological replicates with identical biosample, missing derived_from insufficient read length, insufficient read depth ENCFF153AEC bigBed narrowPeak optimal idr thresholded peaks ENCSR000FAT ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute STAT2-human ENCAB000ALG DNA see document see document False 2011-10-29 ENCODE ENCFF002CYF 227372 ENCODE Consortium f4651670b76d5e753a09e40e4b977ccf https://www.encodeproject.org/files/ENCFF153AEC/@@download/ENCFF153AEC.bigBed hg19 archived control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF615CWW bam alignments ENCSR000FAT ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute STAT2-human ENCAB000ALG DNA see document see document False 2011-10-29 ENCODE 1 27 ENCFF000YOX, ENCFF643CGH 227693827 ENCODE Processing Pipeline fe3edd370506bb8060935638d2472ab7 https://www.encodeproject.org/files/ENCFF615CWW/@@download/ENCFF615CWW.bam GRCh38 released control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF469PLV bam unfiltered alignments ENCSR000FAT ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute STAT2-human ENCAB000ALG DNA see document see document False 2011-10-29 ENCODE 1 27 ENCFF000YOX, ENCFF643CGH 383586980 ENCODE Processing Pipeline 3c10359deda073f7716b211e35d6c842 https://www.encodeproject.org/files/ENCFF469PLV/@@download/ENCFF469PLV.bam GRCh38 released control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF259ISF bam unfiltered alignments ENCSR000FAT ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute STAT2-human ENCAB000ALG DNA see document see document False 2011-10-29 ENCODE 1 27 ENCFF000YOX, ENCFF807MUK 382634296 ENCODE Processing Pipeline 1206a140b7e9d0b51c68da4ead3a9f41 https://www.encodeproject.org/files/ENCFF259ISF/@@download/ENCFF259ISF.bam hg19 released control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF936IVO bam alignments ENCSR000FAT ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute STAT2-human ENCAB000ALG DNA see document see document False 2011-10-29 ENCODE 1 27 ENCFF000YOX, ENCFF807MUK 227983430 ENCODE Processing Pipeline e99a9b1672584bbc0b01ff63244853ed https://www.encodeproject.org/files/ENCFF936IVO/@@download/ENCFF936IVO.bam hg19 released control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF752LNO bam unfiltered alignments ENCSR000FAT ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute STAT2-human ENCAB000ALG DNA see document see document False 2011-10-29 ENCODE 2 27 ENCFF000YOZ, ENCFF807MUK 707972775 ENCODE Processing Pipeline 81d39e16a50fe7c908a8c532971bd91a https://www.encodeproject.org/files/ENCFF752LNO/@@download/ENCFF752LNO.bam hg19 released control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF811LRS bam unfiltered alignments ENCSR000FAT ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute STAT2-human ENCAB000ALG DNA see document see document False 2011-10-29 ENCODE 2 27 ENCFF000YOZ, ENCFF643CGH 709980726 ENCODE Processing Pipeline 634323f040179d438da25b4c8832d226 https://www.encodeproject.org/files/ENCFF811LRS/@@download/ENCFF811LRS.bam GRCh38 released control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF972AYH bam alignments ENCSR000FAT ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute STAT2-human ENCAB000ALG DNA see document see document False 2011-10-29 ENCODE 2 27 ENCFF000YOZ, ENCFF807MUK 340325442 ENCODE Processing Pipeline 2f727d7f01af337ea49666821fec34ad https://www.encodeproject.org/files/ENCFF972AYH/@@download/ENCFF972AYH.bam hg19 released control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF940QAP bam alignments ENCSR000FAT ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute STAT2-human ENCAB000ALG DNA see document see document False 2011-10-29 ENCODE 2 27 ENCFF000YOZ, ENCFF643CGH 339891114 ENCODE Processing Pipeline dce2c9e1d9d7dfbc2889cdfdefd0bfd1 https://www.encodeproject.org/files/ENCFF940QAP/@@download/ENCFF940QAP.bam GRCh38 released control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF016IMY bigWig signal p-value ENCSR000FAT ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute STAT2-human ENCAB000ALG DNA see document see document False 2011-10-29 ENCODE 2 ENCFF767FSP, ENCFF940QAP 236701408 ENCODE Processing Pipeline c05710bad6f53d4feb11eafa85f95958 https://www.encodeproject.org/files/ENCFF016IMY/@@download/ENCFF016IMY.bigWig GRCh38 released control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF142KKU bigWig signal p-value ENCSR000FAT ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute STAT2-human ENCAB000ALG DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF650MOB, ENCFF936IVO, ENCFF972AYH 293554447 ENCODE Processing Pipeline 4abdd051ca74d99d9f9f05f92d0d6ef5 https://www.encodeproject.org/files/ENCFF142KKU/@@download/ENCFF142KKU.bigWig hg19 released control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF429ZYF bigWig signal p-value ENCSR000FAT ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute STAT2-human ENCAB000ALG DNA see document see document False 2011-10-29 ENCODE 1 ENCFF650MOB, ENCFF936IVO 271730933 ENCODE Processing Pipeline 5652eaf40d8f4c0fb7bcceded720872e https://www.encodeproject.org/files/ENCFF429ZYF/@@download/ENCFF429ZYF.bigWig hg19 released control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF343UTK bigWig signal p-value ENCSR000FAT ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute STAT2-human ENCAB000ALG DNA see document see document False 2011-10-29 ENCODE 1 ENCFF615CWW, ENCFF767FSP 228640201 ENCODE Processing Pipeline 30c61e12348a78ab04d26a536ed4377d https://www.encodeproject.org/files/ENCFF343UTK/@@download/ENCFF343UTK.bigWig GRCh38 released control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF454WCR bigWig signal p-value ENCSR000FAT ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute STAT2-human ENCAB000ALG DNA see document see document False 2011-10-29 ENCODE 2 ENCFF650MOB, ENCFF972AYH 236920982 ENCODE Processing Pipeline 057c49b416bd9d95a0080489ddec976e https://www.encodeproject.org/files/ENCFF454WCR/@@download/ENCFF454WCR.bigWig hg19 released control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF237CKP bigWig signal p-value ENCSR000FAT ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute STAT2-human ENCAB000ALG DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF615CWW, ENCFF767FSP, ENCFF940QAP 309335084 ENCODE Processing Pipeline 9de0f2a96587a1479d84da51c6c5ba14 https://www.encodeproject.org/files/ENCFF237CKP/@@download/ENCFF237CKP.bigWig GRCh38 released control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF770ESE bigWig fold change over control ENCSR000FAT ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute STAT2-human ENCAB000ALG DNA see document see document False 2011-10-29 ENCODE 1 ENCFF615CWW, ENCFF767FSP 112940675 ENCODE Processing Pipeline c7283deff0dc2ae3b920fa96fce3ca51 https://www.encodeproject.org/files/ENCFF770ESE/@@download/ENCFF770ESE.bigWig GRCh38 released control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF432QFF bigWig fold change over control ENCSR000FAT ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute STAT2-human ENCAB000ALG DNA see document see document False 2011-10-29 ENCODE 2 ENCFF767FSP, ENCFF940QAP 159907162 ENCODE Processing Pipeline e8088ee49308091247ce6108f0826f3d https://www.encodeproject.org/files/ENCFF432QFF/@@download/ENCFF432QFF.bigWig GRCh38 released control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF998JTX bigWig fold change over control ENCSR000FAT ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute STAT2-human ENCAB000ALG DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF615CWW, ENCFF767FSP, ENCFF940QAP 251806966 ENCODE Processing Pipeline b87fd241c48359cb84d3c6df821692ea https://www.encodeproject.org/files/ENCFF998JTX/@@download/ENCFF998JTX.bigWig GRCh38 released control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF602GFA bigWig fold change over control ENCSR000FAT ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute STAT2-human ENCAB000ALG DNA see document see document False 2011-10-29 ENCODE 2 ENCFF650MOB, ENCFF972AYH 160213017 ENCODE Processing Pipeline aa833b50b6401128fe3e24b730ac0d25 https://www.encodeproject.org/files/ENCFF602GFA/@@download/ENCFF602GFA.bigWig hg19 released control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF133YDB bigWig fold change over control ENCSR000FAT ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute STAT2-human ENCAB000ALG DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF650MOB, ENCFF936IVO, ENCFF972AYH 251288011 ENCODE Processing Pipeline 4f89e526884c47590c7c12e3b9f29cd5 https://www.encodeproject.org/files/ENCFF133YDB/@@download/ENCFF133YDB.bigWig hg19 released control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF395EZO bed narrowPeak peaks ENCSR000FAT ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute STAT2-human ENCAB000ALG DNA see document see document False 2011-10-29 ENCODE 1 ENCFF650MOB, ENCFF936IVO 2031796 ENCODE Processing Pipeline 044c3443fb18e648aac8a508ae8bf281 https://www.encodeproject.org/files/ENCFF395EZO/@@download/ENCFF395EZO.bed.gz hg19 released control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF017VWM bigWig fold change over control ENCSR000FAT ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute STAT2-human ENCAB000ALG DNA see document see document False 2011-10-29 ENCODE 1 ENCFF650MOB, ENCFF936IVO 115604525 ENCODE Processing Pipeline f15eac1e7d13d7f3bbb753f813534d36 https://www.encodeproject.org/files/ENCFF017VWM/@@download/ENCFF017VWM.bigWig hg19 released control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF109BMB bed narrowPeak peaks ENCSR000FAT ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute STAT2-human ENCAB000ALG DNA see document see document False 2011-10-29 ENCODE 1 ENCFF615CWW, ENCFF767FSP 2026243 ENCODE Processing Pipeline 354aa2a24bf2870ab9e72ce8652019f2 https://www.encodeproject.org/files/ENCFF109BMB/@@download/ENCFF109BMB.bed.gz GRCh38 released control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF685JSX bed narrowPeak peaks ENCSR000FAT ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute STAT2-human ENCAB000ALG DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF615CWW, ENCFF767FSP, ENCFF940QAP 4460626 ENCODE Processing Pipeline f844a058057a200a29efd1ff7e223242 https://www.encodeproject.org/files/ENCFF685JSX/@@download/ENCFF685JSX.bed.gz GRCh38 released control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF419VTB bigBed narrowPeak peaks ENCSR000FAT ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute STAT2-human ENCAB000ALG DNA see document see document False 2011-10-29 ENCODE 1 ENCFF109BMB 4077536 ENCODE Processing Pipeline 4fe98f9b57b857664a35e0b611eb2508 https://www.encodeproject.org/files/ENCFF419VTB/@@download/ENCFF419VTB.bigBed GRCh38 released control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF255TXX bigBed narrowPeak peaks ENCSR000FAT ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute STAT2-human ENCAB000ALG DNA see document see document False 2011-10-29 ENCODE 2 ENCFF608HRC 7553449 ENCODE Processing Pipeline b38d02bf98ecef7256a85a0b0be96b8d https://www.encodeproject.org/files/ENCFF255TXX/@@download/ENCFF255TXX.bigBed GRCh38 released control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF608HRC bed narrowPeak peaks ENCSR000FAT ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute STAT2-human ENCAB000ALG DNA see document see document False 2011-10-29 ENCODE 2 ENCFF767FSP, ENCFF940QAP 2972550 ENCODE Processing Pipeline d9bb3f32a30df8c6c0c1094477d3345e https://www.encodeproject.org/files/ENCFF608HRC/@@download/ENCFF608HRC.bed.gz GRCh38 released control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF926XFR bed narrowPeak peaks ENCSR000FAT ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute STAT2-human ENCAB000ALG DNA see document see document False 2011-10-29 ENCODE 2 ENCFF650MOB, ENCFF972AYH 2979768 ENCODE Processing Pipeline fa285962e1b274aac8605f7db6eeabb4 https://www.encodeproject.org/files/ENCFF926XFR/@@download/ENCFF926XFR.bed.gz hg19 released control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF054VTQ bed narrowPeak peaks ENCSR000FAT ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute STAT2-human ENCAB000ALG DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF650MOB, ENCFF936IVO, ENCFF972AYH 4433602 ENCODE Processing Pipeline 04b7f3a31a6f8ac0178fa69a9d71f62c https://www.encodeproject.org/files/ENCFF054VTQ/@@download/ENCFF054VTQ.bed.gz hg19 released control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF117KTY bigBed narrowPeak peaks ENCSR000FAT ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute STAT2-human ENCAB000ALG DNA see document see document False 2011-10-29 ENCODE 1 ENCFF395EZO 4081414 ENCODE Processing Pipeline 35ee9fd8a81a4cbfc8e6adbecf06cde9 https://www.encodeproject.org/files/ENCFF117KTY/@@download/ENCFF117KTY.bigBed hg19 released control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF335HBC bigBed narrowPeak peaks ENCSR000FAT ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute STAT2-human ENCAB000ALG DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF054VTQ 10396687 ENCODE Processing Pipeline 36d3559f16db19f35bcb80372733138b https://www.encodeproject.org/files/ENCFF335HBC/@@download/ENCFF335HBC.bigBed hg19 released control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF113RPF bigBed narrowPeak peaks ENCSR000FAT ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute STAT2-human ENCAB000ALG DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF685JSX 10441425 ENCODE Processing Pipeline 5f0fd047de70f12190421897c1a55604 https://www.encodeproject.org/files/ENCFF113RPF/@@download/ENCFF113RPF.bigBed GRCh38 released control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF411TAZ bigBed narrowPeak peaks ENCSR000FAT ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute STAT2-human ENCAB000ALG DNA see document see document False 2011-10-29 ENCODE 2 ENCFF926XFR 7565933 ENCODE Processing Pipeline 53533715232556ee93bbab7cfa37803a https://www.encodeproject.org/files/ENCFF411TAZ/@@download/ENCFF411TAZ.bigBed hg19 released control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF459GKA bigBed narrowPeak optimal idr thresholded peaks ENCSR000FAT ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute STAT2-human ENCAB000ALG DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF204VQS 158487 ENCODE Processing Pipeline 8ee133c2c48419f3a90785fedf328f69 https://www.encodeproject.org/files/ENCFF459GKA/@@download/ENCFF459GKA.bigBed GRCh38 released control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF315IKT bigBed narrowPeak optimal idr thresholded peaks ENCSR000FAT ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute STAT2-human ENCAB000ALG DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF714VIT 159041 ENCODE Processing Pipeline 88f5a738856ea3a3dcdc97aa77221a8f https://www.encodeproject.org/files/ENCFF315IKT/@@download/ENCFF315IKT.bigBed hg19 released control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF204VQS bed narrowPeak optimal idr thresholded peaks ENCSR000FAT ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute STAT2-human ENCAB000ALG DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF109BMB, ENCFF419RSJ, ENCFF608HRC, ENCFF685JSX 66160 ENCODE Processing Pipeline 5496fa50897dda446d76e8e279d6aa60 https://www.encodeproject.org/files/ENCFF204VQS/@@download/ENCFF204VQS.bed.gz GRCh38 released control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF714VIT bed narrowPeak optimal idr thresholded peaks ENCSR000FAT ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute STAT2-human ENCAB000ALG DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF001TDO, ENCFF054VTQ, ENCFF395EZO, ENCFF926XFR 66698 ENCODE Processing Pipeline 6941bc52652563547e46896535a4debe https://www.encodeproject.org/files/ENCFF714VIT/@@download/ENCFF714VIT.bed.gz hg19 released control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF628HBL fastq reads ENCSR325DER ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR3C1-human ENCAB267HGJ DNA False 2018-01-26 ENCODE 1 1 100 paired-ended 1 ENCFF114TJN 1999991318 Michael Snyder, Stanford a6de6d8678c7e6a794546b3eb1cc842c https://www.encodeproject.org/files/ENCFF628HBL/@@download/ENCFF628HBL.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFF/ released low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF940DHI fastq reads ENCSR325DER ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR3C1-human ENCAB267HGJ DNA False 2018-01-26 ENCODE 2 1 100 paired-ended 1 ENCFF798AFN 2075293142 Michael Snyder, Stanford 633c97114b2456779dc73e008f647c32 https://www.encodeproject.org/files/ENCFF940DHI/@@download/ENCFF940DHI.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFD/ released low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF114TJN fastq reads ENCSR325DER ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR3C1-human ENCAB267HGJ DNA False 2018-01-26 ENCODE 1 1 100 paired-ended 2 ENCFF628HBL 2031371550 Michael Snyder, Stanford 5425ebe4995373ef19a7c7e7e40b9323 https://www.encodeproject.org/files/ENCFF114TJN/@@download/ENCFF114TJN.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFH/ released low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF798AFN fastq reads ENCSR325DER ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR3C1-human ENCAB267HGJ DNA False 2018-01-26 ENCODE 2 1 100 paired-ended 2 ENCFF940DHI 2132030081 Michael Snyder, Stanford 1826a40db9a225d6c34c157f323faf0e https://www.encodeproject.org/files/ENCFF798AFN/@@download/ENCFF798AFN.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFA/ released low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF160UAD bam unfiltered alignments ENCSR325DER ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR3C1-human ENCAB267HGJ DNA False 2018-01-26 ENCODE 2 100 ENCFF798AFN, ENCFF807MUK, ENCFF940DHI 4462009781 ENCODE Processing Pipeline 862b2f6536be39d93045cd38696d66ac https://www.encodeproject.org/files/ENCFF160UAD/@@download/ENCFF160UAD.bam hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF293GOS bam unfiltered alignments ENCSR325DER ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR3C1-human ENCAB267HGJ DNA False 2018-01-26 ENCODE 1 100 ENCFF114TJN, ENCFF628HBL, ENCFF643CGH 4112332606 ENCODE Processing Pipeline ae2fd0198d71c79a267faed0ad6ee31d https://www.encodeproject.org/files/ENCFF293GOS/@@download/ENCFF293GOS.bam GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF967QRJ bam unfiltered alignments ENCSR325DER ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR3C1-human ENCAB267HGJ DNA False 2018-01-26 ENCODE 2 100 ENCFF643CGH, ENCFF798AFN, ENCFF940DHI 4464707174 ENCODE Processing Pipeline 48bfce3f30ef26f385a03b8315d213e4 https://www.encodeproject.org/files/ENCFF967QRJ/@@download/ENCFF967QRJ.bam GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF620JJK bam unfiltered alignments ENCSR325DER ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR3C1-human ENCAB267HGJ DNA False 2018-01-26 ENCODE 1 100 ENCFF114TJN, ENCFF628HBL, ENCFF807MUK 4111020886 ENCODE Processing Pipeline 447a768d2bcf7e025054d059f05c0913 https://www.encodeproject.org/files/ENCFF620JJK/@@download/ENCFF620JJK.bam hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF196MMQ bam alignments ENCSR325DER ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR3C1-human ENCAB267HGJ DNA False 2018-01-26 ENCODE 1 100 ENCFF114TJN, ENCFF628HBL, ENCFF643CGH 2701446100 ENCODE Processing Pipeline 192a51cb47d01fa076639ad11963061f https://www.encodeproject.org/files/ENCFF196MMQ/@@download/ENCFF196MMQ.bam GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF844VCV bam alignments ENCSR325DER ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR3C1-human ENCAB267HGJ DNA False 2018-01-26 ENCODE 1 100 ENCFF114TJN, ENCFF628HBL, ENCFF807MUK 2700404609 ENCODE Processing Pipeline 34f0fef1fa5961d1e8a2d96f85b6d7ff https://www.encodeproject.org/files/ENCFF844VCV/@@download/ENCFF844VCV.bam hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF228UIL bam alignments ENCSR325DER ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR3C1-human ENCAB267HGJ DNA False 2018-01-26 ENCODE 2 100 ENCFF643CGH, ENCFF798AFN, ENCFF940DHI 3410587014 ENCODE Processing Pipeline 65aed075dd2794a8abb688e7d352283c https://www.encodeproject.org/files/ENCFF228UIL/@@download/ENCFF228UIL.bam GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF064POH bam alignments ENCSR325DER ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR3C1-human ENCAB267HGJ DNA False 2018-01-26 ENCODE 2 100 ENCFF798AFN, ENCFF807MUK, ENCFF940DHI 3409160303 ENCODE Processing Pipeline 3fdf3a6216b7719dbb18e33cc8269cba https://www.encodeproject.org/files/ENCFF064POH/@@download/ENCFF064POH.bam hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF359KRH bed narrowPeak peaks ENCSR325DER ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR3C1-human ENCAB267HGJ DNA False 2018-01-26 ENCODE 2 ENCFF227IZS, ENCFF228UIL 6192376 ENCODE Processing Pipeline dcef7a7502710d623f500f8fe1cfc586 https://www.encodeproject.org/files/ENCFF359KRH/@@download/ENCFF359KRH.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF653BTY bigWig fold change over control ENCSR325DER ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR3C1-human ENCAB267HGJ DNA False 2018-01-26 ENCODE 2 ENCFF227IZS, ENCFF228UIL 1076469372 ENCODE Processing Pipeline 21f127d6a31eb91fd2e0b4b7b8dff34b https://www.encodeproject.org/files/ENCFF653BTY/@@download/ENCFF653BTY.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF452PDH bigWig fold change over control ENCSR325DER ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR3C1-human ENCAB267HGJ DNA False 2018-01-26 ENCODE 1, 2 ENCFF196MMQ, ENCFF227IZS, ENCFF228UIL, ENCFF910IKB 1922590239 ENCODE Processing Pipeline 0869b418cdc94bcbeb5a6505bdd2960e https://www.encodeproject.org/files/ENCFF452PDH/@@download/ENCFF452PDH.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF788IWU bigBed narrowPeak conservative idr thresholded peaks ENCSR325DER ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR3C1-human ENCAB267HGJ DNA False 2018-01-26 ENCODE 1, 2 ENCFF474QSX 111097 ENCODE Processing Pipeline 71a73d456770e4d7006f87a5f4cf01e6 https://www.encodeproject.org/files/ENCFF788IWU/@@download/ENCFF788IWU.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF215OYX bigWig signal p-value ENCSR325DER ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR3C1-human ENCAB267HGJ DNA False 2018-01-26 ENCODE 2 ENCFF227IZS, ENCFF228UIL 1091086934 ENCODE Processing Pipeline 72c1746eadcd25fdfae3142d7aa22e57 https://www.encodeproject.org/files/ENCFF215OYX/@@download/ENCFF215OYX.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF913WVP bed narrowPeak peaks ENCSR325DER ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR3C1-human ENCAB267HGJ DNA False 2018-01-26 ENCODE 1, 2 ENCFF196MMQ, ENCFF227IZS, ENCFF228UIL, ENCFF910IKB 7071799 ENCODE Processing Pipeline 18ef52db7abb2dc09106e3fba5997d6c https://www.encodeproject.org/files/ENCFF913WVP/@@download/ENCFF913WVP.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF338CIC bigBed narrowPeak peaks ENCSR325DER ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR3C1-human ENCAB267HGJ DNA False 2018-01-26 ENCODE 2 ENCFF359KRH 11090228 ENCODE Processing Pipeline 16df21c3d2eea5863f1e73baf06a54b5 https://www.encodeproject.org/files/ENCFF338CIC/@@download/ENCFF338CIC.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF564YVO bigBed narrowPeak optimal idr thresholded peaks ENCSR325DER ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR3C1-human ENCAB267HGJ DNA False 2018-01-26 ENCODE 1, 2 ENCFF315MUH 149018 ENCODE Processing Pipeline 274a866dcf71510cef577e413d5f3d51 https://www.encodeproject.org/files/ENCFF564YVO/@@download/ENCFF564YVO.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF350AXL bigWig signal p-value ENCSR325DER ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR3C1-human ENCAB267HGJ DNA False 2018-01-26 ENCODE 1 ENCFF196MMQ, ENCFF910IKB 916631359 ENCODE Processing Pipeline 8f753ab8143672c2276bde5893d86175 https://www.encodeproject.org/files/ENCFF350AXL/@@download/ENCFF350AXL.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF106YYE bigBed narrowPeak peaks ENCSR325DER ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR3C1-human ENCAB267HGJ DNA False 2018-01-26 ENCODE 1, 2 ENCFF913WVP 13173520 ENCODE Processing Pipeline 7a5e006ea4830c3480927e5434ad4a84 https://www.encodeproject.org/files/ENCFF106YYE/@@download/ENCFF106YYE.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF474QSX bed narrowPeak conservative idr thresholded peaks ENCSR325DER ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR3C1-human ENCAB267HGJ DNA False 2018-01-26 ENCODE 1, 2 ENCFF359KRH, ENCFF419RSJ, ENCFF913WVP, ENCFF932WAP 24956 ENCODE Processing Pipeline e5423e4269ae7a3dca53bfd0b7078af8 https://www.encodeproject.org/files/ENCFF474QSX/@@download/ENCFF474QSX.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF084RSA bigWig fold change over control ENCSR325DER ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR3C1-human ENCAB267HGJ DNA False 2018-01-26 ENCODE 1 ENCFF196MMQ, ENCFF910IKB 944135861 ENCODE Processing Pipeline a156d212b8a230d49a3371d3ca7a0863 https://www.encodeproject.org/files/ENCFF084RSA/@@download/ENCFF084RSA.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF665JUG bigWig signal p-value ENCSR325DER ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR3C1-human ENCAB267HGJ DNA False 2018-01-26 ENCODE 1, 2 ENCFF196MMQ, ENCFF227IZS, ENCFF228UIL, ENCFF910IKB 1908025952 ENCODE Processing Pipeline 7df7a771ca46d2f023096b35f49679d7 https://www.encodeproject.org/files/ENCFF665JUG/@@download/ENCFF665JUG.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF932WAP bed narrowPeak peaks ENCSR325DER ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR3C1-human ENCAB267HGJ DNA False 2018-01-26 ENCODE 1 ENCFF196MMQ, ENCFF910IKB 6046942 ENCODE Processing Pipeline 2edac0bedb26f5ecee14b9a2f83a74a9 https://www.encodeproject.org/files/ENCFF932WAP/@@download/ENCFF932WAP.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF958BSK bigBed narrowPeak peaks ENCSR325DER ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR3C1-human ENCAB267HGJ DNA False 2018-01-26 ENCODE 1 ENCFF932WAP 11158756 ENCODE Processing Pipeline f582caa378a3ab4b688c7b29703c5a0d https://www.encodeproject.org/files/ENCFF958BSK/@@download/ENCFF958BSK.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF315MUH bed narrowPeak optimal idr thresholded peaks ENCSR325DER ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR3C1-human ENCAB267HGJ DNA False 2018-01-26 ENCODE 1, 2 ENCFF359KRH, ENCFF419RSJ, ENCFF913WVP, ENCFF932WAP 46528 ENCODE Processing Pipeline 5e76f902cc00cb2c1a6d7123b4dbc9d7 https://www.encodeproject.org/files/ENCFF315MUH/@@download/ENCFF315MUH.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF401AVG bigWig signal p-value ENCSR325DER ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR3C1-human ENCAB267HGJ DNA False 2018-01-26 ENCODE 1, 2 ENCFF051LWI, ENCFF064POH, ENCFF581ZJL, ENCFF844VCV 1821195398 ENCODE Processing Pipeline 90cf67580936a4c720026b9bb1ba4f0d https://www.encodeproject.org/files/ENCFF401AVG/@@download/ENCFF401AVG.bigWig hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF490RDH bigWig fold change over control ENCSR325DER ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR3C1-human ENCAB267HGJ DNA False 2018-01-26 ENCODE 2 ENCFF051LWI, ENCFF064POH 1083828472 ENCODE Processing Pipeline 0a628ef4e6fd5db900d257d29ad5b210 https://www.encodeproject.org/files/ENCFF490RDH/@@download/ENCFF490RDH.bigWig hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF155WDG bigBed narrowPeak peaks ENCSR325DER ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR3C1-human ENCAB267HGJ DNA False 2018-01-26 ENCODE 1 ENCFF037BJD 11149613 ENCODE Processing Pipeline 1a173ea8e88be44921165d1d17a7dcf2 https://www.encodeproject.org/files/ENCFF155WDG/@@download/ENCFF155WDG.bigBed hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF821VZB bigBed narrowPeak conservative idr thresholded peaks ENCSR325DER ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR3C1-human ENCAB267HGJ DNA False 2018-01-26 ENCODE 1, 2 ENCFF571LPJ 109945 ENCODE Processing Pipeline 86a20797205cc46c52391fe9c3374036 https://www.encodeproject.org/files/ENCFF821VZB/@@download/ENCFF821VZB.bigBed hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF795JVL bigWig fold change over control ENCSR325DER ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR3C1-human ENCAB267HGJ DNA False 2018-01-26 ENCODE 1 ENCFF581ZJL, ENCFF844VCV 939156079 ENCODE Processing Pipeline 794641b88029bcdc1dc5c24109e41750 https://www.encodeproject.org/files/ENCFF795JVL/@@download/ENCFF795JVL.bigWig hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF793DLG bed narrowPeak peaks ENCSR325DER ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR3C1-human ENCAB267HGJ DNA False 2018-01-26 ENCODE 1, 2 ENCFF051LWI, ENCFF064POH, ENCFF581ZJL, ENCFF844VCV 7070418 ENCODE Processing Pipeline a4930ee85a6863d8332bc694c92ff0a4 https://www.encodeproject.org/files/ENCFF793DLG/@@download/ENCFF793DLG.bed.gz hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF863DJF bigWig signal p-value ENCSR325DER ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR3C1-human ENCAB267HGJ DNA False 2018-01-26 ENCODE 2 ENCFF051LWI, ENCFF064POH 1007044695 ENCODE Processing Pipeline 36268ff0c4371ffd38de0c4a95631005 https://www.encodeproject.org/files/ENCFF863DJF/@@download/ENCFF863DJF.bigWig hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF697SKV bigBed narrowPeak peaks ENCSR325DER ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR3C1-human ENCAB267HGJ DNA False 2018-01-26 ENCODE 1, 2 ENCFF793DLG 13164557 ENCODE Processing Pipeline 63d07c8482294cb95c61292903db0a25 https://www.encodeproject.org/files/ENCFF697SKV/@@download/ENCFF697SKV.bigBed hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF784FIE bed narrowPeak optimal idr thresholded peaks ENCSR325DER ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR3C1-human ENCAB267HGJ DNA False 2018-01-26 ENCODE 1, 2 ENCFF001TDO, ENCFF037BJD, ENCFF261TNJ, ENCFF793DLG 46890 ENCODE Processing Pipeline 27585931a99c4d1c463cb076f662bc3b https://www.encodeproject.org/files/ENCFF784FIE/@@download/ENCFF784FIE.bed.gz hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF111HPF bigWig signal p-value ENCSR325DER ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR3C1-human ENCAB267HGJ DNA False 2018-01-26 ENCODE 1 ENCFF581ZJL, ENCFF844VCV 1051027075 ENCODE Processing Pipeline c5b947be71b280abeedff3b361c511df https://www.encodeproject.org/files/ENCFF111HPF/@@download/ENCFF111HPF.bigWig hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF037BJD bed narrowPeak peaks ENCSR325DER ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR3C1-human ENCAB267HGJ DNA False 2018-01-26 ENCODE 1 ENCFF581ZJL, ENCFF844VCV 6046939 ENCODE Processing Pipeline d2b5c4be0b5525b49291ebf01a7449b5 https://www.encodeproject.org/files/ENCFF037BJD/@@download/ENCFF037BJD.bed.gz hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF774QKI bigBed narrowPeak peaks ENCSR325DER ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR3C1-human ENCAB267HGJ DNA False 2018-01-26 ENCODE 2 ENCFF261TNJ 11077220 ENCODE Processing Pipeline 655fc111cf811029f9960204dc10b136 https://www.encodeproject.org/files/ENCFF774QKI/@@download/ENCFF774QKI.bigBed hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF571LPJ bed narrowPeak conservative idr thresholded peaks ENCSR325DER ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR3C1-human ENCAB267HGJ DNA False 2018-01-26 ENCODE 1, 2 ENCFF001TDO, ENCFF037BJD, ENCFF261TNJ, ENCFF793DLG 25136 ENCODE Processing Pipeline 16588cdb4c659397d5ce189e3b889f14 https://www.encodeproject.org/files/ENCFF571LPJ/@@download/ENCFF571LPJ.bed.gz hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF720NCF bigWig fold change over control ENCSR325DER ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR3C1-human ENCAB267HGJ DNA False 2018-01-26 ENCODE 1, 2 ENCFF051LWI, ENCFF064POH, ENCFF581ZJL, ENCFF844VCV 1925304518 ENCODE Processing Pipeline bfeec79f31a5c120b8bceaec02ae3b24 https://www.encodeproject.org/files/ENCFF720NCF/@@download/ENCFF720NCF.bigWig hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF261TNJ bed narrowPeak peaks ENCSR325DER ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR3C1-human ENCAB267HGJ DNA False 2018-01-26 ENCODE 2 ENCFF051LWI, ENCFF064POH 6196483 ENCODE Processing Pipeline 9671e3446e9e32e48a778781a5077bde https://www.encodeproject.org/files/ENCFF261TNJ/@@download/ENCFF261TNJ.bed.gz hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF072AAR bigBed narrowPeak optimal idr thresholded peaks ENCSR325DER ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR3C1-human ENCAB267HGJ DNA False 2018-01-26 ENCODE 1, 2 ENCFF784FIE 148892 ENCODE Processing Pipeline e374329e60a622583aaf35f0ce5ae4b0 https://www.encodeproject.org/files/ENCFF072AAR/@@download/ENCFF072AAR.bigBed hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF000ZEZ bigBed narrowPeak peaks ENCSR000EFP ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF384-human ENCAB000AMW DNA see document see document False 2012-08-20 ENCODE ENCFF001VPP 3414323 Michael Snyder, Stanford 2d0a793ee08669f3499db06de41ec757 https://www.encodeproject.org/files/ENCFF000ZEZ/@@download/ENCFF000ZEZ.bigBed hg19 archived low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF000ZFA bam alignments ENCSR000EFP ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF384-human ENCAB000AMW DNA see document see document False 2012-08-20 ENCODE 1 1 495654808 Michael Snyder, Stanford 306d3ebb6655a86514deeffc095f9b9c https://www.encodeproject.org/files/ENCFF000ZFA/@@download/ENCFF000ZFA.bam hg19 archived low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample, missing derived_from ENCFF000ZFB fastq reads ENCSR000EFP ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF384-human ENCAB000AMW DNA see document see document False 2012-08-20 ENCODE 1 1 36 single-ended 878866928 Michael Snyder, Stanford a25816c207106bb2953fcf5363934d7c https://www.encodeproject.org/files/ENCFF000ZFB/@@download/ENCFF000ZFB.fastq.gz Illumina Genome Analyzer /files/ENCFF000YRB/ released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF000ZFD fastq reads ENCSR000EFP ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF384-human ENCAB000AMW DNA see document see document False 2012-08-20 ENCODE 2 1 36 single-ended 814763302 Michael Snyder, Stanford dbb6a5c7576405f925b6a17f252e6edd https://www.encodeproject.org/files/ENCFF000ZFD/@@download/ENCFF000ZFD.fastq.gz Illumina Genome Analyzer /files/ENCFF000YRB/ released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF000ZFF bigWig signal ENCSR000EFP ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF384-human ENCAB000AMW DNA see document see document False 2012-08-20 ENCODE 361994707 Michael Snyder, Stanford 69e0a03b7a79540b5e248d6d168c511c https://www.encodeproject.org/files/ENCFF000ZFF/@@download/ENCFF000ZFF.bigWig hg19 archived low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample, missing derived_from ENCFF000ZFG bam alignments ENCSR000EFP ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF384-human ENCAB000AMW DNA see document see document False 2012-08-20 ENCODE 2 1 467333331 Michael Snyder, Stanford fe10223f1733ebe2cdabfd18cccf5f80 https://www.encodeproject.org/files/ENCFF000ZFG/@@download/ENCFF000ZFG.bam hg19 archived low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample, missing derived_from ENCFF001VPP bed narrowPeak peaks ENCSR000EFP ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF384-human ENCAB000AMW DNA see document see document False 2012-08-20 ENCODE 1353696 Michael Snyder, Stanford 306c904ab969183a2dbaf7482691ec1d https://www.encodeproject.org/files/ENCFF001VPP/@@download/ENCFF001VPP.bed.gz hg19 archived low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample, missing derived_from ENCFF576HJC bam unfiltered alignments ENCSR000EFP ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF384-human ENCAB000AMW DNA see document see document False 2012-08-20 ENCODE 1 36 ENCFF000ZFB, ENCFF643CGH 1011766010 ENCODE Processing Pipeline 27d7a7cb818d48856a0c14cdbbe9aaeb https://www.encodeproject.org/files/ENCFF576HJC/@@download/ENCFF576HJC.bam GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF140ZMN bam alignments ENCSR000EFP ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF384-human ENCAB000AMW DNA see document see document False 2012-08-20 ENCODE 1 36 ENCFF000ZFB, ENCFF643CGH 676829144 ENCODE Processing Pipeline a08d579878c6878a2013de22217a6859 https://www.encodeproject.org/files/ENCFF140ZMN/@@download/ENCFF140ZMN.bam GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF920KZH bam unfiltered alignments ENCSR000EFP ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF384-human ENCAB000AMW DNA see document see document False 2012-08-20 ENCODE 2 36 ENCFF000ZFD, ENCFF643CGH 942400949 ENCODE Processing Pipeline 384b5e600301827a476418f9fc003ef9 https://www.encodeproject.org/files/ENCFF920KZH/@@download/ENCFF920KZH.bam GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF171VBC bam alignments ENCSR000EFP ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF384-human ENCAB000AMW DNA see document see document False 2012-08-20 ENCODE 2 36 ENCFF000ZFD, ENCFF643CGH 637309879 ENCODE Processing Pipeline 7b4d15b1a5e86bd618423e13dc890cc4 https://www.encodeproject.org/files/ENCFF171VBC/@@download/ENCFF171VBC.bam GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF447POJ bam alignments ENCSR000EFP ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF384-human ENCAB000AMW DNA see document see document False 2012-08-20 ENCODE 1 36 ENCFF000ZFB, ENCFF807MUK 677322179 ENCODE Processing Pipeline 9c9942d11919f44c8be423a2eda9bdda https://www.encodeproject.org/files/ENCFF447POJ/@@download/ENCFF447POJ.bam hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF198ERA bam unfiltered alignments ENCSR000EFP ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF384-human ENCAB000AMW DNA see document see document False 2012-08-20 ENCODE 2 36 ENCFF000ZFD, ENCFF807MUK 939515373 ENCODE Processing Pipeline f5ef20949c44adacf6cbcd8507d9811e https://www.encodeproject.org/files/ENCFF198ERA/@@download/ENCFF198ERA.bam hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF134QYH bam alignments ENCSR000EFP ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF384-human ENCAB000AMW DNA see document see document False 2012-08-20 ENCODE 2 36 ENCFF000ZFD, ENCFF807MUK 637841517 ENCODE Processing Pipeline fdc028e481babf82746f0289d11d2de6 https://www.encodeproject.org/files/ENCFF134QYH/@@download/ENCFF134QYH.bam hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF223EGE bam unfiltered alignments ENCSR000EFP ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF384-human ENCAB000AMW DNA see document see document False 2012-08-20 ENCODE 1 36 ENCFF000ZFB, ENCFF807MUK 1008367909 ENCODE Processing Pipeline 002ce3d5e18585c9aee8e6714c60d9ae https://www.encodeproject.org/files/ENCFF223EGE/@@download/ENCFF223EGE.bam hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF041XPD bigWig signal p-value ENCSR000EFP ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF384-human ENCAB000AMW DNA see document see document False 2012-08-20 ENCODE 1 ENCFF023NGN, ENCFF140ZMN 475147143 ENCODE Processing Pipeline 7497649037f143084d5a58327da02164 https://www.encodeproject.org/files/ENCFF041XPD/@@download/ENCFF041XPD.bigWig GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF215NEN bigWig signal p-value ENCSR000EFP ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF384-human ENCAB000AMW DNA see document see document False 2012-08-20 ENCODE 2 ENCFF023NGN, ENCFF171VBC 534651764 ENCODE Processing Pipeline f4bf58a40825d6edf5f41305d8175bf4 https://www.encodeproject.org/files/ENCFF215NEN/@@download/ENCFF215NEN.bigWig GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF799SDR bigWig fold change over control ENCSR000EFP ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF384-human ENCAB000AMW DNA see document see document False 2012-08-20 ENCODE 1 ENCFF023NGN, ENCFF140ZMN 349270195 ENCODE Processing Pipeline 2e18106b2152a7912b3125108bffb5e9 https://www.encodeproject.org/files/ENCFF799SDR/@@download/ENCFF799SDR.bigWig GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF201EBM bigWig signal p-value ENCSR000EFP ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF384-human ENCAB000AMW DNA see document see document False 2012-08-20 ENCODE 1, 2 ENCFF023NGN, ENCFF140ZMN, ENCFF171VBC 576623081 ENCODE Processing Pipeline 6be1ac060a0301ae338b4714c420cd4e https://www.encodeproject.org/files/ENCFF201EBM/@@download/ENCFF201EBM.bigWig GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF421EAZ bigWig fold change over control ENCSR000EFP ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF384-human ENCAB000AMW DNA see document see document False 2012-08-20 ENCODE 2 ENCFF023NGN, ENCFF171VBC 335210611 ENCODE Processing Pipeline ba459aae305bbbdc649cc8a5ff3be604 https://www.encodeproject.org/files/ENCFF421EAZ/@@download/ENCFF421EAZ.bigWig GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF540SQX bigWig fold change over control ENCSR000EFP ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF384-human ENCAB000AMW DNA see document see document False 2012-08-20 ENCODE 1, 2 ENCFF023NGN, ENCFF140ZMN, ENCFF171VBC 613013586 ENCODE Processing Pipeline 62e29a144e9d192540656bd9cabf2562 https://www.encodeproject.org/files/ENCFF540SQX/@@download/ENCFF540SQX.bigWig GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF898RKR bed narrowPeak peaks ENCSR000EFP ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF384-human ENCAB000AMW DNA see document see document False 2012-08-20 ENCODE 2 ENCFF023NGN, ENCFF171VBC 4923181 ENCODE Processing Pipeline de6b6be8d061ae1b06c2179df6498352 https://www.encodeproject.org/files/ENCFF898RKR/@@download/ENCFF898RKR.bed.gz GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF920ITB bed narrowPeak peaks ENCSR000EFP ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF384-human ENCAB000AMW DNA see document see document False 2012-08-20 ENCODE 1 ENCFF023NGN, ENCFF140ZMN 4907183 ENCODE Processing Pipeline 013431a479101f094aae9650c5b41848 https://www.encodeproject.org/files/ENCFF920ITB/@@download/ENCFF920ITB.bed.gz GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF933XAT bigBed narrowPeak peaks ENCSR000EFP ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF384-human ENCAB000AMW DNA see document see document False 2012-08-20 ENCODE 2 ENCFF898RKR 10801900 ENCODE Processing Pipeline c128bbed742c57d5d3ae2eb75a073232 https://www.encodeproject.org/files/ENCFF933XAT/@@download/ENCFF933XAT.bigBed GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF595ZFJ bed narrowPeak peaks ENCSR000EFP ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF384-human ENCAB000AMW DNA see document see document False 2012-08-20 ENCODE 1, 2 ENCFF023NGN, ENCFF140ZMN, ENCFF171VBC 5540085 ENCODE Processing Pipeline fd8c7ce7aefb330bf2dac01816929c04 https://www.encodeproject.org/files/ENCFF595ZFJ/@@download/ENCFF595ZFJ.bed.gz GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF338NPC bigBed narrowPeak peaks ENCSR000EFP ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF384-human ENCAB000AMW DNA see document see document False 2012-08-20 ENCODE 1 ENCFF920ITB 10834225 ENCODE Processing Pipeline f4db6fb71b6ddc54c985ea3245e3d54b https://www.encodeproject.org/files/ENCFF338NPC/@@download/ENCFF338NPC.bigBed GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF875OOD bigBed narrowPeak peaks ENCSR000EFP ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF384-human ENCAB000AMW DNA see document see document False 2012-08-20 ENCODE 1, 2 ENCFF595ZFJ 12679258 ENCODE Processing Pipeline 32a6b8224af6b31cc7bdca227e737d2c https://www.encodeproject.org/files/ENCFF875OOD/@@download/ENCFF875OOD.bigBed GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF304LQU bigBed narrowPeak conservative idr thresholded peaks ENCSR000EFP ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF384-human ENCAB000AMW DNA see document see document False 2012-08-20 ENCODE 1, 2 ENCFF567XKS 635120 ENCODE Processing Pipeline 35d83e24c5bbacb966f964e06266ff8f https://www.encodeproject.org/files/ENCFF304LQU/@@download/ENCFF304LQU.bigBed GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF567XKS bed narrowPeak conservative idr thresholded peaks ENCSR000EFP ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF384-human ENCAB000AMW DNA see document see document False 2012-08-20 ENCODE 1, 2 ENCFF419RSJ, ENCFF595ZFJ, ENCFF898RKR, ENCFF920ITB 343008 ENCODE Processing Pipeline a26aa5495638da3dad92f943c4f2124d https://www.encodeproject.org/files/ENCFF567XKS/@@download/ENCFF567XKS.bed.gz GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF106YXG bed narrowPeak optimal idr thresholded peaks ENCSR000EFP ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF384-human ENCAB000AMW DNA see document see document False 2012-08-20 ENCODE 1, 2 ENCFF419RSJ, ENCFF595ZFJ, ENCFF898RKR, ENCFF920ITB 355876 ENCODE Processing Pipeline 76abd36bb30120ad7ee294693c18f569 https://www.encodeproject.org/files/ENCFF106YXG/@@download/ENCFF106YXG.bed.gz GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF028JHS bigBed narrowPeak optimal idr thresholded peaks ENCSR000EFP ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF384-human ENCAB000AMW DNA see document see document False 2012-08-20 ENCODE 1, 2 ENCFF106YXG 652482 ENCODE Processing Pipeline 1615efe518c3da79fd8550d3d1d3ed1a https://www.encodeproject.org/files/ENCFF028JHS/@@download/ENCFF028JHS.bigBed GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF649GSX bigWig signal p-value ENCSR000EFP ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF384-human ENCAB000AMW DNA see document see document False 2012-08-20 ENCODE 1 ENCFF447POJ, ENCFF710NTS 444116439 ENCODE Processing Pipeline b423b44f6f9c7e0f8ded64447082093c https://www.encodeproject.org/files/ENCFF649GSX/@@download/ENCFF649GSX.bigWig hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF593NOC bigWig fold change over control ENCSR000EFP ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF384-human ENCAB000AMW DNA see document see document False 2012-08-20 ENCODE 1 ENCFF447POJ, ENCFF710NTS 346288269 ENCODE Processing Pipeline f1ae61e020f6da7810c2e42c8c090c2a https://www.encodeproject.org/files/ENCFF593NOC/@@download/ENCFF593NOC.bigWig hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF910DVF bigWig signal p-value ENCSR000EFP ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF384-human ENCAB000AMW DNA see document see document False 2012-08-20 ENCODE 2 ENCFF134QYH, ENCFF710NTS 469212232 ENCODE Processing Pipeline 45518db7b18a9d27bffdea892b1ce6a3 https://www.encodeproject.org/files/ENCFF910DVF/@@download/ENCFF910DVF.bigWig hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF342OIT bigWig signal p-value ENCSR000EFP ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF384-human ENCAB000AMW DNA see document see document False 2012-08-20 ENCODE 1, 2 ENCFF134QYH, ENCFF447POJ, ENCFF710NTS 576946346 ENCODE Processing Pipeline aa13eca17ca270851bb88a636147dba4 https://www.encodeproject.org/files/ENCFF342OIT/@@download/ENCFF342OIT.bigWig hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF161NHL bigWig fold change over control ENCSR000EFP ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF384-human ENCAB000AMW DNA see document see document False 2012-08-20 ENCODE 2 ENCFF134QYH, ENCFF710NTS 336740430 ENCODE Processing Pipeline 22940bbb538b2c8c96931c6f18ae405a https://www.encodeproject.org/files/ENCFF161NHL/@@download/ENCFF161NHL.bigWig hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF657QMO bigWig fold change over control ENCSR000EFP ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF384-human ENCAB000AMW DNA see document see document False 2012-08-20 ENCODE 1, 2 ENCFF134QYH, ENCFF447POJ, ENCFF710NTS 610817927 ENCODE Processing Pipeline 3b2cff4e944986e602bda81ff69d14b4 https://www.encodeproject.org/files/ENCFF657QMO/@@download/ENCFF657QMO.bigWig hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF884GTB bigBed narrowPeak peaks ENCSR000EFP ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF384-human ENCAB000AMW DNA see document see document False 2012-08-20 ENCODE 1 ENCFF319WWO 10822815 ENCODE Processing Pipeline 23d90c3aa5c1a9e861c3d5944c573efa https://www.encodeproject.org/files/ENCFF884GTB/@@download/ENCFF884GTB.bigBed hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF641YZX bed narrowPeak conservative idr thresholded peaks ENCSR000EFP ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF384-human ENCAB000AMW DNA see document see document False 2012-08-20 ENCODE 1, 2 ENCFF001TDO, ENCFF319WWO, ENCFF722BEI, ENCFF913KLO 343079 ENCODE Processing Pipeline 2e1884b2030cacb53500cc2c5b9b11f0 https://www.encodeproject.org/files/ENCFF641YZX/@@download/ENCFF641YZX.bed.gz hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF664BGP bigBed narrowPeak optimal idr thresholded peaks ENCSR000EFP ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF384-human ENCAB000AMW DNA see document see document False 2012-08-20 ENCODE 1, 2 ENCFF706SJZ 650288 ENCODE Processing Pipeline 86e182900468d2ffbe92f879124c8111 https://www.encodeproject.org/files/ENCFF664BGP/@@download/ENCFF664BGP.bigBed hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF319WWO bed narrowPeak peaks ENCSR000EFP ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF384-human ENCAB000AMW DNA see document see document False 2012-08-20 ENCODE 1 ENCFF447POJ, ENCFF710NTS 4912704 ENCODE Processing Pipeline 3a6b86cbec7a587932391516e814c285 https://www.encodeproject.org/files/ENCFF319WWO/@@download/ENCFF319WWO.bed.gz hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF722BEI bed narrowPeak peaks ENCSR000EFP ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF384-human ENCAB000AMW DNA see document see document False 2012-08-20 ENCODE 1, 2 ENCFF134QYH, ENCFF447POJ, ENCFF710NTS 5546849 ENCODE Processing Pipeline 527e75b296d4d1ed2edee4070e99694c https://www.encodeproject.org/files/ENCFF722BEI/@@download/ENCFF722BEI.bed.gz hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF913KLO bed narrowPeak peaks ENCSR000EFP ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF384-human ENCAB000AMW DNA see document see document False 2012-08-20 ENCODE 2 ENCFF134QYH, ENCFF710NTS 4952514 ENCODE Processing Pipeline b06fec22d524fcd17581a927c4a190ca https://www.encodeproject.org/files/ENCFF913KLO/@@download/ENCFF913KLO.bed.gz hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF766LSB bigBed narrowPeak peaks ENCSR000EFP ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF384-human ENCAB000AMW DNA see document see document False 2012-08-20 ENCODE 1, 2 ENCFF722BEI 12685782 ENCODE Processing Pipeline 96c25ed9cbe014ab53e7f9e0e89b49d4 https://www.encodeproject.org/files/ENCFF766LSB/@@download/ENCFF766LSB.bigBed hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF587KYY bigBed narrowPeak conservative idr thresholded peaks ENCSR000EFP ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF384-human ENCAB000AMW DNA see document see document False 2012-08-20 ENCODE 1, 2 ENCFF641YZX 634085 ENCODE Processing Pipeline 8904162ac7678fa914a75f623ae37cb1 https://www.encodeproject.org/files/ENCFF587KYY/@@download/ENCFF587KYY.bigBed hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF706SJZ bed narrowPeak optimal idr thresholded peaks ENCSR000EFP ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF384-human ENCAB000AMW DNA see document see document False 2012-08-20 ENCODE 1, 2 ENCFF001TDO, ENCFF319WWO, ENCFF722BEI, ENCFF913KLO 354973 ENCODE Processing Pipeline 8b78ea00785bf7a9dc6f64503042fe49 https://www.encodeproject.org/files/ENCFF706SJZ/@@download/ENCFF706SJZ.bed.gz hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF006EYW bigBed narrowPeak peaks ENCSR000EFP ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF384-human ENCAB000AMW DNA see document see document False 2012-08-20 ENCODE 2 ENCFF913KLO 10814484 ENCODE Processing Pipeline f1b99929ac078a748b1b9cfaced687d6 https://www.encodeproject.org/files/ENCFF006EYW/@@download/ENCFF006EYW.bigBed hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF596VRG bam unfiltered alignments ENCSR359NFW ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-USF2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 50 ENCFF141CZI, ENCFF807MUK 1009224982 ENCODE Processing Pipeline 030cd46a80deabb8dabaebee2761a09d https://www.encodeproject.org/files/ENCFF596VRG/@@download/ENCFF596VRG.bam hg19 released control low read depth, low read depth, missing genetic modification characterization ENCFF901PNK bam unfiltered alignments ENCSR359NFW ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-USF2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 50 ENCFF038QTK, ENCFF807MUK 693570765 ENCODE Processing Pipeline 69d5bbda8d7aeb6ac2563f92b9e98a91 https://www.encodeproject.org/files/ENCFF901PNK/@@download/ENCFF901PNK.bam hg19 released control low read depth, low read depth, missing genetic modification characterization ENCFF038QTK fastq reads ENCSR359NFW ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-USF2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 1 50 single-ended 654939056 Kevin White, UChicago 13953f47e563a2d7dd2ee4418c11992a SRA:SRR6213529 https://www.encodeproject.org/files/ENCFF038QTK/@@download/ENCFF038QTK.fastq.gz Illumina HiSeq 2000 /files/ENCFF532RGH/ released control low read depth, low read depth, missing genetic modification characterization ENCFF141CZI fastq reads ENCSR359NFW ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-USF2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 1 50 single-ended 993142835 Kevin White, UChicago 1a5a591864bd0ca61de2ef4178c68676 SRA:SRR6213530 https://www.encodeproject.org/files/ENCFF141CZI/@@download/ENCFF141CZI.fastq.gz Illumina HiSeq 2000 /files/ENCFF532RGH/ released control low read depth, low read depth, missing genetic modification characterization ENCFF523PEG bam alignments ENCSR359NFW ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-USF2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 50 ENCFF038QTK, ENCFF807MUK 509582793 ENCODE Processing Pipeline b7423c1e10fc5765ef65e93afac27ab4 https://www.encodeproject.org/files/ENCFF523PEG/@@download/ENCFF523PEG.bam hg19 released control low read depth, low read depth, missing genetic modification characterization ENCFF918WMQ bam alignments ENCSR359NFW ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-USF2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 50 ENCFF141CZI, ENCFF807MUK 704480023 ENCODE Processing Pipeline 538397c8d25cae1f36bffc6fa983904f https://www.encodeproject.org/files/ENCFF918WMQ/@@download/ENCFF918WMQ.bam hg19 released control low read depth, low read depth, missing genetic modification characterization ENCFF585WCX bigWig fold change over control ENCSR359NFW ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-USF2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF523PEG, ENCFF773XAD, ENCFF918WMQ 481017172 ENCODE Processing Pipeline 462f04d6338184ad4eb5062e1ba36def https://www.encodeproject.org/files/ENCFF585WCX/@@download/ENCFF585WCX.bigWig hg19 released control low read depth, low read depth, missing genetic modification characterization ENCFF083HUN bigWig signal p-value ENCSR359NFW ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-USF2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF773XAD, ENCFF918WMQ 311983511 ENCODE Processing Pipeline af18d8d275d1fd396624d8c52893981c https://www.encodeproject.org/files/ENCFF083HUN/@@download/ENCFF083HUN.bigWig hg19 released control low read depth, low read depth, missing genetic modification characterization ENCFF634FDR bigWig fold change over control ENCSR359NFW ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-USF2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF523PEG, ENCFF773XAD 248102343 ENCODE Processing Pipeline 9af9adb173d3110ab476cac115ea3c2e https://www.encodeproject.org/files/ENCFF634FDR/@@download/ENCFF634FDR.bigWig hg19 released control low read depth, low read depth, missing genetic modification characterization ENCFF058DFD bed narrowPeak peaks ENCSR359NFW ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-USF2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF523PEG, ENCFF773XAD, ENCFF918WMQ 6166034 ENCODE Processing Pipeline 76e0de8a5ea139b2ab650f2a5c6e81cb https://www.encodeproject.org/files/ENCFF058DFD/@@download/ENCFF058DFD.bed.gz hg19 released control low read depth, low read depth, missing genetic modification characterization ENCFF445GAE bigWig signal p-value ENCSR359NFW ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-USF2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF523PEG, ENCFF773XAD 344368029 ENCODE Processing Pipeline f0a6ff987447909137ecfc8401d398ca https://www.encodeproject.org/files/ENCFF445GAE/@@download/ENCFF445GAE.bigWig hg19 released control low read depth, low read depth, missing genetic modification characterization ENCFF766EAB bigWig signal p-value ENCSR359NFW ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-USF2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF523PEG, ENCFF773XAD, ENCFF918WMQ 317694964 ENCODE Processing Pipeline e81c1acf32a9583b9bc4f958dc4887d6 https://www.encodeproject.org/files/ENCFF766EAB/@@download/ENCFF766EAB.bigWig hg19 released control low read depth, low read depth, missing genetic modification characterization ENCFF427NNH bigWig fold change over control ENCSR359NFW ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-USF2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF773XAD, ENCFF918WMQ 313372025 ENCODE Processing Pipeline c2acecc40a5db0b262516aa36d4b2d90 https://www.encodeproject.org/files/ENCFF427NNH/@@download/ENCFF427NNH.bigWig hg19 released control low read depth, low read depth, missing genetic modification characterization ENCFF138XJT bed narrowPeak peaks ENCSR359NFW ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-USF2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF523PEG, ENCFF773XAD 5167428 ENCODE Processing Pipeline 1a4fc262ff8b6b7d1b7a7af59ee3373f https://www.encodeproject.org/files/ENCFF138XJT/@@download/ENCFF138XJT.bed.gz hg19 released control low read depth, low read depth, missing genetic modification characterization ENCFF969ETX bigBed narrowPeak peaks ENCSR359NFW ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-USF2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF058DFD 13183803 ENCODE Processing Pipeline 1835bc4b6b65d2aad8ea220cbecad672 https://www.encodeproject.org/files/ENCFF969ETX/@@download/ENCFF969ETX.bigBed hg19 released control low read depth, low read depth, missing genetic modification characterization ENCFF165PIM bed narrowPeak peaks ENCSR359NFW ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-USF2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF773XAD, ENCFF918WMQ 5438648 ENCODE Processing Pipeline 45571ed9fb10e650d229fc35923273d2 https://www.encodeproject.org/files/ENCFF165PIM/@@download/ENCFF165PIM.bed.gz hg19 released control low read depth, low read depth, missing genetic modification characterization ENCFF367TKT bigBed narrowPeak peaks ENCSR359NFW ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-USF2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF165PIM 12980001 ENCODE Processing Pipeline f7af12e30472542f522cc95ee6489731 https://www.encodeproject.org/files/ENCFF367TKT/@@download/ENCFF367TKT.bigBed hg19 released control low read depth, low read depth, missing genetic modification characterization ENCFF151PQY bigBed narrowPeak peaks ENCSR359NFW ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-USF2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF138XJT 12815059 ENCODE Processing Pipeline c2cbf6985751940485cffe948f5ee90d https://www.encodeproject.org/files/ENCFF151PQY/@@download/ENCFF151PQY.bigBed hg19 released control low read depth, low read depth, missing genetic modification characterization ENCFF888BVK bam unfiltered alignments ENCSR359NFW ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-USF2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 50 ENCFF038QTK, ENCFF643CGH 695742978 ENCODE Processing Pipeline 92fd62893dd0f94b84210f861d316bb5 https://www.encodeproject.org/files/ENCFF888BVK/@@download/ENCFF888BVK.bam GRCh38 released control low read depth, low read depth, missing genetic modification characterization ENCFF835WTF bam unfiltered alignments ENCSR359NFW ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-USF2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 50 ENCFF141CZI, ENCFF643CGH 1012254829 ENCODE Processing Pipeline 42e4f76d4710980adc9a3cdbb0853556 https://www.encodeproject.org/files/ENCFF835WTF/@@download/ENCFF835WTF.bam GRCh38 released control low read depth, low read depth, missing genetic modification characterization ENCFF979BFW bam alignments ENCSR359NFW ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-USF2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 50 ENCFF038QTK, ENCFF643CGH 509264505 ENCODE Processing Pipeline b9aead1ec3608cec4dfbf28ad19b4e37 https://www.encodeproject.org/files/ENCFF979BFW/@@download/ENCFF979BFW.bam GRCh38 released control low read depth, low read depth, missing genetic modification characterization ENCFF102ZOS bam alignments ENCSR359NFW ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-USF2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 50 ENCFF141CZI, ENCFF643CGH 704106450 ENCODE Processing Pipeline e13ac285bc4f21e620cc0e3dd76bd754 https://www.encodeproject.org/files/ENCFF102ZOS/@@download/ENCFF102ZOS.bam GRCh38 released control low read depth, low read depth, missing genetic modification characterization ENCFF310UTT bigWig signal p-value ENCSR359NFW ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-USF2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF102ZOS, ENCFF465FJI 337513132 ENCODE Processing Pipeline 24a53009e45d2b5422a94ec971cf98a4 https://www.encodeproject.org/files/ENCFF310UTT/@@download/ENCFF310UTT.bigWig GRCh38 released control low read depth, low read depth, missing genetic modification characterization ENCFF028VRH bigWig signal p-value ENCSR359NFW ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-USF2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF102ZOS, ENCFF465FJI, ENCFF979BFW 318786310 ENCODE Processing Pipeline 58b175ca1763112cbceb4be6a567fb2d https://www.encodeproject.org/files/ENCFF028VRH/@@download/ENCFF028VRH.bigWig GRCh38 released control low read depth, low read depth, missing genetic modification characterization ENCFF522ODV bigWig fold change over control ENCSR359NFW ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-USF2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF102ZOS, ENCFF465FJI 326282342 ENCODE Processing Pipeline 34df7a985f769388539af4206337baa9 https://www.encodeproject.org/files/ENCFF522ODV/@@download/ENCFF522ODV.bigWig GRCh38 released control low read depth, low read depth, missing genetic modification characterization ENCFF457UYN bigWig fold change over control ENCSR359NFW ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-USF2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF102ZOS, ENCFF465FJI, ENCFF979BFW 483769143 ENCODE Processing Pipeline 89058d126bf03c46a670c90ee1637e43 https://www.encodeproject.org/files/ENCFF457UYN/@@download/ENCFF457UYN.bigWig GRCh38 released control low read depth, low read depth, missing genetic modification characterization ENCFF669LQE bigWig signal p-value ENCSR359NFW ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-USF2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF465FJI, ENCFF979BFW 278514636 ENCODE Processing Pipeline 799abb434d33a51101c007169531307b https://www.encodeproject.org/files/ENCFF669LQE/@@download/ENCFF669LQE.bigWig GRCh38 released control low read depth, low read depth, missing genetic modification characterization ENCFF706PYW bigWig fold change over control ENCSR359NFW ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-USF2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF465FJI, ENCFF979BFW 249703631 ENCODE Processing Pipeline 85256afb6307444f1ee71e4909548a67 https://www.encodeproject.org/files/ENCFF706PYW/@@download/ENCFF706PYW.bigWig GRCh38 released control low read depth, low read depth, missing genetic modification characterization ENCFF576XRJ bed narrowPeak peaks ENCSR359NFW ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-USF2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF465FJI, ENCFF979BFW 5012873 ENCODE Processing Pipeline 26f03483bb43207ce5e0c83e6c75bc74 https://www.encodeproject.org/files/ENCFF576XRJ/@@download/ENCFF576XRJ.bed.gz GRCh38 released control low read depth, low read depth, missing genetic modification characterization ENCFF975ZSW bigBed narrowPeak peaks ENCSR359NFW ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-USF2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF460FNJ 12868275 ENCODE Processing Pipeline 55fd54949f524e625578a92d7face449 https://www.encodeproject.org/files/ENCFF975ZSW/@@download/ENCFF975ZSW.bigBed GRCh38 released control low read depth, low read depth, missing genetic modification characterization ENCFF509LOB bed narrowPeak peaks ENCSR359NFW ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-USF2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF102ZOS, ENCFF465FJI, ENCFF979BFW 5963583 ENCODE Processing Pipeline e19d9d7e5141004d4dabbe738bc7543e https://www.encodeproject.org/files/ENCFF509LOB/@@download/ENCFF509LOB.bed.gz GRCh38 released control low read depth, low read depth, missing genetic modification characterization ENCFF935UJJ bigBed narrowPeak peaks ENCSR359NFW ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-USF2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF509LOB 13149413 ENCODE Processing Pipeline 970649e297944bc2328487a8bbeb4988 https://www.encodeproject.org/files/ENCFF935UJJ/@@download/ENCFF935UJJ.bigBed GRCh38 released control low read depth, low read depth, missing genetic modification characterization ENCFF961KUU bigBed narrowPeak optimal idr thresholded peaks ENCSR359NFW ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-USF2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF208VCB 680286 ENCODE Processing Pipeline 8578fd1ec67dbaf727cf39bbdc66c044 https://www.encodeproject.org/files/ENCFF961KUU/@@download/ENCFF961KUU.bigBed GRCh38 released control low read depth, low read depth, missing genetic modification characterization ENCFF460FNJ bed narrowPeak peaks ENCSR359NFW ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-USF2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF102ZOS, ENCFF465FJI 5229612 ENCODE Processing Pipeline 3c48e1373f45127091e14e9a8e34d41f https://www.encodeproject.org/files/ENCFF460FNJ/@@download/ENCFF460FNJ.bed.gz GRCh38 released control low read depth, low read depth, missing genetic modification characterization ENCFF600FDD bigBed narrowPeak peaks ENCSR359NFW ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-USF2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF576XRJ 12679088 ENCODE Processing Pipeline 0f3a442c2f3f798cb7aca413a470b596 https://www.encodeproject.org/files/ENCFF600FDD/@@download/ENCFF600FDD.bigBed GRCh38 released control low read depth, low read depth, missing genetic modification characterization ENCFF208VCB bed narrowPeak optimal idr thresholded peaks ENCSR359NFW ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-USF2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF419RSJ, ENCFF460FNJ, ENCFF509LOB, ENCFF576XRJ 313712 ENCODE Processing Pipeline c2113a6ba83d8fda7f552be4c72912be https://www.encodeproject.org/files/ENCFF208VCB/@@download/ENCFF208VCB.bed.gz GRCh38 released control low read depth, low read depth, missing genetic modification characterization ENCFF287GHP bigBed narrowPeak conservative idr thresholded peaks ENCSR359NFW ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-USF2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF003GOA 486548 ENCODE Processing Pipeline 372cbbbd61930192117d3aaf8efd872c https://www.encodeproject.org/files/ENCFF287GHP/@@download/ENCFF287GHP.bigBed hg19 released control low read depth, low read depth, missing genetic modification characterization ENCFF422EKQ bigBed narrowPeak optimal idr thresholded peaks ENCSR359NFW ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-USF2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF417TXD 486711 ENCODE Processing Pipeline dd652facdb390a1c8491ce4aab6a6f2d https://www.encodeproject.org/files/ENCFF422EKQ/@@download/ENCFF422EKQ.bigBed hg19 released control low read depth, low read depth, missing genetic modification characterization ENCFF003GOA bed narrowPeak conservative idr thresholded peaks ENCSR359NFW ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-USF2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF001TDO, ENCFF058DFD, ENCFF138XJT, ENCFF165PIM 266886 ENCODE Processing Pipeline 603d579136fb94a8a916673206def8bc https://www.encodeproject.org/files/ENCFF003GOA/@@download/ENCFF003GOA.bed.gz hg19 released control low read depth, low read depth, missing genetic modification characterization ENCFF417TXD bed narrowPeak optimal idr thresholded peaks ENCSR359NFW ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-USF2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF001TDO, ENCFF058DFD, ENCFF138XJT, ENCFF165PIM 267307 ENCODE Processing Pipeline b55f438e6fa9a3b6ae13846dda2ca4b7 https://www.encodeproject.org/files/ENCFF417TXD/@@download/ENCFF417TXD.bed.gz hg19 released control low read depth, low read depth, missing genetic modification characterization ENCFF507REW fastq reads ENCSR065XVO ChIP-seq EFO:0002067 K562 cell line Homo sapiens CHAMP1-human ENCAB986MDC DNA False 2016-09-20 ENCODE 2 1 100 paired-ended 2 ENCFF740JJX 2918201430 Michael Snyder, Stanford dda906a04de81ba594a3309c9aeb5542 SRA:SRR5111038 https://www.encodeproject.org/files/ENCFF507REW/@@download/ENCFF507REW.fastq.gz Illumina HiSeq 4000 /files/ENCFF502GTS/ released mild to moderate bottlenecking ENCFF740JJX fastq reads ENCSR065XVO ChIP-seq EFO:0002067 K562 cell line Homo sapiens CHAMP1-human ENCAB986MDC DNA False 2016-09-20 ENCODE 2 1 100 paired-ended 1 ENCFF507REW 2656064962 Michael Snyder, Stanford 5038b813bf63efe764ac2d8520186b44 SRA:SRR5111038 https://www.encodeproject.org/files/ENCFF740JJX/@@download/ENCFF740JJX.fastq.gz Illumina HiSeq 4000 /files/ENCFF498JMO/ released mild to moderate bottlenecking ENCFF576YEJ fastq reads ENCSR065XVO ChIP-seq EFO:0002067 K562 cell line Homo sapiens CHAMP1-human ENCAB986MDC DNA False 2016-09-20 ENCODE 1 1 100 paired-ended 2 ENCFF088KVK 4249418964 Michael Snyder, Stanford f277a866800f5768fc8f5dced3ccf551 SRA:SRR5111037 https://www.encodeproject.org/files/ENCFF576YEJ/@@download/ENCFF576YEJ.fastq.gz Illumina HiSeq 4000 /files/ENCFF837MIV/ released mild to moderate bottlenecking ENCFF088KVK fastq reads ENCSR065XVO ChIP-seq EFO:0002067 K562 cell line Homo sapiens CHAMP1-human ENCAB986MDC DNA False 2016-09-20 ENCODE 1 1 100 paired-ended 1 ENCFF576YEJ 4001050219 Michael Snyder, Stanford b08ad475c195484bcca29ac8cd21465c SRA:SRR5111037 https://www.encodeproject.org/files/ENCFF088KVK/@@download/ENCFF088KVK.fastq.gz Illumina HiSeq 4000 /files/ENCFF259GQA/ released mild to moderate bottlenecking ENCFF769FYR bam unfiltered alignments ENCSR065XVO ChIP-seq EFO:0002067 K562 cell line Homo sapiens CHAMP1-human ENCAB986MDC DNA False 2016-09-20 ENCODE 2 100 ENCFF507REW, ENCFF643CGH, ENCFF740JJX 5374018802 ENCODE Processing Pipeline fbcea1375197560b4ed98f5caffe845d https://www.encodeproject.org/files/ENCFF769FYR/@@download/ENCFF769FYR.bam GRCh38 released mild to moderate bottlenecking ENCFF055PMZ bam unfiltered alignments ENCSR065XVO ChIP-seq EFO:0002067 K562 cell line Homo sapiens CHAMP1-human ENCAB986MDC DNA False 2016-09-20 ENCODE 2 100 ENCFF507REW, ENCFF740JJX, ENCFF807MUK 5368239134 ENCODE Processing Pipeline 47f952d2d46d34dec4083c6adbcdcdee https://www.encodeproject.org/files/ENCFF055PMZ/@@download/ENCFF055PMZ.bam hg19 released mild to moderate bottlenecking ENCFF653KCU bam unfiltered alignments ENCSR065XVO ChIP-seq EFO:0002067 K562 cell line Homo sapiens CHAMP1-human ENCAB986MDC DNA False 2016-09-20 ENCODE 1 100 ENCFF088KVK, ENCFF576YEJ, ENCFF643CGH 7623287335 ENCODE Processing Pipeline 56d909ed82bb97d8d0c48aedf55d4048 https://www.encodeproject.org/files/ENCFF653KCU/@@download/ENCFF653KCU.bam GRCh38 released mild to moderate bottlenecking ENCFF474DCF bam unfiltered alignments ENCSR065XVO ChIP-seq EFO:0002067 K562 cell line Homo sapiens CHAMP1-human ENCAB986MDC DNA False 2016-09-20 ENCODE 1 100 ENCFF088KVK, ENCFF576YEJ, ENCFF807MUK 7616005957 ENCODE Processing Pipeline f043cd2a29f7d8b3a25ec2a35c389a17 https://www.encodeproject.org/files/ENCFF474DCF/@@download/ENCFF474DCF.bam hg19 released mild to moderate bottlenecking ENCFF432NAV bam alignments ENCSR065XVO ChIP-seq EFO:0002067 K562 cell line Homo sapiens CHAMP1-human ENCAB986MDC DNA False 2016-09-20 ENCODE 2 100 ENCFF507REW, ENCFF643CGH, ENCFF740JJX 4114281266 ENCODE Processing Pipeline 121323bf20f907d85256b964b267edeb https://www.encodeproject.org/files/ENCFF432NAV/@@download/ENCFF432NAV.bam GRCh38 released mild to moderate bottlenecking ENCFF991XPF bam alignments ENCSR065XVO ChIP-seq EFO:0002067 K562 cell line Homo sapiens CHAMP1-human ENCAB986MDC DNA False 2016-09-20 ENCODE 2 100 ENCFF507REW, ENCFF740JJX, ENCFF807MUK 4110916727 ENCODE Processing Pipeline e1822970535e61b2403a059b37bf29d1 https://www.encodeproject.org/files/ENCFF991XPF/@@download/ENCFF991XPF.bam hg19 released mild to moderate bottlenecking ENCFF824HGA bam alignments ENCSR065XVO ChIP-seq EFO:0002067 K562 cell line Homo sapiens CHAMP1-human ENCAB986MDC DNA False 2016-09-20 ENCODE 1 100 ENCFF088KVK, ENCFF576YEJ, ENCFF643CGH 5369833028 ENCODE Processing Pipeline 35828711a0515cabf886ffaa73337d40 https://www.encodeproject.org/files/ENCFF824HGA/@@download/ENCFF824HGA.bam GRCh38 released mild to moderate bottlenecking ENCFF170DKK bam alignments ENCSR065XVO ChIP-seq EFO:0002067 K562 cell line Homo sapiens CHAMP1-human ENCAB986MDC DNA False 2016-09-20 ENCODE 1 100 ENCFF088KVK, ENCFF576YEJ, ENCFF807MUK 5363887310 ENCODE Processing Pipeline d29facd817ea3c935ad4afb0deda34ee https://www.encodeproject.org/files/ENCFF170DKK/@@download/ENCFF170DKK.bam hg19 released mild to moderate bottlenecking ENCFF405AHX bigWig signal p-value ENCSR065XVO ChIP-seq EFO:0002067 K562 cell line Homo sapiens CHAMP1-human ENCAB986MDC DNA False 2016-09-20 ENCODE 2 ENCFF160VXC, ENCFF991XPF 1151058378 ENCODE Processing Pipeline 5d7d71a8cdcd28cc67efbe02e7c16fb6 https://www.encodeproject.org/files/ENCFF405AHX/@@download/ENCFF405AHX.bigWig hg19 released mild to moderate bottlenecking ENCFF079GQA bigWig signal p-value ENCSR065XVO ChIP-seq EFO:0002067 K562 cell line Homo sapiens CHAMP1-human ENCAB986MDC DNA False 2016-09-20 ENCODE 1 ENCFF160VXC, ENCFF170DKK, ENCFF834TUP 1805212214 ENCODE Processing Pipeline 2c1c34b0a8da461ae641297ac1276e35 https://www.encodeproject.org/files/ENCFF079GQA/@@download/ENCFF079GQA.bigWig hg19 released mild to moderate bottlenecking ENCFF980RSQ bigWig signal p-value ENCSR065XVO ChIP-seq EFO:0002067 K562 cell line Homo sapiens CHAMP1-human ENCAB986MDC DNA False 2016-09-20 ENCODE 1, 2 ENCFF160VXC, ENCFF170DKK, ENCFF834TUP, ENCFF991XPF 2285771321 ENCODE Processing Pipeline eab889c39476daaca50aa4e1c536cb11 https://www.encodeproject.org/files/ENCFF980RSQ/@@download/ENCFF980RSQ.bigWig hg19 released mild to moderate bottlenecking ENCFF998THE bigWig fold change over control ENCSR065XVO ChIP-seq EFO:0002067 K562 cell line Homo sapiens CHAMP1-human ENCAB986MDC DNA False 2016-09-20 ENCODE 1 ENCFF160VXC, ENCFF170DKK, ENCFF834TUP 1990922654 ENCODE Processing Pipeline 4e598c784eeb87f8f6df7ca53229f5e2 https://www.encodeproject.org/files/ENCFF998THE/@@download/ENCFF998THE.bigWig hg19 released mild to moderate bottlenecking ENCFF665NOV bigWig fold change over control ENCSR065XVO ChIP-seq EFO:0002067 K562 cell line Homo sapiens CHAMP1-human ENCAB986MDC DNA False 2016-09-20 ENCODE 2 ENCFF160VXC, ENCFF991XPF 1357061586 ENCODE Processing Pipeline bb8b23512193e913026527a0aaa9cd59 https://www.encodeproject.org/files/ENCFF665NOV/@@download/ENCFF665NOV.bigWig hg19 released mild to moderate bottlenecking ENCFF087XWL bigWig fold change over control ENCSR065XVO ChIP-seq EFO:0002067 K562 cell line Homo sapiens CHAMP1-human ENCAB986MDC DNA False 2016-09-20 ENCODE 1, 2 ENCFF160VXC, ENCFF170DKK, ENCFF834TUP, ENCFF991XPF 2449085590 ENCODE Processing Pipeline e52b5aadffc579e0370600f6a88ae08f https://www.encodeproject.org/files/ENCFF087XWL/@@download/ENCFF087XWL.bigWig hg19 released mild to moderate bottlenecking ENCFF216MFC bed narrowPeak peaks ENCSR065XVO ChIP-seq EFO:0002067 K562 cell line Homo sapiens CHAMP1-human ENCAB986MDC DNA False 2016-09-20 ENCODE 1 ENCFF160VXC, ENCFF170DKK, ENCFF834TUP 7126296 ENCODE Processing Pipeline ba5c63ea5c27ef70e0538c87ad9ca064 https://www.encodeproject.org/files/ENCFF216MFC/@@download/ENCFF216MFC.bed.gz hg19 released mild to moderate bottlenecking ENCFF069GYB bed narrowPeak peaks ENCSR065XVO ChIP-seq EFO:0002067 K562 cell line Homo sapiens CHAMP1-human ENCAB986MDC DNA False 2016-09-20 ENCODE 1, 2 ENCFF160VXC, ENCFF170DKK, ENCFF834TUP, ENCFF991XPF 7283592 ENCODE Processing Pipeline 97b6ccb994b891eb94263b3ec1c98b26 https://www.encodeproject.org/files/ENCFF069GYB/@@download/ENCFF069GYB.bed.gz hg19 released mild to moderate bottlenecking ENCFF869KQW bed narrowPeak peaks ENCSR065XVO ChIP-seq EFO:0002067 K562 cell line Homo sapiens CHAMP1-human ENCAB986MDC DNA False 2016-09-20 ENCODE 2 ENCFF160VXC, ENCFF991XPF 6932464 ENCODE Processing Pipeline 3273e779c299bdeae6219e06b81c38f9 https://www.encodeproject.org/files/ENCFF869KQW/@@download/ENCFF869KQW.bed.gz hg19 released mild to moderate bottlenecking ENCFF273SYC bigBed narrowPeak peaks ENCSR065XVO ChIP-seq EFO:0002067 K562 cell line Homo sapiens CHAMP1-human ENCAB986MDC DNA False 2016-09-20 ENCODE 1 ENCFF216MFC 13209501 ENCODE Processing Pipeline 435559a3d74bf6153dc14501862c39d5 https://www.encodeproject.org/files/ENCFF273SYC/@@download/ENCFF273SYC.bigBed hg19 released mild to moderate bottlenecking ENCFF241QUJ bigBed narrowPeak peaks ENCSR065XVO ChIP-seq EFO:0002067 K562 cell line Homo sapiens CHAMP1-human ENCAB986MDC DNA False 2016-09-20 ENCODE 1, 2 ENCFF069GYB 13016490 ENCODE Processing Pipeline b67921d8018b609fbfc6da4ece7a23a6 https://www.encodeproject.org/files/ENCFF241QUJ/@@download/ENCFF241QUJ.bigBed hg19 released mild to moderate bottlenecking ENCFF295WNA bigBed narrowPeak peaks ENCSR065XVO ChIP-seq EFO:0002067 K562 cell line Homo sapiens CHAMP1-human ENCAB986MDC DNA False 2016-09-20 ENCODE 2 ENCFF869KQW 13084839 ENCODE Processing Pipeline bc59fc5c247a82e9ababe697f18db18e https://www.encodeproject.org/files/ENCFF295WNA/@@download/ENCFF295WNA.bigBed hg19 released mild to moderate bottlenecking ENCFF201PDX bed narrowPeak conservative idr thresholded peaks ENCSR065XVO ChIP-seq EFO:0002067 K562 cell line Homo sapiens CHAMP1-human ENCAB986MDC DNA False 2016-09-20 ENCODE 1, 2 ENCFF001TDO, ENCFF069GYB, ENCFF216MFC, ENCFF869KQW 197690 ENCODE Processing Pipeline 41807fca2427bef06cc8ad3d2d7dab4a https://www.encodeproject.org/files/ENCFF201PDX/@@download/ENCFF201PDX.bed.gz hg19 released mild to moderate bottlenecking ENCFF508JUG bigBed narrowPeak conservative idr thresholded peaks ENCSR065XVO ChIP-seq EFO:0002067 K562 cell line Homo sapiens CHAMP1-human ENCAB986MDC DNA False 2016-09-20 ENCODE 1, 2 ENCFF201PDX 445719 ENCODE Processing Pipeline 0336dae9ce46571a2f6521e3d0c39b2d https://www.encodeproject.org/files/ENCFF508JUG/@@download/ENCFF508JUG.bigBed hg19 released mild to moderate bottlenecking ENCFF859FVX bed narrowPeak optimal idr thresholded peaks ENCSR065XVO ChIP-seq EFO:0002067 K562 cell line Homo sapiens CHAMP1-human ENCAB986MDC DNA False 2016-09-20 ENCODE 1, 2 ENCFF001TDO, ENCFF069GYB, ENCFF216MFC, ENCFF869KQW 270063 ENCODE Processing Pipeline 49b2fe762e83e323d77be75057dea680 https://www.encodeproject.org/files/ENCFF859FVX/@@download/ENCFF859FVX.bed.gz hg19 released mild to moderate bottlenecking ENCFF880SQP bigBed narrowPeak optimal idr thresholded peaks ENCSR065XVO ChIP-seq EFO:0002067 K562 cell line Homo sapiens CHAMP1-human ENCAB986MDC DNA False 2016-09-20 ENCODE 1, 2 ENCFF859FVX 565766 ENCODE Processing Pipeline 4e6a400ceea0d2b4f358b544ed8061d4 https://www.encodeproject.org/files/ENCFF880SQP/@@download/ENCFF880SQP.bigBed hg19 released mild to moderate bottlenecking ENCFF268XIT bigWig signal p-value ENCSR065XVO ChIP-seq EFO:0002067 K562 cell line Homo sapiens CHAMP1-human ENCAB986MDC DNA False 2016-09-20 ENCODE 1 ENCFF712WXB, ENCFF790TAN, ENCFF824HGA 1821146322 ENCODE Processing Pipeline 643be3314caaa2918fbe79ebc0f2c058 https://www.encodeproject.org/files/ENCFF268XIT/@@download/ENCFF268XIT.bigWig GRCh38 released mild to moderate bottlenecking ENCFF754LZW bigWig signal p-value ENCSR065XVO ChIP-seq EFO:0002067 K562 cell line Homo sapiens CHAMP1-human ENCAB986MDC DNA False 2016-09-20 ENCODE 2 ENCFF432NAV, ENCFF790TAN 1149828891 ENCODE Processing Pipeline 0b77f69d77a252b756cea1d07a013181 https://www.encodeproject.org/files/ENCFF754LZW/@@download/ENCFF754LZW.bigWig GRCh38 released mild to moderate bottlenecking ENCFF150OVG bigWig signal p-value ENCSR065XVO ChIP-seq EFO:0002067 K562 cell line Homo sapiens CHAMP1-human ENCAB986MDC DNA False 2016-09-20 ENCODE 1, 2 ENCFF432NAV, ENCFF712WXB, ENCFF790TAN, ENCFF824HGA 2168379269 ENCODE Processing Pipeline 1a6f28ca10928e306de3843ce85e7161 https://www.encodeproject.org/files/ENCFF150OVG/@@download/ENCFF150OVG.bigWig GRCh38 released mild to moderate bottlenecking ENCFF809NWL bigWig fold change over control ENCSR065XVO ChIP-seq EFO:0002067 K562 cell line Homo sapiens CHAMP1-human ENCAB986MDC DNA False 2016-09-20 ENCODE 1 ENCFF712WXB, ENCFF790TAN, ENCFF824HGA 1992916429 ENCODE Processing Pipeline 8f45f5ab888564720398412848eae82c https://www.encodeproject.org/files/ENCFF809NWL/@@download/ENCFF809NWL.bigWig GRCh38 released mild to moderate bottlenecking ENCFF189DSB bigWig fold change over control ENCSR065XVO ChIP-seq EFO:0002067 K562 cell line Homo sapiens CHAMP1-human ENCAB986MDC DNA False 2016-09-20 ENCODE 2 ENCFF432NAV, ENCFF790TAN 1354749664 ENCODE Processing Pipeline 5ae6d31f816b3149af49a66c22ee49d8 https://www.encodeproject.org/files/ENCFF189DSB/@@download/ENCFF189DSB.bigWig GRCh38 released mild to moderate bottlenecking ENCFF653DDA bigWig fold change over control ENCSR065XVO ChIP-seq EFO:0002067 K562 cell line Homo sapiens CHAMP1-human ENCAB986MDC DNA False 2016-09-20 ENCODE 1, 2 ENCFF432NAV, ENCFF712WXB, ENCFF790TAN, ENCFF824HGA 2481992979 ENCODE Processing Pipeline 90598ad7fc8e7868da42c8cb444ed869 https://www.encodeproject.org/files/ENCFF653DDA/@@download/ENCFF653DDA.bigWig GRCh38 released mild to moderate bottlenecking ENCFF306PQS bed narrowPeak peaks ENCSR065XVO ChIP-seq EFO:0002067 K562 cell line Homo sapiens CHAMP1-human ENCAB986MDC DNA False 2016-09-20 ENCODE 1, 2 ENCFF432NAV, ENCFF712WXB, ENCFF790TAN, ENCFF824HGA 7284955 ENCODE Processing Pipeline 84602e359e6d8d9af6ac13aaccb28634 https://www.encodeproject.org/files/ENCFF306PQS/@@download/ENCFF306PQS.bed.gz GRCh38 released mild to moderate bottlenecking ENCFF356NXU bed narrowPeak peaks ENCSR065XVO ChIP-seq EFO:0002067 K562 cell line Homo sapiens CHAMP1-human ENCAB986MDC DNA False 2016-09-20 ENCODE 2 ENCFF432NAV, ENCFF790TAN 6852566 ENCODE Processing Pipeline b53a79ed2a69b2a47c2c8c6eeb3c4ee8 https://www.encodeproject.org/files/ENCFF356NXU/@@download/ENCFF356NXU.bed.gz GRCh38 released mild to moderate bottlenecking ENCFF503VRU bed narrowPeak peaks ENCSR065XVO ChIP-seq EFO:0002067 K562 cell line Homo sapiens CHAMP1-human ENCAB986MDC DNA False 2016-09-20 ENCODE 1 ENCFF712WXB, ENCFF790TAN, ENCFF824HGA 7084361 ENCODE Processing Pipeline b7b13d8a2decce1200c7cb5a28b6c1ce https://www.encodeproject.org/files/ENCFF503VRU/@@download/ENCFF503VRU.bed.gz GRCh38 released mild to moderate bottlenecking ENCFF610SGG bigBed narrowPeak peaks ENCSR065XVO ChIP-seq EFO:0002067 K562 cell line Homo sapiens CHAMP1-human ENCAB986MDC DNA False 2016-09-20 ENCODE 2 ENCFF356NXU 13096253 ENCODE Processing Pipeline a99eb9efb2725c34ca9729f53e5234cb https://www.encodeproject.org/files/ENCFF610SGG/@@download/ENCFF610SGG.bigBed GRCh38 released mild to moderate bottlenecking ENCFF694SHT bigBed narrowPeak peaks ENCSR065XVO ChIP-seq EFO:0002067 K562 cell line Homo sapiens CHAMP1-human ENCAB986MDC DNA False 2016-09-20 ENCODE 1 ENCFF503VRU 13221840 ENCODE Processing Pipeline cd1e284c67c1a7d89b377cde5817ee20 https://www.encodeproject.org/files/ENCFF694SHT/@@download/ENCFF694SHT.bigBed GRCh38 released mild to moderate bottlenecking ENCFF987LZR bigBed narrowPeak conservative idr thresholded peaks ENCSR065XVO ChIP-seq EFO:0002067 K562 cell line Homo sapiens CHAMP1-human ENCAB986MDC DNA False 2016-09-20 ENCODE 1, 2 ENCFF077WVW 447468 ENCODE Processing Pipeline 918b1e959728a39251d38fcbbe1f4a02 https://www.encodeproject.org/files/ENCFF987LZR/@@download/ENCFF987LZR.bigBed GRCh38 released mild to moderate bottlenecking ENCFF343CLB bigBed narrowPeak optimal idr thresholded peaks ENCSR065XVO ChIP-seq EFO:0002067 K562 cell line Homo sapiens CHAMP1-human ENCAB986MDC DNA False 2016-09-20 ENCODE 1, 2 ENCFF646MEF 578541 ENCODE Processing Pipeline 7dceb9f6d1b86fe07ae804f37ad689bb https://www.encodeproject.org/files/ENCFF343CLB/@@download/ENCFF343CLB.bigBed GRCh38 released mild to moderate bottlenecking ENCFF752GJR bigBed narrowPeak peaks ENCSR065XVO ChIP-seq EFO:0002067 K562 cell line Homo sapiens CHAMP1-human ENCAB986MDC DNA False 2016-09-20 ENCODE 1, 2 ENCFF306PQS 13029828 ENCODE Processing Pipeline b6c64d2a14198d8106d8f26717070f65 https://www.encodeproject.org/files/ENCFF752GJR/@@download/ENCFF752GJR.bigBed GRCh38 released mild to moderate bottlenecking ENCFF077WVW bed narrowPeak conservative idr thresholded peaks ENCSR065XVO ChIP-seq EFO:0002067 K562 cell line Homo sapiens CHAMP1-human ENCAB986MDC DNA False 2016-09-20 ENCODE 1, 2 ENCFF306PQS, ENCFF356NXU, ENCFF419RSJ, ENCFF503VRU 198767 ENCODE Processing Pipeline 96297eddddcd093d759d57804f8de5b0 https://www.encodeproject.org/files/ENCFF077WVW/@@download/ENCFF077WVW.bed.gz GRCh38 released mild to moderate bottlenecking ENCFF646MEF bed narrowPeak optimal idr thresholded peaks ENCSR065XVO ChIP-seq EFO:0002067 K562 cell line Homo sapiens CHAMP1-human ENCAB986MDC DNA False 2016-09-20 ENCODE 1, 2 ENCFF306PQS, ENCFF356NXU, ENCFF419RSJ, ENCFF503VRU 278256 ENCODE Processing Pipeline fa755334fe03f026bea8a7d699fe31ca https://www.encodeproject.org/files/ENCFF646MEF/@@download/ENCFF646MEF.bed.gz GRCh38 released mild to moderate bottlenecking ENCFF002DPG fastq reads ENCSR914NEI ChIP-seq EFO:0002067 K562 cell line Homo sapiens MTA3-human ENCAB000BML DNA formaldehyde False 2017-06-07 ENCODE 2 1 100 paired-ended 2 ENCFF002EFW 3407184602 Michael Snyder, Stanford 1aca41c2d9883e6e653a43aa9783d051 SRA:SRR6213980 https://www.encodeproject.org/files/ENCFF002DPG/@@download/ENCFF002DPG.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFA/ released mild to moderate bottlenecking ENCFF067NIX bam alignments ENCSR914NEI ChIP-seq EFO:0002067 K562 cell line Homo sapiens MTA3-human ENCAB000BML DNA formaldehyde False 2017-06-07 ENCODE 2 ENCFF002DPG, ENCFF002EFW, ENCFF807MUK 5417281731 ENCODE Processing Pipeline 3d7eda0874607c086e4b7aabdc5dcf27 https://www.encodeproject.org/files/ENCFF067NIX/@@download/ENCFF067NIX.bam hg19 released mild to moderate bottlenecking ENCFF002EFW fastq reads ENCSR914NEI ChIP-seq EFO:0002067 K562 cell line Homo sapiens MTA3-human ENCAB000BML DNA formaldehyde False 2017-06-07 ENCODE 2 1 100 paired-ended 1 ENCFF002DPG 3213581911 Michael Snyder, Stanford 14b5c4795310853881d2f032f8493229 SRA:SRR6213980 https://www.encodeproject.org/files/ENCFF002EFW/@@download/ENCFF002EFW.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFD/ released mild to moderate bottlenecking ENCFF894NUI fastq reads ENCSR914NEI ChIP-seq EFO:0002067 K562 cell line Homo sapiens MTA3-human ENCAB000BML DNA formaldehyde False 2017-06-07 ENCODE 3 1 101 paired-ended 1 ENCFF809IJU 3266619404 Michael Snyder, Stanford 43c31e6395d3ba49d6e0f39ebb7f7dca SRA:SRR6213981 https://www.encodeproject.org/files/ENCFF894NUI/@@download/ENCFF894NUI.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFF/ released mild to moderate bottlenecking ENCFF809IJU fastq reads ENCSR914NEI ChIP-seq EFO:0002067 K562 cell line Homo sapiens MTA3-human ENCAB000BML DNA formaldehyde False 2017-06-07 ENCODE 3 1 101 paired-ended 2 ENCFF894NUI 3246972526 Michael Snyder, Stanford 2bfdc20574ca6245aed61aa4a29b825b SRA:SRR6213981 https://www.encodeproject.org/files/ENCFF809IJU/@@download/ENCFF809IJU.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFH/ released mild to moderate bottlenecking ENCFF408PVR bam unfiltered alignments ENCSR914NEI ChIP-seq EFO:0002067 K562 cell line Homo sapiens MTA3-human ENCAB000BML DNA formaldehyde False 2017-06-07 ENCODE 3 101 ENCFF643CGH, ENCFF809IJU, ENCFF894NUI 6338717769 ENCODE Processing Pipeline 00e3e40d38bacc848faa501711625229 https://www.encodeproject.org/files/ENCFF408PVR/@@download/ENCFF408PVR.bam GRCh38 released mild to moderate bottlenecking ENCFF560QOE bam alignments ENCSR914NEI ChIP-seq EFO:0002067 K562 cell line Homo sapiens MTA3-human ENCAB000BML DNA formaldehyde False 2017-06-07 ENCODE 2 100 ENCFF002DPG, ENCFF002EFW, ENCFF643CGH 5419818536 ENCODE Processing Pipeline 9d2a854513d07c5e8b6b29ddb3ee1b46 https://www.encodeproject.org/files/ENCFF560QOE/@@download/ENCFF560QOE.bam GRCh38 released mild to moderate bottlenecking ENCFF061FRE bam unfiltered alignments ENCSR914NEI ChIP-seq EFO:0002067 K562 cell line Homo sapiens MTA3-human ENCAB000BML DNA formaldehyde False 2017-06-07 ENCODE 2 100 ENCFF002DPG, ENCFF002EFW, ENCFF643CGH 6964213714 ENCODE Processing Pipeline 48e23849f6b39e70cbd3bf9497db2e69 https://www.encodeproject.org/files/ENCFF061FRE/@@download/ENCFF061FRE.bam GRCh38 released mild to moderate bottlenecking ENCFF508SQK bam alignments ENCSR914NEI ChIP-seq EFO:0002067 K562 cell line Homo sapiens MTA3-human ENCAB000BML DNA formaldehyde False 2017-06-07 ENCODE 3 101 ENCFF643CGH, ENCFF809IJU, ENCFF894NUI 5553607561 ENCODE Processing Pipeline 8e845094bc6120b06bb64086293a023b https://www.encodeproject.org/files/ENCFF508SQK/@@download/ENCFF508SQK.bam GRCh38 released mild to moderate bottlenecking ENCFF366BLM bam unfiltered alignments ENCSR914NEI ChIP-seq EFO:0002067 K562 cell line Homo sapiens MTA3-human ENCAB000BML DNA formaldehyde False 2017-06-07 ENCODE 3 101 ENCFF807MUK, ENCFF809IJU, ENCFF894NUI 6331725144 ENCODE Processing Pipeline 5250f505d96ada86efdc7eced6399753 https://www.encodeproject.org/files/ENCFF366BLM/@@download/ENCFF366BLM.bam hg19 released mild to moderate bottlenecking ENCFF642HGZ bam alignments ENCSR914NEI ChIP-seq EFO:0002067 K562 cell line Homo sapiens MTA3-human ENCAB000BML DNA formaldehyde False 2017-06-07 ENCODE 3 101 ENCFF807MUK, ENCFF809IJU, ENCFF894NUI 5551099504 ENCODE Processing Pipeline 6cd78fc49e0e979a38db8f285a602247 https://www.encodeproject.org/files/ENCFF642HGZ/@@download/ENCFF642HGZ.bam hg19 released mild to moderate bottlenecking ENCFF730EIE bigWig signal p-value ENCSR914NEI ChIP-seq EFO:0002067 K562 cell line Homo sapiens MTA3-human ENCAB000BML DNA formaldehyde False 2017-06-07 ENCODE 2, 3 ENCFF227IZS, ENCFF508SQK, ENCFF560QOE, ENCFF910IKB 2104992837 ENCODE Processing Pipeline 28e5f049adf77fcca3d141f36ec69a29 https://www.encodeproject.org/files/ENCFF730EIE/@@download/ENCFF730EIE.bigWig GRCh38 released mild to moderate bottlenecking ENCFF580BLR bigWig fold change over control ENCSR914NEI ChIP-seq EFO:0002067 K562 cell line Homo sapiens MTA3-human ENCAB000BML DNA formaldehyde False 2017-06-07 ENCODE 3 ENCFF508SQK, ENCFF910IKB 1375759780 ENCODE Processing Pipeline 8711ea560066bf5e3674b3ef63ad6e95 https://www.encodeproject.org/files/ENCFF580BLR/@@download/ENCFF580BLR.bigWig GRCh38 released mild to moderate bottlenecking ENCFF781GEB bed narrowPeak peaks ENCSR914NEI ChIP-seq EFO:0002067 K562 cell line Homo sapiens MTA3-human ENCAB000BML DNA formaldehyde False 2017-06-07 ENCODE 2, 3 ENCFF227IZS, ENCFF508SQK, ENCFF560QOE, ENCFF910IKB 7277749 ENCODE Processing Pipeline 9faf5c2dba06158342b4278665b580bd https://www.encodeproject.org/files/ENCFF781GEB/@@download/ENCFF781GEB.bed.gz GRCh38 released mild to moderate bottlenecking ENCFF435LOX bigBed narrowPeak optimal idr thresholded peaks ENCSR914NEI ChIP-seq EFO:0002067 K562 cell line Homo sapiens MTA3-human ENCAB000BML DNA formaldehyde False 2017-06-07 ENCODE 2, 3 ENCFF459XLR 1168402 ENCODE Processing Pipeline 6d90dcf9108168be932c1c24d440c1e3 https://www.encodeproject.org/files/ENCFF435LOX/@@download/ENCFF435LOX.bigBed GRCh38 released mild to moderate bottlenecking ENCFF434RKN bed narrowPeak peaks ENCSR914NEI ChIP-seq EFO:0002067 K562 cell line Homo sapiens MTA3-human ENCAB000BML DNA formaldehyde False 2017-06-07 ENCODE 3 ENCFF508SQK, ENCFF910IKB 6934143 ENCODE Processing Pipeline 8c3e70a351cdc1593fb66d999d6931d5 https://www.encodeproject.org/files/ENCFF434RKN/@@download/ENCFF434RKN.bed.gz GRCh38 released mild to moderate bottlenecking ENCFF609XFL bigBed narrowPeak conservative idr thresholded peaks ENCSR914NEI ChIP-seq EFO:0002067 K562 cell line Homo sapiens MTA3-human ENCAB000BML DNA formaldehyde False 2017-06-07 ENCODE 2, 3 ENCFF678KKB 900867 ENCODE Processing Pipeline 3c6dcbaf94b01197b6f33f4c66c109c3 https://www.encodeproject.org/files/ENCFF609XFL/@@download/ENCFF609XFL.bigBed GRCh38 released mild to moderate bottlenecking ENCFF811NAA bigWig fold change over control ENCSR914NEI ChIP-seq EFO:0002067 K562 cell line Homo sapiens MTA3-human ENCAB000BML DNA formaldehyde False 2017-06-07 ENCODE 2 ENCFF227IZS, ENCFF560QOE 1323071793 ENCODE Processing Pipeline 1481d7de5f8f0fbb76e12d770e63f0e5 https://www.encodeproject.org/files/ENCFF811NAA/@@download/ENCFF811NAA.bigWig GRCh38 released mild to moderate bottlenecking ENCFF648XXD bigWig fold change over control ENCSR914NEI ChIP-seq EFO:0002067 K562 cell line Homo sapiens MTA3-human ENCAB000BML DNA formaldehyde False 2017-06-07 ENCODE 2, 3 ENCFF227IZS, ENCFF508SQK, ENCFF560QOE, ENCFF910IKB 2325737157 ENCODE Processing Pipeline fcf3d4defa018cb5b1a4c15ac5b9ae10 https://www.encodeproject.org/files/ENCFF648XXD/@@download/ENCFF648XXD.bigWig GRCh38 released mild to moderate bottlenecking ENCFF306EOV bigBed narrowPeak peaks ENCSR914NEI ChIP-seq EFO:0002067 K562 cell line Homo sapiens MTA3-human ENCAB000BML DNA formaldehyde False 2017-06-07 ENCODE 2 ENCFF230BXX 12895226 ENCODE Processing Pipeline b41945320f5180a6afe23b649acee9d7 https://www.encodeproject.org/files/ENCFF306EOV/@@download/ENCFF306EOV.bigBed GRCh38 released mild to moderate bottlenecking ENCFF349SOC bigBed narrowPeak peaks ENCSR914NEI ChIP-seq EFO:0002067 K562 cell line Homo sapiens MTA3-human ENCAB000BML DNA formaldehyde False 2017-06-07 ENCODE 2, 3 ENCFF781GEB 12788644 ENCODE Processing Pipeline 154bd5b3be1f3473ac4df02b66a9de0d https://www.encodeproject.org/files/ENCFF349SOC/@@download/ENCFF349SOC.bigBed GRCh38 released mild to moderate bottlenecking ENCFF678KKB bed narrowPeak conservative idr thresholded peaks ENCSR914NEI ChIP-seq EFO:0002067 K562 cell line Homo sapiens MTA3-human ENCAB000BML DNA formaldehyde False 2017-06-07 ENCODE 2, 3 ENCFF230BXX, ENCFF419RSJ, ENCFF434RKN, ENCFF781GEB 380796 ENCODE Processing Pipeline 8bc63c632252148fc0b7a18dc70f0d35 https://www.encodeproject.org/files/ENCFF678KKB/@@download/ENCFF678KKB.bed.gz GRCh38 released mild to moderate bottlenecking ENCFF459XLR bed narrowPeak optimal idr thresholded peaks ENCSR914NEI ChIP-seq EFO:0002067 K562 cell line Homo sapiens MTA3-human ENCAB000BML DNA formaldehyde False 2017-06-07 ENCODE 2, 3 ENCFF230BXX, ENCFF419RSJ, ENCFF434RKN, ENCFF781GEB 521870 ENCODE Processing Pipeline d70be6acc32e1783ddb880b4a74e4bfe https://www.encodeproject.org/files/ENCFF459XLR/@@download/ENCFF459XLR.bed.gz GRCh38 released mild to moderate bottlenecking ENCFF751GOP bigWig signal p-value ENCSR914NEI ChIP-seq EFO:0002067 K562 cell line Homo sapiens MTA3-human ENCAB000BML DNA formaldehyde False 2017-06-07 ENCODE 2 ENCFF227IZS, ENCFF560QOE 1325905182 ENCODE Processing Pipeline c64871052ba0ffc31a3ce6ebf0c02cbe https://www.encodeproject.org/files/ENCFF751GOP/@@download/ENCFF751GOP.bigWig GRCh38 released mild to moderate bottlenecking ENCFF445VZZ bigWig signal p-value ENCSR914NEI ChIP-seq EFO:0002067 K562 cell line Homo sapiens MTA3-human ENCAB000BML DNA formaldehyde False 2017-06-07 ENCODE 3 ENCFF508SQK, ENCFF910IKB 1234118152 ENCODE Processing Pipeline c58818c27b7a2f52491083bb85032fb1 https://www.encodeproject.org/files/ENCFF445VZZ/@@download/ENCFF445VZZ.bigWig GRCh38 released mild to moderate bottlenecking ENCFF230BXX bed narrowPeak peaks ENCSR914NEI ChIP-seq EFO:0002067 K562 cell line Homo sapiens MTA3-human ENCAB000BML DNA formaldehyde False 2017-06-07 ENCODE 2 ENCFF227IZS, ENCFF560QOE 7082043 ENCODE Processing Pipeline 14225da22f608cc33e0ed62ff29b2748 https://www.encodeproject.org/files/ENCFF230BXX/@@download/ENCFF230BXX.bed.gz GRCh38 released mild to moderate bottlenecking ENCFF732HRK bigBed narrowPeak peaks ENCSR914NEI ChIP-seq EFO:0002067 K562 cell line Homo sapiens MTA3-human ENCAB000BML DNA formaldehyde False 2017-06-07 ENCODE 3 ENCFF434RKN 13146307 ENCODE Processing Pipeline fa9725304c806b6527b5af0f0912f7cb https://www.encodeproject.org/files/ENCFF732HRK/@@download/ENCFF732HRK.bigBed GRCh38 released mild to moderate bottlenecking ENCFF886VNQ bam unfiltered alignments ENCSR914NEI ChIP-seq EFO:0002067 K562 cell line Homo sapiens MTA3-human ENCAB000BML DNA formaldehyde False 2017-06-07 ENCODE 2 100 ENCFF002DPG, ENCFF002EFW, ENCFF807MUK 6959155504 ENCODE Processing Pipeline 1f7a0d7bf4180eaf1f38e5a842b1cd5c https://www.encodeproject.org/files/ENCFF886VNQ/@@download/ENCFF886VNQ.bam hg19 released mild to moderate bottlenecking ENCFF256EDM bam alignments ENCSR914NEI ChIP-seq EFO:0002067 K562 cell line Homo sapiens MTA3-human ENCAB000BML DNA formaldehyde False 2017-06-07 ENCODE 2 100 ENCFF002DPG, ENCFF002EFW, ENCFF807MUK 5417281757 ENCODE Processing Pipeline 149ac0e9c434cbfe71da540a1d07cc6f https://www.encodeproject.org/files/ENCFF256EDM/@@download/ENCFF256EDM.bam hg19 released mild to moderate bottlenecking ENCFF998FDB bigWig fold change over control ENCSR914NEI ChIP-seq EFO:0002067 K562 cell line Homo sapiens MTA3-human ENCAB000BML DNA formaldehyde False 2017-06-07 ENCODE 2 ENCFF051LWI, ENCFF256EDM 1326067233 ENCODE Processing Pipeline e3131bf1069c37f1ffc2e4c7190c5713 https://www.encodeproject.org/files/ENCFF998FDB/@@download/ENCFF998FDB.bigWig hg19 released mild to moderate bottlenecking ENCFF861ZTZ bigBed narrowPeak peaks ENCSR914NEI ChIP-seq EFO:0002067 K562 cell line Homo sapiens MTA3-human ENCAB000BML DNA formaldehyde False 2017-06-07 ENCODE 2 ENCFF976RBY 12886766 ENCODE Processing Pipeline fc4483197c4e1daa1bfc6d7baa2b3ec9 https://www.encodeproject.org/files/ENCFF861ZTZ/@@download/ENCFF861ZTZ.bigBed hg19 released mild to moderate bottlenecking ENCFF196SWJ bigBed narrowPeak optimal idr thresholded peaks ENCSR914NEI ChIP-seq EFO:0002067 K562 cell line Homo sapiens MTA3-human ENCAB000BML DNA formaldehyde False 2017-06-07 ENCODE 2, 3 ENCFF350YXB 1176415 ENCODE Processing Pipeline a7eb3e05c7a6248cf2c421d16a01ce71 https://www.encodeproject.org/files/ENCFF196SWJ/@@download/ENCFF196SWJ.bigBed hg19 released mild to moderate bottlenecking ENCFF749IJG bigWig signal p-value ENCSR914NEI ChIP-seq EFO:0002067 K562 cell line Homo sapiens MTA3-human ENCAB000BML DNA formaldehyde False 2017-06-07 ENCODE 2 ENCFF051LWI, ENCFF256EDM 1265139206 ENCODE Processing Pipeline bd4717ec671839f1d0aeb0706d348139 https://www.encodeproject.org/files/ENCFF749IJG/@@download/ENCFF749IJG.bigWig hg19 released mild to moderate bottlenecking ENCFF554TRW bigWig signal p-value ENCSR914NEI ChIP-seq EFO:0002067 K562 cell line Homo sapiens MTA3-human ENCAB000BML DNA formaldehyde False 2017-06-07 ENCODE 2, 3 ENCFF051LWI, ENCFF256EDM, ENCFF581ZJL, ENCFF642HGZ 2116130154 ENCODE Processing Pipeline 971ce6e1b76d3c26d1f2fef8828b495e https://www.encodeproject.org/files/ENCFF554TRW/@@download/ENCFF554TRW.bigWig hg19 released mild to moderate bottlenecking ENCFF883SHN bed narrowPeak peaks ENCSR914NEI ChIP-seq EFO:0002067 K562 cell line Homo sapiens MTA3-human ENCAB000BML DNA formaldehyde False 2017-06-07 ENCODE 2, 3 ENCFF051LWI, ENCFF256EDM, ENCFF581ZJL, ENCFF642HGZ 7275592 ENCODE Processing Pipeline d52c2dfc5e7b427d4e4b4a850ee1f509 https://www.encodeproject.org/files/ENCFF883SHN/@@download/ENCFF883SHN.bed.gz hg19 released mild to moderate bottlenecking ENCFF785CYJ bigBed narrowPeak peaks ENCSR914NEI ChIP-seq EFO:0002067 K562 cell line Homo sapiens MTA3-human ENCAB000BML DNA formaldehyde False 2017-06-07 ENCODE 2, 3 ENCFF883SHN 12781963 ENCODE Processing Pipeline 777cc03065a0cc94cd5beb4726eeb2b4 https://www.encodeproject.org/files/ENCFF785CYJ/@@download/ENCFF785CYJ.bigBed hg19 released mild to moderate bottlenecking ENCFF120WQF bed narrowPeak conservative idr thresholded peaks ENCSR914NEI ChIP-seq EFO:0002067 K562 cell line Homo sapiens MTA3-human ENCAB000BML DNA formaldehyde False 2017-06-07 ENCODE 2, 3 ENCFF001TDO, ENCFF326WKP, ENCFF883SHN, ENCFF976RBY 379571 ENCODE Processing Pipeline c1f70651c0b600a10a3f8c043cf813e8 https://www.encodeproject.org/files/ENCFF120WQF/@@download/ENCFF120WQF.bed.gz hg19 released mild to moderate bottlenecking ENCFF573SRH bigWig signal p-value ENCSR914NEI ChIP-seq EFO:0002067 K562 cell line Homo sapiens MTA3-human ENCAB000BML DNA formaldehyde False 2017-06-07 ENCODE 3 ENCFF581ZJL, ENCFF642HGZ 1242020161 ENCODE Processing Pipeline 9fec6598355120b7a7682b7923a9fd1f https://www.encodeproject.org/files/ENCFF573SRH/@@download/ENCFF573SRH.bigWig hg19 released mild to moderate bottlenecking ENCFF453NPD bigWig fold change over control ENCSR914NEI ChIP-seq EFO:0002067 K562 cell line Homo sapiens MTA3-human ENCAB000BML DNA formaldehyde False 2017-06-07 ENCODE 3 ENCFF581ZJL, ENCFF642HGZ 1386490040 ENCODE Processing Pipeline 901c396ad230e346e7a2e105b742f3ae https://www.encodeproject.org/files/ENCFF453NPD/@@download/ENCFF453NPD.bigWig hg19 released mild to moderate bottlenecking ENCFF230NBV bigWig fold change over control ENCSR914NEI ChIP-seq EFO:0002067 K562 cell line Homo sapiens MTA3-human ENCAB000BML DNA formaldehyde False 2017-06-07 ENCODE 2, 3 ENCFF051LWI, ENCFF256EDM, ENCFF581ZJL, ENCFF642HGZ 2326527156 ENCODE Processing Pipeline 85e3d93fe99648b49c86d98e385f76af https://www.encodeproject.org/files/ENCFF230NBV/@@download/ENCFF230NBV.bigWig hg19 released mild to moderate bottlenecking ENCFF976RBY bed narrowPeak peaks ENCSR914NEI ChIP-seq EFO:0002067 K562 cell line Homo sapiens MTA3-human ENCAB000BML DNA formaldehyde False 2017-06-07 ENCODE 2 ENCFF051LWI, ENCFF256EDM 7083861 ENCODE Processing Pipeline 4e66d1f98e7e419ea59e2f50a4f92889 https://www.encodeproject.org/files/ENCFF976RBY/@@download/ENCFF976RBY.bed.gz hg19 released mild to moderate bottlenecking ENCFF326WKP bed narrowPeak peaks ENCSR914NEI ChIP-seq EFO:0002067 K562 cell line Homo sapiens MTA3-human ENCAB000BML DNA formaldehyde False 2017-06-07 ENCODE 3 ENCFF581ZJL, ENCFF642HGZ 6920691 ENCODE Processing Pipeline ea33ee518a15d0bfeef4315a1e029870 https://www.encodeproject.org/files/ENCFF326WKP/@@download/ENCFF326WKP.bed.gz hg19 released mild to moderate bottlenecking ENCFF902RQS bigBed narrowPeak peaks ENCSR914NEI ChIP-seq EFO:0002067 K562 cell line Homo sapiens MTA3-human ENCAB000BML DNA formaldehyde False 2017-06-07 ENCODE 3 ENCFF326WKP 13125136 ENCODE Processing Pipeline 927ce0b4e182c67de88197f4b47ba20b https://www.encodeproject.org/files/ENCFF902RQS/@@download/ENCFF902RQS.bigBed hg19 released mild to moderate bottlenecking ENCFF469FIA bigBed narrowPeak conservative idr thresholded peaks ENCSR914NEI ChIP-seq EFO:0002067 K562 cell line Homo sapiens MTA3-human ENCAB000BML DNA formaldehyde False 2017-06-07 ENCODE 2, 3 ENCFF120WQF 896770 ENCODE Processing Pipeline dc4d8caf34a2da6ad4bdcf79dc7367cb https://www.encodeproject.org/files/ENCFF469FIA/@@download/ENCFF469FIA.bigBed hg19 released mild to moderate bottlenecking ENCFF350YXB bed narrowPeak optimal idr thresholded peaks ENCSR914NEI ChIP-seq EFO:0002067 K562 cell line Homo sapiens MTA3-human ENCAB000BML DNA formaldehyde False 2017-06-07 ENCODE 2, 3 ENCFF001TDO, ENCFF326WKP, ENCFF883SHN, ENCFF976RBY 528070 ENCODE Processing Pipeline 3ea3ef0e96deacc4e08f7eb62dbcdac3 https://www.encodeproject.org/files/ENCFF350YXB/@@download/ENCFF350YXB.bed.gz hg19 released mild to moderate bottlenecking ENCFF001RUL fastq reads ENCSR000FCD ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMAD5-human ENCAB000AAG DNA see document see document False 2014-07-07 ENCODE 1 1 50 single-ended 1642869457 Richard Myers, HAIB 834b82fbdae742cd8680e7be69c41165 SRA:SRR5331594 https://www.encodeproject.org/files/ENCFF001RUL/@@download/ENCFF001RUL.fastq.gz Illumina HiSeq 2000 /files/ENCFF001RVQ/ released antibody characterized with exemption ENCFF001RUM fastq reads ENCSR000FCD ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMAD5-human ENCAB000AAG DNA see document see document False 2014-07-07 ENCODE 2 1 50 single-ended 1959742577 Richard Myers, HAIB 4e63d60d143676d771333502004d6de9 SRA:SRR5331595 https://www.encodeproject.org/files/ENCFF001RUM/@@download/ENCFF001RUM.fastq.gz Illumina HiSeq 2000 /files/ENCFF001RVO/ released antibody characterized with exemption ENCFF820SNZ bam alignments ENCSR000FCD ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMAD5-human ENCAB000AAG DNA see document see document False 2014-07-07 ENCODE 1 ENCFF001RUL, ENCFF807MUK 1313528763 ENCODE Processing Pipeline 2366d44c8ad24b78b9a850b4428fd12a https://www.encodeproject.org/files/ENCFF820SNZ/@@download/ENCFF820SNZ.bam hg19 released antibody characterized with exemption ENCFF641CKM bam alignments ENCSR000FCD ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMAD5-human ENCAB000AAG DNA see document see document False 2014-07-07 ENCODE 2 ENCFF001RUM, ENCFF807MUK 1401989953 ENCODE Processing Pipeline c943b52a7295a776d066dda48a57effc https://www.encodeproject.org/files/ENCFF641CKM/@@download/ENCFF641CKM.bam hg19 released antibody characterized with exemption ENCFF674QBG bigWig signal p-value ENCSR000FCD ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMAD5-human ENCAB000AAG DNA see document see document False 2014-07-07 ENCODE 2 ENCFF061QOJ, ENCFF701AOA 787268136 ENCODE Processing Pipeline 2cc1ea74fbe8f1d2f0885d8d273054e8 https://www.encodeproject.org/files/ENCFF674QBG/@@download/ENCFF674QBG.bigWig hg19 released antibody characterized with exemption ENCFF382IWI bigWig fold change over control ENCSR000FCD ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMAD5-human ENCAB000AAG DNA see document see document False 2014-07-07 ENCODE 2 ENCFF061QOJ, ENCFF701AOA 622083962 ENCODE Processing Pipeline e0b3ddbf45d6d9f8fc73255e51db224b https://www.encodeproject.org/files/ENCFF382IWI/@@download/ENCFF382IWI.bigWig hg19 released antibody characterized with exemption ENCFF895SOZ bam unfiltered alignments ENCSR000FCD ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMAD5-human ENCAB000AAG DNA see document see document False 2014-07-07 ENCODE 2 50 ENCFF001RUM, ENCFF643CGH 1997203362 ENCODE Processing Pipeline 426064d8689e2740dbec39db15da86a9 https://www.encodeproject.org/files/ENCFF895SOZ/@@download/ENCFF895SOZ.bam GRCh38 released antibody characterized with exemption ENCFF889IJX bam unfiltered alignments ENCSR000FCD ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMAD5-human ENCAB000AAG DNA see document see document False 2014-07-07 ENCODE 1 50 ENCFF001RUL, ENCFF643CGH 1752393099 ENCODE Processing Pipeline 02fe68de6f6641af1a1d54ab4d43a087 https://www.encodeproject.org/files/ENCFF889IJX/@@download/ENCFF889IJX.bam GRCh38 released antibody characterized with exemption ENCFF412DRO bam alignments ENCSR000FCD ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMAD5-human ENCAB000AAG DNA see document see document False 2014-07-07 ENCODE 2 50 ENCFF001RUM, ENCFF643CGH 1401333874 ENCODE Processing Pipeline ef9ef6bc208e78dd1e72f74101d4e9ca https://www.encodeproject.org/files/ENCFF412DRO/@@download/ENCFF412DRO.bam GRCh38 released antibody characterized with exemption ENCFF033UID bam alignments ENCSR000FCD ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMAD5-human ENCAB000AAG DNA see document see document False 2014-07-07 ENCODE 1 50 ENCFF001RUL, ENCFF643CGH 1313034347 ENCODE Processing Pipeline bd34b869ee9a1699ed68552245fe3a0b https://www.encodeproject.org/files/ENCFF033UID/@@download/ENCFF033UID.bam GRCh38 released antibody characterized with exemption ENCFF016LUR bigWig signal p-value ENCSR000FCD ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMAD5-human ENCAB000AAG DNA see document see document False 2014-07-07 ENCODE 1 ENCFF033UID, ENCFF505ZUJ 625666621 ENCODE Processing Pipeline 2d2898074280aa5f4550e852d7780e6c https://www.encodeproject.org/files/ENCFF016LUR/@@download/ENCFF016LUR.bigWig GRCh38 released antibody characterized with exemption ENCFF977VWN bigWig signal p-value ENCSR000FCD ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMAD5-human ENCAB000AAG DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF033UID, ENCFF332SVJ, ENCFF412DRO, ENCFF505ZUJ 1356362507 ENCODE Processing Pipeline 1b65bea3c1628e96003a28e5bc2ea70f https://www.encodeproject.org/files/ENCFF977VWN/@@download/ENCFF977VWN.bigWig GRCh38 released antibody characterized with exemption ENCFF392MIK bigWig signal p-value ENCSR000FCD ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMAD5-human ENCAB000AAG DNA see document see document False 2014-07-07 ENCODE 2 ENCFF332SVJ, ENCFF412DRO 752535303 ENCODE Processing Pipeline 931979369c264eb21a5ddb5b0b2cc4fd https://www.encodeproject.org/files/ENCFF392MIK/@@download/ENCFF392MIK.bigWig GRCh38 released antibody characterized with exemption ENCFF935NYZ bigWig fold change over control ENCSR000FCD ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMAD5-human ENCAB000AAG DNA see document see document False 2014-07-07 ENCODE 1 ENCFF033UID, ENCFF505ZUJ 558508108 ENCODE Processing Pipeline 87de8698419566a32949ba2eefa428e4 https://www.encodeproject.org/files/ENCFF935NYZ/@@download/ENCFF935NYZ.bigWig GRCh38 released antibody characterized with exemption ENCFF707MLG bigWig fold change over control ENCSR000FCD ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMAD5-human ENCAB000AAG DNA see document see document False 2014-07-07 ENCODE 2 ENCFF332SVJ, ENCFF412DRO 618791382 ENCODE Processing Pipeline 047c9e3212a8dd2527cab1da4fb5ce4d https://www.encodeproject.org/files/ENCFF707MLG/@@download/ENCFF707MLG.bigWig GRCh38 released antibody characterized with exemption ENCFF059XSX bigWig fold change over control ENCSR000FCD ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMAD5-human ENCAB000AAG DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF033UID, ENCFF332SVJ, ENCFF412DRO, ENCFF505ZUJ 1270257100 ENCODE Processing Pipeline 925b8e57ca2499b9299228b3392df726 https://www.encodeproject.org/files/ENCFF059XSX/@@download/ENCFF059XSX.bigWig GRCh38 released antibody characterized with exemption ENCFF387MDX bed narrowPeak peaks ENCSR000FCD ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMAD5-human ENCAB000AAG DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF033UID, ENCFF332SVJ, ENCFF412DRO, ENCFF505ZUJ 7184179 ENCODE Processing Pipeline 3fd2a3ed842a80455970f014fbf56c10 https://www.encodeproject.org/files/ENCFF387MDX/@@download/ENCFF387MDX.bed.gz GRCh38 released antibody characterized with exemption ENCFF719NDZ bigBed narrowPeak peaks ENCSR000FCD ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMAD5-human ENCAB000AAG DNA see document see document False 2014-07-07 ENCODE 2 ENCFF904ELN 12819286 ENCODE Processing Pipeline f99113c4ebb463232d40e66d730bd7c7 https://www.encodeproject.org/files/ENCFF719NDZ/@@download/ENCFF719NDZ.bigBed GRCh38 released antibody characterized with exemption ENCFF284GKR bigBed narrowPeak peaks ENCSR000FCD ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMAD5-human ENCAB000AAG DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF387MDX 12863754 ENCODE Processing Pipeline 1bc407f34e41b218a66903aee311c329 https://www.encodeproject.org/files/ENCFF284GKR/@@download/ENCFF284GKR.bigBed GRCh38 released antibody characterized with exemption ENCFF610YNO bed narrowPeak peaks ENCSR000FCD ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMAD5-human ENCAB000AAG DNA see document see document False 2014-07-07 ENCODE 1 ENCFF033UID, ENCFF505ZUJ 6394031 ENCODE Processing Pipeline bcf49f2753707148c025f7cd24f8f2a2 https://www.encodeproject.org/files/ENCFF610YNO/@@download/ENCFF610YNO.bed.gz GRCh38 released antibody characterized with exemption ENCFF904ELN bed narrowPeak peaks ENCSR000FCD ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMAD5-human ENCAB000AAG DNA see document see document False 2014-07-07 ENCODE 2 ENCFF332SVJ, ENCFF412DRO 6800130 ENCODE Processing Pipeline 390ee1ca8c1ea1096b445e6e99f9980b https://www.encodeproject.org/files/ENCFF904ELN/@@download/ENCFF904ELN.bed.gz GRCh38 released antibody characterized with exemption ENCFF201YMA bigBed narrowPeak peaks ENCSR000FCD ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMAD5-human ENCAB000AAG DNA see document see document False 2014-07-07 ENCODE 1 ENCFF610YNO 13057783 ENCODE Processing Pipeline 7bf9bef4b622cce389580a33cfc7cf4c https://www.encodeproject.org/files/ENCFF201YMA/@@download/ENCFF201YMA.bigBed GRCh38 released antibody characterized with exemption ENCFF782OUZ bigBed narrowPeak conservative idr thresholded peaks ENCSR000FCD ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMAD5-human ENCAB000AAG DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF548ITQ 786201 ENCODE Processing Pipeline 24661e5f422f2a4a931b5eadf660d7e6 https://www.encodeproject.org/files/ENCFF782OUZ/@@download/ENCFF782OUZ.bigBed GRCh38 released antibody characterized with exemption ENCFF548ITQ bed narrowPeak conservative idr thresholded peaks ENCSR000FCD ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMAD5-human ENCAB000AAG DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF387MDX, ENCFF419RSJ, ENCFF610YNO, ENCFF904ELN 300978 ENCODE Processing Pipeline b9119c3ba9d91361e3b906e073ad32e3 https://www.encodeproject.org/files/ENCFF548ITQ/@@download/ENCFF548ITQ.bed.gz GRCh38 released antibody characterized with exemption ENCFF573ZWL bigBed narrowPeak optimal idr thresholded peaks ENCSR000FCD ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMAD5-human ENCAB000AAG DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF069AAY 966144 ENCODE Processing Pipeline 05012f3d4f0ebbe24af189f307871a2c https://www.encodeproject.org/files/ENCFF573ZWL/@@download/ENCFF573ZWL.bigBed GRCh38 released antibody characterized with exemption ENCFF069AAY bed narrowPeak optimal idr thresholded peaks ENCSR000FCD ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMAD5-human ENCAB000AAG DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF387MDX, ENCFF419RSJ, ENCFF610YNO, ENCFF904ELN 400019 ENCODE Processing Pipeline 4fae0f8dac0d78ddbd10368544c7f6a5 https://www.encodeproject.org/files/ENCFF069AAY/@@download/ENCFF069AAY.bed.gz GRCh38 released antibody characterized with exemption ENCFF701AOA bam alignments ENCSR000FCD ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMAD5-human ENCAB000AAG DNA see document see document False 2014-07-07 ENCODE 2 50 ENCFF001RUM, ENCFF807MUK 1401989981 ENCODE Processing Pipeline 886396e42d2767db9bd6c9e97183179e https://www.encodeproject.org/files/ENCFF701AOA/@@download/ENCFF701AOA.bam hg19 released antibody characterized with exemption ENCFF892AIU bam unfiltered alignments ENCSR000FCD ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMAD5-human ENCAB000AAG DNA see document see document False 2014-07-07 ENCODE 2 50 ENCFF001RUM, ENCFF807MUK 1996110281 ENCODE Processing Pipeline 1878afb148745ccb48dfd8d3658090af https://www.encodeproject.org/files/ENCFF892AIU/@@download/ENCFF892AIU.bam hg19 released antibody characterized with exemption ENCFF877BNT bam unfiltered alignments ENCSR000FCD ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMAD5-human ENCAB000AAG DNA see document see document False 2014-07-07 ENCODE 1 50 ENCFF001RUL, ENCFF807MUK 1750014544 ENCODE Processing Pipeline fd2ad31c91540d62f0fd19fe8a463849 https://www.encodeproject.org/files/ENCFF877BNT/@@download/ENCFF877BNT.bam hg19 released antibody characterized with exemption ENCFF310TZE bam alignments ENCSR000FCD ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMAD5-human ENCAB000AAG DNA see document see document False 2014-07-07 ENCODE 1 50 ENCFF001RUL, ENCFF807MUK 1313528791 ENCODE Processing Pipeline 0a2369d3a599e39d68ebd1a687712382 https://www.encodeproject.org/files/ENCFF310TZE/@@download/ENCFF310TZE.bam hg19 released antibody characterized with exemption ENCFF254EUL bigWig signal p-value ENCSR000FCD ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMAD5-human ENCAB000AAG DNA see document see document False 2014-07-07 ENCODE 1 ENCFF310TZE, ENCFF747SPK 685692749 ENCODE Processing Pipeline 0b2cd8dbec0761a2db79379beea16209 https://www.encodeproject.org/files/ENCFF254EUL/@@download/ENCFF254EUL.bigWig hg19 released antibody characterized with exemption ENCFF177KXS bigWig fold change over control ENCSR000FCD ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMAD5-human ENCAB000AAG DNA see document see document False 2014-07-07 ENCODE 1 ENCFF310TZE, ENCFF747SPK 554899467 ENCODE Processing Pipeline 58b29c363adced03e69daca59be92e85 https://www.encodeproject.org/files/ENCFF177KXS/@@download/ENCFF177KXS.bigWig hg19 released antibody characterized with exemption ENCFF235RTU bigWig fold change over control ENCSR000FCD ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMAD5-human ENCAB000AAG DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF061QOJ, ENCFF310TZE, ENCFF701AOA, ENCFF747SPK 1272334142 ENCODE Processing Pipeline d77fa00a35e579565dcb218da6c8a719 https://www.encodeproject.org/files/ENCFF235RTU/@@download/ENCFF235RTU.bigWig hg19 released antibody characterized with exemption ENCFF965ONO bigBed narrowPeak peaks ENCSR000FCD ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMAD5-human ENCAB000AAG DNA see document see document False 2014-07-07 ENCODE 1 ENCFF131YKB 13039717 ENCODE Processing Pipeline b20f967a96986846abdcde29135bdba9 https://www.encodeproject.org/files/ENCFF965ONO/@@download/ENCFF965ONO.bigBed hg19 released antibody characterized with exemption ENCFF842BNK bigBed narrowPeak peaks ENCSR000FCD ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMAD5-human ENCAB000AAG DNA see document see document False 2014-07-07 ENCODE 2 ENCFF875TQG 12811998 ENCODE Processing Pipeline 6705b73e7ba39165a3eccbf3d0a3f892 https://www.encodeproject.org/files/ENCFF842BNK/@@download/ENCFF842BNK.bigBed hg19 released antibody characterized with exemption ENCFF410JJC bed narrowPeak conservative idr thresholded peaks ENCSR000FCD ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMAD5-human ENCAB000AAG DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF001TDO, ENCFF131YKB, ENCFF235FTG, ENCFF875TQG 299981 ENCODE Processing Pipeline 994f8104a748fbc318af07ff06bd751c https://www.encodeproject.org/files/ENCFF410JJC/@@download/ENCFF410JJC.bed.gz hg19 released antibody characterized with exemption ENCFF131YKB bed narrowPeak peaks ENCSR000FCD ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMAD5-human ENCAB000AAG DNA see document see document False 2014-07-07 ENCODE 1 ENCFF310TZE, ENCFF747SPK 6404445 ENCODE Processing Pipeline ce527a6d51afbb56bee2e1ff7aa357bf https://www.encodeproject.org/files/ENCFF131YKB/@@download/ENCFF131YKB.bed.gz hg19 released antibody characterized with exemption ENCFF875TQG bed narrowPeak peaks ENCSR000FCD ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMAD5-human ENCAB000AAG DNA see document see document False 2014-07-07 ENCODE 2 ENCFF061QOJ, ENCFF701AOA 6802573 ENCODE Processing Pipeline 51bb4cfa7573995a9a30f2d4d51524c1 https://www.encodeproject.org/files/ENCFF875TQG/@@download/ENCFF875TQG.bed.gz hg19 released antibody characterized with exemption ENCFF079EFI bigBed narrowPeak optimal idr thresholded peaks ENCSR000FCD ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMAD5-human ENCAB000AAG DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF178MOP 963963 ENCODE Processing Pipeline d62a0aaef6139d4594c8b1fbb30f8907 https://www.encodeproject.org/files/ENCFF079EFI/@@download/ENCFF079EFI.bigBed hg19 released antibody characterized with exemption ENCFF166SEG bigWig signal p-value ENCSR000FCD ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMAD5-human ENCAB000AAG DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF061QOJ, ENCFF310TZE, ENCFF701AOA, ENCFF747SPK 1225888351 ENCODE Processing Pipeline 4d14bf7e2aa45fedb63d9a8775861172 https://www.encodeproject.org/files/ENCFF166SEG/@@download/ENCFF166SEG.bigWig hg19 released antibody characterized with exemption ENCFF751OGO bigBed narrowPeak peaks ENCSR000FCD ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMAD5-human ENCAB000AAG DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF235FTG 12855971 ENCODE Processing Pipeline 29a24805491c7190438e891408717912 https://www.encodeproject.org/files/ENCFF751OGO/@@download/ENCFF751OGO.bigBed hg19 released antibody characterized with exemption ENCFF235FTG bed narrowPeak peaks ENCSR000FCD ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMAD5-human ENCAB000AAG DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF061QOJ, ENCFF310TZE, ENCFF701AOA, ENCFF747SPK 7184972 ENCODE Processing Pipeline ebea0ab3ee602810ee67f0f4c8e5709b https://www.encodeproject.org/files/ENCFF235FTG/@@download/ENCFF235FTG.bed.gz hg19 released antibody characterized with exemption ENCFF163TFW bigBed narrowPeak conservative idr thresholded peaks ENCSR000FCD ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMAD5-human ENCAB000AAG DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF410JJC 782926 ENCODE Processing Pipeline b2a3e3af765ee5ee6a5a99192c2d9ba4 https://www.encodeproject.org/files/ENCFF163TFW/@@download/ENCFF163TFW.bigBed hg19 released antibody characterized with exemption ENCFF178MOP bed narrowPeak optimal idr thresholded peaks ENCSR000FCD ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMAD5-human ENCAB000AAG DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF001TDO, ENCFF131YKB, ENCFF235FTG, ENCFF875TQG 398842 ENCODE Processing Pipeline 8793c337b4cbb250f1ea3226f4282427 https://www.encodeproject.org/files/ENCFF178MOP/@@download/ENCFF178MOP.bed.gz hg19 released antibody characterized with exemption ENCFF460VIY bam unfiltered alignments ENCSR621ATC ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF184-human ENCAB952VOF DNA False 2018-01-26 ENCODE 1 100 ENCFF126NLO, ENCFF358CMD, ENCFF807MUK 4162480935 ENCODE Processing Pipeline d2b4c579c029981b752c299d749b7a10 https://www.encodeproject.org/files/ENCFF460VIY/@@download/ENCFF460VIY.bam hg19 released low read depth experiment not submitted to GEO partially characterized antibody ENCFF663AYJ bam unfiltered alignments ENCSR621ATC ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF184-human ENCAB952VOF DNA False 2018-01-26 ENCODE 2 100 ENCFF432KKI, ENCFF807MUK, ENCFF971GFY 4800179221 ENCODE Processing Pipeline f7ff3a83bf6d8d322388108c172ac382 https://www.encodeproject.org/files/ENCFF663AYJ/@@download/ENCFF663AYJ.bam hg19 released low read depth experiment not submitted to GEO partially characterized antibody ENCFF432KKI fastq reads ENCSR621ATC ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF184-human ENCAB952VOF DNA False 2018-01-26 ENCODE 2 1 100 paired-ended 2 ENCFF971GFY 2180570220 Michael Snyder, Stanford 82ce9dad11aa15eaf80fb43b9cab66b7 https://www.encodeproject.org/files/ENCFF432KKI/@@download/ENCFF432KKI.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFA/ released low read depth experiment not submitted to GEO partially characterized antibody ENCFF358CMD fastq reads ENCSR621ATC ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF184-human ENCAB952VOF DNA False 2018-01-26 ENCODE 1 1 100 paired-ended 1 ENCFF126NLO 1896189834 Michael Snyder, Stanford a5fc00183d3016717bf5ca3f15c77db6 https://www.encodeproject.org/files/ENCFF358CMD/@@download/ENCFF358CMD.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFF/ released low read depth experiment not submitted to GEO partially characterized antibody ENCFF126NLO fastq reads ENCSR621ATC ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF184-human ENCAB952VOF DNA False 2018-01-26 ENCODE 1 1 100 paired-ended 2 ENCFF358CMD 1874002133 Michael Snyder, Stanford 853de97885ef73f46c26082a6f23bb05 https://www.encodeproject.org/files/ENCFF126NLO/@@download/ENCFF126NLO.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFH/ released low read depth experiment not submitted to GEO partially characterized antibody ENCFF971GFY fastq reads ENCSR621ATC ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF184-human ENCAB952VOF DNA False 2018-01-26 ENCODE 2 1 100 paired-ended 1 ENCFF432KKI 2211092366 Michael Snyder, Stanford 58b67ded9104e4dab8c2d08353bc0881 https://www.encodeproject.org/files/ENCFF971GFY/@@download/ENCFF971GFY.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFD/ released low read depth experiment not submitted to GEO partially characterized antibody ENCFF330WGJ bam alignments ENCSR621ATC ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF184-human ENCAB952VOF DNA False 2018-01-26 ENCODE 2 100 ENCFF432KKI, ENCFF807MUK, ENCFF971GFY 4145841335 ENCODE Processing Pipeline 3134b244641c33f294dc31f7bab1bf3f https://www.encodeproject.org/files/ENCFF330WGJ/@@download/ENCFF330WGJ.bam hg19 released low read depth experiment not submitted to GEO partially characterized antibody ENCFF634JQQ bam alignments ENCSR621ATC ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF184-human ENCAB952VOF DNA False 2018-01-26 ENCODE 1 100 ENCFF126NLO, ENCFF358CMD, ENCFF807MUK 3486116166 ENCODE Processing Pipeline a8f8c05808c51e772e25453e99bf3e88 https://www.encodeproject.org/files/ENCFF634JQQ/@@download/ENCFF634JQQ.bam hg19 released low read depth experiment not submitted to GEO partially characterized antibody ENCFF292ZDX bigWig signal p-value ENCSR621ATC ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF184-human ENCAB952VOF DNA False 2018-01-26 ENCODE 1 ENCFF581ZJL, ENCFF634JQQ 966392738 ENCODE Processing Pipeline 8767bad9d4a92caa0cda9dd0919e8cb0 https://www.encodeproject.org/files/ENCFF292ZDX/@@download/ENCFF292ZDX.bigWig hg19 released low read depth experiment not submitted to GEO partially characterized antibody ENCFF719MGA bigWig signal p-value ENCSR621ATC ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF184-human ENCAB952VOF DNA False 2018-01-26 ENCODE 2 ENCFF051LWI, ENCFF330WGJ 1104440662 ENCODE Processing Pipeline f7b4b14502ef94c054c8ea5aa7346dfe https://www.encodeproject.org/files/ENCFF719MGA/@@download/ENCFF719MGA.bigWig hg19 released low read depth experiment not submitted to GEO partially characterized antibody ENCFF799VYS bigWig signal p-value ENCSR621ATC ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF184-human ENCAB952VOF DNA False 2018-01-26 ENCODE 1, 2 ENCFF051LWI, ENCFF330WGJ, ENCFF581ZJL, ENCFF634JQQ 1966811672 ENCODE Processing Pipeline f7c31b1e09329cc2c3cda0661d721600 https://www.encodeproject.org/files/ENCFF799VYS/@@download/ENCFF799VYS.bigWig hg19 released low read depth experiment not submitted to GEO partially characterized antibody ENCFF732ETO bigWig fold change over control ENCSR621ATC ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF184-human ENCAB952VOF DNA False 2018-01-26 ENCODE 1 ENCFF581ZJL, ENCFF634JQQ 1072719364 ENCODE Processing Pipeline 90fd923c9f5ef38bc95a186287b5c21d https://www.encodeproject.org/files/ENCFF732ETO/@@download/ENCFF732ETO.bigWig hg19 released low read depth experiment not submitted to GEO partially characterized antibody ENCFF308TXS bigWig fold change over control ENCSR621ATC ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF184-human ENCAB952VOF DNA False 2018-01-26 ENCODE 2 ENCFF051LWI, ENCFF330WGJ 1143630115 ENCODE Processing Pipeline 1617603d2ee71b8ae3295d06b8033411 https://www.encodeproject.org/files/ENCFF308TXS/@@download/ENCFF308TXS.bigWig hg19 released low read depth experiment not submitted to GEO partially characterized antibody ENCFF806QJB bigWig fold change over control ENCSR621ATC ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF184-human ENCAB952VOF DNA False 2018-01-26 ENCODE 1, 2 ENCFF051LWI, ENCFF330WGJ, ENCFF581ZJL, ENCFF634JQQ 2049415502 ENCODE Processing Pipeline 1c0e17155afabe31ef41593072d3ee8e https://www.encodeproject.org/files/ENCFF806QJB/@@download/ENCFF806QJB.bigWig hg19 released low read depth experiment not submitted to GEO partially characterized antibody ENCFF544REW bed narrowPeak peaks ENCSR621ATC ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF184-human ENCAB952VOF DNA False 2018-01-26 ENCODE 1 ENCFF581ZJL, ENCFF634JQQ 6694070 ENCODE Processing Pipeline 59eacda1b4c81306cc76878e34ac55dd https://www.encodeproject.org/files/ENCFF544REW/@@download/ENCFF544REW.bed.gz hg19 released low read depth experiment not submitted to GEO partially characterized antibody ENCFF729TVF bed narrowPeak peaks ENCSR621ATC ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF184-human ENCAB952VOF DNA False 2018-01-26 ENCODE 1, 2 ENCFF051LWI, ENCFF330WGJ, ENCFF581ZJL, ENCFF634JQQ 7241031 ENCODE Processing Pipeline b120d41e06e0664f32c740a42e0d4006 https://www.encodeproject.org/files/ENCFF729TVF/@@download/ENCFF729TVF.bed.gz hg19 released low read depth experiment not submitted to GEO partially characterized antibody ENCFF422XRA bed narrowPeak peaks ENCSR621ATC ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF184-human ENCAB952VOF DNA False 2018-01-26 ENCODE 2 ENCFF051LWI, ENCFF330WGJ 6984393 ENCODE Processing Pipeline ca24922c8643afe2720b83cc333e2c6b https://www.encodeproject.org/files/ENCFF422XRA/@@download/ENCFF422XRA.bed.gz hg19 released low read depth experiment not submitted to GEO partially characterized antibody ENCFF064VMH bigBed narrowPeak peaks ENCSR621ATC ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF184-human ENCAB952VOF DNA False 2018-01-26 ENCODE 1 ENCFF544REW 13237406 ENCODE Processing Pipeline ebfb4e75ce0ec503053c10aae352b4ae https://www.encodeproject.org/files/ENCFF064VMH/@@download/ENCFF064VMH.bigBed hg19 released low read depth experiment not submitted to GEO partially characterized antibody ENCFF004ZFS bigBed narrowPeak peaks ENCSR621ATC ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF184-human ENCAB952VOF DNA False 2018-01-26 ENCODE 2 ENCFF422XRA 13077307 ENCODE Processing Pipeline e496bf9d2bb953df3367fc07451ce212 https://www.encodeproject.org/files/ENCFF004ZFS/@@download/ENCFF004ZFS.bigBed hg19 released low read depth experiment not submitted to GEO partially characterized antibody ENCFF591EXX bigBed narrowPeak peaks ENCSR621ATC ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF184-human ENCAB952VOF DNA False 2018-01-26 ENCODE 1, 2 ENCFF729TVF 12984081 ENCODE Processing Pipeline b912e014dfcfb7f64725bcbaf3ce3a5a https://www.encodeproject.org/files/ENCFF591EXX/@@download/ENCFF591EXX.bigBed hg19 released low read depth experiment not submitted to GEO partially characterized antibody ENCFF077KPD bed narrowPeak conservative idr thresholded peaks ENCSR621ATC ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF184-human ENCAB952VOF DNA False 2018-01-26 ENCODE 1, 2 ENCFF001TDO, ENCFF422XRA, ENCFF544REW, ENCFF729TVF 194170 ENCODE Processing Pipeline 5852f52e0a7df3795881f08be28d5b06 https://www.encodeproject.org/files/ENCFF077KPD/@@download/ENCFF077KPD.bed.gz hg19 released low read depth experiment not submitted to GEO partially characterized antibody ENCFF554LHL bigBed narrowPeak conservative idr thresholded peaks ENCSR621ATC ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF184-human ENCAB952VOF DNA False 2018-01-26 ENCODE 1, 2 ENCFF077KPD 484690 ENCODE Processing Pipeline 23174df806338d8e1e44a8ac99400ece https://www.encodeproject.org/files/ENCFF554LHL/@@download/ENCFF554LHL.bigBed hg19 released low read depth experiment not submitted to GEO partially characterized antibody ENCFF728NEV bed narrowPeak optimal idr thresholded peaks ENCSR621ATC ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF184-human ENCAB952VOF DNA False 2018-01-26 ENCODE 1, 2 ENCFF001TDO, ENCFF422XRA, ENCFF544REW, ENCFF729TVF 260121 ENCODE Processing Pipeline fcf09c097b11a2cc09977c01b17abe51 https://www.encodeproject.org/files/ENCFF728NEV/@@download/ENCFF728NEV.bed.gz hg19 released low read depth experiment not submitted to GEO partially characterized antibody ENCFF758PXK bigBed narrowPeak optimal idr thresholded peaks ENCSR621ATC ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF184-human ENCAB952VOF DNA False 2018-01-26 ENCODE 1, 2 ENCFF728NEV 596097 ENCODE Processing Pipeline 9b5880b4fc0618ad7e86a47ea7de0e3f https://www.encodeproject.org/files/ENCFF758PXK/@@download/ENCFF758PXK.bigBed hg19 released low read depth experiment not submitted to GEO partially characterized antibody ENCFF893QTT bam unfiltered alignments ENCSR621ATC ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF184-human ENCAB952VOF DNA False 2018-01-26 ENCODE 1 100 ENCFF126NLO, ENCFF358CMD, ENCFF643CGH 4166061393 ENCODE Processing Pipeline a3fed4dadee4668d8282db4b88049a9e https://www.encodeproject.org/files/ENCFF893QTT/@@download/ENCFF893QTT.bam GRCh38 released low read depth experiment not submitted to GEO partially characterized antibody ENCFF472YRV bam unfiltered alignments ENCSR621ATC ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF184-human ENCAB952VOF DNA False 2018-01-26 ENCODE 2 100 ENCFF432KKI, ENCFF643CGH, ENCFF971GFY 4804198737 ENCODE Processing Pipeline 9a2d222d3956590c28aa60d65b1fdec6 https://www.encodeproject.org/files/ENCFF472YRV/@@download/ENCFF472YRV.bam GRCh38 released low read depth experiment not submitted to GEO partially characterized antibody ENCFF657ZIF bam alignments ENCSR621ATC ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF184-human ENCAB952VOF DNA False 2018-01-26 ENCODE 1 100 ENCFF126NLO, ENCFF358CMD, ENCFF643CGH 3487588864 ENCODE Processing Pipeline c2c4fdc785d39cbd1105f94f21ac533d https://www.encodeproject.org/files/ENCFF657ZIF/@@download/ENCFF657ZIF.bam GRCh38 released low read depth experiment not submitted to GEO partially characterized antibody ENCFF682PSU bam alignments ENCSR621ATC ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF184-human ENCAB952VOF DNA False 2018-01-26 ENCODE 2 100 ENCFF432KKI, ENCFF643CGH, ENCFF971GFY 4147990101 ENCODE Processing Pipeline 046911249664b44f9343e80f39aecb0d https://www.encodeproject.org/files/ENCFF682PSU/@@download/ENCFF682PSU.bam GRCh38 released low read depth experiment not submitted to GEO partially characterized antibody ENCFF203AWB bigWig signal p-value ENCSR621ATC ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF184-human ENCAB952VOF DNA False 2018-01-26 ENCODE 1 ENCFF657ZIF, ENCFF910IKB 945379180 ENCODE Processing Pipeline 82b404609486918eec2a52b9adc93c37 https://www.encodeproject.org/files/ENCFF203AWB/@@download/ENCFF203AWB.bigWig GRCh38 released low read depth experiment not submitted to GEO partially characterized antibody ENCFF309NCS bigWig signal p-value ENCSR621ATC ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF184-human ENCAB952VOF DNA False 2018-01-26 ENCODE 2 ENCFF227IZS, ENCFF682PSU 974285673 ENCODE Processing Pipeline 1330116146f21f10d4678faf9aa9dab7 https://www.encodeproject.org/files/ENCFF309NCS/@@download/ENCFF309NCS.bigWig GRCh38 released low read depth experiment not submitted to GEO partially characterized antibody ENCFF350LAJ bigWig signal p-value ENCSR621ATC ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF184-human ENCAB952VOF DNA False 2018-01-26 ENCODE 1, 2 ENCFF227IZS, ENCFF657ZIF, ENCFF682PSU, ENCFF910IKB 1930160217 ENCODE Processing Pipeline 5cbe4ce2b17dcb7d14cbe83dfebfedc1 https://www.encodeproject.org/files/ENCFF350LAJ/@@download/ENCFF350LAJ.bigWig GRCh38 released low read depth experiment not submitted to GEO partially characterized antibody ENCFF323TVN bigWig fold change over control ENCSR621ATC ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF184-human ENCAB952VOF DNA False 2018-01-26 ENCODE 1 ENCFF657ZIF, ENCFF910IKB 1072516476 ENCODE Processing Pipeline 69a206296af48915489f3ff09df6a723 https://www.encodeproject.org/files/ENCFF323TVN/@@download/ENCFF323TVN.bigWig GRCh38 released low read depth experiment not submitted to GEO partially characterized antibody ENCFF844FJJ bigWig fold change over control ENCSR621ATC ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF184-human ENCAB952VOF DNA False 2018-01-26 ENCODE 2 ENCFF227IZS, ENCFF682PSU 1137044304 ENCODE Processing Pipeline 8895d31a451d1115a4b685cd8596162a https://www.encodeproject.org/files/ENCFF844FJJ/@@download/ENCFF844FJJ.bigWig GRCh38 released low read depth experiment not submitted to GEO partially characterized antibody ENCFF540DKX bigWig fold change over control ENCSR621ATC ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF184-human ENCAB952VOF DNA False 2018-01-26 ENCODE 1, 2 ENCFF227IZS, ENCFF657ZIF, ENCFF682PSU, ENCFF910IKB 2037967961 ENCODE Processing Pipeline cd24d96c65d39594ee59d90ab39e4686 https://www.encodeproject.org/files/ENCFF540DKX/@@download/ENCFF540DKX.bigWig GRCh38 released low read depth experiment not submitted to GEO partially characterized antibody ENCFF800QXL bed narrowPeak peaks ENCSR621ATC ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF184-human ENCAB952VOF DNA False 2018-01-26 ENCODE 1 ENCFF657ZIF, ENCFF910IKB 6593377 ENCODE Processing Pipeline 0671b78525a692ec837c080ffc512d9a https://www.encodeproject.org/files/ENCFF800QXL/@@download/ENCFF800QXL.bed.gz GRCh38 released low read depth experiment not submitted to GEO partially characterized antibody ENCFF058OAF bed narrowPeak peaks ENCSR621ATC ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF184-human ENCAB952VOF DNA False 2018-01-26 ENCODE 2 ENCFF227IZS, ENCFF682PSU 6858131 ENCODE Processing Pipeline eee28b8b0fc5455894fef4488541efc8 https://www.encodeproject.org/files/ENCFF058OAF/@@download/ENCFF058OAF.bed.gz GRCh38 released low read depth experiment not submitted to GEO partially characterized antibody ENCFF072ZBZ bed narrowPeak peaks ENCSR621ATC ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF184-human ENCAB952VOF DNA False 2018-01-26 ENCODE 1, 2 ENCFF227IZS, ENCFF657ZIF, ENCFF682PSU, ENCFF910IKB 7220104 ENCODE Processing Pipeline d1edcf9c0fbfc8e46b43c1c3a48a5c19 https://www.encodeproject.org/files/ENCFF072ZBZ/@@download/ENCFF072ZBZ.bed.gz GRCh38 released low read depth experiment not submitted to GEO partially characterized antibody ENCFF069EMD bigBed narrowPeak peaks ENCSR621ATC ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF184-human ENCAB952VOF DNA False 2018-01-26 ENCODE 1 ENCFF800QXL 13240899 ENCODE Processing Pipeline 1cb5ab404333cbf6081eeb594bc453ab https://www.encodeproject.org/files/ENCFF069EMD/@@download/ENCFF069EMD.bigBed GRCh38 released low read depth experiment not submitted to GEO partially characterized antibody ENCFF695VXO bigBed narrowPeak peaks ENCSR621ATC ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF184-human ENCAB952VOF DNA False 2018-01-26 ENCODE 2 ENCFF058OAF 13087643 ENCODE Processing Pipeline a61e353b2e18d7e742c76389c43123bb https://www.encodeproject.org/files/ENCFF695VXO/@@download/ENCFF695VXO.bigBed GRCh38 released low read depth experiment not submitted to GEO partially characterized antibody ENCFF156QRR bigBed narrowPeak peaks ENCSR621ATC ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF184-human ENCAB952VOF DNA False 2018-01-26 ENCODE 1, 2 ENCFF072ZBZ 12978936 ENCODE Processing Pipeline 9c03404af0cae99267b8857b11639c11 https://www.encodeproject.org/files/ENCFF156QRR/@@download/ENCFF156QRR.bigBed GRCh38 released low read depth experiment not submitted to GEO partially characterized antibody ENCFF046NMM bed narrowPeak conservative idr thresholded peaks ENCSR621ATC ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF184-human ENCAB952VOF DNA False 2018-01-26 ENCODE 1, 2 ENCFF058OAF, ENCFF072ZBZ, ENCFF419RSJ, ENCFF800QXL 189658 ENCODE Processing Pipeline dd8d574b1bc2a5975bd48f26232aa2fb https://www.encodeproject.org/files/ENCFF046NMM/@@download/ENCFF046NMM.bed.gz GRCh38 released low read depth experiment not submitted to GEO partially characterized antibody ENCFF849WUT bigBed narrowPeak conservative idr thresholded peaks ENCSR621ATC ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF184-human ENCAB952VOF DNA False 2018-01-26 ENCODE 1, 2 ENCFF046NMM 393511 ENCODE Processing Pipeline a1e0dfa3c21f4dbd42080315db1dcae8 https://www.encodeproject.org/files/ENCFF849WUT/@@download/ENCFF849WUT.bigBed GRCh38 released low read depth experiment not submitted to GEO partially characterized antibody ENCFF760EPB bed narrowPeak optimal idr thresholded peaks ENCSR621ATC ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF184-human ENCAB952VOF DNA False 2018-01-26 ENCODE 1, 2 ENCFF058OAF, ENCFF072ZBZ, ENCFF419RSJ, ENCFF800QXL 254161 ENCODE Processing Pipeline 2dfcc0dbcc16a66ad3c37f4ccea080eb https://www.encodeproject.org/files/ENCFF760EPB/@@download/ENCFF760EPB.bed.gz GRCh38 released low read depth experiment not submitted to GEO partially characterized antibody ENCFF618BPL bigBed narrowPeak optimal idr thresholded peaks ENCSR621ATC ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF184-human ENCAB952VOF DNA False 2018-01-26 ENCODE 1, 2 ENCFF760EPB 591008 ENCODE Processing Pipeline 4c7cd6091ae8d0ef08036943afa56f28 https://www.encodeproject.org/files/ENCFF618BPL/@@download/ENCFF618BPL.bigBed GRCh38 released low read depth experiment not submitted to GEO partially characterized antibody ENCFF014LRW bam unfiltered alignments ENCSR011PEI ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF175-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 50 ENCFF282GDI, ENCFF316FIQ, ENCFF807MUK 1158743249 ENCODE Processing Pipeline d7facd705a5d6ed4cf05ad6454f1a0eb https://www.encodeproject.org/files/ENCFF014LRW/@@download/ENCFF014LRW.bam hg19 released control low read depth, missing genetic modification characterization, low read depth, mild to moderate bottlenecking ENCFF118ZAZ bam unfiltered alignments ENCSR011PEI ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF175-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 50 ENCFF740WEF, ENCFF807MUK, ENCFF959EDS 1026979845 ENCODE Processing Pipeline 0bc9bc95d8dad2f33c91c2083bbdb9bc https://www.encodeproject.org/files/ENCFF118ZAZ/@@download/ENCFF118ZAZ.bam hg19 released control low read depth, missing genetic modification characterization, low read depth, mild to moderate bottlenecking ENCFF959EDS fastq reads ENCSR011PEI ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF175-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 1 50 single-ended 596522882 Kevin White, UChicago 71f8811bfdcdf606d853b28a6b9a39d9 SRA:SRR6212935 https://www.encodeproject.org/files/ENCFF959EDS/@@download/ENCFF959EDS.fastq.gz Illumina HiSeq 2000 /files/ENCFF728HNA/ released control low read depth, missing genetic modification characterization, low read depth, mild to moderate bottlenecking ENCFF282GDI fastq reads ENCSR011PEI ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF175-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 1 50 single-ended 525477204 Kevin White, UChicago 8c6e12559256a43fe1d7fca698227467 SRA:SRR6212933 https://www.encodeproject.org/files/ENCFF282GDI/@@download/ENCFF282GDI.fastq.gz Illumina HiSeq 2000 /files/ENCFF728HNA/ released control low read depth, missing genetic modification characterization, low read depth, mild to moderate bottlenecking ENCFF316FIQ fastq reads ENCSR011PEI ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF175-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 1 50 single-ended 544224692 Kevin White, UChicago 4fdd39114e7555ea4d5fde2c5fd3ad2d SRA:SRR6212934 https://www.encodeproject.org/files/ENCFF316FIQ/@@download/ENCFF316FIQ.fastq.gz Illumina HiSeq 2500 /files/ENCFF728HNA/ released control low read depth, missing genetic modification characterization, low read depth, mild to moderate bottlenecking ENCFF740WEF fastq reads ENCSR011PEI ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF175-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 1 50 single-ended 435465272 Kevin White, UChicago 39c4c8b7bdd02242f20fbb236d3032e3 SRA:SRR6212936 https://www.encodeproject.org/files/ENCFF740WEF/@@download/ENCFF740WEF.fastq.gz Illumina HiSeq 2500 /files/ENCFF728HNA/ released control low read depth, missing genetic modification characterization, low read depth, mild to moderate bottlenecking ENCFF775KLX bam alignments ENCSR011PEI ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF175-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 50 ENCFF740WEF, ENCFF807MUK, ENCFF959EDS 636313870 ENCODE Processing Pipeline 5a1a33011b9c6644d347c3183b597cf9 https://www.encodeproject.org/files/ENCFF775KLX/@@download/ENCFF775KLX.bam hg19 released control low read depth, missing genetic modification characterization, low read depth, mild to moderate bottlenecking ENCFF538HUN bam alignments ENCSR011PEI ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF175-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 50 ENCFF282GDI, ENCFF316FIQ, ENCFF807MUK 899146656 ENCODE Processing Pipeline 22e983fc8763463455df870e9cd8d775 https://www.encodeproject.org/files/ENCFF538HUN/@@download/ENCFF538HUN.bam hg19 released control low read depth, missing genetic modification characterization, low read depth, mild to moderate bottlenecking ENCFF749WZX bigWig signal p-value ENCSR011PEI ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF175-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF243GPO, ENCFF775KLX 359353746 ENCODE Processing Pipeline 813fe84cc8666c2cf522ff40055df45d https://www.encodeproject.org/files/ENCFF749WZX/@@download/ENCFF749WZX.bigWig hg19 released control low read depth, missing genetic modification characterization, low read depth, mild to moderate bottlenecking ENCFF953QUA bigWig fold change over control ENCSR011PEI ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF175-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF243GPO, ENCFF775KLX 327113773 ENCODE Processing Pipeline 741bf91eee816bd7a5dc0569cae853c9 https://www.encodeproject.org/files/ENCFF953QUA/@@download/ENCFF953QUA.bigWig hg19 released control low read depth, missing genetic modification characterization, low read depth, mild to moderate bottlenecking ENCFF140PKT bam unfiltered alignments ENCSR011PEI ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF175-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 50 ENCFF643CGH, ENCFF740WEF, ENCFF959EDS 1029493393 ENCODE Processing Pipeline bcee91c6e513e4c9c56b82ee534c18a3 https://www.encodeproject.org/files/ENCFF140PKT/@@download/ENCFF140PKT.bam GRCh38 released control low read depth, missing genetic modification characterization, low read depth, mild to moderate bottlenecking ENCFF540VVE bam alignments ENCSR011PEI ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF175-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 50 ENCFF643CGH, ENCFF740WEF, ENCFF959EDS 635800967 ENCODE Processing Pipeline bd9dbc61d9f62897d2ba0f9feb5ca215 https://www.encodeproject.org/files/ENCFF540VVE/@@download/ENCFF540VVE.bam GRCh38 released control low read depth, missing genetic modification characterization, low read depth, mild to moderate bottlenecking ENCFF933PCZ bam unfiltered alignments ENCSR011PEI ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF175-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 50 ENCFF282GDI, ENCFF316FIQ, ENCFF643CGH 1162434859 ENCODE Processing Pipeline ddfec223876cf1b083f034a5f3cc0bf3 https://www.encodeproject.org/files/ENCFF933PCZ/@@download/ENCFF933PCZ.bam GRCh38 released control low read depth, missing genetic modification characterization, low read depth, mild to moderate bottlenecking ENCFF503IYW bam alignments ENCSR011PEI ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF175-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 50 ENCFF282GDI, ENCFF316FIQ, ENCFF643CGH 898475923 ENCODE Processing Pipeline 8d2b190c999dbd96ab7f3f04c23f0cf6 https://www.encodeproject.org/files/ENCFF503IYW/@@download/ENCFF503IYW.bam GRCh38 released control low read depth, missing genetic modification characterization, low read depth, mild to moderate bottlenecking ENCFF778XTB bigWig signal p-value ENCSR011PEI ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF175-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF156EWJ, ENCFF503IYW, ENCFF540VVE 431874889 ENCODE Processing Pipeline 25c7992c079e825298c43e2f09565818 https://www.encodeproject.org/files/ENCFF778XTB/@@download/ENCFF778XTB.bigWig GRCh38 released control low read depth, missing genetic modification characterization, low read depth, mild to moderate bottlenecking ENCFF327FZU bigWig fold change over control ENCSR011PEI ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF175-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF156EWJ, ENCFF540VVE 328330350 ENCODE Processing Pipeline 0629e08bcc95a7225fcce099dfdc4faa https://www.encodeproject.org/files/ENCFF327FZU/@@download/ENCFF327FZU.bigWig GRCh38 released control low read depth, missing genetic modification characterization, low read depth, mild to moderate bottlenecking ENCFF346MTL bigWig signal p-value ENCSR011PEI ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF175-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF156EWJ, ENCFF540VVE 355487813 ENCODE Processing Pipeline 948006a8e73af284ddc4f51c25966c6c https://www.encodeproject.org/files/ENCFF346MTL/@@download/ENCFF346MTL.bigWig GRCh38 released control low read depth, missing genetic modification characterization, low read depth, mild to moderate bottlenecking ENCFF305POE bigWig signal p-value ENCSR011PEI ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF175-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF156EWJ, ENCFF503IYW 414669998 ENCODE Processing Pipeline c158bf66804e1db64d15aec89ea9898d https://www.encodeproject.org/files/ENCFF305POE/@@download/ENCFF305POE.bigWig GRCh38 released control low read depth, missing genetic modification characterization, low read depth, mild to moderate bottlenecking ENCFF913YGS bigWig fold change over control ENCSR011PEI ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF175-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF156EWJ, ENCFF503IYW 406457517 ENCODE Processing Pipeline 9529c19e48d97f548d081af24f330c80 https://www.encodeproject.org/files/ENCFF913YGS/@@download/ENCFF913YGS.bigWig GRCh38 released control low read depth, missing genetic modification characterization, low read depth, mild to moderate bottlenecking ENCFF579ALH bigWig fold change over control ENCSR011PEI ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF175-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF156EWJ, ENCFF503IYW, ENCFF540VVE 600638587 ENCODE Processing Pipeline 4222807d41dd61979f3b5bdd1fe353b0 https://www.encodeproject.org/files/ENCFF579ALH/@@download/ENCFF579ALH.bigWig GRCh38 released control low read depth, missing genetic modification characterization, low read depth, mild to moderate bottlenecking ENCFF720GTN bed narrowPeak peaks ENCSR011PEI ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF175-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF156EWJ, ENCFF503IYW 6297985 ENCODE Processing Pipeline 8a69653d8232fb391d7e70b377170e74 https://www.encodeproject.org/files/ENCFF720GTN/@@download/ENCFF720GTN.bed.gz GRCh38 released control low read depth, missing genetic modification characterization, low read depth, mild to moderate bottlenecking ENCFF319SLL bigBed narrowPeak peaks ENCSR011PEI ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF175-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF720GTN 12865310 ENCODE Processing Pipeline e702c77506c1e682adbff136e7d039bb https://www.encodeproject.org/files/ENCFF319SLL/@@download/ENCFF319SLL.bigBed GRCh38 released control low read depth, missing genetic modification characterization, low read depth, mild to moderate bottlenecking ENCFF931JER bigBed narrowPeak peaks ENCSR011PEI ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF175-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF409VRO 12762259 ENCODE Processing Pipeline 6f1105d047850c8be2afd1d9441a7c87 https://www.encodeproject.org/files/ENCFF931JER/@@download/ENCFF931JER.bigBed GRCh38 released control low read depth, missing genetic modification characterization, low read depth, mild to moderate bottlenecking ENCFF514EQE bigBed narrowPeak peaks ENCSR011PEI ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF175-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF544LQA 12841475 ENCODE Processing Pipeline a286499a082be4701e9d724a85844b9d https://www.encodeproject.org/files/ENCFF514EQE/@@download/ENCFF514EQE.bigBed GRCh38 released control low read depth, missing genetic modification characterization, low read depth, mild to moderate bottlenecking ENCFF409VRO bed narrowPeak peaks ENCSR011PEI ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF175-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF156EWJ, ENCFF540VVE 5976723 ENCODE Processing Pipeline b3c74e0b2d91ec162784edba77f5fca4 https://www.encodeproject.org/files/ENCFF409VRO/@@download/ENCFF409VRO.bed.gz GRCh38 released control low read depth, missing genetic modification characterization, low read depth, mild to moderate bottlenecking ENCFF544LQA bed narrowPeak peaks ENCSR011PEI ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF175-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF156EWJ, ENCFF503IYW, ENCFF540VVE 6670094 ENCODE Processing Pipeline 770addb39913f64e89f2ae9ffac3b2c1 https://www.encodeproject.org/files/ENCFF544LQA/@@download/ENCFF544LQA.bed.gz GRCh38 released control low read depth, missing genetic modification characterization, low read depth, mild to moderate bottlenecking ENCFF247ULP bed narrowPeak optimal idr thresholded peaks ENCSR011PEI ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF175-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF409VRO, ENCFF419RSJ, ENCFF544LQA, ENCFF720GTN 339930 ENCODE Processing Pipeline eabb60aab577cde931169e93d976d842 https://www.encodeproject.org/files/ENCFF247ULP/@@download/ENCFF247ULP.bed.gz GRCh38 released control low read depth, missing genetic modification characterization, low read depth, mild to moderate bottlenecking ENCFF259CAT bigBed narrowPeak optimal idr thresholded peaks ENCSR011PEI ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF175-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF247ULP 770403 ENCODE Processing Pipeline 0c67a1d9499beaa4df7be9138605b4d6 https://www.encodeproject.org/files/ENCFF259CAT/@@download/ENCFF259CAT.bigBed GRCh38 released control low read depth, missing genetic modification characterization, low read depth, mild to moderate bottlenecking ENCFF815LBC bigWig signal p-value ENCSR011PEI ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF175-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF243GPO, ENCFF538HUN 417147892 ENCODE Processing Pipeline 634b803378a601a314454ec2786d0d5a https://www.encodeproject.org/files/ENCFF815LBC/@@download/ENCFF815LBC.bigWig hg19 released control low read depth, missing genetic modification characterization, low read depth, mild to moderate bottlenecking ENCFF680DUV bigWig signal p-value ENCSR011PEI ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF175-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF243GPO, ENCFF538HUN, ENCFF775KLX 438271046 ENCODE Processing Pipeline 656089b08e1dc2d737a234e6bbd5da7c https://www.encodeproject.org/files/ENCFF680DUV/@@download/ENCFF680DUV.bigWig hg19 released control low read depth, missing genetic modification characterization, low read depth, mild to moderate bottlenecking ENCFF563MER bigWig fold change over control ENCSR011PEI ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF175-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF243GPO, ENCFF538HUN 409417064 ENCODE Processing Pipeline 5a19cbb585e94976b1a3c630bceb1e88 https://www.encodeproject.org/files/ENCFF563MER/@@download/ENCFF563MER.bigWig hg19 released control low read depth, missing genetic modification characterization, low read depth, mild to moderate bottlenecking ENCFF869FIE bigWig fold change over control ENCSR011PEI ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF175-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF243GPO, ENCFF538HUN, ENCFF775KLX 602087952 ENCODE Processing Pipeline f86153f5f2d2a15b0a503d747336f52f https://www.encodeproject.org/files/ENCFF869FIE/@@download/ENCFF869FIE.bigWig hg19 released control low read depth, missing genetic modification characterization, low read depth, mild to moderate bottlenecking ENCFF472SCD bed narrowPeak peaks ENCSR011PEI ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF175-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF243GPO, ENCFF538HUN 6005884 ENCODE Processing Pipeline 2bab94bc6306c9d1f5743617b8c62493 https://www.encodeproject.org/files/ENCFF472SCD/@@download/ENCFF472SCD.bed.gz hg19 released control low read depth, missing genetic modification characterization, low read depth, mild to moderate bottlenecking ENCFF260RNL bed narrowPeak peaks ENCSR011PEI ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF175-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF243GPO, ENCFF775KLX 6032960 ENCODE Processing Pipeline f8148af9c2ae9084fb7a592c87363903 https://www.encodeproject.org/files/ENCFF260RNL/@@download/ENCFF260RNL.bed.gz hg19 released control low read depth, missing genetic modification characterization, low read depth, mild to moderate bottlenecking ENCFF729YPN bigBed narrowPeak optimal idr thresholded peaks ENCSR011PEI ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF175-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF721LDD 783718 ENCODE Processing Pipeline 3f4622342bf69b8088291071698527fa https://www.encodeproject.org/files/ENCFF729YPN/@@download/ENCFF729YPN.bigBed hg19 released control low read depth, missing genetic modification characterization, low read depth, mild to moderate bottlenecking ENCFF895ZYF bigBed narrowPeak peaks ENCSR011PEI ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF175-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF260RNL 12759810 ENCODE Processing Pipeline 0e10bffe744399a590e7f7a83829978b https://www.encodeproject.org/files/ENCFF895ZYF/@@download/ENCFF895ZYF.bigBed hg19 released control low read depth, missing genetic modification characterization, low read depth, mild to moderate bottlenecking ENCFF221XVT bigBed narrowPeak peaks ENCSR011PEI ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF175-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF195EMK 12830683 ENCODE Processing Pipeline 4f3e58c141222e24007da53fbe1d4473 https://www.encodeproject.org/files/ENCFF221XVT/@@download/ENCFF221XVT.bigBed hg19 released control low read depth, missing genetic modification characterization, low read depth, mild to moderate bottlenecking ENCFF721LDD bed narrowPeak optimal idr thresholded peaks ENCSR011PEI ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF175-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF001TDO, ENCFF195EMK, ENCFF260RNL, ENCFF472SCD 349948 ENCODE Processing Pipeline ce3af08120a96fe3dd29ae6b4b209bae https://www.encodeproject.org/files/ENCFF721LDD/@@download/ENCFF721LDD.bed.gz hg19 released control low read depth, missing genetic modification characterization, low read depth, mild to moderate bottlenecking ENCFF195EMK bed narrowPeak peaks ENCSR011PEI ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF175-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF243GPO, ENCFF538HUN, ENCFF775KLX 6703095 ENCODE Processing Pipeline 585759a6549be2f387282f46e4840c70 https://www.encodeproject.org/files/ENCFF195EMK/@@download/ENCFF195EMK.bed.gz hg19 released control low read depth, missing genetic modification characterization, low read depth, mild to moderate bottlenecking ENCFF800VLX bigBed narrowPeak conservative idr thresholded peaks ENCSR011PEI ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF175-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF197LEN 766466 ENCODE Processing Pipeline 05eb6dc25ccdfc1833490b489bb0256e https://www.encodeproject.org/files/ENCFF800VLX/@@download/ENCFF800VLX.bigBed hg19 released control low read depth, missing genetic modification characterization, low read depth, mild to moderate bottlenecking ENCFF838ECV bigBed narrowPeak peaks ENCSR011PEI ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF175-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF472SCD 12791708 ENCODE Processing Pipeline 5f77992f3c65006c01cde42911dc12f3 https://www.encodeproject.org/files/ENCFF838ECV/@@download/ENCFF838ECV.bigBed hg19 released control low read depth, missing genetic modification characterization, low read depth, mild to moderate bottlenecking ENCFF197LEN bed narrowPeak conservative idr thresholded peaks ENCSR011PEI ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF175-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF001TDO, ENCFF195EMK, ENCFF260RNL, ENCFF472SCD 339648 ENCODE Processing Pipeline 624b9ac0430f98821d11e93a624f1483 https://www.encodeproject.org/files/ENCFF197LEN/@@download/ENCFF197LEN.bed.gz hg19 released control low read depth, missing genetic modification characterization, low read depth, mild to moderate bottlenecking ENCFF735ORA bam unfiltered alignments ENCSR175SZH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZSCAN29-human ENCAB552CAO DNA False 2016-10-31 ENCODE 2 100 ENCFF025FSC, ENCFF368UTN, ENCFF807MUK 4338705891 ENCODE Processing Pipeline c8ea2fd526bf51a6449c31a36078e28e https://www.encodeproject.org/files/ENCFF735ORA/@@download/ENCFF735ORA.bam hg19 released low read depth ENCFF875AHR bam unfiltered alignments ENCSR175SZH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZSCAN29-human ENCAB552CAO DNA False 2016-10-31 ENCODE 1 100 ENCFF807MUK, ENCFF846BUV, ENCFF959OBE 4256701455 ENCODE Processing Pipeline a14a4f123bcb3acf63906ec6c9953373 https://www.encodeproject.org/files/ENCFF875AHR/@@download/ENCFF875AHR.bam hg19 released low read depth ENCFF959OBE fastq reads ENCSR175SZH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZSCAN29-human ENCAB552CAO DNA False 2016-10-31 ENCODE 1 1 100 paired-ended 1 ENCFF846BUV 1902486672 Michael Snyder, Stanford f0cbb595cb4a7afa71885d12a2e9c560 SRA:SRR5111220 https://www.encodeproject.org/files/ENCFF959OBE/@@download/ENCFF959OBE.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFF/ released low read depth ENCFF846BUV fastq reads ENCSR175SZH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZSCAN29-human ENCAB552CAO DNA False 2016-10-31 ENCODE 1 1 100 paired-ended 2 ENCFF959OBE 1951179208 Michael Snyder, Stanford 61ff0400cc4b232197d255e48e3dc069 SRA:SRR5111220 https://www.encodeproject.org/files/ENCFF846BUV/@@download/ENCFF846BUV.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFH/ released low read depth ENCFF025FSC fastq reads ENCSR175SZH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZSCAN29-human ENCAB552CAO DNA False 2016-10-31 ENCODE 2 1 100 paired-ended 2 ENCFF368UTN 2015177046 Michael Snyder, Stanford a62db6b75cc2d07bda173f3e635c7def SRA:SRR5111221 https://www.encodeproject.org/files/ENCFF025FSC/@@download/ENCFF025FSC.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFA/ released low read depth ENCFF368UTN fastq reads ENCSR175SZH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZSCAN29-human ENCAB552CAO DNA False 2016-10-31 ENCODE 2 1 100 paired-ended 1 ENCFF025FSC 1971438642 Michael Snyder, Stanford c62d94961ca5e88fffc70c346fd382cf SRA:SRR5111221 https://www.encodeproject.org/files/ENCFF368UTN/@@download/ENCFF368UTN.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFD/ released low read depth ENCFF889BVE bam alignments ENCSR175SZH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZSCAN29-human ENCAB552CAO DNA False 2016-10-31 ENCODE 2 100 ENCFF025FSC, ENCFF368UTN, ENCFF807MUK 3578347291 ENCODE Processing Pipeline 2ee2af2989e2607dba93c20650452757 https://www.encodeproject.org/files/ENCFF889BVE/@@download/ENCFF889BVE.bam hg19 released low read depth ENCFF361VCB bam alignments ENCSR175SZH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZSCAN29-human ENCAB552CAO DNA False 2016-10-31 ENCODE 1 100 ENCFF807MUK, ENCFF846BUV, ENCFF959OBE 3535257082 ENCODE Processing Pipeline 906aa223b2e605e0fc576b1df4d616bb https://www.encodeproject.org/files/ENCFF361VCB/@@download/ENCFF361VCB.bam hg19 released low read depth ENCFF763IOR bigWig signal p-value ENCSR175SZH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZSCAN29-human ENCAB552CAO DNA False 2016-10-31 ENCODE 1 ENCFF361VCB, ENCFF581ZJL 944982099 ENCODE Processing Pipeline 3f294b5eba644b75990900f81356eebb https://www.encodeproject.org/files/ENCFF763IOR/@@download/ENCFF763IOR.bigWig hg19 released low read depth ENCFF286JQI bigWig signal p-value ENCSR175SZH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZSCAN29-human ENCAB552CAO DNA False 2016-10-31 ENCODE 2 ENCFF051LWI, ENCFF889BVE 907096776 ENCODE Processing Pipeline 20fcf8918b5bc951a2c72dd088cc19ef https://www.encodeproject.org/files/ENCFF286JQI/@@download/ENCFF286JQI.bigWig hg19 released low read depth ENCFF427EOD bigWig signal p-value ENCSR175SZH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZSCAN29-human ENCAB552CAO DNA False 2016-10-31 ENCODE 1, 2 ENCFF051LWI, ENCFF361VCB, ENCFF581ZJL, ENCFF889BVE 1750706206 ENCODE Processing Pipeline c95d750c93e5109e4ff934d4abf52621 https://www.encodeproject.org/files/ENCFF427EOD/@@download/ENCFF427EOD.bigWig hg19 released low read depth ENCFF002XRW bigWig fold change over control ENCSR175SZH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZSCAN29-human ENCAB552CAO DNA False 2016-10-31 ENCODE 1 ENCFF361VCB, ENCFF581ZJL 1083540336 ENCODE Processing Pipeline 89dc9f6747058e54feba4285688ced7e https://www.encodeproject.org/files/ENCFF002XRW/@@download/ENCFF002XRW.bigWig hg19 released low read depth ENCFF802BZJ bigWig fold change over control ENCSR175SZH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZSCAN29-human ENCAB552CAO DNA False 2016-10-31 ENCODE 2 ENCFF051LWI, ENCFF889BVE 1038832293 ENCODE Processing Pipeline 28321e3d39322716b83f695613b97223 https://www.encodeproject.org/files/ENCFF802BZJ/@@download/ENCFF802BZJ.bigWig hg19 released low read depth ENCFF935GAH bigWig fold change over control ENCSR175SZH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZSCAN29-human ENCAB552CAO DNA False 2016-10-31 ENCODE 1, 2 ENCFF051LWI, ENCFF361VCB, ENCFF581ZJL, ENCFF889BVE 1969438088 ENCODE Processing Pipeline 83494925f0d502647d0084122e9dc989 https://www.encodeproject.org/files/ENCFF935GAH/@@download/ENCFF935GAH.bigWig hg19 released low read depth ENCFF483NEI bed narrowPeak peaks ENCSR175SZH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZSCAN29-human ENCAB552CAO DNA False 2016-10-31 ENCODE 1 ENCFF361VCB, ENCFF581ZJL 6513282 ENCODE Processing Pipeline c770544017dc29caa52a24fae3ce7366 https://www.encodeproject.org/files/ENCFF483NEI/@@download/ENCFF483NEI.bed.gz hg19 released low read depth ENCFF546OLH bigBed narrowPeak peaks ENCSR175SZH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZSCAN29-human ENCAB552CAO DNA False 2016-10-31 ENCODE 1, 2 ENCFF788QDP 13203359 ENCODE Processing Pipeline 9a8816e4cc77fa231012fc003a0dd46e https://www.encodeproject.org/files/ENCFF546OLH/@@download/ENCFF546OLH.bigBed hg19 released low read depth ENCFF118YQO bed narrowPeak peaks ENCSR175SZH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZSCAN29-human ENCAB552CAO DNA False 2016-10-31 ENCODE 2 ENCFF051LWI, ENCFF889BVE 6858994 ENCODE Processing Pipeline 7763099fa0d7ef87e37db04101e1b836 https://www.encodeproject.org/files/ENCFF118YQO/@@download/ENCFF118YQO.bed.gz hg19 released low read depth ENCFF496FNH bed narrowPeak conservative idr thresholded peaks ENCSR175SZH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZSCAN29-human ENCAB552CAO DNA False 2016-10-31 ENCODE 1, 2 ENCFF001TDO, ENCFF118YQO, ENCFF483NEI, ENCFF788QDP 232861 ENCODE Processing Pipeline f2edbc5020a623c3ea937596f67b847d https://www.encodeproject.org/files/ENCFF496FNH/@@download/ENCFF496FNH.bed.gz hg19 released low read depth ENCFF253NXR bed narrowPeak optimal idr thresholded peaks ENCSR175SZH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZSCAN29-human ENCAB552CAO DNA False 2016-10-31 ENCODE 1, 2 ENCFF001TDO, ENCFF118YQO, ENCFF483NEI, ENCFF788QDP 323129 ENCODE Processing Pipeline ce16e91b56c848b604565d6e0c378f09 https://www.encodeproject.org/files/ENCFF253NXR/@@download/ENCFF253NXR.bed.gz hg19 released low read depth ENCFF243UIW bigBed narrowPeak optimal idr thresholded peaks ENCSR175SZH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZSCAN29-human ENCAB552CAO DNA False 2016-10-31 ENCODE 1, 2 ENCFF253NXR 690468 ENCODE Processing Pipeline 127493dc3718f801c91cb9c1cac5eb03 https://www.encodeproject.org/files/ENCFF243UIW/@@download/ENCFF243UIW.bigBed hg19 released low read depth ENCFF788QDP bed narrowPeak peaks ENCSR175SZH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZSCAN29-human ENCAB552CAO DNA False 2016-10-31 ENCODE 1, 2 ENCFF051LWI, ENCFF361VCB, ENCFF581ZJL, ENCFF889BVE 7227272 ENCODE Processing Pipeline 03a6c1c79824a0d64677b31384f15103 https://www.encodeproject.org/files/ENCFF788QDP/@@download/ENCFF788QDP.bed.gz hg19 released low read depth ENCFF205DLS bigBed narrowPeak peaks ENCSR175SZH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZSCAN29-human ENCAB552CAO DNA False 2016-10-31 ENCODE 1 ENCFF483NEI 13421177 ENCODE Processing Pipeline 612e4f966cac28a500712ff4ced65b2b https://www.encodeproject.org/files/ENCFF205DLS/@@download/ENCFF205DLS.bigBed hg19 released low read depth ENCFF728PSA bigBed narrowPeak peaks ENCSR175SZH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZSCAN29-human ENCAB552CAO DNA False 2016-10-31 ENCODE 2 ENCFF118YQO 13289028 ENCODE Processing Pipeline 1d396d5af7875e497fd37b0a62eb17ff https://www.encodeproject.org/files/ENCFF728PSA/@@download/ENCFF728PSA.bigBed hg19 released low read depth ENCFF053QEX bigBed narrowPeak conservative idr thresholded peaks ENCSR175SZH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZSCAN29-human ENCAB552CAO DNA False 2016-10-31 ENCODE 1, 2 ENCFF496FNH 544230 ENCODE Processing Pipeline f9de4a3089bfa502be29786f74e5e53c https://www.encodeproject.org/files/ENCFF053QEX/@@download/ENCFF053QEX.bigBed hg19 released low read depth ENCFF685DTH bam unfiltered alignments ENCSR175SZH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZSCAN29-human ENCAB552CAO DNA False 2016-10-31 ENCODE 2 100 ENCFF025FSC, ENCFF368UTN, ENCFF643CGH 4342923965 ENCODE Processing Pipeline 2b53ce7b96023a5830b9cebf21533e96 https://www.encodeproject.org/files/ENCFF685DTH/@@download/ENCFF685DTH.bam GRCh38 released low read depth ENCFF527NNL bam unfiltered alignments ENCSR175SZH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZSCAN29-human ENCAB552CAO DNA False 2016-10-31 ENCODE 1 100 ENCFF643CGH, ENCFF846BUV, ENCFF959OBE 4262234179 ENCODE Processing Pipeline d3b0a5533ec7cd882d5a924540d1af51 https://www.encodeproject.org/files/ENCFF527NNL/@@download/ENCFF527NNL.bam GRCh38 released low read depth ENCFF122RSM bam alignments ENCSR175SZH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZSCAN29-human ENCAB552CAO DNA False 2016-10-31 ENCODE 1 100 ENCFF643CGH, ENCFF846BUV, ENCFF959OBE 3536898643 ENCODE Processing Pipeline ec56b9a63fe9bfec9f6a94178b5d0609 https://www.encodeproject.org/files/ENCFF122RSM/@@download/ENCFF122RSM.bam GRCh38 released low read depth ENCFF450TNG bam alignments ENCSR175SZH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZSCAN29-human ENCAB552CAO DNA False 2016-10-31 ENCODE 2 100 ENCFF025FSC, ENCFF368UTN, ENCFF643CGH 3580481332 ENCODE Processing Pipeline ac68aeffc27e2d8a6308a406c8393c24 https://www.encodeproject.org/files/ENCFF450TNG/@@download/ENCFF450TNG.bam GRCh38 released low read depth ENCFF134HWX bigWig signal p-value ENCSR175SZH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZSCAN29-human ENCAB552CAO DNA False 2016-10-31 ENCODE 1 ENCFF122RSM, ENCFF910IKB 1062042707 ENCODE Processing Pipeline cad4ce41bc0c1519a3063ceb8add5621 https://www.encodeproject.org/files/ENCFF134HWX/@@download/ENCFF134HWX.bigWig GRCh38 released low read depth ENCFF646WVI bigWig signal p-value ENCSR175SZH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZSCAN29-human ENCAB552CAO DNA False 2016-10-31 ENCODE 2 ENCFF227IZS, ENCFF450TNG 1001557839 ENCODE Processing Pipeline cd1c925f08f8ced9a0dec1ad8c41b634 https://www.encodeproject.org/files/ENCFF646WVI/@@download/ENCFF646WVI.bigWig GRCh38 released low read depth ENCFF244IJZ bigWig signal p-value ENCSR175SZH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZSCAN29-human ENCAB552CAO DNA False 2016-10-31 ENCODE 1, 2 ENCFF122RSM, ENCFF227IZS, ENCFF450TNG, ENCFF910IKB 1766034564 ENCODE Processing Pipeline 0fa7357edd11f8ef470d18df76126160 https://www.encodeproject.org/files/ENCFF244IJZ/@@download/ENCFF244IJZ.bigWig GRCh38 released low read depth ENCFF316PRE bigWig fold change over control ENCSR175SZH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZSCAN29-human ENCAB552CAO DNA False 2016-10-31 ENCODE 1 ENCFF122RSM, ENCFF910IKB 1086446816 ENCODE Processing Pipeline cf91ea72b0d3d556beffd9742e9c4eb9 https://www.encodeproject.org/files/ENCFF316PRE/@@download/ENCFF316PRE.bigWig GRCh38 released low read depth ENCFF329AOV bigWig fold change over control ENCSR175SZH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZSCAN29-human ENCAB552CAO DNA False 2016-10-31 ENCODE 2 ENCFF227IZS, ENCFF450TNG 1040550318 ENCODE Processing Pipeline 56a9a2e924a0a9d00f1dcca334ff59fa https://www.encodeproject.org/files/ENCFF329AOV/@@download/ENCFF329AOV.bigWig GRCh38 released low read depth ENCFF706ZWX bigWig fold change over control ENCSR175SZH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZSCAN29-human ENCAB552CAO DNA False 2016-10-31 ENCODE 1, 2 ENCFF122RSM, ENCFF227IZS, ENCFF450TNG, ENCFF910IKB 1971042974 ENCODE Processing Pipeline 18c69dd0672c7f66d216fc0c3ea1efdb https://www.encodeproject.org/files/ENCFF706ZWX/@@download/ENCFF706ZWX.bigWig GRCh38 released low read depth ENCFF547YAA bed narrowPeak peaks ENCSR175SZH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZSCAN29-human ENCAB552CAO DNA False 2016-10-31 ENCODE 1 ENCFF122RSM, ENCFF910IKB 6375691 ENCODE Processing Pipeline 23e09b5d55164430a3beff2f17bfc46e https://www.encodeproject.org/files/ENCFF547YAA/@@download/ENCFF547YAA.bed.gz GRCh38 released low read depth ENCFF155JOD bed narrowPeak peaks ENCSR175SZH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZSCAN29-human ENCAB552CAO DNA False 2016-10-31 ENCODE 2 ENCFF227IZS, ENCFF450TNG 6758053 ENCODE Processing Pipeline ff4074cf18755b7000d86ad7e6249d41 https://www.encodeproject.org/files/ENCFF155JOD/@@download/ENCFF155JOD.bed.gz GRCh38 released low read depth ENCFF935ZVZ bigBed narrowPeak peaks ENCSR175SZH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZSCAN29-human ENCAB552CAO DNA False 2016-10-31 ENCODE 1 ENCFF547YAA 13430108 ENCODE Processing Pipeline 7842f538578cbf547b62485e2860fb00 https://www.encodeproject.org/files/ENCFF935ZVZ/@@download/ENCFF935ZVZ.bigBed GRCh38 released low read depth ENCFF804CZV bed narrowPeak peaks ENCSR175SZH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZSCAN29-human ENCAB552CAO DNA False 2016-10-31 ENCODE 1, 2 ENCFF122RSM, ENCFF227IZS, ENCFF450TNG, ENCFF910IKB 7204235 ENCODE Processing Pipeline 24799fff7c9436bae5bbe8b2d828cc26 https://www.encodeproject.org/files/ENCFF804CZV/@@download/ENCFF804CZV.bed.gz GRCh38 released low read depth ENCFF067RNH bigBed narrowPeak peaks ENCSR175SZH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZSCAN29-human ENCAB552CAO DNA False 2016-10-31 ENCODE 2 ENCFF155JOD 13298028 ENCODE Processing Pipeline 7d9a8f0786f196def33d5067365e14dc https://www.encodeproject.org/files/ENCFF067RNH/@@download/ENCFF067RNH.bigBed GRCh38 released low read depth ENCFF861SCT bigBed narrowPeak peaks ENCSR175SZH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZSCAN29-human ENCAB552CAO DNA False 2016-10-31 ENCODE 1, 2 ENCFF804CZV 13216296 ENCODE Processing Pipeline acd83bf9281fbdc045df50ffa2dbc7fd https://www.encodeproject.org/files/ENCFF861SCT/@@download/ENCFF861SCT.bigBed GRCh38 released low read depth ENCFF148GRM bed narrowPeak conservative idr thresholded peaks ENCSR175SZH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZSCAN29-human ENCAB552CAO DNA False 2016-10-31 ENCODE 1, 2 ENCFF155JOD, ENCFF419RSJ, ENCFF547YAA, ENCFF804CZV 233795 ENCODE Processing Pipeline 1dcb125f70b6baadb1ccedb1f0895941 https://www.encodeproject.org/files/ENCFF148GRM/@@download/ENCFF148GRM.bed.gz GRCh38 released low read depth ENCFF908ZLN bed narrowPeak optimal idr thresholded peaks ENCSR175SZH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZSCAN29-human ENCAB552CAO DNA False 2016-10-31 ENCODE 1, 2 ENCFF155JOD, ENCFF419RSJ, ENCFF547YAA, ENCFF804CZV 325836 ENCODE Processing Pipeline 2613b9d76c067f199852593f8ae62cfb https://www.encodeproject.org/files/ENCFF908ZLN/@@download/ENCFF908ZLN.bed.gz GRCh38 released low read depth ENCFF328FWW bigBed narrowPeak conservative idr thresholded peaks ENCSR175SZH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZSCAN29-human ENCAB552CAO DNA False 2016-10-31 ENCODE 1, 2 ENCFF148GRM 547439 ENCODE Processing Pipeline da083165b4458580b77b6bd7ad49e37f https://www.encodeproject.org/files/ENCFF328FWW/@@download/ENCFF328FWW.bigBed GRCh38 released low read depth ENCFF363FFJ bigBed narrowPeak optimal idr thresholded peaks ENCSR175SZH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZSCAN29-human ENCAB552CAO DNA False 2016-10-31 ENCODE 1, 2 ENCFF908ZLN 697281 ENCODE Processing Pipeline db433485c5bc9134942c87028a013157 https://www.encodeproject.org/files/ENCFF363FFJ/@@download/ENCFF363FFJ.bigBed GRCh38 released low read depth ENCFF987HMB bam unfiltered alignments ENCSR987PBI ChIP-seq EFO:0002067 K562 cell line Homo sapiens DNMT1-human ENCAB463LOX DNA False 2016-10-31 ENCODE 1 100 ENCFF126MZP, ENCFF553GOC, ENCFF807MUK 4632455386 ENCODE Processing Pipeline 79a7fecfcce6046531ac11ed9e717b96 https://www.encodeproject.org/files/ENCFF987HMB/@@download/ENCFF987HMB.bam hg19 released borderline replicate concordance, mild to moderate bottlenecking, antibody characterized with exemption ENCFF260TZY bam unfiltered alignments ENCSR987PBI ChIP-seq EFO:0002067 K562 cell line Homo sapiens DNMT1-human ENCAB463LOX DNA False 2016-10-31 ENCODE 2 100 ENCFF306GVI, ENCFF436CBC, ENCFF807MUK 5888202936 ENCODE Processing Pipeline f355e5cc38e99635582d1fe4918ce598 https://www.encodeproject.org/files/ENCFF260TZY/@@download/ENCFF260TZY.bam hg19 released borderline replicate concordance, mild to moderate bottlenecking, antibody characterized with exemption ENCFF436CBC fastq reads ENCSR987PBI ChIP-seq EFO:0002067 K562 cell line Homo sapiens DNMT1-human ENCAB463LOX DNA False 2016-10-31 ENCODE 2 1 100 paired-ended 1 ENCFF306GVI 2708538834 Michael Snyder, Stanford 3d9e38717e3225dc296dfeb4d5d8945a SRA:SRR5112347 https://www.encodeproject.org/files/ENCFF436CBC/@@download/ENCFF436CBC.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFD/ released borderline replicate concordance, mild to moderate bottlenecking, antibody characterized with exemption ENCFF126MZP fastq reads ENCSR987PBI ChIP-seq EFO:0002067 K562 cell line Homo sapiens DNMT1-human ENCAB463LOX DNA False 2016-10-31 ENCODE 1 1 100 paired-ended 1 ENCFF553GOC 2120559213 Michael Snyder, Stanford 3e90cb65b6e6794990e58c5f8bea95f7 SRA:SRR5112348 https://www.encodeproject.org/files/ENCFF126MZP/@@download/ENCFF126MZP.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFF/ released borderline replicate concordance, mild to moderate bottlenecking, antibody characterized with exemption ENCFF306GVI fastq reads ENCSR987PBI ChIP-seq EFO:0002067 K562 cell line Homo sapiens DNMT1-human ENCAB463LOX DNA False 2016-10-31 ENCODE 2 1 100 paired-ended 2 ENCFF436CBC 2769004405 Michael Snyder, Stanford 128dd0c060d966dd032f235dfa84ee84 SRA:SRR5112347 https://www.encodeproject.org/files/ENCFF306GVI/@@download/ENCFF306GVI.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFA/ released borderline replicate concordance, mild to moderate bottlenecking, antibody characterized with exemption ENCFF553GOC fastq reads ENCSR987PBI ChIP-seq EFO:0002067 K562 cell line Homo sapiens DNMT1-human ENCAB463LOX DNA False 2016-10-31 ENCODE 1 1 100 paired-ended 2 ENCFF126MZP 2172004465 Michael Snyder, Stanford 3e79bb7eb4aa8316b75000c575d0a73d SRA:SRR5112348 https://www.encodeproject.org/files/ENCFF553GOC/@@download/ENCFF553GOC.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFH/ released borderline replicate concordance, mild to moderate bottlenecking, antibody characterized with exemption ENCFF469DEJ bam alignments ENCSR987PBI ChIP-seq EFO:0002067 K562 cell line Homo sapiens DNMT1-human ENCAB463LOX DNA False 2016-10-31 ENCODE 1 100 ENCFF126MZP, ENCFF553GOC, ENCFF807MUK 3728138404 ENCODE Processing Pipeline fcc4848dd0fc90c7e9a0f113bca4b3d2 https://www.encodeproject.org/files/ENCFF469DEJ/@@download/ENCFF469DEJ.bam hg19 released borderline replicate concordance, mild to moderate bottlenecking, antibody characterized with exemption ENCFF745TZN bam alignments ENCSR987PBI ChIP-seq EFO:0002067 K562 cell line Homo sapiens DNMT1-human ENCAB463LOX DNA False 2016-10-31 ENCODE 2 100 ENCFF306GVI, ENCFF436CBC, ENCFF807MUK 5027181275 ENCODE Processing Pipeline 82072679efbbcb168ce196bc5168019f https://www.encodeproject.org/files/ENCFF745TZN/@@download/ENCFF745TZN.bam hg19 released borderline replicate concordance, mild to moderate bottlenecking, antibody characterized with exemption ENCFF892BSN bigWig signal p-value ENCSR987PBI ChIP-seq EFO:0002067 K562 cell line Homo sapiens DNMT1-human ENCAB463LOX DNA False 2016-10-31 ENCODE 1 ENCFF469DEJ, ENCFF581ZJL 1206515723 ENCODE Processing Pipeline 52c5f5ad4346487f18f2aa23968e5606 https://www.encodeproject.org/files/ENCFF892BSN/@@download/ENCFF892BSN.bigWig hg19 released borderline replicate concordance, mild to moderate bottlenecking, antibody characterized with exemption ENCFF868FJR bigWig signal p-value ENCSR987PBI ChIP-seq EFO:0002067 K562 cell line Homo sapiens DNMT1-human ENCAB463LOX DNA False 2016-10-31 ENCODE 2 ENCFF051LWI, ENCFF745TZN 1213155478 ENCODE Processing Pipeline 75a0d8d7f428a446099fb776ce247440 https://www.encodeproject.org/files/ENCFF868FJR/@@download/ENCFF868FJR.bigWig hg19 released borderline replicate concordance, mild to moderate bottlenecking, antibody characterized with exemption ENCFF353ZYC bigWig signal p-value ENCSR987PBI ChIP-seq EFO:0002067 K562 cell line Homo sapiens DNMT1-human ENCAB463LOX DNA False 2016-10-31 ENCODE 1, 2 ENCFF051LWI, ENCFF469DEJ, ENCFF581ZJL, ENCFF745TZN 1827436665 ENCODE Processing Pipeline fb974e885f993640c43696f614e1199c https://www.encodeproject.org/files/ENCFF353ZYC/@@download/ENCFF353ZYC.bigWig hg19 released borderline replicate concordance, mild to moderate bottlenecking, antibody characterized with exemption ENCFF564CWZ bigWig fold change over control ENCSR987PBI ChIP-seq EFO:0002067 K562 cell line Homo sapiens DNMT1-human ENCAB463LOX DNA False 2016-10-31 ENCODE 1 ENCFF469DEJ, ENCFF581ZJL 1117938168 ENCODE Processing Pipeline bfbd51cf62aec0d9af2871c26a2af9d9 https://www.encodeproject.org/files/ENCFF564CWZ/@@download/ENCFF564CWZ.bigWig hg19 released borderline replicate concordance, mild to moderate bottlenecking, antibody characterized with exemption ENCFF750ISQ bigWig fold change over control ENCSR987PBI ChIP-seq EFO:0002067 K562 cell line Homo sapiens DNMT1-human ENCAB463LOX DNA False 2016-10-31 ENCODE 2 ENCFF051LWI, ENCFF745TZN 1255026581 ENCODE Processing Pipeline ae3a4e81972d94455be5337ce0cbc570 https://www.encodeproject.org/files/ENCFF750ISQ/@@download/ENCFF750ISQ.bigWig hg19 released borderline replicate concordance, mild to moderate bottlenecking, antibody characterized with exemption ENCFF820AVX bigWig fold change over control ENCSR987PBI ChIP-seq EFO:0002067 K562 cell line Homo sapiens DNMT1-human ENCAB463LOX DNA False 2016-10-31 ENCODE 1, 2 ENCFF051LWI, ENCFF469DEJ, ENCFF581ZJL, ENCFF745TZN 2099105096 ENCODE Processing Pipeline bf0318bff573cee459d1825c5b739563 https://www.encodeproject.org/files/ENCFF820AVX/@@download/ENCFF820AVX.bigWig hg19 released borderline replicate concordance, mild to moderate bottlenecking, antibody characterized with exemption ENCFF958LLL bed narrowPeak peaks ENCSR987PBI ChIP-seq EFO:0002067 K562 cell line Homo sapiens DNMT1-human ENCAB463LOX DNA False 2016-10-31 ENCODE 1 ENCFF469DEJ, ENCFF581ZJL 6673322 ENCODE Processing Pipeline 975a07ecd07b60af1afa02f8d730bce8 https://www.encodeproject.org/files/ENCFF958LLL/@@download/ENCFF958LLL.bed.gz hg19 released borderline replicate concordance, mild to moderate bottlenecking, antibody characterized with exemption ENCFF904JFG bed narrowPeak peaks ENCSR987PBI ChIP-seq EFO:0002067 K562 cell line Homo sapiens DNMT1-human ENCAB463LOX DNA False 2016-10-31 ENCODE 2 ENCFF051LWI, ENCFF745TZN 6852614 ENCODE Processing Pipeline 500d04a0c0adb72a12ce4c535498d6d5 https://www.encodeproject.org/files/ENCFF904JFG/@@download/ENCFF904JFG.bed.gz hg19 released borderline replicate concordance, mild to moderate bottlenecking, antibody characterized with exemption ENCFF318PDI bigBed narrowPeak peaks ENCSR987PBI ChIP-seq EFO:0002067 K562 cell line Homo sapiens DNMT1-human ENCAB463LOX DNA False 2016-10-31 ENCODE 1, 2 ENCFF940ADN 12945168 ENCODE Processing Pipeline 21f6b982d75c944a4a094e5076ed63b8 https://www.encodeproject.org/files/ENCFF318PDI/@@download/ENCFF318PDI.bigBed hg19 released borderline replicate concordance, mild to moderate bottlenecking, antibody characterized with exemption ENCFF997JHM bed narrowPeak conservative idr thresholded peaks ENCSR987PBI ChIP-seq EFO:0002067 K562 cell line Homo sapiens DNMT1-human ENCAB463LOX DNA False 2016-10-31 ENCODE 1, 2 ENCFF001TDO, ENCFF904JFG, ENCFF940ADN, ENCFF958LLL 23618 ENCODE Processing Pipeline ba64babb2e03f2acfa71ad96315d06f5 https://www.encodeproject.org/files/ENCFF997JHM/@@download/ENCFF997JHM.bed.gz hg19 released borderline replicate concordance, mild to moderate bottlenecking, antibody characterized with exemption ENCFF940ADN bed narrowPeak peaks ENCSR987PBI ChIP-seq EFO:0002067 K562 cell line Homo sapiens DNMT1-human ENCAB463LOX DNA False 2016-10-31 ENCODE 1, 2 ENCFF051LWI, ENCFF469DEJ, ENCFF581ZJL, ENCFF745TZN 7229913 ENCODE Processing Pipeline 7d69edafb10a4b1d2e93dfe0429cfdff https://www.encodeproject.org/files/ENCFF940ADN/@@download/ENCFF940ADN.bed.gz hg19 released borderline replicate concordance, mild to moderate bottlenecking, antibody characterized with exemption ENCFF213GDC bigBed narrowPeak peaks ENCSR987PBI ChIP-seq EFO:0002067 K562 cell line Homo sapiens DNMT1-human ENCAB463LOX DNA False 2016-10-31 ENCODE 1 ENCFF958LLL 13212561 ENCODE Processing Pipeline 8025a42eeb5eee229b55656dd65ea092 https://www.encodeproject.org/files/ENCFF213GDC/@@download/ENCFF213GDC.bigBed hg19 released borderline replicate concordance, mild to moderate bottlenecking, antibody characterized with exemption ENCFF156SUB bigBed narrowPeak peaks ENCSR987PBI ChIP-seq EFO:0002067 K562 cell line Homo sapiens DNMT1-human ENCAB463LOX DNA False 2016-10-31 ENCODE 2 ENCFF904JFG 13072097 ENCODE Processing Pipeline 4551829da4f8bce5c63df3bf0fa49a81 https://www.encodeproject.org/files/ENCFF156SUB/@@download/ENCFF156SUB.bigBed hg19 released borderline replicate concordance, mild to moderate bottlenecking, antibody characterized with exemption ENCFF167QKF bigBed narrowPeak optimal idr thresholded peaks ENCSR987PBI ChIP-seq EFO:0002067 K562 cell line Homo sapiens DNMT1-human ENCAB463LOX DNA False 2016-10-31 ENCODE 1, 2 ENCFF034PQD 178698 ENCODE Processing Pipeline 8f103151c1ba3e09844125419ffe10f2 https://www.encodeproject.org/files/ENCFF167QKF/@@download/ENCFF167QKF.bigBed hg19 released borderline replicate concordance, mild to moderate bottlenecking, antibody characterized with exemption ENCFF712YDU bigBed narrowPeak conservative idr thresholded peaks ENCSR987PBI ChIP-seq EFO:0002067 K562 cell line Homo sapiens DNMT1-human ENCAB463LOX DNA False 2016-10-31 ENCODE 1, 2 ENCFF997JHM 102968 ENCODE Processing Pipeline c1bfce90d322390a519591f66740625d https://www.encodeproject.org/files/ENCFF712YDU/@@download/ENCFF712YDU.bigBed hg19 released borderline replicate concordance, mild to moderate bottlenecking, antibody characterized with exemption ENCFF034PQD bed narrowPeak optimal idr thresholded peaks ENCSR987PBI ChIP-seq EFO:0002067 K562 cell line Homo sapiens DNMT1-human ENCAB463LOX DNA False 2016-10-31 ENCODE 1, 2 ENCFF001TDO, ENCFF904JFG, ENCFF940ADN, ENCFF958LLL 70153 ENCODE Processing Pipeline 79eeb002c4537a9f9bcd3ee531b71688 https://www.encodeproject.org/files/ENCFF034PQD/@@download/ENCFF034PQD.bed.gz hg19 released borderline replicate concordance, mild to moderate bottlenecking, antibody characterized with exemption ENCFF022XSP bam unfiltered alignments ENCSR987PBI ChIP-seq EFO:0002067 K562 cell line Homo sapiens DNMT1-human ENCAB463LOX DNA False 2016-10-31 ENCODE 1 100 ENCFF126MZP, ENCFF553GOC, ENCFF643CGH 4635686390 ENCODE Processing Pipeline 227e72dba3a1b92d3e5764048f23aa48 https://www.encodeproject.org/files/ENCFF022XSP/@@download/ENCFF022XSP.bam GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, antibody characterized with exemption ENCFF273UPH bam unfiltered alignments ENCSR987PBI ChIP-seq EFO:0002067 K562 cell line Homo sapiens DNMT1-human ENCAB463LOX DNA False 2016-10-31 ENCODE 2 100 ENCFF306GVI, ENCFF436CBC, ENCFF643CGH 5893755335 ENCODE Processing Pipeline 47e319fb3cb590e80d4938b3a4810900 https://www.encodeproject.org/files/ENCFF273UPH/@@download/ENCFF273UPH.bam GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, antibody characterized with exemption ENCFF573OTF bam alignments ENCSR987PBI ChIP-seq EFO:0002067 K562 cell line Homo sapiens DNMT1-human ENCAB463LOX DNA False 2016-10-31 ENCODE 1 100 ENCFF126MZP, ENCFF553GOC, ENCFF643CGH 3729991042 ENCODE Processing Pipeline cb1d198c60137f2504bac43951158f02 https://www.encodeproject.org/files/ENCFF573OTF/@@download/ENCFF573OTF.bam GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, antibody characterized with exemption ENCFF378UVV bam alignments ENCSR987PBI ChIP-seq EFO:0002067 K562 cell line Homo sapiens DNMT1-human ENCAB463LOX DNA False 2016-10-31 ENCODE 2 100 ENCFF306GVI, ENCFF436CBC, ENCFF643CGH 5030046271 ENCODE Processing Pipeline dfbf508bae9c2bfb2d316a2812fc2e45 https://www.encodeproject.org/files/ENCFF378UVV/@@download/ENCFF378UVV.bam GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, antibody characterized with exemption ENCFF088OIH bigWig signal p-value ENCSR987PBI ChIP-seq EFO:0002067 K562 cell line Homo sapiens DNMT1-human ENCAB463LOX DNA False 2016-10-31 ENCODE 1 ENCFF573OTF, ENCFF910IKB 1087360940 ENCODE Processing Pipeline 05a3dff0cab67efa480c0503cce2f6fc https://www.encodeproject.org/files/ENCFF088OIH/@@download/ENCFF088OIH.bigWig GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, antibody characterized with exemption ENCFF982YJA bigWig signal p-value ENCSR987PBI ChIP-seq EFO:0002067 K562 cell line Homo sapiens DNMT1-human ENCAB463LOX DNA False 2016-10-31 ENCODE 2 ENCFF227IZS, ENCFF378UVV 1258747413 ENCODE Processing Pipeline 5d7f3f76d90768d9cc5863c390121832 https://www.encodeproject.org/files/ENCFF982YJA/@@download/ENCFF982YJA.bigWig GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, antibody characterized with exemption ENCFF935BWQ bigWig signal p-value ENCSR987PBI ChIP-seq EFO:0002067 K562 cell line Homo sapiens DNMT1-human ENCAB463LOX DNA False 2016-10-31 ENCODE 1, 2 ENCFF227IZS, ENCFF378UVV, ENCFF573OTF, ENCFF910IKB 1755862040 ENCODE Processing Pipeline e0117f28f652e10af138149c1a4ed6d9 https://www.encodeproject.org/files/ENCFF935BWQ/@@download/ENCFF935BWQ.bigWig GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, antibody characterized with exemption ENCFF469UWR bigWig fold change over control ENCSR987PBI ChIP-seq EFO:0002067 K562 cell line Homo sapiens DNMT1-human ENCAB463LOX DNA False 2016-10-31 ENCODE 1 ENCFF573OTF, ENCFF910IKB 1100839992 ENCODE Processing Pipeline 7e6ffd0388c27ab227ef9966a964a25e https://www.encodeproject.org/files/ENCFF469UWR/@@download/ENCFF469UWR.bigWig GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, antibody characterized with exemption ENCFF515GYS bigWig fold change over control ENCSR987PBI ChIP-seq EFO:0002067 K562 cell line Homo sapiens DNMT1-human ENCAB463LOX DNA False 2016-10-31 ENCODE 2 ENCFF227IZS, ENCFF378UVV 1246369900 ENCODE Processing Pipeline 985cc1463763deab98aa7644fdbe274b https://www.encodeproject.org/files/ENCFF515GYS/@@download/ENCFF515GYS.bigWig GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, antibody characterized with exemption ENCFF992NLQ bigWig fold change over control ENCSR987PBI ChIP-seq EFO:0002067 K562 cell line Homo sapiens DNMT1-human ENCAB463LOX DNA False 2016-10-31 ENCODE 1, 2 ENCFF227IZS, ENCFF378UVV, ENCFF573OTF, ENCFF910IKB 2133937919 ENCODE Processing Pipeline fa2e95a34e0117bb07227e3409090c8a https://www.encodeproject.org/files/ENCFF992NLQ/@@download/ENCFF992NLQ.bigWig GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, antibody characterized with exemption ENCFF823TIB bed narrowPeak peaks ENCSR987PBI ChIP-seq EFO:0002067 K562 cell line Homo sapiens DNMT1-human ENCAB463LOX DNA False 2016-10-31 ENCODE 1 ENCFF573OTF, ENCFF910IKB 6544776 ENCODE Processing Pipeline d1055dad7904b3f75fc7d662f6fb4de7 https://www.encodeproject.org/files/ENCFF823TIB/@@download/ENCFF823TIB.bed.gz GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, antibody characterized with exemption ENCFF997WEM bed narrowPeak peaks ENCSR987PBI ChIP-seq EFO:0002067 K562 cell line Homo sapiens DNMT1-human ENCAB463LOX DNA False 2016-10-31 ENCODE 2 ENCFF227IZS, ENCFF378UVV 6752341 ENCODE Processing Pipeline a5294f45391169efc94cd59885e60849 https://www.encodeproject.org/files/ENCFF997WEM/@@download/ENCFF997WEM.bed.gz GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, antibody characterized with exemption ENCFF129ADK bed narrowPeak peaks ENCSR987PBI ChIP-seq EFO:0002067 K562 cell line Homo sapiens DNMT1-human ENCAB463LOX DNA False 2016-10-31 ENCODE 1, 2 ENCFF227IZS, ENCFF378UVV, ENCFF573OTF, ENCFF910IKB 7216775 ENCODE Processing Pipeline 9598eed5ee7b6fe4ee2dacfaff9e0e3b https://www.encodeproject.org/files/ENCFF129ADK/@@download/ENCFF129ADK.bed.gz GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, antibody characterized with exemption ENCFF915IHL bigBed narrowPeak peaks ENCSR987PBI ChIP-seq EFO:0002067 K562 cell line Homo sapiens DNMT1-human ENCAB463LOX DNA False 2016-10-31 ENCODE 1 ENCFF823TIB 13217196 ENCODE Processing Pipeline 34417df72a23128056d3765b145ae96d https://www.encodeproject.org/files/ENCFF915IHL/@@download/ENCFF915IHL.bigBed GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, antibody characterized with exemption ENCFF287HGN bigBed narrowPeak peaks ENCSR987PBI ChIP-seq EFO:0002067 K562 cell line Homo sapiens DNMT1-human ENCAB463LOX DNA False 2016-10-31 ENCODE 2 ENCFF997WEM 13080851 ENCODE Processing Pipeline 75eddebefdb7909c650685f41a36fab4 https://www.encodeproject.org/files/ENCFF287HGN/@@download/ENCFF287HGN.bigBed GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, antibody characterized with exemption ENCFF070OQI bigBed narrowPeak peaks ENCSR987PBI ChIP-seq EFO:0002067 K562 cell line Homo sapiens DNMT1-human ENCAB463LOX DNA False 2016-10-31 ENCODE 1, 2 ENCFF129ADK 12950836 ENCODE Processing Pipeline cb5cd1e2f2d7df804361e2dc99b105e6 https://www.encodeproject.org/files/ENCFF070OQI/@@download/ENCFF070OQI.bigBed GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, antibody characterized with exemption ENCFF505HOV bed narrowPeak conservative idr thresholded peaks ENCSR987PBI ChIP-seq EFO:0002067 K562 cell line Homo sapiens DNMT1-human ENCAB463LOX DNA False 2016-10-31 ENCODE 1, 2 ENCFF129ADK, ENCFF419RSJ, ENCFF823TIB, ENCFF997WEM 22760 ENCODE Processing Pipeline 2f9670056522d97050504be2a0ce6996 https://www.encodeproject.org/files/ENCFF505HOV/@@download/ENCFF505HOV.bed.gz GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, antibody characterized with exemption ENCFF973PUF bigBed narrowPeak conservative idr thresholded peaks ENCSR987PBI ChIP-seq EFO:0002067 K562 cell line Homo sapiens DNMT1-human ENCAB463LOX DNA False 2016-10-31 ENCODE 1, 2 ENCFF505HOV 102422 ENCODE Processing Pipeline d5665bbde9a53dc7f030ccd83d42f0e9 https://www.encodeproject.org/files/ENCFF973PUF/@@download/ENCFF973PUF.bigBed GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, antibody characterized with exemption ENCFF549TVW bed narrowPeak optimal idr thresholded peaks ENCSR987PBI ChIP-seq EFO:0002067 K562 cell line Homo sapiens DNMT1-human ENCAB463LOX DNA False 2016-10-31 ENCODE 1, 2 ENCFF129ADK, ENCFF419RSJ, ENCFF823TIB, ENCFF997WEM 69618 ENCODE Processing Pipeline fbd5755d528bd1922c7187aa896ed42c https://www.encodeproject.org/files/ENCFF549TVW/@@download/ENCFF549TVW.bed.gz GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, antibody characterized with exemption ENCFF251CKT bigBed narrowPeak optimal idr thresholded peaks ENCSR987PBI ChIP-seq EFO:0002067 K562 cell line Homo sapiens DNMT1-human ENCAB463LOX DNA False 2016-10-31 ENCODE 1, 2 ENCFF549TVW 179227 ENCODE Processing Pipeline ec304eccd4b655e4f8570b2597068dca https://www.encodeproject.org/files/ENCFF251CKT/@@download/ENCFF251CKT.bigBed GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, antibody characterized with exemption ENCFF503FIY bam unfiltered alignments ENCSR331GDC ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB11-human ENCAB000BJN DNA False 2016-06-28 ENCODE 2 50 ENCFF088CRF, ENCFF807MUK 1224670823 ENCODE Processing Pipeline f1aca23a41505b55226fe035178eb414 https://www.encodeproject.org/files/ENCFF503FIY/@@download/ENCFF503FIY.bam hg19 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity ENCFF080SFN bam unfiltered alignments ENCSR331GDC ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB11-human ENCAB000BJN DNA False 2016-06-28 ENCODE 1 50 ENCFF052ZGR, ENCFF807MUK 1805036682 ENCODE Processing Pipeline bd0094cbc380630eb5ac8f24f31703a7 https://www.encodeproject.org/files/ENCFF080SFN/@@download/ENCFF080SFN.bam hg19 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity ENCFF088CRF fastq reads ENCSR331GDC ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB11-human ENCAB000BJN DNA False 2016-06-28 ENCODE 2 1 50 single-ended 1225224553 Richard Myers, HAIB 3cfdb3f38b9485d1795c454b459f0967 SRA:SRR5338579 https://www.encodeproject.org/files/ENCFF088CRF/@@download/ENCFF088CRF.fastq.gz Illumina HiSeq 2000 /files/ENCFF774EJH/ released low read depth, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity ENCFF052ZGR fastq reads ENCSR331GDC ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB11-human ENCAB000BJN DNA False 2016-06-28 ENCODE 1 1 50 single-ended 1735622346 Richard Myers, HAIB d14581d4931c72a884e69a61d4c31682 SRA:SRR5338578 https://www.encodeproject.org/files/ENCFF052ZGR/@@download/ENCFF052ZGR.fastq.gz Illumina HiSeq 2000 /files/ENCFF400XMH/ released low read depth, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity ENCFF953SAQ bam alignments ENCSR331GDC ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB11-human ENCAB000BJN DNA False 2016-06-28 ENCODE 2 50 ENCFF088CRF, ENCFF807MUK 780951289 ENCODE Processing Pipeline ee706d0402732860923e0e4c17ca8622 https://www.encodeproject.org/files/ENCFF953SAQ/@@download/ENCFF953SAQ.bam hg19 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity ENCFF144CPG bam alignments ENCSR331GDC ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB11-human ENCAB000BJN DNA False 2016-06-28 ENCODE 1 50 ENCFF052ZGR, ENCFF807MUK 1259652794 ENCODE Processing Pipeline 1772459f11ec738d641217228bd94ae5 https://www.encodeproject.org/files/ENCFF144CPG/@@download/ENCFF144CPG.bam hg19 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity ENCFF130NRI bigWig fold change over control ENCSR331GDC ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB11-human ENCAB000BJN DNA False 2016-06-28 ENCODE 1 ENCFF144CPG, ENCFF227XXD, ENCFF454QBD 782751309 ENCODE Processing Pipeline 667e4bbb4c31b93bf3a54fa5936f94ba https://www.encodeproject.org/files/ENCFF130NRI/@@download/ENCFF130NRI.bigWig hg19 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity ENCFF864WXX bigWig signal p-value ENCSR331GDC ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB11-human ENCAB000BJN DNA False 2016-06-28 ENCODE 2 ENCFF227XXD, ENCFF454QBD, ENCFF953SAQ 837113966 ENCODE Processing Pipeline ecd383b9fe72626d96b32e9c2e653445 https://www.encodeproject.org/files/ENCFF864WXX/@@download/ENCFF864WXX.bigWig hg19 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity ENCFF372AWS bigWig signal p-value ENCSR331GDC ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB11-human ENCAB000BJN DNA False 2016-06-28 ENCODE 1 ENCFF144CPG, ENCFF227XXD, ENCFF454QBD 912715326 ENCODE Processing Pipeline 21ffa6f16d0ff2ea3e2faa009b83e1fb https://www.encodeproject.org/files/ENCFF372AWS/@@download/ENCFF372AWS.bigWig hg19 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity ENCFF661YGP bigWig signal p-value ENCSR331GDC ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB11-human ENCAB000BJN DNA False 2016-06-28 ENCODE 1, 2 ENCFF144CPG, ENCFF227XXD, ENCFF454QBD, ENCFF953SAQ 1002410894 ENCODE Processing Pipeline f8c5b6224a84a36a50d8b36dc13ffba1 https://www.encodeproject.org/files/ENCFF661YGP/@@download/ENCFF661YGP.bigWig hg19 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity ENCFF494DUB bigWig fold change over control ENCSR331GDC ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB11-human ENCAB000BJN DNA False 2016-06-28 ENCODE 2 ENCFF227XXD, ENCFF454QBD, ENCFF953SAQ 566758252 ENCODE Processing Pipeline e7e889ee478a90db6056205033969a3a https://www.encodeproject.org/files/ENCFF494DUB/@@download/ENCFF494DUB.bigWig hg19 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity ENCFF693GNL bigWig fold change over control ENCSR331GDC ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB11-human ENCAB000BJN DNA False 2016-06-28 ENCODE 1, 2 ENCFF144CPG, ENCFF227XXD, ENCFF454QBD, ENCFF953SAQ 1064968594 ENCODE Processing Pipeline 1a124f3d5506c807506cfec0b1386366 https://www.encodeproject.org/files/ENCFF693GNL/@@download/ENCFF693GNL.bigWig hg19 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity ENCFF416FBH bed narrowPeak peaks ENCSR331GDC ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB11-human ENCAB000BJN DNA False 2016-06-28 ENCODE 1 ENCFF144CPG, ENCFF227XXD, ENCFF454QBD 6354589 ENCODE Processing Pipeline 9838d379404171f2fb9406628afb8ef6 https://www.encodeproject.org/files/ENCFF416FBH/@@download/ENCFF416FBH.bed.gz hg19 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity ENCFF929FJI bed narrowPeak peaks ENCSR331GDC ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB11-human ENCAB000BJN DNA False 2016-06-28 ENCODE 2 ENCFF227XXD, ENCFF454QBD, ENCFF953SAQ 5900193 ENCODE Processing Pipeline cfbcf03baa291b99beb93586aa3f37cd https://www.encodeproject.org/files/ENCFF929FJI/@@download/ENCFF929FJI.bed.gz hg19 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity ENCFF429ZJG bed narrowPeak peaks ENCSR331GDC ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB11-human ENCAB000BJN DNA False 2016-06-28 ENCODE 1, 2 ENCFF144CPG, ENCFF227XXD, ENCFF454QBD, ENCFF953SAQ 6721454 ENCODE Processing Pipeline f11c47d20371228932e49a1b4b9c3ef5 https://www.encodeproject.org/files/ENCFF429ZJG/@@download/ENCFF429ZJG.bed.gz hg19 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity ENCFF884WZN bigBed narrowPeak peaks ENCSR331GDC ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB11-human ENCAB000BJN DNA False 2016-06-28 ENCODE 1 ENCFF416FBH 13481760 ENCODE Processing Pipeline 5f81cb337c028880aeb21227991211d3 https://www.encodeproject.org/files/ENCFF884WZN/@@download/ENCFF884WZN.bigBed hg19 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity ENCFF570OCZ bigBed narrowPeak peaks ENCSR331GDC ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB11-human ENCAB000BJN DNA False 2016-06-28 ENCODE 2 ENCFF929FJI 13449373 ENCODE Processing Pipeline b54ae98bfa5bfbd4e1b4e55cffdc9c78 https://www.encodeproject.org/files/ENCFF570OCZ/@@download/ENCFF570OCZ.bigBed hg19 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity ENCFF142ROP bigBed narrowPeak peaks ENCSR331GDC ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB11-human ENCAB000BJN DNA False 2016-06-28 ENCODE 1, 2 ENCFF429ZJG 13424525 ENCODE Processing Pipeline 568838d52e010f3c5ec37bdadd8457e0 https://www.encodeproject.org/files/ENCFF142ROP/@@download/ENCFF142ROP.bigBed hg19 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity ENCFF719KST bed narrowPeak conservative idr thresholded peaks ENCSR331GDC ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB11-human ENCAB000BJN DNA False 2016-06-28 ENCODE 1, 2 ENCFF001TDO, ENCFF416FBH, ENCFF429ZJG, ENCFF929FJI 111600 ENCODE Processing Pipeline 95a7f52d4d77b88ebefe468566d3a599 https://www.encodeproject.org/files/ENCFF719KST/@@download/ENCFF719KST.bed.gz hg19 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity ENCFF944TTQ bigBed narrowPeak conservative idr thresholded peaks ENCSR331GDC ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB11-human ENCAB000BJN DNA False 2016-06-28 ENCODE 1, 2 ENCFF719KST 284858 ENCODE Processing Pipeline aa7a99bc759319292ae1f3b15361374b https://www.encodeproject.org/files/ENCFF944TTQ/@@download/ENCFF944TTQ.bigBed hg19 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity ENCFF434QZL bed narrowPeak optimal idr thresholded peaks ENCSR331GDC ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB11-human ENCAB000BJN DNA False 2016-06-28 ENCODE 1, 2 ENCFF001TDO, ENCFF416FBH, ENCFF429ZJG, ENCFF929FJI 128593 ENCODE Processing Pipeline 4f90e8cc9263cacf63e92bbbf564133f https://www.encodeproject.org/files/ENCFF434QZL/@@download/ENCFF434QZL.bed.gz hg19 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity ENCFF594PIQ bigBed narrowPeak optimal idr thresholded peaks ENCSR331GDC ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB11-human ENCAB000BJN DNA False 2016-06-28 ENCODE 1, 2 ENCFF434QZL 310929 ENCODE Processing Pipeline 43b39396a59a85b393d663e234e6293d https://www.encodeproject.org/files/ENCFF594PIQ/@@download/ENCFF594PIQ.bigBed hg19 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity ENCFF465CQV bam unfiltered alignments ENCSR331GDC ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB11-human ENCAB000BJN DNA False 2016-06-28 ENCODE 2 50 ENCFF088CRF, ENCFF643CGH 1227881778 ENCODE Processing Pipeline e2bf4218c3645c929986c8aad935cb1e https://www.encodeproject.org/files/ENCFF465CQV/@@download/ENCFF465CQV.bam GRCh38 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity ENCFF818RKE bam unfiltered alignments ENCSR331GDC ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB11-human ENCAB000BJN DNA False 2016-06-28 ENCODE 1 50 ENCFF052ZGR, ENCFF643CGH 1809479121 ENCODE Processing Pipeline ecb3900b172e779d5c5526126635fde8 https://www.encodeproject.org/files/ENCFF818RKE/@@download/ENCFF818RKE.bam GRCh38 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity ENCFF290MEZ bam alignments ENCSR331GDC ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB11-human ENCAB000BJN DNA False 2016-06-28 ENCODE 2 50 ENCFF088CRF, ENCFF643CGH 780462628 ENCODE Processing Pipeline 03c6e84f5dde18a33ac814c70c0f8494 https://www.encodeproject.org/files/ENCFF290MEZ/@@download/ENCFF290MEZ.bam GRCh38 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity ENCFF544ZPF bam alignments ENCSR331GDC ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB11-human ENCAB000BJN DNA False 2016-06-28 ENCODE 1 50 ENCFF052ZGR, ENCFF643CGH 1258971772 ENCODE Processing Pipeline add3eee9dea099401f10347bdb3be49a https://www.encodeproject.org/files/ENCFF544ZPF/@@download/ENCFF544ZPF.bam GRCh38 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity ENCFF573KIX bigWig signal p-value ENCSR331GDC ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB11-human ENCAB000BJN DNA False 2016-06-28 ENCODE 1 ENCFF063BAN, ENCFF213VVQ, ENCFF544ZPF 872193364 ENCODE Processing Pipeline 4b0d6760dc86e1a5a080eab6d31d19ef https://www.encodeproject.org/files/ENCFF573KIX/@@download/ENCFF573KIX.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity ENCFF683QDN bigWig signal p-value ENCSR331GDC ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB11-human ENCAB000BJN DNA False 2016-06-28 ENCODE 2 ENCFF063BAN, ENCFF213VVQ, ENCFF290MEZ 805130479 ENCODE Processing Pipeline 13be03f01b95fbb6cca4f967a7389cce https://www.encodeproject.org/files/ENCFF683QDN/@@download/ENCFF683QDN.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity ENCFF196XYY bigWig fold change over control ENCSR331GDC ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB11-human ENCAB000BJN DNA False 2016-06-28 ENCODE 1 ENCFF063BAN, ENCFF213VVQ, ENCFF544ZPF 782642129 ENCODE Processing Pipeline bb759b45af0348019dfba5f1aa0b0f1a https://www.encodeproject.org/files/ENCFF196XYY/@@download/ENCFF196XYY.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity ENCFF337BHU bigWig signal p-value ENCSR331GDC ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB11-human ENCAB000BJN DNA False 2016-06-28 ENCODE 1, 2 ENCFF063BAN, ENCFF213VVQ, ENCFF290MEZ, ENCFF544ZPF 1107179136 ENCODE Processing Pipeline 39fdb76eea3ba4fe4b6148b0cb3c8b36 https://www.encodeproject.org/files/ENCFF337BHU/@@download/ENCFF337BHU.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity ENCFF911OFZ bigWig fold change over control ENCSR331GDC ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB11-human ENCAB000BJN DNA False 2016-06-28 ENCODE 2 ENCFF063BAN, ENCFF213VVQ, ENCFF290MEZ 574732836 ENCODE Processing Pipeline baa019407ce1d734995a865f44938997 https://www.encodeproject.org/files/ENCFF911OFZ/@@download/ENCFF911OFZ.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity ENCFF777KJU bigWig fold change over control ENCSR331GDC ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB11-human ENCAB000BJN DNA False 2016-06-28 ENCODE 1, 2 ENCFF063BAN, ENCFF213VVQ, ENCFF290MEZ, ENCFF544ZPF 1050274137 ENCODE Processing Pipeline d42a4ef1b036896e2842a588a79a9bdf https://www.encodeproject.org/files/ENCFF777KJU/@@download/ENCFF777KJU.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity ENCFF486YBJ bed narrowPeak peaks ENCSR331GDC ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB11-human ENCAB000BJN DNA False 2016-06-28 ENCODE 2 ENCFF063BAN, ENCFF213VVQ, ENCFF290MEZ 5728178 ENCODE Processing Pipeline 0e7310b6996bb7f29f30cb9eddcaccf0 https://www.encodeproject.org/files/ENCFF486YBJ/@@download/ENCFF486YBJ.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity ENCFF737CGV bed narrowPeak peaks ENCSR331GDC ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB11-human ENCAB000BJN DNA False 2016-06-28 ENCODE 1, 2 ENCFF063BAN, ENCFF213VVQ, ENCFF290MEZ, ENCFF544ZPF 6557854 ENCODE Processing Pipeline 43cd66592b1c67a3296893c809fe7113 https://www.encodeproject.org/files/ENCFF737CGV/@@download/ENCFF737CGV.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity ENCFF540MKX bigBed narrowPeak peaks ENCSR331GDC ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB11-human ENCAB000BJN DNA False 2016-06-28 ENCODE 2 ENCFF486YBJ 13427229 ENCODE Processing Pipeline e5c1df5b6265a4294258748b15f649e9 https://www.encodeproject.org/files/ENCFF540MKX/@@download/ENCFF540MKX.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity ENCFF012GDK bigBed narrowPeak peaks ENCSR331GDC ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB11-human ENCAB000BJN DNA False 2016-06-28 ENCODE 1, 2 ENCFF737CGV 13426524 ENCODE Processing Pipeline 31ea60bc94521a27e90ab732f197c409 https://www.encodeproject.org/files/ENCFF012GDK/@@download/ENCFF012GDK.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity ENCFF983RQW bed narrowPeak peaks ENCSR331GDC ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB11-human ENCAB000BJN DNA False 2016-06-28 ENCODE 1 ENCFF063BAN, ENCFF213VVQ, ENCFF544ZPF 6138545 ENCODE Processing Pipeline 201862c3d0457ae2cb4193b5c8341565 https://www.encodeproject.org/files/ENCFF983RQW/@@download/ENCFF983RQW.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity ENCFF710VXX bigBed narrowPeak peaks ENCSR331GDC ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB11-human ENCAB000BJN DNA False 2016-06-28 ENCODE 1 ENCFF983RQW 13467520 ENCODE Processing Pipeline dda13f464a141de4798f0d4975e5438d https://www.encodeproject.org/files/ENCFF710VXX/@@download/ENCFF710VXX.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity ENCFF352LFK bigBed narrowPeak conservative idr thresholded peaks ENCSR331GDC ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB11-human ENCAB000BJN DNA False 2016-06-28 ENCODE 1, 2 ENCFF059AZP 286889 ENCODE Processing Pipeline e8f2bbbfd4ac7d52dc228f15cc25c7b4 https://www.encodeproject.org/files/ENCFF352LFK/@@download/ENCFF352LFK.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity ENCFF013PKN bigBed narrowPeak optimal idr thresholded peaks ENCSR331GDC ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB11-human ENCAB000BJN DNA False 2016-06-28 ENCODE 1, 2 ENCFF913HCQ 317835 ENCODE Processing Pipeline 57f4068b469877cd352a95c1121d7454 https://www.encodeproject.org/files/ENCFF013PKN/@@download/ENCFF013PKN.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity ENCFF059AZP bed narrowPeak conservative idr thresholded peaks ENCSR331GDC ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB11-human ENCAB000BJN DNA False 2016-06-28 ENCODE 1, 2 ENCFF419RSJ, ENCFF486YBJ, ENCFF737CGV, ENCFF983RQW 112313 ENCODE Processing Pipeline 5b315df459532cd4d767e2dc11387fb2 https://www.encodeproject.org/files/ENCFF059AZP/@@download/ENCFF059AZP.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity ENCFF913HCQ bed narrowPeak optimal idr thresholded peaks ENCSR331GDC ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB11-human ENCAB000BJN DNA False 2016-06-28 ENCODE 1, 2 ENCFF419RSJ, ENCFF486YBJ, ENCFF737CGV, ENCFF983RQW 132646 ENCODE Processing Pipeline b70784948dfa6357fa0dc16a2d1d4dc2 https://www.encodeproject.org/files/ENCFF913HCQ/@@download/ENCFF913HCQ.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity ENCFF000QDK bigBed broadPeak peaks ENCSR000BMR ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1 1 ENCFF001UKT 1468709 Richard Myers, HAIB 5f5c62829a2f7746a0afceab575c44d2 https://www.encodeproject.org/files/ENCFF000QDK/@@download/ENCFF000QDK.bigBed hg19 archived low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample control insufficient read depth ENCFF000QDL bigBed broadPeak peaks ENCSR000BMR ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 2 1 ENCFF001UKU 1570729 Richard Myers, HAIB df20fcc3d4f72ba9e0cc98a79ca07870 https://www.encodeproject.org/files/ENCFF000QDL/@@download/ENCFF000QDL.bigBed hg19 archived low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample control insufficient read depth ENCFF000QDM bam alignments ENCSR000BMR ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1 ENCFF000QDX 1188633411 Richard Myers, HAIB bbc1875d667b03bf45dadba8c114007d https://www.encodeproject.org/files/ENCFF000QDM/@@download/ENCFF000QDM.bam hg19 archived low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample control insufficient read depth ENCFF000QDN bam alignments ENCSR000BMR ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 2 ENCFF000QDY 1084199150 Richard Myers, HAIB d2a8c82963d765975a842011aee6e650 https://www.encodeproject.org/files/ENCFF000QDN/@@download/ENCFF000QDN.bam hg19 archived low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample control insufficient read depth ENCFF000QDP bigWig raw signal ENCSR000BMR ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1 1 77697882 Richard Myers, HAIB e8421b5c7bf0f7469f28811a9cc3572d https://www.encodeproject.org/files/ENCFF000QDP/@@download/ENCFF000QDP.bigWig hg19 archived low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample, missing derived_from control insufficient read depth ENCFF000QDQ bigWig raw signal ENCSR000BMR ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 2 1 84397178 Richard Myers, HAIB 9006e1f933bf5eb538d8130609202ceb https://www.encodeproject.org/files/ENCFF000QDQ/@@download/ENCFF000QDQ.bigWig hg19 archived low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample, missing derived_from control insufficient read depth ENCFF000QDX fastq reads ENCSR000BMR ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1 1 36 single-ended 1210086523 Richard Myers, HAIB 792ab7fc24b36de1ed2bd26df78d962d https://www.encodeproject.org/files/ENCFF000QDX/@@download/ENCFF000QDX.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000QEX/ released low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample control insufficient read depth ENCFF000QDY fastq reads ENCSR000BMR ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 2 1 36 single-ended 1202184777 Richard Myers, HAIB 5228a4d13ac3faae7a64af1b12c0d9d6 https://www.encodeproject.org/files/ENCFF000QDY/@@download/ENCFF000QDY.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000QEX/ released low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample control insufficient read depth ENCFF001UKT bed broadPeak peaks ENCSR000BMR ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1 1 761817 Richard Myers, HAIB 565f9ad826cef16de8d415a996a4ad7f https://www.encodeproject.org/files/ENCFF001UKT/@@download/ENCFF001UKT.bed.gz hg19 archived low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample, missing derived_from control insufficient read depth ENCFF001UKU bed broadPeak peaks ENCSR000BMR ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 2 1 895255 Richard Myers, HAIB c28ca2b77ed0744ecc40bf064d950949 https://www.encodeproject.org/files/ENCFF001UKU/@@download/ENCFF001UKU.bed.gz hg19 archived low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample, missing derived_from control insufficient read depth ENCFF002CMI bed narrowPeak optimal idr thresholded peaks ENCSR000BMR ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 532836 ENCODE Consortium Analysis Working Group 7fe8a69c0507eec9a25e61ba3bca8410 https://www.encodeproject.org/files/ENCFF002CMI/@@download/ENCFF002CMI.bed.gz hg19 archived low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample, missing derived_from control insufficient read depth ENCFF813NUH bigBed narrowPeak optimal idr thresholded peaks ENCSR000BMR ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE ENCFF002CMI 1402993 ENCODE Consortium b06f8b3d23dd06ddbdac4e4c30926273 https://www.encodeproject.org/files/ENCFF813NUH/@@download/ENCFF813NUH.bigBed hg19 archived low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample control insufficient read depth ENCFF413ABF bam unfiltered alignments ENCSR000BMR ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000QDX, ENCFF643CGH 1423411199 ENCODE Processing Pipeline a6d50df7fbe1e5c5a980533cc355aa8b https://www.encodeproject.org/files/ENCFF413ABF/@@download/ENCFF413ABF.bam GRCh38 released low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample control insufficient read depth ENCFF580SKM bam unfiltered alignments ENCSR000BMR ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000QDY, ENCFF643CGH 1366729153 ENCODE Processing Pipeline bc612bc751703b54f2cb189a912cee69 https://www.encodeproject.org/files/ENCFF580SKM/@@download/ENCFF580SKM.bam GRCh38 released low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample control insufficient read depth ENCFF569DZM bam alignments ENCSR000BMR ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000QDX, ENCFF643CGH 906913300 ENCODE Processing Pipeline 1b0bc1603abb69dce28020f3469b7a1e https://www.encodeproject.org/files/ENCFF569DZM/@@download/ENCFF569DZM.bam GRCh38 released low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample control insufficient read depth ENCFF140UJB bam alignments ENCSR000BMR ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000QDY, ENCFF643CGH 744417770 ENCODE Processing Pipeline dfeffef05dd93ebb0251b324379048d7 https://www.encodeproject.org/files/ENCFF140UJB/@@download/ENCFF140UJB.bam GRCh38 released low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample control insufficient read depth ENCFF612KLG bam unfiltered alignments ENCSR000BMR ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000QDY, ENCFF807MUK 1368956877 ENCODE Processing Pipeline dde0c1ad5abfd1b873ff47ff574b8fc8 https://www.encodeproject.org/files/ENCFF612KLG/@@download/ENCFF612KLG.bam hg19 released low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample control insufficient read depth ENCFF048TRY bam unfiltered alignments ENCSR000BMR ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000QDX, ENCFF807MUK 1423943675 ENCODE Processing Pipeline ae56b6a47d5f9ce0358ddb50d5a29ea0 https://www.encodeproject.org/files/ENCFF048TRY/@@download/ENCFF048TRY.bam hg19 released low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample control insufficient read depth ENCFF822HFC bam alignments ENCSR000BMR ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000QDY, ENCFF807MUK 745061537 ENCODE Processing Pipeline d45e7222baf1f131500d9e5a6de53106 https://www.encodeproject.org/files/ENCFF822HFC/@@download/ENCFF822HFC.bam hg19 released low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample control insufficient read depth ENCFF359UUS bam alignments ENCSR000BMR ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000QDX, ENCFF807MUK 907749891 ENCODE Processing Pipeline fcb194ca075724383b600743d6f360da https://www.encodeproject.org/files/ENCFF359UUS/@@download/ENCFF359UUS.bam hg19 released low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample control insufficient read depth ENCFF341OAI bigWig signal p-value ENCSR000BMR ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1 ENCFF569DZM, ENCFF772PJM 203236030 ENCODE Processing Pipeline 2ad99c6d168fe654e62a8c21cdd5435f https://www.encodeproject.org/files/ENCFF341OAI/@@download/ENCFF341OAI.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample control insufficient read depth ENCFF537OJY bigWig signal p-value ENCSR000BMR ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 2 ENCFF140UJB, ENCFF772PJM 204096087 ENCODE Processing Pipeline 0b0f31dc423d05877122642357f9addf https://www.encodeproject.org/files/ENCFF537OJY/@@download/ENCFF537OJY.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample control insufficient read depth ENCFF042CRO bigWig signal p-value ENCSR000BMR ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF140UJB, ENCFF569DZM, ENCFF772PJM 192470950 ENCODE Processing Pipeline df46a4bcfb7a2c55296211ca9cc91c70 https://www.encodeproject.org/files/ENCFF042CRO/@@download/ENCFF042CRO.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample control insufficient read depth ENCFF281XOP bigWig fold change over control ENCSR000BMR ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1 ENCFF569DZM, ENCFF772PJM 296630009 ENCODE Processing Pipeline eefef6d5be23b3f85c3c14e3707d2407 https://www.encodeproject.org/files/ENCFF281XOP/@@download/ENCFF281XOP.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample control insufficient read depth ENCFF596NUY bigWig fold change over control ENCSR000BMR ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 2 ENCFF140UJB, ENCFF772PJM 228072903 ENCODE Processing Pipeline e3495ece33da881f42efc21831d9efeb https://www.encodeproject.org/files/ENCFF596NUY/@@download/ENCFF596NUY.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample control insufficient read depth ENCFF125TEX bed narrowPeak peaks ENCSR000BMR ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 2 ENCFF140UJB, ENCFF772PJM 6389450 ENCODE Processing Pipeline bcc60babc2cbc5fe323f83b0ddfd8011 https://www.encodeproject.org/files/ENCFF125TEX/@@download/ENCFF125TEX.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample control insufficient read depth ENCFF273XOJ bed narrowPeak peaks ENCSR000BMR ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF140UJB, ENCFF569DZM, ENCFF772PJM 6982465 ENCODE Processing Pipeline a42601e81116724d570824c0fd0163d7 https://www.encodeproject.org/files/ENCFF273XOJ/@@download/ENCFF273XOJ.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample control insufficient read depth ENCFF547IOW bigWig fold change over control ENCSR000BMR ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF140UJB, ENCFF569DZM, ENCFF772PJM 451469657 ENCODE Processing Pipeline 080c234a0be1ad37cfa9699d018f92f1 https://www.encodeproject.org/files/ENCFF547IOW/@@download/ENCFF547IOW.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample control insufficient read depth ENCFF634MAL bed narrowPeak peaks ENCSR000BMR ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1 ENCFF569DZM, ENCFF772PJM 6576006 ENCODE Processing Pipeline c72e6c0fa31d60b4d09f812ceb5e5ddf https://www.encodeproject.org/files/ENCFF634MAL/@@download/ENCFF634MAL.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample control insufficient read depth ENCFF854UQT bigBed narrowPeak peaks ENCSR000BMR ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1 ENCFF634MAL 11972269 ENCODE Processing Pipeline 2a41ae13f19b277ac981105640eec4e8 https://www.encodeproject.org/files/ENCFF854UQT/@@download/ENCFF854UQT.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample control insufficient read depth ENCFF867QWZ bigBed narrowPeak peaks ENCSR000BMR ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF273XOJ 11784616 ENCODE Processing Pipeline 1c4531aa24809a06d47d479c056a2c90 https://www.encodeproject.org/files/ENCFF867QWZ/@@download/ENCFF867QWZ.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample control insufficient read depth ENCFF757ZGV bed narrowPeak conservative idr thresholded peaks ENCSR000BMR ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF125TEX, ENCFF273XOJ, ENCFF419RSJ, ENCFF634MAL 523928 ENCODE Processing Pipeline 5de4c0f1ed3d8f7300df63df129ec0c4 https://www.encodeproject.org/files/ENCFF757ZGV/@@download/ENCFF757ZGV.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample control insufficient read depth ENCFF028THW bigBed narrowPeak peaks ENCSR000BMR ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 2 ENCFF125TEX 11613164 ENCODE Processing Pipeline f683dacf3fdcb8463bc079e5824218eb https://www.encodeproject.org/files/ENCFF028THW/@@download/ENCFF028THW.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample control insufficient read depth ENCFF182YZG bed narrowPeak optimal idr thresholded peaks ENCSR000BMR ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF125TEX, ENCFF273XOJ, ENCFF419RSJ, ENCFF634MAL 664881 ENCODE Processing Pipeline b944c338bd7ff9253c3498707b9b6b12 https://www.encodeproject.org/files/ENCFF182YZG/@@download/ENCFF182YZG.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample control insufficient read depth ENCFF361RZS bigBed narrowPeak conservative idr thresholded peaks ENCSR000BMR ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF757ZGV 1191290 ENCODE Processing Pipeline 5c7b89b4c5bf24491e0dbc6d50db97dc https://www.encodeproject.org/files/ENCFF361RZS/@@download/ENCFF361RZS.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample control insufficient read depth ENCFF843WMB bigBed narrowPeak optimal idr thresholded peaks ENCSR000BMR ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF182YZG 1409434 ENCODE Processing Pipeline 7a00010453d6a3e66e71479d1d15c7d2 https://www.encodeproject.org/files/ENCFF843WMB/@@download/ENCFF843WMB.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample control insufficient read depth ENCFF882IKH bigBed narrowPeak peaks ENCSR000BMR ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 2 ENCFF281VBW 11609158 ENCODE Processing Pipeline 20ffea6b55d6bf45a42d02c19dc36393 https://www.encodeproject.org/files/ENCFF882IKH/@@download/ENCFF882IKH.bigBed hg19 released low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample control insufficient read depth ENCFF111UDE bigWig signal p-value ENCSR000BMR ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 2 ENCFF750MIM, ENCFF822HFC 204284084 ENCODE Processing Pipeline 302fb319f529cc725fbf881ee03fe1a0 https://www.encodeproject.org/files/ENCFF111UDE/@@download/ENCFF111UDE.bigWig hg19 released low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample control insufficient read depth ENCFF666QLJ bigBed narrowPeak peaks ENCSR000BMR ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1 ENCFF773FKD 11932358 ENCODE Processing Pipeline ae8cb69a614fd30ed3e83c7fb9bb8d72 https://www.encodeproject.org/files/ENCFF666QLJ/@@download/ENCFF666QLJ.bigBed hg19 released low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample control insufficient read depth ENCFF749YKR bigWig fold change over control ENCSR000BMR ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1 ENCFF359UUS, ENCFF750MIM 296407693 ENCODE Processing Pipeline 7f3cf7d76f105295a0e987b18eb6e689 https://www.encodeproject.org/files/ENCFF749YKR/@@download/ENCFF749YKR.bigWig hg19 released low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample control insufficient read depth ENCFF773FKD bed narrowPeak peaks ENCSR000BMR ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1 ENCFF359UUS, ENCFF750MIM 6546659 ENCODE Processing Pipeline 08864145e19459cd310de1f439f45367 https://www.encodeproject.org/files/ENCFF773FKD/@@download/ENCFF773FKD.bed.gz hg19 released low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample control insufficient read depth ENCFF866XQK bigBed narrowPeak conservative idr thresholded peaks ENCSR000BMR ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF998LIN 1190418 ENCODE Processing Pipeline 64f951bfad7ecf03e1f4827c36b0a7f9 https://www.encodeproject.org/files/ENCFF866XQK/@@download/ENCFF866XQK.bigBed hg19 released low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample control insufficient read depth ENCFF032WEB bigBed narrowPeak optimal idr thresholded peaks ENCSR000BMR ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF947KPB 1409775 ENCODE Processing Pipeline 951a52343db3195e9a093b5d95effdd6 https://www.encodeproject.org/files/ENCFF032WEB/@@download/ENCFF032WEB.bigBed hg19 released low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample control insufficient read depth ENCFF166JUY bigWig fold change over control ENCSR000BMR ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 2 ENCFF750MIM, ENCFF822HFC 227379493 ENCODE Processing Pipeline be3c566fb1cb9d597e29eaebba005607 https://www.encodeproject.org/files/ENCFF166JUY/@@download/ENCFF166JUY.bigWig hg19 released low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample control insufficient read depth ENCFF481CBJ bed narrowPeak peaks ENCSR000BMR ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF359UUS, ENCFF750MIM, ENCFF822HFC 6982709 ENCODE Processing Pipeline a13e01909d8bafdf7d8847c8ab5fb890 https://www.encodeproject.org/files/ENCFF481CBJ/@@download/ENCFF481CBJ.bed.gz hg19 released low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample control insufficient read depth ENCFF211UXU bigWig signal p-value ENCSR000BMR ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1 ENCFF359UUS, ENCFF750MIM 203437124 ENCODE Processing Pipeline ee2d6ebcac46e1cd80e9ce671e9d56ae https://www.encodeproject.org/files/ENCFF211UXU/@@download/ENCFF211UXU.bigWig hg19 released low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample control insufficient read depth ENCFF519VFR bigWig fold change over control ENCSR000BMR ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF359UUS, ENCFF750MIM, ENCFF822HFC 452281166 ENCODE Processing Pipeline f1afd6d7d9e4006ff5397fb80dca4c68 https://www.encodeproject.org/files/ENCFF519VFR/@@download/ENCFF519VFR.bigWig hg19 released low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample control insufficient read depth ENCFF837BYR bigBed narrowPeak peaks ENCSR000BMR ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF481CBJ 11778599 ENCODE Processing Pipeline 6c0ab06456a0f093eeece328e0e643cb https://www.encodeproject.org/files/ENCFF837BYR/@@download/ENCFF837BYR.bigBed hg19 released low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample control insufficient read depth ENCFF947KPB bed narrowPeak optimal idr thresholded peaks ENCSR000BMR ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF001TDO, ENCFF281VBW, ENCFF481CBJ, ENCFF773FKD 666860 ENCODE Processing Pipeline eca36e86c5002474a3e913a6d4cb699e https://www.encodeproject.org/files/ENCFF947KPB/@@download/ENCFF947KPB.bed.gz hg19 released low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample control insufficient read depth ENCFF248YES bigWig signal p-value ENCSR000BMR ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF359UUS, ENCFF750MIM, ENCFF822HFC 192904487 ENCODE Processing Pipeline c118c8eee1c348a8dd9910d5a1ce6e42 https://www.encodeproject.org/files/ENCFF248YES/@@download/ENCFF248YES.bigWig hg19 released low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample control insufficient read depth ENCFF281VBW bed narrowPeak peaks ENCSR000BMR ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 2 ENCFF750MIM, ENCFF822HFC 6390721 ENCODE Processing Pipeline 7a0c6ee271e217a9d7a0739ed77a469e https://www.encodeproject.org/files/ENCFF281VBW/@@download/ENCFF281VBW.bed.gz hg19 released low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample control insufficient read depth ENCFF998LIN bed narrowPeak conservative idr thresholded peaks ENCSR000BMR ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF001TDO, ENCFF281VBW, ENCFF481CBJ, ENCFF773FKD 525472 ENCODE Processing Pipeline ea0118d2f0cabd52b8d662f2626371a9 https://www.encodeproject.org/files/ENCFF998LIN/@@download/ENCFF998LIN.bed.gz hg19 released low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample control insufficient read depth ENCFF850KNY fastq reads ENCSR832OGB ChIP-seq EFO:0002067 K562 cell line Homo sapiens LEF1-human ENCAB442TBN DNA False 2017-05-17 ENCODE 3 1 100 paired-ended 1 ENCFF037ZGC 2538174802 Michael Snyder, Stanford d35e2ab0a045e5f3055bbd84087d64d0 SRA:SRR6214062 https://www.encodeproject.org/files/ENCFF850KNY/@@download/ENCFF850KNY.fastq.gz Illumina HiSeq 2000 /files/ENCFF410PHD/ released borderline replicate concordance, mild to moderate bottlenecking ENCFF037ZGC fastq reads ENCSR832OGB ChIP-seq EFO:0002067 K562 cell line Homo sapiens LEF1-human ENCAB442TBN DNA False 2017-05-17 ENCODE 3 1 100 paired-ended 2 ENCFF850KNY 2548379685 Michael Snyder, Stanford b14b1e912c2df420cf826730c6956625 SRA:SRR6214062 https://www.encodeproject.org/files/ENCFF037ZGC/@@download/ENCFF037ZGC.fastq.gz Illumina HiSeq 2000 /files/ENCFF368UOC/ released borderline replicate concordance, mild to moderate bottlenecking ENCFF087CSK fastq reads ENCSR832OGB ChIP-seq EFO:0002067 K562 cell line Homo sapiens LEF1-human ENCAB442TBN DNA False 2017-05-17 ENCODE 4 1 100 paired-ended 1 ENCFF660QON 2719671971 Michael Snyder, Stanford b8de3c979ae370b49ead240a17fe99f0 SRA:SRR6214061 https://www.encodeproject.org/files/ENCFF087CSK/@@download/ENCFF087CSK.fastq.gz Illumina HiSeq 2000 /files/ENCFF240DTE/ released borderline replicate concordance, mild to moderate bottlenecking ENCFF660QON fastq reads ENCSR832OGB ChIP-seq EFO:0002067 K562 cell line Homo sapiens LEF1-human ENCAB442TBN DNA False 2017-05-17 ENCODE 4 1 100 paired-ended 2 ENCFF087CSK 2755357624 Michael Snyder, Stanford a57249c5438b9c1d64c68285930df2a9 SRA:SRR6214061 https://www.encodeproject.org/files/ENCFF660QON/@@download/ENCFF660QON.fastq.gz Illumina HiSeq 2000 /files/ENCFF608MDV/ released borderline replicate concordance, mild to moderate bottlenecking ENCFF120BVV bam unfiltered alignments ENCSR832OGB ChIP-seq EFO:0002067 K562 cell line Homo sapiens LEF1-human ENCAB442TBN DNA False 2017-05-17 ENCODE 4 100 ENCFF087CSK, ENCFF660QON, ENCFF807MUK 5863818972 ENCODE Processing Pipeline 6a0edbd3f3fea6ac99d597d17b2afbf0 https://www.encodeproject.org/files/ENCFF120BVV/@@download/ENCFF120BVV.bam hg19 released borderline replicate concordance, mild to moderate bottlenecking ENCFF467IBT bam unfiltered alignments ENCSR832OGB ChIP-seq EFO:0002067 K562 cell line Homo sapiens LEF1-human ENCAB442TBN DNA False 2017-05-17 ENCODE 3 100 ENCFF037ZGC, ENCFF643CGH, ENCFF850KNY 5369049828 ENCODE Processing Pipeline 93248e7679febfcf017ac875d7a70d61 https://www.encodeproject.org/files/ENCFF467IBT/@@download/ENCFF467IBT.bam GRCh38 released borderline replicate concordance, mild to moderate bottlenecking ENCFF091KDD bam unfiltered alignments ENCSR832OGB ChIP-seq EFO:0002067 K562 cell line Homo sapiens LEF1-human ENCAB442TBN DNA False 2017-05-17 ENCODE 3 100 ENCFF037ZGC, ENCFF807MUK, ENCFF850KNY 5364886429 ENCODE Processing Pipeline 6a4fbb3ab63bc52bf7acfc0e23becabf https://www.encodeproject.org/files/ENCFF091KDD/@@download/ENCFF091KDD.bam hg19 released borderline replicate concordance, mild to moderate bottlenecking ENCFF972DIA bam unfiltered alignments ENCSR832OGB ChIP-seq EFO:0002067 K562 cell line Homo sapiens LEF1-human ENCAB442TBN DNA False 2017-05-17 ENCODE 4 100 ENCFF087CSK, ENCFF643CGH, ENCFF660QON 5869318215 ENCODE Processing Pipeline b56649562166721cf235c7bb45f13ff7 https://www.encodeproject.org/files/ENCFF972DIA/@@download/ENCFF972DIA.bam GRCh38 released borderline replicate concordance, mild to moderate bottlenecking ENCFF584YHO bam alignments ENCSR832OGB ChIP-seq EFO:0002067 K562 cell line Homo sapiens LEF1-human ENCAB442TBN DNA False 2017-05-17 ENCODE 3 100 ENCFF037ZGC, ENCFF807MUK, ENCFF850KNY 3956033575 ENCODE Processing Pipeline b9119e94f1746d3348b99fb68f38dffa https://www.encodeproject.org/files/ENCFF584YHO/@@download/ENCFF584YHO.bam hg19 released borderline replicate concordance, mild to moderate bottlenecking ENCFF605ZNL bam alignments ENCSR832OGB ChIP-seq EFO:0002067 K562 cell line Homo sapiens LEF1-human ENCAB442TBN DNA False 2017-05-17 ENCODE 3 100 ENCFF037ZGC, ENCFF643CGH, ENCFF850KNY 3957569881 ENCODE Processing Pipeline 2ef874152bd0951701ee039df4548c28 https://www.encodeproject.org/files/ENCFF605ZNL/@@download/ENCFF605ZNL.bam GRCh38 released borderline replicate concordance, mild to moderate bottlenecking ENCFF890PMJ bam alignments ENCSR832OGB ChIP-seq EFO:0002067 K562 cell line Homo sapiens LEF1-human ENCAB442TBN DNA False 2017-05-17 ENCODE 4 100 ENCFF087CSK, ENCFF660QON, ENCFF807MUK 4762761081 ENCODE Processing Pipeline 6ce5eda8f92bad464a098c283692fea6 https://www.encodeproject.org/files/ENCFF890PMJ/@@download/ENCFF890PMJ.bam hg19 released borderline replicate concordance, mild to moderate bottlenecking ENCFF347QZM bam alignments ENCSR832OGB ChIP-seq EFO:0002067 K562 cell line Homo sapiens LEF1-human ENCAB442TBN DNA False 2017-05-17 ENCODE 4 100 ENCFF087CSK, ENCFF643CGH, ENCFF660QON 4764930964 ENCODE Processing Pipeline 91961989d5223453588ac1d161f5305e https://www.encodeproject.org/files/ENCFF347QZM/@@download/ENCFF347QZM.bam GRCh38 released borderline replicate concordance, mild to moderate bottlenecking ENCFF581MDP bigWig signal p-value ENCSR832OGB ChIP-seq EFO:0002067 K562 cell line Homo sapiens LEF1-human ENCAB442TBN DNA False 2017-05-17 ENCODE 3, 4 ENCFF262CJE, ENCFF506DFV, ENCFF584YHO, ENCFF890PMJ 1843915179 ENCODE Processing Pipeline d08f9dbdae8494792cd58647995d6225 https://www.encodeproject.org/files/ENCFF581MDP/@@download/ENCFF581MDP.bigWig hg19 released borderline replicate concordance, mild to moderate bottlenecking ENCFF261RAV bigBed narrowPeak peaks ENCSR832OGB ChIP-seq EFO:0002067 K562 cell line Homo sapiens LEF1-human ENCAB442TBN DNA False 2017-05-17 ENCODE 3 ENCFF700RYG 11222361 ENCODE Processing Pipeline 116e055582847a9889aa3cd261146ed1 https://www.encodeproject.org/files/ENCFF261RAV/@@download/ENCFF261RAV.bigBed hg19 released borderline replicate concordance, mild to moderate bottlenecking ENCFF043YZF bed narrowPeak optimal idr thresholded peaks ENCSR832OGB ChIP-seq EFO:0002067 K562 cell line Homo sapiens LEF1-human ENCAB442TBN DNA False 2017-05-17 ENCODE 3, 4 ENCFF001TDO, ENCFF404ZDG, ENCFF700RYG, ENCFF804WBF 98778 ENCODE Processing Pipeline 35c35430c78f681d42182db300ec48a9 https://www.encodeproject.org/files/ENCFF043YZF/@@download/ENCFF043YZF.bed.gz hg19 released borderline replicate concordance, mild to moderate bottlenecking ENCFF393IEG bigWig signal p-value ENCSR832OGB ChIP-seq EFO:0002067 K562 cell line Homo sapiens LEF1-human ENCAB442TBN DNA False 2017-05-17 ENCODE 4 ENCFF262CJE, ENCFF506DFV, ENCFF890PMJ 1279507603 ENCODE Processing Pipeline 9fb10a1b4a485599adfdecf3a0e28307 https://www.encodeproject.org/files/ENCFF393IEG/@@download/ENCFF393IEG.bigWig hg19 released borderline replicate concordance, mild to moderate bottlenecking ENCFF404ZDG bed narrowPeak peaks ENCSR832OGB ChIP-seq EFO:0002067 K562 cell line Homo sapiens LEF1-human ENCAB442TBN DNA False 2017-05-17 ENCODE 3, 4 ENCFF262CJE, ENCFF506DFV, ENCFF584YHO, ENCFF890PMJ 7160496 ENCODE Processing Pipeline e47da557586eb7ddb30ef039b8df8649 https://www.encodeproject.org/files/ENCFF404ZDG/@@download/ENCFF404ZDG.bed.gz hg19 released borderline replicate concordance, mild to moderate bottlenecking ENCFF702ZMH bigBed narrowPeak peaks ENCSR832OGB ChIP-seq EFO:0002067 K562 cell line Homo sapiens LEF1-human ENCAB442TBN DNA False 2017-05-17 ENCODE 4 ENCFF804WBF 11196716 ENCODE Processing Pipeline b7680528a32e266f8a66f498582f04f4 https://www.encodeproject.org/files/ENCFF702ZMH/@@download/ENCFF702ZMH.bigBed hg19 released borderline replicate concordance, mild to moderate bottlenecking ENCFF866QXR bed narrowPeak conservative idr thresholded peaks ENCSR832OGB ChIP-seq EFO:0002067 K562 cell line Homo sapiens LEF1-human ENCAB442TBN DNA False 2017-05-17 ENCODE 3, 4 ENCFF001TDO, ENCFF404ZDG, ENCFF700RYG, ENCFF804WBF 54773 ENCODE Processing Pipeline 47d90eded93641d95bc5213ab6fa1047 https://www.encodeproject.org/files/ENCFF866QXR/@@download/ENCFF866QXR.bed.gz hg19 released borderline replicate concordance, mild to moderate bottlenecking ENCFF937DUT bigWig fold change over control ENCSR832OGB ChIP-seq EFO:0002067 K562 cell line Homo sapiens LEF1-human ENCAB442TBN DNA False 2017-05-17 ENCODE 4 ENCFF262CJE, ENCFF506DFV, ENCFF890PMJ 1422786814 ENCODE Processing Pipeline 18f7b2923971ced1aecc83a3c510a3f2 https://www.encodeproject.org/files/ENCFF937DUT/@@download/ENCFF937DUT.bigWig hg19 released borderline replicate concordance, mild to moderate bottlenecking ENCFF384ZSB bigBed narrowPeak optimal idr thresholded peaks ENCSR832OGB ChIP-seq EFO:0002067 K562 cell line Homo sapiens LEF1-human ENCAB442TBN DNA False 2017-05-17 ENCODE 3, 4 ENCFF043YZF 241458 ENCODE Processing Pipeline 85098f58aa4c7802e9c3beea79933c8a https://www.encodeproject.org/files/ENCFF384ZSB/@@download/ENCFF384ZSB.bigBed hg19 released borderline replicate concordance, mild to moderate bottlenecking ENCFF097ZER bigWig signal p-value ENCSR832OGB ChIP-seq EFO:0002067 K562 cell line Homo sapiens LEF1-human ENCAB442TBN DNA False 2017-05-17 ENCODE 3 ENCFF262CJE, ENCFF506DFV, ENCFF584YHO 1201218345 ENCODE Processing Pipeline 2778302d15e83976ccb0ba1e87364198 https://www.encodeproject.org/files/ENCFF097ZER/@@download/ENCFF097ZER.bigWig hg19 released borderline replicate concordance, mild to moderate bottlenecking ENCFF769QDG bigWig fold change over control ENCSR832OGB ChIP-seq EFO:0002067 K562 cell line Homo sapiens LEF1-human ENCAB442TBN DNA False 2017-05-17 ENCODE 3 ENCFF262CJE, ENCFF506DFV, ENCFF584YHO 1294934623 ENCODE Processing Pipeline 435377e27afc4673312f7d62283328a2 https://www.encodeproject.org/files/ENCFF769QDG/@@download/ENCFF769QDG.bigWig hg19 released borderline replicate concordance, mild to moderate bottlenecking ENCFF772YTJ bigWig fold change over control ENCSR832OGB ChIP-seq EFO:0002067 K562 cell line Homo sapiens LEF1-human ENCAB442TBN DNA False 2017-05-17 ENCODE 3, 4 ENCFF262CJE, ENCFF506DFV, ENCFF584YHO, ENCFF890PMJ 1874964888 ENCODE Processing Pipeline ab605f41e4e61d496217a4aaa0502f15 https://www.encodeproject.org/files/ENCFF772YTJ/@@download/ENCFF772YTJ.bigWig hg19 released borderline replicate concordance, mild to moderate bottlenecking ENCFF700RYG bed narrowPeak peaks ENCSR832OGB ChIP-seq EFO:0002067 K562 cell line Homo sapiens LEF1-human ENCAB442TBN DNA False 2017-05-17 ENCODE 3 ENCFF262CJE, ENCFF506DFV, ENCFF584YHO 6326551 ENCODE Processing Pipeline d157d3b7aa72362fc82037deaf06629a https://www.encodeproject.org/files/ENCFF700RYG/@@download/ENCFF700RYG.bed.gz hg19 released borderline replicate concordance, mild to moderate bottlenecking ENCFF804WBF bed narrowPeak peaks ENCSR832OGB ChIP-seq EFO:0002067 K562 cell line Homo sapiens LEF1-human ENCAB442TBN DNA False 2017-05-17 ENCODE 4 ENCFF262CJE, ENCFF506DFV, ENCFF890PMJ 6701862 ENCODE Processing Pipeline 88d61b687f13462c227585bd884c04b5 https://www.encodeproject.org/files/ENCFF804WBF/@@download/ENCFF804WBF.bed.gz hg19 released borderline replicate concordance, mild to moderate bottlenecking ENCFF254WHH bigBed narrowPeak peaks ENCSR832OGB ChIP-seq EFO:0002067 K562 cell line Homo sapiens LEF1-human ENCAB442TBN DNA False 2017-05-17 ENCODE 3, 4 ENCFF404ZDG 11084589 ENCODE Processing Pipeline 5d77c8a57d678a07aec8ec83c7d3fe2d https://www.encodeproject.org/files/ENCFF254WHH/@@download/ENCFF254WHH.bigBed hg19 released borderline replicate concordance, mild to moderate bottlenecking ENCFF561MCO bigBed narrowPeak conservative idr thresholded peaks ENCSR832OGB ChIP-seq EFO:0002067 K562 cell line Homo sapiens LEF1-human ENCAB442TBN DNA False 2017-05-17 ENCODE 3, 4 ENCFF866QXR 142471 ENCODE Processing Pipeline 6402c29d670e14a0ed6e7f2e518a50ab https://www.encodeproject.org/files/ENCFF561MCO/@@download/ENCFF561MCO.bigBed hg19 released borderline replicate concordance, mild to moderate bottlenecking ENCFF013EPW bigWig signal p-value ENCSR832OGB ChIP-seq EFO:0002067 K562 cell line Homo sapiens LEF1-human ENCAB442TBN DNA False 2017-05-17 ENCODE 3 ENCFF605ZNL, ENCFF720AUK, ENCFF796JTX 1137919380 ENCODE Processing Pipeline 646e12147f0cea14240b514765452982 https://www.encodeproject.org/files/ENCFF013EPW/@@download/ENCFF013EPW.bigWig GRCh38 released borderline replicate concordance, mild to moderate bottlenecking ENCFF766YHB bed narrowPeak peaks ENCSR832OGB ChIP-seq EFO:0002067 K562 cell line Homo sapiens LEF1-human ENCAB442TBN DNA False 2017-05-17 ENCODE 4 ENCFF347QZM, ENCFF720AUK, ENCFF796JTX 6653869 ENCODE Processing Pipeline 7255a42d5a5bba6560efccff7c0b4158 https://www.encodeproject.org/files/ENCFF766YHB/@@download/ENCFF766YHB.bed.gz GRCh38 released borderline replicate concordance, mild to moderate bottlenecking ENCFF697VRJ bed narrowPeak optimal idr thresholded peaks ENCSR832OGB ChIP-seq EFO:0002067 K562 cell line Homo sapiens LEF1-human ENCAB442TBN DNA False 2017-05-17 ENCODE 3, 4 ENCFF419RSJ, ENCFF747MEJ, ENCFF766YHB, ENCFF928EZI 97013 ENCODE Processing Pipeline 8203a101e2dc74caa9c493c67dc0f0a3 https://www.encodeproject.org/files/ENCFF697VRJ/@@download/ENCFF697VRJ.bed.gz GRCh38 released borderline replicate concordance, mild to moderate bottlenecking ENCFF870ESB bed narrowPeak conservative idr thresholded peaks ENCSR832OGB ChIP-seq EFO:0002067 K562 cell line Homo sapiens LEF1-human ENCAB442TBN DNA False 2017-05-17 ENCODE 3, 4 ENCFF419RSJ, ENCFF747MEJ, ENCFF766YHB, ENCFF928EZI 55075 ENCODE Processing Pipeline 773a0f440403aa0fb803e2df1da8c3bb https://www.encodeproject.org/files/ENCFF870ESB/@@download/ENCFF870ESB.bed.gz GRCh38 released borderline replicate concordance, mild to moderate bottlenecking ENCFF590ETQ bigBed narrowPeak optimal idr thresholded peaks ENCSR832OGB ChIP-seq EFO:0002067 K562 cell line Homo sapiens LEF1-human ENCAB442TBN DNA False 2017-05-17 ENCODE 3, 4 ENCFF697VRJ 239824 ENCODE Processing Pipeline 2495f09612e300d05d4b3b06d7d6ceb2 https://www.encodeproject.org/files/ENCFF590ETQ/@@download/ENCFF590ETQ.bigBed GRCh38 released borderline replicate concordance, mild to moderate bottlenecking ENCFF062YYB bigWig fold change over control ENCSR832OGB ChIP-seq EFO:0002067 K562 cell line Homo sapiens LEF1-human ENCAB442TBN DNA False 2017-05-17 ENCODE 3 ENCFF605ZNL, ENCFF720AUK, ENCFF796JTX 1277389971 ENCODE Processing Pipeline b4b17e918eadcf6c64646197ebcd0688 https://www.encodeproject.org/files/ENCFF062YYB/@@download/ENCFF062YYB.bigWig GRCh38 released borderline replicate concordance, mild to moderate bottlenecking ENCFF846CMI bigWig signal p-value ENCSR832OGB ChIP-seq EFO:0002067 K562 cell line Homo sapiens LEF1-human ENCAB442TBN DNA False 2017-05-17 ENCODE 3, 4 ENCFF347QZM, ENCFF605ZNL, ENCFF720AUK, ENCFF796JTX 1780550810 ENCODE Processing Pipeline 9442fa3e5abd0a837a791a72268ac26b https://www.encodeproject.org/files/ENCFF846CMI/@@download/ENCFF846CMI.bigWig GRCh38 released borderline replicate concordance, mild to moderate bottlenecking ENCFF420RRI bigWig fold change over control ENCSR832OGB ChIP-seq EFO:0002067 K562 cell line Homo sapiens LEF1-human ENCAB442TBN DNA False 2017-05-17 ENCODE 3, 4 ENCFF347QZM, ENCFF605ZNL, ENCFF720AUK, ENCFF796JTX 1879407589 ENCODE Processing Pipeline 0dd13337e879f2fc44b2e7a26d840dff https://www.encodeproject.org/files/ENCFF420RRI/@@download/ENCFF420RRI.bigWig GRCh38 released borderline replicate concordance, mild to moderate bottlenecking ENCFF707EBN bigBed narrowPeak conservative idr thresholded peaks ENCSR832OGB ChIP-seq EFO:0002067 K562 cell line Homo sapiens LEF1-human ENCAB442TBN DNA False 2017-05-17 ENCODE 3, 4 ENCFF870ESB 143658 ENCODE Processing Pipeline be68d4015e9e5586df8823df3be5eb08 https://www.encodeproject.org/files/ENCFF707EBN/@@download/ENCFF707EBN.bigBed GRCh38 released borderline replicate concordance, mild to moderate bottlenecking ENCFF081VHR bigWig signal p-value ENCSR832OGB ChIP-seq EFO:0002067 K562 cell line Homo sapiens LEF1-human ENCAB442TBN DNA False 2017-05-17 ENCODE 4 ENCFF347QZM, ENCFF720AUK, ENCFF796JTX 1286310265 ENCODE Processing Pipeline 56d79da2e923eeca75ded09991e47020 https://www.encodeproject.org/files/ENCFF081VHR/@@download/ENCFF081VHR.bigWig GRCh38 released borderline replicate concordance, mild to moderate bottlenecking ENCFF311KSB bigWig fold change over control ENCSR832OGB ChIP-seq EFO:0002067 K562 cell line Homo sapiens LEF1-human ENCAB442TBN DNA False 2017-05-17 ENCODE 4 ENCFF347QZM, ENCFF720AUK, ENCFF796JTX 1431600851 ENCODE Processing Pipeline 114d53cc1ed85f5fde787cc4e1b57fdc https://www.encodeproject.org/files/ENCFF311KSB/@@download/ENCFF311KSB.bigWig GRCh38 released borderline replicate concordance, mild to moderate bottlenecking ENCFF747MEJ bed narrowPeak peaks ENCSR832OGB ChIP-seq EFO:0002067 K562 cell line Homo sapiens LEF1-human ENCAB442TBN DNA False 2017-05-17 ENCODE 3, 4 ENCFF347QZM, ENCFF605ZNL, ENCFF720AUK, ENCFF796JTX 7168445 ENCODE Processing Pipeline 40736a7786f4be6af243861ae16bc42d https://www.encodeproject.org/files/ENCFF747MEJ/@@download/ENCFF747MEJ.bed.gz GRCh38 released borderline replicate concordance, mild to moderate bottlenecking ENCFF632ULG bigBed narrowPeak peaks ENCSR832OGB ChIP-seq EFO:0002067 K562 cell line Homo sapiens LEF1-human ENCAB442TBN DNA False 2017-05-17 ENCODE 3 ENCFF928EZI 11249953 ENCODE Processing Pipeline cb2fbc8ff8e153eb9ea922a0a7abe285 https://www.encodeproject.org/files/ENCFF632ULG/@@download/ENCFF632ULG.bigBed GRCh38 released borderline replicate concordance, mild to moderate bottlenecking ENCFF036POS bigBed narrowPeak peaks ENCSR832OGB ChIP-seq EFO:0002067 K562 cell line Homo sapiens LEF1-human ENCAB442TBN DNA False 2017-05-17 ENCODE 4 ENCFF766YHB 11218612 ENCODE Processing Pipeline e03aac46cb1ab635b34a4055272e0e72 https://www.encodeproject.org/files/ENCFF036POS/@@download/ENCFF036POS.bigBed GRCh38 released borderline replicate concordance, mild to moderate bottlenecking ENCFF779BZP bigBed narrowPeak peaks ENCSR832OGB ChIP-seq EFO:0002067 K562 cell line Homo sapiens LEF1-human ENCAB442TBN DNA False 2017-05-17 ENCODE 3, 4 ENCFF747MEJ 11101835 ENCODE Processing Pipeline b47a06145e447dfa22b4915c68451664 https://www.encodeproject.org/files/ENCFF779BZP/@@download/ENCFF779BZP.bigBed GRCh38 released borderline replicate concordance, mild to moderate bottlenecking ENCFF928EZI bed narrowPeak peaks ENCSR832OGB ChIP-seq EFO:0002067 K562 cell line Homo sapiens LEF1-human ENCAB442TBN DNA False 2017-05-17 ENCODE 3 ENCFF605ZNL, ENCFF720AUK, ENCFF796JTX 6308944 ENCODE Processing Pipeline 54920115ba76224279fea8f416ac7332 https://www.encodeproject.org/files/ENCFF928EZI/@@download/ENCFF928EZI.bed.gz GRCh38 released borderline replicate concordance, mild to moderate bottlenecking ENCFF335PHG fastq reads ENCSR583ACG ChIP-seq EFO:0002067 K562 cell line Homo sapiens BRD4-human ENCAB782ZNQ DNA False 2017-01-08 ENCODE 1 1 76 single-ended 1603821067 Bradley Bernstein, Broad 629b0309a8172d7ac441a7e5b491f143 SRA:SRR5832895 https://www.encodeproject.org/files/ENCFF335PHG/@@download/ENCFF335PHG.fastq.gz Illumina HiSeq 2500 /files/ENCFF000BWK/ released control low read depth, inconsistent platforms, inconsistent control read length ENCFF049ACQ fastq reads ENCSR583ACG ChIP-seq EFO:0002067 K562 cell line Homo sapiens BRD4-human ENCAB782ZNQ DNA False 2017-01-08 ENCODE 2 1 76 single-ended 1849616254 Bradley Bernstein, Broad 71055fedd6243673ebe3341b73f34174 SRA:SRR5832894 https://www.encodeproject.org/files/ENCFF049ACQ/@@download/ENCFF049ACQ.fastq.gz Illumina HiSeq 2500 /files/ENCFF283HQV/, /files/ENCFF994FIB/ released control low read depth, inconsistent platforms, inconsistent control read length ENCFF284DKI bam unfiltered alignments ENCSR583ACG ChIP-seq EFO:0002067 K562 cell line Homo sapiens BRD4-human ENCAB782ZNQ DNA False 2017-01-08 ENCODE 2 76 ENCFF049ACQ, ENCFF807MUK 2178542673 ENCODE Processing Pipeline 6c78a0767a0860453f2a4419e77dee1a https://www.encodeproject.org/files/ENCFF284DKI/@@download/ENCFF284DKI.bam hg19 released control low read depth, inconsistent platforms ENCFF153CXX bam alignments ENCSR583ACG ChIP-seq EFO:0002067 K562 cell line Homo sapiens BRD4-human ENCAB782ZNQ DNA False 2017-01-08 ENCODE 2 76 ENCFF049ACQ, ENCFF807MUK 1686672734 ENCODE Processing Pipeline ed8c7bccae280fb41cea549c452f4d6e https://www.encodeproject.org/files/ENCFF153CXX/@@download/ENCFF153CXX.bam hg19 released control low read depth, inconsistent platforms ENCFF846NAU bam unfiltered alignments ENCSR583ACG ChIP-seq EFO:0002067 K562 cell line Homo sapiens BRD4-human ENCAB782ZNQ DNA False 2017-01-08 ENCODE 1 36 ENCFF335PHG, ENCFF643CGH 1312494189 ENCODE Processing Pipeline 6096cde337a6e49ea5ed4c396781b5c5 https://www.encodeproject.org/files/ENCFF846NAU/@@download/ENCFF846NAU.bam GRCh38 released control low read depth, inconsistent platforms ENCFF652HPU bam alignments ENCSR583ACG ChIP-seq EFO:0002067 K562 cell line Homo sapiens BRD4-human ENCAB782ZNQ DNA False 2017-01-08 ENCODE 1 36 ENCFF335PHG, ENCFF643CGH 891175496 ENCODE Processing Pipeline 6fcb5f2265c4f979bb78773678d302bf https://www.encodeproject.org/files/ENCFF652HPU/@@download/ENCFF652HPU.bam GRCh38 released control low read depth, inconsistent platforms ENCFF207FFX bam alignments ENCSR583ACG ChIP-seq EFO:0002067 K562 cell line Homo sapiens BRD4-human ENCAB782ZNQ DNA False 2017-01-08 ENCODE 1 36 ENCFF335PHG, ENCFF807MUK 891808670 ENCODE Processing Pipeline ff51664e73e6fd94b6237e238db5054f https://www.encodeproject.org/files/ENCFF207FFX/@@download/ENCFF207FFX.bam hg19 released control low read depth, inconsistent platforms ENCFF195FHZ bam unfiltered alignments ENCSR583ACG ChIP-seq EFO:0002067 K562 cell line Homo sapiens BRD4-human ENCAB782ZNQ DNA False 2017-01-08 ENCODE 1 36 ENCFF335PHG, ENCFF807MUK 1292197717 ENCODE Processing Pipeline a1040ee7d73dae53969c97ce165861bb https://www.encodeproject.org/files/ENCFF195FHZ/@@download/ENCFF195FHZ.bam hg19 released control low read depth, inconsistent platforms ENCFF297BFH bam unfiltered alignments ENCSR583ACG ChIP-seq EFO:0002067 K562 cell line Homo sapiens BRD4-human ENCAB782ZNQ DNA False 2017-01-08 ENCODE 2 36 ENCFF049ACQ, ENCFF807MUK 1419432027 ENCODE Processing Pipeline 7b5fde0240b476afc39eed333042b19a https://www.encodeproject.org/files/ENCFF297BFH/@@download/ENCFF297BFH.bam hg19 released control low read depth, inconsistent platforms ENCFF341TKS bam unfiltered alignments ENCSR583ACG ChIP-seq EFO:0002067 K562 cell line Homo sapiens BRD4-human ENCAB782ZNQ DNA False 2017-01-08 ENCODE 2 36 ENCFF049ACQ, ENCFF643CGH 1437646449 ENCODE Processing Pipeline c5a9ff7ce768bef5e14e76e3b5e4b5a5 https://www.encodeproject.org/files/ENCFF341TKS/@@download/ENCFF341TKS.bam GRCh38 released control low read depth, inconsistent platforms ENCFF162YLU bam alignments ENCSR583ACG ChIP-seq EFO:0002067 K562 cell line Homo sapiens BRD4-human ENCAB782ZNQ DNA False 2017-01-08 ENCODE 2 36 ENCFF049ACQ, ENCFF807MUK 950466739 ENCODE Processing Pipeline 133331581179c2cf2b4e22ce8e00db4d https://www.encodeproject.org/files/ENCFF162YLU/@@download/ENCFF162YLU.bam hg19 released control low read depth, inconsistent platforms ENCFF860JBC bam alignments ENCSR583ACG ChIP-seq EFO:0002067 K562 cell line Homo sapiens BRD4-human ENCAB782ZNQ DNA False 2017-01-08 ENCODE 2 36 ENCFF049ACQ, ENCFF643CGH 949838539 ENCODE Processing Pipeline 0132ad941e85df5864d4e19c81c4bc46 https://www.encodeproject.org/files/ENCFF860JBC/@@download/ENCFF860JBC.bam GRCh38 released control low read depth, inconsistent platforms ENCFF343SBB bigWig signal p-value ENCSR583ACG ChIP-seq EFO:0002067 K562 cell line Homo sapiens BRD4-human ENCAB782ZNQ DNA False 2017-01-08 ENCODE 1 ENCFF207FFX, ENCFF245PJA, ENCFF574XYY 582154059 ENCODE Processing Pipeline f37f0ef95f17caff66e43b91dc73ee8e https://www.encodeproject.org/files/ENCFF343SBB/@@download/ENCFF343SBB.bigWig hg19 released control low read depth, inconsistent platforms ENCFF005YPU bigWig signal p-value ENCSR583ACG ChIP-seq EFO:0002067 K562 cell line Homo sapiens BRD4-human ENCAB782ZNQ DNA False 2017-01-08 ENCODE 2 ENCFF162YLU, ENCFF245PJA 350899943 ENCODE Processing Pipeline 14ed5b52b91186f080a34d08a50ca8ba https://www.encodeproject.org/files/ENCFF005YPU/@@download/ENCFF005YPU.bigWig hg19 released control low read depth, inconsistent platforms ENCFF653LAC bigWig fold change over control ENCSR583ACG ChIP-seq EFO:0002067 K562 cell line Homo sapiens BRD4-human ENCAB782ZNQ DNA False 2017-01-08 ENCODE 1 ENCFF207FFX, ENCFF245PJA, ENCFF574XYY 592936869 ENCODE Processing Pipeline a526710b75e1e582b8c8ea454494a02b https://www.encodeproject.org/files/ENCFF653LAC/@@download/ENCFF653LAC.bigWig hg19 released control low read depth, inconsistent platforms ENCFF980MNI bigWig signal p-value ENCSR583ACG ChIP-seq EFO:0002067 K562 cell line Homo sapiens BRD4-human ENCAB782ZNQ DNA False 2017-01-08 ENCODE 2 ENCFF829HZY, ENCFF860JBC 350552687 ENCODE Processing Pipeline 73670bd42f62fc5a6f8ca3ca19b76d4f https://www.encodeproject.org/files/ENCFF980MNI/@@download/ENCFF980MNI.bigWig GRCh38 released control low read depth, inconsistent platforms ENCFF579YSO bigWig fold change over control ENCSR583ACG ChIP-seq EFO:0002067 K562 cell line Homo sapiens BRD4-human ENCAB782ZNQ DNA False 2017-01-08 ENCODE 1 ENCFF392XRJ, ENCFF652HPU, ENCFF829HZY 599975145 ENCODE Processing Pipeline e1286a189e1197113308b9edf37457fd https://www.encodeproject.org/files/ENCFF579YSO/@@download/ENCFF579YSO.bigWig GRCh38 released control low read depth, inconsistent platforms ENCFF126ZAR bigWig signal p-value ENCSR583ACG ChIP-seq EFO:0002067 K562 cell line Homo sapiens BRD4-human ENCAB782ZNQ DNA False 2017-01-08 ENCODE 1 ENCFF392XRJ, ENCFF652HPU, ENCFF829HZY 553414567 ENCODE Processing Pipeline b28b44324d3724a851c530a61f7da4c0 https://www.encodeproject.org/files/ENCFF126ZAR/@@download/ENCFF126ZAR.bigWig GRCh38 released control low read depth, inconsistent platforms ENCFF777BWF bigWig signal p-value ENCSR583ACG ChIP-seq EFO:0002067 K562 cell line Homo sapiens BRD4-human ENCAB782ZNQ DNA False 2017-01-08 ENCODE 1, 2 ENCFF392XRJ, ENCFF652HPU, ENCFF829HZY, ENCFF860JBC 682933533 ENCODE Processing Pipeline 7c26487f4d6e2bddda26bc3aeddcb0ca https://www.encodeproject.org/files/ENCFF777BWF/@@download/ENCFF777BWF.bigWig GRCh38 released control low read depth, inconsistent platforms ENCFF360QPF bigWig signal p-value ENCSR583ACG ChIP-seq EFO:0002067 K562 cell line Homo sapiens BRD4-human ENCAB782ZNQ DNA False 2017-01-08 ENCODE 1, 2 ENCFF162YLU, ENCFF207FFX, ENCFF245PJA, ENCFF574XYY 683527554 ENCODE Processing Pipeline 42a1b6b6dafd02a37afc9a5090866fa2 https://www.encodeproject.org/files/ENCFF360QPF/@@download/ENCFF360QPF.bigWig hg19 released control low read depth, inconsistent platforms ENCFF119IJS bed narrowPeak peaks ENCSR583ACG ChIP-seq EFO:0002067 K562 cell line Homo sapiens BRD4-human ENCAB782ZNQ DNA False 2017-01-08 ENCODE 1, 2 ENCFF392XRJ, ENCFF652HPU, ENCFF829HZY, ENCFF860JBC 4446870 ENCODE Processing Pipeline 7defd19a814aff71e31ce686a45db6db https://www.encodeproject.org/files/ENCFF119IJS/@@download/ENCFF119IJS.bed.gz GRCh38 released control low read depth, inconsistent platforms ENCFF726ZOI bigWig fold change over control ENCSR583ACG ChIP-seq EFO:0002067 K562 cell line Homo sapiens BRD4-human ENCAB782ZNQ DNA False 2017-01-08 ENCODE 2 ENCFF829HZY, ENCFF860JBC 461182263 ENCODE Processing Pipeline 4d76de56e459a9355e61febac0c42455 https://www.encodeproject.org/files/ENCFF726ZOI/@@download/ENCFF726ZOI.bigWig GRCh38 released control low read depth, inconsistent platforms ENCFF324AFU bigWig fold change over control ENCSR583ACG ChIP-seq EFO:0002067 K562 cell line Homo sapiens BRD4-human ENCAB782ZNQ DNA False 2017-01-08 ENCODE 2 ENCFF162YLU, ENCFF245PJA 460322428 ENCODE Processing Pipeline 4c4ba04b45eae06f2d41434b1fa82fb4 https://www.encodeproject.org/files/ENCFF324AFU/@@download/ENCFF324AFU.bigWig hg19 released control low read depth, inconsistent platforms ENCFF064FWV bigBed narrowPeak peaks ENCSR583ACG ChIP-seq EFO:0002067 K562 cell line Homo sapiens BRD4-human ENCAB782ZNQ DNA False 2017-01-08 ENCODE 1 ENCFF191IRT 13022781 ENCODE Processing Pipeline ba8f73cbba0b74a808f35c30e7a66c27 https://www.encodeproject.org/files/ENCFF064FWV/@@download/ENCFF064FWV.bigBed GRCh38 released control low read depth, inconsistent platforms ENCFF522VTB bigBed narrowPeak peaks ENCSR583ACG ChIP-seq EFO:0002067 K562 cell line Homo sapiens BRD4-human ENCAB782ZNQ DNA False 2017-01-08 ENCODE 2 ENCFF267CBS 13083035 ENCODE Processing Pipeline 1ed767c6070efeac2447b8e9ae84ef5c https://www.encodeproject.org/files/ENCFF522VTB/@@download/ENCFF522VTB.bigBed hg19 released control low read depth, inconsistent platforms ENCFF888JOO bigWig fold change over control ENCSR583ACG ChIP-seq EFO:0002067 K562 cell line Homo sapiens BRD4-human ENCAB782ZNQ DNA False 2017-01-08 ENCODE 1, 2 ENCFF392XRJ, ENCFF652HPU, ENCFF829HZY, ENCFF860JBC 910987259 ENCODE Processing Pipeline e35fff822210c5ba63b8868786f345d4 https://www.encodeproject.org/files/ENCFF888JOO/@@download/ENCFF888JOO.bigWig GRCh38 released control low read depth, inconsistent platforms ENCFF191IRT bed narrowPeak peaks ENCSR583ACG ChIP-seq EFO:0002067 K562 cell line Homo sapiens BRD4-human ENCAB782ZNQ DNA False 2017-01-08 ENCODE 1 ENCFF392XRJ, ENCFF652HPU, ENCFF829HZY 6457184 ENCODE Processing Pipeline 2084f98a66769daa66716ad4d9208174 https://www.encodeproject.org/files/ENCFF191IRT/@@download/ENCFF191IRT.bed.gz GRCh38 released control low read depth, inconsistent platforms ENCFF884DZX bed narrowPeak peaks ENCSR583ACG ChIP-seq EFO:0002067 K562 cell line Homo sapiens BRD4-human ENCAB782ZNQ DNA False 2017-01-08 ENCODE 2 ENCFF829HZY, ENCFF860JBC 5978308 ENCODE Processing Pipeline e692e8265200557dc1c3583c6057e0d4 https://www.encodeproject.org/files/ENCFF884DZX/@@download/ENCFF884DZX.bed.gz GRCh38 released control low read depth, inconsistent platforms ENCFF118EOA bed narrowPeak peaks ENCSR583ACG ChIP-seq EFO:0002067 K562 cell line Homo sapiens BRD4-human ENCAB782ZNQ DNA False 2017-01-08 ENCODE 1, 2 ENCFF162YLU, ENCFF207FFX, ENCFF245PJA, ENCFF574XYY 4441877 ENCODE Processing Pipeline a073d466810f865c5036a394aa4150d3 https://www.encodeproject.org/files/ENCFF118EOA/@@download/ENCFF118EOA.bed.gz hg19 released control low read depth, inconsistent platforms ENCFF260JHC bigWig fold change over control ENCSR583ACG ChIP-seq EFO:0002067 K562 cell line Homo sapiens BRD4-human ENCAB782ZNQ DNA False 2017-01-08 ENCODE 1, 2 ENCFF162YLU, ENCFF207FFX, ENCFF245PJA, ENCFF574XYY 914997230 ENCODE Processing Pipeline dd9df99795afa3037c9056960a7d1374 https://www.encodeproject.org/files/ENCFF260JHC/@@download/ENCFF260JHC.bigWig hg19 released control low read depth, inconsistent platforms ENCFF875ITP bed narrowPeak peaks ENCSR583ACG ChIP-seq EFO:0002067 K562 cell line Homo sapiens BRD4-human ENCAB782ZNQ DNA False 2017-01-08 ENCODE 1 ENCFF207FFX, ENCFF245PJA, ENCFF574XYY 6496431 ENCODE Processing Pipeline 573f75d1fa10e63ede230866edb301d9 https://www.encodeproject.org/files/ENCFF875ITP/@@download/ENCFF875ITP.bed.gz hg19 released control low read depth, inconsistent platforms ENCFF267CBS bed narrowPeak peaks ENCSR583ACG ChIP-seq EFO:0002067 K562 cell line Homo sapiens BRD4-human ENCAB782ZNQ DNA False 2017-01-08 ENCODE 2 ENCFF162YLU, ENCFF245PJA 5987659 ENCODE Processing Pipeline ddfca0067976c24be42533ed23458433 https://www.encodeproject.org/files/ENCFF267CBS/@@download/ENCFF267CBS.bed.gz hg19 released control low read depth, inconsistent platforms ENCFF931WLQ bigBed narrowPeak peaks ENCSR583ACG ChIP-seq EFO:0002067 K562 cell line Homo sapiens BRD4-human ENCAB782ZNQ DNA False 2017-01-08 ENCODE 1 ENCFF875ITP 12995713 ENCODE Processing Pipeline c6ecb19ee08801fe8fc8f62aab40c58a https://www.encodeproject.org/files/ENCFF931WLQ/@@download/ENCFF931WLQ.bigBed hg19 released control low read depth, inconsistent platforms ENCFF714XHL bed narrowPeak optimal idr thresholded peaks ENCSR583ACG ChIP-seq EFO:0002067 K562 cell line Homo sapiens BRD4-human ENCAB782ZNQ DNA False 2017-01-08 ENCODE 1, 2 ENCFF001TDO, ENCFF118EOA, ENCFF267CBS, ENCFF875ITP 153694 ENCODE Processing Pipeline cfcf61727521d15bd154f71181a11674 https://www.encodeproject.org/files/ENCFF714XHL/@@download/ENCFF714XHL.bed.gz hg19 released control low read depth, inconsistent platforms ENCFF119UHG bigBed narrowPeak optimal idr thresholded peaks ENCSR583ACG ChIP-seq EFO:0002067 K562 cell line Homo sapiens BRD4-human ENCAB782ZNQ DNA False 2017-01-08 ENCODE 1, 2 ENCFF714XHL 409637 ENCODE Processing Pipeline a3c1b710d387c12344bd1b0442e2e7ca https://www.encodeproject.org/files/ENCFF119UHG/@@download/ENCFF119UHG.bigBed hg19 released control low read depth, inconsistent platforms ENCFF932ZPG bigBed narrowPeak conservative idr thresholded peaks ENCSR583ACG ChIP-seq EFO:0002067 K562 cell line Homo sapiens BRD4-human ENCAB782ZNQ DNA False 2017-01-08 ENCODE 1, 2 ENCFF868NFS 334469 ENCODE Processing Pipeline 3fcd0ff85e3d17c5dd4ab6af4c887d87 https://www.encodeproject.org/files/ENCFF932ZPG/@@download/ENCFF932ZPG.bigBed hg19 released control low read depth, inconsistent platforms ENCFF825ZCR bed narrowPeak conservative idr thresholded peaks ENCSR583ACG ChIP-seq EFO:0002067 K562 cell line Homo sapiens BRD4-human ENCAB782ZNQ DNA False 2017-01-08 ENCODE 1, 2 ENCFF119IJS, ENCFF191IRT, ENCFF419RSJ, ENCFF884DZX 115699 ENCODE Processing Pipeline 82a72bac4ab2f8aa5d1f0565b3cd2857 https://www.encodeproject.org/files/ENCFF825ZCR/@@download/ENCFF825ZCR.bed.gz GRCh38 released control low read depth, inconsistent platforms ENCFF763XST bigBed narrowPeak peaks ENCSR583ACG ChIP-seq EFO:0002067 K562 cell line Homo sapiens BRD4-human ENCAB782ZNQ DNA False 2017-01-08 ENCODE 1, 2 ENCFF118EOA 8277021 ENCODE Processing Pipeline ef4777c62f0efea4be7ca8c872779da0 https://www.encodeproject.org/files/ENCFF763XST/@@download/ENCFF763XST.bigBed hg19 released control low read depth, inconsistent platforms ENCFF868NFS bed narrowPeak conservative idr thresholded peaks ENCSR583ACG ChIP-seq EFO:0002067 K562 cell line Homo sapiens BRD4-human ENCAB782ZNQ DNA False 2017-01-08 ENCODE 1, 2 ENCFF001TDO, ENCFF118EOA, ENCFF267CBS, ENCFF875ITP 115468 ENCODE Processing Pipeline 50594c6a20322d3d1c79fd80752cd463 https://www.encodeproject.org/files/ENCFF868NFS/@@download/ENCFF868NFS.bed.gz hg19 released control low read depth, inconsistent platforms ENCFF855GPH bigBed narrowPeak peaks ENCSR583ACG ChIP-seq EFO:0002067 K562 cell line Homo sapiens BRD4-human ENCAB782ZNQ DNA False 2017-01-08 ENCODE 2 ENCFF884DZX 13082388 ENCODE Processing Pipeline 91e1ff148709a9f26c590711365d2555 https://www.encodeproject.org/files/ENCFF855GPH/@@download/ENCFF855GPH.bigBed GRCh38 released control low read depth, inconsistent platforms ENCFF885GIF bigBed narrowPeak peaks ENCSR583ACG ChIP-seq EFO:0002067 K562 cell line Homo sapiens BRD4-human ENCAB782ZNQ DNA False 2017-01-08 ENCODE 1, 2 ENCFF119IJS 8289563 ENCODE Processing Pipeline 2d7541e39257984745eb33fe8f881965 https://www.encodeproject.org/files/ENCFF885GIF/@@download/ENCFF885GIF.bigBed GRCh38 released control low read depth, inconsistent platforms ENCFF667QYI bigBed narrowPeak conservative idr thresholded peaks ENCSR583ACG ChIP-seq EFO:0002067 K562 cell line Homo sapiens BRD4-human ENCAB782ZNQ DNA False 2017-01-08 ENCODE 1, 2 ENCFF825ZCR 334836 ENCODE Processing Pipeline 32837bbf19f3f53ea7583e21d291e5e3 https://www.encodeproject.org/files/ENCFF667QYI/@@download/ENCFF667QYI.bigBed GRCh38 released control low read depth, inconsistent platforms ENCFF308TDI bigBed narrowPeak optimal idr thresholded peaks ENCSR583ACG ChIP-seq EFO:0002067 K562 cell line Homo sapiens BRD4-human ENCAB782ZNQ DNA False 2017-01-08 ENCODE 1, 2 ENCFF806CQB 419592 ENCODE Processing Pipeline d0866787e5e4f8fa795d981bc724d2ba https://www.encodeproject.org/files/ENCFF308TDI/@@download/ENCFF308TDI.bigBed GRCh38 released control low read depth, inconsistent platforms ENCFF806CQB bed narrowPeak optimal idr thresholded peaks ENCSR583ACG ChIP-seq EFO:0002067 K562 cell line Homo sapiens BRD4-human ENCAB782ZNQ DNA False 2017-01-08 ENCODE 1, 2 ENCFF119IJS, ENCFF191IRT, ENCFF419RSJ, ENCFF884DZX 158450 ENCODE Processing Pipeline 6c11ae767907b2c40166f00135ee589e https://www.encodeproject.org/files/ENCFF806CQB/@@download/ENCFF806CQB.bed.gz GRCh38 released control low read depth, inconsistent platforms ENCFF143PZO bam unfiltered alignments ENCSR706BJO ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZBTB11-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 50 ENCFF229EAT, ENCFF733OMC, ENCFF807MUK 1778647915 ENCODE Processing Pipeline e5dd649b39bc48ffff030a0705b5639b https://www.encodeproject.org/files/ENCFF143PZO/@@download/ENCFF143PZO.bam hg19 released missing genetic modification characterization ENCFF870GIA bam unfiltered alignments ENCSR706BJO ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZBTB11-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 50 ENCFF112KAJ, ENCFF807MUK, ENCFF848CPR 1789430534 ENCODE Processing Pipeline e06a89f260a18fe4f088e895a1e76063 https://www.encodeproject.org/files/ENCFF870GIA/@@download/ENCFF870GIA.bam hg19 released missing genetic modification characterization ENCFF229EAT fastq reads ENCSR706BJO ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZBTB11-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 1 50 single-ended 846058387 Kevin White, UChicago 5396afa7918ab231f4c99eaebf0ca6a3 SRA:SRR6213927 https://www.encodeproject.org/files/ENCFF229EAT/@@download/ENCFF229EAT.fastq.gz Illumina HiSeq 2500 /files/ENCFF144MPP/, /files/ENCFF299IIG/ released missing genetic modification characterization ENCFF848CPR fastq reads ENCSR706BJO ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZBTB11-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 1 50 single-ended 775760534 Kevin White, UChicago 438a896c4a9766a42d12d73fbea4e8f3 SRA:SRR6213929 https://www.encodeproject.org/files/ENCFF848CPR/@@download/ENCFF848CPR.fastq.gz Illumina HiSeq 2500 /files/ENCFF144MPP/, /files/ENCFF299IIG/ released missing genetic modification characterization ENCFF733OMC fastq reads ENCSR706BJO ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZBTB11-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 1 50 single-ended 960035311 Kevin White, UChicago d964ede028d099b2ae131635922d29a3 SRA:SRR6213928 https://www.encodeproject.org/files/ENCFF733OMC/@@download/ENCFF733OMC.fastq.gz Illumina HiSeq 2500 /files/ENCFF144MPP/, /files/ENCFF299IIG/ released missing genetic modification characterization ENCFF112KAJ fastq reads ENCSR706BJO ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZBTB11-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 1 50 single-ended 1053549467 Kevin White, UChicago 20136bd6b4374c6f3a5241e39cfe114a SRA:SRR6213930 https://www.encodeproject.org/files/ENCFF112KAJ/@@download/ENCFF112KAJ.fastq.gz Illumina HiSeq 2500 /files/ENCFF144MPP/, /files/ENCFF299IIG/ released missing genetic modification characterization ENCFF434TTY bam alignments ENCSR706BJO ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZBTB11-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 50 ENCFF229EAT, ENCFF733OMC, ENCFF807MUK 1137270840 ENCODE Processing Pipeline eb7d86a4e25f61c00480ae998ce6d8db https://www.encodeproject.org/files/ENCFF434TTY/@@download/ENCFF434TTY.bam hg19 released missing genetic modification characterization ENCFF846HRR bam alignments ENCSR706BJO ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZBTB11-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 50 ENCFF112KAJ, ENCFF807MUK, ENCFF848CPR 1122525273 ENCODE Processing Pipeline 7ca796800ed398eafedf3d99b5fb0808 https://www.encodeproject.org/files/ENCFF846HRR/@@download/ENCFF846HRR.bam hg19 released missing genetic modification characterization ENCFF980PLF bigWig signal p-value ENCSR706BJO ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZBTB11-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF359SKD, ENCFF846HRR 691657464 ENCODE Processing Pipeline dd2ae8543f45309ff079eae154a97f48 https://www.encodeproject.org/files/ENCFF980PLF/@@download/ENCFF980PLF.bigWig hg19 released missing genetic modification characterization ENCFF663DLL bigWig signal p-value ENCSR706BJO ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZBTB11-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF359SKD, ENCFF434TTY 531732557 ENCODE Processing Pipeline 66ca2e4f9b225790d8e87b8611b78e82 https://www.encodeproject.org/files/ENCFF663DLL/@@download/ENCFF663DLL.bigWig hg19 released missing genetic modification characterization ENCFF792VMA bigWig signal p-value ENCSR706BJO ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZBTB11-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF359SKD, ENCFF434TTY, ENCFF846HRR 779916179 ENCODE Processing Pipeline 6db3b2e40966dc18f485f8ffb536c812 https://www.encodeproject.org/files/ENCFF792VMA/@@download/ENCFF792VMA.bigWig hg19 released missing genetic modification characterization ENCFF090URM bigWig fold change over control ENCSR706BJO ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZBTB11-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF359SKD, ENCFF434TTY 640021401 ENCODE Processing Pipeline 59e077651dd39ab4a224fb2a253718a4 https://www.encodeproject.org/files/ENCFF090URM/@@download/ENCFF090URM.bigWig hg19 released missing genetic modification characterization ENCFF790XMY bigWig fold change over control ENCSR706BJO ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZBTB11-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF359SKD, ENCFF846HRR 637140553 ENCODE Processing Pipeline 4e658283231b8bc1a6b481e076802f9e https://www.encodeproject.org/files/ENCFF790XMY/@@download/ENCFF790XMY.bigWig hg19 released missing genetic modification characterization ENCFF628WOU bigWig fold change over control ENCSR706BJO ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZBTB11-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF359SKD, ENCFF434TTY, ENCFF846HRR 944623001 ENCODE Processing Pipeline ba6063bc39c5f65f664f980661e06849 https://www.encodeproject.org/files/ENCFF628WOU/@@download/ENCFF628WOU.bigWig hg19 released missing genetic modification characterization ENCFF963CYZ bigBed narrowPeak peaks ENCSR706BJO ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZBTB11-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF999XQG 12510759 ENCODE Processing Pipeline b18786c76caad2d58e6cfd39a14518fa https://www.encodeproject.org/files/ENCFF963CYZ/@@download/ENCFF963CYZ.bigBed hg19 released missing genetic modification characterization ENCFF999XQG bed narrowPeak peaks ENCSR706BJO ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZBTB11-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF359SKD, ENCFF434TTY, ENCFF846HRR 7222742 ENCODE Processing Pipeline ac11c8049c3ce981169abdc6c69c5266 https://www.encodeproject.org/files/ENCFF999XQG/@@download/ENCFF999XQG.bed.gz hg19 released missing genetic modification characterization ENCFF886JOJ bigBed narrowPeak peaks ENCSR706BJO ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZBTB11-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF847LNA 12478999 ENCODE Processing Pipeline b3cbf9bcfce0566b98badc0d8a979822 https://www.encodeproject.org/files/ENCFF886JOJ/@@download/ENCFF886JOJ.bigBed hg19 released missing genetic modification characterization ENCFF847LNA bed narrowPeak peaks ENCSR706BJO ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZBTB11-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF359SKD, ENCFF434TTY 7055585 ENCODE Processing Pipeline 0db6cf378fe8914bdee0eeae2d02fc08 https://www.encodeproject.org/files/ENCFF847LNA/@@download/ENCFF847LNA.bed.gz hg19 released missing genetic modification characterization ENCFF162YHD bed narrowPeak peaks ENCSR706BJO ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZBTB11-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF359SKD, ENCFF846HRR 6911168 ENCODE Processing Pipeline 5e8431bc30b30d1ab3f1b30703317636 https://www.encodeproject.org/files/ENCFF162YHD/@@download/ENCFF162YHD.bed.gz hg19 released missing genetic modification characterization ENCFF397RUN bigBed narrowPeak peaks ENCSR706BJO ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZBTB11-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF162YHD 12666859 ENCODE Processing Pipeline 1f2ae4913dc22ec175ad8fbf06ce9e24 https://www.encodeproject.org/files/ENCFF397RUN/@@download/ENCFF397RUN.bigBed hg19 released missing genetic modification characterization ENCFF289XDI bam unfiltered alignments ENCSR706BJO ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZBTB11-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 50 ENCFF229EAT, ENCFF643CGH, ENCFF733OMC 1783643997 ENCODE Processing Pipeline c011e49de40bd737850b7f6e21f7161f https://www.encodeproject.org/files/ENCFF289XDI/@@download/ENCFF289XDI.bam GRCh38 released missing genetic modification characterization ENCFF532ELN bam unfiltered alignments ENCSR706BJO ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZBTB11-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 50 ENCFF112KAJ, ENCFF643CGH, ENCFF848CPR 1793968673 ENCODE Processing Pipeline 3652fe5e4ebd755aeb6e1d939c750acf https://www.encodeproject.org/files/ENCFF532ELN/@@download/ENCFF532ELN.bam GRCh38 released missing genetic modification characterization ENCFF625AJO bam alignments ENCSR706BJO ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZBTB11-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 50 ENCFF112KAJ, ENCFF643CGH, ENCFF848CPR 1121846726 ENCODE Processing Pipeline 04bb55024787370a563c56352c699332 https://www.encodeproject.org/files/ENCFF625AJO/@@download/ENCFF625AJO.bam GRCh38 released missing genetic modification characterization ENCFF212PQL bam alignments ENCSR706BJO ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZBTB11-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 50 ENCFF229EAT, ENCFF643CGH, ENCFF733OMC 1136641271 ENCODE Processing Pipeline a7efb48f2d739ccebc65ae0d1debf6fd https://www.encodeproject.org/files/ENCFF212PQL/@@download/ENCFF212PQL.bam GRCh38 released missing genetic modification characterization ENCFF621JAH bigWig signal p-value ENCSR706BJO ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZBTB11-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF212PQL, ENCFF623HUN 607843153 ENCODE Processing Pipeline 41852153a1d392498f4d5abbd5bc3088 https://www.encodeproject.org/files/ENCFF621JAH/@@download/ENCFF621JAH.bigWig GRCh38 released missing genetic modification characterization ENCFF917UCD bigWig signal p-value ENCSR706BJO ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZBTB11-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF212PQL, ENCFF623HUN, ENCFF625AJO 759715869 ENCODE Processing Pipeline edef03dc0d64a2d5d907ec633969140d https://www.encodeproject.org/files/ENCFF917UCD/@@download/ENCFF917UCD.bigWig GRCh38 released missing genetic modification characterization ENCFF027SEK bigWig signal p-value ENCSR706BJO ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZBTB11-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF623HUN, ENCFF625AJO 559807948 ENCODE Processing Pipeline 1bfda15e7290d699c0a44ec34a30e46c https://www.encodeproject.org/files/ENCFF027SEK/@@download/ENCFF027SEK.bigWig GRCh38 released missing genetic modification characterization ENCFF912XOE bigWig fold change over control ENCSR706BJO ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZBTB11-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF212PQL, ENCFF623HUN 636147793 ENCODE Processing Pipeline df522ba4472eb21cbbc641491c2e4782 https://www.encodeproject.org/files/ENCFF912XOE/@@download/ENCFF912XOE.bigWig GRCh38 released missing genetic modification characterization ENCFF540IUG bigWig fold change over control ENCSR706BJO ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZBTB11-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF623HUN, ENCFF625AJO 635895344 ENCODE Processing Pipeline 847c111c054759631f64ec23d20dfcf7 https://www.encodeproject.org/files/ENCFF540IUG/@@download/ENCFF540IUG.bigWig GRCh38 released missing genetic modification characterization ENCFF252EGE bigWig fold change over control ENCSR706BJO ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZBTB11-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF212PQL, ENCFF623HUN, ENCFF625AJO 928224652 ENCODE Processing Pipeline 0212d0502b200f3677d5e98bcebe8387 https://www.encodeproject.org/files/ENCFF252EGE/@@download/ENCFF252EGE.bigWig GRCh38 released missing genetic modification characterization ENCFF510ADW bed narrowPeak peaks ENCSR706BJO ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZBTB11-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF623HUN, ENCFF625AJO 6782293 ENCODE Processing Pipeline 47ede8ef0305a9fa5069bca691edac59 https://www.encodeproject.org/files/ENCFF510ADW/@@download/ENCFF510ADW.bed.gz GRCh38 released missing genetic modification characterization ENCFF173ZKN bigBed narrowPeak peaks ENCSR706BJO ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZBTB11-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF493OQN 12477238 ENCODE Processing Pipeline 518e758a4245b21969734bdcee7ae655 https://www.encodeproject.org/files/ENCFF173ZKN/@@download/ENCFF173ZKN.bigBed GRCh38 released missing genetic modification characterization ENCFF493OQN bed narrowPeak peaks ENCSR706BJO ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZBTB11-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF212PQL, ENCFF623HUN 6946617 ENCODE Processing Pipeline 640db242d5014dd676fe5228665a3c03 https://www.encodeproject.org/files/ENCFF493OQN/@@download/ENCFF493OQN.bed.gz GRCh38 released missing genetic modification characterization ENCFF840JEL bed narrowPeak peaks ENCSR706BJO ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZBTB11-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF212PQL, ENCFF623HUN, ENCFF625AJO 7172738 ENCODE Processing Pipeline 7fdaf73dec2588017747b7ebf26013c6 https://www.encodeproject.org/files/ENCFF840JEL/@@download/ENCFF840JEL.bed.gz GRCh38 released missing genetic modification characterization ENCFF141SHL bigBed narrowPeak peaks ENCSR706BJO ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZBTB11-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF510ADW 12670824 ENCODE Processing Pipeline b6fb1d5e1e4e8a17526792342891451a https://www.encodeproject.org/files/ENCFF141SHL/@@download/ENCFF141SHL.bigBed GRCh38 released missing genetic modification characterization ENCFF858JAP bigBed narrowPeak peaks ENCSR706BJO ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZBTB11-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF840JEL 12516709 ENCODE Processing Pipeline 4881606a3b625c73d04db55fe849fd56 https://www.encodeproject.org/files/ENCFF858JAP/@@download/ENCFF858JAP.bigBed GRCh38 released missing genetic modification characterization ENCFF563MXX bed narrowPeak conservative idr thresholded peaks ENCSR706BJO ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZBTB11-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF419RSJ, ENCFF493OQN, ENCFF510ADW, ENCFF840JEL 484088 ENCODE Processing Pipeline 6003362bcf68caf68da850dc025b97a7 https://www.encodeproject.org/files/ENCFF563MXX/@@download/ENCFF563MXX.bed.gz GRCh38 released missing genetic modification characterization ENCFF885HDN bigBed narrowPeak conservative idr thresholded peaks ENCSR706BJO ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZBTB11-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF563MXX 1027531 ENCODE Processing Pipeline fa1acc4491f5c107c73fc6057a893e55 https://www.encodeproject.org/files/ENCFF885HDN/@@download/ENCFF885HDN.bigBed GRCh38 released missing genetic modification characterization ENCFF042OZE bed narrowPeak optimal idr thresholded peaks ENCSR706BJO ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZBTB11-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF419RSJ, ENCFF493OQN, ENCFF510ADW, ENCFF840JEL 493827 ENCODE Processing Pipeline e79bd92c88ae067d27e3ebe933885b20 https://www.encodeproject.org/files/ENCFF042OZE/@@download/ENCFF042OZE.bed.gz GRCh38 released missing genetic modification characterization ENCFF655QVI bigBed narrowPeak optimal idr thresholded peaks ENCSR706BJO ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZBTB11-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF042OZE 1043450 ENCODE Processing Pipeline 169680ef86df4d6cdc3063873a7a4e77 https://www.encodeproject.org/files/ENCFF655QVI/@@download/ENCFF655QVI.bigBed GRCh38 released missing genetic modification characterization ENCFF624CZP bed narrowPeak conservative idr thresholded peaks ENCSR706BJO ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZBTB11-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF001TDO, ENCFF162YHD, ENCFF847LNA, ENCFF999XQG 412446 ENCODE Processing Pipeline 692d1e44ddcd7058604d10ceae315d5e https://www.encodeproject.org/files/ENCFF624CZP/@@download/ENCFF624CZP.bed.gz hg19 released missing genetic modification characterization ENCFF462JFW bed narrowPeak optimal idr thresholded peaks ENCSR706BJO ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZBTB11-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF001TDO, ENCFF162YHD, ENCFF847LNA, ENCFF999XQG 421045 ENCODE Processing Pipeline cbf4d9f37773b9077321587efc291d1d https://www.encodeproject.org/files/ENCFF462JFW/@@download/ENCFF462JFW.bed.gz hg19 released missing genetic modification characterization ENCFF537TEI bigBed narrowPeak optimal idr thresholded peaks ENCSR706BJO ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZBTB11-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF462JFW 757339 ENCODE Processing Pipeline cf685113575ebd8b939f15b9ae870262 https://www.encodeproject.org/files/ENCFF537TEI/@@download/ENCFF537TEI.bigBed hg19 released missing genetic modification characterization ENCFF086SYT bigBed narrowPeak conservative idr thresholded peaks ENCSR706BJO ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZBTB11-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF624CZP 746284 ENCODE Processing Pipeline 066eea773e8cd5c5ee450a1b3f7e761f https://www.encodeproject.org/files/ENCFF086SYT/@@download/ENCFF086SYT.bigBed hg19 released missing genetic modification characterization ENCFF000BVD bigBed broadPeak peaks ENCSR000ATV ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX3-human ENCAB000AEW DNA see document see document False 2012-08-06 ENCODE ENCFF001SYW 1085024 Bradley Bernstein, Broad dfc64e220c106c953bcac8f12a6ad95f https://www.encodeproject.org/files/ENCFF000BVD/@@download/ENCFF000BVD.bigBed hg19 archived control low read depth, inconsistent platforms, low read length ENCFF000BVE bigWig signal ENCSR000ATV ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX3-human ENCAB000AEW DNA see document see document False 2012-08-06 ENCODE 454769864 Bradley Bernstein, Broad 09712edcc6763ba2548ff9027455894b https://www.encodeproject.org/files/ENCFF000BVE/@@download/ENCFF000BVE.bigWig hg19 archived control low read depth, inconsistent platforms, low read length missing derived_from ENCFF000BVF bam alignments ENCSR000ATV ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX3-human ENCAB000AEW DNA see document see document False 2012-08-06 ENCODE 1 ENCFF000BVP 1423387544 Bradley Bernstein, Broad 0e7c7c89396980b631e97dc9b600868e https://www.encodeproject.org/files/ENCFF000BVF/@@download/ENCFF000BVF.bam hg19 archived control low read depth, inconsistent platforms, low read length ENCFF000BVP fastq reads ENCSR000ATV ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX3-human ENCAB000AEW DNA see document see document False 2012-08-06 ENCODE 1 1 36 single-ended 1552343612 Bradley Bernstein, Broad 4a46e7f60690af6788ed1db5b8f6cbb8 https://www.encodeproject.org/files/ENCFF000BVP/@@download/ENCFF000BVP.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000BWK/ released control low read depth, inconsistent platforms, low read length ENCFF001SYW bed broadPeak peaks ENCSR000ATV ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX3-human ENCAB000AEW DNA see document see document False 2012-08-06 ENCODE 614924 Bradley Bernstein, Broad 334bfb72b3e91de1d8966cfe7487839d https://www.encodeproject.org/files/ENCFF001SYW/@@download/ENCFF001SYW.bed.gz hg19 archived control low read depth, inconsistent platforms, low read length missing derived_from ENCFF047TCZ bam unfiltered alignments ENCSR000ATV ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX3-human ENCAB000AEW DNA see document see document False 2012-08-06 ENCODE 1 36 ENCFF000BVP, ENCFF807MUK 2019164211 ENCODE Processing Pipeline ef7535ee713a40b920de070d1a628d4a https://www.encodeproject.org/files/ENCFF047TCZ/@@download/ENCFF047TCZ.bam hg19 released control low read depth, inconsistent platforms, low read length ENCFF614QMP bam alignments ENCSR000ATV ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX3-human ENCAB000AEW DNA see document see document False 2012-08-06 ENCODE 1 36 ENCFF000BVP, ENCFF807MUK 1123399603 ENCODE Processing Pipeline c8d1f49f715cbb6d3b1a1b01669a3393 https://www.encodeproject.org/files/ENCFF614QMP/@@download/ENCFF614QMP.bam hg19 released control low read depth, inconsistent platforms, low read length ENCFF074DXA bam unfiltered alignments ENCSR000ATV ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX3-human ENCAB000AEW DNA see document see document False 2012-08-06 ENCODE 1 36 ENCFF000BVP, ENCFF643CGH 2037600807 ENCODE Processing Pipeline 5071689e69c9773d068a2c4558d77e05 https://www.encodeproject.org/files/ENCFF074DXA/@@download/ENCFF074DXA.bam GRCh38 released control low read depth, inconsistent platforms, low read length ENCFF822UJU bam alignments ENCSR000ATV ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX3-human ENCAB000AEW DNA see document see document False 2012-08-06 ENCODE 1 36 ENCFF000BVP, ENCFF643CGH 1123168788 ENCODE Processing Pipeline f840b1baa32995d99bee414d95e5d253 https://www.encodeproject.org/files/ENCFF822UJU/@@download/ENCFF822UJU.bam GRCh38 released control low read depth, inconsistent platforms, low read length ENCFF952ESR bigWig fold change over control ENCSR000ATV ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX3-human ENCAB000AEW DNA see document see document False 2012-08-06 ENCODE 1 ENCFF392XRJ, ENCFF822UJU 410681348 ENCODE Processing Pipeline 966fd5d00397cbc373e5d6e1a7ff2185 https://www.encodeproject.org/files/ENCFF952ESR/@@download/ENCFF952ESR.bigWig GRCh38 released control low read depth, inconsistent platforms, low read length ENCFF384UNM bigBed narrowPeak peaks ENCSR000ATV ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX3-human ENCAB000AEW DNA see document see document False 2012-08-06 ENCODE 1 ENCFF944XCG 10939287 ENCODE Processing Pipeline 26b65de17edc81594bedb7f6fc49940c https://www.encodeproject.org/files/ENCFF384UNM/@@download/ENCFF384UNM.bigBed GRCh38 released control low read depth, inconsistent platforms, low read length ENCFF243GHK bigWig signal p-value ENCSR000ATV ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX3-human ENCAB000AEW DNA see document see document False 2012-08-06 ENCODE 1 ENCFF574XYY, ENCFF614QMP 363066948 ENCODE Processing Pipeline 81a544caa78af132d5af53e32f0e8309 https://www.encodeproject.org/files/ENCFF243GHK/@@download/ENCFF243GHK.bigWig hg19 released control low read depth, inconsistent platforms, low read length ENCFF358INE bigWig fold change over control ENCSR000ATV ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX3-human ENCAB000AEW DNA see document see document False 2012-08-06 ENCODE 1 ENCFF574XYY, ENCFF614QMP 411482497 ENCODE Processing Pipeline 64f8e2bf7d77ab4c0519a7c626fb7bda https://www.encodeproject.org/files/ENCFF358INE/@@download/ENCFF358INE.bigWig hg19 released control low read depth, inconsistent platforms, low read length ENCFF447BDZ bigBed narrowPeak peaks ENCSR000ATV ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX3-human ENCAB000AEW DNA see document see document False 2012-08-06 ENCODE 1 ENCFF397GWD 10935676 ENCODE Processing Pipeline 6c278757c8922e3dddd631cde649d173 https://www.encodeproject.org/files/ENCFF447BDZ/@@download/ENCFF447BDZ.bigBed hg19 released control low read depth, inconsistent platforms, low read length ENCFF956TND bigBed narrowPeak pseudoreplicated idr thresholded peaks ENCSR000ATV ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX3-human ENCAB000AEW DNA see document see document False 2012-08-06 ENCODE 1 ENCFF005BKP 106900 ENCODE Processing Pipeline 532488e34eebba09b35e766ed0157e3f https://www.encodeproject.org/files/ENCFF956TND/@@download/ENCFF956TND.bigBed hg19 released control low read depth, inconsistent platforms, low read length ENCFF397GWD bed narrowPeak peaks ENCSR000ATV ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX3-human ENCAB000AEW DNA see document see document False 2012-08-06 ENCODE 1 ENCFF574XYY, ENCFF614QMP 4495477 ENCODE Processing Pipeline e8e09d5d180d98eb388d73ab00363db8 https://www.encodeproject.org/files/ENCFF397GWD/@@download/ENCFF397GWD.bed.gz hg19 released control low read depth, inconsistent platforms, low read length ENCFF005BKP bed narrowPeak pseudoreplicated idr thresholded peaks ENCSR000ATV ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX3-human ENCAB000AEW DNA see document see document False 2012-08-06 ENCODE 1 ENCFF001TDO, ENCFF397GWD 21114 ENCODE Processing Pipeline 6a23d25330cdaca62d2a1a30cc22ce97 https://www.encodeproject.org/files/ENCFF005BKP/@@download/ENCFF005BKP.bed.gz hg19 released control low read depth, inconsistent platforms, low read length ENCFF944XCG bed narrowPeak peaks ENCSR000ATV ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX3-human ENCAB000AEW DNA see document see document False 2012-08-06 ENCODE 1 ENCFF392XRJ, ENCFF822UJU 4450989 ENCODE Processing Pipeline 859e4ae8a6825885dfcabce89f47956a https://www.encodeproject.org/files/ENCFF944XCG/@@download/ENCFF944XCG.bed.gz GRCh38 released control low read depth, inconsistent platforms, low read length ENCFF378YKS bed narrowPeak pseudoreplicated idr thresholded peaks ENCSR000ATV ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX3-human ENCAB000AEW DNA see document see document False 2012-08-06 ENCODE 1 ENCFF419RSJ, ENCFF944XCG 21280 ENCODE Processing Pipeline 6eea803e644af5d23ecc1feaf1ee3488 https://www.encodeproject.org/files/ENCFF378YKS/@@download/ENCFF378YKS.bed.gz GRCh38 released control low read depth, inconsistent platforms, low read length ENCFF217KSM bigWig signal p-value ENCSR000ATV ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX3-human ENCAB000AEW DNA see document see document False 2012-08-06 ENCODE 1 ENCFF392XRJ, ENCFF822UJU 362835966 ENCODE Processing Pipeline b781d8d908c9956307431070779d3148 https://www.encodeproject.org/files/ENCFF217KSM/@@download/ENCFF217KSM.bigWig GRCh38 released control low read depth, inconsistent platforms, low read length ENCFF097KWJ bigBed narrowPeak pseudoreplicated idr thresholded peaks ENCSR000ATV ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX3-human ENCAB000AEW DNA see document see document False 2012-08-06 ENCODE 1 ENCFF378YKS 110073 ENCODE Processing Pipeline 194f178c19b06d171a0a3a6a846b9ed7 https://www.encodeproject.org/files/ENCFF097KWJ/@@download/ENCFF097KWJ.bigBed GRCh38 released control low read depth, inconsistent platforms, low read length ENCFF000CBN bigBed broadPeak peaks ENCSR000ATM ChIP-seq EFO:0002067 K562 cell line Homo sapiens REST-human ENCAB000AKI, ENCAB584CZQ, ENCAB937ZMF DNA see document see document False 2012-08-06 ENCODE ENCFF001TAA 370678 Bradley Bernstein, Broad aeeea5dfb58dac6663c1340b97a6c382 https://www.encodeproject.org/files/ENCFF000CBN/@@download/ENCFF000CBN.bigBed hg19 released mixed read lengths, inconsistent platforms, low read length ENCFF000CBO bam alignments ENCSR000ATM ChIP-seq EFO:0002067 K562 cell line Homo sapiens REST-human ENCAB000AKI, ENCAB584CZQ, ENCAB937ZMF DNA see document see document False 2012-08-06 ENCODE 1 ENCFF001QXC 1267294707 Bradley Bernstein, Broad bfc4664b64b4577b6e9c3a72b28c6582 https://www.encodeproject.org/files/ENCFF000CBO/@@download/ENCFF000CBO.bam hg19 released mixed read lengths, inconsistent platforms, low read length ENCFF000CBP bigWig signal ENCSR000ATM ChIP-seq EFO:0002067 K562 cell line Homo sapiens REST-human ENCAB000AKI, ENCAB584CZQ, ENCAB937ZMF DNA see document see document False 2012-08-06 ENCODE 176671597 Bradley Bernstein, Broad 912777f952f2b15f58c9ea8979f8b1e3 https://www.encodeproject.org/files/ENCFF000CBP/@@download/ENCFF000CBP.bigWig hg19 released mixed read lengths, inconsistent platforms, low read length missing derived_from ENCFF001QXC fastq reads ENCSR000ATM ChIP-seq EFO:0002067 K562 cell line Homo sapiens REST-human ENCAB000AKI, ENCAB584CZQ, ENCAB937ZMF DNA see document see document False 2012-08-06 ENCODE 1 1 36 single-ended 1311114267 Bradley Bernstein, Broad 4cfa6e098964b2a94a2cd2c15284cd46 https://www.encodeproject.org/files/ENCFF001QXC/@@download/ENCFF001QXC.fastq.gz Illumina HiSeq 2000 /files/ENCFF000BWK/ released mixed read lengths, inconsistent platforms, low read length ENCFF001TAA bed broadPeak peaks ENCSR000ATM ChIP-seq EFO:0002067 K562 cell line Homo sapiens REST-human ENCAB000AKI, ENCAB584CZQ, ENCAB937ZMF DNA see document see document False 2012-08-06 ENCODE 225186 Bradley Bernstein, Broad 00475f060154db0d5022ee945cd3054e https://www.encodeproject.org/files/ENCFF001TAA/@@download/ENCFF001TAA.bed.gz hg19 released mixed read lengths, inconsistent platforms, low read length missing derived_from ENCFF809VCA fastq reads ENCSR000ATM ChIP-seq EFO:0002067 K562 cell line Homo sapiens REST-human ENCAB000AKI, ENCAB584CZQ, ENCAB937ZMF DNA see document see document False 2012-08-06 ENCODE 2 1 76 single-ended 1653521164 Bradley Bernstein, Broad 114d7cf666d98d7257aeebe47358ba96 https://www.encodeproject.org/files/ENCFF809VCA/@@download/ENCFF809VCA.fastq.gz Illumina HiSeq 2500 released mixed read lengths, inconsistent platforms, low read length missing controlled_by ENCFF688MOZ fastq reads ENCSR000ATM ChIP-seq EFO:0002067 K562 cell line Homo sapiens REST-human ENCAB000AKI, ENCAB584CZQ, ENCAB937ZMF DNA see document see document False 2012-08-06 ENCODE 3 1 36 single-ended 273177010 Bradley Bernstein, Broad 845477c4d2dcd794f448ef04cb1820e4 https://www.encodeproject.org/files/ENCFF688MOZ/@@download/ENCFF688MOZ.fastq.gz Illumina HiSeq 2500 released mixed read lengths, inconsistent platforms, low read length missing controlled_by ENCFF552ETP fastq reads ENCSR547LKC ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATAD2B-human ENCAB939ONI DNA False 2017-05-17 ENCODE 2 1 100 paired-ended 1 ENCFF523ULM 3326848099 Michael Snyder, Stanford f9088ca92f7b23763959856416b76d40 SRA:SRR6213690 https://www.encodeproject.org/files/ENCFF552ETP/@@download/ENCFF552ETP.fastq.gz Illumina HiSeq 4000 /files/ENCFF259GQA/ released borderline replicate concordance, mild to moderate bottlenecking missing control alignments ENCFF523ULM fastq reads ENCSR547LKC ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATAD2B-human ENCAB939ONI DNA False 2017-05-17 ENCODE 2 1 100 paired-ended 2 ENCFF552ETP 3931481310 Michael Snyder, Stanford 236b200e9c6047b628e5b0a011b66431 SRA:SRR6213690 https://www.encodeproject.org/files/ENCFF523ULM/@@download/ENCFF523ULM.fastq.gz Illumina HiSeq 4000 /files/ENCFF837MIV/ released borderline replicate concordance, mild to moderate bottlenecking missing control alignments ENCFF489DPL fastq reads ENCSR547LKC ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATAD2B-human ENCAB939ONI DNA False 2017-05-17 ENCODE 1 1 100 paired-ended 1 ENCFF999EFL 2844442638 Michael Snyder, Stanford a1b3bd91365380ebfa3c9a39d55dcf11 SRA:SRR6213691 https://www.encodeproject.org/files/ENCFF489DPL/@@download/ENCFF489DPL.fastq.gz Illumina HiSeq 4000 /files/ENCFF498JMO/ released borderline replicate concordance, mild to moderate bottlenecking missing control alignments ENCFF999EFL fastq reads ENCSR547LKC ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATAD2B-human ENCAB939ONI DNA False 2017-05-17 ENCODE 1 1 100 paired-ended 2 ENCFF489DPL 3175212177 Michael Snyder, Stanford 5b804ddbe311e996e28a96735c868f0a SRA:SRR6213691 https://www.encodeproject.org/files/ENCFF999EFL/@@download/ENCFF999EFL.fastq.gz Illumina HiSeq 4000 /files/ENCFF502GTS/ released borderline replicate concordance, mild to moderate bottlenecking missing control alignments ENCFF039TEF bam unfiltered alignments ENCSR547LKC ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATAD2B-human ENCAB939ONI DNA False 2017-05-17 ENCODE 1 100 ENCFF489DPL, ENCFF807MUK, ENCFF999EFL 5742148165 ENCODE Processing Pipeline 8472fdd109e9532f50436664ebd3d5e5 https://www.encodeproject.org/files/ENCFF039TEF/@@download/ENCFF039TEF.bam hg19 released borderline replicate concordance, mild to moderate bottlenecking missing control alignments ENCFF204LAC bam unfiltered alignments ENCSR547LKC ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATAD2B-human ENCAB939ONI DNA False 2017-05-17 ENCODE 1 100 ENCFF489DPL, ENCFF643CGH, ENCFF999EFL 5748608400 ENCODE Processing Pipeline ea80290943c2f0c95e997e0b45a157a6 https://www.encodeproject.org/files/ENCFF204LAC/@@download/ENCFF204LAC.bam GRCh38 released borderline replicate concordance, mild to moderate bottlenecking missing control alignments ENCFF666OMD bam unfiltered alignments ENCSR547LKC ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATAD2B-human ENCAB939ONI DNA False 2017-05-17 ENCODE 2 100 ENCFF523ULM, ENCFF552ETP, ENCFF807MUK 6721145257 ENCODE Processing Pipeline 31bc759102872250c44093f20a94da9d https://www.encodeproject.org/files/ENCFF666OMD/@@download/ENCFF666OMD.bam hg19 released borderline replicate concordance, mild to moderate bottlenecking missing control alignments ENCFF505PWS bam unfiltered alignments ENCSR547LKC ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATAD2B-human ENCAB939ONI DNA False 2017-05-17 ENCODE 2 100 ENCFF523ULM, ENCFF552ETP, ENCFF643CGH 6727088161 ENCODE Processing Pipeline 57f13b6f7a8ba7cbe67a483b26fb64eb https://www.encodeproject.org/files/ENCFF505PWS/@@download/ENCFF505PWS.bam GRCh38 released borderline replicate concordance, mild to moderate bottlenecking missing control alignments ENCFF918JWJ bam alignments ENCSR547LKC ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATAD2B-human ENCAB939ONI DNA False 2017-05-17 ENCODE 1 100 ENCFF489DPL, ENCFF643CGH, ENCFF999EFL 4736900055 ENCODE Processing Pipeline 200d1ae82bc394deb13451661e4f4d14 https://www.encodeproject.org/files/ENCFF918JWJ/@@download/ENCFF918JWJ.bam GRCh38 released borderline replicate concordance, mild to moderate bottlenecking missing control alignments ENCFF033PRP bam alignments ENCSR547LKC ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATAD2B-human ENCAB939ONI DNA False 2017-05-17 ENCODE 1 100 ENCFF489DPL, ENCFF807MUK, ENCFF999EFL 4734403641 ENCODE Processing Pipeline 6fd95bebbabf4a1020edcf8cd37a61f0 https://www.encodeproject.org/files/ENCFF033PRP/@@download/ENCFF033PRP.bam hg19 released borderline replicate concordance, mild to moderate bottlenecking missing control alignments ENCFF877LYM bam alignments ENCSR547LKC ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATAD2B-human ENCAB939ONI DNA False 2017-05-17 ENCODE 2 100 ENCFF523ULM, ENCFF552ETP, ENCFF807MUK 5237793483 ENCODE Processing Pipeline 1898399971e3e1a35d441953721dc9a9 https://www.encodeproject.org/files/ENCFF877LYM/@@download/ENCFF877LYM.bam hg19 released borderline replicate concordance, mild to moderate bottlenecking missing control alignments ENCFF580EBG bam alignments ENCSR547LKC ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATAD2B-human ENCAB939ONI DNA False 2017-05-17 ENCODE 2 100 ENCFF523ULM, ENCFF552ETP, ENCFF643CGH 5241107195 ENCODE Processing Pipeline 7ce628aeb9d8de5bc33788e40848a2f2 https://www.encodeproject.org/files/ENCFF580EBG/@@download/ENCFF580EBG.bam GRCh38 released borderline replicate concordance, mild to moderate bottlenecking missing control alignments ENCFF448GAD bigWig signal p-value ENCSR547LKC ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATAD2B-human ENCAB939ONI DNA False 2017-05-17 ENCODE 1, 2 ENCFF580EBG, ENCFF918JWJ 2489062626 ENCODE Processing Pipeline 64f0dfade05ae1b0632a5c32b505dd9e https://www.encodeproject.org/files/ENCFF448GAD/@@download/ENCFF448GAD.bigWig GRCh38 released borderline replicate concordance, mild to moderate bottlenecking missing control alignments ENCFF146BPL bigBed narrowPeak peaks ENCSR547LKC ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATAD2B-human ENCAB939ONI DNA False 2017-05-17 ENCODE 2 ENCFF361CLP 13270647 ENCODE Processing Pipeline c07a2bbc1bbbaddeb0daae46fd285b18 https://www.encodeproject.org/files/ENCFF146BPL/@@download/ENCFF146BPL.bigBed GRCh38 released borderline replicate concordance, mild to moderate bottlenecking missing control alignments ENCFF569CMJ bed narrowPeak optimal idr thresholded peaks ENCSR547LKC ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATAD2B-human ENCAB939ONI DNA False 2017-05-17 ENCODE 1, 2 ENCFF361CLP, ENCFF419RSJ, ENCFF593CDN, ENCFF864WDT 260548 ENCODE Processing Pipeline 9e55a5f7b19f75666b38def9aef21a8e https://www.encodeproject.org/files/ENCFF569CMJ/@@download/ENCFF569CMJ.bed.gz GRCh38 released borderline replicate concordance, mild to moderate bottlenecking missing control alignments ENCFF125PRJ bigWig signal p-value ENCSR547LKC ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATAD2B-human ENCAB939ONI DNA False 2017-05-17 ENCODE 1 ENCFF918JWJ 1351546197 ENCODE Processing Pipeline a0bdfa78539d20982e412d626a80cc6d https://www.encodeproject.org/files/ENCFF125PRJ/@@download/ENCFF125PRJ.bigWig GRCh38 released borderline replicate concordance, mild to moderate bottlenecking missing control alignments ENCFF728KQG bigBed narrowPeak conservative idr thresholded peaks ENCSR547LKC ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATAD2B-human ENCAB939ONI DNA False 2017-05-17 ENCODE 1, 2 ENCFF334TMJ 431273 ENCODE Processing Pipeline 5d2499ed82dbfaacc4644f88c9332f6b https://www.encodeproject.org/files/ENCFF728KQG/@@download/ENCFF728KQG.bigBed GRCh38 released borderline replicate concordance, mild to moderate bottlenecking missing control alignments ENCFF143LIN bigBed narrowPeak optimal idr thresholded peaks ENCSR547LKC ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATAD2B-human ENCAB939ONI DNA False 2017-05-17 ENCODE 1, 2 ENCFF569CMJ 573706 ENCODE Processing Pipeline 2a706e55d9e33cc5b9d27d08d8663149 https://www.encodeproject.org/files/ENCFF143LIN/@@download/ENCFF143LIN.bigBed GRCh38 released borderline replicate concordance, mild to moderate bottlenecking missing control alignments ENCFF696MYD bigWig fold change over control ENCSR547LKC ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATAD2B-human ENCAB939ONI DNA False 2017-05-17 ENCODE 1 ENCFF918JWJ 1465704419 ENCODE Processing Pipeline bb11557d718c0e5c5e54e3ac6a100f00 https://www.encodeproject.org/files/ENCFF696MYD/@@download/ENCFF696MYD.bigWig GRCh38 released borderline replicate concordance, mild to moderate bottlenecking missing control alignments ENCFF035IBD bigWig fold change over control ENCSR547LKC ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATAD2B-human ENCAB939ONI DNA False 2017-05-17 ENCODE 1, 2 ENCFF580EBG, ENCFF918JWJ 2567222659 ENCODE Processing Pipeline 5da4316db8deb5716bbe05f7a8f999df https://www.encodeproject.org/files/ENCFF035IBD/@@download/ENCFF035IBD.bigWig GRCh38 released borderline replicate concordance, mild to moderate bottlenecking missing control alignments ENCFF239WZL bigBed narrowPeak peaks ENCSR547LKC ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATAD2B-human ENCAB939ONI DNA False 2017-05-17 ENCODE 1 ENCFF593CDN 11097914 ENCODE Processing Pipeline 2a83e4e1e18f496798eec4bbe46d151d https://www.encodeproject.org/files/ENCFF239WZL/@@download/ENCFF239WZL.bigBed GRCh38 released borderline replicate concordance, mild to moderate bottlenecking missing control alignments ENCFF334TMJ bed narrowPeak conservative idr thresholded peaks ENCSR547LKC ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATAD2B-human ENCAB939ONI DNA False 2017-05-17 ENCODE 1, 2 ENCFF361CLP, ENCFF419RSJ, ENCFF593CDN, ENCFF864WDT 175805 ENCODE Processing Pipeline bc3939472acde74db4d78fcc9038dce9 https://www.encodeproject.org/files/ENCFF334TMJ/@@download/ENCFF334TMJ.bed.gz GRCh38 released borderline replicate concordance, mild to moderate bottlenecking missing control alignments ENCFF633WKB bigWig signal p-value ENCSR547LKC ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATAD2B-human ENCAB939ONI DNA False 2017-05-17 ENCODE 2 ENCFF580EBG 1957449792 ENCODE Processing Pipeline b9edf789fc7d1133eef007b77a068015 https://www.encodeproject.org/files/ENCFF633WKB/@@download/ENCFF633WKB.bigWig GRCh38 released borderline replicate concordance, mild to moderate bottlenecking missing control alignments ENCFF097RBW bigWig fold change over control ENCSR547LKC ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATAD2B-human ENCAB939ONI DNA False 2017-05-17 ENCODE 2 ENCFF580EBG 1997916881 ENCODE Processing Pipeline 1ad1eed10a9232b73564dd5150227137 https://www.encodeproject.org/files/ENCFF097RBW/@@download/ENCFF097RBW.bigWig GRCh38 released borderline replicate concordance, mild to moderate bottlenecking missing control alignments ENCFF593CDN bed narrowPeak peaks ENCSR547LKC ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATAD2B-human ENCAB939ONI DNA False 2017-05-17 ENCODE 1 ENCFF918JWJ 6718788 ENCODE Processing Pipeline 2e670a4fc1a5d394878d47acdf6eb2bf https://www.encodeproject.org/files/ENCFF593CDN/@@download/ENCFF593CDN.bed.gz GRCh38 released borderline replicate concordance, mild to moderate bottlenecking missing control alignments ENCFF361CLP bed narrowPeak peaks ENCSR547LKC ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATAD2B-human ENCAB939ONI DNA False 2017-05-17 ENCODE 2 ENCFF580EBG 7034903 ENCODE Processing Pipeline f15a4e75910d0f34ddffe35443a1d781 https://www.encodeproject.org/files/ENCFF361CLP/@@download/ENCFF361CLP.bed.gz GRCh38 released borderline replicate concordance, mild to moderate bottlenecking missing control alignments ENCFF864WDT bed narrowPeak peaks ENCSR547LKC ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATAD2B-human ENCAB939ONI DNA False 2017-05-17 ENCODE 1, 2 ENCFF580EBG, ENCFF918JWJ 7258990 ENCODE Processing Pipeline b5ac94e5c1237396436464505a36d550 https://www.encodeproject.org/files/ENCFF864WDT/@@download/ENCFF864WDT.bed.gz GRCh38 released borderline replicate concordance, mild to moderate bottlenecking missing control alignments ENCFF869ERM bigBed narrowPeak peaks ENCSR547LKC ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATAD2B-human ENCAB939ONI DNA False 2017-05-17 ENCODE 1, 2 ENCFF864WDT 13078886 ENCODE Processing Pipeline 7b08caf5263089a67389568663c0118b https://www.encodeproject.org/files/ENCFF869ERM/@@download/ENCFF869ERM.bigBed GRCh38 released borderline replicate concordance, mild to moderate bottlenecking missing control alignments ENCFF228FIP bigWig signal p-value ENCSR547LKC ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATAD2B-human ENCAB939ONI DNA False 2017-05-17 ENCODE 1, 2 ENCFF033PRP, ENCFF160VXC, ENCFF834TUP, ENCFF877LYM 2444058069 ENCODE Processing Pipeline 3489f2da5696d1c97b00877542186185 https://www.encodeproject.org/files/ENCFF228FIP/@@download/ENCFF228FIP.bigWig hg19 released borderline replicate concordance, mild to moderate bottlenecking missing control alignments ENCFF306CVU bigWig signal p-value ENCSR547LKC ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATAD2B-human ENCAB939ONI DNA False 2017-05-17 ENCODE 1 ENCFF033PRP, ENCFF160VXC 1256506740 ENCODE Processing Pipeline 58ac17898c0ce7565777df8750aa2ae0 https://www.encodeproject.org/files/ENCFF306CVU/@@download/ENCFF306CVU.bigWig hg19 released borderline replicate concordance, mild to moderate bottlenecking missing control alignments ENCFF583ALU bigWig fold change over control ENCSR547LKC ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATAD2B-human ENCAB939ONI DNA False 2017-05-17 ENCODE 1 ENCFF033PRP, ENCFF160VXC 1476358104 ENCODE Processing Pipeline 843d33e5493b2f3a33bb10ee30a48c85 https://www.encodeproject.org/files/ENCFF583ALU/@@download/ENCFF583ALU.bigWig hg19 released borderline replicate concordance, mild to moderate bottlenecking missing control alignments ENCFF418WIA bed narrowPeak peaks ENCSR547LKC ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATAD2B-human ENCAB939ONI DNA False 2017-05-17 ENCODE 2 ENCFF160VXC, ENCFF834TUP, ENCFF877LYM 7030043 ENCODE Processing Pipeline 548036a1564917488e5a98e4507384f0 https://www.encodeproject.org/files/ENCFF418WIA/@@download/ENCFF418WIA.bed.gz hg19 released borderline replicate concordance, mild to moderate bottlenecking missing control alignments ENCFF549KOD bed narrowPeak optimal idr thresholded peaks ENCSR547LKC ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATAD2B-human ENCAB939ONI DNA False 2017-05-17 ENCODE 1, 2 ENCFF001TDO, ENCFF198CPZ, ENCFF418WIA, ENCFF849HOO 250332 ENCODE Processing Pipeline 4c6d59eb2d9fee9bb959881542988713 https://www.encodeproject.org/files/ENCFF549KOD/@@download/ENCFF549KOD.bed.gz hg19 released borderline replicate concordance, mild to moderate bottlenecking missing control alignments ENCFF586PNH bigWig signal p-value ENCSR547LKC ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATAD2B-human ENCAB939ONI DNA False 2017-05-17 ENCODE 2 ENCFF160VXC, ENCFF834TUP, ENCFF877LYM 1979663194 ENCODE Processing Pipeline 1be00b1802750c13d27ad46a08af623b https://www.encodeproject.org/files/ENCFF586PNH/@@download/ENCFF586PNH.bigWig hg19 released borderline replicate concordance, mild to moderate bottlenecking missing control alignments ENCFF434EKV bigWig fold change over control ENCSR547LKC ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATAD2B-human ENCAB939ONI DNA False 2017-05-17 ENCODE 2 ENCFF160VXC, ENCFF834TUP, ENCFF877LYM 1995475028 ENCODE Processing Pipeline 552fd5badaa04e1f4d497acf989458d5 https://www.encodeproject.org/files/ENCFF434EKV/@@download/ENCFF434EKV.bigWig hg19 released borderline replicate concordance, mild to moderate bottlenecking missing control alignments ENCFF755NBK bigWig fold change over control ENCSR547LKC ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATAD2B-human ENCAB939ONI DNA False 2017-05-17 ENCODE 1, 2 ENCFF033PRP, ENCFF160VXC, ENCFF834TUP, ENCFF877LYM 2528440336 ENCODE Processing Pipeline b3ed54de4b6b57b6a88179f55fd26441 https://www.encodeproject.org/files/ENCFF755NBK/@@download/ENCFF755NBK.bigWig hg19 released borderline replicate concordance, mild to moderate bottlenecking missing control alignments ENCFF584PJC bigBed narrowPeak peaks ENCSR547LKC ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATAD2B-human ENCAB939ONI DNA False 2017-05-17 ENCODE 2 ENCFF418WIA 13257712 ENCODE Processing Pipeline 301b558c02f3eddbb557a5d2e450002d https://www.encodeproject.org/files/ENCFF584PJC/@@download/ENCFF584PJC.bigBed hg19 released borderline replicate concordance, mild to moderate bottlenecking missing control alignments ENCFF257CKD bigBed narrowPeak peaks ENCSR547LKC ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATAD2B-human ENCAB939ONI DNA False 2017-05-17 ENCODE 1 ENCFF198CPZ 11082780 ENCODE Processing Pipeline 4aec1c66ee0a61b177dffbe120b15e7f https://www.encodeproject.org/files/ENCFF257CKD/@@download/ENCFF257CKD.bigBed hg19 released borderline replicate concordance, mild to moderate bottlenecking missing control alignments ENCFF540MNX bed narrowPeak conservative idr thresholded peaks ENCSR547LKC ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATAD2B-human ENCAB939ONI DNA False 2017-05-17 ENCODE 1, 2 ENCFF001TDO, ENCFF198CPZ, ENCFF418WIA, ENCFF849HOO 174710 ENCODE Processing Pipeline b253048f9cdabc6874ca98131e3126d5 https://www.encodeproject.org/files/ENCFF540MNX/@@download/ENCFF540MNX.bed.gz hg19 released borderline replicate concordance, mild to moderate bottlenecking missing control alignments ENCFF198CPZ bed narrowPeak peaks ENCSR547LKC ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATAD2B-human ENCAB939ONI DNA False 2017-05-17 ENCODE 1 ENCFF033PRP, ENCFF160VXC 6717709 ENCODE Processing Pipeline f4b1a73f9cff8d1402fcf2f19e0fea73 https://www.encodeproject.org/files/ENCFF198CPZ/@@download/ENCFF198CPZ.bed.gz hg19 released borderline replicate concordance, mild to moderate bottlenecking missing control alignments ENCFF222KAL bigBed narrowPeak conservative idr thresholded peaks ENCSR547LKC ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATAD2B-human ENCAB939ONI DNA False 2017-05-17 ENCODE 1, 2 ENCFF540MNX 356730 ENCODE Processing Pipeline 74e48e1cec7d2a456fc822b8c1fd1ade https://www.encodeproject.org/files/ENCFF222KAL/@@download/ENCFF222KAL.bigBed hg19 released borderline replicate concordance, mild to moderate bottlenecking missing control alignments ENCFF849HOO bed narrowPeak peaks ENCSR547LKC ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATAD2B-human ENCAB939ONI DNA False 2017-05-17 ENCODE 1, 2 ENCFF033PRP, ENCFF160VXC, ENCFF834TUP, ENCFF877LYM 7253108 ENCODE Processing Pipeline 3a370546d1a46cbcefbf349fa1d6e9f0 https://www.encodeproject.org/files/ENCFF849HOO/@@download/ENCFF849HOO.bed.gz hg19 released borderline replicate concordance, mild to moderate bottlenecking missing control alignments ENCFF594WYM bigBed narrowPeak peaks ENCSR547LKC ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATAD2B-human ENCAB939ONI DNA False 2017-05-17 ENCODE 1, 2 ENCFF849HOO 13069673 ENCODE Processing Pipeline 1f1318b14fe7f8c59b02703be92c05a5 https://www.encodeproject.org/files/ENCFF594WYM/@@download/ENCFF594WYM.bigBed hg19 released borderline replicate concordance, mild to moderate bottlenecking missing control alignments ENCFF127WKZ bigBed narrowPeak optimal idr thresholded peaks ENCSR547LKC ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATAD2B-human ENCAB939ONI DNA False 2017-05-17 ENCODE 1, 2 ENCFF549KOD 554781 ENCODE Processing Pipeline 9b700f108878e47a6b9fbcd08648d62d https://www.encodeproject.org/files/ENCFF127WKZ/@@download/ENCFF127WKZ.bigBed hg19 released borderline replicate concordance, mild to moderate bottlenecking missing control alignments ENCFF435JEO fastq reads ENCSR910JAI ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOR1-human ENCAB025LCD DNA False 2016-11-30 ENCODE 2 1 100 paired-ended 2 ENCFF443EYG 3454650200 Michael Snyder, Stanford fd09d4d2f1a10a4ed3d8eb2bc1fff7f3 SRA:SRR5112257 https://www.encodeproject.org/files/ENCFF435JEO/@@download/ENCFF435JEO.fastq.gz Illumina HiSeq 4000 /files/ENCFF837MIV/ released mild to moderate bottlenecking, moderate library complexity ENCFF443EYG fastq reads ENCSR910JAI ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOR1-human ENCAB025LCD DNA False 2016-11-30 ENCODE 2 1 100 paired-ended 1 ENCFF435JEO 2960929664 Michael Snyder, Stanford c29ff6d3fa71580ffd70a5b236dab0d2 SRA:SRR5112257 https://www.encodeproject.org/files/ENCFF443EYG/@@download/ENCFF443EYG.fastq.gz Illumina HiSeq 4000 /files/ENCFF259GQA/ released mild to moderate bottlenecking, moderate library complexity ENCFF224PWB fastq reads ENCSR910JAI ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOR1-human ENCAB025LCD DNA False 2016-11-30 ENCODE 1 1 100 paired-ended 1 ENCFF337XLT 4192369883 Michael Snyder, Stanford 3f336d5c02c9e130280c99b0d523245a SRA:SRR5112256 https://www.encodeproject.org/files/ENCFF224PWB/@@download/ENCFF224PWB.fastq.gz Illumina HiSeq 4000 /files/ENCFF498JMO/ released mild to moderate bottlenecking, moderate library complexity ENCFF337XLT fastq reads ENCSR910JAI ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOR1-human ENCAB025LCD DNA False 2016-11-30 ENCODE 1 1 100 paired-ended 2 ENCFF224PWB 4446265502 Michael Snyder, Stanford 8a059b4d0c98e9551552660303531592 SRA:SRR5112256 https://www.encodeproject.org/files/ENCFF337XLT/@@download/ENCFF337XLT.fastq.gz Illumina HiSeq 4000 /files/ENCFF502GTS/ released mild to moderate bottlenecking, moderate library complexity ENCFF969PXB bam unfiltered alignments ENCSR910JAI ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOR1-human ENCAB025LCD DNA False 2016-11-30 ENCODE 2 100 ENCFF435JEO, ENCFF443EYG, ENCFF807MUK 5877460934 ENCODE Processing Pipeline 57c0d5a376cb98240e7f19d216aeebad https://www.encodeproject.org/files/ENCFF969PXB/@@download/ENCFF969PXB.bam hg19 released mild to moderate bottlenecking, moderate library complexity ENCFF420TEY bam unfiltered alignments ENCSR910JAI ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOR1-human ENCAB025LCD DNA False 2016-11-30 ENCODE 2 100 ENCFF435JEO, ENCFF443EYG, ENCFF643CGH 5882036204 ENCODE Processing Pipeline 218a89fdce252c7d29ed68e6bc93b1c4 https://www.encodeproject.org/files/ENCFF420TEY/@@download/ENCFF420TEY.bam GRCh38 released mild to moderate bottlenecking, moderate library complexity ENCFF484LPC bam unfiltered alignments ENCSR910JAI ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOR1-human ENCAB025LCD DNA False 2016-11-30 ENCODE 1 100 ENCFF224PWB, ENCFF337XLT, ENCFF643CGH 7839421889 ENCODE Processing Pipeline 465a17797ec79c2a13ddd60014978a48 https://www.encodeproject.org/files/ENCFF484LPC/@@download/ENCFF484LPC.bam GRCh38 released mild to moderate bottlenecking, moderate library complexity ENCFF814RYW bam unfiltered alignments ENCSR910JAI ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOR1-human ENCAB025LCD DNA False 2016-11-30 ENCODE 1 100 ENCFF224PWB, ENCFF337XLT, ENCFF807MUK 7834623290 ENCODE Processing Pipeline a638e7ee9868528851dd1c007842f818 https://www.encodeproject.org/files/ENCFF814RYW/@@download/ENCFF814RYW.bam hg19 released mild to moderate bottlenecking, moderate library complexity ENCFF282YII bam alignments ENCSR910JAI ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOR1-human ENCAB025LCD DNA False 2016-11-30 ENCODE 2 100 ENCFF435JEO, ENCFF443EYG, ENCFF807MUK 4201418841 ENCODE Processing Pipeline 883d7e84e2f28e672ab10721ab0982a7 https://www.encodeproject.org/files/ENCFF282YII/@@download/ENCFF282YII.bam hg19 released mild to moderate bottlenecking, moderate library complexity ENCFF420DGT bam alignments ENCSR910JAI ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOR1-human ENCAB025LCD DNA False 2016-11-30 ENCODE 2 100 ENCFF435JEO, ENCFF443EYG, ENCFF643CGH 4205404276 ENCODE Processing Pipeline b0207a286b8ff143359bd0446664dbba https://www.encodeproject.org/files/ENCFF420DGT/@@download/ENCFF420DGT.bam GRCh38 released mild to moderate bottlenecking, moderate library complexity ENCFF682WTZ bam alignments ENCSR910JAI ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOR1-human ENCAB025LCD DNA False 2016-11-30 ENCODE 1 100 ENCFF224PWB, ENCFF337XLT, ENCFF807MUK 5990476621 ENCODE Processing Pipeline cd7dd1edddeef1422429114acd57f5c5 https://www.encodeproject.org/files/ENCFF682WTZ/@@download/ENCFF682WTZ.bam hg19 released mild to moderate bottlenecking, moderate library complexity ENCFF129RYE bam alignments ENCSR910JAI ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOR1-human ENCAB025LCD DNA False 2016-11-30 ENCODE 1 100 ENCFF224PWB, ENCFF337XLT, ENCFF643CGH 5996078376 ENCODE Processing Pipeline 680900c76caebd025ca8223851016d7b https://www.encodeproject.org/files/ENCFF129RYE/@@download/ENCFF129RYE.bam GRCh38 released mild to moderate bottlenecking, moderate library complexity ENCFF862IGV bigWig signal p-value ENCSR910JAI ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOR1-human ENCAB025LCD DNA False 2016-11-30 ENCODE 2 ENCFF282YII, ENCFF834TUP 1296801281 ENCODE Processing Pipeline 68a83728ad74ccb7afd9c57534c030be https://www.encodeproject.org/files/ENCFF862IGV/@@download/ENCFF862IGV.bigWig hg19 released mild to moderate bottlenecking, moderate library complexity ENCFF833UPN bigWig fold change over control ENCSR910JAI ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOR1-human ENCAB025LCD DNA False 2016-11-30 ENCODE 1, 2 ENCFF129RYE, ENCFF420DGT, ENCFF712WXB, ENCFF790TAN 2620156675 ENCODE Processing Pipeline 800117539992c8b8bc8c2460fdb75ae6 https://www.encodeproject.org/files/ENCFF833UPN/@@download/ENCFF833UPN.bigWig GRCh38 released mild to moderate bottlenecking, moderate library complexity ENCFF292YLV bigWig fold change over control ENCSR910JAI ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOR1-human ENCAB025LCD DNA False 2016-11-30 ENCODE 1, 2 ENCFF160VXC, ENCFF282YII, ENCFF682WTZ, ENCFF834TUP 2617519106 ENCODE Processing Pipeline cae91f22ac1f38f2ae4f508af9d4efc8 https://www.encodeproject.org/files/ENCFF292YLV/@@download/ENCFF292YLV.bigWig hg19 released mild to moderate bottlenecking, moderate library complexity ENCFF098MNE bed narrowPeak peaks ENCSR910JAI ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOR1-human ENCAB025LCD DNA False 2016-11-30 ENCODE 1 ENCFF129RYE, ENCFF712WXB, ENCFF790TAN 7190812 ENCODE Processing Pipeline d7935bb743438cfa2f82636a34b7b201 https://www.encodeproject.org/files/ENCFF098MNE/@@download/ENCFF098MNE.bed.gz GRCh38 released mild to moderate bottlenecking, moderate library complexity ENCFF756UDD bed narrowPeak peaks ENCSR910JAI ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOR1-human ENCAB025LCD DNA False 2016-11-30 ENCODE 2 ENCFF420DGT, ENCFF712WXB 6854310 ENCODE Processing Pipeline d1c6eeddfc90e75e760a0d31d26753f6 https://www.encodeproject.org/files/ENCFF756UDD/@@download/ENCFF756UDD.bed.gz GRCh38 released mild to moderate bottlenecking, moderate library complexity ENCFF825GRZ bed narrowPeak peaks ENCSR910JAI ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOR1-human ENCAB025LCD DNA False 2016-11-30 ENCODE 1, 2 ENCFF129RYE, ENCFF420DGT, ENCFF712WXB, ENCFF790TAN 7271805 ENCODE Processing Pipeline 52bd0192a1c344c4a3afe1e4f450be33 https://www.encodeproject.org/files/ENCFF825GRZ/@@download/ENCFF825GRZ.bed.gz GRCh38 released mild to moderate bottlenecking, moderate library complexity ENCFF584ZGO bed narrowPeak peaks ENCSR910JAI ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOR1-human ENCAB025LCD DNA False 2016-11-30 ENCODE 1, 2 ENCFF160VXC, ENCFF282YII, ENCFF682WTZ, ENCFF834TUP 7248295 ENCODE Processing Pipeline a1ed7479c644b147a2bb7e692edf573f https://www.encodeproject.org/files/ENCFF584ZGO/@@download/ENCFF584ZGO.bed.gz hg19 released mild to moderate bottlenecking, moderate library complexity ENCFF724VJM bigBed narrowPeak peaks ENCSR910JAI ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOR1-human ENCAB025LCD DNA False 2016-11-30 ENCODE 1, 2 ENCFF825GRZ 13355817 ENCODE Processing Pipeline 41708bfc00993c3cc0e04772d7c90d94 https://www.encodeproject.org/files/ENCFF724VJM/@@download/ENCFF724VJM.bigBed GRCh38 released mild to moderate bottlenecking, moderate library complexity ENCFF444WWM bigBed narrowPeak peaks ENCSR910JAI ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOR1-human ENCAB025LCD DNA False 2016-11-30 ENCODE 1, 2 ENCFF584ZGO 13317241 ENCODE Processing Pipeline 37f39a5f8ac78f8d1284088ad3670db5 https://www.encodeproject.org/files/ENCFF444WWM/@@download/ENCFF444WWM.bigBed hg19 released mild to moderate bottlenecking, moderate library complexity ENCFF938VXE bigBed narrowPeak conservative idr thresholded peaks ENCSR910JAI ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOR1-human ENCAB025LCD DNA False 2016-11-30 ENCODE 1, 2 ENCFF691VAI 950162 ENCODE Processing Pipeline 2703bce0925c2935902d05f707626a8f https://www.encodeproject.org/files/ENCFF938VXE/@@download/ENCFF938VXE.bigBed hg19 released mild to moderate bottlenecking, moderate library complexity ENCFF956WTY bigWig signal p-value ENCSR910JAI ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOR1-human ENCAB025LCD DNA False 2016-11-30 ENCODE 1 ENCFF129RYE, ENCFF712WXB, ENCFF790TAN 1665576913 ENCODE Processing Pipeline 01157ea113b9c1d089b896d84fd5089e https://www.encodeproject.org/files/ENCFF956WTY/@@download/ENCFF956WTY.bigWig GRCh38 released mild to moderate bottlenecking, moderate library complexity ENCFF110GZR bigWig signal p-value ENCSR910JAI ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOR1-human ENCAB025LCD DNA False 2016-11-30 ENCODE 1 ENCFF160VXC, ENCFF682WTZ, ENCFF834TUP 1952695239 ENCODE Processing Pipeline 45ed4cc4eb3593279e95a3abd1085377 https://www.encodeproject.org/files/ENCFF110GZR/@@download/ENCFF110GZR.bigWig hg19 released mild to moderate bottlenecking, moderate library complexity ENCFF753RMA bigWig signal p-value ENCSR910JAI ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOR1-human ENCAB025LCD DNA False 2016-11-30 ENCODE 2 ENCFF420DGT, ENCFF712WXB 1317308627 ENCODE Processing Pipeline f113636cd6ff3228118a3b0947f3e20d https://www.encodeproject.org/files/ENCFF753RMA/@@download/ENCFF753RMA.bigWig GRCh38 released mild to moderate bottlenecking, moderate library complexity ENCFF177ILO bigWig signal p-value ENCSR910JAI ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOR1-human ENCAB025LCD DNA False 2016-11-30 ENCODE 1, 2 ENCFF129RYE, ENCFF420DGT, ENCFF712WXB, ENCFF790TAN 2440490640 ENCODE Processing Pipeline d290920cb45d6ac517b3b4f7afad86da https://www.encodeproject.org/files/ENCFF177ILO/@@download/ENCFF177ILO.bigWig GRCh38 released mild to moderate bottlenecking, moderate library complexity ENCFF775LPV bigWig signal p-value ENCSR910JAI ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOR1-human ENCAB025LCD DNA False 2016-11-30 ENCODE 1, 2 ENCFF160VXC, ENCFF282YII, ENCFF682WTZ, ENCFF834TUP 2437281953 ENCODE Processing Pipeline 4f36652fef197516ee14d14e1c199167 https://www.encodeproject.org/files/ENCFF775LPV/@@download/ENCFF775LPV.bigWig hg19 released mild to moderate bottlenecking, moderate library complexity ENCFF261GZW bigWig fold change over control ENCSR910JAI ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOR1-human ENCAB025LCD DNA False 2016-11-30 ENCODE 2 ENCFF282YII, ENCFF834TUP 1447799053 ENCODE Processing Pipeline b665188e551a075bd82667a51caa458c https://www.encodeproject.org/files/ENCFF261GZW/@@download/ENCFF261GZW.bigWig hg19 released mild to moderate bottlenecking, moderate library complexity ENCFF705RWC bigBed narrowPeak peaks ENCSR910JAI ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOR1-human ENCAB025LCD DNA False 2016-11-30 ENCODE 1 ENCFF098MNE 13363623 ENCODE Processing Pipeline 3d7febda1acea22229927a5ace619a4b https://www.encodeproject.org/files/ENCFF705RWC/@@download/ENCFF705RWC.bigBed GRCh38 released mild to moderate bottlenecking, moderate library complexity ENCFF620EUP bed narrowPeak peaks ENCSR910JAI ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOR1-human ENCAB025LCD DNA False 2016-11-30 ENCODE 1 ENCFF160VXC, ENCFF682WTZ, ENCFF834TUP 7172221 ENCODE Processing Pipeline 1dfaa7944b26740a476409b2fbc05319 https://www.encodeproject.org/files/ENCFF620EUP/@@download/ENCFF620EUP.bed.gz hg19 released mild to moderate bottlenecking, moderate library complexity ENCFF675VGK bed narrowPeak peaks ENCSR910JAI ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOR1-human ENCAB025LCD DNA False 2016-11-30 ENCODE 2 ENCFF282YII, ENCFF834TUP 6846730 ENCODE Processing Pipeline 8d55e7ff85dcc1b6539585c43df576c4 https://www.encodeproject.org/files/ENCFF675VGK/@@download/ENCFF675VGK.bed.gz hg19 released mild to moderate bottlenecking, moderate library complexity ENCFF766MKD bigBed narrowPeak peaks ENCSR910JAI ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOR1-human ENCAB025LCD DNA False 2016-11-30 ENCODE 1 ENCFF620EUP 13336290 ENCODE Processing Pipeline 0b6fbc807a9d41a6b2c99288e8be20f0 https://www.encodeproject.org/files/ENCFF766MKD/@@download/ENCFF766MKD.bigBed hg19 released mild to moderate bottlenecking, moderate library complexity ENCFF353PHY bigWig fold change over control ENCSR910JAI ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOR1-human ENCAB025LCD DNA False 2016-11-30 ENCODE 1 ENCFF160VXC, ENCFF682WTZ, ENCFF834TUP 2134604671 ENCODE Processing Pipeline 094828a306abe6cfaace16fc80efdb43 https://www.encodeproject.org/files/ENCFF353PHY/@@download/ENCFF353PHY.bigWig hg19 released mild to moderate bottlenecking, moderate library complexity ENCFF124FDK bigWig fold change over control ENCSR910JAI ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOR1-human ENCAB025LCD DNA False 2016-11-30 ENCODE 2 ENCFF420DGT, ENCFF712WXB 1435582424 ENCODE Processing Pipeline 39a9a53ce41353b69d2b29a7c34b5687 https://www.encodeproject.org/files/ENCFF124FDK/@@download/ENCFF124FDK.bigWig GRCh38 released mild to moderate bottlenecking, moderate library complexity ENCFF097WRP bigBed narrowPeak conservative idr thresholded peaks ENCSR910JAI ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOR1-human ENCAB025LCD DNA False 2016-11-30 ENCODE 1, 2 ENCFF577EBU 962909 ENCODE Processing Pipeline 5599d888f70279efc6032b7b9279df11 https://www.encodeproject.org/files/ENCFF097WRP/@@download/ENCFF097WRP.bigBed GRCh38 released mild to moderate bottlenecking, moderate library complexity ENCFF812UVT bigBed narrowPeak peaks ENCSR910JAI ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOR1-human ENCAB025LCD DNA False 2016-11-30 ENCODE 2 ENCFF675VGK 13401661 ENCODE Processing Pipeline efe9e81de2176c349e1b8b104a7d0b1d https://www.encodeproject.org/files/ENCFF812UVT/@@download/ENCFF812UVT.bigBed hg19 released mild to moderate bottlenecking, moderate library complexity ENCFF691VAI bed narrowPeak conservative idr thresholded peaks ENCSR910JAI ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOR1-human ENCAB025LCD DNA False 2016-11-30 ENCODE 1, 2 ENCFF001TDO, ENCFF584ZGO, ENCFF620EUP, ENCFF675VGK 443702 ENCODE Processing Pipeline fa839911c6cf87bab1251c987b0f18bc https://www.encodeproject.org/files/ENCFF691VAI/@@download/ENCFF691VAI.bed.gz hg19 released mild to moderate bottlenecking, moderate library complexity ENCFF679NLX bigBed narrowPeak optimal idr thresholded peaks ENCSR910JAI ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOR1-human ENCAB025LCD DNA False 2016-11-30 ENCODE 1, 2 ENCFF165BCW 1000551 ENCODE Processing Pipeline a3c53a8de7adb5c582a5c05ef0ec485e https://www.encodeproject.org/files/ENCFF679NLX/@@download/ENCFF679NLX.bigBed hg19 released mild to moderate bottlenecking, moderate library complexity ENCFF785EFH bigWig fold change over control ENCSR910JAI ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOR1-human ENCAB025LCD DNA False 2016-11-30 ENCODE 1 ENCFF129RYE, ENCFF712WXB, ENCFF790TAN 2135747882 ENCODE Processing Pipeline b7d91d563b34e6d61d056dcd96294843 https://www.encodeproject.org/files/ENCFF785EFH/@@download/ENCFF785EFH.bigWig GRCh38 released mild to moderate bottlenecking, moderate library complexity ENCFF554XVP bigBed narrowPeak peaks ENCSR910JAI ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOR1-human ENCAB025LCD DNA False 2016-11-30 ENCODE 2 ENCFF756UDD 13418694 ENCODE Processing Pipeline a7709bdad22cb4012d648e8b16c4717b https://www.encodeproject.org/files/ENCFF554XVP/@@download/ENCFF554XVP.bigBed GRCh38 released mild to moderate bottlenecking, moderate library complexity ENCFF577EBU bed narrowPeak conservative idr thresholded peaks ENCSR910JAI ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOR1-human ENCAB025LCD DNA False 2016-11-30 ENCODE 1, 2 ENCFF098MNE, ENCFF419RSJ, ENCFF756UDD, ENCFF825GRZ 450611 ENCODE Processing Pipeline cfbbfda01870acd751cd4025a009b254 https://www.encodeproject.org/files/ENCFF577EBU/@@download/ENCFF577EBU.bed.gz GRCh38 released mild to moderate bottlenecking, moderate library complexity ENCFF165BCW bed narrowPeak optimal idr thresholded peaks ENCSR910JAI ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOR1-human ENCAB025LCD DNA False 2016-11-30 ENCODE 1, 2 ENCFF001TDO, ENCFF584ZGO, ENCFF620EUP, ENCFF675VGK 472483 ENCODE Processing Pipeline 400dadc1bad41dafe27291e51353005f https://www.encodeproject.org/files/ENCFF165BCW/@@download/ENCFF165BCW.bed.gz hg19 released mild to moderate bottlenecking, moderate library complexity ENCFF856HUK bed narrowPeak optimal idr thresholded peaks ENCSR910JAI ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOR1-human ENCAB025LCD DNA False 2016-11-30 ENCODE 1, 2 ENCFF098MNE, ENCFF419RSJ, ENCFF756UDD, ENCFF825GRZ 479826 ENCODE Processing Pipeline 3fce17d32adedb8d11def5e87ff3d0fe https://www.encodeproject.org/files/ENCFF856HUK/@@download/ENCFF856HUK.bed.gz GRCh38 released mild to moderate bottlenecking, moderate library complexity ENCFF493SVP bigBed narrowPeak optimal idr thresholded peaks ENCSR910JAI ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOR1-human ENCAB025LCD DNA False 2016-11-30 ENCODE 1, 2 ENCFF856HUK 1013466 ENCODE Processing Pipeline 6bec9369b1293e8710c31f4a682a19d1 https://www.encodeproject.org/files/ENCFF493SVP/@@download/ENCFF493SVP.bigBed GRCh38 released mild to moderate bottlenecking, moderate library complexity ENCFF206ARZ fastq reads ENCSR837EYC ChIP-seq EFO:0002067 K562 cell line Homo sapiens NRF1-human ENCAB000BLM DNA False 2016-06-16 ENCODE 1 1 50 single-ended 1189586211 Richard Myers, HAIB 467f2ebabe696c458198205cdc226053 SRA:SRR5339393 https://www.encodeproject.org/files/ENCFF206ARZ/@@download/ENCFF206ARZ.fastq.gz Illumina HiSeq 2000 /files/ENCFF001RVO/ released low read depth, moderate library complexity ENCFF252RBF fastq reads ENCSR837EYC ChIP-seq EFO:0002067 K562 cell line Homo sapiens NRF1-human ENCAB000BLM DNA False 2016-06-16 ENCODE 2 1 50 single-ended 1125296409 Richard Myers, HAIB 4f0e8b31307e3a995099a7a7392facbd SRA:SRR5339392 https://www.encodeproject.org/files/ENCFF252RBF/@@download/ENCFF252RBF.fastq.gz Illumina HiSeq 2000 /files/ENCFF002BGC/ released low read depth, moderate library complexity ENCFF862RTJ bam alignments ENCSR837EYC ChIP-seq EFO:0002067 K562 cell line Homo sapiens NRF1-human ENCAB000BLM DNA False 2016-06-16 ENCODE 1 50 ENCFF206ARZ, ENCFF807MUK 718270539 ENCODE Processing Pipeline 144b95e9b136afd3475ffe9564ee7434 https://www.encodeproject.org/files/ENCFF862RTJ/@@download/ENCFF862RTJ.bam hg19 released low read depth, moderate library complexity ENCFF742QOQ bam alignments ENCSR837EYC ChIP-seq EFO:0002067 K562 cell line Homo sapiens NRF1-human ENCAB000BLM DNA False 2016-06-16 ENCODE 2 50 ENCFF252RBF, ENCFF807MUK 754715535 ENCODE Processing Pipeline 6360ff2ee76218c03cdb37b9efd5caf7 https://www.encodeproject.org/files/ENCFF742QOQ/@@download/ENCFF742QOQ.bam hg19 released low read depth, moderate library complexity ENCFF978AGA bigWig signal p-value ENCSR837EYC ChIP-seq EFO:0002067 K562 cell line Homo sapiens NRF1-human ENCAB000BLM DNA False 2016-06-16 ENCODE 1 ENCFF023YMB, ENCFF061QOJ, ENCFF862RTJ 905009147 ENCODE Processing Pipeline 6ac48a4d557d09f9dd8cdc7b21cb7844 https://www.encodeproject.org/files/ENCFF978AGA/@@download/ENCFF978AGA.bigWig hg19 released low read depth, moderate library complexity ENCFF300JRB bigWig signal p-value ENCSR837EYC ChIP-seq EFO:0002067 K562 cell line Homo sapiens NRF1-human ENCAB000BLM DNA False 2016-06-16 ENCODE 2 ENCFF023YMB, ENCFF061QOJ, ENCFF742QOQ 924957599 ENCODE Processing Pipeline e38deb9b6f49fcce4e865a2863c72029 https://www.encodeproject.org/files/ENCFF300JRB/@@download/ENCFF300JRB.bigWig hg19 released low read depth, moderate library complexity ENCFF812ZYM bigWig signal p-value ENCSR837EYC ChIP-seq EFO:0002067 K562 cell line Homo sapiens NRF1-human ENCAB000BLM DNA False 2016-06-16 ENCODE 1, 2 ENCFF023YMB, ENCFF061QOJ, ENCFF742QOQ, ENCFF862RTJ 1005407653 ENCODE Processing Pipeline 1d372b2507a94c4da5a0189aeb470878 https://www.encodeproject.org/files/ENCFF812ZYM/@@download/ENCFF812ZYM.bigWig hg19 released low read depth, moderate library complexity ENCFF576VLX bigWig fold change over control ENCSR837EYC ChIP-seq EFO:0002067 K562 cell line Homo sapiens NRF1-human ENCAB000BLM DNA False 2016-06-16 ENCODE 2 ENCFF023YMB, ENCFF061QOJ, ENCFF742QOQ 653935114 ENCODE Processing Pipeline 4bb12e2bf0d251452f9f1c4c64fb968b https://www.encodeproject.org/files/ENCFF576VLX/@@download/ENCFF576VLX.bigWig hg19 released low read depth, moderate library complexity ENCFF352ACZ bigWig fold change over control ENCSR837EYC ChIP-seq EFO:0002067 K562 cell line Homo sapiens NRF1-human ENCAB000BLM DNA False 2016-06-16 ENCODE 1 ENCFF023YMB, ENCFF061QOJ, ENCFF862RTJ 591203467 ENCODE Processing Pipeline 7153a020df82e06caa25cd0c5c3a574f https://www.encodeproject.org/files/ENCFF352ACZ/@@download/ENCFF352ACZ.bigWig hg19 released low read depth, moderate library complexity ENCFF027MWG bigWig fold change over control ENCSR837EYC ChIP-seq EFO:0002067 K562 cell line Homo sapiens NRF1-human ENCAB000BLM DNA False 2016-06-16 ENCODE 1, 2 ENCFF023YMB, ENCFF061QOJ, ENCFF742QOQ, ENCFF862RTJ 981625613 ENCODE Processing Pipeline e2c2fef280ae52141429c4d62fe608e5 https://www.encodeproject.org/files/ENCFF027MWG/@@download/ENCFF027MWG.bigWig hg19 released low read depth, moderate library complexity ENCFF870HGG bam unfiltered alignments ENCSR837EYC ChIP-seq EFO:0002067 K562 cell line Homo sapiens NRF1-human ENCAB000BLM DNA False 2016-06-16 ENCODE 1 50 ENCFF206ARZ, ENCFF643CGH 1144151099 ENCODE Processing Pipeline 9edfb388cf89b0a64e431b040de20465 https://www.encodeproject.org/files/ENCFF870HGG/@@download/ENCFF870HGG.bam GRCh38 released low read depth, moderate library complexity ENCFF185CRQ bam unfiltered alignments ENCSR837EYC ChIP-seq EFO:0002067 K562 cell line Homo sapiens NRF1-human ENCAB000BLM DNA False 2016-06-16 ENCODE 2 50 ENCFF252RBF, ENCFF643CGH 1113350402 ENCODE Processing Pipeline 2ca59d9d834c1342976759ccf09a642b https://www.encodeproject.org/files/ENCFF185CRQ/@@download/ENCFF185CRQ.bam GRCh38 released low read depth, moderate library complexity ENCFF564KCD bam alignments ENCSR837EYC ChIP-seq EFO:0002067 K562 cell line Homo sapiens NRF1-human ENCAB000BLM DNA False 2016-06-16 ENCODE 2 50 ENCFF252RBF, ENCFF643CGH 754403095 ENCODE Processing Pipeline 5d0c9bea684814459d75f3b33609208e https://www.encodeproject.org/files/ENCFF564KCD/@@download/ENCFF564KCD.bam GRCh38 released low read depth, moderate library complexity ENCFF207NLX bam alignments ENCSR837EYC ChIP-seq EFO:0002067 K562 cell line Homo sapiens NRF1-human ENCAB000BLM DNA False 2016-06-16 ENCODE 1 50 ENCFF206ARZ, ENCFF643CGH 717958307 ENCODE Processing Pipeline 6a1b6a04f9a88695bf844b4e96438ddb https://www.encodeproject.org/files/ENCFF207NLX/@@download/ENCFF207NLX.bam GRCh38 released low read depth, moderate library complexity ENCFF058DPW bigWig signal p-value ENCSR837EYC ChIP-seq EFO:0002067 K562 cell line Homo sapiens NRF1-human ENCAB000BLM DNA False 2016-06-16 ENCODE 1 ENCFF207NLX, ENCFF332SVJ, ENCFF709XAA 906441624 ENCODE Processing Pipeline 930911f2e51fe7e5ec0b70b4bfe0c1b8 https://www.encodeproject.org/files/ENCFF058DPW/@@download/ENCFF058DPW.bigWig GRCh38 released low read depth, moderate library complexity ENCFF308RKT bigWig signal p-value ENCSR837EYC ChIP-seq EFO:0002067 K562 cell line Homo sapiens NRF1-human ENCAB000BLM DNA False 2016-06-16 ENCODE 2 ENCFF332SVJ, ENCFF564KCD, ENCFF709XAA 1011894179 ENCODE Processing Pipeline 324588031893185def2c4b4b4d0dd27b https://www.encodeproject.org/files/ENCFF308RKT/@@download/ENCFF308RKT.bigWig GRCh38 released low read depth, moderate library complexity ENCFF197LZX bigWig signal p-value ENCSR837EYC ChIP-seq EFO:0002067 K562 cell line Homo sapiens NRF1-human ENCAB000BLM DNA False 2016-06-16 ENCODE 1, 2 ENCFF207NLX, ENCFF332SVJ, ENCFF564KCD, ENCFF709XAA 1175973226 ENCODE Processing Pipeline a23a82e59bb8e945165e64babec59e58 https://www.encodeproject.org/files/ENCFF197LZX/@@download/ENCFF197LZX.bigWig GRCh38 released low read depth, moderate library complexity ENCFF728GJW bigWig fold change over control ENCSR837EYC ChIP-seq EFO:0002067 K562 cell line Homo sapiens NRF1-human ENCAB000BLM DNA False 2016-06-16 ENCODE 1 ENCFF207NLX, ENCFF332SVJ, ENCFF709XAA 589918499 ENCODE Processing Pipeline f8d456cb87e393ffb23664abe5aa74e0 https://www.encodeproject.org/files/ENCFF728GJW/@@download/ENCFF728GJW.bigWig GRCh38 released low read depth, moderate library complexity ENCFF267SKK bigWig fold change over control ENCSR837EYC ChIP-seq EFO:0002067 K562 cell line Homo sapiens NRF1-human ENCAB000BLM DNA False 2016-06-16 ENCODE 2 ENCFF332SVJ, ENCFF564KCD, ENCFF709XAA 651760488 ENCODE Processing Pipeline 45b57e81cace45d4e3540bbd258760ef https://www.encodeproject.org/files/ENCFF267SKK/@@download/ENCFF267SKK.bigWig GRCh38 released low read depth, moderate library complexity ENCFF932HVW bigWig fold change over control ENCSR837EYC ChIP-seq EFO:0002067 K562 cell line Homo sapiens NRF1-human ENCAB000BLM DNA False 2016-06-16 ENCODE 1, 2 ENCFF207NLX, ENCFF332SVJ, ENCFF564KCD, ENCFF709XAA 978529953 ENCODE Processing Pipeline 727c9912fedb2bf0fcefc182abd79ef7 https://www.encodeproject.org/files/ENCFF932HVW/@@download/ENCFF932HVW.bigWig GRCh38 released low read depth, moderate library complexity ENCFF617KCZ bed narrowPeak peaks ENCSR837EYC ChIP-seq EFO:0002067 K562 cell line Homo sapiens NRF1-human ENCAB000BLM DNA False 2016-06-16 ENCODE 1 ENCFF207NLX, ENCFF332SVJ, ENCFF709XAA 5841840 ENCODE Processing Pipeline 1b3caa2049a8b1d6339b5104dd2e9826 https://www.encodeproject.org/files/ENCFF617KCZ/@@download/ENCFF617KCZ.bed.gz GRCh38 released low read depth, moderate library complexity ENCFF161WZP bed narrowPeak peaks ENCSR837EYC ChIP-seq EFO:0002067 K562 cell line Homo sapiens NRF1-human ENCAB000BLM DNA False 2016-06-16 ENCODE 2 ENCFF332SVJ, ENCFF564KCD, ENCFF709XAA 5869046 ENCODE Processing Pipeline d86dd6901457021f3560e99080d887d1 https://www.encodeproject.org/files/ENCFF161WZP/@@download/ENCFF161WZP.bed.gz GRCh38 released low read depth, moderate library complexity ENCFF534QFC bigBed narrowPeak peaks ENCSR837EYC ChIP-seq EFO:0002067 K562 cell line Homo sapiens NRF1-human ENCAB000BLM DNA False 2016-06-16 ENCODE 2 ENCFF161WZP 13486480 ENCODE Processing Pipeline 7e642d04a792e6fe82e98ccb464ffc0e https://www.encodeproject.org/files/ENCFF534QFC/@@download/ENCFF534QFC.bigBed GRCh38 released low read depth, moderate library complexity ENCFF636TZL bed narrowPeak peaks ENCSR837EYC ChIP-seq EFO:0002067 K562 cell line Homo sapiens NRF1-human ENCAB000BLM DNA False 2016-06-16 ENCODE 1, 2 ENCFF207NLX, ENCFF332SVJ, ENCFF564KCD, ENCFF709XAA 6373780 ENCODE Processing Pipeline 1509ce7c1c429fd1c7d7ff51e19b94d4 https://www.encodeproject.org/files/ENCFF636TZL/@@download/ENCFF636TZL.bed.gz GRCh38 released low read depth, moderate library complexity ENCFF812GVV bigBed narrowPeak optimal idr thresholded peaks ENCSR837EYC ChIP-seq EFO:0002067 K562 cell line Homo sapiens NRF1-human ENCAB000BLM DNA False 2016-06-16 ENCODE 1, 2 ENCFF626VDA 691149 ENCODE Processing Pipeline 7dfd8eaeb418179ca9974c49bebe64d6 https://www.encodeproject.org/files/ENCFF812GVV/@@download/ENCFF812GVV.bigBed GRCh38 released low read depth, moderate library complexity ENCFF116DXL bigBed narrowPeak peaks ENCSR837EYC ChIP-seq EFO:0002067 K562 cell line Homo sapiens NRF1-human ENCAB000BLM DNA False 2016-06-16 ENCODE 1 ENCFF617KCZ 13392542 ENCODE Processing Pipeline 57f4568567a6ddce486fbbac44a2941e https://www.encodeproject.org/files/ENCFF116DXL/@@download/ENCFF116DXL.bigBed GRCh38 released low read depth, moderate library complexity ENCFF651QMX bigBed narrowPeak peaks ENCSR837EYC ChIP-seq EFO:0002067 K562 cell line Homo sapiens NRF1-human ENCAB000BLM DNA False 2016-06-16 ENCODE 1, 2 ENCFF636TZL 13579785 ENCODE Processing Pipeline 199f3dd641ee09595e9919aec1844030 https://www.encodeproject.org/files/ENCFF651QMX/@@download/ENCFF651QMX.bigBed GRCh38 released low read depth, moderate library complexity ENCFF626VDA bed narrowPeak optimal idr thresholded peaks ENCSR837EYC ChIP-seq EFO:0002067 K562 cell line Homo sapiens NRF1-human ENCAB000BLM DNA False 2016-06-16 ENCODE 1, 2 ENCFF161WZP, ENCFF419RSJ, ENCFF617KCZ, ENCFF636TZL 376439 ENCODE Processing Pipeline 073ab3f58f304ec82215a5ecfcb383b8 https://www.encodeproject.org/files/ENCFF626VDA/@@download/ENCFF626VDA.bed.gz GRCh38 released low read depth, moderate library complexity ENCFF064VGJ bam unfiltered alignments ENCSR837EYC ChIP-seq EFO:0002067 K562 cell line Homo sapiens NRF1-human ENCAB000BLM DNA False 2016-06-16 ENCODE 1 50 ENCFF206ARZ, ENCFF807MUK 1142476952 ENCODE Processing Pipeline 878487d46c0c3e6ef33b63ec67697450 https://www.encodeproject.org/files/ENCFF064VGJ/@@download/ENCFF064VGJ.bam hg19 released low read depth, moderate library complexity ENCFF746AYT bam unfiltered alignments ENCSR837EYC ChIP-seq EFO:0002067 K562 cell line Homo sapiens NRF1-human ENCAB000BLM DNA False 2016-06-16 ENCODE 2 50 ENCFF252RBF, ENCFF807MUK 1111610277 ENCODE Processing Pipeline 3976abffe3ad51329652fff8e6569080 https://www.encodeproject.org/files/ENCFF746AYT/@@download/ENCFF746AYT.bam hg19 released low read depth, moderate library complexity ENCFF606MZK bed narrowPeak peaks ENCSR837EYC ChIP-seq EFO:0002067 K562 cell line Homo sapiens NRF1-human ENCAB000BLM DNA False 2016-06-16 ENCODE 1 ENCFF023YMB, ENCFF061QOJ, ENCFF862RTJ 5843860 ENCODE Processing Pipeline 951c843562da6d636f7e4f4647195342 https://www.encodeproject.org/files/ENCFF606MZK/@@download/ENCFF606MZK.bed.gz hg19 released low read depth, moderate library complexity ENCFF807NSC bigBed narrowPeak peaks ENCSR837EYC ChIP-seq EFO:0002067 K562 cell line Homo sapiens NRF1-human ENCAB000BLM DNA False 2016-06-16 ENCODE 1 ENCFF606MZK 13385130 ENCODE Processing Pipeline c4f97e229bf50809aba8cb867179d249 https://www.encodeproject.org/files/ENCFF807NSC/@@download/ENCFF807NSC.bigBed hg19 released low read depth, moderate library complexity ENCFF144PPR bed narrowPeak optimal idr thresholded peaks ENCSR837EYC ChIP-seq EFO:0002067 K562 cell line Homo sapiens NRF1-human ENCAB000BLM DNA False 2016-06-16 ENCODE 1, 2 ENCFF001TDO, ENCFF559ITE, ENCFF606MZK, ENCFF892HJT 370811 ENCODE Processing Pipeline ed341ef382b1729a4467c26b9d7afc00 https://www.encodeproject.org/files/ENCFF144PPR/@@download/ENCFF144PPR.bed.gz hg19 released low read depth, moderate library complexity ENCFF205RKZ bigBed narrowPeak optimal idr thresholded peaks ENCSR837EYC ChIP-seq EFO:0002067 K562 cell line Homo sapiens NRF1-human ENCAB000BLM DNA False 2016-06-16 ENCODE 1, 2 ENCFF144PPR 680314 ENCODE Processing Pipeline 3b9ad4731a6d7702cc07ff49e619fe1f https://www.encodeproject.org/files/ENCFF205RKZ/@@download/ENCFF205RKZ.bigBed hg19 released low read depth, moderate library complexity ENCFF892HJT bed narrowPeak peaks ENCSR837EYC ChIP-seq EFO:0002067 K562 cell line Homo sapiens NRF1-human ENCAB000BLM DNA False 2016-06-16 ENCODE 2 ENCFF023YMB, ENCFF061QOJ, ENCFF742QOQ 5874459 ENCODE Processing Pipeline f7b54c7101852b2eae0e6453528c8cd5 https://www.encodeproject.org/files/ENCFF892HJT/@@download/ENCFF892HJT.bed.gz hg19 released low read depth, moderate library complexity ENCFF111EWY bigBed narrowPeak peaks ENCSR837EYC ChIP-seq EFO:0002067 K562 cell line Homo sapiens NRF1-human ENCAB000BLM DNA False 2016-06-16 ENCODE 1, 2 ENCFF559ITE 13550444 ENCODE Processing Pipeline 61e6d94202a567d6819c1cf3bffaccb7 https://www.encodeproject.org/files/ENCFF111EWY/@@download/ENCFF111EWY.bigBed hg19 released low read depth, moderate library complexity ENCFF559ITE bed narrowPeak peaks ENCSR837EYC ChIP-seq EFO:0002067 K562 cell line Homo sapiens NRF1-human ENCAB000BLM DNA False 2016-06-16 ENCODE 1, 2 ENCFF023YMB, ENCFF061QOJ, ENCFF742QOQ, ENCFF862RTJ 6386406 ENCODE Processing Pipeline 1bc4bd7836fca6a87e852936ce357253 https://www.encodeproject.org/files/ENCFF559ITE/@@download/ENCFF559ITE.bed.gz hg19 released low read depth, moderate library complexity ENCFF604ADM bigBed narrowPeak peaks ENCSR837EYC ChIP-seq EFO:0002067 K562 cell line Homo sapiens NRF1-human ENCAB000BLM DNA False 2016-06-16 ENCODE 2 ENCFF892HJT 13476175 ENCODE Processing Pipeline e998e9aed28b80d961112669ca158bee https://www.encodeproject.org/files/ENCFF604ADM/@@download/ENCFF604ADM.bigBed hg19 released low read depth, moderate library complexity ENCFF946CNO bam unfiltered alignments ENCSR524BUE ChIP-seq EFO:0002067 K562 cell line Homo sapiens RAD51-human ENCAB406ZKT DNA False 2016-06-14 ENCODE 2 100 ENCFF354UBV, ENCFF600KXI, ENCFF807MUK 4484974784 ENCODE Processing Pipeline 0c4e6aadda8c185bea8b116c9ee3f839 https://www.encodeproject.org/files/ENCFF946CNO/@@download/ENCFF946CNO.bam hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking ENCFF829HRO bam unfiltered alignments ENCSR524BUE ChIP-seq EFO:0002067 K562 cell line Homo sapiens RAD51-human ENCAB406ZKT DNA False 2016-06-14 ENCODE 1 100 ENCFF273REO, ENCFF807MUK, ENCFF809ISJ 4348701884 ENCODE Processing Pipeline 5c3a130b973c4c1d5cbce61dcd12f0ec https://www.encodeproject.org/files/ENCFF829HRO/@@download/ENCFF829HRO.bam hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking ENCFF600KXI fastq reads ENCSR524BUE ChIP-seq EFO:0002067 K562 cell line Homo sapiens RAD51-human ENCAB406ZKT DNA False 2016-06-14 ENCODE 2 1 100 paired-ended 2 ENCFF354UBV 2153107128 Michael Snyder, Stanford f9074bbb228cc05a6d394ae31b930469 SRA:SRR5111735 https://www.encodeproject.org/files/ENCFF600KXI/@@download/ENCFF600KXI.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFA/ released borderline replicate concordance, low read depth, mild to moderate bottlenecking ENCFF809ISJ fastq reads ENCSR524BUE ChIP-seq EFO:0002067 K562 cell line Homo sapiens RAD51-human ENCAB406ZKT DNA False 2016-06-14 ENCODE 1 1 100 paired-ended 2 ENCFF273REO 2065653655 Michael Snyder, Stanford 721c77dbe1d53ebdc7acf2bfe6d4a37b SRA:SRR5111736 https://www.encodeproject.org/files/ENCFF809ISJ/@@download/ENCFF809ISJ.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFH/ released borderline replicate concordance, low read depth, mild to moderate bottlenecking ENCFF354UBV fastq reads ENCSR524BUE ChIP-seq EFO:0002067 K562 cell line Homo sapiens RAD51-human ENCAB406ZKT DNA False 2016-06-14 ENCODE 2 1 100 paired-ended 1 ENCFF600KXI 2097124875 Michael Snyder, Stanford 290f57b3ad27712b59e7bafb681420ae SRA:SRR5111735 https://www.encodeproject.org/files/ENCFF354UBV/@@download/ENCFF354UBV.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFD/ released borderline replicate concordance, low read depth, mild to moderate bottlenecking ENCFF273REO fastq reads ENCSR524BUE ChIP-seq EFO:0002067 K562 cell line Homo sapiens RAD51-human ENCAB406ZKT DNA False 2016-06-14 ENCODE 1 1 100 paired-ended 1 ENCFF809ISJ 2038500675 Michael Snyder, Stanford 184ee3a95a419999fba32c73f77326ed SRA:SRR5111736 https://www.encodeproject.org/files/ENCFF273REO/@@download/ENCFF273REO.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFF/ released borderline replicate concordance, low read depth, mild to moderate bottlenecking ENCFF254KBN bam alignments ENCSR524BUE ChIP-seq EFO:0002067 K562 cell line Homo sapiens RAD51-human ENCAB406ZKT DNA False 2016-06-14 ENCODE 2 100 ENCFF354UBV, ENCFF600KXI, ENCFF807MUK 3533250682 ENCODE Processing Pipeline 6c89022e08fee3bec3e38172c72ec927 https://www.encodeproject.org/files/ENCFF254KBN/@@download/ENCFF254KBN.bam hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking ENCFF650WIA bam alignments ENCSR524BUE ChIP-seq EFO:0002067 K562 cell line Homo sapiens RAD51-human ENCAB406ZKT DNA False 2016-06-14 ENCODE 1 100 ENCFF273REO, ENCFF807MUK, ENCFF809ISJ 3278333178 ENCODE Processing Pipeline 3b8d5597c7dd0b6de73dedc3b2f9aa75 https://www.encodeproject.org/files/ENCFF650WIA/@@download/ENCFF650WIA.bam hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking ENCFF523FLJ bigWig signal p-value ENCSR524BUE ChIP-seq EFO:0002067 K562 cell line Homo sapiens RAD51-human ENCAB406ZKT DNA False 2016-06-14 ENCODE 1 ENCFF581ZJL, ENCFF650WIA 1146707680 ENCODE Processing Pipeline 0d501e429513fc7d42922928f459cce4 https://www.encodeproject.org/files/ENCFF523FLJ/@@download/ENCFF523FLJ.bigWig hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking ENCFF696UUH bigWig signal p-value ENCSR524BUE ChIP-seq EFO:0002067 K562 cell line Homo sapiens RAD51-human ENCAB406ZKT DNA False 2016-06-14 ENCODE 2 ENCFF051LWI, ENCFF254KBN 1128882824 ENCODE Processing Pipeline 0eb337cc89a9768ee6fe7ed6decf5a53 https://www.encodeproject.org/files/ENCFF696UUH/@@download/ENCFF696UUH.bigWig hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking ENCFF178AAH bigWig signal p-value ENCSR524BUE ChIP-seq EFO:0002067 K562 cell line Homo sapiens RAD51-human ENCAB406ZKT DNA False 2016-06-14 ENCODE 1, 2 ENCFF051LWI, ENCFF254KBN, ENCFF581ZJL, ENCFF650WIA 1883087999 ENCODE Processing Pipeline 150224c24dde2a566652c5833cd516dd https://www.encodeproject.org/files/ENCFF178AAH/@@download/ENCFF178AAH.bigWig hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking ENCFF376RXA bigWig fold change over control ENCSR524BUE ChIP-seq EFO:0002067 K562 cell line Homo sapiens RAD51-human ENCAB406ZKT DNA False 2016-06-14 ENCODE 1 ENCFF581ZJL, ENCFF650WIA 1031099548 ENCODE Processing Pipeline 7ba7624efabe0ad97c652c9ca9917aca https://www.encodeproject.org/files/ENCFF376RXA/@@download/ENCFF376RXA.bigWig hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking ENCFF696ZVK bigWig fold change over control ENCSR524BUE ChIP-seq EFO:0002067 K562 cell line Homo sapiens RAD51-human ENCAB406ZKT DNA False 2016-06-14 ENCODE 2 ENCFF051LWI, ENCFF254KBN 1071767240 ENCODE Processing Pipeline b801efe66ea57b32a42675de2529fb06 https://www.encodeproject.org/files/ENCFF696ZVK/@@download/ENCFF696ZVK.bigWig hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking ENCFF532QDR bigWig fold change over control ENCSR524BUE ChIP-seq EFO:0002067 K562 cell line Homo sapiens RAD51-human ENCAB406ZKT DNA False 2016-06-14 ENCODE 1, 2 ENCFF051LWI, ENCFF254KBN, ENCFF581ZJL, ENCFF650WIA 1953711276 ENCODE Processing Pipeline e19eae00d74877415523939e1c4744d4 https://www.encodeproject.org/files/ENCFF532QDR/@@download/ENCFF532QDR.bigWig hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking ENCFF124ZGQ bed narrowPeak peaks ENCSR524BUE ChIP-seq EFO:0002067 K562 cell line Homo sapiens RAD51-human ENCAB406ZKT DNA False 2016-06-14 ENCODE 1 ENCFF581ZJL, ENCFF650WIA 6505261 ENCODE Processing Pipeline a84f6e7f61469eeb3bde492893558f04 https://www.encodeproject.org/files/ENCFF124ZGQ/@@download/ENCFF124ZGQ.bed.gz hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking ENCFF457XPX bed narrowPeak peaks ENCSR524BUE ChIP-seq EFO:0002067 K562 cell line Homo sapiens RAD51-human ENCAB406ZKT DNA False 2016-06-14 ENCODE 2 ENCFF051LWI, ENCFF254KBN 6769825 ENCODE Processing Pipeline 4637ee3d180c920116d1cf40c67d71cf https://www.encodeproject.org/files/ENCFF457XPX/@@download/ENCFF457XPX.bed.gz hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking ENCFF922HJN bigBed narrowPeak peaks ENCSR524BUE ChIP-seq EFO:0002067 K562 cell line Homo sapiens RAD51-human ENCAB406ZKT DNA False 2016-06-14 ENCODE 1 ENCFF124ZGQ 13364478 ENCODE Processing Pipeline 298ff81f277443bbfe9ebe86b84d1b48 https://www.encodeproject.org/files/ENCFF922HJN/@@download/ENCFF922HJN.bigBed hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking ENCFF101GPN bigBed narrowPeak peaks ENCSR524BUE ChIP-seq EFO:0002067 K562 cell line Homo sapiens RAD51-human ENCAB406ZKT DNA False 2016-06-14 ENCODE 2 ENCFF457XPX 13324190 ENCODE Processing Pipeline 5b279152520b2a0409567f40590c0376 https://www.encodeproject.org/files/ENCFF101GPN/@@download/ENCFF101GPN.bigBed hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking ENCFF103VVN bed narrowPeak peaks ENCSR524BUE ChIP-seq EFO:0002067 K562 cell line Homo sapiens RAD51-human ENCAB406ZKT DNA False 2016-06-14 ENCODE 1, 2 ENCFF051LWI, ENCFF254KBN, ENCFF581ZJL, ENCFF650WIA 7210514 ENCODE Processing Pipeline 3dc7e986e4f8a8b49de1471db3ef0890 https://www.encodeproject.org/files/ENCFF103VVN/@@download/ENCFF103VVN.bed.gz hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking ENCFF309SXP bigBed narrowPeak peaks ENCSR524BUE ChIP-seq EFO:0002067 K562 cell line Homo sapiens RAD51-human ENCAB406ZKT DNA False 2016-06-14 ENCODE 1, 2 ENCFF103VVN 13227729 ENCODE Processing Pipeline f8644d5e9ffb8e93d5ffa64ac9bb094d https://www.encodeproject.org/files/ENCFF309SXP/@@download/ENCFF309SXP.bigBed hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking ENCFF932WIS bam unfiltered alignments ENCSR524BUE ChIP-seq EFO:0002067 K562 cell line Homo sapiens RAD51-human ENCAB406ZKT DNA False 2016-06-14 ENCODE 1 100 ENCFF273REO, ENCFF643CGH, ENCFF809ISJ 4351703499 ENCODE Processing Pipeline ac0d6475ab09e113237ff77c8eeaff30 https://www.encodeproject.org/files/ENCFF932WIS/@@download/ENCFF932WIS.bam GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking ENCFF132PRX bam unfiltered alignments ENCSR524BUE ChIP-seq EFO:0002067 K562 cell line Homo sapiens RAD51-human ENCAB406ZKT DNA False 2016-06-14 ENCODE 2 100 ENCFF354UBV, ENCFF600KXI, ENCFF643CGH 4487729888 ENCODE Processing Pipeline 726c6b9f1b250f5f0604d7e245f3e8e2 https://www.encodeproject.org/files/ENCFF132PRX/@@download/ENCFF132PRX.bam GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking ENCFF168TBA bam alignments ENCSR524BUE ChIP-seq EFO:0002067 K562 cell line Homo sapiens RAD51-human ENCAB406ZKT DNA False 2016-06-14 ENCODE 1 100 ENCFF273REO, ENCFF643CGH, ENCFF809ISJ 3279239092 ENCODE Processing Pipeline d8a518c944e9b4c56bf622212025506e https://www.encodeproject.org/files/ENCFF168TBA/@@download/ENCFF168TBA.bam GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking ENCFF024NZQ bam alignments ENCSR524BUE ChIP-seq EFO:0002067 K562 cell line Homo sapiens RAD51-human ENCAB406ZKT DNA False 2016-06-14 ENCODE 2 100 ENCFF354UBV, ENCFF600KXI, ENCFF643CGH 3534393611 ENCODE Processing Pipeline f467791454257e40643a1ecdd0ba3cf1 https://www.encodeproject.org/files/ENCFF024NZQ/@@download/ENCFF024NZQ.bam GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking ENCFF895BZW bigWig signal p-value ENCSR524BUE ChIP-seq EFO:0002067 K562 cell line Homo sapiens RAD51-human ENCAB406ZKT DNA False 2016-06-14 ENCODE 1 ENCFF168TBA, ENCFF910IKB 960217421 ENCODE Processing Pipeline 62d97c8e2c400beede16e25d697f0a67 https://www.encodeproject.org/files/ENCFF895BZW/@@download/ENCFF895BZW.bigWig GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking ENCFF611BEF bigWig signal p-value ENCSR524BUE ChIP-seq EFO:0002067 K562 cell line Homo sapiens RAD51-human ENCAB406ZKT DNA False 2016-06-14 ENCODE 2 ENCFF024NZQ, ENCFF227IZS 1002733888 ENCODE Processing Pipeline 5b77e1c7045858874e4ecd67dfb9c3fe https://www.encodeproject.org/files/ENCFF611BEF/@@download/ENCFF611BEF.bigWig GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking ENCFF876CEN bigWig signal p-value ENCSR524BUE ChIP-seq EFO:0002067 K562 cell line Homo sapiens RAD51-human ENCAB406ZKT DNA False 2016-06-14 ENCODE 1, 2 ENCFF024NZQ, ENCFF168TBA, ENCFF227IZS, ENCFF910IKB 1901870889 ENCODE Processing Pipeline fa87730ce2b6a3c849bebc15d5d334dc https://www.encodeproject.org/files/ENCFF876CEN/@@download/ENCFF876CEN.bigWig GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking ENCFF659FNN bigWig fold change over control ENCSR524BUE ChIP-seq EFO:0002067 K562 cell line Homo sapiens RAD51-human ENCAB406ZKT DNA False 2016-06-14 ENCODE 1 ENCFF168TBA, ENCFF910IKB 1030683408 ENCODE Processing Pipeline 89ab8d47e1267b62c0669419f06d453d https://www.encodeproject.org/files/ENCFF659FNN/@@download/ENCFF659FNN.bigWig GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking ENCFF094SFM bigWig fold change over control ENCSR524BUE ChIP-seq EFO:0002067 K562 cell line Homo sapiens RAD51-human ENCAB406ZKT DNA False 2016-06-14 ENCODE 2 ENCFF024NZQ, ENCFF227IZS 1078814420 ENCODE Processing Pipeline ca9362557e70199af1d11515750e0f1b https://www.encodeproject.org/files/ENCFF094SFM/@@download/ENCFF094SFM.bigWig GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking ENCFF715NFE bigWig fold change over control ENCSR524BUE ChIP-seq EFO:0002067 K562 cell line Homo sapiens RAD51-human ENCAB406ZKT DNA False 2016-06-14 ENCODE 1, 2 ENCFF024NZQ, ENCFF168TBA, ENCFF227IZS, ENCFF910IKB 1953245621 ENCODE Processing Pipeline a724b2f1f7a1c128fd5e9743e5ff1f04 https://www.encodeproject.org/files/ENCFF715NFE/@@download/ENCFF715NFE.bigWig GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking ENCFF030QKC bed narrowPeak peaks ENCSR524BUE ChIP-seq EFO:0002067 K562 cell line Homo sapiens RAD51-human ENCAB406ZKT DNA False 2016-06-14 ENCODE 1 ENCFF168TBA, ENCFF910IKB 6293246 ENCODE Processing Pipeline 997d7f8b8a4ac0ac0f0ac4457caa2a48 https://www.encodeproject.org/files/ENCFF030QKC/@@download/ENCFF030QKC.bed.gz GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking ENCFF311WKM bed narrowPeak peaks ENCSR524BUE ChIP-seq EFO:0002067 K562 cell line Homo sapiens RAD51-human ENCAB406ZKT DNA False 2016-06-14 ENCODE 1, 2 ENCFF024NZQ, ENCFF168TBA, ENCFF227IZS, ENCFF910IKB 7151332 ENCODE Processing Pipeline 0b353760a0bc06f90647bebb984bf6a3 https://www.encodeproject.org/files/ENCFF311WKM/@@download/ENCFF311WKM.bed.gz GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking ENCFF083LFT bigBed narrowPeak peaks ENCSR524BUE ChIP-seq EFO:0002067 K562 cell line Homo sapiens RAD51-human ENCAB406ZKT DNA False 2016-06-14 ENCODE 1 ENCFF030QKC 13373288 ENCODE Processing Pipeline 46d8226e4f2393d9f364790f8ed1abab https://www.encodeproject.org/files/ENCFF083LFT/@@download/ENCFF083LFT.bigBed GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking ENCFF817XZG bigBed narrowPeak peaks ENCSR524BUE ChIP-seq EFO:0002067 K562 cell line Homo sapiens RAD51-human ENCAB406ZKT DNA False 2016-06-14 ENCODE 1, 2 ENCFF311WKM 13195106 ENCODE Processing Pipeline 46dcf8c5a1ff57b486a9261c5235ab64 https://www.encodeproject.org/files/ENCFF817XZG/@@download/ENCFF817XZG.bigBed GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking ENCFF472VUW bed narrowPeak peaks ENCSR524BUE ChIP-seq EFO:0002067 K562 cell line Homo sapiens RAD51-human ENCAB406ZKT DNA False 2016-06-14 ENCODE 2 ENCFF024NZQ, ENCFF227IZS 6645313 ENCODE Processing Pipeline 8f69cc1736cecc40ef276565fdb0ef60 https://www.encodeproject.org/files/ENCFF472VUW/@@download/ENCFF472VUW.bed.gz GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking ENCFF691HAG bed narrowPeak conservative idr thresholded peaks ENCSR524BUE ChIP-seq EFO:0002067 K562 cell line Homo sapiens RAD51-human ENCAB406ZKT DNA False 2016-06-14 ENCODE 1, 2 ENCFF030QKC, ENCFF311WKM, ENCFF419RSJ, ENCFF472VUW 203612 ENCODE Processing Pipeline 2d1f61f4db20de2a96edb002c3942e18 https://www.encodeproject.org/files/ENCFF691HAG/@@download/ENCFF691HAG.bed.gz GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking ENCFF353SUL bigBed narrowPeak optimal idr thresholded peaks ENCSR524BUE ChIP-seq EFO:0002067 K562 cell line Homo sapiens RAD51-human ENCAB406ZKT DNA False 2016-06-14 ENCODE 1, 2 ENCFF740OPF 607912 ENCODE Processing Pipeline 0e4a76938e18f87ddb581e9da1853f37 https://www.encodeproject.org/files/ENCFF353SUL/@@download/ENCFF353SUL.bigBed GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking ENCFF740OPF bed narrowPeak optimal idr thresholded peaks ENCSR524BUE ChIP-seq EFO:0002067 K562 cell line Homo sapiens RAD51-human ENCAB406ZKT DNA False 2016-06-14 ENCODE 1, 2 ENCFF030QKC, ENCFF311WKM, ENCFF419RSJ, ENCFF472VUW 316367 ENCODE Processing Pipeline 24167873343f8c9474b61ebc7b91c167 https://www.encodeproject.org/files/ENCFF740OPF/@@download/ENCFF740OPF.bed.gz GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking ENCFF295WAK bigBed narrowPeak conservative idr thresholded peaks ENCSR524BUE ChIP-seq EFO:0002067 K562 cell line Homo sapiens RAD51-human ENCAB406ZKT DNA False 2016-06-14 ENCODE 1, 2 ENCFF691HAG 447575 ENCODE Processing Pipeline c352c63e2045ff8b4b1154ed9651b7d8 https://www.encodeproject.org/files/ENCFF295WAK/@@download/ENCFF295WAK.bigBed GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking ENCFF805RRV bigBed narrowPeak peaks ENCSR524BUE ChIP-seq EFO:0002067 K562 cell line Homo sapiens RAD51-human ENCAB406ZKT DNA False 2016-06-14 ENCODE 2 ENCFF472VUW 13298721 ENCODE Processing Pipeline 3fe37060ff1ea97b3f2450b9c61bd78a https://www.encodeproject.org/files/ENCFF805RRV/@@download/ENCFF805RRV.bigBed GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking ENCFF924XJK bed narrowPeak conservative idr thresholded peaks ENCSR524BUE ChIP-seq EFO:0002067 K562 cell line Homo sapiens RAD51-human ENCAB406ZKT DNA False 2016-06-14 ENCODE 1, 2 ENCFF001TDO, ENCFF103VVN, ENCFF124ZGQ, ENCFF457XPX 187397 ENCODE Processing Pipeline 933c6a190f9167d9a591e3cdecf88352 https://www.encodeproject.org/files/ENCFF924XJK/@@download/ENCFF924XJK.bed.gz hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking ENCFF311KUF bigBed narrowPeak conservative idr thresholded peaks ENCSR524BUE ChIP-seq EFO:0002067 K562 cell line Homo sapiens RAD51-human ENCAB406ZKT DNA False 2016-06-14 ENCODE 1, 2 ENCFF924XJK 424667 ENCODE Processing Pipeline 97390bfd61c5a8a311104cda71ffc3a0 https://www.encodeproject.org/files/ENCFF311KUF/@@download/ENCFF311KUF.bigBed hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking ENCFF096XMD bed narrowPeak optimal idr thresholded peaks ENCSR524BUE ChIP-seq EFO:0002067 K562 cell line Homo sapiens RAD51-human ENCAB406ZKT DNA False 2016-06-14 ENCODE 1, 2 ENCFF001TDO, ENCFF103VVN, ENCFF124ZGQ, ENCFF457XPX 282692 ENCODE Processing Pipeline 59332e8ca90fc4507468b673efd55907 https://www.encodeproject.org/files/ENCFF096XMD/@@download/ENCFF096XMD.bed.gz hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking ENCFF973SKX bigBed narrowPeak optimal idr thresholded peaks ENCSR524BUE ChIP-seq EFO:0002067 K562 cell line Homo sapiens RAD51-human ENCAB406ZKT DNA False 2016-06-14 ENCODE 1, 2 ENCFF096XMD 555499 ENCODE Processing Pipeline 3c9323c3a292a6297bd31fc03f335f36 https://www.encodeproject.org/files/ENCFF973SKX/@@download/ENCFF973SKX.bigBed hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking ENCFF000BVU bigBed broadPeak peaks ENCSR000AVD ChIP-seq EFO:0002067 K562 cell line Homo sapiens CHD7-human ENCAB000AFI DNA see document see document False 2012-08-06 ENCODE ENCFF001SYZ 865964 Bradley Bernstein, Broad b4bf5727fa977c03722556acb991aeab https://www.encodeproject.org/files/ENCFF000BVU/@@download/ENCFF000BVU.bigBed hg19 archived inconsistent platforms, low read depth, mild to moderate bottlenecking, low read length missing raw data in replicate ENCFF000BVV bam alignments ENCSR000AVD ChIP-seq EFO:0002067 K562 cell line Homo sapiens CHD7-human ENCAB000AFI DNA see document see document False 2012-08-06 ENCODE 1 1 991149763 Bradley Bernstein, Broad 87d9a7a6e897989b2c96406714dfa957 https://www.encodeproject.org/files/ENCFF000BVV/@@download/ENCFF000BVV.bam hg19 archived inconsistent platforms, low read depth, mild to moderate bottlenecking, low read length missing raw data in replicate, missing derived_from ENCFF000BVW bigWig signal ENCSR000AVD ChIP-seq EFO:0002067 K562 cell line Homo sapiens CHD7-human ENCAB000AFI DNA see document see document False 2012-08-06 ENCODE 333365117 Bradley Bernstein, Broad ecd571d76f351e888d8708ee05f13da6 https://www.encodeproject.org/files/ENCFF000BVW/@@download/ENCFF000BVW.bigWig hg19 archived inconsistent platforms, low read depth, mild to moderate bottlenecking, low read length missing raw data in replicate, missing derived_from ENCFF000BWJ fastq reads ENCSR000AVD ChIP-seq EFO:0002067 K562 cell line Homo sapiens CHD7-human ENCAB000AFI DNA see document see document False 2012-08-06 ENCODE 1 1 36 single-ended 1316952399 Bradley Bernstein, Broad 3bba58cf1b8db5f2f7cf722d889fd46f https://www.encodeproject.org/files/ENCFF000BWJ/@@download/ENCFF000BWJ.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000BWK/ released inconsistent platforms, low read depth, mild to moderate bottlenecking, low read length missing raw data in replicate ENCFF001SYZ bed broadPeak peaks ENCSR000AVD ChIP-seq EFO:0002067 K562 cell line Homo sapiens CHD7-human ENCAB000AFI DNA see document see document False 2012-08-06 ENCODE 499731 Bradley Bernstein, Broad 79b385d896957e36751996871dfea459 https://www.encodeproject.org/files/ENCFF001SYZ/@@download/ENCFF001SYZ.bed.gz hg19 archived inconsistent platforms, low read depth, mild to moderate bottlenecking, low read length missing raw data in replicate, missing derived_from ENCFF908WCV fastq reads ENCSR000AVD ChIP-seq EFO:0002067 K562 cell line Homo sapiens CHD7-human ENCAB000AFI DNA see document see document False 2012-08-06 ENCODE 2 1 25 paired-ended 2 ENCFF045UAF 1195907408 Bradley Bernstein, Broad 29ba983e3c858c2315639f6c8544fba2 https://www.encodeproject.org/files/ENCFF908WCV/@@download/ENCFF908WCV.fastq.gz Illumina HiSeq 2500 archived inconsistent platforms, low read depth, mild to moderate bottlenecking, low read length missing raw data in replicate missing controlled_by ENCFF045UAF fastq reads ENCSR000AVD ChIP-seq EFO:0002067 K562 cell line Homo sapiens CHD7-human ENCAB000AFI DNA see document see document False 2012-08-06 ENCODE 2 1 25 paired-ended 1 ENCFF908WCV 1186035930 Bradley Bernstein, Broad 7170fd6ba7a4fc1170c3b77fd4db4cd0 https://www.encodeproject.org/files/ENCFF045UAF/@@download/ENCFF045UAF.fastq.gz Illumina HiSeq 2500 archived inconsistent platforms, low read depth, mild to moderate bottlenecking, low read length missing raw data in replicate missing controlled_by ENCFF747PIH bam alignments ENCSR000AVD ChIP-seq EFO:0002067 K562 cell line Homo sapiens CHD7-human ENCAB000AFI DNA see document see document False 2012-08-06 ENCODE 1 36 ENCFF000BWJ, ENCFF643CGH 781476154 ENCODE Processing Pipeline 69998c0b9c9df2c873db25e370c46c35 https://www.encodeproject.org/files/ENCFF747PIH/@@download/ENCFF747PIH.bam GRCh38 released inconsistent platforms, low read depth, mild to moderate bottlenecking, low read length missing raw data in replicate ENCFF059QUS bam unfiltered alignments ENCSR000AVD ChIP-seq EFO:0002067 K562 cell line Homo sapiens CHD7-human ENCAB000AFI DNA see document see document False 2012-08-06 ENCODE 1 36 ENCFF000BWJ, ENCFF643CGH 1647644374 ENCODE Processing Pipeline 9a21d027ec455ddfa89424e61586a1af https://www.encodeproject.org/files/ENCFF059QUS/@@download/ENCFF059QUS.bam GRCh38 released inconsistent platforms, low read depth, mild to moderate bottlenecking, low read length missing raw data in replicate ENCFF236OVG bam unfiltered alignments ENCSR000AVD ChIP-seq EFO:0002067 K562 cell line Homo sapiens CHD7-human ENCAB000AFI DNA see document see document False 2012-08-06 ENCODE 1 36 ENCFF000BWJ, ENCFF807MUK 1641099929 ENCODE Processing Pipeline bb1638b5bd7449142fa6d5045c3a4a46 https://www.encodeproject.org/files/ENCFF236OVG/@@download/ENCFF236OVG.bam hg19 released inconsistent platforms, low read depth, mild to moderate bottlenecking, low read length missing raw data in replicate ENCFF402MIS bam alignments ENCSR000AVD ChIP-seq EFO:0002067 K562 cell line Homo sapiens CHD7-human ENCAB000AFI DNA see document see document False 2012-08-06 ENCODE 1 36 ENCFF000BWJ, ENCFF807MUK 782080591 ENCODE Processing Pipeline 14f591c0e83b47ce13d17d079d32c6a3 https://www.encodeproject.org/files/ENCFF402MIS/@@download/ENCFF402MIS.bam hg19 released inconsistent platforms, low read depth, mild to moderate bottlenecking, low read length missing raw data in replicate ENCFF000YKD bam alignments ENCSR000EGS ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 1 ENCFF000YKZ 307347314 Michael Snyder, Stanford b6cf994d3e493ca6e6721be55b9fe07f https://www.encodeproject.org/files/ENCFF000YKD/@@download/ENCFF000YKD.bam hg19 archived borderline replicate concordance, low read depth, low read length biological replicates with identical biosample control insufficient read depth missing control alignments ENCFF000YKE bigBed narrowPeak peaks ENCSR000EGS ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE ENCFF001VMS 1818330 Michael Snyder, Stanford a5707b53e662b8b8e0aebb6ab103ba28 https://www.encodeproject.org/files/ENCFF000YKE/@@download/ENCFF000YKE.bigBed hg19 archived borderline replicate concordance, low read depth, low read length biological replicates with identical biosample control insufficient read depth missing control alignments ENCFF000YKF bam alignments ENCSR000EGS ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 2 ENCFF000YLA 414398470 Michael Snyder, Stanford 8f6edf164b9db5934f598cbf6c8156e8 https://www.encodeproject.org/files/ENCFF000YKF/@@download/ENCFF000YKF.bam hg19 archived borderline replicate concordance, low read depth, low read length biological replicates with identical biosample control insufficient read depth missing control alignments ENCFF000YKG bigWig signal ENCSR000EGS ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 250311859 Michael Snyder, Stanford 46987ad2b599d83801522a8ce14317af https://www.encodeproject.org/files/ENCFF000YKG/@@download/ENCFF000YKG.bigWig hg19 archived borderline replicate concordance, low read depth, low read length biological replicates with identical biosample, missing derived_from control insufficient read depth missing control alignments ENCFF000YKZ fastq reads ENCSR000EGS ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 1 1 36 single-ended 1047672501 Michael Snyder, Stanford dccd38a50739ebd3aee89d776745b94d https://www.encodeproject.org/files/ENCFF000YKZ/@@download/ENCFF000YKZ.fastq.gz Illumina Genome Analyzer /files/ENCFF000YPM/ released borderline replicate concordance, low read depth, low read length biological replicates with identical biosample control insufficient read depth missing control alignments ENCFF000YLA fastq reads ENCSR000EGS ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 2 1 36 single-ended 775033480 Michael Snyder, Stanford 8a340f8d8b918f1449c80213033e4a52 https://www.encodeproject.org/files/ENCFF000YLA/@@download/ENCFF000YLA.fastq.gz Illumina Genome Analyzer /files/ENCFF000YPM/ released borderline replicate concordance, low read depth, low read length biological replicates with identical biosample control insufficient read depth missing control alignments ENCFF001VMS bed narrowPeak peaks ENCSR000EGS ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 746853 Michael Snyder, Stanford a578f5369f477f5344dcab4b71263c6b https://www.encodeproject.org/files/ENCFF001VMS/@@download/ENCFF001VMS.bed.gz hg19 archived borderline replicate concordance, low read depth, low read length biological replicates with identical biosample, missing derived_from control insufficient read depth missing control alignments ENCFF002CWF bed narrowPeak optimal idr thresholded peaks ENCSR000EGS ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 680076 ENCODE Consortium Analysis Working Group 97fdb036134d390f6ab03921b34aaffe https://www.encodeproject.org/files/ENCFF002CWF/@@download/ENCFF002CWF.bed.gz hg19 archived borderline replicate concordance, low read depth, low read length biological replicates with identical biosample, missing derived_from control insufficient read depth missing control alignments ENCFF581MRK bigBed narrowPeak optimal idr thresholded peaks ENCSR000EGS ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE ENCFF002CWF 1446585 ENCODE Consortium 4513b00cbab6f4a0b89a6a514bfc1a5c https://www.encodeproject.org/files/ENCFF581MRK/@@download/ENCFF581MRK.bigBed hg19 archived borderline replicate concordance, low read depth, low read length biological replicates with identical biosample control insufficient read depth missing control alignments ENCFF239WGU bam alignments ENCSR000EGS ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 1 27 ENCFF000YKZ, ENCFF643CGH 541778030 ENCODE Processing Pipeline defe79b1ad642d1ee6703330b7824c49 https://www.encodeproject.org/files/ENCFF239WGU/@@download/ENCFF239WGU.bam GRCh38 released borderline replicate concordance, low read depth, low read length biological replicates with identical biosample control insufficient read depth missing control alignments ENCFF836IMK bam alignments ENCSR000EGS ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 2 27 ENCFF000YLA, ENCFF643CGH 502999154 ENCODE Processing Pipeline 6530c1ad8bcb55773d9bc36097c98042 https://www.encodeproject.org/files/ENCFF836IMK/@@download/ENCFF836IMK.bam GRCh38 released borderline replicate concordance, low read depth, low read length biological replicates with identical biosample control insufficient read depth missing control alignments ENCFF229LOS bam unfiltered alignments ENCSR000EGS ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 2 27 ENCFF000YLA, ENCFF643CGH 813041979 ENCODE Processing Pipeline a56ab5192573652d2804de56fbe886c7 https://www.encodeproject.org/files/ENCFF229LOS/@@download/ENCFF229LOS.bam GRCh38 released borderline replicate concordance, low read depth, low read length biological replicates with identical biosample control insufficient read depth missing control alignments ENCFF845YTU bigWig fold change over control ENCSR000EGS ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 1 ENCFF239WGU 206470255 ENCODE Processing Pipeline e70ca87f7ce339062e8d1b34ba6d439e https://www.encodeproject.org/files/ENCFF845YTU/@@download/ENCFF845YTU.bigWig GRCh38 released borderline replicate concordance, low read depth, low read length biological replicates with identical biosample control insufficient read depth missing control alignments ENCFF207JFR bam unfiltered alignments ENCSR000EGS ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 1 27 ENCFF000YKZ, ENCFF643CGH 1049437869 ENCODE Processing Pipeline a2aef3d0e12c7a3685fa8993f34c0e85 https://www.encodeproject.org/files/ENCFF207JFR/@@download/ENCFF207JFR.bam GRCh38 released borderline replicate concordance, low read depth, low read length biological replicates with identical biosample control insufficient read depth missing control alignments ENCFF389SMU bigWig signal p-value ENCSR000EGS ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 1 ENCFF239WGU 234113786 ENCODE Processing Pipeline 3c780899db1bbe18857b690573987613 https://www.encodeproject.org/files/ENCFF389SMU/@@download/ENCFF389SMU.bigWig GRCh38 released borderline replicate concordance, low read depth, low read length biological replicates with identical biosample control insufficient read depth missing control alignments ENCFF139YUD bigWig signal p-value ENCSR000EGS ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF239WGU, ENCFF836IMK 231927298 ENCODE Processing Pipeline 0331c4d5e1739f83eddfd03072a1e07c https://www.encodeproject.org/files/ENCFF139YUD/@@download/ENCFF139YUD.bigWig GRCh38 released borderline replicate concordance, low read depth, low read length biological replicates with identical biosample control insufficient read depth missing control alignments ENCFF023ZEL bigWig fold change over control ENCSR000EGS ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 2 ENCFF836IMK 231679736 ENCODE Processing Pipeline 3580cdb652159f360a1e715c0ec911bb https://www.encodeproject.org/files/ENCFF023ZEL/@@download/ENCFF023ZEL.bigWig GRCh38 released borderline replicate concordance, low read depth, low read length biological replicates with identical biosample control insufficient read depth missing control alignments ENCFF053RYJ bigBed narrowPeak peaks ENCSR000EGS ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 2 ENCFF017FSY 12575741 ENCODE Processing Pipeline cc6401c3831c3b2216e6fce646b530c6 https://www.encodeproject.org/files/ENCFF053RYJ/@@download/ENCFF053RYJ.bigBed GRCh38 released borderline replicate concordance, low read depth, low read length biological replicates with identical biosample control insufficient read depth missing control alignments ENCFF568GZL bigBed narrowPeak peaks ENCSR000EGS ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF233XAJ 12944959 ENCODE Processing Pipeline 9aad78fda7923926759b4619a005d693 https://www.encodeproject.org/files/ENCFF568GZL/@@download/ENCFF568GZL.bigBed GRCh38 released borderline replicate concordance, low read depth, low read length biological replicates with identical biosample control insufficient read depth missing control alignments ENCFF838NIW bed narrowPeak conservative idr thresholded peaks ENCSR000EGS ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF017FSY, ENCFF208AQB, ENCFF233XAJ, ENCFF419RSJ 475230 ENCODE Processing Pipeline 0992be8bd52a2579a88603345856d39e https://www.encodeproject.org/files/ENCFF838NIW/@@download/ENCFF838NIW.bed.gz GRCh38 released borderline replicate concordance, low read depth, low read length biological replicates with identical biosample control insufficient read depth missing control alignments ENCFF005BUL bigBed narrowPeak optimal idr thresholded peaks ENCSR000EGS ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF605WXD 1201176 ENCODE Processing Pipeline c854b53e6e2ca071b1def685011e53ee https://www.encodeproject.org/files/ENCFF005BUL/@@download/ENCFF005BUL.bigBed GRCh38 released borderline replicate concordance, low read depth, low read length biological replicates with identical biosample control insufficient read depth missing control alignments ENCFF605WXD bed narrowPeak optimal idr thresholded peaks ENCSR000EGS ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF017FSY, ENCFF208AQB, ENCFF233XAJ, ENCFF419RSJ 653860 ENCODE Processing Pipeline 2650cfd5835a8475a07ff6d8c27ed722 https://www.encodeproject.org/files/ENCFF605WXD/@@download/ENCFF605WXD.bed.gz GRCh38 released borderline replicate concordance, low read depth, low read length biological replicates with identical biosample control insufficient read depth missing control alignments ENCFF266TBL bigWig signal p-value ENCSR000EGS ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 2 ENCFF836IMK 237621134 ENCODE Processing Pipeline baff4b7373d173f19cfa1b4b2586f0af https://www.encodeproject.org/files/ENCFF266TBL/@@download/ENCFF266TBL.bigWig GRCh38 released borderline replicate concordance, low read depth, low read length biological replicates with identical biosample control insufficient read depth missing control alignments ENCFF667QJZ bigWig fold change over control ENCSR000EGS ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF239WGU, ENCFF836IMK 392424463 ENCODE Processing Pipeline 76d2acd9b09e2ec8284fdf457a8c9114 https://www.encodeproject.org/files/ENCFF667QJZ/@@download/ENCFF667QJZ.bigWig GRCh38 released borderline replicate concordance, low read depth, low read length biological replicates with identical biosample control insufficient read depth missing control alignments ENCFF208AQB bed narrowPeak peaks ENCSR000EGS ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 1 ENCFF239WGU 4216435 ENCODE Processing Pipeline 0c9221e75e6e0dea22f90ce9b71c0f1d https://www.encodeproject.org/files/ENCFF208AQB/@@download/ENCFF208AQB.bed.gz GRCh38 released borderline replicate concordance, low read depth, low read length biological replicates with identical biosample control insufficient read depth missing control alignments ENCFF552AMR bigBed narrowPeak conservative idr thresholded peaks ENCSR000EGS ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF838NIW 934126 ENCODE Processing Pipeline bcf458b50fe9075cef2f50603302c571 https://www.encodeproject.org/files/ENCFF552AMR/@@download/ENCFF552AMR.bigBed GRCh38 released borderline replicate concordance, low read depth, low read length biological replicates with identical biosample control insufficient read depth missing control alignments ENCFF017FSY bed narrowPeak peaks ENCSR000EGS ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 2 ENCFF836IMK 5174718 ENCODE Processing Pipeline 2d207f4129d811671fae0cb3bed472a3 https://www.encodeproject.org/files/ENCFF017FSY/@@download/ENCFF017FSY.bed.gz GRCh38 released borderline replicate concordance, low read depth, low read length biological replicates with identical biosample control insufficient read depth missing control alignments ENCFF233XAJ bed narrowPeak peaks ENCSR000EGS ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF239WGU, ENCFF836IMK 5448557 ENCODE Processing Pipeline e11f25c8c3f6dfba4dc21c10390ea330 https://www.encodeproject.org/files/ENCFF233XAJ/@@download/ENCFF233XAJ.bed.gz GRCh38 released borderline replicate concordance, low read depth, low read length biological replicates with identical biosample control insufficient read depth missing control alignments ENCFF974GOI bigBed narrowPeak peaks ENCSR000EGS ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 1 ENCFF208AQB 9882927 ENCODE Processing Pipeline f19522ef6b4b1a73a82d59c752a60211 https://www.encodeproject.org/files/ENCFF974GOI/@@download/ENCFF974GOI.bigBed GRCh38 released borderline replicate concordance, low read depth, low read length biological replicates with identical biosample control insufficient read depth missing control alignments ENCFF930SEV bigWig signal p-value ENCSR000EGS ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 2 ENCFF287WTN, ENCFF632LZV 237919075 ENCODE Processing Pipeline 9ba594836b7f591ecef1afa258ac0af2 https://www.encodeproject.org/files/ENCFF930SEV/@@download/ENCFF930SEV.bigWig hg19 released borderline replicate concordance, low read depth, low read length biological replicates with identical biosample control insufficient read depth missing control alignments ENCFF264RNQ bigWig signal p-value ENCSR000EGS ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF287WTN, ENCFF309ANN, ENCFF632LZV 232254018 ENCODE Processing Pipeline c0635cb00608b385592a05468288a8d3 https://www.encodeproject.org/files/ENCFF264RNQ/@@download/ENCFF264RNQ.bigWig hg19 released borderline replicate concordance, low read depth, low read length biological replicates with identical biosample control insufficient read depth missing control alignments ENCFF827QUC bigWig fold change over control ENCSR000EGS ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF287WTN, ENCFF309ANN, ENCFF632LZV 390215236 ENCODE Processing Pipeline 1861a9181ac1e7420e493d2a80885d95 https://www.encodeproject.org/files/ENCFF827QUC/@@download/ENCFF827QUC.bigWig hg19 released borderline replicate concordance, low read depth, low read length biological replicates with identical biosample control insufficient read depth missing control alignments ENCFF199SKV bed narrowPeak peaks ENCSR000EGS ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF287WTN, ENCFF309ANN, ENCFF632LZV 5455388 ENCODE Processing Pipeline 9c12aa3979b8f0bddc5305ce0e8450b8 https://www.encodeproject.org/files/ENCFF199SKV/@@download/ENCFF199SKV.bed.gz hg19 released borderline replicate concordance, low read depth, low read length biological replicates with identical biosample control insufficient read depth missing control alignments ENCFF648HBS bigBed narrowPeak peaks ENCSR000EGS ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 2 ENCFF859MQB 12542128 ENCODE Processing Pipeline 4f17b6b9900ea4bf49398333d315a544 https://www.encodeproject.org/files/ENCFF648HBS/@@download/ENCFF648HBS.bigBed hg19 released borderline replicate concordance, low read depth, low read length biological replicates with identical biosample control insufficient read depth missing control alignments ENCFF069XXQ bigWig signal p-value ENCSR000EGS ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 1 ENCFF287WTN, ENCFF309ANN 234113092 ENCODE Processing Pipeline d5444574b5c776d84de0a8b60407743a https://www.encodeproject.org/files/ENCFF069XXQ/@@download/ENCFF069XXQ.bigWig hg19 released borderline replicate concordance, low read depth, low read length biological replicates with identical biosample control insufficient read depth missing control alignments ENCFF251ACY bam unfiltered alignments ENCSR000EGS ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 2 27 ENCFF000YLA, ENCFF807MUK 811233721 ENCODE Processing Pipeline ec92f9f5217e06f6c8d60006d9923fc7 https://www.encodeproject.org/files/ENCFF251ACY/@@download/ENCFF251ACY.bam hg19 released borderline replicate concordance, low read depth, low read length biological replicates with identical biosample control insufficient read depth missing control alignments ENCFF223UHF bam unfiltered alignments ENCSR000EGS ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 1 27 ENCFF000YKZ, ENCFF807MUK 1046105927 ENCODE Processing Pipeline 8d6e52cd4e38441e0fa855c4924357c8 https://www.encodeproject.org/files/ENCFF223UHF/@@download/ENCFF223UHF.bam hg19 released borderline replicate concordance, low read depth, low read length biological replicates with identical biosample control insufficient read depth missing control alignments ENCFF309ANN bam alignments ENCSR000EGS ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 1 27 ENCFF000YKZ, ENCFF807MUK 542388301 ENCODE Processing Pipeline 6b6a99af44f700dffa9085cc1232a151 https://www.encodeproject.org/files/ENCFF309ANN/@@download/ENCFF309ANN.bam hg19 released borderline replicate concordance, low read depth, low read length biological replicates with identical biosample control insufficient read depth missing control alignments ENCFF632LZV bam alignments ENCSR000EGS ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 2 27 ENCFF000YLA, ENCFF807MUK 503661324 ENCODE Processing Pipeline a21b60f339ac2430f9cc5088fe62938f https://www.encodeproject.org/files/ENCFF632LZV/@@download/ENCFF632LZV.bam hg19 released borderline replicate concordance, low read depth, low read length biological replicates with identical biosample control insufficient read depth missing control alignments ENCFF453EDH bigWig fold change over control ENCSR000EGS ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 2 ENCFF287WTN, ENCFF632LZV 234148742 ENCODE Processing Pipeline ea437ebfcd7dcc7f72e346796d7154d9 https://www.encodeproject.org/files/ENCFF453EDH/@@download/ENCFF453EDH.bigWig hg19 released borderline replicate concordance, low read depth, low read length biological replicates with identical biosample control insufficient read depth missing control alignments ENCFF859MQB bed narrowPeak peaks ENCSR000EGS ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 2 ENCFF287WTN, ENCFF632LZV 5152875 ENCODE Processing Pipeline 71baec99e51af3ddd25dbb5560627e68 https://www.encodeproject.org/files/ENCFF859MQB/@@download/ENCFF859MQB.bed.gz hg19 released borderline replicate concordance, low read depth, low read length biological replicates with identical biosample control insufficient read depth missing control alignments ENCFF993DUY bigBed narrowPeak peaks ENCSR000EGS ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF199SKV 12949016 ENCODE Processing Pipeline e34e3378a1de15df05f159180ad01d99 https://www.encodeproject.org/files/ENCFF993DUY/@@download/ENCFF993DUY.bigBed hg19 released borderline replicate concordance, low read depth, low read length biological replicates with identical biosample control insufficient read depth missing control alignments ENCFF884VNW bed narrowPeak conservative idr thresholded peaks ENCSR000EGS ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF001TDO, ENCFF199SKV, ENCFF357NBU, ENCFF859MQB 476665 ENCODE Processing Pipeline e800acc223086c11337a341f66ad6dc5 https://www.encodeproject.org/files/ENCFF884VNW/@@download/ENCFF884VNW.bed.gz hg19 released borderline replicate concordance, low read depth, low read length biological replicates with identical biosample control insufficient read depth missing control alignments ENCFF362LBZ bigWig fold change over control ENCSR000EGS ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 1 ENCFF287WTN, ENCFF309ANN 207384084 ENCODE Processing Pipeline 59a38cc8d2cd29c50296902c2593b12b https://www.encodeproject.org/files/ENCFF362LBZ/@@download/ENCFF362LBZ.bigWig hg19 released borderline replicate concordance, low read depth, low read length biological replicates with identical biosample control insufficient read depth missing control alignments ENCFF381YCY bigBed narrowPeak conservative idr thresholded peaks ENCSR000EGS ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF884VNW 935390 ENCODE Processing Pipeline dff05483be6b29d1acf61c3e88975b6b https://www.encodeproject.org/files/ENCFF381YCY/@@download/ENCFF381YCY.bigBed hg19 released borderline replicate concordance, low read depth, low read length biological replicates with identical biosample control insufficient read depth missing control alignments ENCFF033RRL bigBed narrowPeak optimal idr thresholded peaks ENCSR000EGS ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF676YJE 1174532 ENCODE Processing Pipeline c7ebdb9298cf01f1f06adb42c3a71cb7 https://www.encodeproject.org/files/ENCFF033RRL/@@download/ENCFF033RRL.bigBed hg19 released borderline replicate concordance, low read depth, low read length biological replicates with identical biosample control insufficient read depth missing control alignments ENCFF357NBU bed narrowPeak peaks ENCSR000EGS ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 1 ENCFF287WTN, ENCFF309ANN 4223795 ENCODE Processing Pipeline 69a2a9af103dd227176648e42edaee29 https://www.encodeproject.org/files/ENCFF357NBU/@@download/ENCFF357NBU.bed.gz hg19 released borderline replicate concordance, low read depth, low read length biological replicates with identical biosample control insufficient read depth missing control alignments ENCFF676YJE bed narrowPeak optimal idr thresholded peaks ENCSR000EGS ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF001TDO, ENCFF199SKV, ENCFF357NBU, ENCFF859MQB 636144 ENCODE Processing Pipeline ffdaabb82feb7296592767b1c23b26fa https://www.encodeproject.org/files/ENCFF676YJE/@@download/ENCFF676YJE.bed.gz hg19 released borderline replicate concordance, low read depth, low read length biological replicates with identical biosample control insufficient read depth missing control alignments ENCFF141KWE bigBed narrowPeak peaks ENCSR000EGS ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 1 ENCFF357NBU 9897713 ENCODE Processing Pipeline e776752bb058a5d16cfecfe21732fd81 https://www.encodeproject.org/files/ENCFF141KWE/@@download/ENCFF141KWE.bigBed hg19 released borderline replicate concordance, low read depth, low read length biological replicates with identical biosample control insufficient read depth missing control alignments ENCFF632EVH fastq reads ENCSR642VZY ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM4B-human ENCAB000BQH DNA False 2016-04-01 ENCODE 2 1 50 single-ended 1144149823 Richard Myers, HAIB 2fca44161d69ae1e9275d774444f4708 SRA:SRR5339044 https://www.encodeproject.org/files/ENCFF632EVH/@@download/ENCFF632EVH.fastq.gz Illumina HiSeq 2000 /files/ENCFF001RVO/ released borderline replicate concordance, low read depth, antibody characterized with exemption ENCFF778YOV fastq reads ENCSR642VZY ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM4B-human ENCAB000BQH DNA False 2016-04-01 ENCODE 1 1 50 single-ended 1227270161 Richard Myers, HAIB 7f573dad0ad72708d604001e5ceb271b SRA:SRR5339043 https://www.encodeproject.org/files/ENCFF778YOV/@@download/ENCFF778YOV.fastq.gz Illumina HiSeq 2000 /files/ENCFF913JVQ/ released borderline replicate concordance, low read depth, antibody characterized with exemption ENCFF697MUV bam alignments ENCSR642VZY ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM4B-human ENCAB000BQH DNA False 2016-04-01 ENCODE 2 50 ENCFF632EVH, ENCFF807MUK 944710007 ENCODE Processing Pipeline 5c982e98a27b3ad0d4780086a8bca65b https://www.encodeproject.org/files/ENCFF697MUV/@@download/ENCFF697MUV.bam hg19 released borderline replicate concordance, low read depth, antibody characterized with exemption ENCFF687NJZ bam alignments ENCSR642VZY ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM4B-human ENCAB000BQH DNA False 2016-04-01 ENCODE 1 50 ENCFF778YOV, ENCFF807MUK 891430692 ENCODE Processing Pipeline 53b1ad257fe94fd185e7dc8f883ca17f https://www.encodeproject.org/files/ENCFF687NJZ/@@download/ENCFF687NJZ.bam hg19 released borderline replicate concordance, low read depth, antibody characterized with exemption ENCFF310GOY bigWig signal p-value ENCSR642VZY ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM4B-human ENCAB000BQH DNA False 2016-04-01 ENCODE 1 ENCFF444TNY, ENCFF687NJZ 648378808 ENCODE Processing Pipeline f81ae139cfbcf2ae5197de8b68de73e1 https://www.encodeproject.org/files/ENCFF310GOY/@@download/ENCFF310GOY.bigWig hg19 released borderline replicate concordance, low read depth, antibody characterized with exemption ENCFF970CAM bigWig signal p-value ENCSR642VZY ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM4B-human ENCAB000BQH DNA False 2016-04-01 ENCODE 2 ENCFF061QOJ, ENCFF697MUV 657631386 ENCODE Processing Pipeline 0bfe923a662a23fc608cf75b8a07ff50 https://www.encodeproject.org/files/ENCFF970CAM/@@download/ENCFF970CAM.bigWig hg19 released borderline replicate concordance, low read depth, antibody characterized with exemption ENCFF313MJY bigWig fold change over control ENCSR642VZY ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM4B-human ENCAB000BQH DNA False 2016-04-01 ENCODE 1 ENCFF444TNY, ENCFF687NJZ 436972936 ENCODE Processing Pipeline 9d8f11ea62616717d5ceb7cf25da6eda https://www.encodeproject.org/files/ENCFF313MJY/@@download/ENCFF313MJY.bigWig hg19 released borderline replicate concordance, low read depth, antibody characterized with exemption ENCFF741SCF bigWig fold change over control ENCSR642VZY ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM4B-human ENCAB000BQH DNA False 2016-04-01 ENCODE 2 ENCFF061QOJ, ENCFF697MUV 426336250 ENCODE Processing Pipeline e99bc7eb65779c7a46b1e405a4f53162 https://www.encodeproject.org/files/ENCFF741SCF/@@download/ENCFF741SCF.bigWig hg19 released borderline replicate concordance, low read depth, antibody characterized with exemption ENCFF003TEQ bam unfiltered alignments ENCSR642VZY ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM4B-human ENCAB000BQH DNA False 2016-04-01 ENCODE 2 50 ENCFF632EVH, ENCFF643CGH 1249239208 ENCODE Processing Pipeline d4fd6e5ed0da170ed9f2b7c53fdb7339 https://www.encodeproject.org/files/ENCFF003TEQ/@@download/ENCFF003TEQ.bam GRCh38 released borderline replicate concordance, low read depth, antibody characterized with exemption ENCFF620QZO bam unfiltered alignments ENCSR642VZY ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM4B-human ENCAB000BQH DNA False 2016-04-01 ENCODE 1 50 ENCFF643CGH, ENCFF778YOV 1304997768 ENCODE Processing Pipeline 7ce495bc91c244c8b1fa449a12d9dd8f https://www.encodeproject.org/files/ENCFF620QZO/@@download/ENCFF620QZO.bam GRCh38 released borderline replicate concordance, low read depth, antibody characterized with exemption ENCFF330ZVF bam alignments ENCSR642VZY ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM4B-human ENCAB000BQH DNA False 2016-04-01 ENCODE 2 50 ENCFF632EVH, ENCFF643CGH 944311289 ENCODE Processing Pipeline 82298dd43c4061f39801ced2c5b15aa6 https://www.encodeproject.org/files/ENCFF330ZVF/@@download/ENCFF330ZVF.bam GRCh38 released borderline replicate concordance, low read depth, antibody characterized with exemption ENCFF066TDG bam alignments ENCSR642VZY ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM4B-human ENCAB000BQH DNA False 2016-04-01 ENCODE 1 50 ENCFF643CGH, ENCFF778YOV 890708156 ENCODE Processing Pipeline ad986b20689248196fd426f0c9912b97 https://www.encodeproject.org/files/ENCFF066TDG/@@download/ENCFF066TDG.bam GRCh38 released borderline replicate concordance, low read depth, antibody characterized with exemption ENCFF166TDZ bigWig signal p-value ENCSR642VZY ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM4B-human ENCAB000BQH DNA False 2016-04-01 ENCODE 1 ENCFF066TDG, ENCFF162ZOO 611713934 ENCODE Processing Pipeline 9b9600155f139c72d626fad85d1de1cb https://www.encodeproject.org/files/ENCFF166TDZ/@@download/ENCFF166TDZ.bigWig GRCh38 released borderline replicate concordance, low read depth, antibody characterized with exemption ENCFF118JMD bigWig signal p-value ENCSR642VZY ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM4B-human ENCAB000BQH DNA False 2016-04-01 ENCODE 2 ENCFF330ZVF, ENCFF332SVJ 726040323 ENCODE Processing Pipeline 9365018c19107472539ce7205cf941e0 https://www.encodeproject.org/files/ENCFF118JMD/@@download/ENCFF118JMD.bigWig GRCh38 released borderline replicate concordance, low read depth, antibody characterized with exemption ENCFF675ZYU bigWig signal p-value ENCSR642VZY ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM4B-human ENCAB000BQH DNA False 2016-04-01 ENCODE 1, 2 ENCFF066TDG, ENCFF162ZOO, ENCFF330ZVF, ENCFF332SVJ 1239012654 ENCODE Processing Pipeline ce5193edebf5d324279b5264285019fe https://www.encodeproject.org/files/ENCFF675ZYU/@@download/ENCFF675ZYU.bigWig GRCh38 released borderline replicate concordance, low read depth, antibody characterized with exemption ENCFF583AKO bigWig fold change over control ENCSR642VZY ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM4B-human ENCAB000BQH DNA False 2016-04-01 ENCODE 2 ENCFF330ZVF, ENCFF332SVJ 455730252 ENCODE Processing Pipeline a54f3449e959612b84f8b45abe0c89ab https://www.encodeproject.org/files/ENCFF583AKO/@@download/ENCFF583AKO.bigWig GRCh38 released borderline replicate concordance, low read depth, antibody characterized with exemption ENCFF677CNQ bigWig fold change over control ENCSR642VZY ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM4B-human ENCAB000BQH DNA False 2016-04-01 ENCODE 1 ENCFF066TDG, ENCFF162ZOO 431245804 ENCODE Processing Pipeline 72af46ae5790ba55e8640907b1d20b80 https://www.encodeproject.org/files/ENCFF677CNQ/@@download/ENCFF677CNQ.bigWig GRCh38 released borderline replicate concordance, low read depth, antibody characterized with exemption ENCFF112GHP bigWig fold change over control ENCSR642VZY ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM4B-human ENCAB000BQH DNA False 2016-04-01 ENCODE 1, 2 ENCFF066TDG, ENCFF162ZOO, ENCFF330ZVF, ENCFF332SVJ 1075611514 ENCODE Processing Pipeline 2422ec5da6b74c46c6125a10b9d77ea5 https://www.encodeproject.org/files/ENCFF112GHP/@@download/ENCFF112GHP.bigWig GRCh38 released borderline replicate concordance, low read depth, antibody characterized with exemption ENCFF318ICI bed narrowPeak peaks ENCSR642VZY ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM4B-human ENCAB000BQH DNA False 2016-04-01 ENCODE 1 ENCFF066TDG, ENCFF162ZOO 6594649 ENCODE Processing Pipeline c31f11d8abe3e70259e45c68f8f21361 https://www.encodeproject.org/files/ENCFF318ICI/@@download/ENCFF318ICI.bed.gz GRCh38 released borderline replicate concordance, low read depth, antibody characterized with exemption ENCFF665RFE bed narrowPeak peaks ENCSR642VZY ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM4B-human ENCAB000BQH DNA False 2016-04-01 ENCODE 1, 2 ENCFF066TDG, ENCFF162ZOO, ENCFF330ZVF, ENCFF332SVJ 7084471 ENCODE Processing Pipeline a3878e2c9d342dd3cc2f8a67d233cf93 https://www.encodeproject.org/files/ENCFF665RFE/@@download/ENCFF665RFE.bed.gz GRCh38 released borderline replicate concordance, low read depth, antibody characterized with exemption ENCFF354MAW bigBed narrowPeak peaks ENCSR642VZY ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM4B-human ENCAB000BQH DNA False 2016-04-01 ENCODE 2 ENCFF179HIK 10962525 ENCODE Processing Pipeline 8ca18e49a4d7da8036bb4bbe565be454 https://www.encodeproject.org/files/ENCFF354MAW/@@download/ENCFF354MAW.bigBed GRCh38 released borderline replicate concordance, low read depth, antibody characterized with exemption ENCFF179HIK bed narrowPeak peaks ENCSR642VZY ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM4B-human ENCAB000BQH DNA False 2016-04-01 ENCODE 2 ENCFF330ZVF, ENCFF332SVJ 5008917 ENCODE Processing Pipeline cf4d1f9904f6c62a0df213b1061f951b https://www.encodeproject.org/files/ENCFF179HIK/@@download/ENCFF179HIK.bed.gz GRCh38 released borderline replicate concordance, low read depth, antibody characterized with exemption ENCFF570AOS bigBed narrowPeak peaks ENCSR642VZY ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM4B-human ENCAB000BQH DNA False 2016-04-01 ENCODE 1 ENCFF318ICI 12752068 ENCODE Processing Pipeline e36f3e58c3ae6787bf4db2fb74e98c56 https://www.encodeproject.org/files/ENCFF570AOS/@@download/ENCFF570AOS.bigBed GRCh38 released borderline replicate concordance, low read depth, antibody characterized with exemption ENCFF561ZCZ bed narrowPeak conservative idr thresholded peaks ENCSR642VZY ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM4B-human ENCAB000BQH DNA False 2016-04-01 ENCODE 1, 2 ENCFF179HIK, ENCFF318ICI, ENCFF419RSJ, ENCFF665RFE 103633 ENCODE Processing Pipeline 132d8cec16663937ab3d080451cd2263 https://www.encodeproject.org/files/ENCFF561ZCZ/@@download/ENCFF561ZCZ.bed.gz GRCh38 released borderline replicate concordance, low read depth, antibody characterized with exemption ENCFF777YNZ bigBed narrowPeak optimal idr thresholded peaks ENCSR642VZY ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM4B-human ENCAB000BQH DNA False 2016-04-01 ENCODE 1, 2 ENCFF955AOD 376735 ENCODE Processing Pipeline 1b96603803367a75f2d032c7a4e63602 https://www.encodeproject.org/files/ENCFF777YNZ/@@download/ENCFF777YNZ.bigBed GRCh38 released borderline replicate concordance, low read depth, antibody characterized with exemption ENCFF147TRJ bigBed narrowPeak peaks ENCSR642VZY ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM4B-human ENCAB000BQH DNA False 2016-04-01 ENCODE 1, 2 ENCFF665RFE 12998625 ENCODE Processing Pipeline 7cd0d3a8183c62d44b2509670b5a254c https://www.encodeproject.org/files/ENCFF147TRJ/@@download/ENCFF147TRJ.bigBed GRCh38 released borderline replicate concordance, low read depth, antibody characterized with exemption ENCFF738ZFZ bigBed narrowPeak conservative idr thresholded peaks ENCSR642VZY ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM4B-human ENCAB000BQH DNA False 2016-04-01 ENCODE 1, 2 ENCFF561ZCZ 247269 ENCODE Processing Pipeline f4711b6b166ae2952021125cb64edd48 https://www.encodeproject.org/files/ENCFF738ZFZ/@@download/ENCFF738ZFZ.bigBed GRCh38 released borderline replicate concordance, low read depth, antibody characterized with exemption ENCFF955AOD bed narrowPeak optimal idr thresholded peaks ENCSR642VZY ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM4B-human ENCAB000BQH DNA False 2016-04-01 ENCODE 1, 2 ENCFF179HIK, ENCFF318ICI, ENCFF419RSJ, ENCFF665RFE 149529 ENCODE Processing Pipeline bc4c11d9d78b94563fe383ad4e73cabf https://www.encodeproject.org/files/ENCFF955AOD/@@download/ENCFF955AOD.bed.gz GRCh38 released borderline replicate concordance, low read depth, antibody characterized with exemption ENCFF238MPM bam unfiltered alignments ENCSR642VZY ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM4B-human ENCAB000BQH DNA False 2016-04-01 ENCODE 2 50 ENCFF632EVH, ENCFF807MUK 1246686704 ENCODE Processing Pipeline 526ba1e6ff7f204a5c61341d2319d46a https://www.encodeproject.org/files/ENCFF238MPM/@@download/ENCFF238MPM.bam hg19 released borderline replicate concordance, low read depth, antibody characterized with exemption ENCFF215WEE bam unfiltered alignments ENCSR642VZY ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM4B-human ENCAB000BQH DNA False 2016-04-01 ENCODE 1 50 ENCFF778YOV, ENCFF807MUK 1303179867 ENCODE Processing Pipeline 5cb8e72fd969441f4d7d23a52aba7ae1 https://www.encodeproject.org/files/ENCFF215WEE/@@download/ENCFF215WEE.bam hg19 released borderline replicate concordance, low read depth, antibody characterized with exemption ENCFF653KSG bed narrowPeak peaks ENCSR642VZY ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM4B-human ENCAB000BQH DNA False 2016-04-01 ENCODE 2 ENCFF061QOJ, ENCFF697MUV 5013280 ENCODE Processing Pipeline 3b05dbf77ef7c94afb2756e092c442af https://www.encodeproject.org/files/ENCFF653KSG/@@download/ENCFF653KSG.bed.gz hg19 released borderline replicate concordance, low read depth, antibody characterized with exemption ENCFF775QZE bigWig signal p-value ENCSR642VZY ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM4B-human ENCAB000BQH DNA False 2016-04-01 ENCODE 1, 2 ENCFF061QOJ, ENCFF444TNY, ENCFF687NJZ, ENCFF697MUV 1224118762 ENCODE Processing Pipeline e5dcac166c67e602b664e45261925353 https://www.encodeproject.org/files/ENCFF775QZE/@@download/ENCFF775QZE.bigWig hg19 released borderline replicate concordance, low read depth, antibody characterized with exemption ENCFF609EAA bigWig fold change over control ENCSR642VZY ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM4B-human ENCAB000BQH DNA False 2016-04-01 ENCODE 1, 2 ENCFF061QOJ, ENCFF444TNY, ENCFF687NJZ, ENCFF697MUV 1076212579 ENCODE Processing Pipeline f18c53708b5125935ccedc3afc43ac07 https://www.encodeproject.org/files/ENCFF609EAA/@@download/ENCFF609EAA.bigWig hg19 released borderline replicate concordance, low read depth, antibody characterized with exemption ENCFF274QRN bed narrowPeak peaks ENCSR642VZY ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM4B-human ENCAB000BQH DNA False 2016-04-01 ENCODE 1 ENCFF444TNY, ENCFF687NJZ 6619368 ENCODE Processing Pipeline 9623122622e543751f25f98e9569871c https://www.encodeproject.org/files/ENCFF274QRN/@@download/ENCFF274QRN.bed.gz hg19 released borderline replicate concordance, low read depth, antibody characterized with exemption ENCFF321EBZ bed narrowPeak peaks ENCSR642VZY ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM4B-human ENCAB000BQH DNA False 2016-04-01 ENCODE 1, 2 ENCFF061QOJ, ENCFF444TNY, ENCFF687NJZ, ENCFF697MUV 7082793 ENCODE Processing Pipeline 38d601c00b062ea1c82507bfe9a3f98c https://www.encodeproject.org/files/ENCFF321EBZ/@@download/ENCFF321EBZ.bed.gz hg19 released borderline replicate concordance, low read depth, antibody characterized with exemption ENCFF032IBR bigBed narrowPeak optimal idr thresholded peaks ENCSR642VZY ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM4B-human ENCAB000BQH DNA False 2016-04-01 ENCODE 1, 2 ENCFF042RAK 303062 ENCODE Processing Pipeline e3214511453d23770fef16740f036035 https://www.encodeproject.org/files/ENCFF032IBR/@@download/ENCFF032IBR.bigBed hg19 released borderline replicate concordance, low read depth, antibody characterized with exemption ENCFF490JLD bigBed narrowPeak peaks ENCSR642VZY ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM4B-human ENCAB000BQH DNA False 2016-04-01 ENCODE 1 ENCFF274QRN 12737023 ENCODE Processing Pipeline 1243fa2a79f8b3739d1eeea91c53a65d https://www.encodeproject.org/files/ENCFF490JLD/@@download/ENCFF490JLD.bigBed hg19 released borderline replicate concordance, low read depth, antibody characterized with exemption ENCFF261OKK bigBed narrowPeak peaks ENCSR642VZY ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM4B-human ENCAB000BQH DNA False 2016-04-01 ENCODE 2 ENCFF653KSG 10958812 ENCODE Processing Pipeline 988f88a5427ba8c782a715c90950e1e3 https://www.encodeproject.org/files/ENCFF261OKK/@@download/ENCFF261OKK.bigBed hg19 released borderline replicate concordance, low read depth, antibody characterized with exemption ENCFF057VLW bigBed narrowPeak peaks ENCSR642VZY ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM4B-human ENCAB000BQH DNA False 2016-04-01 ENCODE 1, 2 ENCFF321EBZ 12957225 ENCODE Processing Pipeline 9c8b03341dad62af3c3e0678e59fc5df https://www.encodeproject.org/files/ENCFF057VLW/@@download/ENCFF057VLW.bigBed hg19 released borderline replicate concordance, low read depth, antibody characterized with exemption ENCFF402WGE bigBed narrowPeak conservative idr thresholded peaks ENCSR642VZY ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM4B-human ENCAB000BQH DNA False 2016-04-01 ENCODE 1, 2 ENCFF053ADC 239826 ENCODE Processing Pipeline 640b3b3284681584dfac0556c2cbca37 https://www.encodeproject.org/files/ENCFF402WGE/@@download/ENCFF402WGE.bigBed hg19 released borderline replicate concordance, low read depth, antibody characterized with exemption ENCFF042RAK bed narrowPeak optimal idr thresholded peaks ENCSR642VZY ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM4B-human ENCAB000BQH DNA False 2016-04-01 ENCODE 1, 2 ENCFF001TDO, ENCFF274QRN, ENCFF321EBZ, ENCFF653KSG 143406 ENCODE Processing Pipeline 5999caca5c955d8fcf5642d2be510f69 https://www.encodeproject.org/files/ENCFF042RAK/@@download/ENCFF042RAK.bed.gz hg19 released borderline replicate concordance, low read depth, antibody characterized with exemption ENCFF053ADC bed narrowPeak conservative idr thresholded peaks ENCSR642VZY ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM4B-human ENCAB000BQH DNA False 2016-04-01 ENCODE 1, 2 ENCFF001TDO, ENCFF274QRN, ENCFF321EBZ, ENCFF653KSG 99607 ENCODE Processing Pipeline 9679702e2cbe451a0251b3e344a98c49 https://www.encodeproject.org/files/ENCFF053ADC/@@download/ENCFF053ADC.bed.gz hg19 released borderline replicate concordance, low read depth, antibody characterized with exemption ENCFF883QAC bam unfiltered alignments ENCSR970NKQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2F1-human ENCAB000ATZ DNA False 2016-06-14 ENCODE 1 100 ENCFF394OKZ, ENCFF579DKO, ENCFF807MUK 4152570025 ENCODE Processing Pipeline 579c9ecfd9e34d88a86814583a5c8f7b https://www.encodeproject.org/files/ENCFF883QAC/@@download/ENCFF883QAC.bam hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF188CZN bam unfiltered alignments ENCSR970NKQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2F1-human ENCAB000ATZ DNA False 2016-06-14 ENCODE 2 100 ENCFF691DSF, ENCFF807MUK, ENCFF810SJL 4029213424 ENCODE Processing Pipeline cbed1df7c035b99ec4d7806c09d6e95c https://www.encodeproject.org/files/ENCFF188CZN/@@download/ENCFF188CZN.bam hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF394OKZ fastq reads ENCSR970NKQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2F1-human ENCAB000ATZ DNA False 2016-06-14 ENCODE 1 1 100 paired-ended 1 ENCFF579DKO 1966090308 Michael Snyder, Stanford 9f9fd0e849f4b54144d163ad2f34d3a6 SRA:SRR5112339 https://www.encodeproject.org/files/ENCFF394OKZ/@@download/ENCFF394OKZ.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFF/ released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF810SJL fastq reads ENCSR970NKQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2F1-human ENCAB000ATZ DNA False 2016-06-14 ENCODE 2 1 100 paired-ended 2 ENCFF691DSF 1954869550 Michael Snyder, Stanford 7e0610f1e0931e02fe08488939687a39 SRA:SRR5112338 https://www.encodeproject.org/files/ENCFF810SJL/@@download/ENCFF810SJL.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFA/ released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF579DKO fastq reads ENCSR970NKQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2F1-human ENCAB000ATZ DNA False 2016-06-14 ENCODE 1 1 100 paired-ended 2 ENCFF394OKZ 2001522286 Michael Snyder, Stanford dc08f6cd711b1174bf843d4735e761ed SRA:SRR5112339 https://www.encodeproject.org/files/ENCFF579DKO/@@download/ENCFF579DKO.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFH/ released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF691DSF fastq reads ENCSR970NKQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2F1-human ENCAB000ATZ DNA False 2016-06-14 ENCODE 2 1 100 paired-ended 1 ENCFF810SJL 1896421683 Michael Snyder, Stanford 9ae3a64ce69415b1b3171f52df17a6d1 SRA:SRR5112338 https://www.encodeproject.org/files/ENCFF691DSF/@@download/ENCFF691DSF.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFD/ released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF056YEU bam alignments ENCSR970NKQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2F1-human ENCAB000ATZ DNA False 2016-06-14 ENCODE 1 100 ENCFF394OKZ, ENCFF579DKO, ENCFF807MUK 3069930850 ENCODE Processing Pipeline 658fbc654bf48964a185aee78ac59d83 https://www.encodeproject.org/files/ENCFF056YEU/@@download/ENCFF056YEU.bam hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF688SSK bam alignments ENCSR970NKQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2F1-human ENCAB000ATZ DNA False 2016-06-14 ENCODE 2 100 ENCFF691DSF, ENCFF807MUK, ENCFF810SJL 3064998527 ENCODE Processing Pipeline 8059b4367fdf2bf3e8603b71bf939228 https://www.encodeproject.org/files/ENCFF688SSK/@@download/ENCFF688SSK.bam hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF507FJP bigWig signal p-value ENCSR970NKQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2F1-human ENCAB000ATZ DNA False 2016-06-14 ENCODE 1 ENCFF056YEU, ENCFF581ZJL 931075036 ENCODE Processing Pipeline f922c10a77abad8118ffcd1f4d74b35a https://www.encodeproject.org/files/ENCFF507FJP/@@download/ENCFF507FJP.bigWig hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF228AQW bigWig signal p-value ENCSR970NKQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2F1-human ENCAB000ATZ DNA False 2016-06-14 ENCODE 2 ENCFF051LWI, ENCFF688SSK 1037211327 ENCODE Processing Pipeline fca4597e782637222d5e7f8ca3aba7d9 https://www.encodeproject.org/files/ENCFF228AQW/@@download/ENCFF228AQW.bigWig hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF321HLT bigWig signal p-value ENCSR970NKQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2F1-human ENCAB000ATZ DNA False 2016-06-14 ENCODE 1, 2 ENCFF051LWI, ENCFF056YEU, ENCFF581ZJL, ENCFF688SSK 1850720333 ENCODE Processing Pipeline 6d9e191ebb46e22d9dceb64a0a642809 https://www.encodeproject.org/files/ENCFF321HLT/@@download/ENCFF321HLT.bigWig hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF727EDE bigWig fold change over control ENCSR970NKQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2F1-human ENCAB000ATZ DNA False 2016-06-14 ENCODE 1 ENCFF056YEU, ENCFF581ZJL 1002537955 ENCODE Processing Pipeline a931e1f123ab29c6e27d10307204b7ca https://www.encodeproject.org/files/ENCFF727EDE/@@download/ENCFF727EDE.bigWig hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF191MMQ bigWig fold change over control ENCSR970NKQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2F1-human ENCAB000ATZ DNA False 2016-06-14 ENCODE 2 ENCFF051LWI, ENCFF688SSK 976091880 ENCODE Processing Pipeline 8f524f1a881196e307ed706994e7379e https://www.encodeproject.org/files/ENCFF191MMQ/@@download/ENCFF191MMQ.bigWig hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF928QBF bigWig fold change over control ENCSR970NKQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2F1-human ENCAB000ATZ DNA False 2016-06-14 ENCODE 1, 2 ENCFF051LWI, ENCFF056YEU, ENCFF581ZJL, ENCFF688SSK 1867542027 ENCODE Processing Pipeline 2d85765e6d02d0c1797286e024a68dea https://www.encodeproject.org/files/ENCFF928QBF/@@download/ENCFF928QBF.bigWig hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF224GWU bed narrowPeak peaks ENCSR970NKQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2F1-human ENCAB000ATZ DNA False 2016-06-14 ENCODE 1 ENCFF056YEU, ENCFF581ZJL 6885777 ENCODE Processing Pipeline 70192d3307157e7e26c82dba98d77c9d https://www.encodeproject.org/files/ENCFF224GWU/@@download/ENCFF224GWU.bed.gz hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF035WWJ bed narrowPeak peaks ENCSR970NKQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2F1-human ENCAB000ATZ DNA False 2016-06-14 ENCODE 2 ENCFF051LWI, ENCFF688SSK 6996638 ENCODE Processing Pipeline 1e16fc976551c3b160a13c72af02467e https://www.encodeproject.org/files/ENCFF035WWJ/@@download/ENCFF035WWJ.bed.gz hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF359OAZ bed narrowPeak peaks ENCSR970NKQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2F1-human ENCAB000ATZ DNA False 2016-06-14 ENCODE 1, 2 ENCFF051LWI, ENCFF056YEU, ENCFF581ZJL, ENCFF688SSK 7160460 ENCODE Processing Pipeline 505401679b58f689a58f4932a8bc76d7 https://www.encodeproject.org/files/ENCFF359OAZ/@@download/ENCFF359OAZ.bed.gz hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF019LTW bigBed narrowPeak peaks ENCSR970NKQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2F1-human ENCAB000ATZ DNA False 2016-06-14 ENCODE 1 ENCFF224GWU 13120127 ENCODE Processing Pipeline 666a4d0a38981d6a8b0c821632fbd6ba https://www.encodeproject.org/files/ENCFF019LTW/@@download/ENCFF019LTW.bigBed hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF643YKS bigBed narrowPeak peaks ENCSR970NKQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2F1-human ENCAB000ATZ DNA False 2016-06-14 ENCODE 2 ENCFF035WWJ 13043160 ENCODE Processing Pipeline 5bfbad0fb06b969770acc1f1062d1c11 https://www.encodeproject.org/files/ENCFF643YKS/@@download/ENCFF643YKS.bigBed hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF232TTD bigBed narrowPeak peaks ENCSR970NKQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2F1-human ENCAB000ATZ DNA False 2016-06-14 ENCODE 1, 2 ENCFF359OAZ 12902896 ENCODE Processing Pipeline 52a12b1ea0e762d3c2d3ba1c77af2b2d https://www.encodeproject.org/files/ENCFF232TTD/@@download/ENCFF232TTD.bigBed hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF010LCS bam unfiltered alignments ENCSR970NKQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2F1-human ENCAB000ATZ DNA False 2016-06-14 ENCODE 2 100 ENCFF643CGH, ENCFF691DSF, ENCFF810SJL 4031072255 ENCODE Processing Pipeline 7f62a231069738af16f076b2a87b7fa7 https://www.encodeproject.org/files/ENCFF010LCS/@@download/ENCFF010LCS.bam GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF565IHI bam unfiltered alignments ENCSR970NKQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2F1-human ENCAB000ATZ DNA False 2016-06-14 ENCODE 1 100 ENCFF394OKZ, ENCFF579DKO, ENCFF643CGH 4154709921 ENCODE Processing Pipeline 40364af286f6de0ad20e3f0241c72ce4 https://www.encodeproject.org/files/ENCFF565IHI/@@download/ENCFF565IHI.bam GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF550IUC bam alignments ENCSR970NKQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2F1-human ENCAB000ATZ DNA False 2016-06-14 ENCODE 2 100 ENCFF643CGH, ENCFF691DSF, ENCFF810SJL 3065987892 ENCODE Processing Pipeline 4a2fdf561a9bc85ef728f2dc420b0e9d https://www.encodeproject.org/files/ENCFF550IUC/@@download/ENCFF550IUC.bam GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF284XYU bam alignments ENCSR970NKQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2F1-human ENCAB000ATZ DNA False 2016-06-14 ENCODE 1 100 ENCFF394OKZ, ENCFF579DKO, ENCFF643CGH 3070668564 ENCODE Processing Pipeline 6a585d29acf92f480d014e239ff1cc26 https://www.encodeproject.org/files/ENCFF284XYU/@@download/ENCFF284XYU.bam GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF560KJD bigWig signal p-value ENCSR970NKQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2F1-human ENCAB000ATZ DNA False 2016-06-14 ENCODE 1 ENCFF284XYU, ENCFF910IKB 1096280528 ENCODE Processing Pipeline 15bb5d4a0a3c21bde45fd448f607ac17 https://www.encodeproject.org/files/ENCFF560KJD/@@download/ENCFF560KJD.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF770VPZ bigWig signal p-value ENCSR970NKQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2F1-human ENCAB000ATZ DNA False 2016-06-14 ENCODE 2 ENCFF227IZS, ENCFF550IUC 1067413542 ENCODE Processing Pipeline 4718cd455634c11ba7c9531eac52f7af https://www.encodeproject.org/files/ENCFF770VPZ/@@download/ENCFF770VPZ.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF651CVV bigWig signal p-value ENCSR970NKQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2F1-human ENCAB000ATZ DNA False 2016-06-14 ENCODE 1, 2 ENCFF227IZS, ENCFF284XYU, ENCFF550IUC, ENCFF910IKB 1680009065 ENCODE Processing Pipeline 24aebe4a09f326e94c3bcc34737933a7 https://www.encodeproject.org/files/ENCFF651CVV/@@download/ENCFF651CVV.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF574EBO bigWig fold change over control ENCSR970NKQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2F1-human ENCAB000ATZ DNA False 2016-06-14 ENCODE 1 ENCFF284XYU, ENCFF910IKB 997976918 ENCODE Processing Pipeline e5d88c8623d11a1e6d6844077ff93ff4 https://www.encodeproject.org/files/ENCFF574EBO/@@download/ENCFF574EBO.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF450MKP bigWig fold change over control ENCSR970NKQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2F1-human ENCAB000ATZ DNA False 2016-06-14 ENCODE 2 ENCFF227IZS, ENCFF550IUC 961107474 ENCODE Processing Pipeline b373b2f99cff6dc0bd1e7b5969808ebe https://www.encodeproject.org/files/ENCFF450MKP/@@download/ENCFF450MKP.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF814GLP bigWig fold change over control ENCSR970NKQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2F1-human ENCAB000ATZ DNA False 2016-06-14 ENCODE 1, 2 ENCFF227IZS, ENCFF284XYU, ENCFF550IUC, ENCFF910IKB 1870275533 ENCODE Processing Pipeline 620edde6e331bd512615d5eba823ba93 https://www.encodeproject.org/files/ENCFF814GLP/@@download/ENCFF814GLP.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF615BZR bed narrowPeak peaks ENCSR970NKQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2F1-human ENCAB000ATZ DNA False 2016-06-14 ENCODE 1 ENCFF284XYU, ENCFF910IKB 6784009 ENCODE Processing Pipeline 86a7cd8db98332b152e44a13e13c4e71 https://www.encodeproject.org/files/ENCFF615BZR/@@download/ENCFF615BZR.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF754BES bed narrowPeak peaks ENCSR970NKQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2F1-human ENCAB000ATZ DNA False 2016-06-14 ENCODE 2 ENCFF227IZS, ENCFF550IUC 6949241 ENCODE Processing Pipeline b1b415c9b9f964d4b2cf246830bd50c9 https://www.encodeproject.org/files/ENCFF754BES/@@download/ENCFF754BES.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF888YHJ bed narrowPeak peaks ENCSR970NKQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2F1-human ENCAB000ATZ DNA False 2016-06-14 ENCODE 1, 2 ENCFF227IZS, ENCFF284XYU, ENCFF550IUC, ENCFF910IKB 7123575 ENCODE Processing Pipeline 9a0df81b4f7740c73a603f2ade5e029e https://www.encodeproject.org/files/ENCFF888YHJ/@@download/ENCFF888YHJ.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF048KVM bigBed narrowPeak peaks ENCSR970NKQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2F1-human ENCAB000ATZ DNA False 2016-06-14 ENCODE 1 ENCFF615BZR 13103618 ENCODE Processing Pipeline 4dce0b1269088646f0e4443ea04cd840 https://www.encodeproject.org/files/ENCFF048KVM/@@download/ENCFF048KVM.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF524TVP bigBed narrowPeak peaks ENCSR970NKQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2F1-human ENCAB000ATZ DNA False 2016-06-14 ENCODE 2 ENCFF754BES 13055512 ENCODE Processing Pipeline 05fd9e83dcf5d620033d97e6a8e8e32d https://www.encodeproject.org/files/ENCFF524TVP/@@download/ENCFF524TVP.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF497MMS bigBed narrowPeak peaks ENCSR970NKQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2F1-human ENCAB000ATZ DNA False 2016-06-14 ENCODE 1, 2 ENCFF888YHJ 12880245 ENCODE Processing Pipeline 5ff76aa469eba45fbf864374030f28de https://www.encodeproject.org/files/ENCFF497MMS/@@download/ENCFF497MMS.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF067JKB bed narrowPeak conservative idr thresholded peaks ENCSR970NKQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2F1-human ENCAB000ATZ DNA False 2016-06-14 ENCODE 1, 2 ENCFF419RSJ, ENCFF615BZR, ENCFF754BES, ENCFF888YHJ 590349 ENCODE Processing Pipeline 7df767d8ffe21784582fddfb3063c3e5 https://www.encodeproject.org/files/ENCFF067JKB/@@download/ENCFF067JKB.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF947LCV bigBed narrowPeak conservative idr thresholded peaks ENCSR970NKQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2F1-human ENCAB000ATZ DNA False 2016-06-14 ENCODE 1, 2 ENCFF067JKB 1148196 ENCODE Processing Pipeline 1cd402dfc723c5f2d4b073c7403f47cc https://www.encodeproject.org/files/ENCFF947LCV/@@download/ENCFF947LCV.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF363IQN bed narrowPeak optimal idr thresholded peaks ENCSR970NKQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2F1-human ENCAB000ATZ DNA False 2016-06-14 ENCODE 1, 2 ENCFF419RSJ, ENCFF615BZR, ENCFF754BES, ENCFF888YHJ 681758 ENCODE Processing Pipeline 604cdb65e93975323200d473f7490995 https://www.encodeproject.org/files/ENCFF363IQN/@@download/ENCFF363IQN.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF043FLB bigBed narrowPeak optimal idr thresholded peaks ENCSR970NKQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2F1-human ENCAB000ATZ DNA False 2016-06-14 ENCODE 1, 2 ENCFF363IQN 1284565 ENCODE Processing Pipeline 04404890e874fb50559141f85392d8a3 https://www.encodeproject.org/files/ENCFF043FLB/@@download/ENCFF043FLB.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF296LKS bigBed narrowPeak optimal idr thresholded peaks ENCSR970NKQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2F1-human ENCAB000ATZ DNA False 2016-06-14 ENCODE 1, 2 ENCFF175IIE 1176199 ENCODE Processing Pipeline 4ee399ef901821c71a65092fbd917a76 https://www.encodeproject.org/files/ENCFF296LKS/@@download/ENCFF296LKS.bigBed hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF175IIE bed narrowPeak optimal idr thresholded peaks ENCSR970NKQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2F1-human ENCAB000ATZ DNA False 2016-06-14 ENCODE 1, 2 ENCFF001TDO, ENCFF035WWJ, ENCFF224GWU, ENCFF359OAZ 603194 ENCODE Processing Pipeline adbe9db9e3821e3e5d266adc496d2cf0 https://www.encodeproject.org/files/ENCFF175IIE/@@download/ENCFF175IIE.bed.gz hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF078SJN bed narrowPeak conservative idr thresholded peaks ENCSR970NKQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2F1-human ENCAB000ATZ DNA False 2016-06-14 ENCODE 1, 2 ENCFF001TDO, ENCFF035WWJ, ENCFF224GWU, ENCFF359OAZ 515602 ENCODE Processing Pipeline 76344cdee4dc5d4227dad8bf9b6c9287 https://www.encodeproject.org/files/ENCFF078SJN/@@download/ENCFF078SJN.bed.gz hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF418RBD bigBed narrowPeak conservative idr thresholded peaks ENCSR970NKQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2F1-human ENCAB000ATZ DNA False 2016-06-14 ENCODE 1, 2 ENCFF078SJN 1051662 ENCODE Processing Pipeline 9058f5c8423aa38e6ce2d341b32e71f2 https://www.encodeproject.org/files/ENCFF418RBD/@@download/ENCFF418RBD.bigBed hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF244MUT bam unfiltered alignments ENCSR462QZZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF395-human ENCAB728YTO DNA False 2017-12-04 ENCODE 3 50 ENCFF116EZS, ENCFF133ABX, ENCFF807MUK 1250878584 ENCODE Processing Pipeline 69f8e4a1ed31c0d9809dcae45f290af2 https://www.encodeproject.org/files/ENCFF244MUT/@@download/ENCFF244MUT.bam hg19 released control low read depth, missing genetic modification characterization experiment not submitted to GEO ENCFF964IQS bam unfiltered alignments ENCSR462QZZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF395-human ENCAB728YTO DNA False 2017-12-04 ENCODE 1 50 ENCFF134EOW, ENCFF479NRX, ENCFF807MUK 1963301245 ENCODE Processing Pipeline 75aafb0a65f1bc244ba7369eeb21c1b9 https://www.encodeproject.org/files/ENCFF964IQS/@@download/ENCFF964IQS.bam hg19 released control low read depth, missing genetic modification characterization experiment not submitted to GEO ENCFF133ABX fastq reads ENCSR462QZZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF395-human ENCAB728YTO DNA False 2017-12-04 ENCODE 3 1 50 single-ended 580046808 Kevin White, UChicago 39368de65b8f188fa201a5a07f7e2eaa https://www.encodeproject.org/files/ENCFF133ABX/@@download/ENCFF133ABX.fastq.gz Illumina HiSeq 2500 /files/ENCFF563LVJ/, /files/ENCFF877XOV/ released control low read depth, missing genetic modification characterization experiment not submitted to GEO ENCFF134EOW fastq reads ENCSR462QZZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF395-human ENCAB728YTO DNA False 2017-12-04 ENCODE 1 1 50 single-ended 667205688 Kevin White, UChicago 590d6219e63afa62f482adc269090967 https://www.encodeproject.org/files/ENCFF134EOW/@@download/ENCFF134EOW.fastq.gz Illumina HiSeq 2500 /files/ENCFF563LVJ/, /files/ENCFF877XOV/ released control low read depth, missing genetic modification characterization experiment not submitted to GEO ENCFF116EZS fastq reads ENCSR462QZZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF395-human ENCAB728YTO DNA False 2017-12-04 ENCODE 3 1 50 single-ended 608488724 Kevin White, UChicago 8f82bcfc41eaf421ca3dbb09e8333fce https://www.encodeproject.org/files/ENCFF116EZS/@@download/ENCFF116EZS.fastq.gz Illumina HiSeq 2500 /files/ENCFF563LVJ/, /files/ENCFF877XOV/ released control low read depth, missing genetic modification characterization experiment not submitted to GEO ENCFF479NRX fastq reads ENCSR462QZZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF395-human ENCAB728YTO DNA False 2017-12-04 ENCODE 1 1 50 single-ended 1161404882 Kevin White, UChicago 3a9e98fe8652c0989132ee0dbe0357c1 https://www.encodeproject.org/files/ENCFF479NRX/@@download/ENCFF479NRX.fastq.gz Illumina HiSeq 2500 /files/ENCFF563LVJ/, /files/ENCFF877XOV/ released control low read depth, missing genetic modification characterization experiment not submitted to GEO ENCFF947NGO bam alignments ENCSR462QZZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF395-human ENCAB728YTO DNA False 2017-12-04 ENCODE 3 ENCFF116EZS, ENCFF133ABX, ENCFF807MUK 917391405 ENCODE Processing Pipeline c9cfaf2f18ec1131e693969cd4156cb3 https://www.encodeproject.org/files/ENCFF947NGO/@@download/ENCFF947NGO.bam hg19 released control low read depth, missing genetic modification characterization experiment not submitted to GEO ENCFF254TEL bam alignments ENCSR462QZZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF395-human ENCAB728YTO DNA False 2017-12-04 ENCODE 1 ENCFF134EOW, ENCFF479NRX, ENCFF807MUK 1492832226 ENCODE Processing Pipeline ee1aaf308b4de52247ca09d8787ab56c https://www.encodeproject.org/files/ENCFF254TEL/@@download/ENCFF254TEL.bam hg19 released control low read depth, missing genetic modification characterization experiment not submitted to GEO ENCFF537JSG bam alignments ENCSR462QZZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF395-human ENCAB728YTO DNA False 2017-12-04 ENCODE 3 50 ENCFF116EZS, ENCFF133ABX, ENCFF643CGH 916866593 ENCODE Processing Pipeline 0767dfc45886c1dd91842d0d1a4b1e93 https://www.encodeproject.org/files/ENCFF537JSG/@@download/ENCFF537JSG.bam GRCh38 released control low read depth, missing genetic modification characterization experiment not submitted to GEO ENCFF005WQC bam alignments ENCSR462QZZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF395-human ENCAB728YTO DNA False 2017-12-04 ENCODE 1 50 ENCFF134EOW, ENCFF479NRX, ENCFF643CGH 1492126111 ENCODE Processing Pipeline f6dd27428b7eac3074afb4b00902794e https://www.encodeproject.org/files/ENCFF005WQC/@@download/ENCFF005WQC.bam GRCh38 released control low read depth, missing genetic modification characterization experiment not submitted to GEO ENCFF744DDO bam unfiltered alignments ENCSR462QZZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF395-human ENCAB728YTO DNA False 2017-12-04 ENCODE 3 50 ENCFF116EZS, ENCFF133ABX, ENCFF643CGH 1254334554 ENCODE Processing Pipeline 1c4f230abd6acb0110599d58ef09d568 https://www.encodeproject.org/files/ENCFF744DDO/@@download/ENCFF744DDO.bam GRCh38 released control low read depth, missing genetic modification characterization experiment not submitted to GEO ENCFF007UFZ bam unfiltered alignments ENCSR462QZZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF395-human ENCAB728YTO DNA False 2017-12-04 ENCODE 1 50 ENCFF134EOW, ENCFF479NRX, ENCFF643CGH 1968919848 ENCODE Processing Pipeline d24632758138436e60e59cf562d5b196 https://www.encodeproject.org/files/ENCFF007UFZ/@@download/ENCFF007UFZ.bam GRCh38 released control low read depth, missing genetic modification characterization experiment not submitted to GEO ENCFF264JPR bigWig signal p-value ENCSR462QZZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF395-human ENCAB728YTO DNA False 2017-12-04 ENCODE 3 ENCFF834IGQ, ENCFF947NGO 434538841 ENCODE Processing Pipeline ce7fca3814d06b739c1c746f02e598bf https://www.encodeproject.org/files/ENCFF264JPR/@@download/ENCFF264JPR.bigWig hg19 released control low read depth, missing genetic modification characterization experiment not submitted to GEO ENCFF828JND bigWig signal p-value ENCSR462QZZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF395-human ENCAB728YTO DNA False 2017-12-04 ENCODE 1 ENCFF254TEL, ENCFF834IGQ 423576911 ENCODE Processing Pipeline 68310f159b103118c38d80bb5bf2f519 https://www.encodeproject.org/files/ENCFF828JND/@@download/ENCFF828JND.bigWig hg19 released control low read depth, missing genetic modification characterization experiment not submitted to GEO ENCFF801APL bed narrowPeak peaks ENCSR462QZZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF395-human ENCAB728YTO DNA False 2017-12-04 ENCODE 1 ENCFF254TEL, ENCFF834IGQ 6631369 ENCODE Processing Pipeline 62a35ad14213b01f4f8e77964222add6 https://www.encodeproject.org/files/ENCFF801APL/@@download/ENCFF801APL.bed.gz hg19 released control low read depth, missing genetic modification characterization experiment not submitted to GEO ENCFF671LDD bed narrowPeak peaks ENCSR462QZZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF395-human ENCAB728YTO DNA False 2017-12-04 ENCODE 3 ENCFF834IGQ, ENCFF947NGO 6548124 ENCODE Processing Pipeline 6ee22c93011130ba8a66ce84ce98bd8c https://www.encodeproject.org/files/ENCFF671LDD/@@download/ENCFF671LDD.bed.gz hg19 released control low read depth, missing genetic modification characterization experiment not submitted to GEO ENCFF301MYO bigWig fold change over control ENCSR462QZZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF395-human ENCAB728YTO DNA False 2017-12-04 ENCODE 3 ENCFF834IGQ, ENCFF947NGO 438479727 ENCODE Processing Pipeline e33e517e97bf2ecb0cb21efa4fdbe08b https://www.encodeproject.org/files/ENCFF301MYO/@@download/ENCFF301MYO.bigWig hg19 released control low read depth, missing genetic modification characterization experiment not submitted to GEO ENCFF922NHB bigWig fold change over control ENCSR462QZZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF395-human ENCAB728YTO DNA False 2017-12-04 ENCODE 1, 3 ENCFF254TEL, ENCFF834IGQ, ENCFF947NGO 815385213 ENCODE Processing Pipeline bc505f3317d9be799e17ca33601cf3fe https://www.encodeproject.org/files/ENCFF922NHB/@@download/ENCFF922NHB.bigWig hg19 released control low read depth, missing genetic modification characterization experiment not submitted to GEO ENCFF052MPU bigBed narrowPeak peaks ENCSR462QZZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF395-human ENCAB728YTO DNA False 2017-12-04 ENCODE 1 ENCFF801APL 12856161 ENCODE Processing Pipeline 5569f4e3d9700947cbeae97e8cb65921 https://www.encodeproject.org/files/ENCFF052MPU/@@download/ENCFF052MPU.bigBed hg19 released control low read depth, missing genetic modification characterization experiment not submitted to GEO ENCFF440NYH bigBed narrowPeak peaks ENCSR462QZZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF395-human ENCAB728YTO DNA False 2017-12-04 ENCODE 3 ENCFF671LDD 12492432 ENCODE Processing Pipeline d7852c5f918116ba398f69ca275c28d7 https://www.encodeproject.org/files/ENCFF440NYH/@@download/ENCFF440NYH.bigBed hg19 released control low read depth, missing genetic modification characterization experiment not submitted to GEO ENCFF708ZJA bigBed narrowPeak optimal idr thresholded peaks ENCSR462QZZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF395-human ENCAB728YTO DNA False 2017-12-04 ENCODE 1, 3 ENCFF388YOB 1147284 ENCODE Processing Pipeline 3e455479f40bc8e2495713dbc787543c https://www.encodeproject.org/files/ENCFF708ZJA/@@download/ENCFF708ZJA.bigBed hg19 released control low read depth, missing genetic modification characterization experiment not submitted to GEO ENCFF632AQL bed narrowPeak conservative idr thresholded peaks ENCSR462QZZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF395-human ENCAB728YTO DNA False 2017-12-04 ENCODE 1, 3 ENCFF001TDO, ENCFF671LDD, ENCFF801APL, ENCFF925XFR 407661 ENCODE Processing Pipeline 8c93ffbca33125ddd2b9195ab394ccb8 https://www.encodeproject.org/files/ENCFF632AQL/@@download/ENCFF632AQL.bed.gz hg19 released control low read depth, missing genetic modification characterization experiment not submitted to GEO ENCFF219XJE bigBed narrowPeak conservative idr thresholded peaks ENCSR462QZZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF395-human ENCAB728YTO DNA False 2017-12-04 ENCODE 1, 3 ENCFF632AQL 1011613 ENCODE Processing Pipeline 90a4bfd73a2c02407af8e91d1f2b0519 https://www.encodeproject.org/files/ENCFF219XJE/@@download/ENCFF219XJE.bigBed hg19 released control low read depth, missing genetic modification characterization experiment not submitted to GEO ENCFF388YOB bed narrowPeak optimal idr thresholded peaks ENCSR462QZZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF395-human ENCAB728YTO DNA False 2017-12-04 ENCODE 1, 3 ENCFF001TDO, ENCFF671LDD, ENCFF801APL, ENCFF925XFR 471909 ENCODE Processing Pipeline fda08e2b7c3812bda36632c9d20dec23 https://www.encodeproject.org/files/ENCFF388YOB/@@download/ENCFF388YOB.bed.gz hg19 released control low read depth, missing genetic modification characterization experiment not submitted to GEO ENCFF372UFI bigWig fold change over control ENCSR462QZZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF395-human ENCAB728YTO DNA False 2017-12-04 ENCODE 1 ENCFF254TEL, ENCFF834IGQ 586768648 ENCODE Processing Pipeline fdc54d8cbfdaa48dc648ba950816d0d3 https://www.encodeproject.org/files/ENCFF372UFI/@@download/ENCFF372UFI.bigWig hg19 released control low read depth, missing genetic modification characterization experiment not submitted to GEO ENCFF398AJM bigWig signal p-value ENCSR462QZZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF395-human ENCAB728YTO DNA False 2017-12-04 ENCODE 1, 3 ENCFF254TEL, ENCFF834IGQ, ENCFF947NGO 396241719 ENCODE Processing Pipeline 15ed1016a2315833b1c68a170a50ff14 https://www.encodeproject.org/files/ENCFF398AJM/@@download/ENCFF398AJM.bigWig hg19 released control low read depth, missing genetic modification characterization experiment not submitted to GEO ENCFF116FCF bigBed narrowPeak peaks ENCSR462QZZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF395-human ENCAB728YTO DNA False 2017-12-04 ENCODE 1, 3 ENCFF925XFR 12630626 ENCODE Processing Pipeline 78d7f6aa648d79186f6e6c12aae9ff55 https://www.encodeproject.org/files/ENCFF116FCF/@@download/ENCFF116FCF.bigBed hg19 released control low read depth, missing genetic modification characterization experiment not submitted to GEO ENCFF925XFR bed narrowPeak peaks ENCSR462QZZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF395-human ENCAB728YTO DNA False 2017-12-04 ENCODE 1, 3 ENCFF254TEL, ENCFF834IGQ, ENCFF947NGO 7107484 ENCODE Processing Pipeline 38d43b46a268223a6125a06091da88f8 https://www.encodeproject.org/files/ENCFF925XFR/@@download/ENCFF925XFR.bed.gz hg19 released control low read depth, missing genetic modification characterization experiment not submitted to GEO ENCFF171QBI bigWig fold change over control ENCSR462QZZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF395-human ENCAB728YTO DNA False 2017-12-04 ENCODE 1, 3 ENCFF005WQC, ENCFF537JSG, ENCFF791OAY 816038099 ENCODE Processing Pipeline 06b991eb880979557b0389cd4a7bf41c https://www.encodeproject.org/files/ENCFF171QBI/@@download/ENCFF171QBI.bigWig GRCh38 released control low read depth, missing genetic modification characterization experiment not submitted to GEO ENCFF409RVV bed narrowPeak peaks ENCSR462QZZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF395-human ENCAB728YTO DNA False 2017-12-04 ENCODE 3 ENCFF537JSG, ENCFF791OAY 6550359 ENCODE Processing Pipeline 43f77d708704cee952201b42d9acace8 https://www.encodeproject.org/files/ENCFF409RVV/@@download/ENCFF409RVV.bed.gz GRCh38 released control low read depth, missing genetic modification characterization experiment not submitted to GEO ENCFF912XJB bigWig fold change over control ENCSR462QZZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF395-human ENCAB728YTO DNA False 2017-12-04 ENCODE 1 ENCFF005WQC, ENCFF791OAY 577140108 ENCODE Processing Pipeline 84694325f34cb84814c9bb4a635d88c3 https://www.encodeproject.org/files/ENCFF912XJB/@@download/ENCFF912XJB.bigWig GRCh38 released control low read depth, missing genetic modification characterization experiment not submitted to GEO ENCFF275HDU bed narrowPeak optimal idr thresholded peaks ENCSR462QZZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF395-human ENCAB728YTO DNA False 2017-12-04 ENCODE 1, 3 ENCFF409RVV, ENCFF419RSJ, ENCFF872BRZ, ENCFF935YHM 475119 ENCODE Processing Pipeline bc20f0ea9a6c05b252663ccb0018073a https://www.encodeproject.org/files/ENCFF275HDU/@@download/ENCFF275HDU.bed.gz GRCh38 released control low read depth, missing genetic modification characterization experiment not submitted to GEO ENCFF530EEK bigBed narrowPeak peaks ENCSR462QZZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF395-human ENCAB728YTO DNA False 2017-12-04 ENCODE 1 ENCFF872BRZ 12859940 ENCODE Processing Pipeline 615860188869e233398987f40cbeafa7 https://www.encodeproject.org/files/ENCFF530EEK/@@download/ENCFF530EEK.bigBed GRCh38 released control low read depth, missing genetic modification characterization experiment not submitted to GEO ENCFF852HSR bigBed narrowPeak peaks ENCSR462QZZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF395-human ENCAB728YTO DNA False 2017-12-04 ENCODE 1, 3 ENCFF935YHM 12654863 ENCODE Processing Pipeline 9e8e19e9a873e4c0730705610a25c07b https://www.encodeproject.org/files/ENCFF852HSR/@@download/ENCFF852HSR.bigBed GRCh38 released control low read depth, missing genetic modification characterization experiment not submitted to GEO ENCFF593FCH bigWig signal p-value ENCSR462QZZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF395-human ENCAB728YTO DNA False 2017-12-04 ENCODE 1 ENCFF005WQC, ENCFF791OAY 421095247 ENCODE Processing Pipeline 5da12173923393205d7f26def23dd06f https://www.encodeproject.org/files/ENCFF593FCH/@@download/ENCFF593FCH.bigWig GRCh38 released control low read depth, missing genetic modification characterization experiment not submitted to GEO ENCFF465BOD bigWig signal p-value ENCSR462QZZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF395-human ENCAB728YTO DNA False 2017-12-04 ENCODE 3 ENCFF537JSG, ENCFF791OAY 434108464 ENCODE Processing Pipeline a85cb1759132a48992396e95db7170ef https://www.encodeproject.org/files/ENCFF465BOD/@@download/ENCFF465BOD.bigWig GRCh38 released control low read depth, missing genetic modification characterization experiment not submitted to GEO ENCFF409AJV bigWig signal p-value ENCSR462QZZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF395-human ENCAB728YTO DNA False 2017-12-04 ENCODE 1, 3 ENCFF005WQC, ENCFF537JSG, ENCFF791OAY 395785624 ENCODE Processing Pipeline 0d3d1ac622af448764dcaa8aa8119622 https://www.encodeproject.org/files/ENCFF409AJV/@@download/ENCFF409AJV.bigWig GRCh38 released control low read depth, missing genetic modification characterization experiment not submitted to GEO ENCFF184SRK bigWig fold change over control ENCSR462QZZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF395-human ENCAB728YTO DNA False 2017-12-04 ENCODE 3 ENCFF537JSG, ENCFF791OAY 439389325 ENCODE Processing Pipeline d64ed727ebee89aece2de8a949ea7c0e https://www.encodeproject.org/files/ENCFF184SRK/@@download/ENCFF184SRK.bigWig GRCh38 released control low read depth, missing genetic modification characterization experiment not submitted to GEO ENCFF872BRZ bed narrowPeak peaks ENCSR462QZZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF395-human ENCAB728YTO DNA False 2017-12-04 ENCODE 1 ENCFF005WQC, ENCFF791OAY 6629096 ENCODE Processing Pipeline 98f29e5284ce2c6c0b180e46b3014ac3 https://www.encodeproject.org/files/ENCFF872BRZ/@@download/ENCFF872BRZ.bed.gz GRCh38 released control low read depth, missing genetic modification characterization experiment not submitted to GEO ENCFF935YHM bed narrowPeak peaks ENCSR462QZZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF395-human ENCAB728YTO DNA False 2017-12-04 ENCODE 1, 3 ENCFF005WQC, ENCFF537JSG, ENCFF791OAY 7109965 ENCODE Processing Pipeline 7bd5922fc89d2e4167b4d135df5c2582 https://www.encodeproject.org/files/ENCFF935YHM/@@download/ENCFF935YHM.bed.gz GRCh38 released control low read depth, missing genetic modification characterization experiment not submitted to GEO ENCFF454QMF bigBed narrowPeak peaks ENCSR462QZZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF395-human ENCAB728YTO DNA False 2017-12-04 ENCODE 3 ENCFF409RVV 12488881 ENCODE Processing Pipeline 3e06101ec61d88e8e879d7ed0039ef21 https://www.encodeproject.org/files/ENCFF454QMF/@@download/ENCFF454QMF.bigBed GRCh38 released control low read depth, missing genetic modification characterization experiment not submitted to GEO ENCFF959FJF bigBed narrowPeak optimal idr thresholded peaks ENCSR462QZZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF395-human ENCAB728YTO DNA False 2017-12-04 ENCODE 1, 3 ENCFF275HDU 1153873 ENCODE Processing Pipeline 1a85bef59ef7e458ac6dd1dccec70bff https://www.encodeproject.org/files/ENCFF959FJF/@@download/ENCFF959FJF.bigBed GRCh38 released control low read depth, missing genetic modification characterization experiment not submitted to GEO ENCFF734ELX bigBed narrowPeak conservative idr thresholded peaks ENCSR462QZZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF395-human ENCAB728YTO DNA False 2017-12-04 ENCODE 1, 3 ENCFF944YSD 1012058 ENCODE Processing Pipeline 0bc9dfff39b7a7dbc5e43e79bb82007d https://www.encodeproject.org/files/ENCFF734ELX/@@download/ENCFF734ELX.bigBed GRCh38 released control low read depth, missing genetic modification characterization experiment not submitted to GEO ENCFF944YSD bed narrowPeak conservative idr thresholded peaks ENCSR462QZZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF395-human ENCAB728YTO DNA False 2017-12-04 ENCODE 1, 3 ENCFF409RVV, ENCFF419RSJ, ENCFF872BRZ, ENCFF935YHM 408625 ENCODE Processing Pipeline 12d17ee2157f1a55443c817b5ec7f4e8 https://www.encodeproject.org/files/ENCFF944YSD/@@download/ENCFF944YSD.bed.gz GRCh38 released control low read depth, missing genetic modification characterization experiment not submitted to GEO ENCFF317AJS bam unfiltered alignments ENCSR835TCD ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-HDAC8-human ENCAB728YTO DNA False 2016-02-16 ENCODE 1 100 ENCFF391EFO, ENCFF493AAY, ENCFF807MUK 6737370185 ENCODE Processing Pipeline e206b7a4cfd6e686f327b5417209835c https://www.encodeproject.org/files/ENCFF317AJS/@@download/ENCFF317AJS.bam hg19 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF293AFU bam unfiltered alignments ENCSR835TCD ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-HDAC8-human ENCAB728YTO DNA False 2016-02-16 ENCODE 2 100 ENCFF351UCM, ENCFF393ANW, ENCFF807MUK 7564660534 ENCODE Processing Pipeline 5cc670a5c8bc24e38a8a528833081542 https://www.encodeproject.org/files/ENCFF293AFU/@@download/ENCFF293AFU.bam hg19 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF393ANW fastq reads ENCSR835TCD ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-HDAC8-human ENCAB728YTO DNA False 2016-02-16 ENCODE 2 1 100 paired-ended 1 ENCFF351UCM 3694010176 Michael Snyder, Stanford 244572a9eef6a16b35c9d92c3b3454c9 SRA:SRR5112193 https://www.encodeproject.org/files/ENCFF393ANW/@@download/ENCFF393ANW.fastq.gz Illumina HiSeq 2000 /files/ENCFF047NSE/ released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF391EFO fastq reads ENCSR835TCD ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-HDAC8-human ENCAB728YTO DNA False 2016-02-16 ENCODE 1 1 100 paired-ended 2 ENCFF493AAY 3348786595 Michael Snyder, Stanford 4276866089eef9c9fa9ada40b0344eee SRA:SRR5112194 https://www.encodeproject.org/files/ENCFF391EFO/@@download/ENCFF391EFO.fastq.gz Illumina HiSeq 2000 /files/ENCFF743SMH/ released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF351UCM fastq reads ENCSR835TCD ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-HDAC8-human ENCAB728YTO DNA False 2016-02-16 ENCODE 2 1 100 paired-ended 2 ENCFF393ANW 3808048925 Michael Snyder, Stanford 152ea6050107a90b65bb32a7dad8b658 SRA:SRR5112193 https://www.encodeproject.org/files/ENCFF351UCM/@@download/ENCFF351UCM.fastq.gz Illumina HiSeq 2000 /files/ENCFF743SMH/ released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF493AAY fastq reads ENCSR835TCD ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-HDAC8-human ENCAB728YTO DNA False 2016-02-16 ENCODE 1 1 100 paired-ended 1 ENCFF391EFO 3247716115 Michael Snyder, Stanford 9279c92c15e9e314f48e1468fe354a49 SRA:SRR5112194 https://www.encodeproject.org/files/ENCFF493AAY/@@download/ENCFF493AAY.fastq.gz Illumina HiSeq 2000 /files/ENCFF047NSE/ released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF107MLR bam alignments ENCSR835TCD ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-HDAC8-human ENCAB728YTO DNA False 2016-02-16 ENCODE 2 100 ENCFF351UCM, ENCFF393ANW, ENCFF807MUK 4433146397 ENCODE Processing Pipeline d77f9d8c8b50044841ffefda1a577092 https://www.encodeproject.org/files/ENCFF107MLR/@@download/ENCFF107MLR.bam hg19 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF301KAZ bam alignments ENCSR835TCD ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-HDAC8-human ENCAB728YTO DNA False 2016-02-16 ENCODE 1 100 ENCFF391EFO, ENCFF493AAY, ENCFF807MUK 4131118465 ENCODE Processing Pipeline b78d7332c698bf6cf957c67c2ab908eb https://www.encodeproject.org/files/ENCFF301KAZ/@@download/ENCFF301KAZ.bam hg19 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF541KYJ bigWig signal p-value ENCSR835TCD ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-HDAC8-human ENCAB728YTO DNA False 2016-02-16 ENCODE 1, 2 ENCFF107MLR, ENCFF252CHQ, ENCFF301KAZ 1311717566 ENCODE Processing Pipeline d1bfbe9b8b05f983522412ee1725afd1 https://www.encodeproject.org/files/ENCFF541KYJ/@@download/ENCFF541KYJ.bigWig hg19 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF849QGK bigWig fold change over control ENCSR835TCD ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-HDAC8-human ENCAB728YTO DNA False 2016-02-16 ENCODE 2 ENCFF107MLR, ENCFF252CHQ 1133003767 ENCODE Processing Pipeline 512bc9afd8ed50c4b996f3f8e88ae117 https://www.encodeproject.org/files/ENCFF849QGK/@@download/ENCFF849QGK.bigWig hg19 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF156FQS bigWig fold change over control ENCSR835TCD ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-HDAC8-human ENCAB728YTO DNA False 2016-02-16 ENCODE 1, 2 ENCFF107MLR, ENCFF252CHQ, ENCFF301KAZ 1671717838 ENCODE Processing Pipeline 705f2269418513381bae3596f2089284 https://www.encodeproject.org/files/ENCFF156FQS/@@download/ENCFF156FQS.bigWig hg19 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF220RNG bed narrowPeak peaks ENCSR835TCD ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-HDAC8-human ENCAB728YTO DNA False 2016-02-16 ENCODE 2 ENCFF107MLR, ENCFF252CHQ 6606473 ENCODE Processing Pipeline 43932076034d45a823611b45b7834918 https://www.encodeproject.org/files/ENCFF220RNG/@@download/ENCFF220RNG.bed.gz hg19 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF317AUR bigWig signal p-value ENCSR835TCD ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-HDAC8-human ENCAB728YTO DNA False 2016-02-16 ENCODE 1 ENCFF252CHQ, ENCFF301KAZ 979295076 ENCODE Processing Pipeline 3df360c75d47ce304cadc9a3b3f12ae6 https://www.encodeproject.org/files/ENCFF317AUR/@@download/ENCFF317AUR.bigWig hg19 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF929RXL bigBed narrowPeak peaks ENCSR835TCD ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-HDAC8-human ENCAB728YTO DNA False 2016-02-16 ENCODE 2 ENCFF220RNG 13210202 ENCODE Processing Pipeline 6fe282ec9f69e48b89140b552f023e6f https://www.encodeproject.org/files/ENCFF929RXL/@@download/ENCFF929RXL.bigBed hg19 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF093SFZ bigWig signal p-value ENCSR835TCD ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-HDAC8-human ENCAB728YTO DNA False 2016-02-16 ENCODE 2 ENCFF107MLR, ENCFF252CHQ 1124540908 ENCODE Processing Pipeline f7577f0df8bcc537b4f953ad1e7c6368 https://www.encodeproject.org/files/ENCFF093SFZ/@@download/ENCFF093SFZ.bigWig hg19 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF867FAH bed narrowPeak peaks ENCSR835TCD ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-HDAC8-human ENCAB728YTO DNA False 2016-02-16 ENCODE 1 ENCFF252CHQ, ENCFF301KAZ 6432766 ENCODE Processing Pipeline 9f722049e31e1819e6720a49090a9aea https://www.encodeproject.org/files/ENCFF867FAH/@@download/ENCFF867FAH.bed.gz hg19 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF105YLZ bigWig fold change over control ENCSR835TCD ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-HDAC8-human ENCAB728YTO DNA False 2016-02-16 ENCODE 1 ENCFF252CHQ, ENCFF301KAZ 1087567569 ENCODE Processing Pipeline 88c6c58dae1baaa836fa9cb5d275e8e7 https://www.encodeproject.org/files/ENCFF105YLZ/@@download/ENCFF105YLZ.bigWig hg19 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF184YPD bigBed narrowPeak peaks ENCSR835TCD ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-HDAC8-human ENCAB728YTO DNA False 2016-02-16 ENCODE 1, 2 ENCFF690UHD 13175734 ENCODE Processing Pipeline 9801c9ebebf03ac671fde15af2a20d7c https://www.encodeproject.org/files/ENCFF184YPD/@@download/ENCFF184YPD.bigBed hg19 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF690UHD bed narrowPeak peaks ENCSR835TCD ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-HDAC8-human ENCAB728YTO DNA False 2016-02-16 ENCODE 1, 2 ENCFF107MLR, ENCFF252CHQ, ENCFF301KAZ 7204826 ENCODE Processing Pipeline 049afae9508ac7be86a5e93e1e645d93 https://www.encodeproject.org/files/ENCFF690UHD/@@download/ENCFF690UHD.bed.gz hg19 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF046DMS bigBed narrowPeak peaks ENCSR835TCD ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-HDAC8-human ENCAB728YTO DNA False 2016-02-16 ENCODE 1 ENCFF867FAH 13288286 ENCODE Processing Pipeline 727ab7356c97d8ccaaad28ffe2c3b7fa https://www.encodeproject.org/files/ENCFF046DMS/@@download/ENCFF046DMS.bigBed hg19 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF068FBW bam unfiltered alignments ENCSR835TCD ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-HDAC8-human ENCAB728YTO DNA False 2016-02-16 ENCODE 1 100 ENCFF391EFO, ENCFF493AAY, ENCFF643CGH 6738712337 ENCODE Processing Pipeline b68dd8822879c4a58aca3b2a4d55628d https://www.encodeproject.org/files/ENCFF068FBW/@@download/ENCFF068FBW.bam GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF150IJU bam unfiltered alignments ENCSR835TCD ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-HDAC8-human ENCAB728YTO DNA False 2016-02-16 ENCODE 2 100 ENCFF351UCM, ENCFF393ANW, ENCFF643CGH 7564164500 ENCODE Processing Pipeline 0d532aca18ca4b7479cbf82e2220bbc3 https://www.encodeproject.org/files/ENCFF150IJU/@@download/ENCFF150IJU.bam GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF997BDJ bam alignments ENCSR835TCD ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-HDAC8-human ENCAB728YTO DNA False 2016-02-16 ENCODE 1 100 ENCFF391EFO, ENCFF493AAY, ENCFF643CGH 4133545622 ENCODE Processing Pipeline 1e0a9d7ddd4d21f2b038716fd03a5201 https://www.encodeproject.org/files/ENCFF997BDJ/@@download/ENCFF997BDJ.bam GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF285FGV bam alignments ENCSR835TCD ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-HDAC8-human ENCAB728YTO DNA False 2016-02-16 ENCODE 2 100 ENCFF351UCM, ENCFF393ANW, ENCFF643CGH 4435611242 ENCODE Processing Pipeline 63b21110a9e393181370e53662dd9f1b https://www.encodeproject.org/files/ENCFF285FGV/@@download/ENCFF285FGV.bam GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF145REP bigWig signal p-value ENCSR835TCD ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-HDAC8-human ENCAB728YTO DNA False 2016-02-16 ENCODE 1 ENCFF399WOX, ENCFF997BDJ 866223573 ENCODE Processing Pipeline 4db9da5c4bf747702329db45b823990f https://www.encodeproject.org/files/ENCFF145REP/@@download/ENCFF145REP.bigWig GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF669QDZ bigWig signal p-value ENCSR835TCD ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-HDAC8-human ENCAB728YTO DNA False 2016-02-16 ENCODE 2 ENCFF285FGV, ENCFF399WOX 953450041 ENCODE Processing Pipeline 01e3b2025b84f0bebeeb308da8a59dd7 https://www.encodeproject.org/files/ENCFF669QDZ/@@download/ENCFF669QDZ.bigWig GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF118JQZ bigWig signal p-value ENCSR835TCD ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-HDAC8-human ENCAB728YTO DNA False 2016-02-16 ENCODE 1, 2 ENCFF285FGV, ENCFF399WOX, ENCFF997BDJ 1284730895 ENCODE Processing Pipeline 32154a3611d74399ddd189a44cdd3d8c https://www.encodeproject.org/files/ENCFF118JQZ/@@download/ENCFF118JQZ.bigWig GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF359ZLN bigWig fold change over control ENCSR835TCD ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-HDAC8-human ENCAB728YTO DNA False 2016-02-16 ENCODE 1 ENCFF399WOX, ENCFF997BDJ 1086993792 ENCODE Processing Pipeline c7715efda923cca364db90d055e8d33b https://www.encodeproject.org/files/ENCFF359ZLN/@@download/ENCFF359ZLN.bigWig GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF040OQT bigWig fold change over control ENCSR835TCD ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-HDAC8-human ENCAB728YTO DNA False 2016-02-16 ENCODE 2 ENCFF285FGV, ENCFF399WOX 1137547703 ENCODE Processing Pipeline 008b2c82ae21db8a9e9be63909807350 https://www.encodeproject.org/files/ENCFF040OQT/@@download/ENCFF040OQT.bigWig GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF584SIV bigWig fold change over control ENCSR835TCD ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-HDAC8-human ENCAB728YTO DNA False 2016-02-16 ENCODE 1, 2 ENCFF285FGV, ENCFF399WOX, ENCFF997BDJ 1640092843 ENCODE Processing Pipeline d9e0159d41ed72981436e4b6a01536d1 https://www.encodeproject.org/files/ENCFF584SIV/@@download/ENCFF584SIV.bigWig GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF216QWU bed narrowPeak peaks ENCSR835TCD ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-HDAC8-human ENCAB728YTO DNA False 2016-02-16 ENCODE 2 ENCFF285FGV, ENCFF399WOX 6455792 ENCODE Processing Pipeline f5f97d0e5db99572e6c1b0b0b5ff25d9 https://www.encodeproject.org/files/ENCFF216QWU/@@download/ENCFF216QWU.bed.gz GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF256EKC bigBed narrowPeak peaks ENCSR835TCD ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-HDAC8-human ENCAB728YTO DNA False 2016-02-16 ENCODE 1 ENCFF033BMM 13299826 ENCODE Processing Pipeline 00fcf217b832601664abd98b4a4dafb7 https://www.encodeproject.org/files/ENCFF256EKC/@@download/ENCFF256EKC.bigBed GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF868AOX bigBed narrowPeak peaks ENCSR835TCD ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-HDAC8-human ENCAB728YTO DNA False 2016-02-16 ENCODE 2 ENCFF216QWU 13223116 ENCODE Processing Pipeline d9fa0ae31c9ad1c382004564ab0ce0aa https://www.encodeproject.org/files/ENCFF868AOX/@@download/ENCFF868AOX.bigBed GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF033BMM bed narrowPeak peaks ENCSR835TCD ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-HDAC8-human ENCAB728YTO DNA False 2016-02-16 ENCODE 1 ENCFF399WOX, ENCFF997BDJ 6272804 ENCODE Processing Pipeline 32c7f37fb807b89f0e4e26f5db0d6c19 https://www.encodeproject.org/files/ENCFF033BMM/@@download/ENCFF033BMM.bed.gz GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF349GBE bed narrowPeak optimal idr thresholded peaks ENCSR835TCD ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-HDAC8-human ENCAB728YTO DNA False 2016-02-16 ENCODE 1, 2 ENCFF033BMM, ENCFF216QWU, ENCFF419RSJ, ENCFF914ZXX 190898 ENCODE Processing Pipeline 26187d9ca672df310af6a379ceb8ab02 https://www.encodeproject.org/files/ENCFF349GBE/@@download/ENCFF349GBE.bed.gz GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF489ZXV bed narrowPeak conservative idr thresholded peaks ENCSR835TCD ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-HDAC8-human ENCAB728YTO DNA False 2016-02-16 ENCODE 1, 2 ENCFF033BMM, ENCFF216QWU, ENCFF419RSJ, ENCFF914ZXX 125559 ENCODE Processing Pipeline b0aad1903b66df79384adc9aeefde087 https://www.encodeproject.org/files/ENCFF489ZXV/@@download/ENCFF489ZXV.bed.gz GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF914ZXX bed narrowPeak peaks ENCSR835TCD ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-HDAC8-human ENCAB728YTO DNA False 2016-02-16 ENCODE 1, 2 ENCFF285FGV, ENCFF399WOX, ENCFF997BDJ 7147258 ENCODE Processing Pipeline c69b73bcf4729b550a0aafa41f2ecfe8 https://www.encodeproject.org/files/ENCFF914ZXX/@@download/ENCFF914ZXX.bed.gz GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF857JSZ bigBed narrowPeak conservative idr thresholded peaks ENCSR835TCD ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-HDAC8-human ENCAB728YTO DNA False 2016-02-16 ENCODE 1, 2 ENCFF489ZXV 322569 ENCODE Processing Pipeline 5964563d1a2df78398b17710ada3d1ee https://www.encodeproject.org/files/ENCFF857JSZ/@@download/ENCFF857JSZ.bigBed GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF616AKS bigBed narrowPeak peaks ENCSR835TCD ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-HDAC8-human ENCAB728YTO DNA False 2016-02-16 ENCODE 1, 2 ENCFF914ZXX 13195425 ENCODE Processing Pipeline 956eef2ef4362cbb357be73f8e56214e https://www.encodeproject.org/files/ENCFF616AKS/@@download/ENCFF616AKS.bigBed GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF506TNB bigBed narrowPeak optimal idr thresholded peaks ENCSR835TCD ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-HDAC8-human ENCAB728YTO DNA False 2016-02-16 ENCODE 1, 2 ENCFF349GBE 433860 ENCODE Processing Pipeline e68c0977359a2abbc706a7ea3353d44f https://www.encodeproject.org/files/ENCFF506TNB/@@download/ENCFF506TNB.bigBed GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF939ZFS bed narrowPeak optimal idr thresholded peaks ENCSR835TCD ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-HDAC8-human ENCAB728YTO DNA False 2016-02-16 ENCODE 1, 2 ENCFF001TDO, ENCFF220RNG, ENCFF690UHD, ENCFF867FAH 151716 ENCODE Processing Pipeline a6a46e86e184939dd243d3fdf746998a https://www.encodeproject.org/files/ENCFF939ZFS/@@download/ENCFF939ZFS.bed.gz hg19 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF785WJT bigBed narrowPeak optimal idr thresholded peaks ENCSR835TCD ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-HDAC8-human ENCAB728YTO DNA False 2016-02-16 ENCODE 1, 2 ENCFF939ZFS 308887 ENCODE Processing Pipeline 213168d94e5325c0d3dfb815af33f9d6 https://www.encodeproject.org/files/ENCFF785WJT/@@download/ENCFF785WJT.bigBed hg19 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF531QQR bed narrowPeak conservative idr thresholded peaks ENCSR835TCD ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-HDAC8-human ENCAB728YTO DNA False 2016-02-16 ENCODE 1, 2 ENCFF001TDO, ENCFF220RNG, ENCFF690UHD, ENCFF867FAH 100665 ENCODE Processing Pipeline b137a79da588cfb9e64ca67ee265043d https://www.encodeproject.org/files/ENCFF531QQR/@@download/ENCFF531QQR.bed.gz hg19 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF775NTF bigBed narrowPeak conservative idr thresholded peaks ENCSR835TCD ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-HDAC8-human ENCAB728YTO DNA False 2016-02-16 ENCODE 1, 2 ENCFF531QQR 236998 ENCODE Processing Pipeline e9ddad09c07b9e7b3baba3df2b9b7ac3 https://www.encodeproject.org/files/ENCFF775NTF/@@download/ENCFF775NTF.bigBed hg19 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF611IJV bam unfiltered alignments ENCSR635GTR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-TEAD2-human ENCAB728YTO DNA False 2016-03-02 ENCODE 2 100 ENCFF335SYB, ENCFF734FMS, ENCFF807MUK 4702247540 ENCODE Processing Pipeline b670f60e16a34bf799c5395fa8bd36e2 https://www.encodeproject.org/files/ENCFF611IJV/@@download/ENCFF611IJV.bam hg19 released control low read depth, missing genetic modification characterization ENCFF666PDF bam unfiltered alignments ENCSR635GTR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-TEAD2-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1 100 ENCFF442MPQ, ENCFF677HXI, ENCFF807MUK 4984000479 ENCODE Processing Pipeline f86daccc5031be9cdc0fc5404e17f423 https://www.encodeproject.org/files/ENCFF666PDF/@@download/ENCFF666PDF.bam hg19 released control low read depth, missing genetic modification characterization ENCFF335SYB fastq reads ENCSR635GTR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-TEAD2-human ENCAB728YTO DNA False 2016-03-02 ENCODE 2 1 100 paired-ended 2 ENCFF734FMS 2166780455 Michael Snyder, Stanford 87a522019e938c0afd5b0aae0c0e6579 SRA:SRR5112058 https://www.encodeproject.org/files/ENCFF335SYB/@@download/ENCFF335SYB.fastq.gz Illumina HiSeq 2000 /files/ENCFF031XFH/ released control low read depth, missing genetic modification characterization ENCFF734FMS fastq reads ENCSR635GTR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-TEAD2-human ENCAB728YTO DNA False 2016-03-02 ENCODE 2 1 100 paired-ended 1 ENCFF335SYB 2139855852 Michael Snyder, Stanford d01db0edd5d9663da80d239dfa085776 SRA:SRR5112058 https://www.encodeproject.org/files/ENCFF734FMS/@@download/ENCFF734FMS.fastq.gz Illumina HiSeq 2000 /files/ENCFF717YHU/ released control low read depth, missing genetic modification characterization ENCFF442MPQ fastq reads ENCSR635GTR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-TEAD2-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1 1 100 paired-ended 2 ENCFF677HXI 2301136146 Michael Snyder, Stanford c1d1762778cba7efd038911f63b63810 SRA:SRR5112057 https://www.encodeproject.org/files/ENCFF442MPQ/@@download/ENCFF442MPQ.fastq.gz Illumina HiSeq 2000 /files/ENCFF031XFH/ released control low read depth, missing genetic modification characterization ENCFF677HXI fastq reads ENCSR635GTR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-TEAD2-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1 1 100 paired-ended 1 ENCFF442MPQ 2248973390 Michael Snyder, Stanford 59cc495afd283be387321c13b5c92ce9 SRA:SRR5112057 https://www.encodeproject.org/files/ENCFF677HXI/@@download/ENCFF677HXI.fastq.gz Illumina HiSeq 2000 /files/ENCFF717YHU/ released control low read depth, missing genetic modification characterization ENCFF578CTB bam alignments ENCSR635GTR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-TEAD2-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1 100 ENCFF442MPQ, ENCFF677HXI, ENCFF807MUK 4271614014 ENCODE Processing Pipeline 4e8dbc5dc7ae4247a9e1f46da7d3405d https://www.encodeproject.org/files/ENCFF578CTB/@@download/ENCFF578CTB.bam hg19 released control low read depth, missing genetic modification characterization ENCFF197TMV bam alignments ENCSR635GTR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-TEAD2-human ENCAB728YTO DNA False 2016-03-02 ENCODE 2 100 ENCFF335SYB, ENCFF734FMS, ENCFF807MUK 4043923261 ENCODE Processing Pipeline 7fa1c385b5b9fc312a619e0273c61892 https://www.encodeproject.org/files/ENCFF197TMV/@@download/ENCFF197TMV.bam hg19 released control low read depth, missing genetic modification characterization ENCFF970DGK bigWig signal p-value ENCSR635GTR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-TEAD2-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1 ENCFF189PKR, ENCFF578CTB 733668920 ENCODE Processing Pipeline 7ceae979df68ff8a6ec28624ec0edcbf https://www.encodeproject.org/files/ENCFF970DGK/@@download/ENCFF970DGK.bigWig hg19 released control low read depth, missing genetic modification characterization ENCFF029HEO bigWig signal p-value ENCSR635GTR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-TEAD2-human ENCAB728YTO DNA False 2016-03-02 ENCODE 2 ENCFF189PKR, ENCFF197TMV 762262698 ENCODE Processing Pipeline c7cc8c0f3f058d7c42f09b078fb04ce5 https://www.encodeproject.org/files/ENCFF029HEO/@@download/ENCFF029HEO.bigWig hg19 released control low read depth, missing genetic modification characterization ENCFF561RXA bigWig signal p-value ENCSR635GTR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-TEAD2-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF189PKR, ENCFF197TMV, ENCFF578CTB 721622443 ENCODE Processing Pipeline 333b1ddb89751dad7d6dd585ad39aea5 https://www.encodeproject.org/files/ENCFF561RXA/@@download/ENCFF561RXA.bigWig hg19 released control low read depth, missing genetic modification characterization ENCFF158ZSD bigWig fold change over control ENCSR635GTR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-TEAD2-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1 ENCFF189PKR, ENCFF578CTB 894833615 ENCODE Processing Pipeline f79a65b237ec773841edf233c94dc2ce https://www.encodeproject.org/files/ENCFF158ZSD/@@download/ENCFF158ZSD.bigWig hg19 released control low read depth, missing genetic modification characterization ENCFF048PQD bigWig fold change over control ENCSR635GTR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-TEAD2-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF189PKR, ENCFF197TMV, ENCFF578CTB 1409716351 ENCODE Processing Pipeline c55bb1ec6f170e528a1eef4794527c43 https://www.encodeproject.org/files/ENCFF048PQD/@@download/ENCFF048PQD.bigWig hg19 released control low read depth, missing genetic modification characterization ENCFF144KKG bigWig fold change over control ENCSR635GTR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-TEAD2-human ENCAB728YTO DNA False 2016-03-02 ENCODE 2 ENCFF189PKR, ENCFF197TMV 883405994 ENCODE Processing Pipeline 17bc65567d7c2b1db44942e3ad75bc95 https://www.encodeproject.org/files/ENCFF144KKG/@@download/ENCFF144KKG.bigWig hg19 released control low read depth, missing genetic modification characterization ENCFF538FYO bigBed narrowPeak peaks ENCSR635GTR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-TEAD2-human ENCAB728YTO DNA False 2016-03-02 ENCODE 2 ENCFF777YSR 11168556 ENCODE Processing Pipeline b45a533ce24eb8394e721b47198104df https://www.encodeproject.org/files/ENCFF538FYO/@@download/ENCFF538FYO.bigBed hg19 released control low read depth, missing genetic modification characterization ENCFF777YSR bed narrowPeak peaks ENCSR635GTR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-TEAD2-human ENCAB728YTO DNA False 2016-03-02 ENCODE 2 ENCFF189PKR, ENCFF197TMV 5399571 ENCODE Processing Pipeline 2648b73e01a12bf1d770eab481d3b4cd https://www.encodeproject.org/files/ENCFF777YSR/@@download/ENCFF777YSR.bed.gz hg19 released control low read depth, missing genetic modification characterization ENCFF267PBD bed narrowPeak peaks ENCSR635GTR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-TEAD2-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF189PKR, ENCFF197TMV, ENCFF578CTB 6518597 ENCODE Processing Pipeline 0a4010fb28336840612f4e3a90f0bd36 https://www.encodeproject.org/files/ENCFF267PBD/@@download/ENCFF267PBD.bed.gz hg19 released control low read depth, missing genetic modification characterization ENCFF508MUL bigBed narrowPeak peaks ENCSR635GTR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-TEAD2-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1 ENCFF828PUB 11146356 ENCODE Processing Pipeline 8a43ff6398861fb05617ba5cd9602df6 https://www.encodeproject.org/files/ENCFF508MUL/@@download/ENCFF508MUL.bigBed hg19 released control low read depth, missing genetic modification characterization ENCFF828PUB bed narrowPeak peaks ENCSR635GTR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-TEAD2-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1 ENCFF189PKR, ENCFF578CTB 5546344 ENCODE Processing Pipeline c47fb2cc45bcf3ff555033405150d4b0 https://www.encodeproject.org/files/ENCFF828PUB/@@download/ENCFF828PUB.bed.gz hg19 released control low read depth, missing genetic modification characterization ENCFF093SKC bigBed narrowPeak peaks ENCSR635GTR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-TEAD2-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF267PBD 11159218 ENCODE Processing Pipeline b7c9693fef1d3160ad0d6c4585868406 https://www.encodeproject.org/files/ENCFF093SKC/@@download/ENCFF093SKC.bigBed hg19 released control low read depth, missing genetic modification characterization ENCFF363TIR bam unfiltered alignments ENCSR635GTR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-TEAD2-human ENCAB728YTO DNA False 2016-03-02 ENCODE 2 100 ENCFF335SYB, ENCFF643CGH, ENCFF734FMS 4709813574 ENCODE Processing Pipeline 2a18d6ea7dac32c64b332219515445bd https://www.encodeproject.org/files/ENCFF363TIR/@@download/ENCFF363TIR.bam GRCh38 released control low read depth, missing genetic modification characterization ENCFF192VLT bam unfiltered alignments ENCSR635GTR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-TEAD2-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1 100 ENCFF442MPQ, ENCFF643CGH, ENCFF677HXI 4992998410 ENCODE Processing Pipeline 2897e73a3f8e53e46fbf81bbb7f169b1 https://www.encodeproject.org/files/ENCFF192VLT/@@download/ENCFF192VLT.bam GRCh38 released control low read depth, missing genetic modification characterization ENCFF949ENV bam alignments ENCSR635GTR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-TEAD2-human ENCAB728YTO DNA False 2016-03-02 ENCODE 2 100 ENCFF335SYB, ENCFF643CGH, ENCFF734FMS 4045558156 ENCODE Processing Pipeline 3dd7575c03c8e515754de16ec407f82f https://www.encodeproject.org/files/ENCFF949ENV/@@download/ENCFF949ENV.bam GRCh38 released control low read depth, missing genetic modification characterization ENCFF280AEF bam alignments ENCSR635GTR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-TEAD2-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1 100 ENCFF442MPQ, ENCFF643CGH, ENCFF677HXI 4273869269 ENCODE Processing Pipeline 7cbf1e4c6090e0492436eb8595abe6ab https://www.encodeproject.org/files/ENCFF280AEF/@@download/ENCFF280AEF.bam GRCh38 released control low read depth, missing genetic modification characterization ENCFF593VMC bigWig signal p-value ENCSR635GTR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-TEAD2-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1 ENCFF002WSA, ENCFF280AEF 731151513 ENCODE Processing Pipeline ac243b6c9da6c735bdc0da894e7d6a81 https://www.encodeproject.org/files/ENCFF593VMC/@@download/ENCFF593VMC.bigWig GRCh38 released control low read depth, missing genetic modification characterization ENCFF336BWO bigWig signal p-value ENCSR635GTR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-TEAD2-human ENCAB728YTO DNA False 2016-03-02 ENCODE 2 ENCFF002WSA, ENCFF949ENV 734676768 ENCODE Processing Pipeline 5778b96ff6b5aa90866759e6b3ac8bdb https://www.encodeproject.org/files/ENCFF336BWO/@@download/ENCFF336BWO.bigWig GRCh38 released control low read depth, missing genetic modification characterization ENCFF697YIB bigWig signal p-value ENCSR635GTR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-TEAD2-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF002WSA, ENCFF280AEF, ENCFF949ENV 726176145 ENCODE Processing Pipeline 118f31d817874ab43df807f3d0f5c3b3 https://www.encodeproject.org/files/ENCFF697YIB/@@download/ENCFF697YIB.bigWig GRCh38 released control low read depth, missing genetic modification characterization ENCFF988ULJ bigWig fold change over control ENCSR635GTR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-TEAD2-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1 ENCFF002WSA, ENCFF280AEF 883868191 ENCODE Processing Pipeline 7964ae951398cb83a19cdce275a7b221 https://www.encodeproject.org/files/ENCFF988ULJ/@@download/ENCFF988ULJ.bigWig GRCh38 released control low read depth, missing genetic modification characterization ENCFF653TNV bigWig fold change over control ENCSR635GTR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-TEAD2-human ENCAB728YTO DNA False 2016-03-02 ENCODE 2 ENCFF002WSA, ENCFF949ENV 865440574 ENCODE Processing Pipeline 485b7431ab5b741a67197e37a6136673 https://www.encodeproject.org/files/ENCFF653TNV/@@download/ENCFF653TNV.bigWig GRCh38 released control low read depth, missing genetic modification characterization ENCFF923VES bigWig fold change over control ENCSR635GTR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-TEAD2-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF002WSA, ENCFF280AEF, ENCFF949ENV 1424819527 ENCODE Processing Pipeline 2205c8722743dc62c60f3570f75a06f1 https://www.encodeproject.org/files/ENCFF923VES/@@download/ENCFF923VES.bigWig GRCh38 released control low read depth, missing genetic modification characterization ENCFF678UKK bed narrowPeak peaks ENCSR635GTR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-TEAD2-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF002WSA, ENCFF280AEF, ENCFF949ENV 6350185 ENCODE Processing Pipeline 2551835d3f191855d8adae18b621e5e3 https://www.encodeproject.org/files/ENCFF678UKK/@@download/ENCFF678UKK.bed.gz GRCh38 released control low read depth, missing genetic modification characterization ENCFF449DVG bigBed narrowPeak peaks ENCSR635GTR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-TEAD2-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1 ENCFF808YPC 11096184 ENCODE Processing Pipeline bfa15a3e0880f62e448c1e2623bffdc2 https://www.encodeproject.org/files/ENCFF449DVG/@@download/ENCFF449DVG.bigBed GRCh38 released control low read depth, missing genetic modification characterization ENCFF564BED bigBed narrowPeak peaks ENCSR635GTR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-TEAD2-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF678UKK 11172479 ENCODE Processing Pipeline 18a2d31a1e2f42a87c6c44694862f138 https://www.encodeproject.org/files/ENCFF564BED/@@download/ENCFF564BED.bigBed GRCh38 released control low read depth, missing genetic modification characterization ENCFF808YPC bed narrowPeak peaks ENCSR635GTR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-TEAD2-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1 ENCFF002WSA, ENCFF280AEF 5346386 ENCODE Processing Pipeline d12693d9d3fcbc3cdeb91c3d7afef09a https://www.encodeproject.org/files/ENCFF808YPC/@@download/ENCFF808YPC.bed.gz GRCh38 released control low read depth, missing genetic modification characterization ENCFF622SEO bed narrowPeak peaks ENCSR635GTR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-TEAD2-human ENCAB728YTO DNA False 2016-03-02 ENCODE 2 ENCFF002WSA, ENCFF949ENV 5209718 ENCODE Processing Pipeline a95a33862ee562b6b5966f64bd03b457 https://www.encodeproject.org/files/ENCFF622SEO/@@download/ENCFF622SEO.bed.gz GRCh38 released control low read depth, missing genetic modification characterization ENCFF380IBP bigBed narrowPeak peaks ENCSR635GTR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-TEAD2-human ENCAB728YTO DNA False 2016-03-02 ENCODE 2 ENCFF622SEO 11114680 ENCODE Processing Pipeline acfb101988107a46cc44b06e68b23142 https://www.encodeproject.org/files/ENCFF380IBP/@@download/ENCFF380IBP.bigBed GRCh38 released control low read depth, missing genetic modification characterization ENCFF895ZGS bed narrowPeak conservative idr thresholded peaks ENCSR635GTR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-TEAD2-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF419RSJ, ENCFF622SEO, ENCFF678UKK, ENCFF808YPC 84839 ENCODE Processing Pipeline 4457384fa6689d20db3e4524f7bc804e https://www.encodeproject.org/files/ENCFF895ZGS/@@download/ENCFF895ZGS.bed.gz GRCh38 released control low read depth, missing genetic modification characterization ENCFF716MRR bigBed narrowPeak conservative idr thresholded peaks ENCSR635GTR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-TEAD2-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF895ZGS 188752 ENCODE Processing Pipeline 8d5a35a8b3ddb3f03809a0054667d570 https://www.encodeproject.org/files/ENCFF716MRR/@@download/ENCFF716MRR.bigBed GRCh38 released control low read depth, missing genetic modification characterization ENCFF563LGJ bed narrowPeak optimal idr thresholded peaks ENCSR635GTR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-TEAD2-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF419RSJ, ENCFF622SEO, ENCFF678UKK, ENCFF808YPC 122484 ENCODE Processing Pipeline 4a765afba563849acd43fff951aeb893 https://www.encodeproject.org/files/ENCFF563LGJ/@@download/ENCFF563LGJ.bed.gz GRCh38 released control low read depth, missing genetic modification characterization ENCFF133ALW bigBed narrowPeak optimal idr thresholded peaks ENCSR635GTR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-TEAD2-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF563LGJ 283300 ENCODE Processing Pipeline 89ca7039627c8da47a6747dc94bd6ef7 https://www.encodeproject.org/files/ENCFF133ALW/@@download/ENCFF133ALW.bigBed GRCh38 released control low read depth, missing genetic modification characterization ENCFF361IAV bigBed narrowPeak conservative idr thresholded peaks ENCSR635GTR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-TEAD2-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF006PAK 165313 ENCODE Processing Pipeline 22ba3fd52edf9137748c0cd9104746e9 https://www.encodeproject.org/files/ENCFF361IAV/@@download/ENCFF361IAV.bigBed hg19 released control low read depth, missing genetic modification characterization ENCFF006PAK bed narrowPeak conservative idr thresholded peaks ENCSR635GTR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-TEAD2-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF001TDO, ENCFF267PBD, ENCFF777YSR, ENCFF828PUB 69474 ENCODE Processing Pipeline ababe80d1949f5ff877d8575537b71e1 https://www.encodeproject.org/files/ENCFF006PAK/@@download/ENCFF006PAK.bed.gz hg19 released control low read depth, missing genetic modification characterization ENCFF619BDC bed narrowPeak optimal idr thresholded peaks ENCSR635GTR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-TEAD2-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF001TDO, ENCFF267PBD, ENCFF777YSR, ENCFF828PUB 102575 ENCODE Processing Pipeline 3f2a8bb473746d1fb1310641b85ce509 https://www.encodeproject.org/files/ENCFF619BDC/@@download/ENCFF619BDC.bed.gz hg19 released control low read depth, missing genetic modification characterization ENCFF537TUO bigBed narrowPeak optimal idr thresholded peaks ENCSR635GTR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-TEAD2-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF619BDC 207777 ENCODE Processing Pipeline faa667b1c9107d29ca03b54d525c1bfd https://www.encodeproject.org/files/ENCFF537TUO/@@download/ENCFF537TUO.bigBed hg19 released control low read depth, missing genetic modification characterization ENCFF287GOE fastq reads ENCSR519WMW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCC2-human ENCAB313DWJ DNA False 2017-12-04 ENCODE 1 1 100 paired-ended 2 ENCFF124VKG 2078535164 Michael Snyder, Stanford 7dd56a9ab141a78d9fb2189fe75ccb82 https://www.encodeproject.org/files/ENCFF287GOE/@@download/ENCFF287GOE.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFA/ released low read depth, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity experiment not submitted to GEO ENCFF124VKG fastq reads ENCSR519WMW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCC2-human ENCAB313DWJ DNA False 2017-12-04 ENCODE 1 1 100 paired-ended 1 ENCFF287GOE 2013733135 Michael Snyder, Stanford 89923a6d4c1b4c910e0ee7185cb9ae81 https://www.encodeproject.org/files/ENCFF124VKG/@@download/ENCFF124VKG.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFD/ released low read depth, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity experiment not submitted to GEO ENCFF809LBJ fastq reads ENCSR519WMW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCC2-human ENCAB313DWJ DNA False 2017-12-04 ENCODE 3 1 101 paired-ended 1 ENCFF147AFV 2472434240 Michael Snyder, Stanford c0f5cb848029c670e9f686d98b7f95c7 https://www.encodeproject.org/files/ENCFF809LBJ/@@download/ENCFF809LBJ.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFD/ released low read depth, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity experiment not submitted to GEO ENCFF147AFV fastq reads ENCSR519WMW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCC2-human ENCAB313DWJ DNA False 2017-12-04 ENCODE 3 1 101 paired-ended 2 ENCFF809LBJ 2508306664 Michael Snyder, Stanford 06bfe03274fcbded2b7eecbe3aa9b209 https://www.encodeproject.org/files/ENCFF147AFV/@@download/ENCFF147AFV.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFA/ released low read depth, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity experiment not submitted to GEO ENCFF967JVA bam unfiltered alignments ENCSR519WMW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCC2-human ENCAB313DWJ DNA False 2017-12-04 ENCODE 3 101 ENCFF147AFV, ENCFF643CGH, ENCFF809LBJ 4695792773 ENCODE Processing Pipeline e9335012287df9de9c0bcbb7f8bcf42c https://www.encodeproject.org/files/ENCFF967JVA/@@download/ENCFF967JVA.bam GRCh38 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity experiment not submitted to GEO ENCFF437HNK bam alignments ENCSR519WMW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCC2-human ENCAB313DWJ DNA False 2017-12-04 ENCODE 3 101 ENCFF147AFV, ENCFF643CGH, ENCFF809LBJ 3279607400 ENCODE Processing Pipeline 08df1b7ce3e5876b41704119b32ebe86 https://www.encodeproject.org/files/ENCFF437HNK/@@download/ENCFF437HNK.bam GRCh38 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity experiment not submitted to GEO ENCFF877GJT bam unfiltered alignments ENCSR519WMW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCC2-human ENCAB313DWJ DNA False 2017-12-04 ENCODE 3 101 ENCFF147AFV, ENCFF807MUK, ENCFF809LBJ 4693696700 ENCODE Processing Pipeline d750de67b8852f71c6e056154e420abd https://www.encodeproject.org/files/ENCFF877GJT/@@download/ENCFF877GJT.bam hg19 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity experiment not submitted to GEO ENCFF269TSX bam alignments ENCSR519WMW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCC2-human ENCAB313DWJ DNA False 2017-12-04 ENCODE 3 101 ENCFF147AFV, ENCFF807MUK, ENCFF809LBJ 3277796505 ENCODE Processing Pipeline 45db1e2977f04f49d9da1383ab6f00aa https://www.encodeproject.org/files/ENCFF269TSX/@@download/ENCFF269TSX.bam hg19 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity experiment not submitted to GEO ENCFF397UJK bigWig signal p-value ENCSR519WMW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCC2-human ENCAB313DWJ DNA False 2017-12-04 ENCODE 3 ENCFF051LWI, ENCFF269TSX 893319961 ENCODE Processing Pipeline d5a25bd7c48b35870cff3331fbf2ea4f https://www.encodeproject.org/files/ENCFF397UJK/@@download/ENCFF397UJK.bigWig hg19 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity experiment not submitted to GEO ENCFF478OFI bigWig fold change over control ENCSR519WMW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCC2-human ENCAB313DWJ DNA False 2017-12-04 ENCODE 3 ENCFF051LWI, ENCFF269TSX 1002689988 ENCODE Processing Pipeline 92bd7967a084278871629a336f0ad624 https://www.encodeproject.org/files/ENCFF478OFI/@@download/ENCFF478OFI.bigWig hg19 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity experiment not submitted to GEO ENCFF242LUG bigWig fold change over control ENCSR519WMW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCC2-human ENCAB313DWJ DNA False 2017-12-04 ENCODE 3 ENCFF227IZS, ENCFF437HNK 997530649 ENCODE Processing Pipeline 4c478b3d96622f17ef6d17f899f8e448 https://www.encodeproject.org/files/ENCFF242LUG/@@download/ENCFF242LUG.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity experiment not submitted to GEO ENCFF309CYH bigBed narrowPeak peaks ENCSR519WMW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCC2-human ENCAB313DWJ DNA False 2017-12-04 ENCODE 3 ENCFF014LYB 13145381 ENCODE Processing Pipeline 9cabdb2b704b293c6ecb9a8cc232b73f https://www.encodeproject.org/files/ENCFF309CYH/@@download/ENCFF309CYH.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity experiment not submitted to GEO ENCFF947YAZ bed narrowPeak peaks ENCSR519WMW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCC2-human ENCAB313DWJ DNA False 2017-12-04 ENCODE 3 ENCFF051LWI, ENCFF269TSX 6699428 ENCODE Processing Pipeline e0482bbe6d31e3317b2ce16c4f30168d https://www.encodeproject.org/files/ENCFF947YAZ/@@download/ENCFF947YAZ.bed.gz hg19 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity experiment not submitted to GEO ENCFF377EEX bigBed narrowPeak peaks ENCSR519WMW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCC2-human ENCAB313DWJ DNA False 2017-12-04 ENCODE 3 ENCFF947YAZ 13149498 ENCODE Processing Pipeline 6ab02447264215f91c5c3e3bde1d8fb4 https://www.encodeproject.org/files/ENCFF377EEX/@@download/ENCFF377EEX.bigBed hg19 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity experiment not submitted to GEO ENCFF616NOQ bigWig signal p-value ENCSR519WMW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCC2-human ENCAB313DWJ DNA False 2017-12-04 ENCODE 3 ENCFF227IZS, ENCFF437HNK 1079585017 ENCODE Processing Pipeline 8f5a2afe6256d27f138d70ce86700a8d https://www.encodeproject.org/files/ENCFF616NOQ/@@download/ENCFF616NOQ.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity experiment not submitted to GEO ENCFF501IXT bam unfiltered alignments ENCSR519WMW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCC2-human ENCAB313DWJ DNA False 2017-12-04 ENCODE 1 100 ENCFF124VKG, ENCFF287GOE, ENCFF807MUK 4397849136 ENCODE Processing Pipeline 816772595996653474d70a85c332985f https://www.encodeproject.org/files/ENCFF501IXT/@@download/ENCFF501IXT.bam hg19 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity experiment not submitted to GEO ENCFF662JMK bam alignments ENCSR519WMW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCC2-human ENCAB313DWJ DNA False 2017-12-04 ENCODE 1 100 ENCFF124VKG, ENCFF287GOE, ENCFF807MUK 3287250564 ENCODE Processing Pipeline f25893f9733e70c041f0f9d867c71064 https://www.encodeproject.org/files/ENCFF662JMK/@@download/ENCFF662JMK.bam hg19 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity experiment not submitted to GEO ENCFF574BED bam unfiltered alignments ENCSR519WMW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCC2-human ENCAB313DWJ DNA False 2017-12-04 ENCODE 1 100 ENCFF124VKG, ENCFF287GOE, ENCFF643CGH 4399903618 ENCODE Processing Pipeline 46c23497b7a9ecb2c3cf875df3e038cd https://www.encodeproject.org/files/ENCFF574BED/@@download/ENCFF574BED.bam GRCh38 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity experiment not submitted to GEO ENCFF658CWZ bam alignments ENCSR519WMW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCC2-human ENCAB313DWJ DNA False 2017-12-04 ENCODE 1 100 ENCFF124VKG, ENCFF287GOE, ENCFF643CGH 3288635458 ENCODE Processing Pipeline f3908cbe6322bddd22c1245a942e597d https://www.encodeproject.org/files/ENCFF658CWZ/@@download/ENCFF658CWZ.bam GRCh38 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity experiment not submitted to GEO ENCFF699USV bigWig signal p-value ENCSR519WMW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCC2-human ENCAB313DWJ DNA False 2017-12-04 ENCODE 1, 3 ENCFF051LWI, ENCFF269TSX, ENCFF662JMK 1481427804 ENCODE Processing Pipeline 6a183ada23903b0f9e2c5b82af17847d https://www.encodeproject.org/files/ENCFF699USV/@@download/ENCFF699USV.bigWig hg19 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity experiment not submitted to GEO ENCFF810GGD bigWig fold change over control ENCSR519WMW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCC2-human ENCAB313DWJ DNA False 2017-12-04 ENCODE 1, 3 ENCFF051LWI, ENCFF269TSX, ENCFF662JMK 1488844095 ENCODE Processing Pipeline a4b62014f85b20f6f41156b4a12cf49e https://www.encodeproject.org/files/ENCFF810GGD/@@download/ENCFF810GGD.bigWig hg19 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity experiment not submitted to GEO ENCFF659TYY bigWig fold change over control ENCSR519WMW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCC2-human ENCAB313DWJ DNA False 2017-12-04 ENCODE 1 ENCFF051LWI, ENCFF662JMK 1025791698 ENCODE Processing Pipeline 61327320f4782e5235db989c547f547c https://www.encodeproject.org/files/ENCFF659TYY/@@download/ENCFF659TYY.bigWig hg19 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity experiment not submitted to GEO ENCFF114PTZ bed narrowPeak optimal idr thresholded peaks ENCSR519WMW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCC2-human ENCAB313DWJ DNA False 2017-12-04 ENCODE 1, 3 ENCFF001TDO, ENCFF036DTR, ENCFF620PQN, ENCFF947YAZ 353101 ENCODE Processing Pipeline bddebec1817eff40e35f0cfe74a9ff7a https://www.encodeproject.org/files/ENCFF114PTZ/@@download/ENCFF114PTZ.bed.gz hg19 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity experiment not submitted to GEO ENCFF620PQN bed narrowPeak peaks ENCSR519WMW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCC2-human ENCAB313DWJ DNA False 2017-12-04 ENCODE 1, 3 ENCFF051LWI, ENCFF269TSX, ENCFF662JMK 7206856 ENCODE Processing Pipeline 8c94e223846ea8a672e133d7817de491 https://www.encodeproject.org/files/ENCFF620PQN/@@download/ENCFF620PQN.bed.gz hg19 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity experiment not submitted to GEO ENCFF822DJR bigWig signal p-value ENCSR519WMW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCC2-human ENCAB313DWJ DNA False 2017-12-04 ENCODE 1 ENCFF051LWI, ENCFF662JMK 889256265 ENCODE Processing Pipeline 5b37336d352f108d2a33144b527be5ac https://www.encodeproject.org/files/ENCFF822DJR/@@download/ENCFF822DJR.bigWig hg19 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity experiment not submitted to GEO ENCFF036DTR bed narrowPeak peaks ENCSR519WMW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCC2-human ENCAB313DWJ DNA False 2017-12-04 ENCODE 1 ENCFF051LWI, ENCFF662JMK 6792553 ENCODE Processing Pipeline 87d188037f4f45022e2f4c6b2523115d https://www.encodeproject.org/files/ENCFF036DTR/@@download/ENCFF036DTR.bed.gz hg19 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity experiment not submitted to GEO ENCFF963UZS bigBed narrowPeak peaks ENCSR519WMW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCC2-human ENCAB313DWJ DNA False 2017-12-04 ENCODE 1 ENCFF036DTR 13178543 ENCODE Processing Pipeline 3a8f4afff73a3a0bc17f9c6b0295d3fe https://www.encodeproject.org/files/ENCFF963UZS/@@download/ENCFF963UZS.bigBed hg19 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity experiment not submitted to GEO ENCFF573RPZ bigBed narrowPeak peaks ENCSR519WMW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCC2-human ENCAB313DWJ DNA False 2017-12-04 ENCODE 1, 3 ENCFF620PQN 12902292 ENCODE Processing Pipeline 1376220b6fb6624ea49beaba20f166a2 https://www.encodeproject.org/files/ENCFF573RPZ/@@download/ENCFF573RPZ.bigBed hg19 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity experiment not submitted to GEO ENCFF287WLC bed narrowPeak conservative idr thresholded peaks ENCSR519WMW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCC2-human ENCAB313DWJ DNA False 2017-12-04 ENCODE 1, 3 ENCFF001TDO, ENCFF036DTR, ENCFF620PQN, ENCFF947YAZ 234475 ENCODE Processing Pipeline 9e73f646881fcf56186d9d1784c7933d https://www.encodeproject.org/files/ENCFF287WLC/@@download/ENCFF287WLC.bed.gz hg19 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity experiment not submitted to GEO ENCFF572NYX bigBed narrowPeak conservative idr thresholded peaks ENCSR519WMW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCC2-human ENCAB313DWJ DNA False 2017-12-04 ENCODE 1, 3 ENCFF287WLC 519710 ENCODE Processing Pipeline 7e0c948c19600decbfe3255e2d296007 https://www.encodeproject.org/files/ENCFF572NYX/@@download/ENCFF572NYX.bigBed hg19 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity experiment not submitted to GEO ENCFF681FBO bigBed narrowPeak optimal idr thresholded peaks ENCSR519WMW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCC2-human ENCAB313DWJ DNA False 2017-12-04 ENCODE 1, 3 ENCFF114PTZ 706190 ENCODE Processing Pipeline de0076fe3c480970458be6ca21e96cba https://www.encodeproject.org/files/ENCFF681FBO/@@download/ENCFF681FBO.bigBed hg19 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity experiment not submitted to GEO ENCFF423LQO bigBed narrowPeak peaks ENCSR519WMW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCC2-human ENCAB313DWJ DNA False 2017-12-04 ENCODE 1 ENCFF393SGT 13188358 ENCODE Processing Pipeline 5803b5dbc0d5cb9e4183a2e9b8aa1867 https://www.encodeproject.org/files/ENCFF423LQO/@@download/ENCFF423LQO.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity experiment not submitted to GEO ENCFF628SGN bigWig fold change over control ENCSR519WMW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCC2-human ENCAB313DWJ DNA False 2017-12-04 ENCODE 1 ENCFF227IZS, ENCFF658CWZ 1025177362 ENCODE Processing Pipeline 3e9ea39e2cf8dc0c1022a0f9eb9adc54 https://www.encodeproject.org/files/ENCFF628SGN/@@download/ENCFF628SGN.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity experiment not submitted to GEO ENCFF144OUG bigWig signal p-value ENCSR519WMW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCC2-human ENCAB313DWJ DNA False 2017-12-04 ENCODE 1 ENCFF227IZS, ENCFF658CWZ 889867232 ENCODE Processing Pipeline 0ed97205a0c294b2cb4e8a27bac44645 https://www.encodeproject.org/files/ENCFF144OUG/@@download/ENCFF144OUG.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity experiment not submitted to GEO ENCFF816XFH bigBed narrowPeak optimal idr thresholded peaks ENCSR519WMW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCC2-human ENCAB313DWJ DNA False 2017-12-04 ENCODE 1, 3 ENCFF751ZVX 700888 ENCODE Processing Pipeline ebc05de26e0102a1d0a96e4714c27d38 https://www.encodeproject.org/files/ENCFF816XFH/@@download/ENCFF816XFH.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity experiment not submitted to GEO ENCFF828MPS bigWig signal p-value ENCSR519WMW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCC2-human ENCAB313DWJ DNA False 2017-12-04 ENCODE 1, 3 ENCFF227IZS, ENCFF437HNK, ENCFF658CWZ 1483165230 ENCODE Processing Pipeline b401d648be642a6869a43d7b573ad0b1 https://www.encodeproject.org/files/ENCFF828MPS/@@download/ENCFF828MPS.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity experiment not submitted to GEO ENCFF014LYB bed narrowPeak peaks ENCSR519WMW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCC2-human ENCAB313DWJ DNA False 2017-12-04 ENCODE 3 ENCFF227IZS, ENCFF437HNK 6688390 ENCODE Processing Pipeline 201d3184f61b4c3f705c9fbcd106c49c https://www.encodeproject.org/files/ENCFF014LYB/@@download/ENCFF014LYB.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity experiment not submitted to GEO ENCFF726SVI bed narrowPeak peaks ENCSR519WMW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCC2-human ENCAB313DWJ DNA False 2017-12-04 ENCODE 1, 3 ENCFF227IZS, ENCFF437HNK, ENCFF658CWZ 7190388 ENCODE Processing Pipeline 8895af9d6cf9921dbb024698bde906af https://www.encodeproject.org/files/ENCFF726SVI/@@download/ENCFF726SVI.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity experiment not submitted to GEO ENCFF556QKN bigBed narrowPeak peaks ENCSR519WMW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCC2-human ENCAB313DWJ DNA False 2017-12-04 ENCODE 1, 3 ENCFF726SVI 12894656 ENCODE Processing Pipeline c855a89311559d75c4f94461aedfcea3 https://www.encodeproject.org/files/ENCFF556QKN/@@download/ENCFF556QKN.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity experiment not submitted to GEO ENCFF102TZK bed narrowPeak conservative idr thresholded peaks ENCSR519WMW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCC2-human ENCAB313DWJ DNA False 2017-12-04 ENCODE 1, 3 ENCFF014LYB, ENCFF393SGT, ENCFF419RSJ, ENCFF726SVI 229386 ENCODE Processing Pipeline 92663704eec70850fe9e806bd6275a89 https://www.encodeproject.org/files/ENCFF102TZK/@@download/ENCFF102TZK.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity experiment not submitted to GEO ENCFF053QSU bigWig fold change over control ENCSR519WMW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCC2-human ENCAB313DWJ DNA False 2017-12-04 ENCODE 1, 3 ENCFF227IZS, ENCFF437HNK, ENCFF658CWZ 1488671053 ENCODE Processing Pipeline 5bd0f5556724f0a1c4123659aec7416f https://www.encodeproject.org/files/ENCFF053QSU/@@download/ENCFF053QSU.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity experiment not submitted to GEO ENCFF393SGT bed narrowPeak peaks ENCSR519WMW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCC2-human ENCAB313DWJ DNA False 2017-12-04 ENCODE 1 ENCFF227IZS, ENCFF658CWZ 6783917 ENCODE Processing Pipeline 940ae1f343f6a8496cb3671448698305 https://www.encodeproject.org/files/ENCFF393SGT/@@download/ENCFF393SGT.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity experiment not submitted to GEO ENCFF763PFJ bigBed narrowPeak conservative idr thresholded peaks ENCSR519WMW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCC2-human ENCAB313DWJ DNA False 2017-12-04 ENCODE 1, 3 ENCFF102TZK 514528 ENCODE Processing Pipeline a7e46c18431d1368747a916e3289c525 https://www.encodeproject.org/files/ENCFF763PFJ/@@download/ENCFF763PFJ.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity experiment not submitted to GEO ENCFF751ZVX bed narrowPeak optimal idr thresholded peaks ENCSR519WMW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCC2-human ENCAB313DWJ DNA False 2017-12-04 ENCODE 1, 3 ENCFF014LYB, ENCFF393SGT, ENCFF419RSJ, ENCFF726SVI 347207 ENCODE Processing Pipeline 8ec18a0f82ff5880b51c2debe77a83d7 https://www.encodeproject.org/files/ENCFF751ZVX/@@download/ENCFF751ZVX.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity experiment not submitted to GEO ENCFF674QUX fastq reads ENCSR796ITY ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFIC-human ENCAB272JJF DNA False 2017-05-17 ENCODE 1 1 100 paired-ended 2 ENCFF384EGA 1964388359 Michael Snyder, Stanford bbcd6aac8e273d314d4f31ad082453f8 https://www.encodeproject.org/files/ENCFF674QUX/@@download/ENCFF674QUX.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFH/ archived inconsistent platforms, mild to moderate bottlenecking ENCFF439DZE fastq reads ENCSR796ITY ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFIC-human ENCAB272JJF DNA False 2017-05-17 ENCODE 2 1 100 paired-ended 1 ENCFF456ASW 4178843492 Michael Snyder, Stanford fe48a666c957eafc72a0a903c8fd3343 SRA:SRR6214402 https://www.encodeproject.org/files/ENCFF439DZE/@@download/ENCFF439DZE.fastq.gz Illumina HiSeq 4000 /files/ENCFF259GQA/ released inconsistent platforms, mild to moderate bottlenecking ENCFF384EGA fastq reads ENCSR796ITY ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFIC-human ENCAB272JJF DNA False 2017-05-17 ENCODE 1 1 100 paired-ended 1 ENCFF674QUX 1911627950 Michael Snyder, Stanford 752b29fd3e5433f26a8f9b7b0e888979 https://www.encodeproject.org/files/ENCFF384EGA/@@download/ENCFF384EGA.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFF/ archived inconsistent platforms, mild to moderate bottlenecking ENCFF456ASW fastq reads ENCSR796ITY ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFIC-human ENCAB272JJF DNA False 2017-05-17 ENCODE 2 1 100 paired-ended 2 ENCFF439DZE 4558822289 Michael Snyder, Stanford ef8957e2870e422c0074fa097e53309a SRA:SRR6214402 https://www.encodeproject.org/files/ENCFF456ASW/@@download/ENCFF456ASW.fastq.gz Illumina HiSeq 4000 /files/ENCFF837MIV/ released inconsistent platforms, mild to moderate bottlenecking ENCFF534ZOY fastq reads ENCSR796ITY ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFIC-human ENCAB272JJF DNA False 2017-05-17 ENCODE 1 1 100 paired-ended 1 ENCFF077ONG 4615312010 Michael Snyder, Stanford c140e239a48a9866ceeeab2eb9c54558 SRA:SRR6214401 https://www.encodeproject.org/files/ENCFF534ZOY/@@download/ENCFF534ZOY.fastq.gz Illumina HiSeq 4000 /files/ENCFF498JMO/ released inconsistent platforms, mild to moderate bottlenecking ENCFF077ONG fastq reads ENCSR796ITY ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFIC-human ENCAB272JJF DNA False 2017-05-17 ENCODE 1 1 100 paired-ended 2 ENCFF534ZOY 4776637410 Michael Snyder, Stanford 738b3a2ce82e55140683b32fb26e2e2e SRA:SRR6214401 https://www.encodeproject.org/files/ENCFF077ONG/@@download/ENCFF077ONG.fastq.gz Illumina HiSeq 4000 /files/ENCFF502GTS/ released inconsistent platforms, mild to moderate bottlenecking ENCFF753EXC bam unfiltered alignments ENCSR796ITY ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFIC-human ENCAB272JJF DNA False 2017-05-17 ENCODE 2 100 ENCFF439DZE, ENCFF456ASW, ENCFF643CGH 7878571169 ENCODE Processing Pipeline d9b8d2e4c2e6cb2a7a9b5441fb973316 https://www.encodeproject.org/files/ENCFF753EXC/@@download/ENCFF753EXC.bam GRCh38 released inconsistent platforms, mild to moderate bottlenecking ENCFF212AKE bam unfiltered alignments ENCSR796ITY ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFIC-human ENCAB272JJF DNA False 2017-05-17 ENCODE 1 100 ENCFF077ONG, ENCFF534ZOY, ENCFF643CGH 8179518209 ENCODE Processing Pipeline 7f8378b2b61d51dad10b3ee39ad9448c https://www.encodeproject.org/files/ENCFF212AKE/@@download/ENCFF212AKE.bam GRCh38 released inconsistent platforms, mild to moderate bottlenecking ENCFF059AYM bam alignments ENCSR796ITY ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFIC-human ENCAB272JJF DNA False 2017-05-17 ENCODE 2 100 ENCFF439DZE, ENCFF456ASW, ENCFF643CGH 6049847380 ENCODE Processing Pipeline 4337146fcc2e400a5e372efcd5b63d05 https://www.encodeproject.org/files/ENCFF059AYM/@@download/ENCFF059AYM.bam GRCh38 released inconsistent platforms, mild to moderate bottlenecking ENCFF272DYC bam alignments ENCSR796ITY ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFIC-human ENCAB272JJF DNA False 2017-05-17 ENCODE 1 100 ENCFF077ONG, ENCFF534ZOY, ENCFF643CGH 6570215360 ENCODE Processing Pipeline 2d7b758fd2df7431b2e8a35364dec584 https://www.encodeproject.org/files/ENCFF272DYC/@@download/ENCFF272DYC.bam GRCh38 released inconsistent platforms, mild to moderate bottlenecking ENCFF666QTO bigWig signal p-value ENCSR796ITY ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFIC-human ENCAB272JJF DNA False 2017-05-17 ENCODE 1 ENCFF272DYC, ENCFF712WXB, ENCFF790TAN 2102465732 ENCODE Processing Pipeline d7ac168a84bd7942066813f515644a07 https://www.encodeproject.org/files/ENCFF666QTO/@@download/ENCFF666QTO.bigWig GRCh38 released inconsistent platforms, mild to moderate bottlenecking ENCFF751NIG bigWig signal p-value ENCSR796ITY ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFIC-human ENCAB272JJF DNA False 2017-05-17 ENCODE 1, 2 ENCFF059AYM, ENCFF272DYC, ENCFF712WXB, ENCFF790TAN 2379512931 ENCODE Processing Pipeline 7e341f9ef1d123709f0dbd09194c00ca https://www.encodeproject.org/files/ENCFF751NIG/@@download/ENCFF751NIG.bigWig GRCh38 released inconsistent platforms, mild to moderate bottlenecking ENCFF327WBZ bigWig fold change over control ENCSR796ITY ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFIC-human ENCAB272JJF DNA False 2017-05-17 ENCODE 1 ENCFF272DYC, ENCFF712WXB, ENCFF790TAN 2312227102 ENCODE Processing Pipeline 762ae4ce845b3d7ca3d3e192b268257e https://www.encodeproject.org/files/ENCFF327WBZ/@@download/ENCFF327WBZ.bigWig GRCh38 released inconsistent platforms, mild to moderate bottlenecking ENCFF906PBS bigWig signal p-value ENCSR796ITY ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFIC-human ENCAB272JJF DNA False 2017-05-17 ENCODE 2 ENCFF059AYM, ENCFF712WXB 1538694505 ENCODE Processing Pipeline dc971b8a8efec787f6a06ae5317add40 https://www.encodeproject.org/files/ENCFF906PBS/@@download/ENCFF906PBS.bigWig GRCh38 released inconsistent platforms, mild to moderate bottlenecking ENCFF964NQM bigWig fold change over control ENCSR796ITY ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFIC-human ENCAB272JJF DNA False 2017-05-17 ENCODE 2 ENCFF059AYM, ENCFF712WXB 1810212701 ENCODE Processing Pipeline e3f21b07b1e10c6ddd925a5fe2d8185f https://www.encodeproject.org/files/ENCFF964NQM/@@download/ENCFF964NQM.bigWig GRCh38 released inconsistent platforms, mild to moderate bottlenecking ENCFF031VXJ bed narrowPeak peaks ENCSR796ITY ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFIC-human ENCAB272JJF DNA False 2017-05-17 ENCODE 1 ENCFF272DYC, ENCFF712WXB, ENCFF790TAN 7263292 ENCODE Processing Pipeline d1bdc5d490ce703dfa9de0a157634557 https://www.encodeproject.org/files/ENCFF031VXJ/@@download/ENCFF031VXJ.bed.gz GRCh38 released inconsistent platforms, mild to moderate bottlenecking ENCFF630OGT bigWig fold change over control ENCSR796ITY ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFIC-human ENCAB272JJF DNA False 2017-05-17 ENCODE 1, 2 ENCFF059AYM, ENCFF272DYC, ENCFF712WXB, ENCFF790TAN 4073499080 ENCODE Processing Pipeline 21eaaa0e47371653f4b7c95b33f07a7f https://www.encodeproject.org/files/ENCFF630OGT/@@download/ENCFF630OGT.bigWig GRCh38 released inconsistent platforms, mild to moderate bottlenecking ENCFF654XFG bed narrowPeak peaks ENCSR796ITY ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFIC-human ENCAB272JJF DNA False 2017-05-17 ENCODE 1, 2 ENCFF059AYM, ENCFF272DYC, ENCFF712WXB, ENCFF790TAN 7305530 ENCODE Processing Pipeline 24169255eb1bd2e283828e56dbde1ad2 https://www.encodeproject.org/files/ENCFF654XFG/@@download/ENCFF654XFG.bed.gz GRCh38 released inconsistent platforms, mild to moderate bottlenecking ENCFF485LQW bigBed narrowPeak peaks ENCSR796ITY ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFIC-human ENCAB272JJF DNA False 2017-05-17 ENCODE 1, 2 ENCFF654XFG 13616035 ENCODE Processing Pipeline ff2e124b817949a7cbf60cbce7906604 https://www.encodeproject.org/files/ENCFF485LQW/@@download/ENCFF485LQW.bigBed GRCh38 released inconsistent platforms, mild to moderate bottlenecking ENCFF510BZJ bigBed narrowPeak conservative idr thresholded peaks ENCSR796ITY ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFIC-human ENCAB272JJF DNA False 2017-05-17 ENCODE 1, 2 ENCFF132TXF 1708709 ENCODE Processing Pipeline 4f2cbfe32f872410d2811a85b767b32a https://www.encodeproject.org/files/ENCFF510BZJ/@@download/ENCFF510BZJ.bigBed GRCh38 released inconsistent platforms, mild to moderate bottlenecking ENCFF241DCR bigBed narrowPeak optimal idr thresholded peaks ENCSR796ITY ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFIC-human ENCAB272JJF DNA False 2017-05-17 ENCODE 1, 2 ENCFF092TVM 1753119 ENCODE Processing Pipeline d7c019f17899f38f0506a60bc7420d3a https://www.encodeproject.org/files/ENCFF241DCR/@@download/ENCFF241DCR.bigBed GRCh38 released inconsistent platforms, mild to moderate bottlenecking ENCFF981FUV bed narrowPeak peaks ENCSR796ITY ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFIC-human ENCAB272JJF DNA False 2017-05-17 ENCODE 2 ENCFF059AYM, ENCFF712WXB 7228242 ENCODE Processing Pipeline ed52d70ebbde88f412f5b8f450323df3 https://www.encodeproject.org/files/ENCFF981FUV/@@download/ENCFF981FUV.bed.gz GRCh38 released inconsistent platforms, mild to moderate bottlenecking ENCFF340DRC bigBed narrowPeak peaks ENCSR796ITY ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFIC-human ENCAB272JJF DNA False 2017-05-17 ENCODE 1 ENCFF031VXJ 13521854 ENCODE Processing Pipeline 64f4ffb76bc4f3c63d539d92f60474d4 https://www.encodeproject.org/files/ENCFF340DRC/@@download/ENCFF340DRC.bigBed GRCh38 released inconsistent platforms, mild to moderate bottlenecking ENCFF092TVM bed narrowPeak optimal idr thresholded peaks ENCSR796ITY ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFIC-human ENCAB272JJF DNA False 2017-05-17 ENCODE 1, 2 ENCFF031VXJ, ENCFF419RSJ, ENCFF654XFG, ENCFF981FUV 878508 ENCODE Processing Pipeline 755fcf39e0513f266110edb9abe198a7 https://www.encodeproject.org/files/ENCFF092TVM/@@download/ENCFF092TVM.bed.gz GRCh38 released inconsistent platforms, mild to moderate bottlenecking ENCFF848BPH bigBed narrowPeak peaks ENCSR796ITY ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFIC-human ENCAB272JJF DNA False 2017-05-17 ENCODE 2 ENCFF981FUV 13484100 ENCODE Processing Pipeline d3b6d716198b6151cee46d254c14e3a1 https://www.encodeproject.org/files/ENCFF848BPH/@@download/ENCFF848BPH.bigBed GRCh38 released inconsistent platforms, mild to moderate bottlenecking ENCFF132TXF bed narrowPeak conservative idr thresholded peaks ENCSR796ITY ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFIC-human ENCAB272JJF DNA False 2017-05-17 ENCODE 1, 2 ENCFF031VXJ, ENCFF419RSJ, ENCFF654XFG, ENCFF981FUV 859248 ENCODE Processing Pipeline 358dace8ca2c640240859ceca2c46c93 https://www.encodeproject.org/files/ENCFF132TXF/@@download/ENCFF132TXF.bed.gz GRCh38 released inconsistent platforms, mild to moderate bottlenecking ENCFF042TGG bam unfiltered alignments ENCSR796ITY ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFIC-human ENCAB272JJF DNA False 2017-05-17 ENCODE 2 100 ENCFF439DZE, ENCFF456ASW, ENCFF807MUK 7873307965 ENCODE Processing Pipeline d375dbfdacec491f1760ec25faa349e0 https://www.encodeproject.org/files/ENCFF042TGG/@@download/ENCFF042TGG.bam hg19 released inconsistent platforms, mild to moderate bottlenecking ENCFF198HNS bam unfiltered alignments ENCSR796ITY ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFIC-human ENCAB272JJF DNA False 2017-05-17 ENCODE 1 100 ENCFF077ONG, ENCFF534ZOY, ENCFF807MUK 8175213433 ENCODE Processing Pipeline de202e06675c09c59dd4b970ea6bb51f https://www.encodeproject.org/files/ENCFF198HNS/@@download/ENCFF198HNS.bam hg19 released inconsistent platforms, mild to moderate bottlenecking ENCFF822VWX bam alignments ENCSR796ITY ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFIC-human ENCAB272JJF DNA False 2017-05-17 ENCODE 1 100 ENCFF077ONG, ENCFF534ZOY, ENCFF807MUK 6564647407 ENCODE Processing Pipeline ae9670144d9b059741ae2c603efefaf4 https://www.encodeproject.org/files/ENCFF822VWX/@@download/ENCFF822VWX.bam hg19 released inconsistent platforms, mild to moderate bottlenecking ENCFF753LGT bam alignments ENCSR796ITY ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFIC-human ENCAB272JJF DNA False 2017-05-17 ENCODE 2 100 ENCFF439DZE, ENCFF456ASW, ENCFF807MUK 6045758828 ENCODE Processing Pipeline c687fa85d13cd3c7ff3cb34812e582ea https://www.encodeproject.org/files/ENCFF753LGT/@@download/ENCFF753LGT.bam hg19 released inconsistent platforms, mild to moderate bottlenecking ENCFF533CFJ bigWig signal p-value ENCSR796ITY ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFIC-human ENCAB272JJF DNA False 2017-05-17 ENCODE 1 ENCFF160VXC, ENCFF822VWX, ENCFF834TUP 2209426966 ENCODE Processing Pipeline d265b6b1dc24c16f38ff4abf53f662b3 https://www.encodeproject.org/files/ENCFF533CFJ/@@download/ENCFF533CFJ.bigWig hg19 released inconsistent platforms, mild to moderate bottlenecking ENCFF124BLC bigWig signal p-value ENCSR796ITY ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFIC-human ENCAB272JJF DNA False 2017-05-17 ENCODE 2 ENCFF753LGT, ENCFF834TUP 1541945908 ENCODE Processing Pipeline 8e0d65d2bc1ba1f2ed31f7bfc03088fa https://www.encodeproject.org/files/ENCFF124BLC/@@download/ENCFF124BLC.bigWig hg19 released inconsistent platforms, mild to moderate bottlenecking ENCFF164UUU bigWig fold change over control ENCSR796ITY ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFIC-human ENCAB272JJF DNA False 2017-05-17 ENCODE 1 ENCFF160VXC, ENCFF822VWX, ENCFF834TUP 2277864175 ENCODE Processing Pipeline 87940451aaa1fb47d2e933c9d69b28f7 https://www.encodeproject.org/files/ENCFF164UUU/@@download/ENCFF164UUU.bigWig hg19 released inconsistent platforms, mild to moderate bottlenecking ENCFF292SNP bed narrowPeak peaks ENCSR796ITY ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFIC-human ENCAB272JJF DNA False 2017-05-17 ENCODE 2 ENCFF753LGT, ENCFF834TUP 7252193 ENCODE Processing Pipeline e75f3e53f1fb259d8bc04167166d255b https://www.encodeproject.org/files/ENCFF292SNP/@@download/ENCFF292SNP.bed.gz hg19 released inconsistent platforms, mild to moderate bottlenecking ENCFF034XOR bigWig signal p-value ENCSR796ITY ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFIC-human ENCAB272JJF DNA False 2017-05-17 ENCODE 1, 2 ENCFF160VXC, ENCFF753LGT, ENCFF822VWX, ENCFF834TUP 2367289060 ENCODE Processing Pipeline 57e8ea61147acb3b9c7bc92237f11539 https://www.encodeproject.org/files/ENCFF034XOR/@@download/ENCFF034XOR.bigWig hg19 released inconsistent platforms, mild to moderate bottlenecking ENCFF625QNJ bigWig fold change over control ENCSR796ITY ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFIC-human ENCAB272JJF DNA False 2017-05-17 ENCODE 2 ENCFF753LGT, ENCFF834TUP 1808232930 ENCODE Processing Pipeline 62db91c156cbbeadce3f8811ee5e1db0 https://www.encodeproject.org/files/ENCFF625QNJ/@@download/ENCFF625QNJ.bigWig hg19 released inconsistent platforms, mild to moderate bottlenecking ENCFF072WWL bed narrowPeak conservative idr thresholded peaks ENCSR796ITY ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFIC-human ENCAB272JJF DNA False 2017-05-17 ENCODE 1, 2 ENCFF001TDO, ENCFF292SNP, ENCFF351DKB, ENCFF754CMK 855707 ENCODE Processing Pipeline 5e181fde622ec273b1a5685c383e368e https://www.encodeproject.org/files/ENCFF072WWL/@@download/ENCFF072WWL.bed.gz hg19 released inconsistent platforms, mild to moderate bottlenecking ENCFF351DKB bed narrowPeak peaks ENCSR796ITY ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFIC-human ENCAB272JJF DNA False 2017-05-17 ENCODE 1 ENCFF160VXC, ENCFF822VWX, ENCFF834TUP 7258939 ENCODE Processing Pipeline 96bc24b8a37c141356d2d757d60d26ec https://www.encodeproject.org/files/ENCFF351DKB/@@download/ENCFF351DKB.bed.gz hg19 released inconsistent platforms, mild to moderate bottlenecking ENCFF370ENX bed narrowPeak optimal idr thresholded peaks ENCSR796ITY ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFIC-human ENCAB272JJF DNA False 2017-05-17 ENCODE 1, 2 ENCFF001TDO, ENCFF292SNP, ENCFF351DKB, ENCFF754CMK 878417 ENCODE Processing Pipeline c5c8948cb0e3434da4fa620f09ef9812 https://www.encodeproject.org/files/ENCFF370ENX/@@download/ENCFF370ENX.bed.gz hg19 released inconsistent platforms, mild to moderate bottlenecking ENCFF285OCI bigBed narrowPeak optimal idr thresholded peaks ENCSR796ITY ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFIC-human ENCAB272JJF DNA False 2017-05-17 ENCODE 1, 2 ENCFF370ENX 1746388 ENCODE Processing Pipeline 88b3e04cb54e3913f3ed6d05dc9e4ca5 https://www.encodeproject.org/files/ENCFF285OCI/@@download/ENCFF285OCI.bigBed hg19 released inconsistent platforms, mild to moderate bottlenecking ENCFF474SAL bigWig fold change over control ENCSR796ITY ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFIC-human ENCAB272JJF DNA False 2017-05-17 ENCODE 1, 2 ENCFF160VXC, ENCFF753LGT, ENCFF822VWX, ENCFF834TUP 4047090936 ENCODE Processing Pipeline e0c9d0da9f78cb55e31a01bdadccc464 https://www.encodeproject.org/files/ENCFF474SAL/@@download/ENCFF474SAL.bigWig hg19 released inconsistent platforms, mild to moderate bottlenecking ENCFF393VLZ bigBed narrowPeak peaks ENCSR796ITY ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFIC-human ENCAB272JJF DNA False 2017-05-17 ENCODE 1, 2 ENCFF754CMK 13603456 ENCODE Processing Pipeline 3ebd700d1d4d5dafbea66dc4fb1977c9 https://www.encodeproject.org/files/ENCFF393VLZ/@@download/ENCFF393VLZ.bigBed hg19 released inconsistent platforms, mild to moderate bottlenecking ENCFF232EYF bigBed narrowPeak peaks ENCSR796ITY ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFIC-human ENCAB272JJF DNA False 2017-05-17 ENCODE 1 ENCFF351DKB 13508844 ENCODE Processing Pipeline 591f128ca61cdc0996cb4d4ba6ee4896 https://www.encodeproject.org/files/ENCFF232EYF/@@download/ENCFF232EYF.bigBed hg19 released inconsistent platforms, mild to moderate bottlenecking ENCFF292MFU bigBed narrowPeak conservative idr thresholded peaks ENCSR796ITY ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFIC-human ENCAB272JJF DNA False 2017-05-17 ENCODE 1, 2 ENCFF072WWL 1701239 ENCODE Processing Pipeline 1fc8f0b461eba03d7dfbac90132ab723 https://www.encodeproject.org/files/ENCFF292MFU/@@download/ENCFF292MFU.bigBed hg19 released inconsistent platforms, mild to moderate bottlenecking ENCFF754CMK bed narrowPeak peaks ENCSR796ITY ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFIC-human ENCAB272JJF DNA False 2017-05-17 ENCODE 1, 2 ENCFF160VXC, ENCFF753LGT, ENCFF822VWX, ENCFF834TUP 7301117 ENCODE Processing Pipeline 6f2bd3fb9c8d0f1fe300daa205cb1e3f https://www.encodeproject.org/files/ENCFF754CMK/@@download/ENCFF754CMK.bed.gz hg19 released inconsistent platforms, mild to moderate bottlenecking ENCFF496MEB bigBed narrowPeak peaks ENCSR796ITY ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFIC-human ENCAB272JJF DNA False 2017-05-17 ENCODE 2 ENCFF292SNP 13510173 ENCODE Processing Pipeline e3cdb9e1c842061f1fd1eca34afd7dac https://www.encodeproject.org/files/ENCFF496MEB/@@download/ENCFF496MEB.bigBed hg19 released inconsistent platforms, mild to moderate bottlenecking ENCFF079IZF fastq reads ENCSR791OZM ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM25-human ENCAB401CSY DNA SDS formaldehyde False 2018-01-18 ENCODE 1 1 40 single-ended 422824614 Xiang-Dong Fu, UCSD f4c256ca8cbfdbd508ff8ff8e67b5003 https://www.encodeproject.org/files/ENCFF079IZF/@@download/ENCFF079IZF.fastq.gz Illumina HiSeq 2500 /files/ENCFF577LLL/ released low read depth, low read length, moderate library complexity experiment not submitted to GEO severe bottlenecking ENCFF800WHJ fastq reads ENCSR791OZM ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM25-human ENCAB401CSY DNA SDS formaldehyde False 2018-01-18 ENCODE 2 1 40 single-ended 452112481 Xiang-Dong Fu, UCSD c58d3e9d97b570e80c812121d20b394c https://www.encodeproject.org/files/ENCFF800WHJ/@@download/ENCFF800WHJ.fastq.gz Illumina HiSeq 2000 /files/ENCFF363JFD/ released low read depth, low read length, moderate library complexity experiment not submitted to GEO severe bottlenecking ENCFF562ZMN fastq reads ENCSR791OZM ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM25-human ENCAB401CSY DNA SDS formaldehyde False 2018-01-18 ENCODE 1 1 40 single-ended 788771086 Xiang-Dong Fu, UCSD 6954c3e192e855a3a1abe0d4762511d8 https://www.encodeproject.org/files/ENCFF562ZMN/@@download/ENCFF562ZMN.fastq.gz Illumina HiSeq 2500 /files/ENCFF577LLL/ released low read depth, low read length, moderate library complexity experiment not submitted to GEO severe bottlenecking ENCFF752TPO fastq reads ENCSR791OZM ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM25-human ENCAB401CSY DNA SDS formaldehyde False 2018-01-18 ENCODE 2 1 40 single-ended 789116336 Xiang-Dong Fu, UCSD 7a2cb1f5159da4697e8af0aa98a4ca68 https://www.encodeproject.org/files/ENCFF752TPO/@@download/ENCFF752TPO.fastq.gz Illumina HiSeq 2500 /files/ENCFF363JFD/ released low read depth, low read length, moderate library complexity experiment not submitted to GEO severe bottlenecking ENCFF180WYS bam alignments ENCSR791OZM ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM25-human ENCAB401CSY DNA SDS formaldehyde False 2018-01-18 ENCODE 2 40 ENCFF752TPO, ENCFF800WHJ, ENCFF807MUK 607333013 ENCODE Processing Pipeline 97c7386fb6c8aea10907d8d8ac1e44dd https://www.encodeproject.org/files/ENCFF180WYS/@@download/ENCFF180WYS.bam hg19 released low read depth, low read length, moderate library complexity experiment not submitted to GEO severe bottlenecking ENCFF214QGI bam alignments ENCSR791OZM ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM25-human ENCAB401CSY DNA SDS formaldehyde False 2018-01-18 ENCODE 1 40 ENCFF079IZF, ENCFF562ZMN, ENCFF807MUK 666709848 ENCODE Processing Pipeline b937bc05097341abb01e5c83960e4464 https://www.encodeproject.org/files/ENCFF214QGI/@@download/ENCFF214QGI.bam hg19 released low read depth, low read length, moderate library complexity experiment not submitted to GEO severe bottlenecking ENCFF673CKZ bam unfiltered alignments ENCSR791OZM ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM25-human ENCAB401CSY DNA SDS formaldehyde False 2018-01-18 ENCODE 2 40 ENCFF752TPO, ENCFF800WHJ, ENCFF807MUK 1236889719 ENCODE Processing Pipeline 83eb72f1c096c1d5439a3a4d9c2d3ac2 https://www.encodeproject.org/files/ENCFF673CKZ/@@download/ENCFF673CKZ.bam hg19 released low read depth, low read length, moderate library complexity experiment not submitted to GEO severe bottlenecking ENCFF998LKC bam alignments ENCSR791OZM ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM25-human ENCAB401CSY DNA SDS formaldehyde False 2018-01-18 ENCODE 2 40 ENCFF643CGH, ENCFF752TPO, ENCFF800WHJ 606847527 ENCODE Processing Pipeline 1ccfb6f2d2eac849524b4ff43a409d8c https://www.encodeproject.org/files/ENCFF998LKC/@@download/ENCFF998LKC.bam GRCh38 released low read depth, low read length, moderate library complexity experiment not submitted to GEO severe bottlenecking ENCFF104JRH bam unfiltered alignments ENCSR791OZM ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM25-human ENCAB401CSY DNA SDS formaldehyde False 2018-01-18 ENCODE 1 40 ENCFF079IZF, ENCFF562ZMN, ENCFF643CGH 1246793869 ENCODE Processing Pipeline d0bec3cd6cb8c4fa2947ea97bd17c0d0 https://www.encodeproject.org/files/ENCFF104JRH/@@download/ENCFF104JRH.bam GRCh38 released low read depth, low read length, moderate library complexity experiment not submitted to GEO severe bottlenecking ENCFF609FFL bam alignments ENCSR791OZM ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM25-human ENCAB401CSY DNA SDS formaldehyde False 2018-01-18 ENCODE 1 40 ENCFF079IZF, ENCFF562ZMN, ENCFF643CGH 666187611 ENCODE Processing Pipeline c70b41ad628430b2c1c561a47a959829 https://www.encodeproject.org/files/ENCFF609FFL/@@download/ENCFF609FFL.bam GRCh38 released low read depth, low read length, moderate library complexity experiment not submitted to GEO severe bottlenecking ENCFF068IHC bam unfiltered alignments ENCSR791OZM ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM25-human ENCAB401CSY DNA SDS formaldehyde False 2018-01-18 ENCODE 2 40 ENCFF643CGH, ENCFF752TPO, ENCFF800WHJ 1242722710 ENCODE Processing Pipeline bb57651755b326b321e5424c2533f66a https://www.encodeproject.org/files/ENCFF068IHC/@@download/ENCFF068IHC.bam GRCh38 released low read depth, low read length, moderate library complexity experiment not submitted to GEO severe bottlenecking ENCFF479WQQ bam unfiltered alignments ENCSR791OZM ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM25-human ENCAB401CSY DNA SDS formaldehyde False 2018-01-18 ENCODE 1 40 ENCFF079IZF, ENCFF562ZMN, ENCFF807MUK 1240637391 ENCODE Processing Pipeline 39df0af1201a7725c205f6f9c54a9a41 https://www.encodeproject.org/files/ENCFF479WQQ/@@download/ENCFF479WQQ.bam hg19 released low read depth, low read length, moderate library complexity experiment not submitted to GEO severe bottlenecking ENCFF970GFH bed narrowPeak peaks ENCSR791OZM ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM25-human ENCAB401CSY DNA SDS formaldehyde False 2018-01-18 ENCODE 2 ENCFF906SAI, ENCFF998LKC 5819030 ENCODE Processing Pipeline b7a9f69287a325b8ae0b63b554502043 https://www.encodeproject.org/files/ENCFF970GFH/@@download/ENCFF970GFH.bed.gz GRCh38 released low read depth, low read length, moderate library complexity experiment not submitted to GEO severe bottlenecking ENCFF920XYR bigBed narrowPeak peaks ENCSR791OZM ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM25-human ENCAB401CSY DNA SDS formaldehyde False 2018-01-18 ENCODE 1, 2 ENCFF562TIU 13928708 ENCODE Processing Pipeline 0e6edad58731c4547165bbdac747ce19 https://www.encodeproject.org/files/ENCFF920XYR/@@download/ENCFF920XYR.bigBed GRCh38 released low read depth, low read length, moderate library complexity experiment not submitted to GEO severe bottlenecking ENCFF372LNZ bed narrowPeak conservative idr thresholded peaks ENCSR791OZM ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM25-human ENCAB401CSY DNA SDS formaldehyde False 2018-01-18 ENCODE 1, 2 ENCFF419RSJ, ENCFF562TIU, ENCFF786GFI, ENCFF970GFH 820705 ENCODE Processing Pipeline b5b23d014ed9a83d56960da02e9fb4e4 https://www.encodeproject.org/files/ENCFF372LNZ/@@download/ENCFF372LNZ.bed.gz GRCh38 released low read depth, low read length, moderate library complexity experiment not submitted to GEO severe bottlenecking ENCFF818ZFX bigWig signal p-value ENCSR791OZM ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM25-human ENCAB401CSY DNA SDS formaldehyde False 2018-01-18 ENCODE 1, 2 ENCFF120YSP, ENCFF609FFL, ENCFF906SAI, ENCFF998LKC 1322798448 ENCODE Processing Pipeline 3fefba192df83abeb6b90fc2016f2606 https://www.encodeproject.org/files/ENCFF818ZFX/@@download/ENCFF818ZFX.bigWig GRCh38 released low read depth, low read length, moderate library complexity experiment not submitted to GEO severe bottlenecking ENCFF031ANY bigBed narrowPeak peaks ENCSR791OZM ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM25-human ENCAB401CSY DNA SDS formaldehyde False 2018-01-18 ENCODE 1 ENCFF786GFI 11370436 ENCODE Processing Pipeline 479ca04181aa721731ddd177443f67d8 https://www.encodeproject.org/files/ENCFF031ANY/@@download/ENCFF031ANY.bigBed GRCh38 released low read depth, low read length, moderate library complexity experiment not submitted to GEO severe bottlenecking ENCFF102XVH bed narrowPeak optimal idr thresholded peaks ENCSR791OZM ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM25-human ENCAB401CSY DNA SDS formaldehyde False 2018-01-18 ENCODE 1, 2 ENCFF419RSJ, ENCFF562TIU, ENCFF786GFI, ENCFF970GFH 840966 ENCODE Processing Pipeline 1763fe71aba2362d84740a7d4b259bf3 https://www.encodeproject.org/files/ENCFF102XVH/@@download/ENCFF102XVH.bed.gz GRCh38 released low read depth, low read length, moderate library complexity experiment not submitted to GEO severe bottlenecking ENCFF113JKF bigWig signal p-value ENCSR791OZM ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM25-human ENCAB401CSY DNA SDS formaldehyde False 2018-01-18 ENCODE 1 ENCFF120YSP, ENCFF609FFL 703644125 ENCODE Processing Pipeline 209c02ffd65a32fbe46f81ab3944a4c1 https://www.encodeproject.org/files/ENCFF113JKF/@@download/ENCFF113JKF.bigWig GRCh38 released low read depth, low read length, moderate library complexity experiment not submitted to GEO severe bottlenecking ENCFF248CGR bigBed narrowPeak optimal idr thresholded peaks ENCSR791OZM ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM25-human ENCAB401CSY DNA SDS formaldehyde False 2018-01-18 ENCODE 1, 2 ENCFF102XVH 1665737 ENCODE Processing Pipeline bc32cd7490b4f5a7aa52379d7418669d https://www.encodeproject.org/files/ENCFF248CGR/@@download/ENCFF248CGR.bigBed GRCh38 released low read depth, low read length, moderate library complexity experiment not submitted to GEO severe bottlenecking ENCFF492QXQ bigWig fold change over control ENCSR791OZM ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM25-human ENCAB401CSY DNA SDS formaldehyde False 2018-01-18 ENCODE 2 ENCFF906SAI, ENCFF998LKC 499427535 ENCODE Processing Pipeline 7e9cfcdf154233b32a1f912b0afef287 https://www.encodeproject.org/files/ENCFF492QXQ/@@download/ENCFF492QXQ.bigWig GRCh38 released low read depth, low read length, moderate library complexity experiment not submitted to GEO severe bottlenecking ENCFF562TIU bed narrowPeak peaks ENCSR791OZM ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM25-human ENCAB401CSY DNA SDS formaldehyde False 2018-01-18 ENCODE 1, 2 ENCFF120YSP, ENCFF609FFL, ENCFF906SAI, ENCFF998LKC 6788586 ENCODE Processing Pipeline 3a763387afa7efa121bf5c58ccf5806b https://www.encodeproject.org/files/ENCFF562TIU/@@download/ENCFF562TIU.bed.gz GRCh38 released low read depth, low read length, moderate library complexity experiment not submitted to GEO severe bottlenecking ENCFF586HOB bigWig fold change over control ENCSR791OZM ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM25-human ENCAB401CSY DNA SDS formaldehyde False 2018-01-18 ENCODE 1 ENCFF120YSP, ENCFF609FFL 492934974 ENCODE Processing Pipeline 539741620c32641ea84bc6e4cc0ccdc3 https://www.encodeproject.org/files/ENCFF586HOB/@@download/ENCFF586HOB.bigWig GRCh38 released low read depth, low read length, moderate library complexity experiment not submitted to GEO severe bottlenecking ENCFF011DOM bigWig signal p-value ENCSR791OZM ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM25-human ENCAB401CSY DNA SDS formaldehyde False 2018-01-18 ENCODE 2 ENCFF906SAI, ENCFF998LKC 738784343 ENCODE Processing Pipeline 869f74995bc0e1a65a699b6816ba240c https://www.encodeproject.org/files/ENCFF011DOM/@@download/ENCFF011DOM.bigWig GRCh38 released low read depth, low read length, moderate library complexity experiment not submitted to GEO severe bottlenecking ENCFF786GFI bed narrowPeak peaks ENCSR791OZM ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM25-human ENCAB401CSY DNA SDS formaldehyde False 2018-01-18 ENCODE 1 ENCFF120YSP, ENCFF609FFL 5693616 ENCODE Processing Pipeline 715038a5a944ed590040f3580caaa8d3 https://www.encodeproject.org/files/ENCFF786GFI/@@download/ENCFF786GFI.bed.gz GRCh38 released low read depth, low read length, moderate library complexity experiment not submitted to GEO severe bottlenecking ENCFF769FPU bigBed narrowPeak peaks ENCSR791OZM ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM25-human ENCAB401CSY DNA SDS formaldehyde False 2018-01-18 ENCODE 2 ENCFF970GFH 11410316 ENCODE Processing Pipeline c21726180e5d1ff1b1d0440e375d3fc5 https://www.encodeproject.org/files/ENCFF769FPU/@@download/ENCFF769FPU.bigBed GRCh38 released low read depth, low read length, moderate library complexity experiment not submitted to GEO severe bottlenecking ENCFF788PVG bigBed narrowPeak conservative idr thresholded peaks ENCSR791OZM ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM25-human ENCAB401CSY DNA SDS formaldehyde False 2018-01-18 ENCODE 1, 2 ENCFF372LNZ 1634336 ENCODE Processing Pipeline 4305f9ea8a862a2727e3c135ef9af585 https://www.encodeproject.org/files/ENCFF788PVG/@@download/ENCFF788PVG.bigBed GRCh38 released low read depth, low read length, moderate library complexity experiment not submitted to GEO severe bottlenecking ENCFF218VKE bigWig fold change over control ENCSR791OZM ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM25-human ENCAB401CSY DNA SDS formaldehyde False 2018-01-18 ENCODE 1, 2 ENCFF120YSP, ENCFF609FFL, ENCFF906SAI, ENCFF998LKC 1091896199 ENCODE Processing Pipeline 97181ce686f722d7be71cf0cdaf1b011 https://www.encodeproject.org/files/ENCFF218VKE/@@download/ENCFF218VKE.bigWig GRCh38 released low read depth, low read length, moderate library complexity experiment not submitted to GEO severe bottlenecking ENCFF077TWK bigBed narrowPeak peaks ENCSR791OZM ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM25-human ENCAB401CSY DNA SDS formaldehyde False 2018-01-18 ENCODE 2 ENCFF681CMB 11401379 ENCODE Processing Pipeline c11c4be1f5bf66ba1cd6c3a4f039626d https://www.encodeproject.org/files/ENCFF077TWK/@@download/ENCFF077TWK.bigBed hg19 released low read depth, low read length, moderate library complexity experiment not submitted to GEO severe bottlenecking ENCFF765PXM bigBed narrowPeak conservative idr thresholded peaks ENCSR791OZM ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM25-human ENCAB401CSY DNA SDS formaldehyde False 2018-01-18 ENCODE 1, 2 ENCFF966SQD 1643392 ENCODE Processing Pipeline d3986cf98d2eb17a8715ccafbf81697f https://www.encodeproject.org/files/ENCFF765PXM/@@download/ENCFF765PXM.bigBed hg19 released low read depth, low read length, moderate library complexity experiment not submitted to GEO severe bottlenecking ENCFF681CMB bed narrowPeak peaks ENCSR791OZM ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM25-human ENCAB401CSY DNA SDS formaldehyde False 2018-01-18 ENCODE 2 ENCFF180WYS, ENCFF641CEP 5819204 ENCODE Processing Pipeline 4ddb077d189adb2ff36f36687fabb5cf https://www.encodeproject.org/files/ENCFF681CMB/@@download/ENCFF681CMB.bed.gz hg19 released low read depth, low read length, moderate library complexity experiment not submitted to GEO severe bottlenecking ENCFF897BPO bed narrowPeak peaks ENCSR791OZM ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM25-human ENCAB401CSY DNA SDS formaldehyde False 2018-01-18 ENCODE 1 ENCFF214QGI, ENCFF493QSH 5697366 ENCODE Processing Pipeline d3bd0b546b414a6fbca8eefc9ff5495d https://www.encodeproject.org/files/ENCFF897BPO/@@download/ENCFF897BPO.bed.gz hg19 released low read depth, low read length, moderate library complexity experiment not submitted to GEO severe bottlenecking ENCFF680WBN bed narrowPeak optimal idr thresholded peaks ENCSR791OZM ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM25-human ENCAB401CSY DNA SDS formaldehyde False 2018-01-18 ENCODE 1, 2 ENCFF001TDO, ENCFF199EYR, ENCFF681CMB, ENCFF897BPO 854155 ENCODE Processing Pipeline 722400e3eba7df91df323e11a2b0e897 https://www.encodeproject.org/files/ENCFF680WBN/@@download/ENCFF680WBN.bed.gz hg19 released low read depth, low read length, moderate library complexity experiment not submitted to GEO severe bottlenecking ENCFF933VEZ bigWig fold change over control ENCSR791OZM ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM25-human ENCAB401CSY DNA SDS formaldehyde False 2018-01-18 ENCODE 1 ENCFF214QGI, ENCFF493QSH 495699199 ENCODE Processing Pipeline 903544dd07fbe36815e0c55c2e9eefa6 https://www.encodeproject.org/files/ENCFF933VEZ/@@download/ENCFF933VEZ.bigWig hg19 released low read depth, low read length, moderate library complexity experiment not submitted to GEO severe bottlenecking ENCFF248ZYN bigWig signal p-value ENCSR791OZM ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM25-human ENCAB401CSY DNA SDS formaldehyde False 2018-01-18 ENCODE 1, 2 ENCFF180WYS, ENCFF214QGI, ENCFF493QSH, ENCFF641CEP 1201612536 ENCODE Processing Pipeline 497232cf0ee8b0cc658aee9b4cc6eb43 https://www.encodeproject.org/files/ENCFF248ZYN/@@download/ENCFF248ZYN.bigWig hg19 released low read depth, low read length, moderate library complexity experiment not submitted to GEO severe bottlenecking ENCFF451ACZ bigWig fold change over control ENCSR791OZM ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM25-human ENCAB401CSY DNA SDS formaldehyde False 2018-01-18 ENCODE 2 ENCFF180WYS, ENCFF641CEP 498656918 ENCODE Processing Pipeline 3fb28ef628bc77897d96f8993061f16f https://www.encodeproject.org/files/ENCFF451ACZ/@@download/ENCFF451ACZ.bigWig hg19 released low read depth, low read length, moderate library complexity experiment not submitted to GEO severe bottlenecking ENCFF055SDX bigBed narrowPeak peaks ENCSR791OZM ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM25-human ENCAB401CSY DNA SDS formaldehyde False 2018-01-18 ENCODE 1, 2 ENCFF199EYR 13947545 ENCODE Processing Pipeline f433c343bccb0b6281e0e10207eee980 https://www.encodeproject.org/files/ENCFF055SDX/@@download/ENCFF055SDX.bigBed hg19 released low read depth, low read length, moderate library complexity experiment not submitted to GEO severe bottlenecking ENCFF966SQD bed narrowPeak conservative idr thresholded peaks ENCSR791OZM ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM25-human ENCAB401CSY DNA SDS formaldehyde False 2018-01-18 ENCODE 1, 2 ENCFF001TDO, ENCFF199EYR, ENCFF681CMB, ENCFF897BPO 826704 ENCODE Processing Pipeline 7c33b35f9a5092f739f991ca84843dde https://www.encodeproject.org/files/ENCFF966SQD/@@download/ENCFF966SQD.bed.gz hg19 released low read depth, low read length, moderate library complexity experiment not submitted to GEO severe bottlenecking ENCFF590KDQ bigWig signal p-value ENCSR791OZM ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM25-human ENCAB401CSY DNA SDS formaldehyde False 2018-01-18 ENCODE 2 ENCFF180WYS, ENCFF641CEP 654024747 ENCODE Processing Pipeline be4ab4fd73d36c4284b2ad0410963905 https://www.encodeproject.org/files/ENCFF590KDQ/@@download/ENCFF590KDQ.bigWig hg19 released low read depth, low read length, moderate library complexity experiment not submitted to GEO severe bottlenecking ENCFF940QNN bigWig signal p-value ENCSR791OZM ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM25-human ENCAB401CSY DNA SDS formaldehyde False 2018-01-18 ENCODE 1 ENCFF214QGI, ENCFF493QSH 665174305 ENCODE Processing Pipeline 3cb6f07990546dc898bd0415fb3c7513 https://www.encodeproject.org/files/ENCFF940QNN/@@download/ENCFF940QNN.bigWig hg19 released low read depth, low read length, moderate library complexity experiment not submitted to GEO severe bottlenecking ENCFF821RCB bigWig fold change over control ENCSR791OZM ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM25-human ENCAB401CSY DNA SDS formaldehyde False 2018-01-18 ENCODE 1, 2 ENCFF180WYS, ENCFF214QGI, ENCFF493QSH, ENCFF641CEP 1100067975 ENCODE Processing Pipeline 964c01eb8ae69159db99501ed078eeaf https://www.encodeproject.org/files/ENCFF821RCB/@@download/ENCFF821RCB.bigWig hg19 released low read depth, low read length, moderate library complexity experiment not submitted to GEO severe bottlenecking ENCFF199EYR bed narrowPeak peaks ENCSR791OZM ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM25-human ENCAB401CSY DNA SDS formaldehyde False 2018-01-18 ENCODE 1, 2 ENCFF180WYS, ENCFF214QGI, ENCFF493QSH, ENCFF641CEP 6808347 ENCODE Processing Pipeline 615b7294fc8f64c118dd424d3340ffe0 https://www.encodeproject.org/files/ENCFF199EYR/@@download/ENCFF199EYR.bed.gz hg19 released low read depth, low read length, moderate library complexity experiment not submitted to GEO severe bottlenecking ENCFF258BLV bigBed narrowPeak peaks ENCSR791OZM ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM25-human ENCAB401CSY DNA SDS formaldehyde False 2018-01-18 ENCODE 1 ENCFF897BPO 11368222 ENCODE Processing Pipeline 8192e866a60dd23481f168a6994409b7 https://www.encodeproject.org/files/ENCFF258BLV/@@download/ENCFF258BLV.bigBed hg19 released low read depth, low read length, moderate library complexity experiment not submitted to GEO severe bottlenecking ENCFF252IOK bigBed narrowPeak optimal idr thresholded peaks ENCSR791OZM ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM25-human ENCAB401CSY DNA SDS formaldehyde False 2018-01-18 ENCODE 1, 2 ENCFF680WBN 1686409 ENCODE Processing Pipeline 9a838e4f9c7a4f2a168247fabe68c60b https://www.encodeproject.org/files/ENCFF252IOK/@@download/ENCFF252IOK.bigBed hg19 released low read depth, low read length, moderate library complexity experiment not submitted to GEO severe bottlenecking ENCFF064GRX bam unfiltered alignments ENCSR882ERE ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZKSCAN1-human ENCAB000AMP DNA False 2016-03-02 ENCODE 2 36 ENCFF002EWQ, ENCFF807MUK 950461342 ENCODE Processing Pipeline 34838dce5a8b00f132dc574e18c3cb87 https://www.encodeproject.org/files/ENCFF064GRX/@@download/ENCFF064GRX.bam hg19 released low read depth, low read length missing control alignments ENCFF902RKT bam unfiltered alignments ENCSR882ERE ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZKSCAN1-human ENCAB000AMP DNA False 2016-03-02 ENCODE 1 36 ENCFF002EWL, ENCFF807MUK 965621764 ENCODE Processing Pipeline 7abecd3eca10273ea515bf6d46c6003d https://www.encodeproject.org/files/ENCFF902RKT/@@download/ENCFF902RKT.bam hg19 released low read depth, low read length missing control alignments ENCFF002EWL fastq reads ENCSR882ERE ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZKSCAN1-human ENCAB000AMP DNA False 2016-03-02 ENCODE 1 1 36 single-ended 782959243 Michael Snyder, Stanford 5127ab9a4a2e43a3d75c2fe11738b1aa SRA:SRR5112229 https://www.encodeproject.org/files/ENCFF002EWL/@@download/ENCFF002EWL.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF002ECW/ released low read depth, low read length missing control alignments ENCFF002EWQ fastq reads ENCSR882ERE ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZKSCAN1-human ENCAB000AMP DNA False 2016-03-02 ENCODE 2 1 36 single-ended 771329231 Michael Snyder, Stanford 4b01ab588622ea4d87717a71bd9bbe3d SRA:SRR5112228 https://www.encodeproject.org/files/ENCFF002EWQ/@@download/ENCFF002EWQ.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF002ECS/ released low read depth, low read length missing control alignments ENCFF142DHE bam alignments ENCSR882ERE ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZKSCAN1-human ENCAB000AMP DNA False 2016-03-02 ENCODE 1 36 ENCFF002EWL, ENCFF807MUK 684222439 ENCODE Processing Pipeline 827004a5833f37a501dddab4137ad654 https://www.encodeproject.org/files/ENCFF142DHE/@@download/ENCFF142DHE.bam hg19 released low read depth, low read length missing control alignments ENCFF169POV bam alignments ENCSR882ERE ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZKSCAN1-human ENCAB000AMP DNA False 2016-03-02 ENCODE 2 36 ENCFF002EWQ, ENCFF807MUK 637993501 ENCODE Processing Pipeline c58cddb267ce40bcf76573d0e831a443 https://www.encodeproject.org/files/ENCFF169POV/@@download/ENCFF169POV.bam hg19 released low read depth, low read length missing control alignments ENCFF515ECY bigBed narrowPeak peaks ENCSR882ERE ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZKSCAN1-human ENCAB000AMP DNA False 2016-03-02 ENCODE 1 ENCFF656CUX 13165267 ENCODE Processing Pipeline 87ae6d3ab9341fe1be35479fc4cdcc47 https://www.encodeproject.org/files/ENCFF515ECY/@@download/ENCFF515ECY.bigBed hg19 released low read depth, low read length missing control alignments ENCFF927YWD bigWig signal p-value ENCSR882ERE ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZKSCAN1-human ENCAB000AMP DNA False 2016-03-02 ENCODE 1 ENCFF142DHE, ENCFF335IPE 587608876 ENCODE Processing Pipeline 7b65642d385e214befb793f15b7a3354 https://www.encodeproject.org/files/ENCFF927YWD/@@download/ENCFF927YWD.bigWig hg19 released low read depth, low read length missing control alignments ENCFF040DGA bed narrowPeak peaks ENCSR882ERE ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZKSCAN1-human ENCAB000AMP DNA False 2016-03-02 ENCODE 2 ENCFF169POV, ENCFF879OQC 5183776 ENCODE Processing Pipeline d9c3da1be91de8c8c2e9fa1a52c88cdc https://www.encodeproject.org/files/ENCFF040DGA/@@download/ENCFF040DGA.bed.gz hg19 released low read depth, low read length missing control alignments ENCFF511MUZ bed narrowPeak peaks ENCSR882ERE ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZKSCAN1-human ENCAB000AMP DNA False 2016-03-02 ENCODE 1, 2 ENCFF142DHE, ENCFF169POV, ENCFF335IPE, ENCFF879OQC 6576913 ENCODE Processing Pipeline 68449846a7b35262d721f508bfd0d5d4 https://www.encodeproject.org/files/ENCFF511MUZ/@@download/ENCFF511MUZ.bed.gz hg19 released low read depth, low read length missing control alignments ENCFF380EJH bigWig signal p-value ENCSR882ERE ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZKSCAN1-human ENCAB000AMP DNA False 2016-03-02 ENCODE 1, 2 ENCFF142DHE, ENCFF169POV, ENCFF335IPE, ENCFF879OQC 977582960 ENCODE Processing Pipeline 07a527068a413589b3068520051cf66b https://www.encodeproject.org/files/ENCFF380EJH/@@download/ENCFF380EJH.bigWig hg19 released low read depth, low read length missing control alignments ENCFF181YKE bigWig fold change over control ENCSR882ERE ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZKSCAN1-human ENCAB000AMP DNA False 2016-03-02 ENCODE 1, 2 ENCFF142DHE, ENCFF169POV, ENCFF335IPE, ENCFF879OQC 869611657 ENCODE Processing Pipeline 84075c89bcb37391b9bbd35220ed5fbe https://www.encodeproject.org/files/ENCFF181YKE/@@download/ENCFF181YKE.bigWig hg19 released low read depth, low read length missing control alignments ENCFF365UEM bigWig signal p-value ENCSR882ERE ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZKSCAN1-human ENCAB000AMP DNA False 2016-03-02 ENCODE 2 ENCFF169POV, ENCFF879OQC 496019400 ENCODE Processing Pipeline fe3f6d11e78e3d2a3fbd79410917dd8c https://www.encodeproject.org/files/ENCFF365UEM/@@download/ENCFF365UEM.bigWig hg19 released low read depth, low read length missing control alignments ENCFF865WJI bigWig fold change over control ENCSR882ERE ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZKSCAN1-human ENCAB000AMP DNA False 2016-03-02 ENCODE 1 ENCFF142DHE, ENCFF335IPE 390896763 ENCODE Processing Pipeline 5c69708a8384d886c5bccac05dadb574 https://www.encodeproject.org/files/ENCFF865WJI/@@download/ENCFF865WJI.bigWig hg19 released low read depth, low read length missing control alignments ENCFF316MAN bigWig fold change over control ENCSR882ERE ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZKSCAN1-human ENCAB000AMP DNA False 2016-03-02 ENCODE 2 ENCFF169POV, ENCFF879OQC 352340545 ENCODE Processing Pipeline 275bdab18299a1391ae39c5db4b393a0 https://www.encodeproject.org/files/ENCFF316MAN/@@download/ENCFF316MAN.bigWig hg19 released low read depth, low read length missing control alignments ENCFF384ICP bigBed narrowPeak peaks ENCSR882ERE ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZKSCAN1-human ENCAB000AMP DNA False 2016-03-02 ENCODE 2 ENCFF040DGA 10883350 ENCODE Processing Pipeline ab8ee4d22a4ecae64b07eccf30d25376 https://www.encodeproject.org/files/ENCFF384ICP/@@download/ENCFF384ICP.bigBed hg19 released low read depth, low read length missing control alignments ENCFF540HHN bigBed narrowPeak peaks ENCSR882ERE ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZKSCAN1-human ENCAB000AMP DNA False 2016-03-02 ENCODE 1, 2 ENCFF511MUZ 13292659 ENCODE Processing Pipeline fa2b324b0cbfc0de4c4cdafc4f1d0b99 https://www.encodeproject.org/files/ENCFF540HHN/@@download/ENCFF540HHN.bigBed hg19 released low read depth, low read length missing control alignments ENCFF656CUX bed narrowPeak peaks ENCSR882ERE ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZKSCAN1-human ENCAB000AMP DNA False 2016-03-02 ENCODE 1 ENCFF142DHE, ENCFF335IPE 5509302 ENCODE Processing Pipeline 942fb93cdd4270c3101187df6db73966 https://www.encodeproject.org/files/ENCFF656CUX/@@download/ENCFF656CUX.bed.gz hg19 released low read depth, low read length missing control alignments ENCFF752RHL bam unfiltered alignments ENCSR882ERE ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZKSCAN1-human ENCAB000AMP DNA False 2016-03-02 ENCODE 1 36 ENCFF002EWL, ENCFF643CGH 969572865 ENCODE Processing Pipeline 95a0b077144295f4cfb30d35ef6cc0cc https://www.encodeproject.org/files/ENCFF752RHL/@@download/ENCFF752RHL.bam GRCh38 released low read depth, low read length missing control alignments ENCFF359UJQ bam unfiltered alignments ENCSR882ERE ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZKSCAN1-human ENCAB000AMP DNA False 2016-03-02 ENCODE 2 36 ENCFF002EWQ, ENCFF643CGH 954488521 ENCODE Processing Pipeline 9ebcf4c47ec8e5cbb039fba09a40dd3f https://www.encodeproject.org/files/ENCFF359UJQ/@@download/ENCFF359UJQ.bam GRCh38 released low read depth, low read length missing control alignments ENCFF071KOM bam alignments ENCSR882ERE ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZKSCAN1-human ENCAB000AMP DNA False 2016-03-02 ENCODE 1 36 ENCFF002EWL, ENCFF643CGH 683721458 ENCODE Processing Pipeline 108239b49ca7146ee85240e2e9d46e96 https://www.encodeproject.org/files/ENCFF071KOM/@@download/ENCFF071KOM.bam GRCh38 released low read depth, low read length missing control alignments ENCFF236ZUN bam alignments ENCSR882ERE ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZKSCAN1-human ENCAB000AMP DNA False 2016-03-02 ENCODE 2 36 ENCFF002EWQ, ENCFF643CGH 637516364 ENCODE Processing Pipeline b7b7915f67625dc7d6aeeca40396539e https://www.encodeproject.org/files/ENCFF236ZUN/@@download/ENCFF236ZUN.bam GRCh38 released low read depth, low read length missing control alignments ENCFF117CUT bigWig signal p-value ENCSR882ERE ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZKSCAN1-human ENCAB000AMP DNA False 2016-03-02 ENCODE 1 ENCFF071KOM 474913174 ENCODE Processing Pipeline 42cf6023b9715b84ce54f654334aa5c5 https://www.encodeproject.org/files/ENCFF117CUT/@@download/ENCFF117CUT.bigWig GRCh38 released low read depth, low read length missing control alignments ENCFF584ZQG bigWig signal p-value ENCSR882ERE ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZKSCAN1-human ENCAB000AMP DNA False 2016-03-02 ENCODE 2 ENCFF236ZUN 440144057 ENCODE Processing Pipeline f215e209cd8591389bfefaa4cd1756c3 https://www.encodeproject.org/files/ENCFF584ZQG/@@download/ENCFF584ZQG.bigWig GRCh38 released low read depth, low read length missing control alignments ENCFF683FPP bigWig signal p-value ENCSR882ERE ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZKSCAN1-human ENCAB000AMP DNA False 2016-03-02 ENCODE 1, 2 ENCFF071KOM, ENCFF236ZUN 912603960 ENCODE Processing Pipeline 8b058967e75d2a5761783cdf177218bc https://www.encodeproject.org/files/ENCFF683FPP/@@download/ENCFF683FPP.bigWig GRCh38 released low read depth, low read length missing control alignments ENCFF285YVY bigWig fold change over control ENCSR882ERE ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZKSCAN1-human ENCAB000AMP DNA False 2016-03-02 ENCODE 1 ENCFF071KOM 398206128 ENCODE Processing Pipeline 4a14ceca315d760da950459bdf1ee3ba https://www.encodeproject.org/files/ENCFF285YVY/@@download/ENCFF285YVY.bigWig GRCh38 released low read depth, low read length missing control alignments ENCFF332RUF bigWig fold change over control ENCSR882ERE ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZKSCAN1-human ENCAB000AMP DNA False 2016-03-02 ENCODE 2 ENCFF236ZUN 360575643 ENCODE Processing Pipeline 4946b917dd8b66b345ea941f8c1054b0 https://www.encodeproject.org/files/ENCFF332RUF/@@download/ENCFF332RUF.bigWig GRCh38 released low read depth, low read length missing control alignments ENCFF933HRZ bigWig fold change over control ENCSR882ERE ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZKSCAN1-human ENCAB000AMP DNA False 2016-03-02 ENCODE 1, 2 ENCFF071KOM, ENCFF236ZUN 873003975 ENCODE Processing Pipeline 68498cb65ae0475df43a22cc7edd6299 https://www.encodeproject.org/files/ENCFF933HRZ/@@download/ENCFF933HRZ.bigWig GRCh38 released low read depth, low read length missing control alignments ENCFF754IPA bed narrowPeak peaks ENCSR882ERE ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZKSCAN1-human ENCAB000AMP DNA False 2016-03-02 ENCODE 1 ENCFF071KOM 5352511 ENCODE Processing Pipeline fa8eec71959d25b682dfb21f43951c1d https://www.encodeproject.org/files/ENCFF754IPA/@@download/ENCFF754IPA.bed.gz GRCh38 released low read depth, low read length missing control alignments ENCFF668AKQ bed narrowPeak peaks ENCSR882ERE ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZKSCAN1-human ENCAB000AMP DNA False 2016-03-02 ENCODE 2 ENCFF236ZUN 5014630 ENCODE Processing Pipeline 4049c27a5843a5815bf35159520dbd49 https://www.encodeproject.org/files/ENCFF668AKQ/@@download/ENCFF668AKQ.bed.gz GRCh38 released low read depth, low read length missing control alignments ENCFF888HUZ bed narrowPeak peaks ENCSR882ERE ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZKSCAN1-human ENCAB000AMP DNA False 2016-03-02 ENCODE 1, 2 ENCFF071KOM, ENCFF236ZUN 6409968 ENCODE Processing Pipeline 37aade51ca8c101b19a1ba9287be93d0 https://www.encodeproject.org/files/ENCFF888HUZ/@@download/ENCFF888HUZ.bed.gz GRCh38 released low read depth, low read length missing control alignments ENCFF550ZWG bigBed narrowPeak peaks ENCSR882ERE ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZKSCAN1-human ENCAB000AMP DNA False 2016-03-02 ENCODE 2 ENCFF668AKQ 10819664 ENCODE Processing Pipeline 69f2b5d452ca1460879c3a9648b8185b https://www.encodeproject.org/files/ENCFF550ZWG/@@download/ENCFF550ZWG.bigBed GRCh38 released low read depth, low read length missing control alignments ENCFF329HLY bed narrowPeak conservative idr thresholded peaks ENCSR882ERE ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZKSCAN1-human ENCAB000AMP DNA False 2016-03-02 ENCODE 1, 2 ENCFF419RSJ, ENCFF668AKQ, ENCFF754IPA, ENCFF888HUZ 206776 ENCODE Processing Pipeline 1c824728b9b5a4a4405445ae382afbc2 https://www.encodeproject.org/files/ENCFF329HLY/@@download/ENCFF329HLY.bed.gz GRCh38 released low read depth, low read length missing control alignments ENCFF849AUA bigBed narrowPeak peaks ENCSR882ERE ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZKSCAN1-human ENCAB000AMP DNA False 2016-03-02 ENCODE 1 ENCFF754IPA 13093617 ENCODE Processing Pipeline b2e643c809a887eb82341a1cc3d80508 https://www.encodeproject.org/files/ENCFF849AUA/@@download/ENCFF849AUA.bigBed GRCh38 released low read depth, low read length missing control alignments ENCFF049SYU bigBed narrowPeak peaks ENCSR882ERE ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZKSCAN1-human ENCAB000AMP DNA False 2016-03-02 ENCODE 1, 2 ENCFF888HUZ 13285460 ENCODE Processing Pipeline 1c8bbf3ac033d340bbe79b9e17235645 https://www.encodeproject.org/files/ENCFF049SYU/@@download/ENCFF049SYU.bigBed GRCh38 released low read depth, low read length missing control alignments ENCFF604RVC bigBed narrowPeak conservative idr thresholded peaks ENCSR882ERE ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZKSCAN1-human ENCAB000AMP DNA False 2016-03-02 ENCODE 1, 2 ENCFF329HLY 417757 ENCODE Processing Pipeline c536fef19aaf9a92910a09a9201b3798 https://www.encodeproject.org/files/ENCFF604RVC/@@download/ENCFF604RVC.bigBed GRCh38 released low read depth, low read length missing control alignments ENCFF704VDI bed narrowPeak optimal idr thresholded peaks ENCSR882ERE ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZKSCAN1-human ENCAB000AMP DNA False 2016-03-02 ENCODE 1, 2 ENCFF419RSJ, ENCFF668AKQ, ENCFF754IPA, ENCFF888HUZ 215226 ENCODE Processing Pipeline d73efa30d687f0d6906ccc21b9513aa8 https://www.encodeproject.org/files/ENCFF704VDI/@@download/ENCFF704VDI.bed.gz GRCh38 released low read depth, low read length missing control alignments ENCFF398CYU bigBed narrowPeak optimal idr thresholded peaks ENCSR882ERE ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZKSCAN1-human ENCAB000AMP DNA False 2016-03-02 ENCODE 1, 2 ENCFF704VDI 430792 ENCODE Processing Pipeline 14a07d144782e1dae4d2296f3b22ddb4 https://www.encodeproject.org/files/ENCFF398CYU/@@download/ENCFF398CYU.bigBed GRCh38 released low read depth, low read length missing control alignments ENCFF090QJO bed narrowPeak conservative idr thresholded peaks ENCSR882ERE ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZKSCAN1-human ENCAB000AMP DNA False 2016-03-02 ENCODE 1, 2 ENCFF001TDO, ENCFF040DGA, ENCFF511MUZ, ENCFF656CUX 180739 ENCODE Processing Pipeline e3cadc3a3da564b018420bd1c26738f9 https://www.encodeproject.org/files/ENCFF090QJO/@@download/ENCFF090QJO.bed.gz hg19 released low read depth, low read length missing control alignments ENCFF163VUK bed narrowPeak optimal idr thresholded peaks ENCSR882ERE ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZKSCAN1-human ENCAB000AMP DNA False 2016-03-02 ENCODE 1, 2 ENCFF001TDO, ENCFF040DGA, ENCFF511MUZ, ENCFF656CUX 217692 ENCODE Processing Pipeline c743b22b355085c49a0ee67adfa8f5f2 https://www.encodeproject.org/files/ENCFF163VUK/@@download/ENCFF163VUK.bed.gz hg19 released low read depth, low read length missing control alignments ENCFF799FES bigBed narrowPeak conservative idr thresholded peaks ENCSR882ERE ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZKSCAN1-human ENCAB000AMP DNA False 2016-03-02 ENCODE 1, 2 ENCFF090QJO 380553 ENCODE Processing Pipeline 7027cb9a1d1ab923a3f2329adaca5ef0 https://www.encodeproject.org/files/ENCFF799FES/@@download/ENCFF799FES.bigBed hg19 released low read depth, low read length missing control alignments ENCFF569QID bigBed narrowPeak optimal idr thresholded peaks ENCSR882ERE ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZKSCAN1-human ENCAB000AMP DNA False 2016-03-02 ENCODE 1, 2 ENCFF163VUK 430758 ENCODE Processing Pipeline e52e0814ae676769508808b841e4ad5d https://www.encodeproject.org/files/ENCFF569QID/@@download/ENCFF569QID.bigBed hg19 released low read depth, low read length missing control alignments ENCFF000QIF bam alignments ENCSR000BRK ChIP-seq EFO:0002067 K562 cell line Homo sapiens TEAD4-human ENCAB000ALW DNA see document see document False 2012-02-29 ENCODE 1 ENCFF000QIS 1547529622 Richard Myers, HAIB 578a7c37f568b487c9a945eb57beaf27 https://www.encodeproject.org/files/ENCFF000QIF/@@download/ENCFF000QIF.bam hg19 archived inconsistent platforms, low read length biological replicates with identical biosample ENCFF000QIG bigBed broadPeak peaks ENCSR000BRK ChIP-seq EFO:0002067 K562 cell line Homo sapiens TEAD4-human ENCAB000ALW DNA see document see document False 2012-02-29 ENCODE 1 1 ENCFF001ULR 670584 Richard Myers, HAIB 0d6607d4e4957dfe4c8d0cfd04223af2 https://www.encodeproject.org/files/ENCFF000QIG/@@download/ENCFF000QIG.bigBed hg19 archived inconsistent platforms, low read length biological replicates with identical biosample ENCFF000QIH bigBed broadPeak peaks ENCSR000BRK ChIP-seq EFO:0002067 K562 cell line Homo sapiens TEAD4-human ENCAB000ALW DNA see document see document False 2012-02-29 ENCODE 2 1 ENCFF001ULT 1266312 Richard Myers, HAIB 57ee534deeec248617c83375ed075b2a https://www.encodeproject.org/files/ENCFF000QIH/@@download/ENCFF000QIH.bigBed hg19 archived inconsistent platforms, low read length biological replicates with identical biosample ENCFF000QIJ bam alignments ENCSR000BRK ChIP-seq EFO:0002067 K562 cell line Homo sapiens TEAD4-human ENCAB000ALW DNA see document see document False 2012-02-29 ENCODE 2 ENCFF000QIW 1899072688 Richard Myers, HAIB 26d4a74d3bf5c8fbece32811bbdf16be https://www.encodeproject.org/files/ENCFF000QIJ/@@download/ENCFF000QIJ.bam hg19 archived inconsistent platforms, low read length biological replicates with identical biosample ENCFF000QIK bigWig raw signal ENCSR000BRK ChIP-seq EFO:0002067 K562 cell line Homo sapiens TEAD4-human ENCAB000ALW DNA see document see document False 2012-02-29 ENCODE 1 1 35704916 Richard Myers, HAIB 502c2a3ee3cd02bfa9a39bc4add058e0 https://www.encodeproject.org/files/ENCFF000QIK/@@download/ENCFF000QIK.bigWig hg19 archived inconsistent platforms, low read length biological replicates with identical biosample, missing derived_from ENCFF000QIL bigWig raw signal ENCSR000BRK ChIP-seq EFO:0002067 K562 cell line Homo sapiens TEAD4-human ENCAB000ALW DNA see document see document False 2012-02-29 ENCODE 2 1 53989655 Richard Myers, HAIB 50d273c523bff1fe65cb675b757fe426 https://www.encodeproject.org/files/ENCFF000QIL/@@download/ENCFF000QIL.bigWig hg19 archived inconsistent platforms, low read length biological replicates with identical biosample, missing derived_from ENCFF000QIS fastq reads ENCSR000BRK ChIP-seq EFO:0002067 K562 cell line Homo sapiens TEAD4-human ENCAB000ALW DNA see document see document False 2012-02-29 ENCODE 1 1 36 single-ended 1517577972 Richard Myers, HAIB 5e1a8fd6006d430d0d04d2678dc4b311 https://www.encodeproject.org/files/ENCFF000QIS/@@download/ENCFF000QIS.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000QFG/ released inconsistent platforms, low read length biological replicates with identical biosample ENCFF000QIW fastq reads ENCSR000BRK ChIP-seq EFO:0002067 K562 cell line Homo sapiens TEAD4-human ENCAB000ALW DNA see document see document False 2012-02-29 ENCODE 2 1 36 single-ended 1916430655 Richard Myers, HAIB aea18ce14472eebcc9d525e2f86a9aa2 https://www.encodeproject.org/files/ENCFF000QIW/@@download/ENCFF000QIW.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000QFG/ released inconsistent platforms, low read length biological replicates with identical biosample ENCFF001ULR bed broadPeak peaks ENCSR000BRK ChIP-seq EFO:0002067 K562 cell line Homo sapiens TEAD4-human ENCAB000ALW DNA see document see document False 2012-02-29 ENCODE 1 1 433550 Richard Myers, HAIB 7ab62d6adc72f387a4659bd33c6c6bef https://www.encodeproject.org/files/ENCFF001ULR/@@download/ENCFF001ULR.bed.gz hg19 archived inconsistent platforms, low read length biological replicates with identical biosample, missing derived_from ENCFF001ULT bed broadPeak peaks ENCSR000BRK ChIP-seq EFO:0002067 K562 cell line Homo sapiens TEAD4-human ENCAB000ALW DNA see document see document False 2012-02-29 ENCODE 2 1 765383 Richard Myers, HAIB 0dcd4573da528a6e7a40ccea2eecb7a6 https://www.encodeproject.org/files/ENCFF001ULT/@@download/ENCFF001ULT.bed.gz hg19 archived inconsistent platforms, low read length biological replicates with identical biosample, missing derived_from ENCFF002CMT bed narrowPeak optimal idr thresholded peaks ENCSR000BRK ChIP-seq EFO:0002067 K562 cell line Homo sapiens TEAD4-human ENCAB000ALW DNA see document see document False 2012-02-29 ENCODE 623516 ENCODE Consortium Analysis Working Group 90e37355f317426523602e11b566c865 https://www.encodeproject.org/files/ENCFF002CMT/@@download/ENCFF002CMT.bed.gz hg19 archived inconsistent platforms, low read length biological replicates with identical biosample, missing derived_from ENCFF619KVA bigBed narrowPeak optimal idr thresholded peaks ENCSR000BRK ChIP-seq EFO:0002067 K562 cell line Homo sapiens TEAD4-human ENCAB000ALW DNA see document see document False 2012-02-29 ENCODE ENCFF002CMT 1252703 ENCODE Consortium 3a72697c1469b0e6fc44119722beea92 https://www.encodeproject.org/files/ENCFF619KVA/@@download/ENCFF619KVA.bigBed hg19 archived inconsistent platforms, low read length biological replicates with identical biosample ENCFF683WRR bam unfiltered alignments ENCSR000BRK ChIP-seq EFO:0002067 K562 cell line Homo sapiens TEAD4-human ENCAB000ALW DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000QIS, ENCFF643CGH 1682641840 ENCODE Processing Pipeline 4e2dcf27975e5ebda4d4e3de3e9b77ce https://www.encodeproject.org/files/ENCFF683WRR/@@download/ENCFF683WRR.bam GRCh38 released inconsistent platforms, low read length biological replicates with identical biosample ENCFF790FNF bam alignments ENCSR000BRK ChIP-seq EFO:0002067 K562 cell line Homo sapiens TEAD4-human ENCAB000ALW DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000QIS, ENCFF643CGH 1122993833 ENCODE Processing Pipeline 880064634930df4e6e5799ee789c241a https://www.encodeproject.org/files/ENCFF790FNF/@@download/ENCFF790FNF.bam GRCh38 released inconsistent platforms, low read length biological replicates with identical biosample ENCFF324YZW bam unfiltered alignments ENCSR000BRK ChIP-seq EFO:0002067 K562 cell line Homo sapiens TEAD4-human ENCAB000ALW DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000QIW, ENCFF643CGH 2077785756 ENCODE Processing Pipeline 61008059b220d2264b99e07b0307adf9 https://www.encodeproject.org/files/ENCFF324YZW/@@download/ENCFF324YZW.bam GRCh38 released inconsistent platforms, low read length biological replicates with identical biosample ENCFF516UTV bam alignments ENCSR000BRK ChIP-seq EFO:0002067 K562 cell line Homo sapiens TEAD4-human ENCAB000ALW DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000QIW, ENCFF643CGH 1332696728 ENCODE Processing Pipeline 0e31d980062fc4145af69385d6201308 https://www.encodeproject.org/files/ENCFF516UTV/@@download/ENCFF516UTV.bam GRCh38 released inconsistent platforms, low read length biological replicates with identical biosample ENCFF386SKS bam alignments ENCSR000BRK ChIP-seq EFO:0002067 K562 cell line Homo sapiens TEAD4-human ENCAB000ALW DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000QIS, ENCFF807MUK 1123456658 ENCODE Processing Pipeline db09a915c690d33899f975c7d3c60aab https://www.encodeproject.org/files/ENCFF386SKS/@@download/ENCFF386SKS.bam hg19 released inconsistent platforms, low read length biological replicates with identical biosample ENCFF102ECA bam unfiltered alignments ENCSR000BRK ChIP-seq EFO:0002067 K562 cell line Homo sapiens TEAD4-human ENCAB000ALW DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000QIS, ENCFF807MUK 1679321416 ENCODE Processing Pipeline 5eeb2f4e1339b18cbbfff4c785479ff7 https://www.encodeproject.org/files/ENCFF102ECA/@@download/ENCFF102ECA.bam hg19 released inconsistent platforms, low read length biological replicates with identical biosample ENCFF616BNF bam unfiltered alignments ENCSR000BRK ChIP-seq EFO:0002067 K562 cell line Homo sapiens TEAD4-human ENCAB000ALW DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000QIW, ENCFF807MUK 2074168325 ENCODE Processing Pipeline 69fa2d86fef4b23e4b3aa89ad43ad422 https://www.encodeproject.org/files/ENCFF616BNF/@@download/ENCFF616BNF.bam hg19 released inconsistent platforms, low read length biological replicates with identical biosample ENCFF455XOX bam alignments ENCSR000BRK ChIP-seq EFO:0002067 K562 cell line Homo sapiens TEAD4-human ENCAB000ALW DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000QIW, ENCFF807MUK 1333424025 ENCODE Processing Pipeline a61a4c12a0e3bcfc903b45f45a6875fe https://www.encodeproject.org/files/ENCFF455XOX/@@download/ENCFF455XOX.bam hg19 released inconsistent platforms, low read length biological replicates with identical biosample ENCFF847WJF bigWig signal p-value ENCSR000BRK ChIP-seq EFO:0002067 K562 cell line Homo sapiens TEAD4-human ENCAB000ALW DNA see document see document False 2012-02-29 ENCODE 1 ENCFF790FNF, ENCFF836OEO 788196150 ENCODE Processing Pipeline 281463f090899befbba894808a2c9e4f https://www.encodeproject.org/files/ENCFF847WJF/@@download/ENCFF847WJF.bigWig GRCh38 released inconsistent platforms, low read length biological replicates with identical biosample ENCFF999MGO bigWig signal p-value ENCSR000BRK ChIP-seq EFO:0002067 K562 cell line Homo sapiens TEAD4-human ENCAB000ALW DNA see document see document False 2012-02-29 ENCODE 2 ENCFF516UTV, ENCFF836OEO 680521169 ENCODE Processing Pipeline ca15c3ac06e2c061f8874ea2342b9611 https://www.encodeproject.org/files/ENCFF999MGO/@@download/ENCFF999MGO.bigWig GRCh38 released inconsistent platforms, low read length biological replicates with identical biosample ENCFF853NIP bigWig signal p-value ENCSR000BRK ChIP-seq EFO:0002067 K562 cell line Homo sapiens TEAD4-human ENCAB000ALW DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF516UTV, ENCFF790FNF, ENCFF836OEO 826426884 ENCODE Processing Pipeline 164c60dc6a328a42464cb068c346e3be https://www.encodeproject.org/files/ENCFF853NIP/@@download/ENCFF853NIP.bigWig GRCh38 released inconsistent platforms, low read length biological replicates with identical biosample ENCFF940JMG bigWig fold change over control ENCSR000BRK ChIP-seq EFO:0002067 K562 cell line Homo sapiens TEAD4-human ENCAB000ALW DNA see document see document False 2012-02-29 ENCODE 1 ENCFF790FNF, ENCFF836OEO 629172388 ENCODE Processing Pipeline 4d7b2dcf94670c74ee82f38f652398b1 https://www.encodeproject.org/files/ENCFF940JMG/@@download/ENCFF940JMG.bigWig GRCh38 released inconsistent platforms, low read length biological replicates with identical biosample ENCFF724ZJT bigWig fold change over control ENCSR000BRK ChIP-seq EFO:0002067 K562 cell line Homo sapiens TEAD4-human ENCAB000ALW DNA see document see document False 2012-02-29 ENCODE 2 ENCFF516UTV, ENCFF836OEO 666200794 ENCODE Processing Pipeline 8156d06a1d1e44905a48108bba32f353 https://www.encodeproject.org/files/ENCFF724ZJT/@@download/ENCFF724ZJT.bigWig GRCh38 released inconsistent platforms, low read length biological replicates with identical biosample ENCFF950JFN bigWig fold change over control ENCSR000BRK ChIP-seq EFO:0002067 K562 cell line Homo sapiens TEAD4-human ENCAB000ALW DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF516UTV, ENCFF790FNF, ENCFF836OEO 1011329238 ENCODE Processing Pipeline 89256eda19052136568710800bce6303 https://www.encodeproject.org/files/ENCFF950JFN/@@download/ENCFF950JFN.bigWig GRCh38 released inconsistent platforms, low read length biological replicates with identical biosample ENCFF299QNM bed narrowPeak peaks ENCSR000BRK ChIP-seq EFO:0002067 K562 cell line Homo sapiens TEAD4-human ENCAB000ALW DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF516UTV, ENCFF790FNF, ENCFF836OEO 7037740 ENCODE Processing Pipeline 6f9388b8a1e1bd07f65361eafd5fb445 https://www.encodeproject.org/files/ENCFF299QNM/@@download/ENCFF299QNM.bed.gz GRCh38 released inconsistent platforms, low read length biological replicates with identical biosample ENCFF841NBP bed narrowPeak peaks ENCSR000BRK ChIP-seq EFO:0002067 K562 cell line Homo sapiens TEAD4-human ENCAB000ALW DNA see document see document False 2012-02-29 ENCODE 1 ENCFF790FNF, ENCFF836OEO 6212835 ENCODE Processing Pipeline ee29b0cffb6c589e4e173445c51c4f4a https://www.encodeproject.org/files/ENCFF841NBP/@@download/ENCFF841NBP.bed.gz GRCh38 released inconsistent platforms, low read length biological replicates with identical biosample ENCFF364WTP bigBed narrowPeak peaks ENCSR000BRK ChIP-seq EFO:0002067 K562 cell line Homo sapiens TEAD4-human ENCAB000ALW DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF299QNM 13142728 ENCODE Processing Pipeline b782e5b0bfd0f6415b8a74bae26dc042 https://www.encodeproject.org/files/ENCFF364WTP/@@download/ENCFF364WTP.bigBed GRCh38 released inconsistent platforms, low read length biological replicates with identical biosample ENCFF736BJY bed narrowPeak peaks ENCSR000BRK ChIP-seq EFO:0002067 K562 cell line Homo sapiens TEAD4-human ENCAB000ALW DNA see document see document False 2012-02-29 ENCODE 2 ENCFF516UTV, ENCFF836OEO 6566541 ENCODE Processing Pipeline 0253413adfbb4baa40646189ecfd0382 https://www.encodeproject.org/files/ENCFF736BJY/@@download/ENCFF736BJY.bed.gz GRCh38 released inconsistent platforms, low read length biological replicates with identical biosample ENCFF878SHR bigBed narrowPeak peaks ENCSR000BRK ChIP-seq EFO:0002067 K562 cell line Homo sapiens TEAD4-human ENCAB000ALW DNA see document see document False 2012-02-29 ENCODE 1 ENCFF841NBP 13173228 ENCODE Processing Pipeline 4efd1fdc6e48b90c5b745f11416320c9 https://www.encodeproject.org/files/ENCFF878SHR/@@download/ENCFF878SHR.bigBed GRCh38 released inconsistent platforms, low read length biological replicates with identical biosample ENCFF562CUC bigBed narrowPeak peaks ENCSR000BRK ChIP-seq EFO:0002067 K562 cell line Homo sapiens TEAD4-human ENCAB000ALW DNA see document see document False 2012-02-29 ENCODE 2 ENCFF736BJY 12895312 ENCODE Processing Pipeline 8edd7baf199cd81624fbaf6859c81f7a https://www.encodeproject.org/files/ENCFF562CUC/@@download/ENCFF562CUC.bigBed GRCh38 released inconsistent platforms, low read length biological replicates with identical biosample ENCFF779ZST bed narrowPeak conservative idr thresholded peaks ENCSR000BRK ChIP-seq EFO:0002067 K562 cell line Homo sapiens TEAD4-human ENCAB000ALW DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF299QNM, ENCFF419RSJ, ENCFF736BJY, ENCFF841NBP 540415 ENCODE Processing Pipeline 136ebaa4e07d4e452ff77f4d52816a85 https://www.encodeproject.org/files/ENCFF779ZST/@@download/ENCFF779ZST.bed.gz GRCh38 released inconsistent platforms, low read length biological replicates with identical biosample ENCFF162KZS bigBed narrowPeak conservative idr thresholded peaks ENCSR000BRK ChIP-seq EFO:0002067 K562 cell line Homo sapiens TEAD4-human ENCAB000ALW DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF779ZST 1139415 ENCODE Processing Pipeline 5e65504a2f7228ebec1ed55ea8585d42 https://www.encodeproject.org/files/ENCFF162KZS/@@download/ENCFF162KZS.bigBed GRCh38 released inconsistent platforms, low read length biological replicates with identical biosample ENCFF547MLB bed narrowPeak optimal idr thresholded peaks ENCSR000BRK ChIP-seq EFO:0002067 K562 cell line Homo sapiens TEAD4-human ENCAB000ALW DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF299QNM, ENCFF419RSJ, ENCFF736BJY, ENCFF841NBP 632110 ENCODE Processing Pipeline 2b0ac9b8c1ad843bb00b47401296ab78 https://www.encodeproject.org/files/ENCFF547MLB/@@download/ENCFF547MLB.bed.gz GRCh38 released inconsistent platforms, low read length biological replicates with identical biosample ENCFF272TIX bigBed narrowPeak optimal idr thresholded peaks ENCSR000BRK ChIP-seq EFO:0002067 K562 cell line Homo sapiens TEAD4-human ENCAB000ALW DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF547MLB 1281040 ENCODE Processing Pipeline f8218c2d58a059dba4cbda6ad74fb4a8 https://www.encodeproject.org/files/ENCFF272TIX/@@download/ENCFF272TIX.bigBed GRCh38 released inconsistent platforms, low read length biological replicates with identical biosample ENCFF175UQQ bigWig signal p-value ENCSR000BRK ChIP-seq EFO:0002067 K562 cell line Homo sapiens TEAD4-human ENCAB000ALW DNA see document see document False 2012-02-29 ENCODE 1 ENCFF386SKS, ENCFF522HDC 597101417 ENCODE Processing Pipeline 1ae00a049690d2c35e8bdd73cf424234 https://www.encodeproject.org/files/ENCFF175UQQ/@@download/ENCFF175UQQ.bigWig hg19 released inconsistent platforms, low read length biological replicates with identical biosample ENCFF961DQD bigWig fold change over control ENCSR000BRK ChIP-seq EFO:0002067 K562 cell line Homo sapiens TEAD4-human ENCAB000ALW DNA see document see document False 2012-02-29 ENCODE 1 ENCFF386SKS, ENCFF522HDC 621323393 ENCODE Processing Pipeline 196114d2028bbc5b1c6110b20c724c59 https://www.encodeproject.org/files/ENCFF961DQD/@@download/ENCFF961DQD.bigWig hg19 released inconsistent platforms, low read length biological replicates with identical biosample ENCFF835OES bed narrowPeak peaks ENCSR000BRK ChIP-seq EFO:0002067 K562 cell line Homo sapiens TEAD4-human ENCAB000ALW DNA see document see document False 2012-02-29 ENCODE 2 ENCFF455XOX, ENCFF522HDC 6570249 ENCODE Processing Pipeline 212a2ff40851d7621a349d36fec6ab6d https://www.encodeproject.org/files/ENCFF835OES/@@download/ENCFF835OES.bed.gz hg19 released inconsistent platforms, low read length biological replicates with identical biosample ENCFF521AVU bigWig signal p-value ENCSR000BRK ChIP-seq EFO:0002067 K562 cell line Homo sapiens TEAD4-human ENCAB000ALW DNA see document see document False 2012-02-29 ENCODE 2 ENCFF455XOX, ENCFF522HDC 612860963 ENCODE Processing Pipeline 6fc9e998c245c64ad4b7378e68983b4c https://www.encodeproject.org/files/ENCFF521AVU/@@download/ENCFF521AVU.bigWig hg19 released inconsistent platforms, low read length biological replicates with identical biosample ENCFF318EUW bed narrowPeak peaks ENCSR000BRK ChIP-seq EFO:0002067 K562 cell line Homo sapiens TEAD4-human ENCAB000ALW DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF386SKS, ENCFF455XOX, ENCFF522HDC 6938675 ENCODE Processing Pipeline fe96b53d1e25772152725bf948eb7b36 https://www.encodeproject.org/files/ENCFF318EUW/@@download/ENCFF318EUW.bed.gz hg19 released inconsistent platforms, low read length biological replicates with identical biosample ENCFF929STX bigWig signal p-value ENCSR000BRK ChIP-seq EFO:0002067 K562 cell line Homo sapiens TEAD4-human ENCAB000ALW DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF386SKS, ENCFF455XOX, ENCFF522HDC 826408803 ENCODE Processing Pipeline dafeca1df136c371518db32b7872fdfb https://www.encodeproject.org/files/ENCFF929STX/@@download/ENCFF929STX.bigWig hg19 released inconsistent platforms, low read length biological replicates with identical biosample ENCFF104NCV bigBed narrowPeak peaks ENCSR000BRK ChIP-seq EFO:0002067 K562 cell line Homo sapiens TEAD4-human ENCAB000ALW DNA see document see document False 2012-02-29 ENCODE 2 ENCFF835OES 12897378 ENCODE Processing Pipeline 12e349b7df4807f213fbe0d56fb06432 https://www.encodeproject.org/files/ENCFF104NCV/@@download/ENCFF104NCV.bigBed hg19 released inconsistent platforms, low read length biological replicates with identical biosample ENCFF398ZBC bigBed narrowPeak peaks ENCSR000BRK ChIP-seq EFO:0002067 K562 cell line Homo sapiens TEAD4-human ENCAB000ALW DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF318EUW 13020619 ENCODE Processing Pipeline 8af48d1063b0e1b886cbc9f17e3d3f7c https://www.encodeproject.org/files/ENCFF398ZBC/@@download/ENCFF398ZBC.bigBed hg19 released inconsistent platforms, low read length biological replicates with identical biosample ENCFF740XZM bed narrowPeak peaks ENCSR000BRK ChIP-seq EFO:0002067 K562 cell line Homo sapiens TEAD4-human ENCAB000ALW DNA see document see document False 2012-02-29 ENCODE 1 ENCFF386SKS, ENCFF522HDC 6214545 ENCODE Processing Pipeline b15faa2477afa58c67eb3d8a2425d543 https://www.encodeproject.org/files/ENCFF740XZM/@@download/ENCFF740XZM.bed.gz hg19 released inconsistent platforms, low read length biological replicates with identical biosample ENCFF209MQX bed narrowPeak optimal idr thresholded peaks ENCSR000BRK ChIP-seq EFO:0002067 K562 cell line Homo sapiens TEAD4-human ENCAB000ALW DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF001TDO, ENCFF318EUW, ENCFF740XZM, ENCFF835OES 592931 ENCODE Processing Pipeline 445f3e8cab3b8f9e3271a2b0583cf90c https://www.encodeproject.org/files/ENCFF209MQX/@@download/ENCFF209MQX.bed.gz hg19 released inconsistent platforms, low read length biological replicates with identical biosample ENCFF857RDC bed narrowPeak conservative idr thresholded peaks ENCSR000BRK ChIP-seq EFO:0002067 K562 cell line Homo sapiens TEAD4-human ENCAB000ALW DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF001TDO, ENCFF318EUW, ENCFF740XZM, ENCFF835OES 509263 ENCODE Processing Pipeline 493088f7b36e0daf4243b2872459f712 https://www.encodeproject.org/files/ENCFF857RDC/@@download/ENCFF857RDC.bed.gz hg19 released inconsistent platforms, low read length biological replicates with identical biosample ENCFF907BVK bigBed narrowPeak conservative idr thresholded peaks ENCSR000BRK ChIP-seq EFO:0002067 K562 cell line Homo sapiens TEAD4-human ENCAB000ALW DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF857RDC 866552 ENCODE Processing Pipeline 2af754e913032a4ed256d59f520e06b2 https://www.encodeproject.org/files/ENCFF907BVK/@@download/ENCFF907BVK.bigBed hg19 released inconsistent platforms, low read length biological replicates with identical biosample ENCFF796QZZ bigWig fold change over control ENCSR000BRK ChIP-seq EFO:0002067 K562 cell line Homo sapiens TEAD4-human ENCAB000ALW DNA see document see document False 2012-02-29 ENCODE 2 ENCFF455XOX, ENCFF522HDC 666796849 ENCODE Processing Pipeline df9a14d64fa2a5326a4048f337b9bd63 https://www.encodeproject.org/files/ENCFF796QZZ/@@download/ENCFF796QZZ.bigWig hg19 released inconsistent platforms, low read length biological replicates with identical biosample ENCFF920AQK bigWig fold change over control ENCSR000BRK ChIP-seq EFO:0002067 K562 cell line Homo sapiens TEAD4-human ENCAB000ALW DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF386SKS, ENCFF455XOX, ENCFF522HDC 1011090514 ENCODE Processing Pipeline 3b86ef5e0dd348a18001326134865cf8 https://www.encodeproject.org/files/ENCFF920AQK/@@download/ENCFF920AQK.bigWig hg19 released inconsistent platforms, low read length biological replicates with identical biosample ENCFF295AFM bigBed narrowPeak peaks ENCSR000BRK ChIP-seq EFO:0002067 K562 cell line Homo sapiens TEAD4-human ENCAB000ALW DNA see document see document False 2012-02-29 ENCODE 1 ENCFF740XZM 13169435 ENCODE Processing Pipeline 6e8213325a2b803f0adbcb4f5a4b7227 https://www.encodeproject.org/files/ENCFF295AFM/@@download/ENCFF295AFM.bigBed hg19 released inconsistent platforms, low read length biological replicates with identical biosample ENCFF006JXW bigBed narrowPeak optimal idr thresholded peaks ENCSR000BRK ChIP-seq EFO:0002067 K562 cell line Homo sapiens TEAD4-human ENCAB000ALW DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF209MQX 1218631 ENCODE Processing Pipeline 9031e26ad94c151302d289658589349c https://www.encodeproject.org/files/ENCFF006JXW/@@download/ENCFF006JXW.bigBed hg19 released inconsistent platforms, low read length biological replicates with identical biosample ENCFF504ZSA fastq reads ENCSR030TJP ChIP-seq EFO:0002067 K562 cell line Homo sapiens DACH1-human ENCAB722HGQ DNA False 2018-01-26 ENCODE 2 1 100 paired-ended 2 ENCFF329ZRM 2737279461 Michael Snyder, Stanford 7438f8a1c19816da1b515f892d6f1247 https://www.encodeproject.org/files/ENCFF504ZSA/@@download/ENCFF504ZSA.fastq.gz Illumina HiSeq 2000 /files/ENCFF608MDV/ released experiment not submitted to GEO partially characterized antibody ENCFF402INY fastq reads ENCSR030TJP ChIP-seq EFO:0002067 K562 cell line Homo sapiens DACH1-human ENCAB722HGQ DNA False 2018-01-26 ENCODE 1 1 100 paired-ended 1 ENCFF340IWG 2105327071 Michael Snyder, Stanford 9d82e1a77195d3a555a4dd3c387aeb53 https://www.encodeproject.org/files/ENCFF402INY/@@download/ENCFF402INY.fastq.gz Illumina HiSeq 2000 /files/ENCFF410PHD/ released experiment not submitted to GEO partially characterized antibody ENCFF340IWG fastq reads ENCSR030TJP ChIP-seq EFO:0002067 K562 cell line Homo sapiens DACH1-human ENCAB722HGQ DNA False 2018-01-26 ENCODE 1 1 100 paired-ended 2 ENCFF402INY 2141895456 Michael Snyder, Stanford c4ef22542847c3c80540465e7d81cfaa https://www.encodeproject.org/files/ENCFF340IWG/@@download/ENCFF340IWG.fastq.gz Illumina HiSeq 2000 /files/ENCFF368UOC/ released experiment not submitted to GEO partially characterized antibody ENCFF329ZRM fastq reads ENCSR030TJP ChIP-seq EFO:0002067 K562 cell line Homo sapiens DACH1-human ENCAB722HGQ DNA False 2018-01-26 ENCODE 2 1 100 paired-ended 1 ENCFF504ZSA 2703185866 Michael Snyder, Stanford 0837f144bc8433af6cbee2ffdbbe58d5 https://www.encodeproject.org/files/ENCFF329ZRM/@@download/ENCFF329ZRM.fastq.gz Illumina HiSeq 2000 /files/ENCFF240DTE/ released experiment not submitted to GEO partially characterized antibody ENCFF168IPB bam unfiltered alignments ENCSR030TJP ChIP-seq EFO:0002067 K562 cell line Homo sapiens DACH1-human ENCAB722HGQ DNA False 2018-01-26 ENCODE 1 100 ENCFF340IWG, ENCFF402INY, ENCFF643CGH 4680229537 ENCODE Processing Pipeline 5088abcd2401a7a0cb1e8c8e7d666995 https://www.encodeproject.org/files/ENCFF168IPB/@@download/ENCFF168IPB.bam GRCh38 released experiment not submitted to GEO partially characterized antibody ENCFF789JOU bam unfiltered alignments ENCSR030TJP ChIP-seq EFO:0002067 K562 cell line Homo sapiens DACH1-human ENCAB722HGQ DNA False 2018-01-26 ENCODE 2 100 ENCFF329ZRM, ENCFF504ZSA, ENCFF807MUK 5847938045 ENCODE Processing Pipeline ebdb0454684b8cac11508997d0aa2f82 https://www.encodeproject.org/files/ENCFF789JOU/@@download/ENCFF789JOU.bam hg19 released experiment not submitted to GEO partially characterized antibody ENCFF563MIC bam unfiltered alignments ENCSR030TJP ChIP-seq EFO:0002067 K562 cell line Homo sapiens DACH1-human ENCAB722HGQ DNA False 2018-01-26 ENCODE 1 100 ENCFF340IWG, ENCFF402INY, ENCFF807MUK 4675671974 ENCODE Processing Pipeline 8698ef4c0425504848014e45cde675d9 https://www.encodeproject.org/files/ENCFF563MIC/@@download/ENCFF563MIC.bam hg19 released experiment not submitted to GEO partially characterized antibody ENCFF014CPX bam unfiltered alignments ENCSR030TJP ChIP-seq EFO:0002067 K562 cell line Homo sapiens DACH1-human ENCAB722HGQ DNA False 2018-01-26 ENCODE 2 100 ENCFF329ZRM, ENCFF504ZSA, ENCFF643CGH 5852962716 ENCODE Processing Pipeline 498eafae69926946ce539c9019eb0a91 https://www.encodeproject.org/files/ENCFF014CPX/@@download/ENCFF014CPX.bam GRCh38 released experiment not submitted to GEO partially characterized antibody ENCFF636ICA bam alignments ENCSR030TJP ChIP-seq EFO:0002067 K562 cell line Homo sapiens DACH1-human ENCAB722HGQ DNA False 2018-01-26 ENCODE 1 100 ENCFF340IWG, ENCFF402INY, ENCFF807MUK 3982115129 ENCODE Processing Pipeline b152e7dfa6411a1cfce94041cfdeed55 https://www.encodeproject.org/files/ENCFF636ICA/@@download/ENCFF636ICA.bam hg19 released experiment not submitted to GEO partially characterized antibody ENCFF521MLQ bam alignments ENCSR030TJP ChIP-seq EFO:0002067 K562 cell line Homo sapiens DACH1-human ENCAB722HGQ DNA False 2018-01-26 ENCODE 1 100 ENCFF340IWG, ENCFF402INY, ENCFF643CGH 3984373690 ENCODE Processing Pipeline ca1e3cc68633fb27cf765a3ca114a3c1 https://www.encodeproject.org/files/ENCFF521MLQ/@@download/ENCFF521MLQ.bam GRCh38 released experiment not submitted to GEO partially characterized antibody ENCFF764RCL bam alignments ENCSR030TJP ChIP-seq EFO:0002067 K562 cell line Homo sapiens DACH1-human ENCAB722HGQ DNA False 2018-01-26 ENCODE 2 100 ENCFF329ZRM, ENCFF504ZSA, ENCFF807MUK 4781370417 ENCODE Processing Pipeline 745dc29075624e53f39062ed4e97744e https://www.encodeproject.org/files/ENCFF764RCL/@@download/ENCFF764RCL.bam hg19 released experiment not submitted to GEO partially characterized antibody ENCFF804JSK bam alignments ENCSR030TJP ChIP-seq EFO:0002067 K562 cell line Homo sapiens DACH1-human ENCAB722HGQ DNA False 2018-01-26 ENCODE 2 100 ENCFF329ZRM, ENCFF504ZSA, ENCFF643CGH 4783866131 ENCODE Processing Pipeline 13bba08f5d3efae182df31f692a70bc7 https://www.encodeproject.org/files/ENCFF804JSK/@@download/ENCFF804JSK.bam GRCh38 released experiment not submitted to GEO partially characterized antibody ENCFF672VKU bigWig fold change over control ENCSR030TJP ChIP-seq EFO:0002067 K562 cell line Homo sapiens DACH1-human ENCAB722HGQ DNA False 2018-01-26 ENCODE 2 ENCFF262CJE, ENCFF506DFV, ENCFF764RCL 1372536780 ENCODE Processing Pipeline 3d1957235ddb2019e82bbbb726910df1 https://www.encodeproject.org/files/ENCFF672VKU/@@download/ENCFF672VKU.bigWig hg19 released experiment not submitted to GEO partially characterized antibody ENCFF527SRP bigWig fold change over control ENCSR030TJP ChIP-seq EFO:0002067 K562 cell line Homo sapiens DACH1-human ENCAB722HGQ DNA False 2018-01-26 ENCODE 1 ENCFF262CJE, ENCFF506DFV, ENCFF636ICA 1234951661 ENCODE Processing Pipeline 41ae791050c4babbf79debccb869fb50 https://www.encodeproject.org/files/ENCFF527SRP/@@download/ENCFF527SRP.bigWig hg19 released experiment not submitted to GEO partially characterized antibody ENCFF321YLF bigWig signal p-value ENCSR030TJP ChIP-seq EFO:0002067 K562 cell line Homo sapiens DACH1-human ENCAB722HGQ DNA False 2018-01-26 ENCODE 1, 2 ENCFF262CJE, ENCFF506DFV, ENCFF636ICA, ENCFF764RCL 1368067688 ENCODE Processing Pipeline a34af8024af9bc449eb8b7c0c2f37ac5 https://www.encodeproject.org/files/ENCFF321YLF/@@download/ENCFF321YLF.bigWig hg19 released experiment not submitted to GEO partially characterized antibody ENCFF086FIO bigBed narrowPeak peaks ENCSR030TJP ChIP-seq EFO:0002067 K562 cell line Homo sapiens DACH1-human ENCAB722HGQ DNA False 2018-01-26 ENCODE 2 ENCFF367IRL 11351002 ENCODE Processing Pipeline d61e0cd35c952d8a5a1fe776838c596a https://www.encodeproject.org/files/ENCFF086FIO/@@download/ENCFF086FIO.bigBed hg19 released experiment not submitted to GEO partially characterized antibody ENCFF123GAX bigBed narrowPeak peaks ENCSR030TJP ChIP-seq EFO:0002067 K562 cell line Homo sapiens DACH1-human ENCAB722HGQ DNA False 2018-01-26 ENCODE 1, 2 ENCFF876GAB 13333227 ENCODE Processing Pipeline f07a419e76e8d18440ad03b341a39369 https://www.encodeproject.org/files/ENCFF123GAX/@@download/ENCFF123GAX.bigBed hg19 released experiment not submitted to GEO partially characterized antibody ENCFF526HLP bed narrowPeak optimal idr thresholded peaks ENCSR030TJP ChIP-seq EFO:0002067 K562 cell line Homo sapiens DACH1-human ENCAB722HGQ DNA False 2018-01-26 ENCODE 1, 2 ENCFF001TDO, ENCFF218RDF, ENCFF367IRL, ENCFF876GAB 350462 ENCODE Processing Pipeline d0c60d91b1a0ec1fd66b2497426f4642 https://www.encodeproject.org/files/ENCFF526HLP/@@download/ENCFF526HLP.bed.gz hg19 released experiment not submitted to GEO partially characterized antibody ENCFF876GAB bed narrowPeak peaks ENCSR030TJP ChIP-seq EFO:0002067 K562 cell line Homo sapiens DACH1-human ENCAB722HGQ DNA False 2018-01-26 ENCODE 1, 2 ENCFF262CJE, ENCFF506DFV, ENCFF636ICA, ENCFF764RCL 7139116 ENCODE Processing Pipeline 6cc214c7e617c45b6d61e88d87a5bd2d https://www.encodeproject.org/files/ENCFF876GAB/@@download/ENCFF876GAB.bed.gz hg19 released experiment not submitted to GEO partially characterized antibody ENCFF709HXG bigBed narrowPeak conservative idr thresholded peaks ENCSR030TJP ChIP-seq EFO:0002067 K562 cell line Homo sapiens DACH1-human ENCAB722HGQ DNA False 2018-01-26 ENCODE 1, 2 ENCFF318UQW 554596 ENCODE Processing Pipeline 7901a54e8c5743b76ccb0d3bce33200c https://www.encodeproject.org/files/ENCFF709HXG/@@download/ENCFF709HXG.bigBed hg19 released experiment not submitted to GEO partially characterized antibody ENCFF279QVH bigBed narrowPeak optimal idr thresholded peaks ENCSR030TJP ChIP-seq EFO:0002067 K562 cell line Homo sapiens DACH1-human ENCAB722HGQ DNA False 2018-01-26 ENCODE 1, 2 ENCFF526HLP 635227 ENCODE Processing Pipeline 00cf58a5483e13d8cb157f28839bb08a https://www.encodeproject.org/files/ENCFF279QVH/@@download/ENCFF279QVH.bigBed hg19 released experiment not submitted to GEO partially characterized antibody ENCFF722VVM bigWig signal p-value ENCSR030TJP ChIP-seq EFO:0002067 K562 cell line Homo sapiens DACH1-human ENCAB722HGQ DNA False 2018-01-26 ENCODE 2 ENCFF262CJE, ENCFF506DFV, ENCFF764RCL 1397345103 ENCODE Processing Pipeline db2eb938c4ade2c249cb6a9629f0e41c https://www.encodeproject.org/files/ENCFF722VVM/@@download/ENCFF722VVM.bigWig hg19 released experiment not submitted to GEO partially characterized antibody ENCFF620DCM bigWig fold change over control ENCSR030TJP ChIP-seq EFO:0002067 K562 cell line Homo sapiens DACH1-human ENCAB722HGQ DNA False 2018-01-26 ENCODE 1, 2 ENCFF262CJE, ENCFF506DFV, ENCFF636ICA, ENCFF764RCL 1864692181 ENCODE Processing Pipeline f68d6dbd69699bef0d478040830c5a46 https://www.encodeproject.org/files/ENCFF620DCM/@@download/ENCFF620DCM.bigWig hg19 released experiment not submitted to GEO partially characterized antibody ENCFF318UQW bed narrowPeak conservative idr thresholded peaks ENCSR030TJP ChIP-seq EFO:0002067 K562 cell line Homo sapiens DACH1-human ENCAB722HGQ DNA False 2018-01-26 ENCODE 1, 2 ENCFF001TDO, ENCFF218RDF, ENCFF367IRL, ENCFF876GAB 290873 ENCODE Processing Pipeline ef998fad3e34ae81db0c3e4e02cb66f7 https://www.encodeproject.org/files/ENCFF318UQW/@@download/ENCFF318UQW.bed.gz hg19 released experiment not submitted to GEO partially characterized antibody ENCFF738UEL bigWig signal p-value ENCSR030TJP ChIP-seq EFO:0002067 K562 cell line Homo sapiens DACH1-human ENCAB722HGQ DNA False 2018-01-26 ENCODE 1 ENCFF262CJE, ENCFF506DFV, ENCFF636ICA 1258027531 ENCODE Processing Pipeline 3e26a61146f023fa62bbe94672fe4ba6 https://www.encodeproject.org/files/ENCFF738UEL/@@download/ENCFF738UEL.bigWig hg19 released experiment not submitted to GEO partially characterized antibody ENCFF218RDF bed narrowPeak peaks ENCSR030TJP ChIP-seq EFO:0002067 K562 cell line Homo sapiens DACH1-human ENCAB722HGQ DNA False 2018-01-26 ENCODE 1 ENCFF262CJE, ENCFF506DFV, ENCFF636ICA 6693826 ENCODE Processing Pipeline c2da8aa63a5dc6c33fc1f4bf1f310dd1 https://www.encodeproject.org/files/ENCFF218RDF/@@download/ENCFF218RDF.bed.gz hg19 released experiment not submitted to GEO partially characterized antibody ENCFF367IRL bed narrowPeak peaks ENCSR030TJP ChIP-seq EFO:0002067 K562 cell line Homo sapiens DACH1-human ENCAB722HGQ DNA False 2018-01-26 ENCODE 2 ENCFF262CJE, ENCFF506DFV, ENCFF764RCL 6638894 ENCODE Processing Pipeline 667ca9cb6a3cab61aeecbef471fef6e8 https://www.encodeproject.org/files/ENCFF367IRL/@@download/ENCFF367IRL.bed.gz hg19 released experiment not submitted to GEO partially characterized antibody ENCFF989OWQ bigBed narrowPeak peaks ENCSR030TJP ChIP-seq EFO:0002067 K562 cell line Homo sapiens DACH1-human ENCAB722HGQ DNA False 2018-01-26 ENCODE 1 ENCFF218RDF 13423332 ENCODE Processing Pipeline 8d5e183fa31bec9ae65362b3f9a957ae https://www.encodeproject.org/files/ENCFF989OWQ/@@download/ENCFF989OWQ.bigBed hg19 released experiment not submitted to GEO partially characterized antibody ENCFF662POB bigWig signal p-value ENCSR030TJP ChIP-seq EFO:0002067 K562 cell line Homo sapiens DACH1-human ENCAB722HGQ DNA False 2018-01-26 ENCODE 2 ENCFF720AUK, ENCFF796JTX, ENCFF804JSK 1282238889 ENCODE Processing Pipeline 06e4e8a560725120d36230fe81f20925 https://www.encodeproject.org/files/ENCFF662POB/@@download/ENCFF662POB.bigWig GRCh38 released experiment not submitted to GEO partially characterized antibody ENCFF408NGC bigWig fold change over control ENCSR030TJP ChIP-seq EFO:0002067 K562 cell line Homo sapiens DACH1-human ENCAB722HGQ DNA False 2018-01-26 ENCODE 2 ENCFF720AUK, ENCFF796JTX, ENCFF804JSK 1376147988 ENCODE Processing Pipeline 7c18fc24433f7cb5429903e56a404a20 https://www.encodeproject.org/files/ENCFF408NGC/@@download/ENCFF408NGC.bigWig GRCh38 released experiment not submitted to GEO partially characterized antibody ENCFF994LPG bigWig signal p-value ENCSR030TJP ChIP-seq EFO:0002067 K562 cell line Homo sapiens DACH1-human ENCAB722HGQ DNA False 2018-01-26 ENCODE 1 ENCFF521MLQ, ENCFF720AUK, ENCFF796JTX 1236241539 ENCODE Processing Pipeline 437707bdcde90f7d810bbc95671f91b7 https://www.encodeproject.org/files/ENCFF994LPG/@@download/ENCFF994LPG.bigWig GRCh38 released experiment not submitted to GEO partially characterized antibody ENCFF416WZD bigWig fold change over control ENCSR030TJP ChIP-seq EFO:0002067 K562 cell line Homo sapiens DACH1-human ENCAB722HGQ DNA False 2018-01-26 ENCODE 1 ENCFF521MLQ, ENCFF720AUK, ENCFF796JTX 1235132233 ENCODE Processing Pipeline 14dc2f08f8ae21faa052aa3f45ff33af https://www.encodeproject.org/files/ENCFF416WZD/@@download/ENCFF416WZD.bigWig GRCh38 released experiment not submitted to GEO partially characterized antibody ENCFF226ZWP bigWig fold change over control ENCSR030TJP ChIP-seq EFO:0002067 K562 cell line Homo sapiens DACH1-human ENCAB722HGQ DNA False 2018-01-26 ENCODE 1, 2 ENCFF521MLQ, ENCFF720AUK, ENCFF796JTX, ENCFF804JSK 1866974899 ENCODE Processing Pipeline 79179c4092e427f724384d92ca6a5c19 https://www.encodeproject.org/files/ENCFF226ZWP/@@download/ENCFF226ZWP.bigWig GRCh38 released experiment not submitted to GEO partially characterized antibody ENCFF864QQC bed narrowPeak peaks ENCSR030TJP ChIP-seq EFO:0002067 K562 cell line Homo sapiens DACH1-human ENCAB722HGQ DNA False 2018-01-26 ENCODE 1, 2 ENCFF521MLQ, ENCFF720AUK, ENCFF796JTX, ENCFF804JSK 7147928 ENCODE Processing Pipeline 26e5c4cbf109522b06f80550d3d302ac https://www.encodeproject.org/files/ENCFF864QQC/@@download/ENCFF864QQC.bed.gz GRCh38 released experiment not submitted to GEO partially characterized antibody ENCFF326QUT bed narrowPeak conservative idr thresholded peaks ENCSR030TJP ChIP-seq EFO:0002067 K562 cell line Homo sapiens DACH1-human ENCAB722HGQ DNA False 2018-01-26 ENCODE 1, 2 ENCFF419RSJ, ENCFF512HJR, ENCFF818IZF, ENCFF864QQC 293516 ENCODE Processing Pipeline a9e8decefa1bc7c9b533808ed9f1f55a https://www.encodeproject.org/files/ENCFF326QUT/@@download/ENCFF326QUT.bed.gz GRCh38 released experiment not submitted to GEO partially characterized antibody ENCFF870LJV bed narrowPeak optimal idr thresholded peaks ENCSR030TJP ChIP-seq EFO:0002067 K562 cell line Homo sapiens DACH1-human ENCAB722HGQ DNA False 2018-01-26 ENCODE 1, 2 ENCFF419RSJ, ENCFF512HJR, ENCFF818IZF, ENCFF864QQC 357631 ENCODE Processing Pipeline cc4bdc7c6047ac7deb40b54f6df8604d https://www.encodeproject.org/files/ENCFF870LJV/@@download/ENCFF870LJV.bed.gz GRCh38 released experiment not submitted to GEO partially characterized antibody ENCFF818IZF bed narrowPeak peaks ENCSR030TJP ChIP-seq EFO:0002067 K562 cell line Homo sapiens DACH1-human ENCAB722HGQ DNA False 2018-01-26 ENCODE 1 ENCFF521MLQ, ENCFF720AUK, ENCFF796JTX 6698476 ENCODE Processing Pipeline 52ea7b551cc50d07fc4679b891cade80 https://www.encodeproject.org/files/ENCFF818IZF/@@download/ENCFF818IZF.bed.gz GRCh38 released experiment not submitted to GEO partially characterized antibody ENCFF622OSN bigBed narrowPeak peaks ENCSR030TJP ChIP-seq EFO:0002067 K562 cell line Homo sapiens DACH1-human ENCAB722HGQ DNA False 2018-01-26 ENCODE 1 ENCFF818IZF 13438153 ENCODE Processing Pipeline a4f8f59ef9b659e866de8a3bb60e6c55 https://www.encodeproject.org/files/ENCFF622OSN/@@download/ENCFF622OSN.bigBed GRCh38 released experiment not submitted to GEO partially characterized antibody ENCFF507YBV bigWig signal p-value ENCSR030TJP ChIP-seq EFO:0002067 K562 cell line Homo sapiens DACH1-human ENCAB722HGQ DNA False 2018-01-26 ENCODE 1, 2 ENCFF521MLQ, ENCFF720AUK, ENCFF796JTX, ENCFF804JSK 1469102007 ENCODE Processing Pipeline 5650374b22c82aacf8c00b144002699d https://www.encodeproject.org/files/ENCFF507YBV/@@download/ENCFF507YBV.bigWig GRCh38 released experiment not submitted to GEO partially characterized antibody ENCFF330AWE bigBed narrowPeak conservative idr thresholded peaks ENCSR030TJP ChIP-seq EFO:0002067 K562 cell line Homo sapiens DACH1-human ENCAB722HGQ DNA False 2018-01-26 ENCODE 1, 2 ENCFF326QUT 560004 ENCODE Processing Pipeline 547ff1af38b86725aa1987093e25d2cb https://www.encodeproject.org/files/ENCFF330AWE/@@download/ENCFF330AWE.bigBed GRCh38 released experiment not submitted to GEO partially characterized antibody ENCFF055GXR bigBed narrowPeak peaks ENCSR030TJP ChIP-seq EFO:0002067 K562 cell line Homo sapiens DACH1-human ENCAB722HGQ DNA False 2018-01-26 ENCODE 1, 2 ENCFF864QQC 13348043 ENCODE Processing Pipeline 60f061c920322584e8e70f1d0e38672f https://www.encodeproject.org/files/ENCFF055GXR/@@download/ENCFF055GXR.bigBed GRCh38 released experiment not submitted to GEO partially characterized antibody ENCFF512HJR bed narrowPeak peaks ENCSR030TJP ChIP-seq EFO:0002067 K562 cell line Homo sapiens DACH1-human ENCAB722HGQ DNA False 2018-01-26 ENCODE 2 ENCFF720AUK, ENCFF796JTX, ENCFF804JSK 6647442 ENCODE Processing Pipeline 41d06797cd96fd2164538caf51a91554 https://www.encodeproject.org/files/ENCFF512HJR/@@download/ENCFF512HJR.bed.gz GRCh38 released experiment not submitted to GEO partially characterized antibody ENCFF119CMI bigBed narrowPeak optimal idr thresholded peaks ENCSR030TJP ChIP-seq EFO:0002067 K562 cell line Homo sapiens DACH1-human ENCAB722HGQ DNA False 2018-01-26 ENCODE 1, 2 ENCFF870LJV 646364 ENCODE Processing Pipeline ee8cad0a3dae50ed32464a4c7bfd212e https://www.encodeproject.org/files/ENCFF119CMI/@@download/ENCFF119CMI.bigBed GRCh38 released experiment not submitted to GEO partially characterized antibody ENCFF173GSO bigBed narrowPeak peaks ENCSR030TJP ChIP-seq EFO:0002067 K562 cell line Homo sapiens DACH1-human ENCAB722HGQ DNA False 2018-01-26 ENCODE 2 ENCFF512HJR 11370410 ENCODE Processing Pipeline ba483ce51275e094bbe548d4a12348c5 https://www.encodeproject.org/files/ENCFF173GSO/@@download/ENCFF173GSO.bigBed GRCh38 released experiment not submitted to GEO partially characterized antibody ENCFF453JCJ fastq reads ENCSR822LBD ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBFOX2-human ENCAB592TEY DNA SDS formaldehyde False 2017-02-27 ENCODE 2 1 40 single-ended 998936310 Xiang-Dong Fu, UCSD 00610c595947ac92ed460b76c4a251e1 SRA:SRR6214016 https://www.encodeproject.org/files/ENCFF453JCJ/@@download/ENCFF453JCJ.fastq.gz Illumina HiSeq 2000 /files/ENCFF092DDZ/ released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF150BYW fastq reads ENCSR822LBD ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBFOX2-human ENCAB592TEY DNA SDS formaldehyde False 2017-02-27 ENCODE 1 1 40 single-ended 841825318 Xiang-Dong Fu, UCSD f5bd16a926a83c8869632b7099a58a3d SRA:SRR6214017 https://www.encodeproject.org/files/ENCFF150BYW/@@download/ENCFF150BYW.fastq.gz Illumina HiSeq 2000 /files/ENCFF510UAH/ released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF192IAK bam unfiltered alignments ENCSR822LBD ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBFOX2-human ENCAB592TEY DNA SDS formaldehyde False 2017-02-27 ENCODE 1 40 ENCFF150BYW, ENCFF807MUK 913628695 ENCODE Processing Pipeline e43045dfa5468e7d58c07e84733c0122 https://www.encodeproject.org/files/ENCFF192IAK/@@download/ENCFF192IAK.bam hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF938LDN bam alignments ENCSR822LBD ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBFOX2-human ENCAB592TEY DNA SDS formaldehyde False 2017-02-27 ENCODE 1 40 ENCFF150BYW, ENCFF807MUK 441518031 ENCODE Processing Pipeline 3a1226ff89ef3b357bcf1fca50d503bf https://www.encodeproject.org/files/ENCFF938LDN/@@download/ENCFF938LDN.bam hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF161VHM bam alignments ENCSR822LBD ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBFOX2-human ENCAB592TEY DNA SDS formaldehyde False 2017-02-27 ENCODE 1 40 ENCFF150BYW, ENCFF643CGH 440831033 ENCODE Processing Pipeline e38139e11bcec72e29c8df8f4d43f429 https://www.encodeproject.org/files/ENCFF161VHM/@@download/ENCFF161VHM.bam GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF425VIX bam alignments ENCSR822LBD ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBFOX2-human ENCAB592TEY DNA SDS formaldehyde False 2017-02-27 ENCODE 2 40 ENCFF453JCJ, ENCFF807MUK 500780765 ENCODE Processing Pipeline df56c2786639b77d9c1414945c8d794b https://www.encodeproject.org/files/ENCFF425VIX/@@download/ENCFF425VIX.bam hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF247OHX bam unfiltered alignments ENCSR822LBD ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBFOX2-human ENCAB592TEY DNA SDS formaldehyde False 2017-02-27 ENCODE 2 40 ENCFF453JCJ, ENCFF643CGH 1072038300 ENCODE Processing Pipeline 0e8cb37db36f099b7c0dbf961f83145e https://www.encodeproject.org/files/ENCFF247OHX/@@download/ENCFF247OHX.bam GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF156OFZ bam alignments ENCSR822LBD ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBFOX2-human ENCAB592TEY DNA SDS formaldehyde False 2017-02-27 ENCODE 2 40 ENCFF453JCJ, ENCFF643CGH 500002236 ENCODE Processing Pipeline 063219ec05cabe6e16a9716e0871010c https://www.encodeproject.org/files/ENCFF156OFZ/@@download/ENCFF156OFZ.bam GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF520WLS bam unfiltered alignments ENCSR822LBD ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBFOX2-human ENCAB592TEY DNA SDS formaldehyde False 2017-02-27 ENCODE 1 40 ENCFF150BYW, ENCFF643CGH 913790128 ENCODE Processing Pipeline 85d3b2612785ce28187e8a5f8bb48e6a https://www.encodeproject.org/files/ENCFF520WLS/@@download/ENCFF520WLS.bam GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF570RKI bam unfiltered alignments ENCSR822LBD ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBFOX2-human ENCAB592TEY DNA SDS formaldehyde False 2017-02-27 ENCODE 2 40 ENCFF453JCJ, ENCFF807MUK 1071874374 ENCODE Processing Pipeline 861eac3c9aeacffd9b7c88984d069db8 https://www.encodeproject.org/files/ENCFF570RKI/@@download/ENCFF570RKI.bam hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF189IDV bigWig fold change over control ENCSR822LBD ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBFOX2-human ENCAB592TEY DNA SDS formaldehyde False 2017-02-27 ENCODE 1 ENCFF508DBG, ENCFF938LDN 264239776 ENCODE Processing Pipeline 09b632c3b684dacd7bd200cfa0d7b752 https://www.encodeproject.org/files/ENCFF189IDV/@@download/ENCFF189IDV.bigWig hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF155BGN bigWig signal p-value ENCSR822LBD ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBFOX2-human ENCAB592TEY DNA SDS formaldehyde False 2017-02-27 ENCODE 1 ENCFF508DBG, ENCFF938LDN 474473769 ENCODE Processing Pipeline 791f9b1f70f013ad609a49c40a5a529b https://www.encodeproject.org/files/ENCFF155BGN/@@download/ENCFF155BGN.bigWig hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF938QBJ bigWig signal p-value ENCSR822LBD ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBFOX2-human ENCAB592TEY DNA SDS formaldehyde False 2017-02-27 ENCODE 2 ENCFF425VIX, ENCFF572OMD 466422790 ENCODE Processing Pipeline 7a4ef83f193591700d998a5f277739e5 https://www.encodeproject.org/files/ENCFF938QBJ/@@download/ENCFF938QBJ.bigWig hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF443CVW bigWig signal p-value ENCSR822LBD ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBFOX2-human ENCAB592TEY DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF425VIX, ENCFF508DBG, ENCFF572OMD, ENCFF938LDN 818121284 ENCODE Processing Pipeline 025a314b9d5b89a5542ea035c86573ac https://www.encodeproject.org/files/ENCFF443CVW/@@download/ENCFF443CVW.bigWig hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF979NUD bigWig fold change over control ENCSR822LBD ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBFOX2-human ENCAB592TEY DNA SDS formaldehyde False 2017-02-27 ENCODE 2 ENCFF425VIX, ENCFF572OMD 280975252 ENCODE Processing Pipeline a047bc66c45332caf67280782aae5eee https://www.encodeproject.org/files/ENCFF979NUD/@@download/ENCFF979NUD.bigWig hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF600MKI bigWig fold change over control ENCSR822LBD ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBFOX2-human ENCAB592TEY DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF425VIX, ENCFF508DBG, ENCFF572OMD, ENCFF938LDN 587181655 ENCODE Processing Pipeline 089895170be62efd853ef7fd1e344769 https://www.encodeproject.org/files/ENCFF600MKI/@@download/ENCFF600MKI.bigWig hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF470QLV bed narrowPeak peaks ENCSR822LBD ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBFOX2-human ENCAB592TEY DNA SDS formaldehyde False 2017-02-27 ENCODE 1 ENCFF508DBG, ENCFF938LDN 6177835 ENCODE Processing Pipeline 9736c4051e5dd11f89ca06ed8d8caf4f https://www.encodeproject.org/files/ENCFF470QLV/@@download/ENCFF470QLV.bed.gz hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF309FGP bed narrowPeak peaks ENCSR822LBD ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBFOX2-human ENCAB592TEY DNA SDS formaldehyde False 2017-02-27 ENCODE 2 ENCFF425VIX, ENCFF572OMD 6445090 ENCODE Processing Pipeline 644311b48adc7dac81b450b4c99dcd2a https://www.encodeproject.org/files/ENCFF309FGP/@@download/ENCFF309FGP.bed.gz hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF027DFU bigBed narrowPeak peaks ENCSR822LBD ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBFOX2-human ENCAB592TEY DNA SDS formaldehyde False 2017-02-27 ENCODE 1 ENCFF470QLV 11210309 ENCODE Processing Pipeline bd5428eec8cf479f7d3bdc96ce37d9c9 https://www.encodeproject.org/files/ENCFF027DFU/@@download/ENCFF027DFU.bigBed hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF590JZV bed narrowPeak peaks ENCSR822LBD ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBFOX2-human ENCAB592TEY DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF425VIX, ENCFF508DBG, ENCFF572OMD, ENCFF938LDN 6884691 ENCODE Processing Pipeline abfba4d54cd4c4594f984e6b7e6faa60 https://www.encodeproject.org/files/ENCFF590JZV/@@download/ENCFF590JZV.bed.gz hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF028KSH bigBed narrowPeak peaks ENCSR822LBD ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBFOX2-human ENCAB592TEY DNA SDS formaldehyde False 2017-02-27 ENCODE 2 ENCFF309FGP 11641887 ENCODE Processing Pipeline 5048c16837b4e8fe75c3aa0424443c44 https://www.encodeproject.org/files/ENCFF028KSH/@@download/ENCFF028KSH.bigBed hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF677XMK bigBed narrowPeak conservative idr thresholded peaks ENCSR822LBD ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBFOX2-human ENCAB592TEY DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF140GXH 1854745 ENCODE Processing Pipeline 2ecc42fff66f6fc0fb11ea47376a74e8 https://www.encodeproject.org/files/ENCFF677XMK/@@download/ENCFF677XMK.bigBed hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF120IDE bed narrowPeak optimal idr thresholded peaks ENCSR822LBD ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBFOX2-human ENCAB592TEY DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF001TDO, ENCFF309FGP, ENCFF470QLV, ENCFF590JZV 998359 ENCODE Processing Pipeline 4362859aa12a3ba4328a7931a50d40a3 https://www.encodeproject.org/files/ENCFF120IDE/@@download/ENCFF120IDE.bed.gz hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF758FDS bigBed narrowPeak peaks ENCSR822LBD ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBFOX2-human ENCAB592TEY DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF590JZV 11366294 ENCODE Processing Pipeline 891b8cb7f6b2c7e29542d51010a4afbf https://www.encodeproject.org/files/ENCFF758FDS/@@download/ENCFF758FDS.bigBed hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF140GXH bed narrowPeak conservative idr thresholded peaks ENCSR822LBD ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBFOX2-human ENCAB592TEY DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF001TDO, ENCFF309FGP, ENCFF470QLV, ENCFF590JZV 965464 ENCODE Processing Pipeline 82ae211d0d3c247200976490a490027a https://www.encodeproject.org/files/ENCFF140GXH/@@download/ENCFF140GXH.bed.gz hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF450WHV bigBed narrowPeak optimal idr thresholded peaks ENCSR822LBD ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBFOX2-human ENCAB592TEY DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF120IDE 1909271 ENCODE Processing Pipeline 1e22ddfacc4e4647d270d385ea9c1690 https://www.encodeproject.org/files/ENCFF450WHV/@@download/ENCFF450WHV.bigBed hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF384XHS bigWig signal p-value ENCSR822LBD ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBFOX2-human ENCAB592TEY DNA SDS formaldehyde False 2017-02-27 ENCODE 2 ENCFF100PTE, ENCFF156OFZ 452783057 ENCODE Processing Pipeline 9fc67fef57df5a55ad839a0054ffccc5 https://www.encodeproject.org/files/ENCFF384XHS/@@download/ENCFF384XHS.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF985IJP bigWig fold change over control ENCSR822LBD ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBFOX2-human ENCAB592TEY DNA SDS formaldehyde False 2017-02-27 ENCODE 1 ENCFF161VHM, ENCFF721LZU 263175625 ENCODE Processing Pipeline a84e75e55cbb66028d3372ded7189532 https://www.encodeproject.org/files/ENCFF985IJP/@@download/ENCFF985IJP.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF294HYU bed narrowPeak peaks ENCSR822LBD ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBFOX2-human ENCAB592TEY DNA SDS formaldehyde False 2017-02-27 ENCODE 1 ENCFF161VHM, ENCFF721LZU 6172518 ENCODE Processing Pipeline bc5ae1fb5a55e00078598f6e4d790e9e https://www.encodeproject.org/files/ENCFF294HYU/@@download/ENCFF294HYU.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF825HZH bigBed narrowPeak peaks ENCSR822LBD ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBFOX2-human ENCAB592TEY DNA SDS formaldehyde False 2017-02-27 ENCODE 1 ENCFF294HYU 11206142 ENCODE Processing Pipeline 832a8b436af0d93c725ce4492b7e959c https://www.encodeproject.org/files/ENCFF825HZH/@@download/ENCFF825HZH.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF834PRZ bed narrowPeak conservative idr thresholded peaks ENCSR822LBD ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBFOX2-human ENCAB592TEY DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF102HGA, ENCFF294HYU, ENCFF314GFC, ENCFF419RSJ 971020 ENCODE Processing Pipeline 5eb30b5a4c1736d1a07a9d3d7415f6f5 https://www.encodeproject.org/files/ENCFF834PRZ/@@download/ENCFF834PRZ.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF908TUZ bigWig signal p-value ENCSR822LBD ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBFOX2-human ENCAB592TEY DNA SDS formaldehyde False 2017-02-27 ENCODE 1 ENCFF161VHM, ENCFF721LZU 518492681 ENCODE Processing Pipeline dde393398c7a5518918f11447e187fb8 https://www.encodeproject.org/files/ENCFF908TUZ/@@download/ENCFF908TUZ.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF782SMH bigBed narrowPeak peaks ENCSR822LBD ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBFOX2-human ENCAB592TEY DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF102HGA 11534695 ENCODE Processing Pipeline c18a4b55fd4f6baf9a4532038d544895 https://www.encodeproject.org/files/ENCFF782SMH/@@download/ENCFF782SMH.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF206PDH bigWig signal p-value ENCSR822LBD ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBFOX2-human ENCAB592TEY DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF100PTE, ENCFF156OFZ, ENCFF161VHM, ENCFF721LZU 874326249 ENCODE Processing Pipeline 8b8c6a53dcff014faf0cd2d6578873b7 https://www.encodeproject.org/files/ENCFF206PDH/@@download/ENCFF206PDH.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF240ELJ bigWig fold change over control ENCSR822LBD ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBFOX2-human ENCAB592TEY DNA SDS formaldehyde False 2017-02-27 ENCODE 2 ENCFF100PTE, ENCFF156OFZ 283198280 ENCODE Processing Pipeline 3dc8aea4f9922416536f7410e7713974 https://www.encodeproject.org/files/ENCFF240ELJ/@@download/ENCFF240ELJ.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF051NQJ bigWig fold change over control ENCSR822LBD ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBFOX2-human ENCAB592TEY DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF100PTE, ENCFF156OFZ, ENCFF161VHM, ENCFF721LZU 595207880 ENCODE Processing Pipeline 8f4b19390502bdfd1631327b60373144 https://www.encodeproject.org/files/ENCFF051NQJ/@@download/ENCFF051NQJ.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF102HGA bed narrowPeak peaks ENCSR822LBD ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBFOX2-human ENCAB592TEY DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF100PTE, ENCFF156OFZ, ENCFF161VHM, ENCFF721LZU 7008952 ENCODE Processing Pipeline 930e93467373cc9939e425924319e43c https://www.encodeproject.org/files/ENCFF102HGA/@@download/ENCFF102HGA.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF196WTG bigBed narrowPeak optimal idr thresholded peaks ENCSR822LBD ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBFOX2-human ENCAB592TEY DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF232ASB 1933103 ENCODE Processing Pipeline 0e51c4d520b2cc4aff66f03f05be370e https://www.encodeproject.org/files/ENCFF196WTG/@@download/ENCFF196WTG.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF793LSM bigBed narrowPeak conservative idr thresholded peaks ENCSR822LBD ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBFOX2-human ENCAB592TEY DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF834PRZ 1871631 ENCODE Processing Pipeline 5b81f185c54439508ba1e3a0e643546a https://www.encodeproject.org/files/ENCFF793LSM/@@download/ENCFF793LSM.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF232ASB bed narrowPeak optimal idr thresholded peaks ENCSR822LBD ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBFOX2-human ENCAB592TEY DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF102HGA, ENCFF294HYU, ENCFF314GFC, ENCFF419RSJ 1008580 ENCODE Processing Pipeline 6fb75ec10500be4f9a09c1ff700835b7 https://www.encodeproject.org/files/ENCFF232ASB/@@download/ENCFF232ASB.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF314GFC bed narrowPeak peaks ENCSR822LBD ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBFOX2-human ENCAB592TEY DNA SDS formaldehyde False 2017-02-27 ENCODE 2 ENCFF100PTE, ENCFF156OFZ 6433897 ENCODE Processing Pipeline 61b8884f72c94af212cc5f4b25c81422 https://www.encodeproject.org/files/ENCFF314GFC/@@download/ENCFF314GFC.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF806OQG bigBed narrowPeak peaks ENCSR822LBD ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBFOX2-human ENCAB592TEY DNA SDS formaldehyde False 2017-02-27 ENCODE 2 ENCFF314GFC 11633098 ENCODE Processing Pipeline 4e34f3b4abb90a580c2b746882fcc612 https://www.encodeproject.org/files/ENCFF806OQG/@@download/ENCFF806OQG.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF219FRB bam unfiltered alignments ENCSR439OCL ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF407-human ENCAB019LBH DNA False 2018-01-26 ENCODE 1 100 ENCFF065DPP, ENCFF645KUF, ENCFF807MUK 5555793747 ENCODE Processing Pipeline 6f97983ac45f3b34b847939e5674d281 https://www.encodeproject.org/files/ENCFF219FRB/@@download/ENCFF219FRB.bam hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF122RDI bam unfiltered alignments ENCSR439OCL ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF407-human ENCAB019LBH DNA False 2018-01-26 ENCODE 2 100 ENCFF202KVA, ENCFF235SEI, ENCFF807MUK 4652650681 ENCODE Processing Pipeline ff37a625f6ba3495343b528e2eeb77d8 https://www.encodeproject.org/files/ENCFF122RDI/@@download/ENCFF122RDI.bam hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF065DPP fastq reads ENCSR439OCL ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF407-human ENCAB019LBH DNA False 2018-01-26 ENCODE 1 1 100 paired-ended 2 ENCFF645KUF 2561056894 Michael Snyder, Stanford 1c2f7b55347f91c165866830b3d3504e https://www.encodeproject.org/files/ENCFF065DPP/@@download/ENCFF065DPP.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFH/ released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF235SEI fastq reads ENCSR439OCL ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF407-human ENCAB019LBH DNA False 2018-01-26 ENCODE 2 1 100 paired-ended 2 ENCFF202KVA 2159411891 Michael Snyder, Stanford 63f8938612fac356fcbf7a2a35696708 https://www.encodeproject.org/files/ENCFF235SEI/@@download/ENCFF235SEI.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFA/ released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF202KVA fastq reads ENCSR439OCL ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF407-human ENCAB019LBH DNA False 2018-01-26 ENCODE 2 1 100 paired-ended 1 ENCFF235SEI 2126910940 Michael Snyder, Stanford 1b9ed62c64bb9daad5fa4e875e20bbb0 https://www.encodeproject.org/files/ENCFF202KVA/@@download/ENCFF202KVA.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFD/ released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF645KUF fastq reads ENCSR439OCL ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF407-human ENCAB019LBH DNA False 2018-01-26 ENCODE 1 1 100 paired-ended 1 ENCFF065DPP 2527869810 Michael Snyder, Stanford 9d017e49c5ab2108a95ab5dcaa42958b https://www.encodeproject.org/files/ENCFF645KUF/@@download/ENCFF645KUF.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFF/ released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF778YDK bam alignments ENCSR439OCL ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF407-human ENCAB019LBH DNA False 2018-01-26 ENCODE 2 100 ENCFF202KVA, ENCFF235SEI, ENCFF807MUK 3570282680 ENCODE Processing Pipeline fef9a289fb2df975e9cf017a4842893f https://www.encodeproject.org/files/ENCFF778YDK/@@download/ENCFF778YDK.bam hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF456JRF bam alignments ENCSR439OCL ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF407-human ENCAB019LBH DNA False 2018-01-26 ENCODE 1 100 ENCFF065DPP, ENCFF645KUF, ENCFF807MUK 4420752107 ENCODE Processing Pipeline 0c850b1a42473855c28d5be4827f03d9 https://www.encodeproject.org/files/ENCFF456JRF/@@download/ENCFF456JRF.bam hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF914IRY bigWig signal p-value ENCSR439OCL ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF407-human ENCAB019LBH DNA False 2018-01-26 ENCODE 1 ENCFF456JRF, ENCFF581ZJL 1157350720 ENCODE Processing Pipeline c59aad23aa8f3158baaba002c4259610 https://www.encodeproject.org/files/ENCFF914IRY/@@download/ENCFF914IRY.bigWig hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF663ULO bigWig signal p-value ENCSR439OCL ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF407-human ENCAB019LBH DNA False 2018-01-26 ENCODE 2 ENCFF051LWI, ENCFF778YDK 904876019 ENCODE Processing Pipeline fd804c09439c7c4a6a27f11c401128a0 https://www.encodeproject.org/files/ENCFF663ULO/@@download/ENCFF663ULO.bigWig hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF236SRK bigWig signal p-value ENCSR439OCL ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF407-human ENCAB019LBH DNA False 2018-01-26 ENCODE 1, 2 ENCFF051LWI, ENCFF456JRF, ENCFF581ZJL, ENCFF778YDK 1751292934 ENCODE Processing Pipeline 528fdf8b595cc34a478b0ba2ce0bff07 https://www.encodeproject.org/files/ENCFF236SRK/@@download/ENCFF236SRK.bigWig hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF333BEH bigWig fold change over control ENCSR439OCL ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF407-human ENCAB019LBH DNA False 2018-01-26 ENCODE 1 ENCFF456JRF, ENCFF581ZJL 1157697112 ENCODE Processing Pipeline b0066affc94aae3db103cd84c8fca889 https://www.encodeproject.org/files/ENCFF333BEH/@@download/ENCFF333BEH.bigWig hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF907XKD bigWig fold change over control ENCSR439OCL ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF407-human ENCAB019LBH DNA False 2018-01-26 ENCODE 2 ENCFF051LWI, ENCFF778YDK 1000767926 ENCODE Processing Pipeline 6d6fdfa48c874aa33d1d613f35bcf0a0 https://www.encodeproject.org/files/ENCFF907XKD/@@download/ENCFF907XKD.bigWig hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF177OYI bigWig fold change over control ENCSR439OCL ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF407-human ENCAB019LBH DNA False 2018-01-26 ENCODE 1, 2 ENCFF051LWI, ENCFF456JRF, ENCFF581ZJL, ENCFF778YDK 1983877603 ENCODE Processing Pipeline c77df4862e3b92c62f929c6008728d33 https://www.encodeproject.org/files/ENCFF177OYI/@@download/ENCFF177OYI.bigWig hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF013YBA bed narrowPeak peaks ENCSR439OCL ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF407-human ENCAB019LBH DNA False 2018-01-26 ENCODE 1, 2 ENCFF051LWI, ENCFF456JRF, ENCFF581ZJL, ENCFF778YDK 7163683 ENCODE Processing Pipeline b14cdfadd7542923ecfed201b86fd87f https://www.encodeproject.org/files/ENCFF013YBA/@@download/ENCFF013YBA.bed.gz hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF858SYW bed narrowPeak peaks ENCSR439OCL ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF407-human ENCAB019LBH DNA False 2018-01-26 ENCODE 2 ENCFF051LWI, ENCFF778YDK 6557419 ENCODE Processing Pipeline 029d2e306bb7105473f65d2e1499a70e https://www.encodeproject.org/files/ENCFF858SYW/@@download/ENCFF858SYW.bed.gz hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF197HUM bed narrowPeak peaks ENCSR439OCL ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF407-human ENCAB019LBH DNA False 2018-01-26 ENCODE 1 ENCFF456JRF, ENCFF581ZJL 6595225 ENCODE Processing Pipeline 314fa2ec3f2fc8d3c666dddc9f99c89b https://www.encodeproject.org/files/ENCFF197HUM/@@download/ENCFF197HUM.bed.gz hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF291SXL bigBed narrowPeak peaks ENCSR439OCL ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF407-human ENCAB019LBH DNA False 2018-01-26 ENCODE 1 ENCFF197HUM 11074806 ENCODE Processing Pipeline afd8c7044379b30d8892cd3ebc5afb4c https://www.encodeproject.org/files/ENCFF291SXL/@@download/ENCFF291SXL.bigBed hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF094VRL bigBed narrowPeak peaks ENCSR439OCL ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF407-human ENCAB019LBH DNA False 2018-01-26 ENCODE 2 ENCFF858SYW 13273344 ENCODE Processing Pipeline 97d3d8f0a6968f0f4f9e8f664583fda5 https://www.encodeproject.org/files/ENCFF094VRL/@@download/ENCFF094VRL.bigBed hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF878SJP bigBed narrowPeak peaks ENCSR439OCL ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF407-human ENCAB019LBH DNA False 2018-01-26 ENCODE 1, 2 ENCFF013YBA 13123334 ENCODE Processing Pipeline 2bc0291899d873b9cc65c7fdb26245fb https://www.encodeproject.org/files/ENCFF878SJP/@@download/ENCFF878SJP.bigBed hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF478DQU bed narrowPeak conservative idr thresholded peaks ENCSR439OCL ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF407-human ENCAB019LBH DNA False 2018-01-26 ENCODE 1, 2 ENCFF001TDO, ENCFF013YBA, ENCFF197HUM, ENCFF858SYW 56353 ENCODE Processing Pipeline cc77e5917106976df3d3ee5f2638e886 https://www.encodeproject.org/files/ENCFF478DQU/@@download/ENCFF478DQU.bed.gz hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF932UEC bed narrowPeak optimal idr thresholded peaks ENCSR439OCL ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF407-human ENCAB019LBH DNA False 2018-01-26 ENCODE 1, 2 ENCFF001TDO, ENCFF013YBA, ENCFF197HUM, ENCFF858SYW 69547 ENCODE Processing Pipeline 59e0cbc48512175f74a3919e0576ad96 https://www.encodeproject.org/files/ENCFF932UEC/@@download/ENCFF932UEC.bed.gz hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF853HAR bigBed narrowPeak conservative idr thresholded peaks ENCSR439OCL ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF407-human ENCAB019LBH DNA False 2018-01-26 ENCODE 1, 2 ENCFF478DQU 149457 ENCODE Processing Pipeline 6533de397deba3ca1c52024d6365d2d0 https://www.encodeproject.org/files/ENCFF853HAR/@@download/ENCFF853HAR.bigBed hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF881HWZ bigBed narrowPeak optimal idr thresholded peaks ENCSR439OCL ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF407-human ENCAB019LBH DNA False 2018-01-26 ENCODE 1, 2 ENCFF932UEC 203940 ENCODE Processing Pipeline fea4ad456ac26443f2e8f127e14c1f71 https://www.encodeproject.org/files/ENCFF881HWZ/@@download/ENCFF881HWZ.bigBed hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF413DVA bam unfiltered alignments ENCSR439OCL ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF407-human ENCAB019LBH DNA False 2018-01-26 ENCODE 2 100 ENCFF202KVA, ENCFF235SEI, ENCFF643CGH 4655002395 ENCODE Processing Pipeline 4d1233f1c628361a9c409d4bdc8df8c5 https://www.encodeproject.org/files/ENCFF413DVA/@@download/ENCFF413DVA.bam GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF655NYQ bam unfiltered alignments ENCSR439OCL ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF407-human ENCAB019LBH DNA False 2018-01-26 ENCODE 1 100 ENCFF065DPP, ENCFF643CGH, ENCFF645KUF 5560104878 ENCODE Processing Pipeline d99c8c25a6b74e6daadaa3c39b627248 https://www.encodeproject.org/files/ENCFF655NYQ/@@download/ENCFF655NYQ.bam GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF951IVR bam alignments ENCSR439OCL ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF407-human ENCAB019LBH DNA False 2018-01-26 ENCODE 2 100 ENCFF202KVA, ENCFF235SEI, ENCFF643CGH 3573709764 ENCODE Processing Pipeline df045325f473e7d783afdeae76b83e19 https://www.encodeproject.org/files/ENCFF951IVR/@@download/ENCFF951IVR.bam GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF410WYJ bam alignments ENCSR439OCL ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF407-human ENCAB019LBH DNA False 2018-01-26 ENCODE 1 100 ENCFF065DPP, ENCFF643CGH, ENCFF645KUF 4424574638 ENCODE Processing Pipeline 4e88fb8993ff97c2e3b85fea150a9d03 https://www.encodeproject.org/files/ENCFF410WYJ/@@download/ENCFF410WYJ.bam GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF711LKW bigWig signal p-value ENCSR439OCL ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF407-human ENCAB019LBH DNA False 2018-01-26 ENCODE 1 ENCFF410WYJ, ENCFF910IKB 1079913363 ENCODE Processing Pipeline 455fc350468e95804f5b8a0a14cab609 https://www.encodeproject.org/files/ENCFF711LKW/@@download/ENCFF711LKW.bigWig GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF583FJT bigWig signal p-value ENCSR439OCL ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF407-human ENCAB019LBH DNA False 2018-01-26 ENCODE 2 ENCFF227IZS, ENCFF951IVR 896630061 ENCODE Processing Pipeline 0126f36a5f797dd91da6a63aa821944b https://www.encodeproject.org/files/ENCFF583FJT/@@download/ENCFF583FJT.bigWig GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF958GOG bigWig signal p-value ENCSR439OCL ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF407-human ENCAB019LBH DNA False 2018-01-26 ENCODE 1, 2 ENCFF227IZS, ENCFF410WYJ, ENCFF910IKB, ENCFF951IVR 1933711090 ENCODE Processing Pipeline e65b3e11a81d78b4a4267c104f80ce03 https://www.encodeproject.org/files/ENCFF958GOG/@@download/ENCFF958GOG.bigWig GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF373QMV bigWig fold change over control ENCSR439OCL ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF407-human ENCAB019LBH DNA False 2018-01-26 ENCODE 1 ENCFF410WYJ, ENCFF910IKB 1200339792 ENCODE Processing Pipeline 48e631181f48c4882d5f75379044e4f0 https://www.encodeproject.org/files/ENCFF373QMV/@@download/ENCFF373QMV.bigWig GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF706WKL bigWig fold change over control ENCSR439OCL ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF407-human ENCAB019LBH DNA False 2018-01-26 ENCODE 2 ENCFF227IZS, ENCFF951IVR 987042665 ENCODE Processing Pipeline f8f7d3bee904283b3095f4e7d575b9e7 https://www.encodeproject.org/files/ENCFF706WKL/@@download/ENCFF706WKL.bigWig GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF385ZWT bigWig fold change over control ENCSR439OCL ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF407-human ENCAB019LBH DNA False 2018-01-26 ENCODE 1, 2 ENCFF227IZS, ENCFF410WYJ, ENCFF910IKB, ENCFF951IVR 1983246377 ENCODE Processing Pipeline 9f16ec3bc719d4ec45e89ae19c495487 https://www.encodeproject.org/files/ENCFF385ZWT/@@download/ENCFF385ZWT.bigWig GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF304VNY bed narrowPeak peaks ENCSR439OCL ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF407-human ENCAB019LBH DNA False 2018-01-26 ENCODE 1 ENCFF410WYJ, ENCFF910IKB 6436499 ENCODE Processing Pipeline 5aee68969db10b7a5888bd48c8349a5a https://www.encodeproject.org/files/ENCFF304VNY/@@download/ENCFF304VNY.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF256EXP bigBed narrowPeak peaks ENCSR439OCL ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF407-human ENCAB019LBH DNA False 2018-01-26 ENCODE 1 ENCFF304VNY 11087279 ENCODE Processing Pipeline 2c5045586884ebbf8a6ff516c36297fb https://www.encodeproject.org/files/ENCFF256EXP/@@download/ENCFF256EXP.bigBed GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF010MTV bigBed narrowPeak peaks ENCSR439OCL ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF407-human ENCAB019LBH DNA False 2018-01-26 ENCODE 1, 2 ENCFF566YGJ 13129475 ENCODE Processing Pipeline 7f2b172d98bd7529a56a4ebb34725671 https://www.encodeproject.org/files/ENCFF010MTV/@@download/ENCFF010MTV.bigBed GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF817IGZ bed narrowPeak peaks ENCSR439OCL ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF407-human ENCAB019LBH DNA False 2018-01-26 ENCODE 2 ENCFF227IZS, ENCFF951IVR 6423611 ENCODE Processing Pipeline b4ed51e566d80eea9d1007aff10a6898 https://www.encodeproject.org/files/ENCFF817IGZ/@@download/ENCFF817IGZ.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF776NRP bed narrowPeak conservative idr thresholded peaks ENCSR439OCL ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF407-human ENCAB019LBH DNA False 2018-01-26 ENCODE 1, 2 ENCFF304VNY, ENCFF419RSJ, ENCFF566YGJ, ENCFF817IGZ 55625 ENCODE Processing Pipeline 3fbc2d87d1069a805a6ea1c270db42c9 https://www.encodeproject.org/files/ENCFF776NRP/@@download/ENCFF776NRP.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF566YGJ bed narrowPeak peaks ENCSR439OCL ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF407-human ENCAB019LBH DNA False 2018-01-26 ENCODE 1, 2 ENCFF227IZS, ENCFF410WYJ, ENCFF910IKB, ENCFF951IVR 7131176 ENCODE Processing Pipeline 98360556d3aaca66f4956ebfbae4baf2 https://www.encodeproject.org/files/ENCFF566YGJ/@@download/ENCFF566YGJ.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF149SNH bigBed narrowPeak peaks ENCSR439OCL ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF407-human ENCAB019LBH DNA False 2018-01-26 ENCODE 2 ENCFF817IGZ 13280853 ENCODE Processing Pipeline a87c13b2539036b9e767c7a9a82b5f3d https://www.encodeproject.org/files/ENCFF149SNH/@@download/ENCFF149SNH.bigBed GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF269VCU bigBed narrowPeak conservative idr thresholded peaks ENCSR439OCL ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF407-human ENCAB019LBH DNA False 2018-01-26 ENCODE 1, 2 ENCFF776NRP 149820 ENCODE Processing Pipeline acf4e4d26cb9b59dbd8b59b0a92a2a1f https://www.encodeproject.org/files/ENCFF269VCU/@@download/ENCFF269VCU.bigBed GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF644XES bed narrowPeak optimal idr thresholded peaks ENCSR439OCL ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF407-human ENCAB019LBH DNA False 2018-01-26 ENCODE 1, 2 ENCFF304VNY, ENCFF419RSJ, ENCFF566YGJ, ENCFF817IGZ 68018 ENCODE Processing Pipeline 56994a1ff485a6855877f0d684aab018 https://www.encodeproject.org/files/ENCFF644XES/@@download/ENCFF644XES.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF100NWJ bigBed narrowPeak optimal idr thresholded peaks ENCSR439OCL ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF407-human ENCAB019LBH DNA False 2018-01-26 ENCODE 1, 2 ENCFF644XES 167243 ENCODE Processing Pipeline 670316ca3d622d449b9134245557cefa https://www.encodeproject.org/files/ENCFF100NWJ/@@download/ENCFF100NWJ.bigBed GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF605MPT fastq reads ENCSR948KMB ChIP-seq EFO:0002067 K562 cell line Homo sapiens PTBP1-human ENCAB553IRN DNA SDS formaldehyde False 2017-02-27 ENCODE 1 1 40 single-ended 448386592 Xiang-Dong Fu, UCSD 75777806cb5488eeaea5f96bcb2f39c4 SRA:SRR6214050 https://www.encodeproject.org/files/ENCFF605MPT/@@download/ENCFF605MPT.fastq.gz Illumina HiSeq 2500 /files/ENCFF510UAH/ released low read depth, low read length missing control alignments ENCFF233QNF fastq reads ENCSR948KMB ChIP-seq EFO:0002067 K562 cell line Homo sapiens PTBP1-human ENCAB553IRN DNA SDS formaldehyde False 2017-02-27 ENCODE 2 1 40 single-ended 446153500 Xiang-Dong Fu, UCSD 239f61dfe5835d168a11cf1d364a2cca SRA:SRR6214051 https://www.encodeproject.org/files/ENCFF233QNF/@@download/ENCFF233QNF.fastq.gz Illumina HiSeq 2500 /files/ENCFF092DDZ/ released low read depth, low read length missing control alignments ENCFF553UVH bam unfiltered alignments ENCSR948KMB ChIP-seq EFO:0002067 K562 cell line Homo sapiens PTBP1-human ENCAB553IRN DNA SDS formaldehyde False 2017-02-27 ENCODE 2 40 ENCFF233QNF, ENCFF807MUK 627140518 ENCODE Processing Pipeline 8031c67a8eca0d7ff431837ddc4e7c1e https://www.encodeproject.org/files/ENCFF553UVH/@@download/ENCFF553UVH.bam hg19 released low read depth, low read length missing control alignments ENCFF308JUD bam unfiltered alignments ENCSR948KMB ChIP-seq EFO:0002067 K562 cell line Homo sapiens PTBP1-human ENCAB553IRN DNA SDS formaldehyde False 2017-02-27 ENCODE 1 40 ENCFF605MPT, ENCFF643CGH 633295857 ENCODE Processing Pipeline 61e7a04d4f5f0be7aea815d7148e911b https://www.encodeproject.org/files/ENCFF308JUD/@@download/ENCFF308JUD.bam GRCh38 released low read depth, low read length missing control alignments ENCFF262KWU bam unfiltered alignments ENCSR948KMB ChIP-seq EFO:0002067 K562 cell line Homo sapiens PTBP1-human ENCAB553IRN DNA SDS formaldehyde False 2017-02-27 ENCODE 2 40 ENCFF233QNF, ENCFF643CGH 628469382 ENCODE Processing Pipeline b0ecf30b4202696e42192971548a20de https://www.encodeproject.org/files/ENCFF262KWU/@@download/ENCFF262KWU.bam GRCh38 released low read depth, low read length missing control alignments ENCFF174JQR bam alignments ENCSR948KMB ChIP-seq EFO:0002067 K562 cell line Homo sapiens PTBP1-human ENCAB553IRN DNA SDS formaldehyde False 2017-02-27 ENCODE 1 40 ENCFF605MPT, ENCFF807MUK 409127334 ENCODE Processing Pipeline ba896bbea206066fcc0a5ff9161aa631 https://www.encodeproject.org/files/ENCFF174JQR/@@download/ENCFF174JQR.bam hg19 released low read depth, low read length missing control alignments ENCFF679POE bam unfiltered alignments ENCSR948KMB ChIP-seq EFO:0002067 K562 cell line Homo sapiens PTBP1-human ENCAB553IRN DNA SDS formaldehyde False 2017-02-27 ENCODE 1 40 ENCFF605MPT, ENCFF807MUK 632053500 ENCODE Processing Pipeline 6afdcd3e62b1e89ca0fe55eca3b1ce7d https://www.encodeproject.org/files/ENCFF679POE/@@download/ENCFF679POE.bam hg19 released low read depth, low read length missing control alignments ENCFF455VOE bam alignments ENCSR948KMB ChIP-seq EFO:0002067 K562 cell line Homo sapiens PTBP1-human ENCAB553IRN DNA SDS formaldehyde False 2017-02-27 ENCODE 2 40 ENCFF233QNF, ENCFF807MUK 405743468 ENCODE Processing Pipeline 09379e98854321321805ac69b47f4734 https://www.encodeproject.org/files/ENCFF455VOE/@@download/ENCFF455VOE.bam hg19 released low read depth, low read length missing control alignments ENCFF525JGC bam alignments ENCSR948KMB ChIP-seq EFO:0002067 K562 cell line Homo sapiens PTBP1-human ENCAB553IRN DNA SDS formaldehyde False 2017-02-27 ENCODE 1 40 ENCFF605MPT, ENCFF643CGH 408496479 ENCODE Processing Pipeline 052d26541a14bd1be96d4e4148bcac5b https://www.encodeproject.org/files/ENCFF525JGC/@@download/ENCFF525JGC.bam GRCh38 released low read depth, low read length missing control alignments ENCFF031YZL bam alignments ENCSR948KMB ChIP-seq EFO:0002067 K562 cell line Homo sapiens PTBP1-human ENCAB553IRN DNA SDS formaldehyde False 2017-02-27 ENCODE 2 40 ENCFF233QNF, ENCFF643CGH 405162587 ENCODE Processing Pipeline 8260da507507ca968bb0718c457ddcc0 https://www.encodeproject.org/files/ENCFF031YZL/@@download/ENCFF031YZL.bam GRCh38 released low read depth, low read length missing control alignments ENCFF978MWQ bigWig signal p-value ENCSR948KMB ChIP-seq EFO:0002067 K562 cell line Homo sapiens PTBP1-human ENCAB553IRN DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF174JQR, ENCFF455VOE, ENCFF508DBG, ENCFF572OMD 833775991 ENCODE Processing Pipeline 2a1e31ef98dc5db21f0bbfb87f136c55 https://www.encodeproject.org/files/ENCFF978MWQ/@@download/ENCFF978MWQ.bigWig hg19 released low read depth, low read length missing control alignments ENCFF940BFH bigWig signal p-value ENCSR948KMB ChIP-seq EFO:0002067 K562 cell line Homo sapiens PTBP1-human ENCAB553IRN DNA SDS formaldehyde False 2017-02-27 ENCODE 1 ENCFF174JQR, ENCFF508DBG 448362427 ENCODE Processing Pipeline 2ca22dc60c9a1ac71bad62f4eaa0698f https://www.encodeproject.org/files/ENCFF940BFH/@@download/ENCFF940BFH.bigWig hg19 released low read depth, low read length missing control alignments ENCFF106XSS bigWig signal p-value ENCSR948KMB ChIP-seq EFO:0002067 K562 cell line Homo sapiens PTBP1-human ENCAB553IRN DNA SDS formaldehyde False 2017-02-27 ENCODE 2 ENCFF455VOE, ENCFF572OMD 420929908 ENCODE Processing Pipeline 0d215605e0315ee93e8453a7bf493a15 https://www.encodeproject.org/files/ENCFF106XSS/@@download/ENCFF106XSS.bigWig hg19 released low read depth, low read length missing control alignments ENCFF479MVC bed narrowPeak peaks ENCSR948KMB ChIP-seq EFO:0002067 K562 cell line Homo sapiens PTBP1-human ENCAB553IRN DNA SDS formaldehyde False 2017-02-27 ENCODE 2 ENCFF455VOE, ENCFF572OMD 5043027 ENCODE Processing Pipeline faae7e59d41b29ecf813dcbfe2b03a9a https://www.encodeproject.org/files/ENCFF479MVC/@@download/ENCFF479MVC.bed.gz hg19 released low read depth, low read length missing control alignments ENCFF547CND bigBed narrowPeak peaks ENCSR948KMB ChIP-seq EFO:0002067 K562 cell line Homo sapiens PTBP1-human ENCAB553IRN DNA SDS formaldehyde False 2017-02-27 ENCODE 2 ENCFF479MVC 12852203 ENCODE Processing Pipeline 6e73e71cfc05ce818ddf956460dfb459 https://www.encodeproject.org/files/ENCFF547CND/@@download/ENCFF547CND.bigBed hg19 released low read depth, low read length missing control alignments ENCFF647FZH bigBed narrowPeak peaks ENCSR948KMB ChIP-seq EFO:0002067 K562 cell line Homo sapiens PTBP1-human ENCAB553IRN DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF882YQN 13194256 ENCODE Processing Pipeline c5f300833500768a65151c0c3b76eafa https://www.encodeproject.org/files/ENCFF647FZH/@@download/ENCFF647FZH.bigBed hg19 released low read depth, low read length missing control alignments ENCFF094CAC bigWig fold change over control ENCSR948KMB ChIP-seq EFO:0002067 K562 cell line Homo sapiens PTBP1-human ENCAB553IRN DNA SDS formaldehyde False 2017-02-27 ENCODE 1 ENCFF174JQR, ENCFF508DBG 296878590 ENCODE Processing Pipeline b4fdba7a750ece40aa1c4a7e94cf93b6 https://www.encodeproject.org/files/ENCFF094CAC/@@download/ENCFF094CAC.bigWig hg19 released low read depth, low read length missing control alignments ENCFF856RHH bigWig fold change over control ENCSR948KMB ChIP-seq EFO:0002067 K562 cell line Homo sapiens PTBP1-human ENCAB553IRN DNA SDS formaldehyde False 2017-02-27 ENCODE 2 ENCFF455VOE, ENCFF572OMD 284736058 ENCODE Processing Pipeline 5f1d62c0830343d291e5dbdbb910864b https://www.encodeproject.org/files/ENCFF856RHH/@@download/ENCFF856RHH.bigWig hg19 released low read depth, low read length missing control alignments ENCFF882YQN bed narrowPeak peaks ENCSR948KMB ChIP-seq EFO:0002067 K562 cell line Homo sapiens PTBP1-human ENCAB553IRN DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF174JQR, ENCFF455VOE, ENCFF508DBG, ENCFF572OMD 6454217 ENCODE Processing Pipeline 62266859884ab87788c171984196e730 https://www.encodeproject.org/files/ENCFF882YQN/@@download/ENCFF882YQN.bed.gz hg19 released low read depth, low read length missing control alignments ENCFF913LYD bigWig fold change over control ENCSR948KMB ChIP-seq EFO:0002067 K562 cell line Homo sapiens PTBP1-human ENCAB553IRN DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF174JQR, ENCFF455VOE, ENCFF508DBG, ENCFF572OMD 680436676 ENCODE Processing Pipeline 0fbaced302283deea6a3428afc3080fe https://www.encodeproject.org/files/ENCFF913LYD/@@download/ENCFF913LYD.bigWig hg19 released low read depth, low read length missing control alignments ENCFF631MDU bigBed narrowPeak peaks ENCSR948KMB ChIP-seq EFO:0002067 K562 cell line Homo sapiens PTBP1-human ENCAB553IRN DNA SDS formaldehyde False 2017-02-27 ENCODE 1 ENCFF921LEX 12985765 ENCODE Processing Pipeline 376194d04559c04c46e30600d2feceb9 https://www.encodeproject.org/files/ENCFF631MDU/@@download/ENCFF631MDU.bigBed hg19 released low read depth, low read length missing control alignments ENCFF694BIA bed narrowPeak optimal idr thresholded peaks ENCSR948KMB ChIP-seq EFO:0002067 K562 cell line Homo sapiens PTBP1-human ENCAB553IRN DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF001TDO, ENCFF479MVC, ENCFF882YQN, ENCFF921LEX 86416 ENCODE Processing Pipeline 72a8e93e6ddf058b52d390f325564e50 https://www.encodeproject.org/files/ENCFF694BIA/@@download/ENCFF694BIA.bed.gz hg19 released low read depth, low read length missing control alignments ENCFF921LEX bed narrowPeak peaks ENCSR948KMB ChIP-seq EFO:0002067 K562 cell line Homo sapiens PTBP1-human ENCAB553IRN DNA SDS formaldehyde False 2017-02-27 ENCODE 1 ENCFF174JQR, ENCFF508DBG 5337244 ENCODE Processing Pipeline dda5c613676ab4d729d96d4c0e99c2a9 https://www.encodeproject.org/files/ENCFF921LEX/@@download/ENCFF921LEX.bed.gz hg19 released low read depth, low read length missing control alignments ENCFF588TAS bed narrowPeak conservative idr thresholded peaks ENCSR948KMB ChIP-seq EFO:0002067 K562 cell line Homo sapiens PTBP1-human ENCAB553IRN DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF001TDO, ENCFF479MVC, ENCFF882YQN, ENCFF921LEX 76985 ENCODE Processing Pipeline 2d471554dd48a7534b18fb02fe4e1b4d https://www.encodeproject.org/files/ENCFF588TAS/@@download/ENCFF588TAS.bed.gz hg19 released low read depth, low read length missing control alignments ENCFF830KVD bigBed narrowPeak optimal idr thresholded peaks ENCSR948KMB ChIP-seq EFO:0002067 K562 cell line Homo sapiens PTBP1-human ENCAB553IRN DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF694BIA 203973 ENCODE Processing Pipeline bac0bc2a65b03ec284d850838562e75b https://www.encodeproject.org/files/ENCFF830KVD/@@download/ENCFF830KVD.bigBed hg19 released low read depth, low read length missing control alignments ENCFF895WYA bigBed narrowPeak conservative idr thresholded peaks ENCSR948KMB ChIP-seq EFO:0002067 K562 cell line Homo sapiens PTBP1-human ENCAB553IRN DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF588TAS 189967 ENCODE Processing Pipeline f9e73cb98d33bc4c8822820e79daa8a3 https://www.encodeproject.org/files/ENCFF895WYA/@@download/ENCFF895WYA.bigBed hg19 released low read depth, low read length missing control alignments ENCFF388FQP bigWig signal p-value ENCSR948KMB ChIP-seq EFO:0002067 K562 cell line Homo sapiens PTBP1-human ENCAB553IRN DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF031YZL, ENCFF525JGC 929651274 ENCODE Processing Pipeline 28b598e95c05988c3e692c1ed362dadc https://www.encodeproject.org/files/ENCFF388FQP/@@download/ENCFF388FQP.bigWig GRCh38 released low read depth, low read length missing control alignments ENCFF193MWP bigWig signal p-value ENCSR948KMB ChIP-seq EFO:0002067 K562 cell line Homo sapiens PTBP1-human ENCAB553IRN DNA SDS formaldehyde False 2017-02-27 ENCODE 1 ENCFF525JGC 500913526 ENCODE Processing Pipeline d26062e6dd956f9c604e4acc93c34200 https://www.encodeproject.org/files/ENCFF193MWP/@@download/ENCFF193MWP.bigWig GRCh38 released low read depth, low read length missing control alignments ENCFF392GTZ bigWig signal p-value ENCSR948KMB ChIP-seq EFO:0002067 K562 cell line Homo sapiens PTBP1-human ENCAB553IRN DNA SDS formaldehyde False 2017-02-27 ENCODE 2 ENCFF031YZL 456542258 ENCODE Processing Pipeline f25756e02ce21305b18fa9a8d398e82f https://www.encodeproject.org/files/ENCFF392GTZ/@@download/ENCFF392GTZ.bigWig GRCh38 released low read depth, low read length missing control alignments ENCFF833XMU bigWig fold change over control ENCSR948KMB ChIP-seq EFO:0002067 K562 cell line Homo sapiens PTBP1-human ENCAB553IRN DNA SDS formaldehyde False 2017-02-27 ENCODE 2 ENCFF031YZL 281802091 ENCODE Processing Pipeline 94dacf5a2cca6f1d39c3cbc47b7f7594 https://www.encodeproject.org/files/ENCFF833XMU/@@download/ENCFF833XMU.bigWig GRCh38 released low read depth, low read length missing control alignments ENCFF127JTM bigWig fold change over control ENCSR948KMB ChIP-seq EFO:0002067 K562 cell line Homo sapiens PTBP1-human ENCAB553IRN DNA SDS formaldehyde False 2017-02-27 ENCODE 1 ENCFF525JGC 303673849 ENCODE Processing Pipeline 4ee06c0e8e9a915f47b3c5e4bbd3b454 https://www.encodeproject.org/files/ENCFF127JTM/@@download/ENCFF127JTM.bigWig GRCh38 released low read depth, low read length missing control alignments ENCFF109FPX bigWig fold change over control ENCSR948KMB ChIP-seq EFO:0002067 K562 cell line Homo sapiens PTBP1-human ENCAB553IRN DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF031YZL, ENCFF525JGC 672529823 ENCODE Processing Pipeline ddcdb7fdabfed4c0fa32ba34d9e2a0ac https://www.encodeproject.org/files/ENCFF109FPX/@@download/ENCFF109FPX.bigWig GRCh38 released low read depth, low read length missing control alignments ENCFF432KAK bed narrowPeak peaks ENCSR948KMB ChIP-seq EFO:0002067 K562 cell line Homo sapiens PTBP1-human ENCAB553IRN DNA SDS formaldehyde False 2017-02-27 ENCODE 1 ENCFF525JGC 5309261 ENCODE Processing Pipeline a214b85a5bcc4a89039c3dfd7f7b082d https://www.encodeproject.org/files/ENCFF432KAK/@@download/ENCFF432KAK.bed.gz GRCh38 released low read depth, low read length missing control alignments ENCFF814MDL bed narrowPeak peaks ENCSR948KMB ChIP-seq EFO:0002067 K562 cell line Homo sapiens PTBP1-human ENCAB553IRN DNA SDS formaldehyde False 2017-02-27 ENCODE 2 ENCFF031YZL 5034740 ENCODE Processing Pipeline 9b8285072e7507e8bd212609258df51d https://www.encodeproject.org/files/ENCFF814MDL/@@download/ENCFF814MDL.bed.gz GRCh38 released low read depth, low read length missing control alignments ENCFF167JUS bed narrowPeak peaks ENCSR948KMB ChIP-seq EFO:0002067 K562 cell line Homo sapiens PTBP1-human ENCAB553IRN DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF031YZL, ENCFF525JGC 6446888 ENCODE Processing Pipeline 5af07886449c98c598d090d9c72675c4 https://www.encodeproject.org/files/ENCFF167JUS/@@download/ENCFF167JUS.bed.gz GRCh38 released low read depth, low read length missing control alignments ENCFF888TCK bed narrowPeak conservative idr thresholded peaks ENCSR948KMB ChIP-seq EFO:0002067 K562 cell line Homo sapiens PTBP1-human ENCAB553IRN DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF167JUS, ENCFF419RSJ, ENCFF432KAK, ENCFF814MDL 77088 ENCODE Processing Pipeline 365d981882b9ddbc6b0325758b302dc7 https://www.encodeproject.org/files/ENCFF888TCK/@@download/ENCFF888TCK.bed.gz GRCh38 released low read depth, low read length missing control alignments ENCFF701HCA bigBed narrowPeak peaks ENCSR948KMB ChIP-seq EFO:0002067 K562 cell line Homo sapiens PTBP1-human ENCAB553IRN DNA SDS formaldehyde False 2017-02-27 ENCODE 1 ENCFF432KAK 12971900 ENCODE Processing Pipeline 2328b83a07f43b5d86a9a13fa5368567 https://www.encodeproject.org/files/ENCFF701HCA/@@download/ENCFF701HCA.bigBed GRCh38 released low read depth, low read length missing control alignments ENCFF249ABH bigBed narrowPeak peaks ENCSR948KMB ChIP-seq EFO:0002067 K562 cell line Homo sapiens PTBP1-human ENCAB553IRN DNA SDS formaldehyde False 2017-02-27 ENCODE 2 ENCFF814MDL 12867677 ENCODE Processing Pipeline f68b4d85ef5a64d8c2469c3e0bc362fc https://www.encodeproject.org/files/ENCFF249ABH/@@download/ENCFF249ABH.bigBed GRCh38 released low read depth, low read length missing control alignments ENCFF580MSM bigBed narrowPeak peaks ENCSR948KMB ChIP-seq EFO:0002067 K562 cell line Homo sapiens PTBP1-human ENCAB553IRN DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF167JUS 13212161 ENCODE Processing Pipeline 2ee19a50acada0121d002c02da4ac528 https://www.encodeproject.org/files/ENCFF580MSM/@@download/ENCFF580MSM.bigBed GRCh38 released low read depth, low read length missing control alignments ENCFF323HSJ bigBed narrowPeak conservative idr thresholded peaks ENCSR948KMB ChIP-seq EFO:0002067 K562 cell line Homo sapiens PTBP1-human ENCAB553IRN DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF888TCK 190941 ENCODE Processing Pipeline 735b5c7c3f6a696477dba7d099c95b26 https://www.encodeproject.org/files/ENCFF323HSJ/@@download/ENCFF323HSJ.bigBed GRCh38 released low read depth, low read length missing control alignments ENCFF773HPT bigBed narrowPeak optimal idr thresholded peaks ENCSR948KMB ChIP-seq EFO:0002067 K562 cell line Homo sapiens PTBP1-human ENCAB553IRN DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF917HXV 202281 ENCODE Processing Pipeline d14cabb42a523bdbfbd0563738e204d7 https://www.encodeproject.org/files/ENCFF773HPT/@@download/ENCFF773HPT.bigBed GRCh38 released low read depth, low read length missing control alignments ENCFF917HXV bed narrowPeak optimal idr thresholded peaks ENCSR948KMB ChIP-seq EFO:0002067 K562 cell line Homo sapiens PTBP1-human ENCAB553IRN DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF167JUS, ENCFF419RSJ, ENCFF432KAK, ENCFF814MDL 84401 ENCODE Processing Pipeline b7a99a8e16742bcfcb11974113622d69 https://www.encodeproject.org/files/ENCFF917HXV/@@download/ENCFF917HXV.bed.gz GRCh38 released low read depth, low read length missing control alignments ENCFF000PXS bam alignments ENCSR000BPJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2012-02-29 ENCODE 1 ENCFF000PYD 770601804 Richard Myers, HAIB 2a9f709c235dcc838c035503e2c742bd https://www.encodeproject.org/files/ENCFF000PXS/@@download/ENCFF000PXS.bam hg19 archived control low read depth, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF000PXT bam alignments ENCSR000BPJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2012-02-29 ENCODE 2 ENCFF000PYJ 1095263144 Richard Myers, HAIB 59fc32ff2c5988b29fec74a3b97b842f https://www.encodeproject.org/files/ENCFF000PXT/@@download/ENCFF000PXT.bam hg19 archived control low read depth, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF000PXV bigBed broadPeak peaks ENCSR000BPJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2012-02-29 ENCODE 1 1 ENCFF001UJL 1037259 Richard Myers, HAIB d085e3040772d85d0bda634d6ee0eb9c https://www.encodeproject.org/files/ENCFF000PXV/@@download/ENCFF000PXV.bigBed hg19 archived control low read depth, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF000PXX bigBed broadPeak peaks ENCSR000BPJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2012-02-29 ENCODE 2 1 ENCFF001UJM 990307 Richard Myers, HAIB 1e77d06eec04682789befa5612ef6ebb https://www.encodeproject.org/files/ENCFF000PXX/@@download/ENCFF000PXX.bigBed hg19 archived control low read depth, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF000PYA bigWig raw signal ENCSR000BPJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2012-02-29 ENCODE 1 1 93203185 Richard Myers, HAIB 64972e0aa9b844e1fe02ee6bf01e5841 https://www.encodeproject.org/files/ENCFF000PYA/@@download/ENCFF000PYA.bigWig hg19 archived control low read depth, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample, missing derived_from insufficient read depth ENCFF000PYB bigWig raw signal ENCSR000BPJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2012-02-29 ENCODE 2 1 37746731 Richard Myers, HAIB f37b17ce52368968d27284ae5b62a8fb https://www.encodeproject.org/files/ENCFF000PYB/@@download/ENCFF000PYB.bigWig hg19 archived control low read depth, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample, missing derived_from insufficient read depth ENCFF000PYD fastq reads ENCSR000BPJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2012-02-29 ENCODE 1 1 36 single-ended 691541138 Richard Myers, HAIB de9544df67ea4fb551faa82a4e0962f1 https://www.encodeproject.org/files/ENCFF000PYD/@@download/ENCFF000PYD.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000QEU/ released control low read depth, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF000PYJ fastq reads ENCSR000BPJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2012-02-29 ENCODE 2 1 36 single-ended 1126063251 Richard Myers, HAIB 8b2467cdbee1eddb94f48d537271dc5a https://www.encodeproject.org/files/ENCFF000PYJ/@@download/ENCFF000PYJ.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000QET/ released control low read depth, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF001UJL bed broadPeak peaks ENCSR000BPJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2012-02-29 ENCODE 1 1 712783 Richard Myers, HAIB d48bb62e6f61c79a64d8a4a277d0873a https://www.encodeproject.org/files/ENCFF001UJL/@@download/ENCFF001UJL.bed.gz hg19 archived control low read depth, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample, missing derived_from insufficient read depth ENCFF001UJM bed broadPeak peaks ENCSR000BPJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2012-02-29 ENCODE 2 1 ENCFF000PXT 618583 Richard Myers, HAIB 192c6cd042b8dc7ecafa5dcaca4aea57 https://www.encodeproject.org/files/ENCFF001UJM/@@download/ENCFF001UJM.bed.gz hg19 archived control low read depth, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF002CLS bed narrowPeak optimal idr thresholded peaks ENCSR000BPJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2012-02-29 ENCODE 892491 ENCODE Consortium Analysis Working Group 749db3fdd18af5e96e12683dc67852b6 https://www.encodeproject.org/files/ENCFF002CLS/@@download/ENCFF002CLS.bed.gz hg19 archived control low read depth, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample, missing derived_from insufficient read depth ENCFF914TDH bigBed narrowPeak optimal idr thresholded peaks ENCSR000BPJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2012-02-29 ENCODE ENCFF002CLS 1931026 ENCODE Consortium 9d9264405df2795cdc552890e53e4e1f https://www.encodeproject.org/files/ENCFF914TDH/@@download/ENCFF914TDH.bigBed hg19 archived control low read depth, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF691BQZ bam alignments ENCSR000BPJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000PYJ, ENCFF643CGH 630218936 ENCODE Processing Pipeline a533e02db31afe010b09e75237213d39 https://www.encodeproject.org/files/ENCFF691BQZ/@@download/ENCFF691BQZ.bam GRCh38 released control low read depth, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF552MDV bam unfiltered alignments ENCSR000BPJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2012-02-29 ENCODE 2 ENCFF000PYJ, ENCFF643CGH 1185097709 ENCODE Processing Pipeline 916ac66c2106e24f63fb992c970deed9 https://www.encodeproject.org/files/ENCFF552MDV/@@download/ENCFF552MDV.bam GRCh38 released control low read depth, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF108YVY bam unfiltered alignments ENCSR000BPJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2012-02-29 ENCODE 1 ENCFF000PYD, ENCFF643CGH 814025289 ENCODE Processing Pipeline cc08bb682c5869614975a0a294935c75 https://www.encodeproject.org/files/ENCFF108YVY/@@download/ENCFF108YVY.bam GRCh38 released control low read depth, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF391HFU bam alignments ENCSR000BPJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000PYD, ENCFF643CGH 305672367 ENCODE Processing Pipeline bf3c95bde51a6c7ed5e656da66a76b1c https://www.encodeproject.org/files/ENCFF391HFU/@@download/ENCFF391HFU.bam GRCh38 released control low read depth, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF938RUC bigWig signal p-value ENCSR000BPJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2012-02-29 ENCODE 2 ENCFF691BQZ, ENCFF913HVS 477896707 ENCODE Processing Pipeline f45dcce0b2b2432e25f96222186d5dd2 https://www.encodeproject.org/files/ENCFF938RUC/@@download/ENCFF938RUC.bigWig GRCh38 released control low read depth, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF636ARX bigWig signal p-value ENCSR000BPJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF234NVU, ENCFF391HFU, ENCFF691BQZ, ENCFF913HVS 633548092 ENCODE Processing Pipeline 65b925dc9fa7cc2e24bdc4a67670fdef https://www.encodeproject.org/files/ENCFF636ARX/@@download/ENCFF636ARX.bigWig GRCh38 released control low read depth, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF952VWD bigWig fold change over control ENCSR000BPJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2012-02-29 ENCODE 1 ENCFF234NVU, ENCFF391HFU 141975132 ENCODE Processing Pipeline 2bd75b70c9c56041292c75cff9a08290 https://www.encodeproject.org/files/ENCFF952VWD/@@download/ENCFF952VWD.bigWig GRCh38 released control low read depth, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF320OVF bigWig fold change over control ENCSR000BPJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2012-02-29 ENCODE 2 ENCFF691BQZ, ENCFF913HVS 308123571 ENCODE Processing Pipeline 43c4b51d4110b2d74cf838f77c9a016a https://www.encodeproject.org/files/ENCFF320OVF/@@download/ENCFF320OVF.bigWig GRCh38 released control low read depth, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF679MHC bigWig signal p-value ENCSR000BPJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2012-02-29 ENCODE 1 ENCFF234NVU, ENCFF391HFU 294709660 ENCODE Processing Pipeline d4d9fabc1e36606e8e08553c33b12779 https://www.encodeproject.org/files/ENCFF679MHC/@@download/ENCFF679MHC.bigWig GRCh38 released control low read depth, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF233ZLL bigWig fold change over control ENCSR000BPJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF234NVU, ENCFF391HFU, ENCFF691BQZ, ENCFF913HVS 512968255 ENCODE Processing Pipeline ca225ac6f4421ecf361e2c6df7ac5a75 https://www.encodeproject.org/files/ENCFF233ZLL/@@download/ENCFF233ZLL.bigWig GRCh38 released control low read depth, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF349NJE bed narrowPeak peaks ENCSR000BPJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF234NVU, ENCFF391HFU, ENCFF691BQZ, ENCFF913HVS 5145036 ENCODE Processing Pipeline 7ae05f4b87eb1b8b16ceaa490a09d31d https://www.encodeproject.org/files/ENCFF349NJE/@@download/ENCFF349NJE.bed.gz GRCh38 released control low read depth, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF667VJC bed narrowPeak peaks ENCSR000BPJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2012-02-29 ENCODE 2 ENCFF691BQZ, ENCFF913HVS 4336302 ENCODE Processing Pipeline dda20a17ec0748c3d2c9adee1841e951 https://www.encodeproject.org/files/ENCFF667VJC/@@download/ENCFF667VJC.bed.gz GRCh38 released control low read depth, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF226OEB bigBed narrowPeak peaks ENCSR000BPJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF349NJE 11524548 ENCODE Processing Pipeline 1dd576f82dbb6452b54c8a59229ed901 https://www.encodeproject.org/files/ENCFF226OEB/@@download/ENCFF226OEB.bigBed GRCh38 released control low read depth, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF400VVQ bigBed narrowPeak optimal idr thresholded peaks ENCSR000BPJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF119XFJ 1398588 ENCODE Processing Pipeline d7d30e2198d7fad8df29b681fd0dc05d https://www.encodeproject.org/files/ENCFF400VVQ/@@download/ENCFF400VVQ.bigBed GRCh38 released control low read depth, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF822CTO bed narrowPeak peaks ENCSR000BPJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2012-02-29 ENCODE 1 ENCFF234NVU, ENCFF391HFU 3326942 ENCODE Processing Pipeline df0bd3dad982550d48aed690ce4afe47 https://www.encodeproject.org/files/ENCFF822CTO/@@download/ENCFF822CTO.bed.gz GRCh38 released control low read depth, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF351LVG bigBed narrowPeak peaks ENCSR000BPJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2012-02-29 ENCODE 2 ENCFF667VJC 10630133 ENCODE Processing Pipeline 3bb16d97f8236aab89219b64bc497e65 https://www.encodeproject.org/files/ENCFF351LVG/@@download/ENCFF351LVG.bigBed GRCh38 released control low read depth, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF101MTI bed narrowPeak conservative idr thresholded peaks ENCSR000BPJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF349NJE, ENCFF419RSJ, ENCFF667VJC, ENCFF822CTO 695018 ENCODE Processing Pipeline 5f488b52e2d086ba8f2d1a0a064d3b02 https://www.encodeproject.org/files/ENCFF101MTI/@@download/ENCFF101MTI.bed.gz GRCh38 released control low read depth, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF119XFJ bed narrowPeak optimal idr thresholded peaks ENCSR000BPJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF349NJE, ENCFF419RSJ, ENCFF667VJC, ENCFF822CTO 801899 ENCODE Processing Pipeline d188231ecd51e08a69f22a2b2faf23f6 https://www.encodeproject.org/files/ENCFF119XFJ/@@download/ENCFF119XFJ.bed.gz GRCh38 released control low read depth, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF723ENR bigBed narrowPeak peaks ENCSR000BPJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2012-02-29 ENCODE 1 ENCFF822CTO 8031447 ENCODE Processing Pipeline e773346569a3af543b52531d88b93e50 https://www.encodeproject.org/files/ENCFF723ENR/@@download/ENCFF723ENR.bigBed GRCh38 released control low read depth, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF170OHJ bigBed narrowPeak conservative idr thresholded peaks ENCSR000BPJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF101MTI 1255023 ENCODE Processing Pipeline bf56b75d56cea68c9bd0a4c9375af79d https://www.encodeproject.org/files/ENCFF170OHJ/@@download/ENCFF170OHJ.bigBed GRCh38 released control low read depth, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF793JSR bam unfiltered alignments ENCSR000BPJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000PYD, ENCFF807MUK 812512283 ENCODE Processing Pipeline fd004a11fc40ae718e01e83fef215866 https://www.encodeproject.org/files/ENCFF793JSR/@@download/ENCFF793JSR.bam hg19 released control low read depth, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF146HTM bam alignments ENCSR000BPJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000PYD, ENCFF807MUK 306007950 ENCODE Processing Pipeline eda5b6d156cf262e706afa72a476bac1 https://www.encodeproject.org/files/ENCFF146HTM/@@download/ENCFF146HTM.bam hg19 released control low read depth, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF866NKL bam alignments ENCSR000BPJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000PYJ, ENCFF807MUK 630671315 ENCODE Processing Pipeline 90c3098dbefe8da0745bb40bae6c4999 https://www.encodeproject.org/files/ENCFF866NKL/@@download/ENCFF866NKL.bam hg19 released control low read depth, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF823ECV bam unfiltered alignments ENCSR000BPJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000PYJ, ENCFF807MUK 1180524569 ENCODE Processing Pipeline f2c9fd9f507dbbbd8efb5704a85c0e67 https://www.encodeproject.org/files/ENCFF823ECV/@@download/ENCFF823ECV.bam hg19 released control low read depth, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF699AUL bigBed narrowPeak peaks ENCSR000BPJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2012-02-29 ENCODE 2 ENCFF443OXB 10584572 ENCODE Processing Pipeline 2e730d01cd15dc612ddf3779beb613a6 https://www.encodeproject.org/files/ENCFF699AUL/@@download/ENCFF699AUL.bigBed hg19 released control low read depth, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF681OMH bed narrowPeak conservative idr thresholded peaks ENCSR000BPJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF001TDO, ENCFF235AXH, ENCFF443OXB, ENCFF815GMT 694376 ENCODE Processing Pipeline fa6e913bb60c8122dd1cb50b0bf1042c https://www.encodeproject.org/files/ENCFF681OMH/@@download/ENCFF681OMH.bed.gz hg19 released control low read depth, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF965ZKU bigWig fold change over control ENCSR000BPJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2012-02-29 ENCODE 2 ENCFF701KUD, ENCFF866NKL 309775991 ENCODE Processing Pipeline 891020fcc5d27900947a71d6200144b1 https://www.encodeproject.org/files/ENCFF965ZKU/@@download/ENCFF965ZKU.bigWig hg19 released control low read depth, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF224HUY bigBed narrowPeak peaks ENCSR000BPJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2012-02-29 ENCODE 1 ENCFF235AXH 8043659 ENCODE Processing Pipeline f1a8d6284393728e3b6004866d537a22 https://www.encodeproject.org/files/ENCFF224HUY/@@download/ENCFF224HUY.bigBed hg19 released control low read depth, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF085HTY bed narrowPeak optimal idr thresholded peaks ENCSR000BPJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF001TDO, ENCFF235AXH, ENCFF443OXB, ENCFF815GMT 795526 ENCODE Processing Pipeline ef53728caa8d0b461eed1f1fd335edf4 https://www.encodeproject.org/files/ENCFF085HTY/@@download/ENCFF085HTY.bed.gz hg19 released control low read depth, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF609SWF bigBed narrowPeak optimal idr thresholded peaks ENCSR000BPJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF085HTY 1385237 ENCODE Processing Pipeline f1aa40fb1a80d5b8d906861aaf58e89f https://www.encodeproject.org/files/ENCFF609SWF/@@download/ENCFF609SWF.bigBed hg19 released control low read depth, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF197NRP bigWig signal p-value ENCSR000BPJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2012-02-29 ENCODE 1 ENCFF146HTM, ENCFF585PFH 282193509 ENCODE Processing Pipeline 70f2be375d5ae7b42601a668d5dd6d1c https://www.encodeproject.org/files/ENCFF197NRP/@@download/ENCFF197NRP.bigWig hg19 released control low read depth, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF235AXH bed narrowPeak peaks ENCSR000BPJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2012-02-29 ENCODE 1 ENCFF146HTM, ENCFF585PFH 3326792 ENCODE Processing Pipeline 1607a273700f6eefef836f47e175b8d9 https://www.encodeproject.org/files/ENCFF235AXH/@@download/ENCFF235AXH.bed.gz hg19 released control low read depth, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF319SOQ bigBed narrowPeak peaks ENCSR000BPJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF815GMT 11519647 ENCODE Processing Pipeline 555d0989179a56da40046e5b3117baf2 https://www.encodeproject.org/files/ENCFF319SOQ/@@download/ENCFF319SOQ.bigBed hg19 released control low read depth, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF800LND bigWig fold change over control ENCSR000BPJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2012-02-29 ENCODE 1 ENCFF146HTM, ENCFF585PFH 142260004 ENCODE Processing Pipeline 53ac0ab2da61caa1736992c7b22eb8b1 https://www.encodeproject.org/files/ENCFF800LND/@@download/ENCFF800LND.bigWig hg19 released control low read depth, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF910QVN bigWig signal p-value ENCSR000BPJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF146HTM, ENCFF585PFH, ENCFF701KUD, ENCFF866NKL 608662342 ENCODE Processing Pipeline bdbc86d21c79520a7c439ba64c386edb https://www.encodeproject.org/files/ENCFF910QVN/@@download/ENCFF910QVN.bigWig hg19 released control low read depth, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF647TFD bigWig signal p-value ENCSR000BPJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2012-02-29 ENCODE 2 ENCFF701KUD, ENCFF866NKL 386916424 ENCODE Processing Pipeline ea56022ff5022cd81ba65511b953b9a8 https://www.encodeproject.org/files/ENCFF647TFD/@@download/ENCFF647TFD.bigWig hg19 released control low read depth, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF014YLT bigWig fold change over control ENCSR000BPJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF146HTM, ENCFF585PFH, ENCFF701KUD, ENCFF866NKL 519344103 ENCODE Processing Pipeline 2fcde3af1d9e9f5cba762c9a77b787d4 https://www.encodeproject.org/files/ENCFF014YLT/@@download/ENCFF014YLT.bigWig hg19 released control low read depth, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF443OXB bed narrowPeak peaks ENCSR000BPJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2012-02-29 ENCODE 2 ENCFF701KUD, ENCFF866NKL 4310832 ENCODE Processing Pipeline a765467f07d8ac9c4e8183b883573cd7 https://www.encodeproject.org/files/ENCFF443OXB/@@download/ENCFF443OXB.bed.gz hg19 released control low read depth, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF815GMT bed narrowPeak peaks ENCSR000BPJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF146HTM, ENCFF585PFH, ENCFF701KUD, ENCFF866NKL 5176464 ENCODE Processing Pipeline ce6a3b47124cbd6d40e1150798e5b492 https://www.encodeproject.org/files/ENCFF815GMT/@@download/ENCFF815GMT.bed.gz hg19 released control low read depth, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF189UCA bigBed narrowPeak conservative idr thresholded peaks ENCSR000BPJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCF-human ENCAB000AFR DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF681OMH 1249417 ENCODE Processing Pipeline 64ddc36f222bec6ed15948051ff8c19c https://www.encodeproject.org/files/ENCFF189UCA/@@download/ENCFF189UCA.bigBed hg19 released control low read depth, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF626IDD bam unfiltered alignments ENCSR729HVR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF644-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 50 ENCFF576YQE, ENCFF807MUK, ENCFF863YQQ 1505570495 ENCODE Processing Pipeline 15a6e7699755d7fdd333de2c3aec004d https://www.encodeproject.org/files/ENCFF626IDD/@@download/ENCFF626IDD.bam hg19 released missing genetic modification characterization, low read depth ENCFF145SMA bam unfiltered alignments ENCSR729HVR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF644-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 50 ENCFF458SBM, ENCFF807MUK, ENCFF922XIL 2183066928 ENCODE Processing Pipeline 008c1c10f365232044c7ee97fa533ae3 https://www.encodeproject.org/files/ENCFF145SMA/@@download/ENCFF145SMA.bam hg19 released missing genetic modification characterization, low read depth ENCFF576YQE fastq reads ENCSR729HVR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF644-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 1 50 single-ended 675771947 Kevin White, UChicago 6d8873cd85158cc5e8ba7c38851d6bf4 SRA:SRR6214093 https://www.encodeproject.org/files/ENCFF576YQE/@@download/ENCFF576YQE.fastq.gz Illumina HiSeq 2500 /files/ENCFF656LJN/ released missing genetic modification characterization, low read depth ENCFF458SBM fastq reads ENCSR729HVR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF644-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 1 50 single-ended 818178121 Kevin White, UChicago 040184a246085218fed907d0348c154a SRA:SRR6214095 https://www.encodeproject.org/files/ENCFF458SBM/@@download/ENCFF458SBM.fastq.gz Illumina HiSeq 2500 /files/ENCFF656LJN/ released missing genetic modification characterization, low read depth ENCFF922XIL fastq reads ENCSR729HVR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF644-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 1 50 single-ended 1210520770 Kevin White, UChicago b72d9fd28f15c85cc4ea295ec981ecf6 SRA:SRR6214096 https://www.encodeproject.org/files/ENCFF922XIL/@@download/ENCFF922XIL.fastq.gz Illumina HiSeq 2500 /files/ENCFF656LJN/ released missing genetic modification characterization, low read depth ENCFF863YQQ fastq reads ENCSR729HVR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF644-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 1 50 single-ended 826660513 Kevin White, UChicago 58284919776b4fce38c9e74b21f9a67c SRA:SRR6214094 https://www.encodeproject.org/files/ENCFF863YQQ/@@download/ENCFF863YQQ.fastq.gz Illumina HiSeq 2500 /files/ENCFF656LJN/ released missing genetic modification characterization, low read depth ENCFF729SVH bam alignments ENCSR729HVR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF644-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 50 ENCFF576YQE, ENCFF807MUK, ENCFF863YQQ 860310018 ENCODE Processing Pipeline ddcc463a24771860d8a493a68ff4350c https://www.encodeproject.org/files/ENCFF729SVH/@@download/ENCFF729SVH.bam hg19 released missing genetic modification characterization, low read depth ENCFF968XOX bam alignments ENCSR729HVR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF644-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 50 ENCFF458SBM, ENCFF807MUK, ENCFF922XIL 1639888456 ENCODE Processing Pipeline d7485c91458acf6e9b2fa55205ab1626 https://www.encodeproject.org/files/ENCFF968XOX/@@download/ENCFF968XOX.bam hg19 released missing genetic modification characterization, low read depth ENCFF914DDL bigWig signal p-value ENCSR729HVR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF644-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF479IHH, ENCFF968XOX 671949860 ENCODE Processing Pipeline 14c4a7f7fad91ab3361297acc934b7f4 https://www.encodeproject.org/files/ENCFF914DDL/@@download/ENCFF914DDL.bigWig hg19 released missing genetic modification characterization, low read depth ENCFF740FKH bigWig signal p-value ENCSR729HVR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF644-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF479IHH, ENCFF729SVH, ENCFF968XOX 950554284 ENCODE Processing Pipeline de875a7514a660288b05fc2f502978c9 https://www.encodeproject.org/files/ENCFF740FKH/@@download/ENCFF740FKH.bigWig hg19 released missing genetic modification characterization, low read depth ENCFF414KMD bigWig signal p-value ENCSR729HVR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF644-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF479IHH, ENCFF729SVH 688944900 ENCODE Processing Pipeline fbdca1b07080894324f22185f6364b41 https://www.encodeproject.org/files/ENCFF414KMD/@@download/ENCFF414KMD.bigWig hg19 released missing genetic modification characterization, low read depth ENCFF709AGW bigWig fold change over control ENCSR729HVR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF644-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF479IHH, ENCFF729SVH 541459495 ENCODE Processing Pipeline 053ac481a653a5de7925f714bb080a05 https://www.encodeproject.org/files/ENCFF709AGW/@@download/ENCFF709AGW.bigWig hg19 released missing genetic modification characterization, low read depth ENCFF704VBL bigWig fold change over control ENCSR729HVR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF644-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF479IHH, ENCFF968XOX 817092094 ENCODE Processing Pipeline 984614b3724b229d2d19e7b7642c3d4a https://www.encodeproject.org/files/ENCFF704VBL/@@download/ENCFF704VBL.bigWig hg19 released missing genetic modification characterization, low read depth ENCFF768USG bed narrowPeak peaks ENCSR729HVR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF644-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF479IHH, ENCFF968XOX 6946843 ENCODE Processing Pipeline 745f5ce37edc7b4e7134cbfed6a06e23 https://www.encodeproject.org/files/ENCFF768USG/@@download/ENCFF768USG.bed.gz hg19 released missing genetic modification characterization, low read depth ENCFF908OPJ bigWig fold change over control ENCSR729HVR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF644-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF479IHH, ENCFF729SVH, ENCFF968XOX 1062782670 ENCODE Processing Pipeline 50547ebcf33f1afabb981c6ab6bbf963 https://www.encodeproject.org/files/ENCFF908OPJ/@@download/ENCFF908OPJ.bigWig hg19 released missing genetic modification characterization, low read depth ENCFF587MUY bed narrowPeak peaks ENCSR729HVR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF644-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF479IHH, ENCFF729SVH 6674009 ENCODE Processing Pipeline 3478ef7e080c45e4d353062fb4157e75 https://www.encodeproject.org/files/ENCFF587MUY/@@download/ENCFF587MUY.bed.gz hg19 released missing genetic modification characterization, low read depth ENCFF887PEG bed narrowPeak peaks ENCSR729HVR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF644-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF479IHH, ENCFF729SVH, ENCFF968XOX 7208367 ENCODE Processing Pipeline 468c5f095b3bfa17490c180ac3fb2ec4 https://www.encodeproject.org/files/ENCFF887PEG/@@download/ENCFF887PEG.bed.gz hg19 released missing genetic modification characterization, low read depth ENCFF907NRC bigBed narrowPeak peaks ENCSR729HVR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF644-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF587MUY 12897313 ENCODE Processing Pipeline fbfdf73e35d29faafd20524d8e54cabf https://www.encodeproject.org/files/ENCFF907NRC/@@download/ENCFF907NRC.bigBed hg19 released missing genetic modification characterization, low read depth ENCFF625UAI bigBed narrowPeak peaks ENCSR729HVR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF644-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF768USG 13057071 ENCODE Processing Pipeline 92ab26af6d87c9382748ba4e4898104b https://www.encodeproject.org/files/ENCFF625UAI/@@download/ENCFF625UAI.bigBed hg19 released missing genetic modification characterization, low read depth ENCFF373ESZ bigBed narrowPeak peaks ENCSR729HVR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF644-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF887PEG 12945359 ENCODE Processing Pipeline 763b29b2b69a01adfd98babf855ba1b9 https://www.encodeproject.org/files/ENCFF373ESZ/@@download/ENCFF373ESZ.bigBed hg19 released missing genetic modification characterization, low read depth ENCFF871UOO bam unfiltered alignments ENCSR729HVR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF644-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 50 ENCFF576YQE, ENCFF643CGH, ENCFF863YQQ 1509835271 ENCODE Processing Pipeline 9dcf409ccbb3934a384a2f89caf3f3f8 https://www.encodeproject.org/files/ENCFF871UOO/@@download/ENCFF871UOO.bam GRCh38 released missing genetic modification characterization, low read depth ENCFF095OEN bam alignments ENCSR729HVR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF644-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 50 ENCFF576YQE, ENCFF643CGH, ENCFF863YQQ 859802968 ENCODE Processing Pipeline ad7a4ed5d0a40c67bdf084940c641ca0 https://www.encodeproject.org/files/ENCFF095OEN/@@download/ENCFF095OEN.bam GRCh38 released missing genetic modification characterization, low read depth ENCFF883WDV bam unfiltered alignments ENCSR729HVR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF644-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 50 ENCFF458SBM, ENCFF643CGH, ENCFF922XIL 2192124258 ENCODE Processing Pipeline 1cab118ef1f5121188229cedfb0de87c https://www.encodeproject.org/files/ENCFF883WDV/@@download/ENCFF883WDV.bam GRCh38 released missing genetic modification characterization, low read depth ENCFF334BPF bam alignments ENCSR729HVR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF644-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 50 ENCFF458SBM, ENCFF643CGH, ENCFF922XIL 1639215325 ENCODE Processing Pipeline b89d5b07915b7a88a4bbc2f78f30925a https://www.encodeproject.org/files/ENCFF334BPF/@@download/ENCFF334BPF.bam GRCh38 released missing genetic modification characterization, low read depth ENCFF593OQW bigWig signal p-value ENCSR729HVR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF644-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF095OEN, ENCFF334BPF, ENCFF493VPN 956355872 ENCODE Processing Pipeline cfebc30494406be6af3e1325fdbf6c85 https://www.encodeproject.org/files/ENCFF593OQW/@@download/ENCFF593OQW.bigWig GRCh38 released missing genetic modification characterization, low read depth ENCFF630JZM bigWig signal p-value ENCSR729HVR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF644-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF095OEN, ENCFF493VPN 566288494 ENCODE Processing Pipeline 5b71abba196d09f5f91beb6fee0c6a11 https://www.encodeproject.org/files/ENCFF630JZM/@@download/ENCFF630JZM.bigWig GRCh38 released missing genetic modification characterization, low read depth ENCFF381POK bigWig signal p-value ENCSR729HVR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF644-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF334BPF, ENCFF493VPN 783605527 ENCODE Processing Pipeline 5977a8f44952996333f1bcddd9bcda81 https://www.encodeproject.org/files/ENCFF381POK/@@download/ENCFF381POK.bigWig GRCh38 released missing genetic modification characterization, low read depth ENCFF123TST bigWig fold change over control ENCSR729HVR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF644-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF095OEN, ENCFF493VPN 544526555 ENCODE Processing Pipeline 9e8f37a988624a8a0a67d9d9431ed4c1 https://www.encodeproject.org/files/ENCFF123TST/@@download/ENCFF123TST.bigWig GRCh38 released missing genetic modification characterization, low read depth ENCFF371WIN bigWig fold change over control ENCSR729HVR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF644-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF334BPF, ENCFF493VPN 805809493 ENCODE Processing Pipeline a01fccb0ebe8cbded89b903b4acba683 https://www.encodeproject.org/files/ENCFF371WIN/@@download/ENCFF371WIN.bigWig GRCh38 released missing genetic modification characterization, low read depth ENCFF837LRU bigWig fold change over control ENCSR729HVR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF644-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF095OEN, ENCFF334BPF, ENCFF493VPN 1070457336 ENCODE Processing Pipeline e7a190e40c80734dc8e1a8d1d5f0f42b https://www.encodeproject.org/files/ENCFF837LRU/@@download/ENCFF837LRU.bigWig GRCh38 released missing genetic modification characterization, low read depth ENCFF407ACB bed narrowPeak peaks ENCSR729HVR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF644-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF095OEN, ENCFF493VPN 6443870 ENCODE Processing Pipeline cffab73e1a6d1edb009062a0a1eb3aec https://www.encodeproject.org/files/ENCFF407ACB/@@download/ENCFF407ACB.bed.gz GRCh38 released missing genetic modification characterization, low read depth ENCFF843NMG bigBed narrowPeak peaks ENCSR729HVR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF644-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF407ACB 12919038 ENCODE Processing Pipeline 6acbc7d1b246da2824a731ab7d0c4eb1 https://www.encodeproject.org/files/ENCFF843NMG/@@download/ENCFF843NMG.bigBed GRCh38 released missing genetic modification characterization, low read depth ENCFF532YUW bed narrowPeak peaks ENCSR729HVR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF644-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF334BPF, ENCFF493VPN 6821457 ENCODE Processing Pipeline 90ee3c724f2f52ebb0e20150e7ab2636 https://www.encodeproject.org/files/ENCFF532YUW/@@download/ENCFF532YUW.bed.gz GRCh38 released missing genetic modification characterization, low read depth ENCFF591NGE bed narrowPeak peaks ENCSR729HVR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF644-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF095OEN, ENCFF334BPF, ENCFF493VPN 7128913 ENCODE Processing Pipeline 35d373d6c1212b46b6bad82eb9b94b9c https://www.encodeproject.org/files/ENCFF591NGE/@@download/ENCFF591NGE.bed.gz GRCh38 released missing genetic modification characterization, low read depth ENCFF716JRY bigBed narrowPeak peaks ENCSR729HVR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF644-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF532YUW 13060211 ENCODE Processing Pipeline 2226eb9070e81f0af43045d6c987b8a4 https://www.encodeproject.org/files/ENCFF716JRY/@@download/ENCFF716JRY.bigBed GRCh38 released missing genetic modification characterization, low read depth ENCFF499LJX bed narrowPeak conservative idr thresholded peaks ENCSR729HVR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF644-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF407ACB, ENCFF419RSJ, ENCFF532YUW, ENCFF591NGE 237843 ENCODE Processing Pipeline 22ae967510f40d8631aab8ab35b873e9 https://www.encodeproject.org/files/ENCFF499LJX/@@download/ENCFF499LJX.bed.gz GRCh38 released missing genetic modification characterization, low read depth ENCFF309VCI bigBed narrowPeak peaks ENCSR729HVR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF644-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF591NGE 12951811 ENCODE Processing Pipeline 953a072409723a3a3128f6ccd7f2e824 https://www.encodeproject.org/files/ENCFF309VCI/@@download/ENCFF309VCI.bigBed GRCh38 released missing genetic modification characterization, low read depth ENCFF038XLK bigBed narrowPeak conservative idr thresholded peaks ENCSR729HVR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF644-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF499LJX 585768 ENCODE Processing Pipeline 8913a459c847b8aecd2897d592398f57 https://www.encodeproject.org/files/ENCFF038XLK/@@download/ENCFF038XLK.bigBed GRCh38 released missing genetic modification characterization, low read depth ENCFF977ZNJ bed narrowPeak optimal idr thresholded peaks ENCSR729HVR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF644-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF407ACB, ENCFF419RSJ, ENCFF532YUW, ENCFF591NGE 237807 ENCODE Processing Pipeline ba773340d82d813138597b5654be9d93 https://www.encodeproject.org/files/ENCFF977ZNJ/@@download/ENCFF977ZNJ.bed.gz GRCh38 released missing genetic modification characterization, low read depth ENCFF551EXL bigBed narrowPeak optimal idr thresholded peaks ENCSR729HVR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF644-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF977ZNJ 587477 ENCODE Processing Pipeline 1fd96ef7be301be023251f9767319f47 https://www.encodeproject.org/files/ENCFF551EXL/@@download/ENCFF551EXL.bigBed GRCh38 released missing genetic modification characterization, low read depth ENCFF377ZLR bed narrowPeak conservative idr thresholded peaks ENCSR729HVR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF644-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF001TDO, ENCFF587MUY, ENCFF768USG, ENCFF887PEG 192374 ENCODE Processing Pipeline 30ce346d0419f40d40f18293b8a6c329 https://www.encodeproject.org/files/ENCFF377ZLR/@@download/ENCFF377ZLR.bed.gz hg19 released missing genetic modification characterization, low read depth ENCFF007UDB bigBed narrowPeak conservative idr thresholded peaks ENCSR729HVR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF644-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF377ZLR 432132 ENCODE Processing Pipeline b48fe66066935f6a32540c04040e9dbb https://www.encodeproject.org/files/ENCFF007UDB/@@download/ENCFF007UDB.bigBed hg19 released missing genetic modification characterization, low read depth ENCFF173NRW bed narrowPeak optimal idr thresholded peaks ENCSR729HVR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF644-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF001TDO, ENCFF587MUY, ENCFF768USG, ENCFF887PEG 196576 ENCODE Processing Pipeline 88b2198aa6b7cfb45030cc7203fa53c3 https://www.encodeproject.org/files/ENCFF173NRW/@@download/ENCFF173NRW.bed.gz hg19 released missing genetic modification characterization, low read depth ENCFF160DOO bigBed narrowPeak optimal idr thresholded peaks ENCSR729HVR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF644-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF173NRW 439630 ENCODE Processing Pipeline ed1241980833456e55ad8aac41bbde99 https://www.encodeproject.org/files/ENCFF160DOO/@@download/ENCFF160DOO.bigBed hg19 released missing genetic modification characterization, low read depth ENCFF386GSM bam unfiltered alignments ENCSR395HWC ChIP-seq EFO:0002067 K562 cell line Homo sapiens IKZF1-human ENCAB144WPX DNA False 2016-04-22 ENCODE 1 100 ENCFF222FXU, ENCFF687HHR, ENCFF807MUK 3763127698 ENCODE Processing Pipeline 89a30316fcdb877f952345c1b321de86 https://www.encodeproject.org/files/ENCFF386GSM/@@download/ENCFF386GSM.bam hg19 released low read depth, mild to moderate bottlenecking ENCFF210FPV bam unfiltered alignments ENCSR395HWC ChIP-seq EFO:0002067 K562 cell line Homo sapiens IKZF1-human ENCAB144WPX DNA False 2016-04-22 ENCODE 2 100 ENCFF015LUT, ENCFF424OOE, ENCFF807MUK 5238881297 ENCODE Processing Pipeline 1034b9525b814eaa3c795370cb735712 https://www.encodeproject.org/files/ENCFF210FPV/@@download/ENCFF210FPV.bam hg19 released low read depth, mild to moderate bottlenecking ENCFF222FXU fastq reads ENCSR395HWC ChIP-seq EFO:0002067 K562 cell line Homo sapiens IKZF1-human ENCAB144WPX DNA False 2016-04-22 ENCODE 1 1 100 paired-ended 2 ENCFF687HHR 1780276130 Michael Snyder, Stanford 982b019adbb53bafd92b3906d3ab03a9 SRA:SRR5111570 https://www.encodeproject.org/files/ENCFF222FXU/@@download/ENCFF222FXU.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFH/ released low read depth, mild to moderate bottlenecking ENCFF424OOE fastq reads ENCSR395HWC ChIP-seq EFO:0002067 K562 cell line Homo sapiens IKZF1-human ENCAB144WPX DNA False 2016-04-22 ENCODE 2 1 100 paired-ended 2 ENCFF015LUT 2556853990 Michael Snyder, Stanford 3e7e1f474ff6bf9259239685d11358bc SRA:SRR5111569 https://www.encodeproject.org/files/ENCFF424OOE/@@download/ENCFF424OOE.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFA/ released low read depth, mild to moderate bottlenecking ENCFF015LUT fastq reads ENCSR395HWC ChIP-seq EFO:0002067 K562 cell line Homo sapiens IKZF1-human ENCAB144WPX DNA False 2016-04-22 ENCODE 2 1 100 paired-ended 1 ENCFF424OOE 2471598416 Michael Snyder, Stanford 7c5da32a69637ae0633eeef40a8560b4 SRA:SRR5111569 https://www.encodeproject.org/files/ENCFF015LUT/@@download/ENCFF015LUT.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFD/ released low read depth, mild to moderate bottlenecking ENCFF687HHR fastq reads ENCSR395HWC ChIP-seq EFO:0002067 K562 cell line Homo sapiens IKZF1-human ENCAB144WPX DNA False 2016-04-22 ENCODE 1 1 100 paired-ended 1 ENCFF222FXU 1741762463 Michael Snyder, Stanford 40573ab65c2852027440745d2eb03b24 SRA:SRR5111570 https://www.encodeproject.org/files/ENCFF687HHR/@@download/ENCFF687HHR.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFF/ released low read depth, mild to moderate bottlenecking ENCFF475POO bam alignments ENCSR395HWC ChIP-seq EFO:0002067 K562 cell line Homo sapiens IKZF1-human ENCAB144WPX DNA False 2016-04-22 ENCODE 1 100 ENCFF222FXU, ENCFF687HHR, ENCFF807MUK 2985622814 ENCODE Processing Pipeline 4b0204c763f02d336cf636618046ef54 https://www.encodeproject.org/files/ENCFF475POO/@@download/ENCFF475POO.bam hg19 released low read depth, mild to moderate bottlenecking ENCFF572MZM bam alignments ENCSR395HWC ChIP-seq EFO:0002067 K562 cell line Homo sapiens IKZF1-human ENCAB144WPX DNA False 2016-04-22 ENCODE 2 100 ENCFF015LUT, ENCFF424OOE, ENCFF807MUK 3770325300 ENCODE Processing Pipeline af01170edff6dc5163e2d69bae7573e3 https://www.encodeproject.org/files/ENCFF572MZM/@@download/ENCFF572MZM.bam hg19 released low read depth, mild to moderate bottlenecking ENCFF624CHS bigWig signal p-value ENCSR395HWC ChIP-seq EFO:0002067 K562 cell line Homo sapiens IKZF1-human ENCAB144WPX DNA False 2016-04-22 ENCODE 1 ENCFF475POO, ENCFF581ZJL 1019498824 ENCODE Processing Pipeline 14b7f8727520de8e7cffb680780d1ffd https://www.encodeproject.org/files/ENCFF624CHS/@@download/ENCFF624CHS.bigWig hg19 released low read depth, mild to moderate bottlenecking ENCFF817GCQ bigWig signal p-value ENCSR395HWC ChIP-seq EFO:0002067 K562 cell line Homo sapiens IKZF1-human ENCAB144WPX DNA False 2016-04-22 ENCODE 2 ENCFF051LWI, ENCFF572MZM 919118993 ENCODE Processing Pipeline 148d7d21bf99f79f5532c95ec6332412 https://www.encodeproject.org/files/ENCFF817GCQ/@@download/ENCFF817GCQ.bigWig hg19 released low read depth, mild to moderate bottlenecking ENCFF401SIW bigWig signal p-value ENCSR395HWC ChIP-seq EFO:0002067 K562 cell line Homo sapiens IKZF1-human ENCAB144WPX DNA False 2016-04-22 ENCODE 1, 2 ENCFF051LWI, ENCFF475POO, ENCFF572MZM, ENCFF581ZJL 1684055467 ENCODE Processing Pipeline 0c13449cedfea17159a44e43d77cd168 https://www.encodeproject.org/files/ENCFF401SIW/@@download/ENCFF401SIW.bigWig hg19 released low read depth, mild to moderate bottlenecking ENCFF604HBX bigWig fold change over control ENCSR395HWC ChIP-seq EFO:0002067 K562 cell line Homo sapiens IKZF1-human ENCAB144WPX DNA False 2016-04-22 ENCODE 1 ENCFF475POO, ENCFF581ZJL 950239428 ENCODE Processing Pipeline b8287e8e6b8f4eb0e8e731ae46a70e6e https://www.encodeproject.org/files/ENCFF604HBX/@@download/ENCFF604HBX.bigWig hg19 released low read depth, mild to moderate bottlenecking ENCFF146LSA bigWig fold change over control ENCSR395HWC ChIP-seq EFO:0002067 K562 cell line Homo sapiens IKZF1-human ENCAB144WPX DNA False 2016-04-22 ENCODE 2 ENCFF051LWI, ENCFF572MZM 981372742 ENCODE Processing Pipeline fdf5677c8c5fc64add55f7fde78bf53f https://www.encodeproject.org/files/ENCFF146LSA/@@download/ENCFF146LSA.bigWig hg19 released low read depth, mild to moderate bottlenecking ENCFF012KOC bigWig fold change over control ENCSR395HWC ChIP-seq EFO:0002067 K562 cell line Homo sapiens IKZF1-human ENCAB144WPX DNA False 2016-04-22 ENCODE 1, 2 ENCFF051LWI, ENCFF475POO, ENCFF572MZM, ENCFF581ZJL 1873265379 ENCODE Processing Pipeline bc5fb728bca7b8014a3fc847f2776314 https://www.encodeproject.org/files/ENCFF012KOC/@@download/ENCFF012KOC.bigWig hg19 released low read depth, mild to moderate bottlenecking ENCFF303CAQ bigBed narrowPeak peaks ENCSR395HWC ChIP-seq EFO:0002067 K562 cell line Homo sapiens IKZF1-human ENCAB144WPX DNA False 2016-04-22 ENCODE 1, 2 ENCFF038VEX 12969411 ENCODE Processing Pipeline 00018335d1c44196519e5173ca528708 https://www.encodeproject.org/files/ENCFF303CAQ/@@download/ENCFF303CAQ.bigBed hg19 released low read depth, mild to moderate bottlenecking ENCFF723ESB bed narrowPeak peaks ENCSR395HWC ChIP-seq EFO:0002067 K562 cell line Homo sapiens IKZF1-human ENCAB144WPX DNA False 2016-04-22 ENCODE 1 ENCFF475POO, ENCFF581ZJL 6989631 ENCODE Processing Pipeline c5a9c9206e878fe8941bc3ea139ce753 https://www.encodeproject.org/files/ENCFF723ESB/@@download/ENCFF723ESB.bed.gz hg19 released low read depth, mild to moderate bottlenecking ENCFF669ACI bed narrowPeak peaks ENCSR395HWC ChIP-seq EFO:0002067 K562 cell line Homo sapiens IKZF1-human ENCAB144WPX DNA False 2016-04-22 ENCODE 2 ENCFF051LWI, ENCFF572MZM 7096163 ENCODE Processing Pipeline b03385abd664a172cb86eefdadf9db0a https://www.encodeproject.org/files/ENCFF669ACI/@@download/ENCFF669ACI.bed.gz hg19 released low read depth, mild to moderate bottlenecking ENCFF927LKL bigBed narrowPeak peaks ENCSR395HWC ChIP-seq EFO:0002067 K562 cell line Homo sapiens IKZF1-human ENCAB144WPX DNA False 2016-04-22 ENCODE 1 ENCFF723ESB 13063264 ENCODE Processing Pipeline 4ad1b018bde468067d7941dda975b2ac https://www.encodeproject.org/files/ENCFF927LKL/@@download/ENCFF927LKL.bigBed hg19 released low read depth, mild to moderate bottlenecking ENCFF118BTU bigBed narrowPeak peaks ENCSR395HWC ChIP-seq EFO:0002067 K562 cell line Homo sapiens IKZF1-human ENCAB144WPX DNA False 2016-04-22 ENCODE 2 ENCFF669ACI 13012535 ENCODE Processing Pipeline b4c1c68498ccb430e420150ab48444cf https://www.encodeproject.org/files/ENCFF118BTU/@@download/ENCFF118BTU.bigBed hg19 released low read depth, mild to moderate bottlenecking ENCFF038VEX bed narrowPeak peaks ENCSR395HWC ChIP-seq EFO:0002067 K562 cell line Homo sapiens IKZF1-human ENCAB144WPX DNA False 2016-04-22 ENCODE 1, 2 ENCFF051LWI, ENCFF475POO, ENCFF572MZM, ENCFF581ZJL 7196410 ENCODE Processing Pipeline 5c35cc55400ee755f9c829f3ec65fbd0 https://www.encodeproject.org/files/ENCFF038VEX/@@download/ENCFF038VEX.bed.gz hg19 released low read depth, mild to moderate bottlenecking ENCFF781YKJ bam unfiltered alignments ENCSR395HWC ChIP-seq EFO:0002067 K562 cell line Homo sapiens IKZF1-human ENCAB144WPX DNA False 2016-04-22 ENCODE 1 100 ENCFF222FXU, ENCFF643CGH, ENCFF687HHR 3764916371 ENCODE Processing Pipeline bc50bb62f53a735d88dd5b7c05e9e150 https://www.encodeproject.org/files/ENCFF781YKJ/@@download/ENCFF781YKJ.bam GRCh38 released low read depth, mild to moderate bottlenecking ENCFF160IPT bam unfiltered alignments ENCSR395HWC ChIP-seq EFO:0002067 K562 cell line Homo sapiens IKZF1-human ENCAB144WPX DNA False 2016-04-22 ENCODE 2 100 ENCFF015LUT, ENCFF424OOE, ENCFF643CGH 5241783123 ENCODE Processing Pipeline 05f5a229ddee895fc2c314eec6f9ef27 https://www.encodeproject.org/files/ENCFF160IPT/@@download/ENCFF160IPT.bam GRCh38 released low read depth, mild to moderate bottlenecking ENCFF013MXK bam alignments ENCSR395HWC ChIP-seq EFO:0002067 K562 cell line Homo sapiens IKZF1-human ENCAB144WPX DNA False 2016-04-22 ENCODE 1 100 ENCFF222FXU, ENCFF643CGH, ENCFF687HHR 2987344134 ENCODE Processing Pipeline 43c907f47ea5ad1ba6f8d22ef238320c https://www.encodeproject.org/files/ENCFF013MXK/@@download/ENCFF013MXK.bam GRCh38 released low read depth, mild to moderate bottlenecking ENCFF752FIR bam alignments ENCSR395HWC ChIP-seq EFO:0002067 K562 cell line Homo sapiens IKZF1-human ENCAB144WPX DNA False 2016-04-22 ENCODE 2 100 ENCFF015LUT, ENCFF424OOE, ENCFF643CGH 3772020005 ENCODE Processing Pipeline a6c5a1344915b1e6119c0cca0f6a8f5d https://www.encodeproject.org/files/ENCFF752FIR/@@download/ENCFF752FIR.bam GRCh38 released low read depth, mild to moderate bottlenecking ENCFF133WOT bigWig signal p-value ENCSR395HWC ChIP-seq EFO:0002067 K562 cell line Homo sapiens IKZF1-human ENCAB144WPX DNA False 2016-04-22 ENCODE 1 ENCFF013MXK, ENCFF910IKB 997364788 ENCODE Processing Pipeline 4d1fa5c21b98e19ab0c44b336ae3de00 https://www.encodeproject.org/files/ENCFF133WOT/@@download/ENCFF133WOT.bigWig GRCh38 released low read depth, mild to moderate bottlenecking ENCFF191ZBQ bigWig signal p-value ENCSR395HWC ChIP-seq EFO:0002067 K562 cell line Homo sapiens IKZF1-human ENCAB144WPX DNA False 2016-04-22 ENCODE 2 ENCFF227IZS, ENCFF752FIR 974897681 ENCODE Processing Pipeline 613bac975408b49e48e7d3c4c66a81df https://www.encodeproject.org/files/ENCFF191ZBQ/@@download/ENCFF191ZBQ.bigWig GRCh38 released low read depth, mild to moderate bottlenecking ENCFF457EGB bigWig signal p-value ENCSR395HWC ChIP-seq EFO:0002067 K562 cell line Homo sapiens IKZF1-human ENCAB144WPX DNA False 2016-04-22 ENCODE 1, 2 ENCFF013MXK, ENCFF227IZS, ENCFF752FIR, ENCFF910IKB 1863353015 ENCODE Processing Pipeline a3a63f1f3669fcc6bf709c35340a28cf https://www.encodeproject.org/files/ENCFF457EGB/@@download/ENCFF457EGB.bigWig GRCh38 released low read depth, mild to moderate bottlenecking ENCFF590UTP bigWig fold change over control ENCSR395HWC ChIP-seq EFO:0002067 K562 cell line Homo sapiens IKZF1-human ENCAB144WPX DNA False 2016-04-22 ENCODE 1 ENCFF013MXK, ENCFF910IKB 949490462 ENCODE Processing Pipeline e843fd46a9e9af29319ddd3b7f172523 https://www.encodeproject.org/files/ENCFF590UTP/@@download/ENCFF590UTP.bigWig GRCh38 released low read depth, mild to moderate bottlenecking ENCFF166RSX bigWig fold change over control ENCSR395HWC ChIP-seq EFO:0002067 K562 cell line Homo sapiens IKZF1-human ENCAB144WPX DNA False 2016-04-22 ENCODE 2 ENCFF227IZS, ENCFF752FIR 981978933 ENCODE Processing Pipeline e112c046f8e5552c354f55df92eeaa8d https://www.encodeproject.org/files/ENCFF166RSX/@@download/ENCFF166RSX.bigWig GRCh38 released low read depth, mild to moderate bottlenecking ENCFF517NJW bigWig fold change over control ENCSR395HWC ChIP-seq EFO:0002067 K562 cell line Homo sapiens IKZF1-human ENCAB144WPX DNA False 2016-04-22 ENCODE 1, 2 ENCFF013MXK, ENCFF227IZS, ENCFF752FIR, ENCFF910IKB 1869957524 ENCODE Processing Pipeline c745d80903621361bef7a9b013c3bb10 https://www.encodeproject.org/files/ENCFF517NJW/@@download/ENCFF517NJW.bigWig GRCh38 released low read depth, mild to moderate bottlenecking ENCFF306ZCS bed narrowPeak peaks ENCSR395HWC ChIP-seq EFO:0002067 K562 cell line Homo sapiens IKZF1-human ENCAB144WPX DNA False 2016-04-22 ENCODE 2 ENCFF227IZS, ENCFF752FIR 6904325 ENCODE Processing Pipeline 6ff0167ab161220441f612e445384f5c https://www.encodeproject.org/files/ENCFF306ZCS/@@download/ENCFF306ZCS.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking ENCFF794ZCA bed narrowPeak peaks ENCSR395HWC ChIP-seq EFO:0002067 K562 cell line Homo sapiens IKZF1-human ENCAB144WPX DNA False 2016-04-22 ENCODE 1 ENCFF013MXK, ENCFF910IKB 6884550 ENCODE Processing Pipeline e8a0848a77d27b6f4b0d2db77210cb99 https://www.encodeproject.org/files/ENCFF794ZCA/@@download/ENCFF794ZCA.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking ENCFF698BNB bigBed narrowPeak peaks ENCSR395HWC ChIP-seq EFO:0002067 K562 cell line Homo sapiens IKZF1-human ENCAB144WPX DNA False 2016-04-22 ENCODE 2 ENCFF306ZCS 12831372 ENCODE Processing Pipeline 87e4240381b4fbc0c52f260a35b2a32f https://www.encodeproject.org/files/ENCFF698BNB/@@download/ENCFF698BNB.bigBed GRCh38 released low read depth, mild to moderate bottlenecking ENCFF957QFG bed narrowPeak peaks ENCSR395HWC ChIP-seq EFO:0002067 K562 cell line Homo sapiens IKZF1-human ENCAB144WPX DNA False 2016-04-22 ENCODE 1, 2 ENCFF013MXK, ENCFF227IZS, ENCFF752FIR, ENCFF910IKB 7097074 ENCODE Processing Pipeline 542ae9664bb7ff56bbe3b4b0763a9189 https://www.encodeproject.org/files/ENCFF957QFG/@@download/ENCFF957QFG.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking ENCFF242WGY bigBed narrowPeak peaks ENCSR395HWC ChIP-seq EFO:0002067 K562 cell line Homo sapiens IKZF1-human ENCAB144WPX DNA False 2016-04-22 ENCODE 1 ENCFF794ZCA 13015302 ENCODE Processing Pipeline 6a5807ec5ee3a4c697f69411c221f90d https://www.encodeproject.org/files/ENCFF242WGY/@@download/ENCFF242WGY.bigBed GRCh38 released low read depth, mild to moderate bottlenecking ENCFF337FYR bigBed narrowPeak conservative idr thresholded peaks ENCSR395HWC ChIP-seq EFO:0002067 K562 cell line Homo sapiens IKZF1-human ENCAB144WPX DNA False 2016-04-22 ENCODE 1, 2 ENCFF214VWR 1525823 ENCODE Processing Pipeline abcefe0f5c7f75dd40773888923fd23c https://www.encodeproject.org/files/ENCFF337FYR/@@download/ENCFF337FYR.bigBed GRCh38 released low read depth, mild to moderate bottlenecking ENCFF427GIQ bigBed narrowPeak peaks ENCSR395HWC ChIP-seq EFO:0002067 K562 cell line Homo sapiens IKZF1-human ENCAB144WPX DNA False 2016-04-22 ENCODE 1, 2 ENCFF957QFG 12856273 ENCODE Processing Pipeline 4756c4835fb9065bbbd89d94a4f95955 https://www.encodeproject.org/files/ENCFF427GIQ/@@download/ENCFF427GIQ.bigBed GRCh38 released low read depth, mild to moderate bottlenecking ENCFF994OQH bed narrowPeak optimal idr thresholded peaks ENCSR395HWC ChIP-seq EFO:0002067 K562 cell line Homo sapiens IKZF1-human ENCAB144WPX DNA False 2016-04-22 ENCODE 1, 2 ENCFF306ZCS, ENCFF419RSJ, ENCFF794ZCA, ENCFF957QFG 959869 ENCODE Processing Pipeline c34f95ee3df4e2e3e5092c6da750dd67 https://www.encodeproject.org/files/ENCFF994OQH/@@download/ENCFF994OQH.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking ENCFF214VWR bed narrowPeak conservative idr thresholded peaks ENCSR395HWC ChIP-seq EFO:0002067 K562 cell line Homo sapiens IKZF1-human ENCAB144WPX DNA False 2016-04-22 ENCODE 1, 2 ENCFF306ZCS, ENCFF419RSJ, ENCFF794ZCA, ENCFF957QFG 860812 ENCODE Processing Pipeline 2f15c06fecd9a0b8c63cdecd7e14a905 https://www.encodeproject.org/files/ENCFF214VWR/@@download/ENCFF214VWR.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking ENCFF330ZPJ bigBed narrowPeak optimal idr thresholded peaks ENCSR395HWC ChIP-seq EFO:0002067 K562 cell line Homo sapiens IKZF1-human ENCAB144WPX DNA False 2016-04-22 ENCODE 1, 2 ENCFF994OQH 1668214 ENCODE Processing Pipeline 724da0ed673036cc7726d1bc76afdc14 https://www.encodeproject.org/files/ENCFF330ZPJ/@@download/ENCFF330ZPJ.bigBed GRCh38 released low read depth, mild to moderate bottlenecking ENCFF058ETY bigBed narrowPeak optimal idr thresholded peaks ENCSR395HWC ChIP-seq EFO:0002067 K562 cell line Homo sapiens IKZF1-human ENCAB144WPX DNA False 2016-04-22 ENCODE 1, 2 ENCFF968JVX 1524530 ENCODE Processing Pipeline 346bf45f7d8be94be90f8e57a68e0433 https://www.encodeproject.org/files/ENCFF058ETY/@@download/ENCFF058ETY.bigBed hg19 released low read depth, mild to moderate bottlenecking ENCFF429YHE bigBed narrowPeak conservative idr thresholded peaks ENCSR395HWC ChIP-seq EFO:0002067 K562 cell line Homo sapiens IKZF1-human ENCAB144WPX DNA False 2016-04-22 ENCODE 1, 2 ENCFF570TDY 1396184 ENCODE Processing Pipeline 0cc4ce0ea9e62c76312a60d8d4b3795c https://www.encodeproject.org/files/ENCFF429YHE/@@download/ENCFF429YHE.bigBed hg19 released low read depth, mild to moderate bottlenecking ENCFF570TDY bed narrowPeak conservative idr thresholded peaks ENCSR395HWC ChIP-seq EFO:0002067 K562 cell line Homo sapiens IKZF1-human ENCAB144WPX DNA False 2016-04-22 ENCODE 1, 2 ENCFF001TDO, ENCFF038VEX, ENCFF669ACI, ENCFF723ESB 759062 ENCODE Processing Pipeline b4cd03af3d9947e55e0ac2f0e7a7278e https://www.encodeproject.org/files/ENCFF570TDY/@@download/ENCFF570TDY.bed.gz hg19 released low read depth, mild to moderate bottlenecking ENCFF968JVX bed narrowPeak optimal idr thresholded peaks ENCSR395HWC ChIP-seq EFO:0002067 K562 cell line Homo sapiens IKZF1-human ENCAB144WPX DNA False 2016-04-22 ENCODE 1, 2 ENCFF001TDO, ENCFF038VEX, ENCFF669ACI, ENCFF723ESB 853540 ENCODE Processing Pipeline 684bdc0057a6241a64f889a8afb4cd56 https://www.encodeproject.org/files/ENCFF968JVX/@@download/ENCFF968JVX.bed.gz hg19 released low read depth, mild to moderate bottlenecking ENCFF733ZTJ bam unfiltered alignments ENCSR557RVF ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZHX1-human ENCAB361RPF DNA False 2014-07-07 ENCODE 3 36 ENCFF002EET, ENCFF807MUK 1337647996 ENCODE Processing Pipeline b982dad9f77271dec78da06b47c2112b https://www.encodeproject.org/files/ENCFF733ZTJ/@@download/ENCFF733ZTJ.bam hg19 released low read depth, low read length missing control alignments ENCFF656RPU bam unfiltered alignments ENCSR557RVF ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZHX1-human ENCAB361RPF DNA False 2014-07-07 ENCODE 1 36 ENCFF002EES, ENCFF807MUK 1187958227 ENCODE Processing Pipeline c5d685b4963a890c0dc95d33123c0e10 https://www.encodeproject.org/files/ENCFF656RPU/@@download/ENCFF656RPU.bam hg19 released low read depth, low read length missing control alignments ENCFF594TUS bigWig signal p-value ENCSR557RVF ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZHX1-human ENCAB361RPF DNA False 2014-07-07 ENCODE 3 ENCFF845YHI, ENCFF879OQC 584646400 ENCODE Processing Pipeline 4822aeea7ca85771ae659b2a4b08e0b5 https://www.encodeproject.org/files/ENCFF594TUS/@@download/ENCFF594TUS.bigWig hg19 released low read depth, low read length missing control alignments ENCFF794ZAP bigWig fold change over control ENCSR557RVF ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZHX1-human ENCAB361RPF DNA False 2014-07-07 ENCODE 3 ENCFF845YHI, ENCFF879OQC 505731668 ENCODE Processing Pipeline 18a0575520d9402380a142f242d06b5b https://www.encodeproject.org/files/ENCFF794ZAP/@@download/ENCFF794ZAP.bigWig hg19 released low read depth, low read length missing control alignments ENCFF608GUA bed narrowPeak peaks ENCSR557RVF ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZHX1-human ENCAB361RPF DNA False 2014-07-07 ENCODE 1, 3 ENCFF335IPE, ENCFF845YHI, ENCFF879OQC, ENCFF899GZH 6485442 ENCODE Processing Pipeline 3c6a1d69c22cc2308208f4b1923c105b https://www.encodeproject.org/files/ENCFF608GUA/@@download/ENCFF608GUA.bed.gz hg19 released low read depth, low read length missing control alignments ENCFF924ENQ bed narrowPeak peaks ENCSR557RVF ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZHX1-human ENCAB361RPF DNA False 2014-07-07 ENCODE 1 ENCFF335IPE, ENCFF899GZH 4790813 ENCODE Processing Pipeline 1796f8c5ec325de31bd279836a44dc3e https://www.encodeproject.org/files/ENCFF924ENQ/@@download/ENCFF924ENQ.bed.gz hg19 released low read depth, low read length missing control alignments ENCFF194DPB bed narrowPeak peaks ENCSR557RVF ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZHX1-human ENCAB361RPF DNA False 2014-07-07 ENCODE 3 ENCFF845YHI, ENCFF879OQC 5260968 ENCODE Processing Pipeline 77912b8e64ebf6573a59dd80c16e9e84 https://www.encodeproject.org/files/ENCFF194DPB/@@download/ENCFF194DPB.bed.gz hg19 released low read depth, low read length missing control alignments ENCFF156HEN bigBed narrowPeak peaks ENCSR557RVF ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZHX1-human ENCAB361RPF DNA False 2014-07-07 ENCODE 3 ENCFF194DPB 11112291 ENCODE Processing Pipeline e1146778fd6cb9d5dcee65d6e4e13f49 https://www.encodeproject.org/files/ENCFF156HEN/@@download/ENCFF156HEN.bigBed hg19 released low read depth, low read length missing control alignments ENCFF892PXY bigBed narrowPeak peaks ENCSR557RVF ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZHX1-human ENCAB361RPF DNA False 2014-07-07 ENCODE 1 ENCFF924ENQ 10886735 ENCODE Processing Pipeline 8c10d9e5c073eaf2cdb82c86e07cfc5b https://www.encodeproject.org/files/ENCFF892PXY/@@download/ENCFF892PXY.bigBed hg19 released low read depth, low read length missing control alignments ENCFF195ODE bed narrowPeak optimal idr thresholded peaks ENCSR557RVF ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZHX1-human ENCAB361RPF DNA False 2014-07-07 ENCODE 1, 3 ENCFF001TDO, ENCFF194DPB, ENCFF608GUA, ENCFF924ENQ 66009 ENCODE Processing Pipeline a1e2f7cfe616efa0fd80d7f1210ba11f https://www.encodeproject.org/files/ENCFF195ODE/@@download/ENCFF195ODE.bed.gz hg19 released low read depth, low read length missing control alignments ENCFF908BDF bed narrowPeak conservative idr thresholded peaks ENCSR557RVF ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZHX1-human ENCAB361RPF DNA False 2014-07-07 ENCODE 1, 3 ENCFF001TDO, ENCFF194DPB, ENCFF608GUA, ENCFF924ENQ 53092 ENCODE Processing Pipeline 27709e05eca3ad07f1b446528ac5ec8d https://www.encodeproject.org/files/ENCFF908BDF/@@download/ENCFF908BDF.bed.gz hg19 released low read depth, low read length missing control alignments ENCFF158KDT bigBed narrowPeak peaks ENCSR557RVF ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZHX1-human ENCAB361RPF DNA False 2014-07-07 ENCODE 1, 3 ENCFF608GUA 13440173 ENCODE Processing Pipeline 4a5227e418ac8c0860dcc0c6f0fea2e9 https://www.encodeproject.org/files/ENCFF158KDT/@@download/ENCFF158KDT.bigBed hg19 released low read depth, low read length missing control alignments ENCFF546ACT bigBed narrowPeak conservative idr thresholded peaks ENCSR557RVF ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZHX1-human ENCAB361RPF DNA False 2014-07-07 ENCODE 1, 3 ENCFF908BDF 161981 ENCODE Processing Pipeline 6cf920b9a005d8befd5b4d31b098565a https://www.encodeproject.org/files/ENCFF546ACT/@@download/ENCFF546ACT.bigBed hg19 released low read depth, low read length missing control alignments ENCFF627BRM bigBed narrowPeak optimal idr thresholded peaks ENCSR557RVF ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZHX1-human ENCAB361RPF DNA False 2014-07-07 ENCODE 1, 3 ENCFF195ODE 183026 ENCODE Processing Pipeline d0c13d347a85a6375a3958696a6893fd https://www.encodeproject.org/files/ENCFF627BRM/@@download/ENCFF627BRM.bigBed hg19 released low read depth, low read length missing control alignments ENCFF002EES fastq reads ENCSR557RVF ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZHX1-human ENCAB361RPF DNA False 2014-07-07 ENCODE 1 1 36 single-ended 985508743 Michael Snyder, Stanford 6f8a7dcbc9fd7cdd1f516209b71ed0af SRA:SRR5111768 https://www.encodeproject.org/files/ENCFF002EES/@@download/ENCFF002EES.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF002ECW/ released low read depth, low read length missing control alignments ENCFF002EET fastq reads ENCSR557RVF ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZHX1-human ENCAB361RPF DNA False 2014-07-07 ENCODE 3 1 36 single-ended 1085897224 Michael Snyder, Stanford 47eecdc52750bafc88707dad4f3652f8 SRA:SRR5111769 https://www.encodeproject.org/files/ENCFF002EET/@@download/ENCFF002EET.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF002ECS/ released low read depth, low read length missing control alignments ENCFF845YHI bam alignments ENCSR557RVF ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZHX1-human ENCAB361RPF DNA False 2014-07-07 ENCODE 3 36 ENCFF002EET, ENCFF807MUK 950173273 ENCODE Processing Pipeline e3275b8eb5a30f4bdeb1e56d60815834 https://www.encodeproject.org/files/ENCFF845YHI/@@download/ENCFF845YHI.bam hg19 released low read depth, low read length missing control alignments ENCFF899GZH bam alignments ENCSR557RVF ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZHX1-human ENCAB361RPF DNA False 2014-07-07 ENCODE 1 36 ENCFF002EES, ENCFF807MUK 780721574 ENCODE Processing Pipeline 4be78d74dc41328f0db8180d9d159b9f https://www.encodeproject.org/files/ENCFF899GZH/@@download/ENCFF899GZH.bam hg19 released low read depth, low read length missing control alignments ENCFF638VAM bigWig signal p-value ENCSR557RVF ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZHX1-human ENCAB361RPF DNA False 2014-07-07 ENCODE 3 ENCFF845YHI, ENCFF879OQC 531444839 ENCODE Processing Pipeline 48c41b35b0d1c77132c71546f8514e5a https://www.encodeproject.org/files/ENCFF638VAM/@@download/ENCFF638VAM.bigWig hg19 archived low read depth, low read length missing control alignments ENCFF098RXY bigWig signal p-value ENCSR557RVF ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZHX1-human ENCAB361RPF DNA False 2014-07-07 ENCODE 1 ENCFF335IPE, ENCFF899GZH 572163482 ENCODE Processing Pipeline eba3eeb91ce50876a337c74b6b34b767 https://www.encodeproject.org/files/ENCFF098RXY/@@download/ENCFF098RXY.bigWig hg19 released low read depth, low read length missing control alignments ENCFF719AJG bigWig signal p-value ENCSR557RVF ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZHX1-human ENCAB361RPF DNA False 2014-07-07 ENCODE 1, 3 ENCFF335IPE, ENCFF845YHI, ENCFF879OQC, ENCFF899GZH 1042564575 ENCODE Processing Pipeline e99ef8be8e13ef2cc43cb018c47aa31a https://www.encodeproject.org/files/ENCFF719AJG/@@download/ENCFF719AJG.bigWig hg19 released low read depth, low read length missing control alignments ENCFF629UEA bigWig fold change over control ENCSR557RVF ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZHX1-human ENCAB361RPF DNA False 2014-07-07 ENCODE 1 ENCFF335IPE, ENCFF899GZH 433668177 ENCODE Processing Pipeline f0c41d8eacfb86590bc631a5288599cd https://www.encodeproject.org/files/ENCFF629UEA/@@download/ENCFF629UEA.bigWig hg19 released low read depth, low read length missing control alignments ENCFF812BKX bigWig fold change over control ENCSR557RVF ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZHX1-human ENCAB361RPF DNA False 2014-07-07 ENCODE 3 ENCFF845YHI, ENCFF879OQC 487279608 ENCODE Processing Pipeline 9fd679aa468ba482350676af7fb2a078 https://www.encodeproject.org/files/ENCFF812BKX/@@download/ENCFF812BKX.bigWig hg19 archived low read depth, low read length missing control alignments ENCFF963SBX bigWig fold change over control ENCSR557RVF ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZHX1-human ENCAB361RPF DNA False 2014-07-07 ENCODE 1, 3 ENCFF335IPE, ENCFF845YHI, ENCFF879OQC, ENCFF899GZH 1040302117 ENCODE Processing Pipeline 43254460826ced6742826b4af4aecf18 https://www.encodeproject.org/files/ENCFF963SBX/@@download/ENCFF963SBX.bigWig hg19 released low read depth, low read length missing control alignments ENCFF349DOV bed narrowPeak peaks ENCSR557RVF ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZHX1-human ENCAB361RPF DNA False 2014-07-07 ENCODE 1 ENCFF335IPE, ENCFF899GZH 4973568 ENCODE Processing Pipeline 5207521ced5ffdc41c59ac3c68d6ba0a https://www.encodeproject.org/files/ENCFF349DOV/@@download/ENCFF349DOV.bed.gz hg19 archived low read depth, low read length missing control alignments ENCFF076QRM bed narrowPeak peaks ENCSR557RVF ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZHX1-human ENCAB361RPF DNA False 2014-07-07 ENCODE 3 ENCFF845YHI, ENCFF879OQC 5395752 ENCODE Processing Pipeline 1ccda4371d5402a9011ac952a3684b18 https://www.encodeproject.org/files/ENCFF076QRM/@@download/ENCFF076QRM.bed.gz hg19 archived low read depth, low read length missing control alignments ENCFF207BTX bed narrowPeak peaks ENCSR557RVF ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZHX1-human ENCAB361RPF DNA False 2014-07-07 ENCODE 1, 3 ENCFF335IPE, ENCFF845YHI, ENCFF879OQC, ENCFF899GZH 6661666 ENCODE Processing Pipeline 154f6e3919a5d7f5e10f183b10139295 https://www.encodeproject.org/files/ENCFF207BTX/@@download/ENCFF207BTX.bed.gz hg19 archived low read depth, low read length missing control alignments ENCFF542SNG bigBed narrowPeak peaks ENCSR557RVF ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZHX1-human ENCAB361RPF DNA False 2014-07-07 ENCODE 3 ENCFF076QRM 11160196 ENCODE Processing Pipeline c4eeb77de3ac1155bcbe855db33542f8 https://www.encodeproject.org/files/ENCFF542SNG/@@download/ENCFF542SNG.bigBed hg19 archived low read depth, low read length missing control alignments ENCFF126QDQ bigBed narrowPeak peaks ENCSR557RVF ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZHX1-human ENCAB361RPF DNA False 2014-07-07 ENCODE 1 ENCFF349DOV 11043673 ENCODE Processing Pipeline 28df6ec81d5cbfade5973b2551e03d96 https://www.encodeproject.org/files/ENCFF126QDQ/@@download/ENCFF126QDQ.bigBed hg19 archived low read depth, low read length missing control alignments ENCFF697UJF bigBed narrowPeak peaks ENCSR557RVF ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZHX1-human ENCAB361RPF DNA False 2014-07-07 ENCODE 1, 3 ENCFF207BTX 13447250 ENCODE Processing Pipeline 4b548f764ae1b0aafbcc8a3d280c396b https://www.encodeproject.org/files/ENCFF697UJF/@@download/ENCFF697UJF.bigBed hg19 archived low read depth, low read length missing control alignments ENCFF373KYE bam unfiltered alignments ENCSR557RVF ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZHX1-human ENCAB361RPF DNA False 2014-07-07 ENCODE 1 36 ENCFF002EES, ENCFF643CGH 1193532006 ENCODE Processing Pipeline e5bea9aee9c483c1771d4e9eb304805e https://www.encodeproject.org/files/ENCFF373KYE/@@download/ENCFF373KYE.bam GRCh38 released low read depth, low read length missing control alignments ENCFF573IUA bam unfiltered alignments ENCSR557RVF ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZHX1-human ENCAB361RPF DNA False 2014-07-07 ENCODE 3 36 ENCFF002EET, ENCFF643CGH 1343260623 ENCODE Processing Pipeline 243fbb6f9ec621f51828f490162834d9 https://www.encodeproject.org/files/ENCFF573IUA/@@download/ENCFF573IUA.bam GRCh38 released low read depth, low read length missing control alignments ENCFF723QZO bam alignments ENCSR557RVF ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZHX1-human ENCAB361RPF DNA False 2014-07-07 ENCODE 1 36 ENCFF002EES, ENCFF643CGH 780164998 ENCODE Processing Pipeline 90050b34443bd8d8af45808a1d169b2a https://www.encodeproject.org/files/ENCFF723QZO/@@download/ENCFF723QZO.bam GRCh38 released low read depth, low read length missing control alignments ENCFF019PLG bam alignments ENCSR557RVF ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZHX1-human ENCAB361RPF DNA False 2014-07-07 ENCODE 3 36 ENCFF002EET, ENCFF643CGH 949517486 ENCODE Processing Pipeline fe88491db2639d100a87088ad62b7e86 https://www.encodeproject.org/files/ENCFF019PLG/@@download/ENCFF019PLG.bam GRCh38 released low read depth, low read length missing control alignments ENCFF230KJV bigWig signal p-value ENCSR557RVF ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZHX1-human ENCAB361RPF DNA False 2014-07-07 ENCODE 1 ENCFF723QZO 463998331 ENCODE Processing Pipeline cf78948a9d9eb7ecf1615abbf918b50e https://www.encodeproject.org/files/ENCFF230KJV/@@download/ENCFF230KJV.bigWig GRCh38 released low read depth, low read length missing control alignments ENCFF486ZAJ bigWig signal p-value ENCSR557RVF ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZHX1-human ENCAB361RPF DNA False 2014-07-07 ENCODE 3 ENCFF019PLG 531082069 ENCODE Processing Pipeline bed80eacee7975ee34f2846eb2cc8e36 https://www.encodeproject.org/files/ENCFF486ZAJ/@@download/ENCFF486ZAJ.bigWig GRCh38 released low read depth, low read length missing control alignments ENCFF977HVC bigWig signal p-value ENCSR557RVF ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZHX1-human ENCAB361RPF DNA False 2014-07-07 ENCODE 1, 3 ENCFF019PLG, ENCFF723QZO 992898202 ENCODE Processing Pipeline 3ca59bc94424a83183d0f4ffbc5bb75e https://www.encodeproject.org/files/ENCFF977HVC/@@download/ENCFF977HVC.bigWig GRCh38 released low read depth, low read length missing control alignments ENCFF987VLT bigWig fold change over control ENCSR557RVF ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZHX1-human ENCAB361RPF DNA False 2014-07-07 ENCODE 1 ENCFF723QZO 440522614 ENCODE Processing Pipeline 4f6f4676e10c7c9915b0326561480d68 https://www.encodeproject.org/files/ENCFF987VLT/@@download/ENCFF987VLT.bigWig GRCh38 released low read depth, low read length missing control alignments ENCFF081NBD bigWig fold change over control ENCSR557RVF ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZHX1-human ENCAB361RPF DNA False 2014-07-07 ENCODE 3 ENCFF019PLG 487466625 ENCODE Processing Pipeline 7fa945bde5b95d517f4dc1b6002ac58f https://www.encodeproject.org/files/ENCFF081NBD/@@download/ENCFF081NBD.bigWig GRCh38 released low read depth, low read length missing control alignments ENCFF255VEW bigWig fold change over control ENCSR557RVF ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZHX1-human ENCAB361RPF DNA False 2014-07-07 ENCODE 1, 3 ENCFF019PLG, ENCFF723QZO 1050649101 ENCODE Processing Pipeline cf1e11649c18d041021b78754b7ef2f5 https://www.encodeproject.org/files/ENCFF255VEW/@@download/ENCFF255VEW.bigWig GRCh38 released low read depth, low read length missing control alignments ENCFF533DZJ bed narrowPeak peaks ENCSR557RVF ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZHX1-human ENCAB361RPF DNA False 2014-07-07 ENCODE 1 ENCFF723QZO 4678629 ENCODE Processing Pipeline 8506ba966dbf6e8327d47dadc58561c1 https://www.encodeproject.org/files/ENCFF533DZJ/@@download/ENCFF533DZJ.bed.gz GRCh38 released low read depth, low read length missing control alignments ENCFF934QVF bed narrowPeak peaks ENCSR557RVF ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZHX1-human ENCAB361RPF DNA False 2014-07-07 ENCODE 3 ENCFF019PLG 5179144 ENCODE Processing Pipeline 47129b10bfb1bb266476ea39936c8ae9 https://www.encodeproject.org/files/ENCFF934QVF/@@download/ENCFF934QVF.bed.gz GRCh38 released low read depth, low read length missing control alignments ENCFF553ZMC bigBed narrowPeak peaks ENCSR557RVF ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZHX1-human ENCAB361RPF DNA False 2014-07-07 ENCODE 1 ENCFF533DZJ 10864156 ENCODE Processing Pipeline bfabe28f7ab2937509e0d646c01c4e24 https://www.encodeproject.org/files/ENCFF553ZMC/@@download/ENCFF553ZMC.bigBed GRCh38 released low read depth, low read length missing control alignments ENCFF415SNS bigBed narrowPeak peaks ENCSR557RVF ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZHX1-human ENCAB361RPF DNA False 2014-07-07 ENCODE 3 ENCFF934QVF 11085096 ENCODE Processing Pipeline 0d834b96524e7ceac2527b69d68af96f https://www.encodeproject.org/files/ENCFF415SNS/@@download/ENCFF415SNS.bigBed GRCh38 released low read depth, low read length missing control alignments ENCFF622ORP bigBed narrowPeak peaks ENCSR557RVF ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZHX1-human ENCAB361RPF DNA False 2014-07-07 ENCODE 1, 3 ENCFF991DCR 13447926 ENCODE Processing Pipeline ce9236fdb4d58fc9222d8711fdabcab3 https://www.encodeproject.org/files/ENCFF622ORP/@@download/ENCFF622ORP.bigBed GRCh38 released low read depth, low read length missing control alignments ENCFF991DCR bed narrowPeak peaks ENCSR557RVF ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZHX1-human ENCAB361RPF DNA False 2014-07-07 ENCODE 1, 3 ENCFF019PLG, ENCFF723QZO 6410222 ENCODE Processing Pipeline 4f2cda43258cb7efbaa7bc1b27119059 https://www.encodeproject.org/files/ENCFF991DCR/@@download/ENCFF991DCR.bed.gz GRCh38 released low read depth, low read length missing control alignments ENCFF376CAG bed narrowPeak conservative idr thresholded peaks ENCSR557RVF ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZHX1-human ENCAB361RPF DNA False 2014-07-07 ENCODE 1, 3 ENCFF419RSJ, ENCFF533DZJ, ENCFF934QVF, ENCFF991DCR 50866 ENCODE Processing Pipeline 7e24417837434d49700cb933b824fd7e https://www.encodeproject.org/files/ENCFF376CAG/@@download/ENCFF376CAG.bed.gz GRCh38 released low read depth, low read length missing control alignments ENCFF684WYK bigBed narrowPeak conservative idr thresholded peaks ENCSR557RVF ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZHX1-human ENCAB361RPF DNA False 2014-07-07 ENCODE 1, 3 ENCFF376CAG 159425 ENCODE Processing Pipeline 202199ca312d545e61937fe96745ff7b https://www.encodeproject.org/files/ENCFF684WYK/@@download/ENCFF684WYK.bigBed GRCh38 released low read depth, low read length missing control alignments ENCFF835HVW bigBed narrowPeak optimal idr thresholded peaks ENCSR557RVF ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZHX1-human ENCAB361RPF DNA False 2014-07-07 ENCODE 1, 3 ENCFF495BPY 183904 ENCODE Processing Pipeline c47d5829155f771b8b8926d36859b50e https://www.encodeproject.org/files/ENCFF835HVW/@@download/ENCFF835HVW.bigBed GRCh38 released low read depth, low read length missing control alignments ENCFF495BPY bed narrowPeak optimal idr thresholded peaks ENCSR557RVF ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZHX1-human ENCAB361RPF DNA False 2014-07-07 ENCODE 1, 3 ENCFF419RSJ, ENCFF533DZJ, ENCFF934QVF, ENCFF991DCR 64861 ENCODE Processing Pipeline c8c48ba855f11cafe36a2332b9f617ab https://www.encodeproject.org/files/ENCFF495BPY/@@download/ENCFF495BPY.bed.gz GRCh38 released low read depth, low read length missing control alignments ENCFF223KKR bed narrowPeak optimal idr thresholded peaks ENCSR557RVF ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZHX1-human ENCAB361RPF DNA False 2014-07-07 ENCODE 1, 3 ENCFF001TDO, ENCFF076QRM, ENCFF207BTX, ENCFF349DOV 56943 ENCODE Processing Pipeline 1fb0605c8d59b50eb5d2ab330e5e849b https://www.encodeproject.org/files/ENCFF223KKR/@@download/ENCFF223KKR.bed.gz hg19 archived low read depth, low read length missing control alignments ENCFF851ICA bigBed narrowPeak conservative idr thresholded peaks ENCSR557RVF ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZHX1-human ENCAB361RPF DNA False 2014-07-07 ENCODE 1, 3 ENCFF519NQW 124342 ENCODE Processing Pipeline a7cb18f27cb223d56296fd13cdaf0eba https://www.encodeproject.org/files/ENCFF851ICA/@@download/ENCFF851ICA.bigBed hg19 archived low read depth, low read length missing control alignments ENCFF519NQW bed narrowPeak conservative idr thresholded peaks ENCSR557RVF ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZHX1-human ENCAB361RPF DNA False 2014-07-07 ENCODE 1, 3 ENCFF001TDO, ENCFF076QRM, ENCFF207BTX, ENCFF349DOV 43437 ENCODE Processing Pipeline 39b6c961d98a4133ee84974c428d7338 https://www.encodeproject.org/files/ENCFF519NQW/@@download/ENCFF519NQW.bed.gz hg19 archived low read depth, low read length missing control alignments ENCFF236JSK bigBed narrowPeak optimal idr thresholded peaks ENCSR557RVF ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZHX1-human ENCAB361RPF DNA False 2014-07-07 ENCODE 1, 3 ENCFF223KKR 142788 ENCODE Processing Pipeline 1205ad9c6099de2e4c74c2b39b1564ef https://www.encodeproject.org/files/ENCFF236JSK/@@download/ENCFF236JSK.bigBed hg19 archived low read depth, low read length missing control alignments ENCFF186GBM fastq reads ENCSR819LHG ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOXA1-human ENCAB301QLE DNA False 2016-11-17 ENCODE 1 1 100 paired-ended 2 ENCFF394CJB 3792137139 Michael Snyder, Stanford 08ed9903f4936127c45d1aca8c86e910 SRA:SRR5112151 https://www.encodeproject.org/files/ENCFF186GBM/@@download/ENCFF186GBM.fastq.gz Illumina HiSeq 2000 /files/ENCFF368UOC/ released mild to moderate bottlenecking ENCFF394CJB fastq reads ENCSR819LHG ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOXA1-human ENCAB301QLE DNA False 2016-11-17 ENCODE 1 1 100 paired-ended 1 ENCFF186GBM 3783411487 Michael Snyder, Stanford 262d8e2bc9d176c742fcc8ddb4a0e704 SRA:SRR5112151 https://www.encodeproject.org/files/ENCFF394CJB/@@download/ENCFF394CJB.fastq.gz Illumina HiSeq 2000 /files/ENCFF410PHD/ released mild to moderate bottlenecking ENCFF692TZI fastq reads ENCSR819LHG ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOXA1-human ENCAB301QLE DNA False 2016-11-17 ENCODE 2 1 100 paired-ended 1 ENCFF762YIW 3077055398 Michael Snyder, Stanford f2146b3ea7bb236c00d0c20199daf145 SRA:SRR5112152 https://www.encodeproject.org/files/ENCFF692TZI/@@download/ENCFF692TZI.fastq.gz Illumina HiSeq 2000 /files/ENCFF240DTE/ released mild to moderate bottlenecking ENCFF762YIW fastq reads ENCSR819LHG ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOXA1-human ENCAB301QLE DNA False 2016-11-17 ENCODE 2 1 100 paired-ended 2 ENCFF692TZI 3079188083 Michael Snyder, Stanford 27ba2875aea8d85a4a1366f1e5ed76d8 SRA:SRR5112152 https://www.encodeproject.org/files/ENCFF762YIW/@@download/ENCFF762YIW.fastq.gz Illumina HiSeq 2000 /files/ENCFF608MDV/ released mild to moderate bottlenecking ENCFF821DRJ bam unfiltered alignments ENCSR819LHG ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOXA1-human ENCAB301QLE DNA False 2016-11-17 ENCODE 2 100 ENCFF692TZI, ENCFF762YIW, ENCFF807MUK 6408418065 ENCODE Processing Pipeline dbc93e3a4e482daf6cfe358eb91c61c3 https://www.encodeproject.org/files/ENCFF821DRJ/@@download/ENCFF821DRJ.bam hg19 released mild to moderate bottlenecking ENCFF345KWK bam unfiltered alignments ENCSR819LHG ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOXA1-human ENCAB301QLE DNA False 2016-11-17 ENCODE 1 100 ENCFF186GBM, ENCFF394CJB, ENCFF807MUK 7781286548 ENCODE Processing Pipeline 12c76f38531ceff8a614a924b4fcc368 https://www.encodeproject.org/files/ENCFF345KWK/@@download/ENCFF345KWK.bam hg19 released mild to moderate bottlenecking ENCFF459WEJ bam alignments ENCSR819LHG ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOXA1-human ENCAB301QLE DNA False 2016-11-17 ENCODE 2 100 ENCFF692TZI, ENCFF762YIW, ENCFF807MUK 4409714980 ENCODE Processing Pipeline 33ec928c9e2891dbb6d83a63ffd2c47b https://www.encodeproject.org/files/ENCFF459WEJ/@@download/ENCFF459WEJ.bam hg19 released mild to moderate bottlenecking ENCFF134FYL bam unfiltered alignments ENCSR819LHG ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOXA1-human ENCAB301QLE DNA False 2016-11-17 ENCODE 2 100 ENCFF643CGH, ENCFF692TZI, ENCFF762YIW 6417666720 ENCODE Processing Pipeline 01ca3ec4396daee0ad29f1d5b8064121 https://www.encodeproject.org/files/ENCFF134FYL/@@download/ENCFF134FYL.bam GRCh38 released mild to moderate bottlenecking ENCFF009OHH bam unfiltered alignments ENCSR819LHG ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOXA1-human ENCAB301QLE DNA False 2016-11-17 ENCODE 1 100 ENCFF186GBM, ENCFF394CJB, ENCFF643CGH 7792772409 ENCODE Processing Pipeline 41a87a8a0bd4dba48effe0e7a2ef337e https://www.encodeproject.org/files/ENCFF009OHH/@@download/ENCFF009OHH.bam GRCh38 released mild to moderate bottlenecking ENCFF926PMG bam alignments ENCSR819LHG ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOXA1-human ENCAB301QLE DNA False 2016-11-17 ENCODE 1 100 ENCFF186GBM, ENCFF394CJB, ENCFF807MUK 5406362865 ENCODE Processing Pipeline f23b4d5ee3ab7f2700afdde546671261 https://www.encodeproject.org/files/ENCFF926PMG/@@download/ENCFF926PMG.bam hg19 released mild to moderate bottlenecking ENCFF364SJK bam alignments ENCSR819LHG ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOXA1-human ENCAB301QLE DNA False 2016-11-17 ENCODE 2 100 ENCFF643CGH, ENCFF692TZI, ENCFF762YIW 4411681149 ENCODE Processing Pipeline f1b53ba60a083375d5f08982e907f8f8 https://www.encodeproject.org/files/ENCFF364SJK/@@download/ENCFF364SJK.bam GRCh38 released mild to moderate bottlenecking ENCFF611PXX bam alignments ENCSR819LHG ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOXA1-human ENCAB301QLE DNA False 2016-11-17 ENCODE 1 100 ENCFF186GBM, ENCFF394CJB, ENCFF643CGH 5409274518 ENCODE Processing Pipeline d70496bf33fb7e117bef5543532cca57 https://www.encodeproject.org/files/ENCFF611PXX/@@download/ENCFF611PXX.bam GRCh38 released mild to moderate bottlenecking ENCFF311IHN bigWig signal p-value ENCSR819LHG ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOXA1-human ENCAB301QLE DNA False 2016-11-17 ENCODE 1 ENCFF611PXX, ENCFF720AUK, ENCFF796JTX 1336990881 ENCODE Processing Pipeline 5586ab92eacf2f5488dd43f2944d6460 https://www.encodeproject.org/files/ENCFF311IHN/@@download/ENCFF311IHN.bigWig GRCh38 released mild to moderate bottlenecking ENCFF361ACG bigWig signal p-value ENCSR819LHG ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOXA1-human ENCAB301QLE DNA False 2016-11-17 ENCODE 2 ENCFF364SJK, ENCFF720AUK, ENCFF796JTX 1318008362 ENCODE Processing Pipeline dfb7bb36fdc38a2b8a6919d00519857c https://www.encodeproject.org/files/ENCFF361ACG/@@download/ENCFF361ACG.bigWig GRCh38 released mild to moderate bottlenecking ENCFF966HWQ bigWig signal p-value ENCSR819LHG ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOXA1-human ENCAB301QLE DNA False 2016-11-17 ENCODE 1, 2 ENCFF364SJK, ENCFF611PXX, ENCFF720AUK, ENCFF796JTX 1467068929 ENCODE Processing Pipeline fe497f6ed261340c456a0e5bd360d90a https://www.encodeproject.org/files/ENCFF966HWQ/@@download/ENCFF966HWQ.bigWig GRCh38 released mild to moderate bottlenecking ENCFF589JOA bigWig fold change over control ENCSR819LHG ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOXA1-human ENCAB301QLE DNA False 2016-11-17 ENCODE 1 ENCFF611PXX, ENCFF720AUK, ENCFF796JTX 1394287098 ENCODE Processing Pipeline 018463d64350b996ea42d46f398787a0 https://www.encodeproject.org/files/ENCFF589JOA/@@download/ENCFF589JOA.bigWig GRCh38 released mild to moderate bottlenecking ENCFF337NGR bigWig fold change over control ENCSR819LHG ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOXA1-human ENCAB301QLE DNA False 2016-11-17 ENCODE 2 ENCFF364SJK, ENCFF720AUK, ENCFF796JTX 1231941082 ENCODE Processing Pipeline a8ef4d3b8ecfdb8374dca8486007c3d5 https://www.encodeproject.org/files/ENCFF337NGR/@@download/ENCFF337NGR.bigWig GRCh38 released mild to moderate bottlenecking ENCFF589LQL bigWig fold change over control ENCSR819LHG ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOXA1-human ENCAB301QLE DNA False 2016-11-17 ENCODE 1, 2 ENCFF364SJK, ENCFF611PXX, ENCFF720AUK, ENCFF796JTX 1863615152 ENCODE Processing Pipeline 34df9e18eb9d42422a232ae146388ed8 https://www.encodeproject.org/files/ENCFF589LQL/@@download/ENCFF589LQL.bigWig GRCh38 released mild to moderate bottlenecking ENCFF621DBO bed narrowPeak peaks ENCSR819LHG ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOXA1-human ENCAB301QLE DNA False 2016-11-17 ENCODE 2 ENCFF364SJK, ENCFF720AUK, ENCFF796JTX 6075905 ENCODE Processing Pipeline 803ab312bbf60f761aa6ffa655ae3a85 https://www.encodeproject.org/files/ENCFF621DBO/@@download/ENCFF621DBO.bed.gz GRCh38 released mild to moderate bottlenecking ENCFF058MIV bed narrowPeak peaks ENCSR819LHG ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOXA1-human ENCAB301QLE DNA False 2016-11-17 ENCODE 1, 2 ENCFF364SJK, ENCFF611PXX, ENCFF720AUK, ENCFF796JTX 7020037 ENCODE Processing Pipeline c8bb7d8e6ff02df3f07a2e46a55cbf2b https://www.encodeproject.org/files/ENCFF058MIV/@@download/ENCFF058MIV.bed.gz GRCh38 released mild to moderate bottlenecking ENCFF689ZOM bed narrowPeak peaks ENCSR819LHG ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOXA1-human ENCAB301QLE DNA False 2016-11-17 ENCODE 1 ENCFF611PXX, ENCFF720AUK, ENCFF796JTX 6365495 ENCODE Processing Pipeline 4b21d147c72232e8e00388e6e9fb8a28 https://www.encodeproject.org/files/ENCFF689ZOM/@@download/ENCFF689ZOM.bed.gz GRCh38 released mild to moderate bottlenecking ENCFF248UZK bigBed narrowPeak peaks ENCSR819LHG ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOXA1-human ENCAB301QLE DNA False 2016-11-17 ENCODE 2 ENCFF621DBO 11233087 ENCODE Processing Pipeline d0106f2e3e94dd52d2206194821817e9 https://www.encodeproject.org/files/ENCFF248UZK/@@download/ENCFF248UZK.bigBed GRCh38 released mild to moderate bottlenecking ENCFF006DZW bigBed narrowPeak peaks ENCSR819LHG ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOXA1-human ENCAB301QLE DNA False 2016-11-17 ENCODE 1 ENCFF689ZOM 11229846 ENCODE Processing Pipeline f0a4dcd68736bcf4ce1b966dee19868e https://www.encodeproject.org/files/ENCFF006DZW/@@download/ENCFF006DZW.bigBed GRCh38 released mild to moderate bottlenecking ENCFF293OGY bigBed narrowPeak peaks ENCSR819LHG ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOXA1-human ENCAB301QLE DNA False 2016-11-17 ENCODE 1, 2 ENCFF058MIV 11362695 ENCODE Processing Pipeline 704c7dea363087fcc1de57c5b2d7ae66 https://www.encodeproject.org/files/ENCFF293OGY/@@download/ENCFF293OGY.bigBed GRCh38 released mild to moderate bottlenecking ENCFF201FXV bigBed narrowPeak conservative idr thresholded peaks ENCSR819LHG ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOXA1-human ENCAB301QLE DNA False 2016-11-17 ENCODE 1, 2 ENCFF443TUR 73892 ENCODE Processing Pipeline faf18f7a66423f6e445da007277fc803 https://www.encodeproject.org/files/ENCFF201FXV/@@download/ENCFF201FXV.bigBed GRCh38 released mild to moderate bottlenecking ENCFF443TUR bed narrowPeak conservative idr thresholded peaks ENCSR819LHG ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOXA1-human ENCAB301QLE DNA False 2016-11-17 ENCODE 1, 2 ENCFF058MIV, ENCFF419RSJ, ENCFF621DBO, ENCFF689ZOM 17608 ENCODE Processing Pipeline 1529c8c190aa22eaf4339f61d5a577c7 https://www.encodeproject.org/files/ENCFF443TUR/@@download/ENCFF443TUR.bed.gz GRCh38 released mild to moderate bottlenecking ENCFF765NAN bed narrowPeak optimal idr thresholded peaks ENCSR819LHG ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOXA1-human ENCAB301QLE DNA False 2016-11-17 ENCODE 1, 2 ENCFF058MIV, ENCFF419RSJ, ENCFF621DBO, ENCFF689ZOM 26015 ENCODE Processing Pipeline 7adb246f7f66d376afbf4f862b272fbc https://www.encodeproject.org/files/ENCFF765NAN/@@download/ENCFF765NAN.bed.gz GRCh38 released mild to moderate bottlenecking ENCFF518MXO bigBed narrowPeak optimal idr thresholded peaks ENCSR819LHG ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOXA1-human ENCAB301QLE DNA False 2016-11-17 ENCODE 1, 2 ENCFF765NAN 85828 ENCODE Processing Pipeline ffba242b2fd6cd5f462d330662fd854a https://www.encodeproject.org/files/ENCFF518MXO/@@download/ENCFF518MXO.bigBed GRCh38 released mild to moderate bottlenecking ENCFF357BZY bigWig signal p-value ENCSR819LHG ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOXA1-human ENCAB301QLE DNA False 2016-11-17 ENCODE 1 ENCFF262CJE, ENCFF506DFV, ENCFF926PMG 1490539205 ENCODE Processing Pipeline 37b8afd6db605088fe59db4778cd92c3 https://www.encodeproject.org/files/ENCFF357BZY/@@download/ENCFF357BZY.bigWig hg19 released mild to moderate bottlenecking ENCFF683KSH bigWig signal p-value ENCSR819LHG ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOXA1-human ENCAB301QLE DNA False 2016-11-17 ENCODE 2 ENCFF262CJE, ENCFF459WEJ, ENCFF506DFV 1288659170 ENCODE Processing Pipeline 999ac9f8385531d350be67dddb74181e https://www.encodeproject.org/files/ENCFF683KSH/@@download/ENCFF683KSH.bigWig hg19 released mild to moderate bottlenecking ENCFF916GEK bigWig signal p-value ENCSR819LHG ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOXA1-human ENCAB301QLE DNA False 2016-11-17 ENCODE 1, 2 ENCFF262CJE, ENCFF459WEJ, ENCFF506DFV, ENCFF926PMG 1503845862 ENCODE Processing Pipeline bc47023d695e14379139303212a9db36 https://www.encodeproject.org/files/ENCFF916GEK/@@download/ENCFF916GEK.bigWig hg19 released mild to moderate bottlenecking ENCFF395QUD bigWig fold change over control ENCSR819LHG ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOXA1-human ENCAB301QLE DNA False 2016-11-17 ENCODE 1 ENCFF262CJE, ENCFF506DFV, ENCFF926PMG 1411547637 ENCODE Processing Pipeline 63ae76bc4826cbd100e0edd89b010776 https://www.encodeproject.org/files/ENCFF395QUD/@@download/ENCFF395QUD.bigWig hg19 released mild to moderate bottlenecking ENCFF217XVH bigWig fold change over control ENCSR819LHG ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOXA1-human ENCAB301QLE DNA False 2016-11-17 ENCODE 2 ENCFF262CJE, ENCFF459WEJ, ENCFF506DFV 1234384811 ENCODE Processing Pipeline 39c9be313eafc2f9def37c1a0dcd58d4 https://www.encodeproject.org/files/ENCFF217XVH/@@download/ENCFF217XVH.bigWig hg19 released mild to moderate bottlenecking ENCFF147BRO bigWig fold change over control ENCSR819LHG ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOXA1-human ENCAB301QLE DNA False 2016-11-17 ENCODE 1, 2 ENCFF262CJE, ENCFF459WEJ, ENCFF506DFV, ENCFF926PMG 1863198011 ENCODE Processing Pipeline d4d0517327762779a4e2a62f2646c40c https://www.encodeproject.org/files/ENCFF147BRO/@@download/ENCFF147BRO.bigWig hg19 released mild to moderate bottlenecking ENCFF996FCB bed narrowPeak peaks ENCSR819LHG ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOXA1-human ENCAB301QLE DNA False 2016-11-17 ENCODE 2 ENCFF262CJE, ENCFF459WEJ, ENCFF506DFV 6072101 ENCODE Processing Pipeline 6a573d9edf0d948d5d9e9723b9b2c238 https://www.encodeproject.org/files/ENCFF996FCB/@@download/ENCFF996FCB.bed.gz hg19 released mild to moderate bottlenecking ENCFF113ZZY bed narrowPeak peaks ENCSR819LHG ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOXA1-human ENCAB301QLE DNA False 2016-11-17 ENCODE 1 ENCFF262CJE, ENCFF506DFV, ENCFF926PMG 6362678 ENCODE Processing Pipeline 00f61c261bb370338c498caa0b167c0f https://www.encodeproject.org/files/ENCFF113ZZY/@@download/ENCFF113ZZY.bed.gz hg19 released mild to moderate bottlenecking ENCFF837QWL bed narrowPeak peaks ENCSR819LHG ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOXA1-human ENCAB301QLE DNA False 2016-11-17 ENCODE 1, 2 ENCFF262CJE, ENCFF459WEJ, ENCFF506DFV, ENCFF926PMG 7014363 ENCODE Processing Pipeline 9eb17206026c620ac90dc15fe407e37f https://www.encodeproject.org/files/ENCFF837QWL/@@download/ENCFF837QWL.bed.gz hg19 released mild to moderate bottlenecking ENCFF609GBJ bigBed narrowPeak peaks ENCSR819LHG ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOXA1-human ENCAB301QLE DNA False 2016-11-17 ENCODE 1 ENCFF113ZZY 11214292 ENCODE Processing Pipeline a4b46676d99169644334324382c78a38 https://www.encodeproject.org/files/ENCFF609GBJ/@@download/ENCFF609GBJ.bigBed hg19 released mild to moderate bottlenecking ENCFF350IYW bigBed narrowPeak peaks ENCSR819LHG ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOXA1-human ENCAB301QLE DNA False 2016-11-17 ENCODE 2 ENCFF996FCB 11217491 ENCODE Processing Pipeline 557420a78786bc498a03a935bb55c647 https://www.encodeproject.org/files/ENCFF350IYW/@@download/ENCFF350IYW.bigBed hg19 released mild to moderate bottlenecking ENCFF457LHY bigBed narrowPeak peaks ENCSR819LHG ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOXA1-human ENCAB301QLE DNA False 2016-11-17 ENCODE 1, 2 ENCFF837QWL 11344610 ENCODE Processing Pipeline c8a9b95e8131ef00c48bfa94c3b36cd0 https://www.encodeproject.org/files/ENCFF457LHY/@@download/ENCFF457LHY.bigBed hg19 released mild to moderate bottlenecking ENCFF547KFA bed narrowPeak conservative idr thresholded peaks ENCSR819LHG ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOXA1-human ENCAB301QLE DNA False 2016-11-17 ENCODE 1, 2 ENCFF001TDO, ENCFF113ZZY, ENCFF837QWL, ENCFF996FCB 17860 ENCODE Processing Pipeline 0f34fc97d6b1cdb9ff9fef2b0edc9593 https://www.encodeproject.org/files/ENCFF547KFA/@@download/ENCFF547KFA.bed.gz hg19 released mild to moderate bottlenecking ENCFF261LDJ bigBed narrowPeak conservative idr thresholded peaks ENCSR819LHG ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOXA1-human ENCAB301QLE DNA False 2016-11-17 ENCODE 1, 2 ENCFF547KFA 73253 ENCODE Processing Pipeline 9beb7894bd00de72fa23b12dd35f511a https://www.encodeproject.org/files/ENCFF261LDJ/@@download/ENCFF261LDJ.bigBed hg19 released mild to moderate bottlenecking ENCFF809YFY bed narrowPeak optimal idr thresholded peaks ENCSR819LHG ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOXA1-human ENCAB301QLE DNA False 2016-11-17 ENCODE 1, 2 ENCFF001TDO, ENCFF113ZZY, ENCFF837QWL, ENCFF996FCB 26422 ENCODE Processing Pipeline 853ae621eda61d33788aa4e3acaa8aba https://www.encodeproject.org/files/ENCFF809YFY/@@download/ENCFF809YFY.bed.gz hg19 released mild to moderate bottlenecking ENCFF668TIT bigBed narrowPeak optimal idr thresholded peaks ENCSR819LHG ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOXA1-human ENCAB301QLE DNA False 2016-11-17 ENCODE 1, 2 ENCFF809YFY 84881 ENCODE Processing Pipeline ac30363e974ea3708ad8992411aeea99 https://www.encodeproject.org/files/ENCFF668TIT/@@download/ENCFF668TIT.bigBed hg19 released mild to moderate bottlenecking ENCFF310ZRA bam unfiltered alignments ENCSR099NCH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF24-human ENCAB860XUX DNA False 2016-07-28 ENCODE 1 100 ENCFF711HKZ, ENCFF715IBV, ENCFF807MUK 4258779237 ENCODE Processing Pipeline 0da526c5469b0d98336166beb9d6754f https://www.encodeproject.org/files/ENCFF310ZRA/@@download/ENCFF310ZRA.bam hg19 released low read depth missing control alignments ENCFF573AQG bam unfiltered alignments ENCSR099NCH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF24-human ENCAB860XUX DNA False 2016-07-28 ENCODE 2 100 ENCFF645HBN, ENCFF807MUK, ENCFF890KLF 3261571622 ENCODE Processing Pipeline 037e222d70d7e93a9c777fba9e5668af https://www.encodeproject.org/files/ENCFF573AQG/@@download/ENCFF573AQG.bam hg19 released low read depth missing control alignments ENCFF645HBN fastq reads ENCSR099NCH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF24-human ENCAB860XUX DNA False 2016-07-28 ENCODE 2 1 100 paired-ended 2 ENCFF890KLF 1483409393 Michael Snyder, Stanford 1ce4a3ab109fd0f379e38d6929e35430 SRA:SRR5111106 https://www.encodeproject.org/files/ENCFF645HBN/@@download/ENCFF645HBN.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFA/ released low read depth missing control alignments ENCFF715IBV fastq reads ENCSR099NCH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF24-human ENCAB860XUX DNA False 2016-07-28 ENCODE 1 1 100 paired-ended 2 ENCFF711HKZ 1977538350 Michael Snyder, Stanford cfe4adff9421a1eb4bfaf5b2bd377bed SRA:SRR5111105 https://www.encodeproject.org/files/ENCFF715IBV/@@download/ENCFF715IBV.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFH/ released low read depth missing control alignments ENCFF711HKZ fastq reads ENCSR099NCH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF24-human ENCAB860XUX DNA False 2016-07-28 ENCODE 1 1 100 paired-ended 1 ENCFF715IBV 1923841501 Michael Snyder, Stanford fedf288c5e0c3e7e520ef679755c481d SRA:SRR5111105 https://www.encodeproject.org/files/ENCFF711HKZ/@@download/ENCFF711HKZ.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFF/ released low read depth missing control alignments ENCFF890KLF fastq reads ENCSR099NCH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF24-human ENCAB860XUX DNA False 2016-07-28 ENCODE 2 1 100 paired-ended 1 ENCFF645HBN 1428020487 Michael Snyder, Stanford 175eac97e1896f8a17f5404594e926e4 SRA:SRR5111106 https://www.encodeproject.org/files/ENCFF890KLF/@@download/ENCFF890KLF.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFD/ released low read depth missing control alignments ENCFF349GIB bam alignments ENCSR099NCH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF24-human ENCAB860XUX DNA False 2016-07-28 ENCODE 2 100 ENCFF645HBN, ENCFF807MUK, ENCFF890KLF 2835939759 ENCODE Processing Pipeline 8660a1f54ccbcf82edb1f72bab31db57 https://www.encodeproject.org/files/ENCFF349GIB/@@download/ENCFF349GIB.bam hg19 released low read depth missing control alignments ENCFF045NGS bam alignments ENCSR099NCH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF24-human ENCAB860XUX DNA False 2016-07-28 ENCODE 1 100 ENCFF711HKZ, ENCFF715IBV, ENCFF807MUK 3609436137 ENCODE Processing Pipeline 0958e21bb8a25ecddda79ea3d26b5d0e https://www.encodeproject.org/files/ENCFF045NGS/@@download/ENCFF045NGS.bam hg19 released low read depth missing control alignments ENCFF547KLI bigWig signal p-value ENCSR099NCH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF24-human ENCAB860XUX DNA False 2016-07-28 ENCODE 1 ENCFF045NGS, ENCFF581ZJL 1007964017 ENCODE Processing Pipeline 607a1d8a0c204c85364ea2d39bf57890 https://www.encodeproject.org/files/ENCFF547KLI/@@download/ENCFF547KLI.bigWig hg19 released low read depth missing control alignments ENCFF153OEX bigWig signal p-value ENCSR099NCH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF24-human ENCAB860XUX DNA False 2016-07-28 ENCODE 2 ENCFF051LWI, ENCFF349GIB 833426324 ENCODE Processing Pipeline dba6d2433cc759443a8554a5e9debf42 https://www.encodeproject.org/files/ENCFF153OEX/@@download/ENCFF153OEX.bigWig hg19 released low read depth missing control alignments ENCFF596SDW bigWig signal p-value ENCSR099NCH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF24-human ENCAB860XUX DNA False 2016-07-28 ENCODE 1, 2 ENCFF045NGS, ENCFF051LWI, ENCFF349GIB, ENCFF581ZJL 1886683189 ENCODE Processing Pipeline 56c7581f8e79a8ffed15d2600cf8d80c https://www.encodeproject.org/files/ENCFF596SDW/@@download/ENCFF596SDW.bigWig hg19 released low read depth missing control alignments ENCFF357GMM bigWig fold change over control ENCSR099NCH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF24-human ENCAB860XUX DNA False 2016-07-28 ENCODE 1 ENCFF045NGS, ENCFF581ZJL 1113271211 ENCODE Processing Pipeline 233911baf713f9b226dd48c672df7335 https://www.encodeproject.org/files/ENCFF357GMM/@@download/ENCFF357GMM.bigWig hg19 released low read depth missing control alignments ENCFF137RWM bigWig fold change over control ENCSR099NCH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF24-human ENCAB860XUX DNA False 2016-07-28 ENCODE 2 ENCFF051LWI, ENCFF349GIB 970001629 ENCODE Processing Pipeline 39ad091a002aba403f2372d1a7b8e0c9 https://www.encodeproject.org/files/ENCFF137RWM/@@download/ENCFF137RWM.bigWig hg19 released low read depth missing control alignments ENCFF965WZE bigWig fold change over control ENCSR099NCH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF24-human ENCAB860XUX DNA False 2016-07-28 ENCODE 1, 2 ENCFF045NGS, ENCFF051LWI, ENCFF349GIB, ENCFF581ZJL 1929242193 ENCODE Processing Pipeline 5b71a1a83f44144c4c2fee4ff39ef18e https://www.encodeproject.org/files/ENCFF965WZE/@@download/ENCFF965WZE.bigWig hg19 released low read depth missing control alignments ENCFF131ZOO bed narrowPeak peaks ENCSR099NCH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF24-human ENCAB860XUX DNA False 2016-07-28 ENCODE 1 ENCFF045NGS, ENCFF581ZJL 7152432 ENCODE Processing Pipeline 022b59d0cfcc0164573c320d5b12e414 https://www.encodeproject.org/files/ENCFF131ZOO/@@download/ENCFF131ZOO.bed.gz hg19 released low read depth missing control alignments ENCFF985JTP bigBed narrowPeak peaks ENCSR099NCH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF24-human ENCAB860XUX DNA False 2016-07-28 ENCODE 1 ENCFF131ZOO 12844346 ENCODE Processing Pipeline 54c020dbf6bef582f2d5a00447d35867 https://www.encodeproject.org/files/ENCFF985JTP/@@download/ENCFF985JTP.bigBed hg19 released low read depth missing control alignments ENCFF716AIG bed narrowPeak peaks ENCSR099NCH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF24-human ENCAB860XUX DNA False 2016-07-28 ENCODE 2 ENCFF051LWI, ENCFF349GIB 7115295 ENCODE Processing Pipeline e9e72796ae9f43e88c1043dfb722ab1f https://www.encodeproject.org/files/ENCFF716AIG/@@download/ENCFF716AIG.bed.gz hg19 released low read depth missing control alignments ENCFF877PNB bed narrowPeak peaks ENCSR099NCH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF24-human ENCAB860XUX DNA False 2016-07-28 ENCODE 1, 2 ENCFF045NGS, ENCFF051LWI, ENCFF349GIB, ENCFF581ZJL 7258123 ENCODE Processing Pipeline 3b3b1152258dd1fb93fc01cea2dc3b3f https://www.encodeproject.org/files/ENCFF877PNB/@@download/ENCFF877PNB.bed.gz hg19 released low read depth missing control alignments ENCFF955JOG bigBed narrowPeak peaks ENCSR099NCH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF24-human ENCAB860XUX DNA False 2016-07-28 ENCODE 2 ENCFF716AIG 12701712 ENCODE Processing Pipeline 718c1a79e1e6cadb3e132b163479c185 https://www.encodeproject.org/files/ENCFF955JOG/@@download/ENCFF955JOG.bigBed hg19 released low read depth missing control alignments ENCFF056BBY bigBed narrowPeak peaks ENCSR099NCH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF24-human ENCAB860XUX DNA False 2016-07-28 ENCODE 1, 2 ENCFF877PNB 12612012 ENCODE Processing Pipeline 66a4d1b8729ffe39786f8066cc3cc494 https://www.encodeproject.org/files/ENCFF056BBY/@@download/ENCFF056BBY.bigBed hg19 released low read depth missing control alignments ENCFF031NVM bam unfiltered alignments ENCSR099NCH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF24-human ENCAB860XUX DNA False 2016-07-28 ENCODE 2 100 ENCFF643CGH, ENCFF645HBN, ENCFF890KLF 3264301156 ENCODE Processing Pipeline 82e40f6cf315c83ef52b5673bc258ee5 https://www.encodeproject.org/files/ENCFF031NVM/@@download/ENCFF031NVM.bam GRCh38 released low read depth missing control alignments ENCFF619PYG bam unfiltered alignments ENCSR099NCH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF24-human ENCAB860XUX DNA False 2016-07-28 ENCODE 1 100 ENCFF643CGH, ENCFF711HKZ, ENCFF715IBV 4261570400 ENCODE Processing Pipeline 9b2860ec9948248df0f8b77b2e281bad https://www.encodeproject.org/files/ENCFF619PYG/@@download/ENCFF619PYG.bam GRCh38 released low read depth missing control alignments ENCFF205VDU bam alignments ENCSR099NCH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF24-human ENCAB860XUX DNA False 2016-07-28 ENCODE 2 100 ENCFF643CGH, ENCFF645HBN, ENCFF890KLF 2836789006 ENCODE Processing Pipeline 4054a915e0d4ae05812f9cde717f4762 https://www.encodeproject.org/files/ENCFF205VDU/@@download/ENCFF205VDU.bam GRCh38 released low read depth missing control alignments ENCFF109OWW bam alignments ENCSR099NCH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF24-human ENCAB860XUX DNA False 2016-07-28 ENCODE 1 100 ENCFF643CGH, ENCFF711HKZ, ENCFF715IBV 3610399957 ENCODE Processing Pipeline c1225de37b097c34e6200c8a14a5166e https://www.encodeproject.org/files/ENCFF109OWW/@@download/ENCFF109OWW.bam GRCh38 released low read depth missing control alignments ENCFF274CVH bigWig signal p-value ENCSR099NCH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF24-human ENCAB860XUX DNA False 2016-07-28 ENCODE 1 ENCFF109OWW 1241138500 ENCODE Processing Pipeline c91a6e11928590cb01346868968298a3 https://www.encodeproject.org/files/ENCFF274CVH/@@download/ENCFF274CVH.bigWig GRCh38 released low read depth missing control alignments ENCFF366WBS bigWig signal p-value ENCSR099NCH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF24-human ENCAB860XUX DNA False 2016-07-28 ENCODE 2 ENCFF205VDU 1039458976 ENCODE Processing Pipeline 2aaa69805f87439f2b4803550cdfddf0 https://www.encodeproject.org/files/ENCFF366WBS/@@download/ENCFF366WBS.bigWig GRCh38 released low read depth missing control alignments ENCFF739KZJ bigWig signal p-value ENCSR099NCH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF24-human ENCAB860XUX DNA False 2016-07-28 ENCODE 1, 2 ENCFF109OWW, ENCFF205VDU 1632740532 ENCODE Processing Pipeline faf0a1c3b956f7c94f1ebd3afab1e961 https://www.encodeproject.org/files/ENCFF739KZJ/@@download/ENCFF739KZJ.bigWig GRCh38 released low read depth missing control alignments ENCFF674FKK bigWig fold change over control ENCSR099NCH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF24-human ENCAB860XUX DNA False 2016-07-28 ENCODE 1 ENCFF109OWW 1116264815 ENCODE Processing Pipeline 772f618204b26209faf877b974a7eaec https://www.encodeproject.org/files/ENCFF674FKK/@@download/ENCFF674FKK.bigWig GRCh38 released low read depth missing control alignments ENCFF087SZP bigWig fold change over control ENCSR099NCH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF24-human ENCAB860XUX DNA False 2016-07-28 ENCODE 2 ENCFF205VDU 978430173 ENCODE Processing Pipeline 460238852b2de8a6c63b587f89107453 https://www.encodeproject.org/files/ENCFF087SZP/@@download/ENCFF087SZP.bigWig GRCh38 released low read depth missing control alignments ENCFF042QGF bigWig fold change over control ENCSR099NCH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF24-human ENCAB860XUX DNA False 2016-07-28 ENCODE 1, 2 ENCFF109OWW, ENCFF205VDU 1922900708 ENCODE Processing Pipeline 5d711e9b389d3bb92ae3eaf2ffd9aabe https://www.encodeproject.org/files/ENCFF042QGF/@@download/ENCFF042QGF.bigWig GRCh38 released low read depth missing control alignments ENCFF577RMM bed narrowPeak peaks ENCSR099NCH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF24-human ENCAB860XUX DNA False 2016-07-28 ENCODE 1 ENCFF109OWW 7091293 ENCODE Processing Pipeline dc741022ab20d810ebe9b7d004aa9d47 https://www.encodeproject.org/files/ENCFF577RMM/@@download/ENCFF577RMM.bed.gz GRCh38 released low read depth missing control alignments ENCFF420TBJ bed narrowPeak peaks ENCSR099NCH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF24-human ENCAB860XUX DNA False 2016-07-28 ENCODE 2 ENCFF205VDU 7063665 ENCODE Processing Pipeline b2827728db30e54b6aa62dff650655ba https://www.encodeproject.org/files/ENCFF420TBJ/@@download/ENCFF420TBJ.bed.gz GRCh38 released low read depth missing control alignments ENCFF600USA bed narrowPeak peaks ENCSR099NCH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF24-human ENCAB860XUX DNA False 2016-07-28 ENCODE 1, 2 ENCFF109OWW, ENCFF205VDU 7226046 ENCODE Processing Pipeline ab5c33b904cbeb9e957f8d1a0d50e473 https://www.encodeproject.org/files/ENCFF600USA/@@download/ENCFF600USA.bed.gz GRCh38 released low read depth missing control alignments ENCFF907GJA bigBed narrowPeak peaks ENCSR099NCH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF24-human ENCAB860XUX DNA False 2016-07-28 ENCODE 1 ENCFF577RMM 12852043 ENCODE Processing Pipeline 6c23792a2f238a26bad251b35450e482 https://www.encodeproject.org/files/ENCFF907GJA/@@download/ENCFF907GJA.bigBed GRCh38 released low read depth missing control alignments ENCFF263BLM bigBed narrowPeak peaks ENCSR099NCH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF24-human ENCAB860XUX DNA False 2016-07-28 ENCODE 2 ENCFF420TBJ 12714133 ENCODE Processing Pipeline 354c6cce02433ce9260af9e1bdad7063 https://www.encodeproject.org/files/ENCFF263BLM/@@download/ENCFF263BLM.bigBed GRCh38 released low read depth missing control alignments ENCFF737PFG bigBed narrowPeak peaks ENCSR099NCH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF24-human ENCAB860XUX DNA False 2016-07-28 ENCODE 1, 2 ENCFF600USA 12593608 ENCODE Processing Pipeline ac6a2b03ffb82c9a943bfafccd6a82a5 https://www.encodeproject.org/files/ENCFF737PFG/@@download/ENCFF737PFG.bigBed GRCh38 released low read depth missing control alignments ENCFF394AJV bed narrowPeak conservative idr thresholded peaks ENCSR099NCH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF24-human ENCAB860XUX DNA False 2016-07-28 ENCODE 1, 2 ENCFF419RSJ, ENCFF420TBJ, ENCFF577RMM, ENCFF600USA 443437 ENCODE Processing Pipeline 21c603fc21897479d75361f2740eceef https://www.encodeproject.org/files/ENCFF394AJV/@@download/ENCFF394AJV.bed.gz GRCh38 released low read depth missing control alignments ENCFF267LTL bigBed narrowPeak conservative idr thresholded peaks ENCSR099NCH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF24-human ENCAB860XUX DNA False 2016-07-28 ENCODE 1, 2 ENCFF394AJV 1050119 ENCODE Processing Pipeline 3d2dc5c5ace4d53862f774a973758823 https://www.encodeproject.org/files/ENCFF267LTL/@@download/ENCFF267LTL.bigBed GRCh38 released low read depth missing control alignments ENCFF007EEV bed narrowPeak optimal idr thresholded peaks ENCSR099NCH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF24-human ENCAB860XUX DNA False 2016-07-28 ENCODE 1, 2 ENCFF419RSJ, ENCFF420TBJ, ENCFF577RMM, ENCFF600USA 489096 ENCODE Processing Pipeline d9037895850efa7df09bc263f8c6c129 https://www.encodeproject.org/files/ENCFF007EEV/@@download/ENCFF007EEV.bed.gz GRCh38 released low read depth missing control alignments ENCFF686QVV bigBed narrowPeak optimal idr thresholded peaks ENCSR099NCH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF24-human ENCAB860XUX DNA False 2016-07-28 ENCODE 1, 2 ENCFF007EEV 1137879 ENCODE Processing Pipeline e5c718f6c24aa55ab2984c2931b0e655 https://www.encodeproject.org/files/ENCFF686QVV/@@download/ENCFF686QVV.bigBed GRCh38 released low read depth missing control alignments ENCFF015AWN bed narrowPeak conservative idr thresholded peaks ENCSR099NCH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF24-human ENCAB860XUX DNA False 2016-07-28 ENCODE 1, 2 ENCFF001TDO, ENCFF131ZOO, ENCFF716AIG, ENCFF877PNB 372398 ENCODE Processing Pipeline ce33b81aff22f0d83233fef0a6edaa58 https://www.encodeproject.org/files/ENCFF015AWN/@@download/ENCFF015AWN.bed.gz hg19 released low read depth missing control alignments ENCFF974LSI bigBed narrowPeak conservative idr thresholded peaks ENCSR099NCH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF24-human ENCAB860XUX DNA False 2016-07-28 ENCODE 1, 2 ENCFF015AWN 764065 ENCODE Processing Pipeline cfeaf6514bfe203c1654aa3d509348f7 https://www.encodeproject.org/files/ENCFF974LSI/@@download/ENCFF974LSI.bigBed hg19 released low read depth missing control alignments ENCFF973LDQ bed narrowPeak optimal idr thresholded peaks ENCSR099NCH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF24-human ENCAB860XUX DNA False 2016-07-28 ENCODE 1, 2 ENCFF001TDO, ENCFF131ZOO, ENCFF716AIG, ENCFF877PNB 405803 ENCODE Processing Pipeline 5aced2d7e389eb5908524ecfd6ae9e02 https://www.encodeproject.org/files/ENCFF973LDQ/@@download/ENCFF973LDQ.bed.gz hg19 released low read depth missing control alignments ENCFF939RJD bigBed narrowPeak optimal idr thresholded peaks ENCSR099NCH ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF24-human ENCAB860XUX DNA False 2016-07-28 ENCODE 1, 2 ENCFF973LDQ 814904 ENCODE Processing Pipeline bcdfde7d735d776ceb7dc6888ce21f36 https://www.encodeproject.org/files/ENCFF939RJD/@@download/ENCFF939RJD.bigBed hg19 released low read depth missing control alignments ENCFF004DQS fastq reads ENCSR669NFS ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARNT-human ENCAB348OYH DNA False 2018-01-26 ENCODE 4 1 100 paired-ended 2 ENCFF806CEC 1821796750 Michael Snyder, Stanford 939d01f8199535c3a10291b06fc7c5a8 https://www.encodeproject.org/files/ENCFF004DQS/@@download/ENCFF004DQS.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFA/ released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF806CEC fastq reads ENCSR669NFS ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARNT-human ENCAB348OYH DNA False 2018-01-26 ENCODE 4 1 100 paired-ended 1 ENCFF004DQS 1776327663 Michael Snyder, Stanford 37910df82ac8e29d628af70a30b6accd https://www.encodeproject.org/files/ENCFF806CEC/@@download/ENCFF806CEC.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFD/ released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF023BWP fastq reads ENCSR669NFS ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARNT-human ENCAB348OYH DNA False 2018-01-26 ENCODE 3 1 100 paired-ended 2 ENCFF041PSD 2079235164 Michael Snyder, Stanford d482445349828da951ce58c9e9b520af https://www.encodeproject.org/files/ENCFF023BWP/@@download/ENCFF023BWP.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFH/ released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF041PSD fastq reads ENCSR669NFS ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARNT-human ENCAB348OYH DNA False 2018-01-26 ENCODE 3 1 100 paired-ended 1 ENCFF023BWP 2078019124 Michael Snyder, Stanford 244e6b1bb7ff2e94f0880eab129a4122 https://www.encodeproject.org/files/ENCFF041PSD/@@download/ENCFF041PSD.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFF/ released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF077QLY bam unfiltered alignments ENCSR669NFS ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARNT-human ENCAB348OYH DNA False 2018-01-26 ENCODE 3 100 ENCFF023BWP, ENCFF041PSD, ENCFF807MUK 4496438502 ENCODE Processing Pipeline add4a20271f2b302063da385dd609ff2 https://www.encodeproject.org/files/ENCFF077QLY/@@download/ENCFF077QLY.bam hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF558XCY bam alignments ENCSR669NFS ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARNT-human ENCAB348OYH DNA False 2018-01-26 ENCODE 3 100 ENCFF023BWP, ENCFF041PSD, ENCFF807MUK 3489702951 ENCODE Processing Pipeline 21a92b027233fdb287e9b718886ea073 https://www.encodeproject.org/files/ENCFF558XCY/@@download/ENCFF558XCY.bam hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF454DSR bam alignments ENCSR669NFS ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARNT-human ENCAB348OYH DNA False 2018-01-26 ENCODE 4 100 ENCFF004DQS, ENCFF643CGH, ENCFF806CEC 3278375464 ENCODE Processing Pipeline 63e32e928bfa31e604f941305866fa8b https://www.encodeproject.org/files/ENCFF454DSR/@@download/ENCFF454DSR.bam GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF373SGI bam unfiltered alignments ENCSR669NFS ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARNT-human ENCAB348OYH DNA False 2018-01-26 ENCODE 4 100 ENCFF004DQS, ENCFF806CEC, ENCFF807MUK 3955822542 ENCODE Processing Pipeline b37f6fedb43901c52a599506df2a1fb3 https://www.encodeproject.org/files/ENCFF373SGI/@@download/ENCFF373SGI.bam hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF733QFW bam unfiltered alignments ENCSR669NFS ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARNT-human ENCAB348OYH DNA False 2018-01-26 ENCODE 3 100 ENCFF023BWP, ENCFF041PSD, ENCFF643CGH 4499953611 ENCODE Processing Pipeline 32df496160486a0d4c268687f0669c78 https://www.encodeproject.org/files/ENCFF733QFW/@@download/ENCFF733QFW.bam GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF509BKM bam alignments ENCSR669NFS ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARNT-human ENCAB348OYH DNA False 2018-01-26 ENCODE 3 100 ENCFF023BWP, ENCFF041PSD, ENCFF643CGH 3491161037 ENCODE Processing Pipeline 14e70596573f1082e3c84c56515a6eaa https://www.encodeproject.org/files/ENCFF509BKM/@@download/ENCFF509BKM.bam GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF433HWM bam unfiltered alignments ENCSR669NFS ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARNT-human ENCAB348OYH DNA False 2018-01-26 ENCODE 4 100 ENCFF004DQS, ENCFF643CGH, ENCFF806CEC 3959605396 ENCODE Processing Pipeline 3a16e03b8a87fa61060c43c46eaaeecf https://www.encodeproject.org/files/ENCFF433HWM/@@download/ENCFF433HWM.bam GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF675CIQ bam alignments ENCSR669NFS ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARNT-human ENCAB348OYH DNA False 2018-01-26 ENCODE 4 100 ENCFF004DQS, ENCFF806CEC, ENCFF807MUK 3276801956 ENCODE Processing Pipeline 3bb76470b8fdf4455df912c28186a389 https://www.encodeproject.org/files/ENCFF675CIQ/@@download/ENCFF675CIQ.bam hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF754RTF bigWig signal p-value ENCSR669NFS ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARNT-human ENCAB348OYH DNA False 2018-01-26 ENCODE 3, 4 ENCFF051LWI, ENCFF558XCY, ENCFF581ZJL, ENCFF675CIQ 1815599717 ENCODE Processing Pipeline 503f778be7bd9c0cbb307eb3e2c732ea https://www.encodeproject.org/files/ENCFF754RTF/@@download/ENCFF754RTF.bigWig hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF493PTN bigWig fold change over control ENCSR669NFS ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARNT-human ENCAB348OYH DNA False 2018-01-26 ENCODE 4 ENCFF051LWI, ENCFF675CIQ 1025191184 ENCODE Processing Pipeline a5a41a6a2ddbb680f1e95de053793321 https://www.encodeproject.org/files/ENCFF493PTN/@@download/ENCFF493PTN.bigWig hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF643KYQ bigWig fold change over control ENCSR669NFS ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARNT-human ENCAB348OYH DNA False 2018-01-26 ENCODE 3, 4 ENCFF051LWI, ENCFF558XCY, ENCFF581ZJL, ENCFF675CIQ 1945401848 ENCODE Processing Pipeline 6605828288fdc4edb7faf54f808fee59 https://www.encodeproject.org/files/ENCFF643KYQ/@@download/ENCFF643KYQ.bigWig hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF333QJD bed narrowPeak peaks ENCSR669NFS ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARNT-human ENCAB348OYH DNA False 2018-01-26 ENCODE 3 ENCFF558XCY, ENCFF581ZJL 6318915 ENCODE Processing Pipeline eec9c719204fd3e601f578290d7056c6 https://www.encodeproject.org/files/ENCFF333QJD/@@download/ENCFF333QJD.bed.gz hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF024XWR bigWig fold change over control ENCSR669NFS ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARNT-human ENCAB348OYH DNA False 2018-01-26 ENCODE 4 ENCFF454DSR 1005568195 ENCODE Processing Pipeline 6c32c7323a7e4ecacf5ffc9da6461ece https://www.encodeproject.org/files/ENCFF024XWR/@@download/ENCFF024XWR.bigWig GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF805OZG bed narrowPeak peaks ENCSR669NFS ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARNT-human ENCAB348OYH DNA False 2018-01-26 ENCODE 4 ENCFF454DSR 6142300 ENCODE Processing Pipeline 816f429eabfa8e63676ccc1c202f8b4c https://www.encodeproject.org/files/ENCFF805OZG/@@download/ENCFF805OZG.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF578ZFO bed narrowPeak peaks ENCSR669NFS ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARNT-human ENCAB348OYH DNA False 2018-01-26 ENCODE 3, 4 ENCFF454DSR, ENCFF509BKM 7070458 ENCODE Processing Pipeline c4836d9bcaa0bf5a86dda9c5de9c70db https://www.encodeproject.org/files/ENCFF578ZFO/@@download/ENCFF578ZFO.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF159ZAQ bigBed narrowPeak peaks ENCSR669NFS ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARNT-human ENCAB348OYH DNA False 2018-01-26 ENCODE 3 ENCFF305MLA 13340543 ENCODE Processing Pipeline 0c5fc6c285a1350d76a9e97e2d9216da https://www.encodeproject.org/files/ENCFF159ZAQ/@@download/ENCFF159ZAQ.bigBed GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF968TKP bed narrowPeak peaks ENCSR669NFS ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARNT-human ENCAB348OYH DNA False 2018-01-26 ENCODE 3, 4 ENCFF051LWI, ENCFF558XCY, ENCFF581ZJL, ENCFF675CIQ 7071021 ENCODE Processing Pipeline 5437699270e023892b30040df7b557f5 https://www.encodeproject.org/files/ENCFF968TKP/@@download/ENCFF968TKP.bed.gz hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF944GZI bed narrowPeak optimal idr thresholded peaks ENCSR669NFS ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARNT-human ENCAB348OYH DNA False 2018-01-26 ENCODE 3, 4 ENCFF001TDO, ENCFF286UPH, ENCFF333QJD, ENCFF968TKP 115274 ENCODE Processing Pipeline 047a545f5de7e170d1e06e9dfe3ee10a https://www.encodeproject.org/files/ENCFF944GZI/@@download/ENCFF944GZI.bed.gz hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF305MLA bed narrowPeak peaks ENCSR669NFS ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARNT-human ENCAB348OYH DNA False 2018-01-26 ENCODE 3 ENCFF509BKM 6354629 ENCODE Processing Pipeline 6145dcbc4bd9ecd927d556f976472974 https://www.encodeproject.org/files/ENCFF305MLA/@@download/ENCFF305MLA.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF206XFK bigBed narrowPeak conservative idr thresholded peaks ENCSR669NFS ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARNT-human ENCAB348OYH DNA False 2018-01-26 ENCODE 3, 4 ENCFF108FQP 175316 ENCODE Processing Pipeline 4862f2246b73b0ebcec383bfe04e7e26 https://www.encodeproject.org/files/ENCFF206XFK/@@download/ENCFF206XFK.bigBed GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF913AQF bed narrowPeak optimal idr thresholded peaks ENCSR669NFS ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARNT-human ENCAB348OYH DNA False 2018-01-26 ENCODE 3, 4 ENCFF305MLA, ENCFF419RSJ, ENCFF578ZFO, ENCFF805OZG 113819 ENCODE Processing Pipeline 203a5e4e8b1b7299f993e8cccaa7642a https://www.encodeproject.org/files/ENCFF913AQF/@@download/ENCFF913AQF.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF657YVH bigWig fold change over control ENCSR669NFS ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARNT-human ENCAB348OYH DNA False 2018-01-26 ENCODE 3 ENCFF558XCY, ENCFF581ZJL 1036108575 ENCODE Processing Pipeline fe42bdcaf5db236bcf2c8a15f201faca https://www.encodeproject.org/files/ENCFF657YVH/@@download/ENCFF657YVH.bigWig hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF165MLQ bigBed narrowPeak peaks ENCSR669NFS ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARNT-human ENCAB348OYH DNA False 2018-01-26 ENCODE 3 ENCFF333QJD 13332770 ENCODE Processing Pipeline e66d2cedb385e174c5ced9e663e795a3 https://www.encodeproject.org/files/ENCFF165MLQ/@@download/ENCFF165MLQ.bigBed hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF987UTZ bigBed narrowPeak peaks ENCSR669NFS ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARNT-human ENCAB348OYH DNA False 2018-01-26 ENCODE 3, 4 ENCFF968TKP 13226217 ENCODE Processing Pipeline 81d1dd1f3f773022ba4ecad849eb0341 https://www.encodeproject.org/files/ENCFF987UTZ/@@download/ENCFF987UTZ.bigBed hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF261FOK bigBed narrowPeak optimal idr thresholded peaks ENCSR669NFS ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARNT-human ENCAB348OYH DNA False 2018-01-26 ENCODE 3, 4 ENCFF944GZI 258930 ENCODE Processing Pipeline 8be0ec480ea106c8b6a4c3f706d95cf3 https://www.encodeproject.org/files/ENCFF261FOK/@@download/ENCFF261FOK.bigBed hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF806CWA bigWig fold change over control ENCSR669NFS ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARNT-human ENCAB348OYH DNA False 2018-01-26 ENCODE 3, 4 ENCFF454DSR, ENCFF509BKM 1961337356 ENCODE Processing Pipeline 09f888d6fb730923ebe5f6bfb56276de https://www.encodeproject.org/files/ENCFF806CWA/@@download/ENCFF806CWA.bigWig GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF108FQP bed narrowPeak conservative idr thresholded peaks ENCSR669NFS ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARNT-human ENCAB348OYH DNA False 2018-01-26 ENCODE 3, 4 ENCFF305MLA, ENCFF419RSJ, ENCFF578ZFO, ENCFF805OZG 59990 ENCODE Processing Pipeline a3062a6b34e3388116835b46f8180400 https://www.encodeproject.org/files/ENCFF108FQP/@@download/ENCFF108FQP.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF329LHY bigWig signal p-value ENCSR669NFS ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARNT-human ENCAB348OYH DNA False 2018-01-26 ENCODE 3 ENCFF558XCY, ENCFF581ZJL 1012860070 ENCODE Processing Pipeline 5831197926b2436ba38d6290fdcd5ea7 https://www.encodeproject.org/files/ENCFF329LHY/@@download/ENCFF329LHY.bigWig hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF929OXS bigBed narrowPeak peaks ENCSR669NFS ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARNT-human ENCAB348OYH DNA False 2018-01-26 ENCODE 4 ENCFF286UPH 11193359 ENCODE Processing Pipeline 5f210ce1669e574cf3421277a39fc2f2 https://www.encodeproject.org/files/ENCFF929OXS/@@download/ENCFF929OXS.bigBed hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF215GCR bigBed narrowPeak conservative idr thresholded peaks ENCSR669NFS ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARNT-human ENCAB348OYH DNA False 2018-01-26 ENCODE 3, 4 ENCFF934MUQ 174978 ENCODE Processing Pipeline 25a20abb85ad4dcfee2d6660d60c6626 https://www.encodeproject.org/files/ENCFF215GCR/@@download/ENCFF215GCR.bigBed hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF409IWG bigWig signal p-value ENCSR669NFS ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARNT-human ENCAB348OYH DNA False 2018-01-26 ENCODE 3 ENCFF509BKM 997683239 ENCODE Processing Pipeline a28ce83b69228c268ec60504ba405ccd https://www.encodeproject.org/files/ENCFF409IWG/@@download/ENCFF409IWG.bigWig GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF508DQV bigBed narrowPeak peaks ENCSR669NFS ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARNT-human ENCAB348OYH DNA False 2018-01-26 ENCODE 4 ENCFF805OZG 11211842 ENCODE Processing Pipeline 286f0540df45605ae5d4a955ef021a86 https://www.encodeproject.org/files/ENCFF508DQV/@@download/ENCFF508DQV.bigBed GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF894ZKR bigWig signal p-value ENCSR669NFS ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARNT-human ENCAB348OYH DNA False 2018-01-26 ENCODE 4 ENCFF051LWI, ENCFF675CIQ 893135239 ENCODE Processing Pipeline ffa9918477781d524a07b1760cb4b58f https://www.encodeproject.org/files/ENCFF894ZKR/@@download/ENCFF894ZKR.bigWig hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF934MUQ bed narrowPeak conservative idr thresholded peaks ENCSR669NFS ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARNT-human ENCAB348OYH DNA False 2018-01-26 ENCODE 3, 4 ENCFF001TDO, ENCFF286UPH, ENCFF333QJD, ENCFF968TKP 60829 ENCODE Processing Pipeline 70b9946b9de7321adc3c3f64b70661a5 https://www.encodeproject.org/files/ENCFF934MUQ/@@download/ENCFF934MUQ.bed.gz hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF964GMU bigWig signal p-value ENCSR669NFS ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARNT-human ENCAB348OYH DNA False 2018-01-26 ENCODE 4 ENCFF454DSR 938047016 ENCODE Processing Pipeline e1e194a76e53ab0324d36c8fdede53cd https://www.encodeproject.org/files/ENCFF964GMU/@@download/ENCFF964GMU.bigWig GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF623LLQ bigWig signal p-value ENCSR669NFS ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARNT-human ENCAB348OYH DNA False 2018-01-26 ENCODE 3, 4 ENCFF454DSR, ENCFF509BKM 1869999063 ENCODE Processing Pipeline 43145cb8ee6b1e9208f70f5983cce5b5 https://www.encodeproject.org/files/ENCFF623LLQ/@@download/ENCFF623LLQ.bigWig GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF286UPH bed narrowPeak peaks ENCSR669NFS ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARNT-human ENCAB348OYH DNA False 2018-01-26 ENCODE 4 ENCFF051LWI, ENCFF675CIQ 6143999 ENCODE Processing Pipeline 527dc753875f936b889ff1aad39f7d1c https://www.encodeproject.org/files/ENCFF286UPH/@@download/ENCFF286UPH.bed.gz hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF066XNW bigWig fold change over control ENCSR669NFS ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARNT-human ENCAB348OYH DNA False 2018-01-26 ENCODE 3 ENCFF509BKM 1031123915 ENCODE Processing Pipeline aeb5ef21617569cdcae47e64b9df4c66 https://www.encodeproject.org/files/ENCFF066XNW/@@download/ENCFF066XNW.bigWig GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF386HJD bigBed narrowPeak peaks ENCSR669NFS ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARNT-human ENCAB348OYH DNA False 2018-01-26 ENCODE 3, 4 ENCFF578ZFO 13234425 ENCODE Processing Pipeline 4ebc3ada0cb5718f93d979e6d12872e6 https://www.encodeproject.org/files/ENCFF386HJD/@@download/ENCFF386HJD.bigBed GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF101WNH bigBed narrowPeak optimal idr thresholded peaks ENCSR669NFS ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARNT-human ENCAB348OYH DNA False 2018-01-26 ENCODE 3, 4 ENCFF913AQF 258335 ENCODE Processing Pipeline 050de88934700c57ace4c32f3df05f17 https://www.encodeproject.org/files/ENCFF101WNH/@@download/ENCFF101WNH.bigBed GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF000ZTZ bam alignments ENCSR000DJZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-HDAC8-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 606130324 Kevin White, UChicago 6f243fbd58506bed4cf0185a84f0933e https://www.encodeproject.org/files/ENCFF000ZTZ/@@download/ENCFF000ZTZ.bam hg19 archived low read depth, missing genetic modification characterization, low read length missing derived_from insufficient replicate concordance ENCFF000ZUA bigBed narrowPeak peaks ENCSR000DJZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-HDAC8-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE ENCFF001VRJ 611951 Kevin White, UChicago 687d36d49d1b4bcb1493933f7abaaf4f https://www.encodeproject.org/files/ENCFF000ZUA/@@download/ENCFF000ZUA.bigBed hg19 archived low read depth, missing genetic modification characterization, low read length insufficient replicate concordance ENCFF000ZUC bigWig signal ENCSR000DJZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-HDAC8-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 293130605 Kevin White, UChicago a298f8d34d5191a653429549830151b5 https://www.encodeproject.org/files/ENCFF000ZUC/@@download/ENCFF000ZUC.bigWig hg19 archived low read depth, missing genetic modification characterization, low read length missing derived_from insufficient replicate concordance ENCFF000ZUF bam alignments ENCSR000DJZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-HDAC8-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 878307066 Kevin White, UChicago 9eaeb7e0814f2e5a405a6df055824568 https://www.encodeproject.org/files/ENCFF000ZUF/@@download/ENCFF000ZUF.bam hg19 archived low read depth, missing genetic modification characterization, low read length missing derived_from insufficient replicate concordance ENCFF000ZUL fastq reads ENCSR000DJZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-HDAC8-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 1 1 36 single-ended 772077224 Kevin White, UChicago a422ee47472046be2183e17d4c7b9fee https://www.encodeproject.org/files/ENCFF000ZUL/@@download/ENCFF000ZUL.fastq.gz Illumina Genome Analyzer II /files/ENCFF000ZVJ/ released low read depth, missing genetic modification characterization, low read length insufficient replicate concordance ENCFF000ZUS fastq reads ENCSR000DJZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-HDAC8-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 2 1 36 single-ended 1097844622 Kevin White, UChicago 7ee1eaab3923f127a43296906a2447d8 https://www.encodeproject.org/files/ENCFF000ZUS/@@download/ENCFF000ZUS.fastq.gz Illumina Genome Analyzer II /files/ENCFF000ZVV/ released low read depth, missing genetic modification characterization, low read length insufficient replicate concordance ENCFF001VRJ bed narrowPeak peaks ENCSR000DJZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-HDAC8-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 265852 Kevin White, UChicago 5f54a00f490be9bd92213e0295408d81 https://www.encodeproject.org/files/ENCFF001VRJ/@@download/ENCFF001VRJ.bed.gz hg19 archived low read depth, missing genetic modification characterization, low read length missing derived_from insufficient replicate concordance ENCFF002DDX bed narrowPeak optimal idr thresholded peaks ENCSR000DJZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-HDAC8-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 33793 ENCODE Consortium Analysis Working Group d1487abda2136e261aadb10bdf04addd https://www.encodeproject.org/files/ENCFF002DDX/@@download/ENCFF002DDX.bed.gz hg19 archived low read depth, missing genetic modification characterization, low read length missing derived_from insufficient replicate concordance ENCFF409ULZ bigBed narrowPeak optimal idr thresholded peaks ENCSR000DJZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-HDAC8-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE ENCFF002DDX 118162 ENCODE Consortium e47890cd76a460780e3cfdc0724bd68f https://www.encodeproject.org/files/ENCFF409ULZ/@@download/ENCFF409ULZ.bigBed hg19 archived low read depth, missing genetic modification characterization, low read length insufficient replicate concordance ENCFF786TLS bam alignments ENCSR000DJZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-HDAC8-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 1 36 ENCFF000ZUL, ENCFF643CGH 668797753 ENCODE Processing Pipeline 59e9590f44893904b749834668d47077 https://www.encodeproject.org/files/ENCFF786TLS/@@download/ENCFF786TLS.bam GRCh38 released low read depth, missing genetic modification characterization, low read length insufficient replicate concordance ENCFF158DVM bam unfiltered alignments ENCSR000DJZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-HDAC8-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 2 36 ENCFF000ZUS, ENCFF643CGH 1349093690 ENCODE Processing Pipeline d55f062ebd7eae79f4d18bb337074ddf https://www.encodeproject.org/files/ENCFF158DVM/@@download/ENCFF158DVM.bam GRCh38 released low read depth, missing genetic modification characterization, low read length insufficient replicate concordance ENCFF063FBY bam unfiltered alignments ENCSR000DJZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-HDAC8-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 1 36 ENCFF000ZUL, ENCFF643CGH 948938296 ENCODE Processing Pipeline 65a7d272eb30f14732eb0e4b5fac58ba https://www.encodeproject.org/files/ENCFF063FBY/@@download/ENCFF063FBY.bam GRCh38 released low read depth, missing genetic modification characterization, low read length insufficient replicate concordance ENCFF771CUF bam unfiltered alignments ENCSR000DJZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-HDAC8-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 2 36 ENCFF000ZUS, ENCFF807MUK 1341708766 ENCODE Processing Pipeline 7e195475134230d4ee1aea89544a43ce https://www.encodeproject.org/files/ENCFF771CUF/@@download/ENCFF771CUF.bam hg19 released low read depth, missing genetic modification characterization, low read length insufficient replicate concordance ENCFF659KOL bam alignments ENCSR000DJZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-HDAC8-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 2 36 ENCFF000ZUS, ENCFF643CGH 889464201 ENCODE Processing Pipeline 4e847c49f7ee33eab8f5518ca61b5935 https://www.encodeproject.org/files/ENCFF659KOL/@@download/ENCFF659KOL.bam GRCh38 released low read depth, missing genetic modification characterization, low read length insufficient replicate concordance ENCFF788FFM bam alignments ENCSR000DJZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-HDAC8-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 2 36 ENCFF000ZUS, ENCFF807MUK 889972035 ENCODE Processing Pipeline 4b1afb41f7633c8f3e5d0d01d25e4e4b https://www.encodeproject.org/files/ENCFF788FFM/@@download/ENCFF788FFM.bam hg19 released low read depth, missing genetic modification characterization, low read length insufficient replicate concordance ENCFF460CUT bam unfiltered alignments ENCSR000DJZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-HDAC8-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 1 36 ENCFF000ZUL, ENCFF807MUK 945499531 ENCODE Processing Pipeline fee98b02ab38c3cad691f5ab456c3fb6 https://www.encodeproject.org/files/ENCFF460CUT/@@download/ENCFF460CUT.bam hg19 released low read depth, missing genetic modification characterization, low read length insufficient replicate concordance ENCFF721IXJ bam alignments ENCSR000DJZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-HDAC8-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 1 36 ENCFF000ZUL, ENCFF807MUK 669142178 ENCODE Processing Pipeline fa0184847e3a6b044d518a2d9c626f92 https://www.encodeproject.org/files/ENCFF721IXJ/@@download/ENCFF721IXJ.bam hg19 released low read depth, missing genetic modification characterization, low read length insufficient replicate concordance ENCFF660TQQ bigWig signal p-value ENCSR000DJZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-HDAC8-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 1 ENCFF138FPL, ENCFF647LGE, ENCFF721IXJ 592547714 ENCODE Processing Pipeline b428fdca87b96c6051d4e3d9dc20be78 https://www.encodeproject.org/files/ENCFF660TQQ/@@download/ENCFF660TQQ.bigWig hg19 released low read depth, missing genetic modification characterization, low read length insufficient replicate concordance ENCFF904IIG bigWig signal p-value ENCSR000DJZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-HDAC8-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 2 ENCFF138FPL, ENCFF647LGE, ENCFF788FFM 622395664 ENCODE Processing Pipeline c764d3db9f37feffb3306522317ed353 https://www.encodeproject.org/files/ENCFF904IIG/@@download/ENCFF904IIG.bigWig hg19 released low read depth, missing genetic modification characterization, low read length insufficient replicate concordance ENCFF502EMU bigWig signal p-value ENCSR000DJZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-HDAC8-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 2 ENCFF240RBJ, ENCFF659KOL, ENCFF683DQU 730167340 ENCODE Processing Pipeline 01cbee40c3c85a8fdf6726c7cf060554 https://www.encodeproject.org/files/ENCFF502EMU/@@download/ENCFF502EMU.bigWig GRCh38 released low read depth, missing genetic modification characterization, low read length insufficient replicate concordance ENCFF009RUR bigWig signal p-value ENCSR000DJZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-HDAC8-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 1 ENCFF240RBJ, ENCFF683DQU, ENCFF786TLS 614304860 ENCODE Processing Pipeline e486f4e34cb1526ecac3475fe0bedeb3 https://www.encodeproject.org/files/ENCFF009RUR/@@download/ENCFF009RUR.bigWig GRCh38 released low read depth, missing genetic modification characterization, low read length insufficient replicate concordance ENCFF608TUH bigWig signal p-value ENCSR000DJZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-HDAC8-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 1, 2 ENCFF240RBJ, ENCFF659KOL, ENCFF683DQU, ENCFF786TLS 761042119 ENCODE Processing Pipeline 65c72daa3533344930f1a442ecf12df8 https://www.encodeproject.org/files/ENCFF608TUH/@@download/ENCFF608TUH.bigWig GRCh38 released low read depth, missing genetic modification characterization, low read length insufficient replicate concordance ENCFF018DCF bigWig fold change over control ENCSR000DJZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-HDAC8-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 1, 2 ENCFF138FPL, ENCFF647LGE, ENCFF721IXJ, ENCFF788FFM 793271526 ENCODE Processing Pipeline 6c28a6264b9b604fd5b8e3480e05737d https://www.encodeproject.org/files/ENCFF018DCF/@@download/ENCFF018DCF.bigWig hg19 released low read depth, missing genetic modification characterization, low read length insufficient replicate concordance ENCFF724VJT bigWig fold change over control ENCSR000DJZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-HDAC8-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 2 ENCFF240RBJ, ENCFF659KOL, ENCFF683DQU 534811901 ENCODE Processing Pipeline c0260d2a8b18e4fe1ded3885934b26cd https://www.encodeproject.org/files/ENCFF724VJT/@@download/ENCFF724VJT.bigWig GRCh38 released low read depth, missing genetic modification characterization, low read length insufficient replicate concordance ENCFF186TOZ bigWig signal p-value ENCSR000DJZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-HDAC8-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 1, 2 ENCFF138FPL, ENCFF647LGE, ENCFF721IXJ, ENCFF788FFM 781109199 ENCODE Processing Pipeline ac0460f89064b099c98ff9f3deaf622f https://www.encodeproject.org/files/ENCFF186TOZ/@@download/ENCFF186TOZ.bigWig hg19 released low read depth, missing genetic modification characterization, low read length insufficient replicate concordance ENCFF503WHG bigWig fold change over control ENCSR000DJZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-HDAC8-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 2 ENCFF138FPL, ENCFF647LGE, ENCFF788FFM 538062843 ENCODE Processing Pipeline 9dfe7fe2c165b2933fa1b6fa0b0fbe51 https://www.encodeproject.org/files/ENCFF503WHG/@@download/ENCFF503WHG.bigWig hg19 released low read depth, missing genetic modification characterization, low read length insufficient replicate concordance ENCFF835SWC bed narrowPeak peaks ENCSR000DJZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-HDAC8-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 1 ENCFF138FPL, ENCFF647LGE, ENCFF721IXJ 6392683 ENCODE Processing Pipeline 948b5e041781adbef373741551e875b4 https://www.encodeproject.org/files/ENCFF835SWC/@@download/ENCFF835SWC.bed.gz hg19 released low read depth, missing genetic modification characterization, low read length insufficient replicate concordance ENCFF179FTS bigWig fold change over control ENCSR000DJZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-HDAC8-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 1 ENCFF240RBJ, ENCFF683DQU, ENCFF786TLS 534734672 ENCODE Processing Pipeline b9a9754329ee8b9ffde1d825f8870fc7 https://www.encodeproject.org/files/ENCFF179FTS/@@download/ENCFF179FTS.bigWig GRCh38 released low read depth, missing genetic modification characterization, low read length insufficient replicate concordance ENCFF123UJJ bigWig fold change over control ENCSR000DJZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-HDAC8-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 1 ENCFF138FPL, ENCFF647LGE, ENCFF721IXJ 526838440 ENCODE Processing Pipeline 831c7170eb517f50700af1f8348365e3 https://www.encodeproject.org/files/ENCFF123UJJ/@@download/ENCFF123UJJ.bigWig hg19 released low read depth, missing genetic modification characterization, low read length insufficient replicate concordance ENCFF851ZNS bigBed narrowPeak peaks ENCSR000DJZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-HDAC8-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 1 ENCFF835SWC 12888918 ENCODE Processing Pipeline 6d733844cdbf1fd4d065d08ef3efaa58 https://www.encodeproject.org/files/ENCFF851ZNS/@@download/ENCFF851ZNS.bigBed hg19 released low read depth, missing genetic modification characterization, low read length insufficient replicate concordance ENCFF115ZOD bigWig fold change over control ENCSR000DJZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-HDAC8-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 1, 2 ENCFF240RBJ, ENCFF659KOL, ENCFF683DQU, ENCFF786TLS 790659133 ENCODE Processing Pipeline 1919d99185fb677bc4be7d23c929542e https://www.encodeproject.org/files/ENCFF115ZOD/@@download/ENCFF115ZOD.bigWig GRCh38 released low read depth, missing genetic modification characterization, low read length insufficient replicate concordance ENCFF547GIJ bed narrowPeak peaks ENCSR000DJZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-HDAC8-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 1, 2 ENCFF138FPL, ENCFF647LGE, ENCFF721IXJ, ENCFF788FFM 6842772 ENCODE Processing Pipeline 5c86883bebbe6179bba9231e24255344 https://www.encodeproject.org/files/ENCFF547GIJ/@@download/ENCFF547GIJ.bed.gz hg19 released low read depth, missing genetic modification characterization, low read length insufficient replicate concordance ENCFF413KAR bigBed narrowPeak peaks ENCSR000DJZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-HDAC8-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 2 ENCFF011ZRR 11001390 ENCODE Processing Pipeline 6b769d9d33f02253bd9f376e00354521 https://www.encodeproject.org/files/ENCFF413KAR/@@download/ENCFF413KAR.bigBed hg19 released low read depth, missing genetic modification characterization, low read length insufficient replicate concordance ENCFF621HTW bed narrowPeak conservative idr thresholded peaks ENCSR000DJZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-HDAC8-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 1, 2 ENCFF001TDO, ENCFF011ZRR, ENCFF547GIJ, ENCFF835SWC 21221 ENCODE Processing Pipeline 51ef0f0a5a46ed44d6ff2a5e81830b7b https://www.encodeproject.org/files/ENCFF621HTW/@@download/ENCFF621HTW.bed.gz hg19 released low read depth, missing genetic modification characterization, low read length insufficient replicate concordance ENCFF176GTK bed narrowPeak peaks ENCSR000DJZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-HDAC8-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 1 ENCFF240RBJ, ENCFF683DQU, ENCFF786TLS 6372481 ENCODE Processing Pipeline 861980e081373c051615c12d91821be1 https://www.encodeproject.org/files/ENCFF176GTK/@@download/ENCFF176GTK.bed.gz GRCh38 released low read depth, missing genetic modification characterization, low read length insufficient replicate concordance ENCFF833KXP bed narrowPeak optimal idr thresholded peaks ENCSR000DJZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-HDAC8-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 1, 2 ENCFF001TDO, ENCFF011ZRR, ENCFF547GIJ, ENCFF835SWC 43873 ENCODE Processing Pipeline 215555097926bb12b0154429fa63d0fe https://www.encodeproject.org/files/ENCFF833KXP/@@download/ENCFF833KXP.bed.gz hg19 released low read depth, missing genetic modification characterization, low read length insufficient replicate concordance ENCFF858RIU bigBed narrowPeak optimal idr thresholded peaks ENCSR000DJZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-HDAC8-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 1, 2 ENCFF833KXP 153003 ENCODE Processing Pipeline 3916d8d2236fb622d34bce791a5d1a4b https://www.encodeproject.org/files/ENCFF858RIU/@@download/ENCFF858RIU.bigBed hg19 released low read depth, missing genetic modification characterization, low read length insufficient replicate concordance ENCFF011ZRR bed narrowPeak peaks ENCSR000DJZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-HDAC8-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 2 ENCFF138FPL, ENCFF647LGE, ENCFF788FFM 4681633 ENCODE Processing Pipeline a4f8c8552ac239cf18baaac502d0326c https://www.encodeproject.org/files/ENCFF011ZRR/@@download/ENCFF011ZRR.bed.gz hg19 released low read depth, missing genetic modification characterization, low read length insufficient replicate concordance ENCFF477SUP bigBed narrowPeak conservative idr thresholded peaks ENCSR000DJZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-HDAC8-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 1, 2 ENCFF621HTW 123138 ENCODE Processing Pipeline 7941ecacf6cd14c9d43e5c9a6df9c741 https://www.encodeproject.org/files/ENCFF477SUP/@@download/ENCFF477SUP.bigBed hg19 released low read depth, missing genetic modification characterization, low read length insufficient replicate concordance ENCFF646KEC bigBed narrowPeak peaks ENCSR000DJZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-HDAC8-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 1, 2 ENCFF547GIJ 13047874 ENCODE Processing Pipeline b1ddc30629cf7575b8942a2a180f651c https://www.encodeproject.org/files/ENCFF646KEC/@@download/ENCFF646KEC.bigBed hg19 released low read depth, missing genetic modification characterization, low read length insufficient replicate concordance ENCFF595XOF bed narrowPeak peaks ENCSR000DJZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-HDAC8-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 2 ENCFF240RBJ, ENCFF659KOL, ENCFF683DQU 4837884 ENCODE Processing Pipeline 7bc553fc169b919941ea629d8f826df6 https://www.encodeproject.org/files/ENCFF595XOF/@@download/ENCFF595XOF.bed.gz GRCh38 released low read depth, missing genetic modification characterization, low read length insufficient replicate concordance ENCFF887IVP bed narrowPeak peaks ENCSR000DJZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-HDAC8-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 1, 2 ENCFF240RBJ, ENCFF659KOL, ENCFF683DQU, ENCFF786TLS 6826226 ENCODE Processing Pipeline 135c2ec57ad4f6e5f65f8ae25175bc32 https://www.encodeproject.org/files/ENCFF887IVP/@@download/ENCFF887IVP.bed.gz GRCh38 released low read depth, missing genetic modification characterization, low read length insufficient replicate concordance ENCFF316ULS bigBed narrowPeak peaks ENCSR000DJZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-HDAC8-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 1, 2 ENCFF887IVP 13076649 ENCODE Processing Pipeline 107ec23ab0cfdfaec02d4ff27e933d43 https://www.encodeproject.org/files/ENCFF316ULS/@@download/ENCFF316ULS.bigBed GRCh38 released low read depth, missing genetic modification characterization, low read length insufficient replicate concordance ENCFF046GWF bigBed narrowPeak peaks ENCSR000DJZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-HDAC8-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 1 ENCFF176GTK 12900286 ENCODE Processing Pipeline 9241ef9b4503da065eed11c1819ce367 https://www.encodeproject.org/files/ENCFF046GWF/@@download/ENCFF046GWF.bigBed GRCh38 released low read depth, missing genetic modification characterization, low read length insufficient replicate concordance ENCFF562ADO bigBed narrowPeak optimal idr thresholded peaks ENCSR000DJZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-HDAC8-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 1, 2 ENCFF237RPL 151247 ENCODE Processing Pipeline e6a83f9125df3cef3223013357715e5b https://www.encodeproject.org/files/ENCFF562ADO/@@download/ENCFF562ADO.bigBed GRCh38 released low read depth, missing genetic modification characterization, low read length insufficient replicate concordance ENCFF605HUE bigBed narrowPeak peaks ENCSR000DJZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-HDAC8-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 2 ENCFF595XOF 11105740 ENCODE Processing Pipeline 6f9ea19b22efb840ddfb50ccf17ca5a1 https://www.encodeproject.org/files/ENCFF605HUE/@@download/ENCFF605HUE.bigBed GRCh38 released low read depth, missing genetic modification characterization, low read length insufficient replicate concordance ENCFF237RPL bed narrowPeak optimal idr thresholded peaks ENCSR000DJZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-HDAC8-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 1, 2 ENCFF176GTK, ENCFF419RSJ, ENCFF595XOF, ENCFF887IVP 42093 ENCODE Processing Pipeline 58b0a8c7747dd8173a3b0aa870073ea6 https://www.encodeproject.org/files/ENCFF237RPL/@@download/ENCFF237RPL.bed.gz GRCh38 released low read depth, missing genetic modification characterization, low read length insufficient replicate concordance ENCFF631RMQ bed narrowPeak conservative idr thresholded peaks ENCSR000DJZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-HDAC8-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 1, 2 ENCFF176GTK, ENCFF419RSJ, ENCFF595XOF, ENCFF887IVP 18980 ENCODE Processing Pipeline e4987686f399d91c918e1ec133168a0b https://www.encodeproject.org/files/ENCFF631RMQ/@@download/ENCFF631RMQ.bed.gz GRCh38 released low read depth, missing genetic modification characterization, low read length insufficient replicate concordance ENCFF079LAZ bigBed narrowPeak conservative idr thresholded peaks ENCSR000DJZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-HDAC8-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 1, 2 ENCFF631RMQ 118919 ENCODE Processing Pipeline 6f911eb45ec3ddf37668d59ec24ce5d9 https://www.encodeproject.org/files/ENCFF079LAZ/@@download/ENCFF079LAZ.bigBed GRCh38 released low read depth, missing genetic modification characterization, low read length insufficient replicate concordance ENCFF732PVD fastq reads ENCSR574XEO ChIP-seq EFO:0002067 K562 cell line Homo sapiens NUFIP1-human ENCAB558VPN DNA False 2018-01-31 ENCODE 2 1 100 paired-ended 1 ENCFF098JPF 3076482005 Michael Snyder, Stanford f79bcc352b32a7f37e773c1b2ad36d31 https://www.encodeproject.org/files/ENCFF732PVD/@@download/ENCFF732PVD.fastq.gz Illumina HiSeq 2000 /files/ENCFF240DTE/ released experiment not submitted to GEO partially characterized antibody ENCFF098JPF fastq reads ENCSR574XEO ChIP-seq EFO:0002067 K562 cell line Homo sapiens NUFIP1-human ENCAB558VPN DNA False 2018-01-31 ENCODE 2 1 100 paired-ended 2 ENCFF732PVD 3119051513 Michael Snyder, Stanford 68bb19ab8209269824a6327c452db8af https://www.encodeproject.org/files/ENCFF098JPF/@@download/ENCFF098JPF.fastq.gz Illumina HiSeq 2000 /files/ENCFF608MDV/ released experiment not submitted to GEO partially characterized antibody ENCFF025YQV fastq reads ENCSR574XEO ChIP-seq EFO:0002067 K562 cell line Homo sapiens NUFIP1-human ENCAB558VPN DNA False 2018-01-31 ENCODE 1 1 100 paired-ended 1 ENCFF572GPA 2729049456 Michael Snyder, Stanford 14e3a270835c8e7d7c29e1fa621d54a4 https://www.encodeproject.org/files/ENCFF025YQV/@@download/ENCFF025YQV.fastq.gz Illumina HiSeq 2000 /files/ENCFF410PHD/ released experiment not submitted to GEO partially characterized antibody ENCFF572GPA fastq reads ENCSR574XEO ChIP-seq EFO:0002067 K562 cell line Homo sapiens NUFIP1-human ENCAB558VPN DNA False 2018-01-31 ENCODE 1 1 100 paired-ended 2 ENCFF025YQV 2767115615 Michael Snyder, Stanford 1a909ffac95f225d26058ff8404e651e https://www.encodeproject.org/files/ENCFF572GPA/@@download/ENCFF572GPA.fastq.gz Illumina HiSeq 2000 /files/ENCFF368UOC/ released experiment not submitted to GEO partially characterized antibody ENCFF400HJN bam unfiltered alignments ENCSR574XEO ChIP-seq EFO:0002067 K562 cell line Homo sapiens NUFIP1-human ENCAB558VPN DNA False 2018-01-31 ENCODE 1 100 ENCFF025YQV, ENCFF572GPA, ENCFF643CGH 6032671160 ENCODE Processing Pipeline f3e763923eebc486f5c81997e2fdc71d https://www.encodeproject.org/files/ENCFF400HJN/@@download/ENCFF400HJN.bam GRCh38 released experiment not submitted to GEO partially characterized antibody ENCFF666KMW bam unfiltered alignments ENCSR574XEO ChIP-seq EFO:0002067 K562 cell line Homo sapiens NUFIP1-human ENCAB558VPN DNA False 2018-01-31 ENCODE 2 100 ENCFF098JPF, ENCFF643CGH, ENCFF732PVD 6752818288 ENCODE Processing Pipeline 1a74485f7a037348dcc41a903bb605e2 https://www.encodeproject.org/files/ENCFF666KMW/@@download/ENCFF666KMW.bam GRCh38 released experiment not submitted to GEO partially characterized antibody ENCFF315RBN bam unfiltered alignments ENCSR574XEO ChIP-seq EFO:0002067 K562 cell line Homo sapiens NUFIP1-human ENCAB558VPN DNA False 2018-01-31 ENCODE 2 100 ENCFF098JPF, ENCFF732PVD, ENCFF807MUK 6746549374 ENCODE Processing Pipeline 43cecc668f1b2ae6397cdb53cc5f161f https://www.encodeproject.org/files/ENCFF315RBN/@@download/ENCFF315RBN.bam hg19 released experiment not submitted to GEO partially characterized antibody ENCFF252FSL bam unfiltered alignments ENCSR574XEO ChIP-seq EFO:0002067 K562 cell line Homo sapiens NUFIP1-human ENCAB558VPN DNA False 2018-01-31 ENCODE 1 100 ENCFF025YQV, ENCFF572GPA, ENCFF807MUK 6027277559 ENCODE Processing Pipeline 725d14587d926333a9fbe7d832c765b7 https://www.encodeproject.org/files/ENCFF252FSL/@@download/ENCFF252FSL.bam hg19 released experiment not submitted to GEO partially characterized antibody ENCFF102RWP bam alignments ENCSR574XEO ChIP-seq EFO:0002067 K562 cell line Homo sapiens NUFIP1-human ENCAB558VPN DNA False 2018-01-31 ENCODE 1 100 ENCFF025YQV, ENCFF572GPA, ENCFF807MUK 4450232867 ENCODE Processing Pipeline b3fdf126b153ac65a4488b4af6d015cb https://www.encodeproject.org/files/ENCFF102RWP/@@download/ENCFF102RWP.bam hg19 released experiment not submitted to GEO partially characterized antibody ENCFF379VLE bam alignments ENCSR574XEO ChIP-seq EFO:0002067 K562 cell line Homo sapiens NUFIP1-human ENCAB558VPN DNA False 2018-01-31 ENCODE 1 100 ENCFF025YQV, ENCFF572GPA, ENCFF643CGH 4452991753 ENCODE Processing Pipeline 0d1b10702f592f130e1b64e0ca50f67c https://www.encodeproject.org/files/ENCFF379VLE/@@download/ENCFF379VLE.bam GRCh38 released experiment not submitted to GEO partially characterized antibody ENCFF758OOR bam alignments ENCSR574XEO ChIP-seq EFO:0002067 K562 cell line Homo sapiens NUFIP1-human ENCAB558VPN DNA False 2018-01-31 ENCODE 2 100 ENCFF098JPF, ENCFF732PVD, ENCFF807MUK 5041061584 ENCODE Processing Pipeline a075fad4e871ff4f4666a0747c180dc4 https://www.encodeproject.org/files/ENCFF758OOR/@@download/ENCFF758OOR.bam hg19 released experiment not submitted to GEO partially characterized antibody ENCFF702BVO bam alignments ENCSR574XEO ChIP-seq EFO:0002067 K562 cell line Homo sapiens NUFIP1-human ENCAB558VPN DNA False 2018-01-31 ENCODE 2 100 ENCFF098JPF, ENCFF643CGH, ENCFF732PVD 5044485832 ENCODE Processing Pipeline a14292cd3ffdfeef1078598942dd65a2 https://www.encodeproject.org/files/ENCFF702BVO/@@download/ENCFF702BVO.bam GRCh38 released experiment not submitted to GEO partially characterized antibody ENCFF645UPN bigWig fold change over control ENCSR574XEO ChIP-seq EFO:0002067 K562 cell line Homo sapiens NUFIP1-human ENCAB558VPN DNA False 2018-01-31 ENCODE 1, 2 ENCFF102RWP, ENCFF262CJE, ENCFF506DFV, ENCFF758OOR 1881674002 ENCODE Processing Pipeline 5f0b35c42de70a87989423be79645740 https://www.encodeproject.org/files/ENCFF645UPN/@@download/ENCFF645UPN.bigWig hg19 released experiment not submitted to GEO partially characterized antibody ENCFF517GZV bed narrowPeak conservative idr thresholded peaks ENCSR574XEO ChIP-seq EFO:0002067 K562 cell line Homo sapiens NUFIP1-human ENCAB558VPN DNA False 2018-01-31 ENCODE 1, 2 ENCFF001TDO, ENCFF349MUN, ENCFF466JSP, ENCFF629MDH 44086 ENCODE Processing Pipeline 586c7f0722ff930195e18055d12a6b13 https://www.encodeproject.org/files/ENCFF517GZV/@@download/ENCFF517GZV.bed.gz hg19 released experiment not submitted to GEO partially characterized antibody ENCFF569VAK bigWig signal p-value ENCSR574XEO ChIP-seq EFO:0002067 K562 cell line Homo sapiens NUFIP1-human ENCAB558VPN DNA False 2018-01-31 ENCODE 1 ENCFF102RWP, ENCFF262CJE, ENCFF506DFV 1241825382 ENCODE Processing Pipeline dd548056acc6dcbcc658540c7c11c536 https://www.encodeproject.org/files/ENCFF569VAK/@@download/ENCFF569VAK.bigWig hg19 released experiment not submitted to GEO partially characterized antibody ENCFF109UDY bigWig fold change over control ENCSR574XEO ChIP-seq EFO:0002067 K562 cell line Homo sapiens NUFIP1-human ENCAB558VPN DNA False 2018-01-31 ENCODE 1 ENCFF102RWP, ENCFF262CJE, ENCFF506DFV 1297252135 ENCODE Processing Pipeline 9843214880d80a584fe2c7b17b42c067 https://www.encodeproject.org/files/ENCFF109UDY/@@download/ENCFF109UDY.bigWig hg19 released experiment not submitted to GEO partially characterized antibody ENCFF589AQZ bigWig signal p-value ENCSR574XEO ChIP-seq EFO:0002067 K562 cell line Homo sapiens NUFIP1-human ENCAB558VPN DNA False 2018-01-31 ENCODE 2 ENCFF262CJE, ENCFF506DFV, ENCFF758OOR 1176087961 ENCODE Processing Pipeline 2aa0bfcb6825b83a744ae3e2eb19e5f9 https://www.encodeproject.org/files/ENCFF589AQZ/@@download/ENCFF589AQZ.bigWig hg19 released experiment not submitted to GEO partially characterized antibody ENCFF629MDH bed narrowPeak peaks ENCSR574XEO ChIP-seq EFO:0002067 K562 cell line Homo sapiens NUFIP1-human ENCAB558VPN DNA False 2018-01-31 ENCODE 2 ENCFF262CJE, ENCFF506DFV, ENCFF758OOR 6426362 ENCODE Processing Pipeline cfa47a78182eda62eb4386595cf76634 https://www.encodeproject.org/files/ENCFF629MDH/@@download/ENCFF629MDH.bed.gz hg19 released experiment not submitted to GEO partially characterized antibody ENCFF798LSA bigBed narrowPeak peaks ENCSR574XEO ChIP-seq EFO:0002067 K562 cell line Homo sapiens NUFIP1-human ENCAB558VPN DNA False 2018-01-31 ENCODE 1, 2 ENCFF349MUN 11142522 ENCODE Processing Pipeline bc59c705fe1e64cdda8a48439dbbcf23 https://www.encodeproject.org/files/ENCFF798LSA/@@download/ENCFF798LSA.bigBed hg19 released experiment not submitted to GEO partially characterized antibody ENCFF349MUN bed narrowPeak peaks ENCSR574XEO ChIP-seq EFO:0002067 K562 cell line Homo sapiens NUFIP1-human ENCAB558VPN DNA False 2018-01-31 ENCODE 1, 2 ENCFF102RWP, ENCFF262CJE, ENCFF506DFV, ENCFF758OOR 7144928 ENCODE Processing Pipeline a321c4dd077ae6c5eae5228f41e848b9 https://www.encodeproject.org/files/ENCFF349MUN/@@download/ENCFF349MUN.bed.gz hg19 released experiment not submitted to GEO partially characterized antibody ENCFF612JIY bigBed narrowPeak peaks ENCSR574XEO ChIP-seq EFO:0002067 K562 cell line Homo sapiens NUFIP1-human ENCAB558VPN DNA False 2018-01-31 ENCODE 2 ENCFF629MDH 11237512 ENCODE Processing Pipeline 179b7a0878e123f5f08a25dcec8d81f8 https://www.encodeproject.org/files/ENCFF612JIY/@@download/ENCFF612JIY.bigBed hg19 released experiment not submitted to GEO partially characterized antibody ENCFF462ZTE bigBed narrowPeak conservative idr thresholded peaks ENCSR574XEO ChIP-seq EFO:0002067 K562 cell line Homo sapiens NUFIP1-human ENCAB558VPN DNA False 2018-01-31 ENCODE 1, 2 ENCFF517GZV 144845 ENCODE Processing Pipeline 94e213f2cc391d8a2351079316d19658 https://www.encodeproject.org/files/ENCFF462ZTE/@@download/ENCFF462ZTE.bigBed hg19 released experiment not submitted to GEO partially characterized antibody ENCFF148EJR bigWig fold change over control ENCSR574XEO ChIP-seq EFO:0002067 K562 cell line Homo sapiens NUFIP1-human ENCAB558VPN DNA False 2018-01-31 ENCODE 2 ENCFF262CJE, ENCFF506DFV, ENCFF758OOR 1384470609 ENCODE Processing Pipeline 0f5743a1e2514d9d5c634a4663d96e51 https://www.encodeproject.org/files/ENCFF148EJR/@@download/ENCFF148EJR.bigWig hg19 released experiment not submitted to GEO partially characterized antibody ENCFF693TNF bigBed narrowPeak peaks ENCSR574XEO ChIP-seq EFO:0002067 K562 cell line Homo sapiens NUFIP1-human ENCAB558VPN DNA False 2018-01-31 ENCODE 1 ENCFF466JSP 11245012 ENCODE Processing Pipeline 875edad0c5683f6410b0cb9230d5cb3a https://www.encodeproject.org/files/ENCFF693TNF/@@download/ENCFF693TNF.bigBed hg19 released experiment not submitted to GEO partially characterized antibody ENCFF331TEL bigWig signal p-value ENCSR574XEO ChIP-seq EFO:0002067 K562 cell line Homo sapiens NUFIP1-human ENCAB558VPN DNA False 2018-01-31 ENCODE 1, 2 ENCFF102RWP, ENCFF262CJE, ENCFF506DFV, ENCFF758OOR 1369448149 ENCODE Processing Pipeline a32a46e2a517f406fd7d5810396dad01 https://www.encodeproject.org/files/ENCFF331TEL/@@download/ENCFF331TEL.bigWig hg19 released experiment not submitted to GEO partially characterized antibody ENCFF466JSP bed narrowPeak peaks ENCSR574XEO ChIP-seq EFO:0002067 K562 cell line Homo sapiens NUFIP1-human ENCAB558VPN DNA False 2018-01-31 ENCODE 1 ENCFF102RWP, ENCFF262CJE, ENCFF506DFV 6434268 ENCODE Processing Pipeline 23f55f2073dafeb259497b0593e8c0ec https://www.encodeproject.org/files/ENCFF466JSP/@@download/ENCFF466JSP.bed.gz hg19 released experiment not submitted to GEO partially characterized antibody ENCFF289BUU bed narrowPeak optimal idr thresholded peaks ENCSR574XEO ChIP-seq EFO:0002067 K562 cell line Homo sapiens NUFIP1-human ENCAB558VPN DNA False 2018-01-31 ENCODE 1, 2 ENCFF001TDO, ENCFF349MUN, ENCFF466JSP, ENCFF629MDH 69389 ENCODE Processing Pipeline 3cac01fc9589a4464ae550b9ca599261 https://www.encodeproject.org/files/ENCFF289BUU/@@download/ENCFF289BUU.bed.gz hg19 released experiment not submitted to GEO partially characterized antibody ENCFF261PLN bigBed narrowPeak optimal idr thresholded peaks ENCSR574XEO ChIP-seq EFO:0002067 K562 cell line Homo sapiens NUFIP1-human ENCAB558VPN DNA False 2018-01-31 ENCODE 1, 2 ENCFF289BUU 186974 ENCODE Processing Pipeline 22d15f26c16bce6bb5dfd5c313bc3cba https://www.encodeproject.org/files/ENCFF261PLN/@@download/ENCFF261PLN.bigBed hg19 released experiment not submitted to GEO partially characterized antibody ENCFF953IKY bigWig fold change over control ENCSR574XEO ChIP-seq EFO:0002067 K562 cell line Homo sapiens NUFIP1-human ENCAB558VPN DNA False 2018-01-31 ENCODE 1 ENCFF379VLE, ENCFF720AUK, ENCFF796JTX 1289790911 ENCODE Processing Pipeline bfb2aa16925e3591d6a768b441be7f78 https://www.encodeproject.org/files/ENCFF953IKY/@@download/ENCFF953IKY.bigWig GRCh38 released experiment not submitted to GEO partially characterized antibody ENCFF949FTC bigWig fold change over control ENCSR574XEO ChIP-seq EFO:0002067 K562 cell line Homo sapiens NUFIP1-human ENCAB558VPN DNA False 2018-01-31 ENCODE 1, 2 ENCFF379VLE, ENCFF702BVO, ENCFF720AUK, ENCFF796JTX 1884751585 ENCODE Processing Pipeline 8c156eb8a5d614cdf9ee937139910963 https://www.encodeproject.org/files/ENCFF949FTC/@@download/ENCFF949FTC.bigWig GRCh38 released experiment not submitted to GEO partially characterized antibody ENCFF927FWG bigWig signal p-value ENCSR574XEO ChIP-seq EFO:0002067 K562 cell line Homo sapiens NUFIP1-human ENCAB558VPN DNA False 2018-01-31 ENCODE 1, 2 ENCFF379VLE, ENCFF702BVO, ENCFF720AUK, ENCFF796JTX 1637929510 ENCODE Processing Pipeline 886b10a38c0eda8db81ed2eb01c2dd6a https://www.encodeproject.org/files/ENCFF927FWG/@@download/ENCFF927FWG.bigWig GRCh38 released experiment not submitted to GEO partially characterized antibody ENCFF534PWX bigBed narrowPeak peaks ENCSR574XEO ChIP-seq EFO:0002067 K562 cell line Homo sapiens NUFIP1-human ENCAB558VPN DNA False 2018-01-31 ENCODE 2 ENCFF790CZA 11258417 ENCODE Processing Pipeline 610373d303afb4d61102170c40444305 https://www.encodeproject.org/files/ENCFF534PWX/@@download/ENCFF534PWX.bigBed GRCh38 released experiment not submitted to GEO partially characterized antibody ENCFF909TDT bed narrowPeak conservative idr thresholded peaks ENCSR574XEO ChIP-seq EFO:0002067 K562 cell line Homo sapiens NUFIP1-human ENCAB558VPN DNA False 2018-01-31 ENCODE 1, 2 ENCFF419RSJ, ENCFF790CZA, ENCFF895XVM, ENCFF994UGA 45706 ENCODE Processing Pipeline fbe7fec1e33676d45a7a693a7ba4c58d https://www.encodeproject.org/files/ENCFF909TDT/@@download/ENCFF909TDT.bed.gz GRCh38 released experiment not submitted to GEO partially characterized antibody ENCFF877OMQ bigWig signal p-value ENCSR574XEO ChIP-seq EFO:0002067 K562 cell line Homo sapiens NUFIP1-human ENCAB558VPN DNA False 2018-01-31 ENCODE 2 ENCFF702BVO, ENCFF720AUK, ENCFF796JTX 1425751999 ENCODE Processing Pipeline c6b5c0c5d8624d95ee824600292824a0 https://www.encodeproject.org/files/ENCFF877OMQ/@@download/ENCFF877OMQ.bigWig GRCh38 released experiment not submitted to GEO partially characterized antibody ENCFF885JMZ bed narrowPeak optimal idr thresholded peaks ENCSR574XEO ChIP-seq EFO:0002067 K562 cell line Homo sapiens NUFIP1-human ENCAB558VPN DNA False 2018-01-31 ENCODE 1, 2 ENCFF419RSJ, ENCFF790CZA, ENCFF895XVM, ENCFF994UGA 68881 ENCODE Processing Pipeline fb7d9eb59e98bcd1f916e31fabfb3306 https://www.encodeproject.org/files/ENCFF885JMZ/@@download/ENCFF885JMZ.bed.gz GRCh38 released experiment not submitted to GEO partially characterized antibody ENCFF531YTT bigWig signal p-value ENCSR574XEO ChIP-seq EFO:0002067 K562 cell line Homo sapiens NUFIP1-human ENCAB558VPN DNA False 2018-01-31 ENCODE 1 ENCFF379VLE, ENCFF720AUK, ENCFF796JTX 1212107292 ENCODE Processing Pipeline 29f8f2430f45ff827025bfa6d7c14544 https://www.encodeproject.org/files/ENCFF531YTT/@@download/ENCFF531YTT.bigWig GRCh38 released experiment not submitted to GEO partially characterized antibody ENCFF716BTN bigWig fold change over control ENCSR574XEO ChIP-seq EFO:0002067 K562 cell line Homo sapiens NUFIP1-human ENCAB558VPN DNA False 2018-01-31 ENCODE 2 ENCFF702BVO, ENCFF720AUK, ENCFF796JTX 1377960099 ENCODE Processing Pipeline c7a1ec2dc1de9757e51d0a3675de5b19 https://www.encodeproject.org/files/ENCFF716BTN/@@download/ENCFF716BTN.bigWig GRCh38 released experiment not submitted to GEO partially characterized antibody ENCFF790CZA bed narrowPeak peaks ENCSR574XEO ChIP-seq EFO:0002067 K562 cell line Homo sapiens NUFIP1-human ENCAB558VPN DNA False 2018-01-31 ENCODE 2 ENCFF702BVO, ENCFF720AUK, ENCFF796JTX 6433102 ENCODE Processing Pipeline e452ffd1407940d3b0c1b722e3ce417e https://www.encodeproject.org/files/ENCFF790CZA/@@download/ENCFF790CZA.bed.gz GRCh38 released experiment not submitted to GEO partially characterized antibody ENCFF994UGA bed narrowPeak peaks ENCSR574XEO ChIP-seq EFO:0002067 K562 cell line Homo sapiens NUFIP1-human ENCAB558VPN DNA False 2018-01-31 ENCODE 1, 2 ENCFF379VLE, ENCFF702BVO, ENCFF720AUK, ENCFF796JTX 7153495 ENCODE Processing Pipeline 6a787d4501afae50b3db52e59a2de51b https://www.encodeproject.org/files/ENCFF994UGA/@@download/ENCFF994UGA.bed.gz GRCh38 released experiment not submitted to GEO partially characterized antibody ENCFF986OZX bigBed narrowPeak optimal idr thresholded peaks ENCSR574XEO ChIP-seq EFO:0002067 K562 cell line Homo sapiens NUFIP1-human ENCAB558VPN DNA False 2018-01-31 ENCODE 1, 2 ENCFF885JMZ 188519 ENCODE Processing Pipeline 65b19e3d6e249712b79b38497380afbf https://www.encodeproject.org/files/ENCFF986OZX/@@download/ENCFF986OZX.bigBed GRCh38 released experiment not submitted to GEO partially characterized antibody ENCFF895XVM bed narrowPeak peaks ENCSR574XEO ChIP-seq EFO:0002067 K562 cell line Homo sapiens NUFIP1-human ENCAB558VPN DNA False 2018-01-31 ENCODE 1 ENCFF379VLE, ENCFF720AUK, ENCFF796JTX 6438428 ENCODE Processing Pipeline 051a846fcb3b28f7dc66ef4f383d6f22 https://www.encodeproject.org/files/ENCFF895XVM/@@download/ENCFF895XVM.bed.gz GRCh38 released experiment not submitted to GEO partially characterized antibody ENCFF140QWR bigBed narrowPeak peaks ENCSR574XEO ChIP-seq EFO:0002067 K562 cell line Homo sapiens NUFIP1-human ENCAB558VPN DNA False 2018-01-31 ENCODE 1 ENCFF895XVM 11263504 ENCODE Processing Pipeline 04e424e7d1bf75fa45ef1bae74a715fb https://www.encodeproject.org/files/ENCFF140QWR/@@download/ENCFF140QWR.bigBed GRCh38 released experiment not submitted to GEO partially characterized antibody ENCFF062XBC bigBed narrowPeak peaks ENCSR574XEO ChIP-seq EFO:0002067 K562 cell line Homo sapiens NUFIP1-human ENCAB558VPN DNA False 2018-01-31 ENCODE 1, 2 ENCFF994UGA 11159944 ENCODE Processing Pipeline ddeaec18dc697755092634afe3f88296 https://www.encodeproject.org/files/ENCFF062XBC/@@download/ENCFF062XBC.bigBed GRCh38 released experiment not submitted to GEO partially characterized antibody ENCFF580LOU bigBed narrowPeak conservative idr thresholded peaks ENCSR574XEO ChIP-seq EFO:0002067 K562 cell line Homo sapiens NUFIP1-human ENCAB558VPN DNA False 2018-01-31 ENCODE 1, 2 ENCFF909TDT 149231 ENCODE Processing Pipeline ffcb00180e8a325a163cfd92e5b07aee https://www.encodeproject.org/files/ENCFF580LOU/@@download/ENCFF580LOU.bigBed GRCh38 released experiment not submitted to GEO partially characterized antibody ENCFF996PXA fastq reads ENCSR030OKC ChIP-seq EFO:0002067 K562 cell line Homo sapiens DROSHA-human ENCAB953TNR DNA SDS formaldehyde False 2016-10-31 ENCODE 1 1 40 single-ended 341204000 Xiang-Dong Fu, UCSD 834974fc75ca99277f124d2d97218161 https://www.encodeproject.org/files/ENCFF996PXA/@@download/ENCFF996PXA.fastq.gz Illumina HiSeq 2000 /files/ENCFF521UDO/ archived borderline replicate concordance, low read length insufficient read depth ENCFF450WTQ fastq reads ENCSR030OKC ChIP-seq EFO:0002067 K562 cell line Homo sapiens DROSHA-human ENCAB953TNR DNA SDS formaldehyde False 2016-10-31 ENCODE 2 1 40 single-ended 364419676 Xiang-Dong Fu, UCSD 87491466b08c5ea82c471bf709e77684 https://www.encodeproject.org/files/ENCFF450WTQ/@@download/ENCFF450WTQ.fastq.gz Illumina HiSeq 2000 /files/ENCFF343MYT/ archived borderline replicate concordance, low read length insufficient read depth ENCFF643FQM bam alignments ENCSR030OKC ChIP-seq EFO:0002067 K562 cell line Homo sapiens DROSHA-human ENCAB953TNR DNA SDS formaldehyde False 2016-10-31 ENCODE 2 40 ENCFF450WTQ, ENCFF807MUK 340521552 ENCODE Processing Pipeline f96495d12f3ba33f47b567d298703928 https://www.encodeproject.org/files/ENCFF643FQM/@@download/ENCFF643FQM.bam hg19 archived borderline replicate concordance, low read length insufficient read depth ENCFF435MFF bam alignments ENCSR030OKC ChIP-seq EFO:0002067 K562 cell line Homo sapiens DROSHA-human ENCAB953TNR DNA SDS formaldehyde False 2016-10-31 ENCODE 1 40 ENCFF807MUK, ENCFF996PXA 307297610 ENCODE Processing Pipeline b592dec8e5e798f31c42a8c2718e60d1 https://www.encodeproject.org/files/ENCFF435MFF/@@download/ENCFF435MFF.bam hg19 archived borderline replicate concordance, low read length insufficient read depth ENCFF979GPM bigWig signal p-value ENCSR030OKC ChIP-seq EFO:0002067 K562 cell line Homo sapiens DROSHA-human ENCAB953TNR DNA SDS formaldehyde False 2016-10-31 ENCODE 1 ENCFF177GKX, ENCFF435MFF 472246823 ENCODE Processing Pipeline 1b284c54525d8b99374ba4942cd4936b https://www.encodeproject.org/files/ENCFF979GPM/@@download/ENCFF979GPM.bigWig hg19 archived borderline replicate concordance, low read length insufficient read depth ENCFF069KGN bigWig fold change over control ENCSR030OKC ChIP-seq EFO:0002067 K562 cell line Homo sapiens DROSHA-human ENCAB953TNR DNA SDS formaldehyde False 2016-10-31 ENCODE 1 ENCFF177GKX, ENCFF435MFF 233684876 ENCODE Processing Pipeline 656bf1f2d27e35ab51fbe5a7605597b3 https://www.encodeproject.org/files/ENCFF069KGN/@@download/ENCFF069KGN.bigWig hg19 archived borderline replicate concordance, low read length insufficient read depth ENCFF858ATF bigWig fold change over control ENCSR030OKC ChIP-seq EFO:0002067 K562 cell line Homo sapiens DROSHA-human ENCAB953TNR DNA SDS formaldehyde False 2016-10-31 ENCODE 2 ENCFF643FQM, ENCFF993VCM 252625286 ENCODE Processing Pipeline 8407794737c1f65aacb61e39bfda3f6d https://www.encodeproject.org/files/ENCFF858ATF/@@download/ENCFF858ATF.bigWig hg19 archived borderline replicate concordance, low read length insufficient read depth ENCFF147MQS bigWig fold change over control ENCSR030OKC ChIP-seq EFO:0002067 K562 cell line Homo sapiens DROSHA-human ENCAB953TNR DNA SDS formaldehyde False 2016-10-31 ENCODE 1, 2 ENCFF177GKX, ENCFF435MFF, ENCFF643FQM, ENCFF993VCM 615917580 ENCODE Processing Pipeline ac133dfe94e0c772521d7cce3ccb1b3d https://www.encodeproject.org/files/ENCFF147MQS/@@download/ENCFF147MQS.bigWig hg19 archived borderline replicate concordance, low read length insufficient read depth ENCFF730RSL bigBed narrowPeak peaks ENCSR030OKC ChIP-seq EFO:0002067 K562 cell line Homo sapiens DROSHA-human ENCAB953TNR DNA SDS formaldehyde False 2016-10-31 ENCODE 2 ENCFF854MYR 10683919 ENCODE Processing Pipeline 0c736a573fb1c9e446c61693bc323b5b https://www.encodeproject.org/files/ENCFF730RSL/@@download/ENCFF730RSL.bigBed hg19 archived borderline replicate concordance, low read length insufficient read depth ENCFF538LDZ bigWig signal p-value ENCSR030OKC ChIP-seq EFO:0002067 K562 cell line Homo sapiens DROSHA-human ENCAB953TNR DNA SDS formaldehyde False 2016-10-31 ENCODE 2 ENCFF643FQM, ENCFF993VCM 537774150 ENCODE Processing Pipeline ffdb5902ff3e83c0dc4b1638dc6313c9 https://www.encodeproject.org/files/ENCFF538LDZ/@@download/ENCFF538LDZ.bigWig hg19 archived borderline replicate concordance, low read length insufficient read depth ENCFF904BOW bigWig signal p-value ENCSR030OKC ChIP-seq EFO:0002067 K562 cell line Homo sapiens DROSHA-human ENCAB953TNR DNA SDS formaldehyde False 2016-10-31 ENCODE 1, 2 ENCFF177GKX, ENCFF435MFF, ENCFF643FQM, ENCFF993VCM 821864556 ENCODE Processing Pipeline 23dc3a67f02f63ccf36322018c9b7934 https://www.encodeproject.org/files/ENCFF904BOW/@@download/ENCFF904BOW.bigWig hg19 archived borderline replicate concordance, low read length insufficient read depth ENCFF717LPP bed narrowPeak peaks ENCSR030OKC ChIP-seq EFO:0002067 K562 cell line Homo sapiens DROSHA-human ENCAB953TNR DNA SDS formaldehyde False 2016-10-31 ENCODE 1, 2 ENCFF177GKX, ENCFF435MFF, ENCFF643FQM, ENCFF993VCM 6500240 ENCODE Processing Pipeline 799c63de5103084b0dcc2eaf038ca545 https://www.encodeproject.org/files/ENCFF717LPP/@@download/ENCFF717LPP.bed.gz hg19 archived borderline replicate concordance, low read length insufficient read depth ENCFF154OXO bed narrowPeak peaks ENCSR030OKC ChIP-seq EFO:0002067 K562 cell line Homo sapiens DROSHA-human ENCAB953TNR DNA SDS formaldehyde False 2016-10-31 ENCODE 1 ENCFF177GKX, ENCFF435MFF 4379244 ENCODE Processing Pipeline d7cfe7aef02f66eff3fb9963dc498f08 https://www.encodeproject.org/files/ENCFF154OXO/@@download/ENCFF154OXO.bed.gz hg19 archived borderline replicate concordance, low read length insufficient read depth ENCFF854MYR bed narrowPeak peaks ENCSR030OKC ChIP-seq EFO:0002067 K562 cell line Homo sapiens DROSHA-human ENCAB953TNR DNA SDS formaldehyde False 2016-10-31 ENCODE 2 ENCFF643FQM, ENCFF993VCM 4537557 ENCODE Processing Pipeline 1e2a4cacc1678a09807e7bd6b4304764 https://www.encodeproject.org/files/ENCFF854MYR/@@download/ENCFF854MYR.bed.gz hg19 archived borderline replicate concordance, low read length insufficient read depth ENCFF067SBF bigBed narrowPeak peaks ENCSR030OKC ChIP-seq EFO:0002067 K562 cell line Homo sapiens DROSHA-human ENCAB953TNR DNA SDS formaldehyde False 2016-10-31 ENCODE 1 ENCFF154OXO 9895595 ENCODE Processing Pipeline 49a29ae0cf3d980a98dda297d76280f7 https://www.encodeproject.org/files/ENCFF067SBF/@@download/ENCFF067SBF.bigBed hg19 archived borderline replicate concordance, low read length insufficient read depth ENCFF066XRQ bigBed narrowPeak peaks ENCSR030OKC ChIP-seq EFO:0002067 K562 cell line Homo sapiens DROSHA-human ENCAB953TNR DNA SDS formaldehyde False 2016-10-31 ENCODE 1, 2 ENCFF717LPP 13324635 ENCODE Processing Pipeline 7a9b2fa4c0932f01407e7e86a8ca453e https://www.encodeproject.org/files/ENCFF066XRQ/@@download/ENCFF066XRQ.bigBed hg19 archived borderline replicate concordance, low read length insufficient read depth ENCFF808VYI bam unfiltered alignments ENCSR030OKC ChIP-seq EFO:0002067 K562 cell line Homo sapiens DROSHA-human ENCAB953TNR DNA SDS formaldehyde False 2016-10-31 ENCODE 2 ENCFF450WTQ, ENCFF643CGH 510024761 ENCODE Processing Pipeline 5cfdf3167134b37e46275db4d5cf075c https://www.encodeproject.org/files/ENCFF808VYI/@@download/ENCFF808VYI.bam GRCh38 archived borderline replicate concordance, low read length insufficient read depth ENCFF433EIA bam unfiltered alignments ENCSR030OKC ChIP-seq EFO:0002067 K562 cell line Homo sapiens DROSHA-human ENCAB953TNR DNA SDS formaldehyde False 2016-10-31 ENCODE 1 ENCFF643CGH, ENCFF996PXA 472212585 ENCODE Processing Pipeline f12b08effd41b723139502d6a6eee173 https://www.encodeproject.org/files/ENCFF433EIA/@@download/ENCFF433EIA.bam GRCh38 archived borderline replicate concordance, low read length insufficient read depth ENCFF569XLF bam alignments ENCSR030OKC ChIP-seq EFO:0002067 K562 cell line Homo sapiens DROSHA-human ENCAB953TNR DNA SDS formaldehyde False 2016-10-31 ENCODE 2 40 ENCFF450WTQ, ENCFF643CGH 340167968 ENCODE Processing Pipeline 413d1ca3ae2668d43138f79b850acb07 https://www.encodeproject.org/files/ENCFF569XLF/@@download/ENCFF569XLF.bam GRCh38 archived borderline replicate concordance, low read length insufficient read depth ENCFF824KAR bam alignments ENCSR030OKC ChIP-seq EFO:0002067 K562 cell line Homo sapiens DROSHA-human ENCAB953TNR DNA SDS formaldehyde False 2016-10-31 ENCODE 1 40 ENCFF643CGH, ENCFF996PXA 306961848 ENCODE Processing Pipeline 09021a4038467b978f553e4bb9606b10 https://www.encodeproject.org/files/ENCFF824KAR/@@download/ENCFF824KAR.bam GRCh38 archived borderline replicate concordance, low read length insufficient read depth ENCFF432IQG bigWig signal p-value ENCSR030OKC ChIP-seq EFO:0002067 K562 cell line Homo sapiens DROSHA-human ENCAB953TNR DNA SDS formaldehyde False 2016-10-31 ENCODE 2 ENCFF569XLF, ENCFF584ERB 537727227 ENCODE Processing Pipeline 0e3777ff9e132c8871294ff213df4273 https://www.encodeproject.org/files/ENCFF432IQG/@@download/ENCFF432IQG.bigWig GRCh38 archived borderline replicate concordance, low read length insufficient read depth ENCFF808PHT bigWig signal p-value ENCSR030OKC ChIP-seq EFO:0002067 K562 cell line Homo sapiens DROSHA-human ENCAB953TNR DNA SDS formaldehyde False 2016-10-31 ENCODE 1, 2 ENCFF092OLM, ENCFF569XLF, ENCFF584ERB, ENCFF824KAR 886957229 ENCODE Processing Pipeline a61e47c710834c622e91236c4da8887d https://www.encodeproject.org/files/ENCFF808PHT/@@download/ENCFF808PHT.bigWig GRCh38 archived borderline replicate concordance, low read length insufficient read depth ENCFF808XAW bigWig signal p-value ENCSR030OKC ChIP-seq EFO:0002067 K562 cell line Homo sapiens DROSHA-human ENCAB953TNR DNA SDS formaldehyde False 2016-10-31 ENCODE 1 ENCFF092OLM, ENCFF824KAR 514178017 ENCODE Processing Pipeline f7c1b8a1510fb551e0564f33dfbab7b4 https://www.encodeproject.org/files/ENCFF808XAW/@@download/ENCFF808XAW.bigWig GRCh38 archived borderline replicate concordance, low read length insufficient read depth ENCFF334PVU bigWig fold change over control ENCSR030OKC ChIP-seq EFO:0002067 K562 cell line Homo sapiens DROSHA-human ENCAB953TNR DNA SDS formaldehyde False 2016-10-31 ENCODE 1 ENCFF092OLM, ENCFF824KAR 228739479 ENCODE Processing Pipeline ce52b485b01cd842e674d2cc86c70063 https://www.encodeproject.org/files/ENCFF334PVU/@@download/ENCFF334PVU.bigWig GRCh38 archived borderline replicate concordance, low read length insufficient read depth ENCFF382UYR bigWig fold change over control ENCSR030OKC ChIP-seq EFO:0002067 K562 cell line Homo sapiens DROSHA-human ENCAB953TNR DNA SDS formaldehyde False 2016-10-31 ENCODE 1, 2 ENCFF092OLM, ENCFF569XLF, ENCFF584ERB, ENCFF824KAR 615721723 ENCODE Processing Pipeline fd7f866f9e736d57c67c0c7f36b71e79 https://www.encodeproject.org/files/ENCFF382UYR/@@download/ENCFF382UYR.bigWig GRCh38 archived borderline replicate concordance, low read length insufficient read depth ENCFF147MTI bigWig fold change over control ENCSR030OKC ChIP-seq EFO:0002067 K562 cell line Homo sapiens DROSHA-human ENCAB953TNR DNA SDS formaldehyde False 2016-10-31 ENCODE 2 ENCFF569XLF, ENCFF584ERB 251352527 ENCODE Processing Pipeline 27dd9dcee38585fc27b072a8becc6302 https://www.encodeproject.org/files/ENCFF147MTI/@@download/ENCFF147MTI.bigWig GRCh38 archived borderline replicate concordance, low read length insufficient read depth ENCFF625GTG bed narrowPeak peaks ENCSR030OKC ChIP-seq EFO:0002067 K562 cell line Homo sapiens DROSHA-human ENCAB953TNR DNA SDS formaldehyde False 2016-10-31 ENCODE 2 ENCFF569XLF, ENCFF584ERB 4624336 ENCODE Processing Pipeline 38784bcb4704d1e781645370db6ab6bc https://www.encodeproject.org/files/ENCFF625GTG/@@download/ENCFF625GTG.bed.gz GRCh38 archived borderline replicate concordance, low read length insufficient read depth ENCFF777DYL bed narrowPeak peaks ENCSR030OKC ChIP-seq EFO:0002067 K562 cell line Homo sapiens DROSHA-human ENCAB953TNR DNA SDS formaldehyde False 2016-10-31 ENCODE 1 ENCFF092OLM, ENCFF824KAR 3975684 ENCODE Processing Pipeline 336e3c4c1e28e0ee41ba0e5b6060be76 https://www.encodeproject.org/files/ENCFF777DYL/@@download/ENCFF777DYL.bed.gz GRCh38 archived borderline replicate concordance, low read length insufficient read depth ENCFF412RUZ bigBed narrowPeak peaks ENCSR030OKC ChIP-seq EFO:0002067 K562 cell line Homo sapiens DROSHA-human ENCAB953TNR DNA SDS formaldehyde False 2016-10-31 ENCODE 1 ENCFF777DYL 9324387 ENCODE Processing Pipeline 88a681f540fcde5adeccbc418fc77565 https://www.encodeproject.org/files/ENCFF412RUZ/@@download/ENCFF412RUZ.bigBed GRCh38 archived borderline replicate concordance, low read length insufficient read depth ENCFF710JTQ bed narrowPeak peaks ENCSR030OKC ChIP-seq EFO:0002067 K562 cell line Homo sapiens DROSHA-human ENCAB953TNR DNA SDS formaldehyde False 2016-10-31 ENCODE 1, 2 ENCFF092OLM, ENCFF569XLF, ENCFF584ERB, ENCFF824KAR 5944108 ENCODE Processing Pipeline e00c45c4475fa4d14715b7f29ed2735e https://www.encodeproject.org/files/ENCFF710JTQ/@@download/ENCFF710JTQ.bed.gz GRCh38 archived borderline replicate concordance, low read length insufficient read depth ENCFF452HNU bigBed narrowPeak peaks ENCSR030OKC ChIP-seq EFO:0002067 K562 cell line Homo sapiens DROSHA-human ENCAB953TNR DNA SDS formaldehyde False 2016-10-31 ENCODE 2 ENCFF625GTG 10479389 ENCODE Processing Pipeline d523fd1f0532dc3726767483d6a6bf53 https://www.encodeproject.org/files/ENCFF452HNU/@@download/ENCFF452HNU.bigBed GRCh38 archived borderline replicate concordance, low read length insufficient read depth ENCFF388HHI bigBed narrowPeak peaks ENCSR030OKC ChIP-seq EFO:0002067 K562 cell line Homo sapiens DROSHA-human ENCAB953TNR DNA SDS formaldehyde False 2016-10-31 ENCODE 1, 2 ENCFF710JTQ 13411606 ENCODE Processing Pipeline 875d2610e1642868eeac9f9704a5b753 https://www.encodeproject.org/files/ENCFF388HHI/@@download/ENCFF388HHI.bigBed GRCh38 archived borderline replicate concordance, low read length insufficient read depth ENCFF512CXE bed narrowPeak conservative idr thresholded peaks ENCSR030OKC ChIP-seq EFO:0002067 K562 cell line Homo sapiens DROSHA-human ENCAB953TNR DNA SDS formaldehyde False 2016-10-31 ENCODE 1, 2 ENCFF419RSJ, ENCFF625GTG, ENCFF710JTQ, ENCFF777DYL 753 ENCODE Processing Pipeline a01eb719850f7fb678dd4ac41b01e22e https://www.encodeproject.org/files/ENCFF512CXE/@@download/ENCFF512CXE.bed.gz GRCh38 archived borderline replicate concordance, low read length insufficient read depth ENCFF043EDB bigBed narrowPeak conservative idr thresholded peaks ENCSR030OKC ChIP-seq EFO:0002067 K562 cell line Homo sapiens DROSHA-human ENCAB953TNR DNA SDS formaldehyde False 2016-10-31 ENCODE 1, 2 ENCFF512CXE 35800 ENCODE Processing Pipeline 946f759a6708c4fe17909154d3e1ed33 https://www.encodeproject.org/files/ENCFF043EDB/@@download/ENCFF043EDB.bigBed GRCh38 archived borderline replicate concordance, low read length insufficient read depth ENCFF416DAC bed narrowPeak optimal idr thresholded peaks ENCSR030OKC ChIP-seq EFO:0002067 K562 cell line Homo sapiens DROSHA-human ENCAB953TNR DNA SDS formaldehyde False 2016-10-31 ENCODE 1, 2 ENCFF419RSJ, ENCFF625GTG, ENCFF710JTQ, ENCFF777DYL 1017 ENCODE Processing Pipeline 5008782c3093bb9cfcc4a80c1d713e88 https://www.encodeproject.org/files/ENCFF416DAC/@@download/ENCFF416DAC.bed.gz GRCh38 archived borderline replicate concordance, low read length insufficient read depth ENCFF736XWP bigBed narrowPeak optimal idr thresholded peaks ENCSR030OKC ChIP-seq EFO:0002067 K562 cell line Homo sapiens DROSHA-human ENCAB953TNR DNA SDS formaldehyde False 2016-10-31 ENCODE 1, 2 ENCFF416DAC 36747 ENCODE Processing Pipeline f4c4a763a222c2de7208adcfe805891f https://www.encodeproject.org/files/ENCFF736XWP/@@download/ENCFF736XWP.bigBed GRCh38 archived borderline replicate concordance, low read length insufficient read depth ENCFF867OXC bigBed narrowPeak optimal idr thresholded peaks ENCSR030OKC ChIP-seq EFO:0002067 K562 cell line Homo sapiens DROSHA-human ENCAB953TNR DNA SDS formaldehyde False 2016-10-31 ENCODE 1, 2 ENCFF921XOS 22260 ENCODE Processing Pipeline c109fc4209356e8edb7102c03d75da13 https://www.encodeproject.org/files/ENCFF867OXC/@@download/ENCFF867OXC.bigBed hg19 archived borderline replicate concordance, low read length insufficient read depth ENCFF563DNP bigBed narrowPeak conservative idr thresholded peaks ENCSR030OKC ChIP-seq EFO:0002067 K562 cell line Homo sapiens DROSHA-human ENCAB953TNR DNA SDS formaldehyde False 2016-10-31 ENCODE 1, 2 ENCFF641ZHR 15186 ENCODE Processing Pipeline 082cdffa74f25a3013acf5e3977e2699 https://www.encodeproject.org/files/ENCFF563DNP/@@download/ENCFF563DNP.bigBed hg19 archived borderline replicate concordance, low read length insufficient read depth ENCFF641ZHR bed narrowPeak conservative idr thresholded peaks ENCSR030OKC ChIP-seq EFO:0002067 K562 cell line Homo sapiens DROSHA-human ENCAB953TNR DNA SDS formaldehyde False 2016-10-31 ENCODE 1, 2 ENCFF001TDO, ENCFF154OXO, ENCFF717LPP, ENCFF854MYR 466 ENCODE Processing Pipeline 66a78365725ee9d43fbc1e3772b67687 https://www.encodeproject.org/files/ENCFF641ZHR/@@download/ENCFF641ZHR.bed.gz hg19 archived borderline replicate concordance, low read length insufficient read depth ENCFF921XOS bed narrowPeak optimal idr thresholded peaks ENCSR030OKC ChIP-seq EFO:0002067 K562 cell line Homo sapiens DROSHA-human ENCAB953TNR DNA SDS formaldehyde False 2016-10-31 ENCODE 1, 2 ENCFF001TDO, ENCFF154OXO, ENCFF717LPP, ENCFF854MYR 619 ENCODE Processing Pipeline 48a195a2753816ed34388640bcbe4e0f https://www.encodeproject.org/files/ENCFF921XOS/@@download/ENCFF921XOS.bed.gz hg19 archived borderline replicate concordance, low read length insufficient read depth ENCFF378FKS bam unfiltered alignments ENCSR030OKC ChIP-seq EFO:0002067 K562 cell line Homo sapiens DROSHA-human ENCAB953TNR DNA SDS formaldehyde False 2016-10-31 ENCODE 2 40 ENCFF450WTQ, ENCFF807MUK 507940677 ENCODE Processing Pipeline 5690702b4c81bfde3f4b5be1380e2635 https://www.encodeproject.org/files/ENCFF378FKS/@@download/ENCFF378FKS.bam hg19 archived borderline replicate concordance, low read length insufficient read depth ENCFF446QKH bam unfiltered alignments ENCSR030OKC ChIP-seq EFO:0002067 K562 cell line Homo sapiens DROSHA-human ENCAB953TNR DNA SDS formaldehyde False 2016-10-31 ENCODE 1 40 ENCFF807MUK, ENCFF996PXA 470443608 ENCODE Processing Pipeline 7d6fc4db5e8231e5ad979400c5eee064 https://www.encodeproject.org/files/ENCFF446QKH/@@download/ENCFF446QKH.bam hg19 archived borderline replicate concordance, low read length insufficient read depth ENCFF502MLY fastq reads ENCSR851XLW ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF830-human ENCAB969PZN DNA False 2018-01-26 ENCODE 2 1 100 paired-ended 1 ENCFF921RGY 4060491102 Michael Snyder, Stanford e23178ef4c345e06c67a5c1fff54d678 https://www.encodeproject.org/files/ENCFF502MLY/@@download/ENCFF502MLY.fastq.gz Illumina HiSeq 4000 /files/ENCFF259GQA/ released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF340GSU fastq reads ENCSR851XLW ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF830-human ENCAB969PZN DNA False 2018-01-26 ENCODE 1 1 100 paired-ended 1 ENCFF167GOB 4537465590 Michael Snyder, Stanford b0c0816279b20f36f5b72b85dccc5082 https://www.encodeproject.org/files/ENCFF340GSU/@@download/ENCFF340GSU.fastq.gz Illumina HiSeq 4000 /files/ENCFF498JMO/ released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF921RGY fastq reads ENCSR851XLW ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF830-human ENCAB969PZN DNA False 2018-01-26 ENCODE 2 1 100 paired-ended 2 ENCFF502MLY 4563481348 Michael Snyder, Stanford de03695ec1ee41430d0f945cd196f830 https://www.encodeproject.org/files/ENCFF921RGY/@@download/ENCFF921RGY.fastq.gz Illumina HiSeq 4000 /files/ENCFF837MIV/ released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF167GOB fastq reads ENCSR851XLW ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF830-human ENCAB969PZN DNA False 2018-01-26 ENCODE 1 1 100 paired-ended 2 ENCFF340GSU 4680478355 Michael Snyder, Stanford c7ded66dd3eabc3cbf335a44669cb57f https://www.encodeproject.org/files/ENCFF167GOB/@@download/ENCFF167GOB.fastq.gz Illumina HiSeq 4000 /files/ENCFF502GTS/ released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF929DJW bam unfiltered alignments ENCSR851XLW ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF830-human ENCAB969PZN DNA False 2018-01-26 ENCODE 1 100 ENCFF167GOB, ENCFF340GSU, ENCFF807MUK 8186510537 ENCODE Processing Pipeline 139e44d96756361417b81dd8acdebf17 https://www.encodeproject.org/files/ENCFF929DJW/@@download/ENCFF929DJW.bam hg19 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF338KIS bam unfiltered alignments ENCSR851XLW ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF830-human ENCAB969PZN DNA False 2018-01-26 ENCODE 2 100 ENCFF502MLY, ENCFF807MUK, ENCFF921RGY 8004988844 ENCODE Processing Pipeline 3aebbdc0b35b7938d1fb75959a03737e https://www.encodeproject.org/files/ENCFF338KIS/@@download/ENCFF338KIS.bam hg19 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF987QNU bam unfiltered alignments ENCSR851XLW ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF830-human ENCAB969PZN DNA False 2018-01-26 ENCODE 1 100 ENCFF167GOB, ENCFF340GSU, ENCFF643CGH 8185563593 ENCODE Processing Pipeline 12b0347115e50c36cea95d3b3549c605 https://www.encodeproject.org/files/ENCFF987QNU/@@download/ENCFF987QNU.bam GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF169MTD bam unfiltered alignments ENCSR851XLW ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF830-human ENCAB969PZN DNA False 2018-01-26 ENCODE 2 100 ENCFF502MLY, ENCFF643CGH, ENCFF921RGY 8010081457 ENCODE Processing Pipeline e34efa5808e9b99a1f717170b424f7e9 https://www.encodeproject.org/files/ENCFF169MTD/@@download/ENCFF169MTD.bam GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF470CJT bam alignments ENCSR851XLW ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF830-human ENCAB969PZN DNA False 2018-01-26 ENCODE 1 100 ENCFF167GOB, ENCFF340GSU, ENCFF643CGH 3721118528 ENCODE Processing Pipeline 08caded1ce59894cdfca3ac3668bd6ac https://www.encodeproject.org/files/ENCFF470CJT/@@download/ENCFF470CJT.bam GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF203FSJ bam alignments ENCSR851XLW ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF830-human ENCAB969PZN DNA False 2018-01-26 ENCODE 1 100 ENCFF167GOB, ENCFF340GSU, ENCFF807MUK 3718465608 ENCODE Processing Pipeline 2e371b7e96000cf24a5f7a4d166f94f9 https://www.encodeproject.org/files/ENCFF203FSJ/@@download/ENCFF203FSJ.bam hg19 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF696YRO bam alignments ENCSR851XLW ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF830-human ENCAB969PZN DNA False 2018-01-26 ENCODE 2 100 ENCFF502MLY, ENCFF807MUK, ENCFF921RGY 4990668446 ENCODE Processing Pipeline b49483782c6b7ceec5acb4450af7326d https://www.encodeproject.org/files/ENCFF696YRO/@@download/ENCFF696YRO.bam hg19 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF866BCZ bam alignments ENCSR851XLW ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF830-human ENCAB969PZN DNA False 2018-01-26 ENCODE 2 100 ENCFF502MLY, ENCFF643CGH, ENCFF921RGY 4994792368 ENCODE Processing Pipeline 7ff723f2bcdf0612c6d4b6a7b6028a07 https://www.encodeproject.org/files/ENCFF866BCZ/@@download/ENCFF866BCZ.bam GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF401MVV bigWig signal p-value ENCSR851XLW ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF830-human ENCAB969PZN DNA False 2018-01-26 ENCODE 1 ENCFF160VXC, ENCFF203FSJ 969328360 ENCODE Processing Pipeline cc940e936ea452848e4a4dd7db922b4f https://www.encodeproject.org/files/ENCFF401MVV/@@download/ENCFF401MVV.bigWig hg19 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF075EVT bigWig signal p-value ENCSR851XLW ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF830-human ENCAB969PZN DNA False 2018-01-26 ENCODE 1, 2 ENCFF160VXC, ENCFF203FSJ, ENCFF696YRO, ENCFF834TUP 2253774105 ENCODE Processing Pipeline 87ef5fb1c44295a71564c9c7a17495fe https://www.encodeproject.org/files/ENCFF075EVT/@@download/ENCFF075EVT.bigWig hg19 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF340ANN bigWig signal p-value ENCSR851XLW ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF830-human ENCAB969PZN DNA False 2018-01-26 ENCODE 2 ENCFF160VXC, ENCFF696YRO, ENCFF834TUP 1926938727 ENCODE Processing Pipeline 228d3cfaa2786cbc6796b0aba60cc502 https://www.encodeproject.org/files/ENCFF340ANN/@@download/ENCFF340ANN.bigWig hg19 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF957MVR bigWig fold change over control ENCSR851XLW ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF830-human ENCAB969PZN DNA False 2018-01-26 ENCODE 1 ENCFF160VXC, ENCFF203FSJ 1303821855 ENCODE Processing Pipeline a8f66e527afcd4fa040bee1b6a7a9674 https://www.encodeproject.org/files/ENCFF957MVR/@@download/ENCFF957MVR.bigWig hg19 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF880CYC bigWig fold change over control ENCSR851XLW ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF830-human ENCAB969PZN DNA False 2018-01-26 ENCODE 2 ENCFF160VXC, ENCFF696YRO, ENCFF834TUP 1996727683 ENCODE Processing Pipeline 7dd18083fc400870c41ffcc7eb78ebc7 https://www.encodeproject.org/files/ENCFF880CYC/@@download/ENCFF880CYC.bigWig hg19 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF458WXS bigWig fold change over control ENCSR851XLW ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF830-human ENCAB969PZN DNA False 2018-01-26 ENCODE 1, 2 ENCFF160VXC, ENCFF203FSJ, ENCFF696YRO, ENCFF834TUP 2401151390 ENCODE Processing Pipeline df105241e8fcb67ec77de1949670b25b https://www.encodeproject.org/files/ENCFF458WXS/@@download/ENCFF458WXS.bigWig hg19 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF263GIU bed narrowPeak peaks ENCSR851XLW ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF830-human ENCAB969PZN DNA False 2018-01-26 ENCODE 1 ENCFF160VXC, ENCFF203FSJ 6683557 ENCODE Processing Pipeline 34dbe85b30546fabcbdbabec5003e12f https://www.encodeproject.org/files/ENCFF263GIU/@@download/ENCFF263GIU.bed.gz hg19 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF350ETZ bed narrowPeak peaks ENCSR851XLW ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF830-human ENCAB969PZN DNA False 2018-01-26 ENCODE 2 ENCFF160VXC, ENCFF696YRO, ENCFF834TUP 7122842 ENCODE Processing Pipeline bbcecdde973b7e316a2696ae58a04710 https://www.encodeproject.org/files/ENCFF350ETZ/@@download/ENCFF350ETZ.bed.gz hg19 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF551KDQ bed narrowPeak peaks ENCSR851XLW ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF830-human ENCAB969PZN DNA False 2018-01-26 ENCODE 1, 2 ENCFF160VXC, ENCFF203FSJ, ENCFF696YRO, ENCFF834TUP 7195368 ENCODE Processing Pipeline ca8fb63b6d9af0ecc85e855de3ed9368 https://www.encodeproject.org/files/ENCFF551KDQ/@@download/ENCFF551KDQ.bed.gz hg19 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF019QRA bigBed narrowPeak peaks ENCSR851XLW ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF830-human ENCAB969PZN DNA False 2018-01-26 ENCODE 1 ENCFF263GIU 10851240 ENCODE Processing Pipeline 08d9bdf0162c9104e042e420b3855203 https://www.encodeproject.org/files/ENCFF019QRA/@@download/ENCFF019QRA.bigBed hg19 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF919WDH bigBed narrowPeak peaks ENCSR851XLW ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF830-human ENCAB969PZN DNA False 2018-01-26 ENCODE 2 ENCFF350ETZ 10888442 ENCODE Processing Pipeline 6c480f8311e9caa36cbb67638bfae73c https://www.encodeproject.org/files/ENCFF919WDH/@@download/ENCFF919WDH.bigBed hg19 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF597OTE bigBed narrowPeak peaks ENCSR851XLW ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF830-human ENCAB969PZN DNA False 2018-01-26 ENCODE 1, 2 ENCFF551KDQ 12912345 ENCODE Processing Pipeline 8b98e54874fed634e4a1cf0d1b6d53f2 https://www.encodeproject.org/files/ENCFF597OTE/@@download/ENCFF597OTE.bigBed hg19 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF734IEM bed narrowPeak conservative idr thresholded peaks ENCSR851XLW ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF830-human ENCAB969PZN DNA False 2018-01-26 ENCODE 1, 2 ENCFF001TDO, ENCFF263GIU, ENCFF350ETZ, ENCFF551KDQ 5890 ENCODE Processing Pipeline 045aff3f9d5a619f9998a93a525a5287 https://www.encodeproject.org/files/ENCFF734IEM/@@download/ENCFF734IEM.bed.gz hg19 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF591RVG bigBed narrowPeak conservative idr thresholded peaks ENCSR851XLW ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF830-human ENCAB969PZN DNA False 2018-01-26 ENCODE 1, 2 ENCFF734IEM 85235 ENCODE Processing Pipeline 452fb513c1f06bd5466c498e451abf6b https://www.encodeproject.org/files/ENCFF591RVG/@@download/ENCFF591RVG.bigBed hg19 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF169XSG bigBed narrowPeak optimal idr thresholded peaks ENCSR851XLW ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF830-human ENCAB969PZN DNA False 2018-01-26 ENCODE 1, 2 ENCFF901AHW 114378 ENCODE Processing Pipeline 89adef53f8e9835947fc518d8c122355 https://www.encodeproject.org/files/ENCFF169XSG/@@download/ENCFF169XSG.bigBed hg19 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF901AHW bed narrowPeak optimal idr thresholded peaks ENCSR851XLW ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF830-human ENCAB969PZN DNA False 2018-01-26 ENCODE 1, 2 ENCFF001TDO, ENCFF263GIU, ENCFF350ETZ, ENCFF551KDQ 22828 ENCODE Processing Pipeline 93c38af1d8e55bb2b54ec7fbc84d696c https://www.encodeproject.org/files/ENCFF901AHW/@@download/ENCFF901AHW.bed.gz hg19 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF233VUE bigWig signal p-value ENCSR851XLW ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF830-human ENCAB969PZN DNA False 2018-01-26 ENCODE 1 ENCFF470CJT, ENCFF790TAN 1016394863 ENCODE Processing Pipeline 558010d8e3e94d78e3fae867eb6a86db https://www.encodeproject.org/files/ENCFF233VUE/@@download/ENCFF233VUE.bigWig GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF660JXS bigWig signal p-value ENCSR851XLW ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF830-human ENCAB969PZN DNA False 2018-01-26 ENCODE 2 ENCFF712WXB, ENCFF790TAN, ENCFF866BCZ 1750734387 ENCODE Processing Pipeline 1b821b2d57778afdf273301b83ffab64 https://www.encodeproject.org/files/ENCFF660JXS/@@download/ENCFF660JXS.bigWig GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF177ECT bigWig signal p-value ENCSR851XLW ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF830-human ENCAB969PZN DNA False 2018-01-26 ENCODE 1, 2 ENCFF470CJT, ENCFF712WXB, ENCFF790TAN, ENCFF866BCZ 2174138771 ENCODE Processing Pipeline 7bd4db77d72dda3f12fa4f76dbe0fb25 https://www.encodeproject.org/files/ENCFF177ECT/@@download/ENCFF177ECT.bigWig GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF222OSV bigWig fold change over control ENCSR851XLW ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF830-human ENCAB969PZN DNA False 2018-01-26 ENCODE 1 ENCFF470CJT, ENCFF790TAN 1316099989 ENCODE Processing Pipeline 4d9e39296d324877bca80df1960e098a https://www.encodeproject.org/files/ENCFF222OSV/@@download/ENCFF222OSV.bigWig GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF609TWF bigWig fold change over control ENCSR851XLW ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF830-human ENCAB969PZN DNA False 2018-01-26 ENCODE 2 ENCFF712WXB, ENCFF790TAN, ENCFF866BCZ 1988514687 ENCODE Processing Pipeline 374d5b43e22da4097efffb6510cf6e2e https://www.encodeproject.org/files/ENCFF609TWF/@@download/ENCFF609TWF.bigWig GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF243ALK bigWig fold change over control ENCSR851XLW ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF830-human ENCAB969PZN DNA False 2018-01-26 ENCODE 1, 2 ENCFF470CJT, ENCFF712WXB, ENCFF790TAN, ENCFF866BCZ 2381758741 ENCODE Processing Pipeline a00202390d115fd45087510fc9b9cc39 https://www.encodeproject.org/files/ENCFF243ALK/@@download/ENCFF243ALK.bigWig GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF210AFY bed narrowPeak peaks ENCSR851XLW ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF830-human ENCAB969PZN DNA False 2018-01-26 ENCODE 2 ENCFF712WXB, ENCFF790TAN, ENCFF866BCZ 7084349 ENCODE Processing Pipeline 13e3a74579567391dc3dc60bf58eac96 https://www.encodeproject.org/files/ENCFF210AFY/@@download/ENCFF210AFY.bed.gz GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF507OGO bigBed narrowPeak peaks ENCSR851XLW ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF830-human ENCAB969PZN DNA False 2018-01-26 ENCODE 1 ENCFF844WVW 10858798 ENCODE Processing Pipeline 4edaf13335abfa666e170473256f2ac3 https://www.encodeproject.org/files/ENCFF507OGO/@@download/ENCFF507OGO.bigBed GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF844WVW bed narrowPeak peaks ENCSR851XLW ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF830-human ENCAB969PZN DNA False 2018-01-26 ENCODE 1 ENCFF470CJT, ENCFF790TAN 6542160 ENCODE Processing Pipeline e85a487826b97a8bc004755b69257b80 https://www.encodeproject.org/files/ENCFF844WVW/@@download/ENCFF844WVW.bed.gz GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF010YGU bed narrowPeak peaks ENCSR851XLW ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF830-human ENCAB969PZN DNA False 2018-01-26 ENCODE 1, 2 ENCFF470CJT, ENCFF712WXB, ENCFF790TAN, ENCFF866BCZ 7189899 ENCODE Processing Pipeline 9d100b3836a60eeb1567da2b61b68033 https://www.encodeproject.org/files/ENCFF010YGU/@@download/ENCFF010YGU.bed.gz GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF183ZZV bigBed narrowPeak peaks ENCSR851XLW ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF830-human ENCAB969PZN DNA False 2018-01-26 ENCODE 2 ENCFF210AFY 10898646 ENCODE Processing Pipeline 2ed5d7f41fa07f3e87c9013c1f8f129f https://www.encodeproject.org/files/ENCFF183ZZV/@@download/ENCFF183ZZV.bigBed GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF361MUR bigBed narrowPeak peaks ENCSR851XLW ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF830-human ENCAB969PZN DNA False 2018-01-26 ENCODE 1, 2 ENCFF010YGU 12921966 ENCODE Processing Pipeline 25c49208dd5d9b2ee800d74b20621f34 https://www.encodeproject.org/files/ENCFF361MUR/@@download/ENCFF361MUR.bigBed GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF951OSW bed narrowPeak optimal idr thresholded peaks ENCSR851XLW ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF830-human ENCAB969PZN DNA False 2018-01-26 ENCODE 1, 2 ENCFF010YGU, ENCFF210AFY, ENCFF419RSJ, ENCFF844WVW 19637 ENCODE Processing Pipeline 7b054009b99792b51a2ab0f32346881d https://www.encodeproject.org/files/ENCFF951OSW/@@download/ENCFF951OSW.bed.gz GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF083PFA bigBed narrowPeak optimal idr thresholded peaks ENCSR851XLW ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF830-human ENCAB969PZN DNA False 2018-01-26 ENCODE 1, 2 ENCFF951OSW 109513 ENCODE Processing Pipeline e1d8df9ec9af184751f945481d555984 https://www.encodeproject.org/files/ENCFF083PFA/@@download/ENCFF083PFA.bigBed GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF266ALJ bed narrowPeak conservative idr thresholded peaks ENCSR851XLW ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF830-human ENCAB969PZN DNA False 2018-01-26 ENCODE 1, 2 ENCFF010YGU, ENCFF210AFY, ENCFF419RSJ, ENCFF844WVW 5558 ENCODE Processing Pipeline c6c53c0afe38a2d324e0ada981433fe0 https://www.encodeproject.org/files/ENCFF266ALJ/@@download/ENCFF266ALJ.bed.gz GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF495LAW bigBed narrowPeak conservative idr thresholded peaks ENCSR851XLW ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF830-human ENCAB969PZN DNA False 2018-01-26 ENCODE 1, 2 ENCFF266ALJ 94476 ENCODE Processing Pipeline e5ccc8101d714dd263cbc547b5d933a4 https://www.encodeproject.org/files/ENCFF495LAW/@@download/ENCFF495LAW.bigBed GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF000YJV bam alignments ENCSR000FAZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 1 ENCFF000YOR 437442717 Sherman Weissman, Yale 44619c384e614ee2a1525fd414e253b1 https://www.encodeproject.org/files/ENCFF000YJV/@@download/ENCFF000YJV.bam hg19 archived control low read depth, borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF000YJW bigBed narrowPeak peaks ENCSR000FAZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE ENCFF001VMQ 142433 Sherman Weissman, Yale 0430b3908ec95d6611e9c1e3bcb32e84 https://www.encodeproject.org/files/ENCFF000YJW/@@download/ENCFF000YJW.bigBed hg19 archived control low read depth, borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF000YJX bigWig signal ENCSR000FAZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 329080369 Sherman Weissman, Yale 7657c2708c007a28f91db4a1cabbc508 https://www.encodeproject.org/files/ENCFF000YJX/@@download/ENCFF000YJX.bigWig hg19 archived control low read depth, borderline replicate concordance biological replicates with identical biosample, missing derived_from insufficient read length, insufficient read depth ENCFF000YJY bam alignments ENCSR000FAZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 2 ENCFF000YOT 757538229 Sherman Weissman, Yale 373e5449bf1b93042f78a537ffc0fd7e https://www.encodeproject.org/files/ENCFF000YJY/@@download/ENCFF000YJY.bam hg19 archived control low read depth, borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF000YOR fastq reads ENCSR000FAZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 1 1 27 single-ended 335087508 Sherman Weissman, Yale c2d8e61846e50f012fdd159011913e18 https://www.encodeproject.org/files/ENCFF000YOR/@@download/ENCFF000YOR.fastq.gz Illumina Genome Analyzer /files/ENCFF000YOV/ released control low read depth, borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF000YOT fastq reads ENCSR000FAZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 2 1 27 single-ended 570318180 Sherman Weissman, Yale 7ee2d73df4b042bd396438a00e99a228 https://www.encodeproject.org/files/ENCFF000YOT/@@download/ENCFF000YOT.fastq.gz Illumina Genome Analyzer /files/ENCFF000YOV/ released control low read depth, borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF001VMQ bed narrowPeak peaks ENCSR000FAZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 46587 Sherman Weissman, Yale 4e22d0d1055653b9d9d5d0df8b4aa04d https://www.encodeproject.org/files/ENCFF001VMQ/@@download/ENCFF001VMQ.bed.gz hg19 archived control low read depth, borderline replicate concordance biological replicates with identical biosample, missing derived_from insufficient read length, insufficient read depth ENCFF002CWD bed narrowPeak optimal idr thresholded peaks ENCSR000FAZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 174210 ENCODE Consortium Analysis Working Group f2e6a896ed9f1597694b779de3fa7a23 https://www.encodeproject.org/files/ENCFF002CWD/@@download/ENCFF002CWD.bed.gz hg19 archived control low read depth, borderline replicate concordance biological replicates with identical biosample, missing derived_from insufficient read length, insufficient read depth ENCFF948ZPP bigBed narrowPeak optimal idr thresholded peaks ENCSR000FAZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE ENCFF002CWD 403446 ENCODE Consortium daae9ed3665350b86717e0106c9b0171 https://www.encodeproject.org/files/ENCFF948ZPP/@@download/ENCFF948ZPP.bigBed hg19 archived control low read depth, borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF929JOF bam alignments ENCSR000FAZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 1 27 ENCFF000YOR, ENCFF807MUK 283037583 ENCODE Processing Pipeline 32b3baa7de8975e05a049eebeb51bafd https://www.encodeproject.org/files/ENCFF929JOF/@@download/ENCFF929JOF.bam hg19 released control low read depth, borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF439NNR bam alignments ENCSR000FAZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 1 27 ENCFF000YOR, ENCFF643CGH 282690289 ENCODE Processing Pipeline 7f2e39549c861be276545cef4ef95c4c https://www.encodeproject.org/files/ENCFF439NNR/@@download/ENCFF439NNR.bam GRCh38 released control low read depth, borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF524XVD bam unfiltered alignments ENCSR000FAZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 1 27 ENCFF000YOR, ENCFF807MUK 438100396 ENCODE Processing Pipeline 0e5094fa13252689d09813ceceda1bb2 https://www.encodeproject.org/files/ENCFF524XVD/@@download/ENCFF524XVD.bam hg19 released control low read depth, borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF877JAH bam unfiltered alignments ENCSR000FAZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 1 27 ENCFF000YOR, ENCFF643CGH 439191445 ENCODE Processing Pipeline beb480d28545e13f9c8fe8086c9385e4 https://www.encodeproject.org/files/ENCFF877JAH/@@download/ENCFF877JAH.bam GRCh38 released control low read depth, borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF739YJA bam unfiltered alignments ENCSR000FAZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 2 27 ENCFF000YOT, ENCFF807MUK 758200490 ENCODE Processing Pipeline 6d504c6b87f117849b9c7049faeb8690 https://www.encodeproject.org/files/ENCFF739YJA/@@download/ENCFF739YJA.bam hg19 released control low read depth, borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF701IFH bam unfiltered alignments ENCSR000FAZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 2 27 ENCFF000YOT, ENCFF643CGH 760421496 ENCODE Processing Pipeline 0113cc7aa9c398e835bcb219a9d6ffd2 https://www.encodeproject.org/files/ENCFF701IFH/@@download/ENCFF701IFH.bam GRCh38 released control low read depth, borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF504AWB bam alignments ENCSR000FAZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 2 27 ENCFF000YOT, ENCFF807MUK 306291115 ENCODE Processing Pipeline 183bcd094a699e1e5acc01d75506e6d2 https://www.encodeproject.org/files/ENCFF504AWB/@@download/ENCFF504AWB.bam hg19 released control low read depth, borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF483RLD bam alignments ENCSR000FAZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 2 27 ENCFF000YOT, ENCFF643CGH 305866783 ENCODE Processing Pipeline 7a072ef30683126579c37a910624ef3f https://www.encodeproject.org/files/ENCFF483RLD/@@download/ENCFF483RLD.bam GRCh38 released control low read depth, borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF225OQI bigWig signal p-value ENCSR000FAZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 1 ENCFF650MOB, ENCFF929JOF 281965653 ENCODE Processing Pipeline 73c6a74cf917c797cfdba82fd0467cb6 https://www.encodeproject.org/files/ENCFF225OQI/@@download/ENCFF225OQI.bigWig hg19 released control low read depth, borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF540RNZ bigWig signal p-value ENCSR000FAZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 2 ENCFF504AWB, ENCFF650MOB 296886700 ENCODE Processing Pipeline 7f334e367b648185121b834ed4e69b8d https://www.encodeproject.org/files/ENCFF540RNZ/@@download/ENCFF540RNZ.bigWig hg19 released control low read depth, borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF529TRD bigWig signal p-value ENCSR000FAZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 1 ENCFF439NNR, ENCFF767FSP 288308340 ENCODE Processing Pipeline 21d2311076511c44c0cfbfcef4015446 https://www.encodeproject.org/files/ENCFF529TRD/@@download/ENCFF529TRD.bigWig GRCh38 released control low read depth, borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF747JCN bigWig fold change over control ENCSR000FAZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 2 ENCFF483RLD, ENCFF767FSP 139328471 ENCODE Processing Pipeline bb6d030c9d34d96be9769c5cebfb5187 https://www.encodeproject.org/files/ENCFF747JCN/@@download/ENCFF747JCN.bigWig GRCh38 released control low read depth, borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF103SHO bigWig signal p-value ENCSR000FAZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF504AWB, ENCFF650MOB, ENCFF929JOF 295770428 ENCODE Processing Pipeline bf69904f23ec5dbb5b26674e1c19f8e1 https://www.encodeproject.org/files/ENCFF103SHO/@@download/ENCFF103SHO.bigWig hg19 released control low read depth, borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF833DXL bigWig fold change over control ENCSR000FAZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 1 ENCFF650MOB, ENCFF929JOF 142402364 ENCODE Processing Pipeline cdd078612a06ac449dd608e9dea8a958 https://www.encodeproject.org/files/ENCFF833DXL/@@download/ENCFF833DXL.bigWig hg19 released control low read depth, borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF191BRL bigWig signal p-value ENCSR000FAZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 2 ENCFF483RLD, ENCFF767FSP 294193052 ENCODE Processing Pipeline 3e4ed679d9466e907f29638c69fee5ec https://www.encodeproject.org/files/ENCFF191BRL/@@download/ENCFF191BRL.bigWig GRCh38 released control low read depth, borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF478FXQ bigWig fold change over control ENCSR000FAZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 2 ENCFF504AWB, ENCFF650MOB 139924873 ENCODE Processing Pipeline 1f8c305c75f9e97fd0a3ed281932824d https://www.encodeproject.org/files/ENCFF478FXQ/@@download/ENCFF478FXQ.bigWig hg19 released control low read depth, borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF670SAS bigWig signal p-value ENCSR000FAZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF439NNR, ENCFF483RLD, ENCFF767FSP 295264523 ENCODE Processing Pipeline c383a6fab2b8cf11bb798941810c3c99 https://www.encodeproject.org/files/ENCFF670SAS/@@download/ENCFF670SAS.bigWig GRCh38 released control low read depth, borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF137AAX bigWig fold change over control ENCSR000FAZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 1 ENCFF439NNR, ENCFF767FSP 141019794 ENCODE Processing Pipeline b73cc707b92a45f53ceb0d0e84b8af42 https://www.encodeproject.org/files/ENCFF137AAX/@@download/ENCFF137AAX.bigWig GRCh38 released control low read depth, borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF517GFP bed narrowPeak peaks ENCSR000FAZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 1 ENCFF650MOB, ENCFF929JOF 3101096 ENCODE Processing Pipeline e2be7bd7967e11d555813e58abd60384 https://www.encodeproject.org/files/ENCFF517GFP/@@download/ENCFF517GFP.bed.gz hg19 released control low read depth, borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF761YWV bed narrowPeak peaks ENCSR000FAZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF504AWB, ENCFF650MOB, ENCFF929JOF 4870351 ENCODE Processing Pipeline c10e60e9a670d181856d800248875a13 https://www.encodeproject.org/files/ENCFF761YWV/@@download/ENCFF761YWV.bed.gz hg19 released control low read depth, borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF174LWV bigWig fold change over control ENCSR000FAZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF504AWB, ENCFF650MOB, ENCFF929JOF 259324081 ENCODE Processing Pipeline 4cc2c2c5ac10ca1281f8acc09dab6f6a https://www.encodeproject.org/files/ENCFF174LWV/@@download/ENCFF174LWV.bigWig hg19 released control low read depth, borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF028KGK bigWig fold change over control ENCSR000FAZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF439NNR, ENCFF483RLD, ENCFF767FSP 258340584 ENCODE Processing Pipeline b9650cf0eadc228f625e0403e1a97759 https://www.encodeproject.org/files/ENCFF028KGK/@@download/ENCFF028KGK.bigWig GRCh38 released control low read depth, borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF726YHM bed narrowPeak peaks ENCSR000FAZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 2 ENCFF504AWB, ENCFF650MOB 3041994 ENCODE Processing Pipeline 1a28c8a592152dca965a48085b9c329b https://www.encodeproject.org/files/ENCFF726YHM/@@download/ENCFF726YHM.bed.gz hg19 released control low read depth, borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF285ILQ bed narrowPeak peaks ENCSR000FAZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 1 ENCFF439NNR, ENCFF767FSP 3083522 ENCODE Processing Pipeline 6cb236a6472a2e11d1a1b97e285498a4 https://www.encodeproject.org/files/ENCFF285ILQ/@@download/ENCFF285ILQ.bed.gz GRCh38 released control low read depth, borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF758MFJ bed narrowPeak peaks ENCSR000FAZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 2 ENCFF483RLD, ENCFF767FSP 3037268 ENCODE Processing Pipeline 07ec6786ce2da62cd19b240242b92781 https://www.encodeproject.org/files/ENCFF758MFJ/@@download/ENCFF758MFJ.bed.gz GRCh38 released control low read depth, borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF358BNT bigBed narrowPeak peaks ENCSR000FAZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 1 ENCFF517GFP 7141659 ENCODE Processing Pipeline f4d4d86e4c170f475f314c65fc6032cf https://www.encodeproject.org/files/ENCFF358BNT/@@download/ENCFF358BNT.bigBed hg19 released control low read depth, borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF188QKH bigBed narrowPeak peaks ENCSR000FAZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 2 ENCFF726YHM 7344479 ENCODE Processing Pipeline 1887848fea90d05afe820d32f599a175 https://www.encodeproject.org/files/ENCFF188QKH/@@download/ENCFF188QKH.bigBed hg19 released control low read depth, borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF051ILG bed narrowPeak peaks ENCSR000FAZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF439NNR, ENCFF483RLD, ENCFF767FSP 4839291 ENCODE Processing Pipeline b3ef4775e7c0c36edb6a4a2c3c8e4e2d https://www.encodeproject.org/files/ENCFF051ILG/@@download/ENCFF051ILG.bed.gz GRCh38 released control low read depth, borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF984PTF bigBed narrowPeak peaks ENCSR000FAZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF761YWV 10714807 ENCODE Processing Pipeline caa81da5fead4ea3e776bb6edd0d02b8 https://www.encodeproject.org/files/ENCFF984PTF/@@download/ENCFF984PTF.bigBed hg19 released control low read depth, borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF836PBB bed narrowPeak conservative idr thresholded peaks ENCSR000FAZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF001TDO, ENCFF517GFP, ENCFF726YHM, ENCFF761YWV 124991 ENCODE Processing Pipeline 0ef5794ebc84c309d877ac7933d8237d https://www.encodeproject.org/files/ENCFF836PBB/@@download/ENCFF836PBB.bed.gz hg19 released control low read depth, borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF762GVY bigBed narrowPeak peaks ENCSR000FAZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 1 ENCFF285ILQ 7019435 ENCODE Processing Pipeline fe8bdf98418dcbc21f0f29a44ca890a8 https://www.encodeproject.org/files/ENCFF762GVY/@@download/ENCFF762GVY.bigBed GRCh38 released control low read depth, borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF494ZXY bigBed narrowPeak peaks ENCSR000FAZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF051ILG 10689294 ENCODE Processing Pipeline d2660bd0043e640a5e153b14e61bcae8 https://www.encodeproject.org/files/ENCFF494ZXY/@@download/ENCFF494ZXY.bigBed GRCh38 released control low read depth, borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF487JHU bigBed narrowPeak peaks ENCSR000FAZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 2 ENCFF758MFJ 7328957 ENCODE Processing Pipeline d7bfcfc7ff5d0710e4b771ff05e22d4d https://www.encodeproject.org/files/ENCFF487JHU/@@download/ENCFF487JHU.bigBed GRCh38 released control low read depth, borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF851QWV bigBed narrowPeak conservative idr thresholded peaks ENCSR000FAZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF836PBB 276128 ENCODE Processing Pipeline 5d77d59568462e5168c41ed554fe4f36 https://www.encodeproject.org/files/ENCFF851QWV/@@download/ENCFF851QWV.bigBed hg19 released control low read depth, borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF634AYU bed narrowPeak optimal idr thresholded peaks ENCSR000FAZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF001TDO, ENCFF517GFP, ENCFF726YHM, ENCFF761YWV 156795 ENCODE Processing Pipeline 730d1f4239612dda93845a2c03f5db0d https://www.encodeproject.org/files/ENCFF634AYU/@@download/ENCFF634AYU.bed.gz hg19 released control low read depth, borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF047QSF bigBed narrowPeak optimal idr thresholded peaks ENCSR000FAZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF634AYU 322934 ENCODE Processing Pipeline 71acf5e478336c967990644046e3c80b https://www.encodeproject.org/files/ENCFF047QSF/@@download/ENCFF047QSF.bigBed hg19 released control low read depth, borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF371WLD bigBed narrowPeak conservative idr thresholded peaks ENCSR000FAZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF695KNI 277752 ENCODE Processing Pipeline 50c6f7e0aca2c35689e5770a636cb045 https://www.encodeproject.org/files/ENCFF371WLD/@@download/ENCFF371WLD.bigBed GRCh38 released control low read depth, borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF695KNI bed narrowPeak conservative idr thresholded peaks ENCSR000FAZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF051ILG, ENCFF285ILQ, ENCFF419RSJ, ENCFF758MFJ 125693 ENCODE Processing Pipeline 9a50d2ade59b083ac3fe633380293c9a https://www.encodeproject.org/files/ENCFF695KNI/@@download/ENCFF695KNI.bed.gz GRCh38 released control low read depth, borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF970RNZ bigBed narrowPeak optimal idr thresholded peaks ENCSR000FAZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF700TLG 325482 ENCODE Processing Pipeline 98d77e8d4ed0bc942f2848e0a1ffd463 https://www.encodeproject.org/files/ENCFF970RNZ/@@download/ENCFF970RNZ.bigBed GRCh38 released control low read depth, borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF700TLG bed narrowPeak optimal idr thresholded peaks ENCSR000FAZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF051ILG, ENCFF285ILQ, ENCFF419RSJ, ENCFF758MFJ 158337 ENCODE Processing Pipeline ff1b2e4c23fa1e538b57ef5f01112acd https://www.encodeproject.org/files/ENCFF700TLG/@@download/ENCFF700TLG.bed.gz GRCh38 released control low read depth, borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF706KLP fastq reads ENCSR249BHQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF592-human ENCAB438BKV DNA False 2017-05-17 ENCODE 2 1 100 paired-ended 1 ENCFF669OSV 2321655607 Michael Snyder, Stanford d0a47af02c2f9e716a0f495c4866a753 SRA:SRR6212972 https://www.encodeproject.org/files/ENCFF706KLP/@@download/ENCFF706KLP.fastq.gz Illumina HiSeq 4000 /files/ENCFF259GQA/ released mild to moderate bottlenecking, antibody characterized with exemption missing control alignments ENCFF283GNM fastq reads ENCSR249BHQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF592-human ENCAB438BKV DNA False 2017-05-17 ENCODE 1 1 100 paired-ended 1 ENCFF451RCX 2556230925 Michael Snyder, Stanford 3a08a44c91d96590e743c672138bc02f SRA:SRR6212973 https://www.encodeproject.org/files/ENCFF283GNM/@@download/ENCFF283GNM.fastq.gz Illumina HiSeq 4000 /files/ENCFF498JMO/ released mild to moderate bottlenecking, antibody characterized with exemption missing control alignments ENCFF451RCX fastq reads ENCSR249BHQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF592-human ENCAB438BKV DNA False 2017-05-17 ENCODE 1 1 100 paired-ended 2 ENCFF283GNM 3087194587 Michael Snyder, Stanford 26ec00e585df209220407a95c11d33fa SRA:SRR6212973 https://www.encodeproject.org/files/ENCFF451RCX/@@download/ENCFF451RCX.fastq.gz Illumina HiSeq 4000 /files/ENCFF502GTS/ released mild to moderate bottlenecking, antibody characterized with exemption missing control alignments ENCFF669OSV fastq reads ENCSR249BHQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF592-human ENCAB438BKV DNA False 2017-05-17 ENCODE 2 1 100 paired-ended 2 ENCFF706KLP 2858456203 Michael Snyder, Stanford 8dc676b7ab8ffc282f9b63b7d2abcbc3 SRA:SRR6212972 https://www.encodeproject.org/files/ENCFF669OSV/@@download/ENCFF669OSV.fastq.gz Illumina HiSeq 4000 /files/ENCFF837MIV/ released mild to moderate bottlenecking, antibody characterized with exemption missing control alignments ENCFF323QDU bam unfiltered alignments ENCSR249BHQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF592-human ENCAB438BKV DNA False 2017-05-17 ENCODE 2 100 ENCFF643CGH, ENCFF669OSV, ENCFF706KLP 5009516491 ENCODE Processing Pipeline c0694245fd743f8a0bc059b447e25827 https://www.encodeproject.org/files/ENCFF323QDU/@@download/ENCFF323QDU.bam GRCh38 released mild to moderate bottlenecking, antibody characterized with exemption missing control alignments ENCFF720AQH bam unfiltered alignments ENCSR249BHQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF592-human ENCAB438BKV DNA False 2017-05-17 ENCODE 2 100 ENCFF669OSV, ENCFF706KLP, ENCFF807MUK 5003679037 ENCODE Processing Pipeline 5ffe2c72ef18789ec762d6a0b4632146 https://www.encodeproject.org/files/ENCFF720AQH/@@download/ENCFF720AQH.bam hg19 released mild to moderate bottlenecking, antibody characterized with exemption missing control alignments ENCFF170OSU bam unfiltered alignments ENCSR249BHQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF592-human ENCAB438BKV DNA False 2017-05-17 ENCODE 1 100 ENCFF283GNM, ENCFF451RCX, ENCFF807MUK 5397977806 ENCODE Processing Pipeline 856884972977eb97ddc8c3a904303ccc https://www.encodeproject.org/files/ENCFF170OSU/@@download/ENCFF170OSU.bam hg19 released mild to moderate bottlenecking, antibody characterized with exemption missing control alignments ENCFF414QKE bam unfiltered alignments ENCSR249BHQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF592-human ENCAB438BKV DNA False 2017-05-17 ENCODE 1 100 ENCFF283GNM, ENCFF451RCX, ENCFF643CGH 5405308080 ENCODE Processing Pipeline f141b80a30925433a0e291a2c7a60b4d https://www.encodeproject.org/files/ENCFF414QKE/@@download/ENCFF414QKE.bam GRCh38 released mild to moderate bottlenecking, antibody characterized with exemption missing control alignments ENCFF437IVZ bam alignments ENCSR249BHQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF592-human ENCAB438BKV DNA False 2017-05-17 ENCODE 2 100 ENCFF643CGH, ENCFF669OSV, ENCFF706KLP 3897741970 ENCODE Processing Pipeline 849389fdec7085163b49536cbe36f588 https://www.encodeproject.org/files/ENCFF437IVZ/@@download/ENCFF437IVZ.bam GRCh38 released mild to moderate bottlenecking, antibody characterized with exemption missing control alignments ENCFF119ZDI bam alignments ENCSR249BHQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF592-human ENCAB438BKV DNA False 2017-05-17 ENCODE 1 100 ENCFF283GNM, ENCFF451RCX, ENCFF643CGH 4347711953 ENCODE Processing Pipeline 78fe49ad8bf307e258ca20e4dcacef2e https://www.encodeproject.org/files/ENCFF119ZDI/@@download/ENCFF119ZDI.bam GRCh38 released mild to moderate bottlenecking, antibody characterized with exemption missing control alignments ENCFF411OFR bam alignments ENCSR249BHQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF592-human ENCAB438BKV DNA False 2017-05-17 ENCODE 2 100 ENCFF669OSV, ENCFF706KLP, ENCFF807MUK 3896067426 ENCODE Processing Pipeline 79bdc6e4953527be26e267547961263f https://www.encodeproject.org/files/ENCFF411OFR/@@download/ENCFF411OFR.bam hg19 released mild to moderate bottlenecking, antibody characterized with exemption missing control alignments ENCFF155TVA bam alignments ENCSR249BHQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF592-human ENCAB438BKV DNA False 2017-05-17 ENCODE 1 100 ENCFF283GNM, ENCFF451RCX, ENCFF807MUK 4345660446 ENCODE Processing Pipeline c42caf7d595fab6a417ef0c14717fc5c https://www.encodeproject.org/files/ENCFF155TVA/@@download/ENCFF155TVA.bam hg19 released mild to moderate bottlenecking, antibody characterized with exemption missing control alignments ENCFF576ZHM bigWig signal p-value ENCSR249BHQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF592-human ENCAB438BKV DNA False 2017-05-17 ENCODE 2 ENCFF411OFR, ENCFF834TUP 1099906573 ENCODE Processing Pipeline ea8dc0208fa82a7fb29d7b5a1b46ac90 https://www.encodeproject.org/files/ENCFF576ZHM/@@download/ENCFF576ZHM.bigWig hg19 released mild to moderate bottlenecking, antibody characterized with exemption missing control alignments ENCFF664WQO bigWig fold change over control ENCSR249BHQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF592-human ENCAB438BKV DNA False 2017-05-17 ENCODE 2 ENCFF411OFR, ENCFF834TUP 1282199586 ENCODE Processing Pipeline 67e979c57b06ec97bee2986f64e7d047 https://www.encodeproject.org/files/ENCFF664WQO/@@download/ENCFF664WQO.bigWig hg19 released mild to moderate bottlenecking, antibody characterized with exemption missing control alignments ENCFF363AAC bed narrowPeak peaks ENCSR249BHQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF592-human ENCAB438BKV DNA False 2017-05-17 ENCODE 1, 2 ENCFF155TVA, ENCFF160VXC, ENCFF411OFR, ENCFF834TUP 7321973 ENCODE Processing Pipeline 261290cb05031626787a10c961837e83 https://www.encodeproject.org/files/ENCFF363AAC/@@download/ENCFF363AAC.bed.gz hg19 released mild to moderate bottlenecking, antibody characterized with exemption missing control alignments ENCFF953QTR bigBed narrowPeak optimal idr thresholded peaks ENCSR249BHQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF592-human ENCAB438BKV DNA False 2017-05-17 ENCODE 1, 2 ENCFF273TYA 1349490 ENCODE Processing Pipeline 6462f652a62795f1118be1e84418c3f8 https://www.encodeproject.org/files/ENCFF953QTR/@@download/ENCFF953QTR.bigBed hg19 released mild to moderate bottlenecking, antibody characterized with exemption missing control alignments ENCFF900FVZ bigWig signal p-value ENCSR249BHQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF592-human ENCAB438BKV DNA False 2017-05-17 ENCODE 1 ENCFF155TVA, ENCFF160VXC 1342413870 ENCODE Processing Pipeline 15cdccd868f451d630fedec8aeb34735 https://www.encodeproject.org/files/ENCFF900FVZ/@@download/ENCFF900FVZ.bigWig hg19 released mild to moderate bottlenecking, antibody characterized with exemption missing control alignments ENCFF056WPW bigWig signal p-value ENCSR249BHQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF592-human ENCAB438BKV DNA False 2017-05-17 ENCODE 1, 2 ENCFF155TVA, ENCFF160VXC, ENCFF411OFR, ENCFF834TUP 2190739555 ENCODE Processing Pipeline b1c97857448673528760d013c105a254 https://www.encodeproject.org/files/ENCFF056WPW/@@download/ENCFF056WPW.bigWig hg19 released mild to moderate bottlenecking, antibody characterized with exemption missing control alignments ENCFF280MOK bigWig fold change over control ENCSR249BHQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF592-human ENCAB438BKV DNA False 2017-05-17 ENCODE 1, 2 ENCFF155TVA, ENCFF160VXC, ENCFF411OFR, ENCFF834TUP 2261954220 ENCODE Processing Pipeline 4f5b67884ba1e5fa54ec21413fec2c96 https://www.encodeproject.org/files/ENCFF280MOK/@@download/ENCFF280MOK.bigWig hg19 released mild to moderate bottlenecking, antibody characterized with exemption missing control alignments ENCFF537WLH bed narrowPeak peaks ENCSR249BHQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF592-human ENCAB438BKV DNA False 2017-05-17 ENCODE 2 ENCFF411OFR, ENCFF834TUP 7140162 ENCODE Processing Pipeline 7beca13c72ab6a9518c4c80fa839c534 https://www.encodeproject.org/files/ENCFF537WLH/@@download/ENCFF537WLH.bed.gz hg19 released mild to moderate bottlenecking, antibody characterized with exemption missing control alignments ENCFF129SII bigBed narrowPeak peaks ENCSR249BHQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF592-human ENCAB438BKV DNA False 2017-05-17 ENCODE 1, 2 ENCFF363AAC 12720883 ENCODE Processing Pipeline 6d43ffbf45835873cfa282144189d27c https://www.encodeproject.org/files/ENCFF129SII/@@download/ENCFF129SII.bigBed hg19 released mild to moderate bottlenecking, antibody characterized with exemption missing control alignments ENCFF575STA bed narrowPeak conservative idr thresholded peaks ENCSR249BHQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF592-human ENCAB438BKV DNA False 2017-05-17 ENCODE 1, 2 ENCFF001TDO, ENCFF322TVZ, ENCFF363AAC, ENCFF537WLH 565107 ENCODE Processing Pipeline 7658d629e977de0e2c608c86a1920c23 https://www.encodeproject.org/files/ENCFF575STA/@@download/ENCFF575STA.bed.gz hg19 released mild to moderate bottlenecking, antibody characterized with exemption missing control alignments ENCFF632UTP bigBed narrowPeak peaks ENCSR249BHQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF592-human ENCAB438BKV DNA False 2017-05-17 ENCODE 2 ENCFF537WLH 12830812 ENCODE Processing Pipeline 605b983f9921742fab939b1ecf99f1e9 https://www.encodeproject.org/files/ENCFF632UTP/@@download/ENCFF632UTP.bigBed hg19 released mild to moderate bottlenecking, antibody characterized with exemption missing control alignments ENCFF273TYA bed narrowPeak optimal idr thresholded peaks ENCSR249BHQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF592-human ENCAB438BKV DNA False 2017-05-17 ENCODE 1, 2 ENCFF001TDO, ENCFF322TVZ, ENCFF363AAC, ENCFF537WLH 662184 ENCODE Processing Pipeline c8ba92b030fc5472424b29f32f637dc7 https://www.encodeproject.org/files/ENCFF273TYA/@@download/ENCFF273TYA.bed.gz hg19 released mild to moderate bottlenecking, antibody characterized with exemption missing control alignments ENCFF619QIG bigWig fold change over control ENCSR249BHQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF592-human ENCAB438BKV DNA False 2017-05-17 ENCODE 1 ENCFF155TVA, ENCFF160VXC 1347963603 ENCODE Processing Pipeline 2fdbb26594752cef5d17a884a0c6c527 https://www.encodeproject.org/files/ENCFF619QIG/@@download/ENCFF619QIG.bigWig hg19 released mild to moderate bottlenecking, antibody characterized with exemption missing control alignments ENCFF322TVZ bed narrowPeak peaks ENCSR249BHQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF592-human ENCAB438BKV DNA False 2017-05-17 ENCODE 1 ENCFF155TVA, ENCFF160VXC 7093766 ENCODE Processing Pipeline ab63538dc764ed73d698c6004ed4af4a https://www.encodeproject.org/files/ENCFF322TVZ/@@download/ENCFF322TVZ.bed.gz hg19 released mild to moderate bottlenecking, antibody characterized with exemption missing control alignments ENCFF307AUL bigBed narrowPeak peaks ENCSR249BHQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF592-human ENCAB438BKV DNA False 2017-05-17 ENCODE 1 ENCFF322TVZ 12932271 ENCODE Processing Pipeline 620f13521738070a81869da527ce0312 https://www.encodeproject.org/files/ENCFF307AUL/@@download/ENCFF307AUL.bigBed hg19 released mild to moderate bottlenecking, antibody characterized with exemption missing control alignments ENCFF806RFJ bigBed narrowPeak conservative idr thresholded peaks ENCSR249BHQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF592-human ENCAB438BKV DNA False 2017-05-17 ENCODE 1, 2 ENCFF575STA 1182707 ENCODE Processing Pipeline 0cefc8d74752610bf081f945e6a361ea https://www.encodeproject.org/files/ENCFF806RFJ/@@download/ENCFF806RFJ.bigBed hg19 released mild to moderate bottlenecking, antibody characterized with exemption missing control alignments ENCFF828HBX bigWig fold change over control ENCSR249BHQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF592-human ENCAB438BKV DNA False 2017-05-17 ENCODE 1 ENCFF119ZDI 1345018806 ENCODE Processing Pipeline 6f2d8b122344fa70279f9df59149ff99 https://www.encodeproject.org/files/ENCFF828HBX/@@download/ENCFF828HBX.bigWig GRCh38 released mild to moderate bottlenecking, antibody characterized with exemption missing control alignments ENCFF174JJX bigWig signal p-value ENCSR249BHQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF592-human ENCAB438BKV DNA False 2017-05-17 ENCODE 2 ENCFF437IVZ 1319197747 ENCODE Processing Pipeline fb0c1badf4c456223b0ed7d3ce96a8ee https://www.encodeproject.org/files/ENCFF174JJX/@@download/ENCFF174JJX.bigWig GRCh38 released mild to moderate bottlenecking, antibody characterized with exemption missing control alignments ENCFF915IWX bigWig signal p-value ENCSR249BHQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF592-human ENCAB438BKV DNA False 2017-05-17 ENCODE 1, 2 ENCFF119ZDI, ENCFF437IVZ 2137470341 ENCODE Processing Pipeline 0eac11c58f7c7b07420e488fe83b8720 https://www.encodeproject.org/files/ENCFF915IWX/@@download/ENCFF915IWX.bigWig GRCh38 released mild to moderate bottlenecking, antibody characterized with exemption missing control alignments ENCFF907RBW bigWig fold change over control ENCSR249BHQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF592-human ENCAB438BKV DNA False 2017-05-17 ENCODE 2 ENCFF437IVZ 1285224477 ENCODE Processing Pipeline 2aa07544aeec1e0c6ec0341af84de85e https://www.encodeproject.org/files/ENCFF907RBW/@@download/ENCFF907RBW.bigWig GRCh38 released mild to moderate bottlenecking, antibody characterized with exemption missing control alignments ENCFF507SHK bigBed narrowPeak conservative idr thresholded peaks ENCSR249BHQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF592-human ENCAB438BKV DNA False 2017-05-17 ENCODE 1, 2 ENCFF277ZUZ 1186862 ENCODE Processing Pipeline bb27d18bc827932e4e1c80adea4971aa https://www.encodeproject.org/files/ENCFF507SHK/@@download/ENCFF507SHK.bigBed GRCh38 released mild to moderate bottlenecking, antibody characterized with exemption missing control alignments ENCFF277ZUZ bed narrowPeak conservative idr thresholded peaks ENCSR249BHQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF592-human ENCAB438BKV DNA False 2017-05-17 ENCODE 1, 2 ENCFF419RSJ, ENCFF560EPF, ENCFF643KVK, ENCFF667UFY 566076 ENCODE Processing Pipeline 1f41526ccf454592ac24daf2566523ca https://www.encodeproject.org/files/ENCFF277ZUZ/@@download/ENCFF277ZUZ.bed.gz GRCh38 released mild to moderate bottlenecking, antibody characterized with exemption missing control alignments ENCFF164WTL bigWig signal p-value ENCSR249BHQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF592-human ENCAB438BKV DNA False 2017-05-17 ENCODE 1 ENCFF119ZDI 1204633629 ENCODE Processing Pipeline edceb49b4b942e74d520c195e64c1cde https://www.encodeproject.org/files/ENCFF164WTL/@@download/ENCFF164WTL.bigWig GRCh38 released mild to moderate bottlenecking, antibody characterized with exemption missing control alignments ENCFF643KVK bed narrowPeak peaks ENCSR249BHQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF592-human ENCAB438BKV DNA False 2017-05-17 ENCODE 2 ENCFF437IVZ 7144969 ENCODE Processing Pipeline 2714f0cdd850717c1e557c05841baca7 https://www.encodeproject.org/files/ENCFF643KVK/@@download/ENCFF643KVK.bed.gz GRCh38 released mild to moderate bottlenecking, antibody characterized with exemption missing control alignments ENCFF667UFY bed narrowPeak peaks ENCSR249BHQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF592-human ENCAB438BKV DNA False 2017-05-17 ENCODE 1, 2 ENCFF119ZDI, ENCFF437IVZ 7325831 ENCODE Processing Pipeline e662190e6c4fff0ba83c9f6821d340a6 https://www.encodeproject.org/files/ENCFF667UFY/@@download/ENCFF667UFY.bed.gz GRCh38 released mild to moderate bottlenecking, antibody characterized with exemption missing control alignments ENCFF310BGR bigBed narrowPeak peaks ENCSR249BHQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF592-human ENCAB438BKV DNA False 2017-05-17 ENCODE 2 ENCFF643KVK 12839666 ENCODE Processing Pipeline 420153fcc4b31d83e2f5cc4611182a87 https://www.encodeproject.org/files/ENCFF310BGR/@@download/ENCFF310BGR.bigBed GRCh38 released mild to moderate bottlenecking, antibody characterized with exemption missing control alignments ENCFF080LOV bigBed narrowPeak peaks ENCSR249BHQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF592-human ENCAB438BKV DNA False 2017-05-17 ENCODE 1, 2 ENCFF667UFY 12727401 ENCODE Processing Pipeline 15867e4e6107226d35f01bc3874b1ad7 https://www.encodeproject.org/files/ENCFF080LOV/@@download/ENCFF080LOV.bigBed GRCh38 released mild to moderate bottlenecking, antibody characterized with exemption missing control alignments ENCFF972UGK bed narrowPeak optimal idr thresholded peaks ENCSR249BHQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF592-human ENCAB438BKV DNA False 2017-05-17 ENCODE 1, 2 ENCFF419RSJ, ENCFF560EPF, ENCFF643KVK, ENCFF667UFY 677044 ENCODE Processing Pipeline 719a9d4a46c1991103ec3136bde2c0ef https://www.encodeproject.org/files/ENCFF972UGK/@@download/ENCFF972UGK.bed.gz GRCh38 released mild to moderate bottlenecking, antibody characterized with exemption missing control alignments ENCFF645HNZ bigBed narrowPeak optimal idr thresholded peaks ENCSR249BHQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF592-human ENCAB438BKV DNA False 2017-05-17 ENCODE 1, 2 ENCFF972UGK 1374021 ENCODE Processing Pipeline 054141fdb42692a5974573ded8c0a5cd https://www.encodeproject.org/files/ENCFF645HNZ/@@download/ENCFF645HNZ.bigBed GRCh38 released mild to moderate bottlenecking, antibody characterized with exemption missing control alignments ENCFF987EAL bigWig fold change over control ENCSR249BHQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF592-human ENCAB438BKV DNA False 2017-05-17 ENCODE 1, 2 ENCFF119ZDI, ENCFF437IVZ 2293788539 ENCODE Processing Pipeline d33da4e64e3bd4831c4115fdc05cd20b https://www.encodeproject.org/files/ENCFF987EAL/@@download/ENCFF987EAL.bigWig GRCh38 released mild to moderate bottlenecking, antibody characterized with exemption missing control alignments ENCFF560EPF bed narrowPeak peaks ENCSR249BHQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF592-human ENCAB438BKV DNA False 2017-05-17 ENCODE 1 ENCFF119ZDI 7097761 ENCODE Processing Pipeline 954d1a3724e8b484b33be1b93c69c9b9 https://www.encodeproject.org/files/ENCFF560EPF/@@download/ENCFF560EPF.bed.gz GRCh38 released mild to moderate bottlenecking, antibody characterized with exemption missing control alignments ENCFF407VYA bigBed narrowPeak peaks ENCSR249BHQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF592-human ENCAB438BKV DNA False 2017-05-17 ENCODE 1 ENCFF560EPF 12952126 ENCODE Processing Pipeline c6a0594bfa6648e24c84ea576d93853e https://www.encodeproject.org/files/ENCFF407VYA/@@download/ENCFF407VYA.bigBed GRCh38 released mild to moderate bottlenecking, antibody characterized with exemption missing control alignments ENCFF578UQO bam unfiltered alignments ENCSR613NUC ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARNT-human ENCAB608UKB DNA False 2016-12-19 ENCODE 1 100 ENCFF446XHP, ENCFF546YEQ, ENCFF807MUK 6627034754 ENCODE Processing Pipeline e4b7782202acde856d1bfb31673d0158 https://www.encodeproject.org/files/ENCFF578UQO/@@download/ENCFF578UQO.bam hg19 released missing control alignments ENCFF856TCB bam unfiltered alignments ENCSR613NUC ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARNT-human ENCAB608UKB DNA False 2016-12-19 ENCODE 2 100 ENCFF382GYA, ENCFF807MUK, ENCFF841ZHV 5225824840 ENCODE Processing Pipeline e6415c680cb772fdfddf5fa9b32536ae https://www.encodeproject.org/files/ENCFF856TCB/@@download/ENCFF856TCB.bam hg19 released missing control alignments ENCFF546YEQ fastq reads ENCSR613NUC ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARNT-human ENCAB608UKB DNA False 2016-12-19 ENCODE 1 1 100 paired-ended 1 ENCFF446XHP 3046050348 Michael Snyder, Stanford 01134128bef3f8d95d855971de0ae5b8 SRA:SRR6213127 https://www.encodeproject.org/files/ENCFF546YEQ/@@download/ENCFF546YEQ.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFF/ released missing control alignments ENCFF382GYA fastq reads ENCSR613NUC ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARNT-human ENCAB608UKB DNA False 2016-12-19 ENCODE 2 1 100 paired-ended 2 ENCFF841ZHV 2443414899 Michael Snyder, Stanford 1b35a2dd374036a977f066b49ff2d05e SRA:SRR6213126 https://www.encodeproject.org/files/ENCFF382GYA/@@download/ENCFF382GYA.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFA/ released missing control alignments ENCFF446XHP fastq reads ENCSR613NUC ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARNT-human ENCAB608UKB DNA False 2016-12-19 ENCODE 1 1 100 paired-ended 2 ENCFF546YEQ 3137802665 Michael Snyder, Stanford d624af74e703a428301c3858d8ec94a2 SRA:SRR6213127 https://www.encodeproject.org/files/ENCFF446XHP/@@download/ENCFF446XHP.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFH/ released missing control alignments ENCFF841ZHV fastq reads ENCSR613NUC ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARNT-human ENCAB608UKB DNA False 2016-12-19 ENCODE 2 1 100 paired-ended 1 ENCFF382GYA 2388641303 Michael Snyder, Stanford 7e62c17ccb93fb8191d98c757913b5d4 SRA:SRR6213126 https://www.encodeproject.org/files/ENCFF841ZHV/@@download/ENCFF841ZHV.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFD/ released missing control alignments ENCFF948XRU bam alignments ENCSR613NUC ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARNT-human ENCAB608UKB DNA False 2016-12-19 ENCODE 1 100 ENCFF446XHP, ENCFF546YEQ, ENCFF807MUK 5337272684 ENCODE Processing Pipeline ab762f3901a29161882b66987fc05fbe https://www.encodeproject.org/files/ENCFF948XRU/@@download/ENCFF948XRU.bam hg19 released missing control alignments ENCFF921BVG bam alignments ENCSR613NUC ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARNT-human ENCAB608UKB DNA False 2016-12-19 ENCODE 2 100 ENCFF382GYA, ENCFF807MUK, ENCFF841ZHV 4237822844 ENCODE Processing Pipeline e826691c62ce1915a44f010746335089 https://www.encodeproject.org/files/ENCFF921BVG/@@download/ENCFF921BVG.bam hg19 released missing control alignments ENCFF944EOP bigWig signal p-value ENCSR613NUC ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARNT-human ENCAB608UKB DNA False 2016-12-19 ENCODE 2 ENCFF051LWI, ENCFF921BVG 1083853720 ENCODE Processing Pipeline 53b60c295b5fa53fa293a4301125c65a https://www.encodeproject.org/files/ENCFF944EOP/@@download/ENCFF944EOP.bigWig hg19 released missing control alignments ENCFF528HUS bigWig signal p-value ENCSR613NUC ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARNT-human ENCAB608UKB DNA False 2016-12-19 ENCODE 1 ENCFF581ZJL, ENCFF948XRU 1364350916 ENCODE Processing Pipeline 005c4d81c88311488bca8cdcd3445e47 https://www.encodeproject.org/files/ENCFF528HUS/@@download/ENCFF528HUS.bigWig hg19 released missing control alignments ENCFF943YRH bigWig fold change over control ENCSR613NUC ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARNT-human ENCAB608UKB DNA False 2016-12-19 ENCODE 1 ENCFF581ZJL, ENCFF948XRU 1335812762 ENCODE Processing Pipeline 9062ea607a0b567685ba15dec8c2750b https://www.encodeproject.org/files/ENCFF943YRH/@@download/ENCFF943YRH.bigWig hg19 released missing control alignments ENCFF359KGI bigWig fold change over control ENCSR613NUC ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARNT-human ENCAB608UKB DNA False 2016-12-19 ENCODE 2 ENCFF051LWI, ENCFF921BVG 1115990581 ENCODE Processing Pipeline 12d6da1c9e9de8858b9f5c8e9b7cf601 https://www.encodeproject.org/files/ENCFF359KGI/@@download/ENCFF359KGI.bigWig hg19 released missing control alignments ENCFF990IZY bam unfiltered alignments ENCSR613NUC ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARNT-human ENCAB608UKB DNA False 2016-12-19 ENCODE 1 100 ENCFF446XHP, ENCFF546YEQ, ENCFF643CGH 6631900105 ENCODE Processing Pipeline 9ac297fa9520c124a9444d544e33bb16 https://www.encodeproject.org/files/ENCFF990IZY/@@download/ENCFF990IZY.bam GRCh38 released missing control alignments ENCFF986DNW bam unfiltered alignments ENCSR613NUC ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARNT-human ENCAB608UKB DNA False 2016-12-19 ENCODE 2 100 ENCFF382GYA, ENCFF643CGH, ENCFF841ZHV 5230779288 ENCODE Processing Pipeline 7a1d234cac572c8aba85f54c1f9fb89c https://www.encodeproject.org/files/ENCFF986DNW/@@download/ENCFF986DNW.bam GRCh38 released missing control alignments ENCFF258DFY bam alignments ENCSR613NUC ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARNT-human ENCAB608UKB DNA False 2016-12-19 ENCODE 2 100 ENCFF382GYA, ENCFF643CGH, ENCFF841ZHV 4239575023 ENCODE Processing Pipeline ac07e8792229a80001cdda9f034676c4 https://www.encodeproject.org/files/ENCFF258DFY/@@download/ENCFF258DFY.bam GRCh38 released missing control alignments ENCFF490XTX bam alignments ENCSR613NUC ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARNT-human ENCAB608UKB DNA False 2016-12-19 ENCODE 1 100 ENCFF446XHP, ENCFF546YEQ, ENCFF643CGH 5340524575 ENCODE Processing Pipeline 25811220501de9f020b6350c0a86c669 https://www.encodeproject.org/files/ENCFF490XTX/@@download/ENCFF490XTX.bam GRCh38 released missing control alignments ENCFF724NGQ bigWig signal p-value ENCSR613NUC ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARNT-human ENCAB608UKB DNA False 2016-12-19 ENCODE 1 ENCFF490XTX 1143813930 ENCODE Processing Pipeline 7e3eb48613696919723a27760f4aa5c4 https://www.encodeproject.org/files/ENCFF724NGQ/@@download/ENCFF724NGQ.bigWig GRCh38 released missing control alignments ENCFF843WPS bigWig signal p-value ENCSR613NUC ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARNT-human ENCAB608UKB DNA False 2016-12-19 ENCODE 2 ENCFF258DFY 1028140308 ENCODE Processing Pipeline d8faa272b65b2bd361fa34c496c0c13d https://www.encodeproject.org/files/ENCFF843WPS/@@download/ENCFF843WPS.bigWig GRCh38 released missing control alignments ENCFF709FQR bigWig signal p-value ENCSR613NUC ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARNT-human ENCAB608UKB DNA False 2016-12-19 ENCODE 1, 2 ENCFF258DFY, ENCFF490XTX 1862214772 ENCODE Processing Pipeline db2d8c143a8ad1d289fe0e7dd28868a4 https://www.encodeproject.org/files/ENCFF709FQR/@@download/ENCFF709FQR.bigWig GRCh38 released missing control alignments ENCFF865NGU bigWig fold change over control ENCSR613NUC ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARNT-human ENCAB608UKB DNA False 2016-12-19 ENCODE 1 ENCFF490XTX 1358825204 ENCODE Processing Pipeline 0b2fe26c3fbe0e4de299a82de34ec975 https://www.encodeproject.org/files/ENCFF865NGU/@@download/ENCFF865NGU.bigWig GRCh38 released missing control alignments ENCFF198HVQ bigWig fold change over control ENCSR613NUC ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARNT-human ENCAB608UKB DNA False 2016-12-19 ENCODE 2 ENCFF258DFY 1132761859 ENCODE Processing Pipeline a992d5dc6649bb55069f45eaaba74060 https://www.encodeproject.org/files/ENCFF198HVQ/@@download/ENCFF198HVQ.bigWig GRCh38 released missing control alignments ENCFF578UME bigWig fold change over control ENCSR613NUC ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARNT-human ENCAB608UKB DNA False 2016-12-19 ENCODE 1, 2 ENCFF258DFY, ENCFF490XTX 2204382834 ENCODE Processing Pipeline 108fab368e9782a064b3436e1c869e50 https://www.encodeproject.org/files/ENCFF578UME/@@download/ENCFF578UME.bigWig GRCh38 released missing control alignments ENCFF532RNU bed narrowPeak peaks ENCSR613NUC ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARNT-human ENCAB608UKB DNA False 2016-12-19 ENCODE 1 ENCFF490XTX 7108405 ENCODE Processing Pipeline d562ca45bb58dc624a64faa51f0bd61f https://www.encodeproject.org/files/ENCFF532RNU/@@download/ENCFF532RNU.bed.gz GRCh38 released missing control alignments ENCFF365OEO bed narrowPeak peaks ENCSR613NUC ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARNT-human ENCAB608UKB DNA False 2016-12-19 ENCODE 2 ENCFF258DFY 6680109 ENCODE Processing Pipeline 436eeca6ef723befcb0af3718861549c https://www.encodeproject.org/files/ENCFF365OEO/@@download/ENCFF365OEO.bed.gz GRCh38 released missing control alignments ENCFF711LIH bed narrowPeak peaks ENCSR613NUC ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARNT-human ENCAB608UKB DNA False 2016-12-19 ENCODE 1, 2 ENCFF258DFY, ENCFF490XTX 7266016 ENCODE Processing Pipeline 78e8152816e1e52dc89aab67c38072a7 https://www.encodeproject.org/files/ENCFF711LIH/@@download/ENCFF711LIH.bed.gz GRCh38 released missing control alignments ENCFF808ZQB bigBed narrowPeak peaks ENCSR613NUC ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARNT-human ENCAB608UKB DNA False 2016-12-19 ENCODE 1 ENCFF532RNU 12855465 ENCODE Processing Pipeline 2997a3aeecd93b7c6b3031a7a8b7a701 https://www.encodeproject.org/files/ENCFF808ZQB/@@download/ENCFF808ZQB.bigBed GRCh38 released missing control alignments ENCFF891BHR bigBed narrowPeak peaks ENCSR613NUC ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARNT-human ENCAB608UKB DNA False 2016-12-19 ENCODE 2 ENCFF365OEO 13236056 ENCODE Processing Pipeline c08fd758241682c332eafab012aba9b0 https://www.encodeproject.org/files/ENCFF891BHR/@@download/ENCFF891BHR.bigBed GRCh38 released missing control alignments ENCFF911MBA bigBed narrowPeak peaks ENCSR613NUC ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARNT-human ENCAB608UKB DNA False 2016-12-19 ENCODE 1, 2 ENCFF711LIH 12789640 ENCODE Processing Pipeline 954052074b571dd0031ac28173af2d0b https://www.encodeproject.org/files/ENCFF911MBA/@@download/ENCFF911MBA.bigBed GRCh38 released missing control alignments ENCFF446YER bed narrowPeak conservative idr thresholded peaks ENCSR613NUC ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARNT-human ENCAB608UKB DNA False 2016-12-19 ENCODE 1, 2 ENCFF365OEO, ENCFF419RSJ, ENCFF532RNU, ENCFF711LIH 222312 ENCODE Processing Pipeline 255d56b1e5d669c149171265fdfbe76f https://www.encodeproject.org/files/ENCFF446YER/@@download/ENCFF446YER.bed.gz GRCh38 released missing control alignments ENCFF352LFP bigBed narrowPeak conservative idr thresholded peaks ENCSR613NUC ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARNT-human ENCAB608UKB DNA False 2016-12-19 ENCODE 1, 2 ENCFF446YER 493718 ENCODE Processing Pipeline e1b86641f3c4aebfdaa893ba72a19689 https://www.encodeproject.org/files/ENCFF352LFP/@@download/ENCFF352LFP.bigBed GRCh38 released missing control alignments ENCFF445KQZ bigBed narrowPeak optimal idr thresholded peaks ENCSR613NUC ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARNT-human ENCAB608UKB DNA False 2016-12-19 ENCODE 1, 2 ENCFF655EFA 625291 ENCODE Processing Pipeline a233e02c4f532167c5277d7790ea995e https://www.encodeproject.org/files/ENCFF445KQZ/@@download/ENCFF445KQZ.bigBed GRCh38 released missing control alignments ENCFF655EFA bed narrowPeak optimal idr thresholded peaks ENCSR613NUC ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARNT-human ENCAB608UKB DNA False 2016-12-19 ENCODE 1, 2 ENCFF365OEO, ENCFF419RSJ, ENCFF532RNU, ENCFF711LIH 304147 ENCODE Processing Pipeline e59659a28b1920affc1dc60214f358c4 https://www.encodeproject.org/files/ENCFF655EFA/@@download/ENCFF655EFA.bed.gz GRCh38 released missing control alignments ENCFF107LZF bigBed narrowPeak optimal idr thresholded peaks ENCSR613NUC ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARNT-human ENCAB608UKB DNA False 2016-12-19 ENCODE 1, 2 ENCFF471ZTZ 632039 ENCODE Processing Pipeline 60084aeabb2ab89c7266717ad10073f4 https://www.encodeproject.org/files/ENCFF107LZF/@@download/ENCFF107LZF.bigBed hg19 released missing control alignments ENCFF738ADF bigWig fold change over control ENCSR613NUC ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARNT-human ENCAB608UKB DNA False 2016-12-19 ENCODE 1, 2 ENCFF051LWI, ENCFF581ZJL, ENCFF921BVG, ENCFF948XRU 2200729849 ENCODE Processing Pipeline 7f3f5ed93ccd6bb5f6150f848a62b9be https://www.encodeproject.org/files/ENCFF738ADF/@@download/ENCFF738ADF.bigWig hg19 released missing control alignments ENCFF848FSH bed narrowPeak peaks ENCSR613NUC ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARNT-human ENCAB608UKB DNA False 2016-12-19 ENCODE 1, 2 ENCFF051LWI, ENCFF581ZJL, ENCFF921BVG, ENCFF948XRU 7260496 ENCODE Processing Pipeline 6ed6bde5b6fce4621dd2e4bb9a8bc089 https://www.encodeproject.org/files/ENCFF848FSH/@@download/ENCFF848FSH.bed.gz hg19 released missing control alignments ENCFF180YTD bigBed narrowPeak peaks ENCSR613NUC ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARNT-human ENCAB608UKB DNA False 2016-12-19 ENCODE 1 ENCFF505URD 12849600 ENCODE Processing Pipeline 27be650cbb9d5632093ca319edacea83 https://www.encodeproject.org/files/ENCFF180YTD/@@download/ENCFF180YTD.bigBed hg19 released missing control alignments ENCFF032MDN bed narrowPeak conservative idr thresholded peaks ENCSR613NUC ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARNT-human ENCAB608UKB DNA False 2016-12-19 ENCODE 1, 2 ENCFF001TDO, ENCFF505URD, ENCFF829KFC, ENCFF848FSH 219423 ENCODE Processing Pipeline c0ba57087eddfc09918d0b562f256a94 https://www.encodeproject.org/files/ENCFF032MDN/@@download/ENCFF032MDN.bed.gz hg19 released missing control alignments ENCFF829KFC bed narrowPeak peaks ENCSR613NUC ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARNT-human ENCAB608UKB DNA False 2016-12-19 ENCODE 2 ENCFF051LWI, ENCFF921BVG 6680008 ENCODE Processing Pipeline 9916a25b6b7c1363fbfb629df670f9c3 https://www.encodeproject.org/files/ENCFF829KFC/@@download/ENCFF829KFC.bed.gz hg19 released missing control alignments ENCFF244TTR bigBed narrowPeak peaks ENCSR613NUC ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARNT-human ENCAB608UKB DNA False 2016-12-19 ENCODE 1, 2 ENCFF848FSH 12778126 ENCODE Processing Pipeline 9e180d2e29229adb27ccc268758c81cf https://www.encodeproject.org/files/ENCFF244TTR/@@download/ENCFF244TTR.bigBed hg19 released missing control alignments ENCFF038XDZ bigBed narrowPeak conservative idr thresholded peaks ENCSR613NUC ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARNT-human ENCAB608UKB DNA False 2016-12-19 ENCODE 1, 2 ENCFF032MDN 487816 ENCODE Processing Pipeline d6aa831a55f7b641e49f610e37b3b8d8 https://www.encodeproject.org/files/ENCFF038XDZ/@@download/ENCFF038XDZ.bigBed hg19 released missing control alignments ENCFF942IXW bigBed narrowPeak peaks ENCSR613NUC ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARNT-human ENCAB608UKB DNA False 2016-12-19 ENCODE 2 ENCFF829KFC 13226433 ENCODE Processing Pipeline 38a5fb7d41281809c061655e22e00ecd https://www.encodeproject.org/files/ENCFF942IXW/@@download/ENCFF942IXW.bigBed hg19 released missing control alignments ENCFF471ZTZ bed narrowPeak optimal idr thresholded peaks ENCSR613NUC ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARNT-human ENCAB608UKB DNA False 2016-12-19 ENCODE 1, 2 ENCFF001TDO, ENCFF505URD, ENCFF829KFC, ENCFF848FSH 309156 ENCODE Processing Pipeline 720a3ea4fe1bb47e81c212a2969a67f6 https://www.encodeproject.org/files/ENCFF471ZTZ/@@download/ENCFF471ZTZ.bed.gz hg19 released missing control alignments ENCFF852PAQ bigWig signal p-value ENCSR613NUC ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARNT-human ENCAB608UKB DNA False 2016-12-19 ENCODE 1, 2 ENCFF051LWI, ENCFF581ZJL, ENCFF921BVG, ENCFF948XRU 1762678779 ENCODE Processing Pipeline c9bd48386ac6a0a8745c93222e594915 https://www.encodeproject.org/files/ENCFF852PAQ/@@download/ENCFF852PAQ.bigWig hg19 released missing control alignments ENCFF505URD bed narrowPeak peaks ENCSR613NUC ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARNT-human ENCAB608UKB DNA False 2016-12-19 ENCODE 1 ENCFF581ZJL, ENCFF948XRU 7107880 ENCODE Processing Pipeline daaf9e7a697b0d64edcb01c4a0f21f2a https://www.encodeproject.org/files/ENCFF505URD/@@download/ENCFF505URD.bed.gz hg19 released missing control alignments ENCFF139SOU fastq reads ENCSR807BGP ChIP-seq EFO:0002067 K562 cell line Homo sapiens MTA1-human ENCAB000BCN DNA False 2017-05-17 ENCODE 1 1 100 paired-ended 2 ENCFF434PLO 2170911901 Michael Snyder, Stanford 7b6856632dcd180d54101839336bbee0 SRA:SRR6213940 https://www.encodeproject.org/files/ENCFF139SOU/@@download/ENCFF139SOU.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFH/ released borderline replicate concordance ENCFF032QDB fastq reads ENCSR807BGP ChIP-seq EFO:0002067 K562 cell line Homo sapiens MTA1-human ENCAB000BCN DNA False 2017-05-17 ENCODE 2 1 100 paired-ended 2 ENCFF638OLJ 2608317327 Michael Snyder, Stanford 32d1033fa579866c98a94b92d79fc208 SRA:SRR6213941 https://www.encodeproject.org/files/ENCFF032QDB/@@download/ENCFF032QDB.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFA/ released borderline replicate concordance ENCFF638OLJ fastq reads ENCSR807BGP ChIP-seq EFO:0002067 K562 cell line Homo sapiens MTA1-human ENCAB000BCN DNA False 2017-05-17 ENCODE 2 1 100 paired-ended 1 ENCFF032QDB 2574026618 Michael Snyder, Stanford bc7f3b676848e914402c6492fe8dd875 SRA:SRR6213941 https://www.encodeproject.org/files/ENCFF638OLJ/@@download/ENCFF638OLJ.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFD/ released borderline replicate concordance ENCFF434PLO fastq reads ENCSR807BGP ChIP-seq EFO:0002067 K562 cell line Homo sapiens MTA1-human ENCAB000BCN DNA False 2017-05-17 ENCODE 1 1 100 paired-ended 1 ENCFF139SOU 2142427816 Michael Snyder, Stanford 2b72346fc571ef83c3850647bb155e23 SRA:SRR6213940 https://www.encodeproject.org/files/ENCFF434PLO/@@download/ENCFF434PLO.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFF/ released borderline replicate concordance ENCFF956JYJ bam unfiltered alignments ENCSR807BGP ChIP-seq EFO:0002067 K562 cell line Homo sapiens MTA1-human ENCAB000BCN DNA False 2017-05-17 ENCODE 1 100 ENCFF139SOU, ENCFF434PLO, ENCFF807MUK 4673528462 ENCODE Processing Pipeline 2d67ad6e57cc58c369c2b185e20de82c https://www.encodeproject.org/files/ENCFF956JYJ/@@download/ENCFF956JYJ.bam hg19 released borderline replicate concordance ENCFF412LRS bam alignments ENCSR807BGP ChIP-seq EFO:0002067 K562 cell line Homo sapiens MTA1-human ENCAB000BCN DNA False 2017-05-17 ENCODE 1 100 ENCFF139SOU, ENCFF434PLO, ENCFF807MUK 3839630593 ENCODE Processing Pipeline 4f262aaa67fe26bfe8f7bba66dcea831 https://www.encodeproject.org/files/ENCFF412LRS/@@download/ENCFF412LRS.bam hg19 released borderline replicate concordance ENCFF852HQJ bam unfiltered alignments ENCSR807BGP ChIP-seq EFO:0002067 K562 cell line Homo sapiens MTA1-human ENCAB000BCN DNA False 2017-05-17 ENCODE 1 100 ENCFF139SOU, ENCFF434PLO, ENCFF643CGH 4677060665 ENCODE Processing Pipeline 961d5fca7d1912cbf8c8463379082477 https://www.encodeproject.org/files/ENCFF852HQJ/@@download/ENCFF852HQJ.bam GRCh38 released borderline replicate concordance ENCFF241GJI bam alignments ENCSR807BGP ChIP-seq EFO:0002067 K562 cell line Homo sapiens MTA1-human ENCAB000BCN DNA False 2017-05-17 ENCODE 1 100 ENCFF139SOU, ENCFF434PLO, ENCFF643CGH 3841999035 ENCODE Processing Pipeline e3660e1d174cbb602701af35f3443c2e https://www.encodeproject.org/files/ENCFF241GJI/@@download/ENCFF241GJI.bam GRCh38 released borderline replicate concordance ENCFF950LGW bam alignments ENCSR807BGP ChIP-seq EFO:0002067 K562 cell line Homo sapiens MTA1-human ENCAB000BCN DNA False 2017-05-17 ENCODE 2 100 ENCFF032QDB, ENCFF638OLJ, ENCFF807MUK 4656975559 ENCODE Processing Pipeline 5aa2a4f1f5ee766f3690a1c7f3e882b1 https://www.encodeproject.org/files/ENCFF950LGW/@@download/ENCFF950LGW.bam hg19 released borderline replicate concordance ENCFF352HJD bam unfiltered alignments ENCSR807BGP ChIP-seq EFO:0002067 K562 cell line Homo sapiens MTA1-human ENCAB000BCN DNA False 2017-05-17 ENCODE 2 100 ENCFF032QDB, ENCFF638OLJ, ENCFF807MUK 5615875744 ENCODE Processing Pipeline 29f8f259e65c83f8a10ecc701d7bc32d https://www.encodeproject.org/files/ENCFF352HJD/@@download/ENCFF352HJD.bam hg19 released borderline replicate concordance ENCFF838ZKA bam unfiltered alignments ENCSR807BGP ChIP-seq EFO:0002067 K562 cell line Homo sapiens MTA1-human ENCAB000BCN DNA False 2017-05-17 ENCODE 2 100 ENCFF032QDB, ENCFF638OLJ, ENCFF643CGH 5621754365 ENCODE Processing Pipeline a869133452ddbbc46001143581c91ef9 https://www.encodeproject.org/files/ENCFF838ZKA/@@download/ENCFF838ZKA.bam GRCh38 released borderline replicate concordance ENCFF647FZE bam alignments ENCSR807BGP ChIP-seq EFO:0002067 K562 cell line Homo sapiens MTA1-human ENCAB000BCN DNA False 2017-05-17 ENCODE 2 100 ENCFF032QDB, ENCFF638OLJ, ENCFF643CGH 4660087292 ENCODE Processing Pipeline e8cff35f5db71542f07f15b8cb5119fd https://www.encodeproject.org/files/ENCFF647FZE/@@download/ENCFF647FZE.bam GRCh38 released borderline replicate concordance ENCFF985JCJ bigWig signal p-value ENCSR807BGP ChIP-seq EFO:0002067 K562 cell line Homo sapiens MTA1-human ENCAB000BCN DNA False 2017-05-17 ENCODE 1 ENCFF241GJI, ENCFF910IKB 1004292431 ENCODE Processing Pipeline 994a4e48338a341bf38b2755dd4b3fc5 https://www.encodeproject.org/files/ENCFF985JCJ/@@download/ENCFF985JCJ.bigWig GRCh38 released borderline replicate concordance ENCFF609KNT bigWig fold change over control ENCSR807BGP ChIP-seq EFO:0002067 K562 cell line Homo sapiens MTA1-human ENCAB000BCN DNA False 2017-05-17 ENCODE 1 ENCFF241GJI, ENCFF910IKB 1085917103 ENCODE Processing Pipeline 9d39d5a0694ea6051dffe5eeb299e9d5 https://www.encodeproject.org/files/ENCFF609KNT/@@download/ENCFF609KNT.bigWig GRCh38 released borderline replicate concordance ENCFF183BBE bigWig signal p-value ENCSR807BGP ChIP-seq EFO:0002067 K562 cell line Homo sapiens MTA1-human ENCAB000BCN DNA False 2017-05-17 ENCODE 2 ENCFF227IZS, ENCFF647FZE 1113946949 ENCODE Processing Pipeline d6f8ef0052b7f9c519bf18411fe4ad18 https://www.encodeproject.org/files/ENCFF183BBE/@@download/ENCFF183BBE.bigWig GRCh38 released borderline replicate concordance ENCFF433GGH bigWig signal p-value ENCSR807BGP ChIP-seq EFO:0002067 K562 cell line Homo sapiens MTA1-human ENCAB000BCN DNA False 2017-05-17 ENCODE 1, 2 ENCFF227IZS, ENCFF241GJI, ENCFF647FZE, ENCFF910IKB 2127378943 ENCODE Processing Pipeline 8681b35a4ee017bb15d5a4dda24f7a7e https://www.encodeproject.org/files/ENCFF433GGH/@@download/ENCFF433GGH.bigWig GRCh38 released borderline replicate concordance ENCFF159XBD bigWig fold change over control ENCSR807BGP ChIP-seq EFO:0002067 K562 cell line Homo sapiens MTA1-human ENCAB000BCN DNA False 2017-05-17 ENCODE 2 ENCFF227IZS, ENCFF647FZE 1149914164 ENCODE Processing Pipeline 81c22ab841d1961a74bf88efeb96d2d6 https://www.encodeproject.org/files/ENCFF159XBD/@@download/ENCFF159XBD.bigWig GRCh38 released borderline replicate concordance ENCFF132APO bigWig fold change over control ENCSR807BGP ChIP-seq EFO:0002067 K562 cell line Homo sapiens MTA1-human ENCAB000BCN DNA False 2017-05-17 ENCODE 1, 2 ENCFF227IZS, ENCFF241GJI, ENCFF647FZE, ENCFF910IKB 2086641705 ENCODE Processing Pipeline 427e8ece2ce4f28a5c7dc7620b27ea80 https://www.encodeproject.org/files/ENCFF132APO/@@download/ENCFF132APO.bigWig GRCh38 released borderline replicate concordance ENCFF842YAM bed narrowPeak peaks ENCSR807BGP ChIP-seq EFO:0002067 K562 cell line Homo sapiens MTA1-human ENCAB000BCN DNA False 2017-05-17 ENCODE 1 ENCFF241GJI, ENCFF910IKB 6959549 ENCODE Processing Pipeline 9027af2dd3fe4d3989281e196936e643 https://www.encodeproject.org/files/ENCFF842YAM/@@download/ENCFF842YAM.bed.gz GRCh38 released borderline replicate concordance ENCFF411DEF bed narrowPeak peaks ENCSR807BGP ChIP-seq EFO:0002067 K562 cell line Homo sapiens MTA1-human ENCAB000BCN DNA False 2017-05-17 ENCODE 2 ENCFF227IZS, ENCFF647FZE 6715667 ENCODE Processing Pipeline 8bba1fe00b543f5a7d80e5f2d0c513bc https://www.encodeproject.org/files/ENCFF411DEF/@@download/ENCFF411DEF.bed.gz GRCh38 released borderline replicate concordance ENCFF362MSS bigBed narrowPeak conservative idr thresholded peaks ENCSR807BGP ChIP-seq EFO:0002067 K562 cell line Homo sapiens MTA1-human ENCAB000BCN DNA False 2017-05-17 ENCODE 1, 2 ENCFF843MEU 481301 ENCODE Processing Pipeline 9ffddc589a5924c4400ed0fdfbff1e6f https://www.encodeproject.org/files/ENCFF362MSS/@@download/ENCFF362MSS.bigBed GRCh38 released borderline replicate concordance ENCFF161QXX bigBed narrowPeak optimal idr thresholded peaks ENCSR807BGP ChIP-seq EFO:0002067 K562 cell line Homo sapiens MTA1-human ENCAB000BCN DNA False 2017-05-17 ENCODE 1, 2 ENCFF801KEW 699952 ENCODE Processing Pipeline 19d4147bfae6e833b7a9cf1ed214a16c https://www.encodeproject.org/files/ENCFF161QXX/@@download/ENCFF161QXX.bigBed GRCh38 released borderline replicate concordance ENCFF889ODV bed narrowPeak peaks ENCSR807BGP ChIP-seq EFO:0002067 K562 cell line Homo sapiens MTA1-human ENCAB000BCN DNA False 2017-05-17 ENCODE 1, 2 ENCFF227IZS, ENCFF241GJI, ENCFF647FZE, ENCFF910IKB 7252384 ENCODE Processing Pipeline fcf4c685721726eb4482913caf594c51 https://www.encodeproject.org/files/ENCFF889ODV/@@download/ENCFF889ODV.bed.gz GRCh38 released borderline replicate concordance ENCFF334TNK bigBed narrowPeak peaks ENCSR807BGP ChIP-seq EFO:0002067 K562 cell line Homo sapiens MTA1-human ENCAB000BCN DNA False 2017-05-17 ENCODE 1, 2 ENCFF002ZRH 12981046 ENCODE Processing Pipeline 9113b8cff56fc10bb333f2f8bf93ca82 https://www.encodeproject.org/files/ENCFF334TNK/@@download/ENCFF334TNK.bigBed GRCh38 released borderline replicate concordance ENCFF801KEW bed narrowPeak optimal idr thresholded peaks ENCSR807BGP ChIP-seq EFO:0002067 K562 cell line Homo sapiens MTA1-human ENCAB000BCN DNA False 2017-05-17 ENCODE 1, 2 ENCFF002ZRH, ENCFF411DEF, ENCFF419RSJ, ENCFF724MJA 335713 ENCODE Processing Pipeline 2b67efa03e5a670d42fcb599b73d4122 https://www.encodeproject.org/files/ENCFF801KEW/@@download/ENCFF801KEW.bed.gz GRCh38 released borderline replicate concordance ENCFF816XPK bigBed narrowPeak peaks ENCSR807BGP ChIP-seq EFO:0002067 K562 cell line Homo sapiens MTA1-human ENCAB000BCN DNA False 2017-05-17 ENCODE 1 ENCFF724MJA 13013199 ENCODE Processing Pipeline bfcf2b00d0a1b1f78ccbcee31e7e1365 https://www.encodeproject.org/files/ENCFF816XPK/@@download/ENCFF816XPK.bigBed GRCh38 released borderline replicate concordance ENCFF843MEU bed narrowPeak conservative idr thresholded peaks ENCSR807BGP ChIP-seq EFO:0002067 K562 cell line Homo sapiens MTA1-human ENCAB000BCN DNA False 2017-05-17 ENCODE 1, 2 ENCFF002ZRH, ENCFF411DEF, ENCFF419RSJ, ENCFF724MJA 198575 ENCODE Processing Pipeline 1db4df0b0089fadf4b6468b67890deff https://www.encodeproject.org/files/ENCFF843MEU/@@download/ENCFF843MEU.bed.gz GRCh38 released borderline replicate concordance ENCFF937SJT bigBed narrowPeak peaks ENCSR807BGP ChIP-seq EFO:0002067 K562 cell line Homo sapiens MTA1-human ENCAB000BCN DNA False 2017-05-17 ENCODE 2 ENCFF411DEF 13284153 ENCODE Processing Pipeline 50e25d9bb9d3adf3d594236ed8912ac3 https://www.encodeproject.org/files/ENCFF937SJT/@@download/ENCFF937SJT.bigBed GRCh38 released borderline replicate concordance ENCFF724MJA bed narrowPeak peaks ENCSR807BGP ChIP-seq EFO:0002067 K562 cell line Homo sapiens MTA1-human ENCAB000BCN DNA False 2017-05-17 ENCODE 1 ENCFF241GJI, ENCFF910IKB 6959549 ENCODE Processing Pipeline e73af50fb431a48550eb58cc31b3fffd https://www.encodeproject.org/files/ENCFF724MJA/@@download/ENCFF724MJA.bed.gz GRCh38 released borderline replicate concordance ENCFF002ZRH bed narrowPeak peaks ENCSR807BGP ChIP-seq EFO:0002067 K562 cell line Homo sapiens MTA1-human ENCAB000BCN DNA False 2017-05-17 ENCODE 1, 2 ENCFF227IZS, ENCFF241GJI, ENCFF647FZE, ENCFF910IKB 7252384 ENCODE Processing Pipeline 731228a3c1acb8f944968956491a282c https://www.encodeproject.org/files/ENCFF002ZRH/@@download/ENCFF002ZRH.bed.gz GRCh38 released borderline replicate concordance ENCFF494BQL bigBed narrowPeak peaks ENCSR807BGP ChIP-seq EFO:0002067 K562 cell line Homo sapiens MTA1-human ENCAB000BCN DNA False 2017-05-17 ENCODE 1 ENCFF387NDE 13008885 ENCODE Processing Pipeline 49becef4d91aac4f754c004cbba33eb9 https://www.encodeproject.org/files/ENCFF494BQL/@@download/ENCFF494BQL.bigBed hg19 released borderline replicate concordance ENCFF407VAS bed narrowPeak conservative idr thresholded peaks ENCSR807BGP ChIP-seq EFO:0002067 K562 cell line Homo sapiens MTA1-human ENCAB000BCN DNA False 2017-05-17 ENCODE 1, 2 ENCFF001TDO, ENCFF253PLF, ENCFF387NDE, ENCFF658ZHZ 199852 ENCODE Processing Pipeline 6f75192193f0a2bef5ddc99e7a21e518 https://www.encodeproject.org/files/ENCFF407VAS/@@download/ENCFF407VAS.bed.gz hg19 released borderline replicate concordance ENCFF769GYG bed narrowPeak optimal idr thresholded peaks ENCSR807BGP ChIP-seq EFO:0002067 K562 cell line Homo sapiens MTA1-human ENCAB000BCN DNA False 2017-05-17 ENCODE 1, 2 ENCFF001TDO, ENCFF253PLF, ENCFF387NDE, ENCFF658ZHZ 334404 ENCODE Processing Pipeline 9721f8e11cc0a98b2e92a7ee4f682542 https://www.encodeproject.org/files/ENCFF769GYG/@@download/ENCFF769GYG.bed.gz hg19 released borderline replicate concordance ENCFF153TPZ bigWig signal p-value ENCSR807BGP ChIP-seq EFO:0002067 K562 cell line Homo sapiens MTA1-human ENCAB000BCN DNA False 2017-05-17 ENCODE 1 ENCFF412LRS, ENCFF581ZJL 1126369034 ENCODE Processing Pipeline 7ae9a042583264d5b75745fb87249419 https://www.encodeproject.org/files/ENCFF153TPZ/@@download/ENCFF153TPZ.bigWig hg19 released borderline replicate concordance ENCFF535IWD bigWig fold change over control ENCSR807BGP ChIP-seq EFO:0002067 K562 cell line Homo sapiens MTA1-human ENCAB000BCN DNA False 2017-05-17 ENCODE 1 ENCFF412LRS, ENCFF581ZJL 1083565072 ENCODE Processing Pipeline 0fe3a32d18c56b9f8ec1a0e71f404afb https://www.encodeproject.org/files/ENCFF535IWD/@@download/ENCFF535IWD.bigWig hg19 released borderline replicate concordance ENCFF433PDE bigWig fold change over control ENCSR807BGP ChIP-seq EFO:0002067 K562 cell line Homo sapiens MTA1-human ENCAB000BCN DNA False 2017-05-17 ENCODE 2 ENCFF051LWI, ENCFF950LGW 1146551461 ENCODE Processing Pipeline 81bc19fa677b1f15402f2faff306eac5 https://www.encodeproject.org/files/ENCFF433PDE/@@download/ENCFF433PDE.bigWig hg19 released borderline replicate concordance ENCFF253PLF bed narrowPeak peaks ENCSR807BGP ChIP-seq EFO:0002067 K562 cell line Homo sapiens MTA1-human ENCAB000BCN DNA False 2017-05-17 ENCODE 2 ENCFF051LWI, ENCFF950LGW 6719475 ENCODE Processing Pipeline f3894190ca5645019fbfae164354c932 https://www.encodeproject.org/files/ENCFF253PLF/@@download/ENCFF253PLF.bed.gz hg19 released borderline replicate concordance ENCFF056TVE bigBed narrowPeak peaks ENCSR807BGP ChIP-seq EFO:0002067 K562 cell line Homo sapiens MTA1-human ENCAB000BCN DNA False 2017-05-17 ENCODE 1, 2 ENCFF658ZHZ 12969894 ENCODE Processing Pipeline dae1f95119a9fb7649f7a71db3574d5c https://www.encodeproject.org/files/ENCFF056TVE/@@download/ENCFF056TVE.bigBed hg19 released borderline replicate concordance ENCFF673AXH bigWig signal p-value ENCSR807BGP ChIP-seq EFO:0002067 K562 cell line Homo sapiens MTA1-human ENCAB000BCN DNA False 2017-05-17 ENCODE 2 ENCFF051LWI, ENCFF950LGW 1149072544 ENCODE Processing Pipeline fc4746a61913b72a09f715a5df7ad2f1 https://www.encodeproject.org/files/ENCFF673AXH/@@download/ENCFF673AXH.bigWig hg19 released borderline replicate concordance ENCFF387NDE bed narrowPeak peaks ENCSR807BGP ChIP-seq EFO:0002067 K562 cell line Homo sapiens MTA1-human ENCAB000BCN DNA False 2017-05-17 ENCODE 1 ENCFF412LRS, ENCFF581ZJL 6967086 ENCODE Processing Pipeline 36aa5a16f94265a8106622b095f3da35 https://www.encodeproject.org/files/ENCFF387NDE/@@download/ENCFF387NDE.bed.gz hg19 released borderline replicate concordance ENCFF658ZHZ bed narrowPeak peaks ENCSR807BGP ChIP-seq EFO:0002067 K562 cell line Homo sapiens MTA1-human ENCAB000BCN DNA False 2017-05-17 ENCODE 1, 2 ENCFF051LWI, ENCFF412LRS, ENCFF581ZJL, ENCFF950LGW 7251771 ENCODE Processing Pipeline c420bf9bfec2cbbaec23f1b7ad1dc794 https://www.encodeproject.org/files/ENCFF658ZHZ/@@download/ENCFF658ZHZ.bed.gz hg19 released borderline replicate concordance ENCFF445RPZ bigWig signal p-value ENCSR807BGP ChIP-seq EFO:0002067 K562 cell line Homo sapiens MTA1-human ENCAB000BCN DNA False 2017-05-17 ENCODE 1, 2 ENCFF051LWI, ENCFF412LRS, ENCFF581ZJL, ENCFF950LGW 1887812738 ENCODE Processing Pipeline 5cf96786a009e79be07167bf2c9b5779 https://www.encodeproject.org/files/ENCFF445RPZ/@@download/ENCFF445RPZ.bigWig hg19 released borderline replicate concordance ENCFF194ZGF bigWig fold change over control ENCSR807BGP ChIP-seq EFO:0002067 K562 cell line Homo sapiens MTA1-human ENCAB000BCN DNA False 2017-05-17 ENCODE 1, 2 ENCFF051LWI, ENCFF412LRS, ENCFF581ZJL, ENCFF950LGW 2044656424 ENCODE Processing Pipeline a0d1369669381bc8fbb399181271a27c https://www.encodeproject.org/files/ENCFF194ZGF/@@download/ENCFF194ZGF.bigWig hg19 released borderline replicate concordance ENCFF993BZU bigBed narrowPeak peaks ENCSR807BGP ChIP-seq EFO:0002067 K562 cell line Homo sapiens MTA1-human ENCAB000BCN DNA False 2017-05-17 ENCODE 2 ENCFF253PLF 13271677 ENCODE Processing Pipeline 65667cf0beda8f0369cb42ca16119a6e https://www.encodeproject.org/files/ENCFF993BZU/@@download/ENCFF993BZU.bigBed hg19 released borderline replicate concordance ENCFF180XEU bigBed narrowPeak conservative idr thresholded peaks ENCSR807BGP ChIP-seq EFO:0002067 K562 cell line Homo sapiens MTA1-human ENCAB000BCN DNA False 2017-05-17 ENCODE 1, 2 ENCFF407VAS 480875 ENCODE Processing Pipeline a7c79958c5bd333b42cfc4171f9bf7fd https://www.encodeproject.org/files/ENCFF180XEU/@@download/ENCFF180XEU.bigBed hg19 released borderline replicate concordance ENCFF845IDA bigBed narrowPeak optimal idr thresholded peaks ENCSR807BGP ChIP-seq EFO:0002067 K562 cell line Homo sapiens MTA1-human ENCAB000BCN DNA False 2017-05-17 ENCODE 1, 2 ENCFF769GYG 694073 ENCODE Processing Pipeline 829bc741ec2691e24f4a285d81637993 https://www.encodeproject.org/files/ENCFF845IDA/@@download/ENCFF845IDA.bigBed hg19 released borderline replicate concordance ENCFF188UON bam unfiltered alignments ENCSR411UYA ChIP-seq EFO:0002067 K562 cell line Homo sapiens MTA2-human ENCAB600VSM DNA False 2016-06-14 ENCODE 1 100 ENCFF259AYK, ENCFF693GDA, ENCFF807MUK 4962852802 ENCODE Processing Pipeline fa944a5bf768ac9ffdd52e3daf87973f https://www.encodeproject.org/files/ENCFF188UON/@@download/ENCFF188UON.bam hg19 released ENCFF419LOA bam unfiltered alignments ENCSR411UYA ChIP-seq EFO:0002067 K562 cell line Homo sapiens MTA2-human ENCAB600VSM DNA False 2016-06-14 ENCODE 2 100 ENCFF238FNW, ENCFF693CFR, ENCFF807MUK 4429935891 ENCODE Processing Pipeline 0512e04f772183399a5db3757e6a1f01 https://www.encodeproject.org/files/ENCFF419LOA/@@download/ENCFF419LOA.bam hg19 released ENCFF693CFR fastq reads ENCSR411UYA ChIP-seq EFO:0002067 K562 cell line Homo sapiens MTA2-human ENCAB600VSM DNA False 2016-06-14 ENCODE 2 1 100 paired-ended 1 ENCFF238FNW 1978407783 Michael Snyder, Stanford 10ac7c64c3d5bb5456ecce390d0cd5e5 SRA:SRR5111554 https://www.encodeproject.org/files/ENCFF693CFR/@@download/ENCFF693CFR.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFD/ released ENCFF693GDA fastq reads ENCSR411UYA ChIP-seq EFO:0002067 K562 cell line Homo sapiens MTA2-human ENCAB600VSM DNA False 2016-06-14 ENCODE 1 1 100 paired-ended 1 ENCFF259AYK 2283128978 Michael Snyder, Stanford 6a5e63d18908c61aa3f4dc609c368a2c SRA:SRR5111555 https://www.encodeproject.org/files/ENCFF693GDA/@@download/ENCFF693GDA.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFF/ released ENCFF259AYK fastq reads ENCSR411UYA ChIP-seq EFO:0002067 K562 cell line Homo sapiens MTA2-human ENCAB600VSM DNA False 2016-06-14 ENCODE 1 1 100 paired-ended 2 ENCFF693GDA 2272823836 Michael Snyder, Stanford 71f39f310e3b43f84b7c9a673e4b5675 SRA:SRR5111555 https://www.encodeproject.org/files/ENCFF259AYK/@@download/ENCFF259AYK.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFH/ released ENCFF238FNW fastq reads ENCSR411UYA ChIP-seq EFO:0002067 K562 cell line Homo sapiens MTA2-human ENCAB600VSM DNA False 2016-06-14 ENCODE 2 1 100 paired-ended 2 ENCFF693CFR 2052755704 Michael Snyder, Stanford d6e74135ca69c3df387d22cd957efeff SRA:SRR5111554 https://www.encodeproject.org/files/ENCFF238FNW/@@download/ENCFF238FNW.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFA/ released ENCFF539VZJ bam alignments ENCSR411UYA ChIP-seq EFO:0002067 K562 cell line Homo sapiens MTA2-human ENCAB600VSM DNA False 2016-06-14 ENCODE 2 100 ENCFF238FNW, ENCFF693CFR, ENCFF807MUK 3792637366 ENCODE Processing Pipeline 72caaa2bf015821c1be30c35b6ac9a66 https://www.encodeproject.org/files/ENCFF539VZJ/@@download/ENCFF539VZJ.bam hg19 released ENCFF063DLZ bam alignments ENCSR411UYA ChIP-seq EFO:0002067 K562 cell line Homo sapiens MTA2-human ENCAB600VSM DNA False 2016-06-14 ENCODE 1 100 ENCFF259AYK, ENCFF693GDA, ENCFF807MUK 4155588807 ENCODE Processing Pipeline cfad64744db976ad3b90fc5772b5ab56 https://www.encodeproject.org/files/ENCFF063DLZ/@@download/ENCFF063DLZ.bam hg19 released ENCFF667ZWW bigWig signal p-value ENCSR411UYA ChIP-seq EFO:0002067 K562 cell line Homo sapiens MTA2-human ENCAB600VSM DNA False 2016-06-14 ENCODE 2 ENCFF051LWI, ENCFF539VZJ 1084220003 ENCODE Processing Pipeline d069b04a4f4407393bf46a7e4565f049 https://www.encodeproject.org/files/ENCFF667ZWW/@@download/ENCFF667ZWW.bigWig hg19 released ENCFF914GUM bigWig fold change over control ENCSR411UYA ChIP-seq EFO:0002067 K562 cell line Homo sapiens MTA2-human ENCAB600VSM DNA False 2016-06-14 ENCODE 2 ENCFF051LWI, ENCFF539VZJ 1057102236 ENCODE Processing Pipeline cf31bacf4ae8cc5be35a3e1f46e9588e https://www.encodeproject.org/files/ENCFF914GUM/@@download/ENCFF914GUM.bigWig hg19 released ENCFF783HJX bam unfiltered alignments ENCSR411UYA ChIP-seq EFO:0002067 K562 cell line Homo sapiens MTA2-human ENCAB600VSM DNA False 2016-06-14 ENCODE 2 100 ENCFF238FNW, ENCFF643CGH, ENCFF693CFR 4434668233 ENCODE Processing Pipeline a377d61d619e93d8980782a85448e7ea https://www.encodeproject.org/files/ENCFF783HJX/@@download/ENCFF783HJX.bam GRCh38 released ENCFF884PHH bam unfiltered alignments ENCSR411UYA ChIP-seq EFO:0002067 K562 cell line Homo sapiens MTA2-human ENCAB600VSM DNA False 2016-06-14 ENCODE 1 100 ENCFF259AYK, ENCFF643CGH, ENCFF693GDA 4967855179 ENCODE Processing Pipeline ed2fc76956d42e67d0829c99cc2479de https://www.encodeproject.org/files/ENCFF884PHH/@@download/ENCFF884PHH.bam GRCh38 released ENCFF563DGZ bam alignments ENCSR411UYA ChIP-seq EFO:0002067 K562 cell line Homo sapiens MTA2-human ENCAB600VSM DNA False 2016-06-14 ENCODE 2 100 ENCFF238FNW, ENCFF643CGH, ENCFF693CFR 3796278466 ENCODE Processing Pipeline cc31ce6b083588fa8fd37e3d016e1c17 https://www.encodeproject.org/files/ENCFF563DGZ/@@download/ENCFF563DGZ.bam GRCh38 released ENCFF750EKT bam alignments ENCSR411UYA ChIP-seq EFO:0002067 K562 cell line Homo sapiens MTA2-human ENCAB600VSM DNA False 2016-06-14 ENCODE 1 100 ENCFF259AYK, ENCFF643CGH, ENCFF693GDA 4158977060 ENCODE Processing Pipeline ffa7643e6686dff80273079b23ba6526 https://www.encodeproject.org/files/ENCFF750EKT/@@download/ENCFF750EKT.bam GRCh38 released ENCFF119WHI bigWig signal p-value ENCSR411UYA ChIP-seq EFO:0002067 K562 cell line Homo sapiens MTA2-human ENCAB600VSM DNA False 2016-06-14 ENCODE 1 ENCFF750EKT, ENCFF910IKB 1161355321 ENCODE Processing Pipeline 03cfd6fdf2568f290d17f2fcb8fdd2b7 https://www.encodeproject.org/files/ENCFF119WHI/@@download/ENCFF119WHI.bigWig GRCh38 released ENCFF243GWI bigWig signal p-value ENCSR411UYA ChIP-seq EFO:0002067 K562 cell line Homo sapiens MTA2-human ENCAB600VSM DNA False 2016-06-14 ENCODE 2 ENCFF227IZS, ENCFF563DGZ 1060465574 ENCODE Processing Pipeline 4416528194970741cba830e148a11f13 https://www.encodeproject.org/files/ENCFF243GWI/@@download/ENCFF243GWI.bigWig GRCh38 released ENCFF361TVB bigWig signal p-value ENCSR411UYA ChIP-seq EFO:0002067 K562 cell line Homo sapiens MTA2-human ENCAB600VSM DNA False 2016-06-14 ENCODE 1, 2 ENCFF227IZS, ENCFF563DGZ, ENCFF750EKT, ENCFF910IKB 1992646330 ENCODE Processing Pipeline 30a92b60be9ff6a2c3d3cb0912a43419 https://www.encodeproject.org/files/ENCFF361TVB/@@download/ENCFF361TVB.bigWig GRCh38 released ENCFF336IHE bigWig fold change over control ENCSR411UYA ChIP-seq EFO:0002067 K562 cell line Homo sapiens MTA2-human ENCAB600VSM DNA False 2016-06-14 ENCODE 1 ENCFF750EKT, ENCFF910IKB 1140373128 ENCODE Processing Pipeline f12f97d20d0399d245906e344dfb8c17 https://www.encodeproject.org/files/ENCFF336IHE/@@download/ENCFF336IHE.bigWig GRCh38 released ENCFF559DOZ bigWig fold change over control ENCSR411UYA ChIP-seq EFO:0002067 K562 cell line Homo sapiens MTA2-human ENCAB600VSM DNA False 2016-06-14 ENCODE 2 ENCFF227IZS, ENCFF563DGZ 1057735004 ENCODE Processing Pipeline 631147152913a3c50a148ca613e1cc91 https://www.encodeproject.org/files/ENCFF559DOZ/@@download/ENCFF559DOZ.bigWig GRCh38 released ENCFF905FAZ bigWig fold change over control ENCSR411UYA ChIP-seq EFO:0002067 K562 cell line Homo sapiens MTA2-human ENCAB600VSM DNA False 2016-06-14 ENCODE 1, 2 ENCFF227IZS, ENCFF563DGZ, ENCFF750EKT, ENCFF910IKB 2052742468 ENCODE Processing Pipeline bfb386667ba55d7a035faef50e0fe1e6 https://www.encodeproject.org/files/ENCFF905FAZ/@@download/ENCFF905FAZ.bigWig GRCh38 released ENCFF555TEL bed narrowPeak peaks ENCSR411UYA ChIP-seq EFO:0002067 K562 cell line Homo sapiens MTA2-human ENCAB600VSM DNA False 2016-06-14 ENCODE 1 ENCFF750EKT, ENCFF910IKB 6657617 ENCODE Processing Pipeline 5ffc028e5f6966158b641136d09a2ec2 https://www.encodeproject.org/files/ENCFF555TEL/@@download/ENCFF555TEL.bed.gz GRCh38 released ENCFF522CRC bed narrowPeak peaks ENCSR411UYA ChIP-seq EFO:0002067 K562 cell line Homo sapiens MTA2-human ENCAB600VSM DNA False 2016-06-14 ENCODE 2 ENCFF227IZS, ENCFF563DGZ 6744559 ENCODE Processing Pipeline fdfb738531591607b7a83d3a74eb0f1a https://www.encodeproject.org/files/ENCFF522CRC/@@download/ENCFF522CRC.bed.gz GRCh38 released ENCFF930YEZ bed narrowPeak peaks ENCSR411UYA ChIP-seq EFO:0002067 K562 cell line Homo sapiens MTA2-human ENCAB600VSM DNA False 2016-06-14 ENCODE 1, 2 ENCFF227IZS, ENCFF563DGZ, ENCFF750EKT, ENCFF910IKB 7232862 ENCODE Processing Pipeline f5625116dea33ad50cfcfcf0e294a06d https://www.encodeproject.org/files/ENCFF930YEZ/@@download/ENCFF930YEZ.bed.gz GRCh38 released ENCFF153MTW bigBed narrowPeak peaks ENCSR411UYA ChIP-seq EFO:0002067 K562 cell line Homo sapiens MTA2-human ENCAB600VSM DNA False 2016-06-14 ENCODE 1 ENCFF555TEL 13161730 ENCODE Processing Pipeline 9bb8ba97c95eff16dd18cca5651c719d https://www.encodeproject.org/files/ENCFF153MTW/@@download/ENCFF153MTW.bigBed GRCh38 released ENCFF228CZV bigBed narrowPeak peaks ENCSR411UYA ChIP-seq EFO:0002067 K562 cell line Homo sapiens MTA2-human ENCAB600VSM DNA False 2016-06-14 ENCODE 2 ENCFF522CRC 13121417 ENCODE Processing Pipeline b337e490fd587e07f4d039278c70fca6 https://www.encodeproject.org/files/ENCFF228CZV/@@download/ENCFF228CZV.bigBed GRCh38 released ENCFF955PON bigBed narrowPeak peaks ENCSR411UYA ChIP-seq EFO:0002067 K562 cell line Homo sapiens MTA2-human ENCAB600VSM DNA False 2016-06-14 ENCODE 1, 2 ENCFF930YEZ 12930185 ENCODE Processing Pipeline 4b3c6a39786d0d0e23f58d3aca58da30 https://www.encodeproject.org/files/ENCFF955PON/@@download/ENCFF955PON.bigBed GRCh38 released ENCFF558XIL bed narrowPeak optimal idr thresholded peaks ENCSR411UYA ChIP-seq EFO:0002067 K562 cell line Homo sapiens MTA2-human ENCAB600VSM DNA False 2016-06-14 ENCODE 1, 2 ENCFF419RSJ, ENCFF522CRC, ENCFF555TEL, ENCFF930YEZ 278755 ENCODE Processing Pipeline 8d835dff011022794af375901627d2ee https://www.encodeproject.org/files/ENCFF558XIL/@@download/ENCFF558XIL.bed.gz GRCh38 released ENCFF540UXO bigBed narrowPeak optimal idr thresholded peaks ENCSR411UYA ChIP-seq EFO:0002067 K562 cell line Homo sapiens MTA2-human ENCAB600VSM DNA False 2016-06-14 ENCODE 1, 2 ENCFF558XIL 589268 ENCODE Processing Pipeline a2861ffd68bb9f881f3018860ce86a67 https://www.encodeproject.org/files/ENCFF540UXO/@@download/ENCFF540UXO.bigBed GRCh38 released ENCFF996EFD bigWig signal p-value ENCSR411UYA ChIP-seq EFO:0002067 K562 cell line Homo sapiens MTA2-human ENCAB600VSM DNA False 2016-06-14 ENCODE 1 ENCFF063DLZ, ENCFF581ZJL 1219952694 ENCODE Processing Pipeline 3297d20dc2737e2d3b57531bce4bc15a https://www.encodeproject.org/files/ENCFF996EFD/@@download/ENCFF996EFD.bigWig hg19 released ENCFF304NUO bigBed narrowPeak peaks ENCSR411UYA ChIP-seq EFO:0002067 K562 cell line Homo sapiens MTA2-human ENCAB600VSM DNA False 2016-06-14 ENCODE 1 ENCFF084ILX 13161547 ENCODE Processing Pipeline 7e268e5e32177f7cdd495bb306e38aa0 https://www.encodeproject.org/files/ENCFF304NUO/@@download/ENCFF304NUO.bigBed hg19 released ENCFF355WVV bigWig fold change over control ENCSR411UYA ChIP-seq EFO:0002067 K562 cell line Homo sapiens MTA2-human ENCAB600VSM DNA False 2016-06-14 ENCODE 1 ENCFF063DLZ, ENCFF581ZJL 1136921478 ENCODE Processing Pipeline 9de3a1b13adbeea2669e9c297cd99a6c https://www.encodeproject.org/files/ENCFF355WVV/@@download/ENCFF355WVV.bigWig hg19 released ENCFF925QKK bigWig fold change over control ENCSR411UYA ChIP-seq EFO:0002067 K562 cell line Homo sapiens MTA2-human ENCAB600VSM DNA False 2016-06-14 ENCODE 1, 2 ENCFF051LWI, ENCFF063DLZ, ENCFF539VZJ, ENCFF581ZJL 2067117330 ENCODE Processing Pipeline 8437f31a676a9ca3fd096f75dce64e18 https://www.encodeproject.org/files/ENCFF925QKK/@@download/ENCFF925QKK.bigWig hg19 released ENCFF778TXT bed narrowPeak conservative idr thresholded peaks ENCSR411UYA ChIP-seq EFO:0002067 K562 cell line Homo sapiens MTA2-human ENCAB600VSM DNA False 2016-06-14 ENCODE 1, 2 ENCFF001TDO, ENCFF084ILX, ENCFF605LJE, ENCFF850ENR 284610 ENCODE Processing Pipeline 37c88c600d2774186bc3228c17581896 https://www.encodeproject.org/files/ENCFF778TXT/@@download/ENCFF778TXT.bed.gz hg19 released ENCFF024JWM bigWig signal p-value ENCSR411UYA ChIP-seq EFO:0002067 K562 cell line Homo sapiens MTA2-human ENCAB600VSM DNA False 2016-06-14 ENCODE 1, 2 ENCFF051LWI, ENCFF063DLZ, ENCFF539VZJ, ENCFF581ZJL 1737633751 ENCODE Processing Pipeline 67a309a92a41be3ff2834a36169a7597 https://www.encodeproject.org/files/ENCFF024JWM/@@download/ENCFF024JWM.bigWig hg19 released ENCFF298HZA bigBed narrowPeak peaks ENCSR411UYA ChIP-seq EFO:0002067 K562 cell line Homo sapiens MTA2-human ENCAB600VSM DNA False 2016-06-14 ENCODE 2 ENCFF850ENR 13096942 ENCODE Processing Pipeline f0e696186f42c101f8d78512e8daca35 https://www.encodeproject.org/files/ENCFF298HZA/@@download/ENCFF298HZA.bigBed hg19 released ENCFF647VHP bigBed narrowPeak optimal idr thresholded peaks ENCSR411UYA ChIP-seq EFO:0002067 K562 cell line Homo sapiens MTA2-human ENCAB600VSM DNA False 2016-06-14 ENCODE 1, 2 ENCFF662MVX 749526 ENCODE Processing Pipeline 8d542b9ee0b487c4b79e9d501f858be4 https://www.encodeproject.org/files/ENCFF647VHP/@@download/ENCFF647VHP.bigBed hg19 released ENCFF084ILX bed narrowPeak peaks ENCSR411UYA ChIP-seq EFO:0002067 K562 cell line Homo sapiens MTA2-human ENCAB600VSM DNA False 2016-06-14 ENCODE 1 ENCFF063DLZ, ENCFF581ZJL 6667597 ENCODE Processing Pipeline 360bae6f96a56e295c8cf96a5d962f32 https://www.encodeproject.org/files/ENCFF084ILX/@@download/ENCFF084ILX.bed.gz hg19 released ENCFF850ENR bed narrowPeak peaks ENCSR411UYA ChIP-seq EFO:0002067 K562 cell line Homo sapiens MTA2-human ENCAB600VSM DNA False 2016-06-14 ENCODE 2 ENCFF051LWI, ENCFF539VZJ 6735588 ENCODE Processing Pipeline f1a7d7acf30f8769e3ec52429b8541d6 https://www.encodeproject.org/files/ENCFF850ENR/@@download/ENCFF850ENR.bed.gz hg19 released ENCFF605LJE bed narrowPeak peaks ENCSR411UYA ChIP-seq EFO:0002067 K562 cell line Homo sapiens MTA2-human ENCAB600VSM DNA False 2016-06-14 ENCODE 1, 2 ENCFF051LWI, ENCFF063DLZ, ENCFF539VZJ, ENCFF581ZJL 7237606 ENCODE Processing Pipeline 86a80d8937e56eb9206edddc2230c24d https://www.encodeproject.org/files/ENCFF605LJE/@@download/ENCFF605LJE.bed.gz hg19 released ENCFF483GTX bigBed narrowPeak peaks ENCSR411UYA ChIP-seq EFO:0002067 K562 cell line Homo sapiens MTA2-human ENCAB600VSM DNA False 2016-06-14 ENCODE 1, 2 ENCFF605LJE 12927004 ENCODE Processing Pipeline b42234f213f762363ca19de25dca4f96 https://www.encodeproject.org/files/ENCFF483GTX/@@download/ENCFF483GTX.bigBed hg19 released ENCFF772AAB bigBed narrowPeak conservative idr thresholded peaks ENCSR411UYA ChIP-seq EFO:0002067 K562 cell line Homo sapiens MTA2-human ENCAB600VSM DNA False 2016-06-14 ENCODE 1, 2 ENCFF778TXT 592134 ENCODE Processing Pipeline 73a2a9802381fa69b69a5c9e5ffb8ea2 https://www.encodeproject.org/files/ENCFF772AAB/@@download/ENCFF772AAB.bigBed hg19 released ENCFF662MVX bed narrowPeak optimal idr thresholded peaks ENCSR411UYA ChIP-seq EFO:0002067 K562 cell line Homo sapiens MTA2-human ENCAB600VSM DNA False 2016-06-14 ENCODE 1, 2 ENCFF001TDO, ENCFF084ILX, ENCFF605LJE, ENCFF850ENR 384677 ENCODE Processing Pipeline 21d4fc2074ca86610ddb256b957f4bfa https://www.encodeproject.org/files/ENCFF662MVX/@@download/ENCFF662MVX.bed.gz hg19 released ENCFF238IYZ fastq reads ENCSR697YLJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBFA2T3-human ENCAB565MLN DNA False 2017-09-28 ENCODE 1 1 100 paired-ended 1 ENCFF203LDU 2957145081 Michael Snyder, Stanford 7abab00ba9ecfa89aeb8ed931b163b1e SRA:SRR6213726 https://www.encodeproject.org/files/ENCFF238IYZ/@@download/ENCFF238IYZ.fastq.gz Illumina HiSeq 2000 /files/ENCFF410PHD/ released ENCFF256ZUF fastq reads ENCSR697YLJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBFA2T3-human ENCAB565MLN DNA False 2017-09-28 ENCODE 2 1 100 paired-ended 1 ENCFF090VRQ 2432745460 Michael Snyder, Stanford 9d227330be0ccb89da65b5401080d3f0 SRA:SRR6213725 https://www.encodeproject.org/files/ENCFF256ZUF/@@download/ENCFF256ZUF.fastq.gz Illumina HiSeq 2000 /files/ENCFF240DTE/ released ENCFF090VRQ fastq reads ENCSR697YLJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBFA2T3-human ENCAB565MLN DNA False 2017-09-28 ENCODE 2 1 100 paired-ended 2 ENCFF256ZUF 2474128225 Michael Snyder, Stanford 008f138f172e3f26431136dd9e5398f4 SRA:SRR6213725 https://www.encodeproject.org/files/ENCFF090VRQ/@@download/ENCFF090VRQ.fastq.gz Illumina HiSeq 2000 /files/ENCFF608MDV/ released ENCFF203LDU fastq reads ENCSR697YLJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBFA2T3-human ENCAB565MLN DNA False 2017-09-28 ENCODE 1 1 100 paired-ended 2 ENCFF238IYZ 3001902871 Michael Snyder, Stanford c2badbf4b77b902da487abc3a7385177 SRA:SRR6213726 https://www.encodeproject.org/files/ENCFF203LDU/@@download/ENCFF203LDU.fastq.gz Illumina HiSeq 2000 /files/ENCFF368UOC/ released ENCFF684LTP bam unfiltered alignments ENCSR697YLJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBFA2T3-human ENCAB565MLN DNA False 2017-09-28 ENCODE 1 100 ENCFF203LDU, ENCFF238IYZ, ENCFF643CGH 6334132381 ENCODE Processing Pipeline b032603275873e88f7043a4105b33bb2 https://www.encodeproject.org/files/ENCFF684LTP/@@download/ENCFF684LTP.bam GRCh38 released ENCFF334NMV bam unfiltered alignments ENCSR697YLJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBFA2T3-human ENCAB565MLN DNA False 2017-09-28 ENCODE 2 100 ENCFF090VRQ, ENCFF256ZUF, ENCFF643CGH 5312343928 ENCODE Processing Pipeline 4483b978fcae8300736c85657420013b https://www.encodeproject.org/files/ENCFF334NMV/@@download/ENCFF334NMV.bam GRCh38 released ENCFF808QZH bam unfiltered alignments ENCSR697YLJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBFA2T3-human ENCAB565MLN DNA False 2017-09-28 ENCODE 2 100 ENCFF090VRQ, ENCFF256ZUF, ENCFF807MUK 5306660927 ENCODE Processing Pipeline ca55cb594322a6fedb8be90fbcbe0ee2 https://www.encodeproject.org/files/ENCFF808QZH/@@download/ENCFF808QZH.bam hg19 released ENCFF307ZMX bam unfiltered alignments ENCSR697YLJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBFA2T3-human ENCAB565MLN DNA False 2017-09-28 ENCODE 1 100 ENCFF203LDU, ENCFF238IYZ, ENCFF807MUK 6328061297 ENCODE Processing Pipeline 0b834976754a658cea14194bf58be612 https://www.encodeproject.org/files/ENCFF307ZMX/@@download/ENCFF307ZMX.bam hg19 released ENCFF940TNY bam alignments ENCSR697YLJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBFA2T3-human ENCAB565MLN DNA False 2017-09-28 ENCODE 2 100 ENCFF090VRQ, ENCFF256ZUF, ENCFF807MUK 4287809086 ENCODE Processing Pipeline 083dc96d7281cb51c7bbe61b62a09d28 https://www.encodeproject.org/files/ENCFF940TNY/@@download/ENCFF940TNY.bam hg19 released ENCFF473LBU bam alignments ENCSR697YLJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBFA2T3-human ENCAB565MLN DNA False 2017-09-28 ENCODE 2 100 ENCFF090VRQ, ENCFF256ZUF, ENCFF643CGH 4291365139 ENCODE Processing Pipeline 12098302fa1c5595351596fc236c9073 https://www.encodeproject.org/files/ENCFF473LBU/@@download/ENCFF473LBU.bam GRCh38 released ENCFF154KUY bam alignments ENCSR697YLJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBFA2T3-human ENCAB565MLN DNA False 2017-09-28 ENCODE 1 100 ENCFF203LDU, ENCFF238IYZ, ENCFF643CGH 5184903971 ENCODE Processing Pipeline 6ba0fb8a1a1bcefa7955adaa6f859b9b https://www.encodeproject.org/files/ENCFF154KUY/@@download/ENCFF154KUY.bam GRCh38 released ENCFF758IAE bam alignments ENCSR697YLJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBFA2T3-human ENCAB565MLN DNA False 2017-09-28 ENCODE 1 100 ENCFF203LDU, ENCFF238IYZ, ENCFF807MUK 5179970495 ENCODE Processing Pipeline ec006c07f19a7286528c56eb7d3d210c https://www.encodeproject.org/files/ENCFF758IAE/@@download/ENCFF758IAE.bam hg19 released ENCFF885YBC bed narrowPeak peaks ENCSR697YLJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBFA2T3-human ENCAB565MLN DNA False 2017-09-28 ENCODE 2 ENCFF262CJE, ENCFF506DFV, ENCFF940TNY 6671120 ENCODE Processing Pipeline 3c9b0642721801fa34d7567481bd8f30 https://www.encodeproject.org/files/ENCFF885YBC/@@download/ENCFF885YBC.bed.gz hg19 released ENCFF413NLP bigBed narrowPeak peaks ENCSR697YLJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBFA2T3-human ENCAB565MLN DNA False 2017-09-28 ENCODE 1 ENCFF120JHT 13676720 ENCODE Processing Pipeline e50460c2fc449ce9a1bcc0686848b02b https://www.encodeproject.org/files/ENCFF413NLP/@@download/ENCFF413NLP.bigBed hg19 released ENCFF469ATT bigBed narrowPeak conservative idr thresholded peaks ENCSR697YLJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBFA2T3-human ENCAB565MLN DNA False 2017-09-28 ENCODE 1, 2 ENCFF202JYJ 1674581 ENCODE Processing Pipeline 2e96d1c2995ed6c52f1f9fa37fe2181c https://www.encodeproject.org/files/ENCFF469ATT/@@download/ENCFF469ATT.bigBed hg19 released ENCFF262CZR bigWig signal p-value ENCSR697YLJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBFA2T3-human ENCAB565MLN DNA False 2017-09-28 ENCODE 1 ENCFF262CJE, ENCFF506DFV, ENCFF758IAE 1311954420 ENCODE Processing Pipeline bbb5df5b6c02a45a50a4a6b521bc20c3 https://www.encodeproject.org/files/ENCFF262CZR/@@download/ENCFF262CZR.bigWig hg19 released ENCFF854ZPL bed narrowPeak peaks ENCSR697YLJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBFA2T3-human ENCAB565MLN DNA False 2017-09-28 ENCODE 1, 2 ENCFF262CJE, ENCFF506DFV, ENCFF758IAE, ENCFF940TNY 7100970 ENCODE Processing Pipeline 502e4dd73f054e4daa26f7f69992c9de https://www.encodeproject.org/files/ENCFF854ZPL/@@download/ENCFF854ZPL.bed.gz hg19 released ENCFF814CRK bigWig signal p-value ENCSR697YLJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBFA2T3-human ENCAB565MLN DNA False 2017-09-28 ENCODE 1, 2 ENCFF262CJE, ENCFF506DFV, ENCFF758IAE, ENCFF940TNY 1509825133 ENCODE Processing Pipeline 4f553e8988202278ec01d6e10372d153 https://www.encodeproject.org/files/ENCFF814CRK/@@download/ENCFF814CRK.bigWig hg19 released ENCFF321EPM bigWig fold change over control ENCSR697YLJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBFA2T3-human ENCAB565MLN DNA False 2017-09-28 ENCODE 1, 2 ENCFF262CJE, ENCFF506DFV, ENCFF758IAE, ENCFF940TNY 1730031133 ENCODE Processing Pipeline 256779a669b6c2f4b24828412752ef48 https://www.encodeproject.org/files/ENCFF321EPM/@@download/ENCFF321EPM.bigWig hg19 released ENCFF504UNW bigBed narrowPeak peaks ENCSR697YLJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBFA2T3-human ENCAB565MLN DNA False 2017-09-28 ENCODE 2 ENCFF885YBC 13680240 ENCODE Processing Pipeline 8464c970c4117fca76eafca6fd92457c https://www.encodeproject.org/files/ENCFF504UNW/@@download/ENCFF504UNW.bigBed hg19 released ENCFF202JYJ bed narrowPeak conservative idr thresholded peaks ENCSR697YLJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBFA2T3-human ENCAB565MLN DNA False 2017-09-28 ENCODE 1, 2 ENCFF001TDO, ENCFF120JHT, ENCFF854ZPL, ENCFF885YBC 861057 ENCODE Processing Pipeline 7e1ff185b0298af44babe942b8646511 https://www.encodeproject.org/files/ENCFF202JYJ/@@download/ENCFF202JYJ.bed.gz hg19 released ENCFF655XAU bigWig fold change over control ENCSR697YLJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBFA2T3-human ENCAB565MLN DNA False 2017-09-28 ENCODE 1 ENCFF262CJE, ENCFF506DFV, ENCFF758IAE 1272921415 ENCODE Processing Pipeline d6dac335593a67e557c9322ba0599647 https://www.encodeproject.org/files/ENCFF655XAU/@@download/ENCFF655XAU.bigWig hg19 released ENCFF404ACT bigWig signal p-value ENCSR697YLJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBFA2T3-human ENCAB565MLN DNA False 2017-09-28 ENCODE 2 ENCFF262CJE, ENCFF506DFV, ENCFF940TNY 1128707230 ENCODE Processing Pipeline 8f262cb22637ef0c8561c26afe876547 https://www.encodeproject.org/files/ENCFF404ACT/@@download/ENCFF404ACT.bigWig hg19 released ENCFF193PDR bigBed narrowPeak peaks ENCSR697YLJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBFA2T3-human ENCAB565MLN DNA False 2017-09-28 ENCODE 1, 2 ENCFF854ZPL 13682283 ENCODE Processing Pipeline 948bec2cf55f03bdd79be302e632c788 https://www.encodeproject.org/files/ENCFF193PDR/@@download/ENCFF193PDR.bigBed hg19 released ENCFF677GDF bigWig fold change over control ENCSR697YLJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBFA2T3-human ENCAB565MLN DNA False 2017-09-28 ENCODE 2 ENCFF262CJE, ENCFF506DFV, ENCFF940TNY 1197274395 ENCODE Processing Pipeline bc153f4a1d9d61be1da59160122f652b https://www.encodeproject.org/files/ENCFF677GDF/@@download/ENCFF677GDF.bigWig hg19 released ENCFF748RLD bigBed narrowPeak optimal idr thresholded peaks ENCSR697YLJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBFA2T3-human ENCAB565MLN DNA False 2017-09-28 ENCODE 1, 2 ENCFF993GXU 1794121 ENCODE Processing Pipeline 76aded1ca2805abca668cc058e8748e4 https://www.encodeproject.org/files/ENCFF748RLD/@@download/ENCFF748RLD.bigBed hg19 released ENCFF120JHT bed narrowPeak peaks ENCSR697YLJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBFA2T3-human ENCAB565MLN DNA False 2017-09-28 ENCODE 1 ENCFF262CJE, ENCFF506DFV, ENCFF758IAE 6850036 ENCODE Processing Pipeline d4b532087801b4bfd18ba5a256b119ae https://www.encodeproject.org/files/ENCFF120JHT/@@download/ENCFF120JHT.bed.gz hg19 released ENCFF993GXU bed narrowPeak optimal idr thresholded peaks ENCSR697YLJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBFA2T3-human ENCAB565MLN DNA False 2017-09-28 ENCODE 1, 2 ENCFF001TDO, ENCFF120JHT, ENCFF854ZPL, ENCFF885YBC 940121 ENCODE Processing Pipeline 158d4fa23243d6d4e9f368b4106740cd https://www.encodeproject.org/files/ENCFF993GXU/@@download/ENCFF993GXU.bed.gz hg19 released ENCFF312UAO bigWig signal p-value ENCSR697YLJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBFA2T3-human ENCAB565MLN DNA False 2017-09-28 ENCODE 1, 2 ENCFF154KUY, ENCFF473LBU, ENCFF720AUK, ENCFF796JTX 1265709843 ENCODE Processing Pipeline c255701922f370de216353522a85989f https://www.encodeproject.org/files/ENCFF312UAO/@@download/ENCFF312UAO.bigWig GRCh38 released ENCFF609FYE bigWig fold change over control ENCSR697YLJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBFA2T3-human ENCAB565MLN DNA False 2017-09-28 ENCODE 1, 2 ENCFF154KUY, ENCFF473LBU, ENCFF720AUK, ENCFF796JTX 1728485546 ENCODE Processing Pipeline 1a534b9f6225511eab8f61b6f35eba7e https://www.encodeproject.org/files/ENCFF609FYE/@@download/ENCFF609FYE.bigWig GRCh38 released ENCFF431BBY bigBed narrowPeak peaks ENCSR697YLJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBFA2T3-human ENCAB565MLN DNA False 2017-09-28 ENCODE 1 ENCFF542HCK 13693647 ENCODE Processing Pipeline d04074f09a2298d4222eaa676290c13b https://www.encodeproject.org/files/ENCFF431BBY/@@download/ENCFF431BBY.bigBed GRCh38 released ENCFF272ZIM bigBed narrowPeak peaks ENCSR697YLJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBFA2T3-human ENCAB565MLN DNA False 2017-09-28 ENCODE 2 ENCFF200ACD 13697064 ENCODE Processing Pipeline 68cbea1ce05d4d4fd151c42d4aa932f7 https://www.encodeproject.org/files/ENCFF272ZIM/@@download/ENCFF272ZIM.bigBed GRCh38 released ENCFF019RJJ bigBed narrowPeak peaks ENCSR697YLJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBFA2T3-human ENCAB565MLN DNA False 2017-09-28 ENCODE 1, 2 ENCFF371RTL 13700492 ENCODE Processing Pipeline 4ce8a3af24f873ff90523fae274d8fc4 https://www.encodeproject.org/files/ENCFF019RJJ/@@download/ENCFF019RJJ.bigBed GRCh38 released ENCFF118ZAT bigWig signal p-value ENCSR697YLJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBFA2T3-human ENCAB565MLN DNA False 2017-09-28 ENCODE 1 ENCFF154KUY, ENCFF720AUK, ENCFF796JTX 1099036678 ENCODE Processing Pipeline 5d5c5a33e81af31f6bbe6657506a5786 https://www.encodeproject.org/files/ENCFF118ZAT/@@download/ENCFF118ZAT.bigWig GRCh38 released ENCFF652LEY bigWig fold change over control ENCSR697YLJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBFA2T3-human ENCAB565MLN DNA False 2017-09-28 ENCODE 1 ENCFF154KUY, ENCFF720AUK, ENCFF796JTX 1277434016 ENCODE Processing Pipeline 5ba0c1bc7811eceeebe9522d532e96d8 https://www.encodeproject.org/files/ENCFF652LEY/@@download/ENCFF652LEY.bigWig GRCh38 released ENCFF845OPG bed narrowPeak conservative idr thresholded peaks ENCSR697YLJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBFA2T3-human ENCAB565MLN DNA False 2017-09-28 ENCODE 1, 2 ENCFF200ACD, ENCFF371RTL, ENCFF419RSJ, ENCFF542HCK 864074 ENCODE Processing Pipeline 90f9bb22c0e01814ac79e39a8c41a6c9 https://www.encodeproject.org/files/ENCFF845OPG/@@download/ENCFF845OPG.bed.gz GRCh38 released ENCFF153IFH bed narrowPeak optimal idr thresholded peaks ENCSR697YLJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBFA2T3-human ENCAB565MLN DNA False 2017-09-28 ENCODE 1, 2 ENCFF200ACD, ENCFF371RTL, ENCFF419RSJ, ENCFF542HCK 938708 ENCODE Processing Pipeline cf527a00dd1ee7aca1ec7f1593edaa05 https://www.encodeproject.org/files/ENCFF153IFH/@@download/ENCFF153IFH.bed.gz GRCh38 released ENCFF200ACD bed narrowPeak peaks ENCSR697YLJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBFA2T3-human ENCAB565MLN DNA False 2017-09-28 ENCODE 2 ENCFF473LBU, ENCFF720AUK, ENCFF796JTX 6676159 ENCODE Processing Pipeline 735272f34ecad051b5931581076ee947 https://www.encodeproject.org/files/ENCFF200ACD/@@download/ENCFF200ACD.bed.gz GRCh38 released ENCFF371RTL bed narrowPeak peaks ENCSR697YLJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBFA2T3-human ENCAB565MLN DNA False 2017-09-28 ENCODE 1, 2 ENCFF154KUY, ENCFF473LBU, ENCFF720AUK, ENCFF796JTX 7109854 ENCODE Processing Pipeline 4eb4df3c82ffad4088133f6ef567a909 https://www.encodeproject.org/files/ENCFF371RTL/@@download/ENCFF371RTL.bed.gz GRCh38 released ENCFF747RIV bigWig signal p-value ENCSR697YLJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBFA2T3-human ENCAB565MLN DNA False 2017-09-28 ENCODE 2 ENCFF473LBU, ENCFF720AUK, ENCFF796JTX 1102236260 ENCODE Processing Pipeline e5dd206b163b4d0e0214b66110d52450 https://www.encodeproject.org/files/ENCFF747RIV/@@download/ENCFF747RIV.bigWig GRCh38 released ENCFF233WFJ bigWig fold change over control ENCSR697YLJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBFA2T3-human ENCAB565MLN DNA False 2017-09-28 ENCODE 2 ENCFF473LBU, ENCFF720AUK, ENCFF796JTX 1206211202 ENCODE Processing Pipeline b90d624ded9d59bb07a609328fb1d604 https://www.encodeproject.org/files/ENCFF233WFJ/@@download/ENCFF233WFJ.bigWig GRCh38 released ENCFF542HCK bed narrowPeak peaks ENCSR697YLJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBFA2T3-human ENCAB565MLN DNA False 2017-09-28 ENCODE 1 ENCFF154KUY, ENCFF720AUK, ENCFF796JTX 6858125 ENCODE Processing Pipeline 0d46a3d81c5b405cd1193b971910b059 https://www.encodeproject.org/files/ENCFF542HCK/@@download/ENCFF542HCK.bed.gz GRCh38 released ENCFF120TGZ bigBed narrowPeak conservative idr thresholded peaks ENCSR697YLJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBFA2T3-human ENCAB565MLN DNA False 2017-09-28 ENCODE 1, 2 ENCFF845OPG 1682324 ENCODE Processing Pipeline c4275ee5330255b857abcfcca9a50bde https://www.encodeproject.org/files/ENCFF120TGZ/@@download/ENCFF120TGZ.bigBed GRCh38 released ENCFF603DFR bigBed narrowPeak optimal idr thresholded peaks ENCSR697YLJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBFA2T3-human ENCAB565MLN DNA False 2017-09-28 ENCODE 1, 2 ENCFF153IFH 1795847 ENCODE Processing Pipeline bfb868eb608ea417a9d1417ccc529c5a https://www.encodeproject.org/files/ENCFF603DFR/@@download/ENCFF603DFR.bigBed GRCh38 released ENCFF808AUX fastq reads ENCSR491EBY ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARID2-human ENCAB655PST DNA False 2017-09-28 ENCODE 2 1 100 paired-ended 2 ENCFF272DKU 3031299635 Michael Snyder, Stanford 496be8f4ab4f3960bf2be75e4ea2ba77 SRA:SRR6213858 https://www.encodeproject.org/files/ENCFF808AUX/@@download/ENCFF808AUX.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFA/ released antibody characterized with exemption ENCFF272DKU fastq reads ENCSR491EBY ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARID2-human ENCAB655PST DNA False 2017-09-28 ENCODE 2 1 100 paired-ended 1 ENCFF808AUX 3020554193 Michael Snyder, Stanford 8fd140d9ebdf867a93d721c29801d743 SRA:SRR6213858 https://www.encodeproject.org/files/ENCFF272DKU/@@download/ENCFF272DKU.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFD/ released antibody characterized with exemption ENCFF991XUU fastq reads ENCSR491EBY ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARID2-human ENCAB655PST DNA False 2017-09-28 ENCODE 1 1 100 paired-ended 1 ENCFF385PER 3757080367 Michael Snyder, Stanford 8eb9c3d198b4ffe6a15484ceab2e4eb5 SRA:SRR6213857 https://www.encodeproject.org/files/ENCFF991XUU/@@download/ENCFF991XUU.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFF/ released antibody characterized with exemption ENCFF385PER fastq reads ENCSR491EBY ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARID2-human ENCAB655PST DNA False 2017-09-28 ENCODE 1 1 100 paired-ended 2 ENCFF991XUU 3751149613 Michael Snyder, Stanford f2bf89590af327a616a540f13dde15eb SRA:SRR6213857 https://www.encodeproject.org/files/ENCFF385PER/@@download/ENCFF385PER.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFH/ released antibody characterized with exemption ENCFF012LMN bam unfiltered alignments ENCSR491EBY ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARID2-human ENCAB655PST DNA False 2017-09-28 ENCODE 2 100 ENCFF272DKU, ENCFF643CGH, ENCFF808AUX 6458044954 ENCODE Processing Pipeline e5de6c5ebd62efbd35f9135c6a035441 https://www.encodeproject.org/files/ENCFF012LMN/@@download/ENCFF012LMN.bam GRCh38 released antibody characterized with exemption ENCFF267XGD bam alignments ENCSR491EBY ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARID2-human ENCAB655PST DNA False 2017-09-28 ENCODE 2 100 ENCFF272DKU, ENCFF643CGH, ENCFF808AUX 4995463580 ENCODE Processing Pipeline 985ab813d45fc5fc97688c7bfdaa50f1 https://www.encodeproject.org/files/ENCFF267XGD/@@download/ENCFF267XGD.bam GRCh38 released antibody characterized with exemption ENCFF682DSM bam unfiltered alignments ENCSR491EBY ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARID2-human ENCAB655PST DNA False 2017-09-28 ENCODE 1 100 ENCFF385PER, ENCFF643CGH, ENCFF991XUU 7961853415 ENCODE Processing Pipeline e3b373e3b0a475c42b7408924893ddfc https://www.encodeproject.org/files/ENCFF682DSM/@@download/ENCFF682DSM.bam GRCh38 released antibody characterized with exemption ENCFF037MZM bam alignments ENCSR491EBY ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARID2-human ENCAB655PST DNA False 2017-09-28 ENCODE 1 100 ENCFF385PER, ENCFF643CGH, ENCFF991XUU 6108274787 ENCODE Processing Pipeline dadde76d924a0aa32e14afe6980ff8b5 https://www.encodeproject.org/files/ENCFF037MZM/@@download/ENCFF037MZM.bam GRCh38 released antibody characterized with exemption ENCFF828AIQ bigWig fold change over control ENCSR491EBY ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARID2-human ENCAB655PST DNA False 2017-09-28 ENCODE 2 ENCFF227IZS, ENCFF267XGD 1218066168 ENCODE Processing Pipeline 9d5f03d3e499cdd680522d7187c54bed https://www.encodeproject.org/files/ENCFF828AIQ/@@download/ENCFF828AIQ.bigWig GRCh38 released antibody characterized with exemption ENCFF594AFR bigBed narrowPeak conservative idr thresholded peaks ENCSR491EBY ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARID2-human ENCAB655PST DNA False 2017-09-28 ENCODE 1, 2 ENCFF377AEV 313245 ENCODE Processing Pipeline 01654ffb1a7828bf7eca3bbc67e221c2 https://www.encodeproject.org/files/ENCFF594AFR/@@download/ENCFF594AFR.bigBed GRCh38 released antibody characterized with exemption ENCFF760BEM bigWig signal p-value ENCSR491EBY ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARID2-human ENCAB655PST DNA False 2017-09-28 ENCODE 1 ENCFF037MZM, ENCFF910IKB 1302567554 ENCODE Processing Pipeline 3c384d3629e05b5228dc4fc6798387af https://www.encodeproject.org/files/ENCFF760BEM/@@download/ENCFF760BEM.bigWig GRCh38 released antibody characterized with exemption ENCFF641JAT bigWig signal p-value ENCSR491EBY ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARID2-human ENCAB655PST DNA False 2017-09-28 ENCODE 2 ENCFF227IZS, ENCFF267XGD 1091813658 ENCODE Processing Pipeline 57bfbd1c11a4065657d143a6d22b197d https://www.encodeproject.org/files/ENCFF641JAT/@@download/ENCFF641JAT.bigWig GRCh38 released antibody characterized with exemption ENCFF587ZGZ bed narrowPeak peaks ENCSR491EBY ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARID2-human ENCAB655PST DNA False 2017-09-28 ENCODE 2 ENCFF227IZS, ENCFF267XGD 6604307 ENCODE Processing Pipeline c0ffa42859cc7d6922a6861c963ba551 https://www.encodeproject.org/files/ENCFF587ZGZ/@@download/ENCFF587ZGZ.bed.gz GRCh38 released antibody characterized with exemption ENCFF774HQT bed narrowPeak peaks ENCSR491EBY ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARID2-human ENCAB655PST DNA False 2017-09-28 ENCODE 1, 2 ENCFF037MZM, ENCFF227IZS, ENCFF267XGD, ENCFF910IKB 7249160 ENCODE Processing Pipeline 2b70178d56c04ae3f598ddad676b4ed0 https://www.encodeproject.org/files/ENCFF774HQT/@@download/ENCFF774HQT.bed.gz GRCh38 released antibody characterized with exemption ENCFF823JSO bigBed narrowPeak peaks ENCSR491EBY ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARID2-human ENCAB655PST DNA False 2017-09-28 ENCODE 1 ENCFF684MMR 11226885 ENCODE Processing Pipeline e13e255c562c8ae045b012d11b95a662 https://www.encodeproject.org/files/ENCFF823JSO/@@download/ENCFF823JSO.bigBed GRCh38 released antibody characterized with exemption ENCFF286OFS bigBed narrowPeak peaks ENCSR491EBY ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARID2-human ENCAB655PST DNA False 2017-09-28 ENCODE 2 ENCFF587ZGZ 13289337 ENCODE Processing Pipeline f516b1b9856ed52a163d9591198c9394 https://www.encodeproject.org/files/ENCFF286OFS/@@download/ENCFF286OFS.bigBed GRCh38 released antibody characterized with exemption ENCFF611GTD bigWig fold change over control ENCSR491EBY ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARID2-human ENCAB655PST DNA False 2017-09-28 ENCODE 1 ENCFF037MZM, ENCFF910IKB 1421412935 ENCODE Processing Pipeline 83e4cf62df7f4a68754591e1b98faefe https://www.encodeproject.org/files/ENCFF611GTD/@@download/ENCFF611GTD.bigWig GRCh38 released antibody characterized with exemption ENCFF344MKI bed narrowPeak optimal idr thresholded peaks ENCSR491EBY ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARID2-human ENCAB655PST DNA False 2017-09-28 ENCODE 1, 2 ENCFF419RSJ, ENCFF587ZGZ, ENCFF684MMR, ENCFF774HQT 222363 ENCODE Processing Pipeline 7fd96f224170a2e482976b73227b529d https://www.encodeproject.org/files/ENCFF344MKI/@@download/ENCFF344MKI.bed.gz GRCh38 released antibody characterized with exemption ENCFF835KBE bigWig fold change over control ENCSR491EBY ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARID2-human ENCAB655PST DNA False 2017-09-28 ENCODE 1, 2 ENCFF037MZM, ENCFF227IZS, ENCFF267XGD, ENCFF910IKB 2317452677 ENCODE Processing Pipeline 15fd51a80c1cbe9ba672a68de85d985c https://www.encodeproject.org/files/ENCFF835KBE/@@download/ENCFF835KBE.bigWig GRCh38 released antibody characterized with exemption ENCFF377AEV bed narrowPeak conservative idr thresholded peaks ENCSR491EBY ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARID2-human ENCAB655PST DNA False 2017-09-28 ENCODE 1, 2 ENCFF419RSJ, ENCFF587ZGZ, ENCFF684MMR, ENCFF774HQT 141101 ENCODE Processing Pipeline 270d78f72a2bbdf1561c36f6bdcd0b25 https://www.encodeproject.org/files/ENCFF377AEV/@@download/ENCFF377AEV.bed.gz GRCh38 released antibody characterized with exemption ENCFF344TRP bigBed narrowPeak optimal idr thresholded peaks ENCSR491EBY ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARID2-human ENCAB655PST DNA False 2017-09-28 ENCODE 1, 2 ENCFF344MKI 432206 ENCODE Processing Pipeline 16a5fd200068d1458bbdab2657682744 https://www.encodeproject.org/files/ENCFF344TRP/@@download/ENCFF344TRP.bigBed GRCh38 released antibody characterized with exemption ENCFF021TXP bigWig signal p-value ENCSR491EBY ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARID2-human ENCAB655PST DNA False 2017-09-28 ENCODE 1, 2 ENCFF037MZM, ENCFF227IZS, ENCFF267XGD, ENCFF910IKB 1802111347 ENCODE Processing Pipeline fa0ad2c9f45e7f5ee6328413f225f59e https://www.encodeproject.org/files/ENCFF021TXP/@@download/ENCFF021TXP.bigWig GRCh38 released antibody characterized with exemption ENCFF684MMR bed narrowPeak peaks ENCSR491EBY ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARID2-human ENCAB655PST DNA False 2017-09-28 ENCODE 1 ENCFF037MZM, ENCFF910IKB 6642279 ENCODE Processing Pipeline cc36d398bea9f8832f7abe8d497c703a https://www.encodeproject.org/files/ENCFF684MMR/@@download/ENCFF684MMR.bed.gz GRCh38 released antibody characterized with exemption ENCFF180JCL bigBed narrowPeak peaks ENCSR491EBY ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARID2-human ENCAB655PST DNA False 2017-09-28 ENCODE 1, 2 ENCFF774HQT 13232964 ENCODE Processing Pipeline 0c864dc338a3fefee759417d2922d3c0 https://www.encodeproject.org/files/ENCFF180JCL/@@download/ENCFF180JCL.bigBed GRCh38 released antibody characterized with exemption ENCFF095OQG bam unfiltered alignments ENCSR491EBY ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARID2-human ENCAB655PST DNA False 2017-09-28 ENCODE 2 100 ENCFF272DKU, ENCFF807MUK, ENCFF808AUX 6453862386 ENCODE Processing Pipeline 2e104425f5df4ce3e17d39bc5bf9c366 https://www.encodeproject.org/files/ENCFF095OQG/@@download/ENCFF095OQG.bam hg19 released antibody characterized with exemption ENCFF937PDQ bam unfiltered alignments ENCSR491EBY ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARID2-human ENCAB655PST DNA False 2017-09-28 ENCODE 1 100 ENCFF385PER, ENCFF807MUK, ENCFF991XUU 7956476411 ENCODE Processing Pipeline 19f3f37cf95a9a88b19f128713ff0510 https://www.encodeproject.org/files/ENCFF937PDQ/@@download/ENCFF937PDQ.bam hg19 released antibody characterized with exemption ENCFF669LOS bam alignments ENCSR491EBY ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARID2-human ENCAB655PST DNA False 2017-09-28 ENCODE 2 100 ENCFF272DKU, ENCFF807MUK, ENCFF808AUX 4992890604 ENCODE Processing Pipeline 60df4faac53280d1dc842188cabc37dc https://www.encodeproject.org/files/ENCFF669LOS/@@download/ENCFF669LOS.bam hg19 released antibody characterized with exemption ENCFF359SWY bam alignments ENCSR491EBY ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARID2-human ENCAB655PST DNA False 2017-09-28 ENCODE 1 100 ENCFF385PER, ENCFF807MUK, ENCFF991XUU 6103137889 ENCODE Processing Pipeline 877d7cf3233e35a5050c6e6bc55eacc5 https://www.encodeproject.org/files/ENCFF359SWY/@@download/ENCFF359SWY.bam hg19 released antibody characterized with exemption ENCFF525VEX bigWig signal p-value ENCSR491EBY ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARID2-human ENCAB655PST DNA False 2017-09-28 ENCODE 1 ENCFF359SWY, ENCFF581ZJL 1290630771 ENCODE Processing Pipeline a29f9b80ccfbec28ad9f58c5f7edc321 https://www.encodeproject.org/files/ENCFF525VEX/@@download/ENCFF525VEX.bigWig hg19 released antibody characterized with exemption ENCFF589UBD bigWig signal p-value ENCSR491EBY ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARID2-human ENCAB655PST DNA False 2017-09-28 ENCODE 1, 2 ENCFF051LWI, ENCFF359SWY, ENCFF581ZJL, ENCFF669LOS 1980154106 ENCODE Processing Pipeline d51cbc6f3c589114bab61bd23e0669dd https://www.encodeproject.org/files/ENCFF589UBD/@@download/ENCFF589UBD.bigWig hg19 released antibody characterized with exemption ENCFF080MKV bigWig fold change over control ENCSR491EBY ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARID2-human ENCAB655PST DNA False 2017-09-28 ENCODE 2 ENCFF051LWI, ENCFF669LOS 1216874588 ENCODE Processing Pipeline aed2f19bb7c8e31b830ef35857c487f1 https://www.encodeproject.org/files/ENCFF080MKV/@@download/ENCFF080MKV.bigWig hg19 released antibody characterized with exemption ENCFF055JYT bigWig signal p-value ENCSR491EBY ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARID2-human ENCAB655PST DNA False 2017-09-28 ENCODE 2 ENCFF051LWI, ENCFF669LOS 1027503042 ENCODE Processing Pipeline 3046502bf90bf554786c2ba60ded2b36 https://www.encodeproject.org/files/ENCFF055JYT/@@download/ENCFF055JYT.bigWig hg19 released antibody characterized with exemption ENCFF315YFC bigWig fold change over control ENCSR491EBY ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARID2-human ENCAB655PST DNA False 2017-09-28 ENCODE 1 ENCFF359SWY, ENCFF581ZJL 1426715249 ENCODE Processing Pipeline b8e49b62f393815ce13c90765d1adf29 https://www.encodeproject.org/files/ENCFF315YFC/@@download/ENCFF315YFC.bigWig hg19 released antibody characterized with exemption ENCFF232MAF bigWig fold change over control ENCSR491EBY ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARID2-human ENCAB655PST DNA False 2017-09-28 ENCODE 1, 2 ENCFF051LWI, ENCFF359SWY, ENCFF581ZJL, ENCFF669LOS 2297407700 ENCODE Processing Pipeline 91b82471d6158e35f9c49861a58336ac https://www.encodeproject.org/files/ENCFF232MAF/@@download/ENCFF232MAF.bigWig hg19 released antibody characterized with exemption ENCFF576BTO bed narrowPeak peaks ENCSR491EBY ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARID2-human ENCAB655PST DNA False 2017-09-28 ENCODE 1 ENCFF359SWY, ENCFF581ZJL 6637717 ENCODE Processing Pipeline 6588a2d0a029d0bb80a0e2cd4a096786 https://www.encodeproject.org/files/ENCFF576BTO/@@download/ENCFF576BTO.bed.gz hg19 released antibody characterized with exemption ENCFF828CXZ bed narrowPeak peaks ENCSR491EBY ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARID2-human ENCAB655PST DNA False 2017-09-28 ENCODE 2 ENCFF051LWI, ENCFF669LOS 6607514 ENCODE Processing Pipeline ffcb3b639ed32f8755e3898c3bbebd6f https://www.encodeproject.org/files/ENCFF828CXZ/@@download/ENCFF828CXZ.bed.gz hg19 released antibody characterized with exemption ENCFF749QSR bigBed narrowPeak peaks ENCSR491EBY ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARID2-human ENCAB655PST DNA False 2017-09-28 ENCODE 2 ENCFF828CXZ 13279763 ENCODE Processing Pipeline e2d47506112a56423de203402ce06a69 https://www.encodeproject.org/files/ENCFF749QSR/@@download/ENCFF749QSR.bigBed hg19 released antibody characterized with exemption ENCFF056IYP bed narrowPeak conservative idr thresholded peaks ENCSR491EBY ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARID2-human ENCAB655PST DNA False 2017-09-28 ENCODE 1, 2 ENCFF001TDO, ENCFF576BTO, ENCFF828CXZ, ENCFF989TPD 141885 ENCODE Processing Pipeline 4aee9a8718a074e0c121233a28679fbe https://www.encodeproject.org/files/ENCFF056IYP/@@download/ENCFF056IYP.bed.gz hg19 released antibody characterized with exemption ENCFF332ICQ bed narrowPeak optimal idr thresholded peaks ENCSR491EBY ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARID2-human ENCAB655PST DNA False 2017-09-28 ENCODE 1, 2 ENCFF001TDO, ENCFF576BTO, ENCFF828CXZ, ENCFF989TPD 219396 ENCODE Processing Pipeline 4716a1a4fe143684798d21330c0087b2 https://www.encodeproject.org/files/ENCFF332ICQ/@@download/ENCFF332ICQ.bed.gz hg19 released antibody characterized with exemption ENCFF423SVK bigBed narrowPeak conservative idr thresholded peaks ENCSR491EBY ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARID2-human ENCAB655PST DNA False 2017-09-28 ENCODE 1, 2 ENCFF056IYP 312331 ENCODE Processing Pipeline afa42474ce39870bca6e8a5ac194ddf1 https://www.encodeproject.org/files/ENCFF423SVK/@@download/ENCFF423SVK.bigBed hg19 released antibody characterized with exemption ENCFF567RSB bigBed narrowPeak optimal idr thresholded peaks ENCSR491EBY ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARID2-human ENCAB655PST DNA False 2017-09-28 ENCODE 1, 2 ENCFF332ICQ 425717 ENCODE Processing Pipeline 040603488064e34955b79a12b5d2f355 https://www.encodeproject.org/files/ENCFF567RSB/@@download/ENCFF567RSB.bigBed hg19 released antibody characterized with exemption ENCFF989TPD bed narrowPeak peaks ENCSR491EBY ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARID2-human ENCAB655PST DNA False 2017-09-28 ENCODE 1, 2 ENCFF051LWI, ENCFF359SWY, ENCFF581ZJL, ENCFF669LOS 7243359 ENCODE Processing Pipeline 0f531ff32e31e785da4579746adb3a97 https://www.encodeproject.org/files/ENCFF989TPD/@@download/ENCFF989TPD.bed.gz hg19 released antibody characterized with exemption ENCFF978TWK bigBed narrowPeak peaks ENCSR491EBY ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARID2-human ENCAB655PST DNA False 2017-09-28 ENCODE 1 ENCFF576BTO 11208764 ENCODE Processing Pipeline 6576cf58d588e734997e12836b4cb6f9 https://www.encodeproject.org/files/ENCFF978TWK/@@download/ENCFF978TWK.bigBed hg19 released antibody characterized with exemption ENCFF887YRX bigBed narrowPeak peaks ENCSR491EBY ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARID2-human ENCAB655PST DNA False 2017-09-28 ENCODE 1, 2 ENCFF989TPD 13216254 ENCODE Processing Pipeline ad7790bc041aa4468cbbdd1fb2debf3e https://www.encodeproject.org/files/ENCFF887YRX/@@download/ENCFF887YRX.bigBed hg19 released antibody characterized with exemption ENCFF454EYI fastq reads ENCSR076YPO ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB000BRJ DNA False 2016-03-30 ENCODE 2 1 50 single-ended 1376902784 Richard Myers, HAIB d1ff1485eb48deb9f783ca24bf473aea SRA:SRR5331226 https://www.encodeproject.org/files/ENCFF454EYI/@@download/ENCFF454EYI.fastq.gz Illumina HiSeq 2000 /files/ENCFF536LRX/ released borderline replicate concordance, low read depth ENCFF232WOY fastq reads ENCSR076YPO ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB000BRJ DNA False 2016-03-30 ENCODE 1 1 50 single-ended 1637161467 Richard Myers, HAIB 407f64cfd22a776e0c230f373c2e27fe SRA:SRR5331227 https://www.encodeproject.org/files/ENCFF232WOY/@@download/ENCFF232WOY.fastq.gz Illumina HiSeq 2000 /files/ENCFF913JVQ/ released borderline replicate concordance, low read depth ENCFF107VJA bam alignments ENCSR076YPO ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB000BRJ DNA False 2016-03-30 ENCODE 1 50 ENCFF232WOY, ENCFF807MUK 1310208680 ENCODE Processing Pipeline 25779f740041eb74083d794af4963c63 https://www.encodeproject.org/files/ENCFF107VJA/@@download/ENCFF107VJA.bam hg19 released borderline replicate concordance, low read depth ENCFF708IYO bam alignments ENCSR076YPO ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB000BRJ DNA False 2016-03-30 ENCODE 2 50 ENCFF454EYI, ENCFF807MUK 1165039842 ENCODE Processing Pipeline 1933f2cc439827f690a6bc477d4b6cbf https://www.encodeproject.org/files/ENCFF708IYO/@@download/ENCFF708IYO.bam hg19 released borderline replicate concordance, low read depth ENCFF877DYM bam unfiltered alignments ENCSR076YPO ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB000BRJ DNA False 2016-03-30 ENCODE 2 50 ENCFF454EYI, ENCFF643CGH 1503195194 ENCODE Processing Pipeline 6495391c3d1c9c47a3f8477728f8ca19 https://www.encodeproject.org/files/ENCFF877DYM/@@download/ENCFF877DYM.bam GRCh38 released borderline replicate concordance, low read depth ENCFF468FPM bam unfiltered alignments ENCSR076YPO ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB000BRJ DNA False 2016-03-30 ENCODE 1 50 ENCFF232WOY, ENCFF643CGH 1758259023 ENCODE Processing Pipeline 5c72be1533bf4f12afb0197841c10fb6 https://www.encodeproject.org/files/ENCFF468FPM/@@download/ENCFF468FPM.bam GRCh38 released borderline replicate concordance, low read depth ENCFF719XQY bam alignments ENCSR076YPO ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB000BRJ DNA False 2016-03-30 ENCODE 2 50 ENCFF454EYI, ENCFF643CGH 1164666225 ENCODE Processing Pipeline 0ee35c3100317ca2d4f4748598942809 https://www.encodeproject.org/files/ENCFF719XQY/@@download/ENCFF719XQY.bam GRCh38 released borderline replicate concordance, low read depth ENCFF544DDY bam alignments ENCSR076YPO ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB000BRJ DNA False 2016-03-30 ENCODE 1 50 ENCFF232WOY, ENCFF643CGH 1309680764 ENCODE Processing Pipeline 006db9dee42877afdf16dce0c20a5efc https://www.encodeproject.org/files/ENCFF544DDY/@@download/ENCFF544DDY.bam GRCh38 released borderline replicate concordance, low read depth ENCFF660KID bigWig signal p-value ENCSR076YPO ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB000BRJ DNA False 2016-03-30 ENCODE 1 ENCFF162ZOO, ENCFF544DDY 713062287 ENCODE Processing Pipeline 646c92d7ced7c03f98fa8450add1e5a6 https://www.encodeproject.org/files/ENCFF660KID/@@download/ENCFF660KID.bigWig GRCh38 released borderline replicate concordance, low read depth ENCFF630SVO bigWig signal p-value ENCSR076YPO ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB000BRJ DNA False 2016-03-30 ENCODE 2 ENCFF719XQY, ENCFF968UFH 671202614 ENCODE Processing Pipeline 13ec3fc56f0b0e2c836cb8560204f0ef https://www.encodeproject.org/files/ENCFF630SVO/@@download/ENCFF630SVO.bigWig GRCh38 released borderline replicate concordance, low read depth ENCFF838LIQ bigWig signal p-value ENCSR076YPO ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB000BRJ DNA False 2016-03-30 ENCODE 1, 2 ENCFF162ZOO, ENCFF544DDY, ENCFF719XQY, ENCFF968UFH 1277192286 ENCODE Processing Pipeline 47118af05c49be50cffb73b92a19b895 https://www.encodeproject.org/files/ENCFF838LIQ/@@download/ENCFF838LIQ.bigWig GRCh38 released borderline replicate concordance, low read depth ENCFF418YSU bigWig fold change over control ENCSR076YPO ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB000BRJ DNA False 2016-03-30 ENCODE 1 ENCFF162ZOO, ENCFF544DDY 596529877 ENCODE Processing Pipeline 9976ff88988dccd597a70424655ab239 https://www.encodeproject.org/files/ENCFF418YSU/@@download/ENCFF418YSU.bigWig GRCh38 released borderline replicate concordance, low read depth ENCFF219VGB bigWig fold change over control ENCSR076YPO ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB000BRJ DNA False 2016-03-30 ENCODE 2 ENCFF719XQY, ENCFF968UFH 550379277 ENCODE Processing Pipeline fa82f6e5070b42f2e649e7286cb8b658 https://www.encodeproject.org/files/ENCFF219VGB/@@download/ENCFF219VGB.bigWig GRCh38 released borderline replicate concordance, low read depth ENCFF657DIW bigWig fold change over control ENCSR076YPO ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB000BRJ DNA False 2016-03-30 ENCODE 1, 2 ENCFF162ZOO, ENCFF544DDY, ENCFF719XQY, ENCFF968UFH 1209509430 ENCODE Processing Pipeline 1b4728345f0b03c1f513ac47d409cb98 https://www.encodeproject.org/files/ENCFF657DIW/@@download/ENCFF657DIW.bigWig GRCh38 released borderline replicate concordance, low read depth ENCFF718ZLW bed narrowPeak peaks ENCSR076YPO ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB000BRJ DNA False 2016-03-30 ENCODE 2 ENCFF719XQY, ENCFF968UFH 5768360 ENCODE Processing Pipeline f1f68f95d037e8c649e5ad40f57950a8 https://www.encodeproject.org/files/ENCFF718ZLW/@@download/ENCFF718ZLW.bed.gz GRCh38 released borderline replicate concordance, low read depth ENCFF243IIV bigBed narrowPeak peaks ENCSR076YPO ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB000BRJ DNA False 2016-03-30 ENCODE 2 ENCFF718ZLW 13166722 ENCODE Processing Pipeline 0189c8528767f2fc61a2f1fc1591a651 https://www.encodeproject.org/files/ENCFF243IIV/@@download/ENCFF243IIV.bigBed GRCh38 released borderline replicate concordance, low read depth ENCFF070FHF bigBed narrowPeak peaks ENCSR076YPO ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB000BRJ DNA False 2016-03-30 ENCODE 1 ENCFF515RUZ 13076381 ENCODE Processing Pipeline 52e6abc6aa0fb9d6affb7ba5d1842c3b https://www.encodeproject.org/files/ENCFF070FHF/@@download/ENCFF070FHF.bigBed GRCh38 released borderline replicate concordance, low read depth ENCFF105RJJ bed narrowPeak peaks ENCSR076YPO ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB000BRJ DNA False 2016-03-30 ENCODE 1, 2 ENCFF162ZOO, ENCFF544DDY, ENCFF719XQY, ENCFF968UFH 7003878 ENCODE Processing Pipeline dce07d13585a7349b2ed2cb6584240cc https://www.encodeproject.org/files/ENCFF105RJJ/@@download/ENCFF105RJJ.bed.gz GRCh38 released borderline replicate concordance, low read depth ENCFF515RUZ bed narrowPeak peaks ENCSR076YPO ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB000BRJ DNA False 2016-03-30 ENCODE 1 ENCFF162ZOO, ENCFF544DDY 6431040 ENCODE Processing Pipeline 0c755a6f2bb9135aa0a3421567c13e9c https://www.encodeproject.org/files/ENCFF515RUZ/@@download/ENCFF515RUZ.bed.gz GRCh38 released borderline replicate concordance, low read depth ENCFF290BTM bigBed narrowPeak peaks ENCSR076YPO ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB000BRJ DNA False 2016-03-30 ENCODE 1, 2 ENCFF105RJJ 13238850 ENCODE Processing Pipeline fd59222eea71e6ce1a4bb98c515e013f https://www.encodeproject.org/files/ENCFF290BTM/@@download/ENCFF290BTM.bigBed GRCh38 released borderline replicate concordance, low read depth ENCFF402SQA bigBed narrowPeak conservative idr thresholded peaks ENCSR076YPO ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB000BRJ DNA False 2016-03-30 ENCODE 1, 2 ENCFF666MKU 349005 ENCODE Processing Pipeline 02ede845629758f3e3c42ed8955903de https://www.encodeproject.org/files/ENCFF402SQA/@@download/ENCFF402SQA.bigBed GRCh38 released borderline replicate concordance, low read depth ENCFF666MKU bed narrowPeak conservative idr thresholded peaks ENCSR076YPO ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB000BRJ DNA False 2016-03-30 ENCODE 1, 2 ENCFF105RJJ, ENCFF419RSJ, ENCFF515RUZ, ENCFF718ZLW 165150 ENCODE Processing Pipeline dfec03e4332932d52d1345a1eec18895 https://www.encodeproject.org/files/ENCFF666MKU/@@download/ENCFF666MKU.bed.gz GRCh38 released borderline replicate concordance, low read depth ENCFF309AID bigBed narrowPeak optimal idr thresholded peaks ENCSR076YPO ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB000BRJ DNA False 2016-03-30 ENCODE 1, 2 ENCFF741CLJ 655348 ENCODE Processing Pipeline cda00ad0694c70f66bdd406bafa3a0d2 https://www.encodeproject.org/files/ENCFF309AID/@@download/ENCFF309AID.bigBed GRCh38 released borderline replicate concordance, low read depth ENCFF741CLJ bed narrowPeak optimal idr thresholded peaks ENCSR076YPO ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB000BRJ DNA False 2016-03-30 ENCODE 1, 2 ENCFF105RJJ, ENCFF419RSJ, ENCFF515RUZ, ENCFF718ZLW 303753 ENCODE Processing Pipeline fd614180ded8d33a00c702f5fc83e723 https://www.encodeproject.org/files/ENCFF741CLJ/@@download/ENCFF741CLJ.bed.gz GRCh38 released borderline replicate concordance, low read depth ENCFF789KSW bam unfiltered alignments ENCSR076YPO ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB000BRJ DNA False 2016-03-30 ENCODE 1 50 ENCFF232WOY, ENCFF807MUK 1752580791 ENCODE Processing Pipeline 5a00ddc82303eaa60cd1e64f123e8547 https://www.encodeproject.org/files/ENCFF789KSW/@@download/ENCFF789KSW.bam hg19 released borderline replicate concordance, low read depth ENCFF452MYV bam unfiltered alignments ENCSR076YPO ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB000BRJ DNA False 2016-03-30 ENCODE 2 50 ENCFF454EYI, ENCFF807MUK 1500118592 ENCODE Processing Pipeline 6fe022223da7e40e465ba6485026db63 https://www.encodeproject.org/files/ENCFF452MYV/@@download/ENCFF452MYV.bam hg19 released borderline replicate concordance, low read depth ENCFF821GMK bigWig signal p-value ENCSR076YPO ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB000BRJ DNA False 2016-03-30 ENCODE 1 ENCFF107VJA, ENCFF444TNY 764802479 ENCODE Processing Pipeline fe98432f49be40f5964de182914aa08a https://www.encodeproject.org/files/ENCFF821GMK/@@download/ENCFF821GMK.bigWig hg19 released borderline replicate concordance, low read depth ENCFF844TQX bed narrowPeak peaks ENCSR076YPO ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB000BRJ DNA False 2016-03-30 ENCODE 1 ENCFF107VJA, ENCFF444TNY 6439920 ENCODE Processing Pipeline 282e4782f8494d85976bcf5d26aef0a7 https://www.encodeproject.org/files/ENCFF844TQX/@@download/ENCFF844TQX.bed.gz hg19 released borderline replicate concordance, low read depth ENCFF258FWL bigWig fold change over control ENCSR076YPO ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB000BRJ DNA False 2016-03-30 ENCODE 1 ENCFF107VJA, ENCFF444TNY 594205650 ENCODE Processing Pipeline 2e640b56540a58fb594973cc7560589b https://www.encodeproject.org/files/ENCFF258FWL/@@download/ENCFF258FWL.bigWig hg19 released borderline replicate concordance, low read depth ENCFF570BQM bigWig signal p-value ENCSR076YPO ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB000BRJ DNA False 2016-03-30 ENCODE 1, 2 ENCFF082GBO, ENCFF107VJA, ENCFF444TNY, ENCFF708IYO 1400223074 ENCODE Processing Pipeline 1b9fc624c8753508c4fc350c49a6342b https://www.encodeproject.org/files/ENCFF570BQM/@@download/ENCFF570BQM.bigWig hg19 released borderline replicate concordance, low read depth ENCFF820ZTK bed narrowPeak peaks ENCSR076YPO ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB000BRJ DNA False 2016-03-30 ENCODE 2 ENCFF082GBO, ENCFF708IYO 5560359 ENCODE Processing Pipeline f8f01706849c4eee56860e0693bd4143 https://www.encodeproject.org/files/ENCFF820ZTK/@@download/ENCFF820ZTK.bed.gz hg19 released borderline replicate concordance, low read depth ENCFF576LFG bed narrowPeak peaks ENCSR076YPO ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB000BRJ DNA False 2016-03-30 ENCODE 1, 2 ENCFF082GBO, ENCFF107VJA, ENCFF444TNY, ENCFF708IYO 6999284 ENCODE Processing Pipeline 24ec94b58a385ffd60d08cb75a51c5b3 https://www.encodeproject.org/files/ENCFF576LFG/@@download/ENCFF576LFG.bed.gz hg19 released borderline replicate concordance, low read depth ENCFF093TWU bigBed narrowPeak peaks ENCSR076YPO ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB000BRJ DNA False 2016-03-30 ENCODE 1 ENCFF844TQX 13056797 ENCODE Processing Pipeline e1476f78228f5335e4359f21f6e76b99 https://www.encodeproject.org/files/ENCFF093TWU/@@download/ENCFF093TWU.bigBed hg19 released borderline replicate concordance, low read depth ENCFF234PWC bigWig fold change over control ENCSR076YPO ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB000BRJ DNA False 2016-03-30 ENCODE 2 ENCFF082GBO, ENCFF708IYO 552460120 ENCODE Processing Pipeline cde38b2ca6b9d2db90117479592cff78 https://www.encodeproject.org/files/ENCFF234PWC/@@download/ENCFF234PWC.bigWig hg19 released borderline replicate concordance, low read depth ENCFF513CNT bed narrowPeak conservative idr thresholded peaks ENCSR076YPO ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB000BRJ DNA False 2016-03-30 ENCODE 1, 2 ENCFF001TDO, ENCFF576LFG, ENCFF820ZTK, ENCFF844TQX 165635 ENCODE Processing Pipeline 3db56811c1a96845e566ea81b37416ed https://www.encodeproject.org/files/ENCFF513CNT/@@download/ENCFF513CNT.bed.gz hg19 released borderline replicate concordance, low read depth ENCFF359ZYF bigBed narrowPeak conservative idr thresholded peaks ENCSR076YPO ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB000BRJ DNA False 2016-03-30 ENCODE 1, 2 ENCFF513CNT 349026 ENCODE Processing Pipeline bac2a5aabc40e036f30cb844a7756f42 https://www.encodeproject.org/files/ENCFF359ZYF/@@download/ENCFF359ZYF.bigBed hg19 released borderline replicate concordance, low read depth ENCFF883CBQ bigWig signal p-value ENCSR076YPO ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB000BRJ DNA False 2016-03-30 ENCODE 2 ENCFF082GBO, ENCFF708IYO 626586590 ENCODE Processing Pipeline e1cf843392550497cf9dff7b972be8d6 https://www.encodeproject.org/files/ENCFF883CBQ/@@download/ENCFF883CBQ.bigWig hg19 released borderline replicate concordance, low read depth ENCFF857HEZ bigWig fold change over control ENCSR076YPO ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB000BRJ DNA False 2016-03-30 ENCODE 1, 2 ENCFF082GBO, ENCFF107VJA, ENCFF444TNY, ENCFF708IYO 1232371252 ENCODE Processing Pipeline 86ca61ac680c47c1f2cddeee0a5fcb0d https://www.encodeproject.org/files/ENCFF857HEZ/@@download/ENCFF857HEZ.bigWig hg19 released borderline replicate concordance, low read depth ENCFF281BEC bigBed narrowPeak peaks ENCSR076YPO ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB000BRJ DNA False 2016-03-30 ENCODE 2 ENCFF820ZTK 13096803 ENCODE Processing Pipeline f4d1527486ca9cea512644bb4cf8c0f4 https://www.encodeproject.org/files/ENCFF281BEC/@@download/ENCFF281BEC.bigBed hg19 released borderline replicate concordance, low read depth ENCFF993ILX bigBed narrowPeak peaks ENCSR076YPO ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB000BRJ DNA False 2016-03-30 ENCODE 1, 2 ENCFF576LFG 13234410 ENCODE Processing Pipeline 87d018cb32106bd08e459482a7ebf390 https://www.encodeproject.org/files/ENCFF993ILX/@@download/ENCFF993ILX.bigBed hg19 released borderline replicate concordance, low read depth ENCFF972LPT bed narrowPeak optimal idr thresholded peaks ENCSR076YPO ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB000BRJ DNA False 2016-03-30 ENCODE 1, 2 ENCFF001TDO, ENCFF576LFG, ENCFF820ZTK, ENCFF844TQX 305539 ENCODE Processing Pipeline 1563fb6abad7b6e01e1a4b592835b343 https://www.encodeproject.org/files/ENCFF972LPT/@@download/ENCFF972LPT.bed.gz hg19 released borderline replicate concordance, low read depth ENCFF578SVX bigBed narrowPeak optimal idr thresholded peaks ENCSR076YPO ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB000BRJ DNA False 2016-03-30 ENCODE 1, 2 ENCFF972LPT 657998 ENCODE Processing Pipeline 2008e277d1642e83eaa1c6d01d55be17 https://www.encodeproject.org/files/ENCFF578SVX/@@download/ENCFF578SVX.bigBed hg19 released borderline replicate concordance, low read depth ENCFF553DAZ bam unfiltered alignments ENCSR588AKU ChIP-seq EFO:0002067 K562 cell line Homo sapiens RUNX1-human ENCAB000BIM DNA False 2016-03-31 ENCODE 2 50 ENCFF515YST, ENCFF807MUK 1657703113 ENCODE Processing Pipeline 73ae0030e5f6d67346e7ac2694d1d10c https://www.encodeproject.org/files/ENCFF553DAZ/@@download/ENCFF553DAZ.bam hg19 released low read depth, antibody characterized with exemption ENCFF676CXB bam unfiltered alignments ENCSR588AKU ChIP-seq EFO:0002067 K562 cell line Homo sapiens RUNX1-human ENCAB000BIM DNA False 2016-03-31 ENCODE 1 50 ENCFF644JIO, ENCFF807MUK 1298346687 ENCODE Processing Pipeline 68a93e870f4994f6e983e2cebd362214 https://www.encodeproject.org/files/ENCFF676CXB/@@download/ENCFF676CXB.bam hg19 released low read depth, antibody characterized with exemption ENCFF768XDX bigBed narrowPeak conservative idr thresholded peaks ENCSR588AKU ChIP-seq EFO:0002067 K562 cell line Homo sapiens RUNX1-human ENCAB000BIM DNA False 2016-03-31 ENCODE 1, 2 ENCFF259VDF 169384 ENCODE Processing Pipeline 38272474c2a608403646128958f3b069 https://www.encodeproject.org/files/ENCFF768XDX/@@download/ENCFF768XDX.bigBed hg19 released low read depth, antibody characterized with exemption ENCFF689EEG bed narrowPeak peaks ENCSR588AKU ChIP-seq EFO:0002067 K562 cell line Homo sapiens RUNX1-human ENCAB000BIM DNA False 2016-03-31 ENCODE 1, 2 ENCFF023YMB, ENCFF092ACZ, ENCFF391CGQ, ENCFF892CVA 6921393 ENCODE Processing Pipeline 852de3d3ed7602a4512d2f72f290398e https://www.encodeproject.org/files/ENCFF689EEG/@@download/ENCFF689EEG.bed.gz hg19 released low read depth, antibody characterized with exemption ENCFF982USG bigBed narrowPeak peaks ENCSR588AKU ChIP-seq EFO:0002067 K562 cell line Homo sapiens RUNX1-human ENCAB000BIM DNA False 2016-03-31 ENCODE 1 ENCFF011EFB 10966563 ENCODE Processing Pipeline d625a4c198df6696f584540afb3f92e1 https://www.encodeproject.org/files/ENCFF982USG/@@download/ENCFF982USG.bigBed hg19 released low read depth, antibody characterized with exemption ENCFF147WNH bigBed narrowPeak peaks ENCSR588AKU ChIP-seq EFO:0002067 K562 cell line Homo sapiens RUNX1-human ENCAB000BIM DNA False 2016-03-31 ENCODE 1, 2 ENCFF689EEG 13197172 ENCODE Processing Pipeline 00b033b575a7e9a18d077f84ac8c929c https://www.encodeproject.org/files/ENCFF147WNH/@@download/ENCFF147WNH.bigBed hg19 released low read depth, antibody characterized with exemption ENCFF341RWZ bigBed narrowPeak optimal idr thresholded peaks ENCSR588AKU ChIP-seq EFO:0002067 K562 cell line Homo sapiens RUNX1-human ENCAB000BIM DNA False 2016-03-31 ENCODE 1, 2 ENCFF422BXE 187715 ENCODE Processing Pipeline 39181a57a9caa8bb0c069e418196b5e5 https://www.encodeproject.org/files/ENCFF341RWZ/@@download/ENCFF341RWZ.bigBed hg19 released low read depth, antibody characterized with exemption ENCFF903KVY bigWig signal p-value ENCSR588AKU ChIP-seq EFO:0002067 K562 cell line Homo sapiens RUNX1-human ENCAB000BIM DNA False 2016-03-31 ENCODE 1, 2 ENCFF023YMB, ENCFF092ACZ, ENCFF391CGQ, ENCFF892CVA 1020531417 ENCODE Processing Pipeline ca18a0eaedcb9e9153c9659731e09148 https://www.encodeproject.org/files/ENCFF903KVY/@@download/ENCFF903KVY.bigWig hg19 released low read depth, antibody characterized with exemption ENCFF962DJQ bigWig fold change over control ENCSR588AKU ChIP-seq EFO:0002067 K562 cell line Homo sapiens RUNX1-human ENCAB000BIM DNA False 2016-03-31 ENCODE 1, 2 ENCFF023YMB, ENCFF092ACZ, ENCFF391CGQ, ENCFF892CVA 955128826 ENCODE Processing Pipeline 89641e9c47d9e4a4e043d97b95af4a74 https://www.encodeproject.org/files/ENCFF962DJQ/@@download/ENCFF962DJQ.bigWig hg19 released low read depth, antibody characterized with exemption ENCFF259VDF bed narrowPeak conservative idr thresholded peaks ENCSR588AKU ChIP-seq EFO:0002067 K562 cell line Homo sapiens RUNX1-human ENCAB000BIM DNA False 2016-03-31 ENCODE 1, 2 ENCFF001TDO, ENCFF011EFB, ENCFF206UIN, ENCFF689EEG 56631 ENCODE Processing Pipeline 2b0ee616f58502d727bc038518aa7e0c https://www.encodeproject.org/files/ENCFF259VDF/@@download/ENCFF259VDF.bed.gz hg19 released low read depth, antibody characterized with exemption ENCFF011EFB bed narrowPeak peaks ENCSR588AKU ChIP-seq EFO:0002067 K562 cell line Homo sapiens RUNX1-human ENCAB000BIM DNA False 2016-03-31 ENCODE 1 ENCFF023YMB, ENCFF391CGQ 5422867 ENCODE Processing Pipeline 3bcd5f121b6f622b8ea4fb2fa089e04d https://www.encodeproject.org/files/ENCFF011EFB/@@download/ENCFF011EFB.bed.gz hg19 released low read depth, antibody characterized with exemption ENCFF206UIN bed narrowPeak peaks ENCSR588AKU ChIP-seq EFO:0002067 K562 cell line Homo sapiens RUNX1-human ENCAB000BIM DNA False 2016-03-31 ENCODE 2 ENCFF092ACZ, ENCFF892CVA 5905358 ENCODE Processing Pipeline 2b36d9bac13bba57a31bcc0042bc5d80 https://www.encodeproject.org/files/ENCFF206UIN/@@download/ENCFF206UIN.bed.gz hg19 released low read depth, antibody characterized with exemption ENCFF535RVH bigBed narrowPeak peaks ENCSR588AKU ChIP-seq EFO:0002067 K562 cell line Homo sapiens RUNX1-human ENCAB000BIM DNA False 2016-03-31 ENCODE 2 ENCFF206UIN 13207264 ENCODE Processing Pipeline 847e3556428f996ec5e913c70820a8c0 https://www.encodeproject.org/files/ENCFF535RVH/@@download/ENCFF535RVH.bigBed hg19 released low read depth, antibody characterized with exemption ENCFF422BXE bed narrowPeak optimal idr thresholded peaks ENCSR588AKU ChIP-seq EFO:0002067 K562 cell line Homo sapiens RUNX1-human ENCAB000BIM DNA False 2016-03-31 ENCODE 1, 2 ENCFF001TDO, ENCFF011EFB, ENCFF206UIN, ENCFF689EEG 67757 ENCODE Processing Pipeline e97fc8a7872ed1a2adc9f51836bb71e1 https://www.encodeproject.org/files/ENCFF422BXE/@@download/ENCFF422BXE.bed.gz hg19 released low read depth, antibody characterized with exemption ENCFF515YST fastq reads ENCSR588AKU ChIP-seq EFO:0002067 K562 cell line Homo sapiens RUNX1-human ENCAB000BIM DNA False 2016-03-31 ENCODE 2 1 50 single-ended 1539561612 Richard Myers, HAIB 33670742be9480e9ce99e8da7efce1c2 SRA:SRR5338965 https://www.encodeproject.org/files/ENCFF515YST/@@download/ENCFF515YST.fastq.gz Illumina HiSeq 2000 /files/ENCFF002BGB/ released low read depth, antibody characterized with exemption ENCFF644JIO fastq reads ENCSR588AKU ChIP-seq EFO:0002067 K562 cell line Homo sapiens RUNX1-human ENCAB000BIM DNA False 2016-03-31 ENCODE 1 1 50 single-ended 1186636132 Richard Myers, HAIB 71999396ce8452e8ed4d17f3db768d1d SRA:SRR5338964 https://www.encodeproject.org/files/ENCFF644JIO/@@download/ENCFF644JIO.fastq.gz Illumina HiSeq 2000 /files/ENCFF002BGC/ released low read depth, antibody characterized with exemption ENCFF391CGQ bam alignments ENCSR588AKU ChIP-seq EFO:0002067 K562 cell line Homo sapiens RUNX1-human ENCAB000BIM DNA False 2016-03-31 ENCODE 1 50 ENCFF644JIO, ENCFF807MUK 975414658 ENCODE Processing Pipeline ed8f8fc0178028b2ef565a769a1f6f25 https://www.encodeproject.org/files/ENCFF391CGQ/@@download/ENCFF391CGQ.bam hg19 released low read depth, antibody characterized with exemption ENCFF892CVA bam alignments ENCSR588AKU ChIP-seq EFO:0002067 K562 cell line Homo sapiens RUNX1-human ENCAB000BIM DNA False 2016-03-31 ENCODE 2 50 ENCFF515YST, ENCFF807MUK 1202776767 ENCODE Processing Pipeline eedbe083eb9d66ae986e0c249c31b829 https://www.encodeproject.org/files/ENCFF892CVA/@@download/ENCFF892CVA.bam hg19 released low read depth, antibody characterized with exemption ENCFF217LOT bigWig fold change over control ENCSR588AKU ChIP-seq EFO:0002067 K562 cell line Homo sapiens RUNX1-human ENCAB000BIM DNA False 2016-03-31 ENCODE 1 ENCFF023YMB, ENCFF391CGQ 411464311 ENCODE Processing Pipeline 04914c008f47bedd52dfade2e9b47fe5 https://www.encodeproject.org/files/ENCFF217LOT/@@download/ENCFF217LOT.bigWig hg19 released low read depth, antibody characterized with exemption ENCFF908OKZ bigWig signal p-value ENCSR588AKU ChIP-seq EFO:0002067 K562 cell line Homo sapiens RUNX1-human ENCAB000BIM DNA False 2016-03-31 ENCODE 1 ENCFF023YMB, ENCFF391CGQ 609117254 ENCODE Processing Pipeline 3e144f733eff1f54c48d981c7781d31b https://www.encodeproject.org/files/ENCFF908OKZ/@@download/ENCFF908OKZ.bigWig hg19 released low read depth, antibody characterized with exemption ENCFF281EQZ bigWig signal p-value ENCSR588AKU ChIP-seq EFO:0002067 K562 cell line Homo sapiens RUNX1-human ENCAB000BIM DNA False 2016-03-31 ENCODE 2 ENCFF092ACZ, ENCFF892CVA 676342354 ENCODE Processing Pipeline b46c4ab074bd1e5d099f57cbcc9e225f https://www.encodeproject.org/files/ENCFF281EQZ/@@download/ENCFF281EQZ.bigWig hg19 released low read depth, antibody characterized with exemption ENCFF736QLP bigWig fold change over control ENCSR588AKU ChIP-seq EFO:0002067 K562 cell line Homo sapiens RUNX1-human ENCAB000BIM DNA False 2016-03-31 ENCODE 2 ENCFF092ACZ, ENCFF892CVA 488867918 ENCODE Processing Pipeline 1de5e738021e6a011a2742884829af12 https://www.encodeproject.org/files/ENCFF736QLP/@@download/ENCFF736QLP.bigWig hg19 released low read depth, antibody characterized with exemption ENCFF497WWQ bam unfiltered alignments ENCSR588AKU ChIP-seq EFO:0002067 K562 cell line Homo sapiens RUNX1-human ENCAB000BIM DNA False 2016-03-31 ENCODE 1 50 ENCFF643CGH, ENCFF644JIO 1300934913 ENCODE Processing Pipeline b309361282da0a7f852f2da892b3ded9 https://www.encodeproject.org/files/ENCFF497WWQ/@@download/ENCFF497WWQ.bam GRCh38 released low read depth, antibody characterized with exemption ENCFF280MYH bam unfiltered alignments ENCSR588AKU ChIP-seq EFO:0002067 K562 cell line Homo sapiens RUNX1-human ENCAB000BIM DNA False 2016-03-31 ENCODE 2 50 ENCFF515YST, ENCFF643CGH 1662701792 ENCODE Processing Pipeline e4ffb8ecbccbb5b4f644c06802533e6a https://www.encodeproject.org/files/ENCFF280MYH/@@download/ENCFF280MYH.bam GRCh38 released low read depth, antibody characterized with exemption ENCFF011XRF bam alignments ENCSR588AKU ChIP-seq EFO:0002067 K562 cell line Homo sapiens RUNX1-human ENCAB000BIM DNA False 2016-03-31 ENCODE 1 50 ENCFF643CGH, ENCFF644JIO 975007019 ENCODE Processing Pipeline 15d5e4c080f760145489bb7b69c3a5db https://www.encodeproject.org/files/ENCFF011XRF/@@download/ENCFF011XRF.bam GRCh38 released low read depth, antibody characterized with exemption ENCFF812KIP bam alignments ENCSR588AKU ChIP-seq EFO:0002067 K562 cell line Homo sapiens RUNX1-human ENCAB000BIM DNA False 2016-03-31 ENCODE 2 50 ENCFF515YST, ENCFF643CGH 1202267595 ENCODE Processing Pipeline 14f84bc03e5a78a95522f7770431b0aa https://www.encodeproject.org/files/ENCFF812KIP/@@download/ENCFF812KIP.bam GRCh38 released low read depth, antibody characterized with exemption ENCFF472QBL bigWig signal p-value ENCSR588AKU ChIP-seq EFO:0002067 K562 cell line Homo sapiens RUNX1-human ENCAB000BIM DNA False 2016-03-31 ENCODE 1 ENCFF011XRF, ENCFF709XAA 553089199 ENCODE Processing Pipeline 20432fa59f6b5d8a62f4c43d524b60ec https://www.encodeproject.org/files/ENCFF472QBL/@@download/ENCFF472QBL.bigWig GRCh38 released low read depth, antibody characterized with exemption ENCFF796KDJ bigWig signal p-value ENCSR588AKU ChIP-seq EFO:0002067 K562 cell line Homo sapiens RUNX1-human ENCAB000BIM DNA False 2016-03-31 ENCODE 2 ENCFF285EWB, ENCFF812KIP 561963349 ENCODE Processing Pipeline 6b6d2def18c139dde1a51eb3450cb268 https://www.encodeproject.org/files/ENCFF796KDJ/@@download/ENCFF796KDJ.bigWig GRCh38 released low read depth, antibody characterized with exemption ENCFF198AJC bigWig signal p-value ENCSR588AKU ChIP-seq EFO:0002067 K562 cell line Homo sapiens RUNX1-human ENCAB000BIM DNA False 2016-03-31 ENCODE 1, 2 ENCFF011XRF, ENCFF285EWB, ENCFF709XAA, ENCFF812KIP 1034774088 ENCODE Processing Pipeline e5a708fcdfed961fa742cd8983294244 https://www.encodeproject.org/files/ENCFF198AJC/@@download/ENCFF198AJC.bigWig GRCh38 released low read depth, antibody characterized with exemption ENCFF410VFY bigWig fold change over control ENCSR588AKU ChIP-seq EFO:0002067 K562 cell line Homo sapiens RUNX1-human ENCAB000BIM DNA False 2016-03-31 ENCODE 1 ENCFF011XRF, ENCFF709XAA 410942731 ENCODE Processing Pipeline 2889c2aca4f5e3037e5e36d78f9c3f3c https://www.encodeproject.org/files/ENCFF410VFY/@@download/ENCFF410VFY.bigWig GRCh38 released low read depth, antibody characterized with exemption ENCFF604SPG bigWig fold change over control ENCSR588AKU ChIP-seq EFO:0002067 K562 cell line Homo sapiens RUNX1-human ENCAB000BIM DNA False 2016-03-31 ENCODE 2 ENCFF285EWB, ENCFF812KIP 492106588 ENCODE Processing Pipeline 75c32d6d44e558fed10c5e2e20cc69a6 https://www.encodeproject.org/files/ENCFF604SPG/@@download/ENCFF604SPG.bigWig GRCh38 released low read depth, antibody characterized with exemption ENCFF185TTH bigWig fold change over control ENCSR588AKU ChIP-seq EFO:0002067 K562 cell line Homo sapiens RUNX1-human ENCAB000BIM DNA False 2016-03-31 ENCODE 1, 2 ENCFF011XRF, ENCFF285EWB, ENCFF709XAA, ENCFF812KIP 996114127 ENCODE Processing Pipeline 355adcc96b51329a77621556eb2ef84f https://www.encodeproject.org/files/ENCFF185TTH/@@download/ENCFF185TTH.bigWig GRCh38 released low read depth, antibody characterized with exemption ENCFF157SQN bed narrowPeak peaks ENCSR588AKU ChIP-seq EFO:0002067 K562 cell line Homo sapiens RUNX1-human ENCAB000BIM DNA False 2016-03-31 ENCODE 2 ENCFF285EWB, ENCFF812KIP 5841730 ENCODE Processing Pipeline effa89adbba74efcd57568b3796df7c9 https://www.encodeproject.org/files/ENCFF157SQN/@@download/ENCFF157SQN.bed.gz GRCh38 released low read depth, antibody characterized with exemption ENCFF246VDU bed narrowPeak peaks ENCSR588AKU ChIP-seq EFO:0002067 K562 cell line Homo sapiens RUNX1-human ENCAB000BIM DNA False 2016-03-31 ENCODE 1 ENCFF011XRF, ENCFF709XAA 5331491 ENCODE Processing Pipeline 547153566bb601110b982ec6211d9a1b https://www.encodeproject.org/files/ENCFF246VDU/@@download/ENCFF246VDU.bed.gz GRCh38 released low read depth, antibody characterized with exemption ENCFF560AQD bed narrowPeak peaks ENCSR588AKU ChIP-seq EFO:0002067 K562 cell line Homo sapiens RUNX1-human ENCAB000BIM DNA False 2016-03-31 ENCODE 1, 2 ENCFF011XRF, ENCFF285EWB, ENCFF709XAA, ENCFF812KIP 6903840 ENCODE Processing Pipeline e6f01f1ac4b374a039812285aca29452 https://www.encodeproject.org/files/ENCFF560AQD/@@download/ENCFF560AQD.bed.gz GRCh38 released low read depth, antibody characterized with exemption ENCFF324JON bigBed narrowPeak conservative idr thresholded peaks ENCSR588AKU ChIP-seq EFO:0002067 K562 cell line Homo sapiens RUNX1-human ENCAB000BIM DNA False 2016-03-31 ENCODE 1, 2 ENCFF049YPY 143881 ENCODE Processing Pipeline 6982cbcd950ac3771ce574d96800acbd https://www.encodeproject.org/files/ENCFF324JON/@@download/ENCFF324JON.bigBed GRCh38 released low read depth, antibody characterized with exemption ENCFF867UFX bigBed narrowPeak peaks ENCSR588AKU ChIP-seq EFO:0002067 K562 cell line Homo sapiens RUNX1-human ENCAB000BIM DNA False 2016-03-31 ENCODE 2 ENCFF157SQN 13209974 ENCODE Processing Pipeline 4e1c99a4dce6fffdbbb4bfdae064230b https://www.encodeproject.org/files/ENCFF867UFX/@@download/ENCFF867UFX.bigBed GRCh38 released low read depth, antibody characterized with exemption ENCFF437PVP bigBed narrowPeak peaks ENCSR588AKU ChIP-seq EFO:0002067 K562 cell line Homo sapiens RUNX1-human ENCAB000BIM DNA False 2016-03-31 ENCODE 1, 2 ENCFF560AQD 13205323 ENCODE Processing Pipeline 811ace92fb24a273b1b6e58b11b0c908 https://www.encodeproject.org/files/ENCFF437PVP/@@download/ENCFF437PVP.bigBed GRCh38 released low read depth, antibody characterized with exemption ENCFF388VTY bigBed narrowPeak peaks ENCSR588AKU ChIP-seq EFO:0002067 K562 cell line Homo sapiens RUNX1-human ENCAB000BIM DNA False 2016-03-31 ENCODE 1 ENCFF246VDU 11007204 ENCODE Processing Pipeline 1b606e4e0f2283d4fba5af9b5a0631b1 https://www.encodeproject.org/files/ENCFF388VTY/@@download/ENCFF388VTY.bigBed GRCh38 released low read depth, antibody characterized with exemption ENCFF049YPY bed narrowPeak conservative idr thresholded peaks ENCSR588AKU ChIP-seq EFO:0002067 K562 cell line Homo sapiens RUNX1-human ENCAB000BIM DNA False 2016-03-31 ENCODE 1, 2 ENCFF157SQN, ENCFF246VDU, ENCFF419RSJ, ENCFF560AQD 56619 ENCODE Processing Pipeline 29a3ffe5a110a514e48acc2db47dcc5e https://www.encodeproject.org/files/ENCFF049YPY/@@download/ENCFF049YPY.bed.gz GRCh38 released low read depth, antibody characterized with exemption ENCFF091MQJ bed narrowPeak optimal idr thresholded peaks ENCSR588AKU ChIP-seq EFO:0002067 K562 cell line Homo sapiens RUNX1-human ENCAB000BIM DNA False 2016-03-31 ENCODE 1, 2 ENCFF157SQN, ENCFF246VDU, ENCFF419RSJ, ENCFF560AQD 66220 ENCODE Processing Pipeline 5c2f1d696ec866604a2f43624f6b8839 https://www.encodeproject.org/files/ENCFF091MQJ/@@download/ENCFF091MQJ.bed.gz GRCh38 released low read depth, antibody characterized with exemption ENCFF222JOO bigBed narrowPeak optimal idr thresholded peaks ENCSR588AKU ChIP-seq EFO:0002067 K562 cell line Homo sapiens RUNX1-human ENCAB000BIM DNA False 2016-03-31 ENCODE 1, 2 ENCFF091MQJ 157175 ENCODE Processing Pipeline 69b6b2490672e867a285ffe7227f186b https://www.encodeproject.org/files/ENCFF222JOO/@@download/ENCFF222JOO.bigBed GRCh38 released low read depth, antibody characterized with exemption ENCFF758VSS fastq reads ENCSR120MPG ChIP-seq EFO:0002067 K562 cell line Homo sapiens PRDM10-human ENCAB587QKH DNA False 2018-01-26 ENCODE 2 1 100 paired-ended 1 ENCFF234PZS 3186389334 Michael Snyder, Stanford 81ef69105237c7a842d8a9b944767221 https://www.encodeproject.org/files/ENCFF758VSS/@@download/ENCFF758VSS.fastq.gz Illumina HiSeq 2000 /files/ENCFF240DTE/ released experiment not submitted to GEO partially characterized antibody ENCFF234PZS fastq reads ENCSR120MPG ChIP-seq EFO:0002067 K562 cell line Homo sapiens PRDM10-human ENCAB587QKH DNA False 2018-01-26 ENCODE 2 1 100 paired-ended 2 ENCFF758VSS 3225551348 Michael Snyder, Stanford d222206853e29cfb066a635b4448994f https://www.encodeproject.org/files/ENCFF234PZS/@@download/ENCFF234PZS.fastq.gz Illumina HiSeq 2000 /files/ENCFF608MDV/ released experiment not submitted to GEO partially characterized antibody ENCFF275AJE fastq reads ENCSR120MPG ChIP-seq EFO:0002067 K562 cell line Homo sapiens PRDM10-human ENCAB587QKH DNA False 2018-01-26 ENCODE 1 1 100 paired-ended 1 ENCFF939BBH 3392574779 Michael Snyder, Stanford 9121e925c88025b009d3a14fa5920f71 https://www.encodeproject.org/files/ENCFF275AJE/@@download/ENCFF275AJE.fastq.gz Illumina HiSeq 2000 /files/ENCFF410PHD/ released experiment not submitted to GEO partially characterized antibody ENCFF939BBH fastq reads ENCSR120MPG ChIP-seq EFO:0002067 K562 cell line Homo sapiens PRDM10-human ENCAB587QKH DNA False 2018-01-26 ENCODE 1 1 100 paired-ended 2 ENCFF275AJE 3436233411 Michael Snyder, Stanford aa4c04f9dba6fa6c69bd9c1b27dad7dd https://www.encodeproject.org/files/ENCFF939BBH/@@download/ENCFF939BBH.fastq.gz Illumina HiSeq 2000 /files/ENCFF368UOC/ released experiment not submitted to GEO partially characterized antibody ENCFF050VKA bam unfiltered alignments ENCSR120MPG ChIP-seq EFO:0002067 K562 cell line Homo sapiens PRDM10-human ENCAB587QKH DNA False 2018-01-26 ENCODE 2 100 ENCFF234PZS, ENCFF758VSS, ENCFF807MUK 6779349218 ENCODE Processing Pipeline 82e6f25359ed9edd64438a4d19134dc7 https://www.encodeproject.org/files/ENCFF050VKA/@@download/ENCFF050VKA.bam hg19 released experiment not submitted to GEO partially characterized antibody ENCFF384LZB bam unfiltered alignments ENCSR120MPG ChIP-seq EFO:0002067 K562 cell line Homo sapiens PRDM10-human ENCAB587QKH DNA False 2018-01-26 ENCODE 2 100 ENCFF234PZS, ENCFF643CGH, ENCFF758VSS 6783833273 ENCODE Processing Pipeline 0de0629744109ff34abdff9798323be1 https://www.encodeproject.org/files/ENCFF384LZB/@@download/ENCFF384LZB.bam GRCh38 released experiment not submitted to GEO partially characterized antibody ENCFF327BFX bam unfiltered alignments ENCSR120MPG ChIP-seq EFO:0002067 K562 cell line Homo sapiens PRDM10-human ENCAB587QKH DNA False 2018-01-26 ENCODE 1 100 ENCFF275AJE, ENCFF807MUK, ENCFF939BBH 7155764842 ENCODE Processing Pipeline e90eef24b35d4d16eef96332b330a91f https://www.encodeproject.org/files/ENCFF327BFX/@@download/ENCFF327BFX.bam hg19 released experiment not submitted to GEO partially characterized antibody ENCFF452WBT bam unfiltered alignments ENCSR120MPG ChIP-seq EFO:0002067 K562 cell line Homo sapiens PRDM10-human ENCAB587QKH DNA False 2018-01-26 ENCODE 1 100 ENCFF275AJE, ENCFF643CGH, ENCFF939BBH 7160130952 ENCODE Processing Pipeline 4ecbb7afb20fdb4e12343de0e325b03b https://www.encodeproject.org/files/ENCFF452WBT/@@download/ENCFF452WBT.bam GRCh38 released experiment not submitted to GEO partially characterized antibody ENCFF509AXN bam alignments ENCSR120MPG ChIP-seq EFO:0002067 K562 cell line Homo sapiens PRDM10-human ENCAB587QKH DNA False 2018-01-26 ENCODE 2 100 ENCFF234PZS, ENCFF643CGH, ENCFF758VSS 4826283217 ENCODE Processing Pipeline 0f68f7a068ea965667cfdc56ad32ea3a https://www.encodeproject.org/files/ENCFF509AXN/@@download/ENCFF509AXN.bam GRCh38 released experiment not submitted to GEO partially characterized antibody ENCFF331VSA bam alignments ENCSR120MPG ChIP-seq EFO:0002067 K562 cell line Homo sapiens PRDM10-human ENCAB587QKH DNA False 2018-01-26 ENCODE 2 100 ENCFF234PZS, ENCFF758VSS, ENCFF807MUK 4823353553 ENCODE Processing Pipeline c3e8c2163f517f0ad54f0ffa3b268242 https://www.encodeproject.org/files/ENCFF331VSA/@@download/ENCFF331VSA.bam hg19 released experiment not submitted to GEO partially characterized antibody ENCFF817XAJ bam alignments ENCSR120MPG ChIP-seq EFO:0002067 K562 cell line Homo sapiens PRDM10-human ENCAB587QKH DNA False 2018-01-26 ENCODE 1 100 ENCFF275AJE, ENCFF807MUK, ENCFF939BBH 5203169099 ENCODE Processing Pipeline 12277ca989dc808dccc82d216424409c https://www.encodeproject.org/files/ENCFF817XAJ/@@download/ENCFF817XAJ.bam hg19 released experiment not submitted to GEO partially characterized antibody ENCFF983MYK bam alignments ENCSR120MPG ChIP-seq EFO:0002067 K562 cell line Homo sapiens PRDM10-human ENCAB587QKH DNA False 2018-01-26 ENCODE 1 100 ENCFF275AJE, ENCFF643CGH, ENCFF939BBH 5206593686 ENCODE Processing Pipeline 922615bedd95de22bd4482a1fdf66b40 https://www.encodeproject.org/files/ENCFF983MYK/@@download/ENCFF983MYK.bam GRCh38 released experiment not submitted to GEO partially characterized antibody ENCFF366VCO bigWig signal p-value ENCSR120MPG ChIP-seq EFO:0002067 K562 cell line Homo sapiens PRDM10-human ENCAB587QKH DNA False 2018-01-26 ENCODE 1 ENCFF262CJE, ENCFF506DFV, ENCFF817XAJ 1336892857 ENCODE Processing Pipeline 287b5b036966eb0c588a9f0161badebd https://www.encodeproject.org/files/ENCFF366VCO/@@download/ENCFF366VCO.bigWig hg19 released experiment not submitted to GEO partially characterized antibody ENCFF738ALR bigWig fold change over control ENCSR120MPG ChIP-seq EFO:0002067 K562 cell line Homo sapiens PRDM10-human ENCAB587QKH DNA False 2018-01-26 ENCODE 2 ENCFF262CJE, ENCFF331VSA, ENCFF506DFV 1290924829 ENCODE Processing Pipeline 1883e115abf30a359c14bd36daf424ce https://www.encodeproject.org/files/ENCFF738ALR/@@download/ENCFF738ALR.bigWig hg19 released experiment not submitted to GEO partially characterized antibody ENCFF886HBR bigBed narrowPeak peaks ENCSR120MPG ChIP-seq EFO:0002067 K562 cell line Homo sapiens PRDM10-human ENCAB587QKH DNA False 2018-01-26 ENCODE 2 ENCFF752PUJ 13445077 ENCODE Processing Pipeline e021489b86d90a9136f9d7ce720f3f75 https://www.encodeproject.org/files/ENCFF886HBR/@@download/ENCFF886HBR.bigBed hg19 released experiment not submitted to GEO partially characterized antibody ENCFF447ZIL bigWig fold change over control ENCSR120MPG ChIP-seq EFO:0002067 K562 cell line Homo sapiens PRDM10-human ENCAB587QKH DNA False 2018-01-26 ENCODE 1 ENCFF262CJE, ENCFF506DFV, ENCFF817XAJ 1320346906 ENCODE Processing Pipeline d659f40e122195b78d5227c0d6477f02 https://www.encodeproject.org/files/ENCFF447ZIL/@@download/ENCFF447ZIL.bigWig hg19 released experiment not submitted to GEO partially characterized antibody ENCFF732WVL bigWig signal p-value ENCSR120MPG ChIP-seq EFO:0002067 K562 cell line Homo sapiens PRDM10-human ENCAB587QKH DNA False 2018-01-26 ENCODE 1, 2 ENCFF262CJE, ENCFF331VSA, ENCFF506DFV, ENCFF817XAJ 1746454156 ENCODE Processing Pipeline 3004c702655a59923532d4c732eabbf5 https://www.encodeproject.org/files/ENCFF732WVL/@@download/ENCFF732WVL.bigWig hg19 released experiment not submitted to GEO partially characterized antibody ENCFF530KHY bigWig signal p-value ENCSR120MPG ChIP-seq EFO:0002067 K562 cell line Homo sapiens PRDM10-human ENCAB587QKH DNA False 2018-01-26 ENCODE 2 ENCFF262CJE, ENCFF331VSA, ENCFF506DFV 1193606758 ENCODE Processing Pipeline 9a01b81c13433de43b4fbc71ec7f677a https://www.encodeproject.org/files/ENCFF530KHY/@@download/ENCFF530KHY.bigWig hg19 released experiment not submitted to GEO partially characterized antibody ENCFF394QGN bed narrowPeak peaks ENCSR120MPG ChIP-seq EFO:0002067 K562 cell line Homo sapiens PRDM10-human ENCAB587QKH DNA False 2018-01-26 ENCODE 1, 2 ENCFF262CJE, ENCFF331VSA, ENCFF506DFV, ENCFF817XAJ 7124209 ENCODE Processing Pipeline e54dd68212518fc5642a3447c1c01d47 https://www.encodeproject.org/files/ENCFF394QGN/@@download/ENCFF394QGN.bed.gz hg19 released experiment not submitted to GEO partially characterized antibody ENCFF294HEI bed narrowPeak optimal idr thresholded peaks ENCSR120MPG ChIP-seq EFO:0002067 K562 cell line Homo sapiens PRDM10-human ENCAB587QKH DNA False 2018-01-26 ENCODE 1, 2 ENCFF001TDO, ENCFF394QGN, ENCFF443DXB, ENCFF752PUJ 521743 ENCODE Processing Pipeline 0cf5614471526e753fbc503179bba328 https://www.encodeproject.org/files/ENCFF294HEI/@@download/ENCFF294HEI.bed.gz hg19 released experiment not submitted to GEO partially characterized antibody ENCFF251XOX bigWig fold change over control ENCSR120MPG ChIP-seq EFO:0002067 K562 cell line Homo sapiens PRDM10-human ENCAB587QKH DNA False 2018-01-26 ENCODE 1, 2 ENCFF262CJE, ENCFF331VSA, ENCFF506DFV, ENCFF817XAJ 1845740358 ENCODE Processing Pipeline 8b15edc7cb8348be02f747b36b93e4ea https://www.encodeproject.org/files/ENCFF251XOX/@@download/ENCFF251XOX.bigWig hg19 released experiment not submitted to GEO partially characterized antibody ENCFF443DXB bed narrowPeak peaks ENCSR120MPG ChIP-seq EFO:0002067 K562 cell line Homo sapiens PRDM10-human ENCAB587QKH DNA False 2018-01-26 ENCODE 1 ENCFF262CJE, ENCFF506DFV, ENCFF817XAJ 6804835 ENCODE Processing Pipeline 6b8959a7b8a8c771004bde83f0b6a755 https://www.encodeproject.org/files/ENCFF443DXB/@@download/ENCFF443DXB.bed.gz hg19 released experiment not submitted to GEO partially characterized antibody ENCFF752PUJ bed narrowPeak peaks ENCSR120MPG ChIP-seq EFO:0002067 K562 cell line Homo sapiens PRDM10-human ENCAB587QKH DNA False 2018-01-26 ENCODE 2 ENCFF262CJE, ENCFF331VSA, ENCFF506DFV 6735798 ENCODE Processing Pipeline a17e78b385eb53e4fe51aa779174fd22 https://www.encodeproject.org/files/ENCFF752PUJ/@@download/ENCFF752PUJ.bed.gz hg19 released experiment not submitted to GEO partially characterized antibody ENCFF086SYM bigBed narrowPeak peaks ENCSR120MPG ChIP-seq EFO:0002067 K562 cell line Homo sapiens PRDM10-human ENCAB587QKH DNA False 2018-01-26 ENCODE 1 ENCFF443DXB 13437141 ENCODE Processing Pipeline 87f1b807067d97c520caf7e191739473 https://www.encodeproject.org/files/ENCFF086SYM/@@download/ENCFF086SYM.bigBed hg19 released experiment not submitted to GEO partially characterized antibody ENCFF427GXG bigBed narrowPeak peaks ENCSR120MPG ChIP-seq EFO:0002067 K562 cell line Homo sapiens PRDM10-human ENCAB587QKH DNA False 2018-01-26 ENCODE 1, 2 ENCFF394QGN 13310367 ENCODE Processing Pipeline a1838b305bb64c498fabeaaf011411d2 https://www.encodeproject.org/files/ENCFF427GXG/@@download/ENCFF427GXG.bigBed hg19 released experiment not submitted to GEO partially characterized antibody ENCFF548RXT bed narrowPeak conservative idr thresholded peaks ENCSR120MPG ChIP-seq EFO:0002067 K562 cell line Homo sapiens PRDM10-human ENCAB587QKH DNA False 2018-01-26 ENCODE 1, 2 ENCFF001TDO, ENCFF394QGN, ENCFF443DXB, ENCFF752PUJ 470098 ENCODE Processing Pipeline 6660c8871a85839023bafa292125575b https://www.encodeproject.org/files/ENCFF548RXT/@@download/ENCFF548RXT.bed.gz hg19 released experiment not submitted to GEO partially characterized antibody ENCFF560NYE bigBed narrowPeak conservative idr thresholded peaks ENCSR120MPG ChIP-seq EFO:0002067 K562 cell line Homo sapiens PRDM10-human ENCAB587QKH DNA False 2018-01-26 ENCODE 1, 2 ENCFF548RXT 997133 ENCODE Processing Pipeline 563135b301fb78ad678f15e2d5420c3f https://www.encodeproject.org/files/ENCFF560NYE/@@download/ENCFF560NYE.bigBed hg19 released experiment not submitted to GEO partially characterized antibody ENCFF081GCL bigBed narrowPeak optimal idr thresholded peaks ENCSR120MPG ChIP-seq EFO:0002067 K562 cell line Homo sapiens PRDM10-human ENCAB587QKH DNA False 2018-01-26 ENCODE 1, 2 ENCFF294HEI 1076623 ENCODE Processing Pipeline 981edeb0af15efdf8b4271a9e086a9b3 https://www.encodeproject.org/files/ENCFF081GCL/@@download/ENCFF081GCL.bigBed hg19 released experiment not submitted to GEO partially characterized antibody ENCFF267TUK bigWig fold change over control ENCSR120MPG ChIP-seq EFO:0002067 K562 cell line Homo sapiens PRDM10-human ENCAB587QKH DNA False 2018-01-26 ENCODE 1 ENCFF720AUK, ENCFF796JTX, ENCFF983MYK 1341355880 ENCODE Processing Pipeline 4d3ed0b44b7248d7d5e3d7e3a62c048f https://www.encodeproject.org/files/ENCFF267TUK/@@download/ENCFF267TUK.bigWig GRCh38 released experiment not submitted to GEO partially characterized antibody ENCFF361AFP bigWig signal p-value ENCSR120MPG ChIP-seq EFO:0002067 K562 cell line Homo sapiens PRDM10-human ENCAB587QKH DNA False 2018-01-26 ENCODE 2 ENCFF509AXN, ENCFF720AUK, ENCFF796JTX 1246293306 ENCODE Processing Pipeline 8198fb693cf2cf01e35ac79d27058046 https://www.encodeproject.org/files/ENCFF361AFP/@@download/ENCFF361AFP.bigWig GRCh38 released experiment not submitted to GEO partially characterized antibody ENCFF067HVB bigWig signal p-value ENCSR120MPG ChIP-seq EFO:0002067 K562 cell line Homo sapiens PRDM10-human ENCAB587QKH DNA False 2018-01-26 ENCODE 1, 2 ENCFF509AXN, ENCFF720AUK, ENCFF796JTX, ENCFF983MYK 1751708642 ENCODE Processing Pipeline ccab63625bc515cdb7167597ae6a33b8 https://www.encodeproject.org/files/ENCFF067HVB/@@download/ENCFF067HVB.bigWig GRCh38 released experiment not submitted to GEO partially characterized antibody ENCFF874QGV bed narrowPeak peaks ENCSR120MPG ChIP-seq EFO:0002067 K562 cell line Homo sapiens PRDM10-human ENCAB587QKH DNA False 2018-01-26 ENCODE 1 ENCFF720AUK, ENCFF796JTX, ENCFF983MYK 6811910 ENCODE Processing Pipeline 838b0c3f4dc939929fe013184451533e https://www.encodeproject.org/files/ENCFF874QGV/@@download/ENCFF874QGV.bed.gz GRCh38 released experiment not submitted to GEO partially characterized antibody ENCFF393KKO bed narrowPeak peaks ENCSR120MPG ChIP-seq EFO:0002067 K562 cell line Homo sapiens PRDM10-human ENCAB587QKH DNA False 2018-01-26 ENCODE 1, 2 ENCFF509AXN, ENCFF720AUK, ENCFF796JTX, ENCFF983MYK 7137438 ENCODE Processing Pipeline 0ab062cf4aa1bd5c0e21c42ac9a29b24 https://www.encodeproject.org/files/ENCFF393KKO/@@download/ENCFF393KKO.bed.gz GRCh38 released experiment not submitted to GEO partially characterized antibody ENCFF121LWG bigWig signal p-value ENCSR120MPG ChIP-seq EFO:0002067 K562 cell line Homo sapiens PRDM10-human ENCAB587QKH DNA False 2018-01-26 ENCODE 1 ENCFF720AUK, ENCFF796JTX, ENCFF983MYK 1186060127 ENCODE Processing Pipeline 62f0b9a0090b911728eb057b5280934f https://www.encodeproject.org/files/ENCFF121LWG/@@download/ENCFF121LWG.bigWig GRCh38 released experiment not submitted to GEO partially characterized antibody ENCFF361MCU bigBed narrowPeak peaks ENCSR120MPG ChIP-seq EFO:0002067 K562 cell line Homo sapiens PRDM10-human ENCAB587QKH DNA False 2018-01-26 ENCODE 1 ENCFF874QGV 13454667 ENCODE Processing Pipeline 4d6fce492f54b3726577ccbee49e74fc https://www.encodeproject.org/files/ENCFF361MCU/@@download/ENCFF361MCU.bigBed GRCh38 released experiment not submitted to GEO partially characterized antibody ENCFF712DMJ bigBed narrowPeak peaks ENCSR120MPG ChIP-seq EFO:0002067 K562 cell line Homo sapiens PRDM10-human ENCAB587QKH DNA False 2018-01-26 ENCODE 1, 2 ENCFF393KKO 13322996 ENCODE Processing Pipeline 3d5774f7233abd97956ef10d0a6fcb1f https://www.encodeproject.org/files/ENCFF712DMJ/@@download/ENCFF712DMJ.bigBed GRCh38 released experiment not submitted to GEO partially characterized antibody ENCFF600HPZ bed narrowPeak optimal idr thresholded peaks ENCSR120MPG ChIP-seq EFO:0002067 K562 cell line Homo sapiens PRDM10-human ENCAB587QKH DNA False 2018-01-26 ENCODE 1, 2 ENCFF393KKO, ENCFF419RSJ, ENCFF767BVK, ENCFF874QGV 527281 ENCODE Processing Pipeline ae29bd3ec6c79ce293dfcad35f2fd401 https://www.encodeproject.org/files/ENCFF600HPZ/@@download/ENCFF600HPZ.bed.gz GRCh38 released experiment not submitted to GEO partially characterized antibody ENCFF402NVL bigWig fold change over control ENCSR120MPG ChIP-seq EFO:0002067 K562 cell line Homo sapiens PRDM10-human ENCAB587QKH DNA False 2018-01-26 ENCODE 2 ENCFF509AXN, ENCFF720AUK, ENCFF796JTX 1289066806 ENCODE Processing Pipeline 5079f1fd6eecfddc73f3f734a4e05c9e https://www.encodeproject.org/files/ENCFF402NVL/@@download/ENCFF402NVL.bigWig GRCh38 released experiment not submitted to GEO partially characterized antibody ENCFF123SJW bigBed narrowPeak optimal idr thresholded peaks ENCSR120MPG ChIP-seq EFO:0002067 K562 cell line Homo sapiens PRDM10-human ENCAB587QKH DNA False 2018-01-26 ENCODE 1, 2 ENCFF600HPZ 1085658 ENCODE Processing Pipeline c9da276f2eb71da7484668967b411e14 https://www.encodeproject.org/files/ENCFF123SJW/@@download/ENCFF123SJW.bigBed GRCh38 released experiment not submitted to GEO partially characterized antibody ENCFF187MZK bigWig fold change over control ENCSR120MPG ChIP-seq EFO:0002067 K562 cell line Homo sapiens PRDM10-human ENCAB587QKH DNA False 2018-01-26 ENCODE 1, 2 ENCFF509AXN, ENCFF720AUK, ENCFF796JTX, ENCFF983MYK 1852465350 ENCODE Processing Pipeline 5fa939fdde83b4c0bcd46fae3cf91bee https://www.encodeproject.org/files/ENCFF187MZK/@@download/ENCFF187MZK.bigWig GRCh38 released experiment not submitted to GEO partially characterized antibody ENCFF684GRR bigBed narrowPeak peaks ENCSR120MPG ChIP-seq EFO:0002067 K562 cell line Homo sapiens PRDM10-human ENCAB587QKH DNA False 2018-01-26 ENCODE 2 ENCFF767BVK 13460870 ENCODE Processing Pipeline d244bd2d5b94ab1f9cfe908548555441 https://www.encodeproject.org/files/ENCFF684GRR/@@download/ENCFF684GRR.bigBed GRCh38 released experiment not submitted to GEO partially characterized antibody ENCFF041AYU bed narrowPeak conservative idr thresholded peaks ENCSR120MPG ChIP-seq EFO:0002067 K562 cell line Homo sapiens PRDM10-human ENCAB587QKH DNA False 2018-01-26 ENCODE 1, 2 ENCFF393KKO, ENCFF419RSJ, ENCFF767BVK, ENCFF874QGV 472341 ENCODE Processing Pipeline 00d72926f3b91ab91c6892eceb338ea2 https://www.encodeproject.org/files/ENCFF041AYU/@@download/ENCFF041AYU.bed.gz GRCh38 released experiment not submitted to GEO partially characterized antibody ENCFF767BVK bed narrowPeak peaks ENCSR120MPG ChIP-seq EFO:0002067 K562 cell line Homo sapiens PRDM10-human ENCAB587QKH DNA False 2018-01-26 ENCODE 2 ENCFF509AXN, ENCFF720AUK, ENCFF796JTX 6743941 ENCODE Processing Pipeline efd5067cae848dd339059b05165629a7 https://www.encodeproject.org/files/ENCFF767BVK/@@download/ENCFF767BVK.bed.gz GRCh38 released experiment not submitted to GEO partially characterized antibody ENCFF968TZC bigBed narrowPeak conservative idr thresholded peaks ENCSR120MPG ChIP-seq EFO:0002067 K562 cell line Homo sapiens PRDM10-human ENCAB587QKH DNA False 2018-01-26 ENCODE 1, 2 ENCFF041AYU 1001055 ENCODE Processing Pipeline 6b6ac7134c36c55708f6da81e6848010 https://www.encodeproject.org/files/ENCFF968TZC/@@download/ENCFF968TZC.bigBed GRCh38 released experiment not submitted to GEO partially characterized antibody ENCFF123UBX bam unfiltered alignments ENCSR619GFP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-HINFP-human ENCAB728YTO DNA False 2016-03-02 ENCODE 2 100 ENCFF224KMR, ENCFF423ZOG, ENCFF807MUK 3939268785 ENCODE Processing Pipeline 754be64aa45f0145de2cf58b42d958ca https://www.encodeproject.org/files/ENCFF123UBX/@@download/ENCFF123UBX.bam hg19 released control low read depth, missing genetic modification characterization, low read depth, mild to moderate bottlenecking ENCFF062SVK bam unfiltered alignments ENCSR619GFP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-HINFP-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1 100 ENCFF541TDH, ENCFF551WWR, ENCFF807MUK 4145125929 ENCODE Processing Pipeline c488d5a4d74f0829770c8ba9dcbc7f82 https://www.encodeproject.org/files/ENCFF062SVK/@@download/ENCFF062SVK.bam hg19 released control low read depth, missing genetic modification characterization, low read depth, mild to moderate bottlenecking ENCFF423ZOG fastq reads ENCSR619GFP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-HINFP-human ENCAB728YTO DNA False 2016-03-02 ENCODE 2 1 100 paired-ended 1 ENCFF224KMR 1774977922 Michael Snyder, Stanford aa74c9132ac17f94699cd7fb9ff3244e SRA:SRR5111858 https://www.encodeproject.org/files/ENCFF423ZOG/@@download/ENCFF423ZOG.fastq.gz Illumina HiSeq 2000 /files/ENCFF217VQE/ released control low read depth, missing genetic modification characterization, low read depth, mild to moderate bottlenecking ENCFF224KMR fastq reads ENCSR619GFP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-HINFP-human ENCAB728YTO DNA False 2016-03-02 ENCODE 2 1 100 paired-ended 2 ENCFF423ZOG 1796312022 Michael Snyder, Stanford cf1617e8cdc55e7dfe77a9b9196552b6 SRA:SRR5111858 https://www.encodeproject.org/files/ENCFF224KMR/@@download/ENCFF224KMR.fastq.gz Illumina HiSeq 2000 /files/ENCFF241ECN/ released control low read depth, missing genetic modification characterization, low read depth, mild to moderate bottlenecking ENCFF541TDH fastq reads ENCSR619GFP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-HINFP-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1 1 100 paired-ended 2 ENCFF551WWR 1942946609 Michael Snyder, Stanford a0398cde505c2e8c077ac8b441ba797e SRA:SRR5111857 https://www.encodeproject.org/files/ENCFF541TDH/@@download/ENCFF541TDH.fastq.gz Illumina HiSeq 2000 /files/ENCFF241ECN/ released control low read depth, missing genetic modification characterization, low read depth, mild to moderate bottlenecking ENCFF551WWR fastq reads ENCSR619GFP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-HINFP-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1 1 100 paired-ended 1 ENCFF541TDH 1902515789 Michael Snyder, Stanford 6ca2cac6e45396dadc96dbacc2a57078 SRA:SRR5111857 https://www.encodeproject.org/files/ENCFF551WWR/@@download/ENCFF551WWR.fastq.gz Illumina HiSeq 2000 /files/ENCFF217VQE/ released control low read depth, missing genetic modification characterization, low read depth, mild to moderate bottlenecking ENCFF290VXO bam alignments ENCSR619GFP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-HINFP-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1 100 ENCFF541TDH, ENCFF551WWR, ENCFF807MUK 3339905451 ENCODE Processing Pipeline f6dec8755f091f40f7c3b7e047fb3b01 https://www.encodeproject.org/files/ENCFF290VXO/@@download/ENCFF290VXO.bam hg19 released control low read depth, missing genetic modification characterization, low read depth, mild to moderate bottlenecking ENCFF311MHB bam alignments ENCSR619GFP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-HINFP-human ENCAB728YTO DNA False 2016-03-02 ENCODE 2 100 ENCFF224KMR, ENCFF423ZOG, ENCFF807MUK 3412051633 ENCODE Processing Pipeline 81f9543b40553cbcc7758c4ac04ba22d https://www.encodeproject.org/files/ENCFF311MHB/@@download/ENCFF311MHB.bam hg19 released control low read depth, missing genetic modification characterization, low read depth, mild to moderate bottlenecking ENCFF699VMO bigWig signal p-value ENCSR619GFP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-HINFP-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1 ENCFF180DLN, ENCFF290VXO 642125335 ENCODE Processing Pipeline 2889ad04a1e5f994ae97287bb7b79ea8 https://www.encodeproject.org/files/ENCFF699VMO/@@download/ENCFF699VMO.bigWig hg19 released control low read depth, missing genetic modification characterization, low read depth, mild to moderate bottlenecking ENCFF322CTE bigWig signal p-value ENCSR619GFP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-HINFP-human ENCAB728YTO DNA False 2016-03-02 ENCODE 2 ENCFF180DLN, ENCFF311MHB 643025967 ENCODE Processing Pipeline 33e1196bc706996301679123eeee2dba https://www.encodeproject.org/files/ENCFF322CTE/@@download/ENCFF322CTE.bigWig hg19 released control low read depth, missing genetic modification characterization, low read depth, mild to moderate bottlenecking ENCFF802EXO bigWig signal p-value ENCSR619GFP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-HINFP-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF180DLN, ENCFF290VXO, ENCFF311MHB 632882227 ENCODE Processing Pipeline 988e90b1ff229e1e0fbed1271de0f66e https://www.encodeproject.org/files/ENCFF802EXO/@@download/ENCFF802EXO.bigWig hg19 released control low read depth, missing genetic modification characterization, low read depth, mild to moderate bottlenecking ENCFF871DYS bigWig fold change over control ENCSR619GFP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-HINFP-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1 ENCFF180DLN, ENCFF290VXO 701285417 ENCODE Processing Pipeline 747319f4798651b9ec548c467b95d9f3 https://www.encodeproject.org/files/ENCFF871DYS/@@download/ENCFF871DYS.bigWig hg19 released control low read depth, missing genetic modification characterization, low read depth, mild to moderate bottlenecking ENCFF639JPW bigWig fold change over control ENCSR619GFP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-HINFP-human ENCAB728YTO DNA False 2016-03-02 ENCODE 2 ENCFF180DLN, ENCFF311MHB 723486396 ENCODE Processing Pipeline dc18996f6c75545894128145ec6824aa https://www.encodeproject.org/files/ENCFF639JPW/@@download/ENCFF639JPW.bigWig hg19 released control low read depth, missing genetic modification characterization, low read depth, mild to moderate bottlenecking ENCFF129FNZ bigWig fold change over control ENCSR619GFP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-HINFP-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF180DLN, ENCFF290VXO, ENCFF311MHB 1195099195 ENCODE Processing Pipeline db0f010af5bd4b293e5b685240a0e19c https://www.encodeproject.org/files/ENCFF129FNZ/@@download/ENCFF129FNZ.bigWig hg19 released control low read depth, missing genetic modification characterization, low read depth, mild to moderate bottlenecking ENCFF369YHE bed narrowPeak peaks ENCSR619GFP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-HINFP-human ENCAB728YTO DNA False 2016-03-02 ENCODE 2 ENCFF180DLN, ENCFF311MHB 5606389 ENCODE Processing Pipeline d8cddbe81473e58340ce677c25e38cc5 https://www.encodeproject.org/files/ENCFF369YHE/@@download/ENCFF369YHE.bed.gz hg19 released control low read depth, missing genetic modification characterization, low read depth, mild to moderate bottlenecking ENCFF510KRZ bigBed narrowPeak peaks ENCSR619GFP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-HINFP-human ENCAB728YTO DNA False 2016-03-02 ENCODE 2 ENCFF369YHE 11168622 ENCODE Processing Pipeline 6f3ae6e2998cbb7524bb6e7116d4d62d https://www.encodeproject.org/files/ENCFF510KRZ/@@download/ENCFF510KRZ.bigBed hg19 released control low read depth, missing genetic modification characterization, low read depth, mild to moderate bottlenecking ENCFF089QJI bed narrowPeak peaks ENCSR619GFP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-HINFP-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1 ENCFF180DLN, ENCFF290VXO 5435601 ENCODE Processing Pipeline 1b3771a11fba80bd23684e282119d03b https://www.encodeproject.org/files/ENCFF089QJI/@@download/ENCFF089QJI.bed.gz hg19 released control low read depth, missing genetic modification characterization, low read depth, mild to moderate bottlenecking ENCFF922IFQ bed narrowPeak peaks ENCSR619GFP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-HINFP-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF180DLN, ENCFF290VXO, ENCFF311MHB 6399513 ENCODE Processing Pipeline 05e91842f81f7d1926814e2fdd3f27de https://www.encodeproject.org/files/ENCFF922IFQ/@@download/ENCFF922IFQ.bed.gz hg19 released control low read depth, missing genetic modification characterization, low read depth, mild to moderate bottlenecking ENCFF002HTW bigBed narrowPeak peaks ENCSR619GFP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-HINFP-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1 ENCFF089QJI 11115199 ENCODE Processing Pipeline b0ac63f6dc88b2284a57a261aea0d659 https://www.encodeproject.org/files/ENCFF002HTW/@@download/ENCFF002HTW.bigBed hg19 released control low read depth, missing genetic modification characterization, low read depth, mild to moderate bottlenecking ENCFF343VHU bigBed narrowPeak peaks ENCSR619GFP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-HINFP-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF922IFQ 13088799 ENCODE Processing Pipeline 221d2bbed053dad7ec121ab6b3ba21f9 https://www.encodeproject.org/files/ENCFF343VHU/@@download/ENCFF343VHU.bigBed hg19 released control low read depth, missing genetic modification characterization, low read depth, mild to moderate bottlenecking ENCFF065IPK bam unfiltered alignments ENCSR619GFP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-HINFP-human ENCAB728YTO DNA False 2016-03-02 ENCODE 2 100 ENCFF224KMR, ENCFF423ZOG, ENCFF643CGH 3944654315 ENCODE Processing Pipeline e5add73b2eff460ce969f25ef482f250 https://www.encodeproject.org/files/ENCFF065IPK/@@download/ENCFF065IPK.bam GRCh38 released control low read depth, missing genetic modification characterization, low read depth, mild to moderate bottlenecking ENCFF541OKB bam unfiltered alignments ENCSR619GFP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-HINFP-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1 100 ENCFF541TDH, ENCFF551WWR, ENCFF643CGH 4149547801 ENCODE Processing Pipeline d9f06ae91e9a990890b21feca90c9001 https://www.encodeproject.org/files/ENCFF541OKB/@@download/ENCFF541OKB.bam GRCh38 released control low read depth, missing genetic modification characterization, low read depth, mild to moderate bottlenecking ENCFF448SJG bam alignments ENCSR619GFP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-HINFP-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1 100 ENCFF541TDH, ENCFF551WWR, ENCFF643CGH 3341270470 ENCODE Processing Pipeline 8886dc01b43879fb148cd220715e61c8 https://www.encodeproject.org/files/ENCFF448SJG/@@download/ENCFF448SJG.bam GRCh38 released control low read depth, missing genetic modification characterization, low read depth, mild to moderate bottlenecking ENCFF786KLU bam alignments ENCSR619GFP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-HINFP-human ENCAB728YTO DNA False 2016-03-02 ENCODE 2 100 ENCFF224KMR, ENCFF423ZOG, ENCFF643CGH 3413407961 ENCODE Processing Pipeline a43caf2f3074e728c021861f208ea89f https://www.encodeproject.org/files/ENCFF786KLU/@@download/ENCFF786KLU.bam GRCh38 released control low read depth, missing genetic modification characterization, low read depth, mild to moderate bottlenecking ENCFF360WSW bigWig signal p-value ENCSR619GFP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-HINFP-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1 ENCFF448SJG, ENCFF596JNR 643245354 ENCODE Processing Pipeline 7545fba71df36d90bd07a7a10ad393df https://www.encodeproject.org/files/ENCFF360WSW/@@download/ENCFF360WSW.bigWig GRCh38 released control low read depth, missing genetic modification characterization, low read depth, mild to moderate bottlenecking ENCFF019YIB bigWig signal p-value ENCSR619GFP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-HINFP-human ENCAB728YTO DNA False 2016-03-02 ENCODE 2 ENCFF596JNR, ENCFF786KLU 647689733 ENCODE Processing Pipeline 01427e4566fbc7c94a65393396e3eed2 https://www.encodeproject.org/files/ENCFF019YIB/@@download/ENCFF019YIB.bigWig GRCh38 released control low read depth, missing genetic modification characterization, low read depth, mild to moderate bottlenecking ENCFF975SOT bigWig signal p-value ENCSR619GFP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-HINFP-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF448SJG, ENCFF596JNR, ENCFF786KLU 631040218 ENCODE Processing Pipeline cbd43f5bef7b8594e9423133298f90e6 https://www.encodeproject.org/files/ENCFF975SOT/@@download/ENCFF975SOT.bigWig GRCh38 released control low read depth, missing genetic modification characterization, low read depth, mild to moderate bottlenecking ENCFF868SYM bigWig fold change over control ENCSR619GFP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-HINFP-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1 ENCFF448SJG, ENCFF596JNR 701310087 ENCODE Processing Pipeline e72910d21da286563a13bbeda52cb455 https://www.encodeproject.org/files/ENCFF868SYM/@@download/ENCFF868SYM.bigWig GRCh38 released control low read depth, missing genetic modification characterization, low read depth, mild to moderate bottlenecking ENCFF631CKI bigWig fold change over control ENCSR619GFP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-HINFP-human ENCAB728YTO DNA False 2016-03-02 ENCODE 2 ENCFF596JNR, ENCFF786KLU 738208340 ENCODE Processing Pipeline b69badfeb855d1156f363b56acd79f12 https://www.encodeproject.org/files/ENCFF631CKI/@@download/ENCFF631CKI.bigWig GRCh38 released control low read depth, missing genetic modification characterization, low read depth, mild to moderate bottlenecking ENCFF472NPM bigWig fold change over control ENCSR619GFP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-HINFP-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF448SJG, ENCFF596JNR, ENCFF786KLU 1195949114 ENCODE Processing Pipeline bc628452a8e05b487e19523dc2c1b772 https://www.encodeproject.org/files/ENCFF472NPM/@@download/ENCFF472NPM.bigWig GRCh38 released control low read depth, missing genetic modification characterization, low read depth, mild to moderate bottlenecking ENCFF182JFB bed narrowPeak peaks ENCSR619GFP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-HINFP-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1 ENCFF448SJG, ENCFF596JNR 5252380 ENCODE Processing Pipeline f84be3398bf1e178da40f78b82a94102 https://www.encodeproject.org/files/ENCFF182JFB/@@download/ENCFF182JFB.bed.gz GRCh38 released control low read depth, missing genetic modification characterization, low read depth, mild to moderate bottlenecking ENCFF602MFR bed narrowPeak peaks ENCSR619GFP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-HINFP-human ENCAB728YTO DNA False 2016-03-02 ENCODE 2 ENCFF596JNR, ENCFF786KLU 5422295 ENCODE Processing Pipeline 1d256864c303da65abf4ffda27502b59 https://www.encodeproject.org/files/ENCFF602MFR/@@download/ENCFF602MFR.bed.gz GRCh38 released control low read depth, missing genetic modification characterization, low read depth, mild to moderate bottlenecking ENCFF310BUW bed narrowPeak peaks ENCSR619GFP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-HINFP-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF448SJG, ENCFF596JNR, ENCFF786KLU 6289663 ENCODE Processing Pipeline 2222ab14bd61560b581b7ee4abfabdc4 https://www.encodeproject.org/files/ENCFF310BUW/@@download/ENCFF310BUW.bed.gz GRCh38 released control low read depth, missing genetic modification characterization, low read depth, mild to moderate bottlenecking ENCFF264ARH bigBed narrowPeak peaks ENCSR619GFP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-HINFP-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1 ENCFF182JFB 11075185 ENCODE Processing Pipeline fc55430b567508c9d75ff3179ab3e54d https://www.encodeproject.org/files/ENCFF264ARH/@@download/ENCFF264ARH.bigBed GRCh38 released control low read depth, missing genetic modification characterization, low read depth, mild to moderate bottlenecking ENCFF878IEG bigBed narrowPeak peaks ENCSR619GFP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-HINFP-human ENCAB728YTO DNA False 2016-03-02 ENCODE 2 ENCFF602MFR 11105008 ENCODE Processing Pipeline 9df8aa77331f0351ec1773a499b6a5c0 https://www.encodeproject.org/files/ENCFF878IEG/@@download/ENCFF878IEG.bigBed GRCh38 released control low read depth, missing genetic modification characterization, low read depth, mild to moderate bottlenecking ENCFF330DQY bigBed narrowPeak peaks ENCSR619GFP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-HINFP-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF310BUW 13093473 ENCODE Processing Pipeline ed9ace5c117ac4a38d4c0a298a24b7c0 https://www.encodeproject.org/files/ENCFF330DQY/@@download/ENCFF330DQY.bigBed GRCh38 released control low read depth, missing genetic modification characterization, low read depth, mild to moderate bottlenecking ENCFF624ZLP bigBed narrowPeak conservative idr thresholded peaks ENCSR619GFP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-HINFP-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF088EKR 286021 ENCODE Processing Pipeline 565092d396ef625aaf5a0020d92ab9f4 https://www.encodeproject.org/files/ENCFF624ZLP/@@download/ENCFF624ZLP.bigBed GRCh38 released control low read depth, missing genetic modification characterization, low read depth, mild to moderate bottlenecking ENCFF558VAL bed narrowPeak optimal idr thresholded peaks ENCSR619GFP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-HINFP-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF182JFB, ENCFF310BUW, ENCFF419RSJ, ENCFF602MFR 157997 ENCODE Processing Pipeline e16bf2d6312c6ab45aae1c7e5f8ea231 https://www.encodeproject.org/files/ENCFF558VAL/@@download/ENCFF558VAL.bed.gz GRCh38 released control low read depth, missing genetic modification characterization, low read depth, mild to moderate bottlenecking ENCFF088EKR bed narrowPeak conservative idr thresholded peaks ENCSR619GFP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-HINFP-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF182JFB, ENCFF310BUW, ENCFF419RSJ, ENCFF602MFR 122590 ENCODE Processing Pipeline ab19c6d32b36f58c887894e72e87ca3b https://www.encodeproject.org/files/ENCFF088EKR/@@download/ENCFF088EKR.bed.gz GRCh38 released control low read depth, missing genetic modification characterization, low read depth, mild to moderate bottlenecking ENCFF732CUP bigBed narrowPeak optimal idr thresholded peaks ENCSR619GFP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-HINFP-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF558VAL 336588 ENCODE Processing Pipeline 494c8d418f2bbe39fc08a71464bac671 https://www.encodeproject.org/files/ENCFF732CUP/@@download/ENCFF732CUP.bigBed GRCh38 released control low read depth, missing genetic modification characterization, low read depth, mild to moderate bottlenecking ENCFF873VTX bigBed narrowPeak conservative idr thresholded peaks ENCSR619GFP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-HINFP-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF413OIG 208077 ENCODE Processing Pipeline 02fb35860d65b57aca62ab2d8d69fced https://www.encodeproject.org/files/ENCFF873VTX/@@download/ENCFF873VTX.bigBed hg19 released control low read depth, missing genetic modification characterization, low read depth, mild to moderate bottlenecking ENCFF265LKN bed narrowPeak optimal idr thresholded peaks ENCSR619GFP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-HINFP-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF001TDO, ENCFF089QJI, ENCFF369YHE, ENCFF922IFQ 128527 ENCODE Processing Pipeline 38e7c9a347317a014c942a4fb187d1c6 https://www.encodeproject.org/files/ENCFF265LKN/@@download/ENCFF265LKN.bed.gz hg19 released control low read depth, missing genetic modification characterization, low read depth, mild to moderate bottlenecking ENCFF819SGJ bigBed narrowPeak optimal idr thresholded peaks ENCSR619GFP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-HINFP-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF265LKN 240507 ENCODE Processing Pipeline 1a91de5a4f85a1e7c0ae619de63354fe https://www.encodeproject.org/files/ENCFF819SGJ/@@download/ENCFF819SGJ.bigBed hg19 released control low read depth, missing genetic modification characterization, low read depth, mild to moderate bottlenecking ENCFF413OIG bed narrowPeak conservative idr thresholded peaks ENCSR619GFP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-HINFP-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF001TDO, ENCFF089QJI, ENCFF369YHE, ENCFF922IFQ 101256 ENCODE Processing Pipeline 12e85fe44ebdf827e3c7d618feee2aaf https://www.encodeproject.org/files/ENCFF413OIG/@@download/ENCFF413OIG.bed.gz hg19 released control low read depth, missing genetic modification characterization, low read depth, mild to moderate bottlenecking ENCFF773PJF bam unfiltered alignments ENCSR257XVY ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF83-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 50 ENCFF251YFI, ENCFF807MUK 1055112741 ENCODE Processing Pipeline 16c1e26b5401dc1f6a16dec0edacb072 https://www.encodeproject.org/files/ENCFF773PJF/@@download/ENCFF773PJF.bam hg19 released borderline replicate concordance, low read depth, missing genetic modification characterization ENCFF310JOS bam unfiltered alignments ENCSR257XVY ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF83-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 50 ENCFF471BMT, ENCFF718QVM, ENCFF807MUK 1965412569 ENCODE Processing Pipeline 2f6e5a4fd9cdd84b044dee5a4e7bc94e https://www.encodeproject.org/files/ENCFF310JOS/@@download/ENCFF310JOS.bam hg19 released borderline replicate concordance, low read depth, missing genetic modification characterization ENCFF251YFI fastq reads ENCSR257XVY ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF83-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 1 50 single-ended 987341980 Kevin White, UChicago 37538a4231db9d11f67601e1a32933b6 SRA:SRR6212989 https://www.encodeproject.org/files/ENCFF251YFI/@@download/ENCFF251YFI.fastq.gz Illumina HiSeq 2500 /files/ENCFF278ATS/ released borderline replicate concordance, low read depth, missing genetic modification characterization ENCFF718QVM fastq reads ENCSR257XVY ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF83-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 1 50 single-ended 778985459 Kevin White, UChicago 601086199611096b6fb057fbc9c20a05 SRA:SRR6212987 https://www.encodeproject.org/files/ENCFF718QVM/@@download/ENCFF718QVM.fastq.gz Illumina HiSeq 2500 /files/ENCFF278ATS/ released borderline replicate concordance, low read depth, missing genetic modification characterization ENCFF471BMT fastq reads ENCSR257XVY ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF83-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 1 50 single-ended 1069901221 Kevin White, UChicago 7dc0ffce8a56bbb62d1e84b5b50b55b9 SRA:SRR6212988 https://www.encodeproject.org/files/ENCFF471BMT/@@download/ENCFF471BMT.fastq.gz Illumina HiSeq 2500 /files/ENCFF278ATS/ released borderline replicate concordance, low read depth, missing genetic modification characterization ENCFF306XER bam alignments ENCSR257XVY ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF83-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 50 ENCFF251YFI, ENCFF807MUK 806395489 ENCODE Processing Pipeline 9e82ebf237d5944758c27905cc96f527 https://www.encodeproject.org/files/ENCFF306XER/@@download/ENCFF306XER.bam hg19 released borderline replicate concordance, low read depth, missing genetic modification characterization ENCFF054RVU bam alignments ENCSR257XVY ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF83-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 50 ENCFF471BMT, ENCFF718QVM, ENCFF807MUK 1433880391 ENCODE Processing Pipeline bb85e933ff96e6f2f6ad7ac1fcfbc13f https://www.encodeproject.org/files/ENCFF054RVU/@@download/ENCFF054RVU.bam hg19 released borderline replicate concordance, low read depth, missing genetic modification characterization ENCFF888YDZ bigWig signal p-value ENCSR257XVY ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF83-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF054RVU, ENCFF285NOA 633269880 ENCODE Processing Pipeline 194d286d5abed72ec4929efd2ae4452d https://www.encodeproject.org/files/ENCFF888YDZ/@@download/ENCFF888YDZ.bigWig hg19 released borderline replicate concordance, low read depth, missing genetic modification characterization ENCFF506OVR bigWig signal p-value ENCSR257XVY ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF83-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF285NOA, ENCFF306XER 556562132 ENCODE Processing Pipeline 5cd305b74e77fd1f8bdf085c28dcccc6 https://www.encodeproject.org/files/ENCFF506OVR/@@download/ENCFF506OVR.bigWig hg19 released borderline replicate concordance, low read depth, missing genetic modification characterization ENCFF680LIE bigWig signal p-value ENCSR257XVY ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF83-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF054RVU, ENCFF285NOA, ENCFF306XER 618233614 ENCODE Processing Pipeline 21a13d65e7c6d57fca8f79ea8d36a34e https://www.encodeproject.org/files/ENCFF680LIE/@@download/ENCFF680LIE.bigWig hg19 released borderline replicate concordance, low read depth, missing genetic modification characterization ENCFF930RJR bigWig fold change over control ENCSR257XVY ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF83-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF285NOA, ENCFF306XER 434107325 ENCODE Processing Pipeline 0210ac90e22c91f75345badcd2ae7a72 https://www.encodeproject.org/files/ENCFF930RJR/@@download/ENCFF930RJR.bigWig hg19 released borderline replicate concordance, low read depth, missing genetic modification characterization ENCFF436QYG bigWig fold change over control ENCSR257XVY ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF83-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF054RVU, ENCFF285NOA 639281218 ENCODE Processing Pipeline 762495151065e60bb888cdf3d46f2962 https://www.encodeproject.org/files/ENCFF436QYG/@@download/ENCFF436QYG.bigWig hg19 released borderline replicate concordance, low read depth, missing genetic modification characterization ENCFF433QCW bigWig fold change over control ENCSR257XVY ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF83-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF054RVU, ENCFF285NOA, ENCFF306XER 862566721 ENCODE Processing Pipeline 7f69763535a33ca3200ea6063624dfe7 https://www.encodeproject.org/files/ENCFF433QCW/@@download/ENCFF433QCW.bigWig hg19 released borderline replicate concordance, low read depth, missing genetic modification characterization ENCFF392CTG bed narrowPeak peaks ENCSR257XVY ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF83-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF054RVU, ENCFF285NOA 6823970 ENCODE Processing Pipeline 75c3cf7db837a69224afe8ae47622624 https://www.encodeproject.org/files/ENCFF392CTG/@@download/ENCFF392CTG.bed.gz hg19 released borderline replicate concordance, low read depth, missing genetic modification characterization ENCFF254TMJ bed narrowPeak peaks ENCSR257XVY ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF83-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF285NOA, ENCFF306XER 6085191 ENCODE Processing Pipeline 2094ae886ce87c6e14bc9cd5117889d4 https://www.encodeproject.org/files/ENCFF254TMJ/@@download/ENCFF254TMJ.bed.gz hg19 released borderline replicate concordance, low read depth, missing genetic modification characterization ENCFF609KYL bed narrowPeak peaks ENCSR257XVY ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF83-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF054RVU, ENCFF285NOA, ENCFF306XER 7111238 ENCODE Processing Pipeline 6b367b80b7e5ad6ca9d8bab9b15f37a9 https://www.encodeproject.org/files/ENCFF609KYL/@@download/ENCFF609KYL.bed.gz hg19 released borderline replicate concordance, low read depth, missing genetic modification characterization ENCFF239VNX bigBed narrowPeak peaks ENCSR257XVY ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF83-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF609KYL 12969755 ENCODE Processing Pipeline 6fa08f4bf5e986b89d6258ac772428d6 https://www.encodeproject.org/files/ENCFF239VNX/@@download/ENCFF239VNX.bigBed hg19 released borderline replicate concordance, low read depth, missing genetic modification characterization ENCFF024MZT bigBed narrowPeak peaks ENCSR257XVY ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF83-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF254TMJ 13027743 ENCODE Processing Pipeline 47163244ca54ef2feb6ef449bdf81cae https://www.encodeproject.org/files/ENCFF024MZT/@@download/ENCFF024MZT.bigBed hg19 released borderline replicate concordance, low read depth, missing genetic modification characterization ENCFF470ZQS bigBed narrowPeak peaks ENCSR257XVY ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF83-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF392CTG 12905818 ENCODE Processing Pipeline ee6607e5cfc0fc15629190b25bf59a32 https://www.encodeproject.org/files/ENCFF470ZQS/@@download/ENCFF470ZQS.bigBed hg19 released borderline replicate concordance, low read depth, missing genetic modification characterization ENCFF223GIE bam unfiltered alignments ENCSR257XVY ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF83-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 50 ENCFF251YFI, ENCFF643CGH 1059093189 ENCODE Processing Pipeline b53ee11456e23ac9c2de4d5bf07685be https://www.encodeproject.org/files/ENCFF223GIE/@@download/ENCFF223GIE.bam GRCh38 released borderline replicate concordance, low read depth, missing genetic modification characterization ENCFF768ZIJ bam unfiltered alignments ENCSR257XVY ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF83-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 50 ENCFF471BMT, ENCFF643CGH, ENCFF718QVM 1972421674 ENCODE Processing Pipeline c17bda7a9ebf64081ed431f7bd28fcc6 https://www.encodeproject.org/files/ENCFF768ZIJ/@@download/ENCFF768ZIJ.bam GRCh38 released borderline replicate concordance, low read depth, missing genetic modification characterization ENCFF690YWW bam alignments ENCSR257XVY ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF83-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 50 ENCFF251YFI, ENCFF643CGH 805892387 ENCODE Processing Pipeline 470483e22f92c6455252fb4238cf48c6 https://www.encodeproject.org/files/ENCFF690YWW/@@download/ENCFF690YWW.bam GRCh38 released borderline replicate concordance, low read depth, missing genetic modification characterization ENCFF180ZQP bam alignments ENCSR257XVY ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF83-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 50 ENCFF471BMT, ENCFF643CGH, ENCFF718QVM 1433047478 ENCODE Processing Pipeline e073eb1b6460a8cb31b1d3e8b779cda8 https://www.encodeproject.org/files/ENCFF180ZQP/@@download/ENCFF180ZQP.bam GRCh38 released borderline replicate concordance, low read depth, missing genetic modification characterization ENCFF862DOC bigWig signal p-value ENCSR257XVY ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF83-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF180ZQP, ENCFF568OMP 638385534 ENCODE Processing Pipeline 55f41c24cfec71140dcd2d03e118cd08 https://www.encodeproject.org/files/ENCFF862DOC/@@download/ENCFF862DOC.bigWig GRCh38 released borderline replicate concordance, low read depth, missing genetic modification characterization ENCFF168MKV bigWig signal p-value ENCSR257XVY ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF83-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF568OMP, ENCFF690YWW 427985982 ENCODE Processing Pipeline 1f1697376d498dd2c0fc47f49adb4f02 https://www.encodeproject.org/files/ENCFF168MKV/@@download/ENCFF168MKV.bigWig GRCh38 released borderline replicate concordance, low read depth, missing genetic modification characterization ENCFF361MFE bigWig fold change over control ENCSR257XVY ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF83-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF180ZQP, ENCFF568OMP 645328038 ENCODE Processing Pipeline 8419f31d16b7d34dab521bd9742da9c0 https://www.encodeproject.org/files/ENCFF361MFE/@@download/ENCFF361MFE.bigWig GRCh38 released borderline replicate concordance, low read depth, missing genetic modification characterization ENCFF704QLJ bigWig signal p-value ENCSR257XVY ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF83-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF180ZQP, ENCFF568OMP, ENCFF690YWW 621080231 ENCODE Processing Pipeline 22cd2cfc568833fa2d60456e57797320 https://www.encodeproject.org/files/ENCFF704QLJ/@@download/ENCFF704QLJ.bigWig GRCh38 released borderline replicate concordance, low read depth, missing genetic modification characterization ENCFF699LOC bed narrowPeak peaks ENCSR257XVY ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF83-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF568OMP, ENCFF690YWW 5933518 ENCODE Processing Pipeline af2385cfd878b9af258ba8da04225c2f https://www.encodeproject.org/files/ENCFF699LOC/@@download/ENCFF699LOC.bed.gz GRCh38 released borderline replicate concordance, low read depth, missing genetic modification characterization ENCFF517BHV bigBed narrowPeak peaks ENCSR257XVY ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF83-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF582YXT 12915637 ENCODE Processing Pipeline 553b18e0846463f414044e1186c1e767 https://www.encodeproject.org/files/ENCFF517BHV/@@download/ENCFF517BHV.bigBed GRCh38 released borderline replicate concordance, low read depth, missing genetic modification characterization ENCFF178LET bigWig fold change over control ENCSR257XVY ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF83-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF568OMP, ENCFF690YWW 442829683 ENCODE Processing Pipeline 6d03dee32b2b12a3a0feed49448d95e8 https://www.encodeproject.org/files/ENCFF178LET/@@download/ENCFF178LET.bigWig GRCh38 released borderline replicate concordance, low read depth, missing genetic modification characterization ENCFF735BNC bigWig fold change over control ENCSR257XVY ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF83-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF180ZQP, ENCFF568OMP, ENCFF690YWW 861831367 ENCODE Processing Pipeline d2acf596b3b53545e41c5a4fdf1ea6df https://www.encodeproject.org/files/ENCFF735BNC/@@download/ENCFF735BNC.bigWig GRCh38 released borderline replicate concordance, low read depth, missing genetic modification characterization ENCFF344KDO bigBed narrowPeak peaks ENCSR257XVY ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF83-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF699LOC 13020215 ENCODE Processing Pipeline 41e0f0600c7121f3da2f7720cd7e813b https://www.encodeproject.org/files/ENCFF344KDO/@@download/ENCFF344KDO.bigBed GRCh38 released borderline replicate concordance, low read depth, missing genetic modification characterization ENCFF795RXR bigBed narrowPeak optimal idr thresholded peaks ENCSR257XVY ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF83-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF791JWI 556142 ENCODE Processing Pipeline efe67bd04f255c09cfa13a1abce17b5e https://www.encodeproject.org/files/ENCFF795RXR/@@download/ENCFF795RXR.bigBed GRCh38 released borderline replicate concordance, low read depth, missing genetic modification characterization ENCFF992JUC bed narrowPeak peaks ENCSR257XVY ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF83-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF180ZQP, ENCFF568OMP, ENCFF690YWW 6990183 ENCODE Processing Pipeline 920787dc67c53e37815dd3e165a66a80 https://www.encodeproject.org/files/ENCFF992JUC/@@download/ENCFF992JUC.bed.gz GRCh38 released borderline replicate concordance, low read depth, missing genetic modification characterization ENCFF582YXT bed narrowPeak peaks ENCSR257XVY ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF83-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF180ZQP, ENCFF568OMP 6669571 ENCODE Processing Pipeline fa2e93ec3cf8dcc80f5494adf35d174c https://www.encodeproject.org/files/ENCFF582YXT/@@download/ENCFF582YXT.bed.gz GRCh38 released borderline replicate concordance, low read depth, missing genetic modification characterization ENCFF389MXB bigBed narrowPeak peaks ENCSR257XVY ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF83-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF992JUC 12974620 ENCODE Processing Pipeline 9b4251ce591387b2891256e8e44320ca https://www.encodeproject.org/files/ENCFF389MXB/@@download/ENCFF389MXB.bigBed GRCh38 released borderline replicate concordance, low read depth, missing genetic modification characterization ENCFF675TCT bed narrowPeak conservative idr thresholded peaks ENCSR257XVY ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF83-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF419RSJ, ENCFF582YXT, ENCFF699LOC, ENCFF992JUC 190968 ENCODE Processing Pipeline 59d9c3727b85b95b6df2df0b0aa865e2 https://www.encodeproject.org/files/ENCFF675TCT/@@download/ENCFF675TCT.bed.gz GRCh38 released borderline replicate concordance, low read depth, missing genetic modification characterization ENCFF015KFR bigBed narrowPeak conservative idr thresholded peaks ENCSR257XVY ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF83-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF675TCT 494373 ENCODE Processing Pipeline bc9828173fe759b0f44e6db5cc2f3e76 https://www.encodeproject.org/files/ENCFF015KFR/@@download/ENCFF015KFR.bigBed GRCh38 released borderline replicate concordance, low read depth, missing genetic modification characterization ENCFF791JWI bed narrowPeak optimal idr thresholded peaks ENCSR257XVY ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF83-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF419RSJ, ENCFF582YXT, ENCFF699LOC, ENCFF992JUC 223942 ENCODE Processing Pipeline b561c235f2f24be86a30be2d0cd4b3eb https://www.encodeproject.org/files/ENCFF791JWI/@@download/ENCFF791JWI.bed.gz GRCh38 released borderline replicate concordance, low read depth, missing genetic modification characterization ENCFF143SUE bigBed narrowPeak conservative idr thresholded peaks ENCSR257XVY ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF83-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF755MMS 299635 ENCODE Processing Pipeline 65b174a363279287a897e10a2bc3e7f1 https://www.encodeproject.org/files/ENCFF143SUE/@@download/ENCFF143SUE.bigBed hg19 released borderline replicate concordance, low read depth, missing genetic modification characterization ENCFF755MMS bed narrowPeak conservative idr thresholded peaks ENCSR257XVY ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF83-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF001TDO, ENCFF254TMJ, ENCFF392CTG, ENCFF609KYL 151974 ENCODE Processing Pipeline 1b104cb0e83786c9e20c34ab5fa36631 https://www.encodeproject.org/files/ENCFF755MMS/@@download/ENCFF755MMS.bed.gz hg19 released borderline replicate concordance, low read depth, missing genetic modification characterization ENCFF654BMD bed narrowPeak optimal idr thresholded peaks ENCSR257XVY ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF83-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF001TDO, ENCFF254TMJ, ENCFF392CTG, ENCFF609KYL 174216 ENCODE Processing Pipeline 23427149d84edb0eff7ef3d6750b8089 https://www.encodeproject.org/files/ENCFF654BMD/@@download/ENCFF654BMD.bed.gz hg19 released borderline replicate concordance, low read depth, missing genetic modification characterization ENCFF180MZG bigBed narrowPeak optimal idr thresholded peaks ENCSR257XVY ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF83-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF654BMD 401222 ENCODE Processing Pipeline 39a19c020f42f2cc5e7d6f1b62f19410 https://www.encodeproject.org/files/ENCFF180MZG/@@download/ENCFF180MZG.bigBed hg19 released borderline replicate concordance, low read depth, missing genetic modification characterization ENCFF404NEP fastq reads ENCSR792IYC ChIP-seq EFO:0002067 K562 cell line Homo sapiens BCLAF1-human ENCAB733KID DNA False 2018-01-26 ENCODE 2 1 100 paired-ended 1 ENCFF355NCQ 2539498717 Michael Snyder, Stanford eb5705e9385c5293f7186900cebbaab8 https://www.encodeproject.org/files/ENCFF404NEP/@@download/ENCFF404NEP.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFD/ released borderline replicate concordance, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF355NCQ fastq reads ENCSR792IYC ChIP-seq EFO:0002067 K562 cell line Homo sapiens BCLAF1-human ENCAB733KID DNA False 2018-01-26 ENCODE 2 1 100 paired-ended 2 ENCFF404NEP 2576583398 Michael Snyder, Stanford 77821bd4589bbacd14e2085d05f62cb3 https://www.encodeproject.org/files/ENCFF355NCQ/@@download/ENCFF355NCQ.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFA/ released borderline replicate concordance, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF801FWC fastq reads ENCSR792IYC ChIP-seq EFO:0002067 K562 cell line Homo sapiens BCLAF1-human ENCAB733KID DNA False 2018-01-26 ENCODE 1 1 100 paired-ended 1 ENCFF455GIL 2396839718 Michael Snyder, Stanford aa38f29da81e402a7c9a139e42b5b008 https://www.encodeproject.org/files/ENCFF801FWC/@@download/ENCFF801FWC.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFF/ released borderline replicate concordance, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF455GIL fastq reads ENCSR792IYC ChIP-seq EFO:0002067 K562 cell line Homo sapiens BCLAF1-human ENCAB733KID DNA False 2018-01-26 ENCODE 1 1 100 paired-ended 2 ENCFF801FWC 2433631348 Michael Snyder, Stanford 3fe942a870c805ed982daf8e2c61bab5 https://www.encodeproject.org/files/ENCFF455GIL/@@download/ENCFF455GIL.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFH/ released borderline replicate concordance, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF497HJM bam unfiltered alignments ENCSR792IYC ChIP-seq EFO:0002067 K562 cell line Homo sapiens BCLAF1-human ENCAB733KID DNA False 2018-01-26 ENCODE 2 100 ENCFF355NCQ, ENCFF404NEP, ENCFF643CGH 5494025977 ENCODE Processing Pipeline f9f15d19374254af3a9bf8f4effb353c https://www.encodeproject.org/files/ENCFF497HJM/@@download/ENCFF497HJM.bam GRCh38 released borderline replicate concordance, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF254LLT bam alignments ENCSR792IYC ChIP-seq EFO:0002067 K562 cell line Homo sapiens BCLAF1-human ENCAB733KID DNA False 2018-01-26 ENCODE 1 100 ENCFF455GIL, ENCFF643CGH, ENCFF801FWC 3890414007 ENCODE Processing Pipeline 04778eb9876aca243fc9960579bd3a1f https://www.encodeproject.org/files/ENCFF254LLT/@@download/ENCFF254LLT.bam GRCh38 released borderline replicate concordance, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF150YTV bam unfiltered alignments ENCSR792IYC ChIP-seq EFO:0002067 K562 cell line Homo sapiens BCLAF1-human ENCAB733KID DNA False 2018-01-26 ENCODE 1 100 ENCFF455GIL, ENCFF643CGH, ENCFF801FWC 5230562763 ENCODE Processing Pipeline 5eccef286eecc8465ee816cdb57ed8c1 https://www.encodeproject.org/files/ENCFF150YTV/@@download/ENCFF150YTV.bam GRCh38 released borderline replicate concordance, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF615VMZ bam alignments ENCSR792IYC ChIP-seq EFO:0002067 K562 cell line Homo sapiens BCLAF1-human ENCAB733KID DNA False 2018-01-26 ENCODE 2 100 ENCFF355NCQ, ENCFF404NEP, ENCFF643CGH 4002336687 ENCODE Processing Pipeline eb68616129791dacb05b6d95aafdcb63 https://www.encodeproject.org/files/ENCFF615VMZ/@@download/ENCFF615VMZ.bam GRCh38 released borderline replicate concordance, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF101OLZ bigBed narrowPeak peaks ENCSR792IYC ChIP-seq EFO:0002067 K562 cell line Homo sapiens BCLAF1-human ENCAB733KID DNA False 2018-01-26 ENCODE 1, 2 ENCFF628OPB 11151268 ENCODE Processing Pipeline 416704d84593bbb7a142356f34c841f6 https://www.encodeproject.org/files/ENCFF101OLZ/@@download/ENCFF101OLZ.bigBed GRCh38 released borderline replicate concordance, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF903ZBV bigWig signal p-value ENCSR792IYC ChIP-seq EFO:0002067 K562 cell line Homo sapiens BCLAF1-human ENCAB733KID DNA False 2018-01-26 ENCODE 2 ENCFF615VMZ 1102025723 ENCODE Processing Pipeline 98636ab90acacdc0e4522e883ba9738b https://www.encodeproject.org/files/ENCFF903ZBV/@@download/ENCFF903ZBV.bigWig GRCh38 released borderline replicate concordance, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF247KYH bigWig signal p-value ENCSR792IYC ChIP-seq EFO:0002067 K562 cell line Homo sapiens BCLAF1-human ENCAB733KID DNA False 2018-01-26 ENCODE 1, 2 ENCFF254LLT, ENCFF615VMZ 1672222976 ENCODE Processing Pipeline 9bbad7e74a96bc6c5fd8fcb037bd6876 https://www.encodeproject.org/files/ENCFF247KYH/@@download/ENCFF247KYH.bigWig GRCh38 released borderline replicate concordance, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF089TYY bigWig fold change over control ENCSR792IYC ChIP-seq EFO:0002067 K562 cell line Homo sapiens BCLAF1-human ENCAB733KID DNA False 2018-01-26 ENCODE 2 ENCFF615VMZ 1088912495 ENCODE Processing Pipeline a444c153d6ff2cb54b280859b8f42205 https://www.encodeproject.org/files/ENCFF089TYY/@@download/ENCFF089TYY.bigWig GRCh38 released borderline replicate concordance, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF478IFD bed narrowPeak conservative idr thresholded peaks ENCSR792IYC ChIP-seq EFO:0002067 K562 cell line Homo sapiens BCLAF1-human ENCAB733KID DNA False 2018-01-26 ENCODE 1, 2 ENCFF249ABV, ENCFF419RSJ, ENCFF628OPB, ENCFF774CMI 16381 ENCODE Processing Pipeline e86211e3309e6217bc1b79e2729be117 https://www.encodeproject.org/files/ENCFF478IFD/@@download/ENCFF478IFD.bed.gz GRCh38 released borderline replicate concordance, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF736JOY bigWig signal p-value ENCSR792IYC ChIP-seq EFO:0002067 K562 cell line Homo sapiens BCLAF1-human ENCAB733KID DNA False 2018-01-26 ENCODE 1 ENCFF254LLT 1049926324 ENCODE Processing Pipeline c123001cfb28bc48ec330a29e0835402 https://www.encodeproject.org/files/ENCFF736JOY/@@download/ENCFF736JOY.bigWig GRCh38 released borderline replicate concordance, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF602XBX bigBed narrowPeak peaks ENCSR792IYC ChIP-seq EFO:0002067 K562 cell line Homo sapiens BCLAF1-human ENCAB733KID DNA False 2018-01-26 ENCODE 2 ENCFF249ABV 11277692 ENCODE Processing Pipeline e0dde71534821cf37a0d0bc810918a6c https://www.encodeproject.org/files/ENCFF602XBX/@@download/ENCFF602XBX.bigBed GRCh38 released borderline replicate concordance, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF774CMI bed narrowPeak peaks ENCSR792IYC ChIP-seq EFO:0002067 K562 cell line Homo sapiens BCLAF1-human ENCAB733KID DNA False 2018-01-26 ENCODE 1 ENCFF254LLT 5730955 ENCODE Processing Pipeline 2e1d48d35e5525394386017f7ad234fc https://www.encodeproject.org/files/ENCFF774CMI/@@download/ENCFF774CMI.bed.gz GRCh38 released borderline replicate concordance, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF249ABV bed narrowPeak peaks ENCSR792IYC ChIP-seq EFO:0002067 K562 cell line Homo sapiens BCLAF1-human ENCAB733KID DNA False 2018-01-26 ENCODE 2 ENCFF615VMZ 5671758 ENCODE Processing Pipeline cf23b847fb636bf2951c7346a2114296 https://www.encodeproject.org/files/ENCFF249ABV/@@download/ENCFF249ABV.bed.gz GRCh38 released borderline replicate concordance, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF094XPM bed narrowPeak optimal idr thresholded peaks ENCSR792IYC ChIP-seq EFO:0002067 K562 cell line Homo sapiens BCLAF1-human ENCAB733KID DNA False 2018-01-26 ENCODE 1, 2 ENCFF249ABV, ENCFF419RSJ, ENCFF628OPB, ENCFF774CMI 38374 ENCODE Processing Pipeline 2c022b5939304c36a2949f7d583a06b6 https://www.encodeproject.org/files/ENCFF094XPM/@@download/ENCFF094XPM.bed.gz GRCh38 released borderline replicate concordance, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF628OPB bed narrowPeak peaks ENCSR792IYC ChIP-seq EFO:0002067 K562 cell line Homo sapiens BCLAF1-human ENCAB733KID DNA False 2018-01-26 ENCODE 1, 2 ENCFF254LLT, ENCFF615VMZ 6916082 ENCODE Processing Pipeline 9321218f706121d6e4d4854d1ee75c00 https://www.encodeproject.org/files/ENCFF628OPB/@@download/ENCFF628OPB.bed.gz GRCh38 released borderline replicate concordance, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF951GNT bigBed narrowPeak peaks ENCSR792IYC ChIP-seq EFO:0002067 K562 cell line Homo sapiens BCLAF1-human ENCAB733KID DNA False 2018-01-26 ENCODE 1 ENCFF774CMI 11192147 ENCODE Processing Pipeline 270121c57518bcf32fabd24e278ce897 https://www.encodeproject.org/files/ENCFF951GNT/@@download/ENCFF951GNT.bigBed GRCh38 released borderline replicate concordance, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF554OJO bigBed narrowPeak conservative idr thresholded peaks ENCSR792IYC ChIP-seq EFO:0002067 K562 cell line Homo sapiens BCLAF1-human ENCAB733KID DNA False 2018-01-26 ENCODE 1, 2 ENCFF478IFD 99395 ENCODE Processing Pipeline d919f7cca26c55994ea58bdae0d00fec https://www.encodeproject.org/files/ENCFF554OJO/@@download/ENCFF554OJO.bigBed GRCh38 released borderline replicate concordance, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF892TYC bigBed narrowPeak optimal idr thresholded peaks ENCSR792IYC ChIP-seq EFO:0002067 K562 cell line Homo sapiens BCLAF1-human ENCAB733KID DNA False 2018-01-26 ENCODE 1, 2 ENCFF094XPM 146333 ENCODE Processing Pipeline 7c5c464551c6d0989f333ba274d13b11 https://www.encodeproject.org/files/ENCFF892TYC/@@download/ENCFF892TYC.bigBed GRCh38 released borderline replicate concordance, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF365MIR bigWig fold change over control ENCSR792IYC ChIP-seq EFO:0002067 K562 cell line Homo sapiens BCLAF1-human ENCAB733KID DNA False 2018-01-26 ENCODE 1 ENCFF254LLT 1096616742 ENCODE Processing Pipeline 3d50c59a9d88b62ac1ead9c7fedfff46 https://www.encodeproject.org/files/ENCFF365MIR/@@download/ENCFF365MIR.bigWig GRCh38 released borderline replicate concordance, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF305XLQ bigWig fold change over control ENCSR792IYC ChIP-seq EFO:0002067 K562 cell line Homo sapiens BCLAF1-human ENCAB733KID DNA False 2018-01-26 ENCODE 1, 2 ENCFF254LLT, ENCFF615VMZ 2025963926 ENCODE Processing Pipeline 15cc4d33f3d3a5508b7e62612e8b24c6 https://www.encodeproject.org/files/ENCFF305XLQ/@@download/ENCFF305XLQ.bigWig GRCh38 released borderline replicate concordance, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF633AHF bam unfiltered alignments ENCSR792IYC ChIP-seq EFO:0002067 K562 cell line Homo sapiens BCLAF1-human ENCAB733KID DNA False 2018-01-26 ENCODE 2 100 ENCFF355NCQ, ENCFF404NEP, ENCFF807MUK 5490316304 ENCODE Processing Pipeline c64004475230dc4ddd4887fc0ffed130 https://www.encodeproject.org/files/ENCFF633AHF/@@download/ENCFF633AHF.bam hg19 released borderline replicate concordance, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF665FLL bam unfiltered alignments ENCSR792IYC ChIP-seq EFO:0002067 K562 cell line Homo sapiens BCLAF1-human ENCAB733KID DNA False 2018-01-26 ENCODE 1 100 ENCFF455GIL, ENCFF801FWC, ENCFF807MUK 5226659356 ENCODE Processing Pipeline fd323a5d98832681016d4c23f3377cbf https://www.encodeproject.org/files/ENCFF665FLL/@@download/ENCFF665FLL.bam hg19 released borderline replicate concordance, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF780RFE bam alignments ENCSR792IYC ChIP-seq EFO:0002067 K562 cell line Homo sapiens BCLAF1-human ENCAB733KID DNA False 2018-01-26 ENCODE 2 100 ENCFF355NCQ, ENCFF404NEP, ENCFF807MUK 3999419237 ENCODE Processing Pipeline f311896c0e46ea900be8215d9546cb3d https://www.encodeproject.org/files/ENCFF780RFE/@@download/ENCFF780RFE.bam hg19 released borderline replicate concordance, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF264WWV bam alignments ENCSR792IYC ChIP-seq EFO:0002067 K562 cell line Homo sapiens BCLAF1-human ENCAB733KID DNA False 2018-01-26 ENCODE 1 100 ENCFF455GIL, ENCFF801FWC, ENCFF807MUK 3888439657 ENCODE Processing Pipeline 41d0138cd75ea13e380867704f465952 https://www.encodeproject.org/files/ENCFF264WWV/@@download/ENCFF264WWV.bam hg19 released borderline replicate concordance, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF974NAJ bigWig signal p-value ENCSR792IYC ChIP-seq EFO:0002067 K562 cell line Homo sapiens BCLAF1-human ENCAB733KID DNA False 2018-01-26 ENCODE 1 ENCFF264WWV, ENCFF581ZJL 970930247 ENCODE Processing Pipeline a9a069ea2534029a7ef157de79a79b09 https://www.encodeproject.org/files/ENCFF974NAJ/@@download/ENCFF974NAJ.bigWig hg19 released borderline replicate concordance, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF601EZO bigWig signal p-value ENCSR792IYC ChIP-seq EFO:0002067 K562 cell line Homo sapiens BCLAF1-human ENCAB733KID DNA False 2018-01-26 ENCODE 2 ENCFF051LWI, ENCFF780RFE 952748319 ENCODE Processing Pipeline 7e65b10590a83745a3bbdcca0e5b9bab https://www.encodeproject.org/files/ENCFF601EZO/@@download/ENCFF601EZO.bigWig hg19 released borderline replicate concordance, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF516LKO bigWig signal p-value ENCSR792IYC ChIP-seq EFO:0002067 K562 cell line Homo sapiens BCLAF1-human ENCAB733KID DNA False 2018-01-26 ENCODE 1, 2 ENCFF051LWI, ENCFF264WWV, ENCFF581ZJL, ENCFF780RFE 1759898337 ENCODE Processing Pipeline 53fdb675a4d96a8b8212a81117f130cb https://www.encodeproject.org/files/ENCFF516LKO/@@download/ENCFF516LKO.bigWig hg19 released borderline replicate concordance, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF765PCR bigWig fold change over control ENCSR792IYC ChIP-seq EFO:0002067 K562 cell line Homo sapiens BCLAF1-human ENCAB733KID DNA False 2018-01-26 ENCODE 1 ENCFF264WWV, ENCFF581ZJL 1097617176 ENCODE Processing Pipeline 4b83d835c1a03285b91755f8b289bc43 https://www.encodeproject.org/files/ENCFF765PCR/@@download/ENCFF765PCR.bigWig hg19 released borderline replicate concordance, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF519QDT bed narrowPeak peaks ENCSR792IYC ChIP-seq EFO:0002067 K562 cell line Homo sapiens BCLAF1-human ENCAB733KID DNA False 2018-01-26 ENCODE 1, 2 ENCFF051LWI, ENCFF264WWV, ENCFF581ZJL, ENCFF780RFE 6911391 ENCODE Processing Pipeline 415635e07e7485975e6d987bd77b6789 https://www.encodeproject.org/files/ENCFF519QDT/@@download/ENCFF519QDT.bed.gz hg19 released borderline replicate concordance, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF002NNQ bed narrowPeak peaks ENCSR792IYC ChIP-seq EFO:0002067 K562 cell line Homo sapiens BCLAF1-human ENCAB733KID DNA False 2018-01-26 ENCODE 2 ENCFF051LWI, ENCFF780RFE 5669054 ENCODE Processing Pipeline f6cd593476efa8c5c75daf455dae72c3 https://www.encodeproject.org/files/ENCFF002NNQ/@@download/ENCFF002NNQ.bed.gz hg19 released borderline replicate concordance, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF087GYK bigBed narrowPeak conservative idr thresholded peaks ENCSR792IYC ChIP-seq EFO:0002067 K562 cell line Homo sapiens BCLAF1-human ENCAB733KID DNA False 2018-01-26 ENCODE 1, 2 ENCFF145KNX 97697 ENCODE Processing Pipeline 3f5069303b5d81b13b535ef646f4c9f6 https://www.encodeproject.org/files/ENCFF087GYK/@@download/ENCFF087GYK.bigBed hg19 released borderline replicate concordance, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF818GXC bigWig fold change over control ENCSR792IYC ChIP-seq EFO:0002067 K562 cell line Homo sapiens BCLAF1-human ENCAB733KID DNA False 2018-01-26 ENCODE 2 ENCFF051LWI, ENCFF780RFE 1086978429 ENCODE Processing Pipeline 7db3b40f92e5d20a52f9c02d547ab37f https://www.encodeproject.org/files/ENCFF818GXC/@@download/ENCFF818GXC.bigWig hg19 released borderline replicate concordance, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF151NHI bigWig fold change over control ENCSR792IYC ChIP-seq EFO:0002067 K562 cell line Homo sapiens BCLAF1-human ENCAB733KID DNA False 2018-01-26 ENCODE 1, 2 ENCFF051LWI, ENCFF264WWV, ENCFF581ZJL, ENCFF780RFE 2050584764 ENCODE Processing Pipeline af31c34077c3ef9e88eee729b2d45afe https://www.encodeproject.org/files/ENCFF151NHI/@@download/ENCFF151NHI.bigWig hg19 released borderline replicate concordance, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF247BLA bigBed narrowPeak peaks ENCSR792IYC ChIP-seq EFO:0002067 K562 cell line Homo sapiens BCLAF1-human ENCAB733KID DNA False 2018-01-26 ENCODE 2 ENCFF002NNQ 11256854 ENCODE Processing Pipeline e59374ff05d11c74736579f1cf3a2525 https://www.encodeproject.org/files/ENCFF247BLA/@@download/ENCFF247BLA.bigBed hg19 released borderline replicate concordance, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF398TWC bed narrowPeak optimal idr thresholded peaks ENCSR792IYC ChIP-seq EFO:0002067 K562 cell line Homo sapiens BCLAF1-human ENCAB733KID DNA False 2018-01-26 ENCODE 1, 2 ENCFF001TDO, ENCFF002NNQ, ENCFF039VDD, ENCFF519QDT 39607 ENCODE Processing Pipeline 95c94c1100d8e4fdb273a6e4dda01157 https://www.encodeproject.org/files/ENCFF398TWC/@@download/ENCFF398TWC.bed.gz hg19 released borderline replicate concordance, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF039VDD bed narrowPeak peaks ENCSR792IYC ChIP-seq EFO:0002067 K562 cell line Homo sapiens BCLAF1-human ENCAB733KID DNA False 2018-01-26 ENCODE 1 ENCFF264WWV, ENCFF581ZJL 5728057 ENCODE Processing Pipeline 0cca0ee2088dd951e375f9451e72b208 https://www.encodeproject.org/files/ENCFF039VDD/@@download/ENCFF039VDD.bed.gz hg19 released borderline replicate concordance, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF145KNX bed narrowPeak conservative idr thresholded peaks ENCSR792IYC ChIP-seq EFO:0002067 K562 cell line Homo sapiens BCLAF1-human ENCAB733KID DNA False 2018-01-26 ENCODE 1, 2 ENCFF001TDO, ENCFF002NNQ, ENCFF039VDD, ENCFF519QDT 16270 ENCODE Processing Pipeline 1b865f82d0bd75180d79f396ff163910 https://www.encodeproject.org/files/ENCFF145KNX/@@download/ENCFF145KNX.bed.gz hg19 released borderline replicate concordance, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF818PVV bigBed narrowPeak optimal idr thresholded peaks ENCSR792IYC ChIP-seq EFO:0002067 K562 cell line Homo sapiens BCLAF1-human ENCAB733KID DNA False 2018-01-26 ENCODE 1, 2 ENCFF398TWC 147340 ENCODE Processing Pipeline d14a8132a30ba4ca19f66821c7af8e0c https://www.encodeproject.org/files/ENCFF818PVV/@@download/ENCFF818PVV.bigBed hg19 released borderline replicate concordance, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF682YTU bigBed narrowPeak peaks ENCSR792IYC ChIP-seq EFO:0002067 K562 cell line Homo sapiens BCLAF1-human ENCAB733KID DNA False 2018-01-26 ENCODE 1 ENCFF039VDD 11179318 ENCODE Processing Pipeline ceac90860fdd5f722a7d4abd3352042d https://www.encodeproject.org/files/ENCFF682YTU/@@download/ENCFF682YTU.bigBed hg19 released borderline replicate concordance, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF509PPX bigBed narrowPeak peaks ENCSR792IYC ChIP-seq EFO:0002067 K562 cell line Homo sapiens BCLAF1-human ENCAB733KID DNA False 2018-01-26 ENCODE 1, 2 ENCFF519QDT 11135539 ENCODE Processing Pipeline f6e6917afac12163c529c4d6148b1efe https://www.encodeproject.org/files/ENCFF509PPX/@@download/ENCFF509PPX.bigBed hg19 released borderline replicate concordance, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF907JIE fastq reads ENCSR563LLO ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F1-human ENCAB851KCY DNA False 2016-07-08 ENCODE 2 1 100 paired-ended 1 ENCFF399CCC 2247468831 Michael Snyder, Stanford f803648c02f1fd83256344426e557179 SRA:SRR6213842 https://www.encodeproject.org/files/ENCFF907JIE/@@download/ENCFF907JIE.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFD/ released low read depth, mild to moderate bottlenecking ENCFF749JUG fastq reads ENCSR563LLO ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F1-human ENCAB851KCY DNA False 2016-07-08 ENCODE 1 1 100 paired-ended 1 ENCFF942QFN 1387013792 Michael Snyder, Stanford ed11fdb833504d89cbdaa80195bb6342 SRA:SRR6213843 https://www.encodeproject.org/files/ENCFF749JUG/@@download/ENCFF749JUG.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFF/ released low read depth, mild to moderate bottlenecking ENCFF942QFN fastq reads ENCSR563LLO ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F1-human ENCAB851KCY DNA False 2016-07-08 ENCODE 1 1 100 paired-ended 2 ENCFF749JUG 1425690963 Michael Snyder, Stanford d8dcb2e02f9e5a5d223fd20e18231279 SRA:SRR6213843 https://www.encodeproject.org/files/ENCFF942QFN/@@download/ENCFF942QFN.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFH/ released low read depth, mild to moderate bottlenecking ENCFF399CCC fastq reads ENCSR563LLO ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F1-human ENCAB851KCY DNA False 2016-07-08 ENCODE 2 1 100 paired-ended 2 ENCFF907JIE 2324803844 Michael Snyder, Stanford 9c42e977da8c0e46d264c46fc58bf1ce SRA:SRR6213842 https://www.encodeproject.org/files/ENCFF399CCC/@@download/ENCFF399CCC.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFA/ released low read depth, mild to moderate bottlenecking ENCFF483UIU bam alignments ENCSR563LLO ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F1-human ENCAB851KCY DNA False 2016-07-08 ENCODE 1 100 ENCFF749JUG, ENCFF807MUK, ENCFF942QFN 2260492133 ENCODE Processing Pipeline c0c7a3b8347658aaabcc92c6a346a14b https://www.encodeproject.org/files/ENCFF483UIU/@@download/ENCFF483UIU.bam hg19 released low read depth, mild to moderate bottlenecking ENCFF768VEY bam alignments ENCSR563LLO ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F1-human ENCAB851KCY DNA False 2016-07-08 ENCODE 2 100 ENCFF399CCC, ENCFF807MUK, ENCFF907JIE 3775558260 ENCODE Processing Pipeline 27c52a68a79f17c8217aeb835f83662d https://www.encodeproject.org/files/ENCFF768VEY/@@download/ENCFF768VEY.bam hg19 released low read depth, mild to moderate bottlenecking ENCFF094JXS bigWig signal p-value ENCSR563LLO ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F1-human ENCAB851KCY DNA False 2016-07-08 ENCODE 1 ENCFF483UIU, ENCFF581ZJL 998753202 ENCODE Processing Pipeline 86920756a16a2d189ddfd9dfe6bf3b33 https://www.encodeproject.org/files/ENCFF094JXS/@@download/ENCFF094JXS.bigWig hg19 released low read depth, mild to moderate bottlenecking ENCFF056UGX bigWig signal p-value ENCSR563LLO ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F1-human ENCAB851KCY DNA False 2016-07-08 ENCODE 2 ENCFF051LWI, ENCFF768VEY 1034454870 ENCODE Processing Pipeline dd10daf760dba79c49de1eccd02670c4 https://www.encodeproject.org/files/ENCFF056UGX/@@download/ENCFF056UGX.bigWig hg19 released low read depth, mild to moderate bottlenecking ENCFF265XUO bigWig fold change over control ENCSR563LLO ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F1-human ENCAB851KCY DNA False 2016-07-08 ENCODE 1 ENCFF483UIU, ENCFF581ZJL 874883309 ENCODE Processing Pipeline bc5c331c2202b1eacd11a228b65c0d38 https://www.encodeproject.org/files/ENCFF265XUO/@@download/ENCFF265XUO.bigWig hg19 released low read depth, mild to moderate bottlenecking ENCFF803IRQ bigWig signal p-value ENCSR563LLO ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F1-human ENCAB851KCY DNA False 2016-07-08 ENCODE 1, 2 ENCFF051LWI, ENCFF483UIU, ENCFF581ZJL, ENCFF768VEY 1612566817 ENCODE Processing Pipeline 726abd5acf49e2b4a956aaf8e39ab467 https://www.encodeproject.org/files/ENCFF803IRQ/@@download/ENCFF803IRQ.bigWig hg19 released low read depth, mild to moderate bottlenecking ENCFF085AQM bigWig fold change over control ENCSR563LLO ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F1-human ENCAB851KCY DNA False 2016-07-08 ENCODE 2 ENCFF051LWI, ENCFF768VEY 1065841213 ENCODE Processing Pipeline 30f52e81b43673ee50b8eb9ca7aca353 https://www.encodeproject.org/files/ENCFF085AQM/@@download/ENCFF085AQM.bigWig hg19 released low read depth, mild to moderate bottlenecking ENCFF710KKZ bed narrowPeak peaks ENCSR563LLO ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F1-human ENCAB851KCY DNA False 2016-07-08 ENCODE 2 ENCFF051LWI, ENCFF768VEY 6525420 ENCODE Processing Pipeline 8101449533063d4491dcd437c4d4400e https://www.encodeproject.org/files/ENCFF710KKZ/@@download/ENCFF710KKZ.bed.gz hg19 released low read depth, mild to moderate bottlenecking ENCFF009LGS bigWig fold change over control ENCSR563LLO ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F1-human ENCAB851KCY DNA False 2016-07-08 ENCODE 1, 2 ENCFF051LWI, ENCFF483UIU, ENCFF581ZJL, ENCFF768VEY 1867390231 ENCODE Processing Pipeline 22ea6b88382259dc3d50617a8edc76f4 https://www.encodeproject.org/files/ENCFF009LGS/@@download/ENCFF009LGS.bigWig hg19 released low read depth, mild to moderate bottlenecking ENCFF218RJK bed narrowPeak peaks ENCSR563LLO ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F1-human ENCAB851KCY DNA False 2016-07-08 ENCODE 1 ENCFF483UIU, ENCFF581ZJL 6233227 ENCODE Processing Pipeline 90c9ab711eba70a009b0589ea7057131 https://www.encodeproject.org/files/ENCFF218RJK/@@download/ENCFF218RJK.bed.gz hg19 released low read depth, mild to moderate bottlenecking ENCFF159RHZ bed narrowPeak peaks ENCSR563LLO ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F1-human ENCAB851KCY DNA False 2016-07-08 ENCODE 1, 2 ENCFF051LWI, ENCFF483UIU, ENCFF581ZJL, ENCFF768VEY 7148672 ENCODE Processing Pipeline 54ce759192f750f3ffc29b6826cdc475 https://www.encodeproject.org/files/ENCFF159RHZ/@@download/ENCFF159RHZ.bed.gz hg19 released low read depth, mild to moderate bottlenecking ENCFF332UTX bigBed narrowPeak peaks ENCSR563LLO ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F1-human ENCAB851KCY DNA False 2016-07-08 ENCODE 2 ENCFF710KKZ 13275977 ENCODE Processing Pipeline 95e48097216ae7052fef9413125a1627 https://www.encodeproject.org/files/ENCFF332UTX/@@download/ENCFF332UTX.bigBed hg19 released low read depth, mild to moderate bottlenecking ENCFF810SHM bigBed narrowPeak peaks ENCSR563LLO ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F1-human ENCAB851KCY DNA False 2016-07-08 ENCODE 1 ENCFF218RJK 13373367 ENCODE Processing Pipeline 6de3cb11b1bf8625a91d41f53fb2813d https://www.encodeproject.org/files/ENCFF810SHM/@@download/ENCFF810SHM.bigBed hg19 released low read depth, mild to moderate bottlenecking ENCFF363NZL bigBed narrowPeak peaks ENCSR563LLO ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F1-human ENCAB851KCY DNA False 2016-07-08 ENCODE 1, 2 ENCFF159RHZ 13240772 ENCODE Processing Pipeline a2dacc74bf5ba22514b4efe08cdc9912 https://www.encodeproject.org/files/ENCFF363NZL/@@download/ENCFF363NZL.bigBed hg19 released low read depth, mild to moderate bottlenecking ENCFF606KRZ bam unfiltered alignments ENCSR563LLO ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F1-human ENCAB851KCY DNA False 2016-07-08 ENCODE 1 100 ENCFF643CGH, ENCFF749JUG, ENCFF942QFN 3054106769 ENCODE Processing Pipeline 9e9441b63ffbc4479f518c2ee7bb6d07 https://www.encodeproject.org/files/ENCFF606KRZ/@@download/ENCFF606KRZ.bam GRCh38 released low read depth, mild to moderate bottlenecking ENCFF757DMU bam unfiltered alignments ENCSR563LLO ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F1-human ENCAB851KCY DNA False 2016-07-08 ENCODE 2 100 ENCFF399CCC, ENCFF643CGH, ENCFF907JIE 4941081514 ENCODE Processing Pipeline e2b32a87dc9fc2e90fda2e43fb49c3d8 https://www.encodeproject.org/files/ENCFF757DMU/@@download/ENCFF757DMU.bam GRCh38 released low read depth, mild to moderate bottlenecking ENCFF846CYU bam alignments ENCSR563LLO ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F1-human ENCAB851KCY DNA False 2016-07-08 ENCODE 1 100 ENCFF643CGH, ENCFF749JUG, ENCFF942QFN 2261609064 ENCODE Processing Pipeline 369dc09f70b6be6203675d0abd60b4e8 https://www.encodeproject.org/files/ENCFF846CYU/@@download/ENCFF846CYU.bam GRCh38 released low read depth, mild to moderate bottlenecking ENCFF226KOW bam alignments ENCSR563LLO ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F1-human ENCAB851KCY DNA False 2016-07-08 ENCODE 2 100 ENCFF399CCC, ENCFF643CGH, ENCFF907JIE 3776769820 ENCODE Processing Pipeline f38981bb5b175d676134bdd5b25e90dc https://www.encodeproject.org/files/ENCFF226KOW/@@download/ENCFF226KOW.bam GRCh38 released low read depth, mild to moderate bottlenecking ENCFF190IAP bigWig signal p-value ENCSR563LLO ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F1-human ENCAB851KCY DNA False 2016-07-08 ENCODE 2 ENCFF226KOW, ENCFF227IZS 940442594 ENCODE Processing Pipeline ffd01a82aeaa1f1215d5588e03b00b11 https://www.encodeproject.org/files/ENCFF190IAP/@@download/ENCFF190IAP.bigWig GRCh38 released low read depth, mild to moderate bottlenecking ENCFF897PQF bigWig signal p-value ENCSR563LLO ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F1-human ENCAB851KCY DNA False 2016-07-08 ENCODE 1 ENCFF846CYU, ENCFF910IKB 863065556 ENCODE Processing Pipeline 268e1ba0f0f5567e46608208fae90da2 https://www.encodeproject.org/files/ENCFF897PQF/@@download/ENCFF897PQF.bigWig GRCh38 released low read depth, mild to moderate bottlenecking ENCFF648CHS bigWig signal p-value ENCSR563LLO ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F1-human ENCAB851KCY DNA False 2016-07-08 ENCODE 1, 2 ENCFF226KOW, ENCFF227IZS, ENCFF846CYU, ENCFF910IKB 1783342060 ENCODE Processing Pipeline e73837b8d789e1ea4220c59d89384084 https://www.encodeproject.org/files/ENCFF648CHS/@@download/ENCFF648CHS.bigWig GRCh38 released low read depth, mild to moderate bottlenecking ENCFF021BGJ bigWig fold change over control ENCSR563LLO ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F1-human ENCAB851KCY DNA False 2016-07-08 ENCODE 1 ENCFF846CYU, ENCFF910IKB 877626020 ENCODE Processing Pipeline 907d589bd7e5ec42f9db4cce4fd24294 https://www.encodeproject.org/files/ENCFF021BGJ/@@download/ENCFF021BGJ.bigWig GRCh38 released low read depth, mild to moderate bottlenecking ENCFF325JPO bigWig fold change over control ENCSR563LLO ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F1-human ENCAB851KCY DNA False 2016-07-08 ENCODE 2 ENCFF226KOW, ENCFF227IZS 1062311025 ENCODE Processing Pipeline a5670d63e815c1ce5d73de5b9c77cd82 https://www.encodeproject.org/files/ENCFF325JPO/@@download/ENCFF325JPO.bigWig GRCh38 released low read depth, mild to moderate bottlenecking ENCFF527AMK bigWig fold change over control ENCSR563LLO ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F1-human ENCAB851KCY DNA False 2016-07-08 ENCODE 1, 2 ENCFF226KOW, ENCFF227IZS, ENCFF846CYU, ENCFF910IKB 1855149042 ENCODE Processing Pipeline 1dc12a0fb52529df49e0d487898793f4 https://www.encodeproject.org/files/ENCFF527AMK/@@download/ENCFF527AMK.bigWig GRCh38 released low read depth, mild to moderate bottlenecking ENCFF936ZSM bigBed narrowPeak peaks ENCSR563LLO ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F1-human ENCAB851KCY DNA False 2016-07-08 ENCODE 2 ENCFF546JXV 13266759 ENCODE Processing Pipeline 3ca03886c9fb316df9d693be6c67cf93 https://www.encodeproject.org/files/ENCFF936ZSM/@@download/ENCFF936ZSM.bigBed GRCh38 released low read depth, mild to moderate bottlenecking ENCFF019ZCE bigBed narrowPeak peaks ENCSR563LLO ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F1-human ENCAB851KCY DNA False 2016-07-08 ENCODE 1, 2 ENCFF877WEN 13244862 ENCODE Processing Pipeline 4cee7d7266f223a0594544e5345cef1a https://www.encodeproject.org/files/ENCFF019ZCE/@@download/ENCFF019ZCE.bigBed GRCh38 released low read depth, mild to moderate bottlenecking ENCFF877WEN bed narrowPeak peaks ENCSR563LLO ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F1-human ENCAB851KCY DNA False 2016-07-08 ENCODE 1, 2 ENCFF226KOW, ENCFF227IZS, ENCFF846CYU, ENCFF910IKB 7081904 ENCODE Processing Pipeline 79cb452ece2efdba21a13fd906b578ff https://www.encodeproject.org/files/ENCFF877WEN/@@download/ENCFF877WEN.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking ENCFF546JXV bed narrowPeak peaks ENCSR563LLO ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F1-human ENCAB851KCY DNA False 2016-07-08 ENCODE 2 ENCFF226KOW, ENCFF227IZS 6392247 ENCODE Processing Pipeline 5e0fc25c3914668186f0e14aae7b1980 https://www.encodeproject.org/files/ENCFF546JXV/@@download/ENCFF546JXV.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking ENCFF611GWJ bigBed narrowPeak conservative idr thresholded peaks ENCSR563LLO ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F1-human ENCAB851KCY DNA False 2016-07-08 ENCODE 1, 2 ENCFF634VUQ 311702 ENCODE Processing Pipeline 4f8755cc6258d287faa9c140eafa2bfd https://www.encodeproject.org/files/ENCFF611GWJ/@@download/ENCFF611GWJ.bigBed GRCh38 released low read depth, mild to moderate bottlenecking ENCFF239VPV bigBed narrowPeak optimal idr thresholded peaks ENCSR563LLO ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F1-human ENCAB851KCY DNA False 2016-07-08 ENCODE 1, 2 ENCFF445VTT 424862 ENCODE Processing Pipeline 36fc1aa3cf96c74749326f999c76cc3b https://www.encodeproject.org/files/ENCFF239VPV/@@download/ENCFF239VPV.bigBed GRCh38 released low read depth, mild to moderate bottlenecking ENCFF711DYD bed narrowPeak peaks ENCSR563LLO ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F1-human ENCAB851KCY DNA False 2016-07-08 ENCODE 1 ENCFF846CYU, ENCFF910IKB 6031283 ENCODE Processing Pipeline 7d351d15f9ba1b236be1800fda572f58 https://www.encodeproject.org/files/ENCFF711DYD/@@download/ENCFF711DYD.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking ENCFF562BVE bigBed narrowPeak peaks ENCSR563LLO ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F1-human ENCAB851KCY DNA False 2016-07-08 ENCODE 1 ENCFF711DYD 13365133 ENCODE Processing Pipeline 045f4a2691dbb85d70660a650cbd553a https://www.encodeproject.org/files/ENCFF562BVE/@@download/ENCFF562BVE.bigBed GRCh38 released low read depth, mild to moderate bottlenecking ENCFF634VUQ bed narrowPeak conservative idr thresholded peaks ENCSR563LLO ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F1-human ENCAB851KCY DNA False 2016-07-08 ENCODE 1, 2 ENCFF419RSJ, ENCFF546JXV, ENCFF711DYD, ENCFF877WEN 140035 ENCODE Processing Pipeline 266db749f52bbe13e5747d9affba5f00 https://www.encodeproject.org/files/ENCFF634VUQ/@@download/ENCFF634VUQ.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking ENCFF445VTT bed narrowPeak optimal idr thresholded peaks ENCSR563LLO ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F1-human ENCAB851KCY DNA False 2016-07-08 ENCODE 1, 2 ENCFF419RSJ, ENCFF546JXV, ENCFF711DYD, ENCFF877WEN 167855 ENCODE Processing Pipeline b3a7a5144a292cafe35edcd2c7e0439d https://www.encodeproject.org/files/ENCFF445VTT/@@download/ENCFF445VTT.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking ENCFF150NGG bam unfiltered alignments ENCSR563LLO ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F1-human ENCAB851KCY DNA False 2016-07-08 ENCODE 1 100 ENCFF749JUG, ENCFF807MUK, ENCFF942QFN 3051878053 ENCODE Processing Pipeline 732cd72bbea0b543e767f2d78abac21e https://www.encodeproject.org/files/ENCFF150NGG/@@download/ENCFF150NGG.bam hg19 released low read depth, mild to moderate bottlenecking ENCFF552TIG bam unfiltered alignments ENCSR563LLO ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F1-human ENCAB851KCY DNA False 2016-07-08 ENCODE 2 100 ENCFF399CCC, ENCFF807MUK, ENCFF907JIE 4936563051 ENCODE Processing Pipeline a66dd58d216b2c89b53deae3d7a5f007 https://www.encodeproject.org/files/ENCFF552TIG/@@download/ENCFF552TIG.bam hg19 released low read depth, mild to moderate bottlenecking ENCFF171BWZ bigBed narrowPeak conservative idr thresholded peaks ENCSR563LLO ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F1-human ENCAB851KCY DNA False 2016-07-08 ENCODE 1, 2 ENCFF414ZZX 281127 ENCODE Processing Pipeline ed8229889685c5fb6b9a62d37d411d67 https://www.encodeproject.org/files/ENCFF171BWZ/@@download/ENCFF171BWZ.bigBed hg19 released low read depth, mild to moderate bottlenecking ENCFF414ZZX bed narrowPeak conservative idr thresholded peaks ENCSR563LLO ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F1-human ENCAB851KCY DNA False 2016-07-08 ENCODE 1, 2 ENCFF001TDO, ENCFF159RHZ, ENCFF218RJK, ENCFF710KKZ 118286 ENCODE Processing Pipeline 321d5c28d1817a7bd38eee7a1389ba70 https://www.encodeproject.org/files/ENCFF414ZZX/@@download/ENCFF414ZZX.bed.gz hg19 released low read depth, mild to moderate bottlenecking ENCFF998YJY bed narrowPeak optimal idr thresholded peaks ENCSR563LLO ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F1-human ENCAB851KCY DNA False 2016-07-08 ENCODE 1, 2 ENCFF001TDO, ENCFF159RHZ, ENCFF218RJK, ENCFF710KKZ 145663 ENCODE Processing Pipeline 167456f68af8d185c73af8324361f14e https://www.encodeproject.org/files/ENCFF998YJY/@@download/ENCFF998YJY.bed.gz hg19 released low read depth, mild to moderate bottlenecking ENCFF318DWQ bigBed narrowPeak optimal idr thresholded peaks ENCSR563LLO ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F1-human ENCAB851KCY DNA False 2016-07-08 ENCODE 1, 2 ENCFF998YJY 318976 ENCODE Processing Pipeline 9faba44363727dd296833623c313d693 https://www.encodeproject.org/files/ENCFF318DWQ/@@download/ENCFF318DWQ.bigBed hg19 released low read depth, mild to moderate bottlenecking ENCFF008APY fastq reads ENCSR154EIH ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIP13-human ENCAB442DTV DNA False 2018-01-26 ENCODE 1 1 100 paired-ended 2 ENCFF451CTA 1913155238 Michael Snyder, Stanford ebaa38d6c60dadb2668f061516dcd7ca https://www.encodeproject.org/files/ENCFF008APY/@@download/ENCFF008APY.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFH/ released borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF050QIO fastq reads ENCSR154EIH ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIP13-human ENCAB442DTV DNA False 2018-01-26 ENCODE 2 1 100 paired-ended 2 ENCFF387SYY 2983620042 Michael Snyder, Stanford b825bfcc4825e6fd47a15fd74b34c6f7 https://www.encodeproject.org/files/ENCFF050QIO/@@download/ENCFF050QIO.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFA/ released borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF451CTA fastq reads ENCSR154EIH ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIP13-human ENCAB442DTV DNA False 2018-01-26 ENCODE 1 1 100 paired-ended 1 ENCFF008APY 1852583799 Michael Snyder, Stanford 207c155b2c4716e9dc94e0a539b93572 https://www.encodeproject.org/files/ENCFF451CTA/@@download/ENCFF451CTA.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFF/ released borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF387SYY fastq reads ENCSR154EIH ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIP13-human ENCAB442DTV DNA False 2018-01-26 ENCODE 2 1 100 paired-ended 1 ENCFF050QIO 2907575072 Michael Snyder, Stanford 0a69631519478f0d8b529d266f6df25a https://www.encodeproject.org/files/ENCFF387SYY/@@download/ENCFF387SYY.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFD/ released borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF744NMO bam unfiltered alignments ENCSR154EIH ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIP13-human ENCAB442DTV DNA False 2018-01-26 ENCODE 1 100 ENCFF008APY, ENCFF451CTA, ENCFF807MUK 4006273538 ENCODE Processing Pipeline 9b1d2103caa78df6efa04c55d988ab80 https://www.encodeproject.org/files/ENCFF744NMO/@@download/ENCFF744NMO.bam hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF619ONV bam alignments ENCSR154EIH ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIP13-human ENCAB442DTV DNA False 2018-01-26 ENCODE 1 100 ENCFF008APY, ENCFF451CTA, ENCFF807MUK 2678396970 ENCODE Processing Pipeline cc1e1c7947086387474d97dad383b483 https://www.encodeproject.org/files/ENCFF619ONV/@@download/ENCFF619ONV.bam hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF085XSB bam unfiltered alignments ENCSR154EIH ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIP13-human ENCAB442DTV DNA False 2018-01-26 ENCODE 1 100 ENCFF008APY, ENCFF451CTA, ENCFF643CGH 4008486120 ENCODE Processing Pipeline 1453f17264b4306fad7e149c903290a7 https://www.encodeproject.org/files/ENCFF085XSB/@@download/ENCFF085XSB.bam GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF708BKX bam unfiltered alignments ENCSR154EIH ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIP13-human ENCAB442DTV DNA False 2018-01-26 ENCODE 2 100 ENCFF050QIO, ENCFF387SYY, ENCFF807MUK 6362699301 ENCODE Processing Pipeline 0bb6c9102b63d7e5980318ee33f7364b https://www.encodeproject.org/files/ENCFF708BKX/@@download/ENCFF708BKX.bam hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF923ISY bam alignments ENCSR154EIH ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIP13-human ENCAB442DTV DNA False 2018-01-26 ENCODE 1 100 ENCFF008APY, ENCFF451CTA, ENCFF643CGH 2679360550 ENCODE Processing Pipeline e16918baf1704eb423114ef306f8fd48 https://www.encodeproject.org/files/ENCFF923ISY/@@download/ENCFF923ISY.bam GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF563NRA bam unfiltered alignments ENCSR154EIH ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIP13-human ENCAB442DTV DNA False 2018-01-26 ENCODE 2 100 ENCFF050QIO, ENCFF387SYY, ENCFF643CGH 6369578976 ENCODE Processing Pipeline 1110376402d91a256f0bca9c5b37fbd4 https://www.encodeproject.org/files/ENCFF563NRA/@@download/ENCFF563NRA.bam GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF942SZJ bam alignments ENCSR154EIH ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIP13-human ENCAB442DTV DNA False 2018-01-26 ENCODE 2 100 ENCFF050QIO, ENCFF387SYY, ENCFF643CGH 4997082449 ENCODE Processing Pipeline 31d5107c9f7b9361cc3adba7b698e3e6 https://www.encodeproject.org/files/ENCFF942SZJ/@@download/ENCFF942SZJ.bam GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF364FHT bam alignments ENCSR154EIH ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIP13-human ENCAB442DTV DNA False 2018-01-26 ENCODE 2 100 ENCFF050QIO, ENCFF387SYY, ENCFF807MUK 4993198514 ENCODE Processing Pipeline e582b1f8e8c03fa4c92e6fad2abf4b4e https://www.encodeproject.org/files/ENCFF364FHT/@@download/ENCFF364FHT.bam hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF724XKA bigWig signal p-value ENCSR154EIH ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIP13-human ENCAB442DTV DNA False 2018-01-26 ENCODE 1 ENCFF910IKB, ENCFF923ISY 999384866 ENCODE Processing Pipeline f7d087fa531d767443d619e8144e1826 https://www.encodeproject.org/files/ENCFF724XKA/@@download/ENCFF724XKA.bigWig GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF241VOM bigWig fold change over control ENCSR154EIH ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIP13-human ENCAB442DTV DNA False 2018-01-26 ENCODE 1 ENCFF910IKB, ENCFF923ISY 909746801 ENCODE Processing Pipeline 373bebff41f6c636fe42fb468e1b611a https://www.encodeproject.org/files/ENCFF241VOM/@@download/ENCFF241VOM.bigWig GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF755JXW bigWig signal p-value ENCSR154EIH ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIP13-human ENCAB442DTV DNA False 2018-01-26 ENCODE 2 ENCFF227IZS, ENCFF942SZJ 997339810 ENCODE Processing Pipeline 13718b473fdc1a524495a8e8bf5d4e09 https://www.encodeproject.org/files/ENCFF755JXW/@@download/ENCFF755JXW.bigWig GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF584AZM bigWig signal p-value ENCSR154EIH ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIP13-human ENCAB442DTV DNA False 2018-01-26 ENCODE 1, 2 ENCFF227IZS, ENCFF910IKB, ENCFF923ISY, ENCFF942SZJ 1953248041 ENCODE Processing Pipeline da4eb81d2f3b01f9ca864ea8eaf4a8da https://www.encodeproject.org/files/ENCFF584AZM/@@download/ENCFF584AZM.bigWig GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF765QSG bigWig fold change over control ENCSR154EIH ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIP13-human ENCAB442DTV DNA False 2018-01-26 ENCODE 2 ENCFF227IZS, ENCFF942SZJ 1253458531 ENCODE Processing Pipeline fc8caf50733b34069b9e3aa0f3db41ed https://www.encodeproject.org/files/ENCFF765QSG/@@download/ENCFF765QSG.bigWig GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF782QHB bigWig fold change over control ENCSR154EIH ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIP13-human ENCAB442DTV DNA False 2018-01-26 ENCODE 1, 2 ENCFF227IZS, ENCFF910IKB, ENCFF923ISY, ENCFF942SZJ 2051438493 ENCODE Processing Pipeline a1250c6c8347d553830051aac3b4c395 https://www.encodeproject.org/files/ENCFF782QHB/@@download/ENCFF782QHB.bigWig GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF341RTC bed narrowPeak peaks ENCSR154EIH ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIP13-human ENCAB442DTV DNA False 2018-01-26 ENCODE 1 ENCFF910IKB, ENCFF923ISY 5995169 ENCODE Processing Pipeline 357f7b2b14dec31302489623f7df954b https://www.encodeproject.org/files/ENCFF341RTC/@@download/ENCFF341RTC.bed.gz GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF221WGZ bed narrowPeak peaks ENCSR154EIH ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIP13-human ENCAB442DTV DNA False 2018-01-26 ENCODE 2 ENCFF227IZS, ENCFF942SZJ 6435923 ENCODE Processing Pipeline aef9c926f6355abf715d77be0b78a2dc https://www.encodeproject.org/files/ENCFF221WGZ/@@download/ENCFF221WGZ.bed.gz GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF995YCS bed narrowPeak peaks ENCSR154EIH ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIP13-human ENCAB442DTV DNA False 2018-01-26 ENCODE 1, 2 ENCFF227IZS, ENCFF910IKB, ENCFF923ISY, ENCFF942SZJ 7099685 ENCODE Processing Pipeline 66acd538a92ced33dd72e286a03a1d64 https://www.encodeproject.org/files/ENCFF995YCS/@@download/ENCFF995YCS.bed.gz GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF661SFR bigBed narrowPeak peaks ENCSR154EIH ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIP13-human ENCAB442DTV DNA False 2018-01-26 ENCODE 1 ENCFF341RTC 11133901 ENCODE Processing Pipeline 900e6017a6b0286c58bc063af1de7e4a https://www.encodeproject.org/files/ENCFF661SFR/@@download/ENCFF661SFR.bigBed GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF026WXT bigBed narrowPeak peaks ENCSR154EIH ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIP13-human ENCAB442DTV DNA False 2018-01-26 ENCODE 2 ENCFF221WGZ 11146152 ENCODE Processing Pipeline b45edf42b72a3d89482659ffb83ce56d https://www.encodeproject.org/files/ENCFF026WXT/@@download/ENCFF026WXT.bigBed GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF099ERA bigBed narrowPeak peaks ENCSR154EIH ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIP13-human ENCAB442DTV DNA False 2018-01-26 ENCODE 1, 2 ENCFF995YCS 13218643 ENCODE Processing Pipeline eb4f6607309ae9c79182e58558521d83 https://www.encodeproject.org/files/ENCFF099ERA/@@download/ENCFF099ERA.bigBed GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF159GUY bed narrowPeak conservative idr thresholded peaks ENCSR154EIH ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIP13-human ENCAB442DTV DNA False 2018-01-26 ENCODE 1, 2 ENCFF221WGZ, ENCFF341RTC, ENCFF419RSJ, ENCFF995YCS 20147 ENCODE Processing Pipeline 36f5247ae68a5ad3b5fb7ffa7fc2f795 https://www.encodeproject.org/files/ENCFF159GUY/@@download/ENCFF159GUY.bed.gz GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF490TZV bigBed narrowPeak conservative idr thresholded peaks ENCSR154EIH ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIP13-human ENCAB442DTV DNA False 2018-01-26 ENCODE 1, 2 ENCFF159GUY 88800 ENCODE Processing Pipeline 37683c2bb2e19492989dafd30f0f7e53 https://www.encodeproject.org/files/ENCFF490TZV/@@download/ENCFF490TZV.bigBed GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF534VQL bed narrowPeak optimal idr thresholded peaks ENCSR154EIH ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIP13-human ENCAB442DTV DNA False 2018-01-26 ENCODE 1, 2 ENCFF221WGZ, ENCFF341RTC, ENCFF419RSJ, ENCFF995YCS 49363 ENCODE Processing Pipeline 5466c64f400b515e7e0c9105e7398f17 https://www.encodeproject.org/files/ENCFF534VQL/@@download/ENCFF534VQL.bed.gz GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF795RXF bigBed narrowPeak optimal idr thresholded peaks ENCSR154EIH ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIP13-human ENCAB442DTV DNA False 2018-01-26 ENCODE 1, 2 ENCFF534VQL 133446 ENCODE Processing Pipeline 75426d091f223a52dd5b8632fabb73cd https://www.encodeproject.org/files/ENCFF795RXF/@@download/ENCFF795RXF.bigBed GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF016RAU bigWig fold change over control ENCSR154EIH ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIP13-human ENCAB442DTV DNA False 2018-01-26 ENCODE 1 ENCFF581ZJL, ENCFF619ONV 910412868 ENCODE Processing Pipeline 617527b15ab978dfbb3a3788ea5be6ae https://www.encodeproject.org/files/ENCFF016RAU/@@download/ENCFF016RAU.bigWig hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF372LVB bed narrowPeak peaks ENCSR154EIH ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIP13-human ENCAB442DTV DNA False 2018-01-26 ENCODE 1 ENCFF581ZJL, ENCFF619ONV 5996883 ENCODE Processing Pipeline 8fb7495ff05c9be22573c84ca5d99b42 https://www.encodeproject.org/files/ENCFF372LVB/@@download/ENCFF372LVB.bed.gz hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF807MSO bigBed narrowPeak peaks ENCSR154EIH ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIP13-human ENCAB442DTV DNA False 2018-01-26 ENCODE 1 ENCFF372LVB 11127794 ENCODE Processing Pipeline 6da98bf476cd5498666f90939542926b https://www.encodeproject.org/files/ENCFF807MSO/@@download/ENCFF807MSO.bigBed hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF561IZB bed narrowPeak optimal idr thresholded peaks ENCSR154EIH ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIP13-human ENCAB442DTV DNA False 2018-01-26 ENCODE 1, 2 ENCFF001TDO, ENCFF372LVB, ENCFF733BCO, ENCFF971BFZ 49333 ENCODE Processing Pipeline f2c0a575184e1392df356ca4a32d0f8f https://www.encodeproject.org/files/ENCFF561IZB/@@download/ENCFF561IZB.bed.gz hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF060VWY bigBed narrowPeak optimal idr thresholded peaks ENCSR154EIH ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIP13-human ENCAB442DTV DNA False 2018-01-26 ENCODE 1, 2 ENCFF561IZB 131846 ENCODE Processing Pipeline 49d87dcf8e4dfd5ab137d93ae4b8f0ec https://www.encodeproject.org/files/ENCFF060VWY/@@download/ENCFF060VWY.bigBed hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF255CMY bigWig signal p-value ENCSR154EIH ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIP13-human ENCAB442DTV DNA False 2018-01-26 ENCODE 1 ENCFF581ZJL, ENCFF619ONV 887421621 ENCODE Processing Pipeline c1e9e1255aeab85861b56cea806f03c5 https://www.encodeproject.org/files/ENCFF255CMY/@@download/ENCFF255CMY.bigWig hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF733BCO bed narrowPeak peaks ENCSR154EIH ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIP13-human ENCAB442DTV DNA False 2018-01-26 ENCODE 2 ENCFF051LWI, ENCFF364FHT 6433432 ENCODE Processing Pipeline df054e85b6b3638edd1c38698fa4235c https://www.encodeproject.org/files/ENCFF733BCO/@@download/ENCFF733BCO.bed.gz hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF971BFZ bed narrowPeak peaks ENCSR154EIH ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIP13-human ENCAB442DTV DNA False 2018-01-26 ENCODE 1, 2 ENCFF051LWI, ENCFF364FHT, ENCFF581ZJL, ENCFF619ONV 7099199 ENCODE Processing Pipeline 0ea44abf1b4e5b091b6f8aaa98ea9e76 https://www.encodeproject.org/files/ENCFF971BFZ/@@download/ENCFF971BFZ.bed.gz hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF360VBZ bed narrowPeak conservative idr thresholded peaks ENCSR154EIH ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIP13-human ENCAB442DTV DNA False 2018-01-26 ENCODE 1, 2 ENCFF001TDO, ENCFF372LVB, ENCFF733BCO, ENCFF971BFZ 19671 ENCODE Processing Pipeline 3dbb5c32d57a10387e10882b42d7969a https://www.encodeproject.org/files/ENCFF360VBZ/@@download/ENCFF360VBZ.bed.gz hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF593SCQ bigWig signal p-value ENCSR154EIH ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIP13-human ENCAB442DTV DNA False 2018-01-26 ENCODE 2 ENCFF051LWI, ENCFF364FHT 1251584460 ENCODE Processing Pipeline 856b4f94e28d73ac070cfd5664c7f2e4 https://www.encodeproject.org/files/ENCFF593SCQ/@@download/ENCFF593SCQ.bigWig hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF317QLL bigWig fold change over control ENCSR154EIH ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIP13-human ENCAB442DTV DNA False 2018-01-26 ENCODE 1, 2 ENCFF051LWI, ENCFF364FHT, ENCFF581ZJL, ENCFF619ONV 2045796640 ENCODE Processing Pipeline 3a87f7265d53143a4f654e505ab87383 https://www.encodeproject.org/files/ENCFF317QLL/@@download/ENCFF317QLL.bigWig hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF052UYV bigWig signal p-value ENCSR154EIH ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIP13-human ENCAB442DTV DNA False 2018-01-26 ENCODE 1, 2 ENCFF051LWI, ENCFF364FHT, ENCFF581ZJL, ENCFF619ONV 2036628089 ENCODE Processing Pipeline 14b5f6b5162e0565f114bce2fbd2252a https://www.encodeproject.org/files/ENCFF052UYV/@@download/ENCFF052UYV.bigWig hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF717SCD bigBed narrowPeak peaks ENCSR154EIH ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIP13-human ENCAB442DTV DNA False 2018-01-26 ENCODE 1, 2 ENCFF971BFZ 13200765 ENCODE Processing Pipeline 2a43f214e92bb3bcdb4403d83c7fcb9e https://www.encodeproject.org/files/ENCFF717SCD/@@download/ENCFF717SCD.bigBed hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF642DME bigWig fold change over control ENCSR154EIH ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIP13-human ENCAB442DTV DNA False 2018-01-26 ENCODE 2 ENCFF051LWI, ENCFF364FHT 1227469912 ENCODE Processing Pipeline dcb5b0f13922960a067a852888eb05bb https://www.encodeproject.org/files/ENCFF642DME/@@download/ENCFF642DME.bigWig hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF442KSW bigBed narrowPeak peaks ENCSR154EIH ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIP13-human ENCAB442DTV DNA False 2018-01-26 ENCODE 2 ENCFF733BCO 11124290 ENCODE Processing Pipeline e8b25979831345eac5a26632136c7dcf https://www.encodeproject.org/files/ENCFF442KSW/@@download/ENCFF442KSW.bigBed hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF142YMQ bigBed narrowPeak conservative idr thresholded peaks ENCSR154EIH ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIP13-human ENCAB442DTV DNA False 2018-01-26 ENCODE 1, 2 ENCFF360VBZ 87158 ENCODE Processing Pipeline e4f7fa023831fc67477d6148fdadfd31 https://www.encodeproject.org/files/ENCFF142YMQ/@@download/ENCFF142YMQ.bigBed hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF005XAH bam unfiltered alignments ENCSR546IHU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF184-human ENCAB466YMY DNA False 2017-07-28 ENCODE 1 100 ENCFF264CHQ, ENCFF807MUK, ENCFF880UNP 7114336514 ENCODE Processing Pipeline f1ef76d65deb5480c030efcfcdb88b3a https://www.encodeproject.org/files/ENCFF005XAH/@@download/ENCFF005XAH.bam hg19 released ENCFF137RKF bam unfiltered alignments ENCSR546IHU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF184-human ENCAB466YMY DNA False 2017-07-28 ENCODE 2 100 ENCFF082KHS, ENCFF118URY, ENCFF807MUK 6499825882 ENCODE Processing Pipeline fe5b2aa7995b74f51bf731f665a341a2 https://www.encodeproject.org/files/ENCFF137RKF/@@download/ENCFF137RKF.bam hg19 released ENCFF264CHQ fastq reads ENCSR546IHU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF184-human ENCAB466YMY DNA False 2017-07-28 ENCODE 1 1 100 paired-ended 2 ENCFF880UNP 3324062043 Michael Snyder, Stanford 1edb47c5c5d27ab6274c4d6e1b820281 SRA:SRR6213651 https://www.encodeproject.org/files/ENCFF264CHQ/@@download/ENCFF264CHQ.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFH/ released ENCFF118URY fastq reads ENCSR546IHU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF184-human ENCAB466YMY DNA False 2017-07-28 ENCODE 2 1 100 paired-ended 1 ENCFF082KHS 2974667236 Michael Snyder, Stanford a896740629f70c16a3f61f3132c78a0f SRA:SRR6213652 https://www.encodeproject.org/files/ENCFF118URY/@@download/ENCFF118URY.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFD/ released ENCFF082KHS fastq reads ENCSR546IHU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF184-human ENCAB466YMY DNA False 2017-07-28 ENCODE 2 1 100 paired-ended 2 ENCFF118URY 3036554916 Michael Snyder, Stanford 03d859a15078976ef843d499d8e9b874 SRA:SRR6213652 https://www.encodeproject.org/files/ENCFF082KHS/@@download/ENCFF082KHS.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFA/ released ENCFF880UNP fastq reads ENCSR546IHU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF184-human ENCAB466YMY DNA False 2017-07-28 ENCODE 1 1 100 paired-ended 1 ENCFF264CHQ 3258595373 Michael Snyder, Stanford d73336e473cddc87d7485cffb4ab3005 SRA:SRR6213651 https://www.encodeproject.org/files/ENCFF880UNP/@@download/ENCFF880UNP.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFF/ released ENCFF430WVD bam alignments ENCSR546IHU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF184-human ENCAB466YMY DNA False 2017-07-28 ENCODE 1 100 ENCFF264CHQ, ENCFF807MUK, ENCFF880UNP 5425510416 ENCODE Processing Pipeline 4502420105934849598fa3ff22fd1cac https://www.encodeproject.org/files/ENCFF430WVD/@@download/ENCFF430WVD.bam hg19 released ENCFF544MAP bam alignments ENCSR546IHU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF184-human ENCAB466YMY DNA False 2017-07-28 ENCODE 2 100 ENCFF082KHS, ENCFF118URY, ENCFF807MUK 4889208053 ENCODE Processing Pipeline 01a244d31b828f3d10188e2018ec397e https://www.encodeproject.org/files/ENCFF544MAP/@@download/ENCFF544MAP.bam hg19 released ENCFF029UDB bigWig signal p-value ENCSR546IHU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF184-human ENCAB466YMY DNA False 2017-07-28 ENCODE 1 ENCFF430WVD, ENCFF581ZJL 1334012419 ENCODE Processing Pipeline 5180a28449940312761cd72632883151 https://www.encodeproject.org/files/ENCFF029UDB/@@download/ENCFF029UDB.bigWig hg19 released ENCFF197SIU bigWig signal p-value ENCSR546IHU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF184-human ENCAB466YMY DNA False 2017-07-28 ENCODE 2 ENCFF051LWI, ENCFF544MAP 1120568755 ENCODE Processing Pipeline 21bec94a209aafd291d306a63fca2c8f https://www.encodeproject.org/files/ENCFF197SIU/@@download/ENCFF197SIU.bigWig hg19 released ENCFF963ROF bigWig signal p-value ENCSR546IHU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF184-human ENCAB466YMY DNA False 2017-07-28 ENCODE 1, 2 ENCFF051LWI, ENCFF430WVD, ENCFF544MAP, ENCFF581ZJL 2069574960 ENCODE Processing Pipeline e530ef6b913f6714f109990b9013ab37 https://www.encodeproject.org/files/ENCFF963ROF/@@download/ENCFF963ROF.bigWig hg19 released ENCFF023RUI bigWig fold change over control ENCSR546IHU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF184-human ENCAB466YMY DNA False 2017-07-28 ENCODE 1 ENCFF430WVD, ENCFF581ZJL 1301405254 ENCODE Processing Pipeline be2a41854d85fb984fc26cb6ff60d9b0 https://www.encodeproject.org/files/ENCFF023RUI/@@download/ENCFF023RUI.bigWig hg19 released ENCFF527TZQ bigWig fold change over control ENCSR546IHU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF184-human ENCAB466YMY DNA False 2017-07-28 ENCODE 2 ENCFF051LWI, ENCFF544MAP 1208100338 ENCODE Processing Pipeline 9264a065ed3fd794dfb873dfdef35c12 https://www.encodeproject.org/files/ENCFF527TZQ/@@download/ENCFF527TZQ.bigWig hg19 released ENCFF452SVJ bigWig fold change over control ENCSR546IHU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF184-human ENCAB466YMY DNA False 2017-07-28 ENCODE 1, 2 ENCFF051LWI, ENCFF430WVD, ENCFF544MAP, ENCFF581ZJL 2200209081 ENCODE Processing Pipeline ba8ba845829967d3669a0dfa82dc9bc0 https://www.encodeproject.org/files/ENCFF452SVJ/@@download/ENCFF452SVJ.bigWig hg19 released ENCFF121MTK bed narrowPeak peaks ENCSR546IHU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF184-human ENCAB466YMY DNA False 2017-07-28 ENCODE 1 ENCFF430WVD, ENCFF581ZJL 6704094 ENCODE Processing Pipeline 20566f46bdabc2b040fa2bb4ccdc8a32 https://www.encodeproject.org/files/ENCFF121MTK/@@download/ENCFF121MTK.bed.gz hg19 released ENCFF580OVF bed narrowPeak peaks ENCSR546IHU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF184-human ENCAB466YMY DNA False 2017-07-28 ENCODE 2 ENCFF051LWI, ENCFF544MAP 6894292 ENCODE Processing Pipeline 552f2bab6068ab3d0513b6720c1669de https://www.encodeproject.org/files/ENCFF580OVF/@@download/ENCFF580OVF.bed.gz hg19 released ENCFF722GTZ bed narrowPeak peaks ENCSR546IHU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF184-human ENCAB466YMY DNA False 2017-07-28 ENCODE 1, 2 ENCFF051LWI, ENCFF430WVD, ENCFF544MAP, ENCFF581ZJL 7262910 ENCODE Processing Pipeline 80de46980f3e670effa4b260d025e0e8 https://www.encodeproject.org/files/ENCFF722GTZ/@@download/ENCFF722GTZ.bed.gz hg19 released ENCFF769ISQ bigBed narrowPeak peaks ENCSR546IHU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF184-human ENCAB466YMY DNA False 2017-07-28 ENCODE 1 ENCFF121MTK 11183264 ENCODE Processing Pipeline e94da769c066729e1a788b0bc873e17f https://www.encodeproject.org/files/ENCFF769ISQ/@@download/ENCFF769ISQ.bigBed hg19 released ENCFF296TKA bigBed narrowPeak peaks ENCSR546IHU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF184-human ENCAB466YMY DNA False 2017-07-28 ENCODE 2 ENCFF580OVF 13258126 ENCODE Processing Pipeline 70e7b0cb4d475fa73e686c754a5fe204 https://www.encodeproject.org/files/ENCFF296TKA/@@download/ENCFF296TKA.bigBed hg19 released ENCFF181MLR bigBed narrowPeak peaks ENCSR546IHU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF184-human ENCAB466YMY DNA False 2017-07-28 ENCODE 1, 2 ENCFF722GTZ 13207770 ENCODE Processing Pipeline 3ffe68c7961e9575559f935f34c6f4b3 https://www.encodeproject.org/files/ENCFF181MLR/@@download/ENCFF181MLR.bigBed hg19 released ENCFF556YCY bed narrowPeak optimal idr thresholded peaks ENCSR546IHU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF184-human ENCAB466YMY DNA False 2017-07-28 ENCODE 1, 2 ENCFF001TDO, ENCFF121MTK, ENCFF580OVF, ENCFF722GTZ 197431 ENCODE Processing Pipeline 3f96e4acd4c424097caf1ee9eceedf8a https://www.encodeproject.org/files/ENCFF556YCY/@@download/ENCFF556YCY.bed.gz hg19 released ENCFF951UWN bed narrowPeak conservative idr thresholded peaks ENCSR546IHU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF184-human ENCAB466YMY DNA False 2017-07-28 ENCODE 1, 2 ENCFF001TDO, ENCFF121MTK, ENCFF580OVF, ENCFF722GTZ 106219 ENCODE Processing Pipeline 3ece9b16f614b0481a9b8e178780ce71 https://www.encodeproject.org/files/ENCFF951UWN/@@download/ENCFF951UWN.bed.gz hg19 released ENCFF506SJF bigBed narrowPeak conservative idr thresholded peaks ENCSR546IHU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF184-human ENCAB466YMY DNA False 2017-07-28 ENCODE 1, 2 ENCFF951UWN 263925 ENCODE Processing Pipeline 5669c5556ce32014ac83ee7b131a2fde https://www.encodeproject.org/files/ENCFF506SJF/@@download/ENCFF506SJF.bigBed hg19 released ENCFF691DCT bigBed narrowPeak optimal idr thresholded peaks ENCSR546IHU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF184-human ENCAB466YMY DNA False 2017-07-28 ENCODE 1, 2 ENCFF556YCY 397486 ENCODE Processing Pipeline a2e751d131c086e4fdb50d4e351d28bf https://www.encodeproject.org/files/ENCFF691DCT/@@download/ENCFF691DCT.bigBed hg19 released ENCFF078FTA bam unfiltered alignments ENCSR546IHU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF184-human ENCAB466YMY DNA False 2017-07-28 ENCODE 2 100 ENCFF082KHS, ENCFF118URY, ENCFF643CGH 6502733564 ENCODE Processing Pipeline 87720b65ee9d4f27ef02dd20054fc340 https://www.encodeproject.org/files/ENCFF078FTA/@@download/ENCFF078FTA.bam GRCh38 released ENCFF354TFR bam unfiltered alignments ENCSR546IHU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF184-human ENCAB466YMY DNA False 2017-07-28 ENCODE 1 100 ENCFF264CHQ, ENCFF643CGH, ENCFF880UNP 7118058157 ENCODE Processing Pipeline 9f1997ea3ecf556c28177e856b51e7cb https://www.encodeproject.org/files/ENCFF354TFR/@@download/ENCFF354TFR.bam GRCh38 released ENCFF648LXV bam alignments ENCSR546IHU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF184-human ENCAB466YMY DNA False 2017-07-28 ENCODE 2 100 ENCFF082KHS, ENCFF118URY, ENCFF643CGH 4893622585 ENCODE Processing Pipeline eacb73bcd2aa6070362be2ead4f81c2d https://www.encodeproject.org/files/ENCFF648LXV/@@download/ENCFF648LXV.bam GRCh38 released ENCFF068UWU bam alignments ENCSR546IHU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF184-human ENCAB466YMY DNA False 2017-07-28 ENCODE 1 100 ENCFF264CHQ, ENCFF643CGH, ENCFF880UNP 5430129177 ENCODE Processing Pipeline 9da1be1452ac42835fb940ee31ab576c https://www.encodeproject.org/files/ENCFF068UWU/@@download/ENCFF068UWU.bam GRCh38 released ENCFF720VHO bigWig signal p-value ENCSR546IHU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF184-human ENCAB466YMY DNA False 2017-07-28 ENCODE 1 ENCFF068UWU, ENCFF910IKB 1237750438 ENCODE Processing Pipeline 7e1593dccee820821ab97befde9a6cdf https://www.encodeproject.org/files/ENCFF720VHO/@@download/ENCFF720VHO.bigWig GRCh38 released ENCFF355UYJ bigWig signal p-value ENCSR546IHU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF184-human ENCAB466YMY DNA False 2017-07-28 ENCODE 2 ENCFF227IZS, ENCFF648LXV 1018793909 ENCODE Processing Pipeline 2815b0943609517d49f2d6bc618559de https://www.encodeproject.org/files/ENCFF355UYJ/@@download/ENCFF355UYJ.bigWig GRCh38 released ENCFF664LTQ bigWig signal p-value ENCSR546IHU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF184-human ENCAB466YMY DNA False 2017-07-28 ENCODE 1, 2 ENCFF068UWU, ENCFF227IZS, ENCFF648LXV, ENCFF910IKB 1825286243 ENCODE Processing Pipeline 399bceb87a2097f2c3839fec704bce25 https://www.encodeproject.org/files/ENCFF664LTQ/@@download/ENCFF664LTQ.bigWig GRCh38 released ENCFF109UPN bigWig fold change over control ENCSR546IHU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF184-human ENCAB466YMY DNA False 2017-07-28 ENCODE 1 ENCFF068UWU, ENCFF910IKB 1307225462 ENCODE Processing Pipeline 7192727928a538436c7a3b662c2a110f https://www.encodeproject.org/files/ENCFF109UPN/@@download/ENCFF109UPN.bigWig GRCh38 released ENCFF362BCJ bigWig fold change over control ENCSR546IHU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF184-human ENCAB466YMY DNA False 2017-07-28 ENCODE 2 ENCFF227IZS, ENCFF648LXV 1207565805 ENCODE Processing Pipeline 044ff95956f05e7b78f9a10e5729e446 https://www.encodeproject.org/files/ENCFF362BCJ/@@download/ENCFF362BCJ.bigWig GRCh38 released ENCFF689NUE bigWig fold change over control ENCSR546IHU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF184-human ENCAB466YMY DNA False 2017-07-28 ENCODE 1, 2 ENCFF068UWU, ENCFF227IZS, ENCFF648LXV, ENCFF910IKB 2167674803 ENCODE Processing Pipeline 8c90721822d1e5086adfb018edcc1f0b https://www.encodeproject.org/files/ENCFF689NUE/@@download/ENCFF689NUE.bigWig GRCh38 released ENCFF961VPB bed narrowPeak peaks ENCSR546IHU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF184-human ENCAB466YMY DNA False 2017-07-28 ENCODE 1 ENCFF068UWU, ENCFF910IKB 6582921 ENCODE Processing Pipeline c24d287652dc27308f2dd7ee5b300dfb https://www.encodeproject.org/files/ENCFF961VPB/@@download/ENCFF961VPB.bed.gz GRCh38 released ENCFF495UHL bed narrowPeak peaks ENCSR546IHU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF184-human ENCAB466YMY DNA False 2017-07-28 ENCODE 2 ENCFF227IZS, ENCFF648LXV 6783819 ENCODE Processing Pipeline d90f4fb65732804a5cacef94bf2ef10c https://www.encodeproject.org/files/ENCFF495UHL/@@download/ENCFF495UHL.bed.gz GRCh38 released ENCFF584NKE bed narrowPeak peaks ENCSR546IHU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF184-human ENCAB466YMY DNA False 2017-07-28 ENCODE 1, 2 ENCFF068UWU, ENCFF227IZS, ENCFF648LXV, ENCFF910IKB 7251454 ENCODE Processing Pipeline 6fc7de8de828f189c7d40069722173d2 https://www.encodeproject.org/files/ENCFF584NKE/@@download/ENCFF584NKE.bed.gz GRCh38 released ENCFF577XCY bigBed narrowPeak peaks ENCSR546IHU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF184-human ENCAB466YMY DNA False 2017-07-28 ENCODE 1 ENCFF961VPB 11193296 ENCODE Processing Pipeline d2998e62701b8883c0be0e7a8aea2983 https://www.encodeproject.org/files/ENCFF577XCY/@@download/ENCFF577XCY.bigBed GRCh38 released ENCFF935MFB bigBed narrowPeak peaks ENCSR546IHU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF184-human ENCAB466YMY DNA False 2017-07-28 ENCODE 2 ENCFF495UHL 13267430 ENCODE Processing Pipeline 70d973ca0f7cf3031690a09c3ea5596d https://www.encodeproject.org/files/ENCFF935MFB/@@download/ENCFF935MFB.bigBed GRCh38 released ENCFF125LRO bigBed narrowPeak peaks ENCSR546IHU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF184-human ENCAB466YMY DNA False 2017-07-28 ENCODE 1, 2 ENCFF584NKE 13220067 ENCODE Processing Pipeline 7c1d587e4509e379c8afd8214949b128 https://www.encodeproject.org/files/ENCFF125LRO/@@download/ENCFF125LRO.bigBed GRCh38 released ENCFF352VEC bed narrowPeak conservative idr thresholded peaks ENCSR546IHU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF184-human ENCAB466YMY DNA False 2017-07-28 ENCODE 1, 2 ENCFF419RSJ, ENCFF495UHL, ENCFF584NKE, ENCFF961VPB 104193 ENCODE Processing Pipeline 31f979a8db200a320b260ab7f6be5f2d https://www.encodeproject.org/files/ENCFF352VEC/@@download/ENCFF352VEC.bed.gz GRCh38 released ENCFF352CBW bigBed narrowPeak conservative idr thresholded peaks ENCSR546IHU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF184-human ENCAB466YMY DNA False 2017-07-28 ENCODE 1, 2 ENCFF352VEC 262451 ENCODE Processing Pipeline c92a9137fd8af83d684953f6ba85f495 https://www.encodeproject.org/files/ENCFF352CBW/@@download/ENCFF352CBW.bigBed GRCh38 released ENCFF855CUN bed narrowPeak optimal idr thresholded peaks ENCSR546IHU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF184-human ENCAB466YMY DNA False 2017-07-28 ENCODE 1, 2 ENCFF419RSJ, ENCFF495UHL, ENCFF584NKE, ENCFF961VPB 196617 ENCODE Processing Pipeline 5cef6db3c700f8b6ba43ef2088639dae https://www.encodeproject.org/files/ENCFF855CUN/@@download/ENCFF855CUN.bed.gz GRCh38 released ENCFF732ESV bigBed narrowPeak optimal idr thresholded peaks ENCSR546IHU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF184-human ENCAB466YMY DNA False 2017-07-28 ENCODE 1, 2 ENCFF855CUN 399091 ENCODE Processing Pipeline 3e7a17c441fc02bb19c87d5ce9cebf95 https://www.encodeproject.org/files/ENCFF732ESV/@@download/ENCFF732ESV.bigBed GRCh38 released ENCFF538ISP bam unfiltered alignments ENCSR731LHZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens E4F1-human ENCAB944PGR DNA False 2018-01-26 ENCODE 2 100 ENCFF243UPQ, ENCFF301GHT, ENCFF807MUK 5166180384 ENCODE Processing Pipeline 350e35fbc3994e71f6357abfd11bb277 https://www.encodeproject.org/files/ENCFF538ISP/@@download/ENCFF538ISP.bam hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO, out of date analysis partially characterized antibody missing control alignments ENCFF620VYW bam unfiltered alignments ENCSR731LHZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens E4F1-human ENCAB944PGR DNA False 2018-01-26 ENCODE 1 100 ENCFF603CIN, ENCFF772FZX, ENCFF807MUK 3790091073 ENCODE Processing Pipeline 3900980329caf909c8daf256faeb7342 https://www.encodeproject.org/files/ENCFF620VYW/@@download/ENCFF620VYW.bam hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO, out of date analysis partially characterized antibody missing control alignments ENCFF301GHT fastq reads ENCSR731LHZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens E4F1-human ENCAB944PGR DNA False 2018-01-26 ENCODE 2 1 100 paired-ended 1 ENCFF243UPQ 2419593962 Michael Snyder, Stanford a265b1343cf0d0c3754abaea42cc1d6b https://www.encodeproject.org/files/ENCFF301GHT/@@download/ENCFF301GHT.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFD/ released low read depth, mild to moderate bottlenecking experiment not submitted to GEO, out of date analysis partially characterized antibody missing control alignments ENCFF603CIN fastq reads ENCSR731LHZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens E4F1-human ENCAB944PGR DNA False 2018-01-26 ENCODE 1 1 100 paired-ended 2 ENCFF772FZX 1760242873 Michael Snyder, Stanford 140f752a344659532c332ddf49d3f186 https://www.encodeproject.org/files/ENCFF603CIN/@@download/ENCFF603CIN.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFH/ released low read depth, mild to moderate bottlenecking experiment not submitted to GEO, out of date analysis partially characterized antibody missing control alignments ENCFF243UPQ fastq reads ENCSR731LHZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens E4F1-human ENCAB944PGR DNA False 2018-01-26 ENCODE 2 1 100 paired-ended 2 ENCFF301GHT 2513376218 Michael Snyder, Stanford 736978b2fcf9e0185960beaceb4fd6b1 https://www.encodeproject.org/files/ENCFF243UPQ/@@download/ENCFF243UPQ.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFA/ released low read depth, mild to moderate bottlenecking experiment not submitted to GEO, out of date analysis partially characterized antibody missing control alignments ENCFF772FZX fastq reads ENCSR731LHZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens E4F1-human ENCAB944PGR DNA False 2018-01-26 ENCODE 1 1 100 paired-ended 1 ENCFF603CIN 1725000343 Michael Snyder, Stanford 1b83a83ab8400ac2abc33c7400677100 https://www.encodeproject.org/files/ENCFF772FZX/@@download/ENCFF772FZX.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFF/ released low read depth, mild to moderate bottlenecking experiment not submitted to GEO, out of date analysis partially characterized antibody missing control alignments ENCFF085VSJ bam alignments ENCSR731LHZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens E4F1-human ENCAB944PGR DNA False 2018-01-26 ENCODE 2 100 ENCFF243UPQ, ENCFF301GHT, ENCFF807MUK 3713415003 ENCODE Processing Pipeline f6ee85d38c5d20cb3b0b8d0d4fbfc43d https://www.encodeproject.org/files/ENCFF085VSJ/@@download/ENCFF085VSJ.bam hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO, out of date analysis partially characterized antibody missing control alignments ENCFF924KFO bam alignments ENCSR731LHZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens E4F1-human ENCAB944PGR DNA False 2018-01-26 ENCODE 1 100 ENCFF603CIN, ENCFF772FZX, ENCFF807MUK 2953462026 ENCODE Processing Pipeline ccfe849e43262a008a8b93e007922262 https://www.encodeproject.org/files/ENCFF924KFO/@@download/ENCFF924KFO.bam hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO, out of date analysis partially characterized antibody missing control alignments ENCFF573MZM bigWig signal p-value ENCSR731LHZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens E4F1-human ENCAB944PGR DNA False 2018-01-26 ENCODE 1 ENCFF581ZJL, ENCFF924KFO 897247748 ENCODE Processing Pipeline 33bbb36c8493079d544dec7e8943b86e https://www.encodeproject.org/files/ENCFF573MZM/@@download/ENCFF573MZM.bigWig hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO, out of date analysis partially characterized antibody missing control alignments ENCFF162DVV bigWig signal p-value ENCSR731LHZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens E4F1-human ENCAB944PGR DNA False 2018-01-26 ENCODE 2 ENCFF051LWI, ENCFF085VSJ 960127349 ENCODE Processing Pipeline 0a010949ed66372366b2b12327c20923 https://www.encodeproject.org/files/ENCFF162DVV/@@download/ENCFF162DVV.bigWig hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO, out of date analysis partially characterized antibody missing control alignments ENCFF937ULX bigWig signal p-value ENCSR731LHZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens E4F1-human ENCAB944PGR DNA False 2018-01-26 ENCODE 1, 2 ENCFF051LWI, ENCFF085VSJ, ENCFF581ZJL, ENCFF924KFO 1670226685 ENCODE Processing Pipeline ecfe1b24a973c6a860714849a4a7f0ef https://www.encodeproject.org/files/ENCFF937ULX/@@download/ENCFF937ULX.bigWig hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO, out of date analysis partially characterized antibody missing control alignments ENCFF045OKJ bigWig fold change over control ENCSR731LHZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens E4F1-human ENCAB944PGR DNA False 2018-01-26 ENCODE 1 ENCFF581ZJL, ENCFF924KFO 927835555 ENCODE Processing Pipeline 6ecd5cdcdd7a838acdb1cff34f416093 https://www.encodeproject.org/files/ENCFF045OKJ/@@download/ENCFF045OKJ.bigWig hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO, out of date analysis partially characterized antibody missing control alignments ENCFF983VCT bigWig fold change over control ENCSR731LHZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens E4F1-human ENCAB944PGR DNA False 2018-01-26 ENCODE 2 ENCFF051LWI, ENCFF085VSJ 1068199736 ENCODE Processing Pipeline 266c85ce7b07dc8c4b72cde58c30a7f4 https://www.encodeproject.org/files/ENCFF983VCT/@@download/ENCFF983VCT.bigWig hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO, out of date analysis partially characterized antibody missing control alignments ENCFF093MRW bigWig fold change over control ENCSR731LHZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens E4F1-human ENCAB944PGR DNA False 2018-01-26 ENCODE 1, 2 ENCFF051LWI, ENCFF085VSJ, ENCFF581ZJL, ENCFF924KFO 1895908915 ENCODE Processing Pipeline e5d3ea5790e3b9b5392910bf3d69ef68 https://www.encodeproject.org/files/ENCFF093MRW/@@download/ENCFF093MRW.bigWig hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO, out of date analysis partially characterized antibody missing control alignments ENCFF713DFK bed narrowPeak peaks ENCSR731LHZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens E4F1-human ENCAB944PGR DNA False 2018-01-26 ENCODE 1 ENCFF581ZJL, ENCFF924KFO 6995781 ENCODE Processing Pipeline 7ac0da1320eb4d89fc2a472ee1b731e8 https://www.encodeproject.org/files/ENCFF713DFK/@@download/ENCFF713DFK.bed.gz hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO, out of date analysis partially characterized antibody missing control alignments ENCFF249GYD bed narrowPeak peaks ENCSR731LHZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens E4F1-human ENCAB944PGR DNA False 2018-01-26 ENCODE 2 ENCFF051LWI, ENCFF085VSJ 6794677 ENCODE Processing Pipeline 399ad20964e01340f9aea8e025cbfd10 https://www.encodeproject.org/files/ENCFF249GYD/@@download/ENCFF249GYD.bed.gz hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO, out of date analysis partially characterized antibody missing control alignments ENCFF971RYI bigBed narrowPeak peaks ENCSR731LHZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens E4F1-human ENCAB944PGR DNA False 2018-01-26 ENCODE 2 ENCFF249GYD 13087070 ENCODE Processing Pipeline 9e72ba6f35f604b4f96c2266aa7c5bf0 https://www.encodeproject.org/files/ENCFF971RYI/@@download/ENCFF971RYI.bigBed hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO, out of date analysis partially characterized antibody missing control alignments ENCFF952KDF bed narrowPeak peaks ENCSR731LHZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens E4F1-human ENCAB944PGR DNA False 2018-01-26 ENCODE 1, 2 ENCFF051LWI, ENCFF085VSJ, ENCFF581ZJL, ENCFF924KFO 7143137 ENCODE Processing Pipeline c36b19d1edcddcc25701ff1cb7c9c709 https://www.encodeproject.org/files/ENCFF952KDF/@@download/ENCFF952KDF.bed.gz hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO, out of date analysis partially characterized antibody missing control alignments ENCFF858NBR bigBed narrowPeak peaks ENCSR731LHZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens E4F1-human ENCAB944PGR DNA False 2018-01-26 ENCODE 1, 2 ENCFF952KDF 12680088 ENCODE Processing Pipeline da85c7c4fc26a149fee69a819d70da8a https://www.encodeproject.org/files/ENCFF858NBR/@@download/ENCFF858NBR.bigBed hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO, out of date analysis partially characterized antibody missing control alignments ENCFF012ARZ bigBed narrowPeak peaks ENCSR731LHZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens E4F1-human ENCAB944PGR DNA False 2018-01-26 ENCODE 1 ENCFF713DFK 12782276 ENCODE Processing Pipeline 44f2008b0c3ba656b25e7faf38c66b80 https://www.encodeproject.org/files/ENCFF012ARZ/@@download/ENCFF012ARZ.bigBed hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO, out of date analysis partially characterized antibody missing control alignments ENCFF609YEW bam unfiltered alignments ENCSR731LHZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens E4F1-human ENCAB944PGR DNA False 2018-01-26 ENCODE 1 100 ENCFF603CIN, ENCFF643CGH, ENCFF772FZX 3792015147 ENCODE Processing Pipeline 93f75b86e3c45ca639dce515caa3a04c https://www.encodeproject.org/files/ENCFF609YEW/@@download/ENCFF609YEW.bam GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO, out of date analysis partially characterized antibody missing control alignments ENCFF814RLQ bam unfiltered alignments ENCSR731LHZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens E4F1-human ENCAB944PGR DNA False 2018-01-26 ENCODE 2 100 ENCFF243UPQ, ENCFF301GHT, ENCFF643CGH 5169138879 ENCODE Processing Pipeline 9a4c802443971c8979d1620fd782b891 https://www.encodeproject.org/files/ENCFF814RLQ/@@download/ENCFF814RLQ.bam GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO, out of date analysis partially characterized antibody missing control alignments ENCFF978NVP bam alignments ENCSR731LHZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens E4F1-human ENCAB944PGR DNA False 2018-01-26 ENCODE 1 100 ENCFF603CIN, ENCFF643CGH, ENCFF772FZX 2956929565 ENCODE Processing Pipeline 6fb467814d689848536386e13bdd4c89 https://www.encodeproject.org/files/ENCFF978NVP/@@download/ENCFF978NVP.bam GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO, out of date analysis partially characterized antibody missing control alignments ENCFF606IOS bam alignments ENCSR731LHZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens E4F1-human ENCAB944PGR DNA False 2018-01-26 ENCODE 2 100 ENCFF243UPQ, ENCFF301GHT, ENCFF643CGH 3716858972 ENCODE Processing Pipeline a83de8b84accdca907a0e96e12719965 https://www.encodeproject.org/files/ENCFF606IOS/@@download/ENCFF606IOS.bam GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO, out of date analysis partially characterized antibody missing control alignments ENCFF773EKF bigWig signal p-value ENCSR731LHZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens E4F1-human ENCAB944PGR DNA False 2018-01-26 ENCODE 1 ENCFF978NVP 974122752 ENCODE Processing Pipeline 2b3961559f73c019c6ea60aa39d47251 https://www.encodeproject.org/files/ENCFF773EKF/@@download/ENCFF773EKF.bigWig GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO, out of date analysis partially characterized antibody missing control alignments ENCFF836FAZ bigWig signal p-value ENCSR731LHZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens E4F1-human ENCAB944PGR DNA False 2018-01-26 ENCODE 2 ENCFF606IOS 1098288154 ENCODE Processing Pipeline 50386b48b9fedc7d4da533d89a0bffd6 https://www.encodeproject.org/files/ENCFF836FAZ/@@download/ENCFF836FAZ.bigWig GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO, out of date analysis partially characterized antibody missing control alignments ENCFF607YAQ bigWig signal p-value ENCSR731LHZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens E4F1-human ENCAB944PGR DNA False 2018-01-26 ENCODE 1, 2 ENCFF606IOS, ENCFF978NVP 1594857046 ENCODE Processing Pipeline 43d97a94a87d10d70b575e98d212eef8 https://www.encodeproject.org/files/ENCFF607YAQ/@@download/ENCFF607YAQ.bigWig GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO, out of date analysis partially characterized antibody missing control alignments ENCFF784ASP bigWig fold change over control ENCSR731LHZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens E4F1-human ENCAB944PGR DNA False 2018-01-26 ENCODE 1 ENCFF978NVP 954786762 ENCODE Processing Pipeline c4e9d76a4edbea6d67c877cbc3c17513 https://www.encodeproject.org/files/ENCFF784ASP/@@download/ENCFF784ASP.bigWig GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO, out of date analysis partially characterized antibody missing control alignments ENCFF548YTZ bigWig fold change over control ENCSR731LHZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens E4F1-human ENCAB944PGR DNA False 2018-01-26 ENCODE 2 ENCFF606IOS 1073611652 ENCODE Processing Pipeline a399bacb426fa8d375343761df6eb437 https://www.encodeproject.org/files/ENCFF548YTZ/@@download/ENCFF548YTZ.bigWig GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO, out of date analysis partially characterized antibody missing control alignments ENCFF113PXT bigWig fold change over control ENCSR731LHZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens E4F1-human ENCAB944PGR DNA False 2018-01-26 ENCODE 1, 2 ENCFF606IOS, ENCFF978NVP 1883832948 ENCODE Processing Pipeline d0a1f005012675968adce9e5dd09b331 https://www.encodeproject.org/files/ENCFF113PXT/@@download/ENCFF113PXT.bigWig GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO, out of date analysis partially characterized antibody missing control alignments ENCFF506JUK bed narrowPeak peaks ENCSR731LHZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens E4F1-human ENCAB944PGR DNA False 2018-01-26 ENCODE 2 ENCFF606IOS 6738279 ENCODE Processing Pipeline 25fef98854418601d3caea60929b46fd https://www.encodeproject.org/files/ENCFF506JUK/@@download/ENCFF506JUK.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO, out of date analysis partially characterized antibody missing control alignments ENCFF284HJU bed narrowPeak peaks ENCSR731LHZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens E4F1-human ENCAB944PGR DNA False 2018-01-26 ENCODE 1 ENCFF978NVP 6837990 ENCODE Processing Pipeline d390b2c14befc527a5dd53184016cd41 https://www.encodeproject.org/files/ENCFF284HJU/@@download/ENCFF284HJU.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO, out of date analysis partially characterized antibody missing control alignments ENCFF631LDS bed narrowPeak peaks ENCSR731LHZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens E4F1-human ENCAB944PGR DNA False 2018-01-26 ENCODE 1, 2 ENCFF606IOS, ENCFF978NVP 7143064 ENCODE Processing Pipeline 8096a9f983d2b12fd5a980bd4e381c18 https://www.encodeproject.org/files/ENCFF631LDS/@@download/ENCFF631LDS.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO, out of date analysis partially characterized antibody missing control alignments ENCFF451ESW bigBed narrowPeak peaks ENCSR731LHZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens E4F1-human ENCAB944PGR DNA False 2018-01-26 ENCODE 1 ENCFF284HJU 12668233 ENCODE Processing Pipeline 2e378b6450c1898b2e91e24d5d5865f8 https://www.encodeproject.org/files/ENCFF451ESW/@@download/ENCFF451ESW.bigBed GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO, out of date analysis partially characterized antibody missing control alignments ENCFF158DBE bigBed narrowPeak peaks ENCSR731LHZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens E4F1-human ENCAB944PGR DNA False 2018-01-26 ENCODE 2 ENCFF506JUK 13120238 ENCODE Processing Pipeline b8fad568eaba64effc5f4fd07999fff4 https://www.encodeproject.org/files/ENCFF158DBE/@@download/ENCFF158DBE.bigBed GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO, out of date analysis partially characterized antibody missing control alignments ENCFF362ESR bigBed narrowPeak peaks ENCSR731LHZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens E4F1-human ENCAB944PGR DNA False 2018-01-26 ENCODE 1, 2 ENCFF631LDS 12694324 ENCODE Processing Pipeline 8477771ede0b672c787738dc64902981 https://www.encodeproject.org/files/ENCFF362ESR/@@download/ENCFF362ESR.bigBed GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO, out of date analysis partially characterized antibody missing control alignments ENCFF233MGP bed narrowPeak conservative idr thresholded peaks ENCSR731LHZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens E4F1-human ENCAB944PGR DNA False 2018-01-26 ENCODE 1, 2 ENCFF284HJU, ENCFF419RSJ, ENCFF506JUK, ENCFF631LDS 458989 ENCODE Processing Pipeline 49ffc29035e20db821e4e5b240c87134 https://www.encodeproject.org/files/ENCFF233MGP/@@download/ENCFF233MGP.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO, out of date analysis partially characterized antibody missing control alignments ENCFF930PVO bigBed narrowPeak conservative idr thresholded peaks ENCSR731LHZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens E4F1-human ENCAB944PGR DNA False 2018-01-26 ENCODE 1, 2 ENCFF233MGP 905817 ENCODE Processing Pipeline 19f6e3405516eb087b8a0fc848117606 https://www.encodeproject.org/files/ENCFF930PVO/@@download/ENCFF930PVO.bigBed GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO, out of date analysis partially characterized antibody missing control alignments ENCFF752KNU bed narrowPeak optimal idr thresholded peaks ENCSR731LHZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens E4F1-human ENCAB944PGR DNA False 2018-01-26 ENCODE 1, 2 ENCFF284HJU, ENCFF419RSJ, ENCFF506JUK, ENCFF631LDS 512900 ENCODE Processing Pipeline c83d74e0214a815c337cb5a61b85bcd1 https://www.encodeproject.org/files/ENCFF752KNU/@@download/ENCFF752KNU.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO, out of date analysis partially characterized antibody missing control alignments ENCFF157NHH bigBed narrowPeak optimal idr thresholded peaks ENCSR731LHZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens E4F1-human ENCAB944PGR DNA False 2018-01-26 ENCODE 1, 2 ENCFF752KNU 984582 ENCODE Processing Pipeline edf40e7e37fbce6c6ccc6152b0d27b62 https://www.encodeproject.org/files/ENCFF157NHH/@@download/ENCFF157NHH.bigBed GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO, out of date analysis partially characterized antibody missing control alignments ENCFF640CID bigBed narrowPeak conservative idr thresholded peaks ENCSR731LHZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens E4F1-human ENCAB944PGR DNA False 2018-01-26 ENCODE 1, 2 ENCFF211YKN 837206 ENCODE Processing Pipeline 46f65c6418951f0d0f12e741bd9d7d61 https://www.encodeproject.org/files/ENCFF640CID/@@download/ENCFF640CID.bigBed hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO, out of date analysis partially characterized antibody missing control alignments ENCFF211YKN bed narrowPeak conservative idr thresholded peaks ENCSR731LHZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens E4F1-human ENCAB944PGR DNA False 2018-01-26 ENCODE 1, 2 ENCFF001TDO, ENCFF249GYD, ENCFF713DFK, ENCFF952KDF 407079 ENCODE Processing Pipeline b65839c1922ebaf71ca69b22aa855b63 https://www.encodeproject.org/files/ENCFF211YKN/@@download/ENCFF211YKN.bed.gz hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO, out of date analysis partially characterized antibody missing control alignments ENCFF083YCQ bed narrowPeak optimal idr thresholded peaks ENCSR731LHZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens E4F1-human ENCAB944PGR DNA False 2018-01-26 ENCODE 1, 2 ENCFF001TDO, ENCFF249GYD, ENCFF713DFK, ENCFF952KDF 454049 ENCODE Processing Pipeline 6f611b81e2e1ca4ecaa174c4c3617412 https://www.encodeproject.org/files/ENCFF083YCQ/@@download/ENCFF083YCQ.bed.gz hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO, out of date analysis partially characterized antibody missing control alignments ENCFF749TCC bigBed narrowPeak optimal idr thresholded peaks ENCSR731LHZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens E4F1-human ENCAB944PGR DNA False 2018-01-26 ENCODE 1, 2 ENCFF083YCQ 906604 ENCODE Processing Pipeline 0c4d09d07d5d56deb68fd880ed1aad75 https://www.encodeproject.org/files/ENCFF749TCC/@@download/ENCFF749TCC.bigBed hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO, out of date analysis partially characterized antibody missing control alignments ENCFF447FBL fastq reads ENCSR731LHZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens E4F1-human ENCAB944PGR DNA False 2018-01-26 ENCODE 1 1 100 paired-ended 1 ENCFF953JKI 2124395730 Michael Snyder, Stanford 873f87c166f6e0971402a33a8da41b30 https://www.encodeproject.org/files/ENCFF447FBL/@@download/ENCFF447FBL.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFF/ released low read depth, mild to moderate bottlenecking experiment not submitted to GEO, out of date analysis partially characterized antibody missing control alignments ENCFF953JKI fastq reads ENCSR731LHZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens E4F1-human ENCAB944PGR DNA False 2018-01-26 ENCODE 1 1 100 paired-ended 2 ENCFF447FBL 2297559189 Michael Snyder, Stanford 0bcaddea1498546f97b391f93eb81180 https://www.encodeproject.org/files/ENCFF953JKI/@@download/ENCFF953JKI.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFH/ released low read depth, mild to moderate bottlenecking experiment not submitted to GEO, out of date analysis partially characterized antibody missing control alignments ENCFF000YPE fastq reads ENCSR000FAX ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 1 1 27 single-ended 329300728 Sherman Weissman, Yale 9a3a08ff64b1c111c26c162ea3248c60 https://www.encodeproject.org/files/ENCFF000YPE/@@download/ENCFF000YPE.fastq.gz Illumina Genome Analyzer /files/ENCFF000YPF/ released mixed read lengths, control low read depth, inconsistent control read length biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF000YPG fastq reads ENCSR000FAX ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 2 1 34 single-ended 647167711 Sherman Weissman, Yale 64858984304fa04a903d5482f4de8eac https://www.encodeproject.org/files/ENCFF000YPG/@@download/ENCFF000YPG.fastq.gz Illumina Genome Analyzer /files/ENCFF000YPF/ released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF000YWD bam alignments ENCSR000FAX ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 1 ENCFF000YPE 423263036 Sherman Weissman, Yale 677ce195839dd2290a9ec9accfa33bd9 https://www.encodeproject.org/files/ENCFF000YWD/@@download/ENCFF000YWD.bam hg19 archived mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF000YWE bigBed narrowPeak peaks ENCSR000FAX ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE ENCFF001VOE 514380 Sherman Weissman, Yale bb08be0179d566580df43004c4644a55 https://www.encodeproject.org/files/ENCFF000YWE/@@download/ENCFF000YWE.bigBed hg19 archived mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF000YWF bigWig signal ENCSR000FAX ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 309316620 Sherman Weissman, Yale d1a90667a60324bd242c793a70e535c0 https://www.encodeproject.org/files/ENCFF000YWF/@@download/ENCFF000YWF.bigWig hg19 archived mixed read lengths, control low read depth biological replicates with identical biosample, missing derived_from insufficient read length, insufficient read depth ENCFF000YWG bam alignments ENCSR000FAX ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 2 ENCFF000YPG 801462968 Sherman Weissman, Yale f1176da0d135232793db3617d3104252 https://www.encodeproject.org/files/ENCFF000YWG/@@download/ENCFF000YWG.bam hg19 archived mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF001VOE bed narrowPeak peaks ENCSR000FAX ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 194293 Sherman Weissman, Yale 12aaf5f1a39afac91f5ca2aba90eb3dd https://www.encodeproject.org/files/ENCFF001VOE/@@download/ENCFF001VOE.bed.gz hg19 archived mixed read lengths, control low read depth biological replicates with identical biosample, missing derived_from insufficient read length, insufficient read depth ENCFF002CXN bed narrowPeak optimal idr thresholded peaks ENCSR000FAX ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 271627 ENCODE Consortium Analysis Working Group 2e251f0a3e82ac18e6e3da60a5ce00f8 https://www.encodeproject.org/files/ENCFF002CXN/@@download/ENCFF002CXN.bed.gz hg19 archived mixed read lengths, control low read depth biological replicates with identical biosample, missing derived_from insufficient read length, insufficient read depth ENCFF189QYI bigBed narrowPeak optimal idr thresholded peaks ENCSR000FAX ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE ENCFF002CXN 737824 ENCODE Consortium e980cb12a7c54def08f32cbf38db1b50 https://www.encodeproject.org/files/ENCFF189QYI/@@download/ENCFF189QYI.bigBed hg19 archived mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF439MGC bam unfiltered alignments ENCSR000FAX ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 1 27 ENCFF000YPE, ENCFF807MUK 423741176 ENCODE Processing Pipeline 6624e18c79355e37cbbec69c04681158 https://www.encodeproject.org/files/ENCFF439MGC/@@download/ENCFF439MGC.bam hg19 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF298OSL bam unfiltered alignments ENCSR000FAX ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 1 27 ENCFF000YPE, ENCFF643CGH 424305738 ENCODE Processing Pipeline e000d0154fff7d42f819b334db5ba299 https://www.encodeproject.org/files/ENCFF298OSL/@@download/ENCFF298OSL.bam GRCh38 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF788CTS bam alignments ENCSR000FAX ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 1 27 ENCFF000YPE, ENCFF807MUK 285220741 ENCODE Processing Pipeline 686df9f5163b705a3a63433754eeaa44 https://www.encodeproject.org/files/ENCFF788CTS/@@download/ENCFF788CTS.bam hg19 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF475BJQ bam alignments ENCSR000FAX ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 1 27 ENCFF000YPE, ENCFF643CGH 284873727 ENCODE Processing Pipeline 0abdbfc03878a1151752df5b4390bec4 https://www.encodeproject.org/files/ENCFF475BJQ/@@download/ENCFF475BJQ.bam GRCh38 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF675OWG bam unfiltered alignments ENCSR000FAX ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 2 27 ENCFF000YPG, ENCFF643CGH 729367507 ENCODE Processing Pipeline 6a2d9c5b2905e63242b3edfdc41e5dc0 https://www.encodeproject.org/files/ENCFF675OWG/@@download/ENCFF675OWG.bam GRCh38 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF278NAG bam alignments ENCSR000FAX ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 2 27 ENCFF000YPG, ENCFF807MUK 338023760 ENCODE Processing Pipeline f3a03006934aa7929e816df99a79ae98 https://www.encodeproject.org/files/ENCFF278NAG/@@download/ENCFF278NAG.bam hg19 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF275VZQ bam unfiltered alignments ENCSR000FAX ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 2 27 ENCFF000YPG, ENCFF807MUK 727492863 ENCODE Processing Pipeline 4652ca4833c5de7c74bb9c92ed9bdb02 https://www.encodeproject.org/files/ENCFF275VZQ/@@download/ENCFF275VZQ.bam hg19 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF929JPT bam alignments ENCSR000FAX ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 2 27 ENCFF000YPG, ENCFF643CGH 337545118 ENCODE Processing Pipeline ccb509b4c245411e0e83a3882e99af3f https://www.encodeproject.org/files/ENCFF929JPT/@@download/ENCFF929JPT.bam GRCh38 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF736OTR bigWig signal p-value ENCSR000FAX ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF278NAG, ENCFF788CTS, ENCFF998GMZ 315588562 ENCODE Processing Pipeline 9bb9749727db4b0c221c0e1009969140 https://www.encodeproject.org/files/ENCFF736OTR/@@download/ENCFF736OTR.bigWig hg19 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF940MAL bigWig signal p-value ENCSR000FAX ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 1 ENCFF788CTS, ENCFF998GMZ 296046435 ENCODE Processing Pipeline 9c0d9f238dc39036ef057946b85d3010 https://www.encodeproject.org/files/ENCFF940MAL/@@download/ENCFF940MAL.bigWig hg19 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF443NDS bigWig signal p-value ENCSR000FAX ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 2 ENCFF278NAG, ENCFF998GMZ 249695647 ENCODE Processing Pipeline c6880bb3901ea638a11e1b162ddbe534 https://www.encodeproject.org/files/ENCFF443NDS/@@download/ENCFF443NDS.bigWig hg19 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF510ERL bigWig fold change over control ENCSR000FAX ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 1 ENCFF788CTS, ENCFF998GMZ 141620488 ENCODE Processing Pipeline 732012a195ed21081cd5a3963f590b5f https://www.encodeproject.org/files/ENCFF510ERL/@@download/ENCFF510ERL.bigWig hg19 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF623NTU bigWig fold change over control ENCSR000FAX ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF278NAG, ENCFF788CTS, ENCFF998GMZ 254603629 ENCODE Processing Pipeline e2a2258e7e61d985ffb0d096ad276352 https://www.encodeproject.org/files/ENCFF623NTU/@@download/ENCFF623NTU.bigWig hg19 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF195EME bed narrowPeak peaks ENCSR000FAX ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 2 ENCFF278NAG, ENCFF998GMZ 4582388 ENCODE Processing Pipeline 2f94b0529ae9ecc665a2ddfb4eaa134b https://www.encodeproject.org/files/ENCFF195EME/@@download/ENCFF195EME.bed.gz hg19 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF841MAF bigWig fold change over control ENCSR000FAX ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 2 ENCFF278NAG, ENCFF998GMZ 149528462 ENCODE Processing Pipeline c47c628d35e2ab6fd6496d5f5d4b9381 https://www.encodeproject.org/files/ENCFF841MAF/@@download/ENCFF841MAF.bigWig hg19 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF196LRG bed narrowPeak peaks ENCSR000FAX ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 1 ENCFF788CTS, ENCFF998GMZ 5084258 ENCODE Processing Pipeline 938c4d948378101e300b807bce985979 https://www.encodeproject.org/files/ENCFF196LRG/@@download/ENCFF196LRG.bed.gz hg19 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF274EWP bed narrowPeak peaks ENCSR000FAX ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF278NAG, ENCFF788CTS, ENCFF998GMZ 5988657 ENCODE Processing Pipeline 1135ed2b1bb71be45b98986e3e1bd661 https://www.encodeproject.org/files/ENCFF274EWP/@@download/ENCFF274EWP.bed.gz hg19 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF106UQL bigBed narrowPeak peaks ENCSR000FAX ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 1 ENCFF196LRG 10964743 ENCODE Processing Pipeline 03a09b5f7b339831fb1b1b8c8b0cf99b https://www.encodeproject.org/files/ENCFF106UQL/@@download/ENCFF106UQL.bigBed hg19 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF286HZT bed narrowPeak conservative idr thresholded peaks ENCSR000FAX ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF001TDO, ENCFF195EME, ENCFF196LRG, ENCFF274EWP 305034 ENCODE Processing Pipeline 90cfa1e7c0776ce0feae8e32068157cf https://www.encodeproject.org/files/ENCFF286HZT/@@download/ENCFF286HZT.bed.gz hg19 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF826OYU bigBed narrowPeak peaks ENCSR000FAX ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 2 ENCFF195EME 11216588 ENCODE Processing Pipeline f5d7af778d39ab04661f5a186a910e8e https://www.encodeproject.org/files/ENCFF826OYU/@@download/ENCFF826OYU.bigBed hg19 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF061YOF bigBed narrowPeak peaks ENCSR000FAX ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF274EWP 12398898 ENCODE Processing Pipeline 5888438de54d0f72ce92cc82f290be95 https://www.encodeproject.org/files/ENCFF061YOF/@@download/ENCFF061YOF.bigBed hg19 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF206YXX bed narrowPeak optimal idr thresholded peaks ENCSR000FAX ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF001TDO, ENCFF195EME, ENCFF196LRG, ENCFF274EWP 326220 ENCODE Processing Pipeline c00b821c15db119f2de9065176aee084 https://www.encodeproject.org/files/ENCFF206YXX/@@download/ENCFF206YXX.bed.gz hg19 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF205FCW bigBed narrowPeak conservative idr thresholded peaks ENCSR000FAX ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF286HZT 660550 ENCODE Processing Pipeline 1abd3dfc0c95d0bca8743375b8c50898 https://www.encodeproject.org/files/ENCFF205FCW/@@download/ENCFF205FCW.bigBed hg19 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF369FRB bigBed narrowPeak optimal idr thresholded peaks ENCSR000FAX ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF206YXX 690847 ENCODE Processing Pipeline 348ad2026b4dd35dbf5c79c05206fb59 https://www.encodeproject.org/files/ENCFF369FRB/@@download/ENCFF369FRB.bigBed hg19 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF989FUJ bigWig signal p-value ENCSR000FAX ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 1 ENCFF332CUX, ENCFF475BJQ 255864977 ENCODE Processing Pipeline 5882d5a6674e44b23123818cfb6273d5 https://www.encodeproject.org/files/ENCFF989FUJ/@@download/ENCFF989FUJ.bigWig GRCh38 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF861NNZ bigWig fold change over control ENCSR000FAX ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 1 ENCFF332CUX, ENCFF475BJQ 142615713 ENCODE Processing Pipeline 4b8bd852cade26a2adb41cbbed1c0a20 https://www.encodeproject.org/files/ENCFF861NNZ/@@download/ENCFF861NNZ.bigWig GRCh38 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF743ZUA bigWig signal p-value ENCSR000FAX ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 2 ENCFF332CUX, ENCFF929JPT 286590838 ENCODE Processing Pipeline c722a05e9ba503258d9fac16acdd387f https://www.encodeproject.org/files/ENCFF743ZUA/@@download/ENCFF743ZUA.bigWig GRCh38 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF531BLJ bigWig signal p-value ENCSR000FAX ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF332CUX, ENCFF475BJQ, ENCFF929JPT 315095563 ENCODE Processing Pipeline 071327219cce5d4bcd87937d1fb47a90 https://www.encodeproject.org/files/ENCFF531BLJ/@@download/ENCFF531BLJ.bigWig GRCh38 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF595XHL bigWig fold change over control ENCSR000FAX ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 2 ENCFF332CUX, ENCFF929JPT 149266035 ENCODE Processing Pipeline 823b44d8f978a2baa7fffc209b787b31 https://www.encodeproject.org/files/ENCFF595XHL/@@download/ENCFF595XHL.bigWig GRCh38 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF904LCF bigWig fold change over control ENCSR000FAX ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF332CUX, ENCFF475BJQ, ENCFF929JPT 253027126 ENCODE Processing Pipeline 41023bb285e27510de7a3ff2939a7c74 https://www.encodeproject.org/files/ENCFF904LCF/@@download/ENCFF904LCF.bigWig GRCh38 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF295DIE bed narrowPeak peaks ENCSR000FAX ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 1 ENCFF332CUX, ENCFF475BJQ 4994098 ENCODE Processing Pipeline 07d06a7fb9ac465ce1c0edfb3082eca9 https://www.encodeproject.org/files/ENCFF295DIE/@@download/ENCFF295DIE.bed.gz GRCh38 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF491BJA bed narrowPeak peaks ENCSR000FAX ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 2 ENCFF332CUX, ENCFF929JPT 4549731 ENCODE Processing Pipeline ef8f032f31d6fe84d9021b8d4ab23b58 https://www.encodeproject.org/files/ENCFF491BJA/@@download/ENCFF491BJA.bed.gz GRCh38 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF856BRP bed narrowPeak peaks ENCSR000FAX ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF332CUX, ENCFF475BJQ, ENCFF929JPT 6020971 ENCODE Processing Pipeline 66331f367d600d369f3acbe698188ec6 https://www.encodeproject.org/files/ENCFF856BRP/@@download/ENCFF856BRP.bed.gz GRCh38 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF523HWM bigBed narrowPeak peaks ENCSR000FAX ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 1 ENCFF295DIE 10850527 ENCODE Processing Pipeline abeb1e103a2387de887c4be61a428630 https://www.encodeproject.org/files/ENCFF523HWM/@@download/ENCFF523HWM.bigBed GRCh38 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF119ETL bigBed narrowPeak peaks ENCSR000FAX ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 2 ENCFF491BJA 11176560 ENCODE Processing Pipeline 213b062159a29514b5e0423999858a5b https://www.encodeproject.org/files/ENCFF119ETL/@@download/ENCFF119ETL.bigBed GRCh38 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF195TVF bigBed narrowPeak peaks ENCSR000FAX ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF856BRP 12444639 ENCODE Processing Pipeline e183ac09266cb52a8190ae8d375e9434 https://www.encodeproject.org/files/ENCFF195TVF/@@download/ENCFF195TVF.bigBed GRCh38 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF716CWM bed narrowPeak conservative idr thresholded peaks ENCSR000FAX ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF295DIE, ENCFF419RSJ, ENCFF491BJA, ENCFF856BRP 313213 ENCODE Processing Pipeline 5158e8f62bcdb156bc3be752650f8133 https://www.encodeproject.org/files/ENCFF716CWM/@@download/ENCFF716CWM.bed.gz GRCh38 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF671FFN bigBed narrowPeak conservative idr thresholded peaks ENCSR000FAX ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF716CWM 815214 ENCODE Processing Pipeline 0e58b183f1d0005d78487ce301ac09d9 https://www.encodeproject.org/files/ENCFF671FFN/@@download/ENCFF671FFN.bigBed GRCh38 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF798PUX bed narrowPeak optimal idr thresholded peaks ENCSR000FAX ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF295DIE, ENCFF419RSJ, ENCFF491BJA, ENCFF856BRP 336981 ENCODE Processing Pipeline bc2c108096d06887b68705dd72015e76 https://www.encodeproject.org/files/ENCFF798PUX/@@download/ENCFF798PUX.bed.gz GRCh38 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF390DQM bigBed narrowPeak optimal idr thresholded peaks ENCSR000FAX ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF798PUX 855268 ENCODE Processing Pipeline 7fe7095ccc95ead588ece385e95942e4 https://www.encodeproject.org/files/ENCFF390DQM/@@download/ENCFF390DQM.bigBed GRCh38 released mixed read lengths, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF000ZCY bam alignments ENCSR000EHG ChIP-seq EFO:0002067 K562 cell line Homo sapiens USF2-human ENCAB000AMH DNA see document see document False 2011-10-29 ENCODE 1 ENCFF000ZDJ 362265894 Michael Snyder, Stanford f34cd9ef1a612d0f3d688643270ebb39 https://www.encodeproject.org/files/ENCFF000ZCY/@@download/ENCFF000ZCY.bam hg19 archived low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF000ZCZ bigBed narrowPeak peaks ENCSR000EHG ChIP-seq EFO:0002067 K562 cell line Homo sapiens USF2-human ENCAB000AMH DNA see document see document False 2011-10-29 ENCODE ENCFF001VPH 432162 Michael Snyder, Stanford dd8cb5efd8c2548c9b1e97812320e874 https://www.encodeproject.org/files/ENCFF000ZCZ/@@download/ENCFF000ZCZ.bigBed hg19 archived low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF000ZDA bam alignments ENCSR000EHG ChIP-seq EFO:0002067 K562 cell line Homo sapiens USF2-human ENCAB000AMH DNA see document see document False 2011-10-29 ENCODE 2 ENCFF000ZDK 358733775 Michael Snyder, Stanford 6926eb846aaa2ba516c0e0f8f36d07d2 https://www.encodeproject.org/files/ENCFF000ZDA/@@download/ENCFF000ZDA.bam hg19 archived low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF000ZDB bigWig signal ENCSR000EHG ChIP-seq EFO:0002067 K562 cell line Homo sapiens USF2-human ENCAB000AMH DNA see document see document False 2011-10-29 ENCODE 454873472 Michael Snyder, Stanford 42fb1e508407ae083040191d6a5f8212 https://www.encodeproject.org/files/ENCFF000ZDB/@@download/ENCFF000ZDB.bigWig hg19 archived low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample, missing derived_from ENCFF000ZDJ fastq reads ENCSR000EHG ChIP-seq EFO:0002067 K562 cell line Homo sapiens USF2-human ENCAB000AMH DNA see document see document False 2011-10-29 ENCODE 1 1 36 single-ended 848818341 Michael Snyder, Stanford 0d6995b44abfbf619522316bd32c3c43 https://www.encodeproject.org/files/ENCFF000ZDJ/@@download/ENCFF000ZDJ.fastq.gz Illumina Genome Analyzer /files/ENCFF000YRB/ released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF000ZDK fastq reads ENCSR000EHG ChIP-seq EFO:0002067 K562 cell line Homo sapiens USF2-human ENCAB000AMH DNA see document see document False 2011-10-29 ENCODE 2 1 36 single-ended 829087480 Michael Snyder, Stanford 1e36b6132e6349032aa303f7f4ecf29f https://www.encodeproject.org/files/ENCFF000ZDK/@@download/ENCFF000ZDK.fastq.gz Illumina Genome Analyzer /files/ENCFF000YRB/ released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF001VPH bed narrowPeak peaks ENCSR000EHG ChIP-seq EFO:0002067 K562 cell line Homo sapiens USF2-human ENCAB000AMH DNA see document see document False 2011-10-29 ENCODE 183098 Michael Snyder, Stanford ffaffe9000db54e46d06658318118df8 https://www.encodeproject.org/files/ENCFF001VPH/@@download/ENCFF001VPH.bed.gz hg19 archived low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample, missing derived_from ENCFF002CYP bed narrowPeak optimal idr thresholded peaks ENCSR000EHG ChIP-seq EFO:0002067 K562 cell line Homo sapiens USF2-human ENCAB000AMH DNA see document see document False 2011-10-29 ENCODE 82850 ENCODE Consortium Analysis Working Group 23baed3c990373140369f62e3ea7b8d4 https://www.encodeproject.org/files/ENCFF002CYP/@@download/ENCFF002CYP.bed.gz hg19 archived low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample, missing derived_from ENCFF127KWI bigBed narrowPeak optimal idr thresholded peaks ENCSR000EHG ChIP-seq EFO:0002067 K562 cell line Homo sapiens USF2-human ENCAB000AMH DNA see document see document False 2011-10-29 ENCODE ENCFF002CYP 275266 ENCODE Consortium 305d84709f8b6b6c4edac61c151969bb https://www.encodeproject.org/files/ENCFF127KWI/@@download/ENCFF127KWI.bigBed hg19 archived low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF424FKD bam unfiltered alignments ENCSR000EHG ChIP-seq EFO:0002067 K562 cell line Homo sapiens USF2-human ENCAB000AMH DNA see document see document False 2011-10-29 ENCODE 2 36 ENCFF000ZDK, ENCFF643CGH 1018153503 ENCODE Processing Pipeline 3c269c810bc423ab1ff816d847a90ea3 https://www.encodeproject.org/files/ENCFF424FKD/@@download/ENCFF424FKD.bam GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF420ZVF bam alignments ENCSR000EHG ChIP-seq EFO:0002067 K562 cell line Homo sapiens USF2-human ENCAB000AMH DNA see document see document False 2011-10-29 ENCODE 2 36 ENCFF000ZDK, ENCFF643CGH 658300249 ENCODE Processing Pipeline 69a73b2a3c93a1e2ddc20ec3ef9c80c2 https://www.encodeproject.org/files/ENCFF420ZVF/@@download/ENCFF420ZVF.bam GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF241NUY bam unfiltered alignments ENCSR000EHG ChIP-seq EFO:0002067 K562 cell line Homo sapiens USF2-human ENCAB000AMH DNA see document see document False 2011-10-29 ENCODE 1 36 ENCFF000ZDJ, ENCFF643CGH 1045308628 ENCODE Processing Pipeline e38271b2aa6ed2e4d0f78bd1a2543a28 https://www.encodeproject.org/files/ENCFF241NUY/@@download/ENCFF241NUY.bam GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF434RFX bam alignments ENCSR000EHG ChIP-seq EFO:0002067 K562 cell line Homo sapiens USF2-human ENCAB000AMH DNA see document see document False 2011-10-29 ENCODE 1 36 ENCFF000ZDJ, ENCFF643CGH 664430927 ENCODE Processing Pipeline 58e6e7aebce2f9bf943101a3124815e8 https://www.encodeproject.org/files/ENCFF434RFX/@@download/ENCFF434RFX.bam GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF775IQU bam unfiltered alignments ENCSR000EHG ChIP-seq EFO:0002067 K562 cell line Homo sapiens USF2-human ENCAB000AMH DNA see document see document False 2011-10-29 ENCODE 2 36 ENCFF000ZDK, ENCFF807MUK 1012789401 ENCODE Processing Pipeline b0a88b236aba4317ff3917189cdb7ef5 https://www.encodeproject.org/files/ENCFF775IQU/@@download/ENCFF775IQU.bam hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF842LBP bam alignments ENCSR000EHG ChIP-seq EFO:0002067 K562 cell line Homo sapiens USF2-human ENCAB000AMH DNA see document see document False 2011-10-29 ENCODE 2 36 ENCFF000ZDK, ENCFF807MUK 658689988 ENCODE Processing Pipeline bdd2ebb549ed00c308d41395586ef435 https://www.encodeproject.org/files/ENCFF842LBP/@@download/ENCFF842LBP.bam hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF483JQH bam unfiltered alignments ENCSR000EHG ChIP-seq EFO:0002067 K562 cell line Homo sapiens USF2-human ENCAB000AMH DNA see document see document False 2011-10-29 ENCODE 1 36 ENCFF000ZDJ, ENCFF807MUK 1039973618 ENCODE Processing Pipeline acc3717252f70fbbd19fc8b26383fe0c https://www.encodeproject.org/files/ENCFF483JQH/@@download/ENCFF483JQH.bam hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF851ZZA bam alignments ENCSR000EHG ChIP-seq EFO:0002067 K562 cell line Homo sapiens USF2-human ENCAB000AMH DNA see document see document False 2011-10-29 ENCODE 1 36 ENCFF000ZDJ, ENCFF807MUK 664834462 ENCODE Processing Pipeline 04ce13717d085bc10feb84b9581a1f2a https://www.encodeproject.org/files/ENCFF851ZZA/@@download/ENCFF851ZZA.bam hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF242BZV bigWig signal p-value ENCSR000EHG ChIP-seq EFO:0002067 K562 cell line Homo sapiens USF2-human ENCAB000AMH DNA see document see document False 2011-10-29 ENCODE 1 ENCFF023NGN, ENCFF434RFX 432251755 ENCODE Processing Pipeline 4849a99c917db296609767a9713b2acc https://www.encodeproject.org/files/ENCFF242BZV/@@download/ENCFF242BZV.bigWig GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF299VHD bigWig signal p-value ENCSR000EHG ChIP-seq EFO:0002067 K562 cell line Homo sapiens USF2-human ENCAB000AMH DNA see document see document False 2011-10-29 ENCODE 2 ENCFF023NGN, ENCFF420ZVF 500869138 ENCODE Processing Pipeline 5a7b7e4f4c51dfbf958126b4eaca02ab https://www.encodeproject.org/files/ENCFF299VHD/@@download/ENCFF299VHD.bigWig GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF881FKP bigWig signal p-value ENCSR000EHG ChIP-seq EFO:0002067 K562 cell line Homo sapiens USF2-human ENCAB000AMH DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF023NGN, ENCFF420ZVF, ENCFF434RFX 541682886 ENCODE Processing Pipeline 37eeadd5baafd144901f10ffdedd0b20 https://www.encodeproject.org/files/ENCFF881FKP/@@download/ENCFF881FKP.bigWig GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF299KLU bigWig fold change over control ENCSR000EHG ChIP-seq EFO:0002067 K562 cell line Homo sapiens USF2-human ENCAB000AMH DNA see document see document False 2011-10-29 ENCODE 2 ENCFF023NGN, ENCFF420ZVF 332707456 ENCODE Processing Pipeline e810fcc597e22d101b1a9066764f05af https://www.encodeproject.org/files/ENCFF299KLU/@@download/ENCFF299KLU.bigWig GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF748TMK bigWig fold change over control ENCSR000EHG ChIP-seq EFO:0002067 K562 cell line Homo sapiens USF2-human ENCAB000AMH DNA see document see document False 2011-10-29 ENCODE 1 ENCFF023NGN, ENCFF434RFX 336581316 ENCODE Processing Pipeline b731e8af0491ee405fcff8e9024dc2fd https://www.encodeproject.org/files/ENCFF748TMK/@@download/ENCFF748TMK.bigWig GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF266FDB bigWig fold change over control ENCSR000EHG ChIP-seq EFO:0002067 K562 cell line Homo sapiens USF2-human ENCAB000AMH DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF023NGN, ENCFF420ZVF, ENCFF434RFX 549797384 ENCODE Processing Pipeline 3161841958dce7a3208228c6f0e05abd https://www.encodeproject.org/files/ENCFF266FDB/@@download/ENCFF266FDB.bigWig GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF891RTU bed narrowPeak peaks ENCSR000EHG ChIP-seq EFO:0002067 K562 cell line Homo sapiens USF2-human ENCAB000AMH DNA see document see document False 2011-10-29 ENCODE 1 ENCFF023NGN, ENCFF434RFX 4123952 ENCODE Processing Pipeline 432c5e28192a686478fcc45a5255b68b https://www.encodeproject.org/files/ENCFF891RTU/@@download/ENCFF891RTU.bed.gz GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF616QFY bigBed narrowPeak peaks ENCSR000EHG ChIP-seq EFO:0002067 K562 cell line Homo sapiens USF2-human ENCAB000AMH DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF998IVE 11133703 ENCODE Processing Pipeline dc31a9c06972dc42c3a0b918f0a32ef8 https://www.encodeproject.org/files/ENCFF616QFY/@@download/ENCFF616QFY.bigBed GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF420KJG bed narrowPeak peaks ENCSR000EHG ChIP-seq EFO:0002067 K562 cell line Homo sapiens USF2-human ENCAB000AMH DNA see document see document False 2011-10-29 ENCODE 2 ENCFF023NGN, ENCFF420ZVF 4212444 ENCODE Processing Pipeline 14a60ce2f87ff66cc864b4b3520f09d3 https://www.encodeproject.org/files/ENCFF420KJG/@@download/ENCFF420KJG.bed.gz GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF498WWJ bigBed narrowPeak conservative idr thresholded peaks ENCSR000EHG ChIP-seq EFO:0002067 K562 cell line Homo sapiens USF2-human ENCAB000AMH DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF602YIK 160339 ENCODE Processing Pipeline 32b81475e36b39856533869cd9b459f9 https://www.encodeproject.org/files/ENCFF498WWJ/@@download/ENCFF498WWJ.bigBed GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF998IVE bed narrowPeak peaks ENCSR000EHG ChIP-seq EFO:0002067 K562 cell line Homo sapiens USF2-human ENCAB000AMH DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF023NGN, ENCFF420ZVF, ENCFF434RFX 4798222 ENCODE Processing Pipeline bf859cab39d5c4220caf0f9ce086909a https://www.encodeproject.org/files/ENCFF998IVE/@@download/ENCFF998IVE.bed.gz GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF185HTG bigBed narrowPeak peaks ENCSR000EHG ChIP-seq EFO:0002067 K562 cell line Homo sapiens USF2-human ENCAB000AMH DNA see document see document False 2011-10-29 ENCODE 1 ENCFF891RTU 10447715 ENCODE Processing Pipeline de78d1bc226801800c823af39e8cbcd3 https://www.encodeproject.org/files/ENCFF185HTG/@@download/ENCFF185HTG.bigBed GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF834STQ bigBed narrowPeak peaks ENCSR000EHG ChIP-seq EFO:0002067 K562 cell line Homo sapiens USF2-human ENCAB000AMH DNA see document see document False 2011-10-29 ENCODE 2 ENCFF420KJG 10572925 ENCODE Processing Pipeline 52c802fbe87a0913d6283d665630aaec https://www.encodeproject.org/files/ENCFF834STQ/@@download/ENCFF834STQ.bigBed GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF425FVY bed narrowPeak optimal idr thresholded peaks ENCSR000EHG ChIP-seq EFO:0002067 K562 cell line Homo sapiens USF2-human ENCAB000AMH DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF419RSJ, ENCFF420KJG, ENCFF891RTU, ENCFF998IVE 64564 ENCODE Processing Pipeline a832fa37d29027be36f00c525b726315 https://www.encodeproject.org/files/ENCFF425FVY/@@download/ENCFF425FVY.bed.gz GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF602YIK bed narrowPeak conservative idr thresholded peaks ENCSR000EHG ChIP-seq EFO:0002067 K562 cell line Homo sapiens USF2-human ENCAB000AMH DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF419RSJ, ENCFF420KJG, ENCFF891RTU, ENCFF998IVE 62768 ENCODE Processing Pipeline 5891db2058400134fe8121810abcd9ac https://www.encodeproject.org/files/ENCFF602YIK/@@download/ENCFF602YIK.bed.gz GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF736VEI bigBed narrowPeak optimal idr thresholded peaks ENCSR000EHG ChIP-seq EFO:0002067 K562 cell line Homo sapiens USF2-human ENCAB000AMH DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF425FVY 163162 ENCODE Processing Pipeline 1ae8f2b8565200b1eda73f7d45e09640 https://www.encodeproject.org/files/ENCFF736VEI/@@download/ENCFF736VEI.bigBed GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF341CPU bigWig signal p-value ENCSR000EHG ChIP-seq EFO:0002067 K562 cell line Homo sapiens USF2-human ENCAB000AMH DNA see document see document False 2011-10-29 ENCODE 1 ENCFF710NTS, ENCFF851ZZA 403244825 ENCODE Processing Pipeline 4a37a7f10e7b2ddc81e79701b4d5d04c https://www.encodeproject.org/files/ENCFF341CPU/@@download/ENCFF341CPU.bigWig hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF611OHR bigWig fold change over control ENCSR000EHG ChIP-seq EFO:0002067 K562 cell line Homo sapiens USF2-human ENCAB000AMH DNA see document see document False 2011-10-29 ENCODE 1 ENCFF710NTS, ENCFF851ZZA 330227694 ENCODE Processing Pipeline 3b450b0e845d06e4d3a40e43339ed7dc https://www.encodeproject.org/files/ENCFF611OHR/@@download/ENCFF611OHR.bigWig hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF507QKZ bigWig signal p-value ENCSR000EHG ChIP-seq EFO:0002067 K562 cell line Homo sapiens USF2-human ENCAB000AMH DNA see document see document False 2011-10-29 ENCODE 2 ENCFF710NTS, ENCFF842LBP 500805246 ENCODE Processing Pipeline 40ce856c17bb52f2f14709ead76d422e https://www.encodeproject.org/files/ENCFF507QKZ/@@download/ENCFF507QKZ.bigWig hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF842IMI bigBed narrowPeak optimal idr thresholded peaks ENCSR000EHG ChIP-seq EFO:0002067 K562 cell line Homo sapiens USF2-human ENCAB000AMH DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF150VTD 164528 ENCODE Processing Pipeline 4a4bbe123e53bf88fe54308e81feb063 https://www.encodeproject.org/files/ENCFF842IMI/@@download/ENCFF842IMI.bigBed hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF497XRH bigWig signal p-value ENCSR000EHG ChIP-seq EFO:0002067 K562 cell line Homo sapiens USF2-human ENCAB000AMH DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF710NTS, ENCFF842LBP, ENCFF851ZZA 542170277 ENCODE Processing Pipeline 68f954f304a6a5f9baee2376d50982d3 https://www.encodeproject.org/files/ENCFF497XRH/@@download/ENCFF497XRH.bigWig hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF915ZPW bigWig fold change over control ENCSR000EHG ChIP-seq EFO:0002067 K562 cell line Homo sapiens USF2-human ENCAB000AMH DNA see document see document False 2011-10-29 ENCODE 2 ENCFF710NTS, ENCFF842LBP 332679640 ENCODE Processing Pipeline 231859b02955ae5db369bc5161122693 https://www.encodeproject.org/files/ENCFF915ZPW/@@download/ENCFF915ZPW.bigWig hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF129CHM bed narrowPeak peaks ENCSR000EHG ChIP-seq EFO:0002067 K562 cell line Homo sapiens USF2-human ENCAB000AMH DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF710NTS, ENCFF842LBP, ENCFF851ZZA 4868544 ENCODE Processing Pipeline 4e09e34754c699b6f4d5d0aa576ca27c https://www.encodeproject.org/files/ENCFF129CHM/@@download/ENCFF129CHM.bed.gz hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF174GFS bigBed narrowPeak peaks ENCSR000EHG ChIP-seq EFO:0002067 K562 cell line Homo sapiens USF2-human ENCAB000AMH DNA see document see document False 2011-10-29 ENCODE 1 ENCFF935ZZG 10537535 ENCODE Processing Pipeline 97d83769aaf7e028441dfaa78d10bdbf https://www.encodeproject.org/files/ENCFF174GFS/@@download/ENCFF174GFS.bigBed hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF605DSA bigWig fold change over control ENCSR000EHG ChIP-seq EFO:0002067 K562 cell line Homo sapiens USF2-human ENCAB000AMH DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF710NTS, ENCFF842LBP, ENCFF851ZZA 561236085 ENCODE Processing Pipeline ac3e8acd3cf2ed5c6c08fae2eebe9fc0 https://www.encodeproject.org/files/ENCFF605DSA/@@download/ENCFF605DSA.bigWig hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF352CCQ bed narrowPeak conservative idr thresholded peaks ENCSR000EHG ChIP-seq EFO:0002067 K562 cell line Homo sapiens USF2-human ENCAB000AMH DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF001TDO, ENCFF129CHM, ENCFF505EIB, ENCFF935ZZG 62769 ENCODE Processing Pipeline 9c8ce7fc9f3d07e1980ecdda9d348cfc https://www.encodeproject.org/files/ENCFF352CCQ/@@download/ENCFF352CCQ.bed.gz hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF935ZZG bed narrowPeak peaks ENCSR000EHG ChIP-seq EFO:0002067 K562 cell line Homo sapiens USF2-human ENCAB000AMH DNA see document see document False 2011-10-29 ENCODE 1 ENCFF710NTS, ENCFF851ZZA 4131199 ENCODE Processing Pipeline 6fc0d16772ba997c26d354f701fbefce https://www.encodeproject.org/files/ENCFF935ZZG/@@download/ENCFF935ZZG.bed.gz hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF505EIB bed narrowPeak peaks ENCSR000EHG ChIP-seq EFO:0002067 K562 cell line Homo sapiens USF2-human ENCAB000AMH DNA see document see document False 2011-10-29 ENCODE 2 ENCFF710NTS, ENCFF842LBP 4219487 ENCODE Processing Pipeline de5e49bbd51ef4840243072ad43be632 https://www.encodeproject.org/files/ENCFF505EIB/@@download/ENCFF505EIB.bed.gz hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF186PHB bigBed narrowPeak peaks ENCSR000EHG ChIP-seq EFO:0002067 K562 cell line Homo sapiens USF2-human ENCAB000AMH DNA see document see document False 2011-10-29 ENCODE 2 ENCFF505EIB 10576105 ENCODE Processing Pipeline ea8239fba5c70a6bfb03ef129497b2e7 https://www.encodeproject.org/files/ENCFF186PHB/@@download/ENCFF186PHB.bigBed hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF282LTR bigBed narrowPeak peaks ENCSR000EHG ChIP-seq EFO:0002067 K562 cell line Homo sapiens USF2-human ENCAB000AMH DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF129CHM 11187451 ENCODE Processing Pipeline 1c8c342569c7d8d0dafcf3ad00bdce85 https://www.encodeproject.org/files/ENCFF282LTR/@@download/ENCFF282LTR.bigBed hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF399ILC bigBed narrowPeak conservative idr thresholded peaks ENCSR000EHG ChIP-seq EFO:0002067 K562 cell line Homo sapiens USF2-human ENCAB000AMH DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF352CCQ 159737 ENCODE Processing Pipeline f19a65750d2e68f61aaf0f64885952bc https://www.encodeproject.org/files/ENCFF399ILC/@@download/ENCFF399ILC.bigBed hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF150VTD bed narrowPeak optimal idr thresholded peaks ENCSR000EHG ChIP-seq EFO:0002067 K562 cell line Homo sapiens USF2-human ENCAB000AMH DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF001TDO, ENCFF129CHM, ENCFF505EIB, ENCFF935ZZG 66396 ENCODE Processing Pipeline 374d6db908c4b58361da86e304486f3d https://www.encodeproject.org/files/ENCFF150VTD/@@download/ENCFF150VTD.bed.gz hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF336OYQ bam unfiltered alignments ENCSR695EQB ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF24-human ENCAB198YAJ DNA False 2017-01-27 ENCODE 2 100 ENCFF292TZE, ENCFF710ZBC, ENCFF807MUK 6182100726 ENCODE Processing Pipeline f2516641db7f8d63a71b1e2e8f3ed304 https://www.encodeproject.org/files/ENCFF336OYQ/@@download/ENCFF336OYQ.bam hg19 released antibody characterized with exemption missing control alignments ENCFF870QAR bam unfiltered alignments ENCSR695EQB ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF24-human ENCAB198YAJ DNA False 2017-01-27 ENCODE 1 100 ENCFF241YMF, ENCFF807MUK, ENCFF941CCE 6250949955 ENCODE Processing Pipeline 57fa5046da1a4856e2aa07f808cf6067 https://www.encodeproject.org/files/ENCFF870QAR/@@download/ENCFF870QAR.bam hg19 released antibody characterized with exemption missing control alignments ENCFF292TZE fastq reads ENCSR695EQB ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF24-human ENCAB198YAJ DNA False 2017-01-27 ENCODE 2 1 100 paired-ended 1 ENCFF710ZBC 2851410445 Michael Snyder, Stanford 726f8629e48ad4121b9c26c2216bea15 SRA:SRR6213715 https://www.encodeproject.org/files/ENCFF292TZE/@@download/ENCFF292TZE.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFD/ released antibody characterized with exemption missing control alignments ENCFF941CCE fastq reads ENCSR695EQB ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF24-human ENCAB198YAJ DNA False 2017-01-27 ENCODE 1 1 100 paired-ended 2 ENCFF241YMF 2967457883 Michael Snyder, Stanford e7abfc9782058ef076a9621c0b4b36a2 SRA:SRR6213714 https://www.encodeproject.org/files/ENCFF941CCE/@@download/ENCFF941CCE.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFH/ released antibody characterized with exemption missing control alignments ENCFF710ZBC fastq reads ENCSR695EQB ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF24-human ENCAB198YAJ DNA False 2017-01-27 ENCODE 2 1 100 paired-ended 2 ENCFF292TZE 2946203117 Michael Snyder, Stanford 428a513cc1755d6f804bc2560a1a3163 SRA:SRR6213715 https://www.encodeproject.org/files/ENCFF710ZBC/@@download/ENCFF710ZBC.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFA/ released antibody characterized with exemption missing control alignments ENCFF241YMF fastq reads ENCSR695EQB ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF24-human ENCAB198YAJ DNA False 2017-01-27 ENCODE 1 1 100 paired-ended 1 ENCFF941CCE 2879763975 Michael Snyder, Stanford 215f108525f0916531bdc40ed5a598c3 SRA:SRR6213714 https://www.encodeproject.org/files/ENCFF241YMF/@@download/ENCFF241YMF.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFF/ released antibody characterized with exemption missing control alignments ENCFF057NCM bam alignments ENCSR695EQB ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF24-human ENCAB198YAJ DNA False 2017-01-27 ENCODE 1 100 ENCFF241YMF, ENCFF807MUK, ENCFF941CCE 5191782993 ENCODE Processing Pipeline d01b9db2f5c7f3ac88bfb1bb963a25e4 https://www.encodeproject.org/files/ENCFF057NCM/@@download/ENCFF057NCM.bam hg19 released antibody characterized with exemption missing control alignments ENCFF891JGT bam alignments ENCSR695EQB ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF24-human ENCAB198YAJ DNA False 2017-01-27 ENCODE 2 100 ENCFF292TZE, ENCFF710ZBC, ENCFF807MUK 5227199260 ENCODE Processing Pipeline ae03cecee914c38b6f30ac5d62c65d72 https://www.encodeproject.org/files/ENCFF891JGT/@@download/ENCFF891JGT.bam hg19 released antibody characterized with exemption missing control alignments ENCFF967SMZ bigWig signal p-value ENCSR695EQB ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF24-human ENCAB198YAJ DNA False 2017-01-27 ENCODE 1 ENCFF057NCM, ENCFF581ZJL 1394459341 ENCODE Processing Pipeline ac45e4217d766828cf8e898acce4daec https://www.encodeproject.org/files/ENCFF967SMZ/@@download/ENCFF967SMZ.bigWig hg19 released antibody characterized with exemption missing control alignments ENCFF685CLD bigWig signal p-value ENCSR695EQB ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF24-human ENCAB198YAJ DNA False 2017-01-27 ENCODE 2 ENCFF051LWI, ENCFF891JGT 1157000515 ENCODE Processing Pipeline a56301c4e910281d02daeea1f028d2ec https://www.encodeproject.org/files/ENCFF685CLD/@@download/ENCFF685CLD.bigWig hg19 released antibody characterized with exemption missing control alignments ENCFF240ITM bigWig signal p-value ENCSR695EQB ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF24-human ENCAB198YAJ DNA False 2017-01-27 ENCODE 1, 2 ENCFF051LWI, ENCFF057NCM, ENCFF581ZJL, ENCFF891JGT 2094931298 ENCODE Processing Pipeline 08d64b0a81dd698894aa1de966bbd71c https://www.encodeproject.org/files/ENCFF240ITM/@@download/ENCFF240ITM.bigWig hg19 released antibody characterized with exemption missing control alignments ENCFF106HCG bigWig fold change over control ENCSR695EQB ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF24-human ENCAB198YAJ DNA False 2017-01-27 ENCODE 1 ENCFF057NCM, ENCFF581ZJL 1338024986 ENCODE Processing Pipeline c7f9e1b2aababd3af52809f1550d8ad8 https://www.encodeproject.org/files/ENCFF106HCG/@@download/ENCFF106HCG.bigWig hg19 released antibody characterized with exemption missing control alignments ENCFF311IFA bigWig fold change over control ENCSR695EQB ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF24-human ENCAB198YAJ DNA False 2017-01-27 ENCODE 2 ENCFF051LWI, ENCFF891JGT 1285172257 ENCODE Processing Pipeline 86b1d500c555b904c4485f8bb3cd335f https://www.encodeproject.org/files/ENCFF311IFA/@@download/ENCFF311IFA.bigWig hg19 released antibody characterized with exemption missing control alignments ENCFF595RNS bigWig fold change over control ENCSR695EQB ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF24-human ENCAB198YAJ DNA False 2017-01-27 ENCODE 1, 2 ENCFF051LWI, ENCFF057NCM, ENCFF581ZJL, ENCFF891JGT 2313270123 ENCODE Processing Pipeline a6afe5bb414d1e6daa8d80cd0a5a73f4 https://www.encodeproject.org/files/ENCFF595RNS/@@download/ENCFF595RNS.bigWig hg19 released antibody characterized with exemption missing control alignments ENCFF953ORJ bam unfiltered alignments ENCSR695EQB ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF24-human ENCAB198YAJ DNA False 2017-01-27 ENCODE 1 100 ENCFF241YMF, ENCFF643CGH, ENCFF941CCE 6258223667 ENCODE Processing Pipeline 2ddfce3a9c393be44e3ac763d4c4a053 https://www.encodeproject.org/files/ENCFF953ORJ/@@download/ENCFF953ORJ.bam GRCh38 released antibody characterized with exemption missing control alignments ENCFF998BKX bam unfiltered alignments ENCSR695EQB ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF24-human ENCAB198YAJ DNA False 2017-01-27 ENCODE 2 100 ENCFF292TZE, ENCFF643CGH, ENCFF710ZBC 6187852956 ENCODE Processing Pipeline 68aabf807e5c9e1e0ddcd78e9515c4d6 https://www.encodeproject.org/files/ENCFF998BKX/@@download/ENCFF998BKX.bam GRCh38 released antibody characterized with exemption missing control alignments ENCFF657TZQ bam alignments ENCSR695EQB ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF24-human ENCAB198YAJ DNA False 2017-01-27 ENCODE 1 100 ENCFF241YMF, ENCFF643CGH, ENCFF941CCE 5193671450 ENCODE Processing Pipeline 6dd331011c677fe339958c39192cafbd https://www.encodeproject.org/files/ENCFF657TZQ/@@download/ENCFF657TZQ.bam GRCh38 released antibody characterized with exemption missing control alignments ENCFF738AVH bam alignments ENCSR695EQB ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF24-human ENCAB198YAJ DNA False 2017-01-27 ENCODE 2 100 ENCFF292TZE, ENCFF643CGH, ENCFF710ZBC 5228373859 ENCODE Processing Pipeline c1b8bc6a8900399656dc422f69f46fa7 https://www.encodeproject.org/files/ENCFF738AVH/@@download/ENCFF738AVH.bam GRCh38 released antibody characterized with exemption missing control alignments ENCFF357BAQ bigWig signal p-value ENCSR695EQB ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF24-human ENCAB198YAJ DNA False 2017-01-27 ENCODE 1 ENCFF657TZQ 1094999938 ENCODE Processing Pipeline 8b5489078556be21471e043fcf1a5d7e https://www.encodeproject.org/files/ENCFF357BAQ/@@download/ENCFF357BAQ.bigWig GRCh38 released antibody characterized with exemption missing control alignments ENCFF344OSQ bigWig signal p-value ENCSR695EQB ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF24-human ENCAB198YAJ DNA False 2017-01-27 ENCODE 2 ENCFF738AVH 1102477987 ENCODE Processing Pipeline b9a032ae37a97ac5b3eda64ef3327774 https://www.encodeproject.org/files/ENCFF344OSQ/@@download/ENCFF344OSQ.bigWig GRCh38 released antibody characterized with exemption missing control alignments ENCFF205MGT bigWig signal p-value ENCSR695EQB ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF24-human ENCAB198YAJ DNA False 2017-01-27 ENCODE 1, 2 ENCFF657TZQ, ENCFF738AVH 1807845882 ENCODE Processing Pipeline 9cbdb034f531cc8c7543cdf613dd22d7 https://www.encodeproject.org/files/ENCFF205MGT/@@download/ENCFF205MGT.bigWig GRCh38 released antibody characterized with exemption missing control alignments ENCFF356IMJ bigWig fold change over control ENCSR695EQB ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF24-human ENCAB198YAJ DNA False 2017-01-27 ENCODE 1 ENCFF657TZQ 1352405371 ENCODE Processing Pipeline dfc3d41d30d184ea3ee60521bf7707a2 https://www.encodeproject.org/files/ENCFF356IMJ/@@download/ENCFF356IMJ.bigWig GRCh38 released antibody characterized with exemption missing control alignments ENCFF619PKO bigWig fold change over control ENCSR695EQB ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF24-human ENCAB198YAJ DNA False 2017-01-27 ENCODE 2 ENCFF738AVH 1286110272 ENCODE Processing Pipeline 4cecd2ea20d1115cf1bbee50ea60fb17 https://www.encodeproject.org/files/ENCFF619PKO/@@download/ENCFF619PKO.bigWig GRCh38 released antibody characterized with exemption missing control alignments ENCFF026MQA bigWig fold change over control ENCSR695EQB ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF24-human ENCAB198YAJ DNA False 2017-01-27 ENCODE 1, 2 ENCFF657TZQ, ENCFF738AVH 2315814803 ENCODE Processing Pipeline 4397fc36a54c366cbac286e90acb2636 https://www.encodeproject.org/files/ENCFF026MQA/@@download/ENCFF026MQA.bigWig GRCh38 released antibody characterized with exemption missing control alignments ENCFF615KWQ bed narrowPeak peaks ENCSR695EQB ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF24-human ENCAB198YAJ DNA False 2017-01-27 ENCODE 1 ENCFF657TZQ 7092343 ENCODE Processing Pipeline 165ccb4d4554a0ef081544a8b208531d https://www.encodeproject.org/files/ENCFF615KWQ/@@download/ENCFF615KWQ.bed.gz GRCh38 released antibody characterized with exemption missing control alignments ENCFF567GWM bed narrowPeak peaks ENCSR695EQB ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF24-human ENCAB198YAJ DNA False 2017-01-27 ENCODE 2 ENCFF738AVH 7173717 ENCODE Processing Pipeline 4e4e39d3eb0eeab7e7cdca7904d8be90 https://www.encodeproject.org/files/ENCFF567GWM/@@download/ENCFF567GWM.bed.gz GRCh38 released antibody characterized with exemption missing control alignments ENCFF532BAK bed narrowPeak peaks ENCSR695EQB ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF24-human ENCAB198YAJ DNA False 2017-01-27 ENCODE 1, 2 ENCFF657TZQ, ENCFF738AVH 7279285 ENCODE Processing Pipeline 76b74493e2ff9ccc4724263d0fff29de https://www.encodeproject.org/files/ENCFF532BAK/@@download/ENCFF532BAK.bed.gz GRCh38 released antibody characterized with exemption missing control alignments ENCFF036PVX bigBed narrowPeak peaks ENCSR695EQB ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF24-human ENCAB198YAJ DNA False 2017-01-27 ENCODE 1 ENCFF615KWQ 13193442 ENCODE Processing Pipeline 8b1704756d88c5a97b7c9cfd41b0e15c https://www.encodeproject.org/files/ENCFF036PVX/@@download/ENCFF036PVX.bigBed GRCh38 released antibody characterized with exemption missing control alignments ENCFF505OTR bigBed narrowPeak peaks ENCSR695EQB ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF24-human ENCAB198YAJ DNA False 2017-01-27 ENCODE 2 ENCFF567GWM 12941971 ENCODE Processing Pipeline 53b54c7e9d9aca62f519f16604b0865e https://www.encodeproject.org/files/ENCFF505OTR/@@download/ENCFF505OTR.bigBed GRCh38 released antibody characterized with exemption missing control alignments ENCFF546XMC bigBed narrowPeak peaks ENCSR695EQB ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF24-human ENCAB198YAJ DNA False 2017-01-27 ENCODE 1, 2 ENCFF532BAK 12991105 ENCODE Processing Pipeline b470441470e4b405ef77afef6aae7305 https://www.encodeproject.org/files/ENCFF546XMC/@@download/ENCFF546XMC.bigBed GRCh38 released antibody characterized with exemption missing control alignments ENCFF535ZFM bed narrowPeak conservative idr thresholded peaks ENCSR695EQB ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF24-human ENCAB198YAJ DNA False 2017-01-27 ENCODE 1, 2 ENCFF419RSJ, ENCFF532BAK, ENCFF567GWM, ENCFF615KWQ 416129 ENCODE Processing Pipeline 7793c91cafb20c8e4171d421c299d5b2 https://www.encodeproject.org/files/ENCFF535ZFM/@@download/ENCFF535ZFM.bed.gz GRCh38 released antibody characterized with exemption missing control alignments ENCFF044QPT bigBed narrowPeak conservative idr thresholded peaks ENCSR695EQB ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF24-human ENCAB198YAJ DNA False 2017-01-27 ENCODE 1, 2 ENCFF535ZFM 862644 ENCODE Processing Pipeline cf0bce3b4ea6017f3e44094960ffbf60 https://www.encodeproject.org/files/ENCFF044QPT/@@download/ENCFF044QPT.bigBed GRCh38 released antibody characterized with exemption missing control alignments ENCFF260CBQ bed narrowPeak optimal idr thresholded peaks ENCSR695EQB ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF24-human ENCAB198YAJ DNA False 2017-01-27 ENCODE 1, 2 ENCFF419RSJ, ENCFF532BAK, ENCFF567GWM, ENCFF615KWQ 520138 ENCODE Processing Pipeline 5a37d6db72e31e29e52b6c2b83618f68 https://www.encodeproject.org/files/ENCFF260CBQ/@@download/ENCFF260CBQ.bed.gz GRCh38 released antibody characterized with exemption missing control alignments ENCFF431HSM bigBed narrowPeak optimal idr thresholded peaks ENCSR695EQB ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF24-human ENCAB198YAJ DNA False 2017-01-27 ENCODE 1, 2 ENCFF260CBQ 1020560 ENCODE Processing Pipeline 21169f43dec315137d3ea8224bbcf5d1 https://www.encodeproject.org/files/ENCFF431HSM/@@download/ENCFF431HSM.bigBed GRCh38 released antibody characterized with exemption missing control alignments ENCFF560GUE bigBed narrowPeak peaks ENCSR695EQB ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF24-human ENCAB198YAJ DNA False 2017-01-27 ENCODE 2 ENCFF309SZA 12925835 ENCODE Processing Pipeline 8eb26b8c7126b3ca88788508fe3350d3 https://www.encodeproject.org/files/ENCFF560GUE/@@download/ENCFF560GUE.bigBed hg19 released antibody characterized with exemption missing control alignments ENCFF309SZA bed narrowPeak peaks ENCSR695EQB ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF24-human ENCAB198YAJ DNA False 2017-01-27 ENCODE 2 ENCFF051LWI, ENCFF891JGT 7176855 ENCODE Processing Pipeline 49d352536c4577a2bfc11622141afab3 https://www.encodeproject.org/files/ENCFF309SZA/@@download/ENCFF309SZA.bed.gz hg19 released antibody characterized with exemption missing control alignments ENCFF956UQS bigBed narrowPeak peaks ENCSR695EQB ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF24-human ENCAB198YAJ DNA False 2017-01-27 ENCODE 1, 2 ENCFF924XOY 13005926 ENCODE Processing Pipeline e532ceb7efcae02dfc5fa05869a8f825 https://www.encodeproject.org/files/ENCFF956UQS/@@download/ENCFF956UQS.bigBed hg19 released antibody characterized with exemption missing control alignments ENCFF576GFA bigBed narrowPeak optimal idr thresholded peaks ENCSR695EQB ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF24-human ENCAB198YAJ DNA False 2017-01-27 ENCODE 1, 2 ENCFF340PPI 1031175 ENCODE Processing Pipeline 355a21ad1e44f4bca74ee1597d38044c https://www.encodeproject.org/files/ENCFF576GFA/@@download/ENCFF576GFA.bigBed hg19 released antibody characterized with exemption missing control alignments ENCFF720BVJ bed narrowPeak peaks ENCSR695EQB ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF24-human ENCAB198YAJ DNA False 2017-01-27 ENCODE 1 ENCFF057NCM, ENCFF581ZJL 7096882 ENCODE Processing Pipeline 5642da1c0113cedbfd494e26d8fe70cc https://www.encodeproject.org/files/ENCFF720BVJ/@@download/ENCFF720BVJ.bed.gz hg19 released antibody characterized with exemption missing control alignments ENCFF924XOY bed narrowPeak peaks ENCSR695EQB ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF24-human ENCAB198YAJ DNA False 2017-01-27 ENCODE 1, 2 ENCFF051LWI, ENCFF057NCM, ENCFF581ZJL, ENCFF891JGT 7301964 ENCODE Processing Pipeline 58942973d3f4e298ec657e05dafe9706 https://www.encodeproject.org/files/ENCFF924XOY/@@download/ENCFF924XOY.bed.gz hg19 released antibody characterized with exemption missing control alignments ENCFF214JKY bigBed narrowPeak peaks ENCSR695EQB ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF24-human ENCAB198YAJ DNA False 2017-01-27 ENCODE 1 ENCFF720BVJ 13188359 ENCODE Processing Pipeline 40e08b08849b6c8473361148974a4256 https://www.encodeproject.org/files/ENCFF214JKY/@@download/ENCFF214JKY.bigBed hg19 released antibody characterized with exemption missing control alignments ENCFF687PGE bigBed narrowPeak conservative idr thresholded peaks ENCSR695EQB ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF24-human ENCAB198YAJ DNA False 2017-01-27 ENCODE 1, 2 ENCFF016XTQ 871501 ENCODE Processing Pipeline ecd5f214aee13a4f51a0d02a76cad1a0 https://www.encodeproject.org/files/ENCFF687PGE/@@download/ENCFF687PGE.bigBed hg19 released antibody characterized with exemption missing control alignments ENCFF016XTQ bed narrowPeak conservative idr thresholded peaks ENCSR695EQB ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF24-human ENCAB198YAJ DNA False 2017-01-27 ENCODE 1, 2 ENCFF001TDO, ENCFF309SZA, ENCFF720BVJ, ENCFF924XOY 424887 ENCODE Processing Pipeline b0a55b9cab5d1aecab294b47f21dbf87 https://www.encodeproject.org/files/ENCFF016XTQ/@@download/ENCFF016XTQ.bed.gz hg19 released antibody characterized with exemption missing control alignments ENCFF340PPI bed narrowPeak optimal idr thresholded peaks ENCSR695EQB ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF24-human ENCAB198YAJ DNA False 2017-01-27 ENCODE 1, 2 ENCFF001TDO, ENCFF309SZA, ENCFF720BVJ, ENCFF924XOY 530134 ENCODE Processing Pipeline 9a398398d2c9211d4896d977bf907b72 https://www.encodeproject.org/files/ENCFF340PPI/@@download/ENCFF340PPI.bed.gz hg19 released antibody characterized with exemption missing control alignments ENCFF439UUP fastq reads ENCSR571BUF ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARHGAP35-human ENCAB567JVG DNA False 2018-01-26 ENCODE 1 1 100 paired-ended 1 ENCFF333JPS 3819797508 Michael Snyder, Stanford a81d09f43e49439053b8c697876d34f3 https://www.encodeproject.org/files/ENCFF439UUP/@@download/ENCFF439UUP.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFF/ released borderline replicate concordance experiment not submitted to GEO partially characterized antibody ENCFF129HKI fastq reads ENCSR571BUF ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARHGAP35-human ENCAB567JVG DNA False 2018-01-26 ENCODE 2 1 100 paired-ended 2 ENCFF111ZWV 3325444853 Michael Snyder, Stanford 6d6c496956fee94dcd4f7beedd7fc9d6 https://www.encodeproject.org/files/ENCFF129HKI/@@download/ENCFF129HKI.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFA/ released borderline replicate concordance experiment not submitted to GEO partially characterized antibody ENCFF333JPS fastq reads ENCSR571BUF ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARHGAP35-human ENCAB567JVG DNA False 2018-01-26 ENCODE 1 1 100 paired-ended 2 ENCFF439UUP 3815969030 Michael Snyder, Stanford 08743702baad3b5c3b017091a7aa48a5 https://www.encodeproject.org/files/ENCFF333JPS/@@download/ENCFF333JPS.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFH/ released borderline replicate concordance experiment not submitted to GEO partially characterized antibody ENCFF111ZWV fastq reads ENCSR571BUF ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARHGAP35-human ENCAB567JVG DNA False 2018-01-26 ENCODE 2 1 100 paired-ended 1 ENCFF129HKI 3330712064 Michael Snyder, Stanford cf4375d21f432837ce8afb7b8870d49b https://www.encodeproject.org/files/ENCFF111ZWV/@@download/ENCFF111ZWV.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFD/ released borderline replicate concordance experiment not submitted to GEO partially characterized antibody ENCFF212FEG bam unfiltered alignments ENCSR571BUF ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARHGAP35-human ENCAB567JVG DNA False 2018-01-26 ENCODE 2 100 ENCFF111ZWV, ENCFF129HKI, ENCFF643CGH 7117354386 ENCODE Processing Pipeline 27b92de21c138ceb144ad7002812a7ee https://www.encodeproject.org/files/ENCFF212FEG/@@download/ENCFF212FEG.bam GRCh38 released borderline replicate concordance experiment not submitted to GEO partially characterized antibody ENCFF200RFV bam unfiltered alignments ENCSR571BUF ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARHGAP35-human ENCAB567JVG DNA False 2018-01-26 ENCODE 1 100 ENCFF333JPS, ENCFF439UUP, ENCFF643CGH 8135826390 ENCODE Processing Pipeline 43ac2910dcc252fd825be37d8cd98cc1 https://www.encodeproject.org/files/ENCFF200RFV/@@download/ENCFF200RFV.bam GRCh38 released borderline replicate concordance experiment not submitted to GEO partially characterized antibody ENCFF887LKI bam alignments ENCSR571BUF ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARHGAP35-human ENCAB567JVG DNA False 2018-01-26 ENCODE 1 100 ENCFF333JPS, ENCFF439UUP, ENCFF643CGH 6468266480 ENCODE Processing Pipeline 93a366d897613f692bc721ed801096e8 https://www.encodeproject.org/files/ENCFF887LKI/@@download/ENCFF887LKI.bam GRCh38 released borderline replicate concordance experiment not submitted to GEO partially characterized antibody ENCFF627XYQ bam alignments ENCSR571BUF ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARHGAP35-human ENCAB567JVG DNA False 2018-01-26 ENCODE 2 100 ENCFF111ZWV, ENCFF129HKI, ENCFF643CGH 5608798596 ENCODE Processing Pipeline 9566c7fe4b68b2146f5b2f98dd33ac84 https://www.encodeproject.org/files/ENCFF627XYQ/@@download/ENCFF627XYQ.bam GRCh38 released borderline replicate concordance experiment not submitted to GEO partially characterized antibody ENCFF021XKN bigWig signal p-value ENCSR571BUF ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARHGAP35-human ENCAB567JVG DNA False 2018-01-26 ENCODE 1, 2 ENCFF227IZS, ENCFF627XYQ, ENCFF887LKI, ENCFF910IKB 2007322243 ENCODE Processing Pipeline 9fd06a4eaef50b779b52d67a3bef3b2d https://www.encodeproject.org/files/ENCFF021XKN/@@download/ENCFF021XKN.bigWig GRCh38 released borderline replicate concordance experiment not submitted to GEO partially characterized antibody ENCFF615BBI bigWig signal p-value ENCSR571BUF ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARHGAP35-human ENCAB567JVG DNA False 2018-01-26 ENCODE 2 ENCFF227IZS, ENCFF627XYQ 1016588769 ENCODE Processing Pipeline d5dbb57b312901c62e02a2258967241e https://www.encodeproject.org/files/ENCFF615BBI/@@download/ENCFF615BBI.bigWig GRCh38 released borderline replicate concordance experiment not submitted to GEO partially characterized antibody ENCFF382TOZ bed narrowPeak peaks ENCSR571BUF ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARHGAP35-human ENCAB567JVG DNA False 2018-01-26 ENCODE 1, 2 ENCFF227IZS, ENCFF627XYQ, ENCFF887LKI, ENCFF910IKB 7176078 ENCODE Processing Pipeline 0c3a9fefa9ebb41e95c1c273889e085b https://www.encodeproject.org/files/ENCFF382TOZ/@@download/ENCFF382TOZ.bed.gz GRCh38 released borderline replicate concordance experiment not submitted to GEO partially characterized antibody ENCFF104IIJ bed narrowPeak conservative idr thresholded peaks ENCSR571BUF ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARHGAP35-human ENCAB567JVG DNA False 2018-01-26 ENCODE 1, 2 ENCFF196OXK, ENCFF310KQI, ENCFF382TOZ, ENCFF419RSJ 46938 ENCODE Processing Pipeline bed2e6d2b8ed91f0cb1135192c2a1906 https://www.encodeproject.org/files/ENCFF104IIJ/@@download/ENCFF104IIJ.bed.gz GRCh38 released borderline replicate concordance experiment not submitted to GEO partially characterized antibody ENCFF089PKE bed narrowPeak optimal idr thresholded peaks ENCSR571BUF ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARHGAP35-human ENCAB567JVG DNA False 2018-01-26 ENCODE 1, 2 ENCFF196OXK, ENCFF310KQI, ENCFF382TOZ, ENCFF419RSJ 94464 ENCODE Processing Pipeline 260a4d6538d8c0d709bb34946b10ff24 https://www.encodeproject.org/files/ENCFF089PKE/@@download/ENCFF089PKE.bed.gz GRCh38 released borderline replicate concordance experiment not submitted to GEO partially characterized antibody ENCFF787DUB bigBed narrowPeak optimal idr thresholded peaks ENCSR571BUF ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARHGAP35-human ENCAB567JVG DNA False 2018-01-26 ENCODE 1, 2 ENCFF089PKE 233312 ENCODE Processing Pipeline e6194eaef378e43ae8c3b4957cf2b122 https://www.encodeproject.org/files/ENCFF787DUB/@@download/ENCFF787DUB.bigBed GRCh38 released borderline replicate concordance experiment not submitted to GEO partially characterized antibody ENCFF918KNN bigWig fold change over control ENCSR571BUF ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARHGAP35-human ENCAB567JVG DNA False 2018-01-26 ENCODE 1 ENCFF887LKI, ENCFF910IKB 1451462365 ENCODE Processing Pipeline e4d32d69418a1e0a868647df731f759e https://www.encodeproject.org/files/ENCFF918KNN/@@download/ENCFF918KNN.bigWig GRCh38 released borderline replicate concordance experiment not submitted to GEO partially characterized antibody ENCFF955KWH bigWig fold change over control ENCSR571BUF ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARHGAP35-human ENCAB567JVG DNA False 2018-01-26 ENCODE 1, 2 ENCFF227IZS, ENCFF627XYQ, ENCFF887LKI, ENCFF910IKB 2404506512 ENCODE Processing Pipeline a1630bea677535b8beb1869e05107d5c https://www.encodeproject.org/files/ENCFF955KWH/@@download/ENCFF955KWH.bigWig GRCh38 released borderline replicate concordance experiment not submitted to GEO partially characterized antibody ENCFF310KQI bed narrowPeak peaks ENCSR571BUF ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARHGAP35-human ENCAB567JVG DNA False 2018-01-26 ENCODE 1 ENCFF887LKI, ENCFF910IKB 6431825 ENCODE Processing Pipeline 1822238bbbb4660bc246cc5062441192 https://www.encodeproject.org/files/ENCFF310KQI/@@download/ENCFF310KQI.bed.gz GRCh38 released borderline replicate concordance experiment not submitted to GEO partially characterized antibody ENCFF495GMF bigBed narrowPeak peaks ENCSR571BUF ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARHGAP35-human ENCAB567JVG DNA False 2018-01-26 ENCODE 1, 2 ENCFF382TOZ 11039697 ENCODE Processing Pipeline 22b2644cb2b7d7697e3d6229f2de3b33 https://www.encodeproject.org/files/ENCFF495GMF/@@download/ENCFF495GMF.bigBed GRCh38 released borderline replicate concordance experiment not submitted to GEO partially characterized antibody ENCFF617XSW bigWig signal p-value ENCSR571BUF ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARHGAP35-human ENCAB567JVG DNA False 2018-01-26 ENCODE 1 ENCFF887LKI, ENCFF910IKB 1343862936 ENCODE Processing Pipeline ae0010cdb59b7560c0a8f786ca57b5c9 https://www.encodeproject.org/files/ENCFF617XSW/@@download/ENCFF617XSW.bigWig GRCh38 released borderline replicate concordance experiment not submitted to GEO partially characterized antibody ENCFF925ODO bigWig fold change over control ENCSR571BUF ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARHGAP35-human ENCAB567JVG DNA False 2018-01-26 ENCODE 2 ENCFF227IZS, ENCFF627XYQ 1309221638 ENCODE Processing Pipeline 88aeb90ef63cdf10b98dff6dc998606a https://www.encodeproject.org/files/ENCFF925ODO/@@download/ENCFF925ODO.bigWig GRCh38 released borderline replicate concordance experiment not submitted to GEO partially characterized antibody ENCFF196OXK bed narrowPeak peaks ENCSR571BUF ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARHGAP35-human ENCAB567JVG DNA False 2018-01-26 ENCODE 2 ENCFF227IZS, ENCFF627XYQ 6497344 ENCODE Processing Pipeline 84a0c91d208bd8ea36ca0c42c9dd3e09 https://www.encodeproject.org/files/ENCFF196OXK/@@download/ENCFF196OXK.bed.gz GRCh38 released borderline replicate concordance experiment not submitted to GEO partially characterized antibody ENCFF091XYI bigBed narrowPeak peaks ENCSR571BUF ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARHGAP35-human ENCAB567JVG DNA False 2018-01-26 ENCODE 2 ENCFF196OXK 11055818 ENCODE Processing Pipeline 6c7bbb8c8a398d5faaea5b6a075d13ec https://www.encodeproject.org/files/ENCFF091XYI/@@download/ENCFF091XYI.bigBed GRCh38 released borderline replicate concordance experiment not submitted to GEO partially characterized antibody ENCFF347QYW bigBed narrowPeak peaks ENCSR571BUF ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARHGAP35-human ENCAB567JVG DNA False 2018-01-26 ENCODE 1 ENCFF310KQI 11091941 ENCODE Processing Pipeline c6c907be1fa5efd04b24d81bc6d7c1db https://www.encodeproject.org/files/ENCFF347QYW/@@download/ENCFF347QYW.bigBed GRCh38 released borderline replicate concordance experiment not submitted to GEO partially characterized antibody ENCFF245JYA bigBed narrowPeak conservative idr thresholded peaks ENCSR571BUF ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARHGAP35-human ENCAB567JVG DNA False 2018-01-26 ENCODE 1, 2 ENCFF104IIJ 132868 ENCODE Processing Pipeline b35f74df4f4ecc8a7cffff88ccf94411 https://www.encodeproject.org/files/ENCFF245JYA/@@download/ENCFF245JYA.bigBed GRCh38 released borderline replicate concordance experiment not submitted to GEO partially characterized antibody ENCFF879SVY bam unfiltered alignments ENCSR571BUF ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARHGAP35-human ENCAB567JVG DNA False 2018-01-26 ENCODE 2 100 ENCFF111ZWV, ENCFF129HKI, ENCFF807MUK 7112595337 ENCODE Processing Pipeline e82f847f16ce4a6dd2755e613a42ccfc https://www.encodeproject.org/files/ENCFF879SVY/@@download/ENCFF879SVY.bam hg19 released borderline replicate concordance experiment not submitted to GEO partially characterized antibody ENCFF931LAW bam unfiltered alignments ENCSR571BUF ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARHGAP35-human ENCAB567JVG DNA False 2018-01-26 ENCODE 1 100 ENCFF333JPS, ENCFF439UUP, ENCFF807MUK 8129305727 ENCODE Processing Pipeline d64e84610ac4df1591e6751db84a2250 https://www.encodeproject.org/files/ENCFF931LAW/@@download/ENCFF931LAW.bam hg19 released borderline replicate concordance experiment not submitted to GEO partially characterized antibody ENCFF185TBI bam alignments ENCSR571BUF ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARHGAP35-human ENCAB567JVG DNA False 2018-01-26 ENCODE 2 100 ENCFF111ZWV, ENCFF129HKI, ENCFF807MUK 5605651361 ENCODE Processing Pipeline c7656835c6f5e9c989a5b0d3b79902e9 https://www.encodeproject.org/files/ENCFF185TBI/@@download/ENCFF185TBI.bam hg19 released borderline replicate concordance experiment not submitted to GEO partially characterized antibody ENCFF376JWD bam alignments ENCSR571BUF ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARHGAP35-human ENCAB567JVG DNA False 2018-01-26 ENCODE 1 100 ENCFF333JPS, ENCFF439UUP, ENCFF807MUK 6462056624 ENCODE Processing Pipeline de94b48934a52e6c2df13455d839d28b https://www.encodeproject.org/files/ENCFF376JWD/@@download/ENCFF376JWD.bam hg19 released borderline replicate concordance experiment not submitted to GEO partially characterized antibody ENCFF537FAL bigWig signal p-value ENCSR571BUF ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARHGAP35-human ENCAB567JVG DNA False 2018-01-26 ENCODE 1 ENCFF376JWD, ENCFF581ZJL 1395476374 ENCODE Processing Pipeline 9242eb2e98fd7db5da6f7495ab03584f https://www.encodeproject.org/files/ENCFF537FAL/@@download/ENCFF537FAL.bigWig hg19 released borderline replicate concordance experiment not submitted to GEO partially characterized antibody ENCFF012IIY bigWig signal p-value ENCSR571BUF ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARHGAP35-human ENCAB567JVG DNA False 2018-01-26 ENCODE 2 ENCFF051LWI, ENCFF185TBI 1201892488 ENCODE Processing Pipeline 221257424266d38a3999d90cfd822bf5 https://www.encodeproject.org/files/ENCFF012IIY/@@download/ENCFF012IIY.bigWig hg19 released borderline replicate concordance experiment not submitted to GEO partially characterized antibody ENCFF817QIX bigWig fold change over control ENCSR571BUF ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARHGAP35-human ENCAB567JVG DNA False 2018-01-26 ENCODE 1 ENCFF376JWD, ENCFF581ZJL 1448532717 ENCODE Processing Pipeline ec7ba24dfbd3bfb7693867d62ba3fa6c https://www.encodeproject.org/files/ENCFF817QIX/@@download/ENCFF817QIX.bigWig hg19 released borderline replicate concordance experiment not submitted to GEO partially characterized antibody ENCFF888ENF bigWig fold change over control ENCSR571BUF ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARHGAP35-human ENCAB567JVG DNA False 2018-01-26 ENCODE 2 ENCFF051LWI, ENCFF185TBI 1319574030 ENCODE Processing Pipeline a5b8f62afa650b3ef42de4e5e88b10d4 https://www.encodeproject.org/files/ENCFF888ENF/@@download/ENCFF888ENF.bigWig hg19 released borderline replicate concordance experiment not submitted to GEO partially characterized antibody ENCFF796PJX bigWig signal p-value ENCSR571BUF ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARHGAP35-human ENCAB567JVG DNA False 2018-01-26 ENCODE 1, 2 ENCFF051LWI, ENCFF185TBI, ENCFF376JWD, ENCFF581ZJL 2285386805 ENCODE Processing Pipeline 8d98e8bb2ae870cc07fd15e649aac6c4 https://www.encodeproject.org/files/ENCFF796PJX/@@download/ENCFF796PJX.bigWig hg19 released borderline replicate concordance experiment not submitted to GEO partially characterized antibody ENCFF113AKA bed narrowPeak peaks ENCSR571BUF ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARHGAP35-human ENCAB567JVG DNA False 2018-01-26 ENCODE 2 ENCFF051LWI, ENCFF185TBI 6495886 ENCODE Processing Pipeline 7494f70453ea5f93629feef228a66aed https://www.encodeproject.org/files/ENCFF113AKA/@@download/ENCFF113AKA.bed.gz hg19 released borderline replicate concordance experiment not submitted to GEO partially characterized antibody ENCFF839UNU bigBed narrowPeak peaks ENCSR571BUF ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARHGAP35-human ENCAB567JVG DNA False 2018-01-26 ENCODE 2 ENCFF113AKA 11040641 ENCODE Processing Pipeline 18fd67e2f4ff7d17155a268accdacaac https://www.encodeproject.org/files/ENCFF839UNU/@@download/ENCFF839UNU.bigBed hg19 released borderline replicate concordance experiment not submitted to GEO partially characterized antibody ENCFF565ONA bed narrowPeak peaks ENCSR571BUF ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARHGAP35-human ENCAB567JVG DNA False 2018-01-26 ENCODE 1 ENCFF376JWD, ENCFF581ZJL 6489843 ENCODE Processing Pipeline 37411dc101264ed436539b6d7e933bd5 https://www.encodeproject.org/files/ENCFF565ONA/@@download/ENCFF565ONA.bed.gz hg19 released borderline replicate concordance experiment not submitted to GEO partially characterized antibody ENCFF205KOI bigBed narrowPeak conservative idr thresholded peaks ENCSR571BUF ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARHGAP35-human ENCAB567JVG DNA False 2018-01-26 ENCODE 1, 2 ENCFF991AML 155844 ENCODE Processing Pipeline ab36874f434416900389566875b205c7 https://www.encodeproject.org/files/ENCFF205KOI/@@download/ENCFF205KOI.bigBed hg19 released borderline replicate concordance experiment not submitted to GEO partially characterized antibody ENCFF866PWA bigBed narrowPeak peaks ENCSR571BUF ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARHGAP35-human ENCAB567JVG DNA False 2018-01-26 ENCODE 1, 2 ENCFF287JMK 11025003 ENCODE Processing Pipeline b2b06d1789503e505a3fa044f80685da https://www.encodeproject.org/files/ENCFF866PWA/@@download/ENCFF866PWA.bigBed hg19 released borderline replicate concordance experiment not submitted to GEO partially characterized antibody ENCFF694WYQ bigWig fold change over control ENCSR571BUF ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARHGAP35-human ENCAB567JVG DNA False 2018-01-26 ENCODE 1, 2 ENCFF051LWI, ENCFF185TBI, ENCFF376JWD, ENCFF581ZJL 2402517284 ENCODE Processing Pipeline 14631ef99c8682941178fdec067b90b9 https://www.encodeproject.org/files/ENCFF694WYQ/@@download/ENCFF694WYQ.bigWig hg19 released borderline replicate concordance experiment not submitted to GEO partially characterized antibody ENCFF104TZZ bigBed narrowPeak peaks ENCSR571BUF ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARHGAP35-human ENCAB567JVG DNA False 2018-01-26 ENCODE 1 ENCFF565ONA 11084462 ENCODE Processing Pipeline da65234adff2cef16758a9462a7c8756 https://www.encodeproject.org/files/ENCFF104TZZ/@@download/ENCFF104TZZ.bigBed hg19 released borderline replicate concordance experiment not submitted to GEO partially characterized antibody ENCFF010MMQ bed narrowPeak optimal idr thresholded peaks ENCSR571BUF ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARHGAP35-human ENCAB567JVG DNA False 2018-01-26 ENCODE 1, 2 ENCFF001TDO, ENCFF113AKA, ENCFF287JMK, ENCFF565ONA 95573 ENCODE Processing Pipeline c4d9d80170982a17ce764c0984b48c45 https://www.encodeproject.org/files/ENCFF010MMQ/@@download/ENCFF010MMQ.bed.gz hg19 released borderline replicate concordance experiment not submitted to GEO partially characterized antibody ENCFF287JMK bed narrowPeak peaks ENCSR571BUF ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARHGAP35-human ENCAB567JVG DNA False 2018-01-26 ENCODE 1, 2 ENCFF051LWI, ENCFF185TBI, ENCFF376JWD, ENCFF581ZJL 7170533 ENCODE Processing Pipeline da87553a0506efb3dbf344c8ab771324 https://www.encodeproject.org/files/ENCFF287JMK/@@download/ENCFF287JMK.bed.gz hg19 released borderline replicate concordance experiment not submitted to GEO partially characterized antibody ENCFF991AML bed narrowPeak conservative idr thresholded peaks ENCSR571BUF ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARHGAP35-human ENCAB567JVG DNA False 2018-01-26 ENCODE 1, 2 ENCFF001TDO, ENCFF113AKA, ENCFF287JMK, ENCFF565ONA 47611 ENCODE Processing Pipeline 04d109daf5f78b134fa8b736352ef20d https://www.encodeproject.org/files/ENCFF991AML/@@download/ENCFF991AML.bed.gz hg19 released borderline replicate concordance experiment not submitted to GEO partially characterized antibody ENCFF967UPX bigBed narrowPeak optimal idr thresholded peaks ENCSR571BUF ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARHGAP35-human ENCAB567JVG DNA False 2018-01-26 ENCODE 1, 2 ENCFF010MMQ 232730 ENCODE Processing Pipeline 7bd3d84e43e5757c97e871b47ce88481 https://www.encodeproject.org/files/ENCFF967UPX/@@download/ENCFF967UPX.bigBed hg19 released borderline replicate concordance experiment not submitted to GEO partially characterized antibody ENCFF097RQE fastq reads ENCSR415TXN ChIP-seq EFO:0002067 K562 cell line Homo sapiens NONO-human ENCAB097MPS DNA SDS formaldehyde False 2017-02-27 ENCODE 1 1 40 single-ended 568319124 Xiang-Dong Fu, UCSD 5aef5bdcabd4f017f830999b3aa57125 SRA:SRR6213114 https://www.encodeproject.org/files/ENCFF097RQE/@@download/ENCFF097RQE.fastq.gz Illumina HiSeq 2000 /files/ENCFF833ZOA/ released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF924FSA fastq reads ENCSR415TXN ChIP-seq EFO:0002067 K562 cell line Homo sapiens NONO-human ENCAB097MPS DNA SDS formaldehyde False 2017-02-27 ENCODE 2 1 40 single-ended 489144290 Xiang-Dong Fu, UCSD 4c728995f60302ae979c8cc309dc040b SRA:SRR6213113 https://www.encodeproject.org/files/ENCFF924FSA/@@download/ENCFF924FSA.fastq.gz Illumina HiSeq 2000 /files/ENCFF183RWB/ released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF913GCP bam alignments ENCSR415TXN ChIP-seq EFO:0002067 K562 cell line Homo sapiens NONO-human ENCAB097MPS DNA SDS formaldehyde False 2017-02-27 ENCODE 2 40 ENCFF807MUK, ENCFF924FSA 398735147 ENCODE Processing Pipeline 129881e0ff8526fd9f09b3843017b562 https://www.encodeproject.org/files/ENCFF913GCP/@@download/ENCFF913GCP.bam hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF984PYA bam alignments ENCSR415TXN ChIP-seq EFO:0002067 K562 cell line Homo sapiens NONO-human ENCAB097MPS DNA SDS formaldehyde False 2017-02-27 ENCODE 1 40 ENCFF097RQE, ENCFF807MUK 470911199 ENCODE Processing Pipeline 106a93d329219711196c00af29f16ebc https://www.encodeproject.org/files/ENCFF984PYA/@@download/ENCFF984PYA.bam hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF149NGQ bigWig signal p-value ENCSR415TXN ChIP-seq EFO:0002067 K562 cell line Homo sapiens NONO-human ENCAB097MPS DNA SDS formaldehyde False 2017-02-27 ENCODE 2 ENCFF413LCN, ENCFF466LEC, ENCFF913GCP 684365952 ENCODE Processing Pipeline 022e24779574df7c13ed78fe5755a0b2 https://www.encodeproject.org/files/ENCFF149NGQ/@@download/ENCFF149NGQ.bigWig hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF621AJS bigWig fold change over control ENCSR415TXN ChIP-seq EFO:0002067 K562 cell line Homo sapiens NONO-human ENCAB097MPS DNA SDS formaldehyde False 2017-02-27 ENCODE 1 ENCFF413LCN, ENCFF466LEC, ENCFF984PYA 436495776 ENCODE Processing Pipeline aa7d9a102592b4b638f23e0ef20df522 https://www.encodeproject.org/files/ENCFF621AJS/@@download/ENCFF621AJS.bigWig hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF617MUG bigWig signal p-value ENCSR415TXN ChIP-seq EFO:0002067 K562 cell line Homo sapiens NONO-human ENCAB097MPS DNA SDS formaldehyde False 2017-02-27 ENCODE 1 ENCFF413LCN, ENCFF466LEC, ENCFF984PYA 639042634 ENCODE Processing Pipeline 3345068b215e20132ba516f1d53fdf73 https://www.encodeproject.org/files/ENCFF617MUG/@@download/ENCFF617MUG.bigWig hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF153EMA bigWig fold change over control ENCSR415TXN ChIP-seq EFO:0002067 K562 cell line Homo sapiens NONO-human ENCAB097MPS DNA SDS formaldehyde False 2017-02-27 ENCODE 2 ENCFF413LCN, ENCFF466LEC, ENCFF913GCP 388503321 ENCODE Processing Pipeline 2bcd3bfad97a2311354f67969fd06b60 https://www.encodeproject.org/files/ENCFF153EMA/@@download/ENCFF153EMA.bigWig hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF535GLW bam unfiltered alignments ENCSR415TXN ChIP-seq EFO:0002067 K562 cell line Homo sapiens NONO-human ENCAB097MPS DNA SDS formaldehyde False 2017-02-27 ENCODE 1 ENCFF097RQE, ENCFF643CGH 751780422 ENCODE Processing Pipeline 9283ceb60f55566a710e81169e8730a5 https://www.encodeproject.org/files/ENCFF535GLW/@@download/ENCFF535GLW.bam GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF998EHO bam unfiltered alignments ENCSR415TXN ChIP-seq EFO:0002067 K562 cell line Homo sapiens NONO-human ENCAB097MPS DNA SDS formaldehyde False 2017-02-27 ENCODE 2 ENCFF643CGH, ENCFF924FSA 643671923 ENCODE Processing Pipeline 49e74dfd46b9ce88fe45dafd8ee5d9a5 https://www.encodeproject.org/files/ENCFF998EHO/@@download/ENCFF998EHO.bam GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF203MUO bam alignments ENCSR415TXN ChIP-seq EFO:0002067 K562 cell line Homo sapiens NONO-human ENCAB097MPS DNA SDS formaldehyde False 2017-02-27 ENCODE 1 40 ENCFF097RQE, ENCFF643CGH 470446133 ENCODE Processing Pipeline 04a226253e3075ebdcce504e61dd57cf https://www.encodeproject.org/files/ENCFF203MUO/@@download/ENCFF203MUO.bam GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF618MHM bam alignments ENCSR415TXN ChIP-seq EFO:0002067 K562 cell line Homo sapiens NONO-human ENCAB097MPS DNA SDS formaldehyde False 2017-02-27 ENCODE 2 40 ENCFF643CGH, ENCFF924FSA 398324919 ENCODE Processing Pipeline 729acd0138fa487ea2f63e7ed8f514ff https://www.encodeproject.org/files/ENCFF618MHM/@@download/ENCFF618MHM.bam GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF130TFL bigWig signal p-value ENCSR415TXN ChIP-seq EFO:0002067 K562 cell line Homo sapiens NONO-human ENCAB097MPS DNA SDS formaldehyde False 2017-02-27 ENCODE 2 ENCFF092OEQ, ENCFF618MHM, ENCFF936VXD 665634847 ENCODE Processing Pipeline 3b938cafaa46bfaaca007ac6cac1bef5 https://www.encodeproject.org/files/ENCFF130TFL/@@download/ENCFF130TFL.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF144MBH bigWig signal p-value ENCSR415TXN ChIP-seq EFO:0002067 K562 cell line Homo sapiens NONO-human ENCAB097MPS DNA SDS formaldehyde False 2017-02-27 ENCODE 1 ENCFF092OEQ, ENCFF203MUO, ENCFF936VXD 673662577 ENCODE Processing Pipeline eb65d69eb4b436ffcb56124332150105 https://www.encodeproject.org/files/ENCFF144MBH/@@download/ENCFF144MBH.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF673PEO bigWig signal p-value ENCSR415TXN ChIP-seq EFO:0002067 K562 cell line Homo sapiens NONO-human ENCAB097MPS DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF092OEQ, ENCFF203MUO, ENCFF618MHM, ENCFF936VXD 759771144 ENCODE Processing Pipeline 91eeb7275e35b0193973573ea2f6b114 https://www.encodeproject.org/files/ENCFF673PEO/@@download/ENCFF673PEO.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF421BQG bigWig fold change over control ENCSR415TXN ChIP-seq EFO:0002067 K562 cell line Homo sapiens NONO-human ENCAB097MPS DNA SDS formaldehyde False 2017-02-27 ENCODE 1 ENCFF092OEQ, ENCFF203MUO, ENCFF936VXD 433874306 ENCODE Processing Pipeline 3615a8478f24c517c025eddf64557b59 https://www.encodeproject.org/files/ENCFF421BQG/@@download/ENCFF421BQG.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF905TUF bigWig fold change over control ENCSR415TXN ChIP-seq EFO:0002067 K562 cell line Homo sapiens NONO-human ENCAB097MPS DNA SDS formaldehyde False 2017-02-27 ENCODE 2 ENCFF092OEQ, ENCFF618MHM, ENCFF936VXD 389579632 ENCODE Processing Pipeline 5dd761edbdcead4020da848e45b61884 https://www.encodeproject.org/files/ENCFF905TUF/@@download/ENCFF905TUF.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF976IUW bigWig fold change over control ENCSR415TXN ChIP-seq EFO:0002067 K562 cell line Homo sapiens NONO-human ENCAB097MPS DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF092OEQ, ENCFF203MUO, ENCFF618MHM, ENCFF936VXD 665818753 ENCODE Processing Pipeline e17f5c496e447991bb122484a3473930 https://www.encodeproject.org/files/ENCFF976IUW/@@download/ENCFF976IUW.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF729PYU bed narrowPeak peaks ENCSR415TXN ChIP-seq EFO:0002067 K562 cell line Homo sapiens NONO-human ENCAB097MPS DNA SDS formaldehyde False 2017-02-27 ENCODE 1 ENCFF092OEQ, ENCFF203MUO, ENCFF936VXD 5373720 ENCODE Processing Pipeline 3d415db4b3d62259eae684baa975101b https://www.encodeproject.org/files/ENCFF729PYU/@@download/ENCFF729PYU.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF234GXW bed narrowPeak peaks ENCSR415TXN ChIP-seq EFO:0002067 K562 cell line Homo sapiens NONO-human ENCAB097MPS DNA SDS formaldehyde False 2017-02-27 ENCODE 2 ENCFF092OEQ, ENCFF618MHM, ENCFF936VXD 5517711 ENCODE Processing Pipeline b15a8c1be18d7adab65e7c964409d99b https://www.encodeproject.org/files/ENCFF234GXW/@@download/ENCFF234GXW.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF180ORT bed narrowPeak peaks ENCSR415TXN ChIP-seq EFO:0002067 K562 cell line Homo sapiens NONO-human ENCAB097MPS DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF092OEQ, ENCFF203MUO, ENCFF618MHM, ENCFF936VXD 6517254 ENCODE Processing Pipeline f3a997d89cbbbc378eaf5e58d124dcd9 https://www.encodeproject.org/files/ENCFF180ORT/@@download/ENCFF180ORT.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF738TZB bigBed narrowPeak peaks ENCSR415TXN ChIP-seq EFO:0002067 K562 cell line Homo sapiens NONO-human ENCAB097MPS DNA SDS formaldehyde False 2017-02-27 ENCODE 1 ENCFF729PYU 13185022 ENCODE Processing Pipeline 04c6a9e7492032a6f8cd4a312cca36ae https://www.encodeproject.org/files/ENCFF738TZB/@@download/ENCFF738TZB.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF863RCB bigBed narrowPeak peaks ENCSR415TXN ChIP-seq EFO:0002067 K562 cell line Homo sapiens NONO-human ENCAB097MPS DNA SDS formaldehyde False 2017-02-27 ENCODE 2 ENCFF234GXW 13173501 ENCODE Processing Pipeline 11c1cab2fdaa1cadc2acabfce78a4657 https://www.encodeproject.org/files/ENCFF863RCB/@@download/ENCFF863RCB.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF316NWG bigBed narrowPeak peaks ENCSR415TXN ChIP-seq EFO:0002067 K562 cell line Homo sapiens NONO-human ENCAB097MPS DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF180ORT 13309119 ENCODE Processing Pipeline 0c99449eba5d5a9c71c93a01bf960c4e https://www.encodeproject.org/files/ENCFF316NWG/@@download/ENCFF316NWG.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF823CQK bed narrowPeak optimal idr thresholded peaks ENCSR415TXN ChIP-seq EFO:0002067 K562 cell line Homo sapiens NONO-human ENCAB097MPS DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF180ORT, ENCFF234GXW, ENCFF419RSJ, ENCFF729PYU 96411 ENCODE Processing Pipeline 23a93e1a57c7dd694ed44cfa4c5e72c1 https://www.encodeproject.org/files/ENCFF823CQK/@@download/ENCFF823CQK.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF426IHW bed narrowPeak conservative idr thresholded peaks ENCSR415TXN ChIP-seq EFO:0002067 K562 cell line Homo sapiens NONO-human ENCAB097MPS DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF180ORT, ENCFF234GXW, ENCFF419RSJ, ENCFF729PYU 93604 ENCODE Processing Pipeline 38988106db508f9fe7709ca9439e9657 https://www.encodeproject.org/files/ENCFF426IHW/@@download/ENCFF426IHW.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF901NLW bigBed narrowPeak conservative idr thresholded peaks ENCSR415TXN ChIP-seq EFO:0002067 K562 cell line Homo sapiens NONO-human ENCAB097MPS DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF426IHW 243254 ENCODE Processing Pipeline a5ff94c747bcaa308b03e0ec021bd017 https://www.encodeproject.org/files/ENCFF901NLW/@@download/ENCFF901NLW.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF844WQC bigBed narrowPeak optimal idr thresholded peaks ENCSR415TXN ChIP-seq EFO:0002067 K562 cell line Homo sapiens NONO-human ENCAB097MPS DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF823CQK 247741 ENCODE Processing Pipeline 8e855220908dd5ec7f25ebacb5f50231 https://www.encodeproject.org/files/ENCFF844WQC/@@download/ENCFF844WQC.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF753KMF bigWig fold change over control ENCSR415TXN ChIP-seq EFO:0002067 K562 cell line Homo sapiens NONO-human ENCAB097MPS DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF413LCN, ENCFF466LEC, ENCFF913GCP, ENCFF984PYA 677500988 ENCODE Processing Pipeline 113a45a51cf3290ae551a7e232aee8d6 https://www.encodeproject.org/files/ENCFF753KMF/@@download/ENCFF753KMF.bigWig hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF041UXA bigWig signal p-value ENCSR415TXN ChIP-seq EFO:0002067 K562 cell line Homo sapiens NONO-human ENCAB097MPS DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF413LCN, ENCFF466LEC, ENCFF913GCP, ENCFF984PYA 840201912 ENCODE Processing Pipeline fb35a57d4109fc6ca6cbfeadfb497185 https://www.encodeproject.org/files/ENCFF041UXA/@@download/ENCFF041UXA.bigWig hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF609LOZ bed narrowPeak peaks ENCSR415TXN ChIP-seq EFO:0002067 K562 cell line Homo sapiens NONO-human ENCAB097MPS DNA SDS formaldehyde False 2017-02-27 ENCODE 2 ENCFF413LCN, ENCFF466LEC, ENCFF913GCP 5522784 ENCODE Processing Pipeline 90f8e7d8022f73e44109afeff47bf187 https://www.encodeproject.org/files/ENCFF609LOZ/@@download/ENCFF609LOZ.bed.gz hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF264HYE bigBed narrowPeak conservative idr thresholded peaks ENCSR415TXN ChIP-seq EFO:0002067 K562 cell line Homo sapiens NONO-human ENCAB097MPS DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF219YST 184739 ENCODE Processing Pipeline cd37cf3580d017c98de340c6717dbd8c https://www.encodeproject.org/files/ENCFF264HYE/@@download/ENCFF264HYE.bigBed hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF028TZK bed narrowPeak peaks ENCSR415TXN ChIP-seq EFO:0002067 K562 cell line Homo sapiens NONO-human ENCAB097MPS DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF413LCN, ENCFF466LEC, ENCFF913GCP, ENCFF984PYA 6537634 ENCODE Processing Pipeline 93dc2328c6392cb99f4502781d628657 https://www.encodeproject.org/files/ENCFF028TZK/@@download/ENCFF028TZK.bed.gz hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF219YST bed narrowPeak conservative idr thresholded peaks ENCSR415TXN ChIP-seq EFO:0002067 K562 cell line Homo sapiens NONO-human ENCAB097MPS DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF001TDO, ENCFF028TZK, ENCFF609LOZ, ENCFF882WGE 83629 ENCODE Processing Pipeline f744641641fba917b771b772cfb98d2a https://www.encodeproject.org/files/ENCFF219YST/@@download/ENCFF219YST.bed.gz hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF134NMW bed narrowPeak optimal idr thresholded peaks ENCSR415TXN ChIP-seq EFO:0002067 K562 cell line Homo sapiens NONO-human ENCAB097MPS DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF001TDO, ENCFF028TZK, ENCFF609LOZ, ENCFF882WGE 90103 ENCODE Processing Pipeline e27dcf77f1ba6a47765799b317b359ae https://www.encodeproject.org/files/ENCFF134NMW/@@download/ENCFF134NMW.bed.gz hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF602CRB bigBed narrowPeak peaks ENCSR415TXN ChIP-seq EFO:0002067 K562 cell line Homo sapiens NONO-human ENCAB097MPS DNA SDS formaldehyde False 2017-02-27 ENCODE 1 ENCFF882WGE 13220716 ENCODE Processing Pipeline 825cb007527bdd92dfabffa00e5d3bc4 https://www.encodeproject.org/files/ENCFF602CRB/@@download/ENCFF602CRB.bigBed hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF135HSY bigBed narrowPeak optimal idr thresholded peaks ENCSR415TXN ChIP-seq EFO:0002067 K562 cell line Homo sapiens NONO-human ENCAB097MPS DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF134NMW 192741 ENCODE Processing Pipeline 8e40cc37ff6bd72fd73e638a49d6354c https://www.encodeproject.org/files/ENCFF135HSY/@@download/ENCFF135HSY.bigBed hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF882WGE bed narrowPeak peaks ENCSR415TXN ChIP-seq EFO:0002067 K562 cell line Homo sapiens NONO-human ENCAB097MPS DNA SDS formaldehyde False 2017-02-27 ENCODE 1 ENCFF413LCN, ENCFF466LEC, ENCFF984PYA 5668214 ENCODE Processing Pipeline bb6cceac098c9c18a285ddaac2ab0c6c https://www.encodeproject.org/files/ENCFF882WGE/@@download/ENCFF882WGE.bed.gz hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF084HXP bigBed narrowPeak peaks ENCSR415TXN ChIP-seq EFO:0002067 K562 cell line Homo sapiens NONO-human ENCAB097MPS DNA SDS formaldehyde False 2017-02-27 ENCODE 2 ENCFF609LOZ 13160144 ENCODE Processing Pipeline 423b47c3fb7caf0e70e690b14b645770 https://www.encodeproject.org/files/ENCFF084HXP/@@download/ENCFF084HXP.bigBed hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF083GXT bigBed narrowPeak peaks ENCSR415TXN ChIP-seq EFO:0002067 K562 cell line Homo sapiens NONO-human ENCAB097MPS DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF028TZK 13297790 ENCODE Processing Pipeline ac464002fa60e2b69ff41f1a54319369 https://www.encodeproject.org/files/ENCFF083GXT/@@download/ENCFF083GXT.bigBed hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF485NVX bam unfiltered alignments ENCSR415TXN ChIP-seq EFO:0002067 K562 cell line Homo sapiens NONO-human ENCAB097MPS DNA SDS formaldehyde False 2017-02-27 ENCODE 2 40 ENCFF807MUK, ENCFF924FSA 640873708 ENCODE Processing Pipeline 47d7100f40badb2def7fdcb08e1c3973 https://www.encodeproject.org/files/ENCFF485NVX/@@download/ENCFF485NVX.bam hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF614DLD bam unfiltered alignments ENCSR415TXN ChIP-seq EFO:0002067 K562 cell line Homo sapiens NONO-human ENCAB097MPS DNA SDS formaldehyde False 2017-02-27 ENCODE 1 40 ENCFF097RQE, ENCFF807MUK 748371190 ENCODE Processing Pipeline a9f71f5baa8641c3e0672d4625101e15 https://www.encodeproject.org/files/ENCFF614DLD/@@download/ENCFF614DLD.bam hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF000QIV bam alignments ENCSR000BRW ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM28-human ENCAB000AMB DNA see document see document False 2012-09-10 ENCODE 2 1 546887468 Richard Myers, HAIB f1a953d67a080ad4042eb446aab5c1c7 https://www.encodeproject.org/files/ENCFF000QIV/@@download/ENCFF000QIV.bam hg19 archived borderline replicate concordance, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample, missing derived_from, out of date analysis, inconsistent mapped reads lengths insufficient read depth ENCFF000QIX bigBed broadPeak peaks ENCSR000BRW ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM28-human ENCAB000AMB DNA see document see document False 2012-09-10 ENCODE 1 1 ENCFF001ULV 450165 Richard Myers, HAIB b00a1c3ecfe60a7d292c55370621857d https://www.encodeproject.org/files/ENCFF000QIX/@@download/ENCFF000QIX.bigBed hg19 archived borderline replicate concordance, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample, out of date analysis, inconsistent mapped reads lengths insufficient read depth ENCFF000QIZ bigBed broadPeak peaks ENCSR000BRW ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM28-human ENCAB000AMB DNA see document see document False 2012-09-10 ENCODE 2 1 ENCFF001ULW 179975 Richard Myers, HAIB 3032b45c8496ff5006f2eb26ee621fe8 https://www.encodeproject.org/files/ENCFF000QIZ/@@download/ENCFF000QIZ.bigBed hg19 archived borderline replicate concordance, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample, out of date analysis, inconsistent mapped reads lengths insufficient read depth ENCFF000QJA bigWig raw signal ENCSR000BRW ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM28-human ENCAB000AMB DNA see document see document False 2012-09-10 ENCODE 1 1 297408871 Richard Myers, HAIB 09b19ccbfbbddcaead62be5e0e390904 https://www.encodeproject.org/files/ENCFF000QJA/@@download/ENCFF000QJA.bigWig hg19 archived borderline replicate concordance, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample, missing derived_from, out of date analysis, inconsistent mapped reads lengths insufficient read depth ENCFF000QJB bam alignments ENCSR000BRW ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM28-human ENCAB000AMB DNA see document see document False 2012-09-10 ENCODE 1 ENCFF000QJK 1687239678 Richard Myers, HAIB ea8f0a0159db423e13d79ada32d41d44 https://www.encodeproject.org/files/ENCFF000QJB/@@download/ENCFF000QJB.bam hg19 archived borderline replicate concordance, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample, out of date analysis, inconsistent mapped reads lengths insufficient read depth ENCFF000QJC bigWig raw signal ENCSR000BRW ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM28-human ENCAB000AMB DNA see document see document False 2012-09-10 ENCODE 2 1 90133224 Richard Myers, HAIB 29746fb0e97345f44f73ee46ad82f884 https://www.encodeproject.org/files/ENCFF000QJC/@@download/ENCFF000QJC.bigWig hg19 archived borderline replicate concordance, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample, out of date analysis, inconsistent mapped reads lengths, missing derived_from insufficient read depth ENCFF000QJH fastq reads ENCSR000BRW ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM28-human ENCAB000AMB DNA see document see document False 2012-09-10 ENCODE 2 1 36 single-ended 513783371 Richard Myers, HAIB fc790de64236167c774a1e5a918bfaf7 https://www.encodeproject.org/files/ENCFF000QJH/@@download/ENCFF000QJH.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF001RVN/ released borderline replicate concordance, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, inconsistent control read length, low read length biological replicates with identical biosample, out of date analysis, inconsistent mapped reads lengths insufficient read depth ENCFF000QJK fastq reads ENCSR000BRW ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM28-human ENCAB000AMB DNA see document see document False 2012-09-10 ENCODE 1 1 36 single-ended 1617203312 Richard Myers, HAIB 3b6f19d4bda8b74d005ba11575d306ea https://www.encodeproject.org/files/ENCFF000QJK/@@download/ENCFF000QJK.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000QFG/ released borderline replicate concordance, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample, out of date analysis, inconsistent mapped reads lengths insufficient read depth ENCFF001ULV bed broadPeak peaks ENCSR000BRW ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM28-human ENCAB000AMB DNA see document see document False 2012-09-10 ENCODE 1 1 260642 Richard Myers, HAIB 0a69b06cf10e71e76523e2eb49d10009 https://www.encodeproject.org/files/ENCFF001ULV/@@download/ENCFF001ULV.bed.gz hg19 archived borderline replicate concordance, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample, missing derived_from, out of date analysis, inconsistent mapped reads lengths insufficient read depth ENCFF001ULW bed broadPeak peaks ENCSR000BRW ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM28-human ENCAB000AMB DNA see document see document False 2012-09-10 ENCODE 2 1 75553 Richard Myers, HAIB 93e116c0c7bd0deacafd7d88bfcd5f9a https://www.encodeproject.org/files/ENCFF001ULW/@@download/ENCFF001ULW.bed.gz hg19 archived borderline replicate concordance, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample, missing derived_from, out of date analysis, inconsistent mapped reads lengths insufficient read depth ENCFF335TQY bam unfiltered alignments ENCSR000BRW ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM28-human ENCAB000AMB DNA see document see document False 2012-09-10 ENCODE 1 36 ENCFF000QJK, ENCFF807MUK 1802619534 ENCODE Processing Pipeline 1e290d0d9e12262874d9ee6980574994 https://www.encodeproject.org/files/ENCFF335TQY/@@download/ENCFF335TQY.bam hg19 released borderline replicate concordance, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample, out of date analysis, inconsistent mapped reads lengths insufficient read depth ENCFF452MCW bam unfiltered alignments ENCSR000BRW ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM28-human ENCAB000AMB DNA see document see document False 2012-09-10 ENCODE 2 36 ENCFF000QJH, ENCFF807MUK 586755093 ENCODE Processing Pipeline 5ba01d04ddb6bed839fec18ed9e69518 https://www.encodeproject.org/files/ENCFF452MCW/@@download/ENCFF452MCW.bam hg19 released borderline replicate concordance, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample, out of date analysis, inconsistent mapped reads lengths insufficient read depth ENCFF482NNF bam alignments ENCSR000BRW ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM28-human ENCAB000AMB DNA see document see document False 2012-09-10 ENCODE 2 ENCFF000QJH, ENCFF807MUK 395595102 ENCODE Processing Pipeline e151b5c765218c06df0a9d4c8f0fe716 https://www.encodeproject.org/files/ENCFF482NNF/@@download/ENCFF482NNF.bam hg19 released borderline replicate concordance, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample, out of date analysis, inconsistent mapped reads lengths insufficient read depth ENCFF275STF bam alignments ENCSR000BRW ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM28-human ENCAB000AMB DNA see document see document False 2012-09-10 ENCODE 1 ENCFF000QJK, ENCFF807MUK 1143339499 ENCODE Processing Pipeline b1e4b57b59b9fc230d9c59e49b4790a5 https://www.encodeproject.org/files/ENCFF275STF/@@download/ENCFF275STF.bam hg19 released borderline replicate concordance, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample, out of date analysis, inconsistent mapped reads lengths insufficient read depth ENCFF906MHJ bigBed narrowPeak optimal idr thresholded peaks ENCSR000BRW ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM28-human ENCAB000AMB DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF858QMI 472857 ENCODE Processing Pipeline b3a7537ff806e5e9484a22de43811ec3 https://www.encodeproject.org/files/ENCFF906MHJ/@@download/ENCFF906MHJ.bigBed hg19 released borderline replicate concordance, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample, out of date analysis, inconsistent mapped reads lengths insufficient read depth ENCFF112GUK bigWig fold change over control ENCSR000BRW ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM28-human ENCAB000AMB DNA see document see document False 2012-09-10 ENCODE 1 ENCFF275STF, ENCFF522HDC 621497794 ENCODE Processing Pipeline 484cdecdae05d5e61d09dac9ecd84a1c https://www.encodeproject.org/files/ENCFF112GUK/@@download/ENCFF112GUK.bigWig hg19 released borderline replicate concordance, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample, out of date analysis, inconsistent mapped reads lengths insufficient read depth ENCFF447SUC bigWig fold change over control ENCSR000BRW ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM28-human ENCAB000AMB DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF275STF, ENCFF468ZDX, ENCFF482NNF, ENCFF522HDC 1032639188 ENCODE Processing Pipeline ef0b96796a33b6366832f825f4ac1cd1 https://www.encodeproject.org/files/ENCFF447SUC/@@download/ENCFF447SUC.bigWig hg19 released borderline replicate concordance, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample, out of date analysis, inconsistent mapped reads lengths insufficient read depth ENCFF140YDA bed narrowPeak peaks ENCSR000BRW ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM28-human ENCAB000AMB DNA see document see document False 2012-09-10 ENCODE 1 ENCFF275STF, ENCFF522HDC 6352142 ENCODE Processing Pipeline 8b9ed27f9e33de801da5affaeec39691 https://www.encodeproject.org/files/ENCFF140YDA/@@download/ENCFF140YDA.bed.gz hg19 released borderline replicate concordance, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample, out of date analysis, inconsistent mapped reads lengths insufficient read depth ENCFF721WZY bed narrowPeak peaks ENCSR000BRW ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM28-human ENCAB000AMB DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF275STF, ENCFF468ZDX, ENCFF482NNF, ENCFF522HDC 6846560 ENCODE Processing Pipeline e66f5d29cd95a43e2d6f62e5a3bafe37 https://www.encodeproject.org/files/ENCFF721WZY/@@download/ENCFF721WZY.bed.gz hg19 released borderline replicate concordance, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample, out of date analysis, inconsistent mapped reads lengths insufficient read depth ENCFF848EGA bigWig signal p-value ENCSR000BRW ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM28-human ENCAB000AMB DNA see document see document False 2012-09-10 ENCODE 2 ENCFF468ZDX, ENCFF482NNF 485755478 ENCODE Processing Pipeline d83560aa1e49624aa0b6fb2e5df0ac93 https://www.encodeproject.org/files/ENCFF848EGA/@@download/ENCFF848EGA.bigWig hg19 released borderline replicate concordance, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample, out of date analysis, inconsistent mapped reads lengths insufficient read depth ENCFF034IPI bigBed narrowPeak peaks ENCSR000BRW ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM28-human ENCAB000AMB DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF721WZY 13451268 ENCODE Processing Pipeline 5ee4e32e6f3d2f8b204dc1ae1ff3edf3 https://www.encodeproject.org/files/ENCFF034IPI/@@download/ENCFF034IPI.bigBed hg19 released borderline replicate concordance, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample, out of date analysis, inconsistent mapped reads lengths insufficient read depth ENCFF600QVD bed narrowPeak conservative idr thresholded peaks ENCSR000BRW ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM28-human ENCAB000AMB DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF001TDO, ENCFF140YDA, ENCFF700BWV, ENCFF721WZY 135841 ENCODE Processing Pipeline 596ec4ba387fcc19d849fec109208b15 https://www.encodeproject.org/files/ENCFF600QVD/@@download/ENCFF600QVD.bed.gz hg19 released borderline replicate concordance, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample, out of date analysis, inconsistent mapped reads lengths insufficient read depth ENCFF959MYV bigBed narrowPeak conservative idr thresholded peaks ENCSR000BRW ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM28-human ENCAB000AMB DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF600QVD 319720 ENCODE Processing Pipeline 73a9ac1ee3ae4fd7199b345989e9f32b https://www.encodeproject.org/files/ENCFF959MYV/@@download/ENCFF959MYV.bigBed hg19 released borderline replicate concordance, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample, out of date analysis, inconsistent mapped reads lengths insufficient read depth ENCFF461HUA bigWig fold change over control ENCSR000BRW ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM28-human ENCAB000AMB DNA see document see document False 2012-09-10 ENCODE 2 ENCFF468ZDX, ENCFF482NNF 271413332 ENCODE Processing Pipeline dfe6b065a554d58ad973c53354d58ee5 https://www.encodeproject.org/files/ENCFF461HUA/@@download/ENCFF461HUA.bigWig hg19 released borderline replicate concordance, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample, out of date analysis, inconsistent mapped reads lengths insufficient read depth ENCFF597BEZ bigWig signal p-value ENCSR000BRW ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM28-human ENCAB000AMB DNA see document see document False 2012-09-10 ENCODE 1 ENCFF275STF, ENCFF522HDC 606123769 ENCODE Processing Pipeline 497f34f45682e81b239bc2de517413ab https://www.encodeproject.org/files/ENCFF597BEZ/@@download/ENCFF597BEZ.bigWig hg19 released borderline replicate concordance, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample, out of date analysis, inconsistent mapped reads lengths insufficient read depth ENCFF679RWO bigWig signal p-value ENCSR000BRW ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM28-human ENCAB000AMB DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF275STF, ENCFF468ZDX, ENCFF482NNF, ENCFF522HDC 1059502875 ENCODE Processing Pipeline 84786e12dea8c6ea359f734f914bc9a3 https://www.encodeproject.org/files/ENCFF679RWO/@@download/ENCFF679RWO.bigWig hg19 released borderline replicate concordance, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample, out of date analysis, inconsistent mapped reads lengths insufficient read depth ENCFF700BWV bed narrowPeak peaks ENCSR000BRW ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM28-human ENCAB000AMB DNA see document see document False 2012-09-10 ENCODE 2 ENCFF468ZDX, ENCFF482NNF 3992676 ENCODE Processing Pipeline 9d32157d894fd70a374755130566ef07 https://www.encodeproject.org/files/ENCFF700BWV/@@download/ENCFF700BWV.bed.gz hg19 released borderline replicate concordance, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample, out of date analysis, inconsistent mapped reads lengths insufficient read depth ENCFF091OTC bigBed narrowPeak peaks ENCSR000BRW ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM28-human ENCAB000AMB DNA see document see document False 2012-09-10 ENCODE 1 ENCFF140YDA 13294518 ENCODE Processing Pipeline efe716b018c7be0427988528dc75f433 https://www.encodeproject.org/files/ENCFF091OTC/@@download/ENCFF091OTC.bigBed hg19 released borderline replicate concordance, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample, out of date analysis, inconsistent mapped reads lengths insufficient read depth ENCFF938ETZ bigBed narrowPeak peaks ENCSR000BRW ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM28-human ENCAB000AMB DNA see document see document False 2012-09-10 ENCODE 2 ENCFF700BWV 8957433 ENCODE Processing Pipeline 6a2ff89a9067c3aee890fce57e8c4949 https://www.encodeproject.org/files/ENCFF938ETZ/@@download/ENCFF938ETZ.bigBed hg19 released borderline replicate concordance, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample, out of date analysis, inconsistent mapped reads lengths insufficient read depth ENCFF858QMI bed narrowPeak optimal idr thresholded peaks ENCSR000BRW ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM28-human ENCAB000AMB DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF001TDO, ENCFF140YDA, ENCFF700BWV, ENCFF721WZY 243606 ENCODE Processing Pipeline d4d2b801157ddbdfb7166fcf31bbfb22 https://www.encodeproject.org/files/ENCFF858QMI/@@download/ENCFF858QMI.bed.gz hg19 released borderline replicate concordance, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample, out of date analysis, inconsistent mapped reads lengths insufficient read depth ENCFF904CPI bam alignments ENCSR000BRW ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM28-human ENCAB000AMB DNA see document see document False 2012-09-10 ENCODE 2 36 ENCFF000QJH, ENCFF643CGH 395471962 ENCODE Processing Pipeline 12382461a588965b5a5e4ade25dc4f13 https://www.encodeproject.org/files/ENCFF904CPI/@@download/ENCFF904CPI.bam GRCh38 released borderline replicate concordance, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample, out of date analysis, inconsistent mapped reads lengths insufficient read depth ENCFF648HIU bam unfiltered alignments ENCSR000BRW ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM28-human ENCAB000AMB DNA see document see document False 2012-09-10 ENCODE 2 36 ENCFF000QJH, ENCFF643CGH 588138482 ENCODE Processing Pipeline 4b5e07434e7abd792781f3e3a1549860 https://www.encodeproject.org/files/ENCFF648HIU/@@download/ENCFF648HIU.bam GRCh38 released borderline replicate concordance, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample, out of date analysis, inconsistent mapped reads lengths insufficient read depth ENCFF555KVE bam unfiltered alignments ENCSR000BRW ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM28-human ENCAB000AMB DNA see document see document False 2012-09-10 ENCODE 1 36 ENCFF000QJK, ENCFF643CGH 1807291659 ENCODE Processing Pipeline d29d127bba63d7baa3e3b285bc9ebac4 https://www.encodeproject.org/files/ENCFF555KVE/@@download/ENCFF555KVE.bam GRCh38 released borderline replicate concordance, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample, out of date analysis, inconsistent mapped reads lengths insufficient read depth ENCFF397ZVS bam alignments ENCSR000BRW ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM28-human ENCAB000AMB DNA see document see document False 2012-09-10 ENCODE 1 36 ENCFF000QJK, ENCFF643CGH 1142970133 ENCODE Processing Pipeline 01b13d86d1af15d2174a91611388f0e5 https://www.encodeproject.org/files/ENCFF397ZVS/@@download/ENCFF397ZVS.bam GRCh38 released borderline replicate concordance, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample, out of date analysis, inconsistent mapped reads lengths insufficient read depth ENCFF261BMQ fastq reads ENCSR000BRW ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM28-human ENCAB000AMB DNA see document see document False 2012-09-10 ENCODE 2 1 36 single-ended 1068924080 Richard Myers, HAIB 62b84201e70f3e0daf42e1ca37052ae7 https://www.encodeproject.org/files/ENCFF261BMQ/@@download/ENCFF261BMQ.fastq.gz Illumina HiSeq 2000 released borderline replicate concordance, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample, out of date analysis, inconsistent mapped reads lengths insufficient read depth, missing controlled_by ENCFF776LSV bigWig signal p-value ENCSR000BRW ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM28-human ENCAB000AMB DNA see document see document False 2012-09-10 ENCODE 1 ENCFF397ZVS, ENCFF836OEO 631562337 ENCODE Processing Pipeline 74523a8f711513fcc79f0ef4de65eff5 https://www.encodeproject.org/files/ENCFF776LSV/@@download/ENCFF776LSV.bigWig GRCh38 released borderline replicate concordance, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample, out of date analysis, inconsistent mapped reads lengths insufficient read depth ENCFF814OOG bigWig signal p-value ENCSR000BRW ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM28-human ENCAB000AMB DNA see document see document False 2012-09-10 ENCODE 2 ENCFF204GLJ, ENCFF904CPI 494990899 ENCODE Processing Pipeline b746dd97e7d9e0b27c66fef5632b1f1a https://www.encodeproject.org/files/ENCFF814OOG/@@download/ENCFF814OOG.bigWig GRCh38 released borderline replicate concordance, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample, out of date analysis, inconsistent mapped reads lengths insufficient read depth ENCFF795LAL bigWig signal p-value ENCSR000BRW ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM28-human ENCAB000AMB DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF204GLJ, ENCFF397ZVS, ENCFF836OEO, ENCFF904CPI 1016937018 ENCODE Processing Pipeline 9eb518f115cae4be345080927aafcb6e https://www.encodeproject.org/files/ENCFF795LAL/@@download/ENCFF795LAL.bigWig GRCh38 released borderline replicate concordance, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample, out of date analysis, inconsistent mapped reads lengths insufficient read depth ENCFF726ONU bigWig fold change over control ENCSR000BRW ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM28-human ENCAB000AMB DNA see document see document False 2012-09-10 ENCODE 1 ENCFF397ZVS, ENCFF836OEO 630788200 ENCODE Processing Pipeline d1220007ff87f9fb50b950c32b2fcd8c https://www.encodeproject.org/files/ENCFF726ONU/@@download/ENCFF726ONU.bigWig GRCh38 released borderline replicate concordance, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample, out of date analysis, inconsistent mapped reads lengths insufficient read depth ENCFF545YAP bigWig fold change over control ENCSR000BRW ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM28-human ENCAB000AMB DNA see document see document False 2012-09-10 ENCODE 2 ENCFF204GLJ, ENCFF904CPI 280246823 ENCODE Processing Pipeline 483b1b70b8275a4460c65650dd96a60c https://www.encodeproject.org/files/ENCFF545YAP/@@download/ENCFF545YAP.bigWig GRCh38 released borderline replicate concordance, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample, out of date analysis, inconsistent mapped reads lengths insufficient read depth ENCFF168SJR bed narrowPeak peaks ENCSR000BRW ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM28-human ENCAB000AMB DNA see document see document False 2012-09-10 ENCODE 2 ENCFF204GLJ, ENCFF904CPI 3902770 ENCODE Processing Pipeline 3b4795c308d9de113ba1b9b69af16b65 https://www.encodeproject.org/files/ENCFF168SJR/@@download/ENCFF168SJR.bed.gz GRCh38 released borderline replicate concordance, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample, out of date analysis, inconsistent mapped reads lengths insufficient read depth ENCFF845IXT bed narrowPeak peaks ENCSR000BRW ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM28-human ENCAB000AMB DNA see document see document False 2012-09-10 ENCODE 1 ENCFF397ZVS, ENCFF836OEO 6215754 ENCODE Processing Pipeline 3480c7f0cc1a561f4a9a8dcd0483d627 https://www.encodeproject.org/files/ENCFF845IXT/@@download/ENCFF845IXT.bed.gz GRCh38 released borderline replicate concordance, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample, out of date analysis, inconsistent mapped reads lengths insufficient read depth ENCFF651CUK bigWig fold change over control ENCSR000BRW ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM28-human ENCAB000AMB DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF204GLJ, ENCFF397ZVS, ENCFF836OEO, ENCFF904CPI 1022478338 ENCODE Processing Pipeline 94f8d9a79d14f474f900a37c25b3a235 https://www.encodeproject.org/files/ENCFF651CUK/@@download/ENCFF651CUK.bigWig GRCh38 released borderline replicate concordance, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample, out of date analysis, inconsistent mapped reads lengths insufficient read depth ENCFF542DYA bigBed narrowPeak peaks ENCSR000BRW ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM28-human ENCAB000AMB DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF565FCD 13456246 ENCODE Processing Pipeline b9a69f3186cf77a4974ecaff051ec4d4 https://www.encodeproject.org/files/ENCFF542DYA/@@download/ENCFF542DYA.bigBed GRCh38 released borderline replicate concordance, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample, out of date analysis, inconsistent mapped reads lengths insufficient read depth ENCFF565FCD bed narrowPeak peaks ENCSR000BRW ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM28-human ENCAB000AMB DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF204GLJ, ENCFF397ZVS, ENCFF836OEO, ENCFF904CPI 6718047 ENCODE Processing Pipeline 5f5e6b6f11ecd17173fef24c2bb08cfe https://www.encodeproject.org/files/ENCFF565FCD/@@download/ENCFF565FCD.bed.gz GRCh38 released borderline replicate concordance, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample, out of date analysis, inconsistent mapped reads lengths insufficient read depth ENCFF888CBW bigBed narrowPeak optimal idr thresholded peaks ENCSR000BRW ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM28-human ENCAB000AMB DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF996AMX 476524 ENCODE Processing Pipeline 90bd3a5d4757112b311ccc296f1b7c7d https://www.encodeproject.org/files/ENCFF888CBW/@@download/ENCFF888CBW.bigBed GRCh38 released borderline replicate concordance, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample, out of date analysis, inconsistent mapped reads lengths insufficient read depth ENCFF592VHW bigBed narrowPeak peaks ENCSR000BRW ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM28-human ENCAB000AMB DNA see document see document False 2012-09-10 ENCODE 2 ENCFF168SJR 8863372 ENCODE Processing Pipeline 8fb68e43ad0cb4186674c4a2542fa53a https://www.encodeproject.org/files/ENCFF592VHW/@@download/ENCFF592VHW.bigBed GRCh38 released borderline replicate concordance, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample, out of date analysis, inconsistent mapped reads lengths insufficient read depth ENCFF399ERD bigBed narrowPeak conservative idr thresholded peaks ENCSR000BRW ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM28-human ENCAB000AMB DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF528EDV 317895 ENCODE Processing Pipeline 34d165faa2f2d916b552b58ae654ced2 https://www.encodeproject.org/files/ENCFF399ERD/@@download/ENCFF399ERD.bigBed GRCh38 released borderline replicate concordance, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample, out of date analysis, inconsistent mapped reads lengths insufficient read depth ENCFF060UUD bam unfiltered alignments ENCSR000BRW ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM28-human ENCAB000AMB DNA see document see document False 2012-09-10 ENCODE 1 36 ENCFF000QJK, ENCFF643CGH 1807291664 ENCODE Processing Pipeline 67d0516d5ba6eb718e238da6964a1a79 https://www.encodeproject.org/files/ENCFF060UUD/@@download/ENCFF060UUD.bam GRCh38 released borderline replicate concordance, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample, out of date analysis, inconsistent mapped reads lengths insufficient read depth ENCFF592IZF bigBed narrowPeak peaks ENCSR000BRW ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM28-human ENCAB000AMB DNA see document see document False 2012-09-10 ENCODE 1 ENCFF845IXT 13329880 ENCODE Processing Pipeline 24c25e4f016d7f2d43bdf71b6550da7f https://www.encodeproject.org/files/ENCFF592IZF/@@download/ENCFF592IZF.bigBed GRCh38 released borderline replicate concordance, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample, out of date analysis, inconsistent mapped reads lengths insufficient read depth ENCFF528EDV bed narrowPeak conservative idr thresholded peaks ENCSR000BRW ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM28-human ENCAB000AMB DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF168SJR, ENCFF419RSJ, ENCFF565FCD, ENCFF845IXT 134702 ENCODE Processing Pipeline e6cf147e42dd3a8517369d47aae30b05 https://www.encodeproject.org/files/ENCFF528EDV/@@download/ENCFF528EDV.bed.gz GRCh38 released borderline replicate concordance, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample, out of date analysis, inconsistent mapped reads lengths insufficient read depth ENCFF996AMX bed narrowPeak optimal idr thresholded peaks ENCSR000BRW ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM28-human ENCAB000AMB DNA see document see document False 2012-09-10 ENCODE 1, 2 ENCFF168SJR, ENCFF419RSJ, ENCFF565FCD, ENCFF845IXT 246030 ENCODE Processing Pipeline 360d0e8096959f20f6c52a978ed25c87 https://www.encodeproject.org/files/ENCFF996AMX/@@download/ENCFF996AMX.bed.gz GRCh38 released borderline replicate concordance, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample, out of date analysis, inconsistent mapped reads lengths insufficient read depth ENCFF147MVP bam unfiltered alignments ENCSR000BRW ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM28-human ENCAB000AMB DNA see document see document False 2012-09-10 ENCODE 2 36 ENCFF000QJH, ENCFF261BMQ, ENCFF643CGH 1362097283 ENCODE Processing Pipeline 57f6911f9f6857f62f9f8e69b1861ea1 https://www.encodeproject.org/files/ENCFF147MVP/@@download/ENCFF147MVP.bam GRCh38 released borderline replicate concordance, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample, out of date analysis, inconsistent mapped reads lengths insufficient read depth ENCFF206YYH bam alignments ENCSR000BRW ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM28-human ENCAB000AMB DNA see document see document False 2012-09-10 ENCODE 2 36 ENCFF000QJH, ENCFF261BMQ, ENCFF643CGH 789991107 ENCODE Processing Pipeline 1a3c8ed2582f34e8cc3ee156cdb5d5e3 https://www.encodeproject.org/files/ENCFF206YYH/@@download/ENCFF206YYH.bam GRCh38 released borderline replicate concordance, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample, out of date analysis, inconsistent mapped reads lengths insufficient read depth ENCFF793KZB bam alignments ENCSR000BRW ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM28-human ENCAB000AMB DNA see document see document False 2012-09-10 ENCODE 1 36 ENCFF000QJK, ENCFF643CGH 1142970137 ENCODE Processing Pipeline 87e80543df35e3da7289fe2be473c8f7 https://www.encodeproject.org/files/ENCFF793KZB/@@download/ENCFF793KZB.bam GRCh38 released borderline replicate concordance, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample, out of date analysis, inconsistent mapped reads lengths insufficient read depth ENCFF438QQH fastq reads ENCSR283ZNI ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB8A-human ENCAB143NDO DNA False 2018-01-26 ENCODE 1 1 100 paired-ended 2 ENCFF933DHP 3734417380 Michael Snyder, Stanford 8d5731187e726ddeda0c2e0539f93912 https://www.encodeproject.org/files/ENCFF438QQH/@@download/ENCFF438QQH.fastq.gz Illumina HiSeq 4000 /files/ENCFF502GTS/ released mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF933DHP fastq reads ENCSR283ZNI ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB8A-human ENCAB143NDO DNA False 2018-01-26 ENCODE 1 1 100 paired-ended 1 ENCFF438QQH 3401512885 Michael Snyder, Stanford a35d338e539e47d47e0faec95b99cc01 https://www.encodeproject.org/files/ENCFF933DHP/@@download/ENCFF933DHP.fastq.gz Illumina HiSeq 4000 /files/ENCFF498JMO/ released mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF522KRF fastq reads ENCSR283ZNI ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB8A-human ENCAB143NDO DNA False 2018-01-26 ENCODE 2 1 100 paired-ended 2 ENCFF891NFG 3337520059 Michael Snyder, Stanford 909b7e2abe795f3ea03dd9f6ae3cdcd1 https://www.encodeproject.org/files/ENCFF522KRF/@@download/ENCFF522KRF.fastq.gz Illumina HiSeq 4000 /files/ENCFF837MIV/ released mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF891NFG fastq reads ENCSR283ZNI ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB8A-human ENCAB143NDO DNA False 2018-01-26 ENCODE 2 1 100 paired-ended 1 ENCFF522KRF 3036958041 Michael Snyder, Stanford ca46acc3608a579e5ffcd2e26ec25a1a https://www.encodeproject.org/files/ENCFF891NFG/@@download/ENCFF891NFG.fastq.gz Illumina HiSeq 4000 /files/ENCFF259GQA/ released mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF127FGI bam unfiltered alignments ENCSR283ZNI ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB8A-human ENCAB143NDO DNA False 2018-01-26 ENCODE 2 100 ENCFF522KRF, ENCFF807MUK, ENCFF891NFG 6133857519 ENCODE Processing Pipeline b5035c671c45f458f4f84a9e67751bb4 https://www.encodeproject.org/files/ENCFF127FGI/@@download/ENCFF127FGI.bam hg19 released mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF391HMM bam unfiltered alignments ENCSR283ZNI ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB8A-human ENCAB143NDO DNA False 2018-01-26 ENCODE 2 100 ENCFF522KRF, ENCFF643CGH, ENCFF891NFG 6142806536 ENCODE Processing Pipeline 93df8f7312ca23843a1ac9dede098312 https://www.encodeproject.org/files/ENCFF391HMM/@@download/ENCFF391HMM.bam GRCh38 released mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF202SNQ bam unfiltered alignments ENCSR283ZNI ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB8A-human ENCAB143NDO DNA False 2018-01-26 ENCODE 1 100 ENCFF438QQH, ENCFF643CGH, ENCFF933DHP 6937221364 ENCODE Processing Pipeline d5f4c334c6b72e0c7c308d064ee39992 https://www.encodeproject.org/files/ENCFF202SNQ/@@download/ENCFF202SNQ.bam GRCh38 released mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF650LSG bam unfiltered alignments ENCSR283ZNI ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB8A-human ENCAB143NDO DNA False 2018-01-26 ENCODE 1 100 ENCFF438QQH, ENCFF807MUK, ENCFF933DHP 6927984401 ENCODE Processing Pipeline f628c3d733894cabffead16fda69c8e0 https://www.encodeproject.org/files/ENCFF650LSG/@@download/ENCFF650LSG.bam hg19 released mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF104WBB bam alignments ENCSR283ZNI ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB8A-human ENCAB143NDO DNA False 2018-01-26 ENCODE 2 100 ENCFF522KRF, ENCFF643CGH, ENCFF891NFG 4387821908 ENCODE Processing Pipeline 54938d2540de66dbb7075c05ebf11d30 https://www.encodeproject.org/files/ENCFF104WBB/@@download/ENCFF104WBB.bam GRCh38 released mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF548ORK bam alignments ENCSR283ZNI ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB8A-human ENCAB143NDO DNA False 2018-01-26 ENCODE 2 100 ENCFF522KRF, ENCFF807MUK, ENCFF891NFG 4383020422 ENCODE Processing Pipeline f46db7792fc52f371b3837112b66a158 https://www.encodeproject.org/files/ENCFF548ORK/@@download/ENCFF548ORK.bam hg19 released mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF621SSO bam alignments ENCSR283ZNI ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB8A-human ENCAB143NDO DNA False 2018-01-26 ENCODE 1 100 ENCFF438QQH, ENCFF643CGH, ENCFF933DHP 5509266996 ENCODE Processing Pipeline 2ebd5b6e5c785d8410986e097b384567 https://www.encodeproject.org/files/ENCFF621SSO/@@download/ENCFF621SSO.bam GRCh38 released mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF607MTM bam alignments ENCSR283ZNI ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB8A-human ENCAB143NDO DNA False 2018-01-26 ENCODE 1 100 ENCFF438QQH, ENCFF807MUK, ENCFF933DHP 5504896896 ENCODE Processing Pipeline f6a9a63fe3229bc561cdc47e15f0bf0d https://www.encodeproject.org/files/ENCFF607MTM/@@download/ENCFF607MTM.bam hg19 released mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF370SGR bigWig signal p-value ENCSR283ZNI ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB8A-human ENCAB143NDO DNA False 2018-01-26 ENCODE 1 ENCFF160VXC, ENCFF607MTM, ENCFF834TUP 1604325694 ENCODE Processing Pipeline 25d4fad2a1dc0a5aded4ecb8a3eb2db5 https://www.encodeproject.org/files/ENCFF370SGR/@@download/ENCFF370SGR.bigWig hg19 released mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF114HMG bigWig signal p-value ENCSR283ZNI ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB8A-human ENCAB143NDO DNA False 2018-01-26 ENCODE 2 ENCFF548ORK, ENCFF834TUP 1124972536 ENCODE Processing Pipeline 88cef7025f87a655441e5896ed7a0070 https://www.encodeproject.org/files/ENCFF114HMG/@@download/ENCFF114HMG.bigWig hg19 released mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF329ZWA bigWig signal p-value ENCSR283ZNI ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB8A-human ENCAB143NDO DNA False 2018-01-26 ENCODE 1, 2 ENCFF160VXC, ENCFF548ORK, ENCFF607MTM, ENCFF834TUP 2373607336 ENCODE Processing Pipeline 06a54bbb571538f8addf3cb4594ec9df https://www.encodeproject.org/files/ENCFF329ZWA/@@download/ENCFF329ZWA.bigWig hg19 released mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF537VPU bigWig fold change over control ENCSR283ZNI ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB8A-human ENCAB143NDO DNA False 2018-01-26 ENCODE 1 ENCFF160VXC, ENCFF607MTM, ENCFF834TUP 1986159492 ENCODE Processing Pipeline 7d3eaa5361e1b7f492e32b110c90c521 https://www.encodeproject.org/files/ENCFF537VPU/@@download/ENCFF537VPU.bigWig hg19 released mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF839MRN bigWig fold change over control ENCSR283ZNI ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB8A-human ENCAB143NDO DNA False 2018-01-26 ENCODE 2 ENCFF548ORK, ENCFF834TUP 1407244661 ENCODE Processing Pipeline a6715d23d78f8248a93ade89981ef0b2 https://www.encodeproject.org/files/ENCFF839MRN/@@download/ENCFF839MRN.bigWig hg19 released mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF232LHF bigWig fold change over control ENCSR283ZNI ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB8A-human ENCAB143NDO DNA False 2018-01-26 ENCODE 1, 2 ENCFF160VXC, ENCFF548ORK, ENCFF607MTM, ENCFF834TUP 2504054910 ENCODE Processing Pipeline c074703b168df75005c93699d7c08b90 https://www.encodeproject.org/files/ENCFF232LHF/@@download/ENCFF232LHF.bigWig hg19 released mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF814OZQ bed narrowPeak peaks ENCSR283ZNI ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB8A-human ENCAB143NDO DNA False 2018-01-26 ENCODE 1 ENCFF160VXC, ENCFF607MTM, ENCFF834TUP 6965642 ENCODE Processing Pipeline 0718b01612a32df7f0c0beace60bd8e5 https://www.encodeproject.org/files/ENCFF814OZQ/@@download/ENCFF814OZQ.bed.gz hg19 released mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF020AOB bed narrowPeak peaks ENCSR283ZNI ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB8A-human ENCAB143NDO DNA False 2018-01-26 ENCODE 2 ENCFF548ORK, ENCFF834TUP 6509636 ENCODE Processing Pipeline f17aecc21850d6d815c28196a603ebca https://www.encodeproject.org/files/ENCFF020AOB/@@download/ENCFF020AOB.bed.gz hg19 released mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF400SXR bed narrowPeak peaks ENCSR283ZNI ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB8A-human ENCAB143NDO DNA False 2018-01-26 ENCODE 1, 2 ENCFF160VXC, ENCFF548ORK, ENCFF607MTM, ENCFF834TUP 7234307 ENCODE Processing Pipeline e6c978613342a8dfe04425ba52b872a3 https://www.encodeproject.org/files/ENCFF400SXR/@@download/ENCFF400SXR.bed.gz hg19 released mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF635RNS bigBed narrowPeak peaks ENCSR283ZNI ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB8A-human ENCAB143NDO DNA False 2018-01-26 ENCODE 1 ENCFF814OZQ 10960760 ENCODE Processing Pipeline c7e91bd1eb244f62cd2702d17d819710 https://www.encodeproject.org/files/ENCFF635RNS/@@download/ENCFF635RNS.bigBed hg19 released mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF402DQV bigBed narrowPeak peaks ENCSR283ZNI ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB8A-human ENCAB143NDO DNA False 2018-01-26 ENCODE 1, 2 ENCFF400SXR 11047535 ENCODE Processing Pipeline d9f86a016ed7ea08ea17794aafc1d5be https://www.encodeproject.org/files/ENCFF402DQV/@@download/ENCFF402DQV.bigBed hg19 released mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF575BHI bigBed narrowPeak peaks ENCSR283ZNI ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB8A-human ENCAB143NDO DNA False 2018-01-26 ENCODE 2 ENCFF020AOB 11280024 ENCODE Processing Pipeline e3d4a67ef234b21a2256404164ec5154 https://www.encodeproject.org/files/ENCFF575BHI/@@download/ENCFF575BHI.bigBed hg19 released mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF272SYI bigBed narrowPeak conservative idr thresholded peaks ENCSR283ZNI ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB8A-human ENCAB143NDO DNA False 2018-01-26 ENCODE 1, 2 ENCFF383KZY 91654 ENCODE Processing Pipeline 6212ec03ad109b195aa0d135a2eb43cf https://www.encodeproject.org/files/ENCFF272SYI/@@download/ENCFF272SYI.bigBed hg19 released mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF672VWD bigBed narrowPeak optimal idr thresholded peaks ENCSR283ZNI ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB8A-human ENCAB143NDO DNA False 2018-01-26 ENCODE 1, 2 ENCFF589EVD 96224 ENCODE Processing Pipeline a4f424607f10dbab40648b39bee4e9b0 https://www.encodeproject.org/files/ENCFF672VWD/@@download/ENCFF672VWD.bigBed hg19 released mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF383KZY bed narrowPeak conservative idr thresholded peaks ENCSR283ZNI ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB8A-human ENCAB143NDO DNA False 2018-01-26 ENCODE 1, 2 ENCFF001TDO, ENCFF020AOB, ENCFF400SXR, ENCFF814OZQ 11732 ENCODE Processing Pipeline bc7344ceaf9e912f6902a9dcac332baa https://www.encodeproject.org/files/ENCFF383KZY/@@download/ENCFF383KZY.bed.gz hg19 released mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF589EVD bed narrowPeak optimal idr thresholded peaks ENCSR283ZNI ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB8A-human ENCAB143NDO DNA False 2018-01-26 ENCODE 1, 2 ENCFF001TDO, ENCFF020AOB, ENCFF400SXR, ENCFF814OZQ 19154 ENCODE Processing Pipeline ec744580c8d5e3a55f5e1cc70aa5970c https://www.encodeproject.org/files/ENCFF589EVD/@@download/ENCFF589EVD.bed.gz hg19 released mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF843EUH bigWig signal p-value ENCSR283ZNI ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB8A-human ENCAB143NDO DNA False 2018-01-26 ENCODE 1 ENCFF621SSO 1639551331 ENCODE Processing Pipeline e159ac56489ad93b8a5672725e4a2bd5 https://www.encodeproject.org/files/ENCFF843EUH/@@download/ENCFF843EUH.bigWig GRCh38 released mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF497ZTT bigWig signal p-value ENCSR283ZNI ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB8A-human ENCAB143NDO DNA False 2018-01-26 ENCODE 2 ENCFF104WBB 1202431181 ENCODE Processing Pipeline c171a0b36497220942b488a2dc9d1bb1 https://www.encodeproject.org/files/ENCFF497ZTT/@@download/ENCFF497ZTT.bigWig GRCh38 released mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF568XXO bigWig signal p-value ENCSR283ZNI ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB8A-human ENCAB143NDO DNA False 2018-01-26 ENCODE 1, 2 ENCFF104WBB, ENCFF621SSO 2230018563 ENCODE Processing Pipeline 97e84b66a60e9687cde09cba994928fe https://www.encodeproject.org/files/ENCFF568XXO/@@download/ENCFF568XXO.bigWig GRCh38 released mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF564SAJ bigWig fold change over control ENCSR283ZNI ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB8A-human ENCAB143NDO DNA False 2018-01-26 ENCODE 1 ENCFF621SSO 1981929582 ENCODE Processing Pipeline 3a951b250c25939d66e1538592709d69 https://www.encodeproject.org/files/ENCFF564SAJ/@@download/ENCFF564SAJ.bigWig GRCh38 released mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF729CAN bigWig fold change over control ENCSR283ZNI ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB8A-human ENCAB143NDO DNA False 2018-01-26 ENCODE 2 ENCFF104WBB 1403684539 ENCODE Processing Pipeline 4e4f96258ef8d3646bb84da394936087 https://www.encodeproject.org/files/ENCFF729CAN/@@download/ENCFF729CAN.bigWig GRCh38 released mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF381GEM bigWig fold change over control ENCSR283ZNI ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB8A-human ENCAB143NDO DNA False 2018-01-26 ENCODE 1, 2 ENCFF104WBB, ENCFF621SSO 2499612725 ENCODE Processing Pipeline baa10e9f5287d53ff79c284473a364a8 https://www.encodeproject.org/files/ENCFF381GEM/@@download/ENCFF381GEM.bigWig GRCh38 released mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF150DPM bed narrowPeak peaks ENCSR283ZNI ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB8A-human ENCAB143NDO DNA False 2018-01-26 ENCODE 1 ENCFF621SSO 6889153 ENCODE Processing Pipeline 4050b3290ea6c99db7ad3980449e5413 https://www.encodeproject.org/files/ENCFF150DPM/@@download/ENCFF150DPM.bed.gz GRCh38 released mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF529XYW bed narrowPeak peaks ENCSR283ZNI ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB8A-human ENCAB143NDO DNA False 2018-01-26 ENCODE 2 ENCFF104WBB 6302811 ENCODE Processing Pipeline b6749ae5e0e10cac730b46ad783af45f https://www.encodeproject.org/files/ENCFF529XYW/@@download/ENCFF529XYW.bed.gz GRCh38 released mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF887JUG bigBed narrowPeak peaks ENCSR283ZNI ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB8A-human ENCAB143NDO DNA False 2018-01-26 ENCODE 1 ENCFF150DPM 10981647 ENCODE Processing Pipeline 12ccbc7fe5764008572f97bf9c148e30 https://www.encodeproject.org/files/ENCFF887JUG/@@download/ENCFF887JUG.bigBed GRCh38 released mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF202NFZ bed narrowPeak peaks ENCSR283ZNI ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB8A-human ENCAB143NDO DNA False 2018-01-26 ENCODE 1, 2 ENCFF104WBB, ENCFF621SSO 7216787 ENCODE Processing Pipeline 752454e49ef4c86cfe6f577c0d2752d3 https://www.encodeproject.org/files/ENCFF202NFZ/@@download/ENCFF202NFZ.bed.gz GRCh38 released mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF529ZVG bigBed narrowPeak peaks ENCSR283ZNI ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB8A-human ENCAB143NDO DNA False 2018-01-26 ENCODE 2 ENCFF529XYW 11301434 ENCODE Processing Pipeline 031a44b466ee807290f66d9509a82393 https://www.encodeproject.org/files/ENCFF529ZVG/@@download/ENCFF529ZVG.bigBed GRCh38 released mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF499ABA bigBed narrowPeak peaks ENCSR283ZNI ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB8A-human ENCAB143NDO DNA False 2018-01-26 ENCODE 1, 2 ENCFF202NFZ 11066048 ENCODE Processing Pipeline 4342289ef8e20f24ba4c43e862c1e98b https://www.encodeproject.org/files/ENCFF499ABA/@@download/ENCFF499ABA.bigBed GRCh38 released mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF399HPQ bigBed narrowPeak optimal idr thresholded peaks ENCSR283ZNI ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB8A-human ENCAB143NDO DNA False 2018-01-26 ENCODE 1, 2 ENCFF328SSL 97547 ENCODE Processing Pipeline 2b93add0239925f75f01ee0ebc4e0d86 https://www.encodeproject.org/files/ENCFF399HPQ/@@download/ENCFF399HPQ.bigBed GRCh38 released mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF583UGE bed narrowPeak conservative idr thresholded peaks ENCSR283ZNI ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB8A-human ENCAB143NDO DNA False 2018-01-26 ENCODE 1, 2 ENCFF150DPM, ENCFF202NFZ, ENCFF419RSJ, ENCFF529XYW 12398 ENCODE Processing Pipeline 6622dc51761fd083ac38f599c81ecbf4 https://www.encodeproject.org/files/ENCFF583UGE/@@download/ENCFF583UGE.bed.gz GRCh38 released mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF895FXW bigBed narrowPeak conservative idr thresholded peaks ENCSR283ZNI ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB8A-human ENCAB143NDO DNA False 2018-01-26 ENCODE 1, 2 ENCFF583UGE 95184 ENCODE Processing Pipeline 058b9dd56662c5c9e6ba227b14414081 https://www.encodeproject.org/files/ENCFF895FXW/@@download/ENCFF895FXW.bigBed GRCh38 released mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF328SSL bed narrowPeak optimal idr thresholded peaks ENCSR283ZNI ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB8A-human ENCAB143NDO DNA False 2018-01-26 ENCODE 1, 2 ENCFF150DPM, ENCFF202NFZ, ENCFF419RSJ, ENCFF529XYW 18840 ENCODE Processing Pipeline c3db005aa15a915ea55304faef8d8303 https://www.encodeproject.org/files/ENCFF328SSL/@@download/ENCFF328SSL.bed.gz GRCh38 released mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF197FBD bam unfiltered alignments ENCSR737LTZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MYNN-human ENCAB000BHV DNA False 2016-04-01 ENCODE 1 50 ENCFF142GQB, ENCFF807MUK 1334123947 ENCODE Processing Pipeline 196c0bd3aa2e8703868b836b5a5655df https://www.encodeproject.org/files/ENCFF197FBD/@@download/ENCFF197FBD.bam hg19 released low read depth, antibody characterized with exemption ENCFF160TKS bam unfiltered alignments ENCSR737LTZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MYNN-human ENCAB000BHV DNA False 2016-04-01 ENCODE 2 50 ENCFF796BOA, ENCFF807MUK 1450073814 ENCODE Processing Pipeline d65f293c097b48b81f462336cde6be49 https://www.encodeproject.org/files/ENCFF160TKS/@@download/ENCFF160TKS.bam hg19 released low read depth, antibody characterized with exemption ENCFF361PJU bed narrowPeak peaks ENCSR737LTZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MYNN-human ENCAB000BHV DNA False 2016-04-01 ENCODE 2 ENCFF023YMB, ENCFF272HDX 6155141 ENCODE Processing Pipeline 1ca260b3cf83a5a8f400fcef7aed5994 https://www.encodeproject.org/files/ENCFF361PJU/@@download/ENCFF361PJU.bed.gz hg19 released low read depth, antibody characterized with exemption ENCFF643XPE bed narrowPeak peaks ENCSR737LTZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MYNN-human ENCAB000BHV DNA False 2016-04-01 ENCODE 1, 2 ENCFF023YMB, ENCFF092ACZ, ENCFF272HDX, ENCFF487NQY 6874904 ENCODE Processing Pipeline b1cffbbf30f9768d1626b9eb63505d1d https://www.encodeproject.org/files/ENCFF643XPE/@@download/ENCFF643XPE.bed.gz hg19 released low read depth, antibody characterized with exemption ENCFF305WVO bigBed narrowPeak optimal idr thresholded peaks ENCSR737LTZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MYNN-human ENCAB000BHV DNA False 2016-04-01 ENCODE 1, 2 ENCFF583DZD 472297 ENCODE Processing Pipeline 82b85e933a0eadd3274a49b0f402947c https://www.encodeproject.org/files/ENCFF305WVO/@@download/ENCFF305WVO.bigBed hg19 released low read depth, antibody characterized with exemption ENCFF004MPD bed narrowPeak peaks ENCSR737LTZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MYNN-human ENCAB000BHV DNA False 2016-04-01 ENCODE 1 ENCFF092ACZ, ENCFF487NQY 5580912 ENCODE Processing Pipeline 4fae6b6b7a4a86df07b748b45c5ba3e8 https://www.encodeproject.org/files/ENCFF004MPD/@@download/ENCFF004MPD.bed.gz hg19 released low read depth, antibody characterized with exemption ENCFF513EWQ bigBed narrowPeak peaks ENCSR737LTZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MYNN-human ENCAB000BHV DNA False 2016-04-01 ENCODE 1 ENCFF004MPD 13177648 ENCODE Processing Pipeline 6e51cd9316d1a1af7f07839a52ae9b9b https://www.encodeproject.org/files/ENCFF513EWQ/@@download/ENCFF513EWQ.bigBed hg19 released low read depth, antibody characterized with exemption ENCFF002VRB bigBed narrowPeak peaks ENCSR737LTZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MYNN-human ENCAB000BHV DNA False 2016-04-01 ENCODE 2 ENCFF361PJU 13077785 ENCODE Processing Pipeline a0480c73c3afdde6282886681fed71c0 https://www.encodeproject.org/files/ENCFF002VRB/@@download/ENCFF002VRB.bigBed hg19 released low read depth, antibody characterized with exemption ENCFF341AHR bigBed narrowPeak peaks ENCSR737LTZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MYNN-human ENCAB000BHV DNA False 2016-04-01 ENCODE 1, 2 ENCFF643XPE 13159061 ENCODE Processing Pipeline 511b48f324f8c623984bf30231b3c7cb https://www.encodeproject.org/files/ENCFF341AHR/@@download/ENCFF341AHR.bigBed hg19 released low read depth, antibody characterized with exemption ENCFF795LBM bed narrowPeak conservative idr thresholded peaks ENCSR737LTZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MYNN-human ENCAB000BHV DNA False 2016-04-01 ENCODE 1, 2 ENCFF001TDO, ENCFF004MPD, ENCFF361PJU, ENCFF643XPE 194174 ENCODE Processing Pipeline 66c01b5058f9c814b2fe9fffa9c308c2 https://www.encodeproject.org/files/ENCFF795LBM/@@download/ENCFF795LBM.bed.gz hg19 released low read depth, antibody characterized with exemption ENCFF500GQE bigBed narrowPeak conservative idr thresholded peaks ENCSR737LTZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MYNN-human ENCAB000BHV DNA False 2016-04-01 ENCODE 1, 2 ENCFF795LBM 388407 ENCODE Processing Pipeline 08aa151bce1735c43b343e8bb170b98f https://www.encodeproject.org/files/ENCFF500GQE/@@download/ENCFF500GQE.bigBed hg19 released low read depth, antibody characterized with exemption ENCFF583DZD bed narrowPeak optimal idr thresholded peaks ENCSR737LTZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MYNN-human ENCAB000BHV DNA False 2016-04-01 ENCODE 1, 2 ENCFF001TDO, ENCFF004MPD, ENCFF361PJU, ENCFF643XPE 256420 ENCODE Processing Pipeline 6d801259152b94d89a2e782b987fca27 https://www.encodeproject.org/files/ENCFF583DZD/@@download/ENCFF583DZD.bed.gz hg19 released low read depth, antibody characterized with exemption ENCFF191QTF bigWig fold change over control ENCSR737LTZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MYNN-human ENCAB000BHV DNA False 2016-04-01 ENCODE 1 ENCFF092ACZ, ENCFF487NQY 459714069 ENCODE Processing Pipeline e9cf953e87d1aa467957e25900af5b67 https://www.encodeproject.org/files/ENCFF191QTF/@@download/ENCFF191QTF.bigWig hg19 released low read depth, antibody characterized with exemption ENCFF692BSB bigWig signal p-value ENCSR737LTZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MYNN-human ENCAB000BHV DNA False 2016-04-01 ENCODE 1 ENCFF092ACZ, ENCFF487NQY 541647944 ENCODE Processing Pipeline d79db6fc7492944fbcac115810349264 https://www.encodeproject.org/files/ENCFF692BSB/@@download/ENCFF692BSB.bigWig hg19 released low read depth, antibody characterized with exemption ENCFF796BOA fastq reads ENCSR737LTZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MYNN-human ENCAB000BHV DNA False 2016-04-01 ENCODE 2 1 50 single-ended 1358844703 Richard Myers, HAIB 20b8da5c2488aeeff91332bbe228fed6 SRA:SRR5339221 https://www.encodeproject.org/files/ENCFF796BOA/@@download/ENCFF796BOA.fastq.gz Illumina HiSeq 2000 /files/ENCFF002BGC/ released low read depth, antibody characterized with exemption ENCFF142GQB fastq reads ENCSR737LTZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MYNN-human ENCAB000BHV DNA False 2016-04-01 ENCODE 1 1 50 single-ended 1258325290 Richard Myers, HAIB 4a57c97f290a14ace0a4e2c368cd6385 SRA:SRR5339222 https://www.encodeproject.org/files/ENCFF142GQB/@@download/ENCFF142GQB.fastq.gz Illumina HiSeq 2000 /files/ENCFF002BGB/ released low read depth, antibody characterized with exemption ENCFF487NQY bam alignments ENCSR737LTZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MYNN-human ENCAB000BHV DNA False 2016-04-01 ENCODE 1 50 ENCFF142GQB, ENCFF807MUK 1009953701 ENCODE Processing Pipeline 2509ad9514586aad2df8f0f7be4a0ff7 https://www.encodeproject.org/files/ENCFF487NQY/@@download/ENCFF487NQY.bam hg19 released low read depth, antibody characterized with exemption ENCFF272HDX bam alignments ENCSR737LTZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MYNN-human ENCAB000BHV DNA False 2016-04-01 ENCODE 2 50 ENCFF796BOA, ENCFF807MUK 1111429634 ENCODE Processing Pipeline faa4f859dbcd90db520d89ca7ffd0a87 https://www.encodeproject.org/files/ENCFF272HDX/@@download/ENCFF272HDX.bam hg19 released low read depth, antibody characterized with exemption ENCFF869EZL bigWig signal p-value ENCSR737LTZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MYNN-human ENCAB000BHV DNA False 2016-04-01 ENCODE 1, 2 ENCFF023YMB, ENCFF092ACZ, ENCFF272HDX, ENCFF487NQY 1206754032 ENCODE Processing Pipeline 9807cfa1cc4432696fcd8fb97cca631e https://www.encodeproject.org/files/ENCFF869EZL/@@download/ENCFF869EZL.bigWig hg19 released low read depth, antibody characterized with exemption ENCFF798CQJ bigWig signal p-value ENCSR737LTZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MYNN-human ENCAB000BHV DNA False 2016-04-01 ENCODE 2 ENCFF023YMB, ENCFF272HDX 617209216 ENCODE Processing Pipeline e452d86bb369a41ec266848a9cc7ca15 https://www.encodeproject.org/files/ENCFF798CQJ/@@download/ENCFF798CQJ.bigWig hg19 released low read depth, antibody characterized with exemption ENCFF788TFX bigWig fold change over control ENCSR737LTZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MYNN-human ENCAB000BHV DNA False 2016-04-01 ENCODE 2 ENCFF023YMB, ENCFF272HDX 503319645 ENCODE Processing Pipeline 798f9c8d5ef34ff07fd0f16816fb9609 https://www.encodeproject.org/files/ENCFF788TFX/@@download/ENCFF788TFX.bigWig hg19 released low read depth, antibody characterized with exemption ENCFF145XHA bigWig fold change over control ENCSR737LTZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MYNN-human ENCAB000BHV DNA False 2016-04-01 ENCODE 1, 2 ENCFF023YMB, ENCFF092ACZ, ENCFF272HDX, ENCFF487NQY 1065968571 ENCODE Processing Pipeline 2183aab7d239db62adc4ad6e8f6cede3 https://www.encodeproject.org/files/ENCFF145XHA/@@download/ENCFF145XHA.bigWig hg19 released low read depth, antibody characterized with exemption ENCFF334LTA bam unfiltered alignments ENCSR737LTZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MYNN-human ENCAB000BHV DNA False 2016-04-01 ENCODE 1 50 ENCFF142GQB, ENCFF643CGH 1337687977 ENCODE Processing Pipeline 4398f0013af16f92a2d8aa38a556653d https://www.encodeproject.org/files/ENCFF334LTA/@@download/ENCFF334LTA.bam GRCh38 released low read depth, antibody characterized with exemption ENCFF542FVP bam unfiltered alignments ENCSR737LTZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MYNN-human ENCAB000BHV DNA False 2016-04-01 ENCODE 2 50 ENCFF643CGH, ENCFF796BOA 1452746504 ENCODE Processing Pipeline 54ae208db0a543dc8b0210b6d1ef6992 https://www.encodeproject.org/files/ENCFF542FVP/@@download/ENCFF542FVP.bam GRCh38 released low read depth, antibody characterized with exemption ENCFF179DZP bam alignments ENCSR737LTZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MYNN-human ENCAB000BHV DNA False 2016-04-01 ENCODE 1 50 ENCFF142GQB, ENCFF643CGH 1009499620 ENCODE Processing Pipeline 203e5b677d986af466c7c1aa5b23528e https://www.encodeproject.org/files/ENCFF179DZP/@@download/ENCFF179DZP.bam GRCh38 released low read depth, antibody characterized with exemption ENCFF022IWG bam alignments ENCSR737LTZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MYNN-human ENCAB000BHV DNA False 2016-04-01 ENCODE 2 50 ENCFF643CGH, ENCFF796BOA 1110930941 ENCODE Processing Pipeline 2d7b6ff4a50d0ca7899669eace8ef953 https://www.encodeproject.org/files/ENCFF022IWG/@@download/ENCFF022IWG.bam GRCh38 released low read depth, antibody characterized with exemption ENCFF530JRK bigWig signal p-value ENCSR737LTZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MYNN-human ENCAB000BHV DNA False 2016-04-01 ENCODE 1 ENCFF179DZP, ENCFF285EWB 609496334 ENCODE Processing Pipeline 989ff52eaeed5fa6ec1e7e96f5e4e72a https://www.encodeproject.org/files/ENCFF530JRK/@@download/ENCFF530JRK.bigWig GRCh38 released low read depth, antibody characterized with exemption ENCFF802ZEI bigWig signal p-value ENCSR737LTZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MYNN-human ENCAB000BHV DNA False 2016-04-01 ENCODE 2 ENCFF022IWG, ENCFF709XAA 576816595 ENCODE Processing Pipeline 7e640b9ab25b345329e38b5bb978387a https://www.encodeproject.org/files/ENCFF802ZEI/@@download/ENCFF802ZEI.bigWig GRCh38 released low read depth, antibody characterized with exemption ENCFF444QFG bigWig signal p-value ENCSR737LTZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MYNN-human ENCAB000BHV DNA False 2016-04-01 ENCODE 1, 2 ENCFF022IWG, ENCFF179DZP, ENCFF285EWB, ENCFF709XAA 1168088718 ENCODE Processing Pipeline 6f919c958fe3ef8e7917b2ad8cf95f93 https://www.encodeproject.org/files/ENCFF444QFG/@@download/ENCFF444QFG.bigWig GRCh38 released low read depth, antibody characterized with exemption ENCFF590KRO bigWig fold change over control ENCSR737LTZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MYNN-human ENCAB000BHV DNA False 2016-04-01 ENCODE 1 ENCFF179DZP, ENCFF285EWB 457540907 ENCODE Processing Pipeline 49dc06c82051414cef349053a78eed36 https://www.encodeproject.org/files/ENCFF590KRO/@@download/ENCFF590KRO.bigWig GRCh38 released low read depth, antibody characterized with exemption ENCFF221HDL bigWig fold change over control ENCSR737LTZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MYNN-human ENCAB000BHV DNA False 2016-04-01 ENCODE 2 ENCFF022IWG, ENCFF709XAA 519820430 ENCODE Processing Pipeline 0418cd17ed4ba2ce60696b0d0dd49ddb https://www.encodeproject.org/files/ENCFF221HDL/@@download/ENCFF221HDL.bigWig GRCh38 released low read depth, antibody characterized with exemption ENCFF169IXM bigWig fold change over control ENCSR737LTZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MYNN-human ENCAB000BHV DNA False 2016-04-01 ENCODE 1, 2 ENCFF022IWG, ENCFF179DZP, ENCFF285EWB, ENCFF709XAA 1063890589 ENCODE Processing Pipeline fe70be4d4121862dc5de037aa9b00c49 https://www.encodeproject.org/files/ENCFF169IXM/@@download/ENCFF169IXM.bigWig GRCh38 released low read depth, antibody characterized with exemption ENCFF012VEN bed narrowPeak peaks ENCSR737LTZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MYNN-human ENCAB000BHV DNA False 2016-04-01 ENCODE 1 ENCFF179DZP, ENCFF285EWB 5575038 ENCODE Processing Pipeline a0da133bb02c909a59365e9c0fb5b1c6 https://www.encodeproject.org/files/ENCFF012VEN/@@download/ENCFF012VEN.bed.gz GRCh38 released low read depth, antibody characterized with exemption ENCFF912NOY bigBed narrowPeak peaks ENCSR737LTZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MYNN-human ENCAB000BHV DNA False 2016-04-01 ENCODE 1 ENCFF012VEN 13177542 ENCODE Processing Pipeline 3ccb8844ad3da7a20ee072fcfa909eae https://www.encodeproject.org/files/ENCFF912NOY/@@download/ENCFF912NOY.bigBed GRCh38 released low read depth, antibody characterized with exemption ENCFF616ZNS bed narrowPeak peaks ENCSR737LTZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MYNN-human ENCAB000BHV DNA False 2016-04-01 ENCODE 2 ENCFF022IWG, ENCFF709XAA 6154120 ENCODE Processing Pipeline 401c8e3130f974f39b62190bbd35b252 https://www.encodeproject.org/files/ENCFF616ZNS/@@download/ENCFF616ZNS.bed.gz GRCh38 released low read depth, antibody characterized with exemption ENCFF749TXQ bed narrowPeak peaks ENCSR737LTZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MYNN-human ENCAB000BHV DNA False 2016-04-01 ENCODE 1, 2 ENCFF022IWG, ENCFF179DZP, ENCFF285EWB, ENCFF709XAA 6839954 ENCODE Processing Pipeline 440dd0736e75bd9626047af766d381a7 https://www.encodeproject.org/files/ENCFF749TXQ/@@download/ENCFF749TXQ.bed.gz GRCh38 released low read depth, antibody characterized with exemption ENCFF652WXM bigBed narrowPeak peaks ENCSR737LTZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MYNN-human ENCAB000BHV DNA False 2016-04-01 ENCODE 2 ENCFF616ZNS 13080977 ENCODE Processing Pipeline ae1204ef8ff9ac9fb94507e2b7dcdd61 https://www.encodeproject.org/files/ENCFF652WXM/@@download/ENCFF652WXM.bigBed GRCh38 released low read depth, antibody characterized with exemption ENCFF915HPN bigBed narrowPeak peaks ENCSR737LTZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MYNN-human ENCAB000BHV DNA False 2016-04-01 ENCODE 1, 2 ENCFF749TXQ 13153933 ENCODE Processing Pipeline 292d59f428f81ef89fe68c87a07b2335 https://www.encodeproject.org/files/ENCFF915HPN/@@download/ENCFF915HPN.bigBed GRCh38 released low read depth, antibody characterized with exemption ENCFF416YED bigBed narrowPeak optimal idr thresholded peaks ENCSR737LTZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MYNN-human ENCAB000BHV DNA False 2016-04-01 ENCODE 1, 2 ENCFF272LLG 480593 ENCODE Processing Pipeline ce8572a36f11f88750b189c0450316a8 https://www.encodeproject.org/files/ENCFF416YED/@@download/ENCFF416YED.bigBed GRCh38 released low read depth, antibody characterized with exemption ENCFF423GUZ bed narrowPeak conservative idr thresholded peaks ENCSR737LTZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MYNN-human ENCAB000BHV DNA False 2016-04-01 ENCODE 1, 2 ENCFF012VEN, ENCFF419RSJ, ENCFF616ZNS, ENCFF749TXQ 194393 ENCODE Processing Pipeline 2d026b202d227201c41b84d65b209702 https://www.encodeproject.org/files/ENCFF423GUZ/@@download/ENCFF423GUZ.bed.gz GRCh38 released low read depth, antibody characterized with exemption ENCFF712PYE bigBed narrowPeak conservative idr thresholded peaks ENCSR737LTZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MYNN-human ENCAB000BHV DNA False 2016-04-01 ENCODE 1, 2 ENCFF423GUZ 389797 ENCODE Processing Pipeline b7cf025520e2c3a09d5634f9b2409b75 https://www.encodeproject.org/files/ENCFF712PYE/@@download/ENCFF712PYE.bigBed GRCh38 released low read depth, antibody characterized with exemption ENCFF272LLG bed narrowPeak optimal idr thresholded peaks ENCSR737LTZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MYNN-human ENCAB000BHV DNA False 2016-04-01 ENCODE 1, 2 ENCFF012VEN, ENCFF419RSJ, ENCFF616ZNS, ENCFF749TXQ 262233 ENCODE Processing Pipeline ef8ff622f37beebd0ba43150fe879b82 https://www.encodeproject.org/files/ENCFF272LLG/@@download/ENCFF272LLG.bed.gz GRCh38 released low read depth, antibody characterized with exemption ENCFF539KTK bam unfiltered alignments ENCSR957LDM ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM24-human ENCAB680SMX DNA False 2016-09-27 ENCODE 2 100 ENCFF150KRT, ENCFF807MUK, ENCFF983NMP 5298355212 ENCODE Processing Pipeline f9f12724acecf7d755c02d6385b91a7e https://www.encodeproject.org/files/ENCFF539KTK/@@download/ENCFF539KTK.bam hg19 released low read depth ENCFF983NMP fastq reads ENCSR957LDM ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM24-human ENCAB680SMX DNA False 2016-09-27 ENCODE 2 1 100 paired-ended 1 ENCFF150KRT 2456903925 Michael Snyder, Stanford 7ee3a5694aa3efbee7bb30551bc84ee5 SRA:SRR5112316 https://www.encodeproject.org/files/ENCFF983NMP/@@download/ENCFF983NMP.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFD/ released low read depth ENCFF150KRT fastq reads ENCSR957LDM ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM24-human ENCAB680SMX DNA False 2016-09-27 ENCODE 2 1 100 paired-ended 2 ENCFF983NMP 2432910501 Michael Snyder, Stanford 9a67436920e1a3186929716d64c634f5 SRA:SRR5112316 https://www.encodeproject.org/files/ENCFF150KRT/@@download/ENCFF150KRT.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFA/ released low read depth ENCFF222XNY bam alignments ENCSR957LDM ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM24-human ENCAB680SMX DNA False 2016-09-27 ENCODE 2 ENCFF150KRT, ENCFF807MUK, ENCFF983NMP 4394540487 ENCODE Processing Pipeline c6ab8e2c0382e85b7f40bcaee215deaf https://www.encodeproject.org/files/ENCFF222XNY/@@download/ENCFF222XNY.bam hg19 released low read depth ENCFF567LMF fastq reads ENCSR957LDM ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM24-human ENCAB680SMX DNA False 2016-09-27 ENCODE 1 1 100 paired-ended 2 ENCFF112ZYY 1997211657 Michael Snyder, Stanford 87327068f93c2ea72c929e388900b5b9 SRA:SRR5112315 https://www.encodeproject.org/files/ENCFF567LMF/@@download/ENCFF567LMF.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFH/ released low read depth ENCFF112ZYY fastq reads ENCSR957LDM ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM24-human ENCAB680SMX DNA False 2016-09-27 ENCODE 1 1 100 paired-ended 1 ENCFF567LMF 2010563795 Michael Snyder, Stanford 769ea519bcabb23b4a02ba92a215e6c8 SRA:SRR5112315 https://www.encodeproject.org/files/ENCFF112ZYY/@@download/ENCFF112ZYY.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFF/ released low read depth ENCFF185COP bam unfiltered alignments ENCSR957LDM ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM24-human ENCAB680SMX DNA False 2016-09-27 ENCODE 2 100 ENCFF150KRT, ENCFF643CGH, ENCFF983NMP 5302284645 ENCODE Processing Pipeline ac47919caa7ba4c7a045e1e6c7bfd519 https://www.encodeproject.org/files/ENCFF185COP/@@download/ENCFF185COP.bam GRCh38 released low read depth ENCFF910SML bam unfiltered alignments ENCSR957LDM ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM24-human ENCAB680SMX DNA False 2016-09-27 ENCODE 1 100 ENCFF112ZYY, ENCFF567LMF, ENCFF807MUK 4380697620 ENCODE Processing Pipeline 83c615db7a0037ff6c0d59f0ee69e9f9 https://www.encodeproject.org/files/ENCFF910SML/@@download/ENCFF910SML.bam hg19 released low read depth ENCFF733UEY bam unfiltered alignments ENCSR957LDM ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM24-human ENCAB680SMX DNA False 2016-09-27 ENCODE 1 100 ENCFF112ZYY, ENCFF567LMF, ENCFF643CGH 4384305777 ENCODE Processing Pipeline 5b6da1fe47d0bfb87749d4f5ae9cb659 https://www.encodeproject.org/files/ENCFF733UEY/@@download/ENCFF733UEY.bam GRCh38 released low read depth ENCFF079SPF bam alignments ENCSR957LDM ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM24-human ENCAB680SMX DNA False 2016-09-27 ENCODE 1 100 ENCFF112ZYY, ENCFF567LMF, ENCFF643CGH 3657861769 ENCODE Processing Pipeline 4b40ac83fce8751438c212e5c994a836 https://www.encodeproject.org/files/ENCFF079SPF/@@download/ENCFF079SPF.bam GRCh38 released low read depth ENCFF738QLQ bam alignments ENCSR957LDM ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM24-human ENCAB680SMX DNA False 2016-09-27 ENCODE 2 100 ENCFF150KRT, ENCFF643CGH, ENCFF983NMP 4395963823 ENCODE Processing Pipeline f17219ff3f8dddea7165424b402879a8 https://www.encodeproject.org/files/ENCFF738QLQ/@@download/ENCFF738QLQ.bam GRCh38 released low read depth ENCFF880NAD bam alignments ENCSR957LDM ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM24-human ENCAB680SMX DNA False 2016-09-27 ENCODE 1 100 ENCFF112ZYY, ENCFF567LMF, ENCFF807MUK 3656437678 ENCODE Processing Pipeline 6f933604ee9fd15c5029f91d43f38bb3 https://www.encodeproject.org/files/ENCFF880NAD/@@download/ENCFF880NAD.bam hg19 released low read depth ENCFF691DEF bigWig signal p-value ENCSR957LDM ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM24-human ENCAB680SMX DNA False 2016-09-27 ENCODE 2 ENCFF051LWI, ENCFF222XNY 1151558318 ENCODE Processing Pipeline c235178452ada558a0de334b4b7505e0 https://www.encodeproject.org/files/ENCFF691DEF/@@download/ENCFF691DEF.bigWig hg19 released low read depth ENCFF948QZD bigWig signal p-value ENCSR957LDM ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM24-human ENCAB680SMX DNA False 2016-09-27 ENCODE 1 ENCFF581ZJL, ENCFF880NAD 1131280160 ENCODE Processing Pipeline 64e22753e78ec7da7f05e61feb80f01c https://www.encodeproject.org/files/ENCFF948QZD/@@download/ENCFF948QZD.bigWig hg19 released low read depth ENCFF431DNF bigWig signal p-value ENCSR957LDM ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM24-human ENCAB680SMX DNA False 2016-09-27 ENCODE 1, 2 ENCFF051LWI, ENCFF222XNY, ENCFF581ZJL, ENCFF880NAD 1960028006 ENCODE Processing Pipeline 7ff54719e9bd045e80cb31e2d1a6c6e6 https://www.encodeproject.org/files/ENCFF431DNF/@@download/ENCFF431DNF.bigWig hg19 released low read depth ENCFF382KQX bigWig fold change over control ENCSR957LDM ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM24-human ENCAB680SMX DNA False 2016-09-27 ENCODE 1 ENCFF581ZJL, ENCFF880NAD 1072338100 ENCODE Processing Pipeline 819927d55703632cc53eb9a8da3471e4 https://www.encodeproject.org/files/ENCFF382KQX/@@download/ENCFF382KQX.bigWig hg19 released low read depth ENCFF367VKM bigWig fold change over control ENCSR957LDM ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM24-human ENCAB680SMX DNA False 2016-09-27 ENCODE 2 ENCFF051LWI, ENCFF222XNY 1127881513 ENCODE Processing Pipeline 0007d644b1c36567903423bd56c99d95 https://www.encodeproject.org/files/ENCFF367VKM/@@download/ENCFF367VKM.bigWig hg19 released low read depth ENCFF282HZD bigWig fold change over control ENCSR957LDM ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM24-human ENCAB680SMX DNA False 2016-09-27 ENCODE 1, 2 ENCFF051LWI, ENCFF222XNY, ENCFF581ZJL, ENCFF880NAD 2051480563 ENCODE Processing Pipeline 307130e2b756edcaa36f4f92a9926a5a https://www.encodeproject.org/files/ENCFF282HZD/@@download/ENCFF282HZD.bigWig hg19 released low read depth ENCFF261OOY bed narrowPeak peaks ENCSR957LDM ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM24-human ENCAB680SMX DNA False 2016-09-27 ENCODE 1 ENCFF581ZJL, ENCFF880NAD 6789096 ENCODE Processing Pipeline e743490d7df20591f455f87097e4306e https://www.encodeproject.org/files/ENCFF261OOY/@@download/ENCFF261OOY.bed.gz hg19 released low read depth ENCFF303OST bed narrowPeak peaks ENCSR957LDM ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM24-human ENCAB680SMX DNA False 2016-09-27 ENCODE 2 ENCFF051LWI, ENCFF222XNY 6744989 ENCODE Processing Pipeline cdfc6e5c799192f140ca4b3d9f0347cc https://www.encodeproject.org/files/ENCFF303OST/@@download/ENCFF303OST.bed.gz hg19 released low read depth ENCFF121KKJ bed narrowPeak peaks ENCSR957LDM ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM24-human ENCAB680SMX DNA False 2016-09-27 ENCODE 1, 2 ENCFF051LWI, ENCFF222XNY, ENCFF581ZJL, ENCFF880NAD 7245731 ENCODE Processing Pipeline e7a3c665f0be890bf5ebbc1b4c449bcb https://www.encodeproject.org/files/ENCFF121KKJ/@@download/ENCFF121KKJ.bed.gz hg19 released low read depth ENCFF716SGL bigBed narrowPeak peaks ENCSR957LDM ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM24-human ENCAB680SMX DNA False 2016-09-27 ENCODE 2 ENCFF303OST 13333925 ENCODE Processing Pipeline 8608e1da0fb077ca44167c7437409c2f https://www.encodeproject.org/files/ENCFF716SGL/@@download/ENCFF716SGL.bigBed hg19 released low read depth ENCFF484GNO bigBed narrowPeak peaks ENCSR957LDM ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM24-human ENCAB680SMX DNA False 2016-09-27 ENCODE 1 ENCFF261OOY 13190507 ENCODE Processing Pipeline 855ceaae6dd261f32aeeee07c34f4d5a https://www.encodeproject.org/files/ENCFF484GNO/@@download/ENCFF484GNO.bigBed hg19 released low read depth ENCFF877XUZ bigBed narrowPeak peaks ENCSR957LDM ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM24-human ENCAB680SMX DNA False 2016-09-27 ENCODE 1, 2 ENCFF121KKJ 13161869 ENCODE Processing Pipeline 0137d629e6dcaa6ffd1d82659d316991 https://www.encodeproject.org/files/ENCFF877XUZ/@@download/ENCFF877XUZ.bigBed hg19 released low read depth ENCFF549QFS bigBed narrowPeak conservative idr thresholded peaks ENCSR957LDM ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM24-human ENCAB680SMX DNA False 2016-09-27 ENCODE 1, 2 ENCFF608XIU 505663 ENCODE Processing Pipeline b2056482a4090c425eafd89d6e04027d https://www.encodeproject.org/files/ENCFF549QFS/@@download/ENCFF549QFS.bigBed hg19 released low read depth ENCFF608XIU bed narrowPeak conservative idr thresholded peaks ENCSR957LDM ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM24-human ENCAB680SMX DNA False 2016-09-27 ENCODE 1, 2 ENCFF001TDO, ENCFF121KKJ, ENCFF261OOY, ENCFF303OST 256896 ENCODE Processing Pipeline f01a481112333050d21fca16938e7d2a https://www.encodeproject.org/files/ENCFF608XIU/@@download/ENCFF608XIU.bed.gz hg19 released low read depth ENCFF049CRW bed narrowPeak optimal idr thresholded peaks ENCSR957LDM ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM24-human ENCAB680SMX DNA False 2016-09-27 ENCODE 1, 2 ENCFF001TDO, ENCFF121KKJ, ENCFF261OOY, ENCFF303OST 364868 ENCODE Processing Pipeline 365d731ad998698c1878c914037ef74d https://www.encodeproject.org/files/ENCFF049CRW/@@download/ENCFF049CRW.bed.gz hg19 released low read depth ENCFF585ZKO bigBed narrowPeak optimal idr thresholded peaks ENCSR957LDM ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM24-human ENCAB680SMX DNA False 2016-09-27 ENCODE 1, 2 ENCFF049CRW 804466 ENCODE Processing Pipeline fe4830ca9e9c56a8a7a43e6a1ee64d9a https://www.encodeproject.org/files/ENCFF585ZKO/@@download/ENCFF585ZKO.bigBed hg19 released low read depth ENCFF421BQO bigWig signal p-value ENCSR957LDM ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM24-human ENCAB680SMX DNA False 2016-09-27 ENCODE 1 ENCFF079SPF, ENCFF910IKB 1200876977 ENCODE Processing Pipeline 3f94557cc0794630946030f504ccd7ff https://www.encodeproject.org/files/ENCFF421BQO/@@download/ENCFF421BQO.bigWig GRCh38 released low read depth ENCFF234TYY bigWig signal p-value ENCSR957LDM ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM24-human ENCAB680SMX DNA False 2016-09-27 ENCODE 2 ENCFF227IZS, ENCFF738QLQ 936172037 ENCODE Processing Pipeline a88eabc805f39716501452d002fe2ae9 https://www.encodeproject.org/files/ENCFF234TYY/@@download/ENCFF234TYY.bigWig GRCh38 released low read depth ENCFF767BCZ bigWig signal p-value ENCSR957LDM ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM24-human ENCAB680SMX DNA False 2016-09-27 ENCODE 1, 2 ENCFF079SPF, ENCFF227IZS, ENCFF738QLQ, ENCFF910IKB 1866939162 ENCODE Processing Pipeline 8d24dbf590fc236111255deaec56b02e https://www.encodeproject.org/files/ENCFF767BCZ/@@download/ENCFF767BCZ.bigWig GRCh38 released low read depth ENCFF404BME bigWig fold change over control ENCSR957LDM ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM24-human ENCAB680SMX DNA False 2016-09-27 ENCODE 1 ENCFF079SPF, ENCFF910IKB 1068950436 ENCODE Processing Pipeline d26475ff555dbc3717d968bb764e1cc8 https://www.encodeproject.org/files/ENCFF404BME/@@download/ENCFF404BME.bigWig GRCh38 released low read depth ENCFF858XPT bigWig fold change over control ENCSR957LDM ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM24-human ENCAB680SMX DNA False 2016-09-27 ENCODE 2 ENCFF227IZS, ENCFF738QLQ 1130420238 ENCODE Processing Pipeline 028b323c51e80161930a66fc94743a5d https://www.encodeproject.org/files/ENCFF858XPT/@@download/ENCFF858XPT.bigWig GRCh38 released low read depth ENCFF792FZX bigWig fold change over control ENCSR957LDM ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM24-human ENCAB680SMX DNA False 2016-09-27 ENCODE 1, 2 ENCFF079SPF, ENCFF227IZS, ENCFF738QLQ, ENCFF910IKB 2067899964 ENCODE Processing Pipeline 6ecb0b41c8e9f9d596137ea6af0edc7e https://www.encodeproject.org/files/ENCFF792FZX/@@download/ENCFF792FZX.bigWig GRCh38 released low read depth ENCFF227UBK bed narrowPeak peaks ENCSR957LDM ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM24-human ENCAB680SMX DNA False 2016-09-27 ENCODE 1 ENCFF079SPF, ENCFF910IKB 6726204 ENCODE Processing Pipeline bee76617ba767b38019fbc121fb22151 https://www.encodeproject.org/files/ENCFF227UBK/@@download/ENCFF227UBK.bed.gz GRCh38 released low read depth ENCFF668TXD bigBed narrowPeak peaks ENCSR957LDM ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM24-human ENCAB680SMX DNA False 2016-09-27 ENCODE 2 ENCFF382EKG 13340380 ENCODE Processing Pipeline cc152684e8de6d4d31fdc10f4c9fe2da https://www.encodeproject.org/files/ENCFF668TXD/@@download/ENCFF668TXD.bigBed GRCh38 released low read depth ENCFF382EKG bed narrowPeak peaks ENCSR957LDM ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM24-human ENCAB680SMX DNA False 2016-09-27 ENCODE 2 ENCFF227IZS, ENCFF738QLQ 6620263 ENCODE Processing Pipeline bbad40f9dd3e8612040226f035b26b81 https://www.encodeproject.org/files/ENCFF382EKG/@@download/ENCFF382EKG.bed.gz GRCh38 released low read depth ENCFF720KEL bed narrowPeak peaks ENCSR957LDM ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM24-human ENCAB680SMX DNA False 2016-09-27 ENCODE 1, 2 ENCFF079SPF, ENCFF227IZS, ENCFF738QLQ, ENCFF910IKB 7236012 ENCODE Processing Pipeline f2c77749ceb2dd4cc3bd3c65d944c878 https://www.encodeproject.org/files/ENCFF720KEL/@@download/ENCFF720KEL.bed.gz GRCh38 released low read depth ENCFF610UHE bigBed narrowPeak peaks ENCSR957LDM ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM24-human ENCAB680SMX DNA False 2016-09-27 ENCODE 1 ENCFF227UBK 13217941 ENCODE Processing Pipeline 60e90e1c7fddf5f6d28a57f20cbecff5 https://www.encodeproject.org/files/ENCFF610UHE/@@download/ENCFF610UHE.bigBed GRCh38 released low read depth ENCFF129XAS bigBed narrowPeak peaks ENCSR957LDM ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM24-human ENCAB680SMX DNA False 2016-09-27 ENCODE 1, 2 ENCFF720KEL 13169385 ENCODE Processing Pipeline 2177e74796e4704f64ec4409bb2d6e54 https://www.encodeproject.org/files/ENCFF129XAS/@@download/ENCFF129XAS.bigBed GRCh38 released low read depth ENCFF950TOJ bed narrowPeak optimal idr thresholded peaks ENCSR957LDM ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM24-human ENCAB680SMX DNA False 2016-09-27 ENCODE 1, 2 ENCFF227UBK, ENCFF382EKG, ENCFF419RSJ, ENCFF720KEL 369995 ENCODE Processing Pipeline 10336ca13796bd6de0efef8d3ed56c0e https://www.encodeproject.org/files/ENCFF950TOJ/@@download/ENCFF950TOJ.bed.gz GRCh38 released low read depth ENCFF483ILL bigBed narrowPeak conservative idr thresholded peaks ENCSR957LDM ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM24-human ENCAB680SMX DNA False 2016-09-27 ENCODE 1, 2 ENCFF857AXB 511055 ENCODE Processing Pipeline 4b177c44a286b3bc2a46d111e07e5041 https://www.encodeproject.org/files/ENCFF483ILL/@@download/ENCFF483ILL.bigBed GRCh38 released low read depth ENCFF857AXB bed narrowPeak conservative idr thresholded peaks ENCSR957LDM ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM24-human ENCAB680SMX DNA False 2016-09-27 ENCODE 1, 2 ENCFF227UBK, ENCFF382EKG, ENCFF419RSJ, ENCFF720KEL 258667 ENCODE Processing Pipeline 230ff7a71ccd06daa57122123d4550da https://www.encodeproject.org/files/ENCFF857AXB/@@download/ENCFF857AXB.bed.gz GRCh38 released low read depth ENCFF812VCP bigBed narrowPeak optimal idr thresholded peaks ENCSR957LDM ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM24-human ENCAB680SMX DNA False 2016-09-27 ENCODE 1, 2 ENCFF950TOJ 816683 ENCODE Processing Pipeline 3e7761c378e126566884c82c02f6fd44 https://www.encodeproject.org/files/ENCFF812VCP/@@download/ENCFF812VCP.bigBed GRCh38 released low read depth ENCFF039TRC bam unfiltered alignments ENCSR336DXE ChIP-seq EFO:0002067 K562 cell line Homo sapiens SKIL-human ENCAB000BNW DNA False 2017-06-29 ENCODE 2 100 ENCFF310DAJ, ENCFF493LNW, ENCFF807MUK 6889152586 ENCODE Processing Pipeline 6ea9f5ac1978b9b83f0f1f82b420f498 https://www.encodeproject.org/files/ENCFF039TRC/@@download/ENCFF039TRC.bam hg19 released mild to moderate bottlenecking ENCFF406EZR bam unfiltered alignments ENCSR336DXE ChIP-seq EFO:0002067 K562 cell line Homo sapiens SKIL-human ENCAB000BNW DNA False 2017-06-29 ENCODE 3 100 ENCFF138KRI, ENCFF411JNO, ENCFF807MUK 5666892343 ENCODE Processing Pipeline 8a37c5d14569a45789b586740226a38f https://www.encodeproject.org/files/ENCFF406EZR/@@download/ENCFF406EZR.bam hg19 released mild to moderate bottlenecking ENCFF493LNW fastq reads ENCSR336DXE ChIP-seq EFO:0002067 K562 cell line Homo sapiens SKIL-human ENCAB000BNW DNA False 2017-06-29 ENCODE 2 1 100 paired-ended 1 ENCFF310DAJ 3238680932 Michael Snyder, Stanford 937a2ff98eb1776070ec69779b0a3bb2 SRA:SRR6213235 https://www.encodeproject.org/files/ENCFF493LNW/@@download/ENCFF493LNW.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFD/ released mild to moderate bottlenecking ENCFF411JNO fastq reads ENCSR336DXE ChIP-seq EFO:0002067 K562 cell line Homo sapiens SKIL-human ENCAB000BNW DNA False 2017-06-29 ENCODE 3 1 100 paired-ended 1 ENCFF138KRI 2669451483 Michael Snyder, Stanford 49836338f712a05915c1d0c94fd513e5 SRA:SRR6213234 https://www.encodeproject.org/files/ENCFF411JNO/@@download/ENCFF411JNO.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFF/ released mild to moderate bottlenecking ENCFF310DAJ fastq reads ENCSR336DXE ChIP-seq EFO:0002067 K562 cell line Homo sapiens SKIL-human ENCAB000BNW DNA False 2017-06-29 ENCODE 2 1 100 paired-ended 2 ENCFF493LNW 3278510218 Michael Snyder, Stanford 01cfa70daacf17dcf3a9e64e79cb2897 SRA:SRR6213235 https://www.encodeproject.org/files/ENCFF310DAJ/@@download/ENCFF310DAJ.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFA/ released mild to moderate bottlenecking ENCFF138KRI fastq reads ENCSR336DXE ChIP-seq EFO:0002067 K562 cell line Homo sapiens SKIL-human ENCAB000BNW DNA False 2017-06-29 ENCODE 3 1 100 paired-ended 2 ENCFF411JNO 2681733281 Michael Snyder, Stanford b71fd209033269a61892aba9f34498a0 SRA:SRR6213234 https://www.encodeproject.org/files/ENCFF138KRI/@@download/ENCFF138KRI.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFH/ released mild to moderate bottlenecking ENCFF464SZU bam alignments ENCSR336DXE ChIP-seq EFO:0002067 K562 cell line Homo sapiens SKIL-human ENCAB000BNW DNA False 2017-06-29 ENCODE 3 100 ENCFF138KRI, ENCFF411JNO, ENCFF807MUK 4679520197 ENCODE Processing Pipeline 9378e5423e4fd923be35d69cd1ba7423 https://www.encodeproject.org/files/ENCFF464SZU/@@download/ENCFF464SZU.bam hg19 released mild to moderate bottlenecking ENCFF010OCL bam alignments ENCSR336DXE ChIP-seq EFO:0002067 K562 cell line Homo sapiens SKIL-human ENCAB000BNW DNA False 2017-06-29 ENCODE 2 100 ENCFF310DAJ, ENCFF493LNW, ENCFF807MUK 5634850788 ENCODE Processing Pipeline 49406b43b63b5535e194b52450912ec4 https://www.encodeproject.org/files/ENCFF010OCL/@@download/ENCFF010OCL.bam hg19 released mild to moderate bottlenecking ENCFF705JLG bigWig signal p-value ENCSR336DXE ChIP-seq EFO:0002067 K562 cell line Homo sapiens SKIL-human ENCAB000BNW DNA False 2017-06-29 ENCODE 2 ENCFF010OCL, ENCFF051LWI 1161078449 ENCODE Processing Pipeline bb9889bf0e9a44eb6c078596db6ca188 https://www.encodeproject.org/files/ENCFF705JLG/@@download/ENCFF705JLG.bigWig hg19 released mild to moderate bottlenecking ENCFF052VUA bigWig signal p-value ENCSR336DXE ChIP-seq EFO:0002067 K562 cell line Homo sapiens SKIL-human ENCAB000BNW DNA False 2017-06-29 ENCODE 3 ENCFF464SZU, ENCFF581ZJL 1097857671 ENCODE Processing Pipeline 3c4cd65f727451a282553724addb9425 https://www.encodeproject.org/files/ENCFF052VUA/@@download/ENCFF052VUA.bigWig hg19 released mild to moderate bottlenecking ENCFF933GER bigWig signal p-value ENCSR336DXE ChIP-seq EFO:0002067 K562 cell line Homo sapiens SKIL-human ENCAB000BNW DNA False 2017-06-29 ENCODE 2, 3 ENCFF010OCL, ENCFF051LWI, ENCFF464SZU, ENCFF581ZJL 2234142261 ENCODE Processing Pipeline 8285d61704ef59676c8b411ea0147b5e https://www.encodeproject.org/files/ENCFF933GER/@@download/ENCFF933GER.bigWig hg19 released mild to moderate bottlenecking ENCFF895JXE bigWig fold change over control ENCSR336DXE ChIP-seq EFO:0002067 K562 cell line Homo sapiens SKIL-human ENCAB000BNW DNA False 2017-06-29 ENCODE 2 ENCFF010OCL, ENCFF051LWI 1388832503 ENCODE Processing Pipeline 1ebd616bd444c1a56e10e7e753e6d36a https://www.encodeproject.org/files/ENCFF895JXE/@@download/ENCFF895JXE.bigWig hg19 released mild to moderate bottlenecking ENCFF770SFT bigWig fold change over control ENCSR336DXE ChIP-seq EFO:0002067 K562 cell line Homo sapiens SKIL-human ENCAB000BNW DNA False 2017-06-29 ENCODE 2, 3 ENCFF010OCL, ENCFF051LWI, ENCFF464SZU, ENCFF581ZJL 2323707230 ENCODE Processing Pipeline 6d51750f5db17d063d6e84ee6f58bb3e https://www.encodeproject.org/files/ENCFF770SFT/@@download/ENCFF770SFT.bigWig hg19 released mild to moderate bottlenecking ENCFF607ZKX bigWig fold change over control ENCSR336DXE ChIP-seq EFO:0002067 K562 cell line Homo sapiens SKIL-human ENCAB000BNW DNA False 2017-06-29 ENCODE 3 ENCFF464SZU, ENCFF581ZJL 1301800566 ENCODE Processing Pipeline 1636066738cb80e6eb4d6c6a6ad18ab7 https://www.encodeproject.org/files/ENCFF607ZKX/@@download/ENCFF607ZKX.bigWig hg19 released mild to moderate bottlenecking ENCFF824GQY bam unfiltered alignments ENCSR336DXE ChIP-seq EFO:0002067 K562 cell line Homo sapiens SKIL-human ENCAB000BNW DNA False 2017-06-29 ENCODE 3 100 ENCFF138KRI, ENCFF411JNO, ENCFF643CGH 5669185083 ENCODE Processing Pipeline 12af20b40b2df5cddb9e92a2be0c81be https://www.encodeproject.org/files/ENCFF824GQY/@@download/ENCFF824GQY.bam GRCh38 released mild to moderate bottlenecking ENCFF606QOR bam unfiltered alignments ENCSR336DXE ChIP-seq EFO:0002067 K562 cell line Homo sapiens SKIL-human ENCAB000BNW DNA False 2017-06-29 ENCODE 2 100 ENCFF310DAJ, ENCFF493LNW, ENCFF643CGH 6893760465 ENCODE Processing Pipeline 2179affd1924e2968b1069d6a9684acc https://www.encodeproject.org/files/ENCFF606QOR/@@download/ENCFF606QOR.bam GRCh38 released mild to moderate bottlenecking ENCFF995IZW bam alignments ENCSR336DXE ChIP-seq EFO:0002067 K562 cell line Homo sapiens SKIL-human ENCAB000BNW DNA False 2017-06-29 ENCODE 3 100 ENCFF138KRI, ENCFF411JNO, ENCFF643CGH 4679392187 ENCODE Processing Pipeline 276486fdf1ccda30966e13fcf530d12e https://www.encodeproject.org/files/ENCFF995IZW/@@download/ENCFF995IZW.bam GRCh38 released mild to moderate bottlenecking ENCFF141XAC bam alignments ENCSR336DXE ChIP-seq EFO:0002067 K562 cell line Homo sapiens SKIL-human ENCAB000BNW DNA False 2017-06-29 ENCODE 2 100 ENCFF310DAJ, ENCFF493LNW, ENCFF643CGH 5637061521 ENCODE Processing Pipeline f3c2bf0a50e6e63c7dfbf9f27f5ec9f5 https://www.encodeproject.org/files/ENCFF141XAC/@@download/ENCFF141XAC.bam GRCh38 released mild to moderate bottlenecking ENCFF901WTJ bigWig signal p-value ENCSR336DXE ChIP-seq EFO:0002067 K562 cell line Homo sapiens SKIL-human ENCAB000BNW DNA False 2017-06-29 ENCODE 2 ENCFF141XAC, ENCFF227IZS 1074028453 ENCODE Processing Pipeline 6e0c72fe357adff05ecf03659ff1823d https://www.encodeproject.org/files/ENCFF901WTJ/@@download/ENCFF901WTJ.bigWig GRCh38 released mild to moderate bottlenecking ENCFF598UAJ bigWig signal p-value ENCSR336DXE ChIP-seq EFO:0002067 K562 cell line Homo sapiens SKIL-human ENCAB000BNW DNA False 2017-06-29 ENCODE 3 ENCFF910IKB, ENCFF995IZW 1239907873 ENCODE Processing Pipeline 755e059d272d7363237c3360da9401e7 https://www.encodeproject.org/files/ENCFF598UAJ/@@download/ENCFF598UAJ.bigWig GRCh38 released mild to moderate bottlenecking ENCFF722OGK bigWig signal p-value ENCSR336DXE ChIP-seq EFO:0002067 K562 cell line Homo sapiens SKIL-human ENCAB000BNW DNA False 2017-06-29 ENCODE 2, 3 ENCFF141XAC, ENCFF227IZS, ENCFF910IKB, ENCFF995IZW 1920663956 ENCODE Processing Pipeline 4c89bd0ab00e2fdf1b4a16ca89b0e14f https://www.encodeproject.org/files/ENCFF722OGK/@@download/ENCFF722OGK.bigWig GRCh38 released mild to moderate bottlenecking ENCFF814EFC bigWig fold change over control ENCSR336DXE ChIP-seq EFO:0002067 K562 cell line Homo sapiens SKIL-human ENCAB000BNW DNA False 2017-06-29 ENCODE 2 ENCFF141XAC, ENCFF227IZS 1389809490 ENCODE Processing Pipeline 707a88d6c466d3d060e488ab3bec7631 https://www.encodeproject.org/files/ENCFF814EFC/@@download/ENCFF814EFC.bigWig GRCh38 released mild to moderate bottlenecking ENCFF577EWC bigWig fold change over control ENCSR336DXE ChIP-seq EFO:0002067 K562 cell line Homo sapiens SKIL-human ENCAB000BNW DNA False 2017-06-29 ENCODE 3 ENCFF910IKB, ENCFF995IZW 1304411371 ENCODE Processing Pipeline 1102a19b539665060b09570fa614f641 https://www.encodeproject.org/files/ENCFF577EWC/@@download/ENCFF577EWC.bigWig GRCh38 released mild to moderate bottlenecking ENCFF759CXX bigWig fold change over control ENCSR336DXE ChIP-seq EFO:0002067 K562 cell line Homo sapiens SKIL-human ENCAB000BNW DNA False 2017-06-29 ENCODE 2, 3 ENCFF141XAC, ENCFF227IZS, ENCFF910IKB, ENCFF995IZW 2315969462 ENCODE Processing Pipeline 571ba67345897983f7dceafd2c12f3ca https://www.encodeproject.org/files/ENCFF759CXX/@@download/ENCFF759CXX.bigWig GRCh38 released mild to moderate bottlenecking ENCFF903APS bed narrowPeak peaks ENCSR336DXE ChIP-seq EFO:0002067 K562 cell line Homo sapiens SKIL-human ENCAB000BNW DNA False 2017-06-29 ENCODE 2 ENCFF141XAC, ENCFF227IZS 7084067 ENCODE Processing Pipeline d242b8e6b752dfb2913cbdc126582d88 https://www.encodeproject.org/files/ENCFF903APS/@@download/ENCFF903APS.bed.gz GRCh38 released mild to moderate bottlenecking ENCFF056QMP bed narrowPeak peaks ENCSR336DXE ChIP-seq EFO:0002067 K562 cell line Homo sapiens SKIL-human ENCAB000BNW DNA False 2017-06-29 ENCODE 2, 3 ENCFF141XAC, ENCFF227IZS, ENCFF910IKB, ENCFF995IZW 7278803 ENCODE Processing Pipeline c3384dc77287d72ba20afc6e7eef0c9f https://www.encodeproject.org/files/ENCFF056QMP/@@download/ENCFF056QMP.bed.gz GRCh38 released mild to moderate bottlenecking ENCFF415LHA bigBed narrowPeak peaks ENCSR336DXE ChIP-seq EFO:0002067 K562 cell line Homo sapiens SKIL-human ENCAB000BNW DNA False 2017-06-29 ENCODE 2 ENCFF903APS 13063888 ENCODE Processing Pipeline 7933f9b485d5da73e90e0bcf695ea87f https://www.encodeproject.org/files/ENCFF415LHA/@@download/ENCFF415LHA.bigBed GRCh38 released mild to moderate bottlenecking ENCFF795YNH bigBed narrowPeak peaks ENCSR336DXE ChIP-seq EFO:0002067 K562 cell line Homo sapiens SKIL-human ENCAB000BNW DNA False 2017-06-29 ENCODE 2, 3 ENCFF056QMP 13038590 ENCODE Processing Pipeline 9776cee18becd657d1e4fd8f93303c6a https://www.encodeproject.org/files/ENCFF795YNH/@@download/ENCFF795YNH.bigBed GRCh38 released mild to moderate bottlenecking ENCFF100VPO bed narrowPeak conservative idr thresholded peaks ENCSR336DXE ChIP-seq EFO:0002067 K562 cell line Homo sapiens SKIL-human ENCAB000BNW DNA False 2017-06-29 ENCODE 2, 3 ENCFF056QMP, ENCFF419RSJ, ENCFF747YGC, ENCFF903APS 324607 ENCODE Processing Pipeline 2f43c69ee85a6f1be5dbd33fdeac015a https://www.encodeproject.org/files/ENCFF100VPO/@@download/ENCFF100VPO.bed.gz GRCh38 released mild to moderate bottlenecking ENCFF747YGC bed narrowPeak peaks ENCSR336DXE ChIP-seq EFO:0002067 K562 cell line Homo sapiens SKIL-human ENCAB000BNW DNA False 2017-06-29 ENCODE 3 ENCFF910IKB, ENCFF995IZW 6550309 ENCODE Processing Pipeline 0726aed103c8434a8e9515dfd5cb57b7 https://www.encodeproject.org/files/ENCFF747YGC/@@download/ENCFF747YGC.bed.gz GRCh38 released mild to moderate bottlenecking ENCFF814EDS bigBed narrowPeak peaks ENCSR336DXE ChIP-seq EFO:0002067 K562 cell line Homo sapiens SKIL-human ENCAB000BNW DNA False 2017-06-29 ENCODE 3 ENCFF747YGC 13406640 ENCODE Processing Pipeline 0016113fd112022dfe572f438ebd852c https://www.encodeproject.org/files/ENCFF814EDS/@@download/ENCFF814EDS.bigBed GRCh38 released mild to moderate bottlenecking ENCFF913UBP bigBed narrowPeak conservative idr thresholded peaks ENCSR336DXE ChIP-seq EFO:0002067 K562 cell line Homo sapiens SKIL-human ENCAB000BNW DNA False 2017-06-29 ENCODE 2, 3 ENCFF100VPO 650088 ENCODE Processing Pipeline b203efd90986165d95448e2e724ee949 https://www.encodeproject.org/files/ENCFF913UBP/@@download/ENCFF913UBP.bigBed GRCh38 released mild to moderate bottlenecking ENCFF254QDM bed narrowPeak optimal idr thresholded peaks ENCSR336DXE ChIP-seq EFO:0002067 K562 cell line Homo sapiens SKIL-human ENCAB000BNW DNA False 2017-06-29 ENCODE 2, 3 ENCFF056QMP, ENCFF419RSJ, ENCFF747YGC, ENCFF903APS 439315 ENCODE Processing Pipeline 47ce323da31ee8c3a14657ee0a2df60b https://www.encodeproject.org/files/ENCFF254QDM/@@download/ENCFF254QDM.bed.gz GRCh38 released mild to moderate bottlenecking ENCFF191NPR bigBed narrowPeak optimal idr thresholded peaks ENCSR336DXE ChIP-seq EFO:0002067 K562 cell line Homo sapiens SKIL-human ENCAB000BNW DNA False 2017-06-29 ENCODE 2, 3 ENCFF254QDM 835689 ENCODE Processing Pipeline 24d81f45d0a70ca91aaf2beab85a8e85 https://www.encodeproject.org/files/ENCFF191NPR/@@download/ENCFF191NPR.bigBed GRCh38 released mild to moderate bottlenecking ENCFF476KBA bed narrowPeak peaks ENCSR336DXE ChIP-seq EFO:0002067 K562 cell line Homo sapiens SKIL-human ENCAB000BNW DNA False 2017-06-29 ENCODE 3 ENCFF464SZU, ENCFF581ZJL 6555255 ENCODE Processing Pipeline 701e52355b8054f5691ffa5db71126dc https://www.encodeproject.org/files/ENCFF476KBA/@@download/ENCFF476KBA.bed.gz hg19 released mild to moderate bottlenecking ENCFF487LPL bigBed narrowPeak peaks ENCSR336DXE ChIP-seq EFO:0002067 K562 cell line Homo sapiens SKIL-human ENCAB000BNW DNA False 2017-06-29 ENCODE 3 ENCFF476KBA 13397202 ENCODE Processing Pipeline 6e4b380121badaa27cade62a892c760a https://www.encodeproject.org/files/ENCFF487LPL/@@download/ENCFF487LPL.bigBed hg19 released mild to moderate bottlenecking ENCFF411KLS bigBed narrowPeak peaks ENCSR336DXE ChIP-seq EFO:0002067 K562 cell line Homo sapiens SKIL-human ENCAB000BNW DNA False 2017-06-29 ENCODE 2, 3 ENCFF264IPL 13044348 ENCODE Processing Pipeline bc580b0a6f4dc3bc89ef98dac9f7e1d4 https://www.encodeproject.org/files/ENCFF411KLS/@@download/ENCFF411KLS.bigBed hg19 released mild to moderate bottlenecking ENCFF501IBL bed narrowPeak peaks ENCSR336DXE ChIP-seq EFO:0002067 K562 cell line Homo sapiens SKIL-human ENCAB000BNW DNA False 2017-06-29 ENCODE 2 ENCFF010OCL, ENCFF051LWI 7042297 ENCODE Processing Pipeline 36a535e24307ab7e0d632800d161ebbd https://www.encodeproject.org/files/ENCFF501IBL/@@download/ENCFF501IBL.bed.gz hg19 released mild to moderate bottlenecking ENCFF264IPL bed narrowPeak peaks ENCSR336DXE ChIP-seq EFO:0002067 K562 cell line Homo sapiens SKIL-human ENCAB000BNW DNA False 2017-06-29 ENCODE 2, 3 ENCFF010OCL, ENCFF051LWI, ENCFF464SZU, ENCFF581ZJL 7296916 ENCODE Processing Pipeline 8f5a77b268dd5216f4a26bf3b158fa22 https://www.encodeproject.org/files/ENCFF264IPL/@@download/ENCFF264IPL.bed.gz hg19 released mild to moderate bottlenecking ENCFF578RYW bigBed narrowPeak peaks ENCSR336DXE ChIP-seq EFO:0002067 K562 cell line Homo sapiens SKIL-human ENCAB000BNW DNA False 2017-06-29 ENCODE 2 ENCFF501IBL 13006335 ENCODE Processing Pipeline 37aa998d9a571e9329063c88cd62e38c https://www.encodeproject.org/files/ENCFF578RYW/@@download/ENCFF578RYW.bigBed hg19 released mild to moderate bottlenecking ENCFF481WGW bed narrowPeak optimal idr thresholded peaks ENCSR336DXE ChIP-seq EFO:0002067 K562 cell line Homo sapiens SKIL-human ENCAB000BNW DNA False 2017-06-29 ENCODE 2, 3 ENCFF001TDO, ENCFF264IPL, ENCFF476KBA, ENCFF501IBL 449348 ENCODE Processing Pipeline 9d5b80adbb13a11fc2daf31c2c04992c https://www.encodeproject.org/files/ENCFF481WGW/@@download/ENCFF481WGW.bed.gz hg19 released mild to moderate bottlenecking ENCFF614BOW bigBed narrowPeak optimal idr thresholded peaks ENCSR336DXE ChIP-seq EFO:0002067 K562 cell line Homo sapiens SKIL-human ENCAB000BNW DNA False 2017-06-29 ENCODE 2, 3 ENCFF481WGW 1015692 ENCODE Processing Pipeline 796f398a7848ba3b765d5b419cca77ff https://www.encodeproject.org/files/ENCFF614BOW/@@download/ENCFF614BOW.bigBed hg19 released mild to moderate bottlenecking ENCFF048GFY bed narrowPeak conservative idr thresholded peaks ENCSR336DXE ChIP-seq EFO:0002067 K562 cell line Homo sapiens SKIL-human ENCAB000BNW DNA False 2017-06-29 ENCODE 2, 3 ENCFF001TDO, ENCFF264IPL, ENCFF476KBA, ENCFF501IBL 329669 ENCODE Processing Pipeline b83290779e85ccd760121acbb5c22fbb https://www.encodeproject.org/files/ENCFF048GFY/@@download/ENCFF048GFY.bed.gz hg19 released mild to moderate bottlenecking ENCFF760FQS bigBed narrowPeak conservative idr thresholded peaks ENCSR336DXE ChIP-seq EFO:0002067 K562 cell line Homo sapiens SKIL-human ENCAB000BNW DNA False 2017-06-29 ENCODE 2, 3 ENCFF048GFY 780599 ENCODE Processing Pipeline 111a18ff7005828549e89c77725b9f54 https://www.encodeproject.org/files/ENCFF760FQS/@@download/ENCFF760FQS.bigBed hg19 released mild to moderate bottlenecking ENCFF956NJR fastq reads ENCSR670FDA ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFATC3-human ENCAB872ODR DNA False 2017-09-29 ENCODE 1 1 100 paired-ended 2 ENCFF122AVV 2245111387 Michael Snyder, Stanford 36de5b39906846f88e1a451ae285c81e SRA:SRR6213610 https://www.encodeproject.org/files/ENCFF956NJR/@@download/ENCFF956NJR.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFH/ released mild to moderate bottlenecking ENCFF122AVV fastq reads ENCSR670FDA ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFATC3-human ENCAB872ODR DNA False 2017-09-29 ENCODE 1 1 100 paired-ended 1 ENCFF956NJR 2222379812 Michael Snyder, Stanford 7ac0d43ad423a79a62614e9c1c39c18f SRA:SRR6213610 https://www.encodeproject.org/files/ENCFF122AVV/@@download/ENCFF122AVV.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFF/ released mild to moderate bottlenecking ENCFF483YZA fastq reads ENCSR670FDA ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFATC3-human ENCAB872ODR DNA False 2017-09-29 ENCODE 2 1 100 paired-ended 1 ENCFF570GLE 2476336422 Michael Snyder, Stanford 05523fdf4e14225fb663229b9b945e3d SRA:SRR6213611 https://www.encodeproject.org/files/ENCFF483YZA/@@download/ENCFF483YZA.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFD/ released mild to moderate bottlenecking ENCFF570GLE fastq reads ENCSR670FDA ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFATC3-human ENCAB872ODR DNA False 2017-09-29 ENCODE 2 1 100 paired-ended 2 ENCFF483YZA 2562027389 Michael Snyder, Stanford 66d780f9f82b5191239a0e4831eb966b SRA:SRR6213611 https://www.encodeproject.org/files/ENCFF570GLE/@@download/ENCFF570GLE.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFA/ released mild to moderate bottlenecking ENCFF990FAK bam unfiltered alignments ENCSR670FDA ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFATC3-human ENCAB872ODR DNA False 2017-09-29 ENCODE 1 100 ENCFF122AVV, ENCFF807MUK, ENCFF956NJR 4914679198 ENCODE Processing Pipeline 238f4060f882cab9865ec1a8a5f5db1a https://www.encodeproject.org/files/ENCFF990FAK/@@download/ENCFF990FAK.bam hg19 released mild to moderate bottlenecking ENCFF799SNH bam unfiltered alignments ENCSR670FDA ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFATC3-human ENCAB872ODR DNA False 2017-09-29 ENCODE 2 100 ENCFF483YZA, ENCFF570GLE, ENCFF643CGH 5479273477 ENCODE Processing Pipeline 16b44ba92ee47dcd15cdb5ed535d7a31 https://www.encodeproject.org/files/ENCFF799SNH/@@download/ENCFF799SNH.bam GRCh38 released mild to moderate bottlenecking ENCFF892INQ bam unfiltered alignments ENCSR670FDA ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFATC3-human ENCAB872ODR DNA False 2017-09-29 ENCODE 1 100 ENCFF122AVV, ENCFF643CGH, ENCFF956NJR 4919614182 ENCODE Processing Pipeline 898487709e8ddbde48b2d87204f22373 https://www.encodeproject.org/files/ENCFF892INQ/@@download/ENCFF892INQ.bam GRCh38 released mild to moderate bottlenecking ENCFF165XNV bam unfiltered alignments ENCSR670FDA ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFATC3-human ENCAB872ODR DNA False 2017-09-29 ENCODE 2 100 ENCFF483YZA, ENCFF570GLE, ENCFF807MUK 5472691142 ENCODE Processing Pipeline 89d24a417982798997a842ee3962646b https://www.encodeproject.org/files/ENCFF165XNV/@@download/ENCFF165XNV.bam hg19 released mild to moderate bottlenecking ENCFF412AMR bam alignments ENCSR670FDA ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFATC3-human ENCAB872ODR DNA False 2017-09-29 ENCODE 2 100 ENCFF483YZA, ENCFF570GLE, ENCFF643CGH 4316226121 ENCODE Processing Pipeline fb882255eab425e333b572f5229a89e6 https://www.encodeproject.org/files/ENCFF412AMR/@@download/ENCFF412AMR.bam GRCh38 released mild to moderate bottlenecking ENCFF410WSQ bam alignments ENCSR670FDA ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFATC3-human ENCAB872ODR DNA False 2017-09-29 ENCODE 1 100 ENCFF122AVV, ENCFF807MUK, ENCFF956NJR 3961577359 ENCODE Processing Pipeline 06d65bebffdc9ad10384322a01b7446b https://www.encodeproject.org/files/ENCFF410WSQ/@@download/ENCFF410WSQ.bam hg19 released mild to moderate bottlenecking ENCFF871PMM bam alignments ENCSR670FDA ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFATC3-human ENCAB872ODR DNA False 2017-09-29 ENCODE 2 100 ENCFF483YZA, ENCFF570GLE, ENCFF807MUK 4314774383 ENCODE Processing Pipeline 50ebc7770f813f20767c95720b6b6614 https://www.encodeproject.org/files/ENCFF871PMM/@@download/ENCFF871PMM.bam hg19 released mild to moderate bottlenecking ENCFF279QAV bam alignments ENCSR670FDA ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFATC3-human ENCAB872ODR DNA False 2017-09-29 ENCODE 1 100 ENCFF122AVV, ENCFF643CGH, ENCFF956NJR 3963029991 ENCODE Processing Pipeline 05daaa4a0a206ecb723912785bd721e2 https://www.encodeproject.org/files/ENCFF279QAV/@@download/ENCFF279QAV.bam GRCh38 released mild to moderate bottlenecking ENCFF254BMS bigWig fold change over control ENCSR670FDA ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFATC3-human ENCAB872ODR DNA False 2017-09-29 ENCODE 1, 2 ENCFF051LWI, ENCFF410WSQ, ENCFF581ZJL, ENCFF871PMM 2113328947 ENCODE Processing Pipeline 2d88fbf61ace69361338bc99d9845e80 https://www.encodeproject.org/files/ENCFF254BMS/@@download/ENCFF254BMS.bigWig hg19 released mild to moderate bottlenecking ENCFF324WHA bed narrowPeak peaks ENCSR670FDA ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFATC3-human ENCAB872ODR DNA False 2017-09-29 ENCODE 2 ENCFF051LWI, ENCFF871PMM 6577461 ENCODE Processing Pipeline 383eeeeeb7dac3f197aa9d7d9a110d35 https://www.encodeproject.org/files/ENCFF324WHA/@@download/ENCFF324WHA.bed.gz hg19 released mild to moderate bottlenecking ENCFF054BEL bigWig signal p-value ENCSR670FDA ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFATC3-human ENCAB872ODR DNA False 2017-09-29 ENCODE 1, 2 ENCFF051LWI, ENCFF410WSQ, ENCFF581ZJL, ENCFF871PMM 1776022185 ENCODE Processing Pipeline 89d7bba504b88f8cfd925710a633b2f4 https://www.encodeproject.org/files/ENCFF054BEL/@@download/ENCFF054BEL.bigWig hg19 released mild to moderate bottlenecking ENCFF075TGT bigWig fold change over control ENCSR670FDA ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFATC3-human ENCAB872ODR DNA False 2017-09-29 ENCODE 1 ENCFF410WSQ, ENCFF581ZJL 1117052290 ENCODE Processing Pipeline 339c8726c32df8a8c0ee48d994576248 https://www.encodeproject.org/files/ENCFF075TGT/@@download/ENCFF075TGT.bigWig hg19 released mild to moderate bottlenecking ENCFF179EVN bigWig fold change over control ENCSR670FDA ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFATC3-human ENCAB872ODR DNA False 2017-09-29 ENCODE 2 ENCFF051LWI, ENCFF871PMM 1204800370 ENCODE Processing Pipeline 2d9faf1105954d2a236c3ec41f48baab https://www.encodeproject.org/files/ENCFF179EVN/@@download/ENCFF179EVN.bigWig hg19 released mild to moderate bottlenecking ENCFF184RRU bed narrowPeak optimal idr thresholded peaks ENCSR670FDA ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFATC3-human ENCAB872ODR DNA False 2017-09-29 ENCODE 1, 2 ENCFF001TDO, ENCFF324WHA, ENCFF620EBO, ENCFF951XWI 133041 ENCODE Processing Pipeline 3ae96e984e743858b619938ccc58a435 https://www.encodeproject.org/files/ENCFF184RRU/@@download/ENCFF184RRU.bed.gz hg19 released mild to moderate bottlenecking ENCFF357FYW bigWig signal p-value ENCSR670FDA ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFATC3-human ENCAB872ODR DNA False 2017-09-29 ENCODE 1 ENCFF410WSQ, ENCFF581ZJL 1083153619 ENCODE Processing Pipeline 39c7a9231ade19e1df31c72067070137 https://www.encodeproject.org/files/ENCFF357FYW/@@download/ENCFF357FYW.bigWig hg19 released mild to moderate bottlenecking ENCFF113GSW bigWig signal p-value ENCSR670FDA ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFATC3-human ENCAB872ODR DNA False 2017-09-29 ENCODE 2 ENCFF051LWI, ENCFF871PMM 989066393 ENCODE Processing Pipeline 912a54b05bb765510b5ebef03a047901 https://www.encodeproject.org/files/ENCFF113GSW/@@download/ENCFF113GSW.bigWig hg19 released mild to moderate bottlenecking ENCFF620EBO bed narrowPeak peaks ENCSR670FDA ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFATC3-human ENCAB872ODR DNA False 2017-09-29 ENCODE 1, 2 ENCFF051LWI, ENCFF410WSQ, ENCFF581ZJL, ENCFF871PMM 7219988 ENCODE Processing Pipeline fa21fbdb3f3b508c7eb867947084a66c https://www.encodeproject.org/files/ENCFF620EBO/@@download/ENCFF620EBO.bed.gz hg19 released mild to moderate bottlenecking ENCFF185YRG bed narrowPeak conservative idr thresholded peaks ENCSR670FDA ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFATC3-human ENCAB872ODR DNA False 2017-09-29 ENCODE 1, 2 ENCFF001TDO, ENCFF324WHA, ENCFF620EBO, ENCFF951XWI 82064 ENCODE Processing Pipeline cf50416e276049e1c601d1223794a056 https://www.encodeproject.org/files/ENCFF185YRG/@@download/ENCFF185YRG.bed.gz hg19 released mild to moderate bottlenecking ENCFF203EPM bigBed narrowPeak peaks ENCSR670FDA ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFATC3-human ENCAB872ODR DNA False 2017-09-29 ENCODE 1 ENCFF951XWI 13076832 ENCODE Processing Pipeline 3ff06ba70717b96eb846945c95f1c467 https://www.encodeproject.org/files/ENCFF203EPM/@@download/ENCFF203EPM.bigBed hg19 released mild to moderate bottlenecking ENCFF544YEY bigBed narrowPeak peaks ENCSR670FDA ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFATC3-human ENCAB872ODR DNA False 2017-09-29 ENCODE 2 ENCFF324WHA 13214723 ENCODE Processing Pipeline df200c4ee0da03b51af3a54ce2899893 https://www.encodeproject.org/files/ENCFF544YEY/@@download/ENCFF544YEY.bigBed hg19 released mild to moderate bottlenecking ENCFF661TCO bigBed narrowPeak peaks ENCSR670FDA ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFATC3-human ENCAB872ODR DNA False 2017-09-29 ENCODE 1, 2 ENCFF620EBO 12940735 ENCODE Processing Pipeline ecbc6808dd0055fc54a092972868a8e0 https://www.encodeproject.org/files/ENCFF661TCO/@@download/ENCFF661TCO.bigBed hg19 released mild to moderate bottlenecking ENCFF951XWI bed narrowPeak peaks ENCSR670FDA ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFATC3-human ENCAB872ODR DNA False 2017-09-29 ENCODE 1 ENCFF410WSQ, ENCFF581ZJL 6612725 ENCODE Processing Pipeline 3524fdf624f98312e8d8eddba86a108e https://www.encodeproject.org/files/ENCFF951XWI/@@download/ENCFF951XWI.bed.gz hg19 released mild to moderate bottlenecking ENCFF798VMO bigBed narrowPeak optimal idr thresholded peaks ENCSR670FDA ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFATC3-human ENCAB872ODR DNA False 2017-09-29 ENCODE 1, 2 ENCFF184RRU 285130 ENCODE Processing Pipeline 8e33a48cf91ee65af0cc23f6139c1a09 https://www.encodeproject.org/files/ENCFF798VMO/@@download/ENCFF798VMO.bigBed hg19 released mild to moderate bottlenecking ENCFF226OHG bigBed narrowPeak conservative idr thresholded peaks ENCSR670FDA ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFATC3-human ENCAB872ODR DNA False 2017-09-29 ENCODE 1, 2 ENCFF185YRG 209785 ENCODE Processing Pipeline 2777687ffe65db2287e6c8f6129fcaa1 https://www.encodeproject.org/files/ENCFF226OHG/@@download/ENCFF226OHG.bigBed hg19 released mild to moderate bottlenecking ENCFF427RXT bigWig fold change over control ENCSR670FDA ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFATC3-human ENCAB872ODR DNA False 2017-09-29 ENCODE 1 ENCFF279QAV, ENCFF910IKB 1125817972 ENCODE Processing Pipeline dd85cf4fbe6525f7ce4262faf5d7a419 https://www.encodeproject.org/files/ENCFF427RXT/@@download/ENCFF427RXT.bigWig GRCh38 released mild to moderate bottlenecking ENCFF545VJW bigWig signal p-value ENCSR670FDA ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFATC3-human ENCAB872ODR DNA False 2017-09-29 ENCODE 1, 2 ENCFF227IZS, ENCFF279QAV, ENCFF412AMR, ENCFF910IKB 1918788883 ENCODE Processing Pipeline 204aaa663bc0b41fdbe5607c4910fc28 https://www.encodeproject.org/files/ENCFF545VJW/@@download/ENCFF545VJW.bigWig GRCh38 released mild to moderate bottlenecking ENCFF082EPO bed narrowPeak optimal idr thresholded peaks ENCSR670FDA ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFATC3-human ENCAB872ODR DNA False 2017-09-29 ENCODE 1, 2 ENCFF157UVM, ENCFF288OGE, ENCFF419RSJ, ENCFF952WBA 128047 ENCODE Processing Pipeline fe01466152fd2e904e47cfeeb6d3c4ab https://www.encodeproject.org/files/ENCFF082EPO/@@download/ENCFF082EPO.bed.gz GRCh38 released mild to moderate bottlenecking ENCFF289VBN bigBed narrowPeak optimal idr thresholded peaks ENCSR670FDA ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFATC3-human ENCAB872ODR DNA False 2017-09-29 ENCODE 1, 2 ENCFF082EPO 278960 ENCODE Processing Pipeline da8bc5b8f20430cbe2bde9aae672ada9 https://www.encodeproject.org/files/ENCFF289VBN/@@download/ENCFF289VBN.bigBed GRCh38 released mild to moderate bottlenecking ENCFF559AMP bigWig signal p-value ENCSR670FDA ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFATC3-human ENCAB872ODR DNA False 2017-09-29 ENCODE 1 ENCFF279QAV, ENCFF910IKB 986628146 ENCODE Processing Pipeline 0d56fa3f401e30b13148103e0c9667ac https://www.encodeproject.org/files/ENCFF559AMP/@@download/ENCFF559AMP.bigWig GRCh38 released mild to moderate bottlenecking ENCFF872QJA bigWig fold change over control ENCSR670FDA ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFATC3-human ENCAB872ODR DNA False 2017-09-29 ENCODE 2 ENCFF227IZS, ENCFF412AMR 1204809444 ENCODE Processing Pipeline c945836245cf8c27c085ce4cc1324e96 https://www.encodeproject.org/files/ENCFF872QJA/@@download/ENCFF872QJA.bigWig GRCh38 released mild to moderate bottlenecking ENCFF843LQG bed narrowPeak conservative idr thresholded peaks ENCSR670FDA ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFATC3-human ENCAB872ODR DNA False 2017-09-29 ENCODE 1, 2 ENCFF157UVM, ENCFF288OGE, ENCFF419RSJ, ENCFF952WBA 81125 ENCODE Processing Pipeline 897d1ff07599932f6b2b0f17a43e5ec4 https://www.encodeproject.org/files/ENCFF843LQG/@@download/ENCFF843LQG.bed.gz GRCh38 released mild to moderate bottlenecking ENCFF273ZXW bigWig fold change over control ENCSR670FDA ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFATC3-human ENCAB872ODR DNA False 2017-09-29 ENCODE 1, 2 ENCFF227IZS, ENCFF279QAV, ENCFF412AMR, ENCFF910IKB 2114794970 ENCODE Processing Pipeline 096dfa3e9213f86877a4a01fbe6b5948 https://www.encodeproject.org/files/ENCFF273ZXW/@@download/ENCFF273ZXW.bigWig GRCh38 released mild to moderate bottlenecking ENCFF952WBA bed narrowPeak peaks ENCSR670FDA ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFATC3-human ENCAB872ODR DNA False 2017-09-29 ENCODE 1 ENCFF279QAV, ENCFF910IKB 6612457 ENCODE Processing Pipeline bee6b13c31927f6d1442f23ea7465554 https://www.encodeproject.org/files/ENCFF952WBA/@@download/ENCFF952WBA.bed.gz GRCh38 released mild to moderate bottlenecking ENCFF288OGE bed narrowPeak peaks ENCSR670FDA ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFATC3-human ENCAB872ODR DNA False 2017-09-29 ENCODE 1, 2 ENCFF227IZS, ENCFF279QAV, ENCFF412AMR, ENCFF910IKB 7220077 ENCODE Processing Pipeline 1780a2bf28dc46433b92fb99b0f54d26 https://www.encodeproject.org/files/ENCFF288OGE/@@download/ENCFF288OGE.bed.gz GRCh38 released mild to moderate bottlenecking ENCFF488PZU bigBed narrowPeak peaks ENCSR670FDA ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFATC3-human ENCAB872ODR DNA False 2017-09-29 ENCODE 1 ENCFF952WBA 13084386 ENCODE Processing Pipeline 7de6a360093088ddc0a7e82ac1862616 https://www.encodeproject.org/files/ENCFF488PZU/@@download/ENCFF488PZU.bigBed GRCh38 released mild to moderate bottlenecking ENCFF734KIX bigBed narrowPeak peaks ENCSR670FDA ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFATC3-human ENCAB872ODR DNA False 2017-09-29 ENCODE 1, 2 ENCFF288OGE 12942911 ENCODE Processing Pipeline ae71de384ae190897947682ba3e00dfb https://www.encodeproject.org/files/ENCFF734KIX/@@download/ENCFF734KIX.bigBed GRCh38 released mild to moderate bottlenecking ENCFF451ONH bigWig signal p-value ENCSR670FDA ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFATC3-human ENCAB872ODR DNA False 2017-09-29 ENCODE 2 ENCFF227IZS, ENCFF412AMR 1162758883 ENCODE Processing Pipeline 400e59283ee38772b07a6fb90e7c9d07 https://www.encodeproject.org/files/ENCFF451ONH/@@download/ENCFF451ONH.bigWig GRCh38 released mild to moderate bottlenecking ENCFF157UVM bed narrowPeak peaks ENCSR670FDA ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFATC3-human ENCAB872ODR DNA False 2017-09-29 ENCODE 2 ENCFF227IZS, ENCFF412AMR 6579825 ENCODE Processing Pipeline 1062701c365a350285d98dadf536413b https://www.encodeproject.org/files/ENCFF157UVM/@@download/ENCFF157UVM.bed.gz GRCh38 released mild to moderate bottlenecking ENCFF176EGG bigBed narrowPeak peaks ENCSR670FDA ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFATC3-human ENCAB872ODR DNA False 2017-09-29 ENCODE 2 ENCFF157UVM 13223748 ENCODE Processing Pipeline fd98895625b2fed704c82bc369c383e1 https://www.encodeproject.org/files/ENCFF176EGG/@@download/ENCFF176EGG.bigBed GRCh38 released mild to moderate bottlenecking ENCFF658THP bigBed narrowPeak conservative idr thresholded peaks ENCSR670FDA ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFATC3-human ENCAB872ODR DNA False 2017-09-29 ENCODE 1, 2 ENCFF843LQG 209167 ENCODE Processing Pipeline 8f87ad156a421c9d31b7b91719094dde https://www.encodeproject.org/files/ENCFF658THP/@@download/ENCFF658THP.bigBed GRCh38 released mild to moderate bottlenecking ENCFF001RUJ fastq reads ENCSR000FCC ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFE2-human ENCAB000AUE DNA see document see document False 2014-07-07 ENCODE 2 1 50 single-ended 1345596780 Richard Myers, HAIB e694beea040d38d80927ddcade0b2921 SRA:SRR5331592 https://www.encodeproject.org/files/ENCFF001RUJ/@@download/ENCFF001RUJ.fastq.gz Illumina HiSeq 2000 /files/ENCFF001RVO/ released low read depth, antibody characterized with exemption ENCFF001RUN fastq reads ENCSR000FCC ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFE2-human ENCAB000AUE DNA see document see document False 2014-07-07 ENCODE 1 1 50 single-ended 1805177072 Richard Myers, HAIB 6697eb0cf1ef6f7cb088e730b72bff7d SRA:SRR5331593 https://www.encodeproject.org/files/ENCFF001RUN/@@download/ENCFF001RUN.fastq.gz Illumina HiSeq 2000 /files/ENCFF001RVP/ released low read depth, antibody characterized with exemption ENCFF395SCA bam alignments ENCSR000FCC ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFE2-human ENCAB000AUE DNA see document see document False 2014-07-07 ENCODE 1 ENCFF001RUN, ENCFF807MUK 1443391646 ENCODE Processing Pipeline 5f6584251153262f49201dc8121e3b05 https://www.encodeproject.org/files/ENCFF395SCA/@@download/ENCFF395SCA.bam hg19 released low read depth, antibody characterized with exemption ENCFF545MBO bam alignments ENCSR000FCC ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFE2-human ENCAB000AUE DNA see document see document False 2014-07-07 ENCODE 2 ENCFF001RUJ, ENCFF807MUK 1066478481 ENCODE Processing Pipeline 686787c7d09a8992f3636a6cde1915b7 https://www.encodeproject.org/files/ENCFF545MBO/@@download/ENCFF545MBO.bam hg19 released low read depth, antibody characterized with exemption ENCFF633MKO bigWig signal p-value ENCSR000FCC ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFE2-human ENCAB000AUE DNA see document see document False 2014-07-07 ENCODE 2 ENCFF061QOJ, ENCFF727QOD 708234187 ENCODE Processing Pipeline 9295d1a2afbf679f8bd82315a06cbfc1 https://www.encodeproject.org/files/ENCFF633MKO/@@download/ENCFF633MKO.bigWig hg19 released low read depth, antibody characterized with exemption ENCFF243WKQ bigWig signal p-value ENCSR000FCC ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFE2-human ENCAB000AUE DNA see document see document False 2014-07-07 ENCODE 1 ENCFF103CZU, ENCFF578ISP 792970952 ENCODE Processing Pipeline 0719bd09b378b24180ed8dc0b23634ac https://www.encodeproject.org/files/ENCFF243WKQ/@@download/ENCFF243WKQ.bigWig hg19 released low read depth, antibody characterized with exemption ENCFF399JNI bigWig signal p-value ENCSR000FCC ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFE2-human ENCAB000AUE DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF061QOJ, ENCFF103CZU, ENCFF578ISP, ENCFF727QOD 1317915506 ENCODE Processing Pipeline adcc20d6513c79088fd8f99711e4d396 https://www.encodeproject.org/files/ENCFF399JNI/@@download/ENCFF399JNI.bigWig hg19 released low read depth, antibody characterized with exemption ENCFF139HBD bigWig fold change over control ENCSR000FCC ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFE2-human ENCAB000AUE DNA see document see document False 2014-07-07 ENCODE 1 ENCFF103CZU, ENCFF578ISP 685829961 ENCODE Processing Pipeline 61d486b18c429bee7a68c9afcb2d53ad https://www.encodeproject.org/files/ENCFF139HBD/@@download/ENCFF139HBD.bigWig hg19 released low read depth, antibody characterized with exemption ENCFF463HBH bigWig fold change over control ENCSR000FCC ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFE2-human ENCAB000AUE DNA see document see document False 2014-07-07 ENCODE 2 ENCFF061QOJ, ENCFF727QOD 528043841 ENCODE Processing Pipeline 487169747281e9238754f3380d38b7f6 https://www.encodeproject.org/files/ENCFF463HBH/@@download/ENCFF463HBH.bigWig hg19 released low read depth, antibody characterized with exemption ENCFF557POT bigWig fold change over control ENCSR000FCC ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFE2-human ENCAB000AUE DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF061QOJ, ENCFF103CZU, ENCFF578ISP, ENCFF727QOD 1341401762 ENCODE Processing Pipeline 55bb7b18e471d1e4efa7e5c5fec1c196 https://www.encodeproject.org/files/ENCFF557POT/@@download/ENCFF557POT.bigWig hg19 released low read depth, antibody characterized with exemption ENCFF545NPE bam unfiltered alignments ENCSR000FCC ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFE2-human ENCAB000AUE DNA see document see document False 2014-07-07 ENCODE 1 50 ENCFF001RUN, ENCFF643CGH 1917593587 ENCODE Processing Pipeline b2a400317e53b99d69d2e38e726d1cfe https://www.encodeproject.org/files/ENCFF545NPE/@@download/ENCFF545NPE.bam GRCh38 released low read depth, antibody characterized with exemption ENCFF570ZZQ bam unfiltered alignments ENCSR000FCC ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFE2-human ENCAB000AUE DNA see document see document False 2014-07-07 ENCODE 2 50 ENCFF001RUJ, ENCFF643CGH 1425472229 ENCODE Processing Pipeline 2377c56c8e4bff0af870f15daf953a34 https://www.encodeproject.org/files/ENCFF570ZZQ/@@download/ENCFF570ZZQ.bam GRCh38 released low read depth, antibody characterized with exemption ENCFF198RTF bam alignments ENCSR000FCC ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFE2-human ENCAB000AUE DNA see document see document False 2014-07-07 ENCODE 2 50 ENCFF001RUJ, ENCFF643CGH 1065977334 ENCODE Processing Pipeline 5e98e891be510094f52f76644ba9dd2d https://www.encodeproject.org/files/ENCFF198RTF/@@download/ENCFF198RTF.bam GRCh38 released low read depth, antibody characterized with exemption ENCFF187ZET bam alignments ENCSR000FCC ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFE2-human ENCAB000AUE DNA see document see document False 2014-07-07 ENCODE 1 50 ENCFF001RUN, ENCFF643CGH 1442824719 ENCODE Processing Pipeline d56c9d197ccfb5bcb1bd72ded2c2a63b https://www.encodeproject.org/files/ENCFF187ZET/@@download/ENCFF187ZET.bam GRCh38 released low read depth, antibody characterized with exemption ENCFF503MKK bigWig signal p-value ENCSR000FCC ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFE2-human ENCAB000AUE DNA see document see document False 2014-07-07 ENCODE 1 ENCFF121DUE, ENCFF187ZET 749423840 ENCODE Processing Pipeline 50781091932cb3aa5c8f29c8017e32d1 https://www.encodeproject.org/files/ENCFF503MKK/@@download/ENCFF503MKK.bigWig GRCh38 released low read depth, antibody characterized with exemption ENCFF334NQI bigWig signal p-value ENCSR000FCC ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFE2-human ENCAB000AUE DNA see document see document False 2014-07-07 ENCODE 2 ENCFF198RTF, ENCFF332SVJ 723957946 ENCODE Processing Pipeline 1e845449120d282e93d3ef1cf64fdd0b https://www.encodeproject.org/files/ENCFF334NQI/@@download/ENCFF334NQI.bigWig GRCh38 released low read depth, antibody characterized with exemption ENCFF819ZDX bigWig signal p-value ENCSR000FCC ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFE2-human ENCAB000AUE DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF121DUE, ENCFF187ZET, ENCFF198RTF, ENCFF332SVJ 1317457246 ENCODE Processing Pipeline b852dd5bdff8afbaf871030be3b98c2a https://www.encodeproject.org/files/ENCFF819ZDX/@@download/ENCFF819ZDX.bigWig GRCh38 released low read depth, antibody characterized with exemption ENCFF365EHJ bigWig fold change over control ENCSR000FCC ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFE2-human ENCAB000AUE DNA see document see document False 2014-07-07 ENCODE 1 ENCFF121DUE, ENCFF187ZET 668800142 ENCODE Processing Pipeline 9d79b746073f385f8c5b6f25333e75be https://www.encodeproject.org/files/ENCFF365EHJ/@@download/ENCFF365EHJ.bigWig GRCh38 released low read depth, antibody characterized with exemption ENCFF607GBG bigWig fold change over control ENCSR000FCC ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFE2-human ENCAB000AUE DNA see document see document False 2014-07-07 ENCODE 2 ENCFF198RTF, ENCFF332SVJ 532674576 ENCODE Processing Pipeline 374c898175afafe4a7274055125f9c07 https://www.encodeproject.org/files/ENCFF607GBG/@@download/ENCFF607GBG.bigWig GRCh38 released low read depth, antibody characterized with exemption ENCFF115ALQ bigWig fold change over control ENCSR000FCC ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFE2-human ENCAB000AUE DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF121DUE, ENCFF187ZET, ENCFF198RTF, ENCFF332SVJ 1340619794 ENCODE Processing Pipeline a96337a6ef7ebac161d129f837dab035 https://www.encodeproject.org/files/ENCFF115ALQ/@@download/ENCFF115ALQ.bigWig GRCh38 released low read depth, antibody characterized with exemption ENCFF710SZC bigBed narrowPeak peaks ENCSR000FCC ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFE2-human ENCAB000AUE DNA see document see document False 2014-07-07 ENCODE 1 ENCFF882SPG 11378532 ENCODE Processing Pipeline e6ae83a74193e3e45b96da1c26ad433c https://www.encodeproject.org/files/ENCFF710SZC/@@download/ENCFF710SZC.bigBed GRCh38 released low read depth, antibody characterized with exemption ENCFF882SPG bed narrowPeak peaks ENCSR000FCC ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFE2-human ENCAB000AUE DNA see document see document False 2014-07-07 ENCODE 1 ENCFF121DUE, ENCFF187ZET 5572049 ENCODE Processing Pipeline 8ed5f312510237898a4738a68929e967 https://www.encodeproject.org/files/ENCFF882SPG/@@download/ENCFF882SPG.bed.gz GRCh38 released low read depth, antibody characterized with exemption ENCFF710ZCP bed narrowPeak peaks ENCSR000FCC ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFE2-human ENCAB000AUE DNA see document see document False 2014-07-07 ENCODE 2 ENCFF198RTF, ENCFF332SVJ 5432172 ENCODE Processing Pipeline 9e5955d134101cef2ce371de4277f59c https://www.encodeproject.org/files/ENCFF710ZCP/@@download/ENCFF710ZCP.bed.gz GRCh38 released low read depth, antibody characterized with exemption ENCFF136HBK bigBed narrowPeak peaks ENCSR000FCC ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFE2-human ENCAB000AUE DNA see document see document False 2014-07-07 ENCODE 2 ENCFF710ZCP 11210590 ENCODE Processing Pipeline 79bdd23ac5c06a489495e0a1fa39449a https://www.encodeproject.org/files/ENCFF136HBK/@@download/ENCFF136HBK.bigBed GRCh38 released low read depth, antibody characterized with exemption ENCFF798UGB bigBed narrowPeak peaks ENCSR000FCC ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFE2-human ENCAB000AUE DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF789EHD 11590772 ENCODE Processing Pipeline 5a83db92a091c25359e3be228c7ebbae https://www.encodeproject.org/files/ENCFF798UGB/@@download/ENCFF798UGB.bigBed GRCh38 released low read depth, antibody characterized with exemption ENCFF789EHD bed narrowPeak peaks ENCSR000FCC ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFE2-human ENCAB000AUE DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF121DUE, ENCFF187ZET, ENCFF198RTF, ENCFF332SVJ 6486284 ENCODE Processing Pipeline df9a0a4c79bf348e5f98e0e651103fa7 https://www.encodeproject.org/files/ENCFF789EHD/@@download/ENCFF789EHD.bed.gz GRCh38 released low read depth, antibody characterized with exemption ENCFF370EVX bigBed narrowPeak optimal idr thresholded peaks ENCSR000FCC ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFE2-human ENCAB000AUE DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF312XHI 912088 ENCODE Processing Pipeline 5de7fd6ee5fe01ad253d7f2f1cb43dba https://www.encodeproject.org/files/ENCFF370EVX/@@download/ENCFF370EVX.bigBed GRCh38 released low read depth, antibody characterized with exemption ENCFF145JGI bed narrowPeak conservative idr thresholded peaks ENCSR000FCC ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFE2-human ENCAB000AUE DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF419RSJ, ENCFF710ZCP, ENCFF789EHD, ENCFF882SPG 443904 ENCODE Processing Pipeline 410cab9475562ecb0983a3868f1dbe82 https://www.encodeproject.org/files/ENCFF145JGI/@@download/ENCFF145JGI.bed.gz GRCh38 released low read depth, antibody characterized with exemption ENCFF804SVP bigBed narrowPeak conservative idr thresholded peaks ENCSR000FCC ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFE2-human ENCAB000AUE DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF145JGI 847483 ENCODE Processing Pipeline 3a8da997a24413d67093ad5893d0e3d8 https://www.encodeproject.org/files/ENCFF804SVP/@@download/ENCFF804SVP.bigBed GRCh38 released low read depth, antibody characterized with exemption ENCFF312XHI bed narrowPeak optimal idr thresholded peaks ENCSR000FCC ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFE2-human ENCAB000AUE DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF419RSJ, ENCFF710ZCP, ENCFF789EHD, ENCFF882SPG 496400 ENCODE Processing Pipeline e9f3b1cbd2dddf9944661d8825db571a https://www.encodeproject.org/files/ENCFF312XHI/@@download/ENCFF312XHI.bed.gz GRCh38 released low read depth, antibody characterized with exemption ENCFF665SBO bam unfiltered alignments ENCSR000FCC ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFE2-human ENCAB000AUE DNA see document see document False 2014-07-07 ENCODE 2 50 ENCFF001RUJ, ENCFF807MUK 1422918713 ENCODE Processing Pipeline dbdba334bdecee65575eaa7319c5b622 https://www.encodeproject.org/files/ENCFF665SBO/@@download/ENCFF665SBO.bam hg19 released low read depth, antibody characterized with exemption ENCFF623HFK bam unfiltered alignments ENCSR000FCC ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFE2-human ENCAB000AUE DNA see document see document False 2014-07-07 ENCODE 1 50 ENCFF001RUN, ENCFF807MUK 1913456268 ENCODE Processing Pipeline 565e56d079158a06a9a01335eb2df338 https://www.encodeproject.org/files/ENCFF623HFK/@@download/ENCFF623HFK.bam hg19 released low read depth, antibody characterized with exemption ENCFF727QOD bam alignments ENCSR000FCC ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFE2-human ENCAB000AUE DNA see document see document False 2014-07-07 ENCODE 2 50 ENCFF001RUJ, ENCFF807MUK 1066478509 ENCODE Processing Pipeline 8861d827b4a30e606583ca8c7b9c05ed https://www.encodeproject.org/files/ENCFF727QOD/@@download/ENCFF727QOD.bam hg19 released low read depth, antibody characterized with exemption ENCFF103CZU bam alignments ENCSR000FCC ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFE2-human ENCAB000AUE DNA see document see document False 2014-07-07 ENCODE 1 50 ENCFF001RUN, ENCFF807MUK 1443391674 ENCODE Processing Pipeline c74c7ca7e3c86fce1221bad9bf2922f4 https://www.encodeproject.org/files/ENCFF103CZU/@@download/ENCFF103CZU.bam hg19 released low read depth, antibody characterized with exemption ENCFF813HVG bed narrowPeak peaks ENCSR000FCC ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFE2-human ENCAB000AUE DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF061QOJ, ENCFF103CZU, ENCFF578ISP, ENCFF727QOD 6490731 ENCODE Processing Pipeline 45b800c16bc87fd82dee37aacac4f078 https://www.encodeproject.org/files/ENCFF813HVG/@@download/ENCFF813HVG.bed.gz hg19 released low read depth, antibody characterized with exemption ENCFF590LFF bigBed narrowPeak peaks ENCSR000FCC ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFE2-human ENCAB000AUE DNA see document see document False 2014-07-07 ENCODE 1 ENCFF803FZY 11382659 ENCODE Processing Pipeline 910174e2600d8985b716d6b4f3caf6a0 https://www.encodeproject.org/files/ENCFF590LFF/@@download/ENCFF590LFF.bigBed hg19 released low read depth, antibody characterized with exemption ENCFF446XRT bigBed narrowPeak peaks ENCSR000FCC ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFE2-human ENCAB000AUE DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF813HVG 11582910 ENCODE Processing Pipeline ecc8d08b7fc04d22edcdf5a532696396 https://www.encodeproject.org/files/ENCFF446XRT/@@download/ENCFF446XRT.bigBed hg19 released low read depth, antibody characterized with exemption ENCFF600LLW bigBed narrowPeak conservative idr thresholded peaks ENCSR000FCC ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFE2-human ENCAB000AUE DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF496KKT 845515 ENCODE Processing Pipeline c94bc4133f883886eaf3c3a120aebcf7 https://www.encodeproject.org/files/ENCFF600LLW/@@download/ENCFF600LLW.bigBed hg19 released low read depth, antibody characterized with exemption ENCFF772OYF bigBed narrowPeak peaks ENCSR000FCC ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFE2-human ENCAB000AUE DNA see document see document False 2014-07-07 ENCODE 2 ENCFF552ZAY 11205338 ENCODE Processing Pipeline 9a0033761843cbdc1e8f6fe34115f2c6 https://www.encodeproject.org/files/ENCFF772OYF/@@download/ENCFF772OYF.bigBed hg19 released low read depth, antibody characterized with exemption ENCFF496KKT bed narrowPeak conservative idr thresholded peaks ENCSR000FCC ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFE2-human ENCAB000AUE DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF001TDO, ENCFF552ZAY, ENCFF803FZY, ENCFF813HVG 442923 ENCODE Processing Pipeline 0dec633c4a828f77ca7f75e4fbef4747 https://www.encodeproject.org/files/ENCFF496KKT/@@download/ENCFF496KKT.bed.gz hg19 released low read depth, antibody characterized with exemption ENCFF803FZY bed narrowPeak peaks ENCSR000FCC ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFE2-human ENCAB000AUE DNA see document see document False 2014-07-07 ENCODE 1 ENCFF103CZU, ENCFF578ISP 5583357 ENCODE Processing Pipeline b465b7c2b84f5f8fb8b676d502b35b66 https://www.encodeproject.org/files/ENCFF803FZY/@@download/ENCFF803FZY.bed.gz hg19 released low read depth, antibody characterized with exemption ENCFF552ZAY bed narrowPeak peaks ENCSR000FCC ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFE2-human ENCAB000AUE DNA see document see document False 2014-07-07 ENCODE 2 ENCFF061QOJ, ENCFF727QOD 5439753 ENCODE Processing Pipeline cd17067a85d52f2050be5d06ce0f6a33 https://www.encodeproject.org/files/ENCFF552ZAY/@@download/ENCFF552ZAY.bed.gz hg19 released low read depth, antibody characterized with exemption ENCFF495MHZ bed narrowPeak optimal idr thresholded peaks ENCSR000FCC ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFE2-human ENCAB000AUE DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF001TDO, ENCFF552ZAY, ENCFF803FZY, ENCFF813HVG 486318 ENCODE Processing Pipeline 7a79922b588af54d6245ba1711aac16f https://www.encodeproject.org/files/ENCFF495MHZ/@@download/ENCFF495MHZ.bed.gz hg19 released low read depth, antibody characterized with exemption ENCFF013MKU bigBed narrowPeak optimal idr thresholded peaks ENCSR000FCC ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFE2-human ENCAB000AUE DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF495MHZ 903726 ENCODE Processing Pipeline 6a224d4da4b9339ae202c0da4da7d9c0 https://www.encodeproject.org/files/ENCFF013MKU/@@download/ENCFF013MKU.bigBed hg19 released low read depth, antibody characterized with exemption ENCFF981BKV bam unfiltered alignments ENCSR189PYJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMAD2-human ENCAB976BHH DNA False 2014-07-07 ENCODE 2 36 ENCFF002EBV, ENCFF807MUK 1249924064 ENCODE Processing Pipeline a803febb00fde30e93abfaeae9d548c4 https://www.encodeproject.org/files/ENCFF981BKV/@@download/ENCFF981BKV.bam hg19 released low read depth, mild to moderate bottlenecking, low read length ENCFF904LPN bam unfiltered alignments ENCSR189PYJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMAD2-human ENCAB976BHH DNA False 2014-07-07 ENCODE 1 36 ENCFF002EBP, ENCFF807MUK 1005002966 ENCODE Processing Pipeline 39440726df0fb899e3cda8b21126eca3 https://www.encodeproject.org/files/ENCFF904LPN/@@download/ENCFF904LPN.bam hg19 released low read depth, mild to moderate bottlenecking, low read length ENCFF408OYK bigWig signal p-value ENCSR189PYJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMAD2-human ENCAB976BHH DNA False 2014-07-07 ENCODE 1 ENCFF335IPE, ENCFF660MJY 571265803 ENCODE Processing Pipeline 783de09f5bd49467394a6310d2298f82 https://www.encodeproject.org/files/ENCFF408OYK/@@download/ENCFF408OYK.bigWig hg19 released low read depth, mild to moderate bottlenecking, low read length ENCFF233UME bigWig fold change over control ENCSR189PYJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMAD2-human ENCAB976BHH DNA False 2014-07-07 ENCODE 1 ENCFF335IPE, ENCFF660MJY 383521621 ENCODE Processing Pipeline e16c626efaea1cc9bb9949971b0eb878 https://www.encodeproject.org/files/ENCFF233UME/@@download/ENCFF233UME.bigWig hg19 released low read depth, mild to moderate bottlenecking, low read length ENCFF530QTV bigWig signal p-value ENCSR189PYJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMAD2-human ENCAB976BHH DNA False 2014-07-07 ENCODE 2 ENCFF150PLO, ENCFF879OQC 609392955 ENCODE Processing Pipeline ce1f4fb34bae820e1fd11974177dea2f https://www.encodeproject.org/files/ENCFF530QTV/@@download/ENCFF530QTV.bigWig hg19 released low read depth, mild to moderate bottlenecking, low read length ENCFF482EDG bigWig signal p-value ENCSR189PYJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMAD2-human ENCAB976BHH DNA False 2014-07-07 ENCODE 1, 2 ENCFF150PLO, ENCFF335IPE, ENCFF660MJY, ENCFF879OQC 956561197 ENCODE Processing Pipeline 4c57da7b676f8665328d8e276e9aaa2c https://www.encodeproject.org/files/ENCFF482EDG/@@download/ENCFF482EDG.bigWig hg19 released low read depth, mild to moderate bottlenecking, low read length ENCFF167LFL bigWig fold change over control ENCSR189PYJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMAD2-human ENCAB976BHH DNA False 2014-07-07 ENCODE 2 ENCFF150PLO, ENCFF879OQC 454438966 ENCODE Processing Pipeline c6c1f5fbf9344c80ce5f2c666a99be9e https://www.encodeproject.org/files/ENCFF167LFL/@@download/ENCFF167LFL.bigWig hg19 released low read depth, mild to moderate bottlenecking, low read length ENCFF217SDS bigWig fold change over control ENCSR189PYJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMAD2-human ENCAB976BHH DNA False 2014-07-07 ENCODE 1, 2 ENCFF150PLO, ENCFF335IPE, ENCFF660MJY, ENCFF879OQC 961150942 ENCODE Processing Pipeline d460e75e1ab6cb603e3ac28c5608ffce https://www.encodeproject.org/files/ENCFF217SDS/@@download/ENCFF217SDS.bigWig hg19 released low read depth, mild to moderate bottlenecking, low read length ENCFF739IDN bed narrowPeak peaks ENCSR189PYJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMAD2-human ENCAB976BHH DNA False 2014-07-07 ENCODE 1 ENCFF335IPE, ENCFF660MJY 4064192 ENCODE Processing Pipeline 10bc6a66f3210269046f7ffe893d1b3b https://www.encodeproject.org/files/ENCFF739IDN/@@download/ENCFF739IDN.bed.gz hg19 released low read depth, mild to moderate bottlenecking, low read length ENCFF397JDZ bed narrowPeak peaks ENCSR189PYJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMAD2-human ENCAB976BHH DNA False 2014-07-07 ENCODE 2 ENCFF150PLO, ENCFF879OQC 4084696 ENCODE Processing Pipeline 7bc6cca12ce76a4feb5c4840ecc95620 https://www.encodeproject.org/files/ENCFF397JDZ/@@download/ENCFF397JDZ.bed.gz hg19 released low read depth, mild to moderate bottlenecking, low read length ENCFF382SAW bed narrowPeak peaks ENCSR189PYJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMAD2-human ENCAB976BHH DNA False 2014-07-07 ENCODE 1, 2 ENCFF150PLO, ENCFF335IPE, ENCFF660MJY, ENCFF879OQC 5404432 ENCODE Processing Pipeline 7f4fc156441552ab0a9f437307117ad5 https://www.encodeproject.org/files/ENCFF382SAW/@@download/ENCFF382SAW.bed.gz hg19 released low read depth, mild to moderate bottlenecking, low read length ENCFF433IXI bigBed narrowPeak peaks ENCSR189PYJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMAD2-human ENCAB976BHH DNA False 2014-07-07 ENCODE 2 ENCFF397JDZ 10620761 ENCODE Processing Pipeline eddf3cf661adace176977a212950918b https://www.encodeproject.org/files/ENCFF433IXI/@@download/ENCFF433IXI.bigBed hg19 released low read depth, mild to moderate bottlenecking, low read length ENCFF154IXU bed narrowPeak conservative idr thresholded peaks ENCSR189PYJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMAD2-human ENCAB976BHH DNA False 2014-07-07 ENCODE 1, 2 ENCFF001TDO, ENCFF382SAW, ENCFF397JDZ, ENCFF739IDN 2019 ENCODE Processing Pipeline f41241ac6b88cf8aa87bbed9dfad5af2 https://www.encodeproject.org/files/ENCFF154IXU/@@download/ENCFF154IXU.bed.gz hg19 released low read depth, mild to moderate bottlenecking, low read length ENCFF604PVX bigBed narrowPeak optimal idr thresholded peaks ENCSR189PYJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMAD2-human ENCAB976BHH DNA False 2014-07-07 ENCODE 1, 2 ENCFF011KRN 63823 ENCODE Processing Pipeline f6f74c7ea2b4a9b20b41f5f396a7db07 https://www.encodeproject.org/files/ENCFF604PVX/@@download/ENCFF604PVX.bigBed hg19 released low read depth, mild to moderate bottlenecking, low read length ENCFF677DTP bigBed narrowPeak peaks ENCSR189PYJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMAD2-human ENCAB976BHH DNA False 2014-07-07 ENCODE 1 ENCFF739IDN 10362108 ENCODE Processing Pipeline cc35d0a9cdf66bc850e83108d9195fa1 https://www.encodeproject.org/files/ENCFF677DTP/@@download/ENCFF677DTP.bigBed hg19 released low read depth, mild to moderate bottlenecking, low read length ENCFF290GDM bigBed narrowPeak conservative idr thresholded peaks ENCSR189PYJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMAD2-human ENCAB976BHH DNA False 2014-07-07 ENCODE 1, 2 ENCFF154IXU 72087 ENCODE Processing Pipeline ee95d6223ad3d7924072d4a0296ddf5a https://www.encodeproject.org/files/ENCFF290GDM/@@download/ENCFF290GDM.bigBed hg19 released low read depth, mild to moderate bottlenecking, low read length ENCFF870THJ bigBed narrowPeak peaks ENCSR189PYJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMAD2-human ENCAB976BHH DNA False 2014-07-07 ENCODE 1, 2 ENCFF382SAW 11313561 ENCODE Processing Pipeline c23fedaf304ab596bccf870a76786192 https://www.encodeproject.org/files/ENCFF870THJ/@@download/ENCFF870THJ.bigBed hg19 released low read depth, mild to moderate bottlenecking, low read length ENCFF011KRN bed narrowPeak optimal idr thresholded peaks ENCSR189PYJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMAD2-human ENCAB976BHH DNA False 2014-07-07 ENCODE 1, 2 ENCFF001TDO, ENCFF382SAW, ENCFF397JDZ, ENCFF739IDN 4102 ENCODE Processing Pipeline 860948dc5236c346a8d693f201db3312 https://www.encodeproject.org/files/ENCFF011KRN/@@download/ENCFF011KRN.bed.gz hg19 released low read depth, mild to moderate bottlenecking, low read length ENCFF002EBP fastq reads ENCSR189PYJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMAD2-human ENCAB976BHH DNA False 2014-07-07 ENCODE 1 1 36 single-ended 699198044 Michael Snyder, Stanford 800c12b25b677b3dc5e2157e4ba39734 SRA:SRR5111229 https://www.encodeproject.org/files/ENCFF002EBP/@@download/ENCFF002EBP.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF002ECW/ released low read depth, mild to moderate bottlenecking, low read length ENCFF002EBV fastq reads ENCSR189PYJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMAD2-human ENCAB976BHH DNA False 2014-07-07 ENCODE 2 1 36 single-ended 895697534 Michael Snyder, Stanford 66be25cc5c64984b95483b5928b98ede SRA:SRR5111228 https://www.encodeproject.org/files/ENCFF002EBV/@@download/ENCFF002EBV.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF002ECS/ released low read depth, mild to moderate bottlenecking, low read length ENCFF660MJY bam alignments ENCSR189PYJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMAD2-human ENCAB976BHH DNA False 2014-07-07 ENCODE 1 36 ENCFF002EBP, ENCFF807MUK 641650610 ENCODE Processing Pipeline dcd263b32298109cdff9cc1a3af43525 https://www.encodeproject.org/files/ENCFF660MJY/@@download/ENCFF660MJY.bam hg19 released low read depth, mild to moderate bottlenecking, low read length ENCFF150PLO bam alignments ENCSR189PYJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMAD2-human ENCAB976BHH DNA False 2014-07-07 ENCODE 2 36 ENCFF002EBV, ENCFF807MUK 813102768 ENCODE Processing Pipeline 39e7649a8f29ce153a68368580f7ef3b https://www.encodeproject.org/files/ENCFF150PLO/@@download/ENCFF150PLO.bam hg19 released low read depth, mild to moderate bottlenecking, low read length ENCFF296UGS bigWig signal p-value ENCSR189PYJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMAD2-human ENCAB976BHH DNA False 2014-07-07 ENCODE 1 ENCFF335IPE, ENCFF660MJY 567227192 ENCODE Processing Pipeline 1efe3ff0bb8b40097af8965a702bcf46 https://www.encodeproject.org/files/ENCFF296UGS/@@download/ENCFF296UGS.bigWig hg19 archived low read depth, mild to moderate bottlenecking, low read length ENCFF502NZP bigWig signal p-value ENCSR189PYJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMAD2-human ENCAB976BHH DNA False 2014-07-07 ENCODE 2 ENCFF150PLO, ENCFF879OQC 618648128 ENCODE Processing Pipeline 654838ad2f5e2904daed10edf9aa123d https://www.encodeproject.org/files/ENCFF502NZP/@@download/ENCFF502NZP.bigWig hg19 archived low read depth, mild to moderate bottlenecking, low read length ENCFF683RAO bigWig signal p-value ENCSR189PYJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMAD2-human ENCAB976BHH DNA False 2014-07-07 ENCODE 1, 2 ENCFF150PLO, ENCFF335IPE, ENCFF660MJY, ENCFF879OQC 959480688 ENCODE Processing Pipeline 4b18fbff6679b525ac89c064cc0e5fc0 https://www.encodeproject.org/files/ENCFF683RAO/@@download/ENCFF683RAO.bigWig hg19 archived low read depth, mild to moderate bottlenecking, low read length ENCFF330MUY bigWig fold change over control ENCSR189PYJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMAD2-human ENCAB976BHH DNA False 2014-07-07 ENCODE 1 ENCFF335IPE, ENCFF660MJY 386516967 ENCODE Processing Pipeline 0928d22c7927a6b4be973dae7720b828 https://www.encodeproject.org/files/ENCFF330MUY/@@download/ENCFF330MUY.bigWig hg19 archived low read depth, mild to moderate bottlenecking, low read length ENCFF740KYD bigWig fold change over control ENCSR189PYJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMAD2-human ENCAB976BHH DNA False 2014-07-07 ENCODE 2 ENCFF150PLO, ENCFF879OQC 476552568 ENCODE Processing Pipeline fce5dddb55e04af0453ed7e59965e073 https://www.encodeproject.org/files/ENCFF740KYD/@@download/ENCFF740KYD.bigWig hg19 archived low read depth, mild to moderate bottlenecking, low read length ENCFF437PDZ bigWig fold change over control ENCSR189PYJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMAD2-human ENCAB976BHH DNA False 2014-07-07 ENCODE 1, 2 ENCFF150PLO, ENCFF335IPE, ENCFF660MJY, ENCFF879OQC 949574452 ENCODE Processing Pipeline d71dcccc8c49e1cf611558b3a3bfe167 https://www.encodeproject.org/files/ENCFF437PDZ/@@download/ENCFF437PDZ.bigWig hg19 archived low read depth, mild to moderate bottlenecking, low read length ENCFF181NNV bed narrowPeak peaks ENCSR189PYJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMAD2-human ENCAB976BHH DNA False 2014-07-07 ENCODE 1, 2 ENCFF150PLO, ENCFF335IPE, ENCFF660MJY, ENCFF879OQC 5633586 ENCODE Processing Pipeline bf9643e4324ed066be22a990eb61e8f0 https://www.encodeproject.org/files/ENCFF181NNV/@@download/ENCFF181NNV.bed.gz hg19 archived low read depth, mild to moderate bottlenecking, low read length ENCFF688TJX bed narrowPeak peaks ENCSR189PYJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMAD2-human ENCAB976BHH DNA False 2014-07-07 ENCODE 1 ENCFF335IPE, ENCFF660MJY 4209685 ENCODE Processing Pipeline 99e76d8e305893efffbd5686a4d47778 https://www.encodeproject.org/files/ENCFF688TJX/@@download/ENCFF688TJX.bed.gz hg19 archived low read depth, mild to moderate bottlenecking, low read length ENCFF259CSU bigBed narrowPeak peaks ENCSR189PYJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMAD2-human ENCAB976BHH DNA False 2014-07-07 ENCODE 1 ENCFF688TJX 10587693 ENCODE Processing Pipeline 364b697540222458bc602e6d742b1f57 https://www.encodeproject.org/files/ENCFF259CSU/@@download/ENCFF259CSU.bigBed hg19 archived low read depth, mild to moderate bottlenecking, low read length ENCFF292NAI bed narrowPeak peaks ENCSR189PYJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMAD2-human ENCAB976BHH DNA False 2014-07-07 ENCODE 2 ENCFF150PLO, ENCFF879OQC 4277069 ENCODE Processing Pipeline 3e2b5051cc3a350a4bd7cd2457d15ab5 https://www.encodeproject.org/files/ENCFF292NAI/@@download/ENCFF292NAI.bed.gz hg19 archived low read depth, mild to moderate bottlenecking, low read length ENCFF107EBJ bigBed narrowPeak peaks ENCSR189PYJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMAD2-human ENCAB976BHH DNA False 2014-07-07 ENCODE 2 ENCFF292NAI 10893614 ENCODE Processing Pipeline b2f113c7dd83b8226d7e65f8e9139d20 https://www.encodeproject.org/files/ENCFF107EBJ/@@download/ENCFF107EBJ.bigBed hg19 archived low read depth, mild to moderate bottlenecking, low read length ENCFF493SUS bigBed narrowPeak peaks ENCSR189PYJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMAD2-human ENCAB976BHH DNA False 2014-07-07 ENCODE 1, 2 ENCFF181NNV 11368021 ENCODE Processing Pipeline 48774368fe462622ceb335d296554de9 https://www.encodeproject.org/files/ENCFF493SUS/@@download/ENCFF493SUS.bigBed hg19 archived low read depth, mild to moderate bottlenecking, low read length ENCFF939IYF bam unfiltered alignments ENCSR189PYJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMAD2-human ENCAB976BHH DNA False 2014-07-07 ENCODE 1 36 ENCFF002EBP, ENCFF643CGH 1009640727 ENCODE Processing Pipeline 094a7b7ebae17796f424d7429a72ed34 https://www.encodeproject.org/files/ENCFF939IYF/@@download/ENCFF939IYF.bam GRCh38 released low read depth, mild to moderate bottlenecking, low read length ENCFF610XND bam unfiltered alignments ENCSR189PYJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMAD2-human ENCAB976BHH DNA False 2014-07-07 ENCODE 2 36 ENCFF002EBV, ENCFF643CGH 1255710655 ENCODE Processing Pipeline 8c7482bb5496c7e8856a6b1e29ec4172 https://www.encodeproject.org/files/ENCFF610XND/@@download/ENCFF610XND.bam GRCh38 released low read depth, mild to moderate bottlenecking, low read length ENCFF257QQX bam alignments ENCSR189PYJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMAD2-human ENCAB976BHH DNA False 2014-07-07 ENCODE 1 36 ENCFF002EBP, ENCFF643CGH 641177525 ENCODE Processing Pipeline 35fb1455742e9cfd2af350a3888122be https://www.encodeproject.org/files/ENCFF257QQX/@@download/ENCFF257QQX.bam GRCh38 released low read depth, mild to moderate bottlenecking, low read length ENCFF925CYF bam alignments ENCSR189PYJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMAD2-human ENCAB976BHH DNA False 2014-07-07 ENCODE 2 36 ENCFF002EBV, ENCFF643CGH 812534292 ENCODE Processing Pipeline d1392d1c9d96f6b0116765e7e32aad96 https://www.encodeproject.org/files/ENCFF925CYF/@@download/ENCFF925CYF.bam GRCh38 released low read depth, mild to moderate bottlenecking, low read length ENCFF412SNY bigWig signal p-value ENCSR189PYJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMAD2-human ENCAB976BHH DNA False 2014-07-07 ENCODE 1 ENCFF156FED, ENCFF257QQX 533501996 ENCODE Processing Pipeline 47a7701e8a3399ba8d74ffd640530cb8 https://www.encodeproject.org/files/ENCFF412SNY/@@download/ENCFF412SNY.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, low read length ENCFF079JPT bigWig signal p-value ENCSR189PYJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMAD2-human ENCAB976BHH DNA False 2014-07-07 ENCODE 2 ENCFF577FNG, ENCFF925CYF 472240534 ENCODE Processing Pipeline 8495c3de4657ded8fb3cba0eb396944b https://www.encodeproject.org/files/ENCFF079JPT/@@download/ENCFF079JPT.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, low read length ENCFF538NZJ bigWig signal p-value ENCSR189PYJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMAD2-human ENCAB976BHH DNA False 2014-07-07 ENCODE 1, 2 ENCFF156FED, ENCFF257QQX, ENCFF577FNG, ENCFF925CYF 993578410 ENCODE Processing Pipeline be4e32ccd1060853078a4cc83508456a https://www.encodeproject.org/files/ENCFF538NZJ/@@download/ENCFF538NZJ.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, low read length ENCFF792JXT bigWig fold change over control ENCSR189PYJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMAD2-human ENCAB976BHH DNA False 2014-07-07 ENCODE 1 ENCFF156FED, ENCFF257QQX 388578852 ENCODE Processing Pipeline 752d75da8a6d4bef7de3659f1ff25dc3 https://www.encodeproject.org/files/ENCFF792JXT/@@download/ENCFF792JXT.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, low read length ENCFF770TTW bigWig fold change over control ENCSR189PYJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMAD2-human ENCAB976BHH DNA False 2014-07-07 ENCODE 2 ENCFF577FNG, ENCFF925CYF 468865638 ENCODE Processing Pipeline 1841aadb211c1f1bab9c21af69a860d5 https://www.encodeproject.org/files/ENCFF770TTW/@@download/ENCFF770TTW.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, low read length ENCFF615WRA bigWig fold change over control ENCSR189PYJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMAD2-human ENCAB976BHH DNA False 2014-07-07 ENCODE 1, 2 ENCFF156FED, ENCFF257QQX, ENCFF577FNG, ENCFF925CYF 980475616 ENCODE Processing Pipeline 9203d138810a5ae578ec49e26781050c https://www.encodeproject.org/files/ENCFF615WRA/@@download/ENCFF615WRA.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, low read length ENCFF483AVE bed narrowPeak peaks ENCSR189PYJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMAD2-human ENCAB976BHH DNA False 2014-07-07 ENCODE 2 ENCFF577FNG, ENCFF925CYF 4078694 ENCODE Processing Pipeline c1a56fea78e8144600e1f12369ef6cf9 https://www.encodeproject.org/files/ENCFF483AVE/@@download/ENCFF483AVE.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, low read length ENCFF527XGE bed narrowPeak peaks ENCSR189PYJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMAD2-human ENCAB976BHH DNA False 2014-07-07 ENCODE 1 ENCFF156FED, ENCFF257QQX 4058451 ENCODE Processing Pipeline 9b2617dc9392137a9af23097f5df0869 https://www.encodeproject.org/files/ENCFF527XGE/@@download/ENCFF527XGE.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, low read length ENCFF826QOQ bed narrowPeak peaks ENCSR189PYJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMAD2-human ENCAB976BHH DNA False 2014-07-07 ENCODE 1, 2 ENCFF156FED, ENCFF257QQX, ENCFF577FNG, ENCFF925CYF 5319665 ENCODE Processing Pipeline f529bb96d7a45d74efdcdf9788a64297 https://www.encodeproject.org/files/ENCFF826QOQ/@@download/ENCFF826QOQ.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, low read length ENCFF863GGY bigBed narrowPeak peaks ENCSR189PYJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMAD2-human ENCAB976BHH DNA False 2014-07-07 ENCODE 1 ENCFF527XGE 10361108 ENCODE Processing Pipeline a001558635d30c107ed81f62117d3885 https://www.encodeproject.org/files/ENCFF863GGY/@@download/ENCFF863GGY.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, low read length ENCFF751GQQ bigBed narrowPeak peaks ENCSR189PYJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMAD2-human ENCAB976BHH DNA False 2014-07-07 ENCODE 2 ENCFF483AVE 10642562 ENCODE Processing Pipeline 0912fb1483719189738d2a98b03c3b8b https://www.encodeproject.org/files/ENCFF751GQQ/@@download/ENCFF751GQQ.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, low read length ENCFF927TIR bigBed narrowPeak peaks ENCSR189PYJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMAD2-human ENCAB976BHH DNA False 2014-07-07 ENCODE 1, 2 ENCFF826QOQ 11355431 ENCODE Processing Pipeline eca365643157454cf133a42417e81815 https://www.encodeproject.org/files/ENCFF927TIR/@@download/ENCFF927TIR.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, low read length ENCFF056LZZ bed narrowPeak conservative idr thresholded peaks ENCSR189PYJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMAD2-human ENCAB976BHH DNA False 2014-07-07 ENCODE 1, 2 ENCFF419RSJ, ENCFF483AVE, ENCFF527XGE, ENCFF826QOQ 1975 ENCODE Processing Pipeline abe16d70db6d7a3517d4fbd275899bed https://www.encodeproject.org/files/ENCFF056LZZ/@@download/ENCFF056LZZ.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, low read length ENCFF082LUZ bigBed narrowPeak conservative idr thresholded peaks ENCSR189PYJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMAD2-human ENCAB976BHH DNA False 2014-07-07 ENCODE 1, 2 ENCFF056LZZ 78922 ENCODE Processing Pipeline 9db4aa3e4c098104921482354b864b83 https://www.encodeproject.org/files/ENCFF082LUZ/@@download/ENCFF082LUZ.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, low read length ENCFF186MFI bed narrowPeak optimal idr thresholded peaks ENCSR189PYJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMAD2-human ENCAB976BHH DNA False 2014-07-07 ENCODE 1, 2 ENCFF419RSJ, ENCFF483AVE, ENCFF527XGE, ENCFF826QOQ 3663 ENCODE Processing Pipeline 4f7ac6d1c8c85892792cdff04e1d7c4a https://www.encodeproject.org/files/ENCFF186MFI/@@download/ENCFF186MFI.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, low read length ENCFF920WQS bigBed narrowPeak optimal idr thresholded peaks ENCSR189PYJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMAD2-human ENCAB976BHH DNA False 2014-07-07 ENCODE 1, 2 ENCFF186MFI 69870 ENCODE Processing Pipeline f35c4181b7422905fb58c41302974994 https://www.encodeproject.org/files/ENCFF920WQS/@@download/ENCFF920WQS.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, low read length ENCFF665VTI bed narrowPeak conservative idr thresholded peaks ENCSR189PYJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMAD2-human ENCAB976BHH DNA False 2014-07-07 ENCODE 1, 2 ENCFF001TDO, ENCFF181NNV, ENCFF292NAI, ENCFF688TJX 1656 ENCODE Processing Pipeline 442ee9ea6411079615fc9490034b8777 https://www.encodeproject.org/files/ENCFF665VTI/@@download/ENCFF665VTI.bed.gz hg19 archived low read depth, mild to moderate bottlenecking, low read length ENCFF819AQD bigBed narrowPeak optimal idr thresholded peaks ENCSR189PYJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMAD2-human ENCAB976BHH DNA False 2014-07-07 ENCODE 1, 2 ENCFF870PWV 54204 ENCODE Processing Pipeline ebdd0689e4f53d333c276f97dc44a321 https://www.encodeproject.org/files/ENCFF819AQD/@@download/ENCFF819AQD.bigBed hg19 archived low read depth, mild to moderate bottlenecking, low read length ENCFF870PWV bed narrowPeak optimal idr thresholded peaks ENCSR189PYJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMAD2-human ENCAB976BHH DNA False 2014-07-07 ENCODE 1, 2 ENCFF001TDO, ENCFF181NNV, ENCFF292NAI, ENCFF688TJX 3045 ENCODE Processing Pipeline 986967daa8d46a11dc6651f790c0f80b https://www.encodeproject.org/files/ENCFF870PWV/@@download/ENCFF870PWV.bed.gz hg19 archived low read depth, mild to moderate bottlenecking, low read length ENCFF471QHB bigBed narrowPeak conservative idr thresholded peaks ENCSR189PYJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMAD2-human ENCAB976BHH DNA False 2014-07-07 ENCODE 1, 2 ENCFF665VTI 57361 ENCODE Processing Pipeline cddb346486e6ee6f9848e4140d2fc218 https://www.encodeproject.org/files/ENCFF471QHB/@@download/ENCFF471QHB.bigBed hg19 archived low read depth, mild to moderate bottlenecking, low read length ENCFF002DPL fastq reads ENCSR991ELG ChIP-seq EFO:0002067 K562 cell line Homo sapiens SP1-human ENCAB000BAV DNA False 2014-07-07 ENCODE 1 1 100 paired-ended 1 ENCFF002EGC 1481114696 Michael Snyder, Stanford 32b50adfd7369a13c6e8b0cff55d0bd4 SRA:SRR5112370 https://www.encodeproject.org/files/ENCFF002DPL/@@download/ENCFF002DPL.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFF/ released low read depth, mild to moderate bottlenecking ENCFF002DPP fastq reads ENCSR991ELG ChIP-seq EFO:0002067 K562 cell line Homo sapiens SP1-human ENCAB000BAV DNA False 2014-07-07 ENCODE 2 1 100 paired-ended 2 ENCFF002EGO 3319400152 Michael Snyder, Stanford 8fb7a1b25857a1f93eb4620b02fce726 SRA:SRR5112369 https://www.encodeproject.org/files/ENCFF002DPP/@@download/ENCFF002DPP.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFA/ released low read depth, mild to moderate bottlenecking ENCFF002EGC fastq reads ENCSR991ELG ChIP-seq EFO:0002067 K562 cell line Homo sapiens SP1-human ENCAB000BAV DNA False 2014-07-07 ENCODE 1 1 100 paired-ended 2 ENCFF002DPL 1515715500 Michael Snyder, Stanford 24fa2b11733944e5d1084f166439ea81 SRA:SRR5112370 https://www.encodeproject.org/files/ENCFF002EGC/@@download/ENCFF002EGC.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFH/ released low read depth, mild to moderate bottlenecking ENCFF002EGO fastq reads ENCSR991ELG ChIP-seq EFO:0002067 K562 cell line Homo sapiens SP1-human ENCAB000BAV DNA False 2014-07-07 ENCODE 2 1 100 paired-ended 1 ENCFF002DPP 3301886345 Michael Snyder, Stanford 6037366abea9b9f8635591e5fcb74c57 SRA:SRR5112369 https://www.encodeproject.org/files/ENCFF002EGO/@@download/ENCFF002EGO.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFD/ released low read depth, mild to moderate bottlenecking ENCFF541UXW bam alignments ENCSR991ELG ChIP-seq EFO:0002067 K562 cell line Homo sapiens SP1-human ENCAB000BAV DNA False 2014-07-07 ENCODE 2 100 ENCFF002DPP, ENCFF002EGO, ENCFF807MUK 5342016924 ENCODE Processing Pipeline 17777c98d6e0044395d20fe485ca784e https://www.encodeproject.org/files/ENCFF541UXW/@@download/ENCFF541UXW.bam hg19 released low read depth, mild to moderate bottlenecking ENCFF545HSY bam alignments ENCSR991ELG ChIP-seq EFO:0002067 K562 cell line Homo sapiens SP1-human ENCAB000BAV DNA False 2014-07-07 ENCODE 1 100 ENCFF002DPL, ENCFF002EGC, ENCFF807MUK 2731161346 ENCODE Processing Pipeline bdaeb2893732e3beeed66a0485cdef51 https://www.encodeproject.org/files/ENCFF545HSY/@@download/ENCFF545HSY.bam hg19 released low read depth, mild to moderate bottlenecking ENCFF254OXE bigBed narrowPeak peaks ENCSR991ELG ChIP-seq EFO:0002067 K562 cell line Homo sapiens SP1-human ENCAB000BAV DNA False 2014-07-07 ENCODE 1, 2 ENCFF459WKK 13207127 ENCODE Processing Pipeline 7ef4464f935c665db333315b339d1ac5 https://www.encodeproject.org/files/ENCFF254OXE/@@download/ENCFF254OXE.bigBed hg19 archived low read depth, mild to moderate bottlenecking ENCFF705YWG bigWig signal p-value ENCSR991ELG ChIP-seq EFO:0002067 K562 cell line Homo sapiens SP1-human ENCAB000BAV DNA False 2014-07-07 ENCODE 1 ENCFF545HSY, ENCFF581ZJL 1109341753 ENCODE Processing Pipeline cc64169409efcb72bd6ecb0042ea85da https://www.encodeproject.org/files/ENCFF705YWG/@@download/ENCFF705YWG.bigWig hg19 released low read depth, mild to moderate bottlenecking ENCFF937KOI bigWig signal p-value ENCSR991ELG ChIP-seq EFO:0002067 K562 cell line Homo sapiens SP1-human ENCAB000BAV DNA False 2014-07-07 ENCODE 2 ENCFF051LWI, ENCFF541UXW 1293814215 ENCODE Processing Pipeline f7b69b944a062fddfd2bcf658778ce5f https://www.encodeproject.org/files/ENCFF937KOI/@@download/ENCFF937KOI.bigWig hg19 released low read depth, mild to moderate bottlenecking ENCFF095MOZ bigWig signal p-value ENCSR991ELG ChIP-seq EFO:0002067 K562 cell line Homo sapiens SP1-human ENCAB000BAV DNA False 2014-07-07 ENCODE 1, 2 ENCFF051LWI, ENCFF541UXW, ENCFF545HSY, ENCFF581ZJL 1932750727 ENCODE Processing Pipeline b1b6df54eb216f54dd60d118f0486290 https://www.encodeproject.org/files/ENCFF095MOZ/@@download/ENCFF095MOZ.bigWig hg19 archived low read depth, mild to moderate bottlenecking ENCFF699WES bed narrowPeak peaks ENCSR991ELG ChIP-seq EFO:0002067 K562 cell line Homo sapiens SP1-human ENCAB000BAV DNA False 2014-07-07 ENCODE 2 ENCFF051LWI, ENCFF541UXW 6803821 ENCODE Processing Pipeline 30f8a9e2d5f84d79f7c8112a89120a22 https://www.encodeproject.org/files/ENCFF699WES/@@download/ENCFF699WES.bed.gz hg19 archived low read depth, mild to moderate bottlenecking ENCFF459WKK bed narrowPeak peaks ENCSR991ELG ChIP-seq EFO:0002067 K562 cell line Homo sapiens SP1-human ENCAB000BAV DNA False 2014-07-07 ENCODE 1, 2 ENCFF051LWI, ENCFF541UXW, ENCFF545HSY, ENCFF581ZJL 7190556 ENCODE Processing Pipeline 7c3e23942b93b36f294f4ea77bdfe10c https://www.encodeproject.org/files/ENCFF459WKK/@@download/ENCFF459WKK.bed.gz hg19 archived low read depth, mild to moderate bottlenecking ENCFF852GWP bigWig fold change over control ENCSR991ELG ChIP-seq EFO:0002067 K562 cell line Homo sapiens SP1-human ENCAB000BAV DNA False 2014-07-07 ENCODE 1 ENCFF545HSY, ENCFF581ZJL 960519104 ENCODE Processing Pipeline d9b65a97e2392cd7d652b0256661ef54 https://www.encodeproject.org/files/ENCFF852GWP/@@download/ENCFF852GWP.bigWig hg19 released low read depth, mild to moderate bottlenecking ENCFF460URK bigWig fold change over control ENCSR991ELG ChIP-seq EFO:0002067 K562 cell line Homo sapiens SP1-human ENCAB000BAV DNA False 2014-07-07 ENCODE 2 ENCFF051LWI, ENCFF541UXW 1328185447 ENCODE Processing Pipeline 4f392d33c7d4891916e648f5cc1065c8 https://www.encodeproject.org/files/ENCFF460URK/@@download/ENCFF460URK.bigWig hg19 released low read depth, mild to moderate bottlenecking ENCFF858NSY bigWig fold change over control ENCSR991ELG ChIP-seq EFO:0002067 K562 cell line Homo sapiens SP1-human ENCAB000BAV DNA False 2014-07-07 ENCODE 1, 2 ENCFF051LWI, ENCFF541UXW, ENCFF545HSY, ENCFF581ZJL 2087517108 ENCODE Processing Pipeline ec63f8113ff89537f4bc35d15d011ac5 https://www.encodeproject.org/files/ENCFF858NSY/@@download/ENCFF858NSY.bigWig hg19 archived low read depth, mild to moderate bottlenecking ENCFF422VXS bed narrowPeak peaks ENCSR991ELG ChIP-seq EFO:0002067 K562 cell line Homo sapiens SP1-human ENCAB000BAV DNA False 2014-07-07 ENCODE 1 ENCFF545HSY, ENCFF581ZJL 6568266 ENCODE Processing Pipeline ec5244eb4f12cadf3aca61e411e7ab61 https://www.encodeproject.org/files/ENCFF422VXS/@@download/ENCFF422VXS.bed.gz hg19 archived low read depth, mild to moderate bottlenecking ENCFF638ARM bigBed narrowPeak peaks ENCSR991ELG ChIP-seq EFO:0002067 K562 cell line Homo sapiens SP1-human ENCAB000BAV DNA False 2014-07-07 ENCODE 2 ENCFF699WES 13210117 ENCODE Processing Pipeline 0a62e8bcefe5278457593c3069e6bc84 https://www.encodeproject.org/files/ENCFF638ARM/@@download/ENCFF638ARM.bigBed hg19 archived low read depth, mild to moderate bottlenecking ENCFF218MUY bigBed narrowPeak peaks ENCSR991ELG ChIP-seq EFO:0002067 K562 cell line Homo sapiens SP1-human ENCAB000BAV DNA False 2014-07-07 ENCODE 1 ENCFF422VXS 13382305 ENCODE Processing Pipeline 7a20ac445c495e6835032bf66f462d8a https://www.encodeproject.org/files/ENCFF218MUY/@@download/ENCFF218MUY.bigBed hg19 archived low read depth, mild to moderate bottlenecking ENCFF644YVO bam unfiltered alignments ENCSR991ELG ChIP-seq EFO:0002067 K562 cell line Homo sapiens SP1-human ENCAB000BAV DNA False 2014-07-07 ENCODE 1 100 ENCFF002DPL, ENCFF002EGC, ENCFF643CGH 3323120150 ENCODE Processing Pipeline ef5e58caba41f5c8c3808dd4808a5ede https://www.encodeproject.org/files/ENCFF644YVO/@@download/ENCFF644YVO.bam GRCh38 released low read depth, mild to moderate bottlenecking ENCFF487SUP bam alignments ENCSR991ELG ChIP-seq EFO:0002067 K562 cell line Homo sapiens SP1-human ENCAB000BAV DNA False 2014-07-07 ENCODE 1 100 ENCFF002DPL, ENCFF002EGC, ENCFF643CGH 2732703193 ENCODE Processing Pipeline c7a46eba493e27845421b35c488004b3 https://www.encodeproject.org/files/ENCFF487SUP/@@download/ENCFF487SUP.bam GRCh38 released low read depth, mild to moderate bottlenecking ENCFF362NJN bam unfiltered alignments ENCSR991ELG ChIP-seq EFO:0002067 K562 cell line Homo sapiens SP1-human ENCAB000BAV DNA False 2014-07-07 ENCODE 2 100 ENCFF002DPP, ENCFF002EGO, ENCFF643CGH 7002165950 ENCODE Processing Pipeline 48b19b44d47c07fd9825d13aa0f2ad9e https://www.encodeproject.org/files/ENCFF362NJN/@@download/ENCFF362NJN.bam GRCh38 released low read depth, mild to moderate bottlenecking ENCFF758LME bam alignments ENCSR991ELG ChIP-seq EFO:0002067 K562 cell line Homo sapiens SP1-human ENCAB000BAV DNA False 2014-07-07 ENCODE 2 100 ENCFF002DPP, ENCFF002EGO, ENCFF643CGH 5345463115 ENCODE Processing Pipeline c644eafe702ae5e1f220bd1b19b15b01 https://www.encodeproject.org/files/ENCFF758LME/@@download/ENCFF758LME.bam GRCh38 released low read depth, mild to moderate bottlenecking ENCFF535EXG bigWig signal p-value ENCSR991ELG ChIP-seq EFO:0002067 K562 cell line Homo sapiens SP1-human ENCAB000BAV DNA False 2014-07-07 ENCODE 1 ENCFF487SUP, ENCFF910IKB 1046656279 ENCODE Processing Pipeline 90ac4858e0d69446662f9d0850fd6aed https://www.encodeproject.org/files/ENCFF535EXG/@@download/ENCFF535EXG.bigWig GRCh38 released low read depth, mild to moderate bottlenecking ENCFF080JAQ bigWig signal p-value ENCSR991ELG ChIP-seq EFO:0002067 K562 cell line Homo sapiens SP1-human ENCAB000BAV DNA False 2014-07-07 ENCODE 2 ENCFF227IZS, ENCFF758LME 1158453726 ENCODE Processing Pipeline 88f5ca23cac04efe7bf79962e861b680 https://www.encodeproject.org/files/ENCFF080JAQ/@@download/ENCFF080JAQ.bigWig GRCh38 released low read depth, mild to moderate bottlenecking ENCFF470GKX bigWig signal p-value ENCSR991ELG ChIP-seq EFO:0002067 K562 cell line Homo sapiens SP1-human ENCAB000BAV DNA False 2014-07-07 ENCODE 1, 2 ENCFF227IZS, ENCFF487SUP, ENCFF758LME, ENCFF910IKB 1986738276 ENCODE Processing Pipeline a1f07d44adc08f1539d0b60144336c4c https://www.encodeproject.org/files/ENCFF470GKX/@@download/ENCFF470GKX.bigWig GRCh38 released low read depth, mild to moderate bottlenecking ENCFF393LAG bigWig fold change over control ENCSR991ELG ChIP-seq EFO:0002067 K562 cell line Homo sapiens SP1-human ENCAB000BAV DNA False 2014-07-07 ENCODE 1 ENCFF487SUP, ENCFF910IKB 964538445 ENCODE Processing Pipeline 906fe6d71704cf744074b12ea1523702 https://www.encodeproject.org/files/ENCFF393LAG/@@download/ENCFF393LAG.bigWig GRCh38 released low read depth, mild to moderate bottlenecking ENCFF959WMB bigWig fold change over control ENCSR991ELG ChIP-seq EFO:0002067 K562 cell line Homo sapiens SP1-human ENCAB000BAV DNA False 2014-07-07 ENCODE 2 ENCFF227IZS, ENCFF758LME 1331575674 ENCODE Processing Pipeline 57b2f040b0a2d90fa26ffbd274dd8042 https://www.encodeproject.org/files/ENCFF959WMB/@@download/ENCFF959WMB.bigWig GRCh38 released low read depth, mild to moderate bottlenecking ENCFF949TXJ bigWig fold change over control ENCSR991ELG ChIP-seq EFO:0002067 K562 cell line Homo sapiens SP1-human ENCAB000BAV DNA False 2014-07-07 ENCODE 1, 2 ENCFF227IZS, ENCFF487SUP, ENCFF758LME, ENCFF910IKB 2102245040 ENCODE Processing Pipeline 0ee3dec401537410369b2ce8819c0f1b https://www.encodeproject.org/files/ENCFF949TXJ/@@download/ENCFF949TXJ.bigWig GRCh38 released low read depth, mild to moderate bottlenecking ENCFF385WQK bigBed narrowPeak peaks ENCSR991ELG ChIP-seq EFO:0002067 K562 cell line Homo sapiens SP1-human ENCAB000BAV DNA False 2014-07-07 ENCODE 2 ENCFF442GMI 11051410 ENCODE Processing Pipeline 4e1838e1351db76436d24265809048c2 https://www.encodeproject.org/files/ENCFF385WQK/@@download/ENCFF385WQK.bigBed GRCh38 released low read depth, mild to moderate bottlenecking ENCFF442GMI bed narrowPeak peaks ENCSR991ELG ChIP-seq EFO:0002067 K562 cell line Homo sapiens SP1-human ENCAB000BAV DNA False 2014-07-07 ENCODE 2 ENCFF227IZS, ENCFF758LME 6682964 ENCODE Processing Pipeline 227aebf171c61609e000a54338069d5d https://www.encodeproject.org/files/ENCFF442GMI/@@download/ENCFF442GMI.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking ENCFF440HZQ bed narrowPeak conservative idr thresholded peaks ENCSR991ELG ChIP-seq EFO:0002067 K562 cell line Homo sapiens SP1-human ENCAB000BAV DNA False 2014-07-07 ENCODE 1, 2 ENCFF419RSJ, ENCFF442GMI, ENCFF482RLB, ENCFF621FNG 229367 ENCODE Processing Pipeline 88c1b7ca7f379fff5cdb27b438c4cf05 https://www.encodeproject.org/files/ENCFF440HZQ/@@download/ENCFF440HZQ.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking ENCFF452LDK bed narrowPeak optimal idr thresholded peaks ENCSR991ELG ChIP-seq EFO:0002067 K562 cell line Homo sapiens SP1-human ENCAB000BAV DNA False 2014-07-07 ENCODE 1, 2 ENCFF419RSJ, ENCFF442GMI, ENCFF482RLB, ENCFF621FNG 269540 ENCODE Processing Pipeline c9f1fe671a19405e9d00c16311861993 https://www.encodeproject.org/files/ENCFF452LDK/@@download/ENCFF452LDK.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking ENCFF482RLB bed narrowPeak peaks ENCSR991ELG ChIP-seq EFO:0002067 K562 cell line Homo sapiens SP1-human ENCAB000BAV DNA False 2014-07-07 ENCODE 1 ENCFF487SUP, ENCFF910IKB 6431546 ENCODE Processing Pipeline e71fb4987f4c809fd1ed0afd87f19fea https://www.encodeproject.org/files/ENCFF482RLB/@@download/ENCFF482RLB.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking ENCFF186BVP bigBed narrowPeak peaks ENCSR991ELG ChIP-seq EFO:0002067 K562 cell line Homo sapiens SP1-human ENCAB000BAV DNA False 2014-07-07 ENCODE 1 ENCFF482RLB 13389882 ENCODE Processing Pipeline f49ee1c9db96d30017e38b109f0c7e61 https://www.encodeproject.org/files/ENCFF186BVP/@@download/ENCFF186BVP.bigBed GRCh38 released low read depth, mild to moderate bottlenecking ENCFF621FNG bed narrowPeak peaks ENCSR991ELG ChIP-seq EFO:0002067 K562 cell line Homo sapiens SP1-human ENCAB000BAV DNA False 2014-07-07 ENCODE 1, 2 ENCFF227IZS, ENCFF487SUP, ENCFF758LME, ENCFF910IKB 7190972 ENCODE Processing Pipeline 74603f2eaa3a7de6d1b8dd547908efc4 https://www.encodeproject.org/files/ENCFF621FNG/@@download/ENCFF621FNG.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking ENCFF353BTM bigBed narrowPeak peaks ENCSR991ELG ChIP-seq EFO:0002067 K562 cell line Homo sapiens SP1-human ENCAB000BAV DNA False 2014-07-07 ENCODE 1, 2 ENCFF621FNG 13226572 ENCODE Processing Pipeline 235c8d3f49f458e52fb3ab66aeefcd7f https://www.encodeproject.org/files/ENCFF353BTM/@@download/ENCFF353BTM.bigBed GRCh38 released low read depth, mild to moderate bottlenecking ENCFF295FVL bigBed narrowPeak optimal idr thresholded peaks ENCSR991ELG ChIP-seq EFO:0002067 K562 cell line Homo sapiens SP1-human ENCAB000BAV DNA False 2014-07-07 ENCODE 1, 2 ENCFF452LDK 615391 ENCODE Processing Pipeline 819862f3abf953ea8d37a23d2eaff77b https://www.encodeproject.org/files/ENCFF295FVL/@@download/ENCFF295FVL.bigBed GRCh38 released low read depth, mild to moderate bottlenecking ENCFF919QMR bigBed narrowPeak conservative idr thresholded peaks ENCSR991ELG ChIP-seq EFO:0002067 K562 cell line Homo sapiens SP1-human ENCAB000BAV DNA False 2014-07-07 ENCODE 1, 2 ENCFF440HZQ 543278 ENCODE Processing Pipeline 1279c9a993e465f326ed1c71c46a16c9 https://www.encodeproject.org/files/ENCFF919QMR/@@download/ENCFF919QMR.bigBed GRCh38 released low read depth, mild to moderate bottlenecking ENCFF321TMN bed narrowPeak conservative idr thresholded peaks ENCSR991ELG ChIP-seq EFO:0002067 K562 cell line Homo sapiens SP1-human ENCAB000BAV DNA False 2014-07-07 ENCODE 1, 2 ENCFF001TDO, ENCFF422VXS, ENCFF459WKK, ENCFF699WES 193656 ENCODE Processing Pipeline 7a44b6ab7a431e0d5f11a87d001d19ef https://www.encodeproject.org/files/ENCFF321TMN/@@download/ENCFF321TMN.bed.gz hg19 archived low read depth, mild to moderate bottlenecking ENCFF134ZBV bigBed narrowPeak conservative idr thresholded peaks ENCSR991ELG ChIP-seq EFO:0002067 K562 cell line Homo sapiens SP1-human ENCAB000BAV DNA False 2014-07-07 ENCODE 1, 2 ENCFF321TMN 393610 ENCODE Processing Pipeline b396498fc0aac57b4103e31b7f9f9a16 https://www.encodeproject.org/files/ENCFF134ZBV/@@download/ENCFF134ZBV.bigBed hg19 archived low read depth, mild to moderate bottlenecking ENCFF058NMZ bed narrowPeak optimal idr thresholded peaks ENCSR991ELG ChIP-seq EFO:0002067 K562 cell line Homo sapiens SP1-human ENCAB000BAV DNA False 2014-07-07 ENCODE 1, 2 ENCFF001TDO, ENCFF422VXS, ENCFF459WKK, ENCFF699WES 223612 ENCODE Processing Pipeline 573eb94247a08300f7c022e4b16aeff5 https://www.encodeproject.org/files/ENCFF058NMZ/@@download/ENCFF058NMZ.bed.gz hg19 archived low read depth, mild to moderate bottlenecking ENCFF781JUI bigBed narrowPeak optimal idr thresholded peaks ENCSR991ELG ChIP-seq EFO:0002067 K562 cell line Homo sapiens SP1-human ENCAB000BAV DNA False 2014-07-07 ENCODE 1, 2 ENCFF058NMZ 434684 ENCODE Processing Pipeline e4680ba5c0d3813360bb476f0de7091f https://www.encodeproject.org/files/ENCFF781JUI/@@download/ENCFF781JUI.bigBed hg19 archived low read depth, mild to moderate bottlenecking ENCFF564UBH bigWig signal p-value ENCSR991ELG ChIP-seq EFO:0002067 K562 cell line Homo sapiens SP1-human ENCAB000BAV DNA False 2014-07-07 ENCODE 1, 2 ENCFF051LWI, ENCFF541UXW, ENCFF545HSY, ENCFF581ZJL 1943115191 ENCODE Processing Pipeline 2feed3b0b1d66d455a912b9b2afb43ec https://www.encodeproject.org/files/ENCFF564UBH/@@download/ENCFF564UBH.bigWig hg19 released low read depth, mild to moderate bottlenecking ENCFF591WIF bigWig fold change over control ENCSR991ELG ChIP-seq EFO:0002067 K562 cell line Homo sapiens SP1-human ENCAB000BAV DNA False 2014-07-07 ENCODE 1, 2 ENCFF051LWI, ENCFF541UXW, ENCFF545HSY, ENCFF581ZJL 2100194075 ENCODE Processing Pipeline 58ecb789ae7777b19e820456deadd78d https://www.encodeproject.org/files/ENCFF591WIF/@@download/ENCFF591WIF.bigWig hg19 released low read depth, mild to moderate bottlenecking ENCFF269OJD bed narrowPeak peaks ENCSR991ELG ChIP-seq EFO:0002067 K562 cell line Homo sapiens SP1-human ENCAB000BAV DNA False 2014-07-07 ENCODE 1 ENCFF545HSY, ENCFF581ZJL 6428918 ENCODE Processing Pipeline acb90b1069557278322f26bf973da922 https://www.encodeproject.org/files/ENCFF269OJD/@@download/ENCFF269OJD.bed.gz hg19 released low read depth, mild to moderate bottlenecking ENCFF343ROL bigBed narrowPeak conservative idr thresholded peaks ENCSR991ELG ChIP-seq EFO:0002067 K562 cell line Homo sapiens SP1-human ENCAB000BAV DNA False 2014-07-07 ENCODE 1, 2 ENCFF297KAT 535006 ENCODE Processing Pipeline 36f139481d353aea4b3a8f25764268e5 https://www.encodeproject.org/files/ENCFF343ROL/@@download/ENCFF343ROL.bigBed hg19 released low read depth, mild to moderate bottlenecking ENCFF778OYJ bed narrowPeak peaks ENCSR991ELG ChIP-seq EFO:0002067 K562 cell line Homo sapiens SP1-human ENCAB000BAV DNA False 2014-07-07 ENCODE 2 ENCFF051LWI, ENCFF541UXW 6686411 ENCODE Processing Pipeline 1cf0b24d5c55b03395a83d20ba7bab99 https://www.encodeproject.org/files/ENCFF778OYJ/@@download/ENCFF778OYJ.bed.gz hg19 released low read depth, mild to moderate bottlenecking ENCFF103ESU bed narrowPeak peaks ENCSR991ELG ChIP-seq EFO:0002067 K562 cell line Homo sapiens SP1-human ENCAB000BAV DNA False 2014-07-07 ENCODE 1, 2 ENCFF051LWI, ENCFF541UXW, ENCFF545HSY, ENCFF581ZJL 7172917 ENCODE Processing Pipeline 5c6dda9141a5d8ac25544ebeb1f7c987 https://www.encodeproject.org/files/ENCFF103ESU/@@download/ENCFF103ESU.bed.gz hg19 released low read depth, mild to moderate bottlenecking ENCFF493WDK bigBed narrowPeak peaks ENCSR991ELG ChIP-seq EFO:0002067 K562 cell line Homo sapiens SP1-human ENCAB000BAV DNA False 2014-07-07 ENCODE 1, 2 ENCFF103ESU 13197524 ENCODE Processing Pipeline b2947136d275a658bce83561baccf958 https://www.encodeproject.org/files/ENCFF493WDK/@@download/ENCFF493WDK.bigBed hg19 released low read depth, mild to moderate bottlenecking ENCFF300XUA bed narrowPeak optimal idr thresholded peaks ENCSR991ELG ChIP-seq EFO:0002067 K562 cell line Homo sapiens SP1-human ENCAB000BAV DNA False 2014-07-07 ENCODE 1, 2 ENCFF001TDO, ENCFF103ESU, ENCFF269OJD, ENCFF778OYJ 267916 ENCODE Processing Pipeline 375188392fd2e30179eec9249863ee49 https://www.encodeproject.org/files/ENCFF300XUA/@@download/ENCFF300XUA.bed.gz hg19 released low read depth, mild to moderate bottlenecking ENCFF988KHX bigBed narrowPeak peaks ENCSR991ELG ChIP-seq EFO:0002067 K562 cell line Homo sapiens SP1-human ENCAB000BAV DNA False 2014-07-07 ENCODE 1 ENCFF269OJD 13374255 ENCODE Processing Pipeline 178cd5f3e636222f2c6c423c46dfb407 https://www.encodeproject.org/files/ENCFF988KHX/@@download/ENCFF988KHX.bigBed hg19 released low read depth, mild to moderate bottlenecking ENCFF580JOU bigBed narrowPeak optimal idr thresholded peaks ENCSR991ELG ChIP-seq EFO:0002067 K562 cell line Homo sapiens SP1-human ENCAB000BAV DNA False 2014-07-07 ENCODE 1, 2 ENCFF300XUA 611563 ENCODE Processing Pipeline c6faebedf3c9b7aa3e7057433264d4de https://www.encodeproject.org/files/ENCFF580JOU/@@download/ENCFF580JOU.bigBed hg19 released low read depth, mild to moderate bottlenecking ENCFF305PIE bam unfiltered alignments ENCSR991ELG ChIP-seq EFO:0002067 K562 cell line Homo sapiens SP1-human ENCAB000BAV DNA False 2014-07-07 ENCODE 1 100 ENCFF002DPL, ENCFF002EGC, ENCFF807MUK 3321544446 ENCODE Processing Pipeline 338d67b643d662a12066470389c0c03b https://www.encodeproject.org/files/ENCFF305PIE/@@download/ENCFF305PIE.bam hg19 released low read depth, mild to moderate bottlenecking ENCFF594WZU bigBed narrowPeak peaks ENCSR991ELG ChIP-seq EFO:0002067 K562 cell line Homo sapiens SP1-human ENCAB000BAV DNA False 2014-07-07 ENCODE 2 ENCFF778OYJ 13205951 ENCODE Processing Pipeline c545d32f0e9526015150e093d0689e81 https://www.encodeproject.org/files/ENCFF594WZU/@@download/ENCFF594WZU.bigBed hg19 released low read depth, mild to moderate bottlenecking ENCFF297KAT bed narrowPeak conservative idr thresholded peaks ENCSR991ELG ChIP-seq EFO:0002067 K562 cell line Homo sapiens SP1-human ENCAB000BAV DNA False 2014-07-07 ENCODE 1, 2 ENCFF001TDO, ENCFF103ESU, ENCFF269OJD, ENCFF778OYJ 224798 ENCODE Processing Pipeline 4f9500769efa4145b72ab4340e26dbfc https://www.encodeproject.org/files/ENCFF297KAT/@@download/ENCFF297KAT.bed.gz hg19 released low read depth, mild to moderate bottlenecking ENCFF149UFV bam unfiltered alignments ENCSR991ELG ChIP-seq EFO:0002067 K562 cell line Homo sapiens SP1-human ENCAB000BAV DNA False 2014-07-07 ENCODE 2 100 ENCFF002DPP, ENCFF002EGO, ENCFF807MUK 6996644862 ENCODE Processing Pipeline ac758cea8e6bcdbcc02dab307bc84144 https://www.encodeproject.org/files/ENCFF149UFV/@@download/ENCFF149UFV.bam hg19 released low read depth, mild to moderate bottlenecking ENCFF000YJH bam alignments ENCSR000EFS ChIP-seq EFO:0002067 K562 cell line Homo sapiens JUN-human ENCAB000AER DNA see document see document False 2012-08-20 ENCODE 1 1 294370705 Michael Snyder, Stanford a3d58f4f07b8cdb69dafdbaff9cf1091 https://www.encodeproject.org/files/ENCFF000YJH/@@download/ENCFF000YJH.bam hg19 archived borderline replicate concordance, low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample, missing derived_from insufficient read depth missing control alignments ENCFF000YJI bigBed narrowPeak peaks ENCSR000EFS ChIP-seq EFO:0002067 K562 cell line Homo sapiens JUN-human ENCAB000AER DNA see document see document False 2012-08-20 ENCODE ENCFF001VMO 653997 Michael Snyder, Stanford db80ea6cbca9bee5ffc536b5e73d00ef https://www.encodeproject.org/files/ENCFF000YJI/@@download/ENCFF000YJI.bigBed hg19 archived borderline replicate concordance, low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample insufficient read depth missing control alignments ENCFF000YJJ fastq reads ENCSR000EFS ChIP-seq EFO:0002067 K562 cell line Homo sapiens JUN-human ENCAB000AER DNA see document see document False 2012-08-20 ENCODE 1 1 36 single-ended 527982670 Michael Snyder, Stanford 61e147d9835975ecee8864c9c1fbcc64 https://www.encodeproject.org/files/ENCFF000YJJ/@@download/ENCFF000YJJ.fastq.gz Illumina Genome Analyzer /files/ENCFF000YRB/ released borderline replicate concordance, low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample insufficient read depth missing control alignments ENCFF000YJL fastq reads ENCSR000EFS ChIP-seq EFO:0002067 K562 cell line Homo sapiens JUN-human ENCAB000AER DNA see document see document False 2012-08-20 ENCODE 2 1 36 single-ended 1010854208 Michael Snyder, Stanford 32d7cfc6544c4cc8019ed2924bbb310f https://www.encodeproject.org/files/ENCFF000YJL/@@download/ENCFF000YJL.fastq.gz Illumina Genome Analyzer /files/ENCFF000YRB/ released borderline replicate concordance, low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample insufficient read depth missing control alignments ENCFF000YJN bam alignments ENCSR000EFS ChIP-seq EFO:0002067 K562 cell line Homo sapiens JUN-human ENCAB000AER DNA see document see document False 2012-08-20 ENCODE 2 1 563176062 Michael Snyder, Stanford d9991d950657dbeb79d541c323f75753 https://www.encodeproject.org/files/ENCFF000YJN/@@download/ENCFF000YJN.bam hg19 archived borderline replicate concordance, low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample, missing derived_from insufficient read depth missing control alignments ENCFF000YJO bigWig signal ENCSR000EFS ChIP-seq EFO:0002067 K562 cell line Homo sapiens JUN-human ENCAB000AER DNA see document see document False 2012-08-20 ENCODE 438321992 Michael Snyder, Stanford 854deaa233936d192186cf5722f10587 https://www.encodeproject.org/files/ENCFF000YJO/@@download/ENCFF000YJO.bigWig hg19 archived borderline replicate concordance, low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample, missing derived_from insufficient read depth missing control alignments ENCFF001VMO bed narrowPeak peaks ENCSR000EFS ChIP-seq EFO:0002067 K562 cell line Homo sapiens JUN-human ENCAB000AER DNA see document see document False 2012-08-20 ENCODE 350531 Michael Snyder, Stanford e66b2414940814db9b3349c7870d8629 https://www.encodeproject.org/files/ENCFF001VMO/@@download/ENCFF001VMO.bed.gz hg19 archived borderline replicate concordance, low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample, missing derived_from insufficient read depth missing control alignments ENCFF156KMN bam unfiltered alignments ENCSR000EFS ChIP-seq EFO:0002067 K562 cell line Homo sapiens JUN-human ENCAB000AER DNA see document see document False 2012-08-20 ENCODE 1 36 ENCFF000YJJ, ENCFF643CGH 596459744 ENCODE Processing Pipeline fb18c23525dece2b814e935ab580f303 https://www.encodeproject.org/files/ENCFF156KMN/@@download/ENCFF156KMN.bam GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample insufficient read depth missing control alignments ENCFF924CYX bam alignments ENCSR000EFS ChIP-seq EFO:0002067 K562 cell line Homo sapiens JUN-human ENCAB000AER DNA see document see document False 2012-08-20 ENCODE 1 36 ENCFF000YJJ, ENCFF643CGH 383729217 ENCODE Processing Pipeline f6e958af6300874e8abd8a696b6601b2 https://www.encodeproject.org/files/ENCFF924CYX/@@download/ENCFF924CYX.bam GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample insufficient read depth missing control alignments ENCFF014UUB bam alignments ENCSR000EFS ChIP-seq EFO:0002067 K562 cell line Homo sapiens JUN-human ENCAB000AER DNA see document see document False 2012-08-20 ENCODE 2 36 ENCFF000YJL, ENCFF643CGH 764029946 ENCODE Processing Pipeline 40819714f4f7c7a674ca20ad47665494 https://www.encodeproject.org/files/ENCFF014UUB/@@download/ENCFF014UUB.bam GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample insufficient read depth missing control alignments ENCFF253URQ bam unfiltered alignments ENCSR000EFS ChIP-seq EFO:0002067 K562 cell line Homo sapiens JUN-human ENCAB000AER DNA see document see document False 2012-08-20 ENCODE 2 36 ENCFF000YJL, ENCFF643CGH 1146987348 ENCODE Processing Pipeline 71a62eda5f36978b47c26033b886d70a https://www.encodeproject.org/files/ENCFF253URQ/@@download/ENCFF253URQ.bam GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample insufficient read depth missing control alignments ENCFF328OFF bam unfiltered alignments ENCSR000EFS ChIP-seq EFO:0002067 K562 cell line Homo sapiens JUN-human ENCAB000AER DNA see document see document False 2012-08-20 ENCODE 1 36 ENCFF000YJJ, ENCFF807MUK 594328831 ENCODE Processing Pipeline 1997e71c2cfff43926be1db7d61196da https://www.encodeproject.org/files/ENCFF328OFF/@@download/ENCFF328OFF.bam hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample insufficient read depth missing control alignments ENCFF703KIU bam alignments ENCSR000EFS ChIP-seq EFO:0002067 K562 cell line Homo sapiens JUN-human ENCAB000AER DNA see document see document False 2012-08-20 ENCODE 1 36 ENCFF000YJJ, ENCFF807MUK 384094779 ENCODE Processing Pipeline 5546b500bf8a0b4c4f3b5d0096f3fca9 https://www.encodeproject.org/files/ENCFF703KIU/@@download/ENCFF703KIU.bam hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample insufficient read depth missing control alignments ENCFF235CXC bam unfiltered alignments ENCSR000EFS ChIP-seq EFO:0002067 K562 cell line Homo sapiens JUN-human ENCAB000AER DNA see document see document False 2012-08-20 ENCODE 2 36 ENCFF000YJL, ENCFF807MUK 1142441169 ENCODE Processing Pipeline ee3e0211a4d8d574d087f6f8ac869508 https://www.encodeproject.org/files/ENCFF235CXC/@@download/ENCFF235CXC.bam hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample insufficient read depth missing control alignments ENCFF738IAS bam alignments ENCSR000EFS ChIP-seq EFO:0002067 K562 cell line Homo sapiens JUN-human ENCAB000AER DNA see document see document False 2012-08-20 ENCODE 2 36 ENCFF000YJL, ENCFF807MUK 764612357 ENCODE Processing Pipeline b78153f4ba56ddec01f6e07ea21e5127 https://www.encodeproject.org/files/ENCFF738IAS/@@download/ENCFF738IAS.bam hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample insufficient read depth missing control alignments ENCFF243LNJ bigWig signal p-value ENCSR000EFS ChIP-seq EFO:0002067 K562 cell line Homo sapiens JUN-human ENCAB000AER DNA see document see document False 2012-08-20 ENCODE 1, 2 ENCFF014UUB, ENCFF924CYX 546315148 ENCODE Processing Pipeline 9e35b07e9f115e1c3bcb6586a748bfeb https://www.encodeproject.org/files/ENCFF243LNJ/@@download/ENCFF243LNJ.bigWig GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample insufficient read depth missing control alignments ENCFF242EWA bigWig signal p-value ENCSR000EFS ChIP-seq EFO:0002067 K562 cell line Homo sapiens JUN-human ENCAB000AER DNA see document see document False 2012-08-20 ENCODE 1 ENCFF924CYX 460446198 ENCODE Processing Pipeline 44c76e8016795d141edbc9dce696ec4e https://www.encodeproject.org/files/ENCFF242EWA/@@download/ENCFF242EWA.bigWig GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample insufficient read depth missing control alignments ENCFF812WJT bigWig signal p-value ENCSR000EFS ChIP-seq EFO:0002067 K562 cell line Homo sapiens JUN-human ENCAB000AER DNA see document see document False 2012-08-20 ENCODE 2 ENCFF014UUB 551439365 ENCODE Processing Pipeline 81e937553d1043d81c6f11f2afb89071 https://www.encodeproject.org/files/ENCFF812WJT/@@download/ENCFF812WJT.bigWig GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample insufficient read depth missing control alignments ENCFF957HFI bigWig fold change over control ENCSR000EFS ChIP-seq EFO:0002067 K562 cell line Homo sapiens JUN-human ENCAB000AER DNA see document see document False 2012-08-20 ENCODE 1 ENCFF924CYX 231607048 ENCODE Processing Pipeline e0517678eab7976b76ed1341ab8de714 https://www.encodeproject.org/files/ENCFF957HFI/@@download/ENCFF957HFI.bigWig GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample insufficient read depth missing control alignments ENCFF361SMB bigWig fold change over control ENCSR000EFS ChIP-seq EFO:0002067 K562 cell line Homo sapiens JUN-human ENCAB000AER DNA see document see document False 2012-08-20 ENCODE 2 ENCFF014UUB 397983436 ENCODE Processing Pipeline 5b7ecb6cbbc5215f0722f298609c6528 https://www.encodeproject.org/files/ENCFF361SMB/@@download/ENCFF361SMB.bigWig GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample insufficient read depth missing control alignments ENCFF345MES bigWig fold change over control ENCSR000EFS ChIP-seq EFO:0002067 K562 cell line Homo sapiens JUN-human ENCAB000AER DNA see document see document False 2012-08-20 ENCODE 1, 2 ENCFF014UUB, ENCFF924CYX 540365814 ENCODE Processing Pipeline e7ce1569d881fa656fe1f0f75dd6e130 https://www.encodeproject.org/files/ENCFF345MES/@@download/ENCFF345MES.bigWig GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample insufficient read depth missing control alignments ENCFF893YYD bed narrowPeak peaks ENCSR000EFS ChIP-seq EFO:0002067 K562 cell line Homo sapiens JUN-human ENCAB000AER DNA see document see document False 2012-08-20 ENCODE 2 ENCFF014UUB 5228944 ENCODE Processing Pipeline 95259a286a0a8358008c223187239071 https://www.encodeproject.org/files/ENCFF893YYD/@@download/ENCFF893YYD.bed.gz GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample insufficient read depth missing control alignments ENCFF283XPJ bed narrowPeak peaks ENCSR000EFS ChIP-seq EFO:0002067 K562 cell line Homo sapiens JUN-human ENCAB000AER DNA see document see document False 2012-08-20 ENCODE 1, 2 ENCFF014UUB, ENCFF924CYX 5555132 ENCODE Processing Pipeline 719c93766b8b27b1d92f3a5466fad215 https://www.encodeproject.org/files/ENCFF283XPJ/@@download/ENCFF283XPJ.bed.gz GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample insufficient read depth missing control alignments ENCFF543MHK bed narrowPeak peaks ENCSR000EFS ChIP-seq EFO:0002067 K562 cell line Homo sapiens JUN-human ENCAB000AER DNA see document see document False 2012-08-20 ENCODE 1 ENCFF924CYX 4246322 ENCODE Processing Pipeline 7ee72642b31d088f8dcf6eddce06bd86 https://www.encodeproject.org/files/ENCFF543MHK/@@download/ENCFF543MHK.bed.gz GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample insufficient read depth missing control alignments ENCFF804LZH bigBed narrowPeak peaks ENCSR000EFS ChIP-seq EFO:0002067 K562 cell line Homo sapiens JUN-human ENCAB000AER DNA see document see document False 2012-08-20 ENCODE 1 ENCFF543MHK 10183411 ENCODE Processing Pipeline 55b1aa6b57afedde0f1102627a577488 https://www.encodeproject.org/files/ENCFF804LZH/@@download/ENCFF804LZH.bigBed GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample insufficient read depth missing control alignments ENCFF688WGA bigBed narrowPeak peaks ENCSR000EFS ChIP-seq EFO:0002067 K562 cell line Homo sapiens JUN-human ENCAB000AER DNA see document see document False 2012-08-20 ENCODE 1, 2 ENCFF283XPJ 13273155 ENCODE Processing Pipeline 5c7669e5abec5f02473f27b0671b1bc5 https://www.encodeproject.org/files/ENCFF688WGA/@@download/ENCFF688WGA.bigBed GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample insufficient read depth missing control alignments ENCFF905NMP bed narrowPeak conservative idr thresholded peaks ENCSR000EFS ChIP-seq EFO:0002067 K562 cell line Homo sapiens JUN-human ENCAB000AER DNA see document see document False 2012-08-20 ENCODE 1, 2 ENCFF283XPJ, ENCFF419RSJ, ENCFF543MHK, ENCFF893YYD 323656 ENCODE Processing Pipeline 7f529c720d838d577a0be11df6b0d4b0 https://www.encodeproject.org/files/ENCFF905NMP/@@download/ENCFF905NMP.bed.gz GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample insufficient read depth missing control alignments ENCFF478EFX bigBed narrowPeak conservative idr thresholded peaks ENCSR000EFS ChIP-seq EFO:0002067 K562 cell line Homo sapiens JUN-human ENCAB000AER DNA see document see document False 2012-08-20 ENCODE 1, 2 ENCFF905NMP 587389 ENCODE Processing Pipeline 8f2050aba35754d8dea3f6a10e12cb16 https://www.encodeproject.org/files/ENCFF478EFX/@@download/ENCFF478EFX.bigBed GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample insufficient read depth missing control alignments ENCFF976GWT bigBed narrowPeak peaks ENCSR000EFS ChIP-seq EFO:0002067 K562 cell line Homo sapiens JUN-human ENCAB000AER DNA see document see document False 2012-08-20 ENCODE 2 ENCFF893YYD 11000573 ENCODE Processing Pipeline 872499155b487985aee15d903c9fd6a5 https://www.encodeproject.org/files/ENCFF976GWT/@@download/ENCFF976GWT.bigBed GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample insufficient read depth missing control alignments ENCFF394CEC bed narrowPeak optimal idr thresholded peaks ENCSR000EFS ChIP-seq EFO:0002067 K562 cell line Homo sapiens JUN-human ENCAB000AER DNA see document see document False 2012-08-20 ENCODE 1, 2 ENCFF283XPJ, ENCFF419RSJ, ENCFF543MHK, ENCFF893YYD 386163 ENCODE Processing Pipeline a4d1eaceaadf0a4371abbf9afa089c69 https://www.encodeproject.org/files/ENCFF394CEC/@@download/ENCFF394CEC.bed.gz GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample insufficient read depth missing control alignments ENCFF866AII bigBed narrowPeak optimal idr thresholded peaks ENCSR000EFS ChIP-seq EFO:0002067 K562 cell line Homo sapiens JUN-human ENCAB000AER DNA see document see document False 2012-08-20 ENCODE 1, 2 ENCFF394CEC 671056 ENCODE Processing Pipeline 4eb4c3ec5522cfa9e63f8c1a6082fcef https://www.encodeproject.org/files/ENCFF866AII/@@download/ENCFF866AII.bigBed GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample insufficient read depth missing control alignments ENCFF106VGF bigWig fold change over control ENCSR000EFS ChIP-seq EFO:0002067 K562 cell line Homo sapiens JUN-human ENCAB000AER DNA see document see document False 2012-08-20 ENCODE 2 ENCFF710NTS, ENCFF738IAS 398942051 ENCODE Processing Pipeline 9250d5ba14e55b490849b5b1a707f3a9 https://www.encodeproject.org/files/ENCFF106VGF/@@download/ENCFF106VGF.bigWig hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample insufficient read depth missing control alignments ENCFF400UDO bigBed narrowPeak optimal idr thresholded peaks ENCSR000EFS ChIP-seq EFO:0002067 K562 cell line Homo sapiens JUN-human ENCAB000AER DNA see document see document False 2012-08-20 ENCODE 1, 2 ENCFF629BFI 674632 ENCODE Processing Pipeline 1195e405e0202df90b8f1762d792dce7 https://www.encodeproject.org/files/ENCFF400UDO/@@download/ENCFF400UDO.bigBed hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample insufficient read depth missing control alignments ENCFF476UKJ bigWig signal p-value ENCSR000EFS ChIP-seq EFO:0002067 K562 cell line Homo sapiens JUN-human ENCAB000AER DNA see document see document False 2012-08-20 ENCODE 1 ENCFF703KIU, ENCFF710NTS 346048934 ENCODE Processing Pipeline 29c5c958296a3bd8d5fb337ffd1eadee https://www.encodeproject.org/files/ENCFF476UKJ/@@download/ENCFF476UKJ.bigWig hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample insufficient read depth missing control alignments ENCFF722NGA bigWig fold change over control ENCSR000EFS ChIP-seq EFO:0002067 K562 cell line Homo sapiens JUN-human ENCAB000AER DNA see document see document False 2012-08-20 ENCODE 1 ENCFF703KIU, ENCFF710NTS 227811759 ENCODE Processing Pipeline db6fa4be8984deb0faa9b3f6edc16101 https://www.encodeproject.org/files/ENCFF722NGA/@@download/ENCFF722NGA.bigWig hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample insufficient read depth missing control alignments ENCFF422SBX bed narrowPeak peaks ENCSR000EFS ChIP-seq EFO:0002067 K562 cell line Homo sapiens JUN-human ENCAB000AER DNA see document see document False 2012-08-20 ENCODE 1, 2 ENCFF703KIU, ENCFF710NTS, ENCFF738IAS 5558042 ENCODE Processing Pipeline 49411d81e4a5c39155fc0169c59744dc https://www.encodeproject.org/files/ENCFF422SBX/@@download/ENCFF422SBX.bed.gz hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample insufficient read depth missing control alignments ENCFF088VCF bigBed narrowPeak conservative idr thresholded peaks ENCSR000EFS ChIP-seq EFO:0002067 K562 cell line Homo sapiens JUN-human ENCAB000AER DNA see document see document False 2012-08-20 ENCODE 1, 2 ENCFF934OCU 586842 ENCODE Processing Pipeline 015732860ba9f3943011a380dd55cc8d https://www.encodeproject.org/files/ENCFF088VCF/@@download/ENCFF088VCF.bigBed hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample insufficient read depth missing control alignments ENCFF019RFT bigWig signal p-value ENCSR000EFS ChIP-seq EFO:0002067 K562 cell line Homo sapiens JUN-human ENCAB000AER DNA see document see document False 2012-08-20 ENCODE 2 ENCFF710NTS, ENCFF738IAS 493381811 ENCODE Processing Pipeline 5e95bb5979ec24360192f6688e054c0b https://www.encodeproject.org/files/ENCFF019RFT/@@download/ENCFF019RFT.bigWig hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample insufficient read depth missing control alignments ENCFF780KHA bigWig fold change over control ENCSR000EFS ChIP-seq EFO:0002067 K562 cell line Homo sapiens JUN-human ENCAB000AER DNA see document see document False 2012-08-20 ENCODE 1, 2 ENCFF703KIU, ENCFF710NTS, ENCFF738IAS 543914751 ENCODE Processing Pipeline 3bb358da28c1e878f1bc1c3e71212a45 https://www.encodeproject.org/files/ENCFF780KHA/@@download/ENCFF780KHA.bigWig hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample insufficient read depth missing control alignments ENCFF596KVH bed narrowPeak peaks ENCSR000EFS ChIP-seq EFO:0002067 K562 cell line Homo sapiens JUN-human ENCAB000AER DNA see document see document False 2012-08-20 ENCODE 1 ENCFF703KIU, ENCFF710NTS 4250099 ENCODE Processing Pipeline 25bcfe841e4379e12213ec46fd0af751 https://www.encodeproject.org/files/ENCFF596KVH/@@download/ENCFF596KVH.bed.gz hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample insufficient read depth missing control alignments ENCFF182AWR bed narrowPeak peaks ENCSR000EFS ChIP-seq EFO:0002067 K562 cell line Homo sapiens JUN-human ENCAB000AER DNA see document see document False 2012-08-20 ENCODE 2 ENCFF710NTS, ENCFF738IAS 5260689 ENCODE Processing Pipeline 0d7bb4ba36aaaddc656d121e2b42a299 https://www.encodeproject.org/files/ENCFF182AWR/@@download/ENCFF182AWR.bed.gz hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample insufficient read depth missing control alignments ENCFF678MJZ bigBed narrowPeak peaks ENCSR000EFS ChIP-seq EFO:0002067 K562 cell line Homo sapiens JUN-human ENCAB000AER DNA see document see document False 2012-08-20 ENCODE 1 ENCFF596KVH 10185630 ENCODE Processing Pipeline e90d1e08dab4bc4b2f294df5648871f2 https://www.encodeproject.org/files/ENCFF678MJZ/@@download/ENCFF678MJZ.bigBed hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample insufficient read depth missing control alignments ENCFF554TLT bigBed narrowPeak peaks ENCSR000EFS ChIP-seq EFO:0002067 K562 cell line Homo sapiens JUN-human ENCAB000AER DNA see document see document False 2012-08-20 ENCODE 2 ENCFF182AWR 10989998 ENCODE Processing Pipeline b6740525c65611aedfd57114209ab5db https://www.encodeproject.org/files/ENCFF554TLT/@@download/ENCFF554TLT.bigBed hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample insufficient read depth missing control alignments ENCFF692BOZ bigWig signal p-value ENCSR000EFS ChIP-seq EFO:0002067 K562 cell line Homo sapiens JUN-human ENCAB000AER DNA see document see document False 2012-08-20 ENCODE 1, 2 ENCFF703KIU, ENCFF710NTS, ENCFF738IAS 577667216 ENCODE Processing Pipeline ff20ff8130fdbbf85b3992f90f68c783 https://www.encodeproject.org/files/ENCFF692BOZ/@@download/ENCFF692BOZ.bigWig hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample insufficient read depth missing control alignments ENCFF946YTQ bigBed narrowPeak peaks ENCSR000EFS ChIP-seq EFO:0002067 K562 cell line Homo sapiens JUN-human ENCAB000AER DNA see document see document False 2012-08-20 ENCODE 1, 2 ENCFF422SBX 13268352 ENCODE Processing Pipeline dae5202f899eb014a431eec60ec62460 https://www.encodeproject.org/files/ENCFF946YTQ/@@download/ENCFF946YTQ.bigBed hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample insufficient read depth missing control alignments ENCFF934OCU bed narrowPeak conservative idr thresholded peaks ENCSR000EFS ChIP-seq EFO:0002067 K562 cell line Homo sapiens JUN-human ENCAB000AER DNA see document see document False 2012-08-20 ENCODE 1, 2 ENCFF001TDO, ENCFF182AWR, ENCFF422SBX, ENCFF596KVH 323642 ENCODE Processing Pipeline 733c5bf2090a74744daa6518bba115a5 https://www.encodeproject.org/files/ENCFF934OCU/@@download/ENCFF934OCU.bed.gz hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample insufficient read depth missing control alignments ENCFF629BFI bed narrowPeak optimal idr thresholded peaks ENCSR000EFS ChIP-seq EFO:0002067 K562 cell line Homo sapiens JUN-human ENCAB000AER DNA see document see document False 2012-08-20 ENCODE 1, 2 ENCFF001TDO, ENCFF182AWR, ENCFF422SBX, ENCFF596KVH 388538 ENCODE Processing Pipeline 5ebab0cfbc3b0ee3b78931c4d1edd480 https://www.encodeproject.org/files/ENCFF629BFI/@@download/ENCFF629BFI.bed.gz hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample insufficient read depth missing control alignments ENCFF994KPK fastq reads ENCSR641BSL ChIP-seq EFO:0002067 K562 cell line Homo sapiens AGO1-human ENCAB189GDE DNA SDS formaldehyde False 2017-02-27 ENCODE 1 1 40 single-ended 959469033 Xiang-Dong Fu, UCSD 3d45d674044bdfa5439c20daf160fac5 SRA:SRR6213546 https://www.encodeproject.org/files/ENCFF994KPK/@@download/ENCFF994KPK.fastq.gz Illumina HiSeq 2500 /files/ENCFF510UAH/ released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity missing control alignments ENCFF836CBD fastq reads ENCSR641BSL ChIP-seq EFO:0002067 K562 cell line Homo sapiens AGO1-human ENCAB189GDE DNA SDS formaldehyde False 2017-02-27 ENCODE 2 1 40 single-ended 923321750 Xiang-Dong Fu, UCSD 943f117be3e2b776e6e03e98e0fc7eaa SRA:SRR6213547 https://www.encodeproject.org/files/ENCFF836CBD/@@download/ENCFF836CBD.fastq.gz Illumina HiSeq 2500 /files/ENCFF092DDZ/ released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity missing control alignments ENCFF471TDC bam alignments ENCSR641BSL ChIP-seq EFO:0002067 K562 cell line Homo sapiens AGO1-human ENCAB189GDE DNA SDS formaldehyde False 2017-02-27 ENCODE 2 40 ENCFF643CGH, ENCFF836CBD 469746382 ENCODE Processing Pipeline a221a4ee6899ee5a6eb568bc999c5c5e https://www.encodeproject.org/files/ENCFF471TDC/@@download/ENCFF471TDC.bam GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity missing control alignments ENCFF188QXQ bam unfiltered alignments ENCSR641BSL ChIP-seq EFO:0002067 K562 cell line Homo sapiens AGO1-human ENCAB189GDE DNA SDS formaldehyde False 2017-02-27 ENCODE 2 40 ENCFF643CGH, ENCFF836CBD 1126917716 ENCODE Processing Pipeline 3f1d44f733ae14e3ac1cd66865ac3f6f https://www.encodeproject.org/files/ENCFF188QXQ/@@download/ENCFF188QXQ.bam GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity missing control alignments ENCFF502HMU bam unfiltered alignments ENCSR641BSL ChIP-seq EFO:0002067 K562 cell line Homo sapiens AGO1-human ENCAB189GDE DNA SDS formaldehyde False 2017-02-27 ENCODE 1 40 ENCFF643CGH, ENCFF994KPK 1184733176 ENCODE Processing Pipeline 949b6c515f66cb1fa057465173857fe5 https://www.encodeproject.org/files/ENCFF502HMU/@@download/ENCFF502HMU.bam GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity missing control alignments ENCFF490RQI bam unfiltered alignments ENCSR641BSL ChIP-seq EFO:0002067 K562 cell line Homo sapiens AGO1-human ENCAB189GDE DNA SDS formaldehyde False 2017-02-27 ENCODE 1 40 ENCFF807MUK, ENCFF994KPK 1180466293 ENCODE Processing Pipeline 67946f16968af9145eb26e6bad9f29d6 https://www.encodeproject.org/files/ENCFF490RQI/@@download/ENCFF490RQI.bam hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity missing control alignments ENCFF648AFL bam alignments ENCSR641BSL ChIP-seq EFO:0002067 K562 cell line Homo sapiens AGO1-human ENCAB189GDE DNA SDS formaldehyde False 2017-02-27 ENCODE 1 40 ENCFF807MUK, ENCFF994KPK 539999169 ENCODE Processing Pipeline 9fc2aa84c1cff25d2d47ffd21a223fa3 https://www.encodeproject.org/files/ENCFF648AFL/@@download/ENCFF648AFL.bam hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity missing control alignments ENCFF360QAB bam alignments ENCSR641BSL ChIP-seq EFO:0002067 K562 cell line Homo sapiens AGO1-human ENCAB189GDE DNA SDS formaldehyde False 2017-02-27 ENCODE 1 40 ENCFF643CGH, ENCFF994KPK 539301646 ENCODE Processing Pipeline 911e214e9d930a83a0f70ad2086916ec https://www.encodeproject.org/files/ENCFF360QAB/@@download/ENCFF360QAB.bam GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity missing control alignments ENCFF431XVO bam alignments ENCSR641BSL ChIP-seq EFO:0002067 K562 cell line Homo sapiens AGO1-human ENCAB189GDE DNA SDS formaldehyde False 2017-02-27 ENCODE 2 40 ENCFF807MUK, ENCFF836CBD 470352558 ENCODE Processing Pipeline dbf52045fe1f074f73d9f1580ee04bae https://www.encodeproject.org/files/ENCFF431XVO/@@download/ENCFF431XVO.bam hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity missing control alignments ENCFF889EEB bam unfiltered alignments ENCSR641BSL ChIP-seq EFO:0002067 K562 cell line Homo sapiens AGO1-human ENCAB189GDE DNA SDS formaldehyde False 2017-02-27 ENCODE 2 40 ENCFF807MUK, ENCFF836CBD 1122593363 ENCODE Processing Pipeline 8729b269d89c159d37a9e6f4095ca295 https://www.encodeproject.org/files/ENCFF889EEB/@@download/ENCFF889EEB.bam hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity missing control alignments ENCFF775IVB bigWig signal p-value ENCSR641BSL ChIP-seq EFO:0002067 K562 cell line Homo sapiens AGO1-human ENCAB189GDE DNA SDS formaldehyde False 2017-02-27 ENCODE 2 ENCFF431XVO, ENCFF572OMD 413113370 ENCODE Processing Pipeline 97c736ccc50958583ca645dfa57de92a https://www.encodeproject.org/files/ENCFF775IVB/@@download/ENCFF775IVB.bigWig hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity missing control alignments ENCFF197LLD bigWig signal p-value ENCSR641BSL ChIP-seq EFO:0002067 K562 cell line Homo sapiens AGO1-human ENCAB189GDE DNA SDS formaldehyde False 2017-02-27 ENCODE 1 ENCFF508DBG, ENCFF648AFL 472052246 ENCODE Processing Pipeline 072fe84a7e78b7040cb19b1b373f406a https://www.encodeproject.org/files/ENCFF197LLD/@@download/ENCFF197LLD.bigWig hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity missing control alignments ENCFF115WOM bigWig signal p-value ENCSR641BSL ChIP-seq EFO:0002067 K562 cell line Homo sapiens AGO1-human ENCAB189GDE DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF431XVO, ENCFF508DBG, ENCFF572OMD, ENCFF648AFL 831230770 ENCODE Processing Pipeline 806a1ddd09a186a89c19b062d633c145 https://www.encodeproject.org/files/ENCFF115WOM/@@download/ENCFF115WOM.bigWig hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity missing control alignments ENCFF195LIB bigWig fold change over control ENCSR641BSL ChIP-seq EFO:0002067 K562 cell line Homo sapiens AGO1-human ENCAB189GDE DNA SDS formaldehyde False 2017-02-27 ENCODE 1 ENCFF508DBG, ENCFF648AFL 362924860 ENCODE Processing Pipeline 70f53f2c50747519fb90b3f143165ab8 https://www.encodeproject.org/files/ENCFF195LIB/@@download/ENCFF195LIB.bigWig hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity missing control alignments ENCFF739PXE bigWig fold change over control ENCSR641BSL ChIP-seq EFO:0002067 K562 cell line Homo sapiens AGO1-human ENCAB189GDE DNA SDS formaldehyde False 2017-02-27 ENCODE 2 ENCFF431XVO, ENCFF572OMD 297736955 ENCODE Processing Pipeline 70d852c7f6abd981550883f4b28d672e https://www.encodeproject.org/files/ENCFF739PXE/@@download/ENCFF739PXE.bigWig hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity missing control alignments ENCFF054VBS bigWig fold change over control ENCSR641BSL ChIP-seq EFO:0002067 K562 cell line Homo sapiens AGO1-human ENCAB189GDE DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF431XVO, ENCFF508DBG, ENCFF572OMD, ENCFF648AFL 723274368 ENCODE Processing Pipeline f10632f7fd6c251cecd0a9a3779c3755 https://www.encodeproject.org/files/ENCFF054VBS/@@download/ENCFF054VBS.bigWig hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity missing control alignments ENCFF980ENB bed narrowPeak peaks ENCSR641BSL ChIP-seq EFO:0002067 K562 cell line Homo sapiens AGO1-human ENCAB189GDE DNA SDS formaldehyde False 2017-02-27 ENCODE 2 ENCFF431XVO, ENCFF572OMD 5998545 ENCODE Processing Pipeline a861b9c84c22d404d0e45ef934e017d2 https://www.encodeproject.org/files/ENCFF980ENB/@@download/ENCFF980ENB.bed.gz hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity missing control alignments ENCFF023SZR bigBed narrowPeak peaks ENCSR641BSL ChIP-seq EFO:0002067 K562 cell line Homo sapiens AGO1-human ENCAB189GDE DNA SDS formaldehyde False 2017-02-27 ENCODE 1 ENCFF191KLS 12958457 ENCODE Processing Pipeline 140a72180847f5d1f68fa25723dbcadc https://www.encodeproject.org/files/ENCFF023SZR/@@download/ENCFF023SZR.bigBed hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity missing control alignments ENCFF939GVX bigBed narrowPeak peaks ENCSR641BSL ChIP-seq EFO:0002067 K562 cell line Homo sapiens AGO1-human ENCAB189GDE DNA SDS formaldehyde False 2017-02-27 ENCODE 2 ENCFF980ENB 12927732 ENCODE Processing Pipeline f9605f2a4982d07847b1e2c14b8e6ac5 https://www.encodeproject.org/files/ENCFF939GVX/@@download/ENCFF939GVX.bigBed hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity missing control alignments ENCFF191KLS bed narrowPeak peaks ENCSR641BSL ChIP-seq EFO:0002067 K562 cell line Homo sapiens AGO1-human ENCAB189GDE DNA SDS formaldehyde False 2017-02-27 ENCODE 1 ENCFF508DBG, ENCFF648AFL 6220137 ENCODE Processing Pipeline 83bc0b2fc5f626e6c45d14ff150c1ac7 https://www.encodeproject.org/files/ENCFF191KLS/@@download/ENCFF191KLS.bed.gz hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity missing control alignments ENCFF790CEE bed narrowPeak peaks ENCSR641BSL ChIP-seq EFO:0002067 K562 cell line Homo sapiens AGO1-human ENCAB189GDE DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF431XVO, ENCFF508DBG, ENCFF572OMD, ENCFF648AFL 7175237 ENCODE Processing Pipeline cabbccd88785f8ad1a8113c22ac7bb49 https://www.encodeproject.org/files/ENCFF790CEE/@@download/ENCFF790CEE.bed.gz hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity missing control alignments ENCFF107MPX bigBed narrowPeak peaks ENCSR641BSL ChIP-seq EFO:0002067 K562 cell line Homo sapiens AGO1-human ENCAB189GDE DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF790CEE 12936979 ENCODE Processing Pipeline 8d31e5d80d20dffc4565644f39acecf9 https://www.encodeproject.org/files/ENCFF107MPX/@@download/ENCFF107MPX.bigBed hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity missing control alignments ENCFF242XOG bigBed narrowPeak conservative idr thresholded peaks ENCSR641BSL ChIP-seq EFO:0002067 K562 cell line Homo sapiens AGO1-human ENCAB189GDE DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF556KWA 528534 ENCODE Processing Pipeline a04c5e9d2a267c949581d4079ecf7319 https://www.encodeproject.org/files/ENCFF242XOG/@@download/ENCFF242XOG.bigBed hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity missing control alignments ENCFF556KWA bed narrowPeak conservative idr thresholded peaks ENCSR641BSL ChIP-seq EFO:0002067 K562 cell line Homo sapiens AGO1-human ENCAB189GDE DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF001TDO, ENCFF191KLS, ENCFF790CEE, ENCFF980ENB 199829 ENCODE Processing Pipeline 5943d47018181e2692efa861635e81a1 https://www.encodeproject.org/files/ENCFF556KWA/@@download/ENCFF556KWA.bed.gz hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity missing control alignments ENCFF836VRV bed narrowPeak optimal idr thresholded peaks ENCSR641BSL ChIP-seq EFO:0002067 K562 cell line Homo sapiens AGO1-human ENCAB189GDE DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF001TDO, ENCFF191KLS, ENCFF790CEE, ENCFF980ENB 213412 ENCODE Processing Pipeline ed6161b402cc3a65c4fcd72b0bcd501a https://www.encodeproject.org/files/ENCFF836VRV/@@download/ENCFF836VRV.bed.gz hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity missing control alignments ENCFF601MYL bigBed narrowPeak optimal idr thresholded peaks ENCSR641BSL ChIP-seq EFO:0002067 K562 cell line Homo sapiens AGO1-human ENCAB189GDE DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF836VRV 557929 ENCODE Processing Pipeline 5d3d166c07759ee8b7a2886a33ea3ce4 https://www.encodeproject.org/files/ENCFF601MYL/@@download/ENCFF601MYL.bigBed hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity missing control alignments ENCFF308CCV bigWig signal p-value ENCSR641BSL ChIP-seq EFO:0002067 K562 cell line Homo sapiens AGO1-human ENCAB189GDE DNA SDS formaldehyde False 2017-02-27 ENCODE 1 ENCFF360QAB 585571389 ENCODE Processing Pipeline d7fe9d33c2db3391f16895355d911fc7 https://www.encodeproject.org/files/ENCFF308CCV/@@download/ENCFF308CCV.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity missing control alignments ENCFF717NDQ bed narrowPeak peaks ENCSR641BSL ChIP-seq EFO:0002067 K562 cell line Homo sapiens AGO1-human ENCAB189GDE DNA SDS formaldehyde False 2017-02-27 ENCODE 1 ENCFF360QAB 6202996 ENCODE Processing Pipeline 752a2a067a1a9191ee98b5ebc49d4b5c https://www.encodeproject.org/files/ENCFF717NDQ/@@download/ENCFF717NDQ.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity missing control alignments ENCFF741BCI bigBed narrowPeak optimal idr thresholded peaks ENCSR641BSL ChIP-seq EFO:0002067 K562 cell line Homo sapiens AGO1-human ENCAB189GDE DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF100VYA 556981 ENCODE Processing Pipeline c8dd07dc23ce93d4725354b8979c1f9b https://www.encodeproject.org/files/ENCFF741BCI/@@download/ENCFF741BCI.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity missing control alignments ENCFF117VZX bigWig signal p-value ENCSR641BSL ChIP-seq EFO:0002067 K562 cell line Homo sapiens AGO1-human ENCAB189GDE DNA SDS formaldehyde False 2017-02-27 ENCODE 2 ENCFF471TDC 455829234 ENCODE Processing Pipeline 175bcecba1d7f63fc3ac52acbd31195d https://www.encodeproject.org/files/ENCFF117VZX/@@download/ENCFF117VZX.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity missing control alignments ENCFF057BCB bigWig fold change over control ENCSR641BSL ChIP-seq EFO:0002067 K562 cell line Homo sapiens AGO1-human ENCAB189GDE DNA SDS formaldehyde False 2017-02-27 ENCODE 2 ENCFF471TDC 291116783 ENCODE Processing Pipeline bba539657fa3c9866167f7fe1909eaf2 https://www.encodeproject.org/files/ENCFF057BCB/@@download/ENCFF057BCB.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity missing control alignments ENCFF124PJH bigBed narrowPeak peaks ENCSR641BSL ChIP-seq EFO:0002067 K562 cell line Homo sapiens AGO1-human ENCAB189GDE DNA SDS formaldehyde False 2017-02-27 ENCODE 2 ENCFF577CIY 12917674 ENCODE Processing Pipeline 404f83d9d589c42db0aed01b497b1318 https://www.encodeproject.org/files/ENCFF124PJH/@@download/ENCFF124PJH.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity missing control alignments ENCFF927SOS bed narrowPeak conservative idr thresholded peaks ENCSR641BSL ChIP-seq EFO:0002067 K562 cell line Homo sapiens AGO1-human ENCAB189GDE DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF110JOA, ENCFF419RSJ, ENCFF577CIY, ENCFF717NDQ 189895 ENCODE Processing Pipeline 6af1bf0c1cc7cf347f2cfbea481c3f81 https://www.encodeproject.org/files/ENCFF927SOS/@@download/ENCFF927SOS.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity missing control alignments ENCFF893JPR bigBed narrowPeak peaks ENCSR641BSL ChIP-seq EFO:0002067 K562 cell line Homo sapiens AGO1-human ENCAB189GDE DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF110JOA 12919576 ENCODE Processing Pipeline 72241f0eca34235c32fe3474910e7948 https://www.encodeproject.org/files/ENCFF893JPR/@@download/ENCFF893JPR.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity missing control alignments ENCFF968KYK bigWig signal p-value ENCSR641BSL ChIP-seq EFO:0002067 K562 cell line Homo sapiens AGO1-human ENCAB189GDE DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF360QAB, ENCFF471TDC 851439905 ENCODE Processing Pipeline ecf446d629981c4c75cbd903c75a5b97 https://www.encodeproject.org/files/ENCFF968KYK/@@download/ENCFF968KYK.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity missing control alignments ENCFF577CIY bed narrowPeak peaks ENCSR641BSL ChIP-seq EFO:0002067 K562 cell line Homo sapiens AGO1-human ENCAB189GDE DNA SDS formaldehyde False 2017-02-27 ENCODE 2 ENCFF471TDC 5974176 ENCODE Processing Pipeline ccad72acf1f51fe8632102542f1352e1 https://www.encodeproject.org/files/ENCFF577CIY/@@download/ENCFF577CIY.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity missing control alignments ENCFF593VAW bigWig fold change over control ENCSR641BSL ChIP-seq EFO:0002067 K562 cell line Homo sapiens AGO1-human ENCAB189GDE DNA SDS formaldehyde False 2017-02-27 ENCODE 1 ENCFF360QAB 351994527 ENCODE Processing Pipeline efa35b6202a02464618b7ab0a82a1899 https://www.encodeproject.org/files/ENCFF593VAW/@@download/ENCFF593VAW.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity missing control alignments ENCFF849NJM bigWig fold change over control ENCSR641BSL ChIP-seq EFO:0002067 K562 cell line Homo sapiens AGO1-human ENCAB189GDE DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF360QAB, ENCFF471TDC 721613312 ENCODE Processing Pipeline be2eaa7781e21d1c369ff0ad8aefe803 https://www.encodeproject.org/files/ENCFF849NJM/@@download/ENCFF849NJM.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity missing control alignments ENCFF110JOA bed narrowPeak peaks ENCSR641BSL ChIP-seq EFO:0002067 K562 cell line Homo sapiens AGO1-human ENCAB189GDE DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF360QAB, ENCFF471TDC 7151450 ENCODE Processing Pipeline 0db23da7a4ed1023a9e624047836efda https://www.encodeproject.org/files/ENCFF110JOA/@@download/ENCFF110JOA.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity missing control alignments ENCFF497HRN bigBed narrowPeak peaks ENCSR641BSL ChIP-seq EFO:0002067 K562 cell line Homo sapiens AGO1-human ENCAB189GDE DNA SDS formaldehyde False 2017-02-27 ENCODE 1 ENCFF717NDQ 12931051 ENCODE Processing Pipeline f6b42f38e75aec98cbe46b863fbdc50d https://www.encodeproject.org/files/ENCFF497HRN/@@download/ENCFF497HRN.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity missing control alignments ENCFF200JEU bigBed narrowPeak conservative idr thresholded peaks ENCSR641BSL ChIP-seq EFO:0002067 K562 cell line Homo sapiens AGO1-human ENCAB189GDE DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF927SOS 515262 ENCODE Processing Pipeline 7e44de415f94b59f9ee3a3a618881200 https://www.encodeproject.org/files/ENCFF200JEU/@@download/ENCFF200JEU.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity missing control alignments ENCFF100VYA bed narrowPeak optimal idr thresholded peaks ENCSR641BSL ChIP-seq EFO:0002067 K562 cell line Homo sapiens AGO1-human ENCAB189GDE DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF110JOA, ENCFF419RSJ, ENCFF577CIY, ENCFF717NDQ 209513 ENCODE Processing Pipeline 132d647cfe6f35c66853b5033ea05b05 https://www.encodeproject.org/files/ENCFF100VYA/@@download/ENCFF100VYA.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity missing control alignments ENCFF000YSN bam alignments ENCSR000EGI ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAFF-human ENCAB717EYF DNA see document see document False 2012-05-14 ENCODE 1 1 507484140 Michael Snyder, Stanford 561f2f10719aa2f7d7218c381b6fbe33 https://www.encodeproject.org/files/ENCFF000YSN/@@download/ENCFF000YSN.bam hg19 archived low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample, missing derived_from ENCFF000YSO bam alignments ENCSR000EGI ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAFF-human ENCAB717EYF DNA see document see document False 2012-05-14 ENCODE 2 1 519390322 Michael Snyder, Stanford de36a1957a0ae6012bfb50fec2bfdf58 https://www.encodeproject.org/files/ENCFF000YSO/@@download/ENCFF000YSO.bam hg19 archived low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample, missing derived_from ENCFF000YSP bigBed narrowPeak peaks ENCSR000EGI ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAFF-human ENCAB717EYF DNA see document see document False 2012-05-14 ENCODE ENCFF001VNQ 2645051 Michael Snyder, Stanford 43793f9e81a01b24ecc801b7e543ec66 https://www.encodeproject.org/files/ENCFF000YSP/@@download/ENCFF000YSP.bigBed hg19 archived low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF000YSQ fastq reads ENCSR000EGI ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAFF-human ENCAB717EYF DNA see document see document False 2012-05-14 ENCODE 1 1 36 single-ended 1118378113 Michael Snyder, Stanford 2514d403b65428e724796a890cba24cf https://www.encodeproject.org/files/ENCFF000YSQ/@@download/ENCFF000YSQ.fastq.gz Illumina Genome Analyzer /files/ENCFF000YRB/ released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF000YSS fastq reads ENCSR000EGI ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAFF-human ENCAB717EYF DNA see document see document False 2012-05-14 ENCODE 2 1 36 single-ended 967626039 Michael Snyder, Stanford b1e8606086185e1d0759e0158d008033 https://www.encodeproject.org/files/ENCFF000YSS/@@download/ENCFF000YSS.fastq.gz Illumina Genome Analyzer /files/ENCFF000YRB/ released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF000YSU bigWig signal ENCSR000EGI ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAFF-human ENCAB717EYF DNA see document see document False 2012-05-14 ENCODE 397301421 Michael Snyder, Stanford 9989f87e5bf5169069255c0e3a38d92b https://www.encodeproject.org/files/ENCFF000YSU/@@download/ENCFF000YSU.bigWig hg19 archived low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample, missing derived_from ENCFF001VNQ bed narrowPeak peaks ENCSR000EGI ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAFF-human ENCAB717EYF DNA see document see document False 2012-05-14 ENCODE 1146115 Michael Snyder, Stanford b2475dc323cf53adefd969fd6e10afd0 https://www.encodeproject.org/files/ENCFF001VNQ/@@download/ENCFF001VNQ.bed.gz hg19 archived low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample, missing derived_from ENCFF002CXB bed narrowPeak optimal idr thresholded peaks ENCSR000EGI ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAFF-human ENCAB717EYF DNA see document see document False 2012-05-14 ENCODE 556411 ENCODE Consortium Analysis Working Group 184a4a65c0bd447f90055b014d4e2e95 https://www.encodeproject.org/files/ENCFF002CXB/@@download/ENCFF002CXB.bed.gz hg19 archived low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample, missing derived_from ENCFF761LUX bigBed narrowPeak optimal idr thresholded peaks ENCSR000EGI ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAFF-human ENCAB717EYF DNA see document see document False 2012-05-14 ENCODE ENCFF002CXB 1179491 ENCODE Consortium 91ff88a9cbdd5ef070f71dd22b843633 https://www.encodeproject.org/files/ENCFF761LUX/@@download/ENCFF761LUX.bigBed hg19 archived low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF017RID bam unfiltered alignments ENCSR000EGI ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAFF-human ENCAB717EYF DNA see document see document False 2012-05-14 ENCODE 1 36 ENCFF000YSQ, ENCFF643CGH 1274926047 ENCODE Processing Pipeline 6bd5cbcc44f0830190820b86dbe9baea https://www.encodeproject.org/files/ENCFF017RID/@@download/ENCFF017RID.bam GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF589IXE bam alignments ENCSR000EGI ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAFF-human ENCAB717EYF DNA see document see document False 2012-05-14 ENCODE 2 36 ENCFF000YSS, ENCFF643CGH 804073613 ENCODE Processing Pipeline 94e2ee2f0c82e0fb34ee311a66ddd34d https://www.encodeproject.org/files/ENCFF589IXE/@@download/ENCFF589IXE.bam GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF269UVL bam unfiltered alignments ENCSR000EGI ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAFF-human ENCAB717EYF DNA see document see document False 2012-05-14 ENCODE 2 36 ENCFF000YSS, ENCFF643CGH 1116515325 ENCODE Processing Pipeline 7f74bcb5ab25e6c765d8a283cc6ea509 https://www.encodeproject.org/files/ENCFF269UVL/@@download/ENCFF269UVL.bam GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF097GYE bam alignments ENCSR000EGI ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAFF-human ENCAB717EYF DNA see document see document False 2012-05-14 ENCODE 1 36 ENCFF000YSQ, ENCFF643CGH 855390389 ENCODE Processing Pipeline ae09d0023d46a108a029c381ff73c087 https://www.encodeproject.org/files/ENCFF097GYE/@@download/ENCFF097GYE.bam GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF146UJY bam unfiltered alignments ENCSR000EGI ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAFF-human ENCAB717EYF DNA see document see document False 2012-05-14 ENCODE 1 36 ENCFF000YSQ, ENCFF807MUK 1269303658 ENCODE Processing Pipeline 35e9a9d9c83f4e57bfca6b1ae0df6891 https://www.encodeproject.org/files/ENCFF146UJY/@@download/ENCFF146UJY.bam hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF160TSK bam alignments ENCSR000EGI ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAFF-human ENCAB717EYF DNA see document see document False 2012-05-14 ENCODE 1 36 ENCFF000YSQ, ENCFF807MUK 855991866 ENCODE Processing Pipeline 076efcf2edec117fef55d38bf1dd281b https://www.encodeproject.org/files/ENCFF160TSK/@@download/ENCFF160TSK.bam hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF558SMW bam unfiltered alignments ENCSR000EGI ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAFF-human ENCAB717EYF DNA see document see document False 2012-05-14 ENCODE 2 36 ENCFF000YSS, ENCFF807MUK 1111273237 ENCODE Processing Pipeline d9c804d0854ff3eca2f7bf3467aa7614 https://www.encodeproject.org/files/ENCFF558SMW/@@download/ENCFF558SMW.bam hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF749SYJ bam alignments ENCSR000EGI ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAFF-human ENCAB717EYF DNA see document see document False 2012-05-14 ENCODE 2 36 ENCFF000YSS, ENCFF807MUK 804552577 ENCODE Processing Pipeline 75d0fb4b9db8faf5ba10ba2d0b5f230a https://www.encodeproject.org/files/ENCFF749SYJ/@@download/ENCFF749SYJ.bam hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF138YWW bigWig signal p-value ENCSR000EGI ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAFF-human ENCAB717EYF DNA see document see document False 2012-05-14 ENCODE 2 ENCFF023NGN, ENCFF589IXE 466348254 ENCODE Processing Pipeline 115d31a1075020a53b1f68ccd965a27b https://www.encodeproject.org/files/ENCFF138YWW/@@download/ENCFF138YWW.bigWig GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF654DYQ bigWig signal p-value ENCSR000EGI ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAFF-human ENCAB717EYF DNA see document see document False 2012-05-14 ENCODE 1 ENCFF023NGN, ENCFF097GYE 456119911 ENCODE Processing Pipeline 848aa10bd9a8c3d09a141d51e53ec9d8 https://www.encodeproject.org/files/ENCFF654DYQ/@@download/ENCFF654DYQ.bigWig GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF527POU bigWig signal p-value ENCSR000EGI ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAFF-human ENCAB717EYF DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF023NGN, ENCFF097GYE, ENCFF589IXE 535053133 ENCODE Processing Pipeline e368aa32597ede783027e6a296c08b7f https://www.encodeproject.org/files/ENCFF527POU/@@download/ENCFF527POU.bigWig GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF754JJU bigWig fold change over control ENCSR000EGI ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAFF-human ENCAB717EYF DNA see document see document False 2012-05-14 ENCODE 1 ENCFF023NGN, ENCFF097GYE 413791404 ENCODE Processing Pipeline af4fa2e006ce09b69949e6082e27c0c8 https://www.encodeproject.org/files/ENCFF754JJU/@@download/ENCFF754JJU.bigWig GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF281FHT bigWig fold change over control ENCSR000EGI ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAFF-human ENCAB717EYF DNA see document see document False 2012-05-14 ENCODE 2 ENCFF023NGN, ENCFF589IXE 415769807 ENCODE Processing Pipeline 27341916ebef904dc6638ce81927b73f https://www.encodeproject.org/files/ENCFF281FHT/@@download/ENCFF281FHT.bigWig GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF291VIM bigWig fold change over control ENCSR000EGI ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAFF-human ENCAB717EYF DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF023NGN, ENCFF097GYE, ENCFF589IXE 687316365 ENCODE Processing Pipeline 996c72385b5ef1822f2fc2631e767686 https://www.encodeproject.org/files/ENCFF291VIM/@@download/ENCFF291VIM.bigWig GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF700ZVY bed narrowPeak peaks ENCSR000EGI ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAFF-human ENCAB717EYF DNA see document see document False 2012-05-14 ENCODE 2 ENCFF023NGN, ENCFF589IXE 5052256 ENCODE Processing Pipeline 89bdbc2aff23aae9a97dff9663253dcb https://www.encodeproject.org/files/ENCFF700ZVY/@@download/ENCFF700ZVY.bed.gz GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF389AAK bed narrowPeak peaks ENCSR000EGI ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAFF-human ENCAB717EYF DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF023NGN, ENCFF097GYE, ENCFF589IXE 3444253 ENCODE Processing Pipeline 8e442cd36eb622dab93c07ab0b8b16d6 https://www.encodeproject.org/files/ENCFF389AAK/@@download/ENCFF389AAK.bed.gz GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF283WGH bed narrowPeak peaks ENCSR000EGI ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAFF-human ENCAB717EYF DNA see document see document False 2012-05-14 ENCODE 1 ENCFF023NGN, ENCFF097GYE 4575718 ENCODE Processing Pipeline 2a5f6935885c2b6e0d3da5174087d484 https://www.encodeproject.org/files/ENCFF283WGH/@@download/ENCFF283WGH.bed.gz GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF956THC bigBed narrowPeak peaks ENCSR000EGI ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAFF-human ENCAB717EYF DNA see document see document False 2012-05-14 ENCODE 1 ENCFF283WGH 10978539 ENCODE Processing Pipeline 98707231266170cfd3f5876996cefabd https://www.encodeproject.org/files/ENCFF956THC/@@download/ENCFF956THC.bigBed GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF452YZB bigBed narrowPeak peaks ENCSR000EGI ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAFF-human ENCAB717EYF DNA see document see document False 2012-05-14 ENCODE 2 ENCFF700ZVY 11229602 ENCODE Processing Pipeline 461f11673e0637eda030952423d1d27b https://www.encodeproject.org/files/ENCFF452YZB/@@download/ENCFF452YZB.bigBed GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF644ESG bigBed narrowPeak peaks ENCSR000EGI ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAFF-human ENCAB717EYF DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF389AAK 6785496 ENCODE Processing Pipeline 09652e4e5453006aa2a4c882a905d41e https://www.encodeproject.org/files/ENCFF644ESG/@@download/ENCFF644ESG.bigBed GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF003UXM bed narrowPeak conservative idr thresholded peaks ENCSR000EGI ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAFF-human ENCAB717EYF DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF283WGH, ENCFF389AAK, ENCFF419RSJ, ENCFF700ZVY 378843 ENCODE Processing Pipeline 74de2195b5e8f82942feadb41018b9d1 https://www.encodeproject.org/files/ENCFF003UXM/@@download/ENCFF003UXM.bed.gz GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF923EUY bigBed narrowPeak conservative idr thresholded peaks ENCSR000EGI ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAFF-human ENCAB717EYF DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF003UXM 757277 ENCODE Processing Pipeline 96336335b32a657733393f885a571726 https://www.encodeproject.org/files/ENCFF923EUY/@@download/ENCFF923EUY.bigBed GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF498MGH bed narrowPeak optimal idr thresholded peaks ENCSR000EGI ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAFF-human ENCAB717EYF DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF283WGH, ENCFF389AAK, ENCFF419RSJ, ENCFF700ZVY 448897 ENCODE Processing Pipeline 46e06647fc96ac749c5a5de3d3cbce49 https://www.encodeproject.org/files/ENCFF498MGH/@@download/ENCFF498MGH.bed.gz GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF413VIZ bigBed narrowPeak optimal idr thresholded peaks ENCSR000EGI ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAFF-human ENCAB717EYF DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF498MGH 854766 ENCODE Processing Pipeline 65fbde7fdb163d13c05a36f8e4a20cff https://www.encodeproject.org/files/ENCFF413VIZ/@@download/ENCFF413VIZ.bigBed GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF632KEX bigWig signal p-value ENCSR000EGI ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAFF-human ENCAB717EYF DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF160TSK, ENCFF710NTS, ENCFF749SYJ 535537373 ENCODE Processing Pipeline edfd20fbad28ce313ca2ded8320e4281 https://www.encodeproject.org/files/ENCFF632KEX/@@download/ENCFF632KEX.bigWig hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF483XQO bed narrowPeak conservative idr thresholded peaks ENCSR000EGI ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAFF-human ENCAB717EYF DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF001TDO, ENCFF583NBG, ENCFF755LJZ, ENCFF864KPF 377733 ENCODE Processing Pipeline 2cca87c89b2620bb38a88037ade4e78d https://www.encodeproject.org/files/ENCFF483XQO/@@download/ENCFF483XQO.bed.gz hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF308IXJ bed narrowPeak optimal idr thresholded peaks ENCSR000EGI ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAFF-human ENCAB717EYF DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF001TDO, ENCFF583NBG, ENCFF755LJZ, ENCFF864KPF 460910 ENCODE Processing Pipeline 681c4962a27c4e34b59fc8490e917288 https://www.encodeproject.org/files/ENCFF308IXJ/@@download/ENCFF308IXJ.bed.gz hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF261CZF bigWig fold change over control ENCSR000EGI ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAFF-human ENCAB717EYF DNA see document see document False 2012-05-14 ENCODE 1 ENCFF160TSK, ENCFF710NTS 408221290 ENCODE Processing Pipeline 15e574912479660ac5f6a4bde6c772f9 https://www.encodeproject.org/files/ENCFF261CZF/@@download/ENCFF261CZF.bigWig hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF177AET bigWig fold change over control ENCSR000EGI ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAFF-human ENCAB717EYF DNA see document see document False 2012-05-14 ENCODE 2 ENCFF710NTS, ENCFF749SYJ 416005531 ENCODE Processing Pipeline bfb5acb24b626c84965372bb8edcc7f8 https://www.encodeproject.org/files/ENCFF177AET/@@download/ENCFF177AET.bigWig hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF117DXF bigWig signal p-value ENCSR000EGI ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAFF-human ENCAB717EYF DNA see document see document False 2012-05-14 ENCODE 1 ENCFF160TSK, ENCFF710NTS 399551241 ENCODE Processing Pipeline fc1f7cc313f8b009a427f2f2a58fee3e https://www.encodeproject.org/files/ENCFF117DXF/@@download/ENCFF117DXF.bigWig hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF203KGP bigWig signal p-value ENCSR000EGI ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAFF-human ENCAB717EYF DNA see document see document False 2012-05-14 ENCODE 2 ENCFF710NTS, ENCFF749SYJ 467458448 ENCODE Processing Pipeline d80887460b4f7627a46513a397ab46f2 https://www.encodeproject.org/files/ENCFF203KGP/@@download/ENCFF203KGP.bigWig hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF864KPF bed narrowPeak peaks ENCSR000EGI ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAFF-human ENCAB717EYF DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF160TSK, ENCFF710NTS, ENCFF749SYJ 3454555 ENCODE Processing Pipeline 28a0d206ad9f0c58408176c16513f403 https://www.encodeproject.org/files/ENCFF864KPF/@@download/ENCFF864KPF.bed.gz hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF791MGR bigBed narrowPeak peaks ENCSR000EGI ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAFF-human ENCAB717EYF DNA see document see document False 2012-05-14 ENCODE 1 ENCFF755LJZ 10972275 ENCODE Processing Pipeline 63e41b0e571029eb7ffe38bd792e4e0b https://www.encodeproject.org/files/ENCFF791MGR/@@download/ENCFF791MGR.bigBed hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF931BLV bigWig fold change over control ENCSR000EGI ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAFF-human ENCAB717EYF DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF160TSK, ENCFF710NTS, ENCFF749SYJ 688255276 ENCODE Processing Pipeline 093bfc4453f285c3ff5a4f0bbba99a5e https://www.encodeproject.org/files/ENCFF931BLV/@@download/ENCFF931BLV.bigWig hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF583NBG bed narrowPeak peaks ENCSR000EGI ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAFF-human ENCAB717EYF DNA see document see document False 2012-05-14 ENCODE 2 ENCFF710NTS, ENCFF749SYJ 5054985 ENCODE Processing Pipeline 6aee239046d6bf1e67dc315de774e846 https://www.encodeproject.org/files/ENCFF583NBG/@@download/ENCFF583NBG.bed.gz hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF425KOG bigBed narrowPeak optimal idr thresholded peaks ENCSR000EGI ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAFF-human ENCAB717EYF DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF308IXJ 869933 ENCODE Processing Pipeline 19e33a36a8c4b61b5344aef16c0f7246 https://www.encodeproject.org/files/ENCFF425KOG/@@download/ENCFF425KOG.bigBed hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF755LJZ bed narrowPeak peaks ENCSR000EGI ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAFF-human ENCAB717EYF DNA see document see document False 2012-05-14 ENCODE 1 ENCFF160TSK, ENCFF710NTS 4579891 ENCODE Processing Pipeline 9bed18f9f50fe4fe253a79d9ac223fdd https://www.encodeproject.org/files/ENCFF755LJZ/@@download/ENCFF755LJZ.bed.gz hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF760CHV bigBed narrowPeak peaks ENCSR000EGI ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAFF-human ENCAB717EYF DNA see document see document False 2012-05-14 ENCODE 2 ENCFF583NBG 11227965 ENCODE Processing Pipeline ed3d8c757886906c461453891f49f354 https://www.encodeproject.org/files/ENCFF760CHV/@@download/ENCFF760CHV.bigBed hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF092VSW bigBed narrowPeak peaks ENCSR000EGI ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAFF-human ENCAB717EYF DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF864KPF 6800895 ENCODE Processing Pipeline 9819dd0b30abc1dcb112ff2d252a22f5 https://www.encodeproject.org/files/ENCFF092VSW/@@download/ENCFF092VSW.bigBed hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF849GPV bigBed narrowPeak conservative idr thresholded peaks ENCSR000EGI ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAFF-human ENCAB717EYF DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF483XQO 754316 ENCODE Processing Pipeline 19622b8e87e8637e93a6943c90afd22a https://www.encodeproject.org/files/ENCFF849GPV/@@download/ENCFF849GPV.bigBed hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF000PZR bam alignments ENCSR000BKQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ETS1-human ENCAB000AGG DNA see document see document False 2011-07-18 ENCODE 1 ENCFF000QAD 724967517 Richard Myers, HAIB 44933e7b898c45a05c028fa556fe6df5 https://www.encodeproject.org/files/ENCFF000PZR/@@download/ENCFF000PZR.bam hg19 archived low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample control insufficient read depth ENCFF000PZS bigBed broadPeak peaks ENCSR000BKQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ETS1-human ENCAB000AGG DNA see document see document False 2011-07-18 ENCODE 1 1 ENCFF001UJV 277544 Richard Myers, HAIB c6ff6501ac73e183d411ed92b9b9478d https://www.encodeproject.org/files/ENCFF000PZS/@@download/ENCFF000PZS.bigBed hg19 archived low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample control insufficient read depth ENCFF000PZT bigBed broadPeak peaks ENCSR000BKQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ETS1-human ENCAB000AGG DNA see document see document False 2011-07-18 ENCODE 2 1 ENCFF001UJW 412886 Richard Myers, HAIB 05c16e30e01e5049f60565228351800f https://www.encodeproject.org/files/ENCFF000PZT/@@download/ENCFF000PZT.bigBed hg19 archived low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample control insufficient read depth ENCFF000PZU bam alignments ENCSR000BKQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ETS1-human ENCAB000AGG DNA see document see document False 2011-07-18 ENCODE 2 ENCFF000QAG 887356958 Richard Myers, HAIB a7f1d54b0ba75fe2d39fe2f15f27e12c https://www.encodeproject.org/files/ENCFF000PZU/@@download/ENCFF000PZU.bam hg19 archived low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample control insufficient read depth ENCFF000PZW bigWig raw signal ENCSR000BKQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ETS1-human ENCAB000AGG DNA see document see document False 2011-07-18 ENCODE 1 1 9304110 Richard Myers, HAIB 82774d4abfd3d4eaea053677cc62b0d5 https://www.encodeproject.org/files/ENCFF000PZW/@@download/ENCFF000PZW.bigWig hg19 archived low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample, missing derived_from control insufficient read depth ENCFF000PZX bigWig raw signal ENCSR000BKQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ETS1-human ENCAB000AGG DNA see document see document False 2011-07-18 ENCODE 2 1 14335386 Richard Myers, HAIB 342b5a20b68cf59da04e830d15fcfb81 https://www.encodeproject.org/files/ENCFF000PZX/@@download/ENCFF000PZX.bigWig hg19 archived low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample, missing derived_from control insufficient read depth ENCFF000QAD fastq reads ENCSR000BKQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ETS1-human ENCAB000AGG DNA see document see document False 2011-07-18 ENCODE 1 1 36 single-ended 639416588 Richard Myers, HAIB 41f21840663efa4d30658feb461bd82e https://www.encodeproject.org/files/ENCFF000QAD/@@download/ENCFF000QAD.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000QEX/ released low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample control insufficient read depth ENCFF000QAG fastq reads ENCSR000BKQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ETS1-human ENCAB000AGG DNA see document see document False 2011-07-18 ENCODE 2 1 36 single-ended 842080084 Richard Myers, HAIB d5ee5136c9faa9f506d3a6aa1de370c6 https://www.encodeproject.org/files/ENCFF000QAG/@@download/ENCFF000QAG.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000QEX/ released low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample control insufficient read depth ENCFF001UJV bed broadPeak peaks ENCSR000BKQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ETS1-human ENCAB000AGG DNA see document see document False 2011-07-18 ENCODE 1 1 130970 Richard Myers, HAIB ec22eab1c9937560e7edbf6f3ad4823e https://www.encodeproject.org/files/ENCFF001UJV/@@download/ENCFF001UJV.bed.gz hg19 archived low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample, missing derived_from control insufficient read depth ENCFF001UJW bed broadPeak peaks ENCSR000BKQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ETS1-human ENCAB000AGG DNA see document see document False 2011-07-18 ENCODE 2 1 216089 Richard Myers, HAIB bf4270991ba79f1639f996dfa4db6949 https://www.encodeproject.org/files/ENCFF001UJW/@@download/ENCFF001UJW.bed.gz hg19 archived low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample, missing derived_from control insufficient read depth ENCFF002CLX bed narrowPeak optimal idr thresholded peaks ENCSR000BKQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ETS1-human ENCAB000AGG DNA see document see document False 2011-07-18 ENCODE 212269 ENCODE Consortium Analysis Working Group 351582bb9b47db34b6c4e31180a91d50 https://www.encodeproject.org/files/ENCFF002CLX/@@download/ENCFF002CLX.bed.gz hg19 archived low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample, missing derived_from control insufficient read depth ENCFF360UPF bigBed narrowPeak optimal idr thresholded peaks ENCSR000BKQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ETS1-human ENCAB000AGG DNA see document see document False 2011-07-18 ENCODE ENCFF002CLX 517062 ENCODE Consortium dca239eafae13672688e4cfc228c637f https://www.encodeproject.org/files/ENCFF360UPF/@@download/ENCFF360UPF.bigBed hg19 archived low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample control insufficient read depth ENCFF906ZOM bam unfiltered alignments ENCSR000BKQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ETS1-human ENCAB000AGG DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000QAD, ENCFF643CGH 878463243 ENCODE Processing Pipeline 39cabd1b32442a256bf0e5f03d6b3bfc https://www.encodeproject.org/files/ENCFF906ZOM/@@download/ENCFF906ZOM.bam GRCh38 released low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample control insufficient read depth ENCFF401KIO bam alignments ENCSR000BKQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ETS1-human ENCAB000AGG DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000QAD, ENCFF643CGH 487812812 ENCODE Processing Pipeline 8531a957858f31e389f85b8844b2923c https://www.encodeproject.org/files/ENCFF401KIO/@@download/ENCFF401KIO.bam GRCh38 released low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample control insufficient read depth ENCFF639FFA bam unfiltered alignments ENCSR000BKQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ETS1-human ENCAB000AGG DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000QAG, ENCFF643CGH 1116340109 ENCODE Processing Pipeline cad8d73804fb0eb06cfc0507cf15a8e9 https://www.encodeproject.org/files/ENCFF639FFA/@@download/ENCFF639FFA.bam GRCh38 released low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample control insufficient read depth ENCFF398SXO bam alignments ENCSR000BKQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ETS1-human ENCAB000AGG DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000QAG, ENCFF643CGH 593850793 ENCODE Processing Pipeline 88209b545cbda3c0e4ec8efa5786855a https://www.encodeproject.org/files/ENCFF398SXO/@@download/ENCFF398SXO.bam GRCh38 released low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample control insufficient read depth ENCFF093QSS bam unfiltered alignments ENCSR000BKQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ETS1-human ENCAB000AGG DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000QAD, ENCFF807MUK 876794946 ENCODE Processing Pipeline 77836f583589c13544b784b03fc1f399 https://www.encodeproject.org/files/ENCFF093QSS/@@download/ENCFF093QSS.bam hg19 released low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample control insufficient read depth ENCFF006UXO bam alignments ENCSR000BKQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ETS1-human ENCAB000AGG DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000QAD, ENCFF807MUK 488117088 ENCODE Processing Pipeline 4068c0f0a3a9ae9ec765fb3bb351fbdd https://www.encodeproject.org/files/ENCFF006UXO/@@download/ENCFF006UXO.bam hg19 released low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample control insufficient read depth ENCFF364BDB bam unfiltered alignments ENCSR000BKQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ETS1-human ENCAB000AGG DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000QAG, ENCFF807MUK 1114739788 ENCODE Processing Pipeline 94f4a7f864f97dd4fa3c823ace992639 https://www.encodeproject.org/files/ENCFF364BDB/@@download/ENCFF364BDB.bam hg19 released low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample control insufficient read depth ENCFF468AKT bam alignments ENCSR000BKQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ETS1-human ENCAB000AGG DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000QAG, ENCFF807MUK 594261500 ENCODE Processing Pipeline 2a361fc67c68b5ce356d2d4892d8e622 https://www.encodeproject.org/files/ENCFF468AKT/@@download/ENCFF468AKT.bam hg19 released low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample control insufficient read depth ENCFF136XEI bigWig signal p-value ENCSR000BKQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ETS1-human ENCAB000AGG DNA see document see document False 2011-07-18 ENCODE 1 ENCFF401KIO, ENCFF772PJM 214353811 ENCODE Processing Pipeline c4cf495d4eb38c52d73035562a7b5dc0 https://www.encodeproject.org/files/ENCFF136XEI/@@download/ENCFF136XEI.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample control insufficient read depth ENCFF348XLA bigWig signal p-value ENCSR000BKQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ETS1-human ENCAB000AGG DNA see document see document False 2011-07-18 ENCODE 2 ENCFF398SXO, ENCFF772PJM 206940532 ENCODE Processing Pipeline 7a3867e7c4742a1633ed08d67b34f7b1 https://www.encodeproject.org/files/ENCFF348XLA/@@download/ENCFF348XLA.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample control insufficient read depth ENCFF151QKU bigWig signal p-value ENCSR000BKQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ETS1-human ENCAB000AGG DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF398SXO, ENCFF401KIO, ENCFF772PJM 188002672 ENCODE Processing Pipeline c64ed3c8ca120d5496dc416e30103657 https://www.encodeproject.org/files/ENCFF151QKU/@@download/ENCFF151QKU.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample control insufficient read depth ENCFF120VZU bigWig fold change over control ENCSR000BKQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ETS1-human ENCAB000AGG DNA see document see document False 2011-07-18 ENCODE 1 ENCFF401KIO, ENCFF772PJM 204647979 ENCODE Processing Pipeline 93876a08841395e9a8f9a36aebf88284 https://www.encodeproject.org/files/ENCFF120VZU/@@download/ENCFF120VZU.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample control insufficient read depth ENCFF912HSU bed narrowPeak peaks ENCSR000BKQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ETS1-human ENCAB000AGG DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF398SXO, ENCFF401KIO, ENCFF772PJM 5554652 ENCODE Processing Pipeline bb9b6f8752b916f9b14c57d4038020e5 https://www.encodeproject.org/files/ENCFF912HSU/@@download/ENCFF912HSU.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample control insufficient read depth ENCFF928OFV bed narrowPeak peaks ENCSR000BKQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ETS1-human ENCAB000AGG DNA see document see document False 2011-07-18 ENCODE 1 ENCFF401KIO, ENCFF772PJM 4608923 ENCODE Processing Pipeline d7acca94b1164ef2ee6e3e4e901095fd https://www.encodeproject.org/files/ENCFF928OFV/@@download/ENCFF928OFV.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample control insufficient read depth ENCFF068VFA bigBed narrowPeak peaks ENCSR000BKQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ETS1-human ENCAB000AGG DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF912HSU 12724921 ENCODE Processing Pipeline 5947e084e74c61dad3e47596855b8239 https://www.encodeproject.org/files/ENCFF068VFA/@@download/ENCFF068VFA.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample control insufficient read depth ENCFF825HSY bigWig fold change over control ENCSR000BKQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ETS1-human ENCAB000AGG DNA see document see document False 2011-07-18 ENCODE 2 ENCFF398SXO, ENCFF772PJM 223077456 ENCODE Processing Pipeline 6d3c8a86624468371d60ef05dd10dbc1 https://www.encodeproject.org/files/ENCFF825HSY/@@download/ENCFF825HSY.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample control insufficient read depth ENCFF291YLM bigWig fold change over control ENCSR000BKQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ETS1-human ENCAB000AGG DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF398SXO, ENCFF401KIO, ENCFF772PJM 378937514 ENCODE Processing Pipeline 8837ddc367fba206c67bd3fa785d3298 https://www.encodeproject.org/files/ENCFF291YLM/@@download/ENCFF291YLM.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample control insufficient read depth ENCFF501FIE bigBed narrowPeak peaks ENCSR000BKQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ETS1-human ENCAB000AGG DNA see document see document False 2011-07-18 ENCODE 1 ENCFF928OFV 10304445 ENCODE Processing Pipeline 8fce11503d55339d6e1090852097a87c https://www.encodeproject.org/files/ENCFF501FIE/@@download/ENCFF501FIE.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample control insufficient read depth ENCFF840ZBH bigBed narrowPeak peaks ENCSR000BKQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ETS1-human ENCAB000AGG DNA see document see document False 2011-07-18 ENCODE 2 ENCFF780KUW 4341364 ENCODE Processing Pipeline 86dd67c9a3f1a584df19eda9cd0e9b56 https://www.encodeproject.org/files/ENCFF840ZBH/@@download/ENCFF840ZBH.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample control insufficient read depth ENCFF461PRP bed narrowPeak optimal idr thresholded peaks ENCSR000BKQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ETS1-human ENCAB000AGG DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF419RSJ, ENCFF780KUW, ENCFF912HSU, ENCFF928OFV 206712 ENCODE Processing Pipeline 709b8e71866304816aad277c92c8a529 https://www.encodeproject.org/files/ENCFF461PRP/@@download/ENCFF461PRP.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample control insufficient read depth ENCFF780KUW bed narrowPeak peaks ENCSR000BKQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ETS1-human ENCAB000AGG DNA see document see document False 2011-07-18 ENCODE 2 ENCFF398SXO, ENCFF772PJM 1813656 ENCODE Processing Pipeline 0a31bd7c7d097b456fbae9809f31c11b https://www.encodeproject.org/files/ENCFF780KUW/@@download/ENCFF780KUW.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample control insufficient read depth ENCFF711WZW bigBed narrowPeak optimal idr thresholded peaks ENCSR000BKQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ETS1-human ENCAB000AGG DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF461PRP 462954 ENCODE Processing Pipeline dc5d7bfb892bbc16f8b536fa313f85e1 https://www.encodeproject.org/files/ENCFF711WZW/@@download/ENCFF711WZW.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample control insufficient read depth ENCFF850ASP bigWig signal p-value ENCSR000BKQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ETS1-human ENCAB000AGG DNA see document see document False 2011-07-18 ENCODE 1 ENCFF006UXO, ENCFF750MIM 214470706 ENCODE Processing Pipeline f549808fc83f25753a70d6851b2913a6 https://www.encodeproject.org/files/ENCFF850ASP/@@download/ENCFF850ASP.bigWig hg19 released low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample control insufficient read depth ENCFF448HHF bigWig signal p-value ENCSR000BKQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ETS1-human ENCAB000AGG DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF006UXO, ENCFF468AKT, ENCFF750MIM 187301300 ENCODE Processing Pipeline c1f9696c666b03ee0f7b8d16cf76c4ce https://www.encodeproject.org/files/ENCFF448HHF/@@download/ENCFF448HHF.bigWig hg19 released low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample control insufficient read depth ENCFF847NAK bigWig fold change over control ENCSR000BKQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ETS1-human ENCAB000AGG DNA see document see document False 2011-07-18 ENCODE 1 ENCFF006UXO, ENCFF750MIM 204881856 ENCODE Processing Pipeline 4bdfa0261a35ade57db3c6b7b963b828 https://www.encodeproject.org/files/ENCFF847NAK/@@download/ENCFF847NAK.bigWig hg19 released low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample control insufficient read depth ENCFF756IWD bigWig signal p-value ENCSR000BKQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ETS1-human ENCAB000AGG DNA see document see document False 2011-07-18 ENCODE 2 ENCFF468AKT, ENCFF750MIM 207073158 ENCODE Processing Pipeline 4231731c9b543bdb7645d370cf87c306 https://www.encodeproject.org/files/ENCFF756IWD/@@download/ENCFF756IWD.bigWig hg19 released low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample control insufficient read depth ENCFF537WYY bigBed narrowPeak peaks ENCSR000BKQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ETS1-human ENCAB000AGG DNA see document see document False 2011-07-18 ENCODE 1 ENCFF927YRG 10314990 ENCODE Processing Pipeline 886ee77c8fa66d75d4497b3dae160f2a https://www.encodeproject.org/files/ENCFF537WYY/@@download/ENCFF537WYY.bigBed hg19 released low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample control insufficient read depth ENCFF771GEW bigWig fold change over control ENCSR000BKQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ETS1-human ENCAB000AGG DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF006UXO, ENCFF468AKT, ENCFF750MIM 378032467 ENCODE Processing Pipeline 8f74d42ee92f96969091024599fc7add https://www.encodeproject.org/files/ENCFF771GEW/@@download/ENCFF771GEW.bigWig hg19 released low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample control insufficient read depth ENCFF927YRG bed narrowPeak peaks ENCSR000BKQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ETS1-human ENCAB000AGG DNA see document see document False 2011-07-18 ENCODE 1 ENCFF006UXO, ENCFF750MIM 4623186 ENCODE Processing Pipeline da847f33f2805400c0bc537204cf5d79 https://www.encodeproject.org/files/ENCFF927YRG/@@download/ENCFF927YRG.bed.gz hg19 released low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample control insufficient read depth ENCFF315GTG bigBed narrowPeak peaks ENCSR000BKQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ETS1-human ENCAB000AGG DNA see document see document False 2011-07-18 ENCODE 2 ENCFF122POU 4371385 ENCODE Processing Pipeline 1da351d3870c39189fdec0ab85f32a91 https://www.encodeproject.org/files/ENCFF315GTG/@@download/ENCFF315GTG.bigBed hg19 released low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample control insufficient read depth ENCFF580IGT bigBed narrowPeak peaks ENCSR000BKQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ETS1-human ENCAB000AGG DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF128BVU 12736524 ENCODE Processing Pipeline 29e3588b6d5774c604c2522b7f8be654 https://www.encodeproject.org/files/ENCFF580IGT/@@download/ENCFF580IGT.bigBed hg19 released low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample control insufficient read depth ENCFF973NZX bigWig fold change over control ENCSR000BKQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ETS1-human ENCAB000AGG DNA see document see document False 2011-07-18 ENCODE 2 ENCFF468AKT, ENCFF750MIM 221452352 ENCODE Processing Pipeline 6450f70df949c07d28bd23d29528d2b1 https://www.encodeproject.org/files/ENCFF973NZX/@@download/ENCFF973NZX.bigWig hg19 released low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample control insufficient read depth ENCFF656ADQ bigBed narrowPeak optimal idr thresholded peaks ENCSR000BKQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ETS1-human ENCAB000AGG DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF076YZO 472829 ENCODE Processing Pipeline cf4d40a59499d99b539889376dffe21f https://www.encodeproject.org/files/ENCFF656ADQ/@@download/ENCFF656ADQ.bigBed hg19 released low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample control insufficient read depth ENCFF122POU bed narrowPeak peaks ENCSR000BKQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ETS1-human ENCAB000AGG DNA see document see document False 2011-07-18 ENCODE 2 ENCFF468AKT, ENCFF750MIM 1820030 ENCODE Processing Pipeline 3996b4cd7ed8486c8ccf3b1580007027 https://www.encodeproject.org/files/ENCFF122POU/@@download/ENCFF122POU.bed.gz hg19 released low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample control insufficient read depth ENCFF128BVU bed narrowPeak peaks ENCSR000BKQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ETS1-human ENCAB000AGG DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF006UXO, ENCFF468AKT, ENCFF750MIM 5584296 ENCODE Processing Pipeline 6a6ee7a237768d5ae8ce93c250880c3e https://www.encodeproject.org/files/ENCFF128BVU/@@download/ENCFF128BVU.bed.gz hg19 released low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample control insufficient read depth ENCFF076YZO bed narrowPeak optimal idr thresholded peaks ENCSR000BKQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ETS1-human ENCAB000AGG DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF001TDO, ENCFF122POU, ENCFF128BVU, ENCFF927YRG 214196 ENCODE Processing Pipeline 124c1fdf52bdb35192e1849070affed9 https://www.encodeproject.org/files/ENCFF076YZO/@@download/ENCFF076YZO.bed.gz hg19 released low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample control insufficient read depth ENCFF495EIG bam unfiltered alignments ENCSR446LAV ChIP-seq EFO:0002067 K562 cell line Homo sapiens DDX20-human ENCAB398QAO DNA False 2016-04-22 ENCODE 2 100 ENCFF071FDG, ENCFF807MUK, ENCFF881HGO 4497466718 ENCODE Processing Pipeline d3b8aa05324d5e7a248e140f6c9cc496 https://www.encodeproject.org/files/ENCFF495EIG/@@download/ENCFF495EIG.bam hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF416DWT bam unfiltered alignments ENCSR446LAV ChIP-seq EFO:0002067 K562 cell line Homo sapiens DDX20-human ENCAB398QAO DNA False 2016-04-22 ENCODE 1 100 ENCFF771DFR, ENCFF807MUK, ENCFF931EDX 4034901237 ENCODE Processing Pipeline f8215af7e978795d444f7984a40d5de0 https://www.encodeproject.org/files/ENCFF416DWT/@@download/ENCFF416DWT.bam hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF771DFR fastq reads ENCSR446LAV ChIP-seq EFO:0002067 K562 cell line Homo sapiens DDX20-human ENCAB398QAO DNA False 2016-04-22 ENCODE 1 1 100 paired-ended 1 ENCFF931EDX 1796731148 Michael Snyder, Stanford 1d171754e9b67e1cfb3cc180a1acfd31 SRA:SRR5111586 https://www.encodeproject.org/files/ENCFF771DFR/@@download/ENCFF771DFR.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFF/ released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF881HGO fastq reads ENCSR446LAV ChIP-seq EFO:0002067 K562 cell line Homo sapiens DDX20-human ENCAB398QAO DNA False 2016-04-22 ENCODE 2 1 100 paired-ended 1 ENCFF071FDG 2080601313 Michael Snyder, Stanford 46ff5036770d3023489cdb0705c79042 SRA:SRR5111587 https://www.encodeproject.org/files/ENCFF881HGO/@@download/ENCFF881HGO.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFD/ released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF071FDG fastq reads ENCSR446LAV ChIP-seq EFO:0002067 K562 cell line Homo sapiens DDX20-human ENCAB398QAO DNA False 2016-04-22 ENCODE 2 1 100 paired-ended 2 ENCFF881HGO 2153950970 Michael Snyder, Stanford b22171185551357834f2bf0d8d5045ee SRA:SRR5111587 https://www.encodeproject.org/files/ENCFF071FDG/@@download/ENCFF071FDG.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFA/ released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF931EDX fastq reads ENCSR446LAV ChIP-seq EFO:0002067 K562 cell line Homo sapiens DDX20-human ENCAB398QAO DNA False 2016-04-22 ENCODE 1 1 100 paired-ended 2 ENCFF771DFR 1878263941 Michael Snyder, Stanford 4c94c8443fca03fa69ba9956029cc0da SRA:SRR5111586 https://www.encodeproject.org/files/ENCFF931EDX/@@download/ENCFF931EDX.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFH/ released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF539AVI bam alignments ENCSR446LAV ChIP-seq EFO:0002067 K562 cell line Homo sapiens DDX20-human ENCAB398QAO DNA False 2016-04-22 ENCODE 1 100 ENCFF771DFR, ENCFF807MUK, ENCFF931EDX 3108480001 ENCODE Processing Pipeline 559cb8bef608286d573c8e97b0c67455 https://www.encodeproject.org/files/ENCFF539AVI/@@download/ENCFF539AVI.bam hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF288YZC bam alignments ENCSR446LAV ChIP-seq EFO:0002067 K562 cell line Homo sapiens DDX20-human ENCAB398QAO DNA False 2016-04-22 ENCODE 2 100 ENCFF071FDG, ENCFF807MUK, ENCFF881HGO 3172366623 ENCODE Processing Pipeline 1bb95ea3d3d200acbdf6303a6c7d7a5d https://www.encodeproject.org/files/ENCFF288YZC/@@download/ENCFF288YZC.bam hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF964VFX bigWig signal p-value ENCSR446LAV ChIP-seq EFO:0002067 K562 cell line Homo sapiens DDX20-human ENCAB398QAO DNA False 2016-04-22 ENCODE 1 ENCFF539AVI, ENCFF581ZJL 1003318726 ENCODE Processing Pipeline 1b4beae1a2a98dfa765a2a110ee4393e https://www.encodeproject.org/files/ENCFF964VFX/@@download/ENCFF964VFX.bigWig hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF816XSH bigWig signal p-value ENCSR446LAV ChIP-seq EFO:0002067 K562 cell line Homo sapiens DDX20-human ENCAB398QAO DNA False 2016-04-22 ENCODE 2 ENCFF051LWI, ENCFF288YZC 1015681718 ENCODE Processing Pipeline de31fa04ee4745bbcc9299e3ca21d5d8 https://www.encodeproject.org/files/ENCFF816XSH/@@download/ENCFF816XSH.bigWig hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF004FTC bigWig fold change over control ENCSR446LAV ChIP-seq EFO:0002067 K562 cell line Homo sapiens DDX20-human ENCAB398QAO DNA False 2016-04-22 ENCODE 1 ENCFF539AVI, ENCFF581ZJL 1011233960 ENCODE Processing Pipeline 02c1e9123924e1b208f93c7f0adfd683 https://www.encodeproject.org/files/ENCFF004FTC/@@download/ENCFF004FTC.bigWig hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF923PXI bigWig signal p-value ENCSR446LAV ChIP-seq EFO:0002067 K562 cell line Homo sapiens DDX20-human ENCAB398QAO DNA False 2016-04-22 ENCODE 1, 2 ENCFF051LWI, ENCFF288YZC, ENCFF539AVI, ENCFF581ZJL 1925217947 ENCODE Processing Pipeline b8b47985ac17153d1a70f341130dead1 https://www.encodeproject.org/files/ENCFF923PXI/@@download/ENCFF923PXI.bigWig hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF926SEJ bigWig fold change over control ENCSR446LAV ChIP-seq EFO:0002067 K562 cell line Homo sapiens DDX20-human ENCAB398QAO DNA False 2016-04-22 ENCODE 2 ENCFF051LWI, ENCFF288YZC 962140488 ENCODE Processing Pipeline 4b3558f8cd9e528dc4f9f24ea4435b4c https://www.encodeproject.org/files/ENCFF926SEJ/@@download/ENCFF926SEJ.bigWig hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF390GHC bed narrowPeak peaks ENCSR446LAV ChIP-seq EFO:0002067 K562 cell line Homo sapiens DDX20-human ENCAB398QAO DNA False 2016-04-22 ENCODE 1 ENCFF539AVI, ENCFF581ZJL 6835475 ENCODE Processing Pipeline 1e4982da3ee81697cbcd6e206d6bd045 https://www.encodeproject.org/files/ENCFF390GHC/@@download/ENCFF390GHC.bed.gz hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF024QLB bigBed narrowPeak peaks ENCSR446LAV ChIP-seq EFO:0002067 K562 cell line Homo sapiens DDX20-human ENCAB398QAO DNA False 2016-04-22 ENCODE 2 ENCFF903NXY 13229847 ENCODE Processing Pipeline 650d5e5212c3e205c4f798ce79e4eb01 https://www.encodeproject.org/files/ENCFF024QLB/@@download/ENCFF024QLB.bigBed hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF038EVN bigWig fold change over control ENCSR446LAV ChIP-seq EFO:0002067 K562 cell line Homo sapiens DDX20-human ENCAB398QAO DNA False 2016-04-22 ENCODE 1, 2 ENCFF051LWI, ENCFF288YZC, ENCFF539AVI, ENCFF581ZJL 1902270778 ENCODE Processing Pipeline 5cf124cf4b04b21ae86cb26a2d47723c https://www.encodeproject.org/files/ENCFF038EVN/@@download/ENCFF038EVN.bigWig hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF355OVA bed narrowPeak peaks ENCSR446LAV ChIP-seq EFO:0002067 K562 cell line Homo sapiens DDX20-human ENCAB398QAO DNA False 2016-04-22 ENCODE 1, 2 ENCFF051LWI, ENCFF288YZC, ENCFF539AVI, ENCFF581ZJL 7203151 ENCODE Processing Pipeline 6a309cb361febca9809b97952c196ffd https://www.encodeproject.org/files/ENCFF355OVA/@@download/ENCFF355OVA.bed.gz hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF903NXY bed narrowPeak peaks ENCSR446LAV ChIP-seq EFO:0002067 K562 cell line Homo sapiens DDX20-human ENCAB398QAO DNA False 2016-04-22 ENCODE 2 ENCFF051LWI, ENCFF288YZC 6491428 ENCODE Processing Pipeline 39529d91dcd5aa5a8305a0601fdfcc31 https://www.encodeproject.org/files/ENCFF903NXY/@@download/ENCFF903NXY.bed.gz hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF658ZSW bigBed narrowPeak peaks ENCSR446LAV ChIP-seq EFO:0002067 K562 cell line Homo sapiens DDX20-human ENCAB398QAO DNA False 2016-04-22 ENCODE 1, 2 ENCFF355OVA 12869972 ENCODE Processing Pipeline 4d4c2b713ff8f483e3b340b87eedbe99 https://www.encodeproject.org/files/ENCFF658ZSW/@@download/ENCFF658ZSW.bigBed hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF697UBP bigBed narrowPeak peaks ENCSR446LAV ChIP-seq EFO:0002067 K562 cell line Homo sapiens DDX20-human ENCAB398QAO DNA False 2016-04-22 ENCODE 1 ENCFF390GHC 12971823 ENCODE Processing Pipeline 757abc2c1c435aae2ea4460a0c9e7470 https://www.encodeproject.org/files/ENCFF697UBP/@@download/ENCFF697UBP.bigBed hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF256ZQB bam unfiltered alignments ENCSR446LAV ChIP-seq EFO:0002067 K562 cell line Homo sapiens DDX20-human ENCAB398QAO DNA False 2016-04-22 ENCODE 2 100 ENCFF071FDG, ENCFF643CGH, ENCFF881HGO 4500009447 ENCODE Processing Pipeline 6f3a06079337272ce93f6890cc37b0c9 https://www.encodeproject.org/files/ENCFF256ZQB/@@download/ENCFF256ZQB.bam GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF522QSE bam unfiltered alignments ENCSR446LAV ChIP-seq EFO:0002067 K562 cell line Homo sapiens DDX20-human ENCAB398QAO DNA False 2016-04-22 ENCODE 1 100 ENCFF643CGH, ENCFF771DFR, ENCFF931EDX 4037165238 ENCODE Processing Pipeline 90431faeef877f96cc1d99fd8735359f https://www.encodeproject.org/files/ENCFF522QSE/@@download/ENCFF522QSE.bam GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF546ZLD bam alignments ENCSR446LAV ChIP-seq EFO:0002067 K562 cell line Homo sapiens DDX20-human ENCAB398QAO DNA False 2016-04-22 ENCODE 2 100 ENCFF071FDG, ENCFF643CGH, ENCFF881HGO 3173473404 ENCODE Processing Pipeline 8f0d0b75135525d994694663063d1d3c https://www.encodeproject.org/files/ENCFF546ZLD/@@download/ENCFF546ZLD.bam GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF562ATM bam alignments ENCSR446LAV ChIP-seq EFO:0002067 K562 cell line Homo sapiens DDX20-human ENCAB398QAO DNA False 2016-04-22 ENCODE 1 100 ENCFF643CGH, ENCFF771DFR, ENCFF931EDX 3109946312 ENCODE Processing Pipeline 96b42574ea083b41988598703d091128 https://www.encodeproject.org/files/ENCFF562ATM/@@download/ENCFF562ATM.bam GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF008XDF bigWig signal p-value ENCSR446LAV ChIP-seq EFO:0002067 K562 cell line Homo sapiens DDX20-human ENCAB398QAO DNA False 2016-04-22 ENCODE 1 ENCFF562ATM, ENCFF910IKB 950588981 ENCODE Processing Pipeline 960ec6efae145ad023a11ec74989a359 https://www.encodeproject.org/files/ENCFF008XDF/@@download/ENCFF008XDF.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF523JFP bigWig signal p-value ENCSR446LAV ChIP-seq EFO:0002067 K562 cell line Homo sapiens DDX20-human ENCAB398QAO DNA False 2016-04-22 ENCODE 2 ENCFF227IZS, ENCFF546ZLD 1018859607 ENCODE Processing Pipeline 4c98b7db6530adb70a3631c6c676cd51 https://www.encodeproject.org/files/ENCFF523JFP/@@download/ENCFF523JFP.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF622YMY bigWig signal p-value ENCSR446LAV ChIP-seq EFO:0002067 K562 cell line Homo sapiens DDX20-human ENCAB398QAO DNA False 2016-04-22 ENCODE 1, 2 ENCFF227IZS, ENCFF546ZLD, ENCFF562ATM, ENCFF910IKB 1904646473 ENCODE Processing Pipeline 16f3adcd2dcec52cf8954dc1f640aaf6 https://www.encodeproject.org/files/ENCFF622YMY/@@download/ENCFF622YMY.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF399BSB bigWig fold change over control ENCSR446LAV ChIP-seq EFO:0002067 K562 cell line Homo sapiens DDX20-human ENCAB398QAO DNA False 2016-04-22 ENCODE 1 ENCFF562ATM, ENCFF910IKB 1006095162 ENCODE Processing Pipeline 92575e1121dffa01e1585932088f71b2 https://www.encodeproject.org/files/ENCFF399BSB/@@download/ENCFF399BSB.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF801DDX bigWig fold change over control ENCSR446LAV ChIP-seq EFO:0002067 K562 cell line Homo sapiens DDX20-human ENCAB398QAO DNA False 2016-04-22 ENCODE 2 ENCFF227IZS, ENCFF546ZLD 954082882 ENCODE Processing Pipeline 3a89dd3a3e91dd354800c231e0aa0710 https://www.encodeproject.org/files/ENCFF801DDX/@@download/ENCFF801DDX.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF386YEM bigWig fold change over control ENCSR446LAV ChIP-seq EFO:0002067 K562 cell line Homo sapiens DDX20-human ENCAB398QAO DNA False 2016-04-22 ENCODE 1, 2 ENCFF227IZS, ENCFF546ZLD, ENCFF562ATM, ENCFF910IKB 1903789156 ENCODE Processing Pipeline 56bc50a8509e71cd3a5fd25413833845 https://www.encodeproject.org/files/ENCFF386YEM/@@download/ENCFF386YEM.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF850AYK bed narrowPeak peaks ENCSR446LAV ChIP-seq EFO:0002067 K562 cell line Homo sapiens DDX20-human ENCAB398QAO DNA False 2016-04-22 ENCODE 1 ENCFF562ATM, ENCFF910IKB 6741243 ENCODE Processing Pipeline 68edb27a79f1b89d1d90feb09f2f9e95 https://www.encodeproject.org/files/ENCFF850AYK/@@download/ENCFF850AYK.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF455YZU bed narrowPeak peaks ENCSR446LAV ChIP-seq EFO:0002067 K562 cell line Homo sapiens DDX20-human ENCAB398QAO DNA False 2016-04-22 ENCODE 2 ENCFF227IZS, ENCFF546ZLD 6313799 ENCODE Processing Pipeline dcd2a6f2df241f9e313cb0ca2e5336c0 https://www.encodeproject.org/files/ENCFF455YZU/@@download/ENCFF455YZU.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF046HDT bed narrowPeak peaks ENCSR446LAV ChIP-seq EFO:0002067 K562 cell line Homo sapiens DDX20-human ENCAB398QAO DNA False 2016-04-22 ENCODE 1, 2 ENCFF227IZS, ENCFF546ZLD, ENCFF562ATM, ENCFF910IKB 7160973 ENCODE Processing Pipeline 1a5e408ea4ccefb3fe976bb665b5300f https://www.encodeproject.org/files/ENCFF046HDT/@@download/ENCFF046HDT.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF713EQR bigBed narrowPeak peaks ENCSR446LAV ChIP-seq EFO:0002067 K562 cell line Homo sapiens DDX20-human ENCAB398QAO DNA False 2016-04-22 ENCODE 1 ENCFF850AYK 12980348 ENCODE Processing Pipeline 35fbffb3081b6899278b586d4d86034f https://www.encodeproject.org/files/ENCFF713EQR/@@download/ENCFF713EQR.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF745TOK bigBed narrowPeak peaks ENCSR446LAV ChIP-seq EFO:0002067 K562 cell line Homo sapiens DDX20-human ENCAB398QAO DNA False 2016-04-22 ENCODE 2 ENCFF455YZU 13215730 ENCODE Processing Pipeline 4bfb36162a078363b1d15ee29999592c https://www.encodeproject.org/files/ENCFF745TOK/@@download/ENCFF745TOK.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF108ARU bigBed narrowPeak peaks ENCSR446LAV ChIP-seq EFO:0002067 K562 cell line Homo sapiens DDX20-human ENCAB398QAO DNA False 2016-04-22 ENCODE 1, 2 ENCFF046HDT 12855039 ENCODE Processing Pipeline cc0cbfa764e331b1b9bedcd282ffd2c9 https://www.encodeproject.org/files/ENCFF108ARU/@@download/ENCFF108ARU.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF161EHH bed narrowPeak conservative idr thresholded peaks ENCSR446LAV ChIP-seq EFO:0002067 K562 cell line Homo sapiens DDX20-human ENCAB398QAO DNA False 2016-04-22 ENCODE 1, 2 ENCFF046HDT, ENCFF419RSJ, ENCFF455YZU, ENCFF850AYK 151813 ENCODE Processing Pipeline b3f0142a013dae17f1431e4c7f05000d https://www.encodeproject.org/files/ENCFF161EHH/@@download/ENCFF161EHH.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF876YVQ bigBed narrowPeak conservative idr thresholded peaks ENCSR446LAV ChIP-seq EFO:0002067 K562 cell line Homo sapiens DDX20-human ENCAB398QAO DNA False 2016-04-22 ENCODE 1, 2 ENCFF161EHH 332376 ENCODE Processing Pipeline 91a49fafb3d103bafded39cadf0295ec https://www.encodeproject.org/files/ENCFF876YVQ/@@download/ENCFF876YVQ.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF536LKB bed narrowPeak optimal idr thresholded peaks ENCSR446LAV ChIP-seq EFO:0002067 K562 cell line Homo sapiens DDX20-human ENCAB398QAO DNA False 2016-04-22 ENCODE 1, 2 ENCFF046HDT, ENCFF419RSJ, ENCFF455YZU, ENCFF850AYK 188949 ENCODE Processing Pipeline 8f6a1814b4ac0307dc16bca134697e6b https://www.encodeproject.org/files/ENCFF536LKB/@@download/ENCFF536LKB.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF482HGB bigBed narrowPeak optimal idr thresholded peaks ENCSR446LAV ChIP-seq EFO:0002067 K562 cell line Homo sapiens DDX20-human ENCAB398QAO DNA False 2016-04-22 ENCODE 1, 2 ENCFF536LKB 386443 ENCODE Processing Pipeline 4817d92d48910587ba957226a14a75bb https://www.encodeproject.org/files/ENCFF482HGB/@@download/ENCFF482HGB.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF584LRJ bigBed narrowPeak conservative idr thresholded peaks ENCSR446LAV ChIP-seq EFO:0002067 K562 cell line Homo sapiens DDX20-human ENCAB398QAO DNA False 2016-04-22 ENCODE 1, 2 ENCFF738XGF 303525 ENCODE Processing Pipeline 4e1455c35eed01454f6ee30943df1e39 https://www.encodeproject.org/files/ENCFF584LRJ/@@download/ENCFF584LRJ.bigBed hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF738XGF bed narrowPeak conservative idr thresholded peaks ENCSR446LAV ChIP-seq EFO:0002067 K562 cell line Homo sapiens DDX20-human ENCAB398QAO DNA False 2016-04-22 ENCODE 1, 2 ENCFF001TDO, ENCFF355OVA, ENCFF390GHC, ENCFF903NXY 130638 ENCODE Processing Pipeline 26afde19db8989bcb8941ebfa250e35d https://www.encodeproject.org/files/ENCFF738XGF/@@download/ENCFF738XGF.bed.gz hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF338HQY bed narrowPeak optimal idr thresholded peaks ENCSR446LAV ChIP-seq EFO:0002067 K562 cell line Homo sapiens DDX20-human ENCAB398QAO DNA False 2016-04-22 ENCODE 1, 2 ENCFF001TDO, ENCFF355OVA, ENCFF390GHC, ENCFF903NXY 158966 ENCODE Processing Pipeline 7a457cf032688b56edd701ad2d8a0330 https://www.encodeproject.org/files/ENCFF338HQY/@@download/ENCFF338HQY.bed.gz hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF511JNM bigBed narrowPeak optimal idr thresholded peaks ENCSR446LAV ChIP-seq EFO:0002067 K562 cell line Homo sapiens DDX20-human ENCAB398QAO DNA False 2016-04-22 ENCODE 1, 2 ENCFF338HQY 342828 ENCODE Processing Pipeline 98d69300fba882ecd88ac43163af0aad https://www.encodeproject.org/files/ENCFF511JNM/@@download/ENCFF511JNM.bigBed hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF000YJD bam alignments ENCSR000EZW ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour JUN-human ENCAB000AER DNA see document see document False 2011-10-29 ENCODE 1 ENCFF000YPR 706878875 Sherman Weissman, Yale 0ee593789527ee1ee273a27e6edc8f94 https://www.encodeproject.org/files/ENCFF000YJD/@@download/ENCFF000YJD.bam hg19 archived mixed read lengths, control low read depth, borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF000YJE bigBed narrowPeak peaks ENCSR000EZW ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour JUN-human ENCAB000AER DNA see document see document False 2011-10-29 ENCODE ENCFF001VMN 164349 Sherman Weissman, Yale c5ce43da2fd8347717c573884508e059 https://www.encodeproject.org/files/ENCFF000YJE/@@download/ENCFF000YJE.bigBed hg19 archived mixed read lengths, control low read depth, borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF000YJF bigWig signal ENCSR000EZW ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour JUN-human ENCAB000AER DNA see document see document False 2011-10-29 ENCODE 351005489 Sherman Weissman, Yale 5908f0e01e87873df0273cea4731a3db https://www.encodeproject.org/files/ENCFF000YJF/@@download/ENCFF000YJF.bigWig hg19 archived mixed read lengths, control low read depth, borderline replicate concordance biological replicates with identical biosample, missing derived_from insufficient read length, insufficient read depth ENCFF000YJG bam alignments ENCSR000EZW ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour JUN-human ENCAB000AER DNA see document see document False 2011-10-29 ENCODE 2 ENCFF000YPP 856671555 Sherman Weissman, Yale 9bc0b851aa07d0ccc69dae09ab4681b6 https://www.encodeproject.org/files/ENCFF000YJG/@@download/ENCFF000YJG.bam hg19 archived mixed read lengths, control low read depth, borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF000YPP fastq reads ENCSR000EZW ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour JUN-human ENCAB000AER DNA see document see document False 2011-10-29 ENCODE 2 1 34 single-ended 738358744 Sherman Weissman, Yale 5a8362a6945efefc662939d54f503fcb https://www.encodeproject.org/files/ENCFF000YPP/@@download/ENCFF000YPP.fastq.gz Illumina Genome Analyzer /files/ENCFF000YPZ/ released mixed read lengths, control low read depth, borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF000YPR fastq reads ENCSR000EZW ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour JUN-human ENCAB000AER DNA see document see document False 2011-10-29 ENCODE 1 1 27 single-ended 525780014 Sherman Weissman, Yale 9907c618b69e3b9a94a9ef6f86b90c9d https://www.encodeproject.org/files/ENCFF000YPR/@@download/ENCFF000YPR.fastq.gz Illumina Genome Analyzer /files/ENCFF000YPZ/ released mixed read lengths, control low read depth, borderline replicate concordance, inconsistent control read length biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF001VMN bed narrowPeak peaks ENCSR000EZW ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour JUN-human ENCAB000AER DNA see document see document False 2011-10-29 ENCODE 48236 Sherman Weissman, Yale 50b07ca6d4aab39d6d36941093ee1e2f https://www.encodeproject.org/files/ENCFF001VMN/@@download/ENCFF001VMN.bed.gz hg19 archived mixed read lengths, control low read depth, borderline replicate concordance biological replicates with identical biosample, missing derived_from insufficient read length, insufficient read depth ENCFF002CWB bed narrowPeak optimal idr thresholded peaks ENCSR000EZW ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour JUN-human ENCAB000AER DNA see document see document False 2011-10-29 ENCODE 159843 ENCODE Consortium Analysis Working Group 434c22a477db41bc83f31dc6197c638d https://www.encodeproject.org/files/ENCFF002CWB/@@download/ENCFF002CWB.bed.gz hg19 archived mixed read lengths, control low read depth, borderline replicate concordance biological replicates with identical biosample, missing derived_from insufficient read length, insufficient read depth ENCFF766WDI bigBed narrowPeak optimal idr thresholded peaks ENCSR000EZW ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour JUN-human ENCAB000AER DNA see document see document False 2011-10-29 ENCODE ENCFF002CWB 382505 ENCODE Consortium 373c184e80db4ecbb5eac5db4931b42e https://www.encodeproject.org/files/ENCFF766WDI/@@download/ENCFF766WDI.bigBed hg19 archived mixed read lengths, control low read depth, borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF814CHV bam alignments ENCSR000EZW ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour JUN-human ENCAB000AER DNA see document see document False 2011-10-29 ENCODE 1 27 ENCFF000YPR, ENCFF643CGH 311839170 ENCODE Processing Pipeline f52e3384654aee76a5b31da2e8307bb6 https://www.encodeproject.org/files/ENCFF814CHV/@@download/ENCFF814CHV.bam GRCh38 released mixed read lengths, control low read depth, borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF106WPL bam unfiltered alignments ENCSR000EZW ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour JUN-human ENCAB000AER DNA see document see document False 2011-10-29 ENCODE 1 27 ENCFF000YPR, ENCFF807MUK 707659593 ENCODE Processing Pipeline 0e91f6e970d15603c04e961c282bd719 https://www.encodeproject.org/files/ENCFF106WPL/@@download/ENCFF106WPL.bam hg19 released mixed read lengths, control low read depth, borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF774XWQ bam unfiltered alignments ENCSR000EZW ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour JUN-human ENCAB000AER DNA see document see document False 2011-10-29 ENCODE 1 27 ENCFF000YPR, ENCFF643CGH 709878995 ENCODE Processing Pipeline b962f247df40571a88b9b8ed82515ddf https://www.encodeproject.org/files/ENCFF774XWQ/@@download/ENCFF774XWQ.bam GRCh38 released mixed read lengths, control low read depth, borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF691WRY bam alignments ENCSR000EZW ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour JUN-human ENCAB000AER DNA see document see document False 2011-10-29 ENCODE 1 27 ENCFF000YPR, ENCFF807MUK 312256754 ENCODE Processing Pipeline b2738e913b4fa6d66dfbf324d0606664 https://www.encodeproject.org/files/ENCFF691WRY/@@download/ENCFF691WRY.bam hg19 released mixed read lengths, control low read depth, borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF892VDM bam unfiltered alignments ENCSR000EZW ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour JUN-human ENCAB000AER DNA see document see document False 2011-10-29 ENCODE 2 27 ENCFF000YPP, ENCFF807MUK 790950096 ENCODE Processing Pipeline 5831f25d56d411f51fe07ae4a8faeffe https://www.encodeproject.org/files/ENCFF892VDM/@@download/ENCFF892VDM.bam hg19 released mixed read lengths, control low read depth, borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF793SYX bam alignments ENCSR000EZW ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour JUN-human ENCAB000AER DNA see document see document False 2011-10-29 ENCODE 2 27 ENCFF000YPP, ENCFF807MUK 258911483 ENCODE Processing Pipeline d90f5d0e416d23627b664be522de71ea https://www.encodeproject.org/files/ENCFF793SYX/@@download/ENCFF793SYX.bam hg19 released mixed read lengths, control low read depth, borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF581CGZ bam unfiltered alignments ENCSR000EZW ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour JUN-human ENCAB000AER DNA see document see document False 2011-10-29 ENCODE 2 27 ENCFF000YPP, ENCFF643CGH 793673746 ENCODE Processing Pipeline 02eb60ceff85c68c24e08dcc9f7a7c85 https://www.encodeproject.org/files/ENCFF581CGZ/@@download/ENCFF581CGZ.bam GRCh38 released mixed read lengths, control low read depth, borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF050LIC bam alignments ENCSR000EZW ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour JUN-human ENCAB000AER DNA see document see document False 2011-10-29 ENCODE 2 27 ENCFF000YPP, ENCFF643CGH 258573795 ENCODE Processing Pipeline 3949567f5eb6ddf7e106d2fa95025932 https://www.encodeproject.org/files/ENCFF050LIC/@@download/ENCFF050LIC.bam GRCh38 released mixed read lengths, control low read depth, borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF305REQ bigWig fold change over control ENCSR000EZW ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour JUN-human ENCAB000AER DNA see document see document False 2011-10-29 ENCODE 1 ENCFF331ARQ, ENCFF691WRY 141315741 ENCODE Processing Pipeline 65a3e101f2aa73a9a3a8150048ffe33e https://www.encodeproject.org/files/ENCFF305REQ/@@download/ENCFF305REQ.bigWig hg19 released mixed read lengths, control low read depth, borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF157LRK bigWig signal p-value ENCSR000EZW ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour JUN-human ENCAB000AER DNA see document see document False 2011-10-29 ENCODE 1 ENCFF482LDC, ENCFF814CHV 251774620 ENCODE Processing Pipeline 5d36b6c7f5c584b960218c3ff27028b7 https://www.encodeproject.org/files/ENCFF157LRK/@@download/ENCFF157LRK.bigWig GRCh38 released mixed read lengths, control low read depth, borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF797PHS bigWig signal p-value ENCSR000EZW ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour JUN-human ENCAB000AER DNA see document see document False 2011-10-29 ENCODE 2 ENCFF331ARQ, ENCFF793SYX 205585270 ENCODE Processing Pipeline 538028f62d9a10f88e2d9aa51e086c8f https://www.encodeproject.org/files/ENCFF797PHS/@@download/ENCFF797PHS.bigWig hg19 released mixed read lengths, control low read depth, borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF678SWM bigWig signal p-value ENCSR000EZW ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour JUN-human ENCAB000AER DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF331ARQ, ENCFF691WRY, ENCFF793SYX 269570077 ENCODE Processing Pipeline 48039f75a2259c778f2a1606bae7252f https://www.encodeproject.org/files/ENCFF678SWM/@@download/ENCFF678SWM.bigWig hg19 released mixed read lengths, control low read depth, borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF033ZBR bigWig signal p-value ENCSR000EZW ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour JUN-human ENCAB000AER DNA see document see document False 2011-10-29 ENCODE 1 ENCFF331ARQ, ENCFF691WRY 250791338 ENCODE Processing Pipeline f39528987f727b8535801aa58cfb3c19 https://www.encodeproject.org/files/ENCFF033ZBR/@@download/ENCFF033ZBR.bigWig hg19 released mixed read lengths, control low read depth, borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF843CDB bigWig signal p-value ENCSR000EZW ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour JUN-human ENCAB000AER DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF050LIC, ENCFF482LDC, ENCFF814CHV 269152592 ENCODE Processing Pipeline 59f615a8082c1dcf003d9d867edc4b93 https://www.encodeproject.org/files/ENCFF843CDB/@@download/ENCFF843CDB.bigWig GRCh38 released mixed read lengths, control low read depth, borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF728EZD bigWig signal p-value ENCSR000EZW ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour JUN-human ENCAB000AER DNA see document see document False 2011-10-29 ENCODE 2 ENCFF050LIC, ENCFF482LDC 203370566 ENCODE Processing Pipeline 6fd0e2c61642dd4ad2e12d403befdf33 https://www.encodeproject.org/files/ENCFF728EZD/@@download/ENCFF728EZD.bigWig GRCh38 released mixed read lengths, control low read depth, borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF825SKH bigWig fold change over control ENCSR000EZW ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour JUN-human ENCAB000AER DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF331ARQ, ENCFF691WRY, ENCFF793SYX 238843590 ENCODE Processing Pipeline c101854cfcf52aad59986a00231b2f17 https://www.encodeproject.org/files/ENCFF825SKH/@@download/ENCFF825SKH.bigWig hg19 released mixed read lengths, control low read depth, borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF187UYW bigBed narrowPeak peaks ENCSR000EZW ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour JUN-human ENCAB000AER DNA see document see document False 2011-10-29 ENCODE 1 ENCFF052OWI 5179043 ENCODE Processing Pipeline 27bbbb87aa8d7b41b296bc52c9f5621b https://www.encodeproject.org/files/ENCFF187UYW/@@download/ENCFF187UYW.bigBed hg19 released mixed read lengths, control low read depth, borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF700OSS bigWig fold change over control ENCSR000EZW ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour JUN-human ENCAB000AER DNA see document see document False 2011-10-29 ENCODE 1 ENCFF482LDC, ENCFF814CHV 140704436 ENCODE Processing Pipeline 0fe01e33a11ea0f60376b3e6048f8c7d https://www.encodeproject.org/files/ENCFF700OSS/@@download/ENCFF700OSS.bigWig GRCh38 released mixed read lengths, control low read depth, borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF436KCV bed narrowPeak peaks ENCSR000EZW ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour JUN-human ENCAB000AER DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF331ARQ, ENCFF691WRY, ENCFF793SYX 4310569 ENCODE Processing Pipeline cdf4ec1b8015e105b4b5e12560ceb1fa https://www.encodeproject.org/files/ENCFF436KCV/@@download/ENCFF436KCV.bed.gz hg19 released mixed read lengths, control low read depth, borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF821GNR bigWig fold change over control ENCSR000EZW ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour JUN-human ENCAB000AER DNA see document see document False 2011-10-29 ENCODE 2 ENCFF331ARQ, ENCFF793SYX 115856383 ENCODE Processing Pipeline 4351b7e9940b6043dfe57c841d795b37 https://www.encodeproject.org/files/ENCFF821GNR/@@download/ENCFF821GNR.bigWig hg19 released mixed read lengths, control low read depth, borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF955EAV bigWig fold change over control ENCSR000EZW ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour JUN-human ENCAB000AER DNA see document see document False 2011-10-29 ENCODE 2 ENCFF050LIC, ENCFF482LDC 123051356 ENCODE Processing Pipeline 0c528356714924f1c5d8f4a40d8345c9 https://www.encodeproject.org/files/ENCFF955EAV/@@download/ENCFF955EAV.bigWig GRCh38 released mixed read lengths, control low read depth, borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF052OWI bed narrowPeak peaks ENCSR000EZW ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour JUN-human ENCAB000AER DNA see document see document False 2011-10-29 ENCODE 1 ENCFF331ARQ, ENCFF691WRY 2438263 ENCODE Processing Pipeline 8e39fba942c4a657192a5716e9c84702 https://www.encodeproject.org/files/ENCFF052OWI/@@download/ENCFF052OWI.bed.gz hg19 released mixed read lengths, control low read depth, borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF394RSM bed narrowPeak peaks ENCSR000EZW ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour JUN-human ENCAB000AER DNA see document see document False 2011-10-29 ENCODE 2 ENCFF331ARQ, ENCFF793SYX 2131563 ENCODE Processing Pipeline 14ba65ae5c45d842c41cd3fc22b91023 https://www.encodeproject.org/files/ENCFF394RSM/@@download/ENCFF394RSM.bed.gz hg19 released mixed read lengths, control low read depth, borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF435LLW bigBed narrowPeak peaks ENCSR000EZW ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour JUN-human ENCAB000AER DNA see document see document False 2011-10-29 ENCODE 2 ENCFF394RSM 4416053 ENCODE Processing Pipeline 1db6bffd0f3c633ebfaf96050bee8393 https://www.encodeproject.org/files/ENCFF435LLW/@@download/ENCFF435LLW.bigBed hg19 released mixed read lengths, control low read depth, borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF081FTI bigWig fold change over control ENCSR000EZW ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour JUN-human ENCAB000AER DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF050LIC, ENCFF482LDC, ENCFF814CHV 238774275 ENCODE Processing Pipeline 9312a4ceb8b87e52ab1d31c9fa6d88f8 https://www.encodeproject.org/files/ENCFF081FTI/@@download/ENCFF081FTI.bigWig GRCh38 released mixed read lengths, control low read depth, borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF618VRU bed narrowPeak peaks ENCSR000EZW ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour JUN-human ENCAB000AER DNA see document see document False 2011-10-29 ENCODE 1 ENCFF482LDC, ENCFF814CHV 2400958 ENCODE Processing Pipeline 9213baf30ca20a911d24ec577c36c487 https://www.encodeproject.org/files/ENCFF618VRU/@@download/ENCFF618VRU.bed.gz GRCh38 released mixed read lengths, control low read depth, borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF192BTP bed narrowPeak optimal idr thresholded peaks ENCSR000EZW ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour JUN-human ENCAB000AER DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF001TDO, ENCFF052OWI, ENCFF394RSM, ENCFF436KCV 111175 ENCODE Processing Pipeline f6d9722fc246ece97dc02a364d78a156 https://www.encodeproject.org/files/ENCFF192BTP/@@download/ENCFF192BTP.bed.gz hg19 released mixed read lengths, control low read depth, borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF457CKY bigBed narrowPeak conservative idr thresholded peaks ENCSR000EZW ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour JUN-human ENCAB000AER DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF527WUV 198341 ENCODE Processing Pipeline 04bf461d50900818e8d553b56941875b https://www.encodeproject.org/files/ENCFF457CKY/@@download/ENCFF457CKY.bigBed hg19 released mixed read lengths, control low read depth, borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF569WKK bigBed narrowPeak optimal idr thresholded peaks ENCSR000EZW ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour JUN-human ENCAB000AER DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF192BTP 265288 ENCODE Processing Pipeline 9b5873efb24acd15129b48f52522894f https://www.encodeproject.org/files/ENCFF569WKK/@@download/ENCFF569WKK.bigBed hg19 released mixed read lengths, control low read depth, borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF546PAM bed narrowPeak peaks ENCSR000EZW ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour JUN-human ENCAB000AER DNA see document see document False 2011-10-29 ENCODE 2 ENCFF050LIC, ENCFF482LDC 2119187 ENCODE Processing Pipeline 6fb8c400d06b6c74f5c940433c13b188 https://www.encodeproject.org/files/ENCFF546PAM/@@download/ENCFF546PAM.bed.gz GRCh38 released mixed read lengths, control low read depth, borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF154BPB bigBed narrowPeak peaks ENCSR000EZW ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour JUN-human ENCAB000AER DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF436KCV 10296418 ENCODE Processing Pipeline ac73077ff3d4eff43770c34b0b8c04aa https://www.encodeproject.org/files/ENCFF154BPB/@@download/ENCFF154BPB.bigBed hg19 released mixed read lengths, control low read depth, borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF527WUV bed narrowPeak conservative idr thresholded peaks ENCSR000EZW ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour JUN-human ENCAB000AER DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF001TDO, ENCFF052OWI, ENCFF394RSM, ENCFF436KCV 93899 ENCODE Processing Pipeline 32d291509934a841c40d53ff33256853 https://www.encodeproject.org/files/ENCFF527WUV/@@download/ENCFF527WUV.bed.gz hg19 released mixed read lengths, control low read depth, borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF023XYC bed narrowPeak peaks ENCSR000EZW ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour JUN-human ENCAB000AER DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF050LIC, ENCFF482LDC, ENCFF814CHV 4296452 ENCODE Processing Pipeline 7babc54db99f0be5e36fd9335d46b925 https://www.encodeproject.org/files/ENCFF023XYC/@@download/ENCFF023XYC.bed.gz GRCh38 released mixed read lengths, control low read depth, borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF635JJR bigBed narrowPeak peaks ENCSR000EZW ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour JUN-human ENCAB000AER DNA see document see document False 2011-10-29 ENCODE 1 ENCFF618VRU 5103844 ENCODE Processing Pipeline 966f5fa96b14baa8d94f089a30e2405b https://www.encodeproject.org/files/ENCFF635JJR/@@download/ENCFF635JJR.bigBed GRCh38 released mixed read lengths, control low read depth, borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF234MAW bigBed narrowPeak peaks ENCSR000EZW ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour JUN-human ENCAB000AER DNA see document see document False 2011-10-29 ENCODE 2 ENCFF546PAM 4400160 ENCODE Processing Pipeline 4b787aa64eaf63acceeeb624f6af4109 https://www.encodeproject.org/files/ENCFF234MAW/@@download/ENCFF234MAW.bigBed GRCh38 released mixed read lengths, control low read depth, borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF440SQT bigBed narrowPeak peaks ENCSR000EZW ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour JUN-human ENCAB000AER DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF023XYC 10270408 ENCODE Processing Pipeline 7f7d015902dfdc64fa74bdf4ae1c5ba3 https://www.encodeproject.org/files/ENCFF440SQT/@@download/ENCFF440SQT.bigBed GRCh38 released mixed read lengths, control low read depth, borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF673OJN bigBed narrowPeak conservative idr thresholded peaks ENCSR000EZW ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour JUN-human ENCAB000AER DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF058LTT 193104 ENCODE Processing Pipeline d89b54551e98f5b1e172d756a74039a0 https://www.encodeproject.org/files/ENCFF673OJN/@@download/ENCFF673OJN.bigBed GRCh38 released mixed read lengths, control low read depth, borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF058LTT bed narrowPeak conservative idr thresholded peaks ENCSR000EZW ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour JUN-human ENCAB000AER DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF023XYC, ENCFF419RSJ, ENCFF546PAM, ENCFF618VRU 90163 ENCODE Processing Pipeline d05615565c6f8b7164cfb8592e32fa37 https://www.encodeproject.org/files/ENCFF058LTT/@@download/ENCFF058LTT.bed.gz GRCh38 released mixed read lengths, control low read depth, borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF881AVX bed narrowPeak optimal idr thresholded peaks ENCSR000EZW ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour JUN-human ENCAB000AER DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF023XYC, ENCFF419RSJ, ENCFF546PAM, ENCFF618VRU 109084 ENCODE Processing Pipeline 53d7ceedc495abecf48529eda56f93a9 https://www.encodeproject.org/files/ENCFF881AVX/@@download/ENCFF881AVX.bed.gz GRCh38 released mixed read lengths, control low read depth, borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF614GYI bigBed narrowPeak optimal idr thresholded peaks ENCSR000EZW ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour JUN-human ENCAB000AER DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF881AVX 218795 ENCODE Processing Pipeline 035ffde8be219adec7c7ebe5da21fcb8 https://www.encodeproject.org/files/ENCFF614GYI/@@download/ENCFF614GYI.bigBed GRCh38 released mixed read lengths, control low read depth, borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF959QTN fastq reads ENCSR863KUB ChIP-seq EFO:0002067 K562 cell line Homo sapiens TCF7-human ENCAB000ACR DNA False 2016-01-14 ENCODE 2 1 50 single-ended 1329891159 Richard Myers, HAIB 139c4b5b2b7df7f0830d71495b962e7c SRA:SRR5339427 https://www.encodeproject.org/files/ENCFF959QTN/@@download/ENCFF959QTN.fastq.gz Illumina HiSeq 2000 /files/ENCFF002BGC/ released borderline replicate concordance, low read depth, antibody characterized with exemption missing control alignments ENCFF204JMO fastq reads ENCSR863KUB ChIP-seq EFO:0002067 K562 cell line Homo sapiens TCF7-human ENCAB000ACR DNA False 2016-01-14 ENCODE 1 1 50 single-ended 2137886747 Richard Myers, HAIB 3d7df65026afdbf0ed8584ee3a91c06f SRA:SRR5339426 https://www.encodeproject.org/files/ENCFF204JMO/@@download/ENCFF204JMO.fastq.gz Illumina HiSeq 2000 /files/ENCFF001RVO/ released borderline replicate concordance, low read depth, antibody characterized with exemption missing control alignments ENCFF946BKE bam alignments ENCSR863KUB ChIP-seq EFO:0002067 K562 cell line Homo sapiens TCF7-human ENCAB000ACR DNA False 2016-01-14 ENCODE 2 50 ENCFF807MUK, ENCFF959QTN 1069901936 ENCODE Processing Pipeline b9efb0051d67fbf9492c1fe10f09a005 https://www.encodeproject.org/files/ENCFF946BKE/@@download/ENCFF946BKE.bam hg19 released borderline replicate concordance, low read depth, antibody characterized with exemption missing control alignments ENCFF862PIC bam alignments ENCSR863KUB ChIP-seq EFO:0002067 K562 cell line Homo sapiens TCF7-human ENCAB000ACR DNA False 2016-01-14 ENCODE 1 50 ENCFF204JMO, ENCFF807MUK 1624723653 ENCODE Processing Pipeline 2738b8297ac2a9fc8786e17bc7844de8 https://www.encodeproject.org/files/ENCFF862PIC/@@download/ENCFF862PIC.bam hg19 released borderline replicate concordance, low read depth, antibody characterized with exemption missing control alignments ENCFF087TRL bam unfiltered alignments ENCSR863KUB ChIP-seq EFO:0002067 K562 cell line Homo sapiens TCF7-human ENCAB000ACR DNA False 2016-01-14 ENCODE 2 50 ENCFF643CGH, ENCFF959QTN 1435019191 ENCODE Processing Pipeline c9eb686b986041921981cdc419cd16e9 https://www.encodeproject.org/files/ENCFF087TRL/@@download/ENCFF087TRL.bam GRCh38 released borderline replicate concordance, low read depth, antibody characterized with exemption missing control alignments ENCFF678DAV bam unfiltered alignments ENCSR863KUB ChIP-seq EFO:0002067 K562 cell line Homo sapiens TCF7-human ENCAB000ACR DNA False 2016-01-14 ENCODE 1 50 ENCFF204JMO, ENCFF643CGH 2256386454 ENCODE Processing Pipeline a332934800c5ac0b62c19f9912c07849 https://www.encodeproject.org/files/ENCFF678DAV/@@download/ENCFF678DAV.bam GRCh38 released borderline replicate concordance, low read depth, antibody characterized with exemption missing control alignments ENCFF587PVQ bam alignments ENCSR863KUB ChIP-seq EFO:0002067 K562 cell line Homo sapiens TCF7-human ENCAB000ACR DNA False 2016-01-14 ENCODE 2 50 ENCFF643CGH, ENCFF959QTN 1069440142 ENCODE Processing Pipeline ff7c03249ca5cfec1c27f89d62d949d1 https://www.encodeproject.org/files/ENCFF587PVQ/@@download/ENCFF587PVQ.bam GRCh38 released borderline replicate concordance, low read depth, antibody characterized with exemption missing control alignments ENCFF742TAS bam alignments ENCSR863KUB ChIP-seq EFO:0002067 K562 cell line Homo sapiens TCF7-human ENCAB000ACR DNA False 2016-01-14 ENCODE 1 50 ENCFF204JMO, ENCFF643CGH 1624070612 ENCODE Processing Pipeline 326fef1303a337b302cab0c95306f98b https://www.encodeproject.org/files/ENCFF742TAS/@@download/ENCFF742TAS.bam GRCh38 released borderline replicate concordance, low read depth, antibody characterized with exemption missing control alignments ENCFF072ULT bigWig signal p-value ENCSR863KUB ChIP-seq EFO:0002067 K562 cell line Homo sapiens TCF7-human ENCAB000ACR DNA False 2016-01-14 ENCODE 1 ENCFF742TAS 1129064676 ENCODE Processing Pipeline e7492caede283d63c043dcf0f441fb94 https://www.encodeproject.org/files/ENCFF072ULT/@@download/ENCFF072ULT.bigWig GRCh38 released borderline replicate concordance, low read depth, antibody characterized with exemption missing control alignments ENCFF571OMJ bigWig signal p-value ENCSR863KUB ChIP-seq EFO:0002067 K562 cell line Homo sapiens TCF7-human ENCAB000ACR DNA False 2016-01-14 ENCODE 2 ENCFF587PVQ 970182561 ENCODE Processing Pipeline 1a0f09f2bbdeeaca28ec39edf0bfe5a3 https://www.encodeproject.org/files/ENCFF571OMJ/@@download/ENCFF571OMJ.bigWig GRCh38 released borderline replicate concordance, low read depth, antibody characterized with exemption missing control alignments ENCFF536WVV bigWig signal p-value ENCSR863KUB ChIP-seq EFO:0002067 K562 cell line Homo sapiens TCF7-human ENCAB000ACR DNA False 2016-01-14 ENCODE 1, 2 ENCFF587PVQ, ENCFF742TAS 1352603340 ENCODE Processing Pipeline bc95db5d23fa9a71d4cb0ed4d55616f2 https://www.encodeproject.org/files/ENCFF536WVV/@@download/ENCFF536WVV.bigWig GRCh38 released borderline replicate concordance, low read depth, antibody characterized with exemption missing control alignments ENCFF541PYZ bigWig fold change over control ENCSR863KUB ChIP-seq EFO:0002067 K562 cell line Homo sapiens TCF7-human ENCAB000ACR DNA False 2016-01-14 ENCODE 1 ENCFF742TAS 906939221 ENCODE Processing Pipeline d7eb652986ee293a724a0608d60c4769 https://www.encodeproject.org/files/ENCFF541PYZ/@@download/ENCFF541PYZ.bigWig GRCh38 released borderline replicate concordance, low read depth, antibody characterized with exemption missing control alignments ENCFF008DSY bigWig fold change over control ENCSR863KUB ChIP-seq EFO:0002067 K562 cell line Homo sapiens TCF7-human ENCAB000ACR DNA False 2016-01-14 ENCODE 2 ENCFF587PVQ 697503867 ENCODE Processing Pipeline 98a2461e7c87a4e1cadd813f8fea5d9c https://www.encodeproject.org/files/ENCFF008DSY/@@download/ENCFF008DSY.bigWig GRCh38 released borderline replicate concordance, low read depth, antibody characterized with exemption missing control alignments ENCFF957KCO bigWig fold change over control ENCSR863KUB ChIP-seq EFO:0002067 K562 cell line Homo sapiens TCF7-human ENCAB000ACR DNA False 2016-01-14 ENCODE 1, 2 ENCFF587PVQ, ENCFF742TAS 1295839093 ENCODE Processing Pipeline 702fa1d3ef2e146000378859086fcc7f https://www.encodeproject.org/files/ENCFF957KCO/@@download/ENCFF957KCO.bigWig GRCh38 released borderline replicate concordance, low read depth, antibody characterized with exemption missing control alignments ENCFF482KCZ bigBed narrowPeak peaks ENCSR863KUB ChIP-seq EFO:0002067 K562 cell line Homo sapiens TCF7-human ENCAB000ACR DNA False 2016-01-14 ENCODE 1, 2 ENCFF575VCO 13336359 ENCODE Processing Pipeline 4117164d454471ffa216c3d3e0462103 https://www.encodeproject.org/files/ENCFF482KCZ/@@download/ENCFF482KCZ.bigBed GRCh38 released borderline replicate concordance, low read depth, antibody characterized with exemption missing control alignments ENCFF575VCO bed narrowPeak peaks ENCSR863KUB ChIP-seq EFO:0002067 K562 cell line Homo sapiens TCF7-human ENCAB000ACR DNA False 2016-01-14 ENCODE 1, 2 ENCFF587PVQ, ENCFF742TAS 6926185 ENCODE Processing Pipeline f989a2624676b999e705716b76e3d2f5 https://www.encodeproject.org/files/ENCFF575VCO/@@download/ENCFF575VCO.bed.gz GRCh38 released borderline replicate concordance, low read depth, antibody characterized with exemption missing control alignments ENCFF490VXZ bigBed narrowPeak peaks ENCSR863KUB ChIP-seq EFO:0002067 K562 cell line Homo sapiens TCF7-human ENCAB000ACR DNA False 2016-01-14 ENCODE 2 ENCFF344EVG 11222833 ENCODE Processing Pipeline 4a6df3259383e49bfc03308460d275d8 https://www.encodeproject.org/files/ENCFF490VXZ/@@download/ENCFF490VXZ.bigBed GRCh38 released borderline replicate concordance, low read depth, antibody characterized with exemption missing control alignments ENCFF621JVC bed narrowPeak peaks ENCSR863KUB ChIP-seq EFO:0002067 K562 cell line Homo sapiens TCF7-human ENCAB000ACR DNA False 2016-01-14 ENCODE 1 ENCFF742TAS 6313460 ENCODE Processing Pipeline fef2a2cf175ee3d8a5aa91625c03603f https://www.encodeproject.org/files/ENCFF621JVC/@@download/ENCFF621JVC.bed.gz GRCh38 released borderline replicate concordance, low read depth, antibody characterized with exemption missing control alignments ENCFF344EVG bed narrowPeak peaks ENCSR863KUB ChIP-seq EFO:0002067 K562 cell line Homo sapiens TCF7-human ENCAB000ACR DNA False 2016-01-14 ENCODE 2 ENCFF587PVQ 5960377 ENCODE Processing Pipeline 37d635e74414b9544ba832e25e7c05bf https://www.encodeproject.org/files/ENCFF344EVG/@@download/ENCFF344EVG.bed.gz GRCh38 released borderline replicate concordance, low read depth, antibody characterized with exemption missing control alignments ENCFF083NMR bigBed narrowPeak peaks ENCSR863KUB ChIP-seq EFO:0002067 K562 cell line Homo sapiens TCF7-human ENCAB000ACR DNA False 2016-01-14 ENCODE 1 ENCFF621JVC 13405623 ENCODE Processing Pipeline b795a2d706a378f3f7427e57876df138 https://www.encodeproject.org/files/ENCFF083NMR/@@download/ENCFF083NMR.bigBed GRCh38 released borderline replicate concordance, low read depth, antibody characterized with exemption missing control alignments ENCFF357AHH bed narrowPeak conservative idr thresholded peaks ENCSR863KUB ChIP-seq EFO:0002067 K562 cell line Homo sapiens TCF7-human ENCAB000ACR DNA False 2016-01-14 ENCODE 1, 2 ENCFF344EVG, ENCFF419RSJ, ENCFF575VCO, ENCFF621JVC 94723 ENCODE Processing Pipeline f2d4205f963f9e65d6a05c437d088950 https://www.encodeproject.org/files/ENCFF357AHH/@@download/ENCFF357AHH.bed.gz GRCh38 released borderline replicate concordance, low read depth, antibody characterized with exemption missing control alignments ENCFF512IAI bed narrowPeak optimal idr thresholded peaks ENCSR863KUB ChIP-seq EFO:0002067 K562 cell line Homo sapiens TCF7-human ENCAB000ACR DNA False 2016-01-14 ENCODE 1, 2 ENCFF344EVG, ENCFF419RSJ, ENCFF575VCO, ENCFF621JVC 108529 ENCODE Processing Pipeline e33e20bf2dddde8658e603a7255dc012 https://www.encodeproject.org/files/ENCFF512IAI/@@download/ENCFF512IAI.bed.gz GRCh38 released borderline replicate concordance, low read depth, antibody characterized with exemption missing control alignments ENCFF213MTE bigBed narrowPeak conservative idr thresholded peaks ENCSR863KUB ChIP-seq EFO:0002067 K562 cell line Homo sapiens TCF7-human ENCAB000ACR DNA False 2016-01-14 ENCODE 1, 2 ENCFF357AHH 237864 ENCODE Processing Pipeline 196f62736b7483857236a228ec6e5628 https://www.encodeproject.org/files/ENCFF213MTE/@@download/ENCFF213MTE.bigBed GRCh38 released borderline replicate concordance, low read depth, antibody characterized with exemption missing control alignments ENCFF320ICM bigBed narrowPeak optimal idr thresholded peaks ENCSR863KUB ChIP-seq EFO:0002067 K562 cell line Homo sapiens TCF7-human ENCAB000ACR DNA False 2016-01-14 ENCODE 1, 2 ENCFF512IAI 258805 ENCODE Processing Pipeline 4c70731f70ba41eafbee379da6701472 https://www.encodeproject.org/files/ENCFF320ICM/@@download/ENCFF320ICM.bigBed GRCh38 released borderline replicate concordance, low read depth, antibody characterized with exemption missing control alignments ENCFF262SAL bam unfiltered alignments ENCSR863KUB ChIP-seq EFO:0002067 K562 cell line Homo sapiens TCF7-human ENCAB000ACR DNA False 2016-01-14 ENCODE 2 50 ENCFF807MUK, ENCFF959QTN 1431937004 ENCODE Processing Pipeline fb194f8702a078062f923f1c65aa7078 https://www.encodeproject.org/files/ENCFF262SAL/@@download/ENCFF262SAL.bam hg19 released borderline replicate concordance, low read depth, antibody characterized with exemption missing control alignments ENCFF344CZR bam unfiltered alignments ENCSR863KUB ChIP-seq EFO:0002067 K562 cell line Homo sapiens TCF7-human ENCAB000ACR DNA False 2016-01-14 ENCODE 1 50 ENCFF204JMO, ENCFF807MUK 2251395171 ENCODE Processing Pipeline 14d95680fe5c5dba396781a0631e1c88 https://www.encodeproject.org/files/ENCFF344CZR/@@download/ENCFF344CZR.bam hg19 released borderline replicate concordance, low read depth, antibody characterized with exemption missing control alignments ENCFF667OHN bigWig signal p-value ENCSR863KUB ChIP-seq EFO:0002067 K562 cell line Homo sapiens TCF7-human ENCAB000ACR DNA False 2016-01-14 ENCODE 1 ENCFF023YMB, ENCFF061QOJ, ENCFF862PIC 1132997520 ENCODE Processing Pipeline b964841134dd3499d1c6eef97956ba3e https://www.encodeproject.org/files/ENCFF667OHN/@@download/ENCFF667OHN.bigWig hg19 released borderline replicate concordance, low read depth, antibody characterized with exemption missing control alignments ENCFF127VYL bed narrowPeak peaks ENCSR863KUB ChIP-seq EFO:0002067 K562 cell line Homo sapiens TCF7-human ENCAB000ACR DNA False 2016-01-14 ENCODE 1, 2 ENCFF023YMB, ENCFF061QOJ, ENCFF862PIC, ENCFF946BKE 6960660 ENCODE Processing Pipeline 424c487b448113ec1d5a48e87875ff0e https://www.encodeproject.org/files/ENCFF127VYL/@@download/ENCFF127VYL.bed.gz hg19 released borderline replicate concordance, low read depth, antibody characterized with exemption missing control alignments ENCFF031KDI bigBed narrowPeak peaks ENCSR863KUB ChIP-seq EFO:0002067 K562 cell line Homo sapiens TCF7-human ENCAB000ACR DNA False 2016-01-14 ENCODE 1, 2 ENCFF127VYL 13330277 ENCODE Processing Pipeline a6719e97eebdef92dc7adc7410094b24 https://www.encodeproject.org/files/ENCFF031KDI/@@download/ENCFF031KDI.bigBed hg19 released borderline replicate concordance, low read depth, antibody characterized with exemption missing control alignments ENCFF620YDD bigWig fold change over control ENCSR863KUB ChIP-seq EFO:0002067 K562 cell line Homo sapiens TCF7-human ENCAB000ACR DNA False 2016-01-14 ENCODE 1 ENCFF023YMB, ENCFF061QOJ, ENCFF862PIC 863121876 ENCODE Processing Pipeline db7a5a497abb7ba3b794b4094afe8533 https://www.encodeproject.org/files/ENCFF620YDD/@@download/ENCFF620YDD.bigWig hg19 released borderline replicate concordance, low read depth, antibody characterized with exemption missing control alignments ENCFF206YXA bigWig signal p-value ENCSR863KUB ChIP-seq EFO:0002067 K562 cell line Homo sapiens TCF7-human ENCAB000ACR DNA False 2016-01-14 ENCODE 2 ENCFF023YMB, ENCFF061QOJ, ENCFF946BKE 1039092250 ENCODE Processing Pipeline 8944a9546d816a32529ac300532f0c66 https://www.encodeproject.org/files/ENCFF206YXA/@@download/ENCFF206YXA.bigWig hg19 released borderline replicate concordance, low read depth, antibody characterized with exemption missing control alignments ENCFF307AKP bigWig signal p-value ENCSR863KUB ChIP-seq EFO:0002067 K562 cell line Homo sapiens TCF7-human ENCAB000ACR DNA False 2016-01-14 ENCODE 1, 2 ENCFF023YMB, ENCFF061QOJ, ENCFF862PIC, ENCFF946BKE 1369292659 ENCODE Processing Pipeline afb4dee3188355c6d4cd12924c4583f9 https://www.encodeproject.org/files/ENCFF307AKP/@@download/ENCFF307AKP.bigWig hg19 released borderline replicate concordance, low read depth, antibody characterized with exemption missing control alignments ENCFF688MOC bigWig fold change over control ENCSR863KUB ChIP-seq EFO:0002067 K562 cell line Homo sapiens TCF7-human ENCAB000ACR DNA False 2016-01-14 ENCODE 2 ENCFF023YMB, ENCFF061QOJ, ENCFF946BKE 739882166 ENCODE Processing Pipeline 384e9e4f39faa589c2095b6dbdec9f91 https://www.encodeproject.org/files/ENCFF688MOC/@@download/ENCFF688MOC.bigWig hg19 released borderline replicate concordance, low read depth, antibody characterized with exemption missing control alignments ENCFF005PNR bigWig fold change over control ENCSR863KUB ChIP-seq EFO:0002067 K562 cell line Homo sapiens TCF7-human ENCAB000ACR DNA False 2016-01-14 ENCODE 1, 2 ENCFF023YMB, ENCFF061QOJ, ENCFF862PIC, ENCFF946BKE 1251035049 ENCODE Processing Pipeline 8489dea74ff5fc7d95975b74f9ea1203 https://www.encodeproject.org/files/ENCFF005PNR/@@download/ENCFF005PNR.bigWig hg19 released borderline replicate concordance, low read depth, antibody characterized with exemption missing control alignments ENCFF588ZYR bed narrowPeak peaks ENCSR863KUB ChIP-seq EFO:0002067 K562 cell line Homo sapiens TCF7-human ENCAB000ACR DNA False 2016-01-14 ENCODE 1 ENCFF023YMB, ENCFF061QOJ, ENCFF862PIC 6374559 ENCODE Processing Pipeline c33c3673740b566fbda54f4be7e1c3de https://www.encodeproject.org/files/ENCFF588ZYR/@@download/ENCFF588ZYR.bed.gz hg19 released borderline replicate concordance, low read depth, antibody characterized with exemption missing control alignments ENCFF086FEW bed narrowPeak peaks ENCSR863KUB ChIP-seq EFO:0002067 K562 cell line Homo sapiens TCF7-human ENCAB000ACR DNA False 2016-01-14 ENCODE 2 ENCFF023YMB, ENCFF061QOJ, ENCFF946BKE 5994594 ENCODE Processing Pipeline 1a05c82267f19e88a3885da5e35280e9 https://www.encodeproject.org/files/ENCFF086FEW/@@download/ENCFF086FEW.bed.gz hg19 released borderline replicate concordance, low read depth, antibody characterized with exemption missing control alignments ENCFF182AYX bigBed narrowPeak peaks ENCSR863KUB ChIP-seq EFO:0002067 K562 cell line Homo sapiens TCF7-human ENCAB000ACR DNA False 2016-01-14 ENCODE 1 ENCFF588ZYR 13407620 ENCODE Processing Pipeline 5bc76e5a2e1e269c91b0d74f2e954839 https://www.encodeproject.org/files/ENCFF182AYX/@@download/ENCFF182AYX.bigBed hg19 released borderline replicate concordance, low read depth, antibody characterized with exemption missing control alignments ENCFF387GNZ bigBed narrowPeak peaks ENCSR863KUB ChIP-seq EFO:0002067 K562 cell line Homo sapiens TCF7-human ENCAB000ACR DNA False 2016-01-14 ENCODE 2 ENCFF086FEW 13363241 ENCODE Processing Pipeline 1fbcd3bc6c731ed0af4ce6af15f94238 https://www.encodeproject.org/files/ENCFF387GNZ/@@download/ENCFF387GNZ.bigBed hg19 released borderline replicate concordance, low read depth, antibody characterized with exemption missing control alignments ENCFF850HGO bed narrowPeak conservative idr thresholded peaks ENCSR863KUB ChIP-seq EFO:0002067 K562 cell line Homo sapiens TCF7-human ENCAB000ACR DNA False 2016-01-14 ENCODE 1, 2 ENCFF001TDO, ENCFF086FEW, ENCFF127VYL, ENCFF588ZYR 93873 ENCODE Processing Pipeline d2895077f392374a42dbb1104cb96b8f https://www.encodeproject.org/files/ENCFF850HGO/@@download/ENCFF850HGO.bed.gz hg19 released borderline replicate concordance, low read depth, antibody characterized with exemption missing control alignments ENCFF948XAQ bigBed narrowPeak conservative idr thresholded peaks ENCSR863KUB ChIP-seq EFO:0002067 K562 cell line Homo sapiens TCF7-human ENCAB000ACR DNA False 2016-01-14 ENCODE 1, 2 ENCFF850HGO 235256 ENCODE Processing Pipeline 041b29dbaafe0a87a94e4cbea83fcad3 https://www.encodeproject.org/files/ENCFF948XAQ/@@download/ENCFF948XAQ.bigBed hg19 released borderline replicate concordance, low read depth, antibody characterized with exemption missing control alignments ENCFF249EZR bed narrowPeak optimal idr thresholded peaks ENCSR863KUB ChIP-seq EFO:0002067 K562 cell line Homo sapiens TCF7-human ENCAB000ACR DNA False 2016-01-14 ENCODE 1, 2 ENCFF001TDO, ENCFF086FEW, ENCFF127VYL, ENCFF588ZYR 107201 ENCODE Processing Pipeline e6d734cd2dddbdb65175f4aac5d619c6 https://www.encodeproject.org/files/ENCFF249EZR/@@download/ENCFF249EZR.bed.gz hg19 released borderline replicate concordance, low read depth, antibody characterized with exemption missing control alignments ENCFF629SVO bigBed narrowPeak optimal idr thresholded peaks ENCSR863KUB ChIP-seq EFO:0002067 K562 cell line Homo sapiens TCF7-human ENCAB000ACR DNA False 2016-01-14 ENCODE 1, 2 ENCFF249EZR 255311 ENCODE Processing Pipeline d9516d5534c39b09c44254327a3b3842 https://www.encodeproject.org/files/ENCFF629SVO/@@download/ENCFF629SVO.bigBed hg19 released borderline replicate concordance, low read depth, antibody characterized with exemption missing control alignments ENCFF526SSV fastq reads ENCSR657JLK ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIN3B-human ENCAB194LUB DNA False 2017-01-31 ENCODE 5 1 100 paired-ended 1 ENCFF953OIR 2016593006 Michael Snyder, Stanford 8072dbfa33db990f18028285d8484749 SRA:SRR6213501 https://www.encodeproject.org/files/ENCFF526SSV/@@download/ENCFF526SSV.fastq.gz Illumina HiSeq 4000 /files/ENCFF498JMO/ released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF953OIR fastq reads ENCSR657JLK ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIN3B-human ENCAB194LUB DNA False 2017-01-31 ENCODE 5 1 100 paired-ended 2 ENCFF526SSV 2398662672 Michael Snyder, Stanford f7b6d6b3e14811bc4b55c651cd9127e7 SRA:SRR6213501 https://www.encodeproject.org/files/ENCFF953OIR/@@download/ENCFF953OIR.fastq.gz Illumina HiSeq 4000 /files/ENCFF502GTS/ released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF044ZTQ fastq reads ENCSR657JLK ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIN3B-human ENCAB194LUB DNA False 2017-01-31 ENCODE 6 1 100 paired-ended 1 ENCFF119GEQ 1798621284 Michael Snyder, Stanford d7d8483f0202da630e6a4699fac27bbb SRA:SRR6213500 https://www.encodeproject.org/files/ENCFF044ZTQ/@@download/ENCFF044ZTQ.fastq.gz Illumina HiSeq 4000 /files/ENCFF259GQA/ released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF119GEQ fastq reads ENCSR657JLK ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIN3B-human ENCAB194LUB DNA False 2017-01-31 ENCODE 6 1 100 paired-ended 2 ENCFF044ZTQ 2235343342 Michael Snyder, Stanford a5ba4e5cd8529806c9a7d1bf685a34af SRA:SRR6213500 https://www.encodeproject.org/files/ENCFF119GEQ/@@download/ENCFF119GEQ.fastq.gz Illumina HiSeq 4000 /files/ENCFF837MIV/ released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF323OVV bam alignments ENCSR657JLK ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIN3B-human ENCAB194LUB DNA False 2017-01-31 ENCODE 5 100 ENCFF526SSV, ENCFF643CGH, ENCFF953OIR 1781653811 ENCODE Processing Pipeline ee373bbb6646a852e170c5966ad8e761 https://www.encodeproject.org/files/ENCFF323OVV/@@download/ENCFF323OVV.bam GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF046NKU bam unfiltered alignments ENCSR657JLK ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIN3B-human ENCAB194LUB DNA False 2017-01-31 ENCODE 5 100 ENCFF526SSV, ENCFF643CGH, ENCFF953OIR 3652893650 ENCODE Processing Pipeline c56bb22ed2977801ede40fd7c57167c7 https://www.encodeproject.org/files/ENCFF046NKU/@@download/ENCFF046NKU.bam GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF050VHP bam alignments ENCSR657JLK ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIN3B-human ENCAB194LUB DNA False 2017-01-31 ENCODE 6 100 ENCFF044ZTQ, ENCFF119GEQ, ENCFF643CGH 2013224462 ENCODE Processing Pipeline 5b3de0ed22cfced6f3bf837f0c7875f3 https://www.encodeproject.org/files/ENCFF050VHP/@@download/ENCFF050VHP.bam GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF348VWO bam unfiltered alignments ENCSR657JLK ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIN3B-human ENCAB194LUB DNA False 2017-01-31 ENCODE 6 100 ENCFF044ZTQ, ENCFF119GEQ, ENCFF643CGH 3473192040 ENCODE Processing Pipeline a8e5c0cc8334bc61428f0394143c85c1 https://www.encodeproject.org/files/ENCFF348VWO/@@download/ENCFF348VWO.bam GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF841BIG bigWig signal p-value ENCSR657JLK ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIN3B-human ENCAB194LUB DNA False 2017-01-31 ENCODE 6 ENCFF050VHP, ENCFF712WXB 994289291 ENCODE Processing Pipeline 051634c77b0953469576ec43df96599b https://www.encodeproject.org/files/ENCFF841BIG/@@download/ENCFF841BIG.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF300BUS bigWig fold change over control ENCSR657JLK ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIN3B-human ENCAB194LUB DNA False 2017-01-31 ENCODE 6 ENCFF050VHP, ENCFF712WXB 893983044 ENCODE Processing Pipeline a6a3e03d39263d00b3f1907e563a8533 https://www.encodeproject.org/files/ENCFF300BUS/@@download/ENCFF300BUS.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF266DPA bigWig fold change over control ENCSR657JLK ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIN3B-human ENCAB194LUB DNA False 2017-01-31 ENCODE 5, 6 ENCFF050VHP, ENCFF323OVV, ENCFF712WXB, ENCFF790TAN 1684420804 ENCODE Processing Pipeline c14451f7a0fe0135da44e72930203117 https://www.encodeproject.org/files/ENCFF266DPA/@@download/ENCFF266DPA.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF149RWE bed narrowPeak peaks ENCSR657JLK ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIN3B-human ENCAB194LUB DNA False 2017-01-31 ENCODE 6 ENCFF050VHP, ENCFF712WXB 6108809 ENCODE Processing Pipeline 6109305575c2038a9ac763bc2601ca60 https://www.encodeproject.org/files/ENCFF149RWE/@@download/ENCFF149RWE.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF934ERJ bigWig fold change over control ENCSR657JLK ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIN3B-human ENCAB194LUB DNA False 2017-01-31 ENCODE 5 ENCFF323OVV, ENCFF790TAN 821188570 ENCODE Processing Pipeline c2d6d102ab77b4a2e86924cf383301a4 https://www.encodeproject.org/files/ENCFF934ERJ/@@download/ENCFF934ERJ.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF704BJM bed narrowPeak peaks ENCSR657JLK ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIN3B-human ENCAB194LUB DNA False 2017-01-31 ENCODE 5, 6 ENCFF050VHP, ENCFF323OVV, ENCFF712WXB, ENCFF790TAN 6825762 ENCODE Processing Pipeline 60bd65ba180ed945738f9c9a301fbd09 https://www.encodeproject.org/files/ENCFF704BJM/@@download/ENCFF704BJM.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF578MGX bigBed narrowPeak peaks ENCSR657JLK ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIN3B-human ENCAB194LUB DNA False 2017-01-31 ENCODE 6 ENCFF149RWE 13275798 ENCODE Processing Pipeline f4be91113dd1c4a0d841ef33d20ea6c1 https://www.encodeproject.org/files/ENCFF578MGX/@@download/ENCFF578MGX.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF383UXK bigBed narrowPeak peaks ENCSR657JLK ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIN3B-human ENCAB194LUB DNA False 2017-01-31 ENCODE 5, 6 ENCFF704BJM 13384118 ENCODE Processing Pipeline da4c90245da26bfd23576cc84a488ada https://www.encodeproject.org/files/ENCFF383UXK/@@download/ENCFF383UXK.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF284MVH bigBed narrowPeak conservative idr thresholded peaks ENCSR657JLK ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIN3B-human ENCAB194LUB DNA False 2017-01-31 ENCODE 5, 6 ENCFF892JRL 322343 ENCODE Processing Pipeline e1243e6ebcffb13f4e81c98f7c29bc58 https://www.encodeproject.org/files/ENCFF284MVH/@@download/ENCFF284MVH.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF355GCP bigBed narrowPeak optimal idr thresholded peaks ENCSR657JLK ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIN3B-human ENCAB194LUB DNA False 2017-01-31 ENCODE 5, 6 ENCFF543INR 389811 ENCODE Processing Pipeline f325cda3094a1ba1e711e7bae69f1630 https://www.encodeproject.org/files/ENCFF355GCP/@@download/ENCFF355GCP.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF179STO bed narrowPeak peaks ENCSR657JLK ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIN3B-human ENCAB194LUB DNA False 2017-01-31 ENCODE 5 ENCFF323OVV, ENCFF790TAN 5345337 ENCODE Processing Pipeline 91f2d2ae76bd5a625dd9df8faedc3de1 https://www.encodeproject.org/files/ENCFF179STO/@@download/ENCFF179STO.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF664ZKQ bigBed narrowPeak peaks ENCSR657JLK ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIN3B-human ENCAB194LUB DNA False 2017-01-31 ENCODE 5 ENCFF179STO 11098764 ENCODE Processing Pipeline 278f8f1436fc3aba0bdc2f4f65eebfdc https://www.encodeproject.org/files/ENCFF664ZKQ/@@download/ENCFF664ZKQ.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF606XOK bigWig signal p-value ENCSR657JLK ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIN3B-human ENCAB194LUB DNA False 2017-01-31 ENCODE 5 ENCFF323OVV, ENCFF790TAN 850562121 ENCODE Processing Pipeline a26600ab9840c25c74b5dbc9b1f5fa2e https://www.encodeproject.org/files/ENCFF606XOK/@@download/ENCFF606XOK.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF494TLB bigWig signal p-value ENCSR657JLK ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIN3B-human ENCAB194LUB DNA False 2017-01-31 ENCODE 5, 6 ENCFF050VHP, ENCFF323OVV, ENCFF712WXB, ENCFF790TAN 1438410992 ENCODE Processing Pipeline 15786098f09bbd398ed4e748d743bd74 https://www.encodeproject.org/files/ENCFF494TLB/@@download/ENCFF494TLB.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF892JRL bed narrowPeak conservative idr thresholded peaks ENCSR657JLK ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIN3B-human ENCAB194LUB DNA False 2017-01-31 ENCODE 5, 6 ENCFF149RWE, ENCFF179STO, ENCFF419RSJ, ENCFF704BJM 140262 ENCODE Processing Pipeline f1edede9343904bb8493f30cd8856353 https://www.encodeproject.org/files/ENCFF892JRL/@@download/ENCFF892JRL.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF543INR bed narrowPeak optimal idr thresholded peaks ENCSR657JLK ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIN3B-human ENCAB194LUB DNA False 2017-01-31 ENCODE 5, 6 ENCFF149RWE, ENCFF179STO, ENCFF419RSJ, ENCFF704BJM 185965 ENCODE Processing Pipeline 0807855b6152ba7abf613dc780f4056b https://www.encodeproject.org/files/ENCFF543INR/@@download/ENCFF543INR.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF388BJW bam unfiltered alignments ENCSR657JLK ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIN3B-human ENCAB194LUB DNA False 2017-01-31 ENCODE 6 100 ENCFF044ZTQ, ENCFF119GEQ, ENCFF807MUK 3474044964 ENCODE Processing Pipeline 8b524722aa147ba42e52f0c282773a93 https://www.encodeproject.org/files/ENCFF388BJW/@@download/ENCFF388BJW.bam hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF714GLD bam unfiltered alignments ENCSR657JLK ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIN3B-human ENCAB194LUB DNA False 2017-01-31 ENCODE 5 100 ENCFF526SSV, ENCFF807MUK, ENCFF953OIR 3656826444 ENCODE Processing Pipeline 067a76f1bbe5bb04115cbc17b2e56694 https://www.encodeproject.org/files/ENCFF714GLD/@@download/ENCFF714GLD.bam hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF581FCG bam alignments ENCSR657JLK ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIN3B-human ENCAB194LUB DNA False 2017-01-31 ENCODE 6 100 ENCFF044ZTQ, ENCFF119GEQ, ENCFF807MUK 2012324178 ENCODE Processing Pipeline c97865a67a8c9195574c03877d5a3a11 https://www.encodeproject.org/files/ENCFF581FCG/@@download/ENCFF581FCG.bam hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF514PZW bam alignments ENCSR657JLK ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIN3B-human ENCAB194LUB DNA False 2017-01-31 ENCODE 5 100 ENCFF526SSV, ENCFF807MUK, ENCFF953OIR 1781225085 ENCODE Processing Pipeline bbe8c615efc2faa725f6a9a64d2b1367 https://www.encodeproject.org/files/ENCFF514PZW/@@download/ENCFF514PZW.bam hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF459SUD bigWig signal p-value ENCSR657JLK ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIN3B-human ENCAB194LUB DNA False 2017-01-31 ENCODE 6 ENCFF581FCG, ENCFF834TUP 976611443 ENCODE Processing Pipeline 49715d90ff3ccac5c74a6f9a3de0f867 https://www.encodeproject.org/files/ENCFF459SUD/@@download/ENCFF459SUD.bigWig hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF004IKJ bed narrowPeak conservative idr thresholded peaks ENCSR657JLK ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIN3B-human ENCAB194LUB DNA False 2017-01-31 ENCODE 5, 6 ENCFF001TDO, ENCFF197DMK, ENCFF251WTS, ENCFF901YWM 138381 ENCODE Processing Pipeline fa45d1dec52953777e82144dfba0cb63 https://www.encodeproject.org/files/ENCFF004IKJ/@@download/ENCFF004IKJ.bed.gz hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF549RTD bigWig signal p-value ENCSR657JLK ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIN3B-human ENCAB194LUB DNA False 2017-01-31 ENCODE 5 ENCFF160VXC, ENCFF514PZW 864644218 ENCODE Processing Pipeline 182b23974dc1599d620383278635e767 https://www.encodeproject.org/files/ENCFF549RTD/@@download/ENCFF549RTD.bigWig hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF900JVT bigWig signal p-value ENCSR657JLK ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIN3B-human ENCAB194LUB DNA False 2017-01-31 ENCODE 5, 6 ENCFF160VXC, ENCFF514PZW, ENCFF581FCG, ENCFF834TUP 1682007451 ENCODE Processing Pipeline 0491dee9f8a6c2ff202504258497a329 https://www.encodeproject.org/files/ENCFF900JVT/@@download/ENCFF900JVT.bigWig hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF179LCW bigWig fold change over control ENCSR657JLK ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIN3B-human ENCAB194LUB DNA False 2017-01-31 ENCODE 5 ENCFF160VXC, ENCFF514PZW 821891833 ENCODE Processing Pipeline 38be5f44efc6be5a355bd91e9a279573 https://www.encodeproject.org/files/ENCFF179LCW/@@download/ENCFF179LCW.bigWig hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF659MUO bigWig fold change over control ENCSR657JLK ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIN3B-human ENCAB194LUB DNA False 2017-01-31 ENCODE 6 ENCFF581FCG, ENCFF834TUP 892461775 ENCODE Processing Pipeline 37b76e271a401ae152345044c6a93af1 https://www.encodeproject.org/files/ENCFF659MUO/@@download/ENCFF659MUO.bigWig hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF036PQP bigWig fold change over control ENCSR657JLK ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIN3B-human ENCAB194LUB DNA False 2017-01-31 ENCODE 5, 6 ENCFF160VXC, ENCFF514PZW, ENCFF581FCG, ENCFF834TUP 1680857476 ENCODE Processing Pipeline 59d2c4f9466c9c16d59a03eea2924049 https://www.encodeproject.org/files/ENCFF036PQP/@@download/ENCFF036PQP.bigWig hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF901YWM bed narrowPeak peaks ENCSR657JLK ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIN3B-human ENCAB194LUB DNA False 2017-01-31 ENCODE 5 ENCFF160VXC, ENCFF514PZW 5344856 ENCODE Processing Pipeline 113821c7722aea3564c1cdcf523ba6b4 https://www.encodeproject.org/files/ENCFF901YWM/@@download/ENCFF901YWM.bed.gz hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF251WTS bed narrowPeak peaks ENCSR657JLK ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIN3B-human ENCAB194LUB DNA False 2017-01-31 ENCODE 6 ENCFF581FCG, ENCFF834TUP 6169947 ENCODE Processing Pipeline 6957338f2ef6045cc9d16ab633b71c0b https://www.encodeproject.org/files/ENCFF251WTS/@@download/ENCFF251WTS.bed.gz hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF197DMK bed narrowPeak peaks ENCSR657JLK ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIN3B-human ENCAB194LUB DNA False 2017-01-31 ENCODE 5, 6 ENCFF160VXC, ENCFF514PZW, ENCFF581FCG, ENCFF834TUP 6822837 ENCODE Processing Pipeline 04d9d6ab389f32c6f14fc731e5b9d0e3 https://www.encodeproject.org/files/ENCFF197DMK/@@download/ENCFF197DMK.bed.gz hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF941RWS bigBed narrowPeak peaks ENCSR657JLK ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIN3B-human ENCAB194LUB DNA False 2017-01-31 ENCODE 5 ENCFF901YWM 11081624 ENCODE Processing Pipeline 99fec5212850b08710725cd8b7c780dd https://www.encodeproject.org/files/ENCFF941RWS/@@download/ENCFF941RWS.bigBed hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF705HIP bigBed narrowPeak peaks ENCSR657JLK ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIN3B-human ENCAB194LUB DNA False 2017-01-31 ENCODE 6 ENCFF251WTS 13264012 ENCODE Processing Pipeline 39d1530466bd4b1827c7dd569a1c6679 https://www.encodeproject.org/files/ENCFF705HIP/@@download/ENCFF705HIP.bigBed hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF940SRZ bigBed narrowPeak peaks ENCSR657JLK ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIN3B-human ENCAB194LUB DNA False 2017-01-31 ENCODE 5, 6 ENCFF197DMK 13368186 ENCODE Processing Pipeline 053a602a107576376a0e97b1f3447d37 https://www.encodeproject.org/files/ENCFF940SRZ/@@download/ENCFF940SRZ.bigBed hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF658OPS bigBed narrowPeak conservative idr thresholded peaks ENCSR657JLK ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIN3B-human ENCAB194LUB DNA False 2017-01-31 ENCODE 5, 6 ENCFF004IKJ 318663 ENCODE Processing Pipeline d5d9ba75e6a44e9cf500ff68918cbd68 https://www.encodeproject.org/files/ENCFF658OPS/@@download/ENCFF658OPS.bigBed hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF280GTU bed narrowPeak optimal idr thresholded peaks ENCSR657JLK ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIN3B-human ENCAB194LUB DNA False 2017-01-31 ENCODE 5, 6 ENCFF001TDO, ENCFF197DMK, ENCFF251WTS, ENCFF901YWM 190738 ENCODE Processing Pipeline d3745e7133f56987c46493d8e6d4c989 https://www.encodeproject.org/files/ENCFF280GTU/@@download/ENCFF280GTU.bed.gz hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF105LAG bigBed narrowPeak optimal idr thresholded peaks ENCSR657JLK ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIN3B-human ENCAB194LUB DNA False 2017-01-31 ENCODE 5, 6 ENCFF280GTU 394596 ENCODE Processing Pipeline 826835c3b66bcf8bc1904fca86f991df https://www.encodeproject.org/files/ENCFF105LAG/@@download/ENCFF105LAG.bigBed hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF838JGE bam unfiltered alignments ENCSR038DJJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMAD1-human ENCAB000AYH DNA False 2014-07-07 ENCODE 1 36 ENCFF002EBF, ENCFF807MUK 1227527483 ENCODE Processing Pipeline 964a7f91db0ebba212707934c8bf6b71 https://www.encodeproject.org/files/ENCFF838JGE/@@download/ENCFF838JGE.bam hg19 released low read depth, low read length experiment not submitted to GEO partially characterized antibody ENCFF847QOA bam unfiltered alignments ENCSR038DJJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMAD1-human ENCAB000AYH DNA False 2014-07-07 ENCODE 2 36 ENCFF002EBM, ENCFF807MUK 1128168732 ENCODE Processing Pipeline 372751e188c7ddd7d08655956e1b27d8 https://www.encodeproject.org/files/ENCFF847QOA/@@download/ENCFF847QOA.bam hg19 released low read depth, low read length experiment not submitted to GEO partially characterized antibody ENCFF002EBF fastq reads ENCSR038DJJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMAD1-human ENCAB000AYH DNA False 2014-07-07 ENCODE 1 1 36 single-ended 858011979 Michael Snyder, Stanford 11eafb3399ea128bd4a363f0b4d61089 https://www.encodeproject.org/files/ENCFF002EBF/@@download/ENCFF002EBF.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF002ECW/ released low read depth, low read length experiment not submitted to GEO partially characterized antibody ENCFF002EBM fastq reads ENCSR038DJJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMAD1-human ENCAB000AYH DNA False 2014-07-07 ENCODE 2 1 36 single-ended 776434783 Michael Snyder, Stanford 18e65d00d4d2040af856f19257ae349f https://www.encodeproject.org/files/ENCFF002EBM/@@download/ENCFF002EBM.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF002ECS/ released low read depth, low read length experiment not submitted to GEO partially characterized antibody ENCFF589BQJ bam alignments ENCSR038DJJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMAD1-human ENCAB000AYH DNA False 2014-07-07 ENCODE 1 36 ENCFF002EBF, ENCFF807MUK 825488894 ENCODE Processing Pipeline 91280fd034e5aa558ff0569266920de5 https://www.encodeproject.org/files/ENCFF589BQJ/@@download/ENCFF589BQJ.bam hg19 released low read depth, low read length experiment not submitted to GEO partially characterized antibody ENCFF509WOE bam alignments ENCSR038DJJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMAD1-human ENCAB000AYH DNA False 2014-07-07 ENCODE 2 36 ENCFF002EBM, ENCFF807MUK 746119387 ENCODE Processing Pipeline 5e2f4ecc2bea12793448debeac34c6ad https://www.encodeproject.org/files/ENCFF509WOE/@@download/ENCFF509WOE.bam hg19 released low read depth, low read length experiment not submitted to GEO partially characterized antibody ENCFF302YXA bigWig signal p-value ENCSR038DJJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMAD1-human ENCAB000AYH DNA False 2014-07-07 ENCODE 2 ENCFF509WOE, ENCFF879OQC 552404521 ENCODE Processing Pipeline 7f395c5409a36bc4b700a2c24fcaca37 https://www.encodeproject.org/files/ENCFF302YXA/@@download/ENCFF302YXA.bigWig hg19 released low read depth, low read length experiment not submitted to GEO partially characterized antibody ENCFF477CPI bigWig fold change over control ENCSR038DJJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMAD1-human ENCAB000AYH DNA False 2014-07-07 ENCODE 2 ENCFF509WOE, ENCFF879OQC 425696409 ENCODE Processing Pipeline 439fb20716b01a1092bbbec28e12518a https://www.encodeproject.org/files/ENCFF477CPI/@@download/ENCFF477CPI.bigWig hg19 released low read depth, low read length experiment not submitted to GEO partially characterized antibody ENCFF120SAO bam unfiltered alignments ENCSR038DJJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMAD1-human ENCAB000AYH DNA False 2014-07-07 ENCODE 1 36 ENCFF002EBF, ENCFF643CGH 1233091879 ENCODE Processing Pipeline ed371b369b54ee3de63cee025bdd3ee2 https://www.encodeproject.org/files/ENCFF120SAO/@@download/ENCFF120SAO.bam GRCh38 released low read depth, low read length experiment not submitted to GEO partially characterized antibody ENCFF750NWO bam unfiltered alignments ENCSR038DJJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMAD1-human ENCAB000AYH DNA False 2014-07-07 ENCODE 2 36 ENCFF002EBM, ENCFF643CGH 1133281745 ENCODE Processing Pipeline 6d48763f280a6806dd949fdf4c21471c https://www.encodeproject.org/files/ENCFF750NWO/@@download/ENCFF750NWO.bam GRCh38 released low read depth, low read length experiment not submitted to GEO partially characterized antibody ENCFF098FBI bam alignments ENCSR038DJJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMAD1-human ENCAB000AYH DNA False 2014-07-07 ENCODE 2 36 ENCFF002EBM, ENCFF643CGH 745621246 ENCODE Processing Pipeline 634c1e7eacce6a6242013a57e06d1571 https://www.encodeproject.org/files/ENCFF098FBI/@@download/ENCFF098FBI.bam GRCh38 released low read depth, low read length experiment not submitted to GEO partially characterized antibody ENCFF720GSG bam alignments ENCSR038DJJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMAD1-human ENCAB000AYH DNA False 2014-07-07 ENCODE 1 36 ENCFF002EBF, ENCFF643CGH 824899062 ENCODE Processing Pipeline 36592d05149ae4dcf74f8c12200d00fb https://www.encodeproject.org/files/ENCFF720GSG/@@download/ENCFF720GSG.bam GRCh38 released low read depth, low read length experiment not submitted to GEO partially characterized antibody ENCFF361TAB bigWig signal p-value ENCSR038DJJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMAD1-human ENCAB000AYH DNA False 2014-07-07 ENCODE 1 ENCFF156FED, ENCFF720GSG 469719422 ENCODE Processing Pipeline 649548ed7ff9ec39f82c6cc278436f7a https://www.encodeproject.org/files/ENCFF361TAB/@@download/ENCFF361TAB.bigWig GRCh38 released low read depth, low read length experiment not submitted to GEO partially characterized antibody ENCFF114CDP bigWig signal p-value ENCSR038DJJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMAD1-human ENCAB000AYH DNA False 2014-07-07 ENCODE 2 ENCFF098FBI, ENCFF577FNG 508636132 ENCODE Processing Pipeline e49557b7974efeb6764adc7c388dd242 https://www.encodeproject.org/files/ENCFF114CDP/@@download/ENCFF114CDP.bigWig GRCh38 released low read depth, low read length experiment not submitted to GEO partially characterized antibody ENCFF281FEJ bigWig signal p-value ENCSR038DJJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMAD1-human ENCAB000AYH DNA False 2014-07-07 ENCODE 1, 2 ENCFF098FBI, ENCFF156FED, ENCFF577FNG, ENCFF720GSG 976571231 ENCODE Processing Pipeline 194646c0e538441f3c50867f504b040a https://www.encodeproject.org/files/ENCFF281FEJ/@@download/ENCFF281FEJ.bigWig GRCh38 released low read depth, low read length experiment not submitted to GEO partially characterized antibody ENCFF662RUC bigWig fold change over control ENCSR038DJJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMAD1-human ENCAB000AYH DNA False 2014-07-07 ENCODE 1 ENCFF156FED, ENCFF720GSG 456739790 ENCODE Processing Pipeline a20c1b8a275386c3b0cb8b940fc7152a https://www.encodeproject.org/files/ENCFF662RUC/@@download/ENCFF662RUC.bigWig GRCh38 released low read depth, low read length experiment not submitted to GEO partially characterized antibody ENCFF301LGK bigWig fold change over control ENCSR038DJJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMAD1-human ENCAB000AYH DNA False 2014-07-07 ENCODE 2 ENCFF098FBI, ENCFF577FNG 427565658 ENCODE Processing Pipeline 71ef1626faf9bdc6f0ec88a200e19a27 https://www.encodeproject.org/files/ENCFF301LGK/@@download/ENCFF301LGK.bigWig GRCh38 released low read depth, low read length experiment not submitted to GEO partially characterized antibody ENCFF847VYT bigWig fold change over control ENCSR038DJJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMAD1-human ENCAB000AYH DNA False 2014-07-07 ENCODE 1, 2 ENCFF098FBI, ENCFF156FED, ENCFF577FNG, ENCFF720GSG 976776270 ENCODE Processing Pipeline b6c3d493e806fc0c1ceae7fa12bca108 https://www.encodeproject.org/files/ENCFF847VYT/@@download/ENCFF847VYT.bigWig GRCh38 released low read depth, low read length experiment not submitted to GEO partially characterized antibody ENCFF203IZG bed narrowPeak peaks ENCSR038DJJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMAD1-human ENCAB000AYH DNA False 2014-07-07 ENCODE 1 ENCFF156FED, ENCFF720GSG 4858632 ENCODE Processing Pipeline 30ee2cd134df0818f98c26123c3e8aa4 https://www.encodeproject.org/files/ENCFF203IZG/@@download/ENCFF203IZG.bed.gz GRCh38 released low read depth, low read length experiment not submitted to GEO partially characterized antibody ENCFF563HRQ bed narrowPeak peaks ENCSR038DJJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMAD1-human ENCAB000AYH DNA False 2014-07-07 ENCODE 1, 2 ENCFF098FBI, ENCFF156FED, ENCFF577FNG, ENCFF720GSG 6487051 ENCODE Processing Pipeline b27a2fd39211f8da7a6a39f6d249d22d https://www.encodeproject.org/files/ENCFF563HRQ/@@download/ENCFF563HRQ.bed.gz GRCh38 released low read depth, low read length experiment not submitted to GEO partially characterized antibody ENCFF608MIU bigBed narrowPeak peaks ENCSR038DJJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMAD1-human ENCAB000AYH DNA False 2014-07-07 ENCODE 1 ENCFF203IZG 10951220 ENCODE Processing Pipeline 24e4480841a8d9ff0b8814de459ab303 https://www.encodeproject.org/files/ENCFF608MIU/@@download/ENCFF608MIU.bigBed GRCh38 released low read depth, low read length experiment not submitted to GEO partially characterized antibody ENCFF141FCD bigBed narrowPeak conservative idr thresholded peaks ENCSR038DJJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMAD1-human ENCAB000AYH DNA False 2014-07-07 ENCODE 1, 2 ENCFF012KDB 289742 ENCODE Processing Pipeline b72d0d8c0212addd9dcd04254afcb8e3 https://www.encodeproject.org/files/ENCFF141FCD/@@download/ENCFF141FCD.bigBed GRCh38 released low read depth, low read length experiment not submitted to GEO partially characterized antibody ENCFF378JOP bed narrowPeak peaks ENCSR038DJJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMAD1-human ENCAB000AYH DNA False 2014-07-07 ENCODE 2 ENCFF098FBI, ENCFF577FNG 5164808 ENCODE Processing Pipeline d801f1cf9185c00a1f9f2a3a57990e29 https://www.encodeproject.org/files/ENCFF378JOP/@@download/ENCFF378JOP.bed.gz GRCh38 released low read depth, low read length experiment not submitted to GEO partially characterized antibody ENCFF433GTV bigBed narrowPeak peaks ENCSR038DJJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMAD1-human ENCAB000AYH DNA False 2014-07-07 ENCODE 2 ENCFF378JOP 10977574 ENCODE Processing Pipeline b101506645ada98369f36867985c74e2 https://www.encodeproject.org/files/ENCFF433GTV/@@download/ENCFF433GTV.bigBed GRCh38 released low read depth, low read length experiment not submitted to GEO partially characterized antibody ENCFF129ZYO bigBed narrowPeak peaks ENCSR038DJJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMAD1-human ENCAB000AYH DNA False 2014-07-07 ENCODE 1, 2 ENCFF563HRQ 13346565 ENCODE Processing Pipeline 96f0152bb12cc547fae8d150dba9087d https://www.encodeproject.org/files/ENCFF129ZYO/@@download/ENCFF129ZYO.bigBed GRCh38 released low read depth, low read length experiment not submitted to GEO partially characterized antibody ENCFF084BUP bed narrowPeak optimal idr thresholded peaks ENCSR038DJJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMAD1-human ENCAB000AYH DNA False 2014-07-07 ENCODE 1, 2 ENCFF203IZG, ENCFF378JOP, ENCFF419RSJ, ENCFF563HRQ 161589 ENCODE Processing Pipeline fd1b4333e0049b41fe0deec2b3de53df https://www.encodeproject.org/files/ENCFF084BUP/@@download/ENCFF084BUP.bed.gz GRCh38 released low read depth, low read length experiment not submitted to GEO partially characterized antibody ENCFF012KDB bed narrowPeak conservative idr thresholded peaks ENCSR038DJJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMAD1-human ENCAB000AYH DNA False 2014-07-07 ENCODE 1, 2 ENCFF203IZG, ENCFF378JOP, ENCFF419RSJ, ENCFF563HRQ 130911 ENCODE Processing Pipeline 2785b111587f478842a28882a47655b6 https://www.encodeproject.org/files/ENCFF012KDB/@@download/ENCFF012KDB.bed.gz GRCh38 released low read depth, low read length experiment not submitted to GEO partially characterized antibody ENCFF717ROA bigBed narrowPeak optimal idr thresholded peaks ENCSR038DJJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMAD1-human ENCAB000AYH DNA False 2014-07-07 ENCODE 1, 2 ENCFF084BUP 335535 ENCODE Processing Pipeline 5b809bea45b8ca2ebece1a02e3c3aa11 https://www.encodeproject.org/files/ENCFF717ROA/@@download/ENCFF717ROA.bigBed GRCh38 released low read depth, low read length experiment not submitted to GEO partially characterized antibody ENCFF403QVA bigWig signal p-value ENCSR038DJJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMAD1-human ENCAB000AYH DNA False 2014-07-07 ENCODE 1 ENCFF335IPE, ENCFF589BQJ 577387772 ENCODE Processing Pipeline 2b4e67a06c62bf1bbff6368a029fe713 https://www.encodeproject.org/files/ENCFF403QVA/@@download/ENCFF403QVA.bigWig hg19 released low read depth, low read length experiment not submitted to GEO partially characterized antibody ENCFF902SVT bigWig fold change over control ENCSR038DJJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMAD1-human ENCAB000AYH DNA False 2014-07-07 ENCODE 1 ENCFF335IPE, ENCFF589BQJ 451184413 ENCODE Processing Pipeline dda341338605327d70b24398e405df7e https://www.encodeproject.org/files/ENCFF902SVT/@@download/ENCFF902SVT.bigWig hg19 released low read depth, low read length experiment not submitted to GEO partially characterized antibody ENCFF360CIL bigWig signal p-value ENCSR038DJJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMAD1-human ENCAB000AYH DNA False 2014-07-07 ENCODE 1, 2 ENCFF335IPE, ENCFF509WOE, ENCFF589BQJ, ENCFF879OQC 1025571704 ENCODE Processing Pipeline b35a8c7e19f3d89a709246efa41fe032 https://www.encodeproject.org/files/ENCFF360CIL/@@download/ENCFF360CIL.bigWig hg19 released low read depth, low read length experiment not submitted to GEO partially characterized antibody ENCFF434JPE bigWig fold change over control ENCSR038DJJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMAD1-human ENCAB000AYH DNA False 2014-07-07 ENCODE 1, 2 ENCFF335IPE, ENCFF509WOE, ENCFF589BQJ, ENCFF879OQC 927943709 ENCODE Processing Pipeline cd6e23c3906b6efa918c7d7c62bde388 https://www.encodeproject.org/files/ENCFF434JPE/@@download/ENCFF434JPE.bigWig hg19 released low read depth, low read length experiment not submitted to GEO partially characterized antibody ENCFF328DUA bed narrowPeak peaks ENCSR038DJJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMAD1-human ENCAB000AYH DNA False 2014-07-07 ENCODE 2 ENCFF509WOE, ENCFF879OQC 5231189 ENCODE Processing Pipeline 85f53ffb30f6faf16fe0caa5e9b060c9 https://www.encodeproject.org/files/ENCFF328DUA/@@download/ENCFF328DUA.bed.gz hg19 released low read depth, low read length experiment not submitted to GEO partially characterized antibody ENCFF567MRG bed narrowPeak peaks ENCSR038DJJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMAD1-human ENCAB000AYH DNA False 2014-07-07 ENCODE 1, 2 ENCFF335IPE, ENCFF509WOE, ENCFF589BQJ, ENCFF879OQC 6495277 ENCODE Processing Pipeline 59919b41a010411d81de09be1a21bb21 https://www.encodeproject.org/files/ENCFF567MRG/@@download/ENCFF567MRG.bed.gz hg19 released low read depth, low read length experiment not submitted to GEO partially characterized antibody ENCFF067UPX bed narrowPeak peaks ENCSR038DJJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMAD1-human ENCAB000AYH DNA False 2014-07-07 ENCODE 1 ENCFF335IPE, ENCFF589BQJ 4686830 ENCODE Processing Pipeline 953df01f5694db5b646bd916b71b2a69 https://www.encodeproject.org/files/ENCFF067UPX/@@download/ENCFF067UPX.bed.gz hg19 released low read depth, low read length experiment not submitted to GEO partially characterized antibody ENCFF338DEO bigBed narrowPeak peaks ENCSR038DJJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMAD1-human ENCAB000AYH DNA False 2014-07-07 ENCODE 1 ENCFF067UPX 10795431 ENCODE Processing Pipeline 78144ea56523732569d6bec778dd0723 https://www.encodeproject.org/files/ENCFF338DEO/@@download/ENCFF338DEO.bigBed hg19 released low read depth, low read length experiment not submitted to GEO partially characterized antibody ENCFF978BSV bigBed narrowPeak peaks ENCSR038DJJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMAD1-human ENCAB000AYH DNA False 2014-07-07 ENCODE 2 ENCFF328DUA 10982171 ENCODE Processing Pipeline 078b2114c261f1065119ae3c764d5621 https://www.encodeproject.org/files/ENCFF978BSV/@@download/ENCFF978BSV.bigBed hg19 released low read depth, low read length experiment not submitted to GEO partially characterized antibody ENCFF827XLG bigBed narrowPeak peaks ENCSR038DJJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMAD1-human ENCAB000AYH DNA False 2014-07-07 ENCODE 1, 2 ENCFF567MRG 13338823 ENCODE Processing Pipeline 3dc25f90bfd6c12dda9c0c704108fd89 https://www.encodeproject.org/files/ENCFF827XLG/@@download/ENCFF827XLG.bigBed hg19 released low read depth, low read length experiment not submitted to GEO partially characterized antibody ENCFF388JWW bed narrowPeak conservative idr thresholded peaks ENCSR038DJJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMAD1-human ENCAB000AYH DNA False 2014-07-07 ENCODE 1, 2 ENCFF001TDO, ENCFF067UPX, ENCFF328DUA, ENCFF567MRG 134908 ENCODE Processing Pipeline 61a1306f21c856ee58d7c07ddfa403ec https://www.encodeproject.org/files/ENCFF388JWW/@@download/ENCFF388JWW.bed.gz hg19 released low read depth, low read length experiment not submitted to GEO partially characterized antibody ENCFF394ROW bigBed narrowPeak conservative idr thresholded peaks ENCSR038DJJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMAD1-human ENCAB000AYH DNA False 2014-07-07 ENCODE 1, 2 ENCFF388JWW 293775 ENCODE Processing Pipeline afb896bece6f9a31338c516a69e042ca https://www.encodeproject.org/files/ENCFF394ROW/@@download/ENCFF394ROW.bigBed hg19 released low read depth, low read length experiment not submitted to GEO partially characterized antibody ENCFF208TTI bigBed narrowPeak optimal idr thresholded peaks ENCSR038DJJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMAD1-human ENCAB000AYH DNA False 2014-07-07 ENCODE 1, 2 ENCFF315YAF 335391 ENCODE Processing Pipeline 1aa196599732176723111821b9b405c3 https://www.encodeproject.org/files/ENCFF208TTI/@@download/ENCFF208TTI.bigBed hg19 released low read depth, low read length experiment not submitted to GEO partially characterized antibody ENCFF315YAF bed narrowPeak optimal idr thresholded peaks ENCSR038DJJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMAD1-human ENCAB000AYH DNA False 2014-07-07 ENCODE 1, 2 ENCFF001TDO, ENCFF067UPX, ENCFF328DUA, ENCFF567MRG 163107 ENCODE Processing Pipeline 00df6f6748c20e2ecc98bc3d078b2bd2 https://www.encodeproject.org/files/ENCFF315YAF/@@download/ENCFF315YAF.bed.gz hg19 released low read depth, low read length experiment not submitted to GEO partially characterized antibody ENCFF825BIK bam unfiltered alignments ENCSR389PWB ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB5-human ENCAB473PPK DNA False 2018-01-26 ENCODE 1 100 ENCFF428KVQ, ENCFF807MUK, ENCFF845NIC 6041923995 ENCODE Processing Pipeline 18d93498d3c305bc6e6165ffc1aad561 https://www.encodeproject.org/files/ENCFF825BIK/@@download/ENCFF825BIK.bam hg19 released experiment not submitted to GEO partially characterized antibody ENCFF772YZU bam unfiltered alignments ENCSR389PWB ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB5-human ENCAB473PPK DNA False 2018-01-26 ENCODE 2 100 ENCFF637DCS, ENCFF807MUK, ENCFF813FAX 5397575007 ENCODE Processing Pipeline 757bc5ce2e1dedf13bbbb107917d9ec7 https://www.encodeproject.org/files/ENCFF772YZU/@@download/ENCFF772YZU.bam hg19 released experiment not submitted to GEO partially characterized antibody ENCFF637DCS fastq reads ENCSR389PWB ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB5-human ENCAB473PPK DNA False 2018-01-26 ENCODE 2 1 100 paired-ended 2 ENCFF813FAX 2451271259 Michael Snyder, Stanford 6493c7d3a347c12bd1820017568759ea https://www.encodeproject.org/files/ENCFF637DCS/@@download/ENCFF637DCS.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFA/ released experiment not submitted to GEO partially characterized antibody ENCFF845NIC fastq reads ENCSR389PWB ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB5-human ENCAB473PPK DNA False 2018-01-26 ENCODE 1 1 100 paired-ended 1 ENCFF428KVQ 2733932953 Michael Snyder, Stanford fff27a29a8cb16ddd8b6c05c9d0d45f6 https://www.encodeproject.org/files/ENCFF845NIC/@@download/ENCFF845NIC.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFF/ released experiment not submitted to GEO partially characterized antibody ENCFF428KVQ fastq reads ENCSR389PWB ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB5-human ENCAB473PPK DNA False 2018-01-26 ENCODE 1 1 100 paired-ended 2 ENCFF845NIC 2774637020 Michael Snyder, Stanford 67274a212ea517c15e6c7423d2f56880 https://www.encodeproject.org/files/ENCFF428KVQ/@@download/ENCFF428KVQ.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFH/ released experiment not submitted to GEO partially characterized antibody ENCFF813FAX fastq reads ENCSR389PWB ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB5-human ENCAB473PPK DNA False 2018-01-26 ENCODE 2 1 100 paired-ended 1 ENCFF637DCS 2421090600 Michael Snyder, Stanford 2ab49ac46ddafacdd940d7b05bb114a4 https://www.encodeproject.org/files/ENCFF813FAX/@@download/ENCFF813FAX.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFD/ released experiment not submitted to GEO partially characterized antibody ENCFF986MVN bam alignments ENCSR389PWB ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB5-human ENCAB473PPK DNA False 2018-01-26 ENCODE 1 ENCFF428KVQ, ENCFF807MUK, ENCFF845NIC 5283453352 ENCODE Processing Pipeline 954eede4f0093e7192ea07c119f8648b https://www.encodeproject.org/files/ENCFF986MVN/@@download/ENCFF986MVN.bam hg19 released experiment not submitted to GEO partially characterized antibody ENCFF081SMO bam alignments ENCSR389PWB ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB5-human ENCAB473PPK DNA False 2018-01-26 ENCODE 2 ENCFF637DCS, ENCFF807MUK, ENCFF813FAX 4671984014 ENCODE Processing Pipeline 850de43f2c033de40dd44d5f0d1e7cd7 https://www.encodeproject.org/files/ENCFF081SMO/@@download/ENCFF081SMO.bam hg19 released experiment not submitted to GEO partially characterized antibody ENCFF971FVW bigWig signal p-value ENCSR389PWB ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB5-human ENCAB473PPK DNA False 2018-01-26 ENCODE 1 ENCFF581ZJL, ENCFF986MVN 1320986804 ENCODE Processing Pipeline e0b45f4879ab88725e1c51e18cb25701 https://www.encodeproject.org/files/ENCFF971FVW/@@download/ENCFF971FVW.bigWig hg19 released experiment not submitted to GEO partially characterized antibody ENCFF882BOJ bigWig fold change over control ENCSR389PWB ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB5-human ENCAB473PPK DNA False 2018-01-26 ENCODE 1 ENCFF581ZJL, ENCFF986MVN 1331953328 ENCODE Processing Pipeline caf54a5a0bec35e496631a280079ea6e https://www.encodeproject.org/files/ENCFF882BOJ/@@download/ENCFF882BOJ.bigWig hg19 released experiment not submitted to GEO partially characterized antibody ENCFF489VNZ bigWig signal p-value ENCSR389PWB ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB5-human ENCAB473PPK DNA False 2018-01-26 ENCODE 2 ENCFF051LWI, ENCFF081SMO 1085253030 ENCODE Processing Pipeline 30c99ab7e4cba575d7cdb39b3b0aa7b1 https://www.encodeproject.org/files/ENCFF489VNZ/@@download/ENCFF489VNZ.bigWig hg19 released experiment not submitted to GEO partially characterized antibody ENCFF141GEQ bigWig signal p-value ENCSR389PWB ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB5-human ENCAB473PPK DNA False 2018-01-26 ENCODE 1, 2 ENCFF051LWI, ENCFF081SMO, ENCFF581ZJL, ENCFF986MVN 1906919339 ENCODE Processing Pipeline b75552d86600125658d7bac252039e75 https://www.encodeproject.org/files/ENCFF141GEQ/@@download/ENCFF141GEQ.bigWig hg19 released experiment not submitted to GEO partially characterized antibody ENCFF665NJZ bigWig fold change over control ENCSR389PWB ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB5-human ENCAB473PPK DNA False 2018-01-26 ENCODE 2 ENCFF051LWI, ENCFF081SMO 1185169214 ENCODE Processing Pipeline d20f429e672fdb4d1aaa1949e6c8233b https://www.encodeproject.org/files/ENCFF665NJZ/@@download/ENCFF665NJZ.bigWig hg19 released experiment not submitted to GEO partially characterized antibody ENCFF646ILI bed narrowPeak peaks ENCSR389PWB ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB5-human ENCAB473PPK DNA False 2018-01-26 ENCODE 2 ENCFF051LWI, ENCFF081SMO 6364084 ENCODE Processing Pipeline 2b4099828aa88a5b17f6459ebd04cc47 https://www.encodeproject.org/files/ENCFF646ILI/@@download/ENCFF646ILI.bed.gz hg19 released experiment not submitted to GEO partially characterized antibody ENCFF915YAW bigWig fold change over control ENCSR389PWB ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB5-human ENCAB473PPK DNA False 2018-01-26 ENCODE 1, 2 ENCFF051LWI, ENCFF081SMO, ENCFF581ZJL, ENCFF986MVN 2237998226 ENCODE Processing Pipeline f5effcfb7aaf1d89a4ad863063d7303b https://www.encodeproject.org/files/ENCFF915YAW/@@download/ENCFF915YAW.bigWig hg19 released experiment not submitted to GEO partially characterized antibody ENCFF591FNP bed narrowPeak peaks ENCSR389PWB ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB5-human ENCAB473PPK DNA False 2018-01-26 ENCODE 1, 2 ENCFF051LWI, ENCFF081SMO, ENCFF581ZJL, ENCFF986MVN 7188067 ENCODE Processing Pipeline af9d66f57dfa9f9e7dd32fc5e5899fc2 https://www.encodeproject.org/files/ENCFF591FNP/@@download/ENCFF591FNP.bed.gz hg19 released experiment not submitted to GEO partially characterized antibody ENCFF847QJY bigBed narrowPeak peaks ENCSR389PWB ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB5-human ENCAB473PPK DNA False 2018-01-26 ENCODE 1, 2 ENCFF591FNP 10956465 ENCODE Processing Pipeline a23a1b207d8e36072a7489d75dbe5060 https://www.encodeproject.org/files/ENCFF847QJY/@@download/ENCFF847QJY.bigBed hg19 released experiment not submitted to GEO partially characterized antibody ENCFF414CUZ bed narrowPeak conservative idr thresholded peaks ENCSR389PWB ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB5-human ENCAB473PPK DNA False 2018-01-26 ENCODE 1, 2 ENCFF001TDO, ENCFF111ZUY, ENCFF591FNP, ENCFF646ILI 44292 ENCODE Processing Pipeline 4c3c7d7efff6dd377ae7343888e9f958 https://www.encodeproject.org/files/ENCFF414CUZ/@@download/ENCFF414CUZ.bed.gz hg19 released experiment not submitted to GEO partially characterized antibody ENCFF946KIR bigBed narrowPeak conservative idr thresholded peaks ENCSR389PWB ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB5-human ENCAB473PPK DNA False 2018-01-26 ENCODE 1, 2 ENCFF414CUZ 149009 ENCODE Processing Pipeline db80cdd70d7e0c211e05caa09f65ccf1 https://www.encodeproject.org/files/ENCFF946KIR/@@download/ENCFF946KIR.bigBed hg19 released experiment not submitted to GEO partially characterized antibody ENCFF111ZUY bed narrowPeak peaks ENCSR389PWB ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB5-human ENCAB473PPK DNA False 2018-01-26 ENCODE 1 ENCFF581ZJL, ENCFF986MVN 6725810 ENCODE Processing Pipeline dae84b855bb6d50384574cdcf6723666 https://www.encodeproject.org/files/ENCFF111ZUY/@@download/ENCFF111ZUY.bed.gz hg19 released experiment not submitted to GEO partially characterized antibody ENCFF321QBL bigBed narrowPeak peaks ENCSR389PWB ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB5-human ENCAB473PPK DNA False 2018-01-26 ENCODE 1 ENCFF111ZUY 11097801 ENCODE Processing Pipeline 954da401d84686adb555e5e329f0d9b1 https://www.encodeproject.org/files/ENCFF321QBL/@@download/ENCFF321QBL.bigBed hg19 released experiment not submitted to GEO partially characterized antibody ENCFF539GPJ bigBed narrowPeak peaks ENCSR389PWB ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB5-human ENCAB473PPK DNA False 2018-01-26 ENCODE 2 ENCFF646ILI 11053666 ENCODE Processing Pipeline 919a0773e05dd51700024dc4d395fa7a https://www.encodeproject.org/files/ENCFF539GPJ/@@download/ENCFF539GPJ.bigBed hg19 released experiment not submitted to GEO partially characterized antibody ENCFF691FCP bigBed narrowPeak optimal idr thresholded peaks ENCSR389PWB ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB5-human ENCAB473PPK DNA False 2018-01-26 ENCODE 1, 2 ENCFF394IKH 205796 ENCODE Processing Pipeline e61760cbb5240ba82cd23eb101c48042 https://www.encodeproject.org/files/ENCFF691FCP/@@download/ENCFF691FCP.bigBed hg19 released experiment not submitted to GEO partially characterized antibody ENCFF394IKH bed narrowPeak optimal idr thresholded peaks ENCSR389PWB ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB5-human ENCAB473PPK DNA False 2018-01-26 ENCODE 1, 2 ENCFF001TDO, ENCFF111ZUY, ENCFF591FNP, ENCFF646ILI 77678 ENCODE Processing Pipeline 765224a8c1770ecdee379605d59b3503 https://www.encodeproject.org/files/ENCFF394IKH/@@download/ENCFF394IKH.bed.gz hg19 released experiment not submitted to GEO partially characterized antibody ENCFF912XZY bam unfiltered alignments ENCSR389PWB ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB5-human ENCAB473PPK DNA False 2018-01-26 ENCODE 2 100 ENCFF637DCS, ENCFF643CGH, ENCFF813FAX 5405268599 ENCODE Processing Pipeline 2f7e3780e014b05d47b5f220a133ab5e https://www.encodeproject.org/files/ENCFF912XZY/@@download/ENCFF912XZY.bam GRCh38 released experiment not submitted to GEO partially characterized antibody ENCFF189DCP bam unfiltered alignments ENCSR389PWB ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB5-human ENCAB473PPK DNA False 2018-01-26 ENCODE 1 100 ENCFF428KVQ, ENCFF643CGH, ENCFF845NIC 6050004041 ENCODE Processing Pipeline 04814c23ef6da5e976d7cc198e818d5d https://www.encodeproject.org/files/ENCFF189DCP/@@download/ENCFF189DCP.bam GRCh38 released experiment not submitted to GEO partially characterized antibody ENCFF066FOE bam alignments ENCSR389PWB ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB5-human ENCAB473PPK DNA False 2018-01-26 ENCODE 2 100 ENCFF637DCS, ENCFF643CGH, ENCFF813FAX 4676140388 ENCODE Processing Pipeline 676685a7e76ecb50597ae36d5508a6fa https://www.encodeproject.org/files/ENCFF066FOE/@@download/ENCFF066FOE.bam GRCh38 released experiment not submitted to GEO partially characterized antibody ENCFF731WSZ bam alignments ENCSR389PWB ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB5-human ENCAB473PPK DNA False 2018-01-26 ENCODE 1 100 ENCFF428KVQ, ENCFF643CGH, ENCFF845NIC 5288478708 ENCODE Processing Pipeline aa722ece7bfbd2143015031894d9e674 https://www.encodeproject.org/files/ENCFF731WSZ/@@download/ENCFF731WSZ.bam GRCh38 released experiment not submitted to GEO partially characterized antibody ENCFF035NLK bigWig signal p-value ENCSR389PWB ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB5-human ENCAB473PPK DNA False 2018-01-26 ENCODE 1 ENCFF731WSZ, ENCFF910IKB 1390492083 ENCODE Processing Pipeline 954a6f3db4ed81443f7ad15a1865b10a https://www.encodeproject.org/files/ENCFF035NLK/@@download/ENCFF035NLK.bigWig GRCh38 released experiment not submitted to GEO partially characterized antibody ENCFF470UJV bigWig signal p-value ENCSR389PWB ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB5-human ENCAB473PPK DNA False 2018-01-26 ENCODE 2 ENCFF066FOE, ENCFF227IZS 1211979532 ENCODE Processing Pipeline 3c4145eddf0617cbef8953f289593b9b https://www.encodeproject.org/files/ENCFF470UJV/@@download/ENCFF470UJV.bigWig GRCh38 released experiment not submitted to GEO partially characterized antibody ENCFF580ZDG bigWig signal p-value ENCSR389PWB ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB5-human ENCAB473PPK DNA False 2018-01-26 ENCODE 1, 2 ENCFF066FOE, ENCFF227IZS, ENCFF731WSZ, ENCFF910IKB 2076313360 ENCODE Processing Pipeline 10a53d0533a701e9d3f49bf07acb151e https://www.encodeproject.org/files/ENCFF580ZDG/@@download/ENCFF580ZDG.bigWig GRCh38 released experiment not submitted to GEO partially characterized antibody ENCFF131QKR bigWig fold change over control ENCSR389PWB ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB5-human ENCAB473PPK DNA False 2018-01-26 ENCODE 1 ENCFF731WSZ, ENCFF910IKB 1336191245 ENCODE Processing Pipeline 60a1587c9e6b7aa482f6112930d28ffb https://www.encodeproject.org/files/ENCFF131QKR/@@download/ENCFF131QKR.bigWig GRCh38 released experiment not submitted to GEO partially characterized antibody ENCFF096XRH bigWig fold change over control ENCSR389PWB ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB5-human ENCAB473PPK DNA False 2018-01-26 ENCODE 2 ENCFF066FOE, ENCFF227IZS 1147282024 ENCODE Processing Pipeline e561cbdb44166d85b5c969e2f6870963 https://www.encodeproject.org/files/ENCFF096XRH/@@download/ENCFF096XRH.bigWig GRCh38 released experiment not submitted to GEO partially characterized antibody ENCFF622AKD bigWig fold change over control ENCSR389PWB ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB5-human ENCAB473PPK DNA False 2018-01-26 ENCODE 1, 2 ENCFF066FOE, ENCFF227IZS, ENCFF731WSZ, ENCFF910IKB 2207367187 ENCODE Processing Pipeline 0ae9a79058d369dd4e9338bc39ebc2e5 https://www.encodeproject.org/files/ENCFF622AKD/@@download/ENCFF622AKD.bigWig GRCh38 released experiment not submitted to GEO partially characterized antibody ENCFF466SJL bed narrowPeak peaks ENCSR389PWB ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB5-human ENCAB473PPK DNA False 2018-01-26 ENCODE 1 ENCFF731WSZ, ENCFF910IKB 6567394 ENCODE Processing Pipeline 95916278dc296b1023b4f6614b98353f https://www.encodeproject.org/files/ENCFF466SJL/@@download/ENCFF466SJL.bed.gz GRCh38 released experiment not submitted to GEO partially characterized antibody ENCFF642MOM bigBed narrowPeak peaks ENCSR389PWB ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB5-human ENCAB473PPK DNA False 2018-01-26 ENCODE 1 ENCFF466SJL 11111212 ENCODE Processing Pipeline 5079c6071a6092183c252ac12973b63f https://www.encodeproject.org/files/ENCFF642MOM/@@download/ENCFF642MOM.bigBed GRCh38 released experiment not submitted to GEO partially characterized antibody ENCFF217XDF bigBed narrowPeak peaks ENCSR389PWB ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB5-human ENCAB473PPK DNA False 2018-01-26 ENCODE 1, 2 ENCFF218HXP 10967056 ENCODE Processing Pipeline 30efd8c70c2a12f89ce5247eab56cc83 https://www.encodeproject.org/files/ENCFF217XDF/@@download/ENCFF217XDF.bigBed GRCh38 released experiment not submitted to GEO partially characterized antibody ENCFF007LEG bed narrowPeak conservative idr thresholded peaks ENCSR389PWB ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB5-human ENCAB473PPK DNA False 2018-01-26 ENCODE 1, 2 ENCFF218HXP, ENCFF419RSJ, ENCFF466SJL, ENCFF727TIW 43949 ENCODE Processing Pipeline bd0c474d0fbc16625c3def6754e4384c https://www.encodeproject.org/files/ENCFF007LEG/@@download/ENCFF007LEG.bed.gz GRCh38 released experiment not submitted to GEO partially characterized antibody ENCFF727TIW bed narrowPeak peaks ENCSR389PWB ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB5-human ENCAB473PPK DNA False 2018-01-26 ENCODE 2 ENCFF066FOE, ENCFF227IZS 6199715 ENCODE Processing Pipeline fa1275e74c8deb36314bf1099a85a4d1 https://www.encodeproject.org/files/ENCFF727TIW/@@download/ENCFF727TIW.bed.gz GRCh38 released experiment not submitted to GEO partially characterized antibody ENCFF218HXP bed narrowPeak peaks ENCSR389PWB ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB5-human ENCAB473PPK DNA False 2018-01-26 ENCODE 1, 2 ENCFF066FOE, ENCFF227IZS, ENCFF731WSZ, ENCFF910IKB 7174554 ENCODE Processing Pipeline 842c01e72e7c2737628d1f72182768fb https://www.encodeproject.org/files/ENCFF218HXP/@@download/ENCFF218HXP.bed.gz GRCh38 released experiment not submitted to GEO partially characterized antibody ENCFF014KUI bed narrowPeak optimal idr thresholded peaks ENCSR389PWB ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB5-human ENCAB473PPK DNA False 2018-01-26 ENCODE 1, 2 ENCFF218HXP, ENCFF419RSJ, ENCFF466SJL, ENCFF727TIW 78281 ENCODE Processing Pipeline 21b4afdf9dc4444e03516f090a066414 https://www.encodeproject.org/files/ENCFF014KUI/@@download/ENCFF014KUI.bed.gz GRCh38 released experiment not submitted to GEO partially characterized antibody ENCFF190INC bigBed narrowPeak peaks ENCSR389PWB ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB5-human ENCAB473PPK DNA False 2018-01-26 ENCODE 2 ENCFF727TIW 11063195 ENCODE Processing Pipeline d12517e574270cfd37210ea4e9255b28 https://www.encodeproject.org/files/ENCFF190INC/@@download/ENCFF190INC.bigBed GRCh38 released experiment not submitted to GEO partially characterized antibody ENCFF741GCX bigBed narrowPeak conservative idr thresholded peaks ENCSR389PWB ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB5-human ENCAB473PPK DNA False 2018-01-26 ENCODE 1, 2 ENCFF007LEG 151586 ENCODE Processing Pipeline ea91388f0948b5134010edc875bec41d https://www.encodeproject.org/files/ENCFF741GCX/@@download/ENCFF741GCX.bigBed GRCh38 released experiment not submitted to GEO partially characterized antibody ENCFF305CJI bigBed narrowPeak optimal idr thresholded peaks ENCSR389PWB ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB5-human ENCAB473PPK DNA False 2018-01-26 ENCODE 1, 2 ENCFF014KUI 210538 ENCODE Processing Pipeline 24894c53c598d56b9ef272d9e93970be https://www.encodeproject.org/files/ENCFF305CJI/@@download/ENCFF305CJI.bigBed GRCh38 released experiment not submitted to GEO partially characterized antibody ENCFF781PQI bam unfiltered alignments ENCSR895HSJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCA5-human ENCAB528BVW DNA False 2016-09-27 ENCODE 1 100 ENCFF247XZL, ENCFF444TNL, ENCFF807MUK 6585876002 ENCODE Processing Pipeline bd60a29282c20b9a10a4830abae8d5a5 https://www.encodeproject.org/files/ENCFF781PQI/@@download/ENCFF781PQI.bam hg19 released ENCFF590RPF bam unfiltered alignments ENCSR895HSJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCA5-human ENCAB528BVW DNA False 2016-09-27 ENCODE 2 100 ENCFF387THV, ENCFF807MUK, ENCFF975TEJ 5873432430 ENCODE Processing Pipeline d8359af543d39d25901097f7a55e7b42 https://www.encodeproject.org/files/ENCFF590RPF/@@download/ENCFF590RPF.bam hg19 released ENCFF444TNL fastq reads ENCSR895HSJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCA5-human ENCAB528BVW DNA False 2016-09-27 ENCODE 1 1 100 paired-ended 1 ENCFF247XZL 3033680327 Michael Snyder, Stanford aed60223c886634ae3220c4fa8572e1e SRA:SRR5112231 https://www.encodeproject.org/files/ENCFF444TNL/@@download/ENCFF444TNL.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFF/ released ENCFF387THV fastq reads ENCSR895HSJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCA5-human ENCAB528BVW DNA False 2016-09-27 ENCODE 2 1 100 paired-ended 1 ENCFF975TEJ 2659123041 Michael Snyder, Stanford dd645cfccdd4a7e0034446593d9b904d SRA:SRR5112230 https://www.encodeproject.org/files/ENCFF387THV/@@download/ENCFF387THV.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFD/ released ENCFF247XZL fastq reads ENCSR895HSJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCA5-human ENCAB528BVW DNA False 2016-09-27 ENCODE 1 1 100 paired-ended 2 ENCFF444TNL 3123155598 Michael Snyder, Stanford d67f0c9de54dc373bc7255786d84f408 SRA:SRR5112231 https://www.encodeproject.org/files/ENCFF247XZL/@@download/ENCFF247XZL.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFH/ released ENCFF975TEJ fastq reads ENCSR895HSJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCA5-human ENCAB528BVW DNA False 2016-09-27 ENCODE 2 1 100 paired-ended 2 ENCFF387THV 2735803648 Michael Snyder, Stanford 1f3c6f7436ac32dd454ad8bc3ae5089f SRA:SRR5112230 https://www.encodeproject.org/files/ENCFF975TEJ/@@download/ENCFF975TEJ.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFA/ released ENCFF269EAD bam alignments ENCSR895HSJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCA5-human ENCAB528BVW DNA False 2016-09-27 ENCODE 2 100 ENCFF387THV, ENCFF807MUK, ENCFF975TEJ 5142050630 ENCODE Processing Pipeline 3ec178816536393440f54a6085b1e958 https://www.encodeproject.org/files/ENCFF269EAD/@@download/ENCFF269EAD.bam hg19 released ENCFF641ACA bam alignments ENCSR895HSJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCA5-human ENCAB528BVW DNA False 2016-09-27 ENCODE 1 100 ENCFF247XZL, ENCFF444TNL, ENCFF807MUK 5703611470 ENCODE Processing Pipeline f6cd48b41f9fd0f52240a4709f9c29b5 https://www.encodeproject.org/files/ENCFF641ACA/@@download/ENCFF641ACA.bam hg19 released ENCFF719UDS bigWig signal p-value ENCSR895HSJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCA5-human ENCAB528BVW DNA False 2016-09-27 ENCODE 1 ENCFF581ZJL, ENCFF641ACA 1284651562 ENCODE Processing Pipeline 7a419a9934f318e1aa58037af70792b0 https://www.encodeproject.org/files/ENCFF719UDS/@@download/ENCFF719UDS.bigWig hg19 released ENCFF040TQL bigWig signal p-value ENCSR895HSJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCA5-human ENCAB528BVW DNA False 2016-09-27 ENCODE 2 ENCFF051LWI, ENCFF269EAD 1295915352 ENCODE Processing Pipeline 80ef31a2d4914a906dda88f37d20f9da https://www.encodeproject.org/files/ENCFF040TQL/@@download/ENCFF040TQL.bigWig hg19 released ENCFF361JWO bigWig signal p-value ENCSR895HSJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCA5-human ENCAB528BVW DNA False 2016-09-27 ENCODE 1, 2 ENCFF051LWI, ENCFF269EAD, ENCFF581ZJL, ENCFF641ACA 2060761055 ENCODE Processing Pipeline dbed8db157fa024909feb08f8cdf7f9a https://www.encodeproject.org/files/ENCFF361JWO/@@download/ENCFF361JWO.bigWig hg19 released ENCFF988BJZ bigWig fold change over control ENCSR895HSJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCA5-human ENCAB528BVW DNA False 2016-09-27 ENCODE 1 ENCFF581ZJL, ENCFF641ACA 1433427105 ENCODE Processing Pipeline e1f05f91b9477058d7e35ae37e4bcbee https://www.encodeproject.org/files/ENCFF988BJZ/@@download/ENCFF988BJZ.bigWig hg19 released ENCFF617BQG bigWig fold change over control ENCSR895HSJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCA5-human ENCAB528BVW DNA False 2016-09-27 ENCODE 2 ENCFF051LWI, ENCFF269EAD 1338205301 ENCODE Processing Pipeline 880b6dfd4cdee903fbd8088c7392a212 https://www.encodeproject.org/files/ENCFF617BQG/@@download/ENCFF617BQG.bigWig hg19 released ENCFF847GKQ bigWig fold change over control ENCSR895HSJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCA5-human ENCAB528BVW DNA False 2016-09-27 ENCODE 1, 2 ENCFF051LWI, ENCFF269EAD, ENCFF581ZJL, ENCFF641ACA 2379654715 ENCODE Processing Pipeline a723632ed91ac29b919f332664638b5b https://www.encodeproject.org/files/ENCFF847GKQ/@@download/ENCFF847GKQ.bigWig hg19 released ENCFF156CAB bed narrowPeak peaks ENCSR895HSJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCA5-human ENCAB528BVW DNA False 2016-09-27 ENCODE 1 ENCFF581ZJL, ENCFF641ACA 7197623 ENCODE Processing Pipeline 258dc50cffc52d10458538e5364f12b1 https://www.encodeproject.org/files/ENCFF156CAB/@@download/ENCFF156CAB.bed.gz hg19 released ENCFF547QMS bed narrowPeak peaks ENCSR895HSJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCA5-human ENCAB528BVW DNA False 2016-09-27 ENCODE 2 ENCFF051LWI, ENCFF269EAD 7104313 ENCODE Processing Pipeline 4b45735c8984edb6cb159083cf179107 https://www.encodeproject.org/files/ENCFF547QMS/@@download/ENCFF547QMS.bed.gz hg19 released ENCFF305RMT bed narrowPeak peaks ENCSR895HSJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCA5-human ENCAB528BVW DNA False 2016-09-27 ENCODE 1, 2 ENCFF051LWI, ENCFF269EAD, ENCFF581ZJL, ENCFF641ACA 7247504 ENCODE Processing Pipeline 7f3fff033890b11d8b8451fd6ea3f9f7 https://www.encodeproject.org/files/ENCFF305RMT/@@download/ENCFF305RMT.bed.gz hg19 released ENCFF305JTM bigBed narrowPeak peaks ENCSR895HSJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCA5-human ENCAB528BVW DNA False 2016-09-27 ENCODE 1 ENCFF156CAB 12734981 ENCODE Processing Pipeline 0110378340e1612f49a34067dc1c858f https://www.encodeproject.org/files/ENCFF305JTM/@@download/ENCFF305JTM.bigBed hg19 released ENCFF023PDH bigBed narrowPeak peaks ENCSR895HSJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCA5-human ENCAB528BVW DNA False 2016-09-27 ENCODE 2 ENCFF547QMS 12921706 ENCODE Processing Pipeline ada1153e0df41def78b5bcefdef7570f https://www.encodeproject.org/files/ENCFF023PDH/@@download/ENCFF023PDH.bigBed hg19 released ENCFF786KEL bigBed narrowPeak peaks ENCSR895HSJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCA5-human ENCAB528BVW DNA False 2016-09-27 ENCODE 1, 2 ENCFF305RMT 12667262 ENCODE Processing Pipeline d441865d875f825a26bcd941fcf53d8f https://www.encodeproject.org/files/ENCFF786KEL/@@download/ENCFF786KEL.bigBed hg19 released ENCFF995NIE bed narrowPeak optimal idr thresholded peaks ENCSR895HSJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCA5-human ENCAB528BVW DNA False 2016-09-27 ENCODE 1, 2 ENCFF001TDO, ENCFF156CAB, ENCFF305RMT, ENCFF547QMS 357758 ENCODE Processing Pipeline 19f29cf8d02b673dca79fcc242980eb8 https://www.encodeproject.org/files/ENCFF995NIE/@@download/ENCFF995NIE.bed.gz hg19 released ENCFF397TAH bigBed narrowPeak optimal idr thresholded peaks ENCSR895HSJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCA5-human ENCAB528BVW DNA False 2016-09-27 ENCODE 1, 2 ENCFF995NIE 684906 ENCODE Processing Pipeline f13f59df8b64c177ad4aa5e2860f1c0d https://www.encodeproject.org/files/ENCFF397TAH/@@download/ENCFF397TAH.bigBed hg19 released ENCFF989TYW bed narrowPeak conservative idr thresholded peaks ENCSR895HSJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCA5-human ENCAB528BVW DNA False 2016-09-27 ENCODE 1, 2 ENCFF001TDO, ENCFF156CAB, ENCFF305RMT, ENCFF547QMS 201341 ENCODE Processing Pipeline dd1ddf189fed03527b9c39a64942b70b https://www.encodeproject.org/files/ENCFF989TYW/@@download/ENCFF989TYW.bed.gz hg19 released ENCFF679NWH bigBed narrowPeak conservative idr thresholded peaks ENCSR895HSJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCA5-human ENCAB528BVW DNA False 2016-09-27 ENCODE 1, 2 ENCFF989TYW 442933 ENCODE Processing Pipeline 0439dca1071b1028e2fb2113fb305488 https://www.encodeproject.org/files/ENCFF679NWH/@@download/ENCFF679NWH.bigBed hg19 released ENCFF661WUX bam unfiltered alignments ENCSR895HSJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCA5-human ENCAB528BVW DNA False 2016-09-27 ENCODE 2 100 ENCFF387THV, ENCFF643CGH, ENCFF975TEJ 5878842868 ENCODE Processing Pipeline 48f77f77350f295506e09080dfd4a797 https://www.encodeproject.org/files/ENCFF661WUX/@@download/ENCFF661WUX.bam GRCh38 released ENCFF687TMY bam unfiltered alignments ENCSR895HSJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCA5-human ENCAB528BVW DNA False 2016-09-27 ENCODE 1 100 ENCFF247XZL, ENCFF444TNL, ENCFF643CGH 6591203705 ENCODE Processing Pipeline b950b5eb9de8ebd264a5db0d6136c985 https://www.encodeproject.org/files/ENCFF687TMY/@@download/ENCFF687TMY.bam GRCh38 released ENCFF122TGF bam alignments ENCSR895HSJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCA5-human ENCAB528BVW DNA False 2016-09-27 ENCODE 2 100 ENCFF387THV, ENCFF643CGH, ENCFF975TEJ 5145634491 ENCODE Processing Pipeline 761644555843e7c46a1834cbe240fcb9 https://www.encodeproject.org/files/ENCFF122TGF/@@download/ENCFF122TGF.bam GRCh38 released ENCFF914TEL bam alignments ENCSR895HSJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCA5-human ENCAB528BVW DNA False 2016-09-27 ENCODE 1 100 ENCFF247XZL, ENCFF444TNL, ENCFF643CGH 5707839605 ENCODE Processing Pipeline ecf62f841bc83027b2bb333d628be15d https://www.encodeproject.org/files/ENCFF914TEL/@@download/ENCFF914TEL.bam GRCh38 released ENCFF356ESC bigWig signal p-value ENCSR895HSJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCA5-human ENCAB528BVW DNA False 2016-09-27 ENCODE 1 ENCFF910IKB, ENCFF914TEL 1290542454 ENCODE Processing Pipeline e3931cec4740d9d5f84be7f4be51039f https://www.encodeproject.org/files/ENCFF356ESC/@@download/ENCFF356ESC.bigWig GRCh38 released ENCFF855CEC bigWig signal p-value ENCSR895HSJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCA5-human ENCAB528BVW DNA False 2016-09-27 ENCODE 2 ENCFF122TGF, ENCFF227IZS 1138976280 ENCODE Processing Pipeline a10bf3f224bf833089a28d6d9c12cc58 https://www.encodeproject.org/files/ENCFF855CEC/@@download/ENCFF855CEC.bigWig GRCh38 released ENCFF243YCJ bigWig signal p-value ENCSR895HSJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCA5-human ENCAB528BVW DNA False 2016-09-27 ENCODE 1, 2 ENCFF122TGF, ENCFF227IZS, ENCFF910IKB, ENCFF914TEL 1852666741 ENCODE Processing Pipeline 0272830068b0d5e9c5629ba8835944c7 https://www.encodeproject.org/files/ENCFF243YCJ/@@download/ENCFF243YCJ.bigWig GRCh38 released ENCFF568YBK bigWig fold change over control ENCSR895HSJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCA5-human ENCAB528BVW DNA False 2016-09-27 ENCODE 1 ENCFF910IKB, ENCFF914TEL 1442669797 ENCODE Processing Pipeline 4b2719c89883faf0d3774b4f011bc83b https://www.encodeproject.org/files/ENCFF568YBK/@@download/ENCFF568YBK.bigWig GRCh38 released ENCFF337PHY bigWig fold change over control ENCSR895HSJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCA5-human ENCAB528BVW DNA False 2016-09-27 ENCODE 2 ENCFF122TGF, ENCFF227IZS 1340381938 ENCODE Processing Pipeline 95af0a4930e7b22038b8c81c77ee71f5 https://www.encodeproject.org/files/ENCFF337PHY/@@download/ENCFF337PHY.bigWig GRCh38 released ENCFF917GZE bigWig fold change over control ENCSR895HSJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCA5-human ENCAB528BVW DNA False 2016-09-27 ENCODE 1, 2 ENCFF122TGF, ENCFF227IZS, ENCFF910IKB, ENCFF914TEL 2382052746 ENCODE Processing Pipeline 9368c8a8fcac3c28e795bcce503bd0e5 https://www.encodeproject.org/files/ENCFF917GZE/@@download/ENCFF917GZE.bigWig GRCh38 released ENCFF493PNH bed narrowPeak peaks ENCSR895HSJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCA5-human ENCAB528BVW DNA False 2016-09-27 ENCODE 1 ENCFF910IKB, ENCFF914TEL 7177371 ENCODE Processing Pipeline ceada2171c29e43d6dded5463b60324b https://www.encodeproject.org/files/ENCFF493PNH/@@download/ENCFF493PNH.bed.gz GRCh38 released ENCFF168SEL bed narrowPeak peaks ENCSR895HSJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCA5-human ENCAB528BVW DNA False 2016-09-27 ENCODE 2 ENCFF122TGF, ENCFF227IZS 7051302 ENCODE Processing Pipeline 791dc456bd30725d113834a0b887ef5f https://www.encodeproject.org/files/ENCFF168SEL/@@download/ENCFF168SEL.bed.gz GRCh38 released ENCFF601RBH bed narrowPeak peaks ENCSR895HSJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCA5-human ENCAB528BVW DNA False 2016-09-27 ENCODE 1, 2 ENCFF122TGF, ENCFF227IZS, ENCFF910IKB, ENCFF914TEL 7249354 ENCODE Processing Pipeline 3b06902021f768b7994f8161cdce7bc6 https://www.encodeproject.org/files/ENCFF601RBH/@@download/ENCFF601RBH.bed.gz GRCh38 released ENCFF787FGD bigBed narrowPeak peaks ENCSR895HSJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCA5-human ENCAB528BVW DNA False 2016-09-27 ENCODE 1 ENCFF493PNH 12742738 ENCODE Processing Pipeline 8bded22e20c2a94cdc949497faea42d8 https://www.encodeproject.org/files/ENCFF787FGD/@@download/ENCFF787FGD.bigBed GRCh38 released ENCFF890BDZ bigBed narrowPeak peaks ENCSR895HSJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCA5-human ENCAB528BVW DNA False 2016-09-27 ENCODE 2 ENCFF168SEL 12929368 ENCODE Processing Pipeline 50fc2980ed5a21a904750fc6af5ac0dc https://www.encodeproject.org/files/ENCFF890BDZ/@@download/ENCFF890BDZ.bigBed GRCh38 released ENCFF827JNR bigBed narrowPeak peaks ENCSR895HSJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCA5-human ENCAB528BVW DNA False 2016-09-27 ENCODE 1, 2 ENCFF601RBH 12675830 ENCODE Processing Pipeline 275b8c5fbb31e14d79e38800dcda7e88 https://www.encodeproject.org/files/ENCFF827JNR/@@download/ENCFF827JNR.bigBed GRCh38 released ENCFF438DWU bed narrowPeak conservative idr thresholded peaks ENCSR895HSJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCA5-human ENCAB528BVW DNA False 2016-09-27 ENCODE 1, 2 ENCFF168SEL, ENCFF419RSJ, ENCFF493PNH, ENCFF601RBH 200296 ENCODE Processing Pipeline 12a1ab2c3e30f79bc7c2d1fb59dba39f https://www.encodeproject.org/files/ENCFF438DWU/@@download/ENCFF438DWU.bed.gz GRCh38 released ENCFF951HBR bigBed narrowPeak conservative idr thresholded peaks ENCSR895HSJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCA5-human ENCAB528BVW DNA False 2016-09-27 ENCODE 1, 2 ENCFF438DWU 443062 ENCODE Processing Pipeline 3ac20920ff15decb3ba17acc104cde2b https://www.encodeproject.org/files/ENCFF951HBR/@@download/ENCFF951HBR.bigBed GRCh38 released ENCFF481TNF bed narrowPeak optimal idr thresholded peaks ENCSR895HSJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCA5-human ENCAB528BVW DNA False 2016-09-27 ENCODE 1, 2 ENCFF168SEL, ENCFF419RSJ, ENCFF493PNH, ENCFF601RBH 355021 ENCODE Processing Pipeline e342a3d251dfd1eb825e08c2f533a212 https://www.encodeproject.org/files/ENCFF481TNF/@@download/ENCFF481TNF.bed.gz GRCh38 released ENCFF344JHK bigBed narrowPeak optimal idr thresholded peaks ENCSR895HSJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCA5-human ENCAB528BVW DNA False 2016-09-27 ENCODE 1, 2 ENCFF481TNF 683288 ENCODE Processing Pipeline 5be3dcba9219787f5937be4b1e355484 https://www.encodeproject.org/files/ENCFF344JHK/@@download/ENCFF344JHK.bigBed GRCh38 released ENCFF556LOK fastq reads ENCSR102KIN ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZMYM3-human ENCAB426WVA DNA False 2016-10-12 ENCODE 2 1 76 single-ended 1524515699 Richard Myers, HAIB 1fde63d0c539421e2bc0d0f4730d0157 SRA:SRR5331238 https://www.encodeproject.org/files/ENCFF556LOK/@@download/ENCFF556LOK.fastq.gz Illumina HiSeq 2000 /files/ENCFF993VKM/ released mixed read lengths, inconsistent control read length, antibody characterized with exemption ENCFF446UUV fastq reads ENCSR102KIN ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZMYM3-human ENCAB426WVA DNA False 2016-10-12 ENCODE 1 1 50 single-ended 1263056275 Richard Myers, HAIB 45d72be7311c596552bd703b744a3140 SRA:SRR5331239 https://www.encodeproject.org/files/ENCFF446UUV/@@download/ENCFF446UUV.fastq.gz Illumina HiSeq 2000 /files/ENCFF774EJH/ released mixed read lengths, antibody characterized with exemption ENCFF047ILC bam unfiltered alignments ENCSR102KIN ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZMYM3-human ENCAB426WVA DNA False 2016-10-12 ENCODE 1 50 ENCFF446UUV, ENCFF643CGH 1420843039 ENCODE Processing Pipeline bfd9001a73eb04f3ef904ef2f8eccb84 https://www.encodeproject.org/files/ENCFF047ILC/@@download/ENCFF047ILC.bam GRCh38 released mixed read lengths, antibody characterized with exemption ENCFF426GAB bam unfiltered alignments ENCSR102KIN ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZMYM3-human ENCAB426WVA DNA False 2016-10-12 ENCODE 2 50 ENCFF556LOK, ENCFF643CGH 1306633197 ENCODE Processing Pipeline 2916e32b0c0ebe2e5b1388aaf9887e92 https://www.encodeproject.org/files/ENCFF426GAB/@@download/ENCFF426GAB.bam GRCh38 released mixed read lengths, antibody characterized with exemption ENCFF669FJO bam unfiltered alignments ENCSR102KIN ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZMYM3-human ENCAB426WVA DNA False 2016-10-12 ENCODE 2 50 ENCFF556LOK, ENCFF807MUK 1303240785 ENCODE Processing Pipeline 17072366f8541997f14db27bf76deb18 https://www.encodeproject.org/files/ENCFF669FJO/@@download/ENCFF669FJO.bam hg19 released mixed read lengths, antibody characterized with exemption ENCFF056HVT bam alignments ENCSR102KIN ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZMYM3-human ENCAB426WVA DNA False 2016-10-12 ENCODE 1 50 ENCFF446UUV, ENCFF643CGH 1018260336 ENCODE Processing Pipeline f349378b74a410e990d2ed137cb16325 https://www.encodeproject.org/files/ENCFF056HVT/@@download/ENCFF056HVT.bam GRCh38 released mixed read lengths, antibody characterized with exemption ENCFF277XXK bam alignments ENCSR102KIN ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZMYM3-human ENCAB426WVA DNA False 2016-10-12 ENCODE 2 50 ENCFF556LOK, ENCFF807MUK 985916483 ENCODE Processing Pipeline 17b791e2e9372cd6ceecf06865ef4f11 https://www.encodeproject.org/files/ENCFF277XXK/@@download/ENCFF277XXK.bam hg19 released mixed read lengths, antibody characterized with exemption ENCFF900QPQ bam alignments ENCSR102KIN ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZMYM3-human ENCAB426WVA DNA False 2016-10-12 ENCODE 2 50 ENCFF556LOK, ENCFF643CGH 985787658 ENCODE Processing Pipeline c7c48fd1843dd396c775acf23d0f6960 https://www.encodeproject.org/files/ENCFF900QPQ/@@download/ENCFF900QPQ.bam GRCh38 released mixed read lengths, antibody characterized with exemption ENCFF463TPW bam unfiltered alignments ENCSR102KIN ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZMYM3-human ENCAB426WVA DNA False 2016-10-12 ENCODE 1 50 ENCFF446UUV, ENCFF807MUK 1416261240 ENCODE Processing Pipeline d93fb02353c3bc90dbb0ab42cd4e571e https://www.encodeproject.org/files/ENCFF463TPW/@@download/ENCFF463TPW.bam hg19 released mixed read lengths, antibody characterized with exemption ENCFF496KXN bam alignments ENCSR102KIN ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZMYM3-human ENCAB426WVA DNA False 2016-10-12 ENCODE 1 50 ENCFF446UUV, ENCFF807MUK 1018521249 ENCODE Processing Pipeline 76bd268c0c19886a9c33629981e4bf00 https://www.encodeproject.org/files/ENCFF496KXN/@@download/ENCFF496KXN.bam hg19 released mixed read lengths, antibody characterized with exemption ENCFF470KQI bigWig signal p-value ENCSR102KIN ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZMYM3-human ENCAB426WVA DNA False 2016-10-12 ENCODE 2 ENCFF277XXK, ENCFF454QBD, ENCFF847YDJ 759882354 ENCODE Processing Pipeline b7d990f92b094da38d8fe84995b18d92 https://www.encodeproject.org/files/ENCFF470KQI/@@download/ENCFF470KQI.bigWig hg19 released mixed read lengths, antibody characterized with exemption ENCFF405ZFU bigWig fold change over control ENCSR102KIN ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZMYM3-human ENCAB426WVA DNA False 2016-10-12 ENCODE 1 ENCFF454QBD, ENCFF496KXN, ENCFF847YDJ 737454293 ENCODE Processing Pipeline 04b65a7580e08f464e5430bdd880963b https://www.encodeproject.org/files/ENCFF405ZFU/@@download/ENCFF405ZFU.bigWig hg19 released mixed read lengths, antibody characterized with exemption ENCFF133HPH bigWig signal p-value ENCSR102KIN ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZMYM3-human ENCAB426WVA DNA False 2016-10-12 ENCODE 1, 2 ENCFF277XXK, ENCFF454QBD, ENCFF496KXN, ENCFF847YDJ 872172530 ENCODE Processing Pipeline a7ca548262b47afcd536bfbe5a3bad9d https://www.encodeproject.org/files/ENCFF133HPH/@@download/ENCFF133HPH.bigWig hg19 released mixed read lengths, antibody characterized with exemption ENCFF469DWQ bigBed narrowPeak peaks ENCSR102KIN ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZMYM3-human ENCAB426WVA DNA False 2016-10-12 ENCODE 1 ENCFF204QNV 13400045 ENCODE Processing Pipeline 3a81acc926d6c3cc335a437bca28cd4a https://www.encodeproject.org/files/ENCFF469DWQ/@@download/ENCFF469DWQ.bigBed hg19 released mixed read lengths, antibody characterized with exemption ENCFF292EOF bigWig signal p-value ENCSR102KIN ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZMYM3-human ENCAB426WVA DNA False 2016-10-12 ENCODE 1 ENCFF454QBD, ENCFF496KXN, ENCFF847YDJ 910543325 ENCODE Processing Pipeline 65510e5613353b952ec26352d90a2999 https://www.encodeproject.org/files/ENCFF292EOF/@@download/ENCFF292EOF.bigWig hg19 released mixed read lengths, antibody characterized with exemption ENCFF711IOY bigWig fold change over control ENCSR102KIN ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZMYM3-human ENCAB426WVA DNA False 2016-10-12 ENCODE 1, 2 ENCFF277XXK, ENCFF454QBD, ENCFF496KXN, ENCFF847YDJ 1076240608 ENCODE Processing Pipeline 7b01948b649034e53227966afcb16d73 https://www.encodeproject.org/files/ENCFF711IOY/@@download/ENCFF711IOY.bigWig hg19 released mixed read lengths, antibody characterized with exemption ENCFF438LLN bed narrowPeak peaks ENCSR102KIN ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZMYM3-human ENCAB426WVA DNA False 2016-10-12 ENCODE 1, 2 ENCFF277XXK, ENCFF454QBD, ENCFF496KXN, ENCFF847YDJ 6963927 ENCODE Processing Pipeline 8da2c2417956aedccde0b15abe913175 https://www.encodeproject.org/files/ENCFF438LLN/@@download/ENCFF438LLN.bed.gz hg19 released mixed read lengths, antibody characterized with exemption ENCFF069OII bigBed narrowPeak peaks ENCSR102KIN ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZMYM3-human ENCAB426WVA DNA False 2016-10-12 ENCODE 1, 2 ENCFF438LLN 13418968 ENCODE Processing Pipeline 538750a07388ff688e12731b94431599 https://www.encodeproject.org/files/ENCFF069OII/@@download/ENCFF069OII.bigBed hg19 released mixed read lengths, antibody characterized with exemption ENCFF988WAF bed narrowPeak conservative idr thresholded peaks ENCSR102KIN ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZMYM3-human ENCAB426WVA DNA False 2016-10-12 ENCODE 1, 2 ENCFF001TDO, ENCFF204QNV, ENCFF438LLN, ENCFF925VOV 587450 ENCODE Processing Pipeline 00e2911c430ac59c84433e36a0a49b18 https://www.encodeproject.org/files/ENCFF988WAF/@@download/ENCFF988WAF.bed.gz hg19 released mixed read lengths, antibody characterized with exemption ENCFF217SNL bigWig fold change over control ENCSR102KIN ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZMYM3-human ENCAB426WVA DNA False 2016-10-12 ENCODE 2 ENCFF277XXK, ENCFF454QBD, ENCFF847YDJ 692955740 ENCODE Processing Pipeline 03afe5b0bde32dad81f385715451455c https://www.encodeproject.org/files/ENCFF217SNL/@@download/ENCFF217SNL.bigWig hg19 released mixed read lengths, antibody characterized with exemption ENCFF204QNV bed narrowPeak peaks ENCSR102KIN ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZMYM3-human ENCAB426WVA DNA False 2016-10-12 ENCODE 1 ENCFF454QBD, ENCFF496KXN, ENCFF847YDJ 6492911 ENCODE Processing Pipeline 9de266ebdbe9e0035b2c922738642fcf https://www.encodeproject.org/files/ENCFF204QNV/@@download/ENCFF204QNV.bed.gz hg19 released mixed read lengths, antibody characterized with exemption ENCFF925VOV bed narrowPeak peaks ENCSR102KIN ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZMYM3-human ENCAB426WVA DNA False 2016-10-12 ENCODE 2 ENCFF277XXK, ENCFF454QBD, ENCFF847YDJ 6133457 ENCODE Processing Pipeline 225a6eb7aa177f322f26910ce442b90d https://www.encodeproject.org/files/ENCFF925VOV/@@download/ENCFF925VOV.bed.gz hg19 released mixed read lengths, antibody characterized with exemption ENCFF946VWH bigBed narrowPeak peaks ENCSR102KIN ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZMYM3-human ENCAB426WVA DNA False 2016-10-12 ENCODE 2 ENCFF925VOV 13387072 ENCODE Processing Pipeline 6c51928a3171a38c17d0874769086d6a https://www.encodeproject.org/files/ENCFF946VWH/@@download/ENCFF946VWH.bigBed hg19 released mixed read lengths, antibody characterized with exemption ENCFF765ZOV bigBed narrowPeak optimal idr thresholded peaks ENCSR102KIN ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZMYM3-human ENCAB426WVA DNA False 2016-10-12 ENCODE 1, 2 ENCFF511QHY 1251780 ENCODE Processing Pipeline f1af358b4115ce184bf058deccd55097 https://www.encodeproject.org/files/ENCFF765ZOV/@@download/ENCFF765ZOV.bigBed hg19 released mixed read lengths, antibody characterized with exemption ENCFF491JPM bigBed narrowPeak conservative idr thresholded peaks ENCSR102KIN ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZMYM3-human ENCAB426WVA DNA False 2016-10-12 ENCODE 1, 2 ENCFF988WAF 1132399 ENCODE Processing Pipeline efb9488e1e33ed626e579bfcd66b4665 https://www.encodeproject.org/files/ENCFF491JPM/@@download/ENCFF491JPM.bigBed hg19 released mixed read lengths, antibody characterized with exemption ENCFF511QHY bed narrowPeak optimal idr thresholded peaks ENCSR102KIN ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZMYM3-human ENCAB426WVA DNA False 2016-10-12 ENCODE 1, 2 ENCFF001TDO, ENCFF204QNV, ENCFF438LLN, ENCFF925VOV 668402 ENCODE Processing Pipeline 2a540d117bdccfec94aa0f5dc33dc677 https://www.encodeproject.org/files/ENCFF511QHY/@@download/ENCFF511QHY.bed.gz hg19 released mixed read lengths, antibody characterized with exemption ENCFF126FSU bigWig signal p-value ENCSR102KIN ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZMYM3-human ENCAB426WVA DNA False 2016-10-12 ENCODE 2 ENCFF092PMQ, ENCFF213VVQ, ENCFF900QPQ 799821343 ENCODE Processing Pipeline 96ffff71d79dcf5c6be2de38d37a5525 https://www.encodeproject.org/files/ENCFF126FSU/@@download/ENCFF126FSU.bigWig GRCh38 released mixed read lengths, antibody characterized with exemption ENCFF786NPW bigWig signal p-value ENCSR102KIN ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZMYM3-human ENCAB426WVA DNA False 2016-10-12 ENCODE 1 ENCFF056HVT, ENCFF092PMQ, ENCFF213VVQ 838730578 ENCODE Processing Pipeline ff18544cc704d6d1ba24316dee52c3f5 https://www.encodeproject.org/files/ENCFF786NPW/@@download/ENCFF786NPW.bigWig GRCh38 released mixed read lengths, antibody characterized with exemption ENCFF078IDT bigWig signal p-value ENCSR102KIN ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZMYM3-human ENCAB426WVA DNA False 2016-10-12 ENCODE 1, 2 ENCFF056HVT, ENCFF092PMQ, ENCFF213VVQ, ENCFF900QPQ 1146039451 ENCODE Processing Pipeline b15bcff2d599337e86f1262b9140e767 https://www.encodeproject.org/files/ENCFF078IDT/@@download/ENCFF078IDT.bigWig GRCh38 released mixed read lengths, antibody characterized with exemption ENCFF534OWD bigWig fold change over control ENCSR102KIN ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZMYM3-human ENCAB426WVA DNA False 2016-10-12 ENCODE 1 ENCFF056HVT, ENCFF092PMQ, ENCFF213VVQ 732677538 ENCODE Processing Pipeline e8c9628e47f4df5c49257722023298fc https://www.encodeproject.org/files/ENCFF534OWD/@@download/ENCFF534OWD.bigWig GRCh38 released mixed read lengths, antibody characterized with exemption ENCFF383COK bigWig fold change over control ENCSR102KIN ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZMYM3-human ENCAB426WVA DNA False 2016-10-12 ENCODE 2 ENCFF092PMQ, ENCFF213VVQ, ENCFF900QPQ 706973741 ENCODE Processing Pipeline f9cdde531a2b6016bc27a7bae810f8b3 https://www.encodeproject.org/files/ENCFF383COK/@@download/ENCFF383COK.bigWig GRCh38 released mixed read lengths, antibody characterized with exemption ENCFF152NWJ bigWig fold change over control ENCSR102KIN ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZMYM3-human ENCAB426WVA DNA False 2016-10-12 ENCODE 1, 2 ENCFF056HVT, ENCFF092PMQ, ENCFF213VVQ, ENCFF900QPQ 1083564980 ENCODE Processing Pipeline e204ff8f79d26718917b9721fca24d97 https://www.encodeproject.org/files/ENCFF152NWJ/@@download/ENCFF152NWJ.bigWig GRCh38 released mixed read lengths, antibody characterized with exemption ENCFF854LEH bed narrowPeak peaks ENCSR102KIN ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZMYM3-human ENCAB426WVA DNA False 2016-10-12 ENCODE 1 ENCFF056HVT, ENCFF092PMQ, ENCFF213VVQ 6339723 ENCODE Processing Pipeline 88121965170dc85fbd7057b07039001c https://www.encodeproject.org/files/ENCFF854LEH/@@download/ENCFF854LEH.bed.gz GRCh38 released mixed read lengths, antibody characterized with exemption ENCFF974TEI bed narrowPeak peaks ENCSR102KIN ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZMYM3-human ENCAB426WVA DNA False 2016-10-12 ENCODE 2 ENCFF092PMQ, ENCFF213VVQ, ENCFF900QPQ 5990521 ENCODE Processing Pipeline 5f9413804d50a7ae7c224968c18f34c8 https://www.encodeproject.org/files/ENCFF974TEI/@@download/ENCFF974TEI.bed.gz GRCh38 released mixed read lengths, antibody characterized with exemption ENCFF211PSS bed narrowPeak peaks ENCSR102KIN ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZMYM3-human ENCAB426WVA DNA False 2016-10-12 ENCODE 1, 2 ENCFF056HVT, ENCFF092PMQ, ENCFF213VVQ, ENCFF900QPQ 6866642 ENCODE Processing Pipeline 0bbab442c1d8d0f96f2e28a07215d854 https://www.encodeproject.org/files/ENCFF211PSS/@@download/ENCFF211PSS.bed.gz GRCh38 released mixed read lengths, antibody characterized with exemption ENCFF070HSU bigBed narrowPeak peaks ENCSR102KIN ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZMYM3-human ENCAB426WVA DNA False 2016-10-12 ENCODE 1 ENCFF854LEH 13392212 ENCODE Processing Pipeline af7103e625e692de2fb655b10c461fa9 https://www.encodeproject.org/files/ENCFF070HSU/@@download/ENCFF070HSU.bigBed GRCh38 released mixed read lengths, antibody characterized with exemption ENCFF855BFC bigBed narrowPeak peaks ENCSR102KIN ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZMYM3-human ENCAB426WVA DNA False 2016-10-12 ENCODE 2 ENCFF974TEI 13371222 ENCODE Processing Pipeline d94aa98f7792c966ad79b104cfbb6893 https://www.encodeproject.org/files/ENCFF855BFC/@@download/ENCFF855BFC.bigBed GRCh38 released mixed read lengths, antibody characterized with exemption ENCFF893VZW bigBed narrowPeak peaks ENCSR102KIN ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZMYM3-human ENCAB426WVA DNA False 2016-10-12 ENCODE 1, 2 ENCFF211PSS 13416916 ENCODE Processing Pipeline 9a674e4ad2082d4d5a6beef36b6d5567 https://www.encodeproject.org/files/ENCFF893VZW/@@download/ENCFF893VZW.bigBed GRCh38 released mixed read lengths, antibody characterized with exemption ENCFF429TTF bed narrowPeak conservative idr thresholded peaks ENCSR102KIN ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZMYM3-human ENCAB426WVA DNA False 2016-10-12 ENCODE 1, 2 ENCFF211PSS, ENCFF419RSJ, ENCFF854LEH, ENCFF974TEI 585763 ENCODE Processing Pipeline 0f170d7b83a83f5e6232e5f2c409832d https://www.encodeproject.org/files/ENCFF429TTF/@@download/ENCFF429TTF.bed.gz GRCh38 released mixed read lengths, antibody characterized with exemption ENCFF278VAF bigBed narrowPeak optimal idr thresholded peaks ENCSR102KIN ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZMYM3-human ENCAB426WVA DNA False 2016-10-12 ENCODE 1, 2 ENCFF195IFB 1256919 ENCODE Processing Pipeline 033481be898c6c9c108bf515ef7d302e https://www.encodeproject.org/files/ENCFF278VAF/@@download/ENCFF278VAF.bigBed GRCh38 released mixed read lengths, antibody characterized with exemption ENCFF909FDP bigBed narrowPeak conservative idr thresholded peaks ENCSR102KIN ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZMYM3-human ENCAB426WVA DNA False 2016-10-12 ENCODE 1, 2 ENCFF429TTF 1130225 ENCODE Processing Pipeline 567c2d7ff631bc0dc65e8465c0a32de7 https://www.encodeproject.org/files/ENCFF909FDP/@@download/ENCFF909FDP.bigBed GRCh38 released mixed read lengths, antibody characterized with exemption ENCFF195IFB bed narrowPeak optimal idr thresholded peaks ENCSR102KIN ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZMYM3-human ENCAB426WVA DNA False 2016-10-12 ENCODE 1, 2 ENCFF211PSS, ENCFF419RSJ, ENCFF854LEH, ENCFF974TEI 670081 ENCODE Processing Pipeline baaa2bdfb02d2094530f3826d8684ed1 https://www.encodeproject.org/files/ENCFF195IFB/@@download/ENCFF195IFB.bed.gz GRCh38 released mixed read lengths, antibody characterized with exemption ENCFF207YQO fastq reads ENCSR968GIB ChIP-seq EFO:0002067 K562 cell line Homo sapiens RFX1-human ENCAB000BCV DNA False 2016-09-20 ENCODE 3 1 100 paired-ended 2 ENCFF493EZE 4883811317 Michael Snyder, Stanford 756735e4f85cd27d151ef21d39fb47ce SRA:SRR5112321 https://www.encodeproject.org/files/ENCFF207YQO/@@download/ENCFF207YQO.fastq.gz Illumina HiSeq 4000 /files/ENCFF502GTS/ released mild to moderate bottlenecking, moderate library complexity ENCFF031QKW fastq reads ENCSR968GIB ChIP-seq EFO:0002067 K562 cell line Homo sapiens RFX1-human ENCAB000BCV DNA False 2016-09-20 ENCODE 4 1 100 paired-ended 1 ENCFF473RLY 3461784577 Michael Snyder, Stanford 3b3bd06148daf5cd0f377827467e790c SRA:SRR5112322 https://www.encodeproject.org/files/ENCFF031QKW/@@download/ENCFF031QKW.fastq.gz Illumina HiSeq 4000 /files/ENCFF259GQA/ released mild to moderate bottlenecking, moderate library complexity ENCFF473RLY fastq reads ENCSR968GIB ChIP-seq EFO:0002067 K562 cell line Homo sapiens RFX1-human ENCAB000BCV DNA False 2016-09-20 ENCODE 4 1 100 paired-ended 2 ENCFF031QKW 3867881851 Michael Snyder, Stanford 8091e30c9b51c158810665ac2319bb46 SRA:SRR5112322 https://www.encodeproject.org/files/ENCFF473RLY/@@download/ENCFF473RLY.fastq.gz Illumina HiSeq 4000 /files/ENCFF837MIV/ released mild to moderate bottlenecking, moderate library complexity ENCFF493EZE fastq reads ENCSR968GIB ChIP-seq EFO:0002067 K562 cell line Homo sapiens RFX1-human ENCAB000BCV DNA False 2016-09-20 ENCODE 3 1 100 paired-ended 1 ENCFF207YQO 4744630644 Michael Snyder, Stanford ce0534254079c60aff128718d001a7f3 SRA:SRR5112321 https://www.encodeproject.org/files/ENCFF493EZE/@@download/ENCFF493EZE.fastq.gz Illumina HiSeq 4000 /files/ENCFF498JMO/ released mild to moderate bottlenecking, moderate library complexity ENCFF626JTU bam unfiltered alignments ENCSR968GIB ChIP-seq EFO:0002067 K562 cell line Homo sapiens RFX1-human ENCAB000BCV DNA False 2016-09-20 ENCODE 4 100 ENCFF031QKW, ENCFF473RLY, ENCFF643CGH 6467383307 ENCODE Processing Pipeline 3c8462d343ce7855091ed76d3ffbb663 https://www.encodeproject.org/files/ENCFF626JTU/@@download/ENCFF626JTU.bam GRCh38 released mild to moderate bottlenecking, moderate library complexity ENCFF332PWQ bam unfiltered alignments ENCSR968GIB ChIP-seq EFO:0002067 K562 cell line Homo sapiens RFX1-human ENCAB000BCV DNA False 2016-09-20 ENCODE 4 100 ENCFF031QKW, ENCFF473RLY, ENCFF807MUK 6466107658 ENCODE Processing Pipeline 397dd209822f0fc91d2bedd6cc40caf9 https://www.encodeproject.org/files/ENCFF332PWQ/@@download/ENCFF332PWQ.bam hg19 released mild to moderate bottlenecking, moderate library complexity ENCFF259IST bam unfiltered alignments ENCSR968GIB ChIP-seq EFO:0002067 K562 cell line Homo sapiens RFX1-human ENCAB000BCV DNA False 2016-09-20 ENCODE 3 100 ENCFF207YQO, ENCFF493EZE, ENCFF643CGH 8328614823 ENCODE Processing Pipeline 481ac973f919db135a2e21f0be5b8ba6 https://www.encodeproject.org/files/ENCFF259IST/@@download/ENCFF259IST.bam GRCh38 released mild to moderate bottlenecking, moderate library complexity ENCFF831TYG bam unfiltered alignments ENCSR968GIB ChIP-seq EFO:0002067 K562 cell line Homo sapiens RFX1-human ENCAB000BCV DNA False 2016-09-20 ENCODE 3 100 ENCFF207YQO, ENCFF493EZE, ENCFF807MUK 8330123740 ENCODE Processing Pipeline 76448e167e80f4a28c1f61d6c9d31478 https://www.encodeproject.org/files/ENCFF831TYG/@@download/ENCFF831TYG.bam hg19 released mild to moderate bottlenecking, moderate library complexity ENCFF837ZOY bam alignments ENCSR968GIB ChIP-seq EFO:0002067 K562 cell line Homo sapiens RFX1-human ENCAB000BCV DNA False 2016-09-20 ENCODE 4 100 ENCFF031QKW, ENCFF473RLY, ENCFF643CGH 4276094016 ENCODE Processing Pipeline 09672b856805eab1fddb9f5baddc2ed2 https://www.encodeproject.org/files/ENCFF837ZOY/@@download/ENCFF837ZOY.bam GRCh38 released mild to moderate bottlenecking, moderate library complexity ENCFF368KYI bam alignments ENCSR968GIB ChIP-seq EFO:0002067 K562 cell line Homo sapiens RFX1-human ENCAB000BCV DNA False 2016-09-20 ENCODE 4 100 ENCFF031QKW, ENCFF473RLY, ENCFF807MUK 4271856692 ENCODE Processing Pipeline cbc301020f1ec24a5f54644b636f591d https://www.encodeproject.org/files/ENCFF368KYI/@@download/ENCFF368KYI.bam hg19 released mild to moderate bottlenecking, moderate library complexity ENCFF183MSQ bam alignments ENCSR968GIB ChIP-seq EFO:0002067 K562 cell line Homo sapiens RFX1-human ENCAB000BCV DNA False 2016-09-20 ENCODE 3 100 ENCFF207YQO, ENCFF493EZE, ENCFF643CGH 4749755609 ENCODE Processing Pipeline c6a04c0416fcf79a25922e0b7b2bfa1b https://www.encodeproject.org/files/ENCFF183MSQ/@@download/ENCFF183MSQ.bam GRCh38 released mild to moderate bottlenecking, moderate library complexity ENCFF090JBA bam alignments ENCSR968GIB ChIP-seq EFO:0002067 K562 cell line Homo sapiens RFX1-human ENCAB000BCV DNA False 2016-09-20 ENCODE 3 100 ENCFF207YQO, ENCFF493EZE, ENCFF807MUK 4745356928 ENCODE Processing Pipeline 821621910cf8cffcec17e4bd3078ca67 https://www.encodeproject.org/files/ENCFF090JBA/@@download/ENCFF090JBA.bam hg19 released mild to moderate bottlenecking, moderate library complexity ENCFF487AUU bigWig signal p-value ENCSR968GIB ChIP-seq EFO:0002067 K562 cell line Homo sapiens RFX1-human ENCAB000BCV DNA False 2016-09-20 ENCODE 3 ENCFF090JBA, ENCFF160VXC 1092945802 ENCODE Processing Pipeline a3b5ee33b6c349618d6622c4ba2b8047 https://www.encodeproject.org/files/ENCFF487AUU/@@download/ENCFF487AUU.bigWig hg19 released mild to moderate bottlenecking, moderate library complexity ENCFF566BZU bigWig signal p-value ENCSR968GIB ChIP-seq EFO:0002067 K562 cell line Homo sapiens RFX1-human ENCAB000BCV DNA False 2016-09-20 ENCODE 4 ENCFF368KYI, ENCFF834TUP 1332901853 ENCODE Processing Pipeline 776d9bf4573d0f5a11e06f4173c8d2aa https://www.encodeproject.org/files/ENCFF566BZU/@@download/ENCFF566BZU.bigWig hg19 released mild to moderate bottlenecking, moderate library complexity ENCFF583AGI bigWig signal p-value ENCSR968GIB ChIP-seq EFO:0002067 K562 cell line Homo sapiens RFX1-human ENCAB000BCV DNA False 2016-09-20 ENCODE 3, 4 ENCFF090JBA, ENCFF160VXC, ENCFF368KYI, ENCFF834TUP 1727375448 ENCODE Processing Pipeline fc86c6df8ba208b50ef97bc2dd7df706 https://www.encodeproject.org/files/ENCFF583AGI/@@download/ENCFF583AGI.bigWig hg19 released mild to moderate bottlenecking, moderate library complexity ENCFF829YQI bigWig fold change over control ENCSR968GIB ChIP-seq EFO:0002067 K562 cell line Homo sapiens RFX1-human ENCAB000BCV DNA False 2016-09-20 ENCODE 3 ENCFF090JBA, ENCFF160VXC 1497537252 ENCODE Processing Pipeline 17abc3b3b32cf5d94364bf90b85e043e https://www.encodeproject.org/files/ENCFF829YQI/@@download/ENCFF829YQI.bigWig hg19 released mild to moderate bottlenecking, moderate library complexity ENCFF848HPN bigWig fold change over control ENCSR968GIB ChIP-seq EFO:0002067 K562 cell line Homo sapiens RFX1-human ENCAB000BCV DNA False 2016-09-20 ENCODE 4 ENCFF368KYI, ENCFF834TUP 1416485257 ENCODE Processing Pipeline 35e109cb473949311a7f53020edc182e https://www.encodeproject.org/files/ENCFF848HPN/@@download/ENCFF848HPN.bigWig hg19 released mild to moderate bottlenecking, moderate library complexity ENCFF156KTG bigWig fold change over control ENCSR968GIB ChIP-seq EFO:0002067 K562 cell line Homo sapiens RFX1-human ENCAB000BCV DNA False 2016-09-20 ENCODE 3, 4 ENCFF090JBA, ENCFF160VXC, ENCFF368KYI, ENCFF834TUP 2402920445 ENCODE Processing Pipeline 0055723b23ac2d02a2da5aece5520f9d https://www.encodeproject.org/files/ENCFF156KTG/@@download/ENCFF156KTG.bigWig hg19 released mild to moderate bottlenecking, moderate library complexity ENCFF786DOF bed narrowPeak peaks ENCSR968GIB ChIP-seq EFO:0002067 K562 cell line Homo sapiens RFX1-human ENCAB000BCV DNA False 2016-09-20 ENCODE 3 ENCFF090JBA, ENCFF160VXC 6967101 ENCODE Processing Pipeline 2ec38696cf24579860c517913f038387 https://www.encodeproject.org/files/ENCFF786DOF/@@download/ENCFF786DOF.bed.gz hg19 released mild to moderate bottlenecking, moderate library complexity ENCFF733TAS bed narrowPeak peaks ENCSR968GIB ChIP-seq EFO:0002067 K562 cell line Homo sapiens RFX1-human ENCAB000BCV DNA False 2016-09-20 ENCODE 4 ENCFF368KYI, ENCFF834TUP 7027912 ENCODE Processing Pipeline 0de62bf87fc85a4410f6e86e79d8876a https://www.encodeproject.org/files/ENCFF733TAS/@@download/ENCFF733TAS.bed.gz hg19 released mild to moderate bottlenecking, moderate library complexity ENCFF163OZR bed narrowPeak peaks ENCSR968GIB ChIP-seq EFO:0002067 K562 cell line Homo sapiens RFX1-human ENCAB000BCV DNA False 2016-09-20 ENCODE 3, 4 ENCFF090JBA, ENCFF160VXC, ENCFF368KYI, ENCFF834TUP 7224661 ENCODE Processing Pipeline a9fccfe8c2260b5662877651118d1aa9 https://www.encodeproject.org/files/ENCFF163OZR/@@download/ENCFF163OZR.bed.gz hg19 released mild to moderate bottlenecking, moderate library complexity ENCFF635JCW bigBed narrowPeak peaks ENCSR968GIB ChIP-seq EFO:0002067 K562 cell line Homo sapiens RFX1-human ENCAB000BCV DNA False 2016-09-20 ENCODE 3 ENCFF786DOF 13119652 ENCODE Processing Pipeline b6dfeed00588c34404a2597df0f4c434 https://www.encodeproject.org/files/ENCFF635JCW/@@download/ENCFF635JCW.bigBed hg19 released mild to moderate bottlenecking, moderate library complexity ENCFF246RYT bigBed narrowPeak peaks ENCSR968GIB ChIP-seq EFO:0002067 K562 cell line Homo sapiens RFX1-human ENCAB000BCV DNA False 2016-09-20 ENCODE 4 ENCFF733TAS 13415790 ENCODE Processing Pipeline fce384c90c967987213cbb9ba2980c33 https://www.encodeproject.org/files/ENCFF246RYT/@@download/ENCFF246RYT.bigBed hg19 released mild to moderate bottlenecking, moderate library complexity ENCFF611GXL bed narrowPeak conservative idr thresholded peaks ENCSR968GIB ChIP-seq EFO:0002067 K562 cell line Homo sapiens RFX1-human ENCAB000BCV DNA False 2016-09-20 ENCODE 3, 4 ENCFF001TDO, ENCFF163OZR, ENCFF733TAS, ENCFF786DOF 287523 ENCODE Processing Pipeline 22441bf22be6ca6c34b085ed0459afb1 https://www.encodeproject.org/files/ENCFF611GXL/@@download/ENCFF611GXL.bed.gz hg19 released mild to moderate bottlenecking, moderate library complexity ENCFF889OKT bigBed narrowPeak conservative idr thresholded peaks ENCSR968GIB ChIP-seq EFO:0002067 K562 cell line Homo sapiens RFX1-human ENCAB000BCV DNA False 2016-09-20 ENCODE 3, 4 ENCFF611GXL 587629 ENCODE Processing Pipeline 8439b1340e1091d5870fa540b89e2fc3 https://www.encodeproject.org/files/ENCFF889OKT/@@download/ENCFF889OKT.bigBed hg19 released mild to moderate bottlenecking, moderate library complexity ENCFF586NMI bigBed narrowPeak peaks ENCSR968GIB ChIP-seq EFO:0002067 K562 cell line Homo sapiens RFX1-human ENCAB000BCV DNA False 2016-09-20 ENCODE 3, 4 ENCFF163OZR 13357074 ENCODE Processing Pipeline f56d7a890919e15b86ac2bf65edea0b6 https://www.encodeproject.org/files/ENCFF586NMI/@@download/ENCFF586NMI.bigBed hg19 released mild to moderate bottlenecking, moderate library complexity ENCFF010UHD bed narrowPeak optimal idr thresholded peaks ENCSR968GIB ChIP-seq EFO:0002067 K562 cell line Homo sapiens RFX1-human ENCAB000BCV DNA False 2016-09-20 ENCODE 3, 4 ENCFF001TDO, ENCFF163OZR, ENCFF733TAS, ENCFF786DOF 347670 ENCODE Processing Pipeline 807a6c046733e6afc5f75fcff16832d9 https://www.encodeproject.org/files/ENCFF010UHD/@@download/ENCFF010UHD.bed.gz hg19 released mild to moderate bottlenecking, moderate library complexity ENCFF879XKB bigBed narrowPeak optimal idr thresholded peaks ENCSR968GIB ChIP-seq EFO:0002067 K562 cell line Homo sapiens RFX1-human ENCAB000BCV DNA False 2016-09-20 ENCODE 3, 4 ENCFF010UHD 673307 ENCODE Processing Pipeline c8e90639444e45e005c116a7d0827f98 https://www.encodeproject.org/files/ENCFF879XKB/@@download/ENCFF879XKB.bigBed hg19 released mild to moderate bottlenecking, moderate library complexity ENCFF563GQI bigWig signal p-value ENCSR968GIB ChIP-seq EFO:0002067 K562 cell line Homo sapiens RFX1-human ENCAB000BCV DNA False 2016-09-20 ENCODE 3 ENCFF183MSQ, ENCFF790TAN 1438920886 ENCODE Processing Pipeline 263e1d5bdacad2d79384c8d5c6c9a446 https://www.encodeproject.org/files/ENCFF563GQI/@@download/ENCFF563GQI.bigWig GRCh38 released mild to moderate bottlenecking, moderate library complexity ENCFF743UIZ bigWig signal p-value ENCSR968GIB ChIP-seq EFO:0002067 K562 cell line Homo sapiens RFX1-human ENCAB000BCV DNA False 2016-09-20 ENCODE 4 ENCFF712WXB, ENCFF837ZOY 1116850749 ENCODE Processing Pipeline 2fdbe19ff464b873c3cdef5b5d2fc0bf https://www.encodeproject.org/files/ENCFF743UIZ/@@download/ENCFF743UIZ.bigWig GRCh38 released mild to moderate bottlenecking, moderate library complexity ENCFF317LLL bigWig signal p-value ENCSR968GIB ChIP-seq EFO:0002067 K562 cell line Homo sapiens RFX1-human ENCAB000BCV DNA False 2016-09-20 ENCODE 3, 4 ENCFF183MSQ, ENCFF712WXB, ENCFF790TAN, ENCFF837ZOY 2022954003 ENCODE Processing Pipeline a1bb53af8fce1cb41d58575fcaac2f1b https://www.encodeproject.org/files/ENCFF317LLL/@@download/ENCFF317LLL.bigWig GRCh38 released mild to moderate bottlenecking, moderate library complexity ENCFF410AVV bigWig fold change over control ENCSR968GIB ChIP-seq EFO:0002067 K562 cell line Homo sapiens RFX1-human ENCAB000BCV DNA False 2016-09-20 ENCODE 3 ENCFF183MSQ, ENCFF790TAN 1482736499 ENCODE Processing Pipeline 4a4a723e5de39915f33446fde14ec9ba https://www.encodeproject.org/files/ENCFF410AVV/@@download/ENCFF410AVV.bigWig GRCh38 released mild to moderate bottlenecking, moderate library complexity ENCFF414QES bigWig fold change over control ENCSR968GIB ChIP-seq EFO:0002067 K562 cell line Homo sapiens RFX1-human ENCAB000BCV DNA False 2016-09-20 ENCODE 4 ENCFF712WXB, ENCFF837ZOY 1419720240 ENCODE Processing Pipeline b5eddc667ebfa60f1a3141799e8494ce https://www.encodeproject.org/files/ENCFF414QES/@@download/ENCFF414QES.bigWig GRCh38 released mild to moderate bottlenecking, moderate library complexity ENCFF825MVK bigWig fold change over control ENCSR968GIB ChIP-seq EFO:0002067 K562 cell line Homo sapiens RFX1-human ENCAB000BCV DNA False 2016-09-20 ENCODE 3, 4 ENCFF183MSQ, ENCFF712WXB, ENCFF790TAN, ENCFF837ZOY 2391879486 ENCODE Processing Pipeline 2568a2becc259e06d42fde594e2b183d https://www.encodeproject.org/files/ENCFF825MVK/@@download/ENCFF825MVK.bigWig GRCh38 released mild to moderate bottlenecking, moderate library complexity ENCFF723NUH bed narrowPeak peaks ENCSR968GIB ChIP-seq EFO:0002067 K562 cell line Homo sapiens RFX1-human ENCAB000BCV DNA False 2016-09-20 ENCODE 4 ENCFF712WXB, ENCFF837ZOY 6927636 ENCODE Processing Pipeline 50b72f86c2ddd1a3f5b23e880571f659 https://www.encodeproject.org/files/ENCFF723NUH/@@download/ENCFF723NUH.bed.gz GRCh38 released mild to moderate bottlenecking, moderate library complexity ENCFF895ELG bigBed narrowPeak peaks ENCSR968GIB ChIP-seq EFO:0002067 K562 cell line Homo sapiens RFX1-human ENCAB000BCV DNA False 2016-09-20 ENCODE 3 ENCFF858GQK 13140425 ENCODE Processing Pipeline 9b40d6fe0cea1f1c26e207c7b292f51e https://www.encodeproject.org/files/ENCFF895ELG/@@download/ENCFF895ELG.bigBed GRCh38 released mild to moderate bottlenecking, moderate library complexity ENCFF858GQK bed narrowPeak peaks ENCSR968GIB ChIP-seq EFO:0002067 K562 cell line Homo sapiens RFX1-human ENCAB000BCV DNA False 2016-09-20 ENCODE 3 ENCFF183MSQ, ENCFF790TAN 6899844 ENCODE Processing Pipeline 1031ecab66d9941b0d15fd56a681f7a2 https://www.encodeproject.org/files/ENCFF858GQK/@@download/ENCFF858GQK.bed.gz GRCh38 released mild to moderate bottlenecking, moderate library complexity ENCFF588ASX bed narrowPeak peaks ENCSR968GIB ChIP-seq EFO:0002067 K562 cell line Homo sapiens RFX1-human ENCAB000BCV DNA False 2016-09-20 ENCODE 3, 4 ENCFF183MSQ, ENCFF712WXB, ENCFF790TAN, ENCFF837ZOY 7224266 ENCODE Processing Pipeline ffa4df8f56c55c46bb63e637cd24d587 https://www.encodeproject.org/files/ENCFF588ASX/@@download/ENCFF588ASX.bed.gz GRCh38 released mild to moderate bottlenecking, moderate library complexity ENCFF246MSN bigBed narrowPeak peaks ENCSR968GIB ChIP-seq EFO:0002067 K562 cell line Homo sapiens RFX1-human ENCAB000BCV DNA False 2016-09-20 ENCODE 4 ENCFF723NUH 13403071 ENCODE Processing Pipeline 85c95e273fea526a6f6dc5e0530bb705 https://www.encodeproject.org/files/ENCFF246MSN/@@download/ENCFF246MSN.bigBed GRCh38 released mild to moderate bottlenecking, moderate library complexity ENCFF667ANE bed narrowPeak conservative idr thresholded peaks ENCSR968GIB ChIP-seq EFO:0002067 K562 cell line Homo sapiens RFX1-human ENCAB000BCV DNA False 2016-09-20 ENCODE 3, 4 ENCFF419RSJ, ENCFF588ASX, ENCFF723NUH, ENCFF858GQK 289670 ENCODE Processing Pipeline 563feef21f0c506f338e36723cef44e2 https://www.encodeproject.org/files/ENCFF667ANE/@@download/ENCFF667ANE.bed.gz GRCh38 released mild to moderate bottlenecking, moderate library complexity ENCFF193PVX bed narrowPeak optimal idr thresholded peaks ENCSR968GIB ChIP-seq EFO:0002067 K562 cell line Homo sapiens RFX1-human ENCAB000BCV DNA False 2016-09-20 ENCODE 3, 4 ENCFF419RSJ, ENCFF588ASX, ENCFF723NUH, ENCFF858GQK 351650 ENCODE Processing Pipeline 2a7a796c41def255c0a3425c32550198 https://www.encodeproject.org/files/ENCFF193PVX/@@download/ENCFF193PVX.bed.gz GRCh38 released mild to moderate bottlenecking, moderate library complexity ENCFF093IOY bigBed narrowPeak peaks ENCSR968GIB ChIP-seq EFO:0002067 K562 cell line Homo sapiens RFX1-human ENCAB000BCV DNA False 2016-09-20 ENCODE 3, 4 ENCFF588ASX 13373117 ENCODE Processing Pipeline a093b47acc0dd20bc10477267ef9ea4d https://www.encodeproject.org/files/ENCFF093IOY/@@download/ENCFF093IOY.bigBed GRCh38 released mild to moderate bottlenecking, moderate library complexity ENCFF976LFS bigBed narrowPeak optimal idr thresholded peaks ENCSR968GIB ChIP-seq EFO:0002067 K562 cell line Homo sapiens RFX1-human ENCAB000BCV DNA False 2016-09-20 ENCODE 3, 4 ENCFF193PVX 682224 ENCODE Processing Pipeline 462a213be30fb46dcb180f68dab5847c https://www.encodeproject.org/files/ENCFF976LFS/@@download/ENCFF976LFS.bigBed GRCh38 released mild to moderate bottlenecking, moderate library complexity ENCFF103JDW bigBed narrowPeak conservative idr thresholded peaks ENCSR968GIB ChIP-seq EFO:0002067 K562 cell line Homo sapiens RFX1-human ENCAB000BCV DNA False 2016-09-20 ENCODE 3, 4 ENCFF667ANE 594066 ENCODE Processing Pipeline 8f36c2bbd220df1b19ead7d23632b4ba https://www.encodeproject.org/files/ENCFF103JDW/@@download/ENCFF103JDW.bigBed GRCh38 released mild to moderate bottlenecking, moderate library complexity ENCFF103CMT bam unfiltered alignments ENCSR654CQU ChIP-seq EFO:0002067 K562 cell line Homo sapiens SNIP1-human ENCAB027LVC DNA False 2017-06-23 ENCODE 2 100 ENCFF663NBI, ENCFF667DGY, ENCFF807MUK 5385542966 ENCODE Processing Pipeline 081a7e02ad329e1605f7a80e38b8ec61 https://www.encodeproject.org/files/ENCFF103CMT/@@download/ENCFF103CMT.bam hg19 released low read depth, mild to moderate bottlenecking missing control alignments ENCFF969SFM bam unfiltered alignments ENCSR654CQU ChIP-seq EFO:0002067 K562 cell line Homo sapiens SNIP1-human ENCAB027LVC DNA False 2017-06-23 ENCODE 1 100 ENCFF165NMW, ENCFF411TJB, ENCFF807MUK 4824020395 ENCODE Processing Pipeline ff9b75efa3f915f6cb5a1dd6c5f28c6f https://www.encodeproject.org/files/ENCFF969SFM/@@download/ENCFF969SFM.bam hg19 released low read depth, mild to moderate bottlenecking missing control alignments ENCFF411TJB fastq reads ENCSR654CQU ChIP-seq EFO:0002067 K562 cell line Homo sapiens SNIP1-human ENCAB027LVC DNA False 2017-06-23 ENCODE 1 1 100 paired-ended 2 ENCFF165NMW 2254923623 Michael Snyder, Stanford f15814cddc5049ec36dc1ecf78742f12 SRA:SRR6213491 https://www.encodeproject.org/files/ENCFF411TJB/@@download/ENCFF411TJB.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFH/ released low read depth, mild to moderate bottlenecking missing control alignments ENCFF663NBI fastq reads ENCSR654CQU ChIP-seq EFO:0002067 K562 cell line Homo sapiens SNIP1-human ENCAB027LVC DNA False 2017-06-23 ENCODE 2 1 100 paired-ended 1 ENCFF667DGY 2543386565 Michael Snyder, Stanford bf133ce0bfe9c771811974e7ffec68f3 SRA:SRR6213492 https://www.encodeproject.org/files/ENCFF663NBI/@@download/ENCFF663NBI.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFD/ released low read depth, mild to moderate bottlenecking missing control alignments ENCFF165NMW fastq reads ENCSR654CQU ChIP-seq EFO:0002067 K562 cell line Homo sapiens SNIP1-human ENCAB027LVC DNA False 2017-06-23 ENCODE 1 1 100 paired-ended 1 ENCFF411TJB 2160311489 Michael Snyder, Stanford 90163a2618e2b09cf3a9ef34d8faa83a SRA:SRR6213491 https://www.encodeproject.org/files/ENCFF165NMW/@@download/ENCFF165NMW.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFF/ released low read depth, mild to moderate bottlenecking missing control alignments ENCFF667DGY fastq reads ENCSR654CQU ChIP-seq EFO:0002067 K562 cell line Homo sapiens SNIP1-human ENCAB027LVC DNA False 2017-06-23 ENCODE 2 1 100 paired-ended 2 ENCFF663NBI 2512281033 Michael Snyder, Stanford 27b4b5f98c1c4c2765763ba17ebebfd9 SRA:SRR6213492 https://www.encodeproject.org/files/ENCFF667DGY/@@download/ENCFF667DGY.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFA/ released low read depth, mild to moderate bottlenecking missing control alignments ENCFF564MED bam alignments ENCSR654CQU ChIP-seq EFO:0002067 K562 cell line Homo sapiens SNIP1-human ENCAB027LVC DNA False 2017-06-23 ENCODE 2 100 ENCFF663NBI, ENCFF667DGY, ENCFF807MUK 4004727318 ENCODE Processing Pipeline fb1e494f5b94f6d8eb6e0cd6200e9943 https://www.encodeproject.org/files/ENCFF564MED/@@download/ENCFF564MED.bam hg19 released low read depth, mild to moderate bottlenecking missing control alignments ENCFF079ISN bam alignments ENCSR654CQU ChIP-seq EFO:0002067 K562 cell line Homo sapiens SNIP1-human ENCAB027LVC DNA False 2017-06-23 ENCODE 1 100 ENCFF165NMW, ENCFF411TJB, ENCFF807MUK 3454448161 ENCODE Processing Pipeline 5a22116e6b9fdd774bd37460381a9d29 https://www.encodeproject.org/files/ENCFF079ISN/@@download/ENCFF079ISN.bam hg19 released low read depth, mild to moderate bottlenecking missing control alignments ENCFF288GNC bigWig signal p-value ENCSR654CQU ChIP-seq EFO:0002067 K562 cell line Homo sapiens SNIP1-human ENCAB027LVC DNA False 2017-06-23 ENCODE 1 ENCFF079ISN, ENCFF581ZJL 1057770002 ENCODE Processing Pipeline 48cbfbca191618e65744c4db4141140e https://www.encodeproject.org/files/ENCFF288GNC/@@download/ENCFF288GNC.bigWig hg19 released low read depth, mild to moderate bottlenecking missing control alignments ENCFF557WFH bigWig signal p-value ENCSR654CQU ChIP-seq EFO:0002067 K562 cell line Homo sapiens SNIP1-human ENCAB027LVC DNA False 2017-06-23 ENCODE 2 ENCFF051LWI, ENCFF564MED 1043533993 ENCODE Processing Pipeline 7f7032acdc8bf0967d63f2c525036494 https://www.encodeproject.org/files/ENCFF557WFH/@@download/ENCFF557WFH.bigWig hg19 released low read depth, mild to moderate bottlenecking missing control alignments ENCFF765KWG bigWig signal p-value ENCSR654CQU ChIP-seq EFO:0002067 K562 cell line Homo sapiens SNIP1-human ENCAB027LVC DNA False 2017-06-23 ENCODE 1, 2 ENCFF051LWI, ENCFF079ISN, ENCFF564MED, ENCFF581ZJL 1832436405 ENCODE Processing Pipeline 57af81071e885b1745ebf2aa2a10c907 https://www.encodeproject.org/files/ENCFF765KWG/@@download/ENCFF765KWG.bigWig hg19 released low read depth, mild to moderate bottlenecking missing control alignments ENCFF356PTU bigWig fold change over control ENCSR654CQU ChIP-seq EFO:0002067 K562 cell line Homo sapiens SNIP1-human ENCAB027LVC DNA False 2017-06-23 ENCODE 1 ENCFF079ISN, ENCFF581ZJL 1052125504 ENCODE Processing Pipeline 734a2a84f63d1184389f1730429a5c52 https://www.encodeproject.org/files/ENCFF356PTU/@@download/ENCFF356PTU.bigWig hg19 released low read depth, mild to moderate bottlenecking missing control alignments ENCFF387NCI bigWig fold change over control ENCSR654CQU ChIP-seq EFO:0002067 K562 cell line Homo sapiens SNIP1-human ENCAB027LVC DNA False 2017-06-23 ENCODE 2 ENCFF051LWI, ENCFF564MED 1047730699 ENCODE Processing Pipeline 06361551a2821ff1a1e51f30e24b330b https://www.encodeproject.org/files/ENCFF387NCI/@@download/ENCFF387NCI.bigWig hg19 released low read depth, mild to moderate bottlenecking missing control alignments ENCFF673WUS bigWig fold change over control ENCSR654CQU ChIP-seq EFO:0002067 K562 cell line Homo sapiens SNIP1-human ENCAB027LVC DNA False 2017-06-23 ENCODE 1, 2 ENCFF051LWI, ENCFF079ISN, ENCFF564MED, ENCFF581ZJL 1981862957 ENCODE Processing Pipeline a0c3fb15a53acb018ba933ff6e70e0ba https://www.encodeproject.org/files/ENCFF673WUS/@@download/ENCFF673WUS.bigWig hg19 released low read depth, mild to moderate bottlenecking missing control alignments ENCFF842STK bed narrowPeak peaks ENCSR654CQU ChIP-seq EFO:0002067 K562 cell line Homo sapiens SNIP1-human ENCAB027LVC DNA False 2017-06-23 ENCODE 2 ENCFF051LWI, ENCFF564MED 5744360 ENCODE Processing Pipeline dd0c6deb8ecd5d8954ff908d0cda5c4f https://www.encodeproject.org/files/ENCFF842STK/@@download/ENCFF842STK.bed.gz hg19 released low read depth, mild to moderate bottlenecking missing control alignments ENCFF363FXM bed narrowPeak peaks ENCSR654CQU ChIP-seq EFO:0002067 K562 cell line Homo sapiens SNIP1-human ENCAB027LVC DNA False 2017-06-23 ENCODE 1 ENCFF079ISN, ENCFF581ZJL 6046627 ENCODE Processing Pipeline 668b680c249969f3157acbe573a4627e https://www.encodeproject.org/files/ENCFF363FXM/@@download/ENCFF363FXM.bed.gz hg19 released low read depth, mild to moderate bottlenecking missing control alignments ENCFF330YNZ bigBed narrowPeak peaks ENCSR654CQU ChIP-seq EFO:0002067 K562 cell line Homo sapiens SNIP1-human ENCAB027LVC DNA False 2017-06-23 ENCODE 1 ENCFF363FXM 11329441 ENCODE Processing Pipeline 2ef777b9b029ee94dd96c05329a47561 https://www.encodeproject.org/files/ENCFF330YNZ/@@download/ENCFF330YNZ.bigBed hg19 released low read depth, mild to moderate bottlenecking missing control alignments ENCFF344ACD bigBed narrowPeak peaks ENCSR654CQU ChIP-seq EFO:0002067 K562 cell line Homo sapiens SNIP1-human ENCAB027LVC DNA False 2017-06-23 ENCODE 1, 2 ENCFF039BZL 11213190 ENCODE Processing Pipeline 12a2f2262cef2d5624356c77435d84b5 https://www.encodeproject.org/files/ENCFF344ACD/@@download/ENCFF344ACD.bigBed hg19 released low read depth, mild to moderate bottlenecking missing control alignments ENCFF519BHR bigBed narrowPeak peaks ENCSR654CQU ChIP-seq EFO:0002067 K562 cell line Homo sapiens SNIP1-human ENCAB027LVC DNA False 2017-06-23 ENCODE 2 ENCFF842STK 11267942 ENCODE Processing Pipeline ac338aca70b7da3b66af360a6f5ae83f https://www.encodeproject.org/files/ENCFF519BHR/@@download/ENCFF519BHR.bigBed hg19 released low read depth, mild to moderate bottlenecking missing control alignments ENCFF039BZL bed narrowPeak peaks ENCSR654CQU ChIP-seq EFO:0002067 K562 cell line Homo sapiens SNIP1-human ENCAB027LVC DNA False 2017-06-23 ENCODE 1, 2 ENCFF051LWI, ENCFF079ISN, ENCFF564MED, ENCFF581ZJL 7008942 ENCODE Processing Pipeline fb9d2f5bd12e39ed8efb1d32b5c0ddc1 https://www.encodeproject.org/files/ENCFF039BZL/@@download/ENCFF039BZL.bed.gz hg19 released low read depth, mild to moderate bottlenecking missing control alignments ENCFF998KXK bam unfiltered alignments ENCSR654CQU ChIP-seq EFO:0002067 K562 cell line Homo sapiens SNIP1-human ENCAB027LVC DNA False 2017-06-23 ENCODE 1 100 ENCFF165NMW, ENCFF411TJB, ENCFF643CGH 4829132725 ENCODE Processing Pipeline 0b66eb4f97cb07638255de3a54165c73 https://www.encodeproject.org/files/ENCFF998KXK/@@download/ENCFF998KXK.bam GRCh38 released low read depth, mild to moderate bottlenecking missing control alignments ENCFF203EVC bam unfiltered alignments ENCSR654CQU ChIP-seq EFO:0002067 K562 cell line Homo sapiens SNIP1-human ENCAB027LVC DNA False 2017-06-23 ENCODE 2 100 ENCFF643CGH, ENCFF663NBI, ENCFF667DGY 5389763813 ENCODE Processing Pipeline 75831cb5cee19f7eeb65b07eebbfaf6f https://www.encodeproject.org/files/ENCFF203EVC/@@download/ENCFF203EVC.bam GRCh38 released low read depth, mild to moderate bottlenecking missing control alignments ENCFF519OGB bam alignments ENCSR654CQU ChIP-seq EFO:0002067 K562 cell line Homo sapiens SNIP1-human ENCAB027LVC DNA False 2017-06-23 ENCODE 1 100 ENCFF165NMW, ENCFF411TJB, ENCFF643CGH 3455947623 ENCODE Processing Pipeline 77f9a1cdcabe935b7670481f47818324 https://www.encodeproject.org/files/ENCFF519OGB/@@download/ENCFF519OGB.bam GRCh38 released low read depth, mild to moderate bottlenecking missing control alignments ENCFF883BFY bam alignments ENCSR654CQU ChIP-seq EFO:0002067 K562 cell line Homo sapiens SNIP1-human ENCAB027LVC DNA False 2017-06-23 ENCODE 2 100 ENCFF643CGH, ENCFF663NBI, ENCFF667DGY 4005623520 ENCODE Processing Pipeline d649be16a109e60c79a897b9305baf17 https://www.encodeproject.org/files/ENCFF883BFY/@@download/ENCFF883BFY.bam GRCh38 released low read depth, mild to moderate bottlenecking missing control alignments ENCFF124OYN bigWig signal p-value ENCSR654CQU ChIP-seq EFO:0002067 K562 cell line Homo sapiens SNIP1-human ENCAB027LVC DNA False 2017-06-23 ENCODE 1 ENCFF519OGB 951537472 ENCODE Processing Pipeline cbd61f18148ba63cf3c3b9e462a4c052 https://www.encodeproject.org/files/ENCFF124OYN/@@download/ENCFF124OYN.bigWig GRCh38 released low read depth, mild to moderate bottlenecking missing control alignments ENCFF956HBR bigWig signal p-value ENCSR654CQU ChIP-seq EFO:0002067 K562 cell line Homo sapiens SNIP1-human ENCAB027LVC DNA False 2017-06-23 ENCODE 2 ENCFF883BFY 1108234482 ENCODE Processing Pipeline 26cf5cd32bdc8cb4d19bdf0ea00fd40e https://www.encodeproject.org/files/ENCFF956HBR/@@download/ENCFF956HBR.bigWig GRCh38 released low read depth, mild to moderate bottlenecking missing control alignments ENCFF660YRA bigWig signal p-value ENCSR654CQU ChIP-seq EFO:0002067 K562 cell line Homo sapiens SNIP1-human ENCAB027LVC DNA False 2017-06-23 ENCODE 1, 2 ENCFF519OGB, ENCFF883BFY 1601181529 ENCODE Processing Pipeline 21c5b13b2127979a5ca24bf5154f28c5 https://www.encodeproject.org/files/ENCFF660YRA/@@download/ENCFF660YRA.bigWig GRCh38 released low read depth, mild to moderate bottlenecking missing control alignments ENCFF041SHP bigWig fold change over control ENCSR654CQU ChIP-seq EFO:0002067 K562 cell line Homo sapiens SNIP1-human ENCAB027LVC DNA False 2017-06-23 ENCODE 1 ENCFF519OGB 1053282869 ENCODE Processing Pipeline 07fdad7e576162bbe91cad80131ac627 https://www.encodeproject.org/files/ENCFF041SHP/@@download/ENCFF041SHP.bigWig GRCh38 released low read depth, mild to moderate bottlenecking missing control alignments ENCFF437WOC bigWig fold change over control ENCSR654CQU ChIP-seq EFO:0002067 K562 cell line Homo sapiens SNIP1-human ENCAB027LVC DNA False 2017-06-23 ENCODE 2 ENCFF883BFY 1030928226 ENCODE Processing Pipeline b802905e2f2ab8b07276119da0acc208 https://www.encodeproject.org/files/ENCFF437WOC/@@download/ENCFF437WOC.bigWig GRCh38 released low read depth, mild to moderate bottlenecking missing control alignments ENCFF996AGB bigWig fold change over control ENCSR654CQU ChIP-seq EFO:0002067 K562 cell line Homo sapiens SNIP1-human ENCAB027LVC DNA False 2017-06-23 ENCODE 1, 2 ENCFF519OGB, ENCFF883BFY 1974182853 ENCODE Processing Pipeline 410541d5dec0d0a0619b15864d075afd https://www.encodeproject.org/files/ENCFF996AGB/@@download/ENCFF996AGB.bigWig GRCh38 released low read depth, mild to moderate bottlenecking missing control alignments ENCFF119UAI bed narrowPeak peaks ENCSR654CQU ChIP-seq EFO:0002067 K562 cell line Homo sapiens SNIP1-human ENCAB027LVC DNA False 2017-06-23 ENCODE 1 ENCFF519OGB 5872244 ENCODE Processing Pipeline 8db5f2a2a0fb3522e9f6e54ef6187ea0 https://www.encodeproject.org/files/ENCFF119UAI/@@download/ENCFF119UAI.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking missing control alignments ENCFF839ELV bed narrowPeak peaks ENCSR654CQU ChIP-seq EFO:0002067 K562 cell line Homo sapiens SNIP1-human ENCAB027LVC DNA False 2017-06-23 ENCODE 1, 2 ENCFF519OGB, ENCFF883BFY 6945062 ENCODE Processing Pipeline 19fe4186d00de02326eef7137fd72fa4 https://www.encodeproject.org/files/ENCFF839ELV/@@download/ENCFF839ELV.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking missing control alignments ENCFF367UIC bed narrowPeak peaks ENCSR654CQU ChIP-seq EFO:0002067 K562 cell line Homo sapiens SNIP1-human ENCAB027LVC DNA False 2017-06-23 ENCODE 2 ENCFF883BFY 5633886 ENCODE Processing Pipeline 71c8cb1bf04cf83b2941b2c6b7c55478 https://www.encodeproject.org/files/ENCFF367UIC/@@download/ENCFF367UIC.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking missing control alignments ENCFF690WDI bigBed narrowPeak peaks ENCSR654CQU ChIP-seq EFO:0002067 K562 cell line Homo sapiens SNIP1-human ENCAB027LVC DNA False 2017-06-23 ENCODE 1 ENCFF119UAI 11325272 ENCODE Processing Pipeline 537a91b1ae14395b33f072ddb2419ee6 https://www.encodeproject.org/files/ENCFF690WDI/@@download/ENCFF690WDI.bigBed GRCh38 released low read depth, mild to moderate bottlenecking missing control alignments ENCFF437IZE bigBed narrowPeak peaks ENCSR654CQU ChIP-seq EFO:0002067 K562 cell line Homo sapiens SNIP1-human ENCAB027LVC DNA False 2017-06-23 ENCODE 2 ENCFF367UIC 11257755 ENCODE Processing Pipeline 5ae29af0f7a38c756d5fcf5417f5df30 https://www.encodeproject.org/files/ENCFF437IZE/@@download/ENCFF437IZE.bigBed GRCh38 released low read depth, mild to moderate bottlenecking missing control alignments ENCFF736XCL bigBed narrowPeak peaks ENCSR654CQU ChIP-seq EFO:0002067 K562 cell line Homo sapiens SNIP1-human ENCAB027LVC DNA False 2017-06-23 ENCODE 1, 2 ENCFF839ELV 11230854 ENCODE Processing Pipeline e16cbd79935cf9eecde8d06104e3acfe https://www.encodeproject.org/files/ENCFF736XCL/@@download/ENCFF736XCL.bigBed GRCh38 released low read depth, mild to moderate bottlenecking missing control alignments ENCFF910CNE bigBed narrowPeak conservative idr thresholded peaks ENCSR654CQU ChIP-seq EFO:0002067 K562 cell line Homo sapiens SNIP1-human ENCAB027LVC DNA False 2017-06-23 ENCODE 1, 2 ENCFF117NUA 116220 ENCODE Processing Pipeline 38313cda1334174a53b44bf09c924a54 https://www.encodeproject.org/files/ENCFF910CNE/@@download/ENCFF910CNE.bigBed GRCh38 released low read depth, mild to moderate bottlenecking missing control alignments ENCFF117NUA bed narrowPeak conservative idr thresholded peaks ENCSR654CQU ChIP-seq EFO:0002067 K562 cell line Homo sapiens SNIP1-human ENCAB027LVC DNA False 2017-06-23 ENCODE 1, 2 ENCFF119UAI, ENCFF367UIC, ENCFF419RSJ, ENCFF839ELV 33462 ENCODE Processing Pipeline e11efa9b930efb873e3b402797ecfc18 https://www.encodeproject.org/files/ENCFF117NUA/@@download/ENCFF117NUA.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking missing control alignments ENCFF529BDW bed narrowPeak optimal idr thresholded peaks ENCSR654CQU ChIP-seq EFO:0002067 K562 cell line Homo sapiens SNIP1-human ENCAB027LVC DNA False 2017-06-23 ENCODE 1, 2 ENCFF119UAI, ENCFF367UIC, ENCFF419RSJ, ENCFF839ELV 60816 ENCODE Processing Pipeline e9fcadd120f9c7e249d1df3815f3612a https://www.encodeproject.org/files/ENCFF529BDW/@@download/ENCFF529BDW.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking missing control alignments ENCFF323UOG bigBed narrowPeak optimal idr thresholded peaks ENCSR654CQU ChIP-seq EFO:0002067 K562 cell line Homo sapiens SNIP1-human ENCAB027LVC DNA False 2017-06-23 ENCODE 1, 2 ENCFF529BDW 157034 ENCODE Processing Pipeline ca9ad0150a5915c5cf7a5991c59514e2 https://www.encodeproject.org/files/ENCFF323UOG/@@download/ENCFF323UOG.bigBed GRCh38 released low read depth, mild to moderate bottlenecking missing control alignments ENCFF808IJO bigBed narrowPeak optimal idr thresholded peaks ENCSR654CQU ChIP-seq EFO:0002067 K562 cell line Homo sapiens SNIP1-human ENCAB027LVC DNA False 2017-06-23 ENCODE 1, 2 ENCFF494ZUY 143559 ENCODE Processing Pipeline cf63471f4ff14b7c12af9665ca1e4290 https://www.encodeproject.org/files/ENCFF808IJO/@@download/ENCFF808IJO.bigBed hg19 released low read depth, mild to moderate bottlenecking missing control alignments ENCFF772GVZ bed narrowPeak conservative idr thresholded peaks ENCSR654CQU ChIP-seq EFO:0002067 K562 cell line Homo sapiens SNIP1-human ENCAB027LVC DNA False 2017-06-23 ENCODE 1, 2 ENCFF001TDO, ENCFF039BZL, ENCFF363FXM, ENCFF842STK 28403 ENCODE Processing Pipeline c51ac9c07d89033d1ca39c9cefcb2b5f https://www.encodeproject.org/files/ENCFF772GVZ/@@download/ENCFF772GVZ.bed.gz hg19 released low read depth, mild to moderate bottlenecking missing control alignments ENCFF500HSN bigBed narrowPeak conservative idr thresholded peaks ENCSR654CQU ChIP-seq EFO:0002067 K562 cell line Homo sapiens SNIP1-human ENCAB027LVC DNA False 2017-06-23 ENCODE 1, 2 ENCFF772GVZ 88816 ENCODE Processing Pipeline 745171bbae39e2ea72be57b2bea02bb9 https://www.encodeproject.org/files/ENCFF500HSN/@@download/ENCFF500HSN.bigBed hg19 released low read depth, mild to moderate bottlenecking missing control alignments ENCFF494ZUY bed narrowPeak optimal idr thresholded peaks ENCSR654CQU ChIP-seq EFO:0002067 K562 cell line Homo sapiens SNIP1-human ENCAB027LVC DNA False 2017-06-23 ENCODE 1, 2 ENCFF001TDO, ENCFF039BZL, ENCFF363FXM, ENCFF842STK 52646 ENCODE Processing Pipeline d84d3f827e6208c9292af63c7bd62158 https://www.encodeproject.org/files/ENCFF494ZUY/@@download/ENCFF494ZUY.bed.gz hg19 released low read depth, mild to moderate bottlenecking missing control alignments ENCFF000YTD bam alignments ENCSR000EFV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAX-human ENCAB000AIL DNA see document see document False 2012-05-14 ENCODE 2 1 204042535 Michael Snyder, Stanford ae4df4b2a5057316b474e48dd999ec26 https://www.encodeproject.org/files/ENCFF000YTD/@@download/ENCFF000YTD.bam hg19 archived borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample, missing derived_from insufficient read depth ENCFF000YTE bigBed narrowPeak peaks ENCSR000EFV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAX-human ENCAB000AIL DNA see document see document False 2012-05-14 ENCODE ENCFF001VNS 2088971 Michael Snyder, Stanford b5c72f89bb862bd0e88c05cea44a1793 https://www.encodeproject.org/files/ENCFF000YTE/@@download/ENCFF000YTE.bigBed hg19 archived borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample insufficient read depth ENCFF000YTF fastq reads ENCSR000EFV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAX-human ENCAB000AIL DNA see document see document False 2012-05-14 ENCODE 1 1 36 single-ended 858375495 Michael Snyder, Stanford 3ede5a75cbedede19695b0c5a62ce1d4 https://www.encodeproject.org/files/ENCFF000YTF/@@download/ENCFF000YTF.fastq.gz Illumina Genome Analyzer /files/ENCFF000YRB/ released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample insufficient read depth ENCFF000YTH fastq reads ENCSR000EFV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAX-human ENCAB000AIL DNA see document see document False 2012-05-14 ENCODE 2 1 36 single-ended 331571902 Michael Snyder, Stanford cf9627611fc2da39414117f0ad4b8459 https://www.encodeproject.org/files/ENCFF000YTH/@@download/ENCFF000YTH.fastq.gz Illumina Genome Analyzer /files/ENCFF000YRB/ released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample insufficient read depth ENCFF000YTJ bam alignments ENCSR000EFV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAX-human ENCAB000AIL DNA see document see document False 2012-05-14 ENCODE 1 1 493990154 Michael Snyder, Stanford 1428617ec0bed80e586c1a3eee7899ae https://www.encodeproject.org/files/ENCFF000YTJ/@@download/ENCFF000YTJ.bam hg19 archived borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample, missing derived_from insufficient read depth ENCFF000YTK bigWig signal ENCSR000EFV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAX-human ENCAB000AIL DNA see document see document False 2012-05-14 ENCODE 126739690 Michael Snyder, Stanford 434c8e276e939fdb1935e8237dda7677 https://www.encodeproject.org/files/ENCFF000YTK/@@download/ENCFF000YTK.bigWig hg19 archived borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample, missing derived_from insufficient read depth ENCFF001VNS bed narrowPeak peaks ENCSR000EFV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAX-human ENCAB000AIL DNA see document see document False 2012-05-14 ENCODE 830561 Michael Snyder, Stanford 53d37128b9036301c7fc2b74ee4bf7d2 https://www.encodeproject.org/files/ENCFF001VNS/@@download/ENCFF001VNS.bed.gz hg19 archived borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample, missing derived_from insufficient read depth ENCFF002CXD bed narrowPeak optimal idr thresholded peaks ENCSR000EFV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAX-human ENCAB000AIL DNA see document see document False 2012-05-14 ENCODE 633651 ENCODE Consortium Analysis Working Group 13a3c429f910b853f14a8fa2de029ec9 https://www.encodeproject.org/files/ENCFF002CXD/@@download/ENCFF002CXD.bed.gz hg19 archived borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample, missing derived_from insufficient read depth ENCFF067FGF bigBed narrowPeak optimal idr thresholded peaks ENCSR000EFV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAX-human ENCAB000AIL DNA see document see document False 2012-05-14 ENCODE ENCFF002CXD 1461891 ENCODE Consortium 1a4ba9ac6c2169540d3cfc0906289564 https://www.encodeproject.org/files/ENCFF067FGF/@@download/ENCFF067FGF.bigBed hg19 archived borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample insufficient read depth ENCFF844LIK bam unfiltered alignments ENCSR000EFV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAX-human ENCAB000AIL DNA see document see document False 2012-05-14 ENCODE 2 36 ENCFF000YTH, ENCFF643CGH 383305076 ENCODE Processing Pipeline 15db2ea46be12e9241aa7b7a0bdca2b6 https://www.encodeproject.org/files/ENCFF844LIK/@@download/ENCFF844LIK.bam GRCh38 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample insufficient read depth ENCFF635HIS bam alignments ENCSR000EFV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAX-human ENCAB000AIL DNA see document see document False 2012-05-14 ENCODE 2 36 ENCFF000YTH, ENCFF643CGH 277429956 ENCODE Processing Pipeline af0eecd33dc87a6a4e214b84477d829c https://www.encodeproject.org/files/ENCFF635HIS/@@download/ENCFF635HIS.bam GRCh38 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample insufficient read depth ENCFF083GLO bam unfiltered alignments ENCSR000EFV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAX-human ENCAB000AIL DNA see document see document False 2012-05-14 ENCODE 1 36 ENCFF000YTF, ENCFF643CGH 963544988 ENCODE Processing Pipeline de0687c9073cb39446ce67a2bd5a476e https://www.encodeproject.org/files/ENCFF083GLO/@@download/ENCFF083GLO.bam GRCh38 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample insufficient read depth ENCFF360QBV bam alignments ENCSR000EFV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAX-human ENCAB000AIL DNA see document see document False 2012-05-14 ENCODE 1 36 ENCFF000YTF, ENCFF643CGH 688282268 ENCODE Processing Pipeline 23f5992049bd0ba05f6dab41ab1348f6 https://www.encodeproject.org/files/ENCFF360QBV/@@download/ENCFF360QBV.bam GRCh38 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample insufficient read depth ENCFF610XAJ bam unfiltered alignments ENCSR000EFV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAX-human ENCAB000AIL DNA see document see document False 2012-05-14 ENCODE 1 36 ENCFF000YTF, ENCFF807MUK 960442685 ENCODE Processing Pipeline 9eb1e4d0fafd04a3751b7894c31e2aec https://www.encodeproject.org/files/ENCFF610XAJ/@@download/ENCFF610XAJ.bam hg19 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample insufficient read depth ENCFF543CKI bam alignments ENCSR000EFV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAX-human ENCAB000AIL DNA see document see document False 2012-05-14 ENCODE 2 36 ENCFF000YTH, ENCFF807MUK 277724803 ENCODE Processing Pipeline 801af5973d0d6d3d34a97e45ebe8baff https://www.encodeproject.org/files/ENCFF543CKI/@@download/ENCFF543CKI.bam hg19 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample insufficient read depth ENCFF938QJA bam alignments ENCSR000EFV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAX-human ENCAB000AIL DNA see document see document False 2012-05-14 ENCODE 1 36 ENCFF000YTF, ENCFF807MUK 688899678 ENCODE Processing Pipeline b1893be60d425d5fea9970831aadb8a2 https://www.encodeproject.org/files/ENCFF938QJA/@@download/ENCFF938QJA.bam hg19 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample insufficient read depth ENCFF172YQZ bam unfiltered alignments ENCSR000EFV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAX-human ENCAB000AIL DNA see document see document False 2012-05-14 ENCODE 2 36 ENCFF000YTH, ENCFF807MUK 382167021 ENCODE Processing Pipeline 8179862bddf4848439d48eb70c952d7d https://www.encodeproject.org/files/ENCFF172YQZ/@@download/ENCFF172YQZ.bam hg19 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample insufficient read depth ENCFF126XVR bigWig signal p-value ENCSR000EFV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAX-human ENCAB000AIL DNA see document see document False 2012-05-14 ENCODE 1 ENCFF023NGN, ENCFF360QBV 540246891 ENCODE Processing Pipeline d1a26912f88b7fa9e5213eacf9f73a40 https://www.encodeproject.org/files/ENCFF126XVR/@@download/ENCFF126XVR.bigWig GRCh38 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample insufficient read depth ENCFF552UDY bigWig signal p-value ENCSR000EFV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAX-human ENCAB000AIL DNA see document see document False 2012-05-14 ENCODE 2 ENCFF023NGN, ENCFF635HIS 364270137 ENCODE Processing Pipeline c9473a4942411bfa4e02e18953d71453 https://www.encodeproject.org/files/ENCFF552UDY/@@download/ENCFF552UDY.bigWig GRCh38 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample insufficient read depth ENCFF412VKD bigWig signal p-value ENCSR000EFV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAX-human ENCAB000AIL DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF023NGN, ENCFF360QBV, ENCFF635HIS 520377195 ENCODE Processing Pipeline 2515c2d6d30c9f3f1e5f18d12b6be85a https://www.encodeproject.org/files/ENCFF412VKD/@@download/ENCFF412VKD.bigWig GRCh38 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample insufficient read depth ENCFF290DAI bigWig fold change over control ENCSR000EFV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAX-human ENCAB000AIL DNA see document see document False 2012-05-14 ENCODE 1 ENCFF023NGN, ENCFF360QBV 338675585 ENCODE Processing Pipeline a6890fd1e2df07cbcf3de5a3a80da654 https://www.encodeproject.org/files/ENCFF290DAI/@@download/ENCFF290DAI.bigWig GRCh38 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample insufficient read depth ENCFF114EOW bigWig fold change over control ENCSR000EFV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAX-human ENCAB000AIL DNA see document see document False 2012-05-14 ENCODE 2 ENCFF023NGN, ENCFF635HIS 170269493 ENCODE Processing Pipeline bd01d6b5b86ee59e25b99680309bf291 https://www.encodeproject.org/files/ENCFF114EOW/@@download/ENCFF114EOW.bigWig GRCh38 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample insufficient read depth ENCFF796GHK bigWig fold change over control ENCSR000EFV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAX-human ENCAB000AIL DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF023NGN, ENCFF360QBV, ENCFF635HIS 451440948 ENCODE Processing Pipeline 691e2700022017e6194b54ac6bce666d https://www.encodeproject.org/files/ENCFF796GHK/@@download/ENCFF796GHK.bigWig GRCh38 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample insufficient read depth ENCFF904QUW bed narrowPeak peaks ENCSR000EFV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAX-human ENCAB000AIL DNA see document see document False 2012-05-14 ENCODE 1 ENCFF023NGN, ENCFF360QBV 5509072 ENCODE Processing Pipeline 1db81d98be8d40323ddd69f3664c80f5 https://www.encodeproject.org/files/ENCFF904QUW/@@download/ENCFF904QUW.bed.gz GRCh38 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample insufficient read depth ENCFF825YKX bed narrowPeak peaks ENCSR000EFV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAX-human ENCAB000AIL DNA see document see document False 2012-05-14 ENCODE 2 ENCFF023NGN, ENCFF635HIS 3547264 ENCODE Processing Pipeline 8dc0c4664be0be5875661174d99d52fe https://www.encodeproject.org/files/ENCFF825YKX/@@download/ENCFF825YKX.bed.gz GRCh38 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample insufficient read depth ENCFF795AWI bed narrowPeak peaks ENCSR000EFV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAX-human ENCAB000AIL DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF023NGN, ENCFF360QBV, ENCFF635HIS 5850250 ENCODE Processing Pipeline 7fcce035ef6a6d48628090241f338d01 https://www.encodeproject.org/files/ENCFF795AWI/@@download/ENCFF795AWI.bed.gz GRCh38 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample insufficient read depth ENCFF618QJO bigBed narrowPeak peaks ENCSR000EFV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAX-human ENCAB000AIL DNA see document see document False 2012-05-14 ENCODE 1 ENCFF904QUW 12961858 ENCODE Processing Pipeline 8bbfeb8ae18eaf9ac2009627d83a95e8 https://www.encodeproject.org/files/ENCFF618QJO/@@download/ENCFF618QJO.bigBed GRCh38 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample insufficient read depth ENCFF730OEJ bigBed narrowPeak peaks ENCSR000EFV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAX-human ENCAB000AIL DNA see document see document False 2012-05-14 ENCODE 2 ENCFF825YKX 7665798 ENCODE Processing Pipeline 0d04c087a2bc3afd85c26f89cf6f6d8a https://www.encodeproject.org/files/ENCFF730OEJ/@@download/ENCFF730OEJ.bigBed GRCh38 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample insufficient read depth ENCFF481AOS bed narrowPeak conservative idr thresholded peaks ENCSR000EFV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAX-human ENCAB000AIL DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF419RSJ, ENCFF795AWI, ENCFF825YKX, ENCFF904QUW 491554 ENCODE Processing Pipeline 0f610de1495c38eac42b5bf0496297c6 https://www.encodeproject.org/files/ENCFF481AOS/@@download/ENCFF481AOS.bed.gz GRCh38 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample insufficient read depth ENCFF778PTE bigBed narrowPeak optimal idr thresholded peaks ENCSR000EFV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAX-human ENCAB000AIL DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF618VMC 1226676 ENCODE Processing Pipeline 309c1d3df1d9e6060acbc2094d06c9ee https://www.encodeproject.org/files/ENCFF778PTE/@@download/ENCFF778PTE.bigBed GRCh38 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample insufficient read depth ENCFF498QNB bigBed narrowPeak peaks ENCSR000EFV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAX-human ENCAB000AIL DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF795AWI 13037500 ENCODE Processing Pipeline 238731870d6841039ee32fad5759272f https://www.encodeproject.org/files/ENCFF498QNB/@@download/ENCFF498QNB.bigBed GRCh38 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample insufficient read depth ENCFF618VMC bed narrowPeak optimal idr thresholded peaks ENCSR000EFV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAX-human ENCAB000AIL DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF419RSJ, ENCFF795AWI, ENCFF825YKX, ENCFF904QUW 625612 ENCODE Processing Pipeline f4682a1dc246195895e23f28ea0ee326 https://www.encodeproject.org/files/ENCFF618VMC/@@download/ENCFF618VMC.bed.gz GRCh38 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample insufficient read depth ENCFF466VUY bigBed narrowPeak conservative idr thresholded peaks ENCSR000EFV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAX-human ENCAB000AIL DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF481AOS 1026533 ENCODE Processing Pipeline 809209c3def74116604cc4d29039f447 https://www.encodeproject.org/files/ENCFF466VUY/@@download/ENCFF466VUY.bigBed GRCh38 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample insufficient read depth ENCFF920JDG bigWig signal p-value ENCSR000EFV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAX-human ENCAB000AIL DNA see document see document False 2012-05-14 ENCODE 1 ENCFF710NTS, ENCFF938QJA 469971486 ENCODE Processing Pipeline 360d266d7ba7e97bb62c24cb6690ec87 https://www.encodeproject.org/files/ENCFF920JDG/@@download/ENCFF920JDG.bigWig hg19 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample insufficient read depth ENCFF527QTX bigWig fold change over control ENCSR000EFV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAX-human ENCAB000AIL DNA see document see document False 2012-05-14 ENCODE 1 ENCFF710NTS, ENCFF938QJA 339864757 ENCODE Processing Pipeline b5aa3439267b47586be5df5f1377890f https://www.encodeproject.org/files/ENCFF527QTX/@@download/ENCFF527QTX.bigWig hg19 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample insufficient read depth ENCFF857RWI bigWig signal p-value ENCSR000EFV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAX-human ENCAB000AIL DNA see document see document False 2012-05-14 ENCODE 2 ENCFF543CKI, ENCFF710NTS 407186719 ENCODE Processing Pipeline c805c6de0a1d0eb429620b3a04215ad1 https://www.encodeproject.org/files/ENCFF857RWI/@@download/ENCFF857RWI.bigWig hg19 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample insufficient read depth ENCFF667YTQ bigWig signal p-value ENCSR000EFV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAX-human ENCAB000AIL DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF543CKI, ENCFF710NTS, ENCFF938QJA 520679886 ENCODE Processing Pipeline 214c66f308c1c5c272d1bec07256014b https://www.encodeproject.org/files/ENCFF667YTQ/@@download/ENCFF667YTQ.bigWig hg19 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample insufficient read depth ENCFF934LWU bigWig fold change over control ENCSR000EFV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAX-human ENCAB000AIL DNA see document see document False 2012-05-14 ENCODE 2 ENCFF543CKI, ENCFF710NTS 168953814 ENCODE Processing Pipeline 10d902f52b12dd2038f1e1873c36a30a https://www.encodeproject.org/files/ENCFF934LWU/@@download/ENCFF934LWU.bigWig hg19 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample insufficient read depth ENCFF996GBZ bigWig fold change over control ENCSR000EFV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAX-human ENCAB000AIL DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF543CKI, ENCFF710NTS, ENCFF938QJA 452620152 ENCODE Processing Pipeline a08e7ed92457fd26b9c815575fd1995c https://www.encodeproject.org/files/ENCFF996GBZ/@@download/ENCFF996GBZ.bigWig hg19 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample insufficient read depth ENCFF087MNA bed narrowPeak peaks ENCSR000EFV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAX-human ENCAB000AIL DNA see document see document False 2012-05-14 ENCODE 1 ENCFF710NTS, ENCFF938QJA 5449286 ENCODE Processing Pipeline 4556722732e40deaaae36ab6421f2466 https://www.encodeproject.org/files/ENCFF087MNA/@@download/ENCFF087MNA.bed.gz hg19 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample insufficient read depth ENCFF375JMY bed narrowPeak peaks ENCSR000EFV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAX-human ENCAB000AIL DNA see document see document False 2012-05-14 ENCODE 2 ENCFF543CKI, ENCFF710NTS 3550767 ENCODE Processing Pipeline 35c0d89b30c713f3d58bc4a0379b79fd https://www.encodeproject.org/files/ENCFF375JMY/@@download/ENCFF375JMY.bed.gz hg19 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample insufficient read depth ENCFF417GYT bed narrowPeak peaks ENCSR000EFV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAX-human ENCAB000AIL DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF543CKI, ENCFF710NTS, ENCFF938QJA 5862289 ENCODE Processing Pipeline 3476e1449056b1c577ed1bc48b44da15 https://www.encodeproject.org/files/ENCFF417GYT/@@download/ENCFF417GYT.bed.gz hg19 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample insufficient read depth ENCFF108GKS bigBed narrowPeak peaks ENCSR000EFV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAX-human ENCAB000AIL DNA see document see document False 2012-05-14 ENCODE 1 ENCFF087MNA 12880045 ENCODE Processing Pipeline 1390bc82acde48957a42131de5e8fae5 https://www.encodeproject.org/files/ENCFF108GKS/@@download/ENCFF108GKS.bigBed hg19 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample insufficient read depth ENCFF799RHR bigBed narrowPeak peaks ENCSR000EFV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAX-human ENCAB000AIL DNA see document see document False 2012-05-14 ENCODE 2 ENCFF375JMY 7676801 ENCODE Processing Pipeline 056265f53973e6b0736db9f072928e28 https://www.encodeproject.org/files/ENCFF799RHR/@@download/ENCFF799RHR.bigBed hg19 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample insufficient read depth ENCFF468KKD bigBed narrowPeak peaks ENCSR000EFV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAX-human ENCAB000AIL DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF417GYT 13048355 ENCODE Processing Pipeline 67cfcd15584398e27b6e4360135b8bdd https://www.encodeproject.org/files/ENCFF468KKD/@@download/ENCFF468KKD.bigBed hg19 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample insufficient read depth ENCFF579DYT bigBed narrowPeak conservative idr thresholded peaks ENCSR000EFV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAX-human ENCAB000AIL DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF679HVZ 1027073 ENCODE Processing Pipeline 7351c909117411e902e002a6701f0f58 https://www.encodeproject.org/files/ENCFF579DYT/@@download/ENCFF579DYT.bigBed hg19 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample insufficient read depth ENCFF799HIG bed narrowPeak optimal idr thresholded peaks ENCSR000EFV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAX-human ENCAB000AIL DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF001TDO, ENCFF087MNA, ENCFF375JMY, ENCFF417GYT 624145 ENCODE Processing Pipeline 1b006f9e5ad27a54abb8329a52edd9d8 https://www.encodeproject.org/files/ENCFF799HIG/@@download/ENCFF799HIG.bed.gz hg19 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample insufficient read depth ENCFF679HVZ bed narrowPeak conservative idr thresholded peaks ENCSR000EFV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAX-human ENCAB000AIL DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF001TDO, ENCFF087MNA, ENCFF375JMY, ENCFF417GYT 491844 ENCODE Processing Pipeline a4a652a1b8c7d990f86c11800e00c02f https://www.encodeproject.org/files/ENCFF679HVZ/@@download/ENCFF679HVZ.bed.gz hg19 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample insufficient read depth ENCFF353KFX bigBed narrowPeak optimal idr thresholded peaks ENCSR000EFV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAX-human ENCAB000AIL DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF799HIG 1223454 ENCODE Processing Pipeline 9cefb8185b9e23e6a4111c83b6ca0b91 https://www.encodeproject.org/files/ENCFF353KFX/@@download/ENCFF353KFX.bigBed hg19 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample insufficient read depth ENCFF132GDV fastq reads ENCSR674SCQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF354B-human ENCAB728YTO DNA False 2017-02-13 ENCODE 1 1 100 paired-ended 1 ENCFF407ICD 5144338574 Michael Snyder, Stanford 79a5dda058fff6da46ef829f00b77d4e SRA:SRR6213668 https://www.encodeproject.org/files/ENCFF132GDV/@@download/ENCFF132GDV.fastq.gz Illumina HiSeq 4000 /files/ENCFF337NMZ/, /files/ENCFF437UBY/ released missing genetic modification characterization, mild to moderate bottlenecking ENCFF185PQG fastq reads ENCSR674SCQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF354B-human ENCAB728YTO DNA False 2017-02-13 ENCODE 2 1 100 paired-ended 1 ENCFF835TQN 5244051608 Michael Snyder, Stanford 59adde701bf54c1d0e2a84a5b0763ec5 SRA:SRR6213667 https://www.encodeproject.org/files/ENCFF185PQG/@@download/ENCFF185PQG.fastq.gz Illumina HiSeq 4000 /files/ENCFF337NMZ/, /files/ENCFF437UBY/ released missing genetic modification characterization, mild to moderate bottlenecking ENCFF407ICD fastq reads ENCSR674SCQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF354B-human ENCAB728YTO DNA False 2017-02-13 ENCODE 1 1 100 paired-ended 2 ENCFF132GDV 5667292884 Michael Snyder, Stanford 2d6d1cfc34fa9637fba9b4d87c6b137e SRA:SRR6213668 https://www.encodeproject.org/files/ENCFF407ICD/@@download/ENCFF407ICD.fastq.gz Illumina HiSeq 4000 /files/ENCFF337NMZ/, /files/ENCFF437UBY/ released missing genetic modification characterization, mild to moderate bottlenecking ENCFF835TQN fastq reads ENCSR674SCQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF354B-human ENCAB728YTO DNA False 2017-02-13 ENCODE 2 1 100 paired-ended 2 ENCFF185PQG 5700489110 Michael Snyder, Stanford a1c56376ed9ec814934df5715d3c2413 SRA:SRR6213667 https://www.encodeproject.org/files/ENCFF835TQN/@@download/ENCFF835TQN.fastq.gz Illumina HiSeq 4000 /files/ENCFF337NMZ/, /files/ENCFF437UBY/ released missing genetic modification characterization, mild to moderate bottlenecking ENCFF330IUP bam unfiltered alignments ENCSR674SCQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF354B-human ENCAB728YTO DNA False 2017-02-13 ENCODE 1 100 ENCFF132GDV, ENCFF407ICD, ENCFF807MUK 10429291821 ENCODE Processing Pipeline 3da3816f664ba1e6cbb2cd9c6dd16a63 https://www.encodeproject.org/files/ENCFF330IUP/@@download/ENCFF330IUP.bam hg19 released missing genetic modification characterization, mild to moderate bottlenecking ENCFF730WWH bam unfiltered alignments ENCSR674SCQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF354B-human ENCAB728YTO DNA False 2017-02-13 ENCODE 2 100 ENCFF185PQG, ENCFF643CGH, ENCFF835TQN 10505430388 ENCODE Processing Pipeline 0b6202cc080862dd0420556e35dc5e47 https://www.encodeproject.org/files/ENCFF730WWH/@@download/ENCFF730WWH.bam GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking ENCFF132BTU bam unfiltered alignments ENCSR674SCQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF354B-human ENCAB728YTO DNA False 2017-02-13 ENCODE 2 100 ENCFF185PQG, ENCFF807MUK, ENCFF835TQN 10481196585 ENCODE Processing Pipeline b6090bfa22a9d660a37a8bc447ea5c46 https://www.encodeproject.org/files/ENCFF132BTU/@@download/ENCFF132BTU.bam hg19 released missing genetic modification characterization, mild to moderate bottlenecking ENCFF103HTZ bam alignments ENCSR674SCQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF354B-human ENCAB728YTO DNA False 2017-02-13 ENCODE 2 100 ENCFF185PQG, ENCFF643CGH, ENCFF835TQN 7571766071 ENCODE Processing Pipeline c8968eb921d448f82a37a8231bd04c24 https://www.encodeproject.org/files/ENCFF103HTZ/@@download/ENCFF103HTZ.bam GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking ENCFF693AQW bam unfiltered alignments ENCSR674SCQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF354B-human ENCAB728YTO DNA False 2017-02-13 ENCODE 1 100 ENCFF132GDV, ENCFF407ICD, ENCFF643CGH 10451696377 ENCODE Processing Pipeline 5dc19a4348ef862ea98c4adf71f27ff1 https://www.encodeproject.org/files/ENCFF693AQW/@@download/ENCFF693AQW.bam GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking ENCFF864BUV bam alignments ENCSR674SCQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF354B-human ENCAB728YTO DNA False 2017-02-13 ENCODE 1 100 ENCFF132GDV, ENCFF407ICD, ENCFF643CGH 7520033153 ENCODE Processing Pipeline 2b74191a93e25d1546142efa483a86b7 https://www.encodeproject.org/files/ENCFF864BUV/@@download/ENCFF864BUV.bam GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking ENCFF040FFN bam alignments ENCSR674SCQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF354B-human ENCAB728YTO DNA False 2017-02-13 ENCODE 2 100 ENCFF185PQG, ENCFF807MUK, ENCFF835TQN 7564460055 ENCODE Processing Pipeline 7f482572b7c932eb8ea0aa1a719130d1 https://www.encodeproject.org/files/ENCFF040FFN/@@download/ENCFF040FFN.bam hg19 released missing genetic modification characterization, mild to moderate bottlenecking ENCFF432JII bam alignments ENCSR674SCQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF354B-human ENCAB728YTO DNA False 2017-02-13 ENCODE 1 100 ENCFF132GDV, ENCFF407ICD, ENCFF807MUK 7513364466 ENCODE Processing Pipeline a5e9231f0643b0cd1014ce2adbf3313f https://www.encodeproject.org/files/ENCFF432JII/@@download/ENCFF432JII.bam hg19 released missing genetic modification characterization, mild to moderate bottlenecking ENCFF217VGP bigWig fold change over control ENCSR674SCQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF354B-human ENCAB728YTO DNA False 2017-02-13 ENCODE 1 ENCFF127KUO, ENCFF432JII 1770966479 ENCODE Processing Pipeline a1f5fb67797507e3b6ee3e52bc8e4bb0 https://www.encodeproject.org/files/ENCFF217VGP/@@download/ENCFF217VGP.bigWig hg19 released missing genetic modification characterization, mild to moderate bottlenecking ENCFF250TCH bigBed narrowPeak peaks ENCSR674SCQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF354B-human ENCAB728YTO DNA False 2017-02-13 ENCODE 1 ENCFF849XOM 13283240 ENCODE Processing Pipeline 0bd2ea9cefac03a45b26f9bfd6410fff https://www.encodeproject.org/files/ENCFF250TCH/@@download/ENCFF250TCH.bigBed hg19 released missing genetic modification characterization, mild to moderate bottlenecking ENCFF646YVH bed narrowPeak peaks ENCSR674SCQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF354B-human ENCAB728YTO DNA False 2017-02-13 ENCODE 2 ENCFF103HTZ, ENCFF874TOY 7249249 ENCODE Processing Pipeline 87221ddd88053e98de0b5f627f627d77 https://www.encodeproject.org/files/ENCFF646YVH/@@download/ENCFF646YVH.bed.gz GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking ENCFF744SVC bed narrowPeak optimal idr thresholded peaks ENCSR674SCQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF354B-human ENCAB728YTO DNA False 2017-02-13 ENCODE 1, 2 ENCFF001TDO, ENCFF225EQY, ENCFF228ORA, ENCFF849XOM 92239 ENCODE Processing Pipeline 640dd68dc008f1df30cb7d6f32a82845 https://www.encodeproject.org/files/ENCFF744SVC/@@download/ENCFF744SVC.bed.gz hg19 released missing genetic modification characterization, mild to moderate bottlenecking ENCFF733DGK bigWig signal p-value ENCSR674SCQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF354B-human ENCAB728YTO DNA False 2017-02-13 ENCODE 2 ENCFF040FFN, ENCFF127KUO 1194956180 ENCODE Processing Pipeline 324cb4df9003d186d793f77f8e45a69e https://www.encodeproject.org/files/ENCFF733DGK/@@download/ENCFF733DGK.bigWig hg19 released missing genetic modification characterization, mild to moderate bottlenecking ENCFF504AID bed narrowPeak conservative idr thresholded peaks ENCSR674SCQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF354B-human ENCAB728YTO DNA False 2017-02-13 ENCODE 1, 2 ENCFF001TDO, ENCFF225EQY, ENCFF228ORA, ENCFF849XOM 80776 ENCODE Processing Pipeline 06150697ff256e24616c22ace6080e0d https://www.encodeproject.org/files/ENCFF504AID/@@download/ENCFF504AID.bed.gz hg19 released missing genetic modification characterization, mild to moderate bottlenecking ENCFF374QAY bigBed narrowPeak conservative idr thresholded peaks ENCSR674SCQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF354B-human ENCAB728YTO DNA False 2017-02-13 ENCODE 1, 2 ENCFF504AID 241139 ENCODE Processing Pipeline 84dd8b99520433c86e66bf06c153b705 https://www.encodeproject.org/files/ENCFF374QAY/@@download/ENCFF374QAY.bigBed hg19 released missing genetic modification characterization, mild to moderate bottlenecking ENCFF236LKW bigWig fold change over control ENCSR674SCQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF354B-human ENCAB728YTO DNA False 2017-02-13 ENCODE 2 ENCFF040FFN, ENCFF127KUO 1813811667 ENCODE Processing Pipeline 074227fe587aaf9b9913887d766b0253 https://www.encodeproject.org/files/ENCFF236LKW/@@download/ENCFF236LKW.bigWig hg19 released missing genetic modification characterization, mild to moderate bottlenecking ENCFF487BCH bigBed narrowPeak optimal idr thresholded peaks ENCSR674SCQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF354B-human ENCAB728YTO DNA False 2017-02-13 ENCODE 1, 2 ENCFF744SVC 262081 ENCODE Processing Pipeline a221f10ec5ceff2219b1f9b96970dd5e https://www.encodeproject.org/files/ENCFF487BCH/@@download/ENCFF487BCH.bigBed hg19 released missing genetic modification characterization, mild to moderate bottlenecking ENCFF524JLL bigWig signal p-value ENCSR674SCQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF354B-human ENCAB728YTO DNA False 2017-02-13 ENCODE 1, 2 ENCFF040FFN, ENCFF127KUO, ENCFF432JII 1085482127 ENCODE Processing Pipeline e45d44d56a8ff4b3d64184ac1692d6bf https://www.encodeproject.org/files/ENCFF524JLL/@@download/ENCFF524JLL.bigWig hg19 released missing genetic modification characterization, mild to moderate bottlenecking ENCFF136APZ bigWig fold change over control ENCSR674SCQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF354B-human ENCAB728YTO DNA False 2017-02-13 ENCODE 1, 2 ENCFF040FFN, ENCFF127KUO, ENCFF432JII 2558324250 ENCODE Processing Pipeline d706486789df30970bffba9b85c34da3 https://www.encodeproject.org/files/ENCFF136APZ/@@download/ENCFF136APZ.bigWig hg19 released missing genetic modification characterization, mild to moderate bottlenecking ENCFF849XOM bed narrowPeak peaks ENCSR674SCQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF354B-human ENCAB728YTO DNA False 2017-02-13 ENCODE 1 ENCFF127KUO, ENCFF432JII 7306581 ENCODE Processing Pipeline 569991f0b6311ded2e5751c48f9e24e0 https://www.encodeproject.org/files/ENCFF849XOM/@@download/ENCFF849XOM.bed.gz hg19 released missing genetic modification characterization, mild to moderate bottlenecking ENCFF228ORA bed narrowPeak peaks ENCSR674SCQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF354B-human ENCAB728YTO DNA False 2017-02-13 ENCODE 1, 2 ENCFF040FFN, ENCFF127KUO, ENCFF432JII 7276095 ENCODE Processing Pipeline e9a5cd3ba5431dec031b1956d48404f2 https://www.encodeproject.org/files/ENCFF228ORA/@@download/ENCFF228ORA.bed.gz hg19 released missing genetic modification characterization, mild to moderate bottlenecking ENCFF460YSG bigBed narrowPeak peaks ENCSR674SCQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF354B-human ENCAB728YTO DNA False 2017-02-13 ENCODE 2 ENCFF225EQY 13239662 ENCODE Processing Pipeline 8a1443ad98f6a7220c9370abdb2602cd https://www.encodeproject.org/files/ENCFF460YSG/@@download/ENCFF460YSG.bigBed hg19 released missing genetic modification characterization, mild to moderate bottlenecking ENCFF033GIZ bigWig signal p-value ENCSR674SCQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF354B-human ENCAB728YTO DNA False 2017-02-13 ENCODE 1 ENCFF127KUO, ENCFF432JII 1129424509 ENCODE Processing Pipeline 2df9ad39df612f2f855461624489dc6b https://www.encodeproject.org/files/ENCFF033GIZ/@@download/ENCFF033GIZ.bigWig hg19 released missing genetic modification characterization, mild to moderate bottlenecking ENCFF225EQY bed narrowPeak peaks ENCSR674SCQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF354B-human ENCAB728YTO DNA False 2017-02-13 ENCODE 2 ENCFF040FFN, ENCFF127KUO 7241061 ENCODE Processing Pipeline a13201e6f9f9a88ae3150af208eea6db https://www.encodeproject.org/files/ENCFF225EQY/@@download/ENCFF225EQY.bed.gz hg19 released missing genetic modification characterization, mild to moderate bottlenecking ENCFF317YDI bigBed narrowPeak peaks ENCSR674SCQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF354B-human ENCAB728YTO DNA False 2017-02-13 ENCODE 1, 2 ENCFF228ORA 13112127 ENCODE Processing Pipeline 98bba2ab9abbcd241a1e0e4e64a5b82d https://www.encodeproject.org/files/ENCFF317YDI/@@download/ENCFF317YDI.bigBed hg19 released missing genetic modification characterization, mild to moderate bottlenecking ENCFF154ICY bigWig fold change over control ENCSR674SCQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF354B-human ENCAB728YTO DNA False 2017-02-13 ENCODE 1, 2 ENCFF103HTZ, ENCFF864BUV, ENCFF874TOY 2542964874 ENCODE Processing Pipeline 1606c9114adccd04302ef2c0e283377e https://www.encodeproject.org/files/ENCFF154ICY/@@download/ENCFF154ICY.bigWig GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking ENCFF905NQR bed narrowPeak peaks ENCSR674SCQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF354B-human ENCAB728YTO DNA False 2017-02-13 ENCODE 1 ENCFF864BUV, ENCFF874TOY 7316576 ENCODE Processing Pipeline 0c5980adb2664940d4da4140420602a5 https://www.encodeproject.org/files/ENCFF905NQR/@@download/ENCFF905NQR.bed.gz GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking ENCFF386PEX bed narrowPeak conservative idr thresholded peaks ENCSR674SCQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF354B-human ENCAB728YTO DNA False 2017-02-13 ENCODE 1, 2 ENCFF331MJT, ENCFF419RSJ, ENCFF646YVH, ENCFF905NQR 79330 ENCODE Processing Pipeline e11b911b035ef368ed2d939aa3b6b14d https://www.encodeproject.org/files/ENCFF386PEX/@@download/ENCFF386PEX.bed.gz GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking ENCFF417YVW bigWig signal p-value ENCSR674SCQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF354B-human ENCAB728YTO DNA False 2017-02-13 ENCODE 1 ENCFF864BUV, ENCFF874TOY 1135267365 ENCODE Processing Pipeline 1068d48bb2e4cdb36c2ffc37ab88c600 https://www.encodeproject.org/files/ENCFF417YVW/@@download/ENCFF417YVW.bigWig GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking ENCFF792QUV bigWig signal p-value ENCSR674SCQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF354B-human ENCAB728YTO DNA False 2017-02-13 ENCODE 2 ENCFF103HTZ, ENCFF874TOY 1184700932 ENCODE Processing Pipeline ae94fbe83437b57b4d11689761280a91 https://www.encodeproject.org/files/ENCFF792QUV/@@download/ENCFF792QUV.bigWig GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking ENCFF426YOI bigWig signal p-value ENCSR674SCQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF354B-human ENCAB728YTO DNA False 2017-02-13 ENCODE 1, 2 ENCFF103HTZ, ENCFF864BUV, ENCFF874TOY 1069103784 ENCODE Processing Pipeline 0f52c18c3fdd315037be52555eedfecf https://www.encodeproject.org/files/ENCFF426YOI/@@download/ENCFF426YOI.bigWig GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking ENCFF547RIB bigWig fold change over control ENCSR674SCQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF354B-human ENCAB728YTO DNA False 2017-02-13 ENCODE 1 ENCFF864BUV, ENCFF874TOY 1778027521 ENCODE Processing Pipeline 062f961c58061e23d6cce332de21a1b3 https://www.encodeproject.org/files/ENCFF547RIB/@@download/ENCFF547RIB.bigWig GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking ENCFF768FCF bigWig fold change over control ENCSR674SCQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF354B-human ENCAB728YTO DNA False 2017-02-13 ENCODE 2 ENCFF103HTZ, ENCFF874TOY 1800697212 ENCODE Processing Pipeline 90bd3bdee6138fb5c130a3e20c2d8436 https://www.encodeproject.org/files/ENCFF768FCF/@@download/ENCFF768FCF.bigWig GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking ENCFF537IFJ bigBed narrowPeak peaks ENCSR674SCQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF354B-human ENCAB728YTO DNA False 2017-02-13 ENCODE 1 ENCFF905NQR 13304754 ENCODE Processing Pipeline d1b7f55b7582b10b58c0c3c67e2a7f35 https://www.encodeproject.org/files/ENCFF537IFJ/@@download/ENCFF537IFJ.bigBed GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking ENCFF105BGU bigBed narrowPeak peaks ENCSR674SCQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF354B-human ENCAB728YTO DNA False 2017-02-13 ENCODE 2 ENCFF646YVH 13257262 ENCODE Processing Pipeline cfadd39e52e7559421c302e0d781a01b https://www.encodeproject.org/files/ENCFF105BGU/@@download/ENCFF105BGU.bigBed GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking ENCFF157DJS bigBed narrowPeak peaks ENCSR674SCQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF354B-human ENCAB728YTO DNA False 2017-02-13 ENCODE 1, 2 ENCFF331MJT 13132047 ENCODE Processing Pipeline dd69613973b2395365e09f30c0389517 https://www.encodeproject.org/files/ENCFF157DJS/@@download/ENCFF157DJS.bigBed GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking ENCFF533OBT bed narrowPeak optimal idr thresholded peaks ENCSR674SCQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF354B-human ENCAB728YTO DNA False 2017-02-13 ENCODE 1, 2 ENCFF331MJT, ENCFF419RSJ, ENCFF646YVH, ENCFF905NQR 91678 ENCODE Processing Pipeline 8a565b68c91fb99cf36e3acb754ad3aa https://www.encodeproject.org/files/ENCFF533OBT/@@download/ENCFF533OBT.bed.gz GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking ENCFF009GZQ bigBed narrowPeak optimal idr thresholded peaks ENCSR674SCQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF354B-human ENCAB728YTO DNA False 2017-02-13 ENCODE 1, 2 ENCFF533OBT 264440 ENCODE Processing Pipeline 146b595f5a8d9398137c2deb25cbfc7b https://www.encodeproject.org/files/ENCFF009GZQ/@@download/ENCFF009GZQ.bigBed GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking ENCFF899XBC bigBed narrowPeak conservative idr thresholded peaks ENCSR674SCQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF354B-human ENCAB728YTO DNA False 2017-02-13 ENCODE 1, 2 ENCFF386PEX 242219 ENCODE Processing Pipeline 80a9fb5656f23fba513dbebd21055a00 https://www.encodeproject.org/files/ENCFF899XBC/@@download/ENCFF899XBC.bigBed GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking ENCFF331MJT bed narrowPeak peaks ENCSR674SCQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF354B-human ENCAB728YTO DNA False 2017-02-13 ENCODE 1, 2 ENCFF103HTZ, ENCFF864BUV, ENCFF874TOY 7290175 ENCODE Processing Pipeline 954d46afd3cbc0739764473c2550cb60 https://www.encodeproject.org/files/ENCFF331MJT/@@download/ENCFF331MJT.bed.gz GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking ENCFF270SAL fastq reads ENCSR426URK ChIP-seq EFO:0002067 K562 cell line Homo sapiens AFF1-human ENCAB277XLW DNA False 2018-01-26 ENCODE 1 1 100 paired-ended 1 ENCFF861EEE 2558721446 Michael Snyder, Stanford f09a39e1303dac8b6bb5540938ab0789 https://www.encodeproject.org/files/ENCFF270SAL/@@download/ENCFF270SAL.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFF/ released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF930PKX fastq reads ENCSR426URK ChIP-seq EFO:0002067 K562 cell line Homo sapiens AFF1-human ENCAB277XLW DNA False 2018-01-26 ENCODE 2 1 100 paired-ended 1 ENCFF916BZF 2201821722 Michael Snyder, Stanford 922645a2bb3012f439161918fcc70662 https://www.encodeproject.org/files/ENCFF930PKX/@@download/ENCFF930PKX.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFD/ released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF916BZF fastq reads ENCSR426URK ChIP-seq EFO:0002067 K562 cell line Homo sapiens AFF1-human ENCAB277XLW DNA False 2018-01-26 ENCODE 2 1 100 paired-ended 2 ENCFF930PKX 2227788459 Michael Snyder, Stanford f939059b64c09da3952d208542366caa https://www.encodeproject.org/files/ENCFF916BZF/@@download/ENCFF916BZF.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFA/ released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF861EEE fastq reads ENCSR426URK ChIP-seq EFO:0002067 K562 cell line Homo sapiens AFF1-human ENCAB277XLW DNA False 2018-01-26 ENCODE 1 1 100 paired-ended 2 ENCFF270SAL 2621624422 Michael Snyder, Stanford 1ac3e80747136c68abcec3529b73fbf5 https://www.encodeproject.org/files/ENCFF861EEE/@@download/ENCFF861EEE.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFH/ released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF411CES bam unfiltered alignments ENCSR426URK ChIP-seq EFO:0002067 K562 cell line Homo sapiens AFF1-human ENCAB277XLW DNA False 2018-01-26 ENCODE 2 100 ENCFF807MUK, ENCFF916BZF, ENCFF930PKX 4630453263 ENCODE Processing Pipeline c8291d7a677811c88c558d9f4002ac54 https://www.encodeproject.org/files/ENCFF411CES/@@download/ENCFF411CES.bam hg19 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF326QVR bam unfiltered alignments ENCSR426URK ChIP-seq EFO:0002067 K562 cell line Homo sapiens AFF1-human ENCAB277XLW DNA False 2018-01-26 ENCODE 2 100 ENCFF643CGH, ENCFF916BZF, ENCFF930PKX 4632415199 ENCODE Processing Pipeline a733b37f9bbeb0b0c29c0e4c98d0ba29 https://www.encodeproject.org/files/ENCFF326QVR/@@download/ENCFF326QVR.bam GRCh38 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF391WXJ bam alignments ENCSR426URK ChIP-seq EFO:0002067 K562 cell line Homo sapiens AFF1-human ENCAB277XLW DNA False 2018-01-26 ENCODE 1 100 ENCFF270SAL, ENCFF807MUK, ENCFF861EEE 4064617451 ENCODE Processing Pipeline afff81ef6a6ed9a8fbf0a3e7d2ba7398 https://www.encodeproject.org/files/ENCFF391WXJ/@@download/ENCFF391WXJ.bam hg19 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF754VWZ bam alignments ENCSR426URK ChIP-seq EFO:0002067 K562 cell line Homo sapiens AFF1-human ENCAB277XLW DNA False 2018-01-26 ENCODE 2 100 ENCFF643CGH, ENCFF916BZF, ENCFF930PKX 3488344098 ENCODE Processing Pipeline 3b67a71bda02c1d93a252e4aa8f83b2c https://www.encodeproject.org/files/ENCFF754VWZ/@@download/ENCFF754VWZ.bam GRCh38 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF679BPE bam unfiltered alignments ENCSR426URK ChIP-seq EFO:0002067 K562 cell line Homo sapiens AFF1-human ENCAB277XLW DNA False 2018-01-26 ENCODE 1 100 ENCFF270SAL, ENCFF807MUK, ENCFF861EEE 5386868847 ENCODE Processing Pipeline 69c5a91e147b2328a9cc7a405bce1913 https://www.encodeproject.org/files/ENCFF679BPE/@@download/ENCFF679BPE.bam hg19 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF345IKW bam alignments ENCSR426URK ChIP-seq EFO:0002067 K562 cell line Homo sapiens AFF1-human ENCAB277XLW DNA False 2018-01-26 ENCODE 2 100 ENCFF807MUK, ENCFF916BZF, ENCFF930PKX 3485644084 ENCODE Processing Pipeline ff0776a57afdd555c9ea2f839036b821 https://www.encodeproject.org/files/ENCFF345IKW/@@download/ENCFF345IKW.bam hg19 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF906SMP bam unfiltered alignments ENCSR426URK ChIP-seq EFO:0002067 K562 cell line Homo sapiens AFF1-human ENCAB277XLW DNA False 2018-01-26 ENCODE 1 100 ENCFF270SAL, ENCFF643CGH, ENCFF861EEE 5389434655 ENCODE Processing Pipeline b70a730793999f08d01bef455ec86c2a https://www.encodeproject.org/files/ENCFF906SMP/@@download/ENCFF906SMP.bam GRCh38 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF715GHX bam alignments ENCSR426URK ChIP-seq EFO:0002067 K562 cell line Homo sapiens AFF1-human ENCAB277XLW DNA False 2018-01-26 ENCODE 1 100 ENCFF270SAL, ENCFF643CGH, ENCFF861EEE 4067719360 ENCODE Processing Pipeline 616fffc7f57d0dff8134f147428b41eb https://www.encodeproject.org/files/ENCFF715GHX/@@download/ENCFF715GHX.bam GRCh38 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF896HNZ bigWig fold change over control ENCSR426URK ChIP-seq EFO:0002067 K562 cell line Homo sapiens AFF1-human ENCAB277XLW DNA False 2018-01-26 ENCODE 1 ENCFF715GHX, ENCFF910IKB 1158159262 ENCODE Processing Pipeline 0491910d3a93cda4c7a8bd785c2b2a02 https://www.encodeproject.org/files/ENCFF896HNZ/@@download/ENCFF896HNZ.bigWig GRCh38 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF589TBG bigWig fold change over control ENCSR426URK ChIP-seq EFO:0002067 K562 cell line Homo sapiens AFF1-human ENCAB277XLW DNA False 2018-01-26 ENCODE 2 ENCFF227IZS, ENCFF754VWZ 1041648078 ENCODE Processing Pipeline 44251b0e9300dee4499f87cbfd35fea8 https://www.encodeproject.org/files/ENCFF589TBG/@@download/ENCFF589TBG.bigWig GRCh38 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF447DHW bigWig signal p-value ENCSR426URK ChIP-seq EFO:0002067 K562 cell line Homo sapiens AFF1-human ENCAB277XLW DNA False 2018-01-26 ENCODE 2 ENCFF227IZS, ENCFF754VWZ 952340027 ENCODE Processing Pipeline 2bb077c3b7dd3733aec9ac495b695b56 https://www.encodeproject.org/files/ENCFF447DHW/@@download/ENCFF447DHW.bigWig GRCh38 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF777OFZ bed narrowPeak peaks ENCSR426URK ChIP-seq EFO:0002067 K562 cell line Homo sapiens AFF1-human ENCAB277XLW DNA False 2018-01-26 ENCODE 1 ENCFF715GHX, ENCFF910IKB 6872556 ENCODE Processing Pipeline cfd6438ee555ec73d62479525fe258ca https://www.encodeproject.org/files/ENCFF777OFZ/@@download/ENCFF777OFZ.bed.gz GRCh38 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF937MNZ bigWig signal p-value ENCSR426URK ChIP-seq EFO:0002067 K562 cell line Homo sapiens AFF1-human ENCAB277XLW DNA False 2018-01-26 ENCODE 1 ENCFF715GHX, ENCFF910IKB 1008540831 ENCODE Processing Pipeline 6f0e783f9ce898257358e057cba3506a https://www.encodeproject.org/files/ENCFF937MNZ/@@download/ENCFF937MNZ.bigWig GRCh38 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF813NGW bed narrowPeak peaks ENCSR426URK ChIP-seq EFO:0002067 K562 cell line Homo sapiens AFF1-human ENCAB277XLW DNA False 2018-01-26 ENCODE 1, 2 ENCFF227IZS, ENCFF715GHX, ENCFF754VWZ, ENCFF910IKB 7229209 ENCODE Processing Pipeline 05874a3930e2093a12ffcd28dd630d91 https://www.encodeproject.org/files/ENCFF813NGW/@@download/ENCFF813NGW.bed.gz GRCh38 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF036GKQ bigBed narrowPeak peaks ENCSR426URK ChIP-seq EFO:0002067 K562 cell line Homo sapiens AFF1-human ENCAB277XLW DNA False 2018-01-26 ENCODE 1, 2 ENCFF813NGW 12928175 ENCODE Processing Pipeline 923e15bf31546d96047d4d9975891f18 https://www.encodeproject.org/files/ENCFF036GKQ/@@download/ENCFF036GKQ.bigBed GRCh38 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF009PKA bigBed narrowPeak optimal idr thresholded peaks ENCSR426URK ChIP-seq EFO:0002067 K562 cell line Homo sapiens AFF1-human ENCAB277XLW DNA False 2018-01-26 ENCODE 1, 2 ENCFF489SKQ 739518 ENCODE Processing Pipeline 20de2d32227f6a3902470d2db130b4b6 https://www.encodeproject.org/files/ENCFF009PKA/@@download/ENCFF009PKA.bigBed GRCh38 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF498STE bigWig signal p-value ENCSR426URK ChIP-seq EFO:0002067 K562 cell line Homo sapiens AFF1-human ENCAB277XLW DNA False 2018-01-26 ENCODE 1, 2 ENCFF227IZS, ENCFF715GHX, ENCFF754VWZ, ENCFF910IKB 1843209530 ENCODE Processing Pipeline 2d8942d41c96e9f2c4dbd93ed03bed9e https://www.encodeproject.org/files/ENCFF498STE/@@download/ENCFF498STE.bigWig GRCh38 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF635SVV bed narrowPeak peaks ENCSR426URK ChIP-seq EFO:0002067 K562 cell line Homo sapiens AFF1-human ENCAB277XLW DNA False 2018-01-26 ENCODE 2 ENCFF227IZS, ENCFF754VWZ 6642415 ENCODE Processing Pipeline 68a27e834aea65758445b2d31e56b855 https://www.encodeproject.org/files/ENCFF635SVV/@@download/ENCFF635SVV.bed.gz GRCh38 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF368AZA bigWig fold change over control ENCSR426URK ChIP-seq EFO:0002067 K562 cell line Homo sapiens AFF1-human ENCAB277XLW DNA False 2018-01-26 ENCODE 1, 2 ENCFF227IZS, ENCFF715GHX, ENCFF754VWZ, ENCFF910IKB 2026266548 ENCODE Processing Pipeline 83a079dd61fb01a3f5b227be6bad7afa https://www.encodeproject.org/files/ENCFF368AZA/@@download/ENCFF368AZA.bigWig GRCh38 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF296OTQ bigBed narrowPeak peaks ENCSR426URK ChIP-seq EFO:0002067 K562 cell line Homo sapiens AFF1-human ENCAB277XLW DNA False 2018-01-26 ENCODE 1 ENCFF777OFZ 13145337 ENCODE Processing Pipeline 43d28e827a2a95dc01f68a8aaf8106c3 https://www.encodeproject.org/files/ENCFF296OTQ/@@download/ENCFF296OTQ.bigBed GRCh38 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF646AZP bed narrowPeak conservative idr thresholded peaks ENCSR426URK ChIP-seq EFO:0002067 K562 cell line Homo sapiens AFF1-human ENCAB277XLW DNA False 2018-01-26 ENCODE 1, 2 ENCFF419RSJ, ENCFF635SVV, ENCFF777OFZ, ENCFF813NGW 256530 ENCODE Processing Pipeline 896e24ffc5e7f1fd2758b52bc8c25dee https://www.encodeproject.org/files/ENCFF646AZP/@@download/ENCFF646AZP.bed.gz GRCh38 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF535OZO bigBed narrowPeak conservative idr thresholded peaks ENCSR426URK ChIP-seq EFO:0002067 K562 cell line Homo sapiens AFF1-human ENCAB277XLW DNA False 2018-01-26 ENCODE 1, 2 ENCFF646AZP 572919 ENCODE Processing Pipeline aa8bbaa01aa577c42b0fd1d164e0c337 https://www.encodeproject.org/files/ENCFF535OZO/@@download/ENCFF535OZO.bigBed GRCh38 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF489SKQ bed narrowPeak optimal idr thresholded peaks ENCSR426URK ChIP-seq EFO:0002067 K562 cell line Homo sapiens AFF1-human ENCAB277XLW DNA False 2018-01-26 ENCODE 1, 2 ENCFF419RSJ, ENCFF635SVV, ENCFF777OFZ, ENCFF813NGW 358546 ENCODE Processing Pipeline fddc0e3b44e6576405197755d02fa83a https://www.encodeproject.org/files/ENCFF489SKQ/@@download/ENCFF489SKQ.bed.gz GRCh38 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF438BVV bigBed narrowPeak peaks ENCSR426URK ChIP-seq EFO:0002067 K562 cell line Homo sapiens AFF1-human ENCAB277XLW DNA False 2018-01-26 ENCODE 2 ENCFF635SVV 13152197 ENCODE Processing Pipeline 2ee84def99d99e5bbdb0f40d592504f7 https://www.encodeproject.org/files/ENCFF438BVV/@@download/ENCFF438BVV.bigBed GRCh38 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF076WXV bigWig signal p-value ENCSR426URK ChIP-seq EFO:0002067 K562 cell line Homo sapiens AFF1-human ENCAB277XLW DNA False 2018-01-26 ENCODE 1, 2 ENCFF051LWI, ENCFF345IKW, ENCFF391WXJ, ENCFF581ZJL 1829874086 ENCODE Processing Pipeline 3b1355fad7fc3774c2337a9cf09a2cfb https://www.encodeproject.org/files/ENCFF076WXV/@@download/ENCFF076WXV.bigWig hg19 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF653QLK bed narrowPeak peaks ENCSR426URK ChIP-seq EFO:0002067 K562 cell line Homo sapiens AFF1-human ENCAB277XLW DNA False 2018-01-26 ENCODE 1, 2 ENCFF051LWI, ENCFF345IKW, ENCFF391WXJ, ENCFF581ZJL 7224054 ENCODE Processing Pipeline 15ad048ac2ac50648143c494a23ae8eb https://www.encodeproject.org/files/ENCFF653QLK/@@download/ENCFF653QLK.bed.gz hg19 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF547VER bigBed narrowPeak peaks ENCSR426URK ChIP-seq EFO:0002067 K562 cell line Homo sapiens AFF1-human ENCAB277XLW DNA False 2018-01-26 ENCODE 1, 2 ENCFF653QLK 12913909 ENCODE Processing Pipeline 2cf3a21bfc898451e16c539222d54009 https://www.encodeproject.org/files/ENCFF547VER/@@download/ENCFF547VER.bigBed hg19 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF176SLT bigWig signal p-value ENCSR426URK ChIP-seq EFO:0002067 K562 cell line Homo sapiens AFF1-human ENCAB277XLW DNA False 2018-01-26 ENCODE 1 ENCFF391WXJ, ENCFF581ZJL 983681933 ENCODE Processing Pipeline 48a87035b57e1f9812d0268e8b25eec5 https://www.encodeproject.org/files/ENCFF176SLT/@@download/ENCFF176SLT.bigWig hg19 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF689PVL bigWig fold change over control ENCSR426URK ChIP-seq EFO:0002067 K562 cell line Homo sapiens AFF1-human ENCAB277XLW DNA False 2018-01-26 ENCODE 1 ENCFF391WXJ, ENCFF581ZJL 1156779600 ENCODE Processing Pipeline b0ffe0b2e8603a6eb4007904016e8ac8 https://www.encodeproject.org/files/ENCFF689PVL/@@download/ENCFF689PVL.bigWig hg19 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF306ZWZ bed narrowPeak peaks ENCSR426URK ChIP-seq EFO:0002067 K562 cell line Homo sapiens AFF1-human ENCAB277XLW DNA False 2018-01-26 ENCODE 1 ENCFF391WXJ, ENCFF581ZJL 6898277 ENCODE Processing Pipeline a7291abb982198f7a84b1f6a90cf8769 https://www.encodeproject.org/files/ENCFF306ZWZ/@@download/ENCFF306ZWZ.bed.gz hg19 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF282AQD bigWig fold change over control ENCSR426URK ChIP-seq EFO:0002067 K562 cell line Homo sapiens AFF1-human ENCAB277XLW DNA False 2018-01-26 ENCODE 2 ENCFF051LWI, ENCFF345IKW 1041056879 ENCODE Processing Pipeline 3e3addc9ccea79abaca443a3bff110e7 https://www.encodeproject.org/files/ENCFF282AQD/@@download/ENCFF282AQD.bigWig hg19 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF466GTG bed narrowPeak conservative idr thresholded peaks ENCSR426URK ChIP-seq EFO:0002067 K562 cell line Homo sapiens AFF1-human ENCAB277XLW DNA False 2018-01-26 ENCODE 1, 2 ENCFF001TDO, ENCFF306ZWZ, ENCFF413ETF, ENCFF653QLK 256550 ENCODE Processing Pipeline e51628e78bf2f400e6b4a24cd9ee0f61 https://www.encodeproject.org/files/ENCFF466GTG/@@download/ENCFF466GTG.bed.gz hg19 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF214FDS bigWig signal p-value ENCSR426URK ChIP-seq EFO:0002067 K562 cell line Homo sapiens AFF1-human ENCAB277XLW DNA False 2018-01-26 ENCODE 2 ENCFF051LWI, ENCFF345IKW 936120658 ENCODE Processing Pipeline 6cb294ba0cd9b08fb6c1e689330059ed https://www.encodeproject.org/files/ENCFF214FDS/@@download/ENCFF214FDS.bigWig hg19 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF813XDC bigWig fold change over control ENCSR426URK ChIP-seq EFO:0002067 K562 cell line Homo sapiens AFF1-human ENCAB277XLW DNA False 2018-01-26 ENCODE 1, 2 ENCFF051LWI, ENCFF345IKW, ENCFF391WXJ, ENCFF581ZJL 2052511385 ENCODE Processing Pipeline 13cd0f184f3b4e6ba5849c5d39c5c62a https://www.encodeproject.org/files/ENCFF813XDC/@@download/ENCFF813XDC.bigWig hg19 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF413ETF bed narrowPeak peaks ENCSR426URK ChIP-seq EFO:0002067 K562 cell line Homo sapiens AFF1-human ENCAB277XLW DNA False 2018-01-26 ENCODE 2 ENCFF051LWI, ENCFF345IKW 6641125 ENCODE Processing Pipeline 19cc28863f7fd760e831d9789aaec04c https://www.encodeproject.org/files/ENCFF413ETF/@@download/ENCFF413ETF.bed.gz hg19 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF317YAR bigBed narrowPeak peaks ENCSR426URK ChIP-seq EFO:0002067 K562 cell line Homo sapiens AFF1-human ENCAB277XLW DNA False 2018-01-26 ENCODE 2 ENCFF413ETF 13139541 ENCODE Processing Pipeline 35074f714862f1a8c734f31fb1b7bc3f https://www.encodeproject.org/files/ENCFF317YAR/@@download/ENCFF317YAR.bigBed hg19 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF360BTO bed narrowPeak optimal idr thresholded peaks ENCSR426URK ChIP-seq EFO:0002067 K562 cell line Homo sapiens AFF1-human ENCAB277XLW DNA False 2018-01-26 ENCODE 1, 2 ENCFF001TDO, ENCFF306ZWZ, ENCFF413ETF, ENCFF653QLK 370611 ENCODE Processing Pipeline d924365e4efb8282031777e9dde5f954 https://www.encodeproject.org/files/ENCFF360BTO/@@download/ENCFF360BTO.bed.gz hg19 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF952EXS bigBed narrowPeak peaks ENCSR426URK ChIP-seq EFO:0002067 K562 cell line Homo sapiens AFF1-human ENCAB277XLW DNA False 2018-01-26 ENCODE 1 ENCFF306ZWZ 13155194 ENCODE Processing Pipeline 1b6ff89486e6d771670edd0f1679fb6d https://www.encodeproject.org/files/ENCFF952EXS/@@download/ENCFF952EXS.bigBed hg19 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF738MJR bigBed narrowPeak optimal idr thresholded peaks ENCSR426URK ChIP-seq EFO:0002067 K562 cell line Homo sapiens AFF1-human ENCAB277XLW DNA False 2018-01-26 ENCODE 1, 2 ENCFF360BTO 754394 ENCODE Processing Pipeline 3dcdee71ec63fc0258603e9f66493767 https://www.encodeproject.org/files/ENCFF738MJR/@@download/ENCFF738MJR.bigBed hg19 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF748JSB bigBed narrowPeak conservative idr thresholded peaks ENCSR426URK ChIP-seq EFO:0002067 K562 cell line Homo sapiens AFF1-human ENCAB277XLW DNA False 2018-01-26 ENCODE 1, 2 ENCFF466GTG 571904 ENCODE Processing Pipeline e2a4e187887c01412417b44b0264e8cf https://www.encodeproject.org/files/ENCFF748JSB/@@download/ENCFF748JSB.bigBed hg19 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF000YET bigBed narrowPeak peaks ENCSR000EFY ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARID3A-human ENCAB000ASQ DNA see document see document False 2012-05-14 ENCODE ENCFF001VLW 2247519 Michael Snyder, Stanford 34a6744079ed9151c96120fee4b6e000 https://www.encodeproject.org/files/ENCFF000YET/@@download/ENCFF000YET.bigBed hg19 archived borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample insufficient read depth ENCFF000YEU fastq reads ENCSR000EFY ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARID3A-human ENCAB000ASQ DNA see document see document False 2012-05-14 ENCODE 1 1 36 single-ended 994388532 Michael Snyder, Stanford 46eaac5b19fe4e74d5187bc120bf1e53 https://www.encodeproject.org/files/ENCFF000YEU/@@download/ENCFF000YEU.fastq.gz Illumina Genome Analyzer /files/ENCFF000YRB/ released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample insufficient read depth ENCFF000YEW fastq reads ENCSR000EFY ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARID3A-human ENCAB000ASQ DNA see document see document False 2012-05-14 ENCODE 2 1 36 single-ended 514427388 Michael Snyder, Stanford d7ea18188f6f0c3706b343b7d6afba8c https://www.encodeproject.org/files/ENCFF000YEW/@@download/ENCFF000YEW.fastq.gz Illumina Genome Analyzer /files/ENCFF000YRB/ released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample insufficient read depth ENCFF000YEY bam alignments ENCSR000EFY ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARID3A-human ENCAB000ASQ DNA see document see document False 2012-05-14 ENCODE 2 1 291617349 Michael Snyder, Stanford 8f4207cd3ef777b56e2320eb84f319fe https://www.encodeproject.org/files/ENCFF000YEY/@@download/ENCFF000YEY.bam hg19 archived borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample, missing derived_from insufficient read depth ENCFF000YEZ bigWig signal ENCSR000EFY ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARID3A-human ENCAB000ASQ DNA see document see document False 2012-05-14 ENCODE 333432144 Michael Snyder, Stanford 4dca09c6e79410bec758fa62e6c3e184 https://www.encodeproject.org/files/ENCFF000YEZ/@@download/ENCFF000YEZ.bigWig hg19 archived borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample, missing derived_from insufficient read depth ENCFF000YFA bam alignments ENCSR000EFY ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARID3A-human ENCAB000ASQ DNA see document see document False 2012-05-14 ENCODE 1 1 574689898 Michael Snyder, Stanford aa43f59c59dd0b2fd5bfdc9d473c7de3 https://www.encodeproject.org/files/ENCFF000YFA/@@download/ENCFF000YFA.bam hg19 archived borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample, missing derived_from insufficient read depth ENCFF001VLW bed narrowPeak peaks ENCSR000EFY ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARID3A-human ENCAB000ASQ DNA see document see document False 2012-05-14 ENCODE 849854 Michael Snyder, Stanford cb26007d18a7cf24a0b680ad24cb1d4a https://www.encodeproject.org/files/ENCFF001VLW/@@download/ENCFF001VLW.bed.gz hg19 archived borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample, missing derived_from insufficient read depth ENCFF002CVL bed narrowPeak optimal idr thresholded peaks ENCSR000EFY ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARID3A-human ENCAB000ASQ DNA see document see document False 2012-05-14 ENCODE 209743 ENCODE Consortium Analysis Working Group 506383a9730f9b5869c629ba78084b51 https://www.encodeproject.org/files/ENCFF002CVL/@@download/ENCFF002CVL.bed.gz hg19 archived borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample, missing derived_from insufficient read depth ENCFF276NII bigBed narrowPeak optimal idr thresholded peaks ENCSR000EFY ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARID3A-human ENCAB000ASQ DNA see document see document False 2012-05-14 ENCODE ENCFF002CVL 460785 ENCODE Consortium 2cef5728b6a3e0e07561455370ae3b34 https://www.encodeproject.org/files/ENCFF276NII/@@download/ENCFF276NII.bigBed hg19 archived borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample insufficient read depth ENCFF477DKP bam alignments ENCSR000EFY ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARID3A-human ENCAB000ASQ DNA see document see document False 2012-05-14 ENCODE 2 36 ENCFF000YEW, ENCFF643CGH 388635127 ENCODE Processing Pipeline ac9518f66409973a1b72a0de1a98acfa https://www.encodeproject.org/files/ENCFF477DKP/@@download/ENCFF477DKP.bam GRCh38 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample insufficient read depth ENCFF416CQL bam unfiltered alignments ENCSR000EFY ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARID3A-human ENCAB000ASQ DNA see document see document False 2012-05-14 ENCODE 2 36 ENCFF000YEW, ENCFF643CGH 588227578 ENCODE Processing Pipeline 61a32e53820a9fea82d94fca2bd0bed0 https://www.encodeproject.org/files/ENCFF416CQL/@@download/ENCFF416CQL.bam GRCh38 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample insufficient read depth ENCFF892CZA bam unfiltered alignments ENCSR000EFY ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARID3A-human ENCAB000ASQ DNA see document see document False 2012-05-14 ENCODE 1 36 ENCFF000YEU, ENCFF643CGH 1141025074 ENCODE Processing Pipeline dc9a5c37dcc61974bfea48fed6c0926e https://www.encodeproject.org/files/ENCFF892CZA/@@download/ENCFF892CZA.bam GRCh38 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample insufficient read depth ENCFF495MEU bam alignments ENCSR000EFY ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARID3A-human ENCAB000ASQ DNA see document see document False 2012-05-14 ENCODE 1 36 ENCFF000YEU, ENCFF643CGH 788890710 ENCODE Processing Pipeline 8615bb7baa4c26f56afe1e7650ece588 https://www.encodeproject.org/files/ENCFF495MEU/@@download/ENCFF495MEU.bam GRCh38 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample insufficient read depth ENCFF102ROD bam alignments ENCSR000EFY ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARID3A-human ENCAB000ASQ DNA see document see document False 2012-05-14 ENCODE 2 36 ENCFF000YEW, ENCFF807MUK 388976164 ENCODE Processing Pipeline 0049531f2ea1d75cab8036b8e3e47ea6 https://www.encodeproject.org/files/ENCFF102ROD/@@download/ENCFF102ROD.bam hg19 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample insufficient read depth ENCFF445GEM bam unfiltered alignments ENCSR000EFY ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARID3A-human ENCAB000ASQ DNA see document see document False 2012-05-14 ENCODE 2 36 ENCFF000YEW, ENCFF807MUK 586128476 ENCODE Processing Pipeline 1fbafd13e2c722a1b0e4475f089ba97c https://www.encodeproject.org/files/ENCFF445GEM/@@download/ENCFF445GEM.bam hg19 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample insufficient read depth ENCFF992ORW bam alignments ENCSR000EFY ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARID3A-human ENCAB000ASQ DNA see document see document False 2012-05-14 ENCODE 1 36 ENCFF000YEU, ENCFF807MUK 789468149 ENCODE Processing Pipeline 7c69ea5f4bd02208a85eb420054f93a4 https://www.encodeproject.org/files/ENCFF992ORW/@@download/ENCFF992ORW.bam hg19 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample insufficient read depth ENCFF662SSM bam unfiltered alignments ENCSR000EFY ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARID3A-human ENCAB000ASQ DNA see document see document False 2012-05-14 ENCODE 1 36 ENCFF000YEU, ENCFF807MUK 1136601662 ENCODE Processing Pipeline d2f39c322b1276d88b5f5200ef204164 https://www.encodeproject.org/files/ENCFF662SSM/@@download/ENCFF662SSM.bam hg19 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample insufficient read depth ENCFF308EHN bigWig signal p-value ENCSR000EFY ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARID3A-human ENCAB000ASQ DNA see document see document False 2012-05-14 ENCODE 1 ENCFF023NGN, ENCFF495MEU 458625873 ENCODE Processing Pipeline 21cd6766d37a87c023452d634965bcbc https://www.encodeproject.org/files/ENCFF308EHN/@@download/ENCFF308EHN.bigWig GRCh38 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample insufficient read depth ENCFF783BTQ bigWig signal p-value ENCSR000EFY ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARID3A-human ENCAB000ASQ DNA see document see document False 2012-05-14 ENCODE 2 ENCFF023NGN, ENCFF477DKP 339538064 ENCODE Processing Pipeline 877bf8bf128b8a771bdb2a7e68ce9adc https://www.encodeproject.org/files/ENCFF783BTQ/@@download/ENCFF783BTQ.bigWig GRCh38 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample insufficient read depth ENCFF243FEK bigWig signal p-value ENCSR000EFY ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARID3A-human ENCAB000ASQ DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF023NGN, ENCFF477DKP, ENCFF495MEU 542135448 ENCODE Processing Pipeline 56896162d75327a1f3c4846824fe9671 https://www.encodeproject.org/files/ENCFF243FEK/@@download/ENCFF243FEK.bigWig GRCh38 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample insufficient read depth ENCFF492UNF bigWig fold change over control ENCSR000EFY ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARID3A-human ENCAB000ASQ DNA see document see document False 2012-05-14 ENCODE 2 ENCFF023NGN, ENCFF477DKP 237296359 ENCODE Processing Pipeline fb77bd7e05a2dffa64ffff42ed79c1c4 https://www.encodeproject.org/files/ENCFF492UNF/@@download/ENCFF492UNF.bigWig GRCh38 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample insufficient read depth ENCFF741NSD bigWig fold change over control ENCSR000EFY ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARID3A-human ENCAB000ASQ DNA see document see document False 2012-05-14 ENCODE 1 ENCFF023NGN, ENCFF495MEU 412164932 ENCODE Processing Pipeline 1075f04680626c8870edf4c8d9694a4e https://www.encodeproject.org/files/ENCFF741NSD/@@download/ENCFF741NSD.bigWig GRCh38 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample insufficient read depth ENCFF424NIV bigWig fold change over control ENCSR000EFY ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARID3A-human ENCAB000ASQ DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF023NGN, ENCFF477DKP, ENCFF495MEU 548450644 ENCODE Processing Pipeline 7c0cc25e864f5c2f3f7dab12079c79e3 https://www.encodeproject.org/files/ENCFF424NIV/@@download/ENCFF424NIV.bigWig GRCh38 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample insufficient read depth ENCFF478PFP bed narrowPeak peaks ENCSR000EFY ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARID3A-human ENCAB000ASQ DNA see document see document False 2012-05-14 ENCODE 1 ENCFF023NGN, ENCFF495MEU 5188721 ENCODE Processing Pipeline c63f7f67ba202142b0eca0d01b5a1b2c https://www.encodeproject.org/files/ENCFF478PFP/@@download/ENCFF478PFP.bed.gz GRCh38 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample insufficient read depth ENCFF952GND bed narrowPeak peaks ENCSR000EFY ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARID3A-human ENCAB000ASQ DNA see document see document False 2012-05-14 ENCODE 2 ENCFF023NGN, ENCFF477DKP 4436184 ENCODE Processing Pipeline bd6e0623aead2f87c84242c26f8d1639 https://www.encodeproject.org/files/ENCFF952GND/@@download/ENCFF952GND.bed.gz GRCh38 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample insufficient read depth ENCFF954ZUM bed narrowPeak peaks ENCSR000EFY ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARID3A-human ENCAB000ASQ DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF023NGN, ENCFF477DKP, ENCFF495MEU 5711942 ENCODE Processing Pipeline 96d3da87dc7d1915ec0f0a2e1656b9d1 https://www.encodeproject.org/files/ENCFF954ZUM/@@download/ENCFF954ZUM.bed.gz GRCh38 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample insufficient read depth ENCFF866ZQH bigBed narrowPeak peaks ENCSR000EFY ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARID3A-human ENCAB000ASQ DNA see document see document False 2012-05-14 ENCODE 1 ENCFF478PFP 10956097 ENCODE Processing Pipeline bacc080d1b35e7b5a104a8bb734f41dd https://www.encodeproject.org/files/ENCFF866ZQH/@@download/ENCFF866ZQH.bigBed GRCh38 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample insufficient read depth ENCFF392UFW bigBed narrowPeak peaks ENCSR000EFY ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARID3A-human ENCAB000ASQ DNA see document see document False 2012-05-14 ENCODE 2 ENCFF952GND 10504149 ENCODE Processing Pipeline 01c4197b99026a33f30245f2161f5073 https://www.encodeproject.org/files/ENCFF392UFW/@@download/ENCFF392UFW.bigBed GRCh38 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample insufficient read depth ENCFF272CWK bed narrowPeak conservative idr thresholded peaks ENCSR000EFY ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARID3A-human ENCAB000ASQ DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF419RSJ, ENCFF478PFP, ENCFF952GND, ENCFF954ZUM 187740 ENCODE Processing Pipeline a277c342ec70c32bc1c8e1a6a8e4fe18 https://www.encodeproject.org/files/ENCFF272CWK/@@download/ENCFF272CWK.bed.gz GRCh38 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample insufficient read depth ENCFF757OML bed narrowPeak optimal idr thresholded peaks ENCSR000EFY ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARID3A-human ENCAB000ASQ DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF419RSJ, ENCFF478PFP, ENCFF952GND, ENCFF954ZUM 202727 ENCODE Processing Pipeline 1470b97c347d6d31e38f0fb7655aa78f https://www.encodeproject.org/files/ENCFF757OML/@@download/ENCFF757OML.bed.gz GRCh38 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample insufficient read depth ENCFF853UAI bigBed narrowPeak peaks ENCSR000EFY ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARID3A-human ENCAB000ASQ DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF954ZUM 13277245 ENCODE Processing Pipeline 084654a0c84580f99bfbc917a98ea6bc https://www.encodeproject.org/files/ENCFF853UAI/@@download/ENCFF853UAI.bigBed GRCh38 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample insufficient read depth ENCFF672UGP bigBed narrowPeak conservative idr thresholded peaks ENCSR000EFY ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARID3A-human ENCAB000ASQ DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF272CWK 373568 ENCODE Processing Pipeline db513a4bc83be8051f18d8015c57cae0 https://www.encodeproject.org/files/ENCFF672UGP/@@download/ENCFF672UGP.bigBed GRCh38 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample insufficient read depth ENCFF958PFY bigBed narrowPeak optimal idr thresholded peaks ENCSR000EFY ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARID3A-human ENCAB000ASQ DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF757OML 395063 ENCODE Processing Pipeline 05900771244f09e238c904c1f3352035 https://www.encodeproject.org/files/ENCFF958PFY/@@download/ENCFF958PFY.bigBed GRCh38 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample insufficient read depth ENCFF378JGJ bed narrowPeak peaks ENCSR000EFY ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARID3A-human ENCAB000ASQ DNA see document see document False 2012-05-14 ENCODE 1 ENCFF710NTS, ENCFF992ORW 5188832 ENCODE Processing Pipeline 98ce87791b953d6bb2d7f3af8c7c40b1 https://www.encodeproject.org/files/ENCFF378JGJ/@@download/ENCFF378JGJ.bed.gz hg19 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample insufficient read depth ENCFF732QKX bed narrowPeak peaks ENCSR000EFY ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARID3A-human ENCAB000ASQ DNA see document see document False 2012-05-14 ENCODE 2 ENCFF102ROD, ENCFF710NTS 4458460 ENCODE Processing Pipeline 7ecea1a5ecb46e2e36d17349a13d2f11 https://www.encodeproject.org/files/ENCFF732QKX/@@download/ENCFF732QKX.bed.gz hg19 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample insufficient read depth ENCFF783AFF bigWig fold change over control ENCSR000EFY ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARID3A-human ENCAB000ASQ DNA see document see document False 2012-05-14 ENCODE 1 ENCFF710NTS, ENCFF992ORW 409980494 ENCODE Processing Pipeline bc413df52ba90a4d6519f261633c1334 https://www.encodeproject.org/files/ENCFF783AFF/@@download/ENCFF783AFF.bigWig hg19 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample insufficient read depth ENCFF506CVP bigWig signal p-value ENCSR000EFY ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARID3A-human ENCAB000ASQ DNA see document see document False 2012-05-14 ENCODE 1 ENCFF710NTS, ENCFF992ORW 431244190 ENCODE Processing Pipeline 2dbca5e5d96284cb41947400f7f6590c https://www.encodeproject.org/files/ENCFF506CVP/@@download/ENCFF506CVP.bigWig hg19 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample insufficient read depth ENCFF498PBX bigWig signal p-value ENCSR000EFY ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARID3A-human ENCAB000ASQ DNA see document see document False 2012-05-14 ENCODE 2 ENCFF102ROD, ENCFF710NTS 386742957 ENCODE Processing Pipeline f6b8eef85c69a3e0a6a9aa35b1eec70b https://www.encodeproject.org/files/ENCFF498PBX/@@download/ENCFF498PBX.bigWig hg19 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample insufficient read depth ENCFF326BGM bigWig signal p-value ENCSR000EFY ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARID3A-human ENCAB000ASQ DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF102ROD, ENCFF710NTS, ENCFF992ORW 573580145 ENCODE Processing Pipeline 78aee59b60d5c744eec429850f743eaf https://www.encodeproject.org/files/ENCFF326BGM/@@download/ENCFF326BGM.bigWig hg19 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample insufficient read depth ENCFF107YJY bigWig fold change over control ENCSR000EFY ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARID3A-human ENCAB000ASQ DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF102ROD, ENCFF710NTS, ENCFF992ORW 566392064 ENCODE Processing Pipeline da4cbf876dca71232ba6eff6831f436b https://www.encodeproject.org/files/ENCFF107YJY/@@download/ENCFF107YJY.bigWig hg19 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample insufficient read depth ENCFF442TTJ bigWig fold change over control ENCSR000EFY ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARID3A-human ENCAB000ASQ DNA see document see document False 2012-05-14 ENCODE 2 ENCFF102ROD, ENCFF710NTS 237428518 ENCODE Processing Pipeline be9e1a4fbc37c0047662189d77534f31 https://www.encodeproject.org/files/ENCFF442TTJ/@@download/ENCFF442TTJ.bigWig hg19 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample insufficient read depth ENCFF411VNI bed narrowPeak peaks ENCSR000EFY ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARID3A-human ENCAB000ASQ DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF102ROD, ENCFF710NTS, ENCFF992ORW 5709734 ENCODE Processing Pipeline 9e5231e5c5f8289161374e1eeac19545 https://www.encodeproject.org/files/ENCFF411VNI/@@download/ENCFF411VNI.bed.gz hg19 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample insufficient read depth ENCFF974QZG bed narrowPeak conservative idr thresholded peaks ENCSR000EFY ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARID3A-human ENCAB000ASQ DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF001TDO, ENCFF378JGJ, ENCFF411VNI, ENCFF732QKX 184723 ENCODE Processing Pipeline 0945a2e7e430e667fd9ec3807819b393 https://www.encodeproject.org/files/ENCFF974QZG/@@download/ENCFF974QZG.bed.gz hg19 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample insufficient read depth ENCFF186VKS bigBed narrowPeak optimal idr thresholded peaks ENCSR000EFY ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARID3A-human ENCAB000ASQ DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF835KAT 395486 ENCODE Processing Pipeline f354eb8bde263bce61bc60775400e7b1 https://www.encodeproject.org/files/ENCFF186VKS/@@download/ENCFF186VKS.bigBed hg19 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample insufficient read depth ENCFF910EUX bigBed narrowPeak peaks ENCSR000EFY ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARID3A-human ENCAB000ASQ DNA see document see document False 2012-05-14 ENCODE 1 ENCFF378JGJ 10951793 ENCODE Processing Pipeline eb56c140910d8334c81311e71da5d867 https://www.encodeproject.org/files/ENCFF910EUX/@@download/ENCFF910EUX.bigBed hg19 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample insufficient read depth ENCFF678ZUX bigBed narrowPeak peaks ENCSR000EFY ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARID3A-human ENCAB000ASQ DNA see document see document False 2012-05-14 ENCODE 2 ENCFF732QKX 10504070 ENCODE Processing Pipeline 36be9e9b33d49850c782e2b6cadf5c29 https://www.encodeproject.org/files/ENCFF678ZUX/@@download/ENCFF678ZUX.bigBed hg19 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample insufficient read depth ENCFF342NKD bigBed narrowPeak conservative idr thresholded peaks ENCSR000EFY ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARID3A-human ENCAB000ASQ DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF974QZG 367963 ENCODE Processing Pipeline 0cf6bc51bda77c95d74b92ae405f3529 https://www.encodeproject.org/files/ENCFF342NKD/@@download/ENCFF342NKD.bigBed hg19 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample insufficient read depth ENCFF835KAT bed narrowPeak optimal idr thresholded peaks ENCSR000EFY ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARID3A-human ENCAB000ASQ DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF001TDO, ENCFF378JGJ, ENCFF411VNI, ENCFF732QKX 203969 ENCODE Processing Pipeline 61a07b9ac21ac0103491a01c337814c1 https://www.encodeproject.org/files/ENCFF835KAT/@@download/ENCFF835KAT.bed.gz hg19 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample insufficient read depth ENCFF518OFI bigBed narrowPeak peaks ENCSR000EFY ChIP-seq EFO:0002067 K562 cell line Homo sapiens ARID3A-human ENCAB000ASQ DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF411VNI 13269881 ENCODE Processing Pipeline b1b59ce94472cc410c21c5082a2d98b7 https://www.encodeproject.org/files/ENCFF518OFI/@@download/ENCFF518OFI.bigBed hg19 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample insufficient read depth ENCFF107PYI bam unfiltered alignments ENCSR709DRM ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-E2F5-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 50 ENCFF395ENN, ENCFF633GWT, ENCFF807MUK 1469314995 ENCODE Processing Pipeline 23e7295d164f51bf07558e555db5f886 https://www.encodeproject.org/files/ENCFF107PYI/@@download/ENCFF107PYI.bam hg19 released missing genetic modification characterization ENCFF500YIU bam unfiltered alignments ENCSR709DRM ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-E2F5-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 50 ENCFF384QMY, ENCFF807MUK, ENCFF903EIQ 1190017128 ENCODE Processing Pipeline 74677ccc1d4ea98b5cefcd0b1514aa5d https://www.encodeproject.org/files/ENCFF500YIU/@@download/ENCFF500YIU.bam hg19 released missing genetic modification characterization ENCFF384QMY fastq reads ENCSR709DRM ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-E2F5-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 1 50 single-ended 551147750 Kevin White, UChicago fd0cc1c9350b278d35ff833a5129ca18 SRA:SRR6213942 https://www.encodeproject.org/files/ENCFF384QMY/@@download/ENCFF384QMY.fastq.gz Illumina HiSeq 2000 /files/ENCFF043SJU/, /files/ENCFF268CSZ/ released missing genetic modification characterization ENCFF633GWT fastq reads ENCSR709DRM ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-E2F5-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 1 50 single-ended 696464395 Kevin White, UChicago bfdf9cd4f6470cc065f1e6a06f68f88b SRA:SRR6213944 https://www.encodeproject.org/files/ENCFF633GWT/@@download/ENCFF633GWT.fastq.gz Illumina HiSeq 2000 /files/ENCFF043SJU/, /files/ENCFF268CSZ/ released missing genetic modification characterization ENCFF903EIQ fastq reads ENCSR709DRM ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-E2F5-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 1 50 single-ended 555246508 Kevin White, UChicago 443c5253814ad3a2d2eb2ef66f735fc6 SRA:SRR6213943 https://www.encodeproject.org/files/ENCFF903EIQ/@@download/ENCFF903EIQ.fastq.gz Illumina HiSeq 2500 /files/ENCFF043SJU/, /files/ENCFF268CSZ/ released missing genetic modification characterization ENCFF395ENN fastq reads ENCSR709DRM ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-E2F5-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 1 50 single-ended 682621126 Kevin White, UChicago b63cf250434f4c66add00d32397fb799 SRA:SRR6213945 https://www.encodeproject.org/files/ENCFF395ENN/@@download/ENCFF395ENN.fastq.gz Illumina HiSeq 2500 /files/ENCFF043SJU/, /files/ENCFF268CSZ/ released missing genetic modification characterization ENCFF938KSJ bam alignments ENCSR709DRM ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-E2F5-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 50 ENCFF384QMY, ENCFF807MUK, ENCFF903EIQ 898063435 ENCODE Processing Pipeline ee965755ed5c75600ca2b650ccfb2e93 https://www.encodeproject.org/files/ENCFF938KSJ/@@download/ENCFF938KSJ.bam hg19 released missing genetic modification characterization ENCFF642OQJ bam alignments ENCSR709DRM ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-E2F5-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 50 ENCFF395ENN, ENCFF633GWT, ENCFF807MUK 1108681140 ENCODE Processing Pipeline ff5f766c0f696fb3986adc9246165a80 https://www.encodeproject.org/files/ENCFF642OQJ/@@download/ENCFF642OQJ.bam hg19 released missing genetic modification characterization ENCFF554YSA bigWig signal p-value ENCSR709DRM ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-E2F5-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF642OQJ, ENCFF831FLE, ENCFF938KSJ 750299474 ENCODE Processing Pipeline f6c86eaee23515d3a48c497d93f6d567 https://www.encodeproject.org/files/ENCFF554YSA/@@download/ENCFF554YSA.bigWig hg19 released missing genetic modification characterization ENCFF348YZD bigWig signal p-value ENCSR709DRM ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-E2F5-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF831FLE, ENCFF938KSJ 566430685 ENCODE Processing Pipeline 21479cc01b4a7ada5d28eea797ff183f https://www.encodeproject.org/files/ENCFF348YZD/@@download/ENCFF348YZD.bigWig hg19 released missing genetic modification characterization ENCFF985KZR bigWig fold change over control ENCSR709DRM ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-E2F5-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF831FLE, ENCFF938KSJ 532872878 ENCODE Processing Pipeline 373ed8cf92936ec272fd3770ec80a097 https://www.encodeproject.org/files/ENCFF985KZR/@@download/ENCFF985KZR.bigWig hg19 released missing genetic modification characterization ENCFF300ZPK bigWig signal p-value ENCSR709DRM ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-E2F5-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF642OQJ, ENCFF831FLE 640376232 ENCODE Processing Pipeline 2f00a0ff533074c39e0009fad4be8f9c https://www.encodeproject.org/files/ENCFF300ZPK/@@download/ENCFF300ZPK.bigWig hg19 released missing genetic modification characterization ENCFF606WVG bigWig fold change over control ENCSR709DRM ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-E2F5-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF642OQJ, ENCFF831FLE 609729806 ENCODE Processing Pipeline 780aa3fc96fd52c17175cc8b49fba0ba https://www.encodeproject.org/files/ENCFF606WVG/@@download/ENCFF606WVG.bigWig hg19 released missing genetic modification characterization ENCFF360GCE bed narrowPeak peaks ENCSR709DRM ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-E2F5-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF642OQJ, ENCFF831FLE 6900000 ENCODE Processing Pipeline 17198703d90150d4dc8dd66cdc74f495 https://www.encodeproject.org/files/ENCFF360GCE/@@download/ENCFF360GCE.bed.gz hg19 released missing genetic modification characterization ENCFF672OUR bigWig fold change over control ENCSR709DRM ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-E2F5-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF642OQJ, ENCFF831FLE, ENCFF938KSJ 882149372 ENCODE Processing Pipeline 3375de99cd191a9e9e0e8105fdae22c8 https://www.encodeproject.org/files/ENCFF672OUR/@@download/ENCFF672OUR.bigWig hg19 released missing genetic modification characterization ENCFF118EXB bed narrowPeak peaks ENCSR709DRM ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-E2F5-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF831FLE, ENCFF938KSJ 6685960 ENCODE Processing Pipeline 80b3bb1da20547a692d75886b0ce8f51 https://www.encodeproject.org/files/ENCFF118EXB/@@download/ENCFF118EXB.bed.gz hg19 released missing genetic modification characterization ENCFF321FDW bed narrowPeak peaks ENCSR709DRM ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-E2F5-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF642OQJ, ENCFF831FLE, ENCFF938KSJ 7157256 ENCODE Processing Pipeline f409e3573e9634709e8bc3a394e46f13 https://www.encodeproject.org/files/ENCFF321FDW/@@download/ENCFF321FDW.bed.gz hg19 released missing genetic modification characterization ENCFF425TIX bigBed narrowPeak peaks ENCSR709DRM ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-E2F5-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF118EXB 12836804 ENCODE Processing Pipeline 3632240115a6dacbe2822694a4476d90 https://www.encodeproject.org/files/ENCFF425TIX/@@download/ENCFF425TIX.bigBed hg19 released missing genetic modification characterization ENCFF772VCR bigBed narrowPeak peaks ENCSR709DRM ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-E2F5-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF321FDW 12712739 ENCODE Processing Pipeline 924dad735f6c0836c9e8d138330560f7 https://www.encodeproject.org/files/ENCFF772VCR/@@download/ENCFF772VCR.bigBed hg19 released missing genetic modification characterization ENCFF192XXU bigBed narrowPeak peaks ENCSR709DRM ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-E2F5-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF360GCE 12806764 ENCODE Processing Pipeline 0d64035560e151304594737f865012bf https://www.encodeproject.org/files/ENCFF192XXU/@@download/ENCFF192XXU.bigBed hg19 released missing genetic modification characterization ENCFF141IWK bam unfiltered alignments ENCSR709DRM ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-E2F5-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 50 ENCFF384QMY, ENCFF643CGH, ENCFF903EIQ 1193206239 ENCODE Processing Pipeline b2688ef1ec44386536eaef088823bbf1 https://www.encodeproject.org/files/ENCFF141IWK/@@download/ENCFF141IWK.bam GRCh38 released missing genetic modification characterization ENCFF597NPX bam unfiltered alignments ENCSR709DRM ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-E2F5-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 50 ENCFF395ENN, ENCFF633GWT, ENCFF643CGH 1473332464 ENCODE Processing Pipeline dc744da6e2c8b94282e56d89cb690462 https://www.encodeproject.org/files/ENCFF597NPX/@@download/ENCFF597NPX.bam GRCh38 released missing genetic modification characterization ENCFF980YNA bam alignments ENCSR709DRM ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-E2F5-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 50 ENCFF384QMY, ENCFF643CGH, ENCFF903EIQ 897427953 ENCODE Processing Pipeline 0a8f3fb2c56241f5a823f48881f3d732 https://www.encodeproject.org/files/ENCFF980YNA/@@download/ENCFF980YNA.bam GRCh38 released missing genetic modification characterization ENCFF564FBJ bam alignments ENCSR709DRM ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-E2F5-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 50 ENCFF395ENN, ENCFF633GWT, ENCFF643CGH 1107993140 ENCODE Processing Pipeline 3b7c352c7bc811507cabe173b6b2aefe https://www.encodeproject.org/files/ENCFF564FBJ/@@download/ENCFF564FBJ.bam GRCh38 released missing genetic modification characterization ENCFF082YHP bigWig signal p-value ENCSR709DRM ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-E2F5-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF564FBJ, ENCFF967YTY 646219112 ENCODE Processing Pipeline 0e597f4d057440a4115c48d38726e949 https://www.encodeproject.org/files/ENCFF082YHP/@@download/ENCFF082YHP.bigWig GRCh38 released missing genetic modification characterization ENCFF149BCZ bigWig signal p-value ENCSR709DRM ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-E2F5-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF967YTY, ENCFF980YNA 514246274 ENCODE Processing Pipeline ece71b7502f782ba6671e9a6fc7d60dd https://www.encodeproject.org/files/ENCFF149BCZ/@@download/ENCFF149BCZ.bigWig GRCh38 released missing genetic modification characterization ENCFF564NGI bigWig fold change over control ENCSR709DRM ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-E2F5-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF967YTY, ENCFF980YNA 522315907 ENCODE Processing Pipeline 05389dd64cadf017b927bf15c54bda6e https://www.encodeproject.org/files/ENCFF564NGI/@@download/ENCFF564NGI.bigWig GRCh38 released missing genetic modification characterization ENCFF211UMN bigWig signal p-value ENCSR709DRM ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-E2F5-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF564FBJ, ENCFF967YTY, ENCFF980YNA 749998654 ENCODE Processing Pipeline cdec9994202401cb7224f2684a9e45d0 https://www.encodeproject.org/files/ENCFF211UMN/@@download/ENCFF211UMN.bigWig GRCh38 released missing genetic modification characterization ENCFF423SUS bigWig fold change over control ENCSR709DRM ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-E2F5-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF564FBJ, ENCFF967YTY 610038420 ENCODE Processing Pipeline e7aa42f821232a70d25906451e21961b https://www.encodeproject.org/files/ENCFF423SUS/@@download/ENCFF423SUS.bigWig GRCh38 released missing genetic modification characterization ENCFF740EXI bigWig fold change over control ENCSR709DRM ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-E2F5-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF564FBJ, ENCFF967YTY, ENCFF980YNA 880436277 ENCODE Processing Pipeline 673ea32f51b0c1c6db52b59e08cad983 https://www.encodeproject.org/files/ENCFF740EXI/@@download/ENCFF740EXI.bigWig GRCh38 released missing genetic modification characterization ENCFF999QIF bed narrowPeak peaks ENCSR709DRM ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-E2F5-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF967YTY, ENCFF980YNA 6536463 ENCODE Processing Pipeline 4b14944dc1e84d9470f143200eb803c7 https://www.encodeproject.org/files/ENCFF999QIF/@@download/ENCFF999QIF.bed.gz GRCh38 released missing genetic modification characterization ENCFF998EXR bed narrowPeak peaks ENCSR709DRM ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-E2F5-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF564FBJ, ENCFF967YTY 6737883 ENCODE Processing Pipeline 62d54a894a5bf98f85504ae4e798dad5 https://www.encodeproject.org/files/ENCFF998EXR/@@download/ENCFF998EXR.bed.gz GRCh38 released missing genetic modification characterization ENCFF899QEM bed narrowPeak peaks ENCSR709DRM ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-E2F5-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF564FBJ, ENCFF967YTY, ENCFF980YNA 7067249 ENCODE Processing Pipeline 7668d8140d47eba717f0225731632a00 https://www.encodeproject.org/files/ENCFF899QEM/@@download/ENCFF899QEM.bed.gz GRCh38 released missing genetic modification characterization ENCFF929OPJ bigBed narrowPeak peaks ENCSR709DRM ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-E2F5-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF999QIF 12836842 ENCODE Processing Pipeline 5223ed4b714f17dfa935dced6f95745a https://www.encodeproject.org/files/ENCFF929OPJ/@@download/ENCFF929OPJ.bigBed GRCh38 released missing genetic modification characterization ENCFF468VJV bed narrowPeak optimal idr thresholded peaks ENCSR709DRM ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-E2F5-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF419RSJ, ENCFF899QEM, ENCFF998EXR, ENCFF999QIF 357604 ENCODE Processing Pipeline 25e42b68b18ed0ff950932ea3644dab0 https://www.encodeproject.org/files/ENCFF468VJV/@@download/ENCFF468VJV.bed.gz GRCh38 released missing genetic modification characterization ENCFF232FSG bigBed narrowPeak peaks ENCSR709DRM ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-E2F5-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF998EXR 12780017 ENCODE Processing Pipeline f4243aa1feb7aa2c070cb1bc9201d2b9 https://www.encodeproject.org/files/ENCFF232FSG/@@download/ENCFF232FSG.bigBed GRCh38 released missing genetic modification characterization ENCFF897CLD bigBed narrowPeak peaks ENCSR709DRM ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-E2F5-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF899QEM 12726123 ENCODE Processing Pipeline 3d8d0e11169cacf49c29a8afdf89caa2 https://www.encodeproject.org/files/ENCFF897CLD/@@download/ENCFF897CLD.bigBed GRCh38 released missing genetic modification characterization ENCFF339VDX bigBed narrowPeak optimal idr thresholded peaks ENCSR709DRM ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-E2F5-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF468VJV 813988 ENCODE Processing Pipeline 74891e094961cfa46e65bb09de06b8e9 https://www.encodeproject.org/files/ENCFF339VDX/@@download/ENCFF339VDX.bigBed GRCh38 released missing genetic modification characterization ENCFF178POI bigBed narrowPeak optimal idr thresholded peaks ENCSR709DRM ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-E2F5-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF356ASJ 595227 ENCODE Processing Pipeline 19ac2ab019b78031de0a19cb137f8dc0 https://www.encodeproject.org/files/ENCFF178POI/@@download/ENCFF178POI.bigBed hg19 released missing genetic modification characterization ENCFF356ASJ bed narrowPeak optimal idr thresholded peaks ENCSR709DRM ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-E2F5-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF001TDO, ENCFF118EXB, ENCFF321FDW, ENCFF360GCE 299967 ENCODE Processing Pipeline 85a7606ad879c0327dc0b15b3eec8947 https://www.encodeproject.org/files/ENCFF356ASJ/@@download/ENCFF356ASJ.bed.gz hg19 released missing genetic modification characterization ENCFF000YNT bam alignments ENCSR000EHC ChIP-seq EFO:0002067 K562 cell line Homo sapiens GTF2F1-human ENCAB000AHE DNA see document see document False 2011-10-29 ENCODE 1 ENCFF000YOM 480996849 Michael Snyder, Stanford a42edb4723be77aec7f7e4b1a6c4d33a https://www.encodeproject.org/files/ENCFF000YNT/@@download/ENCFF000YNT.bam hg19 archived borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF000YNU bam alignments ENCSR000EHC ChIP-seq EFO:0002067 K562 cell line Homo sapiens GTF2F1-human ENCAB000AHE DNA see document see document False 2011-10-29 ENCODE 2 ENCFF000YOO 373122138 Michael Snyder, Stanford dd8a115058cbeced9e3b499e125394e7 https://www.encodeproject.org/files/ENCFF000YNU/@@download/ENCFF000YNU.bam hg19 archived borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF000YNV bigBed narrowPeak peaks ENCSR000EHC ChIP-seq EFO:0002067 K562 cell line Homo sapiens GTF2F1-human ENCAB000AHE DNA see document see document False 2011-10-29 ENCODE ENCFF001VNG 964568 Michael Snyder, Stanford 3430aca64389e8c45e015777a631ad7f https://www.encodeproject.org/files/ENCFF000YNV/@@download/ENCFF000YNV.bigBed hg19 archived borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF000YOA bigWig signal ENCSR000EHC ChIP-seq EFO:0002067 K562 cell line Homo sapiens GTF2F1-human ENCAB000AHE DNA see document see document False 2011-10-29 ENCODE 309241361 Michael Snyder, Stanford 39c55409551d7f91f79ee0f3a91761d9 https://www.encodeproject.org/files/ENCFF000YOA/@@download/ENCFF000YOA.bigWig hg19 archived borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample, missing derived_from ENCFF000YOM fastq reads ENCSR000EHC ChIP-seq EFO:0002067 K562 cell line Homo sapiens GTF2F1-human ENCAB000AHE DNA see document see document False 2011-10-29 ENCODE 1 1 36 single-ended 1019972437 Michael Snyder, Stanford ef4217456730e8ffb95a4eaaa5ef6f3c https://www.encodeproject.org/files/ENCFF000YOM/@@download/ENCFF000YOM.fastq.gz Illumina Genome Analyzer /files/ENCFF000YRB/ released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF000YOO fastq reads ENCSR000EHC ChIP-seq EFO:0002067 K562 cell line Homo sapiens GTF2F1-human ENCAB000AHE DNA see document see document False 2011-10-29 ENCODE 2 1 36 single-ended 682265445 Michael Snyder, Stanford 62481764ed2ee4797965e67086924105 https://www.encodeproject.org/files/ENCFF000YOO/@@download/ENCFF000YOO.fastq.gz Illumina Genome Analyzer /files/ENCFF000YRB/ released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF001VNG bed narrowPeak peaks ENCSR000EHC ChIP-seq EFO:0002067 K562 cell line Homo sapiens GTF2F1-human ENCAB000AHE DNA see document see document False 2011-10-29 ENCODE 408221 Michael Snyder, Stanford 24c2a5ba894e0cc0c6527157d5a9d17e https://www.encodeproject.org/files/ENCFF001VNG/@@download/ENCFF001VNG.bed.gz hg19 archived borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample, missing derived_from ENCFF002CWS bed narrowPeak optimal idr thresholded peaks ENCSR000EHC ChIP-seq EFO:0002067 K562 cell line Homo sapiens GTF2F1-human ENCAB000AHE DNA see document see document False 2011-10-29 ENCODE 95959 ENCODE Consortium Analysis Working Group 3258cc485e176b5d51866301f5e00016 https://www.encodeproject.org/files/ENCFF002CWS/@@download/ENCFF002CWS.bed.gz hg19 archived borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample, missing derived_from ENCFF505YNZ bigBed narrowPeak optimal idr thresholded peaks ENCSR000EHC ChIP-seq EFO:0002067 K562 cell line Homo sapiens GTF2F1-human ENCAB000AHE DNA see document see document False 2011-10-29 ENCODE ENCFF002CWS 324081 ENCODE Consortium f765058d853b61757dbf1378dd741a08 https://www.encodeproject.org/files/ENCFF505YNZ/@@download/ENCFF505YNZ.bigBed hg19 archived borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF073UUX bam unfiltered alignments ENCSR000EHC ChIP-seq EFO:0002067 K562 cell line Homo sapiens GTF2F1-human ENCAB000AHE DNA see document see document False 2011-10-29 ENCODE 2 36 ENCFF000YOO, ENCFF643CGH 858885972 ENCODE Processing Pipeline 2868786ec46560e5749cc4e87b9fe392 https://www.encodeproject.org/files/ENCFF073UUX/@@download/ENCFF073UUX.bam GRCh38 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF215TDO bam alignments ENCSR000EHC ChIP-seq EFO:0002067 K562 cell line Homo sapiens GTF2F1-human ENCAB000AHE DNA see document see document False 2011-10-29 ENCODE 2 36 ENCFF000YOO, ENCFF643CGH 573011085 ENCODE Processing Pipeline 4ed107a1933fa1398e19d7f2d5e5552f https://www.encodeproject.org/files/ENCFF215TDO/@@download/ENCFF215TDO.bam GRCh38 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF040MZK bam alignments ENCSR000EHC ChIP-seq EFO:0002067 K562 cell line Homo sapiens GTF2F1-human ENCAB000AHE DNA see document see document False 2011-10-29 ENCODE 1 36 ENCFF000YOM, ENCFF643CGH 810735836 ENCODE Processing Pipeline bdaacde521afefa9db075e602f1d84f9 https://www.encodeproject.org/files/ENCFF040MZK/@@download/ENCFF040MZK.bam GRCh38 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF376DQB bam unfiltered alignments ENCSR000EHC ChIP-seq EFO:0002067 K562 cell line Homo sapiens GTF2F1-human ENCAB000AHE DNA see document see document False 2011-10-29 ENCODE 1 36 ENCFF000YOM, ENCFF643CGH 1281609402 ENCODE Processing Pipeline e4ff5e65f3501ae8cb18c0555fdfdd2c https://www.encodeproject.org/files/ENCFF376DQB/@@download/ENCFF376DQB.bam GRCh38 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF500TMA bam unfiltered alignments ENCSR000EHC ChIP-seq EFO:0002067 K562 cell line Homo sapiens GTF2F1-human ENCAB000AHE DNA see document see document False 2011-10-29 ENCODE 2 36 ENCFF000YOO, ENCFF807MUK 854928621 ENCODE Processing Pipeline 694d9dd57c9a5841406096c235255065 https://www.encodeproject.org/files/ENCFF500TMA/@@download/ENCFF500TMA.bam hg19 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF120JUM bam alignments ENCSR000EHC ChIP-seq EFO:0002067 K562 cell line Homo sapiens GTF2F1-human ENCAB000AHE DNA see document see document False 2011-10-29 ENCODE 2 36 ENCFF000YOO, ENCFF807MUK 573500407 ENCODE Processing Pipeline bd09f0c0798000d350ec5272f95fc614 https://www.encodeproject.org/files/ENCFF120JUM/@@download/ENCFF120JUM.bam hg19 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF698GEX bam alignments ENCSR000EHC ChIP-seq EFO:0002067 K562 cell line Homo sapiens GTF2F1-human ENCAB000AHE DNA see document see document False 2011-10-29 ENCODE 1 36 ENCFF000YOM, ENCFF807MUK 811119361 ENCODE Processing Pipeline 66906a4f30561d0155ca35e9f45a9aae https://www.encodeproject.org/files/ENCFF698GEX/@@download/ENCFF698GEX.bam hg19 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF626NOR bam unfiltered alignments ENCSR000EHC ChIP-seq EFO:0002067 K562 cell line Homo sapiens GTF2F1-human ENCAB000AHE DNA see document see document False 2011-10-29 ENCODE 1 36 ENCFF000YOM, ENCFF807MUK 1274496254 ENCODE Processing Pipeline 48f09b2e474a951bc6e20e17b2eff813 https://www.encodeproject.org/files/ENCFF626NOR/@@download/ENCFF626NOR.bam hg19 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF578HCR bigWig signal p-value ENCSR000EHC ChIP-seq EFO:0002067 K562 cell line Homo sapiens GTF2F1-human ENCAB000AHE DNA see document see document False 2011-10-29 ENCODE 2 ENCFF023NGN, ENCFF215TDO 418142032 ENCODE Processing Pipeline daf5db62f0b06acbe01c815d7a32a01e https://www.encodeproject.org/files/ENCFF578HCR/@@download/ENCFF578HCR.bigWig GRCh38 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF680NRO bigWig signal p-value ENCSR000EHC ChIP-seq EFO:0002067 K562 cell line Homo sapiens GTF2F1-human ENCAB000AHE DNA see document see document False 2011-10-29 ENCODE 1 ENCFF023NGN, ENCFF040MZK 458990074 ENCODE Processing Pipeline 451f158169628f7ab10b648fc1910daa https://www.encodeproject.org/files/ENCFF680NRO/@@download/ENCFF680NRO.bigWig GRCh38 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF203MMG bigWig signal p-value ENCSR000EHC ChIP-seq EFO:0002067 K562 cell line Homo sapiens GTF2F1-human ENCAB000AHE DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF023NGN, ENCFF040MZK, ENCFF215TDO 572717274 ENCODE Processing Pipeline d44bf4ddd63146ad07a774d3c4010456 https://www.encodeproject.org/files/ENCFF203MMG/@@download/ENCFF203MMG.bigWig GRCh38 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF889HNR bigWig fold change over control ENCSR000EHC ChIP-seq EFO:0002067 K562 cell line Homo sapiens GTF2F1-human ENCAB000AHE DNA see document see document False 2011-10-29 ENCODE 1 ENCFF023NGN, ENCFF040MZK 393545061 ENCODE Processing Pipeline d70d560495a461788fb1b3accc59bd6a https://www.encodeproject.org/files/ENCFF889HNR/@@download/ENCFF889HNR.bigWig GRCh38 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF349YBX bigWig fold change over control ENCSR000EHC ChIP-seq EFO:0002067 K562 cell line Homo sapiens GTF2F1-human ENCAB000AHE DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF023NGN, ENCFF040MZK, ENCFF215TDO 602017180 ENCODE Processing Pipeline 9276ea91f719d08d47550160f9d5e148 https://www.encodeproject.org/files/ENCFF349YBX/@@download/ENCFF349YBX.bigWig GRCh38 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF943IJB bigWig fold change over control ENCSR000EHC ChIP-seq EFO:0002067 K562 cell line Homo sapiens GTF2F1-human ENCAB000AHE DNA see document see document False 2011-10-29 ENCODE 2 ENCFF023NGN, ENCFF215TDO 310894183 ENCODE Processing Pipeline 02e81bf8df96fdafe0aa1a8332cc80af https://www.encodeproject.org/files/ENCFF943IJB/@@download/ENCFF943IJB.bigWig GRCh38 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF392JBV bed narrowPeak peaks ENCSR000EHC ChIP-seq EFO:0002067 K562 cell line Homo sapiens GTF2F1-human ENCAB000AHE DNA see document see document False 2011-10-29 ENCODE 2 ENCFF023NGN, ENCFF215TDO 4803335 ENCODE Processing Pipeline e891117a4f0d2ce918017f7d7a9012ea https://www.encodeproject.org/files/ENCFF392JBV/@@download/ENCFF392JBV.bed.gz GRCh38 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF886RXI bigBed narrowPeak peaks ENCSR000EHC ChIP-seq EFO:0002067 K562 cell line Homo sapiens GTF2F1-human ENCAB000AHE DNA see document see document False 2011-10-29 ENCODE 1 ENCFF718UFW 10941624 ENCODE Processing Pipeline e56378314d1a0d16a050b030e676a020 https://www.encodeproject.org/files/ENCFF886RXI/@@download/ENCFF886RXI.bigBed GRCh38 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF718UFW bed narrowPeak peaks ENCSR000EHC ChIP-seq EFO:0002067 K562 cell line Homo sapiens GTF2F1-human ENCAB000AHE DNA see document see document False 2011-10-29 ENCODE 1 ENCFF023NGN, ENCFF040MZK 4660940 ENCODE Processing Pipeline 1a9d561713b44a41317872fad7b08e1b https://www.encodeproject.org/files/ENCFF718UFW/@@download/ENCFF718UFW.bed.gz GRCh38 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF008XRW bigBed narrowPeak peaks ENCSR000EHC ChIP-seq EFO:0002067 K562 cell line Homo sapiens GTF2F1-human ENCAB000AHE DNA see document see document False 2011-10-29 ENCODE 2 ENCFF392JBV 10748814 ENCODE Processing Pipeline cb808c67616983d3ce32969445144d30 https://www.encodeproject.org/files/ENCFF008XRW/@@download/ENCFF008XRW.bigBed GRCh38 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF569HGB bigBed narrowPeak peaks ENCSR000EHC ChIP-seq EFO:0002067 K562 cell line Homo sapiens GTF2F1-human ENCAB000AHE DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF145AYG 13324431 ENCODE Processing Pipeline 1c2fff3c4c6fcf2ddb8437f7b4dd4e4d https://www.encodeproject.org/files/ENCFF569HGB/@@download/ENCFF569HGB.bigBed GRCh38 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF145AYG bed narrowPeak peaks ENCSR000EHC ChIP-seq EFO:0002067 K562 cell line Homo sapiens GTF2F1-human ENCAB000AHE DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF023NGN, ENCFF040MZK, ENCFF215TDO 5614865 ENCODE Processing Pipeline e04d5a715e6631ebc52fdcfb1cd924df https://www.encodeproject.org/files/ENCFF145AYG/@@download/ENCFF145AYG.bed.gz GRCh38 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF115DVM bed narrowPeak conservative idr thresholded peaks ENCSR000EHC ChIP-seq EFO:0002067 K562 cell line Homo sapiens GTF2F1-human ENCAB000AHE DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF145AYG, ENCFF392JBV, ENCFF419RSJ, ENCFF718UFW 92303 ENCODE Processing Pipeline b0d6b3ddfaa8c7712061d7f3ea595c6e https://www.encodeproject.org/files/ENCFF115DVM/@@download/ENCFF115DVM.bed.gz GRCh38 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF509EPP bigBed narrowPeak optimal idr thresholded peaks ENCSR000EHC ChIP-seq EFO:0002067 K562 cell line Homo sapiens GTF2F1-human ENCAB000AHE DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF478HYJ 235804 ENCODE Processing Pipeline 69cf682c49b70823be058bb1dd0b2b3f https://www.encodeproject.org/files/ENCFF509EPP/@@download/ENCFF509EPP.bigBed GRCh38 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF391AXM bigBed narrowPeak conservative idr thresholded peaks ENCSR000EHC ChIP-seq EFO:0002067 K562 cell line Homo sapiens GTF2F1-human ENCAB000AHE DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF115DVM 222988 ENCODE Processing Pipeline 1070e170653ab8860fe769103380a3f1 https://www.encodeproject.org/files/ENCFF391AXM/@@download/ENCFF391AXM.bigBed GRCh38 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF478HYJ bed narrowPeak optimal idr thresholded peaks ENCSR000EHC ChIP-seq EFO:0002067 K562 cell line Homo sapiens GTF2F1-human ENCAB000AHE DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF145AYG, ENCFF392JBV, ENCFF419RSJ, ENCFF718UFW 100269 ENCODE Processing Pipeline 853e928757ef6c6998959eb6e2068ef3 https://www.encodeproject.org/files/ENCFF478HYJ/@@download/ENCFF478HYJ.bed.gz GRCh38 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF802KBK bigWig signal p-value ENCSR000EHC ChIP-seq EFO:0002067 K562 cell line Homo sapiens GTF2F1-human ENCAB000AHE DNA see document see document False 2011-10-29 ENCODE 1 ENCFF698GEX, ENCFF710NTS 423985138 ENCODE Processing Pipeline cb137ea6dce89b27102722af1c3b689b https://www.encodeproject.org/files/ENCFF802KBK/@@download/ENCFF802KBK.bigWig hg19 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF087PUW bigWig fold change over control ENCSR000EHC ChIP-seq EFO:0002067 K562 cell line Homo sapiens GTF2F1-human ENCAB000AHE DNA see document see document False 2011-10-29 ENCODE 1 ENCFF698GEX, ENCFF710NTS 393934685 ENCODE Processing Pipeline fd833ef3d7e17d6ea59f2ace428ae0b2 https://www.encodeproject.org/files/ENCFF087PUW/@@download/ENCFF087PUW.bigWig hg19 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF224MEV bigWig signal p-value ENCSR000EHC ChIP-seq EFO:0002067 K562 cell line Homo sapiens GTF2F1-human ENCAB000AHE DNA see document see document False 2011-10-29 ENCODE 2 ENCFF120JUM, ENCFF710NTS 523639359 ENCODE Processing Pipeline d6d5b89e38bd53d9707ae16b2c6e7633 https://www.encodeproject.org/files/ENCFF224MEV/@@download/ENCFF224MEV.bigWig hg19 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF701UPA bigWig signal p-value ENCSR000EHC ChIP-seq EFO:0002067 K562 cell line Homo sapiens GTF2F1-human ENCAB000AHE DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF120JUM, ENCFF698GEX, ENCFF710NTS 580784730 ENCODE Processing Pipeline 6d05b2acb5c2df695de70401a524112d https://www.encodeproject.org/files/ENCFF701UPA/@@download/ENCFF701UPA.bigWig hg19 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF592EHF bigWig fold change over control ENCSR000EHC ChIP-seq EFO:0002067 K562 cell line Homo sapiens GTF2F1-human ENCAB000AHE DNA see document see document False 2011-10-29 ENCODE 2 ENCFF120JUM, ENCFF710NTS 323992436 ENCODE Processing Pipeline 04027b931c8ceff781aefe86d9bfe73a https://www.encodeproject.org/files/ENCFF592EHF/@@download/ENCFF592EHF.bigWig hg19 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF050ZBY bigWig fold change over control ENCSR000EHC ChIP-seq EFO:0002067 K562 cell line Homo sapiens GTF2F1-human ENCAB000AHE DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF120JUM, ENCFF698GEX, ENCFF710NTS 618142431 ENCODE Processing Pipeline ea7127af7ad9ceb5b78ef3f55ff09c99 https://www.encodeproject.org/files/ENCFF050ZBY/@@download/ENCFF050ZBY.bigWig hg19 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF220GLK bed narrowPeak peaks ENCSR000EHC ChIP-seq EFO:0002067 K562 cell line Homo sapiens GTF2F1-human ENCAB000AHE DNA see document see document False 2011-10-29 ENCODE 1 ENCFF698GEX, ENCFF710NTS 4742038 ENCODE Processing Pipeline eed575974928ae29e2b021dd1f635577 https://www.encodeproject.org/files/ENCFF220GLK/@@download/ENCFF220GLK.bed.gz hg19 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF614RPL bed narrowPeak peaks ENCSR000EHC ChIP-seq EFO:0002067 K562 cell line Homo sapiens GTF2F1-human ENCAB000AHE DNA see document see document False 2011-10-29 ENCODE 2 ENCFF120JUM, ENCFF710NTS 4859422 ENCODE Processing Pipeline c2be15b33254bff97f9bbe443bdf3db2 https://www.encodeproject.org/files/ENCFF614RPL/@@download/ENCFF614RPL.bed.gz hg19 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF123HUT bed narrowPeak peaks ENCSR000EHC ChIP-seq EFO:0002067 K562 cell line Homo sapiens GTF2F1-human ENCAB000AHE DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF120JUM, ENCFF698GEX, ENCFF710NTS 5619346 ENCODE Processing Pipeline 41407496caad251a815f422fa7b4267d https://www.encodeproject.org/files/ENCFF123HUT/@@download/ENCFF123HUT.bed.gz hg19 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF265XSB bigBed narrowPeak peaks ENCSR000EHC ChIP-seq EFO:0002067 K562 cell line Homo sapiens GTF2F1-human ENCAB000AHE DNA see document see document False 2011-10-29 ENCODE 1 ENCFF220GLK 10982338 ENCODE Processing Pipeline 3f111bea65f9269f852b6bcc453ca881 https://www.encodeproject.org/files/ENCFF265XSB/@@download/ENCFF265XSB.bigBed hg19 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF089CSQ bigBed narrowPeak peaks ENCSR000EHC ChIP-seq EFO:0002067 K562 cell line Homo sapiens GTF2F1-human ENCAB000AHE DNA see document see document False 2011-10-29 ENCODE 2 ENCFF614RPL 10757250 ENCODE Processing Pipeline e5cfe181997281664fb4f54167de9c52 https://www.encodeproject.org/files/ENCFF089CSQ/@@download/ENCFF089CSQ.bigBed hg19 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF905DYM bigBed narrowPeak peaks ENCSR000EHC ChIP-seq EFO:0002067 K562 cell line Homo sapiens GTF2F1-human ENCAB000AHE DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF123HUT 13319785 ENCODE Processing Pipeline 1387dc257d879b412476c5c7db6a8318 https://www.encodeproject.org/files/ENCFF905DYM/@@download/ENCFF905DYM.bigBed hg19 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF334QGA bed narrowPeak conservative idr thresholded peaks ENCSR000EHC ChIP-seq EFO:0002067 K562 cell line Homo sapiens GTF2F1-human ENCAB000AHE DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF001TDO, ENCFF123HUT, ENCFF220GLK, ENCFF614RPL 88818 ENCODE Processing Pipeline 07ed23126b136456eb0fd11b0987c036 https://www.encodeproject.org/files/ENCFF334QGA/@@download/ENCFF334QGA.bed.gz hg19 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF667NOP bigBed narrowPeak conservative idr thresholded peaks ENCSR000EHC ChIP-seq EFO:0002067 K562 cell line Homo sapiens GTF2F1-human ENCAB000AHE DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF334QGA 217133 ENCODE Processing Pipeline 603f066ad61b6208cae1802589cc62b2 https://www.encodeproject.org/files/ENCFF667NOP/@@download/ENCFF667NOP.bigBed hg19 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF156WRH bed narrowPeak optimal idr thresholded peaks ENCSR000EHC ChIP-seq EFO:0002067 K562 cell line Homo sapiens GTF2F1-human ENCAB000AHE DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF001TDO, ENCFF123HUT, ENCFF220GLK, ENCFF614RPL 94699 ENCODE Processing Pipeline 3412d376260c85c185a7efc28f868928 https://www.encodeproject.org/files/ENCFF156WRH/@@download/ENCFF156WRH.bed.gz hg19 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF132EKK bigBed narrowPeak optimal idr thresholded peaks ENCSR000EHC ChIP-seq EFO:0002067 K562 cell line Homo sapiens GTF2F1-human ENCAB000AHE DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF156WRH 226533 ENCODE Processing Pipeline 308bba0625cbdc574a8df6ee6681c3a9 https://www.encodeproject.org/files/ENCFF132EKK/@@download/ENCFF132EKK.bigBed hg19 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF261LPC bam unfiltered alignments ENCSR894CGX ChIP-seq EFO:0002067 K562 cell line Homo sapiens SUPT5H-human ENCAB349SAR DNA False 2016-10-14 ENCODE 2 100 ENCFF077SPQ, ENCFF383EJJ, ENCFF807MUK 5282064933 ENCODE Processing Pipeline 7b1e25af7452b93c51d905817ffaded7 https://www.encodeproject.org/files/ENCFF261LPC/@@download/ENCFF261LPC.bam hg19 released ENCFF943VPJ bam unfiltered alignments ENCSR894CGX ChIP-seq EFO:0002067 K562 cell line Homo sapiens SUPT5H-human ENCAB349SAR DNA False 2016-10-14 ENCODE 1 100 ENCFF086VLI, ENCFF397FZD, ENCFF807MUK 4962232551 ENCODE Processing Pipeline 32ccd034412b338f23efe611040ebd57 https://www.encodeproject.org/files/ENCFF943VPJ/@@download/ENCFF943VPJ.bam hg19 released ENCFF397FZD fastq reads ENCSR894CGX ChIP-seq EFO:0002067 K562 cell line Homo sapiens SUPT5H-human ENCAB349SAR DNA False 2016-10-14 ENCODE 1 1 100 paired-ended 2 ENCFF086VLI 2372041768 Michael Snyder, Stanford 3d8ccb74ed6f732b3635ecc32833f082 SRA:SRR5112232 https://www.encodeproject.org/files/ENCFF397FZD/@@download/ENCFF397FZD.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFH/ released ENCFF086VLI fastq reads ENCSR894CGX ChIP-seq EFO:0002067 K562 cell line Homo sapiens SUPT5H-human ENCAB349SAR DNA False 2016-10-14 ENCODE 1 1 100 paired-ended 1 ENCFF397FZD 2269603183 Michael Snyder, Stanford 66e08de1a29268bf9f57506507c46e92 SRA:SRR5112232 https://www.encodeproject.org/files/ENCFF086VLI/@@download/ENCFF086VLI.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFF/ released ENCFF383EJJ fastq reads ENCSR894CGX ChIP-seq EFO:0002067 K562 cell line Homo sapiens SUPT5H-human ENCAB349SAR DNA False 2016-10-14 ENCODE 2 1 100 paired-ended 1 ENCFF077SPQ 2425393058 Michael Snyder, Stanford 7e490dd4fdb341e175af379c4676454e SRA:SRR5112233 https://www.encodeproject.org/files/ENCFF383EJJ/@@download/ENCFF383EJJ.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFD/ released ENCFF077SPQ fastq reads ENCSR894CGX ChIP-seq EFO:0002067 K562 cell line Homo sapiens SUPT5H-human ENCAB349SAR DNA False 2016-10-14 ENCODE 2 1 100 paired-ended 2 ENCFF383EJJ 2551880790 Michael Snyder, Stanford 43b2c621d4e00e9b7418f5b1df90cc67 SRA:SRR5112233 https://www.encodeproject.org/files/ENCFF077SPQ/@@download/ENCFF077SPQ.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFA/ released ENCFF204XLM bam alignments ENCSR894CGX ChIP-seq EFO:0002067 K562 cell line Homo sapiens SUPT5H-human ENCAB349SAR DNA False 2016-10-14 ENCODE 2 100 ENCFF077SPQ, ENCFF383EJJ, ENCFF807MUK 4564416436 ENCODE Processing Pipeline 71f5335d0d8406345f879f3227e8f545 https://www.encodeproject.org/files/ENCFF204XLM/@@download/ENCFF204XLM.bam hg19 released ENCFF158LEE bam alignments ENCSR894CGX ChIP-seq EFO:0002067 K562 cell line Homo sapiens SUPT5H-human ENCAB349SAR DNA False 2016-10-14 ENCODE 1 100 ENCFF086VLI, ENCFF397FZD, ENCFF807MUK 4318343333 ENCODE Processing Pipeline 3a2b441dbf101330824363504ddf2bf8 https://www.encodeproject.org/files/ENCFF158LEE/@@download/ENCFF158LEE.bam hg19 released ENCFF032RUN bigWig signal p-value ENCSR894CGX ChIP-seq EFO:0002067 K562 cell line Homo sapiens SUPT5H-human ENCAB349SAR DNA False 2016-10-14 ENCODE 1 ENCFF158LEE, ENCFF581ZJL 1096932072 ENCODE Processing Pipeline d474a7a5727e0d3b462c15805f6e27e8 https://www.encodeproject.org/files/ENCFF032RUN/@@download/ENCFF032RUN.bigWig hg19 released ENCFF367ETF bigWig signal p-value ENCSR894CGX ChIP-seq EFO:0002067 K562 cell line Homo sapiens SUPT5H-human ENCAB349SAR DNA False 2016-10-14 ENCODE 2 ENCFF051LWI, ENCFF204XLM 1073382315 ENCODE Processing Pipeline a8d413f7ec14f8d70d7e43e0b16b1573 https://www.encodeproject.org/files/ENCFF367ETF/@@download/ENCFF367ETF.bigWig hg19 released ENCFF072YSM bigWig signal p-value ENCSR894CGX ChIP-seq EFO:0002067 K562 cell line Homo sapiens SUPT5H-human ENCAB349SAR DNA False 2016-10-14 ENCODE 1, 2 ENCFF051LWI, ENCFF158LEE, ENCFF204XLM, ENCFF581ZJL 1941700809 ENCODE Processing Pipeline c0a1dea939494dfbad68c020696f86a6 https://www.encodeproject.org/files/ENCFF072YSM/@@download/ENCFF072YSM.bigWig hg19 released ENCFF077DRA bigWig fold change over control ENCSR894CGX ChIP-seq EFO:0002067 K562 cell line Homo sapiens SUPT5H-human ENCAB349SAR DNA False 2016-10-14 ENCODE 1 ENCFF158LEE, ENCFF581ZJL 1150775695 ENCODE Processing Pipeline 62b43d77c50b253ef063af785e12eafe https://www.encodeproject.org/files/ENCFF077DRA/@@download/ENCFF077DRA.bigWig hg19 released ENCFF385ERB bigWig fold change over control ENCSR894CGX ChIP-seq EFO:0002067 K562 cell line Homo sapiens SUPT5H-human ENCAB349SAR DNA False 2016-10-14 ENCODE 2 ENCFF051LWI, ENCFF204XLM 1145778323 ENCODE Processing Pipeline 84808f0ed371fbd8e47f8dc91a858b71 https://www.encodeproject.org/files/ENCFF385ERB/@@download/ENCFF385ERB.bigWig hg19 released ENCFF754ZCQ bigWig fold change over control ENCSR894CGX ChIP-seq EFO:0002067 K562 cell line Homo sapiens SUPT5H-human ENCAB349SAR DNA False 2016-10-14 ENCODE 1, 2 ENCFF051LWI, ENCFF158LEE, ENCFF204XLM, ENCFF581ZJL 2102280786 ENCODE Processing Pipeline 8d8ed74e669b8b13bef6d52f97b658b6 https://www.encodeproject.org/files/ENCFF754ZCQ/@@download/ENCFF754ZCQ.bigWig hg19 released ENCFF902RHR bed narrowPeak peaks ENCSR894CGX ChIP-seq EFO:0002067 K562 cell line Homo sapiens SUPT5H-human ENCAB349SAR DNA False 2016-10-14 ENCODE 1 ENCFF158LEE, ENCFF581ZJL 7166913 ENCODE Processing Pipeline c79d8243bfba48199c241beffa9d9377 https://www.encodeproject.org/files/ENCFF902RHR/@@download/ENCFF902RHR.bed.gz hg19 released ENCFF452CEM bed narrowPeak peaks ENCSR894CGX ChIP-seq EFO:0002067 K562 cell line Homo sapiens SUPT5H-human ENCAB349SAR DNA False 2016-10-14 ENCODE 2 ENCFF051LWI, ENCFF204XLM 7193583 ENCODE Processing Pipeline db70e968a32451c5251dbc5acdc4e646 https://www.encodeproject.org/files/ENCFF452CEM/@@download/ENCFF452CEM.bed.gz hg19 released ENCFF548OKF bed narrowPeak peaks ENCSR894CGX ChIP-seq EFO:0002067 K562 cell line Homo sapiens SUPT5H-human ENCAB349SAR DNA False 2016-10-14 ENCODE 1, 2 ENCFF051LWI, ENCFF158LEE, ENCFF204XLM, ENCFF581ZJL 7178717 ENCODE Processing Pipeline 5da3dc4f11b407e1074dcdf274dc4ad4 https://www.encodeproject.org/files/ENCFF548OKF/@@download/ENCFF548OKF.bed.gz hg19 released ENCFF658XXU bigBed narrowPeak peaks ENCSR894CGX ChIP-seq EFO:0002067 K562 cell line Homo sapiens SUPT5H-human ENCAB349SAR DNA False 2016-10-14 ENCODE 1 ENCFF902RHR 12198892 ENCODE Processing Pipeline 1891899f5af92fef342fd00f5f8ee579 https://www.encodeproject.org/files/ENCFF658XXU/@@download/ENCFF658XXU.bigBed hg19 released ENCFF649WPP bigBed narrowPeak peaks ENCSR894CGX ChIP-seq EFO:0002067 K562 cell line Homo sapiens SUPT5H-human ENCAB349SAR DNA False 2016-10-14 ENCODE 2 ENCFF452CEM 12108987 ENCODE Processing Pipeline f01c2ee595e5d0d93542bc0091f1b19a https://www.encodeproject.org/files/ENCFF649WPP/@@download/ENCFF649WPP.bigBed hg19 released ENCFF155AHC bigBed narrowPeak peaks ENCSR894CGX ChIP-seq EFO:0002067 K562 cell line Homo sapiens SUPT5H-human ENCAB349SAR DNA False 2016-10-14 ENCODE 1, 2 ENCFF548OKF 11759139 ENCODE Processing Pipeline 08d225222390b9b99895aa18fd0ad9c9 https://www.encodeproject.org/files/ENCFF155AHC/@@download/ENCFF155AHC.bigBed hg19 released ENCFF795AYV bigBed narrowPeak optimal idr thresholded peaks ENCSR894CGX ChIP-seq EFO:0002067 K562 cell line Homo sapiens SUPT5H-human ENCAB349SAR DNA False 2016-10-14 ENCODE 1, 2 ENCFF484HCG 1109540 ENCODE Processing Pipeline 6e680ece8e571ac67e8788535c1058de https://www.encodeproject.org/files/ENCFF795AYV/@@download/ENCFF795AYV.bigBed hg19 released ENCFF484HCG bed narrowPeak optimal idr thresholded peaks ENCSR894CGX ChIP-seq EFO:0002067 K562 cell line Homo sapiens SUPT5H-human ENCAB349SAR DNA False 2016-10-14 ENCODE 1, 2 ENCFF001TDO, ENCFF452CEM, ENCFF548OKF, ENCFF902RHR 545686 ENCODE Processing Pipeline edb704f30f5be1dd1284828f92f6a8ed https://www.encodeproject.org/files/ENCFF484HCG/@@download/ENCFF484HCG.bed.gz hg19 released ENCFF625EVD bam unfiltered alignments ENCSR894CGX ChIP-seq EFO:0002067 K562 cell line Homo sapiens SUPT5H-human ENCAB349SAR DNA False 2016-10-14 ENCODE 1 100 ENCFF086VLI, ENCFF397FZD, ENCFF643CGH 4965052350 ENCODE Processing Pipeline c8539f4f6967a9d68f43dea7cc9966c8 https://www.encodeproject.org/files/ENCFF625EVD/@@download/ENCFF625EVD.bam GRCh38 released ENCFF256DMO bam unfiltered alignments ENCSR894CGX ChIP-seq EFO:0002067 K562 cell line Homo sapiens SUPT5H-human ENCAB349SAR DNA False 2016-10-14 ENCODE 2 100 ENCFF077SPQ, ENCFF383EJJ, ENCFF643CGH 5284747511 ENCODE Processing Pipeline 53f3edfe82fb02530a7923ade6562f64 https://www.encodeproject.org/files/ENCFF256DMO/@@download/ENCFF256DMO.bam GRCh38 released ENCFF079TBV bam alignments ENCSR894CGX ChIP-seq EFO:0002067 K562 cell line Homo sapiens SUPT5H-human ENCAB349SAR DNA False 2016-10-14 ENCODE 1 100 ENCFF086VLI, ENCFF397FZD, ENCFF643CGH 4320981477 ENCODE Processing Pipeline 7fb7d2db0d8c8414118057705d6a26b7 https://www.encodeproject.org/files/ENCFF079TBV/@@download/ENCFF079TBV.bam GRCh38 released ENCFF772XIR bam alignments ENCSR894CGX ChIP-seq EFO:0002067 K562 cell line Homo sapiens SUPT5H-human ENCAB349SAR DNA False 2016-10-14 ENCODE 2 100 ENCFF077SPQ, ENCFF383EJJ, ENCFF643CGH 4567137992 ENCODE Processing Pipeline e7cdead9c70c303cd6edc3fe107b7ea0 https://www.encodeproject.org/files/ENCFF772XIR/@@download/ENCFF772XIR.bam GRCh38 released ENCFF304OUU bigWig signal p-value ENCSR894CGX ChIP-seq EFO:0002067 K562 cell line Homo sapiens SUPT5H-human ENCAB349SAR DNA False 2016-10-14 ENCODE 1 ENCFF079TBV, ENCFF910IKB 1065664428 ENCODE Processing Pipeline 3eeff7653b0733f10af01e749d17d1b6 https://www.encodeproject.org/files/ENCFF304OUU/@@download/ENCFF304OUU.bigWig GRCh38 released ENCFF942HRD bigWig signal p-value ENCSR894CGX ChIP-seq EFO:0002067 K562 cell line Homo sapiens SUPT5H-human ENCAB349SAR DNA False 2016-10-14 ENCODE 2 ENCFF227IZS, ENCFF772XIR 1211970489 ENCODE Processing Pipeline 1b1a30cfd6cea72e1d1b82c49eb25992 https://www.encodeproject.org/files/ENCFF942HRD/@@download/ENCFF942HRD.bigWig GRCh38 released ENCFF535QQM bigWig signal p-value ENCSR894CGX ChIP-seq EFO:0002067 K562 cell line Homo sapiens SUPT5H-human ENCAB349SAR DNA False 2016-10-14 ENCODE 1, 2 ENCFF079TBV, ENCFF227IZS, ENCFF772XIR, ENCFF910IKB 1615415466 ENCODE Processing Pipeline aea43dbacff7fa83bee1d88f3ea8b80c https://www.encodeproject.org/files/ENCFF535QQM/@@download/ENCFF535QQM.bigWig GRCh38 released ENCFF930GBO bigWig fold change over control ENCSR894CGX ChIP-seq EFO:0002067 K562 cell line Homo sapiens SUPT5H-human ENCAB349SAR DNA False 2016-10-14 ENCODE 1 ENCFF079TBV, ENCFF910IKB 1139385191 ENCODE Processing Pipeline b5e9fd36f7316dc449a5f927b4bb819d https://www.encodeproject.org/files/ENCFF930GBO/@@download/ENCFF930GBO.bigWig GRCh38 released ENCFF394NZY bigWig fold change over control ENCSR894CGX ChIP-seq EFO:0002067 K562 cell line Homo sapiens SUPT5H-human ENCAB349SAR DNA False 2016-10-14 ENCODE 2 ENCFF227IZS, ENCFF772XIR 1133308493 ENCODE Processing Pipeline 040337f8934cf8179abb49d712eeea28 https://www.encodeproject.org/files/ENCFF394NZY/@@download/ENCFF394NZY.bigWig GRCh38 released ENCFF564JHK bigWig fold change over control ENCSR894CGX ChIP-seq EFO:0002067 K562 cell line Homo sapiens SUPT5H-human ENCAB349SAR DNA False 2016-10-14 ENCODE 1, 2 ENCFF079TBV, ENCFF227IZS, ENCFF772XIR, ENCFF910IKB 2087245860 ENCODE Processing Pipeline 8dc91874778dc26db51f030eb41a1b3e https://www.encodeproject.org/files/ENCFF564JHK/@@download/ENCFF564JHK.bigWig GRCh38 released ENCFF986PTF bed narrowPeak peaks ENCSR894CGX ChIP-seq EFO:0002067 K562 cell line Homo sapiens SUPT5H-human ENCAB349SAR DNA False 2016-10-14 ENCODE 1 ENCFF079TBV, ENCFF910IKB 7110923 ENCODE Processing Pipeline 6ae8ef77cf4ff11989591a6ae4bc6d3e https://www.encodeproject.org/files/ENCFF986PTF/@@download/ENCFF986PTF.bed.gz GRCh38 released ENCFF680XEG bed narrowPeak peaks ENCSR894CGX ChIP-seq EFO:0002067 K562 cell line Homo sapiens SUPT5H-human ENCAB349SAR DNA False 2016-10-14 ENCODE 2 ENCFF227IZS, ENCFF772XIR 7119635 ENCODE Processing Pipeline afe45810bce07a58c7319d9e41dfc2d1 https://www.encodeproject.org/files/ENCFF680XEG/@@download/ENCFF680XEG.bed.gz GRCh38 released ENCFF710LBM bed narrowPeak peaks ENCSR894CGX ChIP-seq EFO:0002067 K562 cell line Homo sapiens SUPT5H-human ENCAB349SAR DNA False 2016-10-14 ENCODE 1, 2 ENCFF079TBV, ENCFF227IZS, ENCFF772XIR, ENCFF910IKB 7188257 ENCODE Processing Pipeline 8b5cc6a9a4c3247b7e707846b9ce23e0 https://www.encodeproject.org/files/ENCFF710LBM/@@download/ENCFF710LBM.bed.gz GRCh38 released ENCFF897QFQ bigBed narrowPeak peaks ENCSR894CGX ChIP-seq EFO:0002067 K562 cell line Homo sapiens SUPT5H-human ENCAB349SAR DNA False 2016-10-14 ENCODE 1 ENCFF986PTF 12162775 ENCODE Processing Pipeline 06c8e69aee47555ac2a64ccebcf34751 https://www.encodeproject.org/files/ENCFF897QFQ/@@download/ENCFF897QFQ.bigBed GRCh38 released ENCFF237EIS bigBed narrowPeak peaks ENCSR894CGX ChIP-seq EFO:0002067 K562 cell line Homo sapiens SUPT5H-human ENCAB349SAR DNA False 2016-10-14 ENCODE 2 ENCFF680XEG 12024067 ENCODE Processing Pipeline 2c85d9ddb6f5368ae1314e14d1f6e995 https://www.encodeproject.org/files/ENCFF237EIS/@@download/ENCFF237EIS.bigBed GRCh38 released ENCFF846ZDV bigBed narrowPeak peaks ENCSR894CGX ChIP-seq EFO:0002067 K562 cell line Homo sapiens SUPT5H-human ENCAB349SAR DNA False 2016-10-14 ENCODE 1, 2 ENCFF710LBM 11767010 ENCODE Processing Pipeline 933e1e9240cfafece56721b1a96d0294 https://www.encodeproject.org/files/ENCFF846ZDV/@@download/ENCFF846ZDV.bigBed GRCh38 released ENCFF721DPQ bed narrowPeak optimal idr thresholded peaks ENCSR894CGX ChIP-seq EFO:0002067 K562 cell line Homo sapiens SUPT5H-human ENCAB349SAR DNA False 2016-10-14 ENCODE 1, 2 ENCFF419RSJ, ENCFF680XEG, ENCFF710LBM, ENCFF986PTF 544728 ENCODE Processing Pipeline e42a19231a68bed191cd2e322f964da2 https://www.encodeproject.org/files/ENCFF721DPQ/@@download/ENCFF721DPQ.bed.gz GRCh38 released ENCFF781NME bigBed narrowPeak optimal idr thresholded peaks ENCSR894CGX ChIP-seq EFO:0002067 K562 cell line Homo sapiens SUPT5H-human ENCAB349SAR DNA False 2016-10-14 ENCODE 1, 2 ENCFF721DPQ 1111645 ENCODE Processing Pipeline 30fa57f0881e8ab10a135a78ab657f6b https://www.encodeproject.org/files/ENCFF781NME/@@download/ENCFF781NME.bigBed GRCh38 released ENCFF000QCT bam alignments ENCSR000BQY ChIP-seq EFO:0002067 K562 cell line Homo sapiens PML-human ENCAB000AKA DNA see document see document False 2012-02-29 ENCODE 1 ENCFF000QDH 1160484172 Richard Myers, HAIB b1b4dcb51da6fb67a786ddd60fd651af https://www.encodeproject.org/files/ENCFF000QCT/@@download/ENCFF000QCT.bam hg19 archived inconsistent platforms, low read depth, low read length biological replicates with identical biosample ENCFF000QCU bigBed broadPeak peaks ENCSR000BQY ChIP-seq EFO:0002067 K562 cell line Homo sapiens PML-human ENCAB000AKA DNA see document see document False 2012-02-29 ENCODE 1 1 ENCFF001UKP 348395 Richard Myers, HAIB 2b59fc2ff6d1be97356557186c186d81 https://www.encodeproject.org/files/ENCFF000QCU/@@download/ENCFF000QCU.bigBed hg19 archived inconsistent platforms, low read depth, low read length biological replicates with identical biosample ENCFF000QCV bigBed broadPeak peaks ENCSR000BQY ChIP-seq EFO:0002067 K562 cell line Homo sapiens PML-human ENCAB000AKA DNA see document see document False 2012-02-29 ENCODE 2 1 ENCFF001UKQ 520351 Richard Myers, HAIB 1665d624b7e1d5177e6310cfb9feb5f0 https://www.encodeproject.org/files/ENCFF000QCV/@@download/ENCFF000QCV.bigBed hg19 archived inconsistent platforms, low read depth, low read length biological replicates with identical biosample ENCFF000QCY bigWig raw signal ENCSR000BQY ChIP-seq EFO:0002067 K562 cell line Homo sapiens PML-human ENCAB000AKA DNA see document see document False 2012-02-29 ENCODE 1 1 15292931 Richard Myers, HAIB 330d4387d621d861e56923176e27ef72 https://www.encodeproject.org/files/ENCFF000QCY/@@download/ENCFF000QCY.bigWig hg19 archived inconsistent platforms, low read depth, low read length biological replicates with identical biosample, missing derived_from ENCFF000QCZ bam alignments ENCSR000BQY ChIP-seq EFO:0002067 K562 cell line Homo sapiens PML-human ENCAB000AKA DNA see document see document False 2012-02-29 ENCODE 2 ENCFF000QDJ 1510774310 Richard Myers, HAIB eda2ab07e66552a27d1b05ffe90fafd5 https://www.encodeproject.org/files/ENCFF000QCZ/@@download/ENCFF000QCZ.bam hg19 archived inconsistent platforms, low read depth, low read length biological replicates with identical biosample ENCFF000QDA bigWig raw signal ENCSR000BQY ChIP-seq EFO:0002067 K562 cell line Homo sapiens PML-human ENCAB000AKA DNA see document see document False 2012-02-29 ENCODE 2 1 21203744 Richard Myers, HAIB 58d94ccc35edefaa79eb08d3df13e6ef https://www.encodeproject.org/files/ENCFF000QDA/@@download/ENCFF000QDA.bigWig hg19 archived inconsistent platforms, low read depth, low read length biological replicates with identical biosample, missing derived_from ENCFF000QDH fastq reads ENCSR000BQY ChIP-seq EFO:0002067 K562 cell line Homo sapiens PML-human ENCAB000AKA DNA see document see document False 2012-02-29 ENCODE 1 1 36 single-ended 1119231529 Richard Myers, HAIB 5d09c14c17a2415631baae8e382669b0 https://www.encodeproject.org/files/ENCFF000QDH/@@download/ENCFF000QDH.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000QFG/ released inconsistent platforms, low read depth, low read length biological replicates with identical biosample ENCFF000QDJ fastq reads ENCSR000BQY ChIP-seq EFO:0002067 K562 cell line Homo sapiens PML-human ENCAB000AKA DNA see document see document False 2012-02-29 ENCODE 2 1 36 single-ended 1476342849 Richard Myers, HAIB 05418c532444c1a97167b1c9c4fcea3e https://www.encodeproject.org/files/ENCFF000QDJ/@@download/ENCFF000QDJ.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000QFG/ released inconsistent platforms, low read depth, low read length biological replicates with identical biosample ENCFF001UKP bed broadPeak peaks ENCSR000BQY ChIP-seq EFO:0002067 K562 cell line Homo sapiens PML-human ENCAB000AKA DNA see document see document False 2012-02-29 ENCODE 1 1 187649 Richard Myers, HAIB 75044ed4b50141c9407944a29fc6f154 https://www.encodeproject.org/files/ENCFF001UKP/@@download/ENCFF001UKP.bed.gz hg19 archived inconsistent platforms, low read depth, low read length biological replicates with identical biosample, missing derived_from ENCFF001UKQ bed broadPeak peaks ENCSR000BQY ChIP-seq EFO:0002067 K562 cell line Homo sapiens PML-human ENCAB000AKA DNA see document see document False 2012-02-29 ENCODE 2 1 329971 Richard Myers, HAIB 99c5e56d15b4d804a40eb6f17617ab57 https://www.encodeproject.org/files/ENCFF001UKQ/@@download/ENCFF001UKQ.bed.gz hg19 archived inconsistent platforms, low read depth, low read length biological replicates with identical biosample, missing derived_from ENCFF002CMG bed narrowPeak optimal idr thresholded peaks ENCSR000BQY ChIP-seq EFO:0002067 K562 cell line Homo sapiens PML-human ENCAB000AKA DNA see document see document False 2012-02-29 ENCODE 315726 ENCODE Consortium Analysis Working Group 1d1567ffccbd267df03c88c0b848fb7a https://www.encodeproject.org/files/ENCFF002CMG/@@download/ENCFF002CMG.bed.gz hg19 archived inconsistent platforms, low read depth, low read length biological replicates with identical biosample, missing derived_from ENCFF217NGN bigBed narrowPeak optimal idr thresholded peaks ENCSR000BQY ChIP-seq EFO:0002067 K562 cell line Homo sapiens PML-human ENCAB000AKA DNA see document see document False 2012-02-29 ENCODE ENCFF002CMG 690667 ENCODE Consortium a7d8aedb7fd36829c76975c71e41cc80 https://www.encodeproject.org/files/ENCFF217NGN/@@download/ENCFF217NGN.bigBed hg19 archived inconsistent platforms, low read depth, low read length biological replicates with identical biosample ENCFF271YAJ bam unfiltered alignments ENCSR000BQY ChIP-seq EFO:0002067 K562 cell line Homo sapiens PML-human ENCAB000AKA DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000QDH, ENCFF643CGH 1266209804 ENCODE Processing Pipeline 4a7787c521913708a048d282026911f9 https://www.encodeproject.org/files/ENCFF271YAJ/@@download/ENCFF271YAJ.bam GRCh38 released inconsistent platforms, low read depth, low read length biological replicates with identical biosample ENCFF491DUD bam alignments ENCSR000BQY ChIP-seq EFO:0002067 K562 cell line Homo sapiens PML-human ENCAB000AKA DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000QDH, ENCFF643CGH 838143169 ENCODE Processing Pipeline 68835c98d12bf80ca87aceae4ea715d6 https://www.encodeproject.org/files/ENCFF491DUD/@@download/ENCFF491DUD.bam GRCh38 released inconsistent platforms, low read depth, low read length biological replicates with identical biosample ENCFF079DUY bam unfiltered alignments ENCSR000BQY ChIP-seq EFO:0002067 K562 cell line Homo sapiens PML-human ENCAB000AKA DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000QDJ, ENCFF643CGH 1596593688 ENCODE Processing Pipeline 4bf78d37efc002f6f8b5cd7e41551fbb https://www.encodeproject.org/files/ENCFF079DUY/@@download/ENCFF079DUY.bam GRCh38 released inconsistent platforms, low read depth, low read length biological replicates with identical biosample ENCFF112WHF bam alignments ENCSR000BQY ChIP-seq EFO:0002067 K562 cell line Homo sapiens PML-human ENCAB000AKA DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000QDJ, ENCFF643CGH 834158636 ENCODE Processing Pipeline 737a77a7329a778a1db4508694816d23 https://www.encodeproject.org/files/ENCFF112WHF/@@download/ENCFF112WHF.bam GRCh38 released inconsistent platforms, low read depth, low read length biological replicates with identical biosample ENCFF922XZM bam alignments ENCSR000BQY ChIP-seq EFO:0002067 K562 cell line Homo sapiens PML-human ENCAB000AKA DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000QDH, ENCFF807MUK 838568154 ENCODE Processing Pipeline 83f43f6128f5f6870423375e7c88aa36 https://www.encodeproject.org/files/ENCFF922XZM/@@download/ENCFF922XZM.bam hg19 released inconsistent platforms, low read depth, low read length biological replicates with identical biosample ENCFF667QID bam unfiltered alignments ENCSR000BQY ChIP-seq EFO:0002067 K562 cell line Homo sapiens PML-human ENCAB000AKA DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000QDH, ENCFF807MUK 1263717040 ENCODE Processing Pipeline 2f5af03dcef1244a000784a2e77d0bbe https://www.encodeproject.org/files/ENCFF667QID/@@download/ENCFF667QID.bam hg19 released inconsistent platforms, low read depth, low read length biological replicates with identical biosample ENCFF468QVC bam unfiltered alignments ENCSR000BQY ChIP-seq EFO:0002067 K562 cell line Homo sapiens PML-human ENCAB000AKA DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000QDJ, ENCFF807MUK 1593465870 ENCODE Processing Pipeline 761ca028a3ebb1362423ca09c82bce94 https://www.encodeproject.org/files/ENCFF468QVC/@@download/ENCFF468QVC.bam hg19 released inconsistent platforms, low read depth, low read length biological replicates with identical biosample ENCFF183MYT bam alignments ENCSR000BQY ChIP-seq EFO:0002067 K562 cell line Homo sapiens PML-human ENCAB000AKA DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000QDJ, ENCFF807MUK 834574217 ENCODE Processing Pipeline 96ce150872f7d4e1af336fa348ef2772 https://www.encodeproject.org/files/ENCFF183MYT/@@download/ENCFF183MYT.bam hg19 released inconsistent platforms, low read depth, low read length biological replicates with identical biosample ENCFF780FJX bigWig signal p-value ENCSR000BQY ChIP-seq EFO:0002067 K562 cell line Homo sapiens PML-human ENCAB000AKA DNA see document see document False 2012-02-29 ENCODE 1 ENCFF491DUD, ENCFF836OEO 654761975 ENCODE Processing Pipeline 060cca211f4d1820a427ce8678c946fc https://www.encodeproject.org/files/ENCFF780FJX/@@download/ENCFF780FJX.bigWig GRCh38 released inconsistent platforms, low read depth, low read length biological replicates with identical biosample ENCFF526JYS bigWig signal p-value ENCSR000BQY ChIP-seq EFO:0002067 K562 cell line Homo sapiens PML-human ENCAB000AKA DNA see document see document False 2012-02-29 ENCODE 2 ENCFF112WHF, ENCFF836OEO 613960516 ENCODE Processing Pipeline fa1477a07ff07818fcb9e01f69f973b6 https://www.encodeproject.org/files/ENCFF526JYS/@@download/ENCFF526JYS.bigWig GRCh38 released inconsistent platforms, low read depth, low read length biological replicates with identical biosample ENCFF813JIT bigWig signal p-value ENCSR000BQY ChIP-seq EFO:0002067 K562 cell line Homo sapiens PML-human ENCAB000AKA DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF112WHF, ENCFF491DUD, ENCFF836OEO 827809912 ENCODE Processing Pipeline 72312e1c14c95522901683af83d57b7e https://www.encodeproject.org/files/ENCFF813JIT/@@download/ENCFF813JIT.bigWig GRCh38 released inconsistent platforms, low read depth, low read length biological replicates with identical biosample ENCFF717BCO bigWig fold change over control ENCSR000BQY ChIP-seq EFO:0002067 K562 cell line Homo sapiens PML-human ENCAB000AKA DNA see document see document False 2012-02-29 ENCODE 1 ENCFF491DUD, ENCFF836OEO 519842501 ENCODE Processing Pipeline 33007d49ba914e0222553e95b23a6d20 https://www.encodeproject.org/files/ENCFF717BCO/@@download/ENCFF717BCO.bigWig GRCh38 released inconsistent platforms, low read depth, low read length biological replicates with identical biosample ENCFF239VGO bigWig fold change over control ENCSR000BQY ChIP-seq EFO:0002067 K562 cell line Homo sapiens PML-human ENCAB000AKA DNA see document see document False 2012-02-29 ENCODE 2 ENCFF112WHF, ENCFF836OEO 513198206 ENCODE Processing Pipeline 177f5052766cd0c83df6c027c8684029 https://www.encodeproject.org/files/ENCFF239VGO/@@download/ENCFF239VGO.bigWig GRCh38 released inconsistent platforms, low read depth, low read length biological replicates with identical biosample ENCFF706GUM bed narrowPeak peaks ENCSR000BQY ChIP-seq EFO:0002067 K562 cell line Homo sapiens PML-human ENCAB000AKA DNA see document see document False 2012-02-29 ENCODE 1 ENCFF491DUD, ENCFF836OEO 6268388 ENCODE Processing Pipeline 539ce4eb7c3b405d0b061c71a74b8bcb https://www.encodeproject.org/files/ENCFF706GUM/@@download/ENCFF706GUM.bed.gz GRCh38 released inconsistent platforms, low read depth, low read length biological replicates with identical biosample ENCFF282KQX bed narrowPeak peaks ENCSR000BQY ChIP-seq EFO:0002067 K562 cell line Homo sapiens PML-human ENCAB000AKA DNA see document see document False 2012-02-29 ENCODE 2 ENCFF112WHF, ENCFF836OEO 6526092 ENCODE Processing Pipeline 718f440292da58cd51b99a8121b7bf3d https://www.encodeproject.org/files/ENCFF282KQX/@@download/ENCFF282KQX.bed.gz GRCh38 released inconsistent platforms, low read depth, low read length biological replicates with identical biosample ENCFF668SKC bigWig fold change over control ENCSR000BQY ChIP-seq EFO:0002067 K562 cell line Homo sapiens PML-human ENCAB000AKA DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF112WHF, ENCFF491DUD, ENCFF836OEO 807417593 ENCODE Processing Pipeline 8b1e576e846e06f35350cf299c426b0d https://www.encodeproject.org/files/ENCFF668SKC/@@download/ENCFF668SKC.bigWig GRCh38 released inconsistent platforms, low read depth, low read length biological replicates with identical biosample ENCFF762ZDW bigBed narrowPeak peaks ENCSR000BQY ChIP-seq EFO:0002067 K562 cell line Homo sapiens PML-human ENCAB000AKA DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF970LID 12789980 ENCODE Processing Pipeline cb289db8df912544b9805fcf8af5c2e1 https://www.encodeproject.org/files/ENCFF762ZDW/@@download/ENCFF762ZDW.bigBed GRCh38 released inconsistent platforms, low read depth, low read length biological replicates with identical biosample ENCFF825CZN bigBed narrowPeak peaks ENCSR000BQY ChIP-seq EFO:0002067 K562 cell line Homo sapiens PML-human ENCAB000AKA DNA see document see document False 2012-02-29 ENCODE 1 ENCFF706GUM 12996980 ENCODE Processing Pipeline 9511957bdcb8dffa10c2ce9fb5d5abf5 https://www.encodeproject.org/files/ENCFF825CZN/@@download/ENCFF825CZN.bigBed GRCh38 released inconsistent platforms, low read depth, low read length biological replicates with identical biosample ENCFF613YPH bed narrowPeak conservative idr thresholded peaks ENCSR000BQY ChIP-seq EFO:0002067 K562 cell line Homo sapiens PML-human ENCAB000AKA DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF282KQX, ENCFF419RSJ, ENCFF706GUM, ENCFF970LID 301783 ENCODE Processing Pipeline c3ee9d8cb0d6c85dbde80b35e9a28ead https://www.encodeproject.org/files/ENCFF613YPH/@@download/ENCFF613YPH.bed.gz GRCh38 released inconsistent platforms, low read depth, low read length biological replicates with identical biosample ENCFF706UMH bigBed narrowPeak conservative idr thresholded peaks ENCSR000BQY ChIP-seq EFO:0002067 K562 cell line Homo sapiens PML-human ENCAB000AKA DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF613YPH 670552 ENCODE Processing Pipeline 05277c09a50dd2d9b2ff30ffe5773525 https://www.encodeproject.org/files/ENCFF706UMH/@@download/ENCFF706UMH.bigBed GRCh38 released inconsistent platforms, low read depth, low read length biological replicates with identical biosample ENCFF800QDU bed narrowPeak optimal idr thresholded peaks ENCSR000BQY ChIP-seq EFO:0002067 K562 cell line Homo sapiens PML-human ENCAB000AKA DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF282KQX, ENCFF419RSJ, ENCFF706GUM, ENCFF970LID 365755 ENCODE Processing Pipeline 6eec23a48cdde52ad1922299a27a72ad https://www.encodeproject.org/files/ENCFF800QDU/@@download/ENCFF800QDU.bed.gz GRCh38 released inconsistent platforms, low read depth, low read length biological replicates with identical biosample ENCFF079KZJ bigBed narrowPeak optimal idr thresholded peaks ENCSR000BQY ChIP-seq EFO:0002067 K562 cell line Homo sapiens PML-human ENCAB000AKA DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF800QDU 765834 ENCODE Processing Pipeline bcca0bec94a80d1a02f66c4160da7787 https://www.encodeproject.org/files/ENCFF079KZJ/@@download/ENCFF079KZJ.bigBed GRCh38 released inconsistent platforms, low read depth, low read length biological replicates with identical biosample ENCFF970LID bed narrowPeak peaks ENCSR000BQY ChIP-seq EFO:0002067 K562 cell line Homo sapiens PML-human ENCAB000AKA DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF112WHF, ENCFF491DUD, ENCFF836OEO 6973318 ENCODE Processing Pipeline 5699a10f512ad737a3557ab65c6d76d4 https://www.encodeproject.org/files/ENCFF970LID/@@download/ENCFF970LID.bed.gz GRCh38 released inconsistent platforms, low read depth, low read length biological replicates with identical biosample ENCFF379OZC bigBed narrowPeak peaks ENCSR000BQY ChIP-seq EFO:0002067 K562 cell line Homo sapiens PML-human ENCAB000AKA DNA see document see document False 2012-02-29 ENCODE 2 ENCFF282KQX 12792240 ENCODE Processing Pipeline beeeacf12cc13a54a548b7ef4bd418d6 https://www.encodeproject.org/files/ENCFF379OZC/@@download/ENCFF379OZC.bigBed GRCh38 released inconsistent platforms, low read depth, low read length biological replicates with identical biosample ENCFF412XML bigWig fold change over control ENCSR000BQY ChIP-seq EFO:0002067 K562 cell line Homo sapiens PML-human ENCAB000AKA DNA see document see document False 2012-02-29 ENCODE 2 ENCFF183MYT, ENCFF522HDC 498563391 ENCODE Processing Pipeline 8c2d70a2279067e18d55c1f88eb827d2 https://www.encodeproject.org/files/ENCFF412XML/@@download/ENCFF412XML.bigWig hg19 released inconsistent platforms, low read depth, low read length biological replicates with identical biosample ENCFF953HED bigBed narrowPeak peaks ENCSR000BQY ChIP-seq EFO:0002067 K562 cell line Homo sapiens PML-human ENCAB000AKA DNA see document see document False 2012-02-29 ENCODE 2 ENCFF475WRI 12774765 ENCODE Processing Pipeline e94528f0f5e323f089ccb5c2dc78f02f https://www.encodeproject.org/files/ENCFF953HED/@@download/ENCFF953HED.bigBed hg19 released inconsistent platforms, low read depth, low read length biological replicates with identical biosample ENCFF123EYE bigBed narrowPeak peaks ENCSR000BQY ChIP-seq EFO:0002067 K562 cell line Homo sapiens PML-human ENCAB000AKA DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF647VTS 12774493 ENCODE Processing Pipeline 64898d8b404a67230f01dc72a8ba160a https://www.encodeproject.org/files/ENCFF123EYE/@@download/ENCFF123EYE.bigBed hg19 released inconsistent platforms, low read depth, low read length biological replicates with identical biosample ENCFF108AJN bigBed narrowPeak optimal idr thresholded peaks ENCSR000BQY ChIP-seq EFO:0002067 K562 cell line Homo sapiens PML-human ENCAB000AKA DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF881QBT 762809 ENCODE Processing Pipeline ba63a57aaf00b99ed6ccaf425fa0bab2 https://www.encodeproject.org/files/ENCFF108AJN/@@download/ENCFF108AJN.bigBed hg19 released inconsistent platforms, low read depth, low read length biological replicates with identical biosample ENCFF868YJU bigWig signal p-value ENCSR000BQY ChIP-seq EFO:0002067 K562 cell line Homo sapiens PML-human ENCAB000AKA DNA see document see document False 2012-02-29 ENCODE 1 ENCFF522HDC, ENCFF922XZM 550474105 ENCODE Processing Pipeline 7b9ff8971886129436f135b3640c5d68 https://www.encodeproject.org/files/ENCFF868YJU/@@download/ENCFF868YJU.bigWig hg19 released inconsistent platforms, low read depth, low read length biological replicates with identical biosample ENCFF475WRI bed narrowPeak peaks ENCSR000BQY ChIP-seq EFO:0002067 K562 cell line Homo sapiens PML-human ENCAB000AKA DNA see document see document False 2012-02-29 ENCODE 2 ENCFF183MYT, ENCFF522HDC 6517388 ENCODE Processing Pipeline c4e7999b743103ac6a463192629ddcf9 https://www.encodeproject.org/files/ENCFF475WRI/@@download/ENCFF475WRI.bed.gz hg19 released inconsistent platforms, low read depth, low read length biological replicates with identical biosample ENCFF123RCO bigWig signal p-value ENCSR000BQY ChIP-seq EFO:0002067 K562 cell line Homo sapiens PML-human ENCAB000AKA DNA see document see document False 2012-02-29 ENCODE 2 ENCFF183MYT, ENCFF522HDC 564222684 ENCODE Processing Pipeline d63f9dc8b5232fe1e416b525da1855df https://www.encodeproject.org/files/ENCFF123RCO/@@download/ENCFF123RCO.bigWig hg19 released inconsistent platforms, low read depth, low read length biological replicates with identical biosample ENCFF226GBL bigWig signal p-value ENCSR000BQY ChIP-seq EFO:0002067 K562 cell line Homo sapiens PML-human ENCAB000AKA DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF183MYT, ENCFF522HDC, ENCFF922XZM 861767526 ENCODE Processing Pipeline d5aff30f217ecfeeedc54d7767aeb41b https://www.encodeproject.org/files/ENCFF226GBL/@@download/ENCFF226GBL.bigWig hg19 released inconsistent platforms, low read depth, low read length biological replicates with identical biosample ENCFF070CZW bed narrowPeak conservative idr thresholded peaks ENCSR000BQY ChIP-seq EFO:0002067 K562 cell line Homo sapiens PML-human ENCAB000AKA DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF001TDO, ENCFF357MIU, ENCFF475WRI, ENCFF647VTS 302845 ENCODE Processing Pipeline effd533a97c7beb2db00b6405deeded7 https://www.encodeproject.org/files/ENCFF070CZW/@@download/ENCFF070CZW.bed.gz hg19 released inconsistent platforms, low read depth, low read length biological replicates with identical biosample ENCFF232ALQ bigBed narrowPeak conservative idr thresholded peaks ENCSR000BQY ChIP-seq EFO:0002067 K562 cell line Homo sapiens PML-human ENCAB000AKA DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF070CZW 669856 ENCODE Processing Pipeline 6a62f8c7d71bdad2fef831f8707eb784 https://www.encodeproject.org/files/ENCFF232ALQ/@@download/ENCFF232ALQ.bigBed hg19 released inconsistent platforms, low read depth, low read length biological replicates with identical biosample ENCFF157IUB bigWig fold change over control ENCSR000BQY ChIP-seq EFO:0002067 K562 cell line Homo sapiens PML-human ENCAB000AKA DNA see document see document False 2012-02-29 ENCODE 1 ENCFF522HDC, ENCFF922XZM 520115567 ENCODE Processing Pipeline d71185311ecf9c8d6b10e51a9b3410e4 https://www.encodeproject.org/files/ENCFF157IUB/@@download/ENCFF157IUB.bigWig hg19 released inconsistent platforms, low read depth, low read length biological replicates with identical biosample ENCFF746UXC bigWig fold change over control ENCSR000BQY ChIP-seq EFO:0002067 K562 cell line Homo sapiens PML-human ENCAB000AKA DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF183MYT, ENCFF522HDC, ENCFF922XZM 830890607 ENCODE Processing Pipeline 92b37369ce99c840655e8f8976e1799d https://www.encodeproject.org/files/ENCFF746UXC/@@download/ENCFF746UXC.bigWig hg19 released inconsistent platforms, low read depth, low read length biological replicates with identical biosample ENCFF647VTS bed narrowPeak peaks ENCSR000BQY ChIP-seq EFO:0002067 K562 cell line Homo sapiens PML-human ENCAB000AKA DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF183MYT, ENCFF522HDC, ENCFF922XZM 6965069 ENCODE Processing Pipeline dd858bedaafc16979abfd393ada9814b https://www.encodeproject.org/files/ENCFF647VTS/@@download/ENCFF647VTS.bed.gz hg19 released inconsistent platforms, low read depth, low read length biological replicates with identical biosample ENCFF881QBT bed narrowPeak optimal idr thresholded peaks ENCSR000BQY ChIP-seq EFO:0002067 K562 cell line Homo sapiens PML-human ENCAB000AKA DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF001TDO, ENCFF357MIU, ENCFF475WRI, ENCFF647VTS 363996 ENCODE Processing Pipeline 8a230e2d708194877fa300a482c1d92a https://www.encodeproject.org/files/ENCFF881QBT/@@download/ENCFF881QBT.bed.gz hg19 released inconsistent platforms, low read depth, low read length biological replicates with identical biosample ENCFF357MIU bed narrowPeak peaks ENCSR000BQY ChIP-seq EFO:0002067 K562 cell line Homo sapiens PML-human ENCAB000AKA DNA see document see document False 2012-02-29 ENCODE 1 ENCFF522HDC, ENCFF922XZM 6322452 ENCODE Processing Pipeline 6bd5eb15d02d727dec9f873ffc478a67 https://www.encodeproject.org/files/ENCFF357MIU/@@download/ENCFF357MIU.bed.gz hg19 released inconsistent platforms, low read depth, low read length biological replicates with identical biosample ENCFF023RQV bigBed narrowPeak peaks ENCSR000BQY ChIP-seq EFO:0002067 K562 cell line Homo sapiens PML-human ENCAB000AKA DNA see document see document False 2012-02-29 ENCODE 1 ENCFF357MIU 12987320 ENCODE Processing Pipeline f54fbbda281a65b0858bf0b9376b48e9 https://www.encodeproject.org/files/ENCFF023RQV/@@download/ENCFF023RQV.bigBed hg19 released inconsistent platforms, low read depth, low read length biological replicates with identical biosample ENCFF000YPO fastq reads ENCSR000EHP ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 2 1 34 single-ended 766379773 Michael Snyder, Stanford f430034cb369e3faf8ed7309080d275a https://www.encodeproject.org/files/ENCFF000YPO/@@download/ENCFF000YPO.fastq.gz Illumina Genome Analyzer /files/ENCFF000YPM/ released mixed read lengths, low read depth biological replicates with identical biosample insufficient read length, control insufficient read depth, insufficient read depth ENCFF000YPQ fastq reads ENCSR000EHP ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 1 1 27 single-ended 436092289 Michael Snyder, Stanford acaee6463c6f703cc569f192301f160a https://www.encodeproject.org/files/ENCFF000YPQ/@@download/ENCFF000YPQ.fastq.gz Illumina Genome Analyzer /files/ENCFF000YPM/ released mixed read lengths, low read depth, inconsistent control read length biological replicates with identical biosample insufficient read length, control insufficient read depth, insufficient read depth ENCFF000YWH bam alignments ENCSR000EHP ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 1 ENCFF000YPQ 586627307 Michael Snyder, Stanford 0f947c178fa421a5879d4ecdad437e46 https://www.encodeproject.org/files/ENCFF000YWH/@@download/ENCFF000YWH.bam hg19 archived mixed read lengths, low read depth biological replicates with identical biosample insufficient read length, control insufficient read depth, insufficient read depth ENCFF000YWI bigBed narrowPeak peaks ENCSR000EHP ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE ENCFF001VOF 643720 Michael Snyder, Stanford 188c693901c622c90872c6402da1ae9a https://www.encodeproject.org/files/ENCFF000YWI/@@download/ENCFF000YWI.bigBed hg19 archived mixed read lengths, low read depth biological replicates with identical biosample insufficient read length, control insufficient read depth, insufficient read depth ENCFF000YWJ bigWig signal ENCSR000EHP ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 362848792 Michael Snyder, Stanford 8bb641fe367ca0f9275e56c0dce9dcf3 https://www.encodeproject.org/files/ENCFF000YWJ/@@download/ENCFF000YWJ.bigWig hg19 archived mixed read lengths, low read depth biological replicates with identical biosample, missing derived_from insufficient read length, control insufficient read depth, insufficient read depth ENCFF000YWK bam alignments ENCSR000EHP ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 2 ENCFF000YPO 961713794 Michael Snyder, Stanford 7296ceb733c635db9ff6bcd404b3b44a https://www.encodeproject.org/files/ENCFF000YWK/@@download/ENCFF000YWK.bam hg19 archived mixed read lengths, low read depth biological replicates with identical biosample insufficient read length, control insufficient read depth, insufficient read depth ENCFF001VOF bed narrowPeak peaks ENCSR000EHP ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 268652 Michael Snyder, Stanford 0e1e4bcfbc9143d6da9027890b928bf0 https://www.encodeproject.org/files/ENCFF001VOF/@@download/ENCFF001VOF.bed.gz hg19 archived mixed read lengths, low read depth biological replicates with identical biosample, missing derived_from insufficient read length, control insufficient read depth, insufficient read depth ENCFF002CXO bed narrowPeak optimal idr thresholded peaks ENCSR000EHP ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 369857 ENCODE Consortium Analysis Working Group eeb2549b268c9ec76e97ce900cdb85cc https://www.encodeproject.org/files/ENCFF002CXO/@@download/ENCFF002CXO.bed.gz hg19 archived mixed read lengths, low read depth biological replicates with identical biosample, missing derived_from insufficient read length, control insufficient read depth, insufficient read depth ENCFF766AXD bigBed narrowPeak optimal idr thresholded peaks ENCSR000EHP ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE ENCFF002CXO 1091924 ENCODE Consortium 3cb85ea8310802722dc8db2303d3a862 https://www.encodeproject.org/files/ENCFF766AXD/@@download/ENCFF766AXD.bigBed hg19 archived mixed read lengths, low read depth biological replicates with identical biosample insufficient read length, control insufficient read depth, insufficient read depth ENCFF548NQU bam alignments ENCSR000EHP ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 2 27 ENCFF000YPO, ENCFF643CGH 479531035 ENCODE Processing Pipeline 07ff5f6f65afbb793b91846125cda5e8 https://www.encodeproject.org/files/ENCFF548NQU/@@download/ENCFF548NQU.bam GRCh38 released mixed read lengths, low read depth biological replicates with identical biosample insufficient read length, control insufficient read depth, insufficient read depth ENCFF058BQT bigWig fold change over control ENCSR000EHP ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF548NQU, ENCFF914ABF, ENCFF942FFX 251675429 ENCODE Processing Pipeline 78716b7871d51452dc51c0c23a4fd5bb https://www.encodeproject.org/files/ENCFF058BQT/@@download/ENCFF058BQT.bigWig GRCh38 released mixed read lengths, low read depth biological replicates with identical biosample insufficient read length, control insufficient read depth, insufficient read depth ENCFF730DLS bed narrowPeak optimal idr thresholded peaks ENCSR000EHP ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF152QPA, ENCFF419RSJ, ENCFF549VGN, ENCFF562TUU 400191 ENCODE Processing Pipeline 6703f2ed1b6467c0fb8f7151d30b608b https://www.encodeproject.org/files/ENCFF730DLS/@@download/ENCFF730DLS.bed.gz GRCh38 released mixed read lengths, low read depth biological replicates with identical biosample insufficient read length, control insufficient read depth, insufficient read depth ENCFF914ABF bam alignments ENCSR000EHP ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 1 27 ENCFF000YPQ, ENCFF643CGH 270958076 ENCODE Processing Pipeline 863b197c419d60d8d92ca3bc359b10dd https://www.encodeproject.org/files/ENCFF914ABF/@@download/ENCFF914ABF.bam GRCh38 released mixed read lengths, low read depth biological replicates with identical biosample insufficient read length, control insufficient read depth, insufficient read depth ENCFF571PEE bigWig fold change over control ENCSR000EHP ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 2 ENCFF548NQU, ENCFF942FFX 173001911 ENCODE Processing Pipeline f83ba8a384c05a32beb13a81a769d0f3 https://www.encodeproject.org/files/ENCFF571PEE/@@download/ENCFF571PEE.bigWig GRCh38 released mixed read lengths, low read depth biological replicates with identical biosample insufficient read length, control insufficient read depth, insufficient read depth ENCFF130MGZ bam unfiltered alignments ENCSR000EHP ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 1 27 ENCFF000YPQ, ENCFF643CGH 588195189 ENCODE Processing Pipeline 59d59473c46b883e44b0f995719ea1bb https://www.encodeproject.org/files/ENCFF130MGZ/@@download/ENCFF130MGZ.bam GRCh38 released mixed read lengths, low read depth biological replicates with identical biosample insufficient read length, control insufficient read depth, insufficient read depth ENCFF123QRZ bam unfiltered alignments ENCSR000EHP ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 2 27 ENCFF000YPO, ENCFF643CGH 869248228 ENCODE Processing Pipeline 1856e679724ff992c5a227fd9bc32a10 https://www.encodeproject.org/files/ENCFF123QRZ/@@download/ENCFF123QRZ.bam GRCh38 released mixed read lengths, low read depth biological replicates with identical biosample insufficient read length, control insufficient read depth, insufficient read depth ENCFF883OGO bigWig signal p-value ENCSR000EHP ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 1 ENCFF914ABF, ENCFF942FFX 196449657 ENCODE Processing Pipeline 4507e93025d6eb97d15c655dced6dd81 https://www.encodeproject.org/files/ENCFF883OGO/@@download/ENCFF883OGO.bigWig GRCh38 released mixed read lengths, low read depth biological replicates with identical biosample insufficient read length, control insufficient read depth, insufficient read depth ENCFF793TOS bigWig signal p-value ENCSR000EHP ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 2 ENCFF548NQU, ENCFF942FFX 236764917 ENCODE Processing Pipeline e36600ea6a88caa652d771b33a00db29 https://www.encodeproject.org/files/ENCFF793TOS/@@download/ENCFF793TOS.bigWig GRCh38 released mixed read lengths, low read depth biological replicates with identical biosample insufficient read length, control insufficient read depth, insufficient read depth ENCFF152QPA bed narrowPeak peaks ENCSR000EHP ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 1 ENCFF914ABF, ENCFF942FFX 3684784 ENCODE Processing Pipeline 04275d19a6c70caac1ace9ee8a75288a https://www.encodeproject.org/files/ENCFF152QPA/@@download/ENCFF152QPA.bed.gz GRCh38 released mixed read lengths, low read depth biological replicates with identical biosample insufficient read length, control insufficient read depth, insufficient read depth ENCFF882UVM bigBed narrowPeak peaks ENCSR000EHP ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF562TUU 12295107 ENCODE Processing Pipeline 14690149f75c60867e01be8a1645a82a https://www.encodeproject.org/files/ENCFF882UVM/@@download/ENCFF882UVM.bigBed GRCh38 released mixed read lengths, low read depth biological replicates with identical biosample insufficient read length, control insufficient read depth, insufficient read depth ENCFF080DKS bigBed narrowPeak optimal idr thresholded peaks ENCSR000EHP ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF730DLS 997471 ENCODE Processing Pipeline 5bd57bc3b20f8f3c627b718f98f2a086 https://www.encodeproject.org/files/ENCFF080DKS/@@download/ENCFF080DKS.bigBed GRCh38 released mixed read lengths, low read depth biological replicates with identical biosample insufficient read length, control insufficient read depth, insufficient read depth ENCFF425QRS bigWig fold change over control ENCSR000EHP ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 1 ENCFF914ABF, ENCFF942FFX 106405013 ENCODE Processing Pipeline 2ed878a0574a432f9ab2ce48a32da741 https://www.encodeproject.org/files/ENCFF425QRS/@@download/ENCFF425QRS.bigWig GRCh38 released mixed read lengths, low read depth biological replicates with identical biosample insufficient read length, control insufficient read depth, insufficient read depth ENCFF017VKI bigWig signal p-value ENCSR000EHP ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF548NQU, ENCFF914ABF, ENCFF942FFX 245117195 ENCODE Processing Pipeline b481be4bf2341e85d65de1b379ee7fe0 https://www.encodeproject.org/files/ENCFF017VKI/@@download/ENCFF017VKI.bigWig GRCh38 released mixed read lengths, low read depth biological replicates with identical biosample insufficient read length, control insufficient read depth, insufficient read depth ENCFF562TUU bed narrowPeak peaks ENCSR000EHP ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF548NQU, ENCFF914ABF, ENCFF942FFX 5887178 ENCODE Processing Pipeline a42bf7d1dac8e7925d053e72ba627dd3 https://www.encodeproject.org/files/ENCFF562TUU/@@download/ENCFF562TUU.bed.gz GRCh38 released mixed read lengths, low read depth biological replicates with identical biosample insufficient read length, control insufficient read depth, insufficient read depth ENCFF856JTT bigBed narrowPeak peaks ENCSR000EHP ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 2 ENCFF549VGN 12218039 ENCODE Processing Pipeline 86278aea14b2e2d1891eae5b4676ebd9 https://www.encodeproject.org/files/ENCFF856JTT/@@download/ENCFF856JTT.bigBed GRCh38 released mixed read lengths, low read depth biological replicates with identical biosample insufficient read length, control insufficient read depth, insufficient read depth ENCFF365NCW bed narrowPeak conservative idr thresholded peaks ENCSR000EHP ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF152QPA, ENCFF419RSJ, ENCFF549VGN, ENCFF562TUU 350824 ENCODE Processing Pipeline da078730dc74993b85a4697d3365beaa https://www.encodeproject.org/files/ENCFF365NCW/@@download/ENCFF365NCW.bed.gz GRCh38 released mixed read lengths, low read depth biological replicates with identical biosample insufficient read length, control insufficient read depth, insufficient read depth ENCFF988PXD bigBed narrowPeak conservative idr thresholded peaks ENCSR000EHP ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF365NCW 909233 ENCODE Processing Pipeline f391e24ab63fd12f5f188437fcf07817 https://www.encodeproject.org/files/ENCFF988PXD/@@download/ENCFF988PXD.bigBed GRCh38 released mixed read lengths, low read depth biological replicates with identical biosample insufficient read length, control insufficient read depth, insufficient read depth ENCFF549VGN bed narrowPeak peaks ENCSR000EHP ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 2 ENCFF548NQU, ENCFF942FFX 5437878 ENCODE Processing Pipeline 3871b175f6f083ff4973d0cd0d3f5795 https://www.encodeproject.org/files/ENCFF549VGN/@@download/ENCFF549VGN.bed.gz GRCh38 released mixed read lengths, low read depth biological replicates with identical biosample insufficient read length, control insufficient read depth, insufficient read depth ENCFF891CRH bigBed narrowPeak peaks ENCSR000EHP ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 1 ENCFF152QPA 8904427 ENCODE Processing Pipeline db06756cfbfe47f2a22a42918e756c5d https://www.encodeproject.org/files/ENCFF891CRH/@@download/ENCFF891CRH.bigBed GRCh38 released mixed read lengths, low read depth biological replicates with identical biosample insufficient read length, control insufficient read depth, insufficient read depth ENCFF826FLP bigWig fold change over control ENCSR000EHP ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 1 ENCFF287WTN, ENCFF743JWE 106620707 ENCODE Processing Pipeline 060bf7760f185ea17b9c98da92b2d2c9 https://www.encodeproject.org/files/ENCFF826FLP/@@download/ENCFF826FLP.bigWig hg19 released mixed read lengths, low read depth biological replicates with identical biosample insufficient read length, control insufficient read depth, insufficient read depth ENCFF659SMB bigWig signal p-value ENCSR000EHP ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF287WTN, ENCFF583QFG, ENCFF743JWE 245421077 ENCODE Processing Pipeline 1630e25620c832cb2b6432dddf43da3a https://www.encodeproject.org/files/ENCFF659SMB/@@download/ENCFF659SMB.bigWig hg19 released mixed read lengths, low read depth biological replicates with identical biosample insufficient read length, control insufficient read depth, insufficient read depth ENCFF839EBS bigBed narrowPeak peaks ENCSR000EHP ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF188QEA 12291802 ENCODE Processing Pipeline 5426607fc3faf9317ffdb2dc0fa67576 https://www.encodeproject.org/files/ENCFF839EBS/@@download/ENCFF839EBS.bigBed hg19 released mixed read lengths, low read depth biological replicates with identical biosample insufficient read length, control insufficient read depth, insufficient read depth ENCFF303QSJ bigWig fold change over control ENCSR000EHP ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF287WTN, ENCFF583QFG, ENCFF743JWE 254059843 ENCODE Processing Pipeline e4f606ba170eebc511a8f927cd96ab49 https://www.encodeproject.org/files/ENCFF303QSJ/@@download/ENCFF303QSJ.bigWig hg19 released mixed read lengths, low read depth biological replicates with identical biosample insufficient read length, control insufficient read depth, insufficient read depth ENCFF050JYN bed narrowPeak peaks ENCSR000EHP ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 1 ENCFF287WTN, ENCFF743JWE 3663233 ENCODE Processing Pipeline 1017df22cef1ab3d6851b3a7962ed2fd https://www.encodeproject.org/files/ENCFF050JYN/@@download/ENCFF050JYN.bed.gz hg19 released mixed read lengths, low read depth biological replicates with identical biosample insufficient read length, control insufficient read depth, insufficient read depth ENCFF278XFP bed narrowPeak peaks ENCSR000EHP ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 2 ENCFF287WTN, ENCFF583QFG 5443236 ENCODE Processing Pipeline 5cc4ac63006cbb2586c6108c05a5b363 https://www.encodeproject.org/files/ENCFF278XFP/@@download/ENCFF278XFP.bed.gz hg19 released mixed read lengths, low read depth biological replicates with identical biosample insufficient read length, control insufficient read depth, insufficient read depth ENCFF481WUJ bigBed narrowPeak peaks ENCSR000EHP ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 2 ENCFF278XFP 12217873 ENCODE Processing Pipeline 830599ba6107b9c1a444d377fd65f7df https://www.encodeproject.org/files/ENCFF481WUJ/@@download/ENCFF481WUJ.bigBed hg19 released mixed read lengths, low read depth biological replicates with identical biosample insufficient read length, control insufficient read depth, insufficient read depth ENCFF275TFD bed narrowPeak conservative idr thresholded peaks ENCSR000EHP ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF001TDO, ENCFF050JYN, ENCFF188QEA, ENCFF278XFP 351743 ENCODE Processing Pipeline 8325055489c2c9a56dde3da122effc74 https://www.encodeproject.org/files/ENCFF275TFD/@@download/ENCFF275TFD.bed.gz hg19 released mixed read lengths, low read depth biological replicates with identical biosample insufficient read length, control insufficient read depth, insufficient read depth ENCFF082DRX bigBed narrowPeak conservative idr thresholded peaks ENCSR000EHP ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF275TFD 909259 ENCODE Processing Pipeline 6bbdd42c2c3c070c8d1f03cb17ba28f5 https://www.encodeproject.org/files/ENCFF082DRX/@@download/ENCFF082DRX.bigBed hg19 released mixed read lengths, low read depth biological replicates with identical biosample insufficient read length, control insufficient read depth, insufficient read depth ENCFF551QPJ bam unfiltered alignments ENCSR000EHP ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 1 27 ENCFF000YPQ, ENCFF807MUK 587127779 ENCODE Processing Pipeline ae7c4f1a0d735c6b8aea8656848d6c4e https://www.encodeproject.org/files/ENCFF551QPJ/@@download/ENCFF551QPJ.bam hg19 released mixed read lengths, low read depth biological replicates with identical biosample insufficient read length, control insufficient read depth, insufficient read depth ENCFF785APX bam unfiltered alignments ENCSR000EHP ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 2 27 ENCFF000YPO, ENCFF807MUK 868036589 ENCODE Processing Pipeline 4ab91c11164582b3b5af57a9caffa5af https://www.encodeproject.org/files/ENCFF785APX/@@download/ENCFF785APX.bam hg19 released mixed read lengths, low read depth biological replicates with identical biosample insufficient read length, control insufficient read depth, insufficient read depth ENCFF466OTZ bigWig fold change over control ENCSR000EHP ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 2 ENCFF287WTN, ENCFF583QFG 173852945 ENCODE Processing Pipeline 5ae8c534798b33b1a8c26b0432f9fa7d https://www.encodeproject.org/files/ENCFF466OTZ/@@download/ENCFF466OTZ.bigWig hg19 released mixed read lengths, low read depth biological replicates with identical biosample insufficient read length, control insufficient read depth, insufficient read depth ENCFF270QAB bed narrowPeak optimal idr thresholded peaks ENCSR000EHP ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF001TDO, ENCFF050JYN, ENCFF188QEA, ENCFF278XFP 400425 ENCODE Processing Pipeline 932fe48d98f71d06e962f09468c47775 https://www.encodeproject.org/files/ENCFF270QAB/@@download/ENCFF270QAB.bed.gz hg19 released mixed read lengths, low read depth biological replicates with identical biosample insufficient read length, control insufficient read depth, insufficient read depth ENCFF887XIX bigBed narrowPeak optimal idr thresholded peaks ENCSR000EHP ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF270QAB 995178 ENCODE Processing Pipeline d592e659745aeb44db8ac50112c6d06a https://www.encodeproject.org/files/ENCFF887XIX/@@download/ENCFF887XIX.bigBed hg19 released mixed read lengths, low read depth biological replicates with identical biosample insufficient read length, control insufficient read depth, insufficient read depth ENCFF743JWE bam alignments ENCSR000EHP ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 1 27 ENCFF000YPQ, ENCFF807MUK 271314781 ENCODE Processing Pipeline 9dc27cb21a1a01b7c97cd83e3f789eb3 https://www.encodeproject.org/files/ENCFF743JWE/@@download/ENCFF743JWE.bam hg19 released mixed read lengths, low read depth biological replicates with identical biosample insufficient read length, control insufficient read depth, insufficient read depth ENCFF583QFG bam alignments ENCSR000EHP ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 2 27 ENCFF000YPO, ENCFF807MUK 480136451 ENCODE Processing Pipeline a7b75d298c99beea23ef656f02268cdb https://www.encodeproject.org/files/ENCFF583QFG/@@download/ENCFF583QFG.bam hg19 released mixed read lengths, low read depth biological replicates with identical biosample insufficient read length, control insufficient read depth, insufficient read depth ENCFF865SNR bigWig signal p-value ENCSR000EHP ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 2 ENCFF287WTN, ENCFF583QFG 236948865 ENCODE Processing Pipeline 95feae035a7306ac47e1719a3a83b936 https://www.encodeproject.org/files/ENCFF865SNR/@@download/ENCFF865SNR.bigWig hg19 released mixed read lengths, low read depth biological replicates with identical biosample insufficient read length, control insufficient read depth, insufficient read depth ENCFF011CZU bigWig signal p-value ENCSR000EHP ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 1 ENCFF287WTN, ENCFF743JWE 226723730 ENCODE Processing Pipeline d93fdecf965d107f0fc5bfeb0227509a https://www.encodeproject.org/files/ENCFF011CZU/@@download/ENCFF011CZU.bigWig hg19 released mixed read lengths, low read depth biological replicates with identical biosample insufficient read length, control insufficient read depth, insufficient read depth ENCFF020BWM bigBed narrowPeak peaks ENCSR000EHP ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 1 ENCFF050JYN 8880585 ENCODE Processing Pipeline b3aee6d300f7bc5a8f6725e4c9e04cc6 https://www.encodeproject.org/files/ENCFF020BWM/@@download/ENCFF020BWM.bigBed hg19 released mixed read lengths, low read depth biological replicates with identical biosample insufficient read length, control insufficient read depth, insufficient read depth ENCFF188QEA bed narrowPeak peaks ENCSR000EHP ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF287WTN, ENCFF583QFG, ENCFF743JWE 5889292 ENCODE Processing Pipeline 594dec0c561ac61635170ca86192f653 https://www.encodeproject.org/files/ENCFF188QEA/@@download/ENCFF188QEA.bed.gz hg19 released mixed read lengths, low read depth biological replicates with identical biosample insufficient read length, control insufficient read depth, insufficient read depth ENCFF401ZXJ bam unfiltered alignments ENCSR352BJL ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF318-human ENCAB426USL DNA False 2016-06-14 ENCODE 1 100 ENCFF328DHW, ENCFF370TGN, ENCFF807MUK 2735662603 ENCODE Processing Pipeline c7a32e25f0bcf374788c4ca37b40c6b5 https://www.encodeproject.org/files/ENCFF401ZXJ/@@download/ENCFF401ZXJ.bam hg19 released low read depth, mild to moderate bottlenecking missing control alignments ENCFF343WUW bam unfiltered alignments ENCSR352BJL ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF318-human ENCAB426USL DNA False 2016-06-14 ENCODE 2 100 ENCFF165TPB, ENCFF186WPX, ENCFF807MUK 3563187013 ENCODE Processing Pipeline 787c1610448f95eaa46509728c7572d7 https://www.encodeproject.org/files/ENCFF343WUW/@@download/ENCFF343WUW.bam hg19 released low read depth, mild to moderate bottlenecking missing control alignments ENCFF370TGN fastq reads ENCSR352BJL ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF318-human ENCAB426USL DNA False 2016-06-14 ENCODE 1 1 100 paired-ended 1 ENCFF328DHW 1222455235 Michael Snyder, Stanford 24e96f4f7990c80352b6afd8f90eef97 SRA:SRR5111468 https://www.encodeproject.org/files/ENCFF370TGN/@@download/ENCFF370TGN.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFF/ released low read depth, mild to moderate bottlenecking missing control alignments ENCFF186WPX fastq reads ENCSR352BJL ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF318-human ENCAB426USL DNA False 2016-06-14 ENCODE 2 1 100 paired-ended 1 ENCFF165TPB 1589939113 Michael Snyder, Stanford 08879882ead8c78c8f0518a243f9740d SRA:SRR5111469 https://www.encodeproject.org/files/ENCFF186WPX/@@download/ENCFF186WPX.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFD/ released low read depth, mild to moderate bottlenecking missing control alignments ENCFF165TPB fastq reads ENCSR352BJL ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF318-human ENCAB426USL DNA False 2016-06-14 ENCODE 2 1 100 paired-ended 2 ENCFF186WPX 1607638431 Michael Snyder, Stanford 29953552314c8e187a6c1c6451de129d SRA:SRR5111469 https://www.encodeproject.org/files/ENCFF165TPB/@@download/ENCFF165TPB.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFA/ released low read depth, mild to moderate bottlenecking missing control alignments ENCFF328DHW fastq reads ENCSR352BJL ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF318-human ENCAB426USL DNA False 2016-06-14 ENCODE 1 1 100 paired-ended 2 ENCFF370TGN 1237487415 Michael Snyder, Stanford 9f49c130d74f0917031448f30efa0d5a SRA:SRR5111468 https://www.encodeproject.org/files/ENCFF328DHW/@@download/ENCFF328DHW.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFH/ released low read depth, mild to moderate bottlenecking missing control alignments ENCFF175TNH bam alignments ENCSR352BJL ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF318-human ENCAB426USL DNA False 2016-06-14 ENCODE 1 100 ENCFF328DHW, ENCFF370TGN, ENCFF807MUK 2217456264 ENCODE Processing Pipeline fddfb26ffdf0dba142e96bf34512b16d https://www.encodeproject.org/files/ENCFF175TNH/@@download/ENCFF175TNH.bam hg19 released low read depth, mild to moderate bottlenecking missing control alignments ENCFF720PEL bam alignments ENCSR352BJL ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF318-human ENCAB426USL DNA False 2016-06-14 ENCODE 2 100 ENCFF165TPB, ENCFF186WPX, ENCFF807MUK 3005638018 ENCODE Processing Pipeline eb27a3af123af7d972b1b1ac360cf979 https://www.encodeproject.org/files/ENCFF720PEL/@@download/ENCFF720PEL.bam hg19 released low read depth, mild to moderate bottlenecking missing control alignments ENCFF611DOX bigWig signal p-value ENCSR352BJL ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF318-human ENCAB426USL DNA False 2016-06-14 ENCODE 1 ENCFF175TNH, ENCFF581ZJL 892782560 ENCODE Processing Pipeline be3ef4e95d43e92df85802d3c8ec2e5a https://www.encodeproject.org/files/ENCFF611DOX/@@download/ENCFF611DOX.bigWig hg19 released low read depth, mild to moderate bottlenecking missing control alignments ENCFF804TRB bigWig signal p-value ENCSR352BJL ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF318-human ENCAB426USL DNA False 2016-06-14 ENCODE 2 ENCFF051LWI, ENCFF720PEL 952701462 ENCODE Processing Pipeline 59b10db94967f970ca347202836e3570 https://www.encodeproject.org/files/ENCFF804TRB/@@download/ENCFF804TRB.bigWig hg19 released low read depth, mild to moderate bottlenecking missing control alignments ENCFF435WYY bigWig signal p-value ENCSR352BJL ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF318-human ENCAB426USL DNA False 2016-06-14 ENCODE 1, 2 ENCFF051LWI, ENCFF175TNH, ENCFF581ZJL, ENCFF720PEL 1562080741 ENCODE Processing Pipeline 01056806b9898928661fe36a75d1948b https://www.encodeproject.org/files/ENCFF435WYY/@@download/ENCFF435WYY.bigWig hg19 released low read depth, mild to moderate bottlenecking missing control alignments ENCFF711VAJ bigWig fold change over control ENCSR352BJL ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF318-human ENCAB426USL DNA False 2016-06-14 ENCODE 1 ENCFF175TNH, ENCFF581ZJL 850742343 ENCODE Processing Pipeline fa96e7ca2c0bf54932a1a629c2e5c7e9 https://www.encodeproject.org/files/ENCFF711VAJ/@@download/ENCFF711VAJ.bigWig hg19 released low read depth, mild to moderate bottlenecking missing control alignments ENCFF966FHO bigWig fold change over control ENCSR352BJL ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF318-human ENCAB426USL DNA False 2016-06-14 ENCODE 2 ENCFF051LWI, ENCFF720PEL 984573330 ENCODE Processing Pipeline 10f13f00ae5a639b79f22bd1b610b440 https://www.encodeproject.org/files/ENCFF966FHO/@@download/ENCFF966FHO.bigWig hg19 released low read depth, mild to moderate bottlenecking missing control alignments ENCFF609CBO bigWig fold change over control ENCSR352BJL ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF318-human ENCAB426USL DNA False 2016-06-14 ENCODE 1, 2 ENCFF051LWI, ENCFF175TNH, ENCFF581ZJL, ENCFF720PEL 1818991755 ENCODE Processing Pipeline 76e315c5c500edbf3e94d9fb26083a4e https://www.encodeproject.org/files/ENCFF609CBO/@@download/ENCFF609CBO.bigWig hg19 released low read depth, mild to moderate bottlenecking missing control alignments ENCFF898ILE bed narrowPeak peaks ENCSR352BJL ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF318-human ENCAB426USL DNA False 2016-06-14 ENCODE 1, 2 ENCFF051LWI, ENCFF175TNH, ENCFF581ZJL, ENCFF720PEL 7151903 ENCODE Processing Pipeline f7621d311206eb0618a9bca6441fb0c1 https://www.encodeproject.org/files/ENCFF898ILE/@@download/ENCFF898ILE.bed.gz hg19 released low read depth, mild to moderate bottlenecking missing control alignments ENCFF244YZX bed narrowPeak peaks ENCSR352BJL ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF318-human ENCAB426USL DNA False 2016-06-14 ENCODE 1 ENCFF175TNH, ENCFF581ZJL 6318220 ENCODE Processing Pipeline 7690abbf3fc7c97d08a017e957604a05 https://www.encodeproject.org/files/ENCFF244YZX/@@download/ENCFF244YZX.bed.gz hg19 released low read depth, mild to moderate bottlenecking missing control alignments ENCFF050TDD bed narrowPeak peaks ENCSR352BJL ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF318-human ENCAB426USL DNA False 2016-06-14 ENCODE 2 ENCFF051LWI, ENCFF720PEL 6579727 ENCODE Processing Pipeline ef27ea44e3d30e879a25641255d79101 https://www.encodeproject.org/files/ENCFF050TDD/@@download/ENCFF050TDD.bed.gz hg19 released low read depth, mild to moderate bottlenecking missing control alignments ENCFF825WLM bigBed narrowPeak peaks ENCSR352BJL ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF318-human ENCAB426USL DNA False 2016-06-14 ENCODE 1 ENCFF244YZX 13262213 ENCODE Processing Pipeline e43fd35bb15840a95705c8c062209ca5 https://www.encodeproject.org/files/ENCFF825WLM/@@download/ENCFF825WLM.bigBed hg19 released low read depth, mild to moderate bottlenecking missing control alignments ENCFF625WGN bigBed narrowPeak peaks ENCSR352BJL ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF318-human ENCAB426USL DNA False 2016-06-14 ENCODE 2 ENCFF050TDD 13331336 ENCODE Processing Pipeline ebfda0a5e32ca054f1716ace6df93234 https://www.encodeproject.org/files/ENCFF625WGN/@@download/ENCFF625WGN.bigBed hg19 released low read depth, mild to moderate bottlenecking missing control alignments ENCFF927TLB bigBed narrowPeak peaks ENCSR352BJL ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF318-human ENCAB426USL DNA False 2016-06-14 ENCODE 1, 2 ENCFF898ILE 13193758 ENCODE Processing Pipeline c7e880b4411ea007611406fcdd233e50 https://www.encodeproject.org/files/ENCFF927TLB/@@download/ENCFF927TLB.bigBed hg19 released low read depth, mild to moderate bottlenecking missing control alignments ENCFF616JGV bam unfiltered alignments ENCSR352BJL ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF318-human ENCAB426USL DNA False 2016-06-14 ENCODE 1 100 ENCFF328DHW, ENCFF370TGN, ENCFF643CGH 2738388787 ENCODE Processing Pipeline 9e4db182394f62033eede2c032705845 https://www.encodeproject.org/files/ENCFF616JGV/@@download/ENCFF616JGV.bam GRCh38 released low read depth, mild to moderate bottlenecking missing control alignments ENCFF696EGT bam unfiltered alignments ENCSR352BJL ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF318-human ENCAB426USL DNA False 2016-06-14 ENCODE 2 100 ENCFF165TPB, ENCFF186WPX, ENCFF643CGH 3567486611 ENCODE Processing Pipeline 5afe655a05478462bb4dac5aff2ae843 https://www.encodeproject.org/files/ENCFF696EGT/@@download/ENCFF696EGT.bam GRCh38 released low read depth, mild to moderate bottlenecking missing control alignments ENCFF019RWB bam alignments ENCSR352BJL ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF318-human ENCAB426USL DNA False 2016-06-14 ENCODE 1 100 ENCFF328DHW, ENCFF370TGN, ENCFF643CGH 2218229655 ENCODE Processing Pipeline bb5f9c4fe1a5cf87962476bf3bb9e60f https://www.encodeproject.org/files/ENCFF019RWB/@@download/ENCFF019RWB.bam GRCh38 released low read depth, mild to moderate bottlenecking missing control alignments ENCFF353EFN bam alignments ENCSR352BJL ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF318-human ENCAB426USL DNA False 2016-06-14 ENCODE 2 100 ENCFF165TPB, ENCFF186WPX, ENCFF643CGH 3007341660 ENCODE Processing Pipeline 946b1f96d4c37060e4cc179193cd356a https://www.encodeproject.org/files/ENCFF353EFN/@@download/ENCFF353EFN.bam GRCh38 released low read depth, mild to moderate bottlenecking missing control alignments ENCFF386OOF bigWig signal p-value ENCSR352BJL ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF318-human ENCAB426USL DNA False 2016-06-14 ENCODE 1 ENCFF019RWB 870179064 ENCODE Processing Pipeline 522ae9828c9e60da827735afa86496a5 https://www.encodeproject.org/files/ENCFF386OOF/@@download/ENCFF386OOF.bigWig GRCh38 released low read depth, mild to moderate bottlenecking missing control alignments ENCFF660JMD bigWig signal p-value ENCSR352BJL ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF318-human ENCAB426USL DNA False 2016-06-14 ENCODE 2 ENCFF353EFN 963192277 ENCODE Processing Pipeline d6cec7ca09a7ce559dc73abebd566701 https://www.encodeproject.org/files/ENCFF660JMD/@@download/ENCFF660JMD.bigWig GRCh38 released low read depth, mild to moderate bottlenecking missing control alignments ENCFF297RIW bigWig signal p-value ENCSR352BJL ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF318-human ENCAB426USL DNA False 2016-06-14 ENCODE 1, 2 ENCFF019RWB, ENCFF353EFN 1466676558 ENCODE Processing Pipeline cdee10debb7f35d08d8b6cecbf116d5e https://www.encodeproject.org/files/ENCFF297RIW/@@download/ENCFF297RIW.bigWig GRCh38 released low read depth, mild to moderate bottlenecking missing control alignments ENCFF673OAT bigWig fold change over control ENCSR352BJL ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF318-human ENCAB426USL DNA False 2016-06-14 ENCODE 1 ENCFF019RWB 851008094 ENCODE Processing Pipeline dd7dd5f3a539947708415b4c8f465b9d https://www.encodeproject.org/files/ENCFF673OAT/@@download/ENCFF673OAT.bigWig GRCh38 released low read depth, mild to moderate bottlenecking missing control alignments ENCFF340DHB bigWig fold change over control ENCSR352BJL ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF318-human ENCAB426USL DNA False 2016-06-14 ENCODE 2 ENCFF353EFN 1005127101 ENCODE Processing Pipeline bebeb5a1c9a7633b817703eb4170bb9f https://www.encodeproject.org/files/ENCFF340DHB/@@download/ENCFF340DHB.bigWig GRCh38 released low read depth, mild to moderate bottlenecking missing control alignments ENCFF373YVF bigWig fold change over control ENCSR352BJL ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF318-human ENCAB426USL DNA False 2016-06-14 ENCODE 1, 2 ENCFF019RWB, ENCFF353EFN 1794958796 ENCODE Processing Pipeline 89c4235a81fb56563f7d496e427462ef https://www.encodeproject.org/files/ENCFF373YVF/@@download/ENCFF373YVF.bigWig GRCh38 released low read depth, mild to moderate bottlenecking missing control alignments ENCFF367RSU bed narrowPeak peaks ENCSR352BJL ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF318-human ENCAB426USL DNA False 2016-06-14 ENCODE 1 ENCFF019RWB 6175526 ENCODE Processing Pipeline 68afc59870a0384a45b17e4f50939bcc https://www.encodeproject.org/files/ENCFF367RSU/@@download/ENCFF367RSU.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking missing control alignments ENCFF471OVB bed narrowPeak peaks ENCSR352BJL ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF318-human ENCAB426USL DNA False 2016-06-14 ENCODE 2 ENCFF353EFN 6427343 ENCODE Processing Pipeline 21e810e7ea49a4074f863f29ba8cbe48 https://www.encodeproject.org/files/ENCFF471OVB/@@download/ENCFF471OVB.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking missing control alignments ENCFF736YXX bed narrowPeak peaks ENCSR352BJL ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF318-human ENCAB426USL DNA False 2016-06-14 ENCODE 1, 2 ENCFF019RWB, ENCFF353EFN 7109326 ENCODE Processing Pipeline 6ed19628b6759b0f24de3178832a2252 https://www.encodeproject.org/files/ENCFF736YXX/@@download/ENCFF736YXX.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking missing control alignments ENCFF640TIS bigBed narrowPeak peaks ENCSR352BJL ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF318-human ENCAB426USL DNA False 2016-06-14 ENCODE 1 ENCFF367RSU 13254745 ENCODE Processing Pipeline bc8a59a2a2446097c9d962134d57e8c5 https://www.encodeproject.org/files/ENCFF640TIS/@@download/ENCFF640TIS.bigBed GRCh38 released low read depth, mild to moderate bottlenecking missing control alignments ENCFF070RVC bigBed narrowPeak peaks ENCSR352BJL ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF318-human ENCAB426USL DNA False 2016-06-14 ENCODE 1, 2 ENCFF736YXX 13205945 ENCODE Processing Pipeline 3a7283b39dea6a06ba83c4c9e0b3a291 https://www.encodeproject.org/files/ENCFF070RVC/@@download/ENCFF070RVC.bigBed GRCh38 released low read depth, mild to moderate bottlenecking missing control alignments ENCFF308LVW bigBed narrowPeak peaks ENCSR352BJL ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF318-human ENCAB426USL DNA False 2016-06-14 ENCODE 2 ENCFF471OVB 13331120 ENCODE Processing Pipeline e18687c70e828b3a0350839fd262eca2 https://www.encodeproject.org/files/ENCFF308LVW/@@download/ENCFF308LVW.bigBed GRCh38 released low read depth, mild to moderate bottlenecking missing control alignments ENCFF772WLM bed narrowPeak conservative idr thresholded peaks ENCSR352BJL ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF318-human ENCAB426USL DNA False 2016-06-14 ENCODE 1, 2 ENCFF367RSU, ENCFF419RSJ, ENCFF471OVB, ENCFF736YXX 151635 ENCODE Processing Pipeline dd1229a236355ba53a00a6d8e27267ce https://www.encodeproject.org/files/ENCFF772WLM/@@download/ENCFF772WLM.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking missing control alignments ENCFF456RXF bigBed narrowPeak conservative idr thresholded peaks ENCSR352BJL ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF318-human ENCAB426USL DNA False 2016-06-14 ENCODE 1, 2 ENCFF772WLM 389680 ENCODE Processing Pipeline cd5241018b290f58b6952e20358e8d9d https://www.encodeproject.org/files/ENCFF456RXF/@@download/ENCFF456RXF.bigBed GRCh38 released low read depth, mild to moderate bottlenecking missing control alignments ENCFF577LQR bed narrowPeak optimal idr thresholded peaks ENCSR352BJL ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF318-human ENCAB426USL DNA False 2016-06-14 ENCODE 1, 2 ENCFF367RSU, ENCFF419RSJ, ENCFF471OVB, ENCFF736YXX 184702 ENCODE Processing Pipeline bb9c159f53df46172d968d0f6d728c72 https://www.encodeproject.org/files/ENCFF577LQR/@@download/ENCFF577LQR.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking missing control alignments ENCFF208ZBV bigBed narrowPeak optimal idr thresholded peaks ENCSR352BJL ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF318-human ENCAB426USL DNA False 2016-06-14 ENCODE 1, 2 ENCFF577LQR 448404 ENCODE Processing Pipeline 59082c8ffb23bb3b8ef8a3eb4c634bd9 https://www.encodeproject.org/files/ENCFF208ZBV/@@download/ENCFF208ZBV.bigBed GRCh38 released low read depth, mild to moderate bottlenecking missing control alignments ENCFF921WMN bed narrowPeak optimal idr thresholded peaks ENCSR352BJL ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF318-human ENCAB426USL DNA False 2016-06-14 ENCODE 1, 2 ENCFF001TDO, ENCFF050TDD, ENCFF244YZX, ENCFF898ILE 169082 ENCODE Processing Pipeline 20b395a93cc75d57adb1473906fc3ec0 https://www.encodeproject.org/files/ENCFF921WMN/@@download/ENCFF921WMN.bed.gz hg19 released low read depth, mild to moderate bottlenecking missing control alignments ENCFF400OZY bigBed narrowPeak optimal idr thresholded peaks ENCSR352BJL ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF318-human ENCAB426USL DNA False 2016-06-14 ENCODE 1, 2 ENCFF921WMN 349390 ENCODE Processing Pipeline 71b4810158ee293085c8e3fb03d9697f https://www.encodeproject.org/files/ENCFF400OZY/@@download/ENCFF400OZY.bigBed hg19 released low read depth, mild to moderate bottlenecking missing control alignments ENCFF781MGX bigBed narrowPeak conservative idr thresholded peaks ENCSR352BJL ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF318-human ENCAB426USL DNA False 2016-06-14 ENCODE 1, 2 ENCFF223MVK 286509 ENCODE Processing Pipeline b8e6503ed8c1d1e429a285e3b55f75a7 https://www.encodeproject.org/files/ENCFF781MGX/@@download/ENCFF781MGX.bigBed hg19 released low read depth, mild to moderate bottlenecking missing control alignments ENCFF223MVK bed narrowPeak conservative idr thresholded peaks ENCSR352BJL ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF318-human ENCAB426USL DNA False 2016-06-14 ENCODE 1, 2 ENCFF001TDO, ENCFF050TDD, ENCFF244YZX, ENCFF898ILE 123774 ENCODE Processing Pipeline 167b03474eca1be06a0e11484acec536 https://www.encodeproject.org/files/ENCFF223MVK/@@download/ENCFF223MVK.bed.gz hg19 released low read depth, mild to moderate bottlenecking missing control alignments ENCFF000YIN bam alignments ENCSR000EGH ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute JUN-human ENCAB000AER DNA see document see document False 2012-05-14 ENCODE 1 1 301737593 Michael Snyder, Stanford 24d0a7c87bec958d9b446e532378c932 https://www.encodeproject.org/files/ENCFF000YIN/@@download/ENCFF000YIN.bam hg19 archived control low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample, missing derived_from insufficient read depth ENCFF000YIO bigBed narrowPeak peaks ENCSR000EGH ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute JUN-human ENCAB000AER DNA see document see document False 2012-05-14 ENCODE ENCFF001VMK 1692646 Michael Snyder, Stanford 0ec6e30aab81225c2ede3635ebe0c09d https://www.encodeproject.org/files/ENCFF000YIO/@@download/ENCFF000YIO.bigBed hg19 archived control low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF000YIP fastq reads ENCSR000EGH ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute JUN-human ENCAB000AER DNA see document see document False 2012-05-14 ENCODE 1 1 36 single-ended 572383385 Michael Snyder, Stanford 82a5df99103a8728d27e7d0d616fcebf https://www.encodeproject.org/files/ENCFF000YIP/@@download/ENCFF000YIP.fastq.gz Illumina Genome Analyzer /files/ENCFF000YOV/ released control low read depth, mild to moderate bottlenecking, inconsistent control read length, low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF000YIR fastq reads ENCSR000EGH ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute JUN-human ENCAB000AER DNA see document see document False 2012-05-14 ENCODE 2 1 36 single-ended 806621221 Michael Snyder, Stanford 11658698f549cc3e9a74762091e2bea0 https://www.encodeproject.org/files/ENCFF000YIR/@@download/ENCFF000YIR.fastq.gz Illumina Genome Analyzer /files/ENCFF000YOV/ released control low read depth, inconsistent control read length, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF000YIT bigWig signal ENCSR000EGH ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute JUN-human ENCAB000AER DNA see document see document False 2012-05-14 ENCODE 263327994 Michael Snyder, Stanford f29d6558de2a37700d177f658d0d488f https://www.encodeproject.org/files/ENCFF000YIT/@@download/ENCFF000YIT.bigWig hg19 archived control low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample, missing derived_from insufficient read depth ENCFF000YIU bam alignments ENCSR000EGH ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute JUN-human ENCAB000AER DNA see document see document False 2012-05-14 ENCODE 2 1 362753760 Michael Snyder, Stanford 3ba60bb3e1d87454e0900c28cd8852c6 https://www.encodeproject.org/files/ENCFF000YIU/@@download/ENCFF000YIU.bam hg19 archived control low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample, missing derived_from insufficient read depth ENCFF001VMK bed narrowPeak peaks ENCSR000EGH ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute JUN-human ENCAB000AER DNA see document see document False 2012-05-14 ENCODE 742055 Michael Snyder, Stanford 1f9d7b9a010e07c19113f25635dc0d41 https://www.encodeproject.org/files/ENCFF001VMK/@@download/ENCFF001VMK.bed.gz hg19 archived control low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample, missing derived_from insufficient read depth ENCFF002CVY bed narrowPeak optimal idr thresholded peaks ENCSR000EGH ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute JUN-human ENCAB000AER DNA see document see document False 2012-05-14 ENCODE 217184 ENCODE Consortium Analysis Working Group c226b910f32186397ea83661cc905568 https://www.encodeproject.org/files/ENCFF002CVY/@@download/ENCFF002CVY.bed.gz hg19 archived control low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample, missing derived_from insufficient read depth ENCFF394IDA bigBed narrowPeak optimal idr thresholded peaks ENCSR000EGH ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute JUN-human ENCAB000AER DNA see document see document False 2012-05-14 ENCODE ENCFF002CVY 491806 ENCODE Consortium 4d75a90c205b1582df876b2791098304 https://www.encodeproject.org/files/ENCFF394IDA/@@download/ENCFF394IDA.bigBed hg19 archived control low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF931WZH bam unfiltered alignments ENCSR000EGH ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute JUN-human ENCAB000AER DNA see document see document False 2012-05-14 ENCODE 1 27 ENCFF000YIP, ENCFF643CGH 550227053 ENCODE Processing Pipeline f16c5059a610154692134428282ced34 https://www.encodeproject.org/files/ENCFF931WZH/@@download/ENCFF931WZH.bam GRCh38 released control low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF703YNU bam alignments ENCSR000EGH ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute JUN-human ENCAB000AER DNA see document see document False 2012-05-14 ENCODE 1 27 ENCFF000YIP, ENCFF643CGH 293142941 ENCODE Processing Pipeline 1e0c886b12ee6448a3414fe421b67360 https://www.encodeproject.org/files/ENCFF703YNU/@@download/ENCFF703YNU.bam GRCh38 released control low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF851ENM bam unfiltered alignments ENCSR000EGH ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute JUN-human ENCAB000AER DNA see document see document False 2012-05-14 ENCODE 1 27 ENCFF000YIP, ENCFF807MUK 548646019 ENCODE Processing Pipeline fee6f335b650ef4709f7af60e710d682 https://www.encodeproject.org/files/ENCFF851ENM/@@download/ENCFF851ENM.bam hg19 released control low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF943CTI bam alignments ENCSR000EGH ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute JUN-human ENCAB000AER DNA see document see document False 2012-05-14 ENCODE 1 27 ENCFF000YIP, ENCFF807MUK 293552316 ENCODE Processing Pipeline 0c9414756feae2424afe7b0ceb73e7ad https://www.encodeproject.org/files/ENCFF943CTI/@@download/ENCFF943CTI.bam hg19 released control low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF876USE bam unfiltered alignments ENCSR000EGH ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute JUN-human ENCAB000AER DNA see document see document False 2012-05-14 ENCODE 2 27 ENCFF000YIR, ENCFF807MUK 739254485 ENCODE Processing Pipeline 0fcad2813b5c52e18e4a4e90e0392a66 https://www.encodeproject.org/files/ENCFF876USE/@@download/ENCFF876USE.bam hg19 released control low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF892MVR bam alignments ENCSR000EGH ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute JUN-human ENCAB000AER DNA see document see document False 2012-05-14 ENCODE 2 27 ENCFF000YIR, ENCFF807MUK 322930574 ENCODE Processing Pipeline 10514b60f5329e7a0f1d1c86d9b356b8 https://www.encodeproject.org/files/ENCFF892MVR/@@download/ENCFF892MVR.bam hg19 released control low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF790LTB bam unfiltered alignments ENCSR000EGH ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute JUN-human ENCAB000AER DNA see document see document False 2012-05-14 ENCODE 2 27 ENCFF000YIR, ENCFF643CGH 741665904 ENCODE Processing Pipeline 1783d2dcfd62f6cb7ec6ee0c74ea41c6 https://www.encodeproject.org/files/ENCFF790LTB/@@download/ENCFF790LTB.bam GRCh38 released control low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF527CTN bam alignments ENCSR000EGH ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute JUN-human ENCAB000AER DNA see document see document False 2012-05-14 ENCODE 2 27 ENCFF000YIR, ENCFF643CGH 322502619 ENCODE Processing Pipeline 7ee407dc16dadc50dd3711cabab9eafc https://www.encodeproject.org/files/ENCFF527CTN/@@download/ENCFF527CTN.bam GRCh38 released control low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF269SWT bigWig signal p-value ENCSR000EGH ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute JUN-human ENCAB000AER DNA see document see document False 2012-05-14 ENCODE 1 ENCFF650MOB, ENCFF943CTI 317495413 ENCODE Processing Pipeline 91513ad3a09a5d824254ec995c1f9927 https://www.encodeproject.org/files/ENCFF269SWT/@@download/ENCFF269SWT.bigWig hg19 released control low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF022ERH bigWig signal p-value ENCSR000EGH ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute JUN-human ENCAB000AER DNA see document see document False 2012-05-14 ENCODE 1 ENCFF703YNU, ENCFF767FSP 282478127 ENCODE Processing Pipeline a67e88a2558b433d9a6a8669f2e2b5f9 https://www.encodeproject.org/files/ENCFF022ERH/@@download/ENCFF022ERH.bigWig GRCh38 released control low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF322YOE bigWig signal p-value ENCSR000EGH ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute JUN-human ENCAB000AER DNA see document see document False 2012-05-14 ENCODE 2 ENCFF650MOB, ENCFF892MVR 293998758 ENCODE Processing Pipeline 9386d97cd3f741167a848ac0d80fc456 https://www.encodeproject.org/files/ENCFF322YOE/@@download/ENCFF322YOE.bigWig hg19 released control low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF127GAE bigWig signal p-value ENCSR000EGH ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute JUN-human ENCAB000AER DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF650MOB, ENCFF892MVR, ENCFF943CTI 331825155 ENCODE Processing Pipeline 8fa226037d983825bde0b1fd8bf4ffe9 https://www.encodeproject.org/files/ENCFF127GAE/@@download/ENCFF127GAE.bigWig hg19 released control low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF411UAB bigWig signal p-value ENCSR000EGH ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute JUN-human ENCAB000AER DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF527CTN, ENCFF703YNU, ENCFF767FSP 331472457 ENCODE Processing Pipeline 249c5fdce684f08c3afa0702eb2c5bdf https://www.encodeproject.org/files/ENCFF411UAB/@@download/ENCFF411UAB.bigWig GRCh38 released control low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF688CWK bigWig fold change over control ENCSR000EGH ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute JUN-human ENCAB000AER DNA see document see document False 2012-05-14 ENCODE 1 ENCFF650MOB, ENCFF943CTI 180511824 ENCODE Processing Pipeline d25a58261f070ea04a6baf8d87dcae40 https://www.encodeproject.org/files/ENCFF688CWK/@@download/ENCFF688CWK.bigWig hg19 released control low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF716CBU bigWig signal p-value ENCSR000EGH ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute JUN-human ENCAB000AER DNA see document see document False 2012-05-14 ENCODE 2 ENCFF527CTN, ENCFF767FSP 287492044 ENCODE Processing Pipeline f8f3f0f99862ed1845ae58ad33a376a0 https://www.encodeproject.org/files/ENCFF716CBU/@@download/ENCFF716CBU.bigWig GRCh38 released control low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF265YQH bigWig fold change over control ENCSR000EGH ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute JUN-human ENCAB000AER DNA see document see document False 2012-05-14 ENCODE 1 ENCFF703YNU, ENCFF767FSP 181398819 ENCODE Processing Pipeline c58f9d84e23e6a2bc11d647ee0d93e5f https://www.encodeproject.org/files/ENCFF265YQH/@@download/ENCFF265YQH.bigWig GRCh38 released control low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF586WBY bigWig fold change over control ENCSR000EGH ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute JUN-human ENCAB000AER DNA see document see document False 2012-05-14 ENCODE 2 ENCFF650MOB, ENCFF892MVR 198123940 ENCODE Processing Pipeline d3e5623895b49313101ba8882d19d9e1 https://www.encodeproject.org/files/ENCFF586WBY/@@download/ENCFF586WBY.bigWig hg19 released control low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF837KEV bigWig fold change over control ENCSR000EGH ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute JUN-human ENCAB000AER DNA see document see document False 2012-05-14 ENCODE 2 ENCFF527CTN, ENCFF767FSP 197773080 ENCODE Processing Pipeline df86c6f40b3c2c2aa69273b8287e1136 https://www.encodeproject.org/files/ENCFF837KEV/@@download/ENCFF837KEV.bigWig GRCh38 released control low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF585OJQ bigWig fold change over control ENCSR000EGH ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute JUN-human ENCAB000AER DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF527CTN, ENCFF703YNU, ENCFF767FSP 331863528 ENCODE Processing Pipeline 8c1f8dc46af8669983ccf2d061542c79 https://www.encodeproject.org/files/ENCFF585OJQ/@@download/ENCFF585OJQ.bigWig GRCh38 released control low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF506EKM bigWig fold change over control ENCSR000EGH ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute JUN-human ENCAB000AER DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF650MOB, ENCFF892MVR, ENCFF943CTI 334404610 ENCODE Processing Pipeline a0909c4fe9c2da4d4b38624e87945b59 https://www.encodeproject.org/files/ENCFF506EKM/@@download/ENCFF506EKM.bigWig hg19 released control low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF257FNC bed narrowPeak peaks ENCSR000EGH ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute JUN-human ENCAB000AER DNA see document see document False 2012-05-14 ENCODE 1 ENCFF650MOB, ENCFF943CTI 3403440 ENCODE Processing Pipeline c7c78f86b4257bf45fb74f8d62b94c06 https://www.encodeproject.org/files/ENCFF257FNC/@@download/ENCFF257FNC.bed.gz hg19 released control low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF063HEH bed narrowPeak peaks ENCSR000EGH ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute JUN-human ENCAB000AER DNA see document see document False 2012-05-14 ENCODE 2 ENCFF650MOB, ENCFF892MVR 3839966 ENCODE Processing Pipeline ffad26b8cc4cbfb3dcaa7882c1958b37 https://www.encodeproject.org/files/ENCFF063HEH/@@download/ENCFF063HEH.bed.gz hg19 released control low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF041PDN bed narrowPeak peaks ENCSR000EGH ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute JUN-human ENCAB000AER DNA see document see document False 2012-05-14 ENCODE 1 ENCFF703YNU, ENCFF767FSP 3393394 ENCODE Processing Pipeline 5b49952b52e03804593e5623a111521b https://www.encodeproject.org/files/ENCFF041PDN/@@download/ENCFF041PDN.bed.gz GRCh38 released control low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF023XCT bigBed narrowPeak peaks ENCSR000EGH ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute JUN-human ENCAB000AER DNA see document see document False 2012-05-14 ENCODE 1 ENCFF257FNC 6854133 ENCODE Processing Pipeline a2e2a8e2a63623dcfc3bc711c7344f34 https://www.encodeproject.org/files/ENCFF023XCT/@@download/ENCFF023XCT.bigBed hg19 released control low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF726RDS bed narrowPeak peaks ENCSR000EGH ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute JUN-human ENCAB000AER DNA see document see document False 2012-05-14 ENCODE 2 ENCFF527CTN, ENCFF767FSP 3793663 ENCODE Processing Pipeline d56f6efef7152583267b5258d5173b9b https://www.encodeproject.org/files/ENCFF726RDS/@@download/ENCFF726RDS.bed.gz GRCh38 released control low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF767GKW bed narrowPeak peaks ENCSR000EGH ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute JUN-human ENCAB000AER DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF650MOB, ENCFF892MVR, ENCFF943CTI 4353278 ENCODE Processing Pipeline ae495c1e29894309630830002f904f26 https://www.encodeproject.org/files/ENCFF767GKW/@@download/ENCFF767GKW.bed.gz hg19 released control low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF535SJR bigBed narrowPeak peaks ENCSR000EGH ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute JUN-human ENCAB000AER DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF767GKW 10371872 ENCODE Processing Pipeline 28b7bf7be6a04e8d6193bb61e61a8e52 https://www.encodeproject.org/files/ENCFF535SJR/@@download/ENCFF535SJR.bigBed hg19 released control low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF858PRX bed narrowPeak peaks ENCSR000EGH ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute JUN-human ENCAB000AER DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF527CTN, ENCFF703YNU, ENCFF767FSP 4338955 ENCODE Processing Pipeline 1f5d2513c86102779f95d0fa3084b382 https://www.encodeproject.org/files/ENCFF858PRX/@@download/ENCFF858PRX.bed.gz GRCh38 released control low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF160JKT bigBed narrowPeak peaks ENCSR000EGH ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute JUN-human ENCAB000AER DNA see document see document False 2012-05-14 ENCODE 2 ENCFF063HEH 7819906 ENCODE Processing Pipeline a1005e5952787081c19b4db22ad777d8 https://www.encodeproject.org/files/ENCFF160JKT/@@download/ENCFF160JKT.bigBed hg19 released control low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF139JHF bigBed narrowPeak peaks ENCSR000EGH ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute JUN-human ENCAB000AER DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF858PRX 10346316 ENCODE Processing Pipeline 5e5a2dd47e54e90ae68bed400e87397c https://www.encodeproject.org/files/ENCFF139JHF/@@download/ENCFF139JHF.bigBed GRCh38 released control low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF504XNC bigBed narrowPeak peaks ENCSR000EGH ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute JUN-human ENCAB000AER DNA see document see document False 2012-05-14 ENCODE 1 ENCFF041PDN 6841621 ENCODE Processing Pipeline 3fa23726856c90e49f6796ece2680a40 https://www.encodeproject.org/files/ENCFF504XNC/@@download/ENCFF504XNC.bigBed GRCh38 released control low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF056IOC bed narrowPeak conservative idr thresholded peaks ENCSR000EGH ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute JUN-human ENCAB000AER DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF001TDO, ENCFF063HEH, ENCFF257FNC, ENCFF767GKW 160895 ENCODE Processing Pipeline 8dbc9f5ea57d5504cb9c5190c5bcbfd5 https://www.encodeproject.org/files/ENCFF056IOC/@@download/ENCFF056IOC.bed.gz hg19 released control low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF538EEX bigBed narrowPeak peaks ENCSR000EGH ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute JUN-human ENCAB000AER DNA see document see document False 2012-05-14 ENCODE 2 ENCFF726RDS 7734758 ENCODE Processing Pipeline 365c4b3acfdff24c656d9bec3f67804c https://www.encodeproject.org/files/ENCFF538EEX/@@download/ENCFF538EEX.bigBed GRCh38 released control low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF318SAW bed narrowPeak conservative idr thresholded peaks ENCSR000EGH ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute JUN-human ENCAB000AER DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF041PDN, ENCFF419RSJ, ENCFF726RDS, ENCFF858PRX 160858 ENCODE Processing Pipeline f3175a61160ed2eb20f0fc3e0b14b115 https://www.encodeproject.org/files/ENCFF318SAW/@@download/ENCFF318SAW.bed.gz GRCh38 released control low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF077UYM bed narrowPeak optimal idr thresholded peaks ENCSR000EGH ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute JUN-human ENCAB000AER DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF001TDO, ENCFF063HEH, ENCFF257FNC, ENCFF767GKW 166535 ENCODE Processing Pipeline 1bfdc3d3c368a4f534014f7554f50dcd https://www.encodeproject.org/files/ENCFF077UYM/@@download/ENCFF077UYM.bed.gz hg19 released control low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF154XXU bigBed narrowPeak conservative idr thresholded peaks ENCSR000EGH ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute JUN-human ENCAB000AER DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF056IOC 351006 ENCODE Processing Pipeline 723281b5ad7d5faa05dc14f624542206 https://www.encodeproject.org/files/ENCFF154XXU/@@download/ENCFF154XXU.bigBed hg19 released control low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF970VGI bigBed narrowPeak optimal idr thresholded peaks ENCSR000EGH ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute JUN-human ENCAB000AER DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF672LKE 366965 ENCODE Processing Pipeline 5d6be9b378868aefed2e28dc2e9e9288 https://www.encodeproject.org/files/ENCFF970VGI/@@download/ENCFF970VGI.bigBed GRCh38 released control low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF614OGK bigBed narrowPeak conservative idr thresholded peaks ENCSR000EGH ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute JUN-human ENCAB000AER DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF318SAW 298579 ENCODE Processing Pipeline 0dea1453f18ed1c8d2e150abfeff0944 https://www.encodeproject.org/files/ENCFF614OGK/@@download/ENCFF614OGK.bigBed GRCh38 released control low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF237APC bigBed narrowPeak optimal idr thresholded peaks ENCSR000EGH ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute JUN-human ENCAB000AER DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF077UYM 359671 ENCODE Processing Pipeline c34a06b60e2836587a79940bce143618 https://www.encodeproject.org/files/ENCFF237APC/@@download/ENCFF237APC.bigBed hg19 released control low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF672LKE bed narrowPeak optimal idr thresholded peaks ENCSR000EGH ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute JUN-human ENCAB000AER DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF041PDN, ENCFF419RSJ, ENCFF726RDS, ENCFF858PRX 166185 ENCODE Processing Pipeline 9ef1aec820c35f0188e0fcc19d0e91af https://www.encodeproject.org/files/ENCFF672LKE/@@download/ENCFF672LKE.bed.gz GRCh38 released control low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF135WKL fastq reads ENCSR072VUO ChIP-seq EFO:0002067 K562 cell line Homo sapiens SAFB-human ENCAB180KRZ DNA SDS formaldehyde False 2017-12-01 ENCODE 1 1 40 single-ended 613238750 Xiang-Dong Fu, UCSD 8305ac9a298b3313d24fc96f7e5834ff https://www.encodeproject.org/files/ENCFF135WKL/@@download/ENCFF135WKL.fastq.gz Illumina HiSeq 2500 /files/ENCFF521UDO/ released borderline replicate concordance, low read depth, low read length experiment not submitted to GEO ENCFF228GOX fastq reads ENCSR072VUO ChIP-seq EFO:0002067 K562 cell line Homo sapiens SAFB-human ENCAB180KRZ DNA SDS formaldehyde False 2017-12-01 ENCODE 2 1 40 single-ended 550173484 Xiang-Dong Fu, UCSD c99ef0f7cbf3e73ff1f0fd0e446332d6 https://www.encodeproject.org/files/ENCFF228GOX/@@download/ENCFF228GOX.fastq.gz Illumina HiSeq 2500 /files/ENCFF343MYT/ released borderline replicate concordance, low read depth, low read length experiment not submitted to GEO ENCFF937ONB bam alignments ENCSR072VUO ChIP-seq EFO:0002067 K562 cell line Homo sapiens SAFB-human ENCAB180KRZ DNA SDS formaldehyde False 2017-12-01 ENCODE 2 40 ENCFF228GOX, ENCFF807MUK 501490274 ENCODE Processing Pipeline 5bae9d2ff7f1e8b4434cd944cd9fa4f7 https://www.encodeproject.org/files/ENCFF937ONB/@@download/ENCFF937ONB.bam hg19 released borderline replicate concordance, low read depth, low read length experiment not submitted to GEO ENCFF164HNV bam unfiltered alignments ENCSR072VUO ChIP-seq EFO:0002067 K562 cell line Homo sapiens SAFB-human ENCAB180KRZ DNA SDS formaldehyde False 2017-12-01 ENCODE 2 40 ENCFF228GOX, ENCFF807MUK 765767134 ENCODE Processing Pipeline ac937fc250ca3bb1a38e22105dd531ef https://www.encodeproject.org/files/ENCFF164HNV/@@download/ENCFF164HNV.bam hg19 released borderline replicate concordance, low read depth, low read length experiment not submitted to GEO ENCFF908KFH bam alignments ENCSR072VUO ChIP-seq EFO:0002067 K562 cell line Homo sapiens SAFB-human ENCAB180KRZ DNA SDS formaldehyde False 2017-12-01 ENCODE 1 40 ENCFF135WKL, ENCFF807MUK 582824748 ENCODE Processing Pipeline cb818bf8f44ff5ec46015a2325d8d6ee https://www.encodeproject.org/files/ENCFF908KFH/@@download/ENCFF908KFH.bam hg19 released borderline replicate concordance, low read depth, low read length experiment not submitted to GEO ENCFF564MXL bam unfiltered alignments ENCSR072VUO ChIP-seq EFO:0002067 K562 cell line Homo sapiens SAFB-human ENCAB180KRZ DNA SDS formaldehyde False 2017-12-01 ENCODE 1 40 ENCFF135WKL, ENCFF807MUK 846802932 ENCODE Processing Pipeline 8a7fb13774423d78921c605a772b77d3 https://www.encodeproject.org/files/ENCFF564MXL/@@download/ENCFF564MXL.bam hg19 released borderline replicate concordance, low read depth, low read length experiment not submitted to GEO ENCFF508UZH bam unfiltered alignments ENCSR072VUO ChIP-seq EFO:0002067 K562 cell line Homo sapiens SAFB-human ENCAB180KRZ DNA SDS formaldehyde False 2017-12-01 ENCODE 1 40 ENCFF135WKL, ENCFF643CGH 850033865 ENCODE Processing Pipeline beea2069bfcad0fc5cb2ab63b1d90c5c https://www.encodeproject.org/files/ENCFF508UZH/@@download/ENCFF508UZH.bam GRCh38 released borderline replicate concordance, low read depth, low read length experiment not submitted to GEO ENCFF377YBU bam alignments ENCSR072VUO ChIP-seq EFO:0002067 K562 cell line Homo sapiens SAFB-human ENCAB180KRZ DNA SDS formaldehyde False 2017-12-01 ENCODE 1 40 ENCFF135WKL, ENCFF643CGH 582156435 ENCODE Processing Pipeline 4c2e04b243e19e38054eed323595b6a1 https://www.encodeproject.org/files/ENCFF377YBU/@@download/ENCFF377YBU.bam GRCh38 released borderline replicate concordance, low read depth, low read length experiment not submitted to GEO ENCFF112WOA bam unfiltered alignments ENCSR072VUO ChIP-seq EFO:0002067 K562 cell line Homo sapiens SAFB-human ENCAB180KRZ DNA SDS formaldehyde False 2017-12-01 ENCODE 2 40 ENCFF228GOX, ENCFF643CGH 767843875 ENCODE Processing Pipeline f5e52167b443fb1219aa3c64d2042576 https://www.encodeproject.org/files/ENCFF112WOA/@@download/ENCFF112WOA.bam GRCh38 released borderline replicate concordance, low read depth, low read length experiment not submitted to GEO ENCFF751EVN bam alignments ENCSR072VUO ChIP-seq EFO:0002067 K562 cell line Homo sapiens SAFB-human ENCAB180KRZ DNA SDS formaldehyde False 2017-12-01 ENCODE 2 40 ENCFF228GOX, ENCFF643CGH 500794078 ENCODE Processing Pipeline d491b26000e2255e479a14c4f954dcf9 https://www.encodeproject.org/files/ENCFF751EVN/@@download/ENCFF751EVN.bam GRCh38 released borderline replicate concordance, low read depth, low read length experiment not submitted to GEO ENCFF739APB bigWig signal p-value ENCSR072VUO ChIP-seq EFO:0002067 K562 cell line Homo sapiens SAFB-human ENCAB180KRZ DNA SDS formaldehyde False 2017-12-01 ENCODE 2 ENCFF937ONB, ENCFF993VCM 520548522 ENCODE Processing Pipeline 34d79f0746e5f49b04c9a9de023f6d44 https://www.encodeproject.org/files/ENCFF739APB/@@download/ENCFF739APB.bigWig hg19 released borderline replicate concordance, low read depth, low read length experiment not submitted to GEO ENCFF599ZUM bigWig signal p-value ENCSR072VUO ChIP-seq EFO:0002067 K562 cell line Homo sapiens SAFB-human ENCAB180KRZ DNA SDS formaldehyde False 2017-12-01 ENCODE 1, 2 ENCFF177GKX, ENCFF908KFH, ENCFF937ONB, ENCFF993VCM 1035549549 ENCODE Processing Pipeline 8737c02ea89d7903cf371f4eed1bff52 https://www.encodeproject.org/files/ENCFF599ZUM/@@download/ENCFF599ZUM.bigWig hg19 released borderline replicate concordance, low read depth, low read length experiment not submitted to GEO ENCFF415VFS bed narrowPeak peaks ENCSR072VUO ChIP-seq EFO:0002067 K562 cell line Homo sapiens SAFB-human ENCAB180KRZ DNA SDS formaldehyde False 2017-12-01 ENCODE 1 ENCFF177GKX, ENCFF908KFH 5026604 ENCODE Processing Pipeline 8e5f7c10cc85b739677753af635c01be https://www.encodeproject.org/files/ENCFF415VFS/@@download/ENCFF415VFS.bed.gz hg19 released borderline replicate concordance, low read depth, low read length experiment not submitted to GEO ENCFF952MFS bigBed narrowPeak peaks ENCSR072VUO ChIP-seq EFO:0002067 K562 cell line Homo sapiens SAFB-human ENCAB180KRZ DNA SDS formaldehyde False 2017-12-01 ENCODE 1, 2 ENCFF677EHH 13611720 ENCODE Processing Pipeline 2b38e7f040c8bcbf863a9aa823b4cbe6 https://www.encodeproject.org/files/ENCFF952MFS/@@download/ENCFF952MFS.bigBed hg19 released borderline replicate concordance, low read depth, low read length experiment not submitted to GEO ENCFF792LFJ bigBed narrowPeak conservative idr thresholded peaks ENCSR072VUO ChIP-seq EFO:0002067 K562 cell line Homo sapiens SAFB-human ENCAB180KRZ DNA SDS formaldehyde False 2017-12-01 ENCODE 1, 2 ENCFF189QCJ 171115 ENCODE Processing Pipeline fe94c4d6b385bc5c8a59c0f0b01959a0 https://www.encodeproject.org/files/ENCFF792LFJ/@@download/ENCFF792LFJ.bigBed hg19 released borderline replicate concordance, low read depth, low read length experiment not submitted to GEO ENCFF032QDH bigBed narrowPeak peaks ENCSR072VUO ChIP-seq EFO:0002067 K562 cell line Homo sapiens SAFB-human ENCAB180KRZ DNA SDS formaldehyde False 2017-12-01 ENCODE 2 ENCFF297NXF 11069873 ENCODE Processing Pipeline 95714ebbfb35e3cffc2a565d67178b8b https://www.encodeproject.org/files/ENCFF032QDH/@@download/ENCFF032QDH.bigBed hg19 released borderline replicate concordance, low read depth, low read length experiment not submitted to GEO ENCFF189QCJ bed narrowPeak conservative idr thresholded peaks ENCSR072VUO ChIP-seq EFO:0002067 K562 cell line Homo sapiens SAFB-human ENCAB180KRZ DNA SDS formaldehyde False 2017-12-01 ENCODE 1, 2 ENCFF001TDO, ENCFF297NXF, ENCFF415VFS, ENCFF677EHH 71658 ENCODE Processing Pipeline b3cac79687cb5451811966140ed41855 https://www.encodeproject.org/files/ENCFF189QCJ/@@download/ENCFF189QCJ.bed.gz hg19 released borderline replicate concordance, low read depth, low read length experiment not submitted to GEO ENCFF478MPX bed narrowPeak optimal idr thresholded peaks ENCSR072VUO ChIP-seq EFO:0002067 K562 cell line Homo sapiens SAFB-human ENCAB180KRZ DNA SDS formaldehyde False 2017-12-01 ENCODE 1, 2 ENCFF001TDO, ENCFF297NXF, ENCFF415VFS, ENCFF677EHH 103463 ENCODE Processing Pipeline 9fb7ae5d6f5c3136f59945fe5c9a510c https://www.encodeproject.org/files/ENCFF478MPX/@@download/ENCFF478MPX.bed.gz hg19 released borderline replicate concordance, low read depth, low read length experiment not submitted to GEO ENCFF444EXX bigBed narrowPeak optimal idr thresholded peaks ENCSR072VUO ChIP-seq EFO:0002067 K562 cell line Homo sapiens SAFB-human ENCAB180KRZ DNA SDS formaldehyde False 2017-12-01 ENCODE 1, 2 ENCFF478MPX 258629 ENCODE Processing Pipeline 63ba7e218bf654d65b4c7eda1f9cfcff https://www.encodeproject.org/files/ENCFF444EXX/@@download/ENCFF444EXX.bigBed hg19 released borderline replicate concordance, low read depth, low read length experiment not submitted to GEO ENCFF867CUF bigWig fold change over control ENCSR072VUO ChIP-seq EFO:0002067 K562 cell line Homo sapiens SAFB-human ENCAB180KRZ DNA SDS formaldehyde False 2017-12-01 ENCODE 2 ENCFF937ONB, ENCFF993VCM 374769976 ENCODE Processing Pipeline a61bf34d54008b53a3d5366e1532172c https://www.encodeproject.org/files/ENCFF867CUF/@@download/ENCFF867CUF.bigWig hg19 released borderline replicate concordance, low read depth, low read length experiment not submitted to GEO ENCFF163TQK bigWig fold change over control ENCSR072VUO ChIP-seq EFO:0002067 K562 cell line Homo sapiens SAFB-human ENCAB180KRZ DNA SDS formaldehyde False 2017-12-01 ENCODE 1, 2 ENCFF177GKX, ENCFF908KFH, ENCFF937ONB, ENCFF993VCM 863407489 ENCODE Processing Pipeline 6c1a6a4dec4663c88344a4fc25901e1b https://www.encodeproject.org/files/ENCFF163TQK/@@download/ENCFF163TQK.bigWig hg19 released borderline replicate concordance, low read depth, low read length experiment not submitted to GEO ENCFF677EHH bed narrowPeak peaks ENCSR072VUO ChIP-seq EFO:0002067 K562 cell line Homo sapiens SAFB-human ENCAB180KRZ DNA SDS formaldehyde False 2017-12-01 ENCODE 1, 2 ENCFF177GKX, ENCFF908KFH, ENCFF937ONB, ENCFF993VCM 6340399 ENCODE Processing Pipeline c2c8ee0ea76767c46cd9b7309db25e3e https://www.encodeproject.org/files/ENCFF677EHH/@@download/ENCFF677EHH.bed.gz hg19 released borderline replicate concordance, low read depth, low read length experiment not submitted to GEO ENCFF614EIC bigBed narrowPeak peaks ENCSR072VUO ChIP-seq EFO:0002067 K562 cell line Homo sapiens SAFB-human ENCAB180KRZ DNA SDS formaldehyde False 2017-12-01 ENCODE 1 ENCFF415VFS 11139405 ENCODE Processing Pipeline b254f91c3e317e521a84fa0138262ef6 https://www.encodeproject.org/files/ENCFF614EIC/@@download/ENCFF614EIC.bigBed hg19 released borderline replicate concordance, low read depth, low read length experiment not submitted to GEO ENCFF468BOJ bigWig signal p-value ENCSR072VUO ChIP-seq EFO:0002067 K562 cell line Homo sapiens SAFB-human ENCAB180KRZ DNA SDS formaldehyde False 2017-12-01 ENCODE 1 ENCFF177GKX, ENCFF908KFH 576853033 ENCODE Processing Pipeline ff1db34351c32ce0e75c7b0ffecfac95 https://www.encodeproject.org/files/ENCFF468BOJ/@@download/ENCFF468BOJ.bigWig hg19 released borderline replicate concordance, low read depth, low read length experiment not submitted to GEO ENCFF308BWW bigWig fold change over control ENCSR072VUO ChIP-seq EFO:0002067 K562 cell line Homo sapiens SAFB-human ENCAB180KRZ DNA SDS formaldehyde False 2017-12-01 ENCODE 1 ENCFF177GKX, ENCFF908KFH 393227008 ENCODE Processing Pipeline a50a113853d45794f0d74134f8a0abaa https://www.encodeproject.org/files/ENCFF308BWW/@@download/ENCFF308BWW.bigWig hg19 released borderline replicate concordance, low read depth, low read length experiment not submitted to GEO ENCFF297NXF bed narrowPeak peaks ENCSR072VUO ChIP-seq EFO:0002067 K562 cell line Homo sapiens SAFB-human ENCAB180KRZ DNA SDS formaldehyde False 2017-12-01 ENCODE 2 ENCFF937ONB, ENCFF993VCM 5119955 ENCODE Processing Pipeline 44598347b1ae405daae52bef3344bd9b https://www.encodeproject.org/files/ENCFF297NXF/@@download/ENCFF297NXF.bed.gz hg19 released borderline replicate concordance, low read depth, low read length experiment not submitted to GEO ENCFF433PJA bigWig signal p-value ENCSR072VUO ChIP-seq EFO:0002067 K562 cell line Homo sapiens SAFB-human ENCAB180KRZ DNA SDS formaldehyde False 2017-12-01 ENCODE 1 ENCFF092OLM, ENCFF377YBU 599337529 ENCODE Processing Pipeline adb3786fa58fc6a9d97ff5ac0c53a74a https://www.encodeproject.org/files/ENCFF433PJA/@@download/ENCFF433PJA.bigWig GRCh38 released borderline replicate concordance, low read depth, low read length experiment not submitted to GEO ENCFF840ICU bigWig signal p-value ENCSR072VUO ChIP-seq EFO:0002067 K562 cell line Homo sapiens SAFB-human ENCAB180KRZ DNA SDS formaldehyde False 2017-12-01 ENCODE 2 ENCFF584ERB, ENCFF751EVN 592450510 ENCODE Processing Pipeline b3d16bec580ae0b1079182ef517f5a8f https://www.encodeproject.org/files/ENCFF840ICU/@@download/ENCFF840ICU.bigWig GRCh38 released borderline replicate concordance, low read depth, low read length experiment not submitted to GEO ENCFF088FWS bigWig signal p-value ENCSR072VUO ChIP-seq EFO:0002067 K562 cell line Homo sapiens SAFB-human ENCAB180KRZ DNA SDS formaldehyde False 2017-12-01 ENCODE 1, 2 ENCFF092OLM, ENCFF377YBU, ENCFF584ERB, ENCFF751EVN 950598518 ENCODE Processing Pipeline 66efc92aa331a7d12c5e15d8899c1c1f https://www.encodeproject.org/files/ENCFF088FWS/@@download/ENCFF088FWS.bigWig GRCh38 released borderline replicate concordance, low read depth, low read length experiment not submitted to GEO ENCFF752EXU bigWig fold change over control ENCSR072VUO ChIP-seq EFO:0002067 K562 cell line Homo sapiens SAFB-human ENCAB180KRZ DNA SDS formaldehyde False 2017-12-01 ENCODE 1 ENCFF092OLM, ENCFF377YBU 394081207 ENCODE Processing Pipeline 4b1ff845d4897676214e3fbc4ebc2612 https://www.encodeproject.org/files/ENCFF752EXU/@@download/ENCFF752EXU.bigWig GRCh38 released borderline replicate concordance, low read depth, low read length experiment not submitted to GEO ENCFF697GOT bigWig fold change over control ENCSR072VUO ChIP-seq EFO:0002067 K562 cell line Homo sapiens SAFB-human ENCAB180KRZ DNA SDS formaldehyde False 2017-12-01 ENCODE 2 ENCFF584ERB, ENCFF751EVN 373869725 ENCODE Processing Pipeline 51690341f7988485525e1bb58b090f1e https://www.encodeproject.org/files/ENCFF697GOT/@@download/ENCFF697GOT.bigWig GRCh38 released borderline replicate concordance, low read depth, low read length experiment not submitted to GEO ENCFF711WLJ bigWig fold change over control ENCSR072VUO ChIP-seq EFO:0002067 K562 cell line Homo sapiens SAFB-human ENCAB180KRZ DNA SDS formaldehyde False 2017-12-01 ENCODE 1, 2 ENCFF092OLM, ENCFF377YBU, ENCFF584ERB, ENCFF751EVN 863002958 ENCODE Processing Pipeline 6a00a01d521bec2c5860b6df4e5a06d6 https://www.encodeproject.org/files/ENCFF711WLJ/@@download/ENCFF711WLJ.bigWig GRCh38 released borderline replicate concordance, low read depth, low read length experiment not submitted to GEO ENCFF328WUR bed narrowPeak peaks ENCSR072VUO ChIP-seq EFO:0002067 K562 cell line Homo sapiens SAFB-human ENCAB180KRZ DNA SDS formaldehyde False 2017-12-01 ENCODE 1 ENCFF092OLM, ENCFF377YBU 5059318 ENCODE Processing Pipeline 1ffbe2050736c87f3595b2d53606de3f https://www.encodeproject.org/files/ENCFF328WUR/@@download/ENCFF328WUR.bed.gz GRCh38 released borderline replicate concordance, low read depth, low read length experiment not submitted to GEO ENCFF157CME bed narrowPeak peaks ENCSR072VUO ChIP-seq EFO:0002067 K562 cell line Homo sapiens SAFB-human ENCAB180KRZ DNA SDS formaldehyde False 2017-12-01 ENCODE 2 ENCFF584ERB, ENCFF751EVN 5086051 ENCODE Processing Pipeline fad4b4a343be89fba548bfe49987a5e8 https://www.encodeproject.org/files/ENCFF157CME/@@download/ENCFF157CME.bed.gz GRCh38 released borderline replicate concordance, low read depth, low read length experiment not submitted to GEO ENCFF428NSD bed narrowPeak peaks ENCSR072VUO ChIP-seq EFO:0002067 K562 cell line Homo sapiens SAFB-human ENCAB180KRZ DNA SDS formaldehyde False 2017-12-01 ENCODE 1, 2 ENCFF092OLM, ENCFF377YBU, ENCFF584ERB, ENCFF751EVN 6297167 ENCODE Processing Pipeline 7f8df9ed1a335ff40f5e48668bd069c2 https://www.encodeproject.org/files/ENCFF428NSD/@@download/ENCFF428NSD.bed.gz GRCh38 released borderline replicate concordance, low read depth, low read length experiment not submitted to GEO ENCFF592JAD bigBed narrowPeak peaks ENCSR072VUO ChIP-seq EFO:0002067 K562 cell line Homo sapiens SAFB-human ENCAB180KRZ DNA SDS formaldehyde False 2017-12-01 ENCODE 1 ENCFF328WUR 11154532 ENCODE Processing Pipeline 4c3d7f2753aae1069b715a9cd66420bd https://www.encodeproject.org/files/ENCFF592JAD/@@download/ENCFF592JAD.bigBed GRCh38 released borderline replicate concordance, low read depth, low read length experiment not submitted to GEO ENCFF361RLX bigBed narrowPeak peaks ENCSR072VUO ChIP-seq EFO:0002067 K562 cell line Homo sapiens SAFB-human ENCAB180KRZ DNA SDS formaldehyde False 2017-12-01 ENCODE 2 ENCFF157CME 11083829 ENCODE Processing Pipeline c37692ac1d0b909d16a25e20895b691d https://www.encodeproject.org/files/ENCFF361RLX/@@download/ENCFF361RLX.bigBed GRCh38 released borderline replicate concordance, low read depth, low read length experiment not submitted to GEO ENCFF454SGO bigBed narrowPeak peaks ENCSR072VUO ChIP-seq EFO:0002067 K562 cell line Homo sapiens SAFB-human ENCAB180KRZ DNA SDS formaldehyde False 2017-12-01 ENCODE 1, 2 ENCFF428NSD 13618797 ENCODE Processing Pipeline 866c2090758ea0ab1a2a6b4c7d841fb2 https://www.encodeproject.org/files/ENCFF454SGO/@@download/ENCFF454SGO.bigBed GRCh38 released borderline replicate concordance, low read depth, low read length experiment not submitted to GEO ENCFF063ZIT bed narrowPeak conservative idr thresholded peaks ENCSR072VUO ChIP-seq EFO:0002067 K562 cell line Homo sapiens SAFB-human ENCAB180KRZ DNA SDS formaldehyde False 2017-12-01 ENCODE 1, 2 ENCFF157CME, ENCFF328WUR, ENCFF419RSJ, ENCFF428NSD 70889 ENCODE Processing Pipeline 1959122447667cfd24e56d24dc1ef65c https://www.encodeproject.org/files/ENCFF063ZIT/@@download/ENCFF063ZIT.bed.gz GRCh38 released borderline replicate concordance, low read depth, low read length experiment not submitted to GEO ENCFF767JNB bigBed narrowPeak conservative idr thresholded peaks ENCSR072VUO ChIP-seq EFO:0002067 K562 cell line Homo sapiens SAFB-human ENCAB180KRZ DNA SDS formaldehyde False 2017-12-01 ENCODE 1, 2 ENCFF063ZIT 171434 ENCODE Processing Pipeline 2006143e76c7ab0c14d683ac9b67c23d https://www.encodeproject.org/files/ENCFF767JNB/@@download/ENCFF767JNB.bigBed GRCh38 released borderline replicate concordance, low read depth, low read length experiment not submitted to GEO ENCFF411YVY bed narrowPeak optimal idr thresholded peaks ENCSR072VUO ChIP-seq EFO:0002067 K562 cell line Homo sapiens SAFB-human ENCAB180KRZ DNA SDS formaldehyde False 2017-12-01 ENCODE 1, 2 ENCFF157CME, ENCFF328WUR, ENCFF419RSJ, ENCFF428NSD 103479 ENCODE Processing Pipeline 6515f239fea878af719b52d4479c71f1 https://www.encodeproject.org/files/ENCFF411YVY/@@download/ENCFF411YVY.bed.gz GRCh38 released borderline replicate concordance, low read depth, low read length experiment not submitted to GEO ENCFF916WYW bigBed narrowPeak optimal idr thresholded peaks ENCSR072VUO ChIP-seq EFO:0002067 K562 cell line Homo sapiens SAFB-human ENCAB180KRZ DNA SDS formaldehyde False 2017-12-01 ENCODE 1, 2 ENCFF411YVY 259259 ENCODE Processing Pipeline d2fe6cbce08794d147c9ae1c6dcbf860 https://www.encodeproject.org/files/ENCFF916WYW/@@download/ENCFF916WYW.bigBed GRCh38 released borderline replicate concordance, low read depth, low read length experiment not submitted to GEO ENCFF342ZEM bam unfiltered alignments ENCSR953DVM ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F8-human ENCAB224FFQ DNA False 2018-01-26 ENCODE 2 100 ENCFF778OSN, ENCFF807MUK, ENCFF839XCL 5513957931 ENCODE Processing Pipeline 451d9aa687a04b521653c9382b2379c2 https://www.encodeproject.org/files/ENCFF342ZEM/@@download/ENCFF342ZEM.bam hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF683GQF bam unfiltered alignments ENCSR953DVM ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F8-human ENCAB224FFQ DNA False 2018-01-26 ENCODE 1 100 ENCFF365NLR, ENCFF467AXX, ENCFF807MUK 3919331441 ENCODE Processing Pipeline c896d1d65ca3d54f687e9a87afc5cb24 https://www.encodeproject.org/files/ENCFF683GQF/@@download/ENCFF683GQF.bam hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF778OSN fastq reads ENCSR953DVM ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F8-human ENCAB224FFQ DNA False 2018-01-26 ENCODE 2 1 100 paired-ended 1 ENCFF839XCL 2584438597 Michael Snyder, Stanford 226487bb80f2970c9ccefb903ce777da https://www.encodeproject.org/files/ENCFF778OSN/@@download/ENCFF778OSN.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFD/ released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF365NLR fastq reads ENCSR953DVM ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F8-human ENCAB224FFQ DNA False 2018-01-26 ENCODE 1 1 100 paired-ended 1 ENCFF467AXX 1791927726 Michael Snyder, Stanford ff68a9429832f530606d9f54b0fd25e9 https://www.encodeproject.org/files/ENCFF365NLR/@@download/ENCFF365NLR.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFF/ released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF839XCL fastq reads ENCSR953DVM ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F8-human ENCAB224FFQ DNA False 2018-01-26 ENCODE 2 1 100 paired-ended 2 ENCFF778OSN 2579180783 Michael Snyder, Stanford c58f060bf75352d2d3329848622a1d6f https://www.encodeproject.org/files/ENCFF839XCL/@@download/ENCFF839XCL.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFA/ released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF467AXX fastq reads ENCSR953DVM ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F8-human ENCAB224FFQ DNA False 2018-01-26 ENCODE 1 1 100 paired-ended 2 ENCFF365NLR 1830702410 Michael Snyder, Stanford 2b2b938b8f9d6298dd8495196630d11f https://www.encodeproject.org/files/ENCFF467AXX/@@download/ENCFF467AXX.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFH/ released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF019NMV bam alignments ENCSR953DVM ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F8-human ENCAB224FFQ DNA False 2018-01-26 ENCODE 1 100 ENCFF365NLR, ENCFF467AXX, ENCFF807MUK 3187410712 ENCODE Processing Pipeline 9dbc98e34ccaf4cbeda6170c4ebc6a6d https://www.encodeproject.org/files/ENCFF019NMV/@@download/ENCFF019NMV.bam hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF534OTQ bam alignments ENCSR953DVM ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F8-human ENCAB224FFQ DNA False 2018-01-26 ENCODE 2 100 ENCFF778OSN, ENCFF807MUK, ENCFF839XCL 4309000571 ENCODE Processing Pipeline bf6bfeb397e075b574b319a076657f91 https://www.encodeproject.org/files/ENCFF534OTQ/@@download/ENCFF534OTQ.bam hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF638UXS bigWig signal p-value ENCSR953DVM ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F8-human ENCAB224FFQ DNA False 2018-01-26 ENCODE 1 ENCFF019NMV, ENCFF581ZJL 1043229163 ENCODE Processing Pipeline 1be3eacca503a5bc0ee3bb978f39be7f https://www.encodeproject.org/files/ENCFF638UXS/@@download/ENCFF638UXS.bigWig hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF360VXM bigWig signal p-value ENCSR953DVM ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F8-human ENCAB224FFQ DNA False 2018-01-26 ENCODE 2 ENCFF051LWI, ENCFF534OTQ 974285466 ENCODE Processing Pipeline 163b5e91b5ccfc6db30ac8714dfebc28 https://www.encodeproject.org/files/ENCFF360VXM/@@download/ENCFF360VXM.bigWig hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF567AHN bigWig fold change over control ENCSR953DVM ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F8-human ENCAB224FFQ DNA False 2018-01-26 ENCODE 1 ENCFF019NMV, ENCFF581ZJL 1037717396 ENCODE Processing Pipeline c1eac8b22f2c316a1ac675e0ea192118 https://www.encodeproject.org/files/ENCFF567AHN/@@download/ENCFF567AHN.bigWig hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF173DED bigWig signal p-value ENCSR953DVM ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F8-human ENCAB224FFQ DNA False 2018-01-26 ENCODE 1, 2 ENCFF019NMV, ENCFF051LWI, ENCFF534OTQ, ENCFF581ZJL 1755482153 ENCODE Processing Pipeline 28a514e63e0169e7a2b9add06a44ad00 https://www.encodeproject.org/files/ENCFF173DED/@@download/ENCFF173DED.bigWig hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF058POD bigWig fold change over control ENCSR953DVM ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F8-human ENCAB224FFQ DNA False 2018-01-26 ENCODE 2 ENCFF051LWI, ENCFF534OTQ 1106235906 ENCODE Processing Pipeline 0477208635e8231a2a56a86b7539b56b https://www.encodeproject.org/files/ENCFF058POD/@@download/ENCFF058POD.bigWig hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF092WDH bigWig fold change over control ENCSR953DVM ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F8-human ENCAB224FFQ DNA False 2018-01-26 ENCODE 1, 2 ENCFF019NMV, ENCFF051LWI, ENCFF534OTQ, ENCFF581ZJL 1994724545 ENCODE Processing Pipeline 00e150f230581c40f43f0e9707c19925 https://www.encodeproject.org/files/ENCFF092WDH/@@download/ENCFF092WDH.bigWig hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF904YUH bed narrowPeak peaks ENCSR953DVM ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F8-human ENCAB224FFQ DNA False 2018-01-26 ENCODE 2 ENCFF051LWI, ENCFF534OTQ 6830870 ENCODE Processing Pipeline 6d5890f88e3ef7e3c6dc6be88c11c67e https://www.encodeproject.org/files/ENCFF904YUH/@@download/ENCFF904YUH.bed.gz hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF133EYO bed narrowPeak peaks ENCSR953DVM ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F8-human ENCAB224FFQ DNA False 2018-01-26 ENCODE 1 ENCFF019NMV, ENCFF581ZJL 6905870 ENCODE Processing Pipeline 593a7b157fdd9fe7c6683d3eb14892e2 https://www.encodeproject.org/files/ENCFF133EYO/@@download/ENCFF133EYO.bed.gz hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF696BJA bed narrowPeak peaks ENCSR953DVM ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F8-human ENCAB224FFQ DNA False 2018-01-26 ENCODE 1, 2 ENCFF019NMV, ENCFF051LWI, ENCFF534OTQ, ENCFF581ZJL 7168536 ENCODE Processing Pipeline 52b97caf9cbb78cdb0d7fdba098bd89c https://www.encodeproject.org/files/ENCFF696BJA/@@download/ENCFF696BJA.bed.gz hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF455EBE bigBed narrowPeak peaks ENCSR953DVM ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F8-human ENCAB224FFQ DNA False 2018-01-26 ENCODE 1 ENCFF133EYO 13000608 ENCODE Processing Pipeline 9bdf7db06d5518ca8ded7f6ffb6b7392 https://www.encodeproject.org/files/ENCFF455EBE/@@download/ENCFF455EBE.bigBed hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF314SYK bigBed narrowPeak peaks ENCSR953DVM ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F8-human ENCAB224FFQ DNA False 2018-01-26 ENCODE 2 ENCFF904YUH 13154188 ENCODE Processing Pipeline 79af54551c34fdd10deee57ee6e68cc0 https://www.encodeproject.org/files/ENCFF314SYK/@@download/ENCFF314SYK.bigBed hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF267SLP bigBed narrowPeak peaks ENCSR953DVM ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F8-human ENCAB224FFQ DNA False 2018-01-26 ENCODE 1, 2 ENCFF696BJA 12742000 ENCODE Processing Pipeline d4a8864124623c74717e08faf6b82674 https://www.encodeproject.org/files/ENCFF267SLP/@@download/ENCFF267SLP.bigBed hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF953GCB bam unfiltered alignments ENCSR953DVM ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F8-human ENCAB224FFQ DNA False 2018-01-26 ENCODE 1 100 ENCFF365NLR, ENCFF467AXX, ENCFF643CGH 3922274008 ENCODE Processing Pipeline c314cbb4c798d9e08751933e2e21d8c4 https://www.encodeproject.org/files/ENCFF953GCB/@@download/ENCFF953GCB.bam GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF034WKA bam unfiltered alignments ENCSR953DVM ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F8-human ENCAB224FFQ DNA False 2018-01-26 ENCODE 2 100 ENCFF643CGH, ENCFF778OSN, ENCFF839XCL 5518282520 ENCODE Processing Pipeline 16186a99abb660714d20710295dfdefd https://www.encodeproject.org/files/ENCFF034WKA/@@download/ENCFF034WKA.bam GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF589IBH bam alignments ENCSR953DVM ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F8-human ENCAB224FFQ DNA False 2018-01-26 ENCODE 1 100 ENCFF365NLR, ENCFF467AXX, ENCFF643CGH 3189099028 ENCODE Processing Pipeline c27a1b8845a06f204df59b688087cf1a https://www.encodeproject.org/files/ENCFF589IBH/@@download/ENCFF589IBH.bam GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF514FRG bam alignments ENCSR953DVM ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F8-human ENCAB224FFQ DNA False 2018-01-26 ENCODE 2 100 ENCFF643CGH, ENCFF778OSN, ENCFF839XCL 4310261140 ENCODE Processing Pipeline 82c301fc09270d64843d400ad1239efa https://www.encodeproject.org/files/ENCFF514FRG/@@download/ENCFF514FRG.bam GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF250DJH bigWig signal p-value ENCSR953DVM ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F8-human ENCAB224FFQ DNA False 2018-01-26 ENCODE 1 ENCFF589IBH, ENCFF910IKB 1146427661 ENCODE Processing Pipeline 3a408991f085ea02e6f629124e983882 https://www.encodeproject.org/files/ENCFF250DJH/@@download/ENCFF250DJH.bigWig GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF697GKI bigWig signal p-value ENCSR953DVM ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F8-human ENCAB224FFQ DNA False 2018-01-26 ENCODE 2 ENCFF227IZS, ENCFF514FRG 1120334128 ENCODE Processing Pipeline 6e5b1efa7ef31cebbda3d77b10edf233 https://www.encodeproject.org/files/ENCFF697GKI/@@download/ENCFF697GKI.bigWig GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF009GXA bigWig signal p-value ENCSR953DVM ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F8-human ENCAB224FFQ DNA False 2018-01-26 ENCODE 1, 2 ENCFF227IZS, ENCFF514FRG, ENCFF589IBH, ENCFF910IKB 1755562541 ENCODE Processing Pipeline 0f582a4b6055e83d62407cd9c0a65fe5 https://www.encodeproject.org/files/ENCFF009GXA/@@download/ENCFF009GXA.bigWig GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF887PXB bigWig fold change over control ENCSR953DVM ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F8-human ENCAB224FFQ DNA False 2018-01-26 ENCODE 1 ENCFF589IBH, ENCFF910IKB 1033853711 ENCODE Processing Pipeline fc5436ecdec2fa9ee31a1163f42464ff https://www.encodeproject.org/files/ENCFF887PXB/@@download/ENCFF887PXB.bigWig GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF298KPW bigWig fold change over control ENCSR953DVM ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F8-human ENCAB224FFQ DNA False 2018-01-26 ENCODE 2 ENCFF227IZS, ENCFF514FRG 1106479341 ENCODE Processing Pipeline dde5d84a0a920cc25bb1a358150e4d07 https://www.encodeproject.org/files/ENCFF298KPW/@@download/ENCFF298KPW.bigWig GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF690TMV bigWig fold change over control ENCSR953DVM ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F8-human ENCAB224FFQ DNA False 2018-01-26 ENCODE 1, 2 ENCFF227IZS, ENCFF514FRG, ENCFF589IBH, ENCFF910IKB 1993182317 ENCODE Processing Pipeline 1cba01a40f58f0aaf1b1f68b89a6dcf2 https://www.encodeproject.org/files/ENCFF690TMV/@@download/ENCFF690TMV.bigWig GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF177KFF bed narrowPeak peaks ENCSR953DVM ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F8-human ENCAB224FFQ DNA False 2018-01-26 ENCODE 1 ENCFF589IBH, ENCFF910IKB 6814523 ENCODE Processing Pipeline c7dbcfc724f6af6561f2fdde66b02ff7 https://www.encodeproject.org/files/ENCFF177KFF/@@download/ENCFF177KFF.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF094YJF bed narrowPeak peaks ENCSR953DVM ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F8-human ENCAB224FFQ DNA False 2018-01-26 ENCODE 2 ENCFF227IZS, ENCFF514FRG 6736637 ENCODE Processing Pipeline 516e557d7e6fd9f3fcb4c5ac01cd861b https://www.encodeproject.org/files/ENCFF094YJF/@@download/ENCFF094YJF.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF389AUY bed narrowPeak peaks ENCSR953DVM ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F8-human ENCAB224FFQ DNA False 2018-01-26 ENCODE 1, 2 ENCFF227IZS, ENCFF514FRG, ENCFF589IBH, ENCFF910IKB 7231205 ENCODE Processing Pipeline 511a3ebe1e5f35a0dc18b0edde663351 https://www.encodeproject.org/files/ENCFF389AUY/@@download/ENCFF389AUY.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF616YZS bigBed narrowPeak peaks ENCSR953DVM ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F8-human ENCAB224FFQ DNA False 2018-01-26 ENCODE 1 ENCFF177KFF 13010446 ENCODE Processing Pipeline 699111d2a02f71709c8826cffe86cf85 https://www.encodeproject.org/files/ENCFF616YZS/@@download/ENCFF616YZS.bigBed GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF684XKZ bigBed narrowPeak peaks ENCSR953DVM ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F8-human ENCAB224FFQ DNA False 2018-01-26 ENCODE 2 ENCFF094YJF 13152092 ENCODE Processing Pipeline edfc6fdfaa9bea1a32c979b3900cf46a https://www.encodeproject.org/files/ENCFF684XKZ/@@download/ENCFF684XKZ.bigBed GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF857RSM bigBed narrowPeak peaks ENCSR953DVM ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F8-human ENCAB224FFQ DNA False 2018-01-26 ENCODE 1, 2 ENCFF389AUY 12824893 ENCODE Processing Pipeline 61c1645784881fc2b937bd443c343deb https://www.encodeproject.org/files/ENCFF857RSM/@@download/ENCFF857RSM.bigBed GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF008DYZ bed narrowPeak conservative idr thresholded peaks ENCSR953DVM ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F8-human ENCAB224FFQ DNA False 2018-01-26 ENCODE 1, 2 ENCFF094YJF, ENCFF177KFF, ENCFF389AUY, ENCFF419RSJ 186045 ENCODE Processing Pipeline d933fc53fe424e90df9e400c0ed1adc4 https://www.encodeproject.org/files/ENCFF008DYZ/@@download/ENCFF008DYZ.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF723YBP bigBed narrowPeak conservative idr thresholded peaks ENCSR953DVM ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F8-human ENCAB224FFQ DNA False 2018-01-26 ENCODE 1, 2 ENCFF008DYZ 455726 ENCODE Processing Pipeline 939ea660f1d39a79019ff7d05c66f3bb https://www.encodeproject.org/files/ENCFF723YBP/@@download/ENCFF723YBP.bigBed GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF171WWF bed narrowPeak optimal idr thresholded peaks ENCSR953DVM ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F8-human ENCAB224FFQ DNA False 2018-01-26 ENCODE 1, 2 ENCFF094YJF, ENCFF177KFF, ENCFF389AUY, ENCFF419RSJ 237876 ENCODE Processing Pipeline 6ba2a09f16d1dc921809d48f0d085edd https://www.encodeproject.org/files/ENCFF171WWF/@@download/ENCFF171WWF.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF316AYA bigBed narrowPeak optimal idr thresholded peaks ENCSR953DVM ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F8-human ENCAB224FFQ DNA False 2018-01-26 ENCODE 1, 2 ENCFF171WWF 542770 ENCODE Processing Pipeline 727b8c5d40c4840fada167b182701d6d https://www.encodeproject.org/files/ENCFF316AYA/@@download/ENCFF316AYA.bigBed GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF749OIM bed narrowPeak conservative idr thresholded peaks ENCSR953DVM ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F8-human ENCAB224FFQ DNA False 2018-01-26 ENCODE 1, 2 ENCFF001TDO, ENCFF133EYO, ENCFF696BJA, ENCFF904YUH 153517 ENCODE Processing Pipeline 1f88b53e6adef05457ef6e27111ab839 https://www.encodeproject.org/files/ENCFF749OIM/@@download/ENCFF749OIM.bed.gz hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF925DJG bed narrowPeak optimal idr thresholded peaks ENCSR953DVM ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F8-human ENCAB224FFQ DNA False 2018-01-26 ENCODE 1, 2 ENCFF001TDO, ENCFF133EYO, ENCFF696BJA, ENCFF904YUH 199330 ENCODE Processing Pipeline a54bfc70ca37fae47890b441013320dd https://www.encodeproject.org/files/ENCFF925DJG/@@download/ENCFF925DJG.bed.gz hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF799TTD bigBed narrowPeak optimal idr thresholded peaks ENCSR953DVM ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F8-human ENCAB224FFQ DNA False 2018-01-26 ENCODE 1, 2 ENCFF925DJG 393161 ENCODE Processing Pipeline 79549d9988d96bb109cec3759e34dc42 https://www.encodeproject.org/files/ENCFF799TTD/@@download/ENCFF799TTD.bigBed hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF809XKT bigBed narrowPeak conservative idr thresholded peaks ENCSR953DVM ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F8-human ENCAB224FFQ DNA False 2018-01-26 ENCODE 1, 2 ENCFF749OIM 331951 ENCODE Processing Pipeline 4dd28fa9de34eab7875965e526a74e5f https://www.encodeproject.org/files/ENCFF809XKT/@@download/ENCFF809XKT.bigBed hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF761DFV bam unfiltered alignments ENCSR675LRO ChIP-seq EFO:0002067 K562 cell line Homo sapiens MLLT1-human ENCAB649WEQ DNA False 2016-06-14 ENCODE 2 100 ENCFF050YVZ, ENCFF745PCH, ENCFF807MUK 5153661707 ENCODE Processing Pipeline 44f6f27f97db4f9a905c4b107b66f6b8 https://www.encodeproject.org/files/ENCFF761DFV/@@download/ENCFF761DFV.bam hg19 released ENCFF638TEL bam unfiltered alignments ENCSR675LRO ChIP-seq EFO:0002067 K562 cell line Homo sapiens MLLT1-human ENCAB649WEQ DNA False 2016-06-14 ENCODE 1 100 ENCFF299YIC, ENCFF807MUK, ENCFF826AKY 5487959242 ENCODE Processing Pipeline 49a0a8d5ca85e8ccf095f595bbeb8b3c https://www.encodeproject.org/files/ENCFF638TEL/@@download/ENCFF638TEL.bam hg19 released ENCFF745PCH fastq reads ENCSR675LRO ChIP-seq EFO:0002067 K562 cell line Homo sapiens MLLT1-human ENCAB649WEQ DNA False 2016-06-14 ENCODE 2 1 100 paired-ended 1 ENCFF050YVZ 2326621988 Michael Snyder, Stanford 213b2563ea594f3e6a16bd2005c7ad27 SRA:SRR5111946 https://www.encodeproject.org/files/ENCFF745PCH/@@download/ENCFF745PCH.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFD/ released ENCFF050YVZ fastq reads ENCSR675LRO ChIP-seq EFO:0002067 K562 cell line Homo sapiens MLLT1-human ENCAB649WEQ DNA False 2016-06-14 ENCODE 2 1 100 paired-ended 2 ENCFF745PCH 2397635314 Michael Snyder, Stanford be30dbb05f0b197f11b09a2e4aca5348 SRA:SRR5111946 https://www.encodeproject.org/files/ENCFF050YVZ/@@download/ENCFF050YVZ.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFA/ released ENCFF826AKY fastq reads ENCSR675LRO ChIP-seq EFO:0002067 K562 cell line Homo sapiens MLLT1-human ENCAB649WEQ DNA False 2016-06-14 ENCODE 1 1 100 paired-ended 1 ENCFF299YIC 2503721600 Michael Snyder, Stanford b21ce9b5390cfdce1be30bd5210f55cb SRA:SRR5111945 https://www.encodeproject.org/files/ENCFF826AKY/@@download/ENCFF826AKY.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFF/ released ENCFF299YIC fastq reads ENCSR675LRO ChIP-seq EFO:0002067 K562 cell line Homo sapiens MLLT1-human ENCAB649WEQ DNA False 2016-06-14 ENCODE 1 1 100 paired-ended 2 ENCFF826AKY 2505582335 Michael Snyder, Stanford 7861f6ac8ea5b4b9d5cf32432c373218 SRA:SRR5111945 https://www.encodeproject.org/files/ENCFF299YIC/@@download/ENCFF299YIC.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFH/ released ENCFF821TOA bam alignments ENCSR675LRO ChIP-seq EFO:0002067 K562 cell line Homo sapiens MLLT1-human ENCAB649WEQ DNA False 2016-06-14 ENCODE 1 100 ENCFF299YIC, ENCFF807MUK, ENCFF826AKY 4668356811 ENCODE Processing Pipeline af336ce98d50e63c2e4553c66dd67dbb https://www.encodeproject.org/files/ENCFF821TOA/@@download/ENCFF821TOA.bam hg19 released ENCFF471WLV bam alignments ENCSR675LRO ChIP-seq EFO:0002067 K562 cell line Homo sapiens MLLT1-human ENCAB649WEQ DNA False 2016-06-14 ENCODE 2 100 ENCFF050YVZ, ENCFF745PCH, ENCFF807MUK 4425767161 ENCODE Processing Pipeline 993c784837eb80a417ff745f52273365 https://www.encodeproject.org/files/ENCFF471WLV/@@download/ENCFF471WLV.bam hg19 released ENCFF084FTC bam unfiltered alignments ENCSR675LRO ChIP-seq EFO:0002067 K562 cell line Homo sapiens MLLT1-human ENCAB649WEQ DNA False 2016-06-14 ENCODE 2 100 ENCFF050YVZ, ENCFF643CGH, ENCFF745PCH 5159630980 ENCODE Processing Pipeline 707ec16a61a577aa723272b01caf772e https://www.encodeproject.org/files/ENCFF084FTC/@@download/ENCFF084FTC.bam GRCh38 released ENCFF701CLT bam unfiltered alignments ENCSR675LRO ChIP-seq EFO:0002067 K562 cell line Homo sapiens MLLT1-human ENCAB649WEQ DNA False 2016-06-14 ENCODE 1 100 ENCFF299YIC, ENCFF643CGH, ENCFF826AKY 5494517150 ENCODE Processing Pipeline ac92a75bd2d218526c18781bd159e2d5 https://www.encodeproject.org/files/ENCFF701CLT/@@download/ENCFF701CLT.bam GRCh38 released ENCFF353XMB bam alignments ENCSR675LRO ChIP-seq EFO:0002067 K562 cell line Homo sapiens MLLT1-human ENCAB649WEQ DNA False 2016-06-14 ENCODE 2 100 ENCFF050YVZ, ENCFF643CGH, ENCFF745PCH 4429112291 ENCODE Processing Pipeline d326b7cfc0f280aa784cc5a4c33475a1 https://www.encodeproject.org/files/ENCFF353XMB/@@download/ENCFF353XMB.bam GRCh38 released ENCFF131XTL bam alignments ENCSR675LRO ChIP-seq EFO:0002067 K562 cell line Homo sapiens MLLT1-human ENCAB649WEQ DNA False 2016-06-14 ENCODE 1 100 ENCFF299YIC, ENCFF643CGH, ENCFF826AKY 4671454365 ENCODE Processing Pipeline ff83322aeb0648940a5eaca5be32601b https://www.encodeproject.org/files/ENCFF131XTL/@@download/ENCFF131XTL.bam GRCh38 released ENCFF748WVZ bigWig signal p-value ENCSR675LRO ChIP-seq EFO:0002067 K562 cell line Homo sapiens MLLT1-human ENCAB649WEQ DNA False 2016-06-14 ENCODE 1 ENCFF131XTL, ENCFF910IKB 1039488916 ENCODE Processing Pipeline 2d109aafb6922f6eff7166e8e200b9b5 https://www.encodeproject.org/files/ENCFF748WVZ/@@download/ENCFF748WVZ.bigWig GRCh38 released ENCFF601KCA bigWig signal p-value ENCSR675LRO ChIP-seq EFO:0002067 K562 cell line Homo sapiens MLLT1-human ENCAB649WEQ DNA False 2016-06-14 ENCODE 2 ENCFF227IZS, ENCFF353XMB 1026865476 ENCODE Processing Pipeline e55df03051217cb2bd81f4977f4aabfb https://www.encodeproject.org/files/ENCFF601KCA/@@download/ENCFF601KCA.bigWig GRCh38 released ENCFF994IMQ bigWig signal p-value ENCSR675LRO ChIP-seq EFO:0002067 K562 cell line Homo sapiens MLLT1-human ENCAB649WEQ DNA False 2016-06-14 ENCODE 1, 2 ENCFF131XTL, ENCFF227IZS, ENCFF353XMB, ENCFF910IKB 2166424721 ENCODE Processing Pipeline 0043ceefe78eda240e7ace6a8304d388 https://www.encodeproject.org/files/ENCFF994IMQ/@@download/ENCFF994IMQ.bigWig GRCh38 released ENCFF600TLE bigWig fold change over control ENCSR675LRO ChIP-seq EFO:0002067 K562 cell line Homo sapiens MLLT1-human ENCAB649WEQ DNA False 2016-06-14 ENCODE 1 ENCFF131XTL, ENCFF910IKB 1251199621 ENCODE Processing Pipeline 6d6219591eb70d1d37541535b11c71ed https://www.encodeproject.org/files/ENCFF600TLE/@@download/ENCFF600TLE.bigWig GRCh38 released ENCFF703TSA bigWig fold change over control ENCSR675LRO ChIP-seq EFO:0002067 K562 cell line Homo sapiens MLLT1-human ENCAB649WEQ DNA False 2016-06-14 ENCODE 2 ENCFF227IZS, ENCFF353XMB 1156687160 ENCODE Processing Pipeline 4201fb1abc3a9400eecd51c5a64340cd https://www.encodeproject.org/files/ENCFF703TSA/@@download/ENCFF703TSA.bigWig GRCh38 released ENCFF837HCK bigWig fold change over control ENCSR675LRO ChIP-seq EFO:0002067 K562 cell line Homo sapiens MLLT1-human ENCAB649WEQ DNA False 2016-06-14 ENCODE 1, 2 ENCFF131XTL, ENCFF227IZS, ENCFF353XMB, ENCFF910IKB 2158632906 ENCODE Processing Pipeline cd3b4275c7976d3de930134b982056b9 https://www.encodeproject.org/files/ENCFF837HCK/@@download/ENCFF837HCK.bigWig GRCh38 released ENCFF944TDV bed narrowPeak peaks ENCSR675LRO ChIP-seq EFO:0002067 K562 cell line Homo sapiens MLLT1-human ENCAB649WEQ DNA False 2016-06-14 ENCODE 1 ENCFF131XTL, ENCFF910IKB 6644453 ENCODE Processing Pipeline 12d561d0a8581e2249aca22a13713e2e https://www.encodeproject.org/files/ENCFF944TDV/@@download/ENCFF944TDV.bed.gz GRCh38 released ENCFF137YWA bed narrowPeak peaks ENCSR675LRO ChIP-seq EFO:0002067 K562 cell line Homo sapiens MLLT1-human ENCAB649WEQ DNA False 2016-06-14 ENCODE 2 ENCFF227IZS, ENCFF353XMB 6345252 ENCODE Processing Pipeline 215344f8d95ab198099232c60c721b8a https://www.encodeproject.org/files/ENCFF137YWA/@@download/ENCFF137YWA.bed.gz GRCh38 released ENCFF998NLN bed narrowPeak peaks ENCSR675LRO ChIP-seq EFO:0002067 K562 cell line Homo sapiens MLLT1-human ENCAB649WEQ DNA False 2016-06-14 ENCODE 1, 2 ENCFF131XTL, ENCFF227IZS, ENCFF353XMB, ENCFF910IKB 7226040 ENCODE Processing Pipeline 55d2deb88aed77ed1f3ef9748bf3d17a https://www.encodeproject.org/files/ENCFF998NLN/@@download/ENCFF998NLN.bed.gz GRCh38 released ENCFF230YZG bigBed narrowPeak peaks ENCSR675LRO ChIP-seq EFO:0002067 K562 cell line Homo sapiens MLLT1-human ENCAB649WEQ DNA False 2016-06-14 ENCODE 1 ENCFF944TDV 13295863 ENCODE Processing Pipeline a2200c7636a8ffb6b89b7bc21291fbac https://www.encodeproject.org/files/ENCFF230YZG/@@download/ENCFF230YZG.bigBed GRCh38 released ENCFF106FSX bigBed narrowPeak peaks ENCSR675LRO ChIP-seq EFO:0002067 K562 cell line Homo sapiens MLLT1-human ENCAB649WEQ DNA False 2016-06-14 ENCODE 2 ENCFF137YWA 13369065 ENCODE Processing Pipeline 6604fc1ba2f579871c638def100342db https://www.encodeproject.org/files/ENCFF106FSX/@@download/ENCFF106FSX.bigBed GRCh38 released ENCFF295RLO bigBed narrowPeak peaks ENCSR675LRO ChIP-seq EFO:0002067 K562 cell line Homo sapiens MLLT1-human ENCAB649WEQ DNA False 2016-06-14 ENCODE 1, 2 ENCFF998NLN 13192828 ENCODE Processing Pipeline 9cd89d34542055319610535d69be27e3 https://www.encodeproject.org/files/ENCFF295RLO/@@download/ENCFF295RLO.bigBed GRCh38 released ENCFF745CJF bed narrowPeak conservative idr thresholded peaks ENCSR675LRO ChIP-seq EFO:0002067 K562 cell line Homo sapiens MLLT1-human ENCAB649WEQ DNA False 2016-06-14 ENCODE 1, 2 ENCFF137YWA, ENCFF419RSJ, ENCFF944TDV, ENCFF998NLN 167041 ENCODE Processing Pipeline 1c2c00bf18bf71714844a3bb37a62d92 https://www.encodeproject.org/files/ENCFF745CJF/@@download/ENCFF745CJF.bed.gz GRCh38 released ENCFF384GYE bigBed narrowPeak conservative idr thresholded peaks ENCSR675LRO ChIP-seq EFO:0002067 K562 cell line Homo sapiens MLLT1-human ENCAB649WEQ DNA False 2016-06-14 ENCODE 1, 2 ENCFF745CJF 389659 ENCODE Processing Pipeline 2cc3ffb828fb3f7ab4d26bdab875cf1e https://www.encodeproject.org/files/ENCFF384GYE/@@download/ENCFF384GYE.bigBed GRCh38 released ENCFF388LUX bed narrowPeak optimal idr thresholded peaks ENCSR675LRO ChIP-seq EFO:0002067 K562 cell line Homo sapiens MLLT1-human ENCAB649WEQ DNA False 2016-06-14 ENCODE 1, 2 ENCFF137YWA, ENCFF419RSJ, ENCFF944TDV, ENCFF998NLN 249289 ENCODE Processing Pipeline 2bd8969d70f944c99a46017e037274a6 https://www.encodeproject.org/files/ENCFF388LUX/@@download/ENCFF388LUX.bed.gz GRCh38 released ENCFF052CVK bigBed narrowPeak optimal idr thresholded peaks ENCSR675LRO ChIP-seq EFO:0002067 K562 cell line Homo sapiens MLLT1-human ENCAB649WEQ DNA False 2016-06-14 ENCODE 1, 2 ENCFF388LUX 529920 ENCODE Processing Pipeline e30e4dd158b36f52e6691168965e116f https://www.encodeproject.org/files/ENCFF052CVK/@@download/ENCFF052CVK.bigBed GRCh38 released ENCFF531VHW bigWig signal p-value ENCSR675LRO ChIP-seq EFO:0002067 K562 cell line Homo sapiens MLLT1-human ENCAB649WEQ DNA False 2016-06-14 ENCODE 1, 2 ENCFF051LWI, ENCFF471WLV, ENCFF581ZJL, ENCFF821TOA 2024525678 ENCODE Processing Pipeline ddef83b82b76eaeea24383f96f966269 https://www.encodeproject.org/files/ENCFF531VHW/@@download/ENCFF531VHW.bigWig hg19 released ENCFF057GKG bed narrowPeak peaks ENCSR675LRO ChIP-seq EFO:0002067 K562 cell line Homo sapiens MLLT1-human ENCAB649WEQ DNA False 2016-06-14 ENCODE 1 ENCFF581ZJL, ENCFF821TOA 6650101 ENCODE Processing Pipeline c685a5d1d610d6d4d42b6e64e6cba59b https://www.encodeproject.org/files/ENCFF057GKG/@@download/ENCFF057GKG.bed.gz hg19 released ENCFF140PZM bigWig signal p-value ENCSR675LRO ChIP-seq EFO:0002067 K562 cell line Homo sapiens MLLT1-human ENCAB649WEQ DNA False 2016-06-14 ENCODE 1 ENCFF581ZJL, ENCFF821TOA 1211818904 ENCODE Processing Pipeline ff367ad16addb995feccf985d036041a https://www.encodeproject.org/files/ENCFF140PZM/@@download/ENCFF140PZM.bigWig hg19 released ENCFF168YOC bigWig fold change over control ENCSR675LRO ChIP-seq EFO:0002067 K562 cell line Homo sapiens MLLT1-human ENCAB649WEQ DNA False 2016-06-14 ENCODE 1 ENCFF581ZJL, ENCFF821TOA 1275559787 ENCODE Processing Pipeline e45cf25b11109f5f25dc37fa2aaa548f https://www.encodeproject.org/files/ENCFF168YOC/@@download/ENCFF168YOC.bigWig hg19 released ENCFF961SKK bigWig fold change over control ENCSR675LRO ChIP-seq EFO:0002067 K562 cell line Homo sapiens MLLT1-human ENCAB649WEQ DNA False 2016-06-14 ENCODE 2 ENCFF051LWI, ENCFF471WLV 1154276493 ENCODE Processing Pipeline 4ee52e3c94dc768541b7f040a6902c7c https://www.encodeproject.org/files/ENCFF961SKK/@@download/ENCFF961SKK.bigWig hg19 released ENCFF520BTA bigWig fold change over control ENCSR675LRO ChIP-seq EFO:0002067 K562 cell line Homo sapiens MLLT1-human ENCAB649WEQ DNA False 2016-06-14 ENCODE 1, 2 ENCFF051LWI, ENCFF471WLV, ENCFF581ZJL, ENCFF821TOA 2159925830 ENCODE Processing Pipeline 351b62d2e9a72c06bf946e4a26953cab https://www.encodeproject.org/files/ENCFF520BTA/@@download/ENCFF520BTA.bigWig hg19 released ENCFF222ORU bigBed narrowPeak peaks ENCSR675LRO ChIP-seq EFO:0002067 K562 cell line Homo sapiens MLLT1-human ENCAB649WEQ DNA False 2016-06-14 ENCODE 1 ENCFF057GKG 13283602 ENCODE Processing Pipeline b7099a1de4d60921187faab9e8c510d9 https://www.encodeproject.org/files/ENCFF222ORU/@@download/ENCFF222ORU.bigBed hg19 released ENCFF010SWX bigWig signal p-value ENCSR675LRO ChIP-seq EFO:0002067 K562 cell line Homo sapiens MLLT1-human ENCAB649WEQ DNA False 2016-06-14 ENCODE 2 ENCFF051LWI, ENCFF471WLV 1219597696 ENCODE Processing Pipeline bb32aa89d4f96642624dc4dbf695fbb1 https://www.encodeproject.org/files/ENCFF010SWX/@@download/ENCFF010SWX.bigWig hg19 released ENCFF929AWJ bed narrowPeak peaks ENCSR675LRO ChIP-seq EFO:0002067 K562 cell line Homo sapiens MLLT1-human ENCAB649WEQ DNA False 2016-06-14 ENCODE 2 ENCFF051LWI, ENCFF471WLV 6341953 ENCODE Processing Pipeline b55cda7b5759eaf429e79fa33aa4ff83 https://www.encodeproject.org/files/ENCFF929AWJ/@@download/ENCFF929AWJ.bed.gz hg19 released ENCFF549ABW bigBed narrowPeak peaks ENCSR675LRO ChIP-seq EFO:0002067 K562 cell line Homo sapiens MLLT1-human ENCAB649WEQ DNA False 2016-06-14 ENCODE 1, 2 ENCFF400BXE 13183556 ENCODE Processing Pipeline 7a51e867281f41f99c8d29126d577999 https://www.encodeproject.org/files/ENCFF549ABW/@@download/ENCFF549ABW.bigBed hg19 released ENCFF692EWX bigBed narrowPeak optimal idr thresholded peaks ENCSR675LRO ChIP-seq EFO:0002067 K562 cell line Homo sapiens MLLT1-human ENCAB649WEQ DNA False 2016-06-14 ENCODE 1, 2 ENCFF197OGH 533015 ENCODE Processing Pipeline cb12c749a0a31189d1419f1bc72f30ba https://www.encodeproject.org/files/ENCFF692EWX/@@download/ENCFF692EWX.bigBed hg19 released ENCFF756SZA bigBed narrowPeak peaks ENCSR675LRO ChIP-seq EFO:0002067 K562 cell line Homo sapiens MLLT1-human ENCAB649WEQ DNA False 2016-06-14 ENCODE 2 ENCFF929AWJ 13347251 ENCODE Processing Pipeline 76d9a3fe6d91f06a38bf4b61cce3b7c7 https://www.encodeproject.org/files/ENCFF756SZA/@@download/ENCFF756SZA.bigBed hg19 released ENCFF148VLB bed narrowPeak conservative idr thresholded peaks ENCSR675LRO ChIP-seq EFO:0002067 K562 cell line Homo sapiens MLLT1-human ENCAB649WEQ DNA False 2016-06-14 ENCODE 1, 2 ENCFF001TDO, ENCFF057GKG, ENCFF400BXE, ENCFF929AWJ 168994 ENCODE Processing Pipeline c3ec8b30735636847557c4dc4c33131d https://www.encodeproject.org/files/ENCFF148VLB/@@download/ENCFF148VLB.bed.gz hg19 released ENCFF449HIT bigBed narrowPeak conservative idr thresholded peaks ENCSR675LRO ChIP-seq EFO:0002067 K562 cell line Homo sapiens MLLT1-human ENCAB649WEQ DNA False 2016-06-14 ENCODE 1, 2 ENCFF148VLB 389026 ENCODE Processing Pipeline 533125b3449241abb17040de609a559c https://www.encodeproject.org/files/ENCFF449HIT/@@download/ENCFF449HIT.bigBed hg19 released ENCFF197OGH bed narrowPeak optimal idr thresholded peaks ENCSR675LRO ChIP-seq EFO:0002067 K562 cell line Homo sapiens MLLT1-human ENCAB649WEQ DNA False 2016-06-14 ENCODE 1, 2 ENCFF001TDO, ENCFF057GKG, ENCFF400BXE, ENCFF929AWJ 255168 ENCODE Processing Pipeline c15d2ef58a82ef9fef93dd34f601b9fe https://www.encodeproject.org/files/ENCFF197OGH/@@download/ENCFF197OGH.bed.gz hg19 released ENCFF400BXE bed narrowPeak peaks ENCSR675LRO ChIP-seq EFO:0002067 K562 cell line Homo sapiens MLLT1-human ENCAB649WEQ DNA False 2016-06-14 ENCODE 1, 2 ENCFF051LWI, ENCFF471WLV, ENCFF581ZJL, ENCFF821TOA 7231144 ENCODE Processing Pipeline be3d1c655e0c192b2e782be178ccd282 https://www.encodeproject.org/files/ENCFF400BXE/@@download/ENCFF400BXE.bed.gz hg19 released ENCFF241DJP bam unfiltered alignments ENCSR820GND ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB301SIR DNA False 2016-07-28 ENCODE 1 100 ENCFF044YZK, ENCFF807MUK, ENCFF829JEX 4362051141 ENCODE Processing Pipeline c4b201ed95f9f60b3706b409339deb96 https://www.encodeproject.org/files/ENCFF241DJP/@@download/ENCFF241DJP.bam hg19 released low read depth ENCFF359FMP bam unfiltered alignments ENCSR820GND ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB301SIR DNA False 2016-07-28 ENCODE 2 100 ENCFF250LUM, ENCFF307RHE, ENCFF807MUK 4207889241 ENCODE Processing Pipeline 49045501fe3a97bc9337cb89eddda979 https://www.encodeproject.org/files/ENCFF359FMP/@@download/ENCFF359FMP.bam hg19 released low read depth ENCFF044YZK fastq reads ENCSR820GND ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB301SIR DNA False 2016-07-28 ENCODE 1 1 100 paired-ended 2 ENCFF829JEX 1986436805 Michael Snyder, Stanford 33d68680ae58cdee6b37cf87f8b971b3 SRA:SRR5112127 https://www.encodeproject.org/files/ENCFF044YZK/@@download/ENCFF044YZK.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFH/ released low read depth ENCFF307RHE fastq reads ENCSR820GND ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB301SIR DNA False 2016-07-28 ENCODE 2 1 100 paired-ended 1 ENCFF250LUM 1910691367 Michael Snyder, Stanford 3683a0b65cf45c89e6184fd0b7ce269e SRA:SRR5112128 https://www.encodeproject.org/files/ENCFF307RHE/@@download/ENCFF307RHE.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFD/ released low read depth ENCFF829JEX fastq reads ENCSR820GND ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB301SIR DNA False 2016-07-28 ENCODE 1 1 100 paired-ended 1 ENCFF044YZK 1936874967 Michael Snyder, Stanford 4b3e73aa485c45ad4e189063916022b4 SRA:SRR5112127 https://www.encodeproject.org/files/ENCFF829JEX/@@download/ENCFF829JEX.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFF/ released low read depth ENCFF250LUM fastq reads ENCSR820GND ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB301SIR DNA False 2016-07-28 ENCODE 2 1 100 paired-ended 2 ENCFF307RHE 1946787816 Michael Snyder, Stanford e0df5ebb1950b7a634c33a9e34ebdb7a SRA:SRR5112128 https://www.encodeproject.org/files/ENCFF250LUM/@@download/ENCFF250LUM.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFA/ released low read depth ENCFF050ZWR bam alignments ENCSR820GND ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB301SIR DNA False 2016-07-28 ENCODE 1 100 ENCFF044YZK, ENCFF807MUK, ENCFF829JEX 3728434340 ENCODE Processing Pipeline c39c98056f4cdfbe52e6857e02e7fc60 https://www.encodeproject.org/files/ENCFF050ZWR/@@download/ENCFF050ZWR.bam hg19 released low read depth ENCFF842SKP bam alignments ENCSR820GND ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB301SIR DNA False 2016-07-28 ENCODE 2 100 ENCFF250LUM, ENCFF307RHE, ENCFF807MUK 3471689816 ENCODE Processing Pipeline 7173a0160ccece05ef503cf77ec5c008 https://www.encodeproject.org/files/ENCFF842SKP/@@download/ENCFF842SKP.bam hg19 released low read depth ENCFF579BXC bigWig signal p-value ENCSR820GND ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB301SIR DNA False 2016-07-28 ENCODE 1 ENCFF050ZWR, ENCFF581ZJL 1093167317 ENCODE Processing Pipeline 55784c5ecf1095e661c3f29a3f9eed57 https://www.encodeproject.org/files/ENCFF579BXC/@@download/ENCFF579BXC.bigWig hg19 released low read depth ENCFF430IVD bigWig signal p-value ENCSR820GND ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB301SIR DNA False 2016-07-28 ENCODE 2 ENCFF051LWI, ENCFF842SKP 1092454100 ENCODE Processing Pipeline 05db63176f1c3bc2305d0d52d972e103 https://www.encodeproject.org/files/ENCFF430IVD/@@download/ENCFF430IVD.bigWig hg19 released low read depth ENCFF388GQF bigWig signal p-value ENCSR820GND ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB301SIR DNA False 2016-07-28 ENCODE 1, 2 ENCFF050ZWR, ENCFF051LWI, ENCFF581ZJL, ENCFF842SKP 1584356952 ENCODE Processing Pipeline 0b814f968e4e5a4791c77005529a9aca https://www.encodeproject.org/files/ENCFF388GQF/@@download/ENCFF388GQF.bigWig hg19 released low read depth ENCFF997JCO bigWig fold change over control ENCSR820GND ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB301SIR DNA False 2016-07-28 ENCODE 1 ENCFF050ZWR, ENCFF581ZJL 1111079811 ENCODE Processing Pipeline 429cbbb16dc26a4695fe7c91e8a0e083 https://www.encodeproject.org/files/ENCFF997JCO/@@download/ENCFF997JCO.bigWig hg19 released low read depth ENCFF300PEI bigWig fold change over control ENCSR820GND ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB301SIR DNA False 2016-07-28 ENCODE 2 ENCFF051LWI, ENCFF842SKP 1000065434 ENCODE Processing Pipeline 2ffc8358911ec5e7e05a8a608d8ad033 https://www.encodeproject.org/files/ENCFF300PEI/@@download/ENCFF300PEI.bigWig hg19 released low read depth ENCFF847TGB bigWig fold change over control ENCSR820GND ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB301SIR DNA False 2016-07-28 ENCODE 1, 2 ENCFF050ZWR, ENCFF051LWI, ENCFF581ZJL, ENCFF842SKP 1994409530 ENCODE Processing Pipeline 3f129cb9e9e8b2b368febb4cea9c0ea6 https://www.encodeproject.org/files/ENCFF847TGB/@@download/ENCFF847TGB.bigWig hg19 released low read depth ENCFF696NDZ bed narrowPeak peaks ENCSR820GND ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB301SIR DNA False 2016-07-28 ENCODE 1 ENCFF050ZWR, ENCFF581ZJL 6922724 ENCODE Processing Pipeline cdeff180b250f2f1f3a024f0da98ba52 https://www.encodeproject.org/files/ENCFF696NDZ/@@download/ENCFF696NDZ.bed.gz hg19 released low read depth ENCFF710KZS bigBed narrowPeak peaks ENCSR820GND ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB301SIR DNA False 2016-07-28 ENCODE 2 ENCFF232HEV 13029235 ENCODE Processing Pipeline 5f9465a6de88d8433c1bb70b26d1ac7d https://www.encodeproject.org/files/ENCFF710KZS/@@download/ENCFF710KZS.bigBed hg19 released low read depth ENCFF232HEV bed narrowPeak peaks ENCSR820GND ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB301SIR DNA False 2016-07-28 ENCODE 2 ENCFF051LWI, ENCFF842SKP 6884646 ENCODE Processing Pipeline 4416b7547a5b229856a3940d5b90c0f9 https://www.encodeproject.org/files/ENCFF232HEV/@@download/ENCFF232HEV.bed.gz hg19 released low read depth ENCFF813HMN bed narrowPeak peaks ENCSR820GND ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB301SIR DNA False 2016-07-28 ENCODE 1, 2 ENCFF050ZWR, ENCFF051LWI, ENCFF581ZJL, ENCFF842SKP 7260038 ENCODE Processing Pipeline 708edd54fcc71c29c1c51c1f0d9321f9 https://www.encodeproject.org/files/ENCFF813HMN/@@download/ENCFF813HMN.bed.gz hg19 released low read depth ENCFF432CNX bigBed narrowPeak peaks ENCSR820GND ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB301SIR DNA False 2016-07-28 ENCODE 1 ENCFF696NDZ 13103223 ENCODE Processing Pipeline 6f4e0c38d4b7b168804daa65609beb3a https://www.encodeproject.org/files/ENCFF432CNX/@@download/ENCFF432CNX.bigBed hg19 released low read depth ENCFF338OLR bigBed narrowPeak peaks ENCSR820GND ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB301SIR DNA False 2016-07-28 ENCODE 1, 2 ENCFF813HMN 12856963 ENCODE Processing Pipeline 8aaeb0408022b8cca7e0eace853e810b https://www.encodeproject.org/files/ENCFF338OLR/@@download/ENCFF338OLR.bigBed hg19 released low read depth ENCFF046RKA bam unfiltered alignments ENCSR820GND ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB301SIR DNA False 2016-07-28 ENCODE 2 100 ENCFF250LUM, ENCFF307RHE, ENCFF643CGH 4211050316 ENCODE Processing Pipeline 6a60e6bad357dae40b57ee7414b3a782 https://www.encodeproject.org/files/ENCFF046RKA/@@download/ENCFF046RKA.bam GRCh38 released low read depth ENCFF571LYC bam unfiltered alignments ENCSR820GND ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB301SIR DNA False 2016-07-28 ENCODE 1 100 ENCFF044YZK, ENCFF643CGH, ENCFF829JEX 4366712101 ENCODE Processing Pipeline fa55dfa5652c4aca27e4dc059b7eb907 https://www.encodeproject.org/files/ENCFF571LYC/@@download/ENCFF571LYC.bam GRCh38 released low read depth ENCFF015UIX bam alignments ENCSR820GND ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB301SIR DNA False 2016-07-28 ENCODE 2 100 ENCFF250LUM, ENCFF307RHE, ENCFF643CGH 3472577277 ENCODE Processing Pipeline 9f6ac174c3575ab5906bc9d2f048e4df https://www.encodeproject.org/files/ENCFF015UIX/@@download/ENCFF015UIX.bam GRCh38 released low read depth ENCFF587HZM bam alignments ENCSR820GND ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB301SIR DNA False 2016-07-28 ENCODE 1 100 ENCFF044YZK, ENCFF643CGH, ENCFF829JEX 3729985722 ENCODE Processing Pipeline 1f45eb4a678d29aa3b2a3d32e045d1e4 https://www.encodeproject.org/files/ENCFF587HZM/@@download/ENCFF587HZM.bam GRCh38 released low read depth ENCFF447ERS bigWig signal p-value ENCSR820GND ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB301SIR DNA False 2016-07-28 ENCODE 1 ENCFF587HZM, ENCFF910IKB 1108512186 ENCODE Processing Pipeline fbebc67b199fdeca4d1e93a1dbafb9bc https://www.encodeproject.org/files/ENCFF447ERS/@@download/ENCFF447ERS.bigWig GRCh38 released low read depth ENCFF157LID bigWig signal p-value ENCSR820GND ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB301SIR DNA False 2016-07-28 ENCODE 2 ENCFF015UIX, ENCFF227IZS 865571542 ENCODE Processing Pipeline be0d086c8ee84c9809ce9ef4bc49716f https://www.encodeproject.org/files/ENCFF157LID/@@download/ENCFF157LID.bigWig GRCh38 released low read depth ENCFF221QSU bigWig signal p-value ENCSR820GND ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB301SIR DNA False 2016-07-28 ENCODE 1, 2 ENCFF015UIX, ENCFF227IZS, ENCFF587HZM, ENCFF910IKB 1734596597 ENCODE Processing Pipeline 79f5a69d16c6eddf2bdd633d9a748355 https://www.encodeproject.org/files/ENCFF221QSU/@@download/ENCFF221QSU.bigWig GRCh38 released low read depth ENCFF063FSY bigWig fold change over control ENCSR820GND ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB301SIR DNA False 2016-07-28 ENCODE 1 ENCFF587HZM, ENCFF910IKB 1116349413 ENCODE Processing Pipeline 21e8842edc6ab0ba16a3c3dc7eb6c546 https://www.encodeproject.org/files/ENCFF063FSY/@@download/ENCFF063FSY.bigWig GRCh38 released low read depth ENCFF735ZOU bigWig fold change over control ENCSR820GND ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB301SIR DNA False 2016-07-28 ENCODE 2 ENCFF015UIX, ENCFF227IZS 1002621074 ENCODE Processing Pipeline a961ce86496112a685f2b5d98ce3bc18 https://www.encodeproject.org/files/ENCFF735ZOU/@@download/ENCFF735ZOU.bigWig GRCh38 released low read depth ENCFF394UYP bigWig fold change over control ENCSR820GND ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB301SIR DNA False 2016-07-28 ENCODE 1, 2 ENCFF015UIX, ENCFF227IZS, ENCFF587HZM, ENCFF910IKB 2012243395 ENCODE Processing Pipeline 8b0e5daa60a0b212c97b8b73651ebf48 https://www.encodeproject.org/files/ENCFF394UYP/@@download/ENCFF394UYP.bigWig GRCh38 released low read depth ENCFF243MBZ bed narrowPeak peaks ENCSR820GND ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB301SIR DNA False 2016-07-28 ENCODE 2 ENCFF015UIX, ENCFF227IZS 6805431 ENCODE Processing Pipeline 53cb9d06b5f42fedbf17fb42e2129e74 https://www.encodeproject.org/files/ENCFF243MBZ/@@download/ENCFF243MBZ.bed.gz GRCh38 released low read depth ENCFF831GNR bed narrowPeak peaks ENCSR820GND ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB301SIR DNA False 2016-07-28 ENCODE 1 ENCFF587HZM, ENCFF910IKB 6823843 ENCODE Processing Pipeline 4af38959390946dc6019fbd98ba68bc3 https://www.encodeproject.org/files/ENCFF831GNR/@@download/ENCFF831GNR.bed.gz GRCh38 released low read depth ENCFF084KSI bigBed narrowPeak peaks ENCSR820GND ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB301SIR DNA False 2016-07-28 ENCODE 1 ENCFF831GNR 13110549 ENCODE Processing Pipeline f808b10786af114b5b1a75483f95e187 https://www.encodeproject.org/files/ENCFF084KSI/@@download/ENCFF084KSI.bigBed GRCh38 released low read depth ENCFF057PDR bed narrowPeak peaks ENCSR820GND ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB301SIR DNA False 2016-07-28 ENCODE 1, 2 ENCFF015UIX, ENCFF227IZS, ENCFF587HZM, ENCFF910IKB 7255373 ENCODE Processing Pipeline cc1aa6c8daf96c178ffdaa07f9dfeec4 https://www.encodeproject.org/files/ENCFF057PDR/@@download/ENCFF057PDR.bed.gz GRCh38 released low read depth ENCFF770VPK bigBed narrowPeak peaks ENCSR820GND ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB301SIR DNA False 2016-07-28 ENCODE 2 ENCFF243MBZ 13034875 ENCODE Processing Pipeline 2c354d57c4554ce11430171b54058797 https://www.encodeproject.org/files/ENCFF770VPK/@@download/ENCFF770VPK.bigBed GRCh38 released low read depth ENCFF226YIS bigBed narrowPeak peaks ENCSR820GND ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB301SIR DNA False 2016-07-28 ENCODE 1, 2 ENCFF057PDR 12862884 ENCODE Processing Pipeline 0e06c8a806b7a07c94284cf6379a31cf https://www.encodeproject.org/files/ENCFF226YIS/@@download/ENCFF226YIS.bigBed GRCh38 released low read depth ENCFF393TSA bigBed narrowPeak conservative idr thresholded peaks ENCSR820GND ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB301SIR DNA False 2016-07-28 ENCODE 1, 2 ENCFF966CGZ 285354 ENCODE Processing Pipeline 688ea10dee7e5f5d0abb0013852655f5 https://www.encodeproject.org/files/ENCFF393TSA/@@download/ENCFF393TSA.bigBed GRCh38 released low read depth ENCFF966CGZ bed narrowPeak conservative idr thresholded peaks ENCSR820GND ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB301SIR DNA False 2016-07-28 ENCODE 1, 2 ENCFF057PDR, ENCFF243MBZ, ENCFF419RSJ, ENCFF831GNR 101654 ENCODE Processing Pipeline 850bc8018e9d1f71532a78f51b18e468 https://www.encodeproject.org/files/ENCFF966CGZ/@@download/ENCFF966CGZ.bed.gz GRCh38 released low read depth ENCFF349MSP bed narrowPeak optimal idr thresholded peaks ENCSR820GND ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB301SIR DNA False 2016-07-28 ENCODE 1, 2 ENCFF057PDR, ENCFF243MBZ, ENCFF419RSJ, ENCFF831GNR 164122 ENCODE Processing Pipeline dfb29d14928060c7b12347bbf74fedb5 https://www.encodeproject.org/files/ENCFF349MSP/@@download/ENCFF349MSP.bed.gz GRCh38 released low read depth ENCFF603TYC bigBed narrowPeak optimal idr thresholded peaks ENCSR820GND ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB301SIR DNA False 2016-07-28 ENCODE 1, 2 ENCFF349MSP 396693 ENCODE Processing Pipeline 336b0211b59298c0e08c5b3898c587d2 https://www.encodeproject.org/files/ENCFF603TYC/@@download/ENCFF603TYC.bigBed GRCh38 released low read depth ENCFF539WLH bed narrowPeak optimal idr thresholded peaks ENCSR820GND ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB301SIR DNA False 2016-07-28 ENCODE 1, 2 ENCFF001TDO, ENCFF232HEV, ENCFF696NDZ, ENCFF813HMN 128344 ENCODE Processing Pipeline 2a1c65eb617ccef1f2444da1282bf8b0 https://www.encodeproject.org/files/ENCFF539WLH/@@download/ENCFF539WLH.bed.gz hg19 released low read depth ENCFF697DZC bed narrowPeak conservative idr thresholded peaks ENCSR820GND ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB301SIR DNA False 2016-07-28 ENCODE 1, 2 ENCFF001TDO, ENCFF232HEV, ENCFF696NDZ, ENCFF813HMN 81053 ENCODE Processing Pipeline db0b6abbe2913ccc712c01c3aaa674ae https://www.encodeproject.org/files/ENCFF697DZC/@@download/ENCFF697DZC.bed.gz hg19 released low read depth ENCFF954GSM bigBed narrowPeak conservative idr thresholded peaks ENCSR820GND ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB301SIR DNA False 2016-07-28 ENCODE 1, 2 ENCFF697DZC 214781 ENCODE Processing Pipeline 3be538bbda0d8ef1e23ddbd5bc35c4a7 https://www.encodeproject.org/files/ENCFF954GSM/@@download/ENCFF954GSM.bigBed hg19 released low read depth ENCFF369QLE bigBed narrowPeak optimal idr thresholded peaks ENCSR820GND ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB301SIR DNA False 2016-07-28 ENCODE 1, 2 ENCFF539WLH 285189 ENCODE Processing Pipeline ab59fe1920baae048851de213a8ddcff https://www.encodeproject.org/files/ENCFF369QLE/@@download/ENCFF369QLE.bigBed hg19 released low read depth ENCFF326BXX fastq reads ENCSR211LTF ChIP-seq EFO:0002067 K562 cell line Homo sapiens EGR1-human ENCAB899PTZ DNA False 2017-05-17 ENCODE 1 1 100 paired-ended 1 ENCFF207NIS 1976699881 Michael Snyder, Stanford e5bf0447af1c57e80086cc6ceb50ec72 SRA:SRR6212721 https://www.encodeproject.org/files/ENCFF326BXX/@@download/ENCFF326BXX.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFF/ released low read depth ENCFF207NIS fastq reads ENCSR211LTF ChIP-seq EFO:0002067 K562 cell line Homo sapiens EGR1-human ENCAB899PTZ DNA False 2017-05-17 ENCODE 1 1 100 paired-ended 2 ENCFF326BXX 1996630203 Michael Snyder, Stanford 45953fbfc1d33d0a5162554f95cf3697 SRA:SRR6212721 https://www.encodeproject.org/files/ENCFF207NIS/@@download/ENCFF207NIS.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFH/ released low read depth ENCFF217XOV fastq reads ENCSR211LTF ChIP-seq EFO:0002067 K562 cell line Homo sapiens EGR1-human ENCAB899PTZ DNA False 2017-05-17 ENCODE 2 1 100 paired-ended 1 ENCFF599IKS 1940012856 Michael Snyder, Stanford a57332b0115cc3d949742b87f10bfec0 SRA:SRR6212722 https://www.encodeproject.org/files/ENCFF217XOV/@@download/ENCFF217XOV.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFD/ released low read depth ENCFF599IKS fastq reads ENCSR211LTF ChIP-seq EFO:0002067 K562 cell line Homo sapiens EGR1-human ENCAB899PTZ DNA False 2017-05-17 ENCODE 2 1 100 paired-ended 2 ENCFF217XOV 1961086906 Michael Snyder, Stanford 7feb78134bb937e9b477f981e2b60b78 SRA:SRR6212722 https://www.encodeproject.org/files/ENCFF599IKS/@@download/ENCFF599IKS.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFA/ released low read depth ENCFF992NYF bam unfiltered alignments ENCSR211LTF ChIP-seq EFO:0002067 K562 cell line Homo sapiens EGR1-human ENCAB899PTZ DNA False 2017-05-17 ENCODE 2 100 ENCFF217XOV, ENCFF599IKS, ENCFF643CGH 4237230822 ENCODE Processing Pipeline e2e4196e8a0903a1a6a45ae906bc8cb5 https://www.encodeproject.org/files/ENCFF992NYF/@@download/ENCFF992NYF.bam GRCh38 released low read depth ENCFF259XPA bam alignments ENCSR211LTF ChIP-seq EFO:0002067 K562 cell line Homo sapiens EGR1-human ENCAB899PTZ DNA False 2017-05-17 ENCODE 2 100 ENCFF217XOV, ENCFF599IKS, ENCFF643CGH 3501347226 ENCODE Processing Pipeline 118e68c5da27845e09a9981eb9d58431 https://www.encodeproject.org/files/ENCFF259XPA/@@download/ENCFF259XPA.bam GRCh38 released low read depth ENCFF652QJT bam unfiltered alignments ENCSR211LTF ChIP-seq EFO:0002067 K562 cell line Homo sapiens EGR1-human ENCAB899PTZ DNA False 2017-05-17 ENCODE 1 100 ENCFF207NIS, ENCFF326BXX, ENCFF643CGH 4321128978 ENCODE Processing Pipeline 25d85b8c64d224f50bef0f0105113ebc https://www.encodeproject.org/files/ENCFF652QJT/@@download/ENCFF652QJT.bam GRCh38 released low read depth ENCFF153QLL bam alignments ENCSR211LTF ChIP-seq EFO:0002067 K562 cell line Homo sapiens EGR1-human ENCAB899PTZ DNA False 2017-05-17 ENCODE 1 100 ENCFF207NIS, ENCFF326BXX, ENCFF643CGH 3539626268 ENCODE Processing Pipeline aa839266379f2b3e79c0dc37cc837532 https://www.encodeproject.org/files/ENCFF153QLL/@@download/ENCFF153QLL.bam GRCh38 released low read depth ENCFF670VTD bigWig signal p-value ENCSR211LTF ChIP-seq EFO:0002067 K562 cell line Homo sapiens EGR1-human ENCAB899PTZ DNA False 2017-05-17 ENCODE 2 ENCFF227IZS, ENCFF259XPA 942331698 ENCODE Processing Pipeline 7e84a6815893a3c3c3fde27ae32576e0 https://www.encodeproject.org/files/ENCFF670VTD/@@download/ENCFF670VTD.bigWig GRCh38 released low read depth ENCFF461DMV bed narrowPeak peaks ENCSR211LTF ChIP-seq EFO:0002067 K562 cell line Homo sapiens EGR1-human ENCAB899PTZ DNA False 2017-05-17 ENCODE 2 ENCFF227IZS, ENCFF259XPA 6655933 ENCODE Processing Pipeline 01a95c77831e19fba6e77544197f87e8 https://www.encodeproject.org/files/ENCFF461DMV/@@download/ENCFF461DMV.bed.gz GRCh38 released low read depth ENCFF237YNN bed narrowPeak conservative idr thresholded peaks ENCSR211LTF ChIP-seq EFO:0002067 K562 cell line Homo sapiens EGR1-human ENCAB899PTZ DNA False 2017-05-17 ENCODE 1, 2 ENCFF419RSJ, ENCFF461DMV, ENCFF654PAG, ENCFF693NGB 473181 ENCODE Processing Pipeline 0dafb2fb7171a8807435302b7540e39f https://www.encodeproject.org/files/ENCFF237YNN/@@download/ENCFF237YNN.bed.gz GRCh38 released low read depth ENCFF434JZR bigBed narrowPeak conservative idr thresholded peaks ENCSR211LTF ChIP-seq EFO:0002067 K562 cell line Homo sapiens EGR1-human ENCAB899PTZ DNA False 2017-05-17 ENCODE 1, 2 ENCFF237YNN 978062 ENCODE Processing Pipeline 21acfb89f6c51e2b7713f46c3d437eb3 https://www.encodeproject.org/files/ENCFF434JZR/@@download/ENCFF434JZR.bigBed GRCh38 released low read depth ENCFF104FAR bigWig signal p-value ENCSR211LTF ChIP-seq EFO:0002067 K562 cell line Homo sapiens EGR1-human ENCAB899PTZ DNA False 2017-05-17 ENCODE 1, 2 ENCFF153QLL, ENCFF227IZS, ENCFF259XPA, ENCFF910IKB 1532331307 ENCODE Processing Pipeline 575ee1e07ef401302de34c62367605e6 https://www.encodeproject.org/files/ENCFF104FAR/@@download/ENCFF104FAR.bigWig GRCh38 released low read depth ENCFF478LGP bigWig signal p-value ENCSR211LTF ChIP-seq EFO:0002067 K562 cell line Homo sapiens EGR1-human ENCAB899PTZ DNA False 2017-05-17 ENCODE 1 ENCFF153QLL, ENCFF910IKB 1062698064 ENCODE Processing Pipeline b6ba64450bfa6f819bc533281e560b2d https://www.encodeproject.org/files/ENCFF478LGP/@@download/ENCFF478LGP.bigWig GRCh38 released low read depth ENCFF459NBC bigBed narrowPeak peaks ENCSR211LTF ChIP-seq EFO:0002067 K562 cell line Homo sapiens EGR1-human ENCAB899PTZ DNA False 2017-05-17 ENCODE 1, 2 ENCFF654PAG 13278860 ENCODE Processing Pipeline c5eab561c651fdf73c036289080b4587 https://www.encodeproject.org/files/ENCFF459NBC/@@download/ENCFF459NBC.bigBed GRCh38 released low read depth ENCFF055DFW bigWig fold change over control ENCSR211LTF ChIP-seq EFO:0002067 K562 cell line Homo sapiens EGR1-human ENCAB899PTZ DNA False 2017-05-17 ENCODE 2 ENCFF227IZS, ENCFF259XPA 1031837101 ENCODE Processing Pipeline 476750bb3dce28faccad1ed228474b98 https://www.encodeproject.org/files/ENCFF055DFW/@@download/ENCFF055DFW.bigWig GRCh38 released low read depth ENCFF654PAG bed narrowPeak peaks ENCSR211LTF ChIP-seq EFO:0002067 K562 cell line Homo sapiens EGR1-human ENCAB899PTZ DNA False 2017-05-17 ENCODE 1, 2 ENCFF153QLL, ENCFF227IZS, ENCFF259XPA, ENCFF910IKB 7175014 ENCODE Processing Pipeline 8d78b7c98d6cb22cf8325070ad31c89c https://www.encodeproject.org/files/ENCFF654PAG/@@download/ENCFF654PAG.bed.gz GRCh38 released low read depth ENCFF401MLE bigBed narrowPeak optimal idr thresholded peaks ENCSR211LTF ChIP-seq EFO:0002067 K562 cell line Homo sapiens EGR1-human ENCAB899PTZ DNA False 2017-05-17 ENCODE 1, 2 ENCFF375RDB 1077567 ENCODE Processing Pipeline f09f4667cda7c05d647bdcd5d3a291be https://www.encodeproject.org/files/ENCFF401MLE/@@download/ENCFF401MLE.bigBed GRCh38 released low read depth ENCFF122YRT bigWig fold change over control ENCSR211LTF ChIP-seq EFO:0002067 K562 cell line Homo sapiens EGR1-human ENCAB899PTZ DNA False 2017-05-17 ENCODE 1 ENCFF153QLL, ENCFF910IKB 1079707732 ENCODE Processing Pipeline 8e5d1c6d0e09f4fc00324ab2c9c65a4e https://www.encodeproject.org/files/ENCFF122YRT/@@download/ENCFF122YRT.bigWig GRCh38 released low read depth ENCFF226GXE bigWig fold change over control ENCSR211LTF ChIP-seq EFO:0002067 K562 cell line Homo sapiens EGR1-human ENCAB899PTZ DNA False 2017-05-17 ENCODE 1, 2 ENCFF153QLL, ENCFF227IZS, ENCFF259XPA, ENCFF910IKB 1953766781 ENCODE Processing Pipeline 0d3bf2012a4b7c1850655141c2b34b05 https://www.encodeproject.org/files/ENCFF226GXE/@@download/ENCFF226GXE.bigWig GRCh38 released low read depth ENCFF693NGB bed narrowPeak peaks ENCSR211LTF ChIP-seq EFO:0002067 K562 cell line Homo sapiens EGR1-human ENCAB899PTZ DNA False 2017-05-17 ENCODE 1 ENCFF153QLL, ENCFF910IKB 6499306 ENCODE Processing Pipeline 331f42a9b13f9101bac8ee2dabe94a12 https://www.encodeproject.org/files/ENCFF693NGB/@@download/ENCFF693NGB.bed.gz GRCh38 released low read depth ENCFF581YCO bigBed narrowPeak peaks ENCSR211LTF ChIP-seq EFO:0002067 K562 cell line Homo sapiens EGR1-human ENCAB899PTZ DNA False 2017-05-17 ENCODE 1 ENCFF693NGB 13436142 ENCODE Processing Pipeline 5778475db3ea2c490f0cd02f417c1c50 https://www.encodeproject.org/files/ENCFF581YCO/@@download/ENCFF581YCO.bigBed GRCh38 released low read depth ENCFF393LRH bigBed narrowPeak peaks ENCSR211LTF ChIP-seq EFO:0002067 K562 cell line Homo sapiens EGR1-human ENCAB899PTZ DNA False 2017-05-17 ENCODE 2 ENCFF461DMV 13372150 ENCODE Processing Pipeline 3ba5cf971ba3d6846de915af029b8c6d https://www.encodeproject.org/files/ENCFF393LRH/@@download/ENCFF393LRH.bigBed GRCh38 released low read depth ENCFF375RDB bed narrowPeak optimal idr thresholded peaks ENCSR211LTF ChIP-seq EFO:0002067 K562 cell line Homo sapiens EGR1-human ENCAB899PTZ DNA False 2017-05-17 ENCODE 1, 2 ENCFF419RSJ, ENCFF461DMV, ENCFF654PAG, ENCFF693NGB 538133 ENCODE Processing Pipeline df1598e8f6f9854c15424d47603f41b4 https://www.encodeproject.org/files/ENCFF375RDB/@@download/ENCFF375RDB.bed.gz GRCh38 released low read depth ENCFF199LSN bam unfiltered alignments ENCSR211LTF ChIP-seq EFO:0002067 K562 cell line Homo sapiens EGR1-human ENCAB899PTZ DNA False 2017-05-17 ENCODE 2 100 ENCFF217XOV, ENCFF599IKS, ENCFF807MUK 4232901415 ENCODE Processing Pipeline 9705f0efeee3cf2d3fe488ab5ab1403f https://www.encodeproject.org/files/ENCFF199LSN/@@download/ENCFF199LSN.bam hg19 released low read depth ENCFF243CZA bam unfiltered alignments ENCSR211LTF ChIP-seq EFO:0002067 K562 cell line Homo sapiens EGR1-human ENCAB899PTZ DNA False 2017-05-17 ENCODE 1 100 ENCFF207NIS, ENCFF326BXX, ENCFF807MUK 4316998653 ENCODE Processing Pipeline 87e20a17dd2eff1d83e493cc69350329 https://www.encodeproject.org/files/ENCFF243CZA/@@download/ENCFF243CZA.bam hg19 released low read depth ENCFF293ZMY bam alignments ENCSR211LTF ChIP-seq EFO:0002067 K562 cell line Homo sapiens EGR1-human ENCAB899PTZ DNA False 2017-05-17 ENCODE 2 100 ENCFF217XOV, ENCFF599IKS, ENCFF807MUK 3498520277 ENCODE Processing Pipeline 2238ea91437782a174b663c8d5151870 https://www.encodeproject.org/files/ENCFF293ZMY/@@download/ENCFF293ZMY.bam hg19 released low read depth ENCFF065XRG bam alignments ENCSR211LTF ChIP-seq EFO:0002067 K562 cell line Homo sapiens EGR1-human ENCAB899PTZ DNA False 2017-05-17 ENCODE 1 100 ENCFF207NIS, ENCFF326BXX, ENCFF807MUK 3537256767 ENCODE Processing Pipeline 4b5c77541926fc1551c3053d5d03936c https://www.encodeproject.org/files/ENCFF065XRG/@@download/ENCFF065XRG.bam hg19 released low read depth ENCFF113AIB bigWig fold change over control ENCSR211LTF ChIP-seq EFO:0002067 K562 cell line Homo sapiens EGR1-human ENCAB899PTZ DNA False 2017-05-17 ENCODE 1 ENCFF065XRG, ENCFF581ZJL 1063805362 ENCODE Processing Pipeline 8b0e803c98925e085058517a1be54c01 https://www.encodeproject.org/files/ENCFF113AIB/@@download/ENCFF113AIB.bigWig hg19 released low read depth ENCFF279LBB bigWig signal p-value ENCSR211LTF ChIP-seq EFO:0002067 K562 cell line Homo sapiens EGR1-human ENCAB899PTZ DNA False 2017-05-17 ENCODE 1 ENCFF065XRG, ENCFF581ZJL 1096559525 ENCODE Processing Pipeline b119f4b0be61f37494d61f58663d07d7 https://www.encodeproject.org/files/ENCFF279LBB/@@download/ENCFF279LBB.bigWig hg19 released low read depth ENCFF461LTA bigWig fold change over control ENCSR211LTF ChIP-seq EFO:0002067 K562 cell line Homo sapiens EGR1-human ENCAB899PTZ DNA False 2017-05-17 ENCODE 1, 2 ENCFF051LWI, ENCFF065XRG, ENCFF293ZMY, ENCFF581ZJL 1964023096 ENCODE Processing Pipeline ec75f98d98a96b6e8ea5f8a938cdfd41 https://www.encodeproject.org/files/ENCFF461LTA/@@download/ENCFF461LTA.bigWig hg19 released low read depth ENCFF920IJY bed narrowPeak peaks ENCSR211LTF ChIP-seq EFO:0002067 K562 cell line Homo sapiens EGR1-human ENCAB899PTZ DNA False 2017-05-17 ENCODE 1 ENCFF065XRG, ENCFF581ZJL 6522057 ENCODE Processing Pipeline 5eabd6928477c3a58ca0ae21b1f17a75 https://www.encodeproject.org/files/ENCFF920IJY/@@download/ENCFF920IJY.bed.gz hg19 released low read depth ENCFF756CUT bigBed narrowPeak peaks ENCSR211LTF ChIP-seq EFO:0002067 K562 cell line Homo sapiens EGR1-human ENCAB899PTZ DNA False 2017-05-17 ENCODE 1 ENCFF920IJY 13447363 ENCODE Processing Pipeline d9ee1a8340dadef5a2b87f0d78661319 https://www.encodeproject.org/files/ENCFF756CUT/@@download/ENCFF756CUT.bigBed hg19 released low read depth ENCFF433BHI bigBed narrowPeak peaks ENCSR211LTF ChIP-seq EFO:0002067 K562 cell line Homo sapiens EGR1-human ENCAB899PTZ DNA False 2017-05-17 ENCODE 1, 2 ENCFF343JJX 13305495 ENCODE Processing Pipeline 49c5fa061ef02e43526f888d80978591 https://www.encodeproject.org/files/ENCFF433BHI/@@download/ENCFF433BHI.bigBed hg19 released low read depth ENCFF634YJK bed narrowPeak peaks ENCSR211LTF ChIP-seq EFO:0002067 K562 cell line Homo sapiens EGR1-human ENCAB899PTZ DNA False 2017-05-17 ENCODE 2 ENCFF051LWI, ENCFF293ZMY 6662684 ENCODE Processing Pipeline e54b64c6a6acb14134508fc5c8ce4087 https://www.encodeproject.org/files/ENCFF634YJK/@@download/ENCFF634YJK.bed.gz hg19 released low read depth ENCFF529GVQ bed narrowPeak conservative idr thresholded peaks ENCSR211LTF ChIP-seq EFO:0002067 K562 cell line Homo sapiens EGR1-human ENCAB899PTZ DNA False 2017-05-17 ENCODE 1, 2 ENCFF001TDO, ENCFF343JJX, ENCFF634YJK, ENCFF920IJY 487577 ENCODE Processing Pipeline b18946ccaf1da4ada50e3619780dfc68 https://www.encodeproject.org/files/ENCFF529GVQ/@@download/ENCFF529GVQ.bed.gz hg19 released low read depth ENCFF425RKJ bigBed narrowPeak optimal idr thresholded peaks ENCSR211LTF ChIP-seq EFO:0002067 K562 cell line Homo sapiens EGR1-human ENCAB899PTZ DNA False 2017-05-17 ENCODE 1, 2 ENCFF004WYV 1101382 ENCODE Processing Pipeline 38468dfb24e52b0c6d2b77d67acca934 https://www.encodeproject.org/files/ENCFF425RKJ/@@download/ENCFF425RKJ.bigBed hg19 released low read depth ENCFF192MWJ bigWig fold change over control ENCSR211LTF ChIP-seq EFO:0002067 K562 cell line Homo sapiens EGR1-human ENCAB899PTZ DNA False 2017-05-17 ENCODE 2 ENCFF051LWI, ENCFF293ZMY 1030920475 ENCODE Processing Pipeline c0d96abf4a34444b23b08427850b34ac https://www.encodeproject.org/files/ENCFF192MWJ/@@download/ENCFF192MWJ.bigWig hg19 released low read depth ENCFF343JJX bed narrowPeak peaks ENCSR211LTF ChIP-seq EFO:0002067 K562 cell line Homo sapiens EGR1-human ENCAB899PTZ DNA False 2017-05-17 ENCODE 1, 2 ENCFF051LWI, ENCFF065XRG, ENCFF293ZMY, ENCFF581ZJL 7206115 ENCODE Processing Pipeline cba0e2fa24564ec8b1cf8f14f0545dfe https://www.encodeproject.org/files/ENCFF343JJX/@@download/ENCFF343JJX.bed.gz hg19 released low read depth ENCFF908ZGK bigWig signal p-value ENCSR211LTF ChIP-seq EFO:0002067 K562 cell line Homo sapiens EGR1-human ENCAB899PTZ DNA False 2017-05-17 ENCODE 2 ENCFF051LWI, ENCFF293ZMY 996196427 ENCODE Processing Pipeline 4c6ec2c5df5b44671869ba438296000e https://www.encodeproject.org/files/ENCFF908ZGK/@@download/ENCFF908ZGK.bigWig hg19 released low read depth ENCFF954VHB bigWig signal p-value ENCSR211LTF ChIP-seq EFO:0002067 K562 cell line Homo sapiens EGR1-human ENCAB899PTZ DNA False 2017-05-17 ENCODE 1, 2 ENCFF051LWI, ENCFF065XRG, ENCFF293ZMY, ENCFF581ZJL 1867182111 ENCODE Processing Pipeline b477a757bf8b8398c1d1948ff5664ab1 https://www.encodeproject.org/files/ENCFF954VHB/@@download/ENCFF954VHB.bigWig hg19 released low read depth ENCFF032VMO bigBed narrowPeak peaks ENCSR211LTF ChIP-seq EFO:0002067 K562 cell line Homo sapiens EGR1-human ENCAB899PTZ DNA False 2017-05-17 ENCODE 2 ENCFF634YJK 13352476 ENCODE Processing Pipeline b4e1f31b6bebfad43b5e07050fb40ae6 https://www.encodeproject.org/files/ENCFF032VMO/@@download/ENCFF032VMO.bigBed hg19 released low read depth ENCFF223QPY bigBed narrowPeak conservative idr thresholded peaks ENCSR211LTF ChIP-seq EFO:0002067 K562 cell line Homo sapiens EGR1-human ENCAB899PTZ DNA False 2017-05-17 ENCODE 1, 2 ENCFF529GVQ 995241 ENCODE Processing Pipeline 9b4a93af9ee43c30bcbdebf94e51c3b1 https://www.encodeproject.org/files/ENCFF223QPY/@@download/ENCFF223QPY.bigBed hg19 released low read depth ENCFF004WYV bed narrowPeak optimal idr thresholded peaks ENCSR211LTF ChIP-seq EFO:0002067 K562 cell line Homo sapiens EGR1-human ENCAB899PTZ DNA False 2017-05-17 ENCODE 1, 2 ENCFF001TDO, ENCFF343JJX, ENCFF634YJK, ENCFF920IJY 557721 ENCODE Processing Pipeline f1a92ff86172ca7ec73d6ddfff66ecc4 https://www.encodeproject.org/files/ENCFF004WYV/@@download/ENCFF004WYV.bed.gz hg19 released low read depth ENCFF408XDP bam unfiltered alignments ENCSR632SHZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NFE2L1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1 100 ENCFF576NTQ, ENCFF686CXJ, ENCFF807MUK 5843185632 ENCODE Processing Pipeline 2b970bf6f9e195b33674a2adb649f8e0 https://www.encodeproject.org/files/ENCFF408XDP/@@download/ENCFF408XDP.bam hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF835OKA bam unfiltered alignments ENCSR632SHZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NFE2L1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 2 100 ENCFF226RVI, ENCFF657HVC, ENCFF807MUK 3547793928 ENCODE Processing Pipeline 0bb50228c74e58f7b788d56938e1d9c1 https://www.encodeproject.org/files/ENCFF835OKA/@@download/ENCFF835OKA.bam hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF576NTQ fastq reads ENCSR632SHZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NFE2L1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1 1 100 paired-ended 1 ENCFF686CXJ 2671105787 Michael Snyder, Stanford 682d8d1a9f47798139a2a32867c204dd SRA:SRR5111880 https://www.encodeproject.org/files/ENCFF576NTQ/@@download/ENCFF576NTQ.fastq.gz Illumina HiSeq 2000 /files/ENCFF563YDI/ released borderline replicate concordance, low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF686CXJ fastq reads ENCSR632SHZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NFE2L1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1 1 100 paired-ended 2 ENCFF576NTQ 2746392917 Michael Snyder, Stanford 009985f9d6f7942335c048a989bd6f01 SRA:SRR5111880 https://www.encodeproject.org/files/ENCFF686CXJ/@@download/ENCFF686CXJ.fastq.gz Illumina HiSeq 2000 /files/ENCFF527UFN/ released borderline replicate concordance, low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF226RVI fastq reads ENCSR632SHZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NFE2L1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 2 1 100 paired-ended 1 ENCFF657HVC 1718255114 Michael Snyder, Stanford e007214feb628febf7f09c7d9721bec8 SRA:SRR5111881 https://www.encodeproject.org/files/ENCFF226RVI/@@download/ENCFF226RVI.fastq.gz Illumina HiSeq 2000 /files/ENCFF563YDI/ released borderline replicate concordance, low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF657HVC fastq reads ENCSR632SHZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NFE2L1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 2 1 100 paired-ended 2 ENCFF226RVI 1754616546 Michael Snyder, Stanford 7954c2fa3125d93211d432d441ec5791 SRA:SRR5111881 https://www.encodeproject.org/files/ENCFF657HVC/@@download/ENCFF657HVC.fastq.gz Illumina HiSeq 2000 /files/ENCFF527UFN/ released borderline replicate concordance, low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF612OEV bam alignments ENCSR632SHZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NFE2L1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 2 100 ENCFF226RVI, ENCFF657HVC, ENCFF807MUK 2229989443 ENCODE Processing Pipeline 1a8fc0297f472f18b4e34fdb6c54afef https://www.encodeproject.org/files/ENCFF612OEV/@@download/ENCFF612OEV.bam hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF248TDS bam alignments ENCSR632SHZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NFE2L1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1 100 ENCFF576NTQ, ENCFF686CXJ, ENCFF807MUK 4431718464 ENCODE Processing Pipeline 0354240942e9476db91f6d0873a088e2 https://www.encodeproject.org/files/ENCFF248TDS/@@download/ENCFF248TDS.bam hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF811CHX bigWig signal p-value ENCSR632SHZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NFE2L1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1 ENCFF061ITH, ENCFF248TDS 1010531071 ENCODE Processing Pipeline 08648ccd4ef1fbd834ef25d14a090a51 https://www.encodeproject.org/files/ENCFF811CHX/@@download/ENCFF811CHX.bigWig hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF054GAR bigWig signal p-value ENCSR632SHZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NFE2L1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF061ITH, ENCFF248TDS, ENCFF612OEV 1220965073 ENCODE Processing Pipeline a4b95eb27ad8924f6e8b4fe2099900e7 https://www.encodeproject.org/files/ENCFF054GAR/@@download/ENCFF054GAR.bigWig hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF179IIL bigWig signal p-value ENCSR632SHZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NFE2L1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 2 ENCFF061ITH, ENCFF612OEV 877426260 ENCODE Processing Pipeline 1c0c0fc8a73b583ee3c0d49a3771d11a https://www.encodeproject.org/files/ENCFF179IIL/@@download/ENCFF179IIL.bigWig hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF597QZO bigWig fold change over control ENCSR632SHZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NFE2L1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1 ENCFF061ITH, ENCFF248TDS 1057141373 ENCODE Processing Pipeline 1570bc78e7ad43d4e55cc3920a6665af https://www.encodeproject.org/files/ENCFF597QZO/@@download/ENCFF597QZO.bigWig hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF004DKX bigWig fold change over control ENCSR632SHZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NFE2L1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 2 ENCFF061ITH, ENCFF612OEV 697429118 ENCODE Processing Pipeline e4eae63a415651352edd3ea829415de3 https://www.encodeproject.org/files/ENCFF004DKX/@@download/ENCFF004DKX.bigWig hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF627BPL bed narrowPeak peaks ENCSR632SHZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NFE2L1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1 ENCFF061ITH, ENCFF248TDS 5814015 ENCODE Processing Pipeline 8c7679a34fda59f121cf043aaec21874 https://www.encodeproject.org/files/ENCFF627BPL/@@download/ENCFF627BPL.bed.gz hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF167ABJ bigWig fold change over control ENCSR632SHZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NFE2L1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF061ITH, ENCFF248TDS, ENCFF612OEV 1375371736 ENCODE Processing Pipeline 69b062d038e2b1bf4e593f16f6247568 https://www.encodeproject.org/files/ENCFF167ABJ/@@download/ENCFF167ABJ.bigWig hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF771POP bed narrowPeak peaks ENCSR632SHZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NFE2L1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 2 ENCFF061ITH, ENCFF612OEV 5393271 ENCODE Processing Pipeline 3d5ccbf5d23405626938d5298e2ab55d https://www.encodeproject.org/files/ENCFF771POP/@@download/ENCFF771POP.bed.gz hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF054OPO bigBed narrowPeak peaks ENCSR632SHZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NFE2L1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1 ENCFF627BPL 11246870 ENCODE Processing Pipeline 7b3ee9faa8c6c907aceaf3d0fb06a9fe https://www.encodeproject.org/files/ENCFF054OPO/@@download/ENCFF054OPO.bigBed hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF210DGM bigBed narrowPeak peaks ENCSR632SHZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NFE2L1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF197SSW 11318731 ENCODE Processing Pipeline 44fc03c87b27d3814bf917277ed2e592 https://www.encodeproject.org/files/ENCFF210DGM/@@download/ENCFF210DGM.bigBed hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF944IDH bigBed narrowPeak peaks ENCSR632SHZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NFE2L1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 2 ENCFF771POP 11297636 ENCODE Processing Pipeline 1d59f8ffa0aefdc2e3a66c1243799eeb https://www.encodeproject.org/files/ENCFF944IDH/@@download/ENCFF944IDH.bigBed hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF197SSW bed narrowPeak peaks ENCSR632SHZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NFE2L1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF061ITH, ENCFF248TDS, ENCFF612OEV 6618308 ENCODE Processing Pipeline b541c750fffb322010bdc55c943f7fd6 https://www.encodeproject.org/files/ENCFF197SSW/@@download/ENCFF197SSW.bed.gz hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF383VZD bam unfiltered alignments ENCSR632SHZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NFE2L1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 2 100 ENCFF226RVI, ENCFF643CGH, ENCFF657HVC 3547693251 ENCODE Processing Pipeline 03427e61971d9a6c2afa080b2555c81d https://www.encodeproject.org/files/ENCFF383VZD/@@download/ENCFF383VZD.bam GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF700LWP bam unfiltered alignments ENCSR632SHZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NFE2L1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1 100 ENCFF576NTQ, ENCFF643CGH, ENCFF686CXJ 5850210068 ENCODE Processing Pipeline 2f5199e4e4029f7ecd2f91c1d6381e71 https://www.encodeproject.org/files/ENCFF700LWP/@@download/ENCFF700LWP.bam GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF027QPB bam alignments ENCSR632SHZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NFE2L1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 2 100 ENCFF226RVI, ENCFF643CGH, ENCFF657HVC 2231094102 ENCODE Processing Pipeline e7b065d1c84b3780c0d6d7f7261d6be4 https://www.encodeproject.org/files/ENCFF027QPB/@@download/ENCFF027QPB.bam GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF697TDR bam alignments ENCSR632SHZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NFE2L1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1 100 ENCFF576NTQ, ENCFF643CGH, ENCFF686CXJ 4435627022 ENCODE Processing Pipeline ecbc7fde430469c31a45749f89d3c183 https://www.encodeproject.org/files/ENCFF697TDR/@@download/ENCFF697TDR.bam GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF764YKN bigWig signal p-value ENCSR632SHZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NFE2L1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1 ENCFF172LMI, ENCFF697TDR 859866849 ENCODE Processing Pipeline 7c93069868a3925a4d4af0d1e37007fc https://www.encodeproject.org/files/ENCFF764YKN/@@download/ENCFF764YKN.bigWig GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF355ZSW bigWig signal p-value ENCSR632SHZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NFE2L1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 2 ENCFF027QPB, ENCFF172LMI 715066828 ENCODE Processing Pipeline b53fe85d2d199109fa8ac1e4dd2aed3d https://www.encodeproject.org/files/ENCFF355ZSW/@@download/ENCFF355ZSW.bigWig GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF236VWP bigWig signal p-value ENCSR632SHZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NFE2L1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF027QPB, ENCFF172LMI, ENCFF697TDR 1223094247 ENCODE Processing Pipeline 26c6db04c11beeb8c5d4cd569d280f0a https://www.encodeproject.org/files/ENCFF236VWP/@@download/ENCFF236VWP.bigWig GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF107GQE bigWig fold change over control ENCSR632SHZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NFE2L1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1 ENCFF172LMI, ENCFF697TDR 1051752455 ENCODE Processing Pipeline f6327838a50d4e130060b1983b8d37dc https://www.encodeproject.org/files/ENCFF107GQE/@@download/ENCFF107GQE.bigWig GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF006FKE bigWig fold change over control ENCSR632SHZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NFE2L1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 2 ENCFF027QPB, ENCFF172LMI 701611074 ENCODE Processing Pipeline 32ae0b0775dff3f79390c7f7ae9263b1 https://www.encodeproject.org/files/ENCFF006FKE/@@download/ENCFF006FKE.bigWig GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF893XQZ bigWig fold change over control ENCSR632SHZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NFE2L1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF027QPB, ENCFF172LMI, ENCFF697TDR 1378883619 ENCODE Processing Pipeline b207bff071a809017942b2aae48f0fc5 https://www.encodeproject.org/files/ENCFF893XQZ/@@download/ENCFF893XQZ.bigWig GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF036WLT bed narrowPeak peaks ENCSR632SHZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NFE2L1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF027QPB, ENCFF172LMI, ENCFF697TDR 6487631 ENCODE Processing Pipeline 6a9877e4e7402be4b22d943ea78e1bcb https://www.encodeproject.org/files/ENCFF036WLT/@@download/ENCFF036WLT.bed.gz GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF965PAJ bed narrowPeak peaks ENCSR632SHZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NFE2L1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1 ENCFF172LMI, ENCFF697TDR 5624139 ENCODE Processing Pipeline 596a06b3d80c2db7283c68849a1f18d2 https://www.encodeproject.org/files/ENCFF965PAJ/@@download/ENCFF965PAJ.bed.gz GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF618AYC bed narrowPeak peaks ENCSR632SHZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NFE2L1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 2 ENCFF027QPB, ENCFF172LMI 5214328 ENCODE Processing Pipeline 2f31d75de475baa141c1f14b50defc92 https://www.encodeproject.org/files/ENCFF618AYC/@@download/ENCFF618AYC.bed.gz GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF151XIQ bigBed narrowPeak peaks ENCSR632SHZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NFE2L1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1 ENCFF965PAJ 11243983 ENCODE Processing Pipeline 7729b39b2b2324a0bf1e04aebfcaff5d https://www.encodeproject.org/files/ENCFF151XIQ/@@download/ENCFF151XIQ.bigBed GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF584ZWQ bigBed narrowPeak peaks ENCSR632SHZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NFE2L1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 2 ENCFF618AYC 11254788 ENCODE Processing Pipeline b0fbc4b138dbcc74e6535b9398cfc5bf https://www.encodeproject.org/files/ENCFF584ZWQ/@@download/ENCFF584ZWQ.bigBed GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF671YEU bed narrowPeak conservative idr thresholded peaks ENCSR632SHZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NFE2L1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF036WLT, ENCFF419RSJ, ENCFF618AYC, ENCFF965PAJ 92544 ENCODE Processing Pipeline 74c3e5e5af4dc07e2646029ddfea9492 https://www.encodeproject.org/files/ENCFF671YEU/@@download/ENCFF671YEU.bed.gz GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF411JLJ bigBed narrowPeak peaks ENCSR632SHZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NFE2L1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF036WLT 11312622 ENCODE Processing Pipeline e5acb86f494e1c662c4411c6c6f08d68 https://www.encodeproject.org/files/ENCFF411JLJ/@@download/ENCFF411JLJ.bigBed GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF592SAM bigBed narrowPeak conservative idr thresholded peaks ENCSR632SHZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NFE2L1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF671YEU 212635 ENCODE Processing Pipeline 7c9256c5db0c7f09276861b4681740b9 https://www.encodeproject.org/files/ENCFF592SAM/@@download/ENCFF592SAM.bigBed GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF462UJN bed narrowPeak optimal idr thresholded peaks ENCSR632SHZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NFE2L1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF036WLT, ENCFF419RSJ, ENCFF618AYC, ENCFF965PAJ 134560 ENCODE Processing Pipeline 0957a51663a33df2a2c21557e67817b1 https://www.encodeproject.org/files/ENCFF462UJN/@@download/ENCFF462UJN.bed.gz GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF385NYZ bigBed narrowPeak optimal idr thresholded peaks ENCSR632SHZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NFE2L1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF462UJN 269980 ENCODE Processing Pipeline f1583e411494110e11c341d02875dda3 https://www.encodeproject.org/files/ENCFF385NYZ/@@download/ENCFF385NYZ.bigBed GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF175IUO bed narrowPeak optimal idr thresholded peaks ENCSR632SHZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NFE2L1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF001TDO, ENCFF197SSW, ENCFF627BPL, ENCFF771POP 115143 ENCODE Processing Pipeline 1da9412addcc8fdacab4a65d0a9098ce https://www.encodeproject.org/files/ENCFF175IUO/@@download/ENCFF175IUO.bed.gz hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF625IYZ bed narrowPeak conservative idr thresholded peaks ENCSR632SHZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NFE2L1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF001TDO, ENCFF197SSW, ENCFF627BPL, ENCFF771POP 80810 ENCODE Processing Pipeline 1c6ae16b5a084d64eaf41776e98d524f https://www.encodeproject.org/files/ENCFF625IYZ/@@download/ENCFF625IYZ.bed.gz hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF737IHD bigBed narrowPeak conservative idr thresholded peaks ENCSR632SHZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NFE2L1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF625IYZ 194343 ENCODE Processing Pipeline 0b71ac85275fbe4f54470c166c5ba8d5 https://www.encodeproject.org/files/ENCFF737IHD/@@download/ENCFF737IHD.bigBed hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF799JIT bigBed narrowPeak optimal idr thresholded peaks ENCSR632SHZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NFE2L1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF175IUO 239558 ENCODE Processing Pipeline 8cdfaa993290699915067963320c7e9a https://www.encodeproject.org/files/ENCFF799JIT/@@download/ENCFF799JIT.bigBed hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF452YKY fastq reads ENCSR928KOR ChIP-seq EFO:0002067 K562 cell line Homo sapiens GMEB1-human ENCAB054XFU DNA False 2018-01-26 ENCODE 2 1 100 paired-ended 2 ENCFF833EAO 3086681120 Michael Snyder, Stanford c4a735fd6508ec3ea3dd156cfb9f92a1 https://www.encodeproject.org/files/ENCFF452YKY/@@download/ENCFF452YKY.fastq.gz Illumina HiSeq 4000 /files/ENCFF502GTS/ released experiment not submitted to GEO partially characterized antibody ENCFF827LCX fastq reads ENCSR928KOR ChIP-seq EFO:0002067 K562 cell line Homo sapiens GMEB1-human ENCAB054XFU DNA False 2018-01-26 ENCODE 1 1 100 paired-ended 1 ENCFF696QAK 3478300822 Michael Snyder, Stanford 30cfd9c08ec5009812e22c98aed6cd93 https://www.encodeproject.org/files/ENCFF827LCX/@@download/ENCFF827LCX.fastq.gz Illumina HiSeq 4000 /files/ENCFF259GQA/ released experiment not submitted to GEO partially characterized antibody ENCFF696QAK fastq reads ENCSR928KOR ChIP-seq EFO:0002067 K562 cell line Homo sapiens GMEB1-human ENCAB054XFU DNA False 2018-01-26 ENCODE 1 1 100 paired-ended 2 ENCFF827LCX 3835350080 Michael Snyder, Stanford a0bc39c81a67a849f2f0532ade715f98 https://www.encodeproject.org/files/ENCFF696QAK/@@download/ENCFF696QAK.fastq.gz Illumina HiSeq 4000 /files/ENCFF837MIV/ released experiment not submitted to GEO partially characterized antibody ENCFF833EAO fastq reads ENCSR928KOR ChIP-seq EFO:0002067 K562 cell line Homo sapiens GMEB1-human ENCAB054XFU DNA False 2018-01-26 ENCODE 2 1 100 paired-ended 1 ENCFF452YKY 2819631272 Michael Snyder, Stanford 29d1d6a654ea007abea0ff1710b5114b https://www.encodeproject.org/files/ENCFF833EAO/@@download/ENCFF833EAO.fastq.gz Illumina HiSeq 4000 /files/ENCFF498JMO/ released experiment not submitted to GEO partially characterized antibody ENCFF867OBK bam unfiltered alignments ENCSR928KOR ChIP-seq EFO:0002067 K562 cell line Homo sapiens GMEB1-human ENCAB054XFU DNA False 2018-01-26 ENCODE 2 100 ENCFF452YKY, ENCFF807MUK, ENCFF833EAO 5799556792 ENCODE Processing Pipeline 6dd39c5adc77f06a4331e12c16295f45 https://www.encodeproject.org/files/ENCFF867OBK/@@download/ENCFF867OBK.bam hg19 released experiment not submitted to GEO partially characterized antibody ENCFF979TXQ bam unfiltered alignments ENCSR928KOR ChIP-seq EFO:0002067 K562 cell line Homo sapiens GMEB1-human ENCAB054XFU DNA False 2018-01-26 ENCODE 2 100 ENCFF452YKY, ENCFF643CGH, ENCFF833EAO 5806772599 ENCODE Processing Pipeline 1afe455731d2eeb2f2f1516fd3470514 https://www.encodeproject.org/files/ENCFF979TXQ/@@download/ENCFF979TXQ.bam GRCh38 released experiment not submitted to GEO partially characterized antibody ENCFF134JUN bam unfiltered alignments ENCSR928KOR ChIP-seq EFO:0002067 K562 cell line Homo sapiens GMEB1-human ENCAB054XFU DNA False 2018-01-26 ENCODE 1 100 ENCFF643CGH, ENCFF696QAK, ENCFF827LCX 7164140590 ENCODE Processing Pipeline 13e2b21dbdf54000616f7a1e9ba33dcb https://www.encodeproject.org/files/ENCFF134JUN/@@download/ENCFF134JUN.bam GRCh38 released experiment not submitted to GEO partially characterized antibody ENCFF809QWF bam unfiltered alignments ENCSR928KOR ChIP-seq EFO:0002067 K562 cell line Homo sapiens GMEB1-human ENCAB054XFU DNA False 2018-01-26 ENCODE 1 100 ENCFF696QAK, ENCFF807MUK, ENCFF827LCX 7155687766 ENCODE Processing Pipeline d22a45f7f7a7b0040ed529184adac9a0 https://www.encodeproject.org/files/ENCFF809QWF/@@download/ENCFF809QWF.bam hg19 released experiment not submitted to GEO partially characterized antibody ENCFF924YHD bam alignments ENCSR928KOR ChIP-seq EFO:0002067 K562 cell line Homo sapiens GMEB1-human ENCAB054XFU DNA False 2018-01-26 ENCODE 2 100 ENCFF452YKY, ENCFF643CGH, ENCFF833EAO 4629594085 ENCODE Processing Pipeline dc43918953373224ee276804448c14e7 https://www.encodeproject.org/files/ENCFF924YHD/@@download/ENCFF924YHD.bam GRCh38 released experiment not submitted to GEO partially characterized antibody ENCFF576JOB bam alignments ENCSR928KOR ChIP-seq EFO:0002067 K562 cell line Homo sapiens GMEB1-human ENCAB054XFU DNA False 2018-01-26 ENCODE 2 100 ENCFF452YKY, ENCFF807MUK, ENCFF833EAO 4625809239 ENCODE Processing Pipeline 2e08e8b5eb91abb85f09d0e6f97a8b27 https://www.encodeproject.org/files/ENCFF576JOB/@@download/ENCFF576JOB.bam hg19 released experiment not submitted to GEO partially characterized antibody ENCFF395KST bam alignments ENCSR928KOR ChIP-seq EFO:0002067 K562 cell line Homo sapiens GMEB1-human ENCAB054XFU DNA False 2018-01-26 ENCODE 1 100 ENCFF696QAK, ENCFF807MUK, ENCFF827LCX 5784087469 ENCODE Processing Pipeline 42f500d35f08b324c0a62412d080a120 https://www.encodeproject.org/files/ENCFF395KST/@@download/ENCFF395KST.bam hg19 released experiment not submitted to GEO partially characterized antibody ENCFF942XRZ bam alignments ENCSR928KOR ChIP-seq EFO:0002067 K562 cell line Homo sapiens GMEB1-human ENCAB054XFU DNA False 2018-01-26 ENCODE 1 100 ENCFF643CGH, ENCFF696QAK, ENCFF827LCX 5788990216 ENCODE Processing Pipeline 8e5d84773c00b185e95a1cf134b39027 https://www.encodeproject.org/files/ENCFF942XRZ/@@download/ENCFF942XRZ.bam GRCh38 released experiment not submitted to GEO partially characterized antibody ENCFF879VSI bigWig signal p-value ENCSR928KOR ChIP-seq EFO:0002067 K562 cell line Homo sapiens GMEB1-human ENCAB054XFU DNA False 2018-01-26 ENCODE 1 ENCFF160VXC, ENCFF395KST, ENCFF834TUP 1797257925 ENCODE Processing Pipeline 7ca5de068a61c9473f20f7e3ec9a2f0f https://www.encodeproject.org/files/ENCFF879VSI/@@download/ENCFF879VSI.bigWig hg19 released experiment not submitted to GEO partially characterized antibody ENCFF231VBI bigWig signal p-value ENCSR928KOR ChIP-seq EFO:0002067 K562 cell line Homo sapiens GMEB1-human ENCAB054XFU DNA False 2018-01-26 ENCODE 2 ENCFF160VXC, ENCFF576JOB 1338450612 ENCODE Processing Pipeline 1610bc7036084ed4e62a28ef9dd35f46 https://www.encodeproject.org/files/ENCFF231VBI/@@download/ENCFF231VBI.bigWig hg19 released experiment not submitted to GEO partially characterized antibody ENCFF544PFY bigWig signal p-value ENCSR928KOR ChIP-seq EFO:0002067 K562 cell line Homo sapiens GMEB1-human ENCAB054XFU DNA False 2018-01-26 ENCODE 1, 2 ENCFF160VXC, ENCFF395KST, ENCFF576JOB, ENCFF834TUP 2152726796 ENCODE Processing Pipeline 9395fbd9445faf9c03b3322667265811 https://www.encodeproject.org/files/ENCFF544PFY/@@download/ENCFF544PFY.bigWig hg19 released experiment not submitted to GEO partially characterized antibody ENCFF888IZC bigWig fold change over control ENCSR928KOR ChIP-seq EFO:0002067 K562 cell line Homo sapiens GMEB1-human ENCAB054XFU DNA False 2018-01-26 ENCODE 1 ENCFF160VXC, ENCFF395KST, ENCFF834TUP 1991866536 ENCODE Processing Pipeline 0faaf614b71afe16762c501045d3e934 https://www.encodeproject.org/files/ENCFF888IZC/@@download/ENCFF888IZC.bigWig hg19 released experiment not submitted to GEO partially characterized antibody ENCFF945CSE bigWig fold change over control ENCSR928KOR ChIP-seq EFO:0002067 K562 cell line Homo sapiens GMEB1-human ENCAB054XFU DNA False 2018-01-26 ENCODE 2 ENCFF160VXC, ENCFF576JOB 1418325867 ENCODE Processing Pipeline 053a742e575b41f6a9da8f7d7235049c https://www.encodeproject.org/files/ENCFF945CSE/@@download/ENCFF945CSE.bigWig hg19 released experiment not submitted to GEO partially characterized antibody ENCFF306QAA bigWig fold change over control ENCSR928KOR ChIP-seq EFO:0002067 K562 cell line Homo sapiens GMEB1-human ENCAB054XFU DNA False 2018-01-26 ENCODE 1, 2 ENCFF160VXC, ENCFF395KST, ENCFF576JOB, ENCFF834TUP 2473811404 ENCODE Processing Pipeline 5b4ea2dfbc936df34f8fc19fe3fa63a9 https://www.encodeproject.org/files/ENCFF306QAA/@@download/ENCFF306QAA.bigWig hg19 released experiment not submitted to GEO partially characterized antibody ENCFF154QJU bed narrowPeak peaks ENCSR928KOR ChIP-seq EFO:0002067 K562 cell line Homo sapiens GMEB1-human ENCAB054XFU DNA False 2018-01-26 ENCODE 1 ENCFF160VXC, ENCFF395KST, ENCFF834TUP 7279922 ENCODE Processing Pipeline be6739a8f963d3d5d5c3b71cd6711c23 https://www.encodeproject.org/files/ENCFF154QJU/@@download/ENCFF154QJU.bed.gz hg19 released experiment not submitted to GEO partially characterized antibody ENCFF369BMF bed narrowPeak peaks ENCSR928KOR ChIP-seq EFO:0002067 K562 cell line Homo sapiens GMEB1-human ENCAB054XFU DNA False 2018-01-26 ENCODE 2 ENCFF160VXC, ENCFF576JOB 7159010 ENCODE Processing Pipeline 6bbd56ec9d30ee5b868b01dad1cd4061 https://www.encodeproject.org/files/ENCFF369BMF/@@download/ENCFF369BMF.bed.gz hg19 released experiment not submitted to GEO partially characterized antibody ENCFF942IAL bed narrowPeak peaks ENCSR928KOR ChIP-seq EFO:0002067 K562 cell line Homo sapiens GMEB1-human ENCAB054XFU DNA False 2018-01-26 ENCODE 1, 2 ENCFF160VXC, ENCFF395KST, ENCFF576JOB, ENCFF834TUP 7305116 ENCODE Processing Pipeline 773b1d90a2492e276a9e719e409a444c https://www.encodeproject.org/files/ENCFF942IAL/@@download/ENCFF942IAL.bed.gz hg19 released experiment not submitted to GEO partially characterized antibody ENCFF946JXP bigBed narrowPeak peaks ENCSR928KOR ChIP-seq EFO:0002067 K562 cell line Homo sapiens GMEB1-human ENCAB054XFU DNA False 2018-01-26 ENCODE 1 ENCFF154QJU 13005350 ENCODE Processing Pipeline 1b2442899a1bdec2d2a5fc82c854e615 https://www.encodeproject.org/files/ENCFF946JXP/@@download/ENCFF946JXP.bigBed hg19 released experiment not submitted to GEO partially characterized antibody ENCFF377RDJ bigBed narrowPeak peaks ENCSR928KOR ChIP-seq EFO:0002067 K562 cell line Homo sapiens GMEB1-human ENCAB054XFU DNA False 2018-01-26 ENCODE 2 ENCFF369BMF 13028606 ENCODE Processing Pipeline 8c088c2ce2c4de18717f9fa7d93e15a7 https://www.encodeproject.org/files/ENCFF377RDJ/@@download/ENCFF377RDJ.bigBed hg19 released experiment not submitted to GEO partially characterized antibody ENCFF714EKC bigBed narrowPeak conservative idr thresholded peaks ENCSR928KOR ChIP-seq EFO:0002067 K562 cell line Homo sapiens GMEB1-human ENCAB054XFU DNA False 2018-01-26 ENCODE 1, 2 ENCFF815MOP 1055886 ENCODE Processing Pipeline 65d7c64e3b5b338575309deaaf599f5b https://www.encodeproject.org/files/ENCFF714EKC/@@download/ENCFF714EKC.bigBed hg19 released experiment not submitted to GEO partially characterized antibody ENCFF237MEA bigBed narrowPeak peaks ENCSR928KOR ChIP-seq EFO:0002067 K562 cell line Homo sapiens GMEB1-human ENCAB054XFU DNA False 2018-01-26 ENCODE 1, 2 ENCFF942IAL 12882607 ENCODE Processing Pipeline 50ff2831cc406a4cfefb3091744389c0 https://www.encodeproject.org/files/ENCFF237MEA/@@download/ENCFF237MEA.bigBed hg19 released experiment not submitted to GEO partially characterized antibody ENCFF815MOP bed narrowPeak conservative idr thresholded peaks ENCSR928KOR ChIP-seq EFO:0002067 K562 cell line Homo sapiens GMEB1-human ENCAB054XFU DNA False 2018-01-26 ENCODE 1, 2 ENCFF001TDO, ENCFF154QJU, ENCFF369BMF, ENCFF942IAL 451957 ENCODE Processing Pipeline 4eb81cbca355973f9ee49cc6d1ffebab https://www.encodeproject.org/files/ENCFF815MOP/@@download/ENCFF815MOP.bed.gz hg19 released experiment not submitted to GEO partially characterized antibody ENCFF126BCK bed narrowPeak optimal idr thresholded peaks ENCSR928KOR ChIP-seq EFO:0002067 K562 cell line Homo sapiens GMEB1-human ENCAB054XFU DNA False 2018-01-26 ENCODE 1, 2 ENCFF001TDO, ENCFF154QJU, ENCFF369BMF, ENCFF942IAL 511446 ENCODE Processing Pipeline 8d0ce916d80715cec4752c1a6f79bd30 https://www.encodeproject.org/files/ENCFF126BCK/@@download/ENCFF126BCK.bed.gz hg19 released experiment not submitted to GEO partially characterized antibody ENCFF271RQC bigBed narrowPeak optimal idr thresholded peaks ENCSR928KOR ChIP-seq EFO:0002067 K562 cell line Homo sapiens GMEB1-human ENCAB054XFU DNA False 2018-01-26 ENCODE 1, 2 ENCFF126BCK 1162183 ENCODE Processing Pipeline e205110069e928a954868950b2a6f264 https://www.encodeproject.org/files/ENCFF271RQC/@@download/ENCFF271RQC.bigBed hg19 released experiment not submitted to GEO partially characterized antibody ENCFF284CIW bigWig signal p-value ENCSR928KOR ChIP-seq EFO:0002067 K562 cell line Homo sapiens GMEB1-human ENCAB054XFU DNA False 2018-01-26 ENCODE 1 ENCFF712WXB, ENCFF790TAN, ENCFF942XRZ 1888512691 ENCODE Processing Pipeline bc161677a59a1a78374595cd33addd74 https://www.encodeproject.org/files/ENCFF284CIW/@@download/ENCFF284CIW.bigWig GRCh38 released experiment not submitted to GEO partially characterized antibody ENCFF662GMS bigWig signal p-value ENCSR928KOR ChIP-seq EFO:0002067 K562 cell line Homo sapiens GMEB1-human ENCAB054XFU DNA False 2018-01-26 ENCODE 2 ENCFF790TAN, ENCFF924YHD 1216282722 ENCODE Processing Pipeline fdef41eb71e958684c41831a0681cd6d https://www.encodeproject.org/files/ENCFF662GMS/@@download/ENCFF662GMS.bigWig GRCh38 released experiment not submitted to GEO partially characterized antibody ENCFF398IIR bigWig signal p-value ENCSR928KOR ChIP-seq EFO:0002067 K562 cell line Homo sapiens GMEB1-human ENCAB054XFU DNA False 2018-01-26 ENCODE 1, 2 ENCFF712WXB, ENCFF790TAN, ENCFF924YHD, ENCFF942XRZ 1941122438 ENCODE Processing Pipeline dfc1826c3630ef2eefff16d6be26553d https://www.encodeproject.org/files/ENCFF398IIR/@@download/ENCFF398IIR.bigWig GRCh38 released experiment not submitted to GEO partially characterized antibody ENCFF468TWU bigWig fold change over control ENCSR928KOR ChIP-seq EFO:0002067 K562 cell line Homo sapiens GMEB1-human ENCAB054XFU DNA False 2018-01-26 ENCODE 1 ENCFF712WXB, ENCFF790TAN, ENCFF942XRZ 2011978860 ENCODE Processing Pipeline a50863165f424c06cce41212079207c4 https://www.encodeproject.org/files/ENCFF468TWU/@@download/ENCFF468TWU.bigWig GRCh38 released experiment not submitted to GEO partially characterized antibody ENCFF859PBF bigWig fold change over control ENCSR928KOR ChIP-seq EFO:0002067 K562 cell line Homo sapiens GMEB1-human ENCAB054XFU DNA False 2018-01-26 ENCODE 2 ENCFF790TAN, ENCFF924YHD 1406165789 ENCODE Processing Pipeline cbcce0546479da87b8305f17161493be https://www.encodeproject.org/files/ENCFF859PBF/@@download/ENCFF859PBF.bigWig GRCh38 released experiment not submitted to GEO partially characterized antibody ENCFF015ZEB bigWig fold change over control ENCSR928KOR ChIP-seq EFO:0002067 K562 cell line Homo sapiens GMEB1-human ENCAB054XFU DNA False 2018-01-26 ENCODE 1, 2 ENCFF712WXB, ENCFF790TAN, ENCFF924YHD, ENCFF942XRZ 2496788061 ENCODE Processing Pipeline 24a3a18273b89a84a2c0b43c8dbd38b4 https://www.encodeproject.org/files/ENCFF015ZEB/@@download/ENCFF015ZEB.bigWig GRCh38 released experiment not submitted to GEO partially characterized antibody ENCFF574QJU bed narrowPeak peaks ENCSR928KOR ChIP-seq EFO:0002067 K562 cell line Homo sapiens GMEB1-human ENCAB054XFU DNA False 2018-01-26 ENCODE 1 ENCFF712WXB, ENCFF790TAN, ENCFF942XRZ 7251274 ENCODE Processing Pipeline 36233bebb2b277190dd5be613347d2f9 https://www.encodeproject.org/files/ENCFF574QJU/@@download/ENCFF574QJU.bed.gz GRCh38 released experiment not submitted to GEO partially characterized antibody ENCFF574QMQ bigBed narrowPeak peaks ENCSR928KOR ChIP-seq EFO:0002067 K562 cell line Homo sapiens GMEB1-human ENCAB054XFU DNA False 2018-01-26 ENCODE 1 ENCFF574QJU 12990140 ENCODE Processing Pipeline 8ed5caabf18a5b2ac45aaad50980e7c7 https://www.encodeproject.org/files/ENCFF574QMQ/@@download/ENCFF574QMQ.bigBed GRCh38 released experiment not submitted to GEO partially characterized antibody ENCFF137CIP bed narrowPeak peaks ENCSR928KOR ChIP-seq EFO:0002067 K562 cell line Homo sapiens GMEB1-human ENCAB054XFU DNA False 2018-01-26 ENCODE 2 ENCFF790TAN, ENCFF924YHD 7119772 ENCODE Processing Pipeline b5c4fb5ae985342f6439b148bf1bdf97 https://www.encodeproject.org/files/ENCFF137CIP/@@download/ENCFF137CIP.bed.gz GRCh38 released experiment not submitted to GEO partially characterized antibody ENCFF155ICS bed narrowPeak peaks ENCSR928KOR ChIP-seq EFO:0002067 K562 cell line Homo sapiens GMEB1-human ENCAB054XFU DNA False 2018-01-26 ENCODE 1, 2 ENCFF712WXB, ENCFF790TAN, ENCFF924YHD, ENCFF942XRZ 7310382 ENCODE Processing Pipeline 06ce6cabf8960e9f8b97410cf3eac954 https://www.encodeproject.org/files/ENCFF155ICS/@@download/ENCFF155ICS.bed.gz GRCh38 released experiment not submitted to GEO partially characterized antibody ENCFF058FJN bed narrowPeak conservative idr thresholded peaks ENCSR928KOR ChIP-seq EFO:0002067 K562 cell line Homo sapiens GMEB1-human ENCAB054XFU DNA False 2018-01-26 ENCODE 1, 2 ENCFF137CIP, ENCFF155ICS, ENCFF419RSJ, ENCFF574QJU 452519 ENCODE Processing Pipeline e19125ab09059fb0a8dbd426ba772eb4 https://www.encodeproject.org/files/ENCFF058FJN/@@download/ENCFF058FJN.bed.gz GRCh38 released experiment not submitted to GEO partially characterized antibody ENCFF335FAM bigBed narrowPeak conservative idr thresholded peaks ENCSR928KOR ChIP-seq EFO:0002067 K562 cell line Homo sapiens GMEB1-human ENCAB054XFU DNA False 2018-01-26 ENCODE 1, 2 ENCFF058FJN 1060091 ENCODE Processing Pipeline 6090db3e90e4fdd8d065b6bd4de0d554 https://www.encodeproject.org/files/ENCFF335FAM/@@download/ENCFF335FAM.bigBed GRCh38 released experiment not submitted to GEO partially characterized antibody ENCFF634WMB bigBed narrowPeak peaks ENCSR928KOR ChIP-seq EFO:0002067 K562 cell line Homo sapiens GMEB1-human ENCAB054XFU DNA False 2018-01-26 ENCODE 2 ENCFF137CIP 13041686 ENCODE Processing Pipeline f3f3d6aadbde600e97e93cd9793e9a15 https://www.encodeproject.org/files/ENCFF634WMB/@@download/ENCFF634WMB.bigBed GRCh38 released experiment not submitted to GEO partially characterized antibody ENCFF177OTF bigBed narrowPeak peaks ENCSR928KOR ChIP-seq EFO:0002067 K562 cell line Homo sapiens GMEB1-human ENCAB054XFU DNA False 2018-01-26 ENCODE 1, 2 ENCFF155ICS 12894104 ENCODE Processing Pipeline d754968604d0c5cf2bbc944eff792b3a https://www.encodeproject.org/files/ENCFF177OTF/@@download/ENCFF177OTF.bigBed GRCh38 released experiment not submitted to GEO partially characterized antibody ENCFF678VPQ bed narrowPeak optimal idr thresholded peaks ENCSR928KOR ChIP-seq EFO:0002067 K562 cell line Homo sapiens GMEB1-human ENCAB054XFU DNA False 2018-01-26 ENCODE 1, 2 ENCFF137CIP, ENCFF155ICS, ENCFF419RSJ, ENCFF574QJU 504173 ENCODE Processing Pipeline 7fd98e2b51c3f809d13313460b8c418b https://www.encodeproject.org/files/ENCFF678VPQ/@@download/ENCFF678VPQ.bed.gz GRCh38 released experiment not submitted to GEO partially characterized antibody ENCFF965VTE bigBed narrowPeak optimal idr thresholded peaks ENCSR928KOR ChIP-seq EFO:0002067 K562 cell line Homo sapiens GMEB1-human ENCAB054XFU DNA False 2018-01-26 ENCODE 1, 2 ENCFF678VPQ 1154446 ENCODE Processing Pipeline 0aa3a64f0bc41c5d84c84df359279ab7 https://www.encodeproject.org/files/ENCFF965VTE/@@download/ENCFF965VTE.bigBed GRCh38 released experiment not submitted to GEO partially characterized antibody ENCFF484TAP fastq reads ENCSR871TKJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens THRAP3-human ENCAB212EPQ DNA False 2016-11-17 ENCODE 2 1 100 paired-ended 1 ENCFF251TJX 4569138606 Michael Snyder, Stanford b0ec5bbf8e5bc6b93fc4a4f3f4877124 SRA:SRR5112190 https://www.encodeproject.org/files/ENCFF484TAP/@@download/ENCFF484TAP.fastq.gz Illumina HiSeq 4000 /files/ENCFF259GQA/ released borderline replicate concordance, inconsistent platforms, mild to moderate bottlenecking missing control alignments ENCFF251TJX fastq reads ENCSR871TKJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens THRAP3-human ENCAB212EPQ DNA False 2016-11-17 ENCODE 2 1 100 paired-ended 2 ENCFF484TAP 4830912444 Michael Snyder, Stanford f36141250a4024be345e5a09c88a52a1 SRA:SRR5112190 https://www.encodeproject.org/files/ENCFF251TJX/@@download/ENCFF251TJX.fastq.gz Illumina HiSeq 4000 /files/ENCFF837MIV/ released borderline replicate concordance, inconsistent platforms, mild to moderate bottlenecking missing control alignments ENCFF501VTR fastq reads ENCSR871TKJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens THRAP3-human ENCAB212EPQ DNA False 2016-11-17 ENCODE 1 1 100 paired-ended 1 ENCFF025VPM 2207236986 Michael Snyder, Stanford afcb03df761fdd21141263891ac1f592 https://www.encodeproject.org/files/ENCFF501VTR/@@download/ENCFF501VTR.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFF/ archived borderline replicate concordance, inconsistent platforms, mild to moderate bottlenecking missing control alignments ENCFF025VPM fastq reads ENCSR871TKJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens THRAP3-human ENCAB212EPQ DNA False 2016-11-17 ENCODE 1 1 100 paired-ended 2 ENCFF501VTR 2177748356 Michael Snyder, Stanford b10148c1cb08e7a2c5db7d291d04fabc https://www.encodeproject.org/files/ENCFF025VPM/@@download/ENCFF025VPM.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFH/ archived borderline replicate concordance, inconsistent platforms, mild to moderate bottlenecking missing control alignments ENCFF814WTW fastq reads ENCSR871TKJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens THRAP3-human ENCAB212EPQ DNA False 2016-11-17 ENCODE 1 1 100 paired-ended 1 ENCFF975CDD 4035002209 Michael Snyder, Stanford 3cf9c0f2b6b9108b720cef894124b834 SRA:SRR5112189 https://www.encodeproject.org/files/ENCFF814WTW/@@download/ENCFF814WTW.fastq.gz Illumina HiSeq 4000 /files/ENCFF498JMO/ released borderline replicate concordance, inconsistent platforms, mild to moderate bottlenecking missing control alignments ENCFF975CDD fastq reads ENCSR871TKJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens THRAP3-human ENCAB212EPQ DNA False 2016-11-17 ENCODE 1 1 100 paired-ended 2 ENCFF814WTW 4661242833 Michael Snyder, Stanford 5ee6300243bd42aa5c5994dfd9819c86 SRA:SRR5112189 https://www.encodeproject.org/files/ENCFF975CDD/@@download/ENCFF975CDD.fastq.gz Illumina HiSeq 4000 /files/ENCFF502GTS/ released borderline replicate concordance, inconsistent platforms, mild to moderate bottlenecking missing control alignments ENCFF561FQQ bam unfiltered alignments ENCSR871TKJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens THRAP3-human ENCAB212EPQ DNA False 2016-11-17 ENCODE 2 100 ENCFF251TJX, ENCFF484TAP, ENCFF643CGH 8656724242 ENCODE Processing Pipeline 48203f8d0baae7ff8abcb2e54be4bb6a https://www.encodeproject.org/files/ENCFF561FQQ/@@download/ENCFF561FQQ.bam GRCh38 released borderline replicate concordance, inconsistent platforms, mild to moderate bottlenecking missing control alignments ENCFF433NZX bam unfiltered alignments ENCSR871TKJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens THRAP3-human ENCAB212EPQ DNA False 2016-11-17 ENCODE 1 100 ENCFF807MUK, ENCFF814WTW, ENCFF975CDD 8169597670 ENCODE Processing Pipeline 7bbe232b76791cfca843ac753c3401c6 https://www.encodeproject.org/files/ENCFF433NZX/@@download/ENCFF433NZX.bam hg19 released borderline replicate concordance, inconsistent platforms, mild to moderate bottlenecking missing control alignments ENCFF521ZUC bam unfiltered alignments ENCSR871TKJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens THRAP3-human ENCAB212EPQ DNA False 2016-11-17 ENCODE 1 100 ENCFF643CGH, ENCFF814WTW, ENCFF975CDD 8177889549 ENCODE Processing Pipeline f093d1fce844dc79716464a2abbdb5ac https://www.encodeproject.org/files/ENCFF521ZUC/@@download/ENCFF521ZUC.bam GRCh38 released borderline replicate concordance, inconsistent platforms, mild to moderate bottlenecking missing control alignments ENCFF404KGA bam unfiltered alignments ENCSR871TKJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens THRAP3-human ENCAB212EPQ DNA False 2016-11-17 ENCODE 2 100 ENCFF251TJX, ENCFF484TAP, ENCFF807MUK 8648450796 ENCODE Processing Pipeline a78d490ce3aeedd1202ba2d5bb6e0b9c https://www.encodeproject.org/files/ENCFF404KGA/@@download/ENCFF404KGA.bam hg19 released borderline replicate concordance, inconsistent platforms, mild to moderate bottlenecking missing control alignments ENCFF713FNS bam alignments ENCSR871TKJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens THRAP3-human ENCAB212EPQ DNA False 2016-11-17 ENCODE 1 100 ENCFF807MUK, ENCFF814WTW, ENCFF975CDD 6351554405 ENCODE Processing Pipeline 5c8058cb4ea2ee6ac4f3f2e0b286814e https://www.encodeproject.org/files/ENCFF713FNS/@@download/ENCFF713FNS.bam hg19 released borderline replicate concordance, inconsistent platforms, mild to moderate bottlenecking missing control alignments ENCFF406TJQ bam alignments ENCSR871TKJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens THRAP3-human ENCAB212EPQ DNA False 2016-11-17 ENCODE 2 100 ENCFF251TJX, ENCFF484TAP, ENCFF643CGH 6407032095 ENCODE Processing Pipeline 18a0c9d6a47a554c9772b70dc05bc07b https://www.encodeproject.org/files/ENCFF406TJQ/@@download/ENCFF406TJQ.bam GRCh38 released borderline replicate concordance, inconsistent platforms, mild to moderate bottlenecking missing control alignments ENCFF446HGS bam alignments ENCSR871TKJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens THRAP3-human ENCAB212EPQ DNA False 2016-11-17 ENCODE 1 100 ENCFF643CGH, ENCFF814WTW, ENCFF975CDD 6356564725 ENCODE Processing Pipeline 2168631538bd99fb02c79dc3a9a1b398 https://www.encodeproject.org/files/ENCFF446HGS/@@download/ENCFF446HGS.bam GRCh38 released borderline replicate concordance, inconsistent platforms, mild to moderate bottlenecking missing control alignments ENCFF894UKH bam alignments ENCSR871TKJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens THRAP3-human ENCAB212EPQ DNA False 2016-11-17 ENCODE 2 100 ENCFF251TJX, ENCFF484TAP, ENCFF807MUK 6401331353 ENCODE Processing Pipeline 7a624c6709a7ee1dda6d24869a73333d https://www.encodeproject.org/files/ENCFF894UKH/@@download/ENCFF894UKH.bam hg19 released borderline replicate concordance, inconsistent platforms, mild to moderate bottlenecking missing control alignments ENCFF052AWK bigWig signal p-value ENCSR871TKJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens THRAP3-human ENCAB212EPQ DNA False 2016-11-17 ENCODE 1, 2 ENCFF406TJQ, ENCFF446HGS 2432799787 ENCODE Processing Pipeline 573c965b3440429f182a325d32e790bd https://www.encodeproject.org/files/ENCFF052AWK/@@download/ENCFF052AWK.bigWig GRCh38 released borderline replicate concordance, inconsistent platforms, mild to moderate bottlenecking missing control alignments ENCFF144ACC bigWig signal p-value ENCSR871TKJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens THRAP3-human ENCAB212EPQ DNA False 2016-11-17 ENCODE 2 ENCFF406TJQ 1549601579 ENCODE Processing Pipeline 24d1bdd4a3678bb02e49e40944f9ec30 https://www.encodeproject.org/files/ENCFF144ACC/@@download/ENCFF144ACC.bigWig GRCh38 released borderline replicate concordance, inconsistent platforms, mild to moderate bottlenecking missing control alignments ENCFF060BJL bigWig signal p-value ENCSR871TKJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens THRAP3-human ENCAB212EPQ DNA False 2016-11-17 ENCODE 1 ENCFF446HGS 1897750510 ENCODE Processing Pipeline 2fee5b732f3bdbfb136bee34579412f8 https://www.encodeproject.org/files/ENCFF060BJL/@@download/ENCFF060BJL.bigWig GRCh38 released borderline replicate concordance, inconsistent platforms, mild to moderate bottlenecking missing control alignments ENCFF050PKA bigWig fold change over control ENCSR871TKJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens THRAP3-human ENCAB212EPQ DNA False 2016-11-17 ENCODE 1 ENCFF446HGS 2143124215 ENCODE Processing Pipeline 411081af103bdd0a93d7a37da5586feb https://www.encodeproject.org/files/ENCFF050PKA/@@download/ENCFF050PKA.bigWig GRCh38 released borderline replicate concordance, inconsistent platforms, mild to moderate bottlenecking missing control alignments ENCFF259TSP bigWig fold change over control ENCSR871TKJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens THRAP3-human ENCAB212EPQ DNA False 2016-11-17 ENCODE 2 ENCFF406TJQ 1886507932 ENCODE Processing Pipeline cde9c6f31e06451f7fd56272b359c1bc https://www.encodeproject.org/files/ENCFF259TSP/@@download/ENCFF259TSP.bigWig GRCh38 released borderline replicate concordance, inconsistent platforms, mild to moderate bottlenecking missing control alignments ENCFF690NQB bigWig fold change over control ENCSR871TKJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens THRAP3-human ENCAB212EPQ DNA False 2016-11-17 ENCODE 1, 2 ENCFF406TJQ, ENCFF446HGS 4052436949 ENCODE Processing Pipeline 52ff80da5ccd59050cd779353239b277 https://www.encodeproject.org/files/ENCFF690NQB/@@download/ENCFF690NQB.bigWig GRCh38 released borderline replicate concordance, inconsistent platforms, mild to moderate bottlenecking missing control alignments ENCFF872ZMD bed narrowPeak peaks ENCSR871TKJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens THRAP3-human ENCAB212EPQ DNA False 2016-11-17 ENCODE 1 ENCFF446HGS 7161215 ENCODE Processing Pipeline 0e9e09fc2fe699e1c31bf0dd3a4a2c8e https://www.encodeproject.org/files/ENCFF872ZMD/@@download/ENCFF872ZMD.bed.gz GRCh38 released borderline replicate concordance, inconsistent platforms, mild to moderate bottlenecking missing control alignments ENCFF699TRY bigBed narrowPeak peaks ENCSR871TKJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens THRAP3-human ENCAB212EPQ DNA False 2016-11-17 ENCODE 1, 2 ENCFF407JUL 12809928 ENCODE Processing Pipeline 751f6fdb67da5657d9af131da07602f8 https://www.encodeproject.org/files/ENCFF699TRY/@@download/ENCFF699TRY.bigBed GRCh38 released borderline replicate concordance, inconsistent platforms, mild to moderate bottlenecking missing control alignments ENCFF012TVZ bed narrowPeak peaks ENCSR871TKJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens THRAP3-human ENCAB212EPQ DNA False 2016-11-17 ENCODE 2 ENCFF406TJQ 7200828 ENCODE Processing Pipeline cbecef0e703aa5497d0e507973135a09 https://www.encodeproject.org/files/ENCFF012TVZ/@@download/ENCFF012TVZ.bed.gz GRCh38 released borderline replicate concordance, inconsistent platforms, mild to moderate bottlenecking missing control alignments ENCFF813LHF bigBed narrowPeak peaks ENCSR871TKJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens THRAP3-human ENCAB212EPQ DNA False 2016-11-17 ENCODE 2 ENCFF012TVZ 12895744 ENCODE Processing Pipeline eec829bf5d843477228bd94a6653baa8 https://www.encodeproject.org/files/ENCFF813LHF/@@download/ENCFF813LHF.bigBed GRCh38 released borderline replicate concordance, inconsistent platforms, mild to moderate bottlenecking missing control alignments ENCFF407JUL bed narrowPeak peaks ENCSR871TKJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens THRAP3-human ENCAB212EPQ DNA False 2016-11-17 ENCODE 1, 2 ENCFF406TJQ, ENCFF446HGS 7248526 ENCODE Processing Pipeline 1b0316c1c1940b47ce742b0b79ad169e https://www.encodeproject.org/files/ENCFF407JUL/@@download/ENCFF407JUL.bed.gz GRCh38 released borderline replicate concordance, inconsistent platforms, mild to moderate bottlenecking missing control alignments ENCFF885QWA bigBed narrowPeak peaks ENCSR871TKJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens THRAP3-human ENCAB212EPQ DNA False 2016-11-17 ENCODE 1 ENCFF872ZMD 12970640 ENCODE Processing Pipeline 5ece04d4ae8d8da6396258374ab2f069 https://www.encodeproject.org/files/ENCFF885QWA/@@download/ENCFF885QWA.bigBed GRCh38 released borderline replicate concordance, inconsistent platforms, mild to moderate bottlenecking missing control alignments ENCFF641WUZ bigBed narrowPeak conservative idr thresholded peaks ENCSR871TKJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens THRAP3-human ENCAB212EPQ DNA False 2016-11-17 ENCODE 1, 2 ENCFF302XKF 172997 ENCODE Processing Pipeline 849a4f8f2960340542a90a5a69616aba https://www.encodeproject.org/files/ENCFF641WUZ/@@download/ENCFF641WUZ.bigBed GRCh38 released borderline replicate concordance, inconsistent platforms, mild to moderate bottlenecking missing control alignments ENCFF302XKF bed narrowPeak conservative idr thresholded peaks ENCSR871TKJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens THRAP3-human ENCAB212EPQ DNA False 2016-11-17 ENCODE 1, 2 ENCFF012TVZ, ENCFF407JUL, ENCFF419RSJ, ENCFF872ZMD 50610 ENCODE Processing Pipeline 14be49dfdf070fa86b17f0863c49db08 https://www.encodeproject.org/files/ENCFF302XKF/@@download/ENCFF302XKF.bed.gz GRCh38 released borderline replicate concordance, inconsistent platforms, mild to moderate bottlenecking missing control alignments ENCFF354UUL bed narrowPeak optimal idr thresholded peaks ENCSR871TKJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens THRAP3-human ENCAB212EPQ DNA False 2016-11-17 ENCODE 1, 2 ENCFF012TVZ, ENCFF407JUL, ENCFF419RSJ, ENCFF872ZMD 88032 ENCODE Processing Pipeline a01682d2085868345e98e93637c59466 https://www.encodeproject.org/files/ENCFF354UUL/@@download/ENCFF354UUL.bed.gz GRCh38 released borderline replicate concordance, inconsistent platforms, mild to moderate bottlenecking missing control alignments ENCFF381QUN bigBed narrowPeak optimal idr thresholded peaks ENCSR871TKJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens THRAP3-human ENCAB212EPQ DNA False 2016-11-17 ENCODE 1, 2 ENCFF354UUL 243021 ENCODE Processing Pipeline b667d14616e5c1e0030aa6632d2556d6 https://www.encodeproject.org/files/ENCFF381QUN/@@download/ENCFF381QUN.bigBed GRCh38 released borderline replicate concordance, inconsistent platforms, mild to moderate bottlenecking missing control alignments ENCFF833COZ bigWig signal p-value ENCSR871TKJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens THRAP3-human ENCAB212EPQ DNA False 2016-11-17 ENCODE 1 ENCFF160VXC, ENCFF713FNS, ENCFF834TUP 1730886291 ENCODE Processing Pipeline b3b746734aa2a7e3b876922155151795 https://www.encodeproject.org/files/ENCFF833COZ/@@download/ENCFF833COZ.bigWig hg19 released borderline replicate concordance, inconsistent platforms, mild to moderate bottlenecking missing control alignments ENCFF123SYK bigWig signal p-value ENCSR871TKJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens THRAP3-human ENCAB212EPQ DNA False 2016-11-17 ENCODE 2 ENCFF834TUP, ENCFF894UKH 1533953797 ENCODE Processing Pipeline 32411ae86eca5e65c282097e415d36fe https://www.encodeproject.org/files/ENCFF123SYK/@@download/ENCFF123SYK.bigWig hg19 released borderline replicate concordance, inconsistent platforms, mild to moderate bottlenecking missing control alignments ENCFF749TKH bigWig signal p-value ENCSR871TKJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens THRAP3-human ENCAB212EPQ DNA False 2016-11-17 ENCODE 1, 2 ENCFF160VXC, ENCFF713FNS, ENCFF834TUP, ENCFF894UKH 2429364856 ENCODE Processing Pipeline 54eafc02ca187754f61effcaa6cd5574 https://www.encodeproject.org/files/ENCFF749TKH/@@download/ENCFF749TKH.bigWig hg19 released borderline replicate concordance, inconsistent platforms, mild to moderate bottlenecking missing control alignments ENCFF496YQH bigWig fold change over control ENCSR871TKJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens THRAP3-human ENCAB212EPQ DNA False 2016-11-17 ENCODE 1 ENCFF160VXC, ENCFF713FNS, ENCFF834TUP 2170062342 ENCODE Processing Pipeline e135bda7596295b24b49403450074dc7 https://www.encodeproject.org/files/ENCFF496YQH/@@download/ENCFF496YQH.bigWig hg19 released borderline replicate concordance, inconsistent platforms, mild to moderate bottlenecking missing control alignments ENCFF180WWM bigWig fold change over control ENCSR871TKJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens THRAP3-human ENCAB212EPQ DNA False 2016-11-17 ENCODE 2 ENCFF834TUP, ENCFF894UKH 1865545483 ENCODE Processing Pipeline f9cc87adf698a011ed0f0c16cafdda04 https://www.encodeproject.org/files/ENCFF180WWM/@@download/ENCFF180WWM.bigWig hg19 released borderline replicate concordance, inconsistent platforms, mild to moderate bottlenecking missing control alignments ENCFF341OHT bigWig fold change over control ENCSR871TKJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens THRAP3-human ENCAB212EPQ DNA False 2016-11-17 ENCODE 1, 2 ENCFF160VXC, ENCFF713FNS, ENCFF834TUP, ENCFF894UKH 4045799394 ENCODE Processing Pipeline 69d9b568f4615ffea46752515a28e8f0 https://www.encodeproject.org/files/ENCFF341OHT/@@download/ENCFF341OHT.bigWig hg19 released borderline replicate concordance, inconsistent platforms, mild to moderate bottlenecking missing control alignments ENCFF119HTJ bed narrowPeak peaks ENCSR871TKJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens THRAP3-human ENCAB212EPQ DNA False 2016-11-17 ENCODE 1 ENCFF160VXC, ENCFF713FNS, ENCFF834TUP 7158688 ENCODE Processing Pipeline 75295dfe55f5bd4bfd290e17652e20fa https://www.encodeproject.org/files/ENCFF119HTJ/@@download/ENCFF119HTJ.bed.gz hg19 released borderline replicate concordance, inconsistent platforms, mild to moderate bottlenecking missing control alignments ENCFF100TAA bigBed narrowPeak conservative idr thresholded peaks ENCSR871TKJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens THRAP3-human ENCAB212EPQ DNA False 2016-11-17 ENCODE 1, 2 ENCFF610KUB 171035 ENCODE Processing Pipeline 815e709a6ca00b6a3d3a49cbd87a90ca https://www.encodeproject.org/files/ENCFF100TAA/@@download/ENCFF100TAA.bigBed hg19 released borderline replicate concordance, inconsistent platforms, mild to moderate bottlenecking missing control alignments ENCFF613QHY bed narrowPeak peaks ENCSR871TKJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens THRAP3-human ENCAB212EPQ DNA False 2016-11-17 ENCODE 1, 2 ENCFF160VXC, ENCFF713FNS, ENCFF834TUP, ENCFF894UKH 7243838 ENCODE Processing Pipeline 16ac8d3b1027ce9f4715e9cb34efd8ad https://www.encodeproject.org/files/ENCFF613QHY/@@download/ENCFF613QHY.bed.gz hg19 released borderline replicate concordance, inconsistent platforms, mild to moderate bottlenecking missing control alignments ENCFF627PRV bigBed narrowPeak optimal idr thresholded peaks ENCSR871TKJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens THRAP3-human ENCAB212EPQ DNA False 2016-11-17 ENCODE 1, 2 ENCFF294VWT 252944 ENCODE Processing Pipeline e8d157d3e4f1cdda089a9df3a5f183c9 https://www.encodeproject.org/files/ENCFF627PRV/@@download/ENCFF627PRV.bigBed hg19 released borderline replicate concordance, inconsistent platforms, mild to moderate bottlenecking missing control alignments ENCFF196BYO bed narrowPeak peaks ENCSR871TKJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens THRAP3-human ENCAB212EPQ DNA False 2016-11-17 ENCODE 2 ENCFF834TUP, ENCFF894UKH 7190905 ENCODE Processing Pipeline 384d7721ceedfc6c87bc7fdbba81a592 https://www.encodeproject.org/files/ENCFF196BYO/@@download/ENCFF196BYO.bed.gz hg19 released borderline replicate concordance, inconsistent platforms, mild to moderate bottlenecking missing control alignments ENCFF610KUB bed narrowPeak conservative idr thresholded peaks ENCSR871TKJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens THRAP3-human ENCAB212EPQ DNA False 2016-11-17 ENCODE 1, 2 ENCFF001TDO, ENCFF119HTJ, ENCFF196BYO, ENCFF613QHY 50532 ENCODE Processing Pipeline 4ee902c1263a19cf31eca4ff4a23e403 https://www.encodeproject.org/files/ENCFF610KUB/@@download/ENCFF610KUB.bed.gz hg19 released borderline replicate concordance, inconsistent platforms, mild to moderate bottlenecking missing control alignments ENCFF294VWT bed narrowPeak optimal idr thresholded peaks ENCSR871TKJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens THRAP3-human ENCAB212EPQ DNA False 2016-11-17 ENCODE 1, 2 ENCFF001TDO, ENCFF119HTJ, ENCFF196BYO, ENCFF613QHY 95376 ENCODE Processing Pipeline a6f8dcd67064d010c2255be4e069cee1 https://www.encodeproject.org/files/ENCFF294VWT/@@download/ENCFF294VWT.bed.gz hg19 released borderline replicate concordance, inconsistent platforms, mild to moderate bottlenecking missing control alignments ENCFF334PFL bigBed narrowPeak peaks ENCSR871TKJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens THRAP3-human ENCAB212EPQ DNA False 2016-11-17 ENCODE 1 ENCFF119HTJ 12959061 ENCODE Processing Pipeline 7670797cf2189a0d25b504816e22a5af https://www.encodeproject.org/files/ENCFF334PFL/@@download/ENCFF334PFL.bigBed hg19 released borderline replicate concordance, inconsistent platforms, mild to moderate bottlenecking missing control alignments ENCFF405SHW bigBed narrowPeak peaks ENCSR871TKJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens THRAP3-human ENCAB212EPQ DNA False 2016-11-17 ENCODE 2 ENCFF196BYO 12897773 ENCODE Processing Pipeline 361c59f5fce018e7c33addb3592c59a7 https://www.encodeproject.org/files/ENCFF405SHW/@@download/ENCFF405SHW.bigBed hg19 released borderline replicate concordance, inconsistent platforms, mild to moderate bottlenecking missing control alignments ENCFF797MQN bigBed narrowPeak peaks ENCSR871TKJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens THRAP3-human ENCAB212EPQ DNA False 2016-11-17 ENCODE 1, 2 ENCFF613QHY 12802589 ENCODE Processing Pipeline a0b505df85b73980fc759a7d0ebc711c https://www.encodeproject.org/files/ENCFF797MQN/@@download/ENCFF797MQN.bigBed hg19 released borderline replicate concordance, inconsistent platforms, mild to moderate bottlenecking missing control alignments ENCFF556XCJ fastq reads ENCSR033NQK ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF830-human ENCAB320AXF DNA False 2018-01-26 ENCODE 2 1 100 paired-ended 1 ENCFF886VXN 3647872272 Michael Snyder, Stanford 51e6cd383304059c8cf0355603e33d9b https://www.encodeproject.org/files/ENCFF556XCJ/@@download/ENCFF556XCJ.fastq.gz Illumina HiSeq 4000 /files/ENCFF259GQA/ released mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF415BMN fastq reads ENCSR033NQK ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF830-human ENCAB320AXF DNA False 2018-01-26 ENCODE 1 1 100 paired-ended 1 ENCFF073TIY 3674542744 Michael Snyder, Stanford 588cf4a66b7d7a6f689eb686a3833920 https://www.encodeproject.org/files/ENCFF415BMN/@@download/ENCFF415BMN.fastq.gz Illumina HiSeq 4000 /files/ENCFF498JMO/ released mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF886VXN fastq reads ENCSR033NQK ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF830-human ENCAB320AXF DNA False 2018-01-26 ENCODE 2 1 100 paired-ended 2 ENCFF556XCJ 4058727963 Michael Snyder, Stanford 7bc833c3336aa6390aef59c22557cf67 https://www.encodeproject.org/files/ENCFF886VXN/@@download/ENCFF886VXN.fastq.gz Illumina HiSeq 4000 /files/ENCFF837MIV/ released mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF073TIY fastq reads ENCSR033NQK ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF830-human ENCAB320AXF DNA False 2018-01-26 ENCODE 1 1 100 paired-ended 2 ENCFF415BMN 3770995170 Michael Snyder, Stanford fedbdcdb62d9f1a69f7e6d8007266ded https://www.encodeproject.org/files/ENCFF073TIY/@@download/ENCFF073TIY.fastq.gz Illumina HiSeq 4000 /files/ENCFF502GTS/ released mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF498FBX bam unfiltered alignments ENCSR033NQK ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF830-human ENCAB320AXF DNA False 2018-01-26 ENCODE 1 100 ENCFF073TIY, ENCFF415BMN, ENCFF643CGH 6896779715 ENCODE Processing Pipeline a6730c89abd901f012f9bf861e4e1f41 https://www.encodeproject.org/files/ENCFF498FBX/@@download/ENCFF498FBX.bam GRCh38 released mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF481NOZ bam unfiltered alignments ENCSR033NQK ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF830-human ENCAB320AXF DNA False 2018-01-26 ENCODE 1 100 ENCFF073TIY, ENCFF415BMN, ENCFF807MUK 6892747144 ENCODE Processing Pipeline d83538f80cf41e4bbf2e920384cb3509 https://www.encodeproject.org/files/ENCFF481NOZ/@@download/ENCFF481NOZ.bam hg19 released mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF873PDP bam unfiltered alignments ENCSR033NQK ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF830-human ENCAB320AXF DNA False 2018-01-26 ENCODE 2 100 ENCFF556XCJ, ENCFF643CGH, ENCFF886VXN 7254380957 ENCODE Processing Pipeline 34e3989149d139caf7967fd72b39d96d https://www.encodeproject.org/files/ENCFF873PDP/@@download/ENCFF873PDP.bam GRCh38 released mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF577JDF bam unfiltered alignments ENCSR033NQK ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF830-human ENCAB320AXF DNA False 2018-01-26 ENCODE 2 100 ENCFF556XCJ, ENCFF807MUK, ENCFF886VXN 7247078769 ENCODE Processing Pipeline 4709b12dfd5d14ac89be45e5be301b63 https://www.encodeproject.org/files/ENCFF577JDF/@@download/ENCFF577JDF.bam hg19 released mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF239JHG bam alignments ENCSR033NQK ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF830-human ENCAB320AXF DNA False 2018-01-26 ENCODE 1 100 ENCFF073TIY, ENCFF415BMN, ENCFF643CGH 4042320616 ENCODE Processing Pipeline d8bfd65598de7e8426b4b6b03a111ad2 https://www.encodeproject.org/files/ENCFF239JHG/@@download/ENCFF239JHG.bam GRCh38 released mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF862OJR bam alignments ENCSR033NQK ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF830-human ENCAB320AXF DNA False 2018-01-26 ENCODE 1 100 ENCFF073TIY, ENCFF415BMN, ENCFF807MUK 4040105547 ENCODE Processing Pipeline 2bdebd3be7ad64f65d28ca66156302bc https://www.encodeproject.org/files/ENCFF862OJR/@@download/ENCFF862OJR.bam hg19 released mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF181NHZ bam alignments ENCSR033NQK ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF830-human ENCAB320AXF DNA False 2018-01-26 ENCODE 2 100 ENCFF556XCJ, ENCFF643CGH, ENCFF886VXN 4987748102 ENCODE Processing Pipeline 5c1646f5de8ccaf99ceb64d8c51a7441 https://www.encodeproject.org/files/ENCFF181NHZ/@@download/ENCFF181NHZ.bam GRCh38 released mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF586ITU bam alignments ENCSR033NQK ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF830-human ENCAB320AXF DNA False 2018-01-26 ENCODE 2 100 ENCFF556XCJ, ENCFF807MUK, ENCFF886VXN 4984107527 ENCODE Processing Pipeline fe0f1f5b3ee52a8315dc8c10d2a3eed4 https://www.encodeproject.org/files/ENCFF586ITU/@@download/ENCFF586ITU.bam hg19 released mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF078MOW bigWig signal p-value ENCSR033NQK ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF830-human ENCAB320AXF DNA False 2018-01-26 ENCODE 2 ENCFF586ITU, ENCFF834TUP 1199118236 ENCODE Processing Pipeline 60665e408fe6519dbf28f2d27d90d50b https://www.encodeproject.org/files/ENCFF078MOW/@@download/ENCFF078MOW.bigWig hg19 released mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF997NSC bigWig signal p-value ENCSR033NQK ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF830-human ENCAB320AXF DNA False 2018-01-26 ENCODE 1 ENCFF160VXC, ENCFF862OJR 1255755527 ENCODE Processing Pipeline 464fa3c7fa7b3bd4449ddf3e561239dd https://www.encodeproject.org/files/ENCFF997NSC/@@download/ENCFF997NSC.bigWig hg19 released mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF016RJH bigWig signal p-value ENCSR033NQK ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF830-human ENCAB320AXF DNA False 2018-01-26 ENCODE 1, 2 ENCFF160VXC, ENCFF586ITU, ENCFF834TUP, ENCFF862OJR 2029989144 ENCODE Processing Pipeline 7dd0542d18d25e06aac653aecc39b0de https://www.encodeproject.org/files/ENCFF016RJH/@@download/ENCFF016RJH.bigWig hg19 released mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF839WNB bigWig fold change over control ENCSR033NQK ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF830-human ENCAB320AXF DNA False 2018-01-26 ENCODE 1 ENCFF160VXC, ENCFF862OJR 1289090039 ENCODE Processing Pipeline 6f99f3efada031d40a27f927b40df44d https://www.encodeproject.org/files/ENCFF839WNB/@@download/ENCFF839WNB.bigWig hg19 released mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF171HRV bigWig fold change over control ENCSR033NQK ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF830-human ENCAB320AXF DNA False 2018-01-26 ENCODE 2 ENCFF586ITU, ENCFF834TUP 1498956010 ENCODE Processing Pipeline 83e646dcb6e0d8b9b773c64730e24491 https://www.encodeproject.org/files/ENCFF171HRV/@@download/ENCFF171HRV.bigWig hg19 released mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF817FTR bigWig fold change over control ENCSR033NQK ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF830-human ENCAB320AXF DNA False 2018-01-26 ENCODE 1, 2 ENCFF160VXC, ENCFF586ITU, ENCFF834TUP, ENCFF862OJR 2364185993 ENCODE Processing Pipeline aa2b61c5afa6e53fa7028464f0f49798 https://www.encodeproject.org/files/ENCFF817FTR/@@download/ENCFF817FTR.bigWig hg19 released mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF184LWN bed narrowPeak peaks ENCSR033NQK ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF830-human ENCAB320AXF DNA False 2018-01-26 ENCODE 1 ENCFF160VXC, ENCFF862OJR 6760658 ENCODE Processing Pipeline e5fada76098ed965199101b8c6704614 https://www.encodeproject.org/files/ENCFF184LWN/@@download/ENCFF184LWN.bed.gz hg19 released mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF626FHE bed narrowPeak peaks ENCSR033NQK ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF830-human ENCAB320AXF DNA False 2018-01-26 ENCODE 2 ENCFF586ITU, ENCFF834TUP 7030359 ENCODE Processing Pipeline 89890d22842a3d686828dd8bf8a1d8b9 https://www.encodeproject.org/files/ENCFF626FHE/@@download/ENCFF626FHE.bed.gz hg19 released mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF544LRY bed narrowPeak peaks ENCSR033NQK ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF830-human ENCAB320AXF DNA False 2018-01-26 ENCODE 1, 2 ENCFF160VXC, ENCFF586ITU, ENCFF834TUP, ENCFF862OJR 7204945 ENCODE Processing Pipeline 62a84a58a366a2bbc905adfc2e66dc8e https://www.encodeproject.org/files/ENCFF544LRY/@@download/ENCFF544LRY.bed.gz hg19 released mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF977HSO bigBed narrowPeak peaks ENCSR033NQK ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF830-human ENCAB320AXF DNA False 2018-01-26 ENCODE 1 ENCFF184LWN 12974501 ENCODE Processing Pipeline 228dd9da00cfee9488a0829456cfdec5 https://www.encodeproject.org/files/ENCFF977HSO/@@download/ENCFF977HSO.bigBed hg19 released mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF550SBD bigBed narrowPeak peaks ENCSR033NQK ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF830-human ENCAB320AXF DNA False 2018-01-26 ENCODE 2 ENCFF626FHE 13045218 ENCODE Processing Pipeline 5cedcc10007eacf5653cd56c4926e29d https://www.encodeproject.org/files/ENCFF550SBD/@@download/ENCFF550SBD.bigBed hg19 released mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF542KNZ bigBed narrowPeak peaks ENCSR033NQK ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF830-human ENCAB320AXF DNA False 2018-01-26 ENCODE 1, 2 ENCFF544LRY 12892302 ENCODE Processing Pipeline cc3e3cf2633e64641f078cf4c1a8e37e https://www.encodeproject.org/files/ENCFF542KNZ/@@download/ENCFF542KNZ.bigBed hg19 released mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF826JJT bigBed narrowPeak optimal idr thresholded peaks ENCSR033NQK ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF830-human ENCAB320AXF DNA False 2018-01-26 ENCODE 1, 2 ENCFF996IVU 185899 ENCODE Processing Pipeline 08470c2e20dd25f772f57ea93ba7190b https://www.encodeproject.org/files/ENCFF826JJT/@@download/ENCFF826JJT.bigBed hg19 released mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF081IPO bigBed narrowPeak conservative idr thresholded peaks ENCSR033NQK ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF830-human ENCAB320AXF DNA False 2018-01-26 ENCODE 1, 2 ENCFF413PJP 149375 ENCODE Processing Pipeline 9d529a817c32cd97ffa275a6f805d261 https://www.encodeproject.org/files/ENCFF081IPO/@@download/ENCFF081IPO.bigBed hg19 released mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF413PJP bed narrowPeak conservative idr thresholded peaks ENCSR033NQK ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF830-human ENCAB320AXF DNA False 2018-01-26 ENCODE 1, 2 ENCFF001TDO, ENCFF184LWN, ENCFF544LRY, ENCFF626FHE 45269 ENCODE Processing Pipeline a97e0a44c775507da084b6d269aaa673 https://www.encodeproject.org/files/ENCFF413PJP/@@download/ENCFF413PJP.bed.gz hg19 released mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF996IVU bed narrowPeak optimal idr thresholded peaks ENCSR033NQK ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF830-human ENCAB320AXF DNA False 2018-01-26 ENCODE 1, 2 ENCFF001TDO, ENCFF184LWN, ENCFF544LRY, ENCFF626FHE 67192 ENCODE Processing Pipeline 858a6d4a0594e5207d07a18e71bbcf9e https://www.encodeproject.org/files/ENCFF996IVU/@@download/ENCFF996IVU.bed.gz hg19 released mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF203BYN bigWig signal p-value ENCSR033NQK ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF830-human ENCAB320AXF DNA False 2018-01-26 ENCODE 1 ENCFF239JHG 1129003259 ENCODE Processing Pipeline 4fdb016d26cb4ba4de47fd0446c306de https://www.encodeproject.org/files/ENCFF203BYN/@@download/ENCFF203BYN.bigWig GRCh38 released mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF347CNK bigWig signal p-value ENCSR033NQK ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF830-human ENCAB320AXF DNA False 2018-01-26 ENCODE 2 ENCFF181NHZ 1124717574 ENCODE Processing Pipeline a5417cac74e6077c6c2c6f07cbb80bc6 https://www.encodeproject.org/files/ENCFF347CNK/@@download/ENCFF347CNK.bigWig GRCh38 released mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF179DZT bigWig signal p-value ENCSR033NQK ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF830-human ENCAB320AXF DNA False 2018-01-26 ENCODE 1, 2 ENCFF181NHZ, ENCFF239JHG 2025264256 ENCODE Processing Pipeline e5badb31a6d3d7618307d194431f6b3d https://www.encodeproject.org/files/ENCFF179DZT/@@download/ENCFF179DZT.bigWig GRCh38 released mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF745VNX bigWig fold change over control ENCSR033NQK ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF830-human ENCAB320AXF DNA False 2018-01-26 ENCODE 1 ENCFF239JHG 1295027459 ENCODE Processing Pipeline 751e14d0aae96e9a4b6cfba30949e329 https://www.encodeproject.org/files/ENCFF745VNX/@@download/ENCFF745VNX.bigWig GRCh38 released mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF879RWA bigWig fold change over control ENCSR033NQK ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF830-human ENCAB320AXF DNA False 2018-01-26 ENCODE 2 ENCFF181NHZ 1500152314 ENCODE Processing Pipeline 95a8967b2d43257f07313c6e098287e7 https://www.encodeproject.org/files/ENCFF879RWA/@@download/ENCFF879RWA.bigWig GRCh38 released mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF869IEP bigWig fold change over control ENCSR033NQK ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF830-human ENCAB320AXF DNA False 2018-01-26 ENCODE 1, 2 ENCFF181NHZ, ENCFF239JHG 2345597515 ENCODE Processing Pipeline 53e1b169ce9280e591f47fea5b552e23 https://www.encodeproject.org/files/ENCFF869IEP/@@download/ENCFF869IEP.bigWig GRCh38 released mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF047AWC bed narrowPeak peaks ENCSR033NQK ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF830-human ENCAB320AXF DNA False 2018-01-26 ENCODE 1, 2 ENCFF181NHZ, ENCFF239JHG 7205999 ENCODE Processing Pipeline 10b08a5eb440fa7130d22c190e8d1035 https://www.encodeproject.org/files/ENCFF047AWC/@@download/ENCFF047AWC.bed.gz GRCh38 released mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF626YPP bed narrowPeak peaks ENCSR033NQK ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF830-human ENCAB320AXF DNA False 2018-01-26 ENCODE 2 ENCFF181NHZ 6958768 ENCODE Processing Pipeline 9be8e82b6f33d1d6195baa879c2dfc57 https://www.encodeproject.org/files/ENCFF626YPP/@@download/ENCFF626YPP.bed.gz GRCh38 released mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF825HYT bigBed narrowPeak peaks ENCSR033NQK ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF830-human ENCAB320AXF DNA False 2018-01-26 ENCODE 1 ENCFF563YVH 12987086 ENCODE Processing Pipeline 685f6dbd0a520c48fe254ee0abe5b15b https://www.encodeproject.org/files/ENCFF825HYT/@@download/ENCFF825HYT.bigBed GRCh38 released mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF998XIA bigBed narrowPeak peaks ENCSR033NQK ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF830-human ENCAB320AXF DNA False 2018-01-26 ENCODE 2 ENCFF626YPP 13055860 ENCODE Processing Pipeline 401a9d29d8bc521a25fd5e7230caab03 https://www.encodeproject.org/files/ENCFF998XIA/@@download/ENCFF998XIA.bigBed GRCh38 released mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF306BSE bigBed narrowPeak peaks ENCSR033NQK ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF830-human ENCAB320AXF DNA False 2018-01-26 ENCODE 1, 2 ENCFF047AWC 12907815 ENCODE Processing Pipeline 5da55f5a85136d646a3647c393bf8a69 https://www.encodeproject.org/files/ENCFF306BSE/@@download/ENCFF306BSE.bigBed GRCh38 released mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF696WVL bed narrowPeak conservative idr thresholded peaks ENCSR033NQK ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF830-human ENCAB320AXF DNA False 2018-01-26 ENCODE 1, 2 ENCFF047AWC, ENCFF419RSJ, ENCFF563YVH, ENCFF626YPP 44157 ENCODE Processing Pipeline 8a52fcebe19511ac1f3e8683827957af https://www.encodeproject.org/files/ENCFF696WVL/@@download/ENCFF696WVL.bed.gz GRCh38 released mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF563YVH bed narrowPeak peaks ENCSR033NQK ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF830-human ENCAB320AXF DNA False 2018-01-26 ENCODE 1 ENCFF239JHG 6654230 ENCODE Processing Pipeline a10af8c23fa482e00c146988cfe4f385 https://www.encodeproject.org/files/ENCFF563YVH/@@download/ENCFF563YVH.bed.gz GRCh38 released mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF594CRK bigBed narrowPeak conservative idr thresholded peaks ENCSR033NQK ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF830-human ENCAB320AXF DNA False 2018-01-26 ENCODE 1, 2 ENCFF696WVL 148818 ENCODE Processing Pipeline 029e39435b812239c4be23dae6baa6cd https://www.encodeproject.org/files/ENCFF594CRK/@@download/ENCFF594CRK.bigBed GRCh38 released mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF979NKM bed narrowPeak optimal idr thresholded peaks ENCSR033NQK ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF830-human ENCAB320AXF DNA False 2018-01-26 ENCODE 1, 2 ENCFF047AWC, ENCFF419RSJ, ENCFF563YVH, ENCFF626YPP 66586 ENCODE Processing Pipeline a4cc5a08895ade9dede6859e3aaae5dc https://www.encodeproject.org/files/ENCFF979NKM/@@download/ENCFF979NKM.bed.gz GRCh38 released mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF316XJJ bigBed narrowPeak optimal idr thresholded peaks ENCSR033NQK ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF830-human ENCAB320AXF DNA False 2018-01-26 ENCODE 1, 2 ENCFF979NKM 186366 ENCODE Processing Pipeline dbd90d0c5a2bc0035ddef62684a6b204 https://www.encodeproject.org/files/ENCFF316XJJ/@@download/ENCFF316XJJ.bigBed GRCh38 released mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF653BVZ bam unfiltered alignments ENCSR876GXA ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB33-human ENCAB292USO DNA False 2016-06-23 ENCODE 3 100 ENCFF189UUN, ENCFF332XKO, ENCFF807MUK 4553701541 ENCODE Processing Pipeline 2c52995557b0e060c93be678e28ca354 https://www.encodeproject.org/files/ENCFF653BVZ/@@download/ENCFF653BVZ.bam hg19 released low read depth ENCFF237QMV bam unfiltered alignments ENCSR876GXA ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB33-human ENCAB292USO DNA False 2016-06-23 ENCODE 4 100 ENCFF094FKH, ENCFF807MUK, ENCFF968SHS 3743465486 ENCODE Processing Pipeline 215c466fd6df04a03c6590e51634502f https://www.encodeproject.org/files/ENCFF237QMV/@@download/ENCFF237QMV.bam hg19 released low read depth ENCFF094FKH fastq reads ENCSR876GXA ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB33-human ENCAB292USO DNA False 2016-06-23 ENCODE 4 1 100 paired-ended 1 ENCFF968SHS 1655034233 Michael Snyder, Stanford 04e98aead0ab1f887f6bff89caeec55f SRA:SRR5112202 https://www.encodeproject.org/files/ENCFF094FKH/@@download/ENCFF094FKH.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFD/ released low read depth ENCFF968SHS fastq reads ENCSR876GXA ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB33-human ENCAB292USO DNA False 2016-06-23 ENCODE 4 1 100 paired-ended 2 ENCFF094FKH 1720416778 Michael Snyder, Stanford 09b51cf6b4a004b2d915454ebbf2e4b7 SRA:SRR5112202 https://www.encodeproject.org/files/ENCFF968SHS/@@download/ENCFF968SHS.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFA/ released low read depth ENCFF332XKO fastq reads ENCSR876GXA ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB33-human ENCAB292USO DNA False 2016-06-23 ENCODE 3 1 100 paired-ended 1 ENCFF189UUN 2126850994 Michael Snyder, Stanford eb996cff637b109c765b916db17977b3 SRA:SRR5112201 https://www.encodeproject.org/files/ENCFF332XKO/@@download/ENCFF332XKO.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFF/ released low read depth ENCFF189UUN fastq reads ENCSR876GXA ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB33-human ENCAB292USO DNA False 2016-06-23 ENCODE 3 1 100 paired-ended 2 ENCFF332XKO 2058799488 Michael Snyder, Stanford a5f61bbcd15afcffdbd477a7ed9313fd SRA:SRR5112201 https://www.encodeproject.org/files/ENCFF189UUN/@@download/ENCFF189UUN.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFH/ released low read depth ENCFF397XVJ bam alignments ENCSR876GXA ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB33-human ENCAB292USO DNA False 2016-06-23 ENCODE 3 100 ENCFF189UUN, ENCFF332XKO, ENCFF807MUK 3741355948 ENCODE Processing Pipeline dbc3dfb7c06fbadc3cd193ca4dde3cf8 https://www.encodeproject.org/files/ENCFF397XVJ/@@download/ENCFF397XVJ.bam hg19 released low read depth ENCFF675GYP bam alignments ENCSR876GXA ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB33-human ENCAB292USO DNA False 2016-06-23 ENCODE 4 100 ENCFF094FKH, ENCFF807MUK, ENCFF968SHS 3096534358 ENCODE Processing Pipeline dc8cc650e3fb1c9e853c2d8dad3cb2ed https://www.encodeproject.org/files/ENCFF675GYP/@@download/ENCFF675GYP.bam hg19 released low read depth ENCFF863HQX bigWig signal p-value ENCSR876GXA ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB33-human ENCAB292USO DNA False 2016-06-23 ENCODE 3 ENCFF397XVJ, ENCFF581ZJL 949417509 ENCODE Processing Pipeline 598addffd1162fd62abd16640bc5668e https://www.encodeproject.org/files/ENCFF863HQX/@@download/ENCFF863HQX.bigWig hg19 released low read depth ENCFF895YED bigWig signal p-value ENCSR876GXA ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB33-human ENCAB292USO DNA False 2016-06-23 ENCODE 4 ENCFF051LWI, ENCFF675GYP 931792802 ENCODE Processing Pipeline 013e64c894afcdf73eb671a39c837044 https://www.encodeproject.org/files/ENCFF895YED/@@download/ENCFF895YED.bigWig hg19 released low read depth ENCFF604RBK bigWig signal p-value ENCSR876GXA ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB33-human ENCAB292USO DNA False 2016-06-23 ENCODE 3, 4 ENCFF051LWI, ENCFF397XVJ, ENCFF581ZJL, ENCFF675GYP 1854512096 ENCODE Processing Pipeline 4a445421a57963bb50492fbcc0d5b537 https://www.encodeproject.org/files/ENCFF604RBK/@@download/ENCFF604RBK.bigWig hg19 released low read depth ENCFF833GNS bigWig fold change over control ENCSR876GXA ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB33-human ENCAB292USO DNA False 2016-06-23 ENCODE 4 ENCFF051LWI, ENCFF675GYP 961347684 ENCODE Processing Pipeline 1ac2cf4df6e51d4f1257b452957168a6 https://www.encodeproject.org/files/ENCFF833GNS/@@download/ENCFF833GNS.bigWig hg19 released low read depth ENCFF141KVC bigWig fold change over control ENCSR876GXA ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB33-human ENCAB292USO DNA False 2016-06-23 ENCODE 3 ENCFF397XVJ, ENCFF581ZJL 1083427464 ENCODE Processing Pipeline c75e5cb1a772ba80ca4759e657266453 https://www.encodeproject.org/files/ENCFF141KVC/@@download/ENCFF141KVC.bigWig hg19 released low read depth ENCFF563KAU bigWig fold change over control ENCSR876GXA ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB33-human ENCAB292USO DNA False 2016-06-23 ENCODE 3, 4 ENCFF051LWI, ENCFF397XVJ, ENCFF581ZJL, ENCFF675GYP 1915270228 ENCODE Processing Pipeline 19f03d0197ebed789fe9c5a38918fd75 https://www.encodeproject.org/files/ENCFF563KAU/@@download/ENCFF563KAU.bigWig hg19 released low read depth ENCFF778NFD bed narrowPeak peaks ENCSR876GXA ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB33-human ENCAB292USO DNA False 2016-06-23 ENCODE 4 ENCFF051LWI, ENCFF675GYP 7067095 ENCODE Processing Pipeline 3555732e90f0ff054715edfa7fa639e3 https://www.encodeproject.org/files/ENCFF778NFD/@@download/ENCFF778NFD.bed.gz hg19 released low read depth ENCFF984OJS bigBed narrowPeak peaks ENCSR876GXA ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB33-human ENCAB292USO DNA False 2016-06-23 ENCODE 3 ENCFF388RWJ 12873354 ENCODE Processing Pipeline 6fa4fe92ef362aec83b9705180301d85 https://www.encodeproject.org/files/ENCFF984OJS/@@download/ENCFF984OJS.bigBed hg19 released low read depth ENCFF388RWJ bed narrowPeak peaks ENCSR876GXA ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB33-human ENCAB292USO DNA False 2016-06-23 ENCODE 3 ENCFF397XVJ, ENCFF581ZJL 7022368 ENCODE Processing Pipeline c5f090b4652004481eb89024056e4c29 https://www.encodeproject.org/files/ENCFF388RWJ/@@download/ENCFF388RWJ.bed.gz hg19 released low read depth ENCFF108BVL bed narrowPeak peaks ENCSR876GXA ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB33-human ENCAB292USO DNA False 2016-06-23 ENCODE 3, 4 ENCFF051LWI, ENCFF397XVJ, ENCFF581ZJL, ENCFF675GYP 7278648 ENCODE Processing Pipeline 2e985497367799e3ea0d43b1ad7cb110 https://www.encodeproject.org/files/ENCFF108BVL/@@download/ENCFF108BVL.bed.gz hg19 released low read depth ENCFF987MLB bigBed narrowPeak peaks ENCSR876GXA ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB33-human ENCAB292USO DNA False 2016-06-23 ENCODE 4 ENCFF778NFD 12856947 ENCODE Processing Pipeline 69a0d19751a1fcf4d76398081697ca53 https://www.encodeproject.org/files/ENCFF987MLB/@@download/ENCFF987MLB.bigBed hg19 released low read depth ENCFF853CEX bigBed narrowPeak peaks ENCSR876GXA ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB33-human ENCAB292USO DNA False 2016-06-23 ENCODE 3, 4 ENCFF108BVL 12947594 ENCODE Processing Pipeline 81e2d91f6f0487076b037d3770067fc2 https://www.encodeproject.org/files/ENCFF853CEX/@@download/ENCFF853CEX.bigBed hg19 released low read depth ENCFF073OVL bam unfiltered alignments ENCSR876GXA ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB33-human ENCAB292USO DNA False 2016-06-23 ENCODE 4 100 ENCFF094FKH, ENCFF643CGH, ENCFF968SHS 3746071100 ENCODE Processing Pipeline 02250fc5261a1b9889fdc96f2252bf35 https://www.encodeproject.org/files/ENCFF073OVL/@@download/ENCFF073OVL.bam GRCh38 released low read depth ENCFF775SSR bam unfiltered alignments ENCSR876GXA ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB33-human ENCAB292USO DNA False 2016-06-23 ENCODE 3 100 ENCFF189UUN, ENCFF332XKO, ENCFF643CGH 4557087515 ENCODE Processing Pipeline 4c13efcbfead6c65e8b52f6e0d956c46 https://www.encodeproject.org/files/ENCFF775SSR/@@download/ENCFF775SSR.bam GRCh38 released low read depth ENCFF632WSK bam alignments ENCSR876GXA ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB33-human ENCAB292USO DNA False 2016-06-23 ENCODE 4 100 ENCFF094FKH, ENCFF643CGH, ENCFF968SHS 3097794878 ENCODE Processing Pipeline bb404bccfca41bcdfe1c3f46b4003893 https://www.encodeproject.org/files/ENCFF632WSK/@@download/ENCFF632WSK.bam GRCh38 released low read depth ENCFF226IAA bam alignments ENCSR876GXA ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB33-human ENCAB292USO DNA False 2016-06-23 ENCODE 3 100 ENCFF189UUN, ENCFF332XKO, ENCFF643CGH 3742608948 ENCODE Processing Pipeline b3ad9602bb8926b585b0fd984376295a https://www.encodeproject.org/files/ENCFF226IAA/@@download/ENCFF226IAA.bam GRCh38 released low read depth ENCFF430GWT bigWig signal p-value ENCSR876GXA ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB33-human ENCAB292USO DNA False 2016-06-23 ENCODE 3 ENCFF226IAA, ENCFF910IKB 1020509694 ENCODE Processing Pipeline 2a6c9ea7b2410afcb90fcd31fee9073c https://www.encodeproject.org/files/ENCFF430GWT/@@download/ENCFF430GWT.bigWig GRCh38 released low read depth ENCFF150EDF bigWig signal p-value ENCSR876GXA ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB33-human ENCAB292USO DNA False 2016-06-23 ENCODE 4 ENCFF227IZS, ENCFF632WSK 893642692 ENCODE Processing Pipeline f656c40fcedec9a8cf24708de2d7a1b1 https://www.encodeproject.org/files/ENCFF150EDF/@@download/ENCFF150EDF.bigWig GRCh38 released low read depth ENCFF963MJM bigWig signal p-value ENCSR876GXA ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB33-human ENCAB292USO DNA False 2016-06-23 ENCODE 3, 4 ENCFF226IAA, ENCFF227IZS, ENCFF632WSK, ENCFF910IKB 1830393401 ENCODE Processing Pipeline 8eed0150bc936a6ebbe29e0a9eddb7a9 https://www.encodeproject.org/files/ENCFF963MJM/@@download/ENCFF963MJM.bigWig GRCh38 released low read depth ENCFF338SJT bigWig fold change over control ENCSR876GXA ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB33-human ENCAB292USO DNA False 2016-06-23 ENCODE 3 ENCFF226IAA, ENCFF910IKB 1085540990 ENCODE Processing Pipeline f5f0b5c7b852687281d265df72c76420 https://www.encodeproject.org/files/ENCFF338SJT/@@download/ENCFF338SJT.bigWig GRCh38 released low read depth ENCFF029WWS bigWig fold change over control ENCSR876GXA ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB33-human ENCAB292USO DNA False 2016-06-23 ENCODE 4 ENCFF227IZS, ENCFF632WSK 961758595 ENCODE Processing Pipeline 514c9cda4cdd909666c41bdf7f494ce5 https://www.encodeproject.org/files/ENCFF029WWS/@@download/ENCFF029WWS.bigWig GRCh38 released low read depth ENCFF033QAN bigWig fold change over control ENCSR876GXA ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB33-human ENCAB292USO DNA False 2016-06-23 ENCODE 3, 4 ENCFF226IAA, ENCFF227IZS, ENCFF632WSK, ENCFF910IKB 1929506283 ENCODE Processing Pipeline 077d531c47d67666eda5abfdf69091e8 https://www.encodeproject.org/files/ENCFF033QAN/@@download/ENCFF033QAN.bigWig GRCh38 released low read depth ENCFF139UBB bed narrowPeak peaks ENCSR876GXA ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB33-human ENCAB292USO DNA False 2016-06-23 ENCODE 3 ENCFF226IAA, ENCFF910IKB 7005465 ENCODE Processing Pipeline 9afe7615d59c4041bc392986e28402d5 https://www.encodeproject.org/files/ENCFF139UBB/@@download/ENCFF139UBB.bed.gz GRCh38 released low read depth ENCFF930SRJ bed narrowPeak peaks ENCSR876GXA ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB33-human ENCAB292USO DNA False 2016-06-23 ENCODE 4 ENCFF227IZS, ENCFF632WSK 7022101 ENCODE Processing Pipeline 27898cff43da2d6384e20a271b264424 https://www.encodeproject.org/files/ENCFF930SRJ/@@download/ENCFF930SRJ.bed.gz GRCh38 released low read depth ENCFF673YDA bed narrowPeak peaks ENCSR876GXA ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB33-human ENCAB292USO DNA False 2016-06-23 ENCODE 3, 4 ENCFF226IAA, ENCFF227IZS, ENCFF632WSK, ENCFF910IKB 7144801 ENCODE Processing Pipeline 0c2ac8d2fc662b8eba2083101a045794 https://www.encodeproject.org/files/ENCFF673YDA/@@download/ENCFF673YDA.bed.gz GRCh38 released low read depth ENCFF696KXL bigBed narrowPeak peaks ENCSR876GXA ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB33-human ENCAB292USO DNA False 2016-06-23 ENCODE 3 ENCFF139UBB 12912151 ENCODE Processing Pipeline a96c8fe1f66ff2ad4ed85166399f22e0 https://www.encodeproject.org/files/ENCFF696KXL/@@download/ENCFF696KXL.bigBed GRCh38 released low read depth ENCFF283CSH bigBed narrowPeak peaks ENCSR876GXA ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB33-human ENCAB292USO DNA False 2016-06-23 ENCODE 4 ENCFF930SRJ 12861561 ENCODE Processing Pipeline 6a8e29d744575a4014fb4f85df78f65f https://www.encodeproject.org/files/ENCFF283CSH/@@download/ENCFF283CSH.bigBed GRCh38 released low read depth ENCFF573SPH bigBed narrowPeak peaks ENCSR876GXA ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB33-human ENCAB292USO DNA False 2016-06-23 ENCODE 3, 4 ENCFF673YDA 12802331 ENCODE Processing Pipeline 1b3f3db71cdca9a49ba0fa681cd86b56 https://www.encodeproject.org/files/ENCFF573SPH/@@download/ENCFF573SPH.bigBed GRCh38 released low read depth ENCFF909FRB bed narrowPeak conservative idr thresholded peaks ENCSR876GXA ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB33-human ENCAB292USO DNA False 2016-06-23 ENCODE 3, 4 ENCFF139UBB, ENCFF419RSJ, ENCFF673YDA, ENCFF930SRJ 874272 ENCODE Processing Pipeline f0ab1dadc53548c21013b56ae11d10e0 https://www.encodeproject.org/files/ENCFF909FRB/@@download/ENCFF909FRB.bed.gz GRCh38 released low read depth ENCFF511PMB bigBed narrowPeak conservative idr thresholded peaks ENCSR876GXA ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB33-human ENCAB292USO DNA False 2016-06-23 ENCODE 3, 4 ENCFF909FRB 1524746 ENCODE Processing Pipeline 79ea2855a66764abefbd69be35adb217 https://www.encodeproject.org/files/ENCFF511PMB/@@download/ENCFF511PMB.bigBed GRCh38 released low read depth ENCFF556STK bed narrowPeak optimal idr thresholded peaks ENCSR876GXA ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB33-human ENCAB292USO DNA False 2016-06-23 ENCODE 3, 4 ENCFF139UBB, ENCFF419RSJ, ENCFF673YDA, ENCFF930SRJ 1123859 ENCODE Processing Pipeline fbe90617a2d058c5b6c374a662588443 https://www.encodeproject.org/files/ENCFF556STK/@@download/ENCFF556STK.bed.gz GRCh38 released low read depth ENCFF474LWU bigBed narrowPeak optimal idr thresholded peaks ENCSR876GXA ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB33-human ENCAB292USO DNA False 2016-06-23 ENCODE 3, 4 ENCFF556STK 2363956 ENCODE Processing Pipeline 92d154bb452ca86149bd9ddec3a23bc8 https://www.encodeproject.org/files/ENCFF474LWU/@@download/ENCFF474LWU.bigBed GRCh38 released low read depth ENCFF885VCM bigBed narrowPeak conservative idr thresholded peaks ENCSR876GXA ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB33-human ENCAB292USO DNA False 2016-06-23 ENCODE 3, 4 ENCFF681IOP 1377770 ENCODE Processing Pipeline 5532e345bace13f1ec93347901bd0d26 https://www.encodeproject.org/files/ENCFF885VCM/@@download/ENCFF885VCM.bigBed hg19 released low read depth ENCFF151JTF bigBed narrowPeak optimal idr thresholded peaks ENCSR876GXA ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB33-human ENCAB292USO DNA False 2016-06-23 ENCODE 3, 4 ENCFF408FQC 1653518 ENCODE Processing Pipeline 087aa3a58166ed6bc094caa8ad370fe5 https://www.encodeproject.org/files/ENCFF151JTF/@@download/ENCFF151JTF.bigBed hg19 released low read depth ENCFF681IOP bed narrowPeak conservative idr thresholded peaks ENCSR876GXA ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB33-human ENCAB292USO DNA False 2016-06-23 ENCODE 3, 4 ENCFF001TDO, ENCFF108BVL, ENCFF388RWJ, ENCFF778NFD 759324 ENCODE Processing Pipeline faa326900a794100ddc74dd9fb3cc602 https://www.encodeproject.org/files/ENCFF681IOP/@@download/ENCFF681IOP.bed.gz hg19 released low read depth ENCFF408FQC bed narrowPeak optimal idr thresholded peaks ENCSR876GXA ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB33-human ENCAB292USO DNA False 2016-06-23 ENCODE 3, 4 ENCFF001TDO, ENCFF108BVL, ENCFF388RWJ, ENCFF778NFD 974557 ENCODE Processing Pipeline a9f515a615c9736874c5b02b3ef2f106 https://www.encodeproject.org/files/ENCFF408FQC/@@download/ENCFF408FQC.bed.gz hg19 released low read depth ENCFF273PKH bam unfiltered alignments ENCSR474CVP ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM28-human ENCAB257ANZ DNA False 2017-11-14 ENCODE 1 100 ENCFF439KQS, ENCFF784WEP, ENCFF807MUK 4843981004 ENCODE Processing Pipeline 2f5248e023eeafe26c611a6e3f6cf04e https://www.encodeproject.org/files/ENCFF273PKH/@@download/ENCFF273PKH.bam hg19 released experiment not submitted to GEO ENCFF784WEP fastq reads ENCSR474CVP ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM28-human ENCAB257ANZ DNA False 2017-11-14 ENCODE 1 1 100 paired-ended 1 ENCFF439KQS 2203656419 Michael Snyder, Stanford 615c242f3762dd0e183965c0e3bf44d7 https://www.encodeproject.org/files/ENCFF784WEP/@@download/ENCFF784WEP.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFF/ released experiment not submitted to GEO ENCFF439KQS fastq reads ENCSR474CVP ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM28-human ENCAB257ANZ DNA False 2017-11-14 ENCODE 1 1 100 paired-ended 2 ENCFF784WEP 2237023827 Michael Snyder, Stanford ceb379803d332716433b8ea75c2a9b3b https://www.encodeproject.org/files/ENCFF439KQS/@@download/ENCFF439KQS.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFH/ released experiment not submitted to GEO ENCFF064TLT bam alignments ENCSR474CVP ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM28-human ENCAB257ANZ DNA False 2017-11-14 ENCODE 1 ENCFF439KQS, ENCFF784WEP, ENCFF807MUK 3943890673 ENCODE Processing Pipeline 474693cd55ceaf193b8aec379ecbdea7 https://www.encodeproject.org/files/ENCFF064TLT/@@download/ENCFF064TLT.bam hg19 released experiment not submitted to GEO ENCFF914HTT fastq reads ENCSR474CVP ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM28-human ENCAB257ANZ DNA False 2017-11-14 ENCODE 3 1 101 paired-ended 1 ENCFF531XCH 2260473002 Michael Snyder, Stanford fb826f484c547b638f92523168c436ac https://www.encodeproject.org/files/ENCFF914HTT/@@download/ENCFF914HTT.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFD/ released experiment not submitted to GEO ENCFF531XCH fastq reads ENCSR474CVP ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM28-human ENCAB257ANZ DNA False 2017-11-14 ENCODE 3 1 101 paired-ended 2 ENCFF914HTT 2302134873 Michael Snyder, Stanford a5de280809c59b1e3014b71d384bdcd0 https://www.encodeproject.org/files/ENCFF531XCH/@@download/ENCFF531XCH.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFA/ released experiment not submitted to GEO ENCFF506BXT bam unfiltered alignments ENCSR474CVP ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM28-human ENCAB257ANZ DNA False 2017-11-14 ENCODE 3 101 ENCFF531XCH, ENCFF807MUK, ENCFF914HTT 4505689962 ENCODE Processing Pipeline 8964f7b8691e5f1a53624dfdef90ace8 https://www.encodeproject.org/files/ENCFF506BXT/@@download/ENCFF506BXT.bam hg19 released experiment not submitted to GEO ENCFF367DJA bam alignments ENCSR474CVP ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM28-human ENCAB257ANZ DNA False 2017-11-14 ENCODE 3 101 ENCFF531XCH, ENCFF807MUK, ENCFF914HTT 3884694510 ENCODE Processing Pipeline 2cddba8621c625889ede22954c35c2d6 https://www.encodeproject.org/files/ENCFF367DJA/@@download/ENCFF367DJA.bam hg19 released experiment not submitted to GEO ENCFF552OWQ bam unfiltered alignments ENCSR474CVP ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM28-human ENCAB257ANZ DNA False 2017-11-14 ENCODE 1 100 ENCFF439KQS, ENCFF643CGH, ENCFF784WEP 4847841765 ENCODE Processing Pipeline af0c9a17245c8b2a3e4f06054a65ba56 https://www.encodeproject.org/files/ENCFF552OWQ/@@download/ENCFF552OWQ.bam GRCh38 released experiment not submitted to GEO ENCFF882BOA bam alignments ENCSR474CVP ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM28-human ENCAB257ANZ DNA False 2017-11-14 ENCODE 1 100 ENCFF439KQS, ENCFF643CGH, ENCFF784WEP 3947151664 ENCODE Processing Pipeline cd3e398d03d432bdb17add40c0c83db0 https://www.encodeproject.org/files/ENCFF882BOA/@@download/ENCFF882BOA.bam GRCh38 released experiment not submitted to GEO ENCFF597KOW bam unfiltered alignments ENCSR474CVP ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM28-human ENCAB257ANZ DNA False 2017-11-14 ENCODE 3 101 ENCFF531XCH, ENCFF643CGH, ENCFF914HTT 4510186371 ENCODE Processing Pipeline d8759d9dcb00de28009921b7670343ab https://www.encodeproject.org/files/ENCFF597KOW/@@download/ENCFF597KOW.bam GRCh38 released experiment not submitted to GEO ENCFF393YFX bam alignments ENCSR474CVP ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM28-human ENCAB257ANZ DNA False 2017-11-14 ENCODE 3 101 ENCFF531XCH, ENCFF643CGH, ENCFF914HTT 3886043108 ENCODE Processing Pipeline 51eecf90503b88dc3630b46a748aaff4 https://www.encodeproject.org/files/ENCFF393YFX/@@download/ENCFF393YFX.bam GRCh38 released experiment not submitted to GEO ENCFF501VUR bigWig fold change over control ENCSR474CVP ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM28-human ENCAB257ANZ DNA False 2017-11-14 ENCODE 1 ENCFF064TLT, ENCFF581ZJL 1107807261 ENCODE Processing Pipeline 7c577a3299cd4a5b663d15db32b4c0b9 https://www.encodeproject.org/files/ENCFF501VUR/@@download/ENCFF501VUR.bigWig hg19 released experiment not submitted to GEO ENCFF893NOB bigWig signal p-value ENCSR474CVP ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM28-human ENCAB257ANZ DNA False 2017-11-14 ENCODE 1, 3 ENCFF051LWI, ENCFF064TLT, ENCFF367DJA, ENCFF581ZJL 1599704183 ENCODE Processing Pipeline 1d579a7068ca58b380838d5b1404894a https://www.encodeproject.org/files/ENCFF893NOB/@@download/ENCFF893NOB.bigWig hg19 released experiment not submitted to GEO ENCFF677ZYP bigBed narrowPeak optimal idr thresholded peaks ENCSR474CVP ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM28-human ENCAB257ANZ DNA False 2017-11-14 ENCODE 1, 3 ENCFF164HLQ 743941 ENCODE Processing Pipeline a0ff2a47f818f4e6d33e00cd41404c83 https://www.encodeproject.org/files/ENCFF677ZYP/@@download/ENCFF677ZYP.bigBed hg19 released experiment not submitted to GEO ENCFF718TWK bigWig signal p-value ENCSR474CVP ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM28-human ENCAB257ANZ DNA False 2017-11-14 ENCODE 1 ENCFF882BOA, ENCFF910IKB 1103025665 ENCODE Processing Pipeline d3e8366e29a56c667edf9cd0b3813709 https://www.encodeproject.org/files/ENCFF718TWK/@@download/ENCFF718TWK.bigWig GRCh38 released experiment not submitted to GEO ENCFF267XHE bigWig fold change over control ENCSR474CVP ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM28-human ENCAB257ANZ DNA False 2017-11-14 ENCODE 1 ENCFF882BOA, ENCFF910IKB 1112695888 ENCODE Processing Pipeline d59538ea23cdaf51ddd7575cd21790b9 https://www.encodeproject.org/files/ENCFF267XHE/@@download/ENCFF267XHE.bigWig GRCh38 released experiment not submitted to GEO ENCFF886DEE bigWig signal p-value ENCSR474CVP ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM28-human ENCAB257ANZ DNA False 2017-11-14 ENCODE 3 ENCFF051LWI, ENCFF367DJA 950633790 ENCODE Processing Pipeline 45910a4c07e69516425ef9d11d3cd4ee https://www.encodeproject.org/files/ENCFF886DEE/@@download/ENCFF886DEE.bigWig hg19 released experiment not submitted to GEO ENCFF747PPN bigBed narrowPeak peaks ENCSR474CVP ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM28-human ENCAB257ANZ DNA False 2017-11-14 ENCODE 1 ENCFF481CBF 13094135 ENCODE Processing Pipeline e30a86f78b261f3ec37c71ec27247adb https://www.encodeproject.org/files/ENCFF747PPN/@@download/ENCFF747PPN.bigBed hg19 released experiment not submitted to GEO ENCFF911LSH bigBed narrowPeak conservative idr thresholded peaks ENCSR474CVP ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM28-human ENCAB257ANZ DNA False 2017-11-14 ENCODE 1, 3 ENCFF906BNB 411029 ENCODE Processing Pipeline b2aa0ea41918e0473847e1139bc9d3c6 https://www.encodeproject.org/files/ENCFF911LSH/@@download/ENCFF911LSH.bigBed hg19 released experiment not submitted to GEO ENCFF164HLQ bed narrowPeak optimal idr thresholded peaks ENCSR474CVP ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM28-human ENCAB257ANZ DNA False 2017-11-14 ENCODE 1, 3 ENCFF001TDO, ENCFF021ITV, ENCFF481CBF, ENCFF774YSI 350042 ENCODE Processing Pipeline 1b273fe39996dc7dc244c82058a4a083 https://www.encodeproject.org/files/ENCFF164HLQ/@@download/ENCFF164HLQ.bed.gz hg19 released experiment not submitted to GEO ENCFF079SQC bigWig signal p-value ENCSR474CVP ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM28-human ENCAB257ANZ DNA False 2017-11-14 ENCODE 3 ENCFF227IZS, ENCFF393YFX 1071642107 ENCODE Processing Pipeline 77db94f47119e2ad3b361a1a3e9dede8 https://www.encodeproject.org/files/ENCFF079SQC/@@download/ENCFF079SQC.bigWig GRCh38 released experiment not submitted to GEO ENCFF653YBH bigWig signal p-value ENCSR474CVP ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM28-human ENCAB257ANZ DNA False 2017-11-14 ENCODE 1 ENCFF064TLT, ENCFF581ZJL 953244028 ENCODE Processing Pipeline 5ce46382d49c3bc95c8ce0ba95be10b6 https://www.encodeproject.org/files/ENCFF653YBH/@@download/ENCFF653YBH.bigWig hg19 released experiment not submitted to GEO ENCFF165QYW bigWig fold change over control ENCSR474CVP ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM28-human ENCAB257ANZ DNA False 2017-11-14 ENCODE 1, 3 ENCFF051LWI, ENCFF064TLT, ENCFF367DJA, ENCFF581ZJL 2020156191 ENCODE Processing Pipeline 3a29efd180a863f3fb864a5a3282eebe https://www.encodeproject.org/files/ENCFF165QYW/@@download/ENCFF165QYW.bigWig hg19 released experiment not submitted to GEO ENCFF285SPK bigBed narrowPeak peaks ENCSR474CVP ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM28-human ENCAB257ANZ DNA False 2017-11-14 ENCODE 1, 3 ENCFF021ITV 13027584 ENCODE Processing Pipeline 1805d43e3adf738e0a02d00330548fa4 https://www.encodeproject.org/files/ENCFF285SPK/@@download/ENCFF285SPK.bigBed hg19 released experiment not submitted to GEO ENCFF730JPJ bigBed narrowPeak conservative idr thresholded peaks ENCSR474CVP ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM28-human ENCAB257ANZ DNA False 2017-11-14 ENCODE 1, 3 ENCFF580SYA 413978 ENCODE Processing Pipeline 2f59b2ecad9a247860d9188f5b7f23b5 https://www.encodeproject.org/files/ENCFF730JPJ/@@download/ENCFF730JPJ.bigBed GRCh38 released experiment not submitted to GEO ENCFF168KHS bed narrowPeak optimal idr thresholded peaks ENCSR474CVP ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM28-human ENCAB257ANZ DNA False 2017-11-14 ENCODE 1, 3 ENCFF131RPK, ENCFF247UNQ, ENCFF419RSJ, ENCFF478XNR 357398 ENCODE Processing Pipeline 40bc0db2f9230869b83ab1bf1cc6d264 https://www.encodeproject.org/files/ENCFF168KHS/@@download/ENCFF168KHS.bed.gz GRCh38 released experiment not submitted to GEO ENCFF774YSI bed narrowPeak peaks ENCSR474CVP ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM28-human ENCAB257ANZ DNA False 2017-11-14 ENCODE 3 ENCFF051LWI, ENCFF367DJA 6509231 ENCODE Processing Pipeline 07f7a12bd73ad380f2b0c5a211bb898c https://www.encodeproject.org/files/ENCFF774YSI/@@download/ENCFF774YSI.bed.gz hg19 released experiment not submitted to GEO ENCFF906BNB bed narrowPeak conservative idr thresholded peaks ENCSR474CVP ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM28-human ENCAB257ANZ DNA False 2017-11-14 ENCODE 1, 3 ENCFF001TDO, ENCFF021ITV, ENCFF481CBF, ENCFF774YSI 204527 ENCODE Processing Pipeline bb68e262d6e5a0d7c1348511735cf188 https://www.encodeproject.org/files/ENCFF906BNB/@@download/ENCFF906BNB.bed.gz hg19 released experiment not submitted to GEO ENCFF904FJE bigWig fold change over control ENCSR474CVP ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM28-human ENCAB257ANZ DNA False 2017-11-14 ENCODE 3 ENCFF051LWI, ENCFF367DJA 1104751721 ENCODE Processing Pipeline 6e952404cb301c6f3aaccf33c4ab6d8c https://www.encodeproject.org/files/ENCFF904FJE/@@download/ENCFF904FJE.bigWig hg19 released experiment not submitted to GEO ENCFF021ITV bed narrowPeak peaks ENCSR474CVP ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM28-human ENCAB257ANZ DNA False 2017-11-14 ENCODE 1, 3 ENCFF051LWI, ENCFF064TLT, ENCFF367DJA, ENCFF581ZJL 7206008 ENCODE Processing Pipeline b7b50a573dbbd6d4c5b979730f945560 https://www.encodeproject.org/files/ENCFF021ITV/@@download/ENCFF021ITV.bed.gz hg19 released experiment not submitted to GEO ENCFF691GNB bigWig fold change over control ENCSR474CVP ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM28-human ENCAB257ANZ DNA False 2017-11-14 ENCODE 3 ENCFF227IZS, ENCFF393YFX 1105967513 ENCODE Processing Pipeline 125d284ba306e53d3ab400bd4e2ac386 https://www.encodeproject.org/files/ENCFF691GNB/@@download/ENCFF691GNB.bigWig GRCh38 released experiment not submitted to GEO ENCFF481CBF bed narrowPeak peaks ENCSR474CVP ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM28-human ENCAB257ANZ DNA False 2017-11-14 ENCODE 1 ENCFF064TLT, ENCFF581ZJL 6923903 ENCODE Processing Pipeline bb2ded9a9d6cfd8870342e0797f3babb https://www.encodeproject.org/files/ENCFF481CBF/@@download/ENCFF481CBF.bed.gz hg19 released experiment not submitted to GEO ENCFF342OPJ bigBed narrowPeak peaks ENCSR474CVP ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM28-human ENCAB257ANZ DNA False 2017-11-14 ENCODE 3 ENCFF774YSI 13304454 ENCODE Processing Pipeline e553f57a855c93f62d62bac6ede5cc16 https://www.encodeproject.org/files/ENCFF342OPJ/@@download/ENCFF342OPJ.bigBed hg19 released experiment not submitted to GEO ENCFF231WEF bigWig signal p-value ENCSR474CVP ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM28-human ENCAB257ANZ DNA False 2017-11-14 ENCODE 1, 3 ENCFF227IZS, ENCFF393YFX, ENCFF882BOA, ENCFF910IKB 1813089715 ENCODE Processing Pipeline 7c388e9c99e5c2bf89f2af33bfa8626c https://www.encodeproject.org/files/ENCFF231WEF/@@download/ENCFF231WEF.bigWig GRCh38 released experiment not submitted to GEO ENCFF507TJE bigWig fold change over control ENCSR474CVP ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM28-human ENCAB257ANZ DNA False 2017-11-14 ENCODE 1, 3 ENCFF227IZS, ENCFF393YFX, ENCFF882BOA, ENCFF910IKB 2021661131 ENCODE Processing Pipeline a9136d6e2b9e9efa440513378a9fe659 https://www.encodeproject.org/files/ENCFF507TJE/@@download/ENCFF507TJE.bigWig GRCh38 released experiment not submitted to GEO ENCFF247UNQ bed narrowPeak peaks ENCSR474CVP ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM28-human ENCAB257ANZ DNA False 2017-11-14 ENCODE 1 ENCFF882BOA, ENCFF910IKB 6921841 ENCODE Processing Pipeline f01953cfa1e2c40769e4dc91c3e89976 https://www.encodeproject.org/files/ENCFF247UNQ/@@download/ENCFF247UNQ.bed.gz GRCh38 released experiment not submitted to GEO ENCFF478XNR bed narrowPeak peaks ENCSR474CVP ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM28-human ENCAB257ANZ DNA False 2017-11-14 ENCODE 3 ENCFF227IZS, ENCFF393YFX 6494853 ENCODE Processing Pipeline 4526062305b8853e6c7d8346d8ad3255 https://www.encodeproject.org/files/ENCFF478XNR/@@download/ENCFF478XNR.bed.gz GRCh38 released experiment not submitted to GEO ENCFF131RPK bed narrowPeak peaks ENCSR474CVP ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM28-human ENCAB257ANZ DNA False 2017-11-14 ENCODE 1, 3 ENCFF227IZS, ENCFF393YFX, ENCFF882BOA, ENCFF910IKB 7219070 ENCODE Processing Pipeline 80903198d454c98607dd51fe3cc7794a https://www.encodeproject.org/files/ENCFF131RPK/@@download/ENCFF131RPK.bed.gz GRCh38 released experiment not submitted to GEO ENCFF257GUM bigBed narrowPeak peaks ENCSR474CVP ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM28-human ENCAB257ANZ DNA False 2017-11-14 ENCODE 1 ENCFF247UNQ 13108432 ENCODE Processing Pipeline 2e20d2bc013dbee22ad90532d22789e4 https://www.encodeproject.org/files/ENCFF257GUM/@@download/ENCFF257GUM.bigBed GRCh38 released experiment not submitted to GEO ENCFF352PJR bigBed narrowPeak peaks ENCSR474CVP ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM28-human ENCAB257ANZ DNA False 2017-11-14 ENCODE 3 ENCFF478XNR 13299622 ENCODE Processing Pipeline e31719f119676ea8a155de82057ff603 https://www.encodeproject.org/files/ENCFF352PJR/@@download/ENCFF352PJR.bigBed GRCh38 released experiment not submitted to GEO ENCFF330MZH bigBed narrowPeak peaks ENCSR474CVP ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM28-human ENCAB257ANZ DNA False 2017-11-14 ENCODE 1, 3 ENCFF131RPK 13049592 ENCODE Processing Pipeline f9a669dba915deb4f03075c80b93b19c https://www.encodeproject.org/files/ENCFF330MZH/@@download/ENCFF330MZH.bigBed GRCh38 released experiment not submitted to GEO ENCFF580SYA bed narrowPeak conservative idr thresholded peaks ENCSR474CVP ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM28-human ENCAB257ANZ DNA False 2017-11-14 ENCODE 1, 3 ENCFF131RPK, ENCFF247UNQ, ENCFF419RSJ, ENCFF478XNR 206078 ENCODE Processing Pipeline 2e26bdd411b67117cddf1d48d47a47e6 https://www.encodeproject.org/files/ENCFF580SYA/@@download/ENCFF580SYA.bed.gz GRCh38 released experiment not submitted to GEO ENCFF671AKN bigBed narrowPeak optimal idr thresholded peaks ENCSR474CVP ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM28-human ENCAB257ANZ DNA False 2017-11-14 ENCODE 1, 3 ENCFF168KHS 755733 ENCODE Processing Pipeline 3d96c32bcc1bf20ac04371602b3764d6 https://www.encodeproject.org/files/ENCFF671AKN/@@download/ENCFF671AKN.bigBed GRCh38 released experiment not submitted to GEO ENCFF363IHB bam unfiltered alignments ENCSR552PSV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM2-human ENCAB220HTO DNA False 2018-01-26 ENCODE 1 100 ENCFF158WAX, ENCFF280MUX, ENCFF807MUK 7060969035 ENCODE Processing Pipeline 6f5e31bc4435f02be449258fda37b6c3 https://www.encodeproject.org/files/ENCFF363IHB/@@download/ENCFF363IHB.bam hg19 released experiment not submitted to GEO partially characterized antibody ENCFF216IMH bam unfiltered alignments ENCSR552PSV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM2-human ENCAB220HTO DNA False 2018-01-26 ENCODE 2 100 ENCFF274BMI, ENCFF692YLS, ENCFF807MUK 7551155234 ENCODE Processing Pipeline 224ccbb8dddb9e60fbd6a6d2dcbf5b9f https://www.encodeproject.org/files/ENCFF216IMH/@@download/ENCFF216IMH.bam hg19 released experiment not submitted to GEO partially characterized antibody ENCFF158WAX fastq reads ENCSR552PSV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM2-human ENCAB220HTO DNA False 2018-01-26 ENCODE 1 1 100 paired-ended 1 ENCFF280MUX 3183427570 Michael Snyder, Stanford 1a6fda24086d595dee4a17ece5448349 https://www.encodeproject.org/files/ENCFF158WAX/@@download/ENCFF158WAX.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFF/ released experiment not submitted to GEO partially characterized antibody ENCFF280MUX fastq reads ENCSR552PSV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM2-human ENCAB220HTO DNA False 2018-01-26 ENCODE 1 1 100 paired-ended 2 ENCFF158WAX 3321349107 Michael Snyder, Stanford e176096c0fe03bd9cd3457b24cf949f9 https://www.encodeproject.org/files/ENCFF280MUX/@@download/ENCFF280MUX.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFH/ released experiment not submitted to GEO partially characterized antibody ENCFF692YLS fastq reads ENCSR552PSV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM2-human ENCAB220HTO DNA False 2018-01-26 ENCODE 2 1 100 paired-ended 1 ENCFF274BMI 3407542048 Michael Snyder, Stanford b9cfbd69e268b95fa3e00442719357d4 https://www.encodeproject.org/files/ENCFF692YLS/@@download/ENCFF692YLS.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFF/ released experiment not submitted to GEO partially characterized antibody ENCFF274BMI fastq reads ENCSR552PSV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM2-human ENCAB220HTO DNA False 2018-01-26 ENCODE 2 1 100 paired-ended 2 ENCFF692YLS 3566611864 Michael Snyder, Stanford d0fe7114141c70d9bc6c1abc474d12ad https://www.encodeproject.org/files/ENCFF274BMI/@@download/ENCFF274BMI.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFH/ released experiment not submitted to GEO partially characterized antibody ENCFF463TFB bam alignments ENCSR552PSV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM2-human ENCAB220HTO DNA False 2018-01-26 ENCODE 1 100 ENCFF158WAX, ENCFF280MUX, ENCFF807MUK 5866524695 ENCODE Processing Pipeline 8462bfd8661da836ef80dbb493333ace https://www.encodeproject.org/files/ENCFF463TFB/@@download/ENCFF463TFB.bam hg19 released experiment not submitted to GEO partially characterized antibody ENCFF377LXP bam alignments ENCSR552PSV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM2-human ENCAB220HTO DNA False 2018-01-26 ENCODE 2 100 ENCFF274BMI, ENCFF692YLS, ENCFF807MUK 6319015355 ENCODE Processing Pipeline 0b57acabd7d0697c97d025244cb55906 https://www.encodeproject.org/files/ENCFF377LXP/@@download/ENCFF377LXP.bam hg19 released experiment not submitted to GEO partially characterized antibody ENCFF683WDG bigWig signal p-value ENCSR552PSV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM2-human ENCAB220HTO DNA False 2018-01-26 ENCODE 1 ENCFF463TFB, ENCFF581ZJL 1222039125 ENCODE Processing Pipeline e6333ebd40ca2b64d6180e00ec767afb https://www.encodeproject.org/files/ENCFF683WDG/@@download/ENCFF683WDG.bigWig hg19 released experiment not submitted to GEO partially characterized antibody ENCFF785JGY bigWig signal p-value ENCSR552PSV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM2-human ENCAB220HTO DNA False 2018-01-26 ENCODE 2 ENCFF377LXP, ENCFF581ZJL 1165673527 ENCODE Processing Pipeline 20d625f19fe4fbf7d86a8bf641d4da0c https://www.encodeproject.org/files/ENCFF785JGY/@@download/ENCFF785JGY.bigWig hg19 released experiment not submitted to GEO partially characterized antibody ENCFF899APE bigWig signal p-value ENCSR552PSV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM2-human ENCAB220HTO DNA False 2018-01-26 ENCODE 1, 2 ENCFF377LXP, ENCFF463TFB, ENCFF581ZJL 1590299393 ENCODE Processing Pipeline fde0067874e44bf59823cb667ca2d253 https://www.encodeproject.org/files/ENCFF899APE/@@download/ENCFF899APE.bigWig hg19 released experiment not submitted to GEO partially characterized antibody ENCFF362VIP bigWig fold change over control ENCSR552PSV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM2-human ENCAB220HTO DNA False 2018-01-26 ENCODE 1 ENCFF463TFB, ENCFF581ZJL 1417910045 ENCODE Processing Pipeline 9bd8ebe39a45ba3aa13ec9951c7e4df0 https://www.encodeproject.org/files/ENCFF362VIP/@@download/ENCFF362VIP.bigWig hg19 released experiment not submitted to GEO partially characterized antibody ENCFF736ESB bigWig fold change over control ENCSR552PSV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM2-human ENCAB220HTO DNA False 2018-01-26 ENCODE 2 ENCFF377LXP, ENCFF581ZJL 1485588802 ENCODE Processing Pipeline 2f9a70cdfd57c0bb8d0e72e4821af8e3 https://www.encodeproject.org/files/ENCFF736ESB/@@download/ENCFF736ESB.bigWig hg19 released experiment not submitted to GEO partially characterized antibody ENCFF498CGA bigWig fold change over control ENCSR552PSV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM2-human ENCAB220HTO DNA False 2018-01-26 ENCODE 1, 2 ENCFF377LXP, ENCFF463TFB, ENCFF581ZJL 2083849376 ENCODE Processing Pipeline fd4f5d488788692a4b87ab1ac9490699 https://www.encodeproject.org/files/ENCFF498CGA/@@download/ENCFF498CGA.bigWig hg19 released experiment not submitted to GEO partially characterized antibody ENCFF612RKY bed narrowPeak peaks ENCSR552PSV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM2-human ENCAB220HTO DNA False 2018-01-26 ENCODE 1 ENCFF463TFB, ENCFF581ZJL 6725703 ENCODE Processing Pipeline db56a1b97b1aaba7d7eb2ed370b55e66 https://www.encodeproject.org/files/ENCFF612RKY/@@download/ENCFF612RKY.bed.gz hg19 released experiment not submitted to GEO partially characterized antibody ENCFF322PWJ bed narrowPeak peaks ENCSR552PSV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM2-human ENCAB220HTO DNA False 2018-01-26 ENCODE 2 ENCFF377LXP, ENCFF581ZJL 6801753 ENCODE Processing Pipeline 2420fa96d885bfe037e9400bacf6af0d https://www.encodeproject.org/files/ENCFF322PWJ/@@download/ENCFF322PWJ.bed.gz hg19 released experiment not submitted to GEO partially characterized antibody ENCFF556DPZ bigBed narrowPeak peaks ENCSR552PSV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM2-human ENCAB220HTO DNA False 2018-01-26 ENCODE 1 ENCFF612RKY 11065467 ENCODE Processing Pipeline 5bd64ae9446bb7476ab14a870112504a https://www.encodeproject.org/files/ENCFF556DPZ/@@download/ENCFF556DPZ.bigBed hg19 released experiment not submitted to GEO partially characterized antibody ENCFF834QOU bed narrowPeak peaks ENCSR552PSV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM2-human ENCAB220HTO DNA False 2018-01-26 ENCODE 1, 2 ENCFF377LXP, ENCFF463TFB, ENCFF581ZJL 7178986 ENCODE Processing Pipeline 96d447e85b4ef8c371e1393c1fa6854d https://www.encodeproject.org/files/ENCFF834QOU/@@download/ENCFF834QOU.bed.gz hg19 released experiment not submitted to GEO partially characterized antibody ENCFF195UTQ bigBed narrowPeak peaks ENCSR552PSV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM2-human ENCAB220HTO DNA False 2018-01-26 ENCODE 2 ENCFF322PWJ 10991000 ENCODE Processing Pipeline b48ab7c3d302270b260e5ebf7f284e89 https://www.encodeproject.org/files/ENCFF195UTQ/@@download/ENCFF195UTQ.bigBed hg19 released experiment not submitted to GEO partially characterized antibody ENCFF370NUY bigBed narrowPeak conservative idr thresholded peaks ENCSR552PSV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM2-human ENCAB220HTO DNA False 2018-01-26 ENCODE 1, 2 ENCFF752JAM 163173 ENCODE Processing Pipeline 73272159341c34c86fbed7c438af256a https://www.encodeproject.org/files/ENCFF370NUY/@@download/ENCFF370NUY.bigBed hg19 released experiment not submitted to GEO partially characterized antibody ENCFF717HOX bigBed narrowPeak peaks ENCSR552PSV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM2-human ENCAB220HTO DNA False 2018-01-26 ENCODE 1, 2 ENCFF834QOU 10912787 ENCODE Processing Pipeline 68771aa12bc9e88177270a24f1b4ea94 https://www.encodeproject.org/files/ENCFF717HOX/@@download/ENCFF717HOX.bigBed hg19 released experiment not submitted to GEO partially characterized antibody ENCFF752JAM bed narrowPeak conservative idr thresholded peaks ENCSR552PSV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM2-human ENCAB220HTO DNA False 2018-01-26 ENCODE 1, 2 ENCFF001TDO, ENCFF322PWJ, ENCFF612RKY, ENCFF834QOU 59002 ENCODE Processing Pipeline b197727d7078588cc0f7bf634f26b8dc https://www.encodeproject.org/files/ENCFF752JAM/@@download/ENCFF752JAM.bed.gz hg19 released experiment not submitted to GEO partially characterized antibody ENCFF226CZE bed narrowPeak optimal idr thresholded peaks ENCSR552PSV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM2-human ENCAB220HTO DNA False 2018-01-26 ENCODE 1, 2 ENCFF001TDO, ENCFF322PWJ, ENCFF612RKY, ENCFF834QOU 88714 ENCODE Processing Pipeline 414496a7c317bfc3f9a776d9cde1d3d8 https://www.encodeproject.org/files/ENCFF226CZE/@@download/ENCFF226CZE.bed.gz hg19 released experiment not submitted to GEO partially characterized antibody ENCFF330RTU bigBed narrowPeak optimal idr thresholded peaks ENCSR552PSV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM2-human ENCAB220HTO DNA False 2018-01-26 ENCODE 1, 2 ENCFF226CZE 211656 ENCODE Processing Pipeline 8ea7c45231fb4447d24a071cb9e0755f https://www.encodeproject.org/files/ENCFF330RTU/@@download/ENCFF330RTU.bigBed hg19 released experiment not submitted to GEO partially characterized antibody ENCFF421TML bam unfiltered alignments ENCSR552PSV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM2-human ENCAB220HTO DNA False 2018-01-26 ENCODE 2 100 ENCFF274BMI, ENCFF643CGH, ENCFF692YLS 7561076430 ENCODE Processing Pipeline 4a9b8c98eebb74581ecbca6750498948 https://www.encodeproject.org/files/ENCFF421TML/@@download/ENCFF421TML.bam GRCh38 released experiment not submitted to GEO partially characterized antibody ENCFF174PUZ bam unfiltered alignments ENCSR552PSV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM2-human ENCAB220HTO DNA False 2018-01-26 ENCODE 1 100 ENCFF158WAX, ENCFF280MUX, ENCFF643CGH 7068910213 ENCODE Processing Pipeline b329bb89891af8efbe10f0cb832b61d2 https://www.encodeproject.org/files/ENCFF174PUZ/@@download/ENCFF174PUZ.bam GRCh38 released experiment not submitted to GEO partially characterized antibody ENCFF807MSB bam alignments ENCSR552PSV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM2-human ENCAB220HTO DNA False 2018-01-26 ENCODE 1 100 ENCFF158WAX, ENCFF280MUX, ENCFF643CGH 5874490254 ENCODE Processing Pipeline 1cc75dab13ed0cf6ded3c78cd0475ae5 https://www.encodeproject.org/files/ENCFF807MSB/@@download/ENCFF807MSB.bam GRCh38 released experiment not submitted to GEO partially characterized antibody ENCFF979DTV bam alignments ENCSR552PSV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM2-human ENCAB220HTO DNA False 2018-01-26 ENCODE 2 100 ENCFF274BMI, ENCFF643CGH, ENCFF692YLS 6328002171 ENCODE Processing Pipeline 317988f02bb4a143805e761ddc536e7d https://www.encodeproject.org/files/ENCFF979DTV/@@download/ENCFF979DTV.bam GRCh38 released experiment not submitted to GEO partially characterized antibody ENCFF967BBZ bigWig signal p-value ENCSR552PSV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM2-human ENCAB220HTO DNA False 2018-01-26 ENCODE 1 ENCFF807MSB, ENCFF910IKB 1490170625 ENCODE Processing Pipeline 5ad4aa246bcafa691a78eb0c9fa5f592 https://www.encodeproject.org/files/ENCFF967BBZ/@@download/ENCFF967BBZ.bigWig GRCh38 released experiment not submitted to GEO partially characterized antibody ENCFF083TUV bigWig signal p-value ENCSR552PSV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM2-human ENCAB220HTO DNA False 2018-01-26 ENCODE 2 ENCFF910IKB, ENCFF979DTV 1436372212 ENCODE Processing Pipeline a0ca3a1f956087468036dfdb4252a094 https://www.encodeproject.org/files/ENCFF083TUV/@@download/ENCFF083TUV.bigWig GRCh38 released experiment not submitted to GEO partially characterized antibody ENCFF062XGV bigWig signal p-value ENCSR552PSV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM2-human ENCAB220HTO DNA False 2018-01-26 ENCODE 1, 2 ENCFF807MSB, ENCFF910IKB, ENCFF979DTV 1531924271 ENCODE Processing Pipeline 446b2dc7d2f757191eb69e62781853a0 https://www.encodeproject.org/files/ENCFF062XGV/@@download/ENCFF062XGV.bigWig GRCh38 released experiment not submitted to GEO partially characterized antibody ENCFF691XPP bigWig fold change over control ENCSR552PSV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM2-human ENCAB220HTO DNA False 2018-01-26 ENCODE 1 ENCFF807MSB, ENCFF910IKB 1411019117 ENCODE Processing Pipeline 1d8045b3768d87c3907f92ac16b3f92f https://www.encodeproject.org/files/ENCFF691XPP/@@download/ENCFF691XPP.bigWig GRCh38 released experiment not submitted to GEO partially characterized antibody ENCFF639IKU bigWig fold change over control ENCSR552PSV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM2-human ENCAB220HTO DNA False 2018-01-26 ENCODE 2 ENCFF910IKB, ENCFF979DTV 1504307542 ENCODE Processing Pipeline e3319a717c7421dfd53c21f6c64cb970 https://www.encodeproject.org/files/ENCFF639IKU/@@download/ENCFF639IKU.bigWig GRCh38 released experiment not submitted to GEO partially characterized antibody ENCFF588FOZ bigWig fold change over control ENCSR552PSV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM2-human ENCAB220HTO DNA False 2018-01-26 ENCODE 1, 2 ENCFF807MSB, ENCFF910IKB, ENCFF979DTV 2069420529 ENCODE Processing Pipeline e84a466c806a41f31bb6ead3a4c1751e https://www.encodeproject.org/files/ENCFF588FOZ/@@download/ENCFF588FOZ.bigWig GRCh38 released experiment not submitted to GEO partially characterized antibody ENCFF210QMU bed narrowPeak peaks ENCSR552PSV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM2-human ENCAB220HTO DNA False 2018-01-26 ENCODE 2 ENCFF910IKB, ENCFF979DTV 6691999 ENCODE Processing Pipeline 5fbd24a407134951a8f14858de24123b https://www.encodeproject.org/files/ENCFF210QMU/@@download/ENCFF210QMU.bed.gz GRCh38 released experiment not submitted to GEO partially characterized antibody ENCFF996OQL bed narrowPeak peaks ENCSR552PSV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM2-human ENCAB220HTO DNA False 2018-01-26 ENCODE 1, 2 ENCFF807MSB, ENCFF910IKB, ENCFF979DTV 7168354 ENCODE Processing Pipeline 16862f76e8dff1b979ca951644a594e0 https://www.encodeproject.org/files/ENCFF996OQL/@@download/ENCFF996OQL.bed.gz GRCh38 released experiment not submitted to GEO partially characterized antibody ENCFF080FCQ bigBed narrowPeak peaks ENCSR552PSV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM2-human ENCAB220HTO DNA False 2018-01-26 ENCODE 2 ENCFF210QMU 11013457 ENCODE Processing Pipeline 0f31d1bc104b10b462ccdd27ad9ee597 https://www.encodeproject.org/files/ENCFF080FCQ/@@download/ENCFF080FCQ.bigBed GRCh38 released experiment not submitted to GEO partially characterized antibody ENCFF012HFO bigBed narrowPeak peaks ENCSR552PSV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM2-human ENCAB220HTO DNA False 2018-01-26 ENCODE 1, 2 ENCFF996OQL 10933553 ENCODE Processing Pipeline eec6c561d130b79c35833d6afa5c8891 https://www.encodeproject.org/files/ENCFF012HFO/@@download/ENCFF012HFO.bigBed GRCh38 released experiment not submitted to GEO partially characterized antibody ENCFF461KDN bed narrowPeak peaks ENCSR552PSV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM2-human ENCAB220HTO DNA False 2018-01-26 ENCODE 1 ENCFF807MSB, ENCFF910IKB 6604673 ENCODE Processing Pipeline 64ac36cfc702913c619e638fc7715999 https://www.encodeproject.org/files/ENCFF461KDN/@@download/ENCFF461KDN.bed.gz GRCh38 released experiment not submitted to GEO partially characterized antibody ENCFF598XBF bigBed narrowPeak peaks ENCSR552PSV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM2-human ENCAB220HTO DNA False 2018-01-26 ENCODE 1 ENCFF461KDN 11080880 ENCODE Processing Pipeline 95a12e6527ce020c8d10d96f01c23796 https://www.encodeproject.org/files/ENCFF598XBF/@@download/ENCFF598XBF.bigBed GRCh38 released experiment not submitted to GEO partially characterized antibody ENCFF518FZC bigBed narrowPeak optimal idr thresholded peaks ENCSR552PSV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM2-human ENCAB220HTO DNA False 2018-01-26 ENCODE 1, 2 ENCFF571REC 212513 ENCODE Processing Pipeline fb84bd4aab41fa4360c1597089199a6a https://www.encodeproject.org/files/ENCFF518FZC/@@download/ENCFF518FZC.bigBed GRCh38 released experiment not submitted to GEO partially characterized antibody ENCFF843VNZ bed narrowPeak conservative idr thresholded peaks ENCSR552PSV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM2-human ENCAB220HTO DNA False 2018-01-26 ENCODE 1, 2 ENCFF210QMU, ENCFF419RSJ, ENCFF461KDN, ENCFF996OQL 57701 ENCODE Processing Pipeline 19c3d3c499fd90a8fdd131f2fa81bf77 https://www.encodeproject.org/files/ENCFF843VNZ/@@download/ENCFF843VNZ.bed.gz GRCh38 released experiment not submitted to GEO partially characterized antibody ENCFF513VKI bigBed narrowPeak conservative idr thresholded peaks ENCSR552PSV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM2-human ENCAB220HTO DNA False 2018-01-26 ENCODE 1, 2 ENCFF843VNZ 166126 ENCODE Processing Pipeline bf318c9263445ac82362a6f8ff98d2a2 https://www.encodeproject.org/files/ENCFF513VKI/@@download/ENCFF513VKI.bigBed GRCh38 released experiment not submitted to GEO partially characterized antibody ENCFF571REC bed narrowPeak optimal idr thresholded peaks ENCSR552PSV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM2-human ENCAB220HTO DNA False 2018-01-26 ENCODE 1, 2 ENCFF210QMU, ENCFF419RSJ, ENCFF461KDN, ENCFF996OQL 85800 ENCODE Processing Pipeline a7b1a93ff1be9fe1e4061bc81ca45305 https://www.encodeproject.org/files/ENCFF571REC/@@download/ENCFF571REC.bed.gz GRCh38 released experiment not submitted to GEO partially characterized antibody ENCFF676ZCH bam unfiltered alignments ENCSR167KBO ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF316-human ENCAB363ALA DNA False 2016-11-10 ENCODE 2 100 ENCFF228VAR, ENCFF739VNU, ENCFF807MUK 8253213555 ENCODE Processing Pipeline 384eb498b83f30b43cbe3db460bff85e https://www.encodeproject.org/files/ENCFF676ZCH/@@download/ENCFF676ZCH.bam hg19 released ENCFF143KYV bam unfiltered alignments ENCSR167KBO ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF316-human ENCAB363ALA DNA False 2016-11-10 ENCODE 1 100 ENCFF107ZQT, ENCFF387RWU, ENCFF807MUK 7757321479 ENCODE Processing Pipeline b16934ed55c26d4d3ff227d848d416c3 https://www.encodeproject.org/files/ENCFF143KYV/@@download/ENCFF143KYV.bam hg19 released ENCFF387RWU fastq reads ENCSR167KBO ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF316-human ENCAB363ALA DNA False 2016-11-10 ENCODE 1 1 100 paired-ended 1 ENCFF107ZQT 3671651858 Michael Snyder, Stanford 5f5ee8e25261eaeedfb742c429c89222 SRA:SRR5111212 https://www.encodeproject.org/files/ENCFF387RWU/@@download/ENCFF387RWU.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFF/ released ENCFF739VNU fastq reads ENCSR167KBO ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF316-human ENCAB363ALA DNA False 2016-11-10 ENCODE 2 1 100 paired-ended 2 ENCFF228VAR 3977254650 Michael Snyder, Stanford bc6b440968652f36c99716aad14350a2 SRA:SRR5111211 https://www.encodeproject.org/files/ENCFF739VNU/@@download/ENCFF739VNU.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFA/ released ENCFF107ZQT fastq reads ENCSR167KBO ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF316-human ENCAB363ALA DNA False 2016-11-10 ENCODE 1 1 100 paired-ended 2 ENCFF387RWU 3723682364 Michael Snyder, Stanford 9ee989dd92c9999058f51422d55eb4f0 SRA:SRR5111212 https://www.encodeproject.org/files/ENCFF107ZQT/@@download/ENCFF107ZQT.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFH/ released ENCFF228VAR fastq reads ENCSR167KBO ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF316-human ENCAB363ALA DNA False 2016-11-10 ENCODE 2 1 100 paired-ended 1 ENCFF739VNU 3919404298 Michael Snyder, Stanford 54b8bf503656adb77f558c759dd27df6 SRA:SRR5111211 https://www.encodeproject.org/files/ENCFF228VAR/@@download/ENCFF228VAR.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFD/ released ENCFF585HLM bam alignments ENCSR167KBO ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF316-human ENCAB363ALA DNA False 2016-11-10 ENCODE 2 100 ENCFF228VAR, ENCFF739VNU, ENCFF807MUK 6658346880 ENCODE Processing Pipeline e133facfb594a320982d5c025409c03b https://www.encodeproject.org/files/ENCFF585HLM/@@download/ENCFF585HLM.bam hg19 released ENCFF261IPD bam alignments ENCSR167KBO ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF316-human ENCAB363ALA DNA False 2016-11-10 ENCODE 1 100 ENCFF107ZQT, ENCFF387RWU, ENCFF807MUK 6279949494 ENCODE Processing Pipeline 6319567efd8df69f66d27887647b2498 https://www.encodeproject.org/files/ENCFF261IPD/@@download/ENCFF261IPD.bam hg19 released ENCFF496WPJ bigWig signal p-value ENCSR167KBO ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF316-human ENCAB363ALA DNA False 2016-11-10 ENCODE 1 ENCFF261IPD, ENCFF581ZJL 1258307293 ENCODE Processing Pipeline 854076d790aaf223390fda018bc17785 https://www.encodeproject.org/files/ENCFF496WPJ/@@download/ENCFF496WPJ.bigWig hg19 released ENCFF597QLR bigWig signal p-value ENCSR167KBO ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF316-human ENCAB363ALA DNA False 2016-11-10 ENCODE 2 ENCFF051LWI, ENCFF585HLM 1364828356 ENCODE Processing Pipeline 1be10d9256cdce2ac639c94abcd41227 https://www.encodeproject.org/files/ENCFF597QLR/@@download/ENCFF597QLR.bigWig hg19 released ENCFF261RZN bigWig signal p-value ENCSR167KBO ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF316-human ENCAB363ALA DNA False 2016-11-10 ENCODE 1, 2 ENCFF051LWI, ENCFF261IPD, ENCFF581ZJL, ENCFF585HLM 2225534491 ENCODE Processing Pipeline 095364129558be8d00b99e4a2b82078e https://www.encodeproject.org/files/ENCFF261RZN/@@download/ENCFF261RZN.bigWig hg19 released ENCFF773LGC bigWig fold change over control ENCSR167KBO ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF316-human ENCAB363ALA DNA False 2016-11-10 ENCODE 1 ENCFF261IPD, ENCFF581ZJL 1431662378 ENCODE Processing Pipeline 2ac8182019c4e3f4ff8f293f3d8ec05c https://www.encodeproject.org/files/ENCFF773LGC/@@download/ENCFF773LGC.bigWig hg19 released ENCFF196ZGI bigWig fold change over control ENCSR167KBO ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF316-human ENCAB363ALA DNA False 2016-11-10 ENCODE 2 ENCFF051LWI, ENCFF585HLM 1412071854 ENCODE Processing Pipeline 58dc8693ffd8c6ba5b6aa9ae815a1790 https://www.encodeproject.org/files/ENCFF196ZGI/@@download/ENCFF196ZGI.bigWig hg19 released ENCFF617XZE bigWig fold change over control ENCSR167KBO ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF316-human ENCAB363ALA DNA False 2016-11-10 ENCODE 1, 2 ENCFF051LWI, ENCFF261IPD, ENCFF581ZJL, ENCFF585HLM 2403761406 ENCODE Processing Pipeline 851ab784bfc669933d7ae463997f85a8 https://www.encodeproject.org/files/ENCFF617XZE/@@download/ENCFF617XZE.bigWig hg19 released ENCFF792BGD bed narrowPeak peaks ENCSR167KBO ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF316-human ENCAB363ALA DNA False 2016-11-10 ENCODE 1 ENCFF261IPD, ENCFF581ZJL 7131811 ENCODE Processing Pipeline 67d81b44082df3acf776e6da2c5fab41 https://www.encodeproject.org/files/ENCFF792BGD/@@download/ENCFF792BGD.bed.gz hg19 released ENCFF247ZEK bed narrowPeak peaks ENCSR167KBO ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF316-human ENCAB363ALA DNA False 2016-11-10 ENCODE 2 ENCFF051LWI, ENCFF585HLM 7215524 ENCODE Processing Pipeline 568aa4401b01bb57d232d82928afe0d4 https://www.encodeproject.org/files/ENCFF247ZEK/@@download/ENCFF247ZEK.bed.gz hg19 released ENCFF657HIZ bigBed narrowPeak peaks ENCSR167KBO ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF316-human ENCAB363ALA DNA False 2016-11-10 ENCODE 1, 2 ENCFF226IEC 14496030 ENCODE Processing Pipeline fd8c8f549ca377456ccba8eed0d33bd3 https://www.encodeproject.org/files/ENCFF657HIZ/@@download/ENCFF657HIZ.bigBed hg19 released ENCFF663HVK bed narrowPeak conservative idr thresholded peaks ENCSR167KBO ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF316-human ENCAB363ALA DNA False 2016-11-10 ENCODE 1, 2 ENCFF001TDO, ENCFF226IEC, ENCFF247ZEK, ENCFF792BGD 1153076 ENCODE Processing Pipeline a5c27b4a3d369bf4c1c5c75e02b57645 https://www.encodeproject.org/files/ENCFF663HVK/@@download/ENCFF663HVK.bed.gz hg19 released ENCFF226IEC bed narrowPeak peaks ENCSR167KBO ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF316-human ENCAB363ALA DNA False 2016-11-10 ENCODE 1, 2 ENCFF051LWI, ENCFF261IPD, ENCFF581ZJL, ENCFF585HLM 7331628 ENCODE Processing Pipeline bb7ab94faf3c35c0751195507dbfaf7e https://www.encodeproject.org/files/ENCFF226IEC/@@download/ENCFF226IEC.bed.gz hg19 released ENCFF370DLZ bigBed narrowPeak peaks ENCSR167KBO ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF316-human ENCAB363ALA DNA False 2016-11-10 ENCODE 2 ENCFF247ZEK 13807133 ENCODE Processing Pipeline b8ae56c5010f0f07e2cbd693cc424d0e https://www.encodeproject.org/files/ENCFF370DLZ/@@download/ENCFF370DLZ.bigBed hg19 released ENCFF357RFK bigBed narrowPeak peaks ENCSR167KBO ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF316-human ENCAB363ALA DNA False 2016-11-10 ENCODE 1 ENCFF792BGD 11738525 ENCODE Processing Pipeline 81ee7906ad961271babfd5956f45fd57 https://www.encodeproject.org/files/ENCFF357RFK/@@download/ENCFF357RFK.bigBed hg19 released ENCFF524KZK bigBed narrowPeak conservative idr thresholded peaks ENCSR167KBO ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF316-human ENCAB363ALA DNA False 2016-11-10 ENCODE 1, 2 ENCFF663HVK 2382122 ENCODE Processing Pipeline 582434a083848124a5ed5df87b71182c https://www.encodeproject.org/files/ENCFF524KZK/@@download/ENCFF524KZK.bigBed hg19 released ENCFF132YVG bigBed narrowPeak optimal idr thresholded peaks ENCSR167KBO ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF316-human ENCAB363ALA DNA False 2016-11-10 ENCODE 1, 2 ENCFF788EBS 2963586 ENCODE Processing Pipeline 482ab73e971d57b177fe9724e51a002a https://www.encodeproject.org/files/ENCFF132YVG/@@download/ENCFF132YVG.bigBed hg19 released ENCFF788EBS bed narrowPeak optimal idr thresholded peaks ENCSR167KBO ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF316-human ENCAB363ALA DNA False 2016-11-10 ENCODE 1, 2 ENCFF001TDO, ENCFF226IEC, ENCFF247ZEK, ENCFF792BGD 1540943 ENCODE Processing Pipeline 3a0d9fd7b87bc7f13bbf44c634b50a0c https://www.encodeproject.org/files/ENCFF788EBS/@@download/ENCFF788EBS.bed.gz hg19 released ENCFF325LLQ bam unfiltered alignments ENCSR167KBO ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF316-human ENCAB363ALA DNA False 2016-11-10 ENCODE 1 100 ENCFF107ZQT, ENCFF387RWU, ENCFF643CGH 7760666288 ENCODE Processing Pipeline b9bbe96315c8fa60734bf39bb4ce64a6 https://www.encodeproject.org/files/ENCFF325LLQ/@@download/ENCFF325LLQ.bam GRCh38 released ENCFF750YXZ bam unfiltered alignments ENCSR167KBO ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF316-human ENCAB363ALA DNA False 2016-11-10 ENCODE 2 100 ENCFF228VAR, ENCFF643CGH, ENCFF739VNU 8256147651 ENCODE Processing Pipeline 1c7cf27a59291ce2bb36087f3bcb4b86 https://www.encodeproject.org/files/ENCFF750YXZ/@@download/ENCFF750YXZ.bam GRCh38 released ENCFF267EEY bam alignments ENCSR167KBO ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF316-human ENCAB363ALA DNA False 2016-11-10 ENCODE 1 100 ENCFF107ZQT, ENCFF387RWU, ENCFF643CGH 6284754107 ENCODE Processing Pipeline a1d81d1804b2e04a8d732640fe2f8fc3 https://www.encodeproject.org/files/ENCFF267EEY/@@download/ENCFF267EEY.bam GRCh38 released ENCFF908CYX bam alignments ENCSR167KBO ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF316-human ENCAB363ALA DNA False 2016-11-10 ENCODE 2 100 ENCFF228VAR, ENCFF643CGH, ENCFF739VNU 6663598439 ENCODE Processing Pipeline b1ca9d91bb1c1f8e9e9283f47224c9c3 https://www.encodeproject.org/files/ENCFF908CYX/@@download/ENCFF908CYX.bam GRCh38 released ENCFF522CRP bigWig signal p-value ENCSR167KBO ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF316-human ENCAB363ALA DNA False 2016-11-10 ENCODE 1 ENCFF267EEY, ENCFF910IKB 1217745692 ENCODE Processing Pipeline 542aaaa4a33c16e4883f2bfed4409ec1 https://www.encodeproject.org/files/ENCFF522CRP/@@download/ENCFF522CRP.bigWig GRCh38 released ENCFF020JZW bigWig signal p-value ENCSR167KBO ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF316-human ENCAB363ALA DNA False 2016-11-10 ENCODE 2 ENCFF227IZS, ENCFF908CYX 1076641173 ENCODE Processing Pipeline bb2abdf5ac05acab7ccd53024da9aaa6 https://www.encodeproject.org/files/ENCFF020JZW/@@download/ENCFF020JZW.bigWig GRCh38 released ENCFF961YUC bigWig signal p-value ENCSR167KBO ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF316-human ENCAB363ALA DNA False 2016-11-10 ENCODE 1, 2 ENCFF227IZS, ENCFF267EEY, ENCFF908CYX, ENCFF910IKB 1896676355 ENCODE Processing Pipeline 33eae407551e769e20ed7204299b6757 https://www.encodeproject.org/files/ENCFF961YUC/@@download/ENCFF961YUC.bigWig GRCh38 released ENCFF611OPH bigWig fold change over control ENCSR167KBO ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF316-human ENCAB363ALA DNA False 2016-11-10 ENCODE 1 ENCFF267EEY, ENCFF910IKB 1406795425 ENCODE Processing Pipeline 3289c27c1032fd4440481dfcc993e608 https://www.encodeproject.org/files/ENCFF611OPH/@@download/ENCFF611OPH.bigWig GRCh38 released ENCFF897JUI bigWig fold change over control ENCSR167KBO ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF316-human ENCAB363ALA DNA False 2016-11-10 ENCODE 2 ENCFF227IZS, ENCFF908CYX 1426745808 ENCODE Processing Pipeline 9744871c8067141675b384597e2555a5 https://www.encodeproject.org/files/ENCFF897JUI/@@download/ENCFF897JUI.bigWig GRCh38 released ENCFF911IYO bigWig fold change over control ENCSR167KBO ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF316-human ENCAB363ALA DNA False 2016-11-10 ENCODE 1, 2 ENCFF227IZS, ENCFF267EEY, ENCFF908CYX, ENCFF910IKB 2393380952 ENCODE Processing Pipeline 2d740ac593e4ffbe2ef740b71bf973f2 https://www.encodeproject.org/files/ENCFF911IYO/@@download/ENCFF911IYO.bigWig GRCh38 released ENCFF777HYZ bed narrowPeak peaks ENCSR167KBO ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF316-human ENCAB363ALA DNA False 2016-11-10 ENCODE 1 ENCFF267EEY, ENCFF910IKB 7103899 ENCODE Processing Pipeline e5ffbe0a27bfbd5c0be17af87777aa1c https://www.encodeproject.org/files/ENCFF777HYZ/@@download/ENCFF777HYZ.bed.gz GRCh38 released ENCFF953GBT bed narrowPeak peaks ENCSR167KBO ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF316-human ENCAB363ALA DNA False 2016-11-10 ENCODE 2 ENCFF227IZS, ENCFF908CYX 7165573 ENCODE Processing Pipeline df1fb8a13c4ca361d6e42485219b29f3 https://www.encodeproject.org/files/ENCFF953GBT/@@download/ENCFF953GBT.bed.gz GRCh38 released ENCFF885VGV bed narrowPeak peaks ENCSR167KBO ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF316-human ENCAB363ALA DNA False 2016-11-10 ENCODE 1, 2 ENCFF227IZS, ENCFF267EEY, ENCFF908CYX, ENCFF910IKB 7269569 ENCODE Processing Pipeline 476140cf9f2e9a47e8557079ee0016c7 https://www.encodeproject.org/files/ENCFF885VGV/@@download/ENCFF885VGV.bed.gz GRCh38 released ENCFF915YDB bigBed narrowPeak peaks ENCSR167KBO ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF316-human ENCAB363ALA DNA False 2016-11-10 ENCODE 1 ENCFF777HYZ 11759732 ENCODE Processing Pipeline 7210810e88391a268ee19c014457c10c https://www.encodeproject.org/files/ENCFF915YDB/@@download/ENCFF915YDB.bigBed GRCh38 released ENCFF869MPV bigBed narrowPeak peaks ENCSR167KBO ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF316-human ENCAB363ALA DNA False 2016-11-10 ENCODE 2 ENCFF953GBT 13788096 ENCODE Processing Pipeline aa6f5d44d4fead0772a2c9946b35c239 https://www.encodeproject.org/files/ENCFF869MPV/@@download/ENCFF869MPV.bigBed GRCh38 released ENCFF739TIS bigBed narrowPeak peaks ENCSR167KBO ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF316-human ENCAB363ALA DNA False 2016-11-10 ENCODE 1, 2 ENCFF885VGV 14431187 ENCODE Processing Pipeline 16a7629372b844eabdc6b1cd1e02ae8c https://www.encodeproject.org/files/ENCFF739TIS/@@download/ENCFF739TIS.bigBed GRCh38 released ENCFF195JOB bed narrowPeak conservative idr thresholded peaks ENCSR167KBO ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF316-human ENCAB363ALA DNA False 2016-11-10 ENCODE 1, 2 ENCFF419RSJ, ENCFF777HYZ, ENCFF885VGV, ENCFF953GBT 1133273 ENCODE Processing Pipeline d54b5396de6029343654fc861b3da713 https://www.encodeproject.org/files/ENCFF195JOB/@@download/ENCFF195JOB.bed.gz GRCh38 released ENCFF492OAR bigBed narrowPeak conservative idr thresholded peaks ENCSR167KBO ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF316-human ENCAB363ALA DNA False 2016-11-10 ENCODE 1, 2 ENCFF195JOB 2353801 ENCODE Processing Pipeline 728250d2085e459162414fab5e1a6abd https://www.encodeproject.org/files/ENCFF492OAR/@@download/ENCFF492OAR.bigBed GRCh38 released ENCFF806GUF bed narrowPeak optimal idr thresholded peaks ENCSR167KBO ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF316-human ENCAB363ALA DNA False 2016-11-10 ENCODE 1, 2 ENCFF419RSJ, ENCFF777HYZ, ENCFF885VGV, ENCFF953GBT 1520737 ENCODE Processing Pipeline 1dba0952313fc92e69d70299249b4b11 https://www.encodeproject.org/files/ENCFF806GUF/@@download/ENCFF806GUF.bed.gz GRCh38 released ENCFF882UCV bigBed narrowPeak optimal idr thresholded peaks ENCSR167KBO ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF316-human ENCAB363ALA DNA False 2016-11-10 ENCODE 1, 2 ENCFF806GUF 2935941 ENCODE Processing Pipeline 9d1798b9e7baa1bd4eb6019f970587d9 https://www.encodeproject.org/files/ENCFF882UCV/@@download/ENCFF882UCV.bigBed GRCh38 released ENCFF885QFW bam unfiltered alignments ENCSR298JCG ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOR1-human ENCAB805KAO DNA False 2016-11-17 ENCODE 2 100 ENCFF241ADB, ENCFF417KCI, ENCFF807MUK 3835743428 ENCODE Processing Pipeline 5cf99357157df2a32c6c879b9a4f7a42 https://www.encodeproject.org/files/ENCFF885QFW/@@download/ENCFF885QFW.bam hg19 released low read depth missing control alignments ENCFF417KCI fastq reads ENCSR298JCG ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOR1-human ENCAB805KAO DNA False 2016-11-17 ENCODE 2 1 100 paired-ended 1 ENCFF241ADB 1706397503 Michael Snyder, Stanford e1a36dab1b099c596c6600c93e6af910 SRA:SRR5111384 https://www.encodeproject.org/files/ENCFF417KCI/@@download/ENCFF417KCI.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFD/ released low read depth missing control alignments ENCFF241ADB fastq reads ENCSR298JCG ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOR1-human ENCAB805KAO DNA False 2016-11-17 ENCODE 2 1 100 paired-ended 2 ENCFF417KCI 1754283124 Michael Snyder, Stanford 85a84cd607dbce691dae826b92e5b28d SRA:SRR5111384 https://www.encodeproject.org/files/ENCFF241ADB/@@download/ENCFF241ADB.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFA/ released low read depth missing control alignments ENCFF491SHN bam alignments ENCSR298JCG ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOR1-human ENCAB805KAO DNA False 2016-11-17 ENCODE 2 100 ENCFF241ADB, ENCFF417KCI, ENCFF807MUK 3204494593 ENCODE Processing Pipeline 9dfc9b0a8c4ebbb283ddbad1827a07ca https://www.encodeproject.org/files/ENCFF491SHN/@@download/ENCFF491SHN.bam hg19 released low read depth missing control alignments ENCFF979ZZF fastq reads ENCSR298JCG ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOR1-human ENCAB805KAO DNA False 2016-11-17 ENCODE 1 1 100 paired-ended 1 ENCFF253UMC 1874870319 Michael Snyder, Stanford ef6ba3f3c0b7b73c4e1de039ebd8f3e9 SRA:SRR5111385 https://www.encodeproject.org/files/ENCFF979ZZF/@@download/ENCFF979ZZF.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFF/ released low read depth missing control alignments ENCFF253UMC fastq reads ENCSR298JCG ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOR1-human ENCAB805KAO DNA False 2016-11-17 ENCODE 1 1 100 paired-ended 2 ENCFF979ZZF 1922885689 Michael Snyder, Stanford a9fc5e0d36c17ee18feed38ad7e62f7b SRA:SRR5111385 https://www.encodeproject.org/files/ENCFF253UMC/@@download/ENCFF253UMC.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFH/ released low read depth missing control alignments ENCFF481BWV bam unfiltered alignments ENCSR298JCG ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOR1-human ENCAB805KAO DNA False 2016-11-17 ENCODE 1 100 ENCFF253UMC, ENCFF807MUK, ENCFF979ZZF 4195802543 ENCODE Processing Pipeline 20270588bc5b0a4adc926cb4cf7867d3 https://www.encodeproject.org/files/ENCFF481BWV/@@download/ENCFF481BWV.bam hg19 released low read depth missing control alignments ENCFF252BMK bam alignments ENCSR298JCG ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOR1-human ENCAB805KAO DNA False 2016-11-17 ENCODE 1 100 ENCFF253UMC, ENCFF807MUK, ENCFF979ZZF 3535728206 ENCODE Processing Pipeline f7ff08cbac609058ca20d48d99ffc643 https://www.encodeproject.org/files/ENCFF252BMK/@@download/ENCFF252BMK.bam hg19 released low read depth missing control alignments ENCFF905LBF bam unfiltered alignments ENCSR298JCG ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOR1-human ENCAB805KAO DNA False 2016-11-17 ENCODE 1 100 ENCFF253UMC, ENCFF643CGH, ENCFF979ZZF 4199978691 ENCODE Processing Pipeline f647049e649f891dfc4068e7e19c8b87 https://www.encodeproject.org/files/ENCFF905LBF/@@download/ENCFF905LBF.bam GRCh38 released low read depth missing control alignments ENCFF456UFJ bam unfiltered alignments ENCSR298JCG ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOR1-human ENCAB805KAO DNA False 2016-11-17 ENCODE 2 100 ENCFF241ADB, ENCFF417KCI, ENCFF643CGH 3839338314 ENCODE Processing Pipeline e453bfd62257e1c5c8bc02690608a188 https://www.encodeproject.org/files/ENCFF456UFJ/@@download/ENCFF456UFJ.bam GRCh38 released low read depth missing control alignments ENCFF247FGI bam alignments ENCSR298JCG ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOR1-human ENCAB805KAO DNA False 2016-11-17 ENCODE 2 100 ENCFF241ADB, ENCFF417KCI, ENCFF643CGH 3206495725 ENCODE Processing Pipeline cd6e60221edbe81057907ded3f2db369 https://www.encodeproject.org/files/ENCFF247FGI/@@download/ENCFF247FGI.bam GRCh38 released low read depth missing control alignments ENCFF488BQX bam alignments ENCSR298JCG ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOR1-human ENCAB805KAO DNA False 2016-11-17 ENCODE 1 100 ENCFF253UMC, ENCFF643CGH, ENCFF979ZZF 3538220359 ENCODE Processing Pipeline 144d8f477b45f9b045b4c4ef4c742b60 https://www.encodeproject.org/files/ENCFF488BQX/@@download/ENCFF488BQX.bam GRCh38 released low read depth missing control alignments ENCFF604FVF bigWig signal p-value ENCSR298JCG ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOR1-human ENCAB805KAO DNA False 2016-11-17 ENCODE 2 ENCFF247FGI 939105655 ENCODE Processing Pipeline f8b15634347edbd43092fee62ee23f92 https://www.encodeproject.org/files/ENCFF604FVF/@@download/ENCFF604FVF.bigWig GRCh38 released low read depth missing control alignments ENCFF212AVX bigWig signal p-value ENCSR298JCG ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOR1-human ENCAB805KAO DNA False 2016-11-17 ENCODE 1, 2 ENCFF247FGI, ENCFF488BQX 1589553952 ENCODE Processing Pipeline f99c4479e11012bdc8ea15c650c918b0 https://www.encodeproject.org/files/ENCFF212AVX/@@download/ENCFF212AVX.bigWig GRCh38 released low read depth missing control alignments ENCFF069EVI bigWig fold change over control ENCSR298JCG ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOR1-human ENCAB805KAO DNA False 2016-11-17 ENCODE 1 ENCFF488BQX 1118692882 ENCODE Processing Pipeline c9f8c8cdb0e0c809946e0ff9afdba127 https://www.encodeproject.org/files/ENCFF069EVI/@@download/ENCFF069EVI.bigWig GRCh38 released low read depth missing control alignments ENCFF227BJZ bigWig signal p-value ENCSR298JCG ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOR1-human ENCAB805KAO DNA False 2016-11-17 ENCODE 1 ENCFF488BQX 1118314562 ENCODE Processing Pipeline 1584c77d93b8d1b2b57619472d4b48dc https://www.encodeproject.org/files/ENCFF227BJZ/@@download/ENCFF227BJZ.bigWig GRCh38 released low read depth missing control alignments ENCFF200ZNJ bigWig fold change over control ENCSR298JCG ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOR1-human ENCAB805KAO DNA False 2016-11-17 ENCODE 1, 2 ENCFF247FGI, ENCFF488BQX 1987691956 ENCODE Processing Pipeline c351e740da5e35ebd5ea3e9bd1366fd6 https://www.encodeproject.org/files/ENCFF200ZNJ/@@download/ENCFF200ZNJ.bigWig GRCh38 released low read depth missing control alignments ENCFF605VEC bigWig fold change over control ENCSR298JCG ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOR1-human ENCAB805KAO DNA False 2016-11-17 ENCODE 2 ENCFF247FGI 1038334735 ENCODE Processing Pipeline f22b76982440fc4a249943f6ca872585 https://www.encodeproject.org/files/ENCFF605VEC/@@download/ENCFF605VEC.bigWig GRCh38 released low read depth missing control alignments ENCFF829KOI bed narrowPeak peaks ENCSR298JCG ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOR1-human ENCAB805KAO DNA False 2016-11-17 ENCODE 2 ENCFF247FGI 6523130 ENCODE Processing Pipeline a61313938b97b417a8b64b95393e2417 https://www.encodeproject.org/files/ENCFF829KOI/@@download/ENCFF829KOI.bed.gz GRCh38 released low read depth missing control alignments ENCFF638IIC bed narrowPeak optimal idr thresholded peaks ENCSR298JCG ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOR1-human ENCAB805KAO DNA False 2016-11-17 ENCODE 1, 2 ENCFF266OPP, ENCFF419RSJ, ENCFF473CGS, ENCFF829KOI 168899 ENCODE Processing Pipeline a6fb144af17e1bf26776ea364011337f https://www.encodeproject.org/files/ENCFF638IIC/@@download/ENCFF638IIC.bed.gz GRCh38 released low read depth missing control alignments ENCFF337PJJ bigBed narrowPeak peaks ENCSR298JCG ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOR1-human ENCAB805KAO DNA False 2016-11-17 ENCODE 1 ENCFF473CGS 13304849 ENCODE Processing Pipeline e6b431e665218b002fe74cf5f74864f9 https://www.encodeproject.org/files/ENCFF337PJJ/@@download/ENCFF337PJJ.bigBed GRCh38 released low read depth missing control alignments ENCFF318HHD bigBed narrowPeak peaks ENCSR298JCG ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOR1-human ENCAB805KAO DNA False 2016-11-17 ENCODE 1, 2 ENCFF266OPP 13104244 ENCODE Processing Pipeline 448466d8a45b72cf68a6d51d43f1a10f https://www.encodeproject.org/files/ENCFF318HHD/@@download/ENCFF318HHD.bigBed GRCh38 released low read depth missing control alignments ENCFF473CGS bed narrowPeak peaks ENCSR298JCG ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOR1-human ENCAB805KAO DNA False 2016-11-17 ENCODE 1 ENCFF488BQX 6592061 ENCODE Processing Pipeline f804384992c365c23482ac454e0e66fa https://www.encodeproject.org/files/ENCFF473CGS/@@download/ENCFF473CGS.bed.gz GRCh38 released low read depth missing control alignments ENCFF962DPU bigBed narrowPeak conservative idr thresholded peaks ENCSR298JCG ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOR1-human ENCAB805KAO DNA False 2016-11-17 ENCODE 1, 2 ENCFF757UDB 270272 ENCODE Processing Pipeline 61143c3784aa8cdbce9ecc9578d7b6fe https://www.encodeproject.org/files/ENCFF962DPU/@@download/ENCFF962DPU.bigBed GRCh38 released low read depth missing control alignments ENCFF108SHW bigBed narrowPeak optimal idr thresholded peaks ENCSR298JCG ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOR1-human ENCAB805KAO DNA False 2016-11-17 ENCODE 1, 2 ENCFF638IIC 413503 ENCODE Processing Pipeline 2a3606b5f40accbde35634e415fe52b1 https://www.encodeproject.org/files/ENCFF108SHW/@@download/ENCFF108SHW.bigBed GRCh38 released low read depth missing control alignments ENCFF266OPP bed narrowPeak peaks ENCSR298JCG ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOR1-human ENCAB805KAO DNA False 2016-11-17 ENCODE 1, 2 ENCFF247FGI, ENCFF488BQX 7192496 ENCODE Processing Pipeline cf628c0d321ea29f9d3957e57740d46b https://www.encodeproject.org/files/ENCFF266OPP/@@download/ENCFF266OPP.bed.gz GRCh38 released low read depth missing control alignments ENCFF682SNI bigBed narrowPeak peaks ENCSR298JCG ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOR1-human ENCAB805KAO DNA False 2016-11-17 ENCODE 2 ENCFF829KOI 13254858 ENCODE Processing Pipeline 7fec12e04d8bc172a94f9e0d95e640c0 https://www.encodeproject.org/files/ENCFF682SNI/@@download/ENCFF682SNI.bigBed GRCh38 released low read depth missing control alignments ENCFF757UDB bed narrowPeak conservative idr thresholded peaks ENCSR298JCG ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOR1-human ENCAB805KAO DNA False 2016-11-17 ENCODE 1, 2 ENCFF266OPP, ENCFF419RSJ, ENCFF473CGS, ENCFF829KOI 117072 ENCODE Processing Pipeline d25836a0a038ff0426c857de4a6ee295 https://www.encodeproject.org/files/ENCFF757UDB/@@download/ENCFF757UDB.bed.gz GRCh38 released low read depth missing control alignments ENCFF847TRJ bigWig signal p-value ENCSR298JCG ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOR1-human ENCAB805KAO DNA False 2016-11-17 ENCODE 1 ENCFF252BMK, ENCFF581ZJL 1067444688 ENCODE Processing Pipeline 22ae80de735cb349f3481661b28edb70 https://www.encodeproject.org/files/ENCFF847TRJ/@@download/ENCFF847TRJ.bigWig hg19 released low read depth missing control alignments ENCFF399ARI bigWig signal p-value ENCSR298JCG ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOR1-human ENCAB805KAO DNA False 2016-11-17 ENCODE 2 ENCFF051LWI, ENCFF491SHN 1073765920 ENCODE Processing Pipeline d87b30ae336eb02acdbd4c3e6e9ece7f https://www.encodeproject.org/files/ENCFF399ARI/@@download/ENCFF399ARI.bigWig hg19 released low read depth missing control alignments ENCFF965NLF bigWig signal p-value ENCSR298JCG ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOR1-human ENCAB805KAO DNA False 2016-11-17 ENCODE 1, 2 ENCFF051LWI, ENCFF252BMK, ENCFF491SHN, ENCFF581ZJL 1813863762 ENCODE Processing Pipeline a6ccf0c7630bd4f22f9870add539fcac https://www.encodeproject.org/files/ENCFF965NLF/@@download/ENCFF965NLF.bigWig hg19 released low read depth missing control alignments ENCFF783POZ bigWig fold change over control ENCSR298JCG ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOR1-human ENCAB805KAO DNA False 2016-11-17 ENCODE 1 ENCFF252BMK, ENCFF581ZJL 1107040024 ENCODE Processing Pipeline fdfdd507f047ab2b660eebdeac56d126 https://www.encodeproject.org/files/ENCFF783POZ/@@download/ENCFF783POZ.bigWig hg19 released low read depth missing control alignments ENCFF246VAY bigWig fold change over control ENCSR298JCG ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOR1-human ENCAB805KAO DNA False 2016-11-17 ENCODE 2 ENCFF051LWI, ENCFF491SHN 1057456750 ENCODE Processing Pipeline 41b6d07a4450d1126ffbc303d50c1577 https://www.encodeproject.org/files/ENCFF246VAY/@@download/ENCFF246VAY.bigWig hg19 released low read depth missing control alignments ENCFF415WNK bigWig fold change over control ENCSR298JCG ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOR1-human ENCAB805KAO DNA False 2016-11-17 ENCODE 1, 2 ENCFF051LWI, ENCFF252BMK, ENCFF491SHN, ENCFF581ZJL 1988011028 ENCODE Processing Pipeline 61244aabba744af1de7a7906f5da16a2 https://www.encodeproject.org/files/ENCFF415WNK/@@download/ENCFF415WNK.bigWig hg19 released low read depth missing control alignments ENCFF053IVE bed narrowPeak peaks ENCSR298JCG ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOR1-human ENCAB805KAO DNA False 2016-11-17 ENCODE 2 ENCFF051LWI, ENCFF491SHN 6543669 ENCODE Processing Pipeline 90dfef52ac8083f3669e86d458fcf7e5 https://www.encodeproject.org/files/ENCFF053IVE/@@download/ENCFF053IVE.bed.gz hg19 released low read depth missing control alignments ENCFF380AQD bed narrowPeak peaks ENCSR298JCG ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOR1-human ENCAB805KAO DNA False 2016-11-17 ENCODE 1 ENCFF252BMK, ENCFF581ZJL 6596604 ENCODE Processing Pipeline adb8150c7c79973e22d5a89c5e5f8249 https://www.encodeproject.org/files/ENCFF380AQD/@@download/ENCFF380AQD.bed.gz hg19 released low read depth missing control alignments ENCFF782XQB bigBed narrowPeak peaks ENCSR298JCG ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOR1-human ENCAB805KAO DNA False 2016-11-17 ENCODE 1 ENCFF380AQD 13298115 ENCODE Processing Pipeline 48cfeeed71b559c80a3626577a72cde1 https://www.encodeproject.org/files/ENCFF782XQB/@@download/ENCFF782XQB.bigBed hg19 released low read depth missing control alignments ENCFF269ZNE bed narrowPeak peaks ENCSR298JCG ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOR1-human ENCAB805KAO DNA False 2016-11-17 ENCODE 1, 2 ENCFF051LWI, ENCFF252BMK, ENCFF491SHN, ENCFF581ZJL 7193815 ENCODE Processing Pipeline d541d28f5f064a3aecb26d090dfc28c0 https://www.encodeproject.org/files/ENCFF269ZNE/@@download/ENCFF269ZNE.bed.gz hg19 released low read depth missing control alignments ENCFF367AAK bigBed narrowPeak peaks ENCSR298JCG ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOR1-human ENCAB805KAO DNA False 2016-11-17 ENCODE 1, 2 ENCFF269ZNE 13098428 ENCODE Processing Pipeline b7d5e9e0fb30ae949ac4124134313390 https://www.encodeproject.org/files/ENCFF367AAK/@@download/ENCFF367AAK.bigBed hg19 released low read depth missing control alignments ENCFF360LZW bigBed narrowPeak peaks ENCSR298JCG ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOR1-human ENCAB805KAO DNA False 2016-11-17 ENCODE 2 ENCFF053IVE 13231477 ENCODE Processing Pipeline 6ec36c50178bdd021ff7d826a9b1ca5b https://www.encodeproject.org/files/ENCFF360LZW/@@download/ENCFF360LZW.bigBed hg19 released low read depth missing control alignments ENCFF062BMU bed narrowPeak conservative idr thresholded peaks ENCSR298JCG ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOR1-human ENCAB805KAO DNA False 2016-11-17 ENCODE 1, 2 ENCFF001TDO, ENCFF053IVE, ENCFF269ZNE, ENCFF380AQD 116065 ENCODE Processing Pipeline e692cab543695a6b11a1d2614b6a169e https://www.encodeproject.org/files/ENCFF062BMU/@@download/ENCFF062BMU.bed.gz hg19 released low read depth missing control alignments ENCFF738JZB bigBed narrowPeak conservative idr thresholded peaks ENCSR298JCG ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOR1-human ENCAB805KAO DNA False 2016-11-17 ENCODE 1, 2 ENCFF062BMU 267017 ENCODE Processing Pipeline 76a0121aba830cb1a4329a2b62572300 https://www.encodeproject.org/files/ENCFF738JZB/@@download/ENCFF738JZB.bigBed hg19 released low read depth missing control alignments ENCFF456OAH bigBed narrowPeak optimal idr thresholded peaks ENCSR298JCG ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOR1-human ENCAB805KAO DNA False 2016-11-17 ENCODE 1, 2 ENCFF080NBZ 406011 ENCODE Processing Pipeline f0fd60d3f4bac81ce324b683d0364169 https://www.encodeproject.org/files/ENCFF456OAH/@@download/ENCFF456OAH.bigBed hg19 released low read depth missing control alignments ENCFF080NBZ bed narrowPeak optimal idr thresholded peaks ENCSR298JCG ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOR1-human ENCAB805KAO DNA False 2016-11-17 ENCODE 1, 2 ENCFF001TDO, ENCFF053IVE, ENCFF269ZNE, ENCFF380AQD 166325 ENCODE Processing Pipeline e76d0ae33614c1e309ad3b9500285627 https://www.encodeproject.org/files/ENCFF080NBZ/@@download/ENCFF080NBZ.bed.gz hg19 released low read depth missing control alignments ENCFF894OFW bam unfiltered alignments ENCSR149ZBI ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF584-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 50 ENCFF807MUK, ENCFF856FXU, ENCFF947GWY 1244555494 ENCODE Processing Pipeline a1d698a1bcd72d68e76da96004cb6add https://www.encodeproject.org/files/ENCFF894OFW/@@download/ENCFF894OFW.bam hg19 released low read depth, mild to moderate bottlenecking, missing genetic modification characterization missing control alignments ENCFF388PNJ bam unfiltered alignments ENCSR149ZBI ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF584-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 50 ENCFF159GUZ, ENCFF771AEO, ENCFF807MUK 1060410771 ENCODE Processing Pipeline b87aa3cf2849492d1e5b556769882484 https://www.encodeproject.org/files/ENCFF388PNJ/@@download/ENCFF388PNJ.bam hg19 released low read depth, mild to moderate bottlenecking, missing genetic modification characterization missing control alignments ENCFF159GUZ fastq reads ENCSR149ZBI ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF584-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 1 50 single-ended 499826897 Kevin White, UChicago 9278b3095bc21415dda6e1373c21062c SRA:SRR6212841 https://www.encodeproject.org/files/ENCFF159GUZ/@@download/ENCFF159GUZ.fastq.gz Illumina HiSeq 2000 /files/ENCFF212LBE/, /files/ENCFF861SAD/ released low read depth, mild to moderate bottlenecking, missing genetic modification characterization missing control alignments ENCFF856FXU fastq reads ENCSR149ZBI ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF584-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 1 50 single-ended 589483835 Kevin White, UChicago c6f9f13abc353036e10dbf3871098667 SRA:SRR6212839 https://www.encodeproject.org/files/ENCFF856FXU/@@download/ENCFF856FXU.fastq.gz Illumina HiSeq 2000 /files/ENCFF212LBE/, /files/ENCFF861SAD/ released low read depth, mild to moderate bottlenecking, missing genetic modification characterization missing control alignments ENCFF771AEO fastq reads ENCSR149ZBI ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF584-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 1 50 single-ended 486859969 Kevin White, UChicago 83e42d49fc36afa5f465725ecc809c94 SRA:SRR6212842 https://www.encodeproject.org/files/ENCFF771AEO/@@download/ENCFF771AEO.fastq.gz Illumina HiSeq 2500 /files/ENCFF212LBE/, /files/ENCFF861SAD/ released low read depth, mild to moderate bottlenecking, missing genetic modification characterization missing control alignments ENCFF947GWY fastq reads ENCSR149ZBI ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF584-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 1 50 single-ended 636438794 Kevin White, UChicago 3d6ff2c8f5850b706c802e9d47579adb SRA:SRR6212840 https://www.encodeproject.org/files/ENCFF947GWY/@@download/ENCFF947GWY.fastq.gz Illumina HiSeq 2500 /files/ENCFF212LBE/, /files/ENCFF861SAD/ released low read depth, mild to moderate bottlenecking, missing genetic modification characterization missing control alignments ENCFF749SPN bam alignments ENCSR149ZBI ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF584-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 50 ENCFF807MUK, ENCFF856FXU, ENCFF947GWY 804252816 ENCODE Processing Pipeline 41c70bda1536739111f62225c9900724 https://www.encodeproject.org/files/ENCFF749SPN/@@download/ENCFF749SPN.bam hg19 released low read depth, mild to moderate bottlenecking, missing genetic modification characterization missing control alignments ENCFF151KAU bam alignments ENCSR149ZBI ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF584-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 50 ENCFF159GUZ, ENCFF771AEO, ENCFF807MUK 791866884 ENCODE Processing Pipeline d22030050e9c50091d2002e0ca1018a0 https://www.encodeproject.org/files/ENCFF151KAU/@@download/ENCFF151KAU.bam hg19 released low read depth, mild to moderate bottlenecking, missing genetic modification characterization missing control alignments ENCFF749OPL bigWig signal p-value ENCSR149ZBI ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF584-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF122RZR, ENCFF151KAU 437654511 ENCODE Processing Pipeline 4582cd5241cb316bedd6925c2c125b79 https://www.encodeproject.org/files/ENCFF749OPL/@@download/ENCFF749OPL.bigWig hg19 released low read depth, mild to moderate bottlenecking, missing genetic modification characterization missing control alignments ENCFF736DHY bigWig signal p-value ENCSR149ZBI ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF584-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF122RZR, ENCFF749SPN 437505417 ENCODE Processing Pipeline 31a8349806f500fd37a041ddd0003e5b https://www.encodeproject.org/files/ENCFF736DHY/@@download/ENCFF736DHY.bigWig hg19 released low read depth, mild to moderate bottlenecking, missing genetic modification characterization missing control alignments ENCFF355QZP bigWig signal p-value ENCSR149ZBI ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF584-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF122RZR, ENCFF151KAU, ENCFF749SPN 608425171 ENCODE Processing Pipeline 7b09592df396cf71e3bf377aa327be5b https://www.encodeproject.org/files/ENCFF355QZP/@@download/ENCFF355QZP.bigWig hg19 released low read depth, mild to moderate bottlenecking, missing genetic modification characterization missing control alignments ENCFF082AJK bigWig fold change over control ENCSR149ZBI ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF584-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF122RZR, ENCFF151KAU 409046623 ENCODE Processing Pipeline c2715b1e5d757560bbbfb0f8d1aa15c6 https://www.encodeproject.org/files/ENCFF082AJK/@@download/ENCFF082AJK.bigWig hg19 released low read depth, mild to moderate bottlenecking, missing genetic modification characterization missing control alignments ENCFF819OJE bigWig fold change over control ENCSR149ZBI ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF584-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF122RZR, ENCFF151KAU, ENCFF749SPN 698819592 ENCODE Processing Pipeline 51694d1ed87581ca4192830601c66b06 https://www.encodeproject.org/files/ENCFF819OJE/@@download/ENCFF819OJE.bigWig hg19 released low read depth, mild to moderate bottlenecking, missing genetic modification characterization missing control alignments ENCFF568DPR bigWig fold change over control ENCSR149ZBI ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF584-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF122RZR, ENCFF749SPN 454804452 ENCODE Processing Pipeline 63e6dd2ce9630b92bbfedb6b7c05c342 https://www.encodeproject.org/files/ENCFF568DPR/@@download/ENCFF568DPR.bigWig hg19 released low read depth, mild to moderate bottlenecking, missing genetic modification characterization missing control alignments ENCFF496DRF bed narrowPeak peaks ENCSR149ZBI ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF584-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF122RZR, ENCFF749SPN 6600546 ENCODE Processing Pipeline e10b945072947412a4967a04e7cda307 https://www.encodeproject.org/files/ENCFF496DRF/@@download/ENCFF496DRF.bed.gz hg19 released low read depth, mild to moderate bottlenecking, missing genetic modification characterization missing control alignments ENCFF586UNH bed narrowPeak peaks ENCSR149ZBI ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF584-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF122RZR, ENCFF151KAU, ENCFF749SPN 7054018 ENCODE Processing Pipeline 9aa1c3c23f60d389f728bb3134d3104c https://www.encodeproject.org/files/ENCFF586UNH/@@download/ENCFF586UNH.bed.gz hg19 released low read depth, mild to moderate bottlenecking, missing genetic modification characterization missing control alignments ENCFF870WRO bed narrowPeak peaks ENCSR149ZBI ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF584-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF122RZR, ENCFF151KAU 6411041 ENCODE Processing Pipeline 7468371d858620d613dcb242d0996952 https://www.encodeproject.org/files/ENCFF870WRO/@@download/ENCFF870WRO.bed.gz hg19 released low read depth, mild to moderate bottlenecking, missing genetic modification characterization missing control alignments ENCFF982KCZ bigBed narrowPeak peaks ENCSR149ZBI ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF584-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF870WRO 12876478 ENCODE Processing Pipeline 25fedd76cd7db40904d85645ca0f940e https://www.encodeproject.org/files/ENCFF982KCZ/@@download/ENCFF982KCZ.bigBed hg19 released low read depth, mild to moderate bottlenecking, missing genetic modification characterization missing control alignments ENCFF192KRK bigBed narrowPeak peaks ENCSR149ZBI ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF584-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF496DRF 12683237 ENCODE Processing Pipeline ef0945c2d0bc540fa2191a2ae7903cec https://www.encodeproject.org/files/ENCFF192KRK/@@download/ENCFF192KRK.bigBed hg19 released low read depth, mild to moderate bottlenecking, missing genetic modification characterization missing control alignments ENCFF936FWG bigBed narrowPeak peaks ENCSR149ZBI ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF584-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF586UNH 12776229 ENCODE Processing Pipeline afcb94c9de85427edf6ac9b62f1b42f6 https://www.encodeproject.org/files/ENCFF936FWG/@@download/ENCFF936FWG.bigBed hg19 released low read depth, mild to moderate bottlenecking, missing genetic modification characterization missing control alignments ENCFF389BNK bam unfiltered alignments ENCSR149ZBI ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF584-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 50 ENCFF643CGH, ENCFF856FXU, ENCFF947GWY 1248192445 ENCODE Processing Pipeline 45ed83695862de4b38184cfe15fc180c https://www.encodeproject.org/files/ENCFF389BNK/@@download/ENCFF389BNK.bam GRCh38 released low read depth, mild to moderate bottlenecking, missing genetic modification characterization missing control alignments ENCFF130LPZ bam unfiltered alignments ENCSR149ZBI ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF584-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 50 ENCFF159GUZ, ENCFF643CGH, ENCFF771AEO 1063779857 ENCODE Processing Pipeline 1e8ecdfd6b311d62095484e7b3144486 https://www.encodeproject.org/files/ENCFF130LPZ/@@download/ENCFF130LPZ.bam GRCh38 released low read depth, mild to moderate bottlenecking, missing genetic modification characterization missing control alignments ENCFF057CNY bam alignments ENCSR149ZBI ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF584-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 50 ENCFF159GUZ, ENCFF643CGH, ENCFF771AEO 791325096 ENCODE Processing Pipeline ba4d6e065931aba1f857dffbc6f58ddb https://www.encodeproject.org/files/ENCFF057CNY/@@download/ENCFF057CNY.bam GRCh38 released low read depth, mild to moderate bottlenecking, missing genetic modification characterization missing control alignments ENCFF216TEN bam alignments ENCSR149ZBI ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF584-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 50 ENCFF643CGH, ENCFF856FXU, ENCFF947GWY 803771068 ENCODE Processing Pipeline 6c2431435307a02b5d5d77d649829866 https://www.encodeproject.org/files/ENCFF216TEN/@@download/ENCFF216TEN.bam GRCh38 released low read depth, mild to moderate bottlenecking, missing genetic modification characterization missing control alignments ENCFF986ATH bigWig signal p-value ENCSR149ZBI ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF584-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF057CNY, ENCFF216TEN 602529147 ENCODE Processing Pipeline 637df3251ed4150b42f185e9f274825a https://www.encodeproject.org/files/ENCFF986ATH/@@download/ENCFF986ATH.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, missing genetic modification characterization missing control alignments ENCFF677KBX bigWig signal p-value ENCSR149ZBI ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF584-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF057CNY 451029545 ENCODE Processing Pipeline 27204d625c74b4098260a8a7c1e65931 https://www.encodeproject.org/files/ENCFF677KBX/@@download/ENCFF677KBX.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, missing genetic modification characterization missing control alignments ENCFF727RFJ bigWig signal p-value ENCSR149ZBI ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF584-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF216TEN 497142669 ENCODE Processing Pipeline 933d75897ad5d27e364c13cccb0bba32 https://www.encodeproject.org/files/ENCFF727RFJ/@@download/ENCFF727RFJ.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, missing genetic modification characterization missing control alignments ENCFF579NFE bigWig fold change over control ENCSR149ZBI ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF584-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF216TEN 465758527 ENCODE Processing Pipeline 409bec0e4f066a747a2b9d6d00f90cb7 https://www.encodeproject.org/files/ENCFF579NFE/@@download/ENCFF579NFE.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, missing genetic modification characterization missing control alignments ENCFF088VYJ bigWig fold change over control ENCSR149ZBI ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF584-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF057CNY 419852907 ENCODE Processing Pipeline 47e7f85bbd02b473c734fb36535ee8ac https://www.encodeproject.org/files/ENCFF088VYJ/@@download/ENCFF088VYJ.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, missing genetic modification characterization missing control alignments ENCFF262GOA bed narrowPeak peaks ENCSR149ZBI ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF584-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF057CNY, ENCFF216TEN 6928691 ENCODE Processing Pipeline 882ca87ae01575f85d685afdf35e6a56 https://www.encodeproject.org/files/ENCFF262GOA/@@download/ENCFF262GOA.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, missing genetic modification characterization missing control alignments ENCFF057THX bigWig fold change over control ENCSR149ZBI ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF584-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF057CNY, ENCFF216TEN 691623450 ENCODE Processing Pipeline 48a4f3b117f50ee0494618326f01c19a https://www.encodeproject.org/files/ENCFF057THX/@@download/ENCFF057THX.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, missing genetic modification characterization missing control alignments ENCFF259KSQ bed narrowPeak peaks ENCSR149ZBI ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF584-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF057CNY 6209799 ENCODE Processing Pipeline d607734184b9949a6bb9a0fe2fc6af5a https://www.encodeproject.org/files/ENCFF259KSQ/@@download/ENCFF259KSQ.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, missing genetic modification characterization missing control alignments ENCFF560KXO bigBed narrowPeak peaks ENCSR149ZBI ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF584-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF259KSQ 12894279 ENCODE Processing Pipeline 63a88dd63ef5eecab7ce28f2ac1e3a87 https://www.encodeproject.org/files/ENCFF560KXO/@@download/ENCFF560KXO.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, missing genetic modification characterization missing control alignments ENCFF010PGN bigBed narrowPeak peaks ENCSR149ZBI ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF584-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF262GOA 12788211 ENCODE Processing Pipeline e6dba50395e6959367442e0d9def1284 https://www.encodeproject.org/files/ENCFF010PGN/@@download/ENCFF010PGN.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, missing genetic modification characterization missing control alignments ENCFF546FHG bed narrowPeak peaks ENCSR149ZBI ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF584-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF216TEN 6457109 ENCODE Processing Pipeline 393ce6395ed413092a919bd580df2309 https://www.encodeproject.org/files/ENCFF546FHG/@@download/ENCFF546FHG.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, missing genetic modification characterization missing control alignments ENCFF939MRU bigBed narrowPeak optimal idr thresholded peaks ENCSR149ZBI ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF584-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF544HIJ 639923 ENCODE Processing Pipeline 7f27a2fd47b2f7ce225ce0b5e0b4271e https://www.encodeproject.org/files/ENCFF939MRU/@@download/ENCFF939MRU.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, missing genetic modification characterization missing control alignments ENCFF867LYH bigBed narrowPeak peaks ENCSR149ZBI ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF584-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF546FHG 12677347 ENCODE Processing Pipeline 9b51f8f1552dc7cb44c345042cc13739 https://www.encodeproject.org/files/ENCFF867LYH/@@download/ENCFF867LYH.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, missing genetic modification characterization missing control alignments ENCFF757ULW bed narrowPeak conservative idr thresholded peaks ENCSR149ZBI ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF584-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF259KSQ, ENCFF262GOA, ENCFF419RSJ, ENCFF546FHG 270644 ENCODE Processing Pipeline 3dd73563254d747956a32a24202c15a9 https://www.encodeproject.org/files/ENCFF757ULW/@@download/ENCFF757ULW.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, missing genetic modification characterization missing control alignments ENCFF564DHT bigBed narrowPeak conservative idr thresholded peaks ENCSR149ZBI ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF584-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF757ULW 735514 ENCODE Processing Pipeline 6b5905757c46660fd9f185e51188053e https://www.encodeproject.org/files/ENCFF564DHT/@@download/ENCFF564DHT.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, missing genetic modification characterization missing control alignments ENCFF544HIJ bed narrowPeak optimal idr thresholded peaks ENCSR149ZBI ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF584-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF259KSQ, ENCFF262GOA, ENCFF419RSJ, ENCFF546FHG 275769 ENCODE Processing Pipeline a03a4b47186bd0794eef7366c45cf94e https://www.encodeproject.org/files/ENCFF544HIJ/@@download/ENCFF544HIJ.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, missing genetic modification characterization missing control alignments ENCFF498DWU bed narrowPeak conservative idr thresholded peaks ENCSR149ZBI ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF584-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF001TDO, ENCFF496DRF, ENCFF586UNH, ENCFF870WRO 220043 ENCODE Processing Pipeline 597a43b6282361a313cf2dac044aed32 https://www.encodeproject.org/files/ENCFF498DWU/@@download/ENCFF498DWU.bed.gz hg19 released low read depth, mild to moderate bottlenecking, missing genetic modification characterization missing control alignments ENCFF815TTY bed narrowPeak optimal idr thresholded peaks ENCSR149ZBI ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF584-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF001TDO, ENCFF496DRF, ENCFF586UNH, ENCFF870WRO 231991 ENCODE Processing Pipeline 8eb29d69d43dda0167d9a6380166fde5 https://www.encodeproject.org/files/ENCFF815TTY/@@download/ENCFF815TTY.bed.gz hg19 released low read depth, mild to moderate bottlenecking, missing genetic modification characterization missing control alignments ENCFF627KHW bigBed narrowPeak optimal idr thresholded peaks ENCSR149ZBI ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF584-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF815TTY 478770 ENCODE Processing Pipeline 4369147fc8b7c23010ce651a93031886 https://www.encodeproject.org/files/ENCFF627KHW/@@download/ENCFF627KHW.bigBed hg19 released low read depth, mild to moderate bottlenecking, missing genetic modification characterization missing control alignments ENCFF592KWA bigBed narrowPeak conservative idr thresholded peaks ENCSR149ZBI ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF584-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF498DWU 462154 ENCODE Processing Pipeline 1ced3178ea7308bed552dc6a7e8e3f78 https://www.encodeproject.org/files/ENCFF592KWA/@@download/ENCFF592KWA.bigBed hg19 released low read depth, mild to moderate bottlenecking, missing genetic modification characterization missing control alignments ENCFF648RRL bed narrowPeak peaks ENCSR286PCG ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBED1-human ENCAB000AAK DNA see document see document False 2014-07-07 ENCODE 2 ENCFF023YMB, ENCFF578ISP, ENCFF986OUP 6467947 ENCODE Processing Pipeline 4435ee4a7fe139f08413b2140a3f41ff https://www.encodeproject.org/files/ENCFF648RRL/@@download/ENCFF648RRL.bed.gz hg19 released ENCFF590SHC bigBed narrowPeak peaks ENCSR286PCG ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBED1-human ENCAB000AAK DNA see document see document False 2014-07-07 ENCODE 1 ENCFF052CCG 13373127 ENCODE Processing Pipeline 47692ae8a8c2621155082881a0763410 https://www.encodeproject.org/files/ENCFF590SHC/@@download/ENCFF590SHC.bigBed hg19 released ENCFF373FBG bed narrowPeak conservative idr thresholded peaks ENCSR286PCG ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBED1-human ENCAB000AAK DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF001TDO, ENCFF052CCG, ENCFF259MRC, ENCFF648RRL 93386 ENCODE Processing Pipeline f156f095b30ddbc2c0683a2c0ba94dab https://www.encodeproject.org/files/ENCFF373FBG/@@download/ENCFF373FBG.bed.gz hg19 released ENCFF921WZB bigBed narrowPeak optimal idr thresholded peaks ENCSR286PCG ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBED1-human ENCAB000AAK DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF253FON 241966 ENCODE Processing Pipeline 0175b779f0e04fd38d120c28b2141c6b https://www.encodeproject.org/files/ENCFF921WZB/@@download/ENCFF921WZB.bigBed hg19 released ENCFF287QTL bigWig signal p-value ENCSR286PCG ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBED1-human ENCAB000AAK DNA see document see document False 2014-07-07 ENCODE 2 ENCFF023YMB, ENCFF578ISP, ENCFF986OUP 1101273582 ENCODE Processing Pipeline 4b3e475b9626129f0a3d764716224a84 https://www.encodeproject.org/files/ENCFF287QTL/@@download/ENCFF287QTL.bigWig hg19 released ENCFF052CCG bed narrowPeak peaks ENCSR286PCG ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBED1-human ENCAB000AAK DNA see document see document False 2014-07-07 ENCODE 1 ENCFF016MFU, ENCFF023YMB, ENCFF578ISP 6399337 ENCODE Processing Pipeline ea0184726994327edd2dadc7190bb8fe https://www.encodeproject.org/files/ENCFF052CCG/@@download/ENCFF052CCG.bed.gz hg19 released ENCFF259MRC bed narrowPeak peaks ENCSR286PCG ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBED1-human ENCAB000AAK DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF016MFU, ENCFF023YMB, ENCFF578ISP, ENCFF986OUP 7007314 ENCODE Processing Pipeline 5951ae5c8afd1cd3a1d840f766badeea https://www.encodeproject.org/files/ENCFF259MRC/@@download/ENCFF259MRC.bed.gz hg19 released ENCFF476IRG bigBed narrowPeak conservative idr thresholded peaks ENCSR286PCG ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBED1-human ENCAB000AAK DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF373FBG 226477 ENCODE Processing Pipeline 8d87241b3e552dd5ba344496ce5451fe https://www.encodeproject.org/files/ENCFF476IRG/@@download/ENCFF476IRG.bigBed hg19 released ENCFF902DXX bigWig signal p-value ENCSR286PCG ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBED1-human ENCAB000AAK DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF016MFU, ENCFF023YMB, ENCFF578ISP, ENCFF986OUP 1213866888 ENCODE Processing Pipeline 2b538d984e676c2bd89353c47925eb1a https://www.encodeproject.org/files/ENCFF902DXX/@@download/ENCFF902DXX.bigWig hg19 released ENCFF263ERN bigBed narrowPeak peaks ENCSR286PCG ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBED1-human ENCAB000AAK DNA see document see document False 2014-07-07 ENCODE 2 ENCFF648RRL 13248062 ENCODE Processing Pipeline 0e3a3c1358ead38d52b9a45c4d17a9f1 https://www.encodeproject.org/files/ENCFF263ERN/@@download/ENCFF263ERN.bigBed hg19 released ENCFF430QXM bigBed narrowPeak peaks ENCSR286PCG ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBED1-human ENCAB000AAK DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF259MRC 13195074 ENCODE Processing Pipeline 6fb51601c3725689277a06df85209d76 https://www.encodeproject.org/files/ENCFF430QXM/@@download/ENCFF430QXM.bigBed hg19 released ENCFF496XVO bigWig fold change over control ENCSR286PCG ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBED1-human ENCAB000AAK DNA see document see document False 2014-07-07 ENCODE 2 ENCFF023YMB, ENCFF578ISP, ENCFF986OUP 780646225 ENCODE Processing Pipeline 11e0808a769fac069629bbb5eac46edf https://www.encodeproject.org/files/ENCFF496XVO/@@download/ENCFF496XVO.bigWig hg19 released ENCFF876HAD bigWig fold change over control ENCSR286PCG ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBED1-human ENCAB000AAK DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF016MFU, ENCFF023YMB, ENCFF578ISP, ENCFF986OUP 1225909219 ENCODE Processing Pipeline 97db925a5f1d8de460e044bbe4b3f646 https://www.encodeproject.org/files/ENCFF876HAD/@@download/ENCFF876HAD.bigWig hg19 released ENCFF253FON bed narrowPeak optimal idr thresholded peaks ENCSR286PCG ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBED1-human ENCAB000AAK DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF001TDO, ENCFF052CCG, ENCFF259MRC, ENCFF648RRL 104275 ENCODE Processing Pipeline 5fdeef786b8622e06a21d2c820b3da97 https://www.encodeproject.org/files/ENCFF253FON/@@download/ENCFF253FON.bed.gz hg19 released ENCFF979YNL bam unfiltered alignments ENCSR286PCG ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBED1-human ENCAB000AAK DNA see document see document False 2014-07-07 ENCODE 1 50 ENCFF002BFO, ENCFF807MUK 1723058051 ENCODE Processing Pipeline 3755c2fa3654203195815237d5a0702d https://www.encodeproject.org/files/ENCFF979YNL/@@download/ENCFF979YNL.bam hg19 released ENCFF410CMA bam unfiltered alignments ENCSR286PCG ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBED1-human ENCAB000AAK DNA see document see document False 2014-07-07 ENCODE 2 50 ENCFF002BFP, ENCFF807MUK 1748190476 ENCODE Processing Pipeline c6d98987bf17e0d30e3cd995c104e8e4 https://www.encodeproject.org/files/ENCFF410CMA/@@download/ENCFF410CMA.bam hg19 released ENCFF002BFO fastq reads ENCSR286PCG ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBED1-human ENCAB000AAK DNA see document see document False 2014-07-07 ENCODE 1 1 50 single-ended 1613808460 Richard Myers, HAIB 52bbe02cf59ba37f4d97ec59ec6d58bf SRA:SRR5331577 https://www.encodeproject.org/files/ENCFF002BFO/@@download/ENCFF002BFO.fastq.gz Illumina HiSeq 2000 /files/ENCFF001RVP/ released ENCFF002BFP fastq reads ENCSR286PCG ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBED1-human ENCAB000AAK DNA see document see document False 2014-07-07 ENCODE 2 1 50 single-ended 1629342273 Richard Myers, HAIB 76074bb4e8e631a86aa320611017543d SRA:SRR5331578 https://www.encodeproject.org/files/ENCFF002BFP/@@download/ENCFF002BFP.fastq.gz Illumina HiSeq 2000 /files/ENCFF002BGC/ released ENCFF016MFU bam alignments ENCSR286PCG ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBED1-human ENCAB000AAK DNA see document see document False 2014-07-07 ENCODE 1 50 ENCFF002BFO, ENCFF807MUK 1268017381 ENCODE Processing Pipeline 660cb5eac8d2c75e65d927c458ba0ab6 https://www.encodeproject.org/files/ENCFF016MFU/@@download/ENCFF016MFU.bam hg19 released ENCFF986OUP bam alignments ENCSR286PCG ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBED1-human ENCAB000AAK DNA see document see document False 2014-07-07 ENCODE 2 50 ENCFF002BFP, ENCFF807MUK 1305616018 ENCODE Processing Pipeline 92955810e04dad791b7c0fb7631648e3 https://www.encodeproject.org/files/ENCFF986OUP/@@download/ENCFF986OUP.bam hg19 released ENCFF836CBV bigWig signal p-value ENCSR286PCG ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBED1-human ENCAB000AAK DNA see document see document False 2014-07-07 ENCODE 1 ENCFF016MFU, ENCFF023YMB, ENCFF578ISP 1040416198 ENCODE Processing Pipeline fb4bcafa73e4ec67965091504d90e316 https://www.encodeproject.org/files/ENCFF836CBV/@@download/ENCFF836CBV.bigWig hg19 released ENCFF387DEW bigWig fold change over control ENCSR286PCG ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBED1-human ENCAB000AAK DNA see document see document False 2014-07-07 ENCODE 1 ENCFF016MFU, ENCFF023YMB, ENCFF578ISP 769867199 ENCODE Processing Pipeline 5cdc7e3563bcac5eb505b741c79d3139 https://www.encodeproject.org/files/ENCFF387DEW/@@download/ENCFF387DEW.bigWig hg19 released ENCFF061DUL bam unfiltered alignments ENCSR286PCG ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBED1-human ENCAB000AAK DNA see document see document False 2014-07-07 ENCODE 1 50 ENCFF002BFO, ENCFF643CGH 1726607237 ENCODE Processing Pipeline 39f59ac46bed67b46af25e848b3a76c9 https://www.encodeproject.org/files/ENCFF061DUL/@@download/ENCFF061DUL.bam GRCh38 released ENCFF061RFH bam unfiltered alignments ENCSR286PCG ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBED1-human ENCAB000AAK DNA see document see document False 2014-07-07 ENCODE 2 50 ENCFF002BFP, ENCFF643CGH 1751658712 ENCODE Processing Pipeline 1035f4c32400b508cd611623af65beba https://www.encodeproject.org/files/ENCFF061RFH/@@download/ENCFF061RFH.bam GRCh38 released ENCFF261BXO bam alignments ENCSR286PCG ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBED1-human ENCAB000AAK DNA see document see document False 2014-07-07 ENCODE 2 50 ENCFF002BFP, ENCFF643CGH 1305095200 ENCODE Processing Pipeline 38f96996071f609605ab06b63c7a2a0f https://www.encodeproject.org/files/ENCFF261BXO/@@download/ENCFF261BXO.bam GRCh38 released ENCFF035GBL bam alignments ENCSR286PCG ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBED1-human ENCAB000AAK DNA see document see document False 2014-07-07 ENCODE 1 50 ENCFF002BFO, ENCFF643CGH 1267455228 ENCODE Processing Pipeline d20b8c035213987c7e77d9322e2f5b7a https://www.encodeproject.org/files/ENCFF035GBL/@@download/ENCFF035GBL.bam GRCh38 released ENCFF377BCO bigWig signal p-value ENCSR286PCG ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBED1-human ENCAB000AAK DNA see document see document False 2014-07-07 ENCODE 1 ENCFF035GBL, ENCFF121DUE, ENCFF709XAA 1048400099 ENCODE Processing Pipeline efcefbe47563f8212dac4f358426f0b7 https://www.encodeproject.org/files/ENCFF377BCO/@@download/ENCFF377BCO.bigWig GRCh38 released ENCFF669JAP bigWig signal p-value ENCSR286PCG ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBED1-human ENCAB000AAK DNA see document see document False 2014-07-07 ENCODE 2 ENCFF121DUE, ENCFF261BXO, ENCFF709XAA 1106697203 ENCODE Processing Pipeline 6bf07c236f29d6eb7a23f270800fada1 https://www.encodeproject.org/files/ENCFF669JAP/@@download/ENCFF669JAP.bigWig GRCh38 released ENCFF465PNK bigWig signal p-value ENCSR286PCG ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBED1-human ENCAB000AAK DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF035GBL, ENCFF121DUE, ENCFF261BXO, ENCFF709XAA 1305950391 ENCODE Processing Pipeline 8457ed47cc1e865b028b1bc33b7c0f1c https://www.encodeproject.org/files/ENCFF465PNK/@@download/ENCFF465PNK.bigWig GRCh38 released ENCFF128OSD bigWig fold change over control ENCSR286PCG ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBED1-human ENCAB000AAK DNA see document see document False 2014-07-07 ENCODE 1 ENCFF035GBL, ENCFF121DUE, ENCFF709XAA 784667665 ENCODE Processing Pipeline 63ad885b429bbea56fe522ddf1331a89 https://www.encodeproject.org/files/ENCFF128OSD/@@download/ENCFF128OSD.bigWig GRCh38 released ENCFF010XWS bigWig fold change over control ENCSR286PCG ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBED1-human ENCAB000AAK DNA see document see document False 2014-07-07 ENCODE 2 ENCFF121DUE, ENCFF261BXO, ENCFF709XAA 825643500 ENCODE Processing Pipeline 9b160de48409c7da4e221bf1ef260004 https://www.encodeproject.org/files/ENCFF010XWS/@@download/ENCFF010XWS.bigWig GRCh38 released ENCFF891OWF bigWig fold change over control ENCSR286PCG ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBED1-human ENCAB000AAK DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF035GBL, ENCFF121DUE, ENCFF261BXO, ENCFF709XAA 1220605707 ENCODE Processing Pipeline b2fff7fbcaaf4beaafb4fdbe8c3c54fa https://www.encodeproject.org/files/ENCFF891OWF/@@download/ENCFF891OWF.bigWig GRCh38 released ENCFF371IMA bed narrowPeak peaks ENCSR286PCG ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBED1-human ENCAB000AAK DNA see document see document False 2014-07-07 ENCODE 1 ENCFF035GBL, ENCFF121DUE, ENCFF709XAA 6372209 ENCODE Processing Pipeline 9731b9cdb0623a4de180b26b61ca4dc5 https://www.encodeproject.org/files/ENCFF371IMA/@@download/ENCFF371IMA.bed.gz GRCh38 released ENCFF938QIC bed narrowPeak peaks ENCSR286PCG ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBED1-human ENCAB000AAK DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF035GBL, ENCFF121DUE, ENCFF261BXO, ENCFF709XAA 6955462 ENCODE Processing Pipeline 34ff6da1005d65084f0a0455fe945330 https://www.encodeproject.org/files/ENCFF938QIC/@@download/ENCFF938QIC.bed.gz GRCh38 released ENCFF135BUM bigBed narrowPeak peaks ENCSR286PCG ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBED1-human ENCAB000AAK DNA see document see document False 2014-07-07 ENCODE 2 ENCFF086AMQ 13271949 ENCODE Processing Pipeline 19e5f8d20c7aa5ed8b08f936170f4fb1 https://www.encodeproject.org/files/ENCFF135BUM/@@download/ENCFF135BUM.bigBed GRCh38 released ENCFF086AMQ bed narrowPeak peaks ENCSR286PCG ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBED1-human ENCAB000AAK DNA see document see document False 2014-07-07 ENCODE 2 ENCFF121DUE, ENCFF261BXO, ENCFF709XAA 6468341 ENCODE Processing Pipeline 1d51a115dc7d2efa52004b7ef1f29901 https://www.encodeproject.org/files/ENCFF086AMQ/@@download/ENCFF086AMQ.bed.gz GRCh38 released ENCFF619KWZ bed narrowPeak conservative idr thresholded peaks ENCSR286PCG ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBED1-human ENCAB000AAK DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF086AMQ, ENCFF371IMA, ENCFF419RSJ, ENCFF938QIC 93920 ENCODE Processing Pipeline 80c2419a8c439902fab5ff013c93e6c8 https://www.encodeproject.org/files/ENCFF619KWZ/@@download/ENCFF619KWZ.bed.gz GRCh38 released ENCFF634VKB bigBed narrowPeak conservative idr thresholded peaks ENCSR286PCG ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBED1-human ENCAB000AAK DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF619KWZ 229536 ENCODE Processing Pipeline aaa33d4267c4d46a3b5e1d6955bad0c6 https://www.encodeproject.org/files/ENCFF634VKB/@@download/ENCFF634VKB.bigBed GRCh38 released ENCFF500KOA bigBed narrowPeak optimal idr thresholded peaks ENCSR286PCG ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBED1-human ENCAB000AAK DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF388TYU 250265 ENCODE Processing Pipeline d9d226da9d2b8a15c0d08f46274b7646 https://www.encodeproject.org/files/ENCFF500KOA/@@download/ENCFF500KOA.bigBed GRCh38 released ENCFF486VYD bigBed narrowPeak peaks ENCSR286PCG ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBED1-human ENCAB000AAK DNA see document see document False 2014-07-07 ENCODE 1 ENCFF371IMA 13395172 ENCODE Processing Pipeline d67d2396afaaa9daf6e84ff63ad8bec0 https://www.encodeproject.org/files/ENCFF486VYD/@@download/ENCFF486VYD.bigBed GRCh38 released ENCFF488EMC bigBed narrowPeak peaks ENCSR286PCG ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBED1-human ENCAB000AAK DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF938QIC 13228534 ENCODE Processing Pipeline 3e460b032580c347f7cdc603865a5016 https://www.encodeproject.org/files/ENCFF488EMC/@@download/ENCFF488EMC.bigBed GRCh38 released ENCFF388TYU bed narrowPeak optimal idr thresholded peaks ENCSR286PCG ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBED1-human ENCAB000AAK DNA see document see document False 2014-07-07 ENCODE 1, 2 ENCFF086AMQ, ENCFF371IMA, ENCFF419RSJ, ENCFF938QIC 108938 ENCODE Processing Pipeline 97f1ac53cbf7b2049fdc18567c700d9c https://www.encodeproject.org/files/ENCFF388TYU/@@download/ENCFF388TYU.bed.gz GRCh38 released ENCFF796NRL bam unfiltered alignments ENCSR031TFS ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB336UOP DNA False 2016-09-27 ENCODE 1 100 ENCFF272EEG, ENCFF531FHF, ENCFF807MUK 4481531680 ENCODE Processing Pipeline 2e8f5ebc37ae99a7b74a524b6d3464e5 https://www.encodeproject.org/files/ENCFF796NRL/@@download/ENCFF796NRL.bam hg19 released low read depth, mild to moderate bottlenecking ENCFF459VLR bam unfiltered alignments ENCSR031TFS ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB336UOP DNA False 2016-09-27 ENCODE 2 100 ENCFF545PSD, ENCFF807MUK, ENCFF959SCN 4266332372 ENCODE Processing Pipeline dcea9e77f4649bbacd28fee175e15b16 https://www.encodeproject.org/files/ENCFF459VLR/@@download/ENCFF459VLR.bam hg19 released low read depth, mild to moderate bottlenecking ENCFF959SCN fastq reads ENCSR031TFS ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB336UOP DNA False 2016-09-27 ENCODE 2 1 100 paired-ended 1 ENCFF545PSD 2000153143 Michael Snyder, Stanford 263940f5ae60c73dc0d1eb12156dce2d SRA:SRR5112449 https://www.encodeproject.org/files/ENCFF959SCN/@@download/ENCFF959SCN.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFD/ released low read depth, mild to moderate bottlenecking ENCFF272EEG fastq reads ENCSR031TFS ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB336UOP DNA False 2016-09-27 ENCODE 1 1 100 paired-ended 1 ENCFF531FHF 2061187507 Michael Snyder, Stanford 605fb868e1d04b1a9405842c53e1d70f SRA:SRR5112448 https://www.encodeproject.org/files/ENCFF272EEG/@@download/ENCFF272EEG.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFF/ released low read depth, mild to moderate bottlenecking ENCFF531FHF fastq reads ENCSR031TFS ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB336UOP DNA False 2016-09-27 ENCODE 1 1 100 paired-ended 2 ENCFF272EEG 2098882941 Michael Snyder, Stanford 637135e153a100bdcf06c3492c6fd4d5 SRA:SRR5112448 https://www.encodeproject.org/files/ENCFF531FHF/@@download/ENCFF531FHF.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFH/ released low read depth, mild to moderate bottlenecking ENCFF545PSD fastq reads ENCSR031TFS ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB336UOP DNA False 2016-09-27 ENCODE 2 1 100 paired-ended 2 ENCFF959SCN 2038708114 Michael Snyder, Stanford 3dcbe878c24e3b1b5bcf6789874fc9b4 SRA:SRR5112449 https://www.encodeproject.org/files/ENCFF545PSD/@@download/ENCFF545PSD.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFA/ released low read depth, mild to moderate bottlenecking ENCFF666QOX bam alignments ENCSR031TFS ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB336UOP DNA False 2016-09-27 ENCODE 2 100 ENCFF545PSD, ENCFF807MUK, ENCFF959SCN 3298498544 ENCODE Processing Pipeline 587537b365f05be20a0773f085dd44d2 https://www.encodeproject.org/files/ENCFF666QOX/@@download/ENCFF666QOX.bam hg19 released low read depth, mild to moderate bottlenecking ENCFF845QLW bam alignments ENCSR031TFS ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB336UOP DNA False 2016-09-27 ENCODE 1 100 ENCFF272EEG, ENCFF531FHF, ENCFF807MUK 3614444905 ENCODE Processing Pipeline 1ab784b4a39eb8f071e113055d544323 https://www.encodeproject.org/files/ENCFF845QLW/@@download/ENCFF845QLW.bam hg19 released low read depth, mild to moderate bottlenecking ENCFF657KLA bigWig signal p-value ENCSR031TFS ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB336UOP DNA False 2016-09-27 ENCODE 1 ENCFF581ZJL, ENCFF845QLW 1047847605 ENCODE Processing Pipeline f5be7150e087ac88ee995b2129128e57 https://www.encodeproject.org/files/ENCFF657KLA/@@download/ENCFF657KLA.bigWig hg19 released low read depth, mild to moderate bottlenecking ENCFF730ROC bigWig signal p-value ENCSR031TFS ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB336UOP DNA False 2016-09-27 ENCODE 2 ENCFF051LWI, ENCFF666QOX 1071034550 ENCODE Processing Pipeline b9f7d603b8deeef6174cf5bb2c128ff0 https://www.encodeproject.org/files/ENCFF730ROC/@@download/ENCFF730ROC.bigWig hg19 released low read depth, mild to moderate bottlenecking ENCFF042PRZ bigWig fold change over control ENCSR031TFS ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB336UOP DNA False 2016-09-27 ENCODE 1 ENCFF581ZJL, ENCFF845QLW 1114246671 ENCODE Processing Pipeline 0122cad924216a5816f474aef048a40f https://www.encodeproject.org/files/ENCFF042PRZ/@@download/ENCFF042PRZ.bigWig hg19 released low read depth, mild to moderate bottlenecking ENCFF612BZJ bed narrowPeak peaks ENCSR031TFS ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB336UOP DNA False 2016-09-27 ENCODE 1 ENCFF581ZJL, ENCFF845QLW 6936134 ENCODE Processing Pipeline d72f450110faad9e7f9859b35d269540 https://www.encodeproject.org/files/ENCFF612BZJ/@@download/ENCFF612BZJ.bed.gz hg19 released low read depth, mild to moderate bottlenecking ENCFF541PYW bigWig signal p-value ENCSR031TFS ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB336UOP DNA False 2016-09-27 ENCODE 1, 2 ENCFF051LWI, ENCFF581ZJL, ENCFF666QOX, ENCFF845QLW 1894193513 ENCODE Processing Pipeline f7cf635ec51b1c1208110d02b99f1669 https://www.encodeproject.org/files/ENCFF541PYW/@@download/ENCFF541PYW.bigWig hg19 released low read depth, mild to moderate bottlenecking ENCFF345HKX bigWig fold change over control ENCSR031TFS ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB336UOP DNA False 2016-09-27 ENCODE 2 ENCFF051LWI, ENCFF666QOX 990090389 ENCODE Processing Pipeline 0917ac0b7830313b88b4309a01054644 https://www.encodeproject.org/files/ENCFF345HKX/@@download/ENCFF345HKX.bigWig hg19 released low read depth, mild to moderate bottlenecking ENCFF348UKA bigWig fold change over control ENCSR031TFS ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB336UOP DNA False 2016-09-27 ENCODE 1, 2 ENCFF051LWI, ENCFF581ZJL, ENCFF666QOX, ENCFF845QLW 1946562886 ENCODE Processing Pipeline 2d810012db8e947a2b94cc3970c040fd https://www.encodeproject.org/files/ENCFF348UKA/@@download/ENCFF348UKA.bigWig hg19 released low read depth, mild to moderate bottlenecking ENCFF670NDN bed narrowPeak peaks ENCSR031TFS ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB336UOP DNA False 2016-09-27 ENCODE 2 ENCFF051LWI, ENCFF666QOX 7008065 ENCODE Processing Pipeline fb61bad4afd6e625fe1b841d2b318320 https://www.encodeproject.org/files/ENCFF670NDN/@@download/ENCFF670NDN.bed.gz hg19 released low read depth, mild to moderate bottlenecking ENCFF845UBO bed narrowPeak conservative idr thresholded peaks ENCSR031TFS ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB336UOP DNA False 2016-09-27 ENCODE 1, 2 ENCFF001TDO, ENCFF612BZJ, ENCFF670NDN, ENCFF763UDO 450573 ENCODE Processing Pipeline b50abfe1e7a4c0e6033f60d10886aea4 https://www.encodeproject.org/files/ENCFF845UBO/@@download/ENCFF845UBO.bed.gz hg19 released low read depth, mild to moderate bottlenecking ENCFF772LCO bigBed narrowPeak peaks ENCSR031TFS ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB336UOP DNA False 2016-09-27 ENCODE 1, 2 ENCFF763UDO 12738828 ENCODE Processing Pipeline 70f6dc3048454b40506fdcc93c20113d https://www.encodeproject.org/files/ENCFF772LCO/@@download/ENCFF772LCO.bigBed hg19 released low read depth, mild to moderate bottlenecking ENCFF937VZI bed narrowPeak optimal idr thresholded peaks ENCSR031TFS ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB336UOP DNA False 2016-09-27 ENCODE 1, 2 ENCFF001TDO, ENCFF612BZJ, ENCFF670NDN, ENCFF763UDO 484306 ENCODE Processing Pipeline 42f2932c2c3ab72016c12df15687dfd1 https://www.encodeproject.org/files/ENCFF937VZI/@@download/ENCFF937VZI.bed.gz hg19 released low read depth, mild to moderate bottlenecking ENCFF763UDO bed narrowPeak peaks ENCSR031TFS ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB336UOP DNA False 2016-09-27 ENCODE 1, 2 ENCFF051LWI, ENCFF581ZJL, ENCFF666QOX, ENCFF845QLW 7275287 ENCODE Processing Pipeline 559de1fbe59b62a1e14173f0fb447d3a https://www.encodeproject.org/files/ENCFF763UDO/@@download/ENCFF763UDO.bed.gz hg19 released low read depth, mild to moderate bottlenecking ENCFF029UMQ bigBed narrowPeak peaks ENCSR031TFS ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB336UOP DNA False 2016-09-27 ENCODE 1 ENCFF612BZJ 13134488 ENCODE Processing Pipeline b8dcc965e5aeb8e4ac41f658acba9ccc https://www.encodeproject.org/files/ENCFF029UMQ/@@download/ENCFF029UMQ.bigBed hg19 released low read depth, mild to moderate bottlenecking ENCFF067PYG bigBed narrowPeak peaks ENCSR031TFS ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB336UOP DNA False 2016-09-27 ENCODE 2 ENCFF670NDN 12979603 ENCODE Processing Pipeline 3d721650e1f0ac87416c5c1ad0823dc4 https://www.encodeproject.org/files/ENCFF067PYG/@@download/ENCFF067PYG.bigBed hg19 released low read depth, mild to moderate bottlenecking ENCFF742EGO bigBed narrowPeak conservative idr thresholded peaks ENCSR031TFS ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB336UOP DNA False 2016-09-27 ENCODE 1, 2 ENCFF845UBO 1257442 ENCODE Processing Pipeline ff2bffd9ea3661acddb0212ae3b2e2ca https://www.encodeproject.org/files/ENCFF742EGO/@@download/ENCFF742EGO.bigBed hg19 released low read depth, mild to moderate bottlenecking ENCFF721SIB bigBed narrowPeak optimal idr thresholded peaks ENCSR031TFS ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB336UOP DNA False 2016-09-27 ENCODE 1, 2 ENCFF937VZI 1114826 ENCODE Processing Pipeline f3afcf11f068b05afea9416042878e4c https://www.encodeproject.org/files/ENCFF721SIB/@@download/ENCFF721SIB.bigBed hg19 released low read depth, mild to moderate bottlenecking ENCFF806AHN bam unfiltered alignments ENCSR031TFS ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB336UOP DNA False 2016-09-27 ENCODE 2 100 ENCFF545PSD, ENCFF643CGH, ENCFF959SCN 4266712610 ENCODE Processing Pipeline ec4d1da9732400b08a3edef5eb0c8f4b https://www.encodeproject.org/files/ENCFF806AHN/@@download/ENCFF806AHN.bam GRCh38 released low read depth, mild to moderate bottlenecking ENCFF331RLM bam unfiltered alignments ENCSR031TFS ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB336UOP DNA False 2016-09-27 ENCODE 1 100 ENCFF272EEG, ENCFF531FHF, ENCFF643CGH 4484445754 ENCODE Processing Pipeline 8ea4108866030df604a73f298b2a781d https://www.encodeproject.org/files/ENCFF331RLM/@@download/ENCFF331RLM.bam GRCh38 released low read depth, mild to moderate bottlenecking ENCFF559BJS bam alignments ENCSR031TFS ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB336UOP DNA False 2016-09-27 ENCODE 2 100 ENCFF545PSD, ENCFF643CGH, ENCFF959SCN 3302132368 ENCODE Processing Pipeline 0b28363d94f9b99bcb857b7d993d6229 https://www.encodeproject.org/files/ENCFF559BJS/@@download/ENCFF559BJS.bam GRCh38 released low read depth, mild to moderate bottlenecking ENCFF725WJS bam alignments ENCSR031TFS ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB336UOP DNA False 2016-09-27 ENCODE 1 100 ENCFF272EEG, ENCFF531FHF, ENCFF643CGH 3618037374 ENCODE Processing Pipeline 1664a10ba60945c7f81ba008468ec82b https://www.encodeproject.org/files/ENCFF725WJS/@@download/ENCFF725WJS.bam GRCh38 released low read depth, mild to moderate bottlenecking ENCFF125SRD bigWig signal p-value ENCSR031TFS ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB336UOP DNA False 2016-09-27 ENCODE 1 ENCFF725WJS, ENCFF910IKB 1154361726 ENCODE Processing Pipeline 895b56de0a1406e9c894cc26b0665734 https://www.encodeproject.org/files/ENCFF125SRD/@@download/ENCFF125SRD.bigWig GRCh38 released low read depth, mild to moderate bottlenecking ENCFF277NDO bigWig signal p-value ENCSR031TFS ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB336UOP DNA False 2016-09-27 ENCODE 2 ENCFF227IZS, ENCFF559BJS 871111299 ENCODE Processing Pipeline e7fe3986e65bbe7661a8ef65c13c4372 https://www.encodeproject.org/files/ENCFF277NDO/@@download/ENCFF277NDO.bigWig GRCh38 released low read depth, mild to moderate bottlenecking ENCFF399YWD bigWig signal p-value ENCSR031TFS ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB336UOP DNA False 2016-09-27 ENCODE 1, 2 ENCFF227IZS, ENCFF559BJS, ENCFF725WJS, ENCFF910IKB 1906544548 ENCODE Processing Pipeline 17c93cefffbe046e51c5210f7ee4418d https://www.encodeproject.org/files/ENCFF399YWD/@@download/ENCFF399YWD.bigWig GRCh38 released low read depth, mild to moderate bottlenecking ENCFF959IQT bigWig fold change over control ENCSR031TFS ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB336UOP DNA False 2016-09-27 ENCODE 1 ENCFF725WJS, ENCFF910IKB 1103539854 ENCODE Processing Pipeline 428b9a754ace81a0e1cd9bcc0b0bcc20 https://www.encodeproject.org/files/ENCFF959IQT/@@download/ENCFF959IQT.bigWig GRCh38 released low read depth, mild to moderate bottlenecking ENCFF575MUQ bigWig fold change over control ENCSR031TFS ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB336UOP DNA False 2016-09-27 ENCODE 2 ENCFF227IZS, ENCFF559BJS 994012941 ENCODE Processing Pipeline 21d805bf379226a22f0f628fcd26dd16 https://www.encodeproject.org/files/ENCFF575MUQ/@@download/ENCFF575MUQ.bigWig GRCh38 released low read depth, mild to moderate bottlenecking ENCFF311RLQ bigWig fold change over control ENCSR031TFS ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB336UOP DNA False 2016-09-27 ENCODE 1, 2 ENCFF227IZS, ENCFF559BJS, ENCFF725WJS, ENCFF910IKB 1943552692 ENCODE Processing Pipeline b87e4aa6ea5e71d8e8d71ce008b167e5 https://www.encodeproject.org/files/ENCFF311RLQ/@@download/ENCFF311RLQ.bigWig GRCh38 released low read depth, mild to moderate bottlenecking ENCFF859OSW bed narrowPeak peaks ENCSR031TFS ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB336UOP DNA False 2016-09-27 ENCODE 1 ENCFF725WJS, ENCFF910IKB 6826738 ENCODE Processing Pipeline 4d89c51618b3622ca92cdefb0e1924e9 https://www.encodeproject.org/files/ENCFF859OSW/@@download/ENCFF859OSW.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking ENCFF883AML bed narrowPeak peaks ENCSR031TFS ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB336UOP DNA False 2016-09-27 ENCODE 2 ENCFF227IZS, ENCFF559BJS 6876282 ENCODE Processing Pipeline 2cf32c5d73ae6995667389fcc3ac87c5 https://www.encodeproject.org/files/ENCFF883AML/@@download/ENCFF883AML.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking ENCFF676PAG bed narrowPeak peaks ENCSR031TFS ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB336UOP DNA False 2016-09-27 ENCODE 1, 2 ENCFF227IZS, ENCFF559BJS, ENCFF725WJS, ENCFF910IKB 7206574 ENCODE Processing Pipeline 2fad57a1780724f2da652eee6f8b7a15 https://www.encodeproject.org/files/ENCFF676PAG/@@download/ENCFF676PAG.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking ENCFF256PMF bigBed narrowPeak peaks ENCSR031TFS ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB336UOP DNA False 2016-09-27 ENCODE 1 ENCFF859OSW 13083012 ENCODE Processing Pipeline bc2be28689993a59d039bff2b169eb3d https://www.encodeproject.org/files/ENCFF256PMF/@@download/ENCFF256PMF.bigBed GRCh38 released low read depth, mild to moderate bottlenecking ENCFF629GGE bigBed narrowPeak peaks ENCSR031TFS ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB336UOP DNA False 2016-09-27 ENCODE 2 ENCFF883AML 12909874 ENCODE Processing Pipeline b07aef0faaef217eaf1f7032a3f78848 https://www.encodeproject.org/files/ENCFF629GGE/@@download/ENCFF629GGE.bigBed GRCh38 released low read depth, mild to moderate bottlenecking ENCFF613GYA bigBed narrowPeak peaks ENCSR031TFS ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB336UOP DNA False 2016-09-27 ENCODE 1, 2 ENCFF676PAG 12674402 ENCODE Processing Pipeline 47a7baded9735eafe96af277297f1aa3 https://www.encodeproject.org/files/ENCFF613GYA/@@download/ENCFF613GYA.bigBed GRCh38 released low read depth, mild to moderate bottlenecking ENCFF909KNE bed narrowPeak conservative idr thresholded peaks ENCSR031TFS ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB336UOP DNA False 2016-09-27 ENCODE 1, 2 ENCFF419RSJ, ENCFF676PAG, ENCFF859OSW, ENCFF883AML 430233 ENCODE Processing Pipeline 4c699a00b4ecc06deba87ba13230b7a3 https://www.encodeproject.org/files/ENCFF909KNE/@@download/ENCFF909KNE.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking ENCFF757FLN bigBed narrowPeak conservative idr thresholded peaks ENCSR031TFS ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB336UOP DNA False 2016-09-27 ENCODE 1, 2 ENCFF909KNE 1024002 ENCODE Processing Pipeline 3df4ea8d3d1b42965c75776aba9ec8c2 https://www.encodeproject.org/files/ENCFF757FLN/@@download/ENCFF757FLN.bigBed GRCh38 released low read depth, mild to moderate bottlenecking ENCFF881ONC bed narrowPeak optimal idr thresholded peaks ENCSR031TFS ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB336UOP DNA False 2016-09-27 ENCODE 1, 2 ENCFF419RSJ, ENCFF676PAG, ENCFF859OSW, ENCFF883AML 459016 ENCODE Processing Pipeline f8a5691141a23717efbeb8a04ca5463d https://www.encodeproject.org/files/ENCFF881ONC/@@download/ENCFF881ONC.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking ENCFF573RGR bigBed narrowPeak optimal idr thresholded peaks ENCSR031TFS ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB336UOP DNA False 2016-09-27 ENCODE 1, 2 ENCFF881ONC 1079051 ENCODE Processing Pipeline 5e537a9cdd81938b406571e04a9737e6 https://www.encodeproject.org/files/ENCFF573RGR/@@download/ENCFF573RGR.bigBed GRCh38 released low read depth, mild to moderate bottlenecking ENCFF046DDP bam unfiltered alignments ENCSR107RHZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens YBX1-human ENCAB493UWX DNA False 2016-07-28 ENCODE 2 100 ENCFF079PYC, ENCFF807MUK, ENCFF909OVD 5526618807 ENCODE Processing Pipeline 1148cf66dd614220662967bbe1e88593 https://www.encodeproject.org/files/ENCFF046DDP/@@download/ENCFF046DDP.bam hg19 released borderline replicate concordance, mild to moderate bottlenecking ENCFF883RKR bam unfiltered alignments ENCSR107RHZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens YBX1-human ENCAB493UWX DNA False 2016-07-28 ENCODE 1 100 ENCFF011GGX, ENCFF183DJQ, ENCFF807MUK 5573510305 ENCODE Processing Pipeline 1c7a08fbf53108426859bfd7c4ff72ea https://www.encodeproject.org/files/ENCFF883RKR/@@download/ENCFF883RKR.bam hg19 released borderline replicate concordance, mild to moderate bottlenecking ENCFF909OVD fastq reads ENCSR107RHZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens YBX1-human ENCAB493UWX DNA False 2016-07-28 ENCODE 2 1 100 paired-ended 1 ENCFF079PYC 2543253935 Michael Snyder, Stanford 412257c54199d89e332d384cb911e0a8 SRA:SRR5111123 https://www.encodeproject.org/files/ENCFF909OVD/@@download/ENCFF909OVD.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFD/ released borderline replicate concordance, mild to moderate bottlenecking ENCFF011GGX fastq reads ENCSR107RHZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens YBX1-human ENCAB493UWX DNA False 2016-07-28 ENCODE 1 1 100 paired-ended 1 ENCFF183DJQ 2520660357 Michael Snyder, Stanford 6a02a3f3e820fd6407ca37d296e8c8a6 SRA:SRR5111122 https://www.encodeproject.org/files/ENCFF011GGX/@@download/ENCFF011GGX.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFF/ released borderline replicate concordance, mild to moderate bottlenecking ENCFF183DJQ fastq reads ENCSR107RHZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens YBX1-human ENCAB493UWX DNA False 2016-07-28 ENCODE 1 1 100 paired-ended 2 ENCFF011GGX 2612408743 Michael Snyder, Stanford d2e908ab3ce3d493c2f398da39536e26 SRA:SRR5111122 https://www.encodeproject.org/files/ENCFF183DJQ/@@download/ENCFF183DJQ.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFH/ released borderline replicate concordance, mild to moderate bottlenecking ENCFF079PYC fastq reads ENCSR107RHZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens YBX1-human ENCAB493UWX DNA False 2016-07-28 ENCODE 2 1 100 paired-ended 2 ENCFF909OVD 2533688872 Michael Snyder, Stanford 3538e79850d2aee94540f949edd0ce1b SRA:SRR5111123 https://www.encodeproject.org/files/ENCFF079PYC/@@download/ENCFF079PYC.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFA/ released borderline replicate concordance, mild to moderate bottlenecking ENCFF509PRR bam alignments ENCSR107RHZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens YBX1-human ENCAB493UWX DNA False 2016-07-28 ENCODE 2 100 ENCFF079PYC, ENCFF807MUK, ENCFF909OVD 4416626145 ENCODE Processing Pipeline 8fcd8f57e65018389ec7781c3ba5352f https://www.encodeproject.org/files/ENCFF509PRR/@@download/ENCFF509PRR.bam hg19 released borderline replicate concordance, mild to moderate bottlenecking ENCFF869CLO bam alignments ENCSR107RHZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens YBX1-human ENCAB493UWX DNA False 2016-07-28 ENCODE 1 100 ENCFF011GGX, ENCFF183DJQ, ENCFF807MUK 3973663115 ENCODE Processing Pipeline fa6a7a7b680778a5f3db85004f1a3dd7 https://www.encodeproject.org/files/ENCFF869CLO/@@download/ENCFF869CLO.bam hg19 released borderline replicate concordance, mild to moderate bottlenecking ENCFF502QIV bam unfiltered alignments ENCSR107RHZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens YBX1-human ENCAB493UWX DNA False 2016-07-28 ENCODE 2 100 ENCFF079PYC, ENCFF643CGH, ENCFF909OVD 5531421925 ENCODE Processing Pipeline 80d6aab123ef0f2e4774971a7c916150 https://www.encodeproject.org/files/ENCFF502QIV/@@download/ENCFF502QIV.bam GRCh38 released borderline replicate concordance, mild to moderate bottlenecking ENCFF473THN bam unfiltered alignments ENCSR107RHZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens YBX1-human ENCAB493UWX DNA False 2016-07-28 ENCODE 1 100 ENCFF011GGX, ENCFF183DJQ, ENCFF643CGH 5578802386 ENCODE Processing Pipeline 0a5e9bc5f073831b9c47c44eba12c87f https://www.encodeproject.org/files/ENCFF473THN/@@download/ENCFF473THN.bam GRCh38 released borderline replicate concordance, mild to moderate bottlenecking ENCFF715AMR bam alignments ENCSR107RHZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens YBX1-human ENCAB493UWX DNA False 2016-07-28 ENCODE 2 100 ENCFF079PYC, ENCFF643CGH, ENCFF909OVD 4418469896 ENCODE Processing Pipeline d226963d8824dd3e7b882aeef0897043 https://www.encodeproject.org/files/ENCFF715AMR/@@download/ENCFF715AMR.bam GRCh38 released borderline replicate concordance, mild to moderate bottlenecking ENCFF195WOK bam alignments ENCSR107RHZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens YBX1-human ENCAB493UWX DNA False 2016-07-28 ENCODE 1 100 ENCFF011GGX, ENCFF183DJQ, ENCFF643CGH 3975801179 ENCODE Processing Pipeline c3a376d513f47ce6778faf9fa1487cf8 https://www.encodeproject.org/files/ENCFF195WOK/@@download/ENCFF195WOK.bam GRCh38 released borderline replicate concordance, mild to moderate bottlenecking ENCFF255BZW bigWig signal p-value ENCSR107RHZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens YBX1-human ENCAB493UWX DNA False 2016-07-28 ENCODE 1 ENCFF195WOK, ENCFF910IKB 1297557799 ENCODE Processing Pipeline 7490d44340b7503acd8d36b0f7a2e435 https://www.encodeproject.org/files/ENCFF255BZW/@@download/ENCFF255BZW.bigWig GRCh38 released borderline replicate concordance, mild to moderate bottlenecking ENCFF521AAB bigWig signal p-value ENCSR107RHZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens YBX1-human ENCAB493UWX DNA False 2016-07-28 ENCODE 2 ENCFF227IZS, ENCFF715AMR 1148408509 ENCODE Processing Pipeline 3b637559db7bc23e892996ade3092592 https://www.encodeproject.org/files/ENCFF521AAB/@@download/ENCFF521AAB.bigWig GRCh38 released borderline replicate concordance, mild to moderate bottlenecking ENCFF387BIY bigWig signal p-value ENCSR107RHZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens YBX1-human ENCAB493UWX DNA False 2016-07-28 ENCODE 1, 2 ENCFF195WOK, ENCFF227IZS, ENCFF715AMR, ENCFF910IKB 1910088925 ENCODE Processing Pipeline eacc14fefa1dfd2f4aa9dc6c33799771 https://www.encodeproject.org/files/ENCFF387BIY/@@download/ENCFF387BIY.bigWig GRCh38 released borderline replicate concordance, mild to moderate bottlenecking ENCFF855CIO bigWig fold change over control ENCSR107RHZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens YBX1-human ENCAB493UWX DNA False 2016-07-28 ENCODE 1 ENCFF195WOK, ENCFF910IKB 1125110925 ENCODE Processing Pipeline f91cd0d1801e03ffc51fa9cea10f1ecc https://www.encodeproject.org/files/ENCFF855CIO/@@download/ENCFF855CIO.bigWig GRCh38 released borderline replicate concordance, mild to moderate bottlenecking ENCFF157UGB bigWig fold change over control ENCSR107RHZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens YBX1-human ENCAB493UWX DNA False 2016-07-28 ENCODE 2 ENCFF227IZS, ENCFF715AMR 1105341401 ENCODE Processing Pipeline add4ae2160051b5616ec716c4edd17ed https://www.encodeproject.org/files/ENCFF157UGB/@@download/ENCFF157UGB.bigWig GRCh38 released borderline replicate concordance, mild to moderate bottlenecking ENCFF454AJP bigWig fold change over control ENCSR107RHZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens YBX1-human ENCAB493UWX DNA False 2016-07-28 ENCODE 1, 2 ENCFF195WOK, ENCFF227IZS, ENCFF715AMR, ENCFF910IKB 2086171602 ENCODE Processing Pipeline dc2cd58eb32b3677698782712447743b https://www.encodeproject.org/files/ENCFF454AJP/@@download/ENCFF454AJP.bigWig GRCh38 released borderline replicate concordance, mild to moderate bottlenecking ENCFF973DVW bed narrowPeak peaks ENCSR107RHZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens YBX1-human ENCAB493UWX DNA False 2016-07-28 ENCODE 2 ENCFF227IZS, ENCFF715AMR 5920237 ENCODE Processing Pipeline 54fb633d2eece5a1f6e510ccce8eafba https://www.encodeproject.org/files/ENCFF973DVW/@@download/ENCFF973DVW.bed.gz GRCh38 released borderline replicate concordance, mild to moderate bottlenecking ENCFF918CHH bed narrowPeak peaks ENCSR107RHZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens YBX1-human ENCAB493UWX DNA False 2016-07-28 ENCODE 1 ENCFF195WOK, ENCFF910IKB 5620574 ENCODE Processing Pipeline d7556b845affe37a5c42772f8c80c1bb https://www.encodeproject.org/files/ENCFF918CHH/@@download/ENCFF918CHH.bed.gz GRCh38 released borderline replicate concordance, mild to moderate bottlenecking ENCFF902FVT bed narrowPeak peaks ENCSR107RHZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens YBX1-human ENCAB493UWX DNA False 2016-07-28 ENCODE 1, 2 ENCFF195WOK, ENCFF227IZS, ENCFF715AMR, ENCFF910IKB 6892634 ENCODE Processing Pipeline 0d7cf528abea37e1f61ff21969efcf50 https://www.encodeproject.org/files/ENCFF902FVT/@@download/ENCFF902FVT.bed.gz GRCh38 released borderline replicate concordance, mild to moderate bottlenecking ENCFF625XBO bigBed narrowPeak peaks ENCSR107RHZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens YBX1-human ENCAB493UWX DNA False 2016-07-28 ENCODE 1 ENCFF918CHH 11336242 ENCODE Processing Pipeline 5b05ad9ea1029afe69c7b976238f2644 https://www.encodeproject.org/files/ENCFF625XBO/@@download/ENCFF625XBO.bigBed GRCh38 released borderline replicate concordance, mild to moderate bottlenecking ENCFF893RKN bigBed narrowPeak peaks ENCSR107RHZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens YBX1-human ENCAB493UWX DNA False 2016-07-28 ENCODE 2 ENCFF973DVW 11187435 ENCODE Processing Pipeline 98db079e3dbfa0786c454625de2498a4 https://www.encodeproject.org/files/ENCFF893RKN/@@download/ENCFF893RKN.bigBed GRCh38 released borderline replicate concordance, mild to moderate bottlenecking ENCFF487XNQ bigBed narrowPeak peaks ENCSR107RHZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens YBX1-human ENCAB493UWX DNA False 2016-07-28 ENCODE 1, 2 ENCFF902FVT 11187762 ENCODE Processing Pipeline afc2fcf9fbdcdb3969e00a3291fc1921 https://www.encodeproject.org/files/ENCFF487XNQ/@@download/ENCFF487XNQ.bigBed GRCh38 released borderline replicate concordance, mild to moderate bottlenecking ENCFF740JCX bed narrowPeak conservative idr thresholded peaks ENCSR107RHZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens YBX1-human ENCAB493UWX DNA False 2016-07-28 ENCODE 1, 2 ENCFF419RSJ, ENCFF902FVT, ENCFF918CHH, ENCFF973DVW 9514 ENCODE Processing Pipeline 14d7be275e791a1a1db454b1e27c4fc6 https://www.encodeproject.org/files/ENCFF740JCX/@@download/ENCFF740JCX.bed.gz GRCh38 released borderline replicate concordance, mild to moderate bottlenecking ENCFF520DIY bed narrowPeak optimal idr thresholded peaks ENCSR107RHZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens YBX1-human ENCAB493UWX DNA False 2016-07-28 ENCODE 1, 2 ENCFF419RSJ, ENCFF902FVT, ENCFF918CHH, ENCFF973DVW 25433 ENCODE Processing Pipeline 9fe8d8108be9a9a2a89fc11da7c04f03 https://www.encodeproject.org/files/ENCFF520DIY/@@download/ENCFF520DIY.bed.gz GRCh38 released borderline replicate concordance, mild to moderate bottlenecking ENCFF648NHE bigBed narrowPeak conservative idr thresholded peaks ENCSR107RHZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens YBX1-human ENCAB493UWX DNA False 2016-07-28 ENCODE 1, 2 ENCFF740JCX 69240 ENCODE Processing Pipeline d75e6ff5033edf6549fb7c870440c58d https://www.encodeproject.org/files/ENCFF648NHE/@@download/ENCFF648NHE.bigBed GRCh38 released borderline replicate concordance, mild to moderate bottlenecking ENCFF224UXR bigBed narrowPeak optimal idr thresholded peaks ENCSR107RHZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens YBX1-human ENCAB493UWX DNA False 2016-07-28 ENCODE 1, 2 ENCFF520DIY 96362 ENCODE Processing Pipeline 67b7abd1ef2020087840c0198479954a https://www.encodeproject.org/files/ENCFF224UXR/@@download/ENCFF224UXR.bigBed GRCh38 released borderline replicate concordance, mild to moderate bottlenecking ENCFF706LIT bed narrowPeak optimal idr thresholded peaks ENCSR107RHZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens YBX1-human ENCAB493UWX DNA False 2016-07-28 ENCODE 1, 2 ENCFF001TDO, ENCFF609DTK, ENCFF669CKL, ENCFF749VLH 26921 ENCODE Processing Pipeline 1fde054e4ffdaa0d943623283ebc001a https://www.encodeproject.org/files/ENCFF706LIT/@@download/ENCFF706LIT.bed.gz hg19 released borderline replicate concordance, mild to moderate bottlenecking ENCFF132NUJ bigWig fold change over control ENCSR107RHZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens YBX1-human ENCAB493UWX DNA False 2016-07-28 ENCODE 1 ENCFF581ZJL, ENCFF869CLO 1131565250 ENCODE Processing Pipeline 05c2054009b346f26d16a83a7052f510 https://www.encodeproject.org/files/ENCFF132NUJ/@@download/ENCFF132NUJ.bigWig hg19 released borderline replicate concordance, mild to moderate bottlenecking ENCFF306NXS bigWig fold change over control ENCSR107RHZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens YBX1-human ENCAB493UWX DNA False 2016-07-28 ENCODE 2 ENCFF051LWI, ENCFF509PRR 1115532069 ENCODE Processing Pipeline b268bb1fb726e2384904a431f56bf7cf https://www.encodeproject.org/files/ENCFF306NXS/@@download/ENCFF306NXS.bigWig hg19 released borderline replicate concordance, mild to moderate bottlenecking ENCFF424GQF bigWig fold change over control ENCSR107RHZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens YBX1-human ENCAB493UWX DNA False 2016-07-28 ENCODE 1, 2 ENCFF051LWI, ENCFF509PRR, ENCFF581ZJL, ENCFF869CLO 2102078623 ENCODE Processing Pipeline e88d498b49cf06c27fb15cc574a30f21 https://www.encodeproject.org/files/ENCFF424GQF/@@download/ENCFF424GQF.bigWig hg19 released borderline replicate concordance, mild to moderate bottlenecking ENCFF749VLH bed narrowPeak peaks ENCSR107RHZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens YBX1-human ENCAB493UWX DNA False 2016-07-28 ENCODE 1, 2 ENCFF051LWI, ENCFF509PRR, ENCFF581ZJL, ENCFF869CLO 6885687 ENCODE Processing Pipeline 3cdd62a71274791f962614d9d85b3c5c https://www.encodeproject.org/files/ENCFF749VLH/@@download/ENCFF749VLH.bed.gz hg19 released borderline replicate concordance, mild to moderate bottlenecking ENCFF681HIB bigBed narrowPeak peaks ENCSR107RHZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens YBX1-human ENCAB493UWX DNA False 2016-07-28 ENCODE 1 ENCFF609DTK 11319847 ENCODE Processing Pipeline 9bd97186c7f004a9a8c1b48fc879dbb5 https://www.encodeproject.org/files/ENCFF681HIB/@@download/ENCFF681HIB.bigBed hg19 released borderline replicate concordance, mild to moderate bottlenecking ENCFF015BVQ bigBed narrowPeak optimal idr thresholded peaks ENCSR107RHZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens YBX1-human ENCAB493UWX DNA False 2016-07-28 ENCODE 1, 2 ENCFF706LIT 97126 ENCODE Processing Pipeline b14749d9818a5ee4224325226e694608 https://www.encodeproject.org/files/ENCFF015BVQ/@@download/ENCFF015BVQ.bigBed hg19 released borderline replicate concordance, mild to moderate bottlenecking ENCFF886UVT bigWig signal p-value ENCSR107RHZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens YBX1-human ENCAB493UWX DNA False 2016-07-28 ENCODE 2 ENCFF051LWI, ENCFF509PRR 1016143075 ENCODE Processing Pipeline 594ad54c13341f08f97597848234d682 https://www.encodeproject.org/files/ENCFF886UVT/@@download/ENCFF886UVT.bigWig hg19 released borderline replicate concordance, mild to moderate bottlenecking ENCFF550TQH bigWig signal p-value ENCSR107RHZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens YBX1-human ENCAB493UWX DNA False 2016-07-28 ENCODE 1, 2 ENCFF051LWI, ENCFF509PRR, ENCFF581ZJL, ENCFF869CLO 2022587676 ENCODE Processing Pipeline bb98f4e39925e8ba3380db9b1d8a78be https://www.encodeproject.org/files/ENCFF550TQH/@@download/ENCFF550TQH.bigWig hg19 released borderline replicate concordance, mild to moderate bottlenecking ENCFF609DTK bed narrowPeak peaks ENCSR107RHZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens YBX1-human ENCAB493UWX DNA False 2016-07-28 ENCODE 1 ENCFF581ZJL, ENCFF869CLO 5620010 ENCODE Processing Pipeline 13acb9cf6ce2e69b859c7aabf99aaa7e https://www.encodeproject.org/files/ENCFF609DTK/@@download/ENCFF609DTK.bed.gz hg19 released borderline replicate concordance, mild to moderate bottlenecking ENCFF669CKL bed narrowPeak peaks ENCSR107RHZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens YBX1-human ENCAB493UWX DNA False 2016-07-28 ENCODE 2 ENCFF051LWI, ENCFF509PRR 5169710 ENCODE Processing Pipeline d898317747cf0dc762e0cc49c37d2566 https://www.encodeproject.org/files/ENCFF669CKL/@@download/ENCFF669CKL.bed.gz hg19 released borderline replicate concordance, mild to moderate bottlenecking ENCFF444SWI bigBed narrowPeak peaks ENCSR107RHZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens YBX1-human ENCAB493UWX DNA False 2016-07-28 ENCODE 2 ENCFF669CKL 10077715 ENCODE Processing Pipeline a9777f1f3ba98c65d8bd0229ba5ac706 https://www.encodeproject.org/files/ENCFF444SWI/@@download/ENCFF444SWI.bigBed hg19 released borderline replicate concordance, mild to moderate bottlenecking ENCFF470KXO bigBed narrowPeak peaks ENCSR107RHZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens YBX1-human ENCAB493UWX DNA False 2016-07-28 ENCODE 1, 2 ENCFF749VLH 11200146 ENCODE Processing Pipeline dff087a6a4710d1f365513dd8d310b8b https://www.encodeproject.org/files/ENCFF470KXO/@@download/ENCFF470KXO.bigBed hg19 released borderline replicate concordance, mild to moderate bottlenecking ENCFF449NTP bigWig signal p-value ENCSR107RHZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens YBX1-human ENCAB493UWX DNA False 2016-07-28 ENCODE 1 ENCFF581ZJL, ENCFF869CLO 1192591392 ENCODE Processing Pipeline 3c7a450b051a61495f73bef3f24dea88 https://www.encodeproject.org/files/ENCFF449NTP/@@download/ENCFF449NTP.bigWig hg19 released borderline replicate concordance, mild to moderate bottlenecking ENCFF876GPT bigBed narrowPeak conservative idr thresholded peaks ENCSR107RHZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens YBX1-human ENCAB493UWX DNA False 2016-07-28 ENCODE 1, 2 ENCFF452VYJ 68322 ENCODE Processing Pipeline b41c68fb9b4586ab4f6ca913fb27fbb3 https://www.encodeproject.org/files/ENCFF876GPT/@@download/ENCFF876GPT.bigBed hg19 released borderline replicate concordance, mild to moderate bottlenecking ENCFF452VYJ bed narrowPeak conservative idr thresholded peaks ENCSR107RHZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens YBX1-human ENCAB493UWX DNA False 2016-07-28 ENCODE 1, 2 ENCFF001TDO, ENCFF609DTK, ENCFF669CKL, ENCFF749VLH 9905 ENCODE Processing Pipeline 2050dce921d0d27c91ba8d0a271771a6 https://www.encodeproject.org/files/ENCFF452VYJ/@@download/ENCFF452VYJ.bed.gz hg19 released borderline replicate concordance, mild to moderate bottlenecking ENCFF257UIV fastq reads ENCSR130HEG ChIP-seq EFO:0002067 K562 cell line Homo sapiens COPS2-human ENCAB643QQV DNA False 2016-09-26 ENCODE 2 1 100 paired-ended 1 ENCFF042QKO 2783116579 Michael Snyder, Stanford 5fb2512e16a14d192f4521c9fc89abfe SRA:SRR5111150 https://www.encodeproject.org/files/ENCFF257UIV/@@download/ENCFF257UIV.fastq.gz Illumina HiSeq 4000 /files/ENCFF259GQA/ released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF610FSQ fastq reads ENCSR130HEG ChIP-seq EFO:0002067 K562 cell line Homo sapiens COPS2-human ENCAB643QQV DNA False 2016-09-26 ENCODE 1 1 100 paired-ended 1 ENCFF064WKY 3748445091 Michael Snyder, Stanford a86f16dc8b0ec413441488e5a0785913 SRA:SRR5111149 https://www.encodeproject.org/files/ENCFF610FSQ/@@download/ENCFF610FSQ.fastq.gz Illumina HiSeq 4000 /files/ENCFF498JMO/ released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF064WKY fastq reads ENCSR130HEG ChIP-seq EFO:0002067 K562 cell line Homo sapiens COPS2-human ENCAB643QQV DNA False 2016-09-26 ENCODE 1 1 100 paired-ended 2 ENCFF610FSQ 4023817874 Michael Snyder, Stanford aff85c32250fbc7c1faf5ec9b2ceca99 SRA:SRR5111149 https://www.encodeproject.org/files/ENCFF064WKY/@@download/ENCFF064WKY.fastq.gz Illumina HiSeq 4000 /files/ENCFF502GTS/ released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF042QKO fastq reads ENCSR130HEG ChIP-seq EFO:0002067 K562 cell line Homo sapiens COPS2-human ENCAB643QQV DNA False 2016-09-26 ENCODE 2 1 100 paired-ended 2 ENCFF257UIV 3071304539 Michael Snyder, Stanford bd9c6bd225a3841546bd0f07507a4c94 SRA:SRR5111150 https://www.encodeproject.org/files/ENCFF042QKO/@@download/ENCFF042QKO.fastq.gz Illumina HiSeq 4000 /files/ENCFF837MIV/ released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF741XHV bam unfiltered alignments ENCSR130HEG ChIP-seq EFO:0002067 K562 cell line Homo sapiens COPS2-human ENCAB643QQV DNA False 2016-09-26 ENCODE 2 100 ENCFF042QKO, ENCFF257UIV, ENCFF807MUK 5479563486 ENCODE Processing Pipeline 51a06f814480f6394bad0b2e447e3eea https://www.encodeproject.org/files/ENCFF741XHV/@@download/ENCFF741XHV.bam hg19 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF716BSA bam unfiltered alignments ENCSR130HEG ChIP-seq EFO:0002067 K562 cell line Homo sapiens COPS2-human ENCAB643QQV DNA False 2016-09-26 ENCODE 2 100 ENCFF042QKO, ENCFF257UIV, ENCFF643CGH 5485629062 ENCODE Processing Pipeline f2d473a6b85454d3dc77d25d7a7b006a https://www.encodeproject.org/files/ENCFF716BSA/@@download/ENCFF716BSA.bam GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF802BAF bam unfiltered alignments ENCSR130HEG ChIP-seq EFO:0002067 K562 cell line Homo sapiens COPS2-human ENCAB643QQV DNA False 2016-09-26 ENCODE 1 100 ENCFF064WKY, ENCFF610FSQ, ENCFF807MUK 7281613715 ENCODE Processing Pipeline 88566b177a5982b2a02c57eeb0faba6f https://www.encodeproject.org/files/ENCFF802BAF/@@download/ENCFF802BAF.bam hg19 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF747VXT bam unfiltered alignments ENCSR130HEG ChIP-seq EFO:0002067 K562 cell line Homo sapiens COPS2-human ENCAB643QQV DNA False 2016-09-26 ENCODE 1 100 ENCFF064WKY, ENCFF610FSQ, ENCFF643CGH 7291868278 ENCODE Processing Pipeline 63bb90c1fb2fbc411a203e6909fb5186 https://www.encodeproject.org/files/ENCFF747VXT/@@download/ENCFF747VXT.bam GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF494NSZ bam alignments ENCSR130HEG ChIP-seq EFO:0002067 K562 cell line Homo sapiens COPS2-human ENCAB643QQV DNA False 2016-09-26 ENCODE 2 100 ENCFF042QKO, ENCFF257UIV, ENCFF807MUK 3695624014 ENCODE Processing Pipeline e5c11b2d7a99d9623da722c267be017e https://www.encodeproject.org/files/ENCFF494NSZ/@@download/ENCFF494NSZ.bam hg19 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF423MBY bam alignments ENCSR130HEG ChIP-seq EFO:0002067 K562 cell line Homo sapiens COPS2-human ENCAB643QQV DNA False 2016-09-26 ENCODE 2 100 ENCFF042QKO, ENCFF257UIV, ENCFF643CGH 3700198891 ENCODE Processing Pipeline 059c7472b4cfa96ff045e62777b7c1d6 https://www.encodeproject.org/files/ENCFF423MBY/@@download/ENCFF423MBY.bam GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF327GHK bam alignments ENCSR130HEG ChIP-seq EFO:0002067 K562 cell line Homo sapiens COPS2-human ENCAB643QQV DNA False 2016-09-26 ENCODE 1 100 ENCFF064WKY, ENCFF610FSQ, ENCFF807MUK 5073997520 ENCODE Processing Pipeline 551b3c534f03acbb93affb004a04b0af https://www.encodeproject.org/files/ENCFF327GHK/@@download/ENCFF327GHK.bam hg19 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF307UCL bam alignments ENCSR130HEG ChIP-seq EFO:0002067 K562 cell line Homo sapiens COPS2-human ENCAB643QQV DNA False 2016-09-26 ENCODE 1 100 ENCFF064WKY, ENCFF610FSQ, ENCFF643CGH 5080046310 ENCODE Processing Pipeline 6c4e774a2df0f5c057afc232d8d421e6 https://www.encodeproject.org/files/ENCFF307UCL/@@download/ENCFF307UCL.bam GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF139BUY bigWig signal p-value ENCSR130HEG ChIP-seq EFO:0002067 K562 cell line Homo sapiens COPS2-human ENCAB643QQV DNA False 2016-09-26 ENCODE 2 ENCFF494NSZ, ENCFF834TUP 1310368850 ENCODE Processing Pipeline 7d314adeeb051f10df1309a3078efeed https://www.encodeproject.org/files/ENCFF139BUY/@@download/ENCFF139BUY.bigWig hg19 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF284QQW bigWig signal p-value ENCSR130HEG ChIP-seq EFO:0002067 K562 cell line Homo sapiens COPS2-human ENCAB643QQV DNA False 2016-09-26 ENCODE 1 ENCFF160VXC, ENCFF327GHK, ENCFF834TUP 1811011019 ENCODE Processing Pipeline 8048012b82c7d6f27a00eb0e8f254188 https://www.encodeproject.org/files/ENCFF284QQW/@@download/ENCFF284QQW.bigWig hg19 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF887ZLC bigWig signal p-value ENCSR130HEG ChIP-seq EFO:0002067 K562 cell line Homo sapiens COPS2-human ENCAB643QQV DNA False 2016-09-26 ENCODE 1, 2 ENCFF160VXC, ENCFF327GHK, ENCFF494NSZ, ENCFF834TUP 1976082108 ENCODE Processing Pipeline dc836784440b31a3914804e8823433a2 https://www.encodeproject.org/files/ENCFF887ZLC/@@download/ENCFF887ZLC.bigWig hg19 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF999PEA bigWig fold change over control ENCSR130HEG ChIP-seq EFO:0002067 K562 cell line Homo sapiens COPS2-human ENCAB643QQV DNA False 2016-09-26 ENCODE 1 ENCFF160VXC, ENCFF327GHK, ENCFF834TUP 2015707894 ENCODE Processing Pipeline 64cfbc3fccf8c5c018ec18b2045b0992 https://www.encodeproject.org/files/ENCFF999PEA/@@download/ENCFF999PEA.bigWig hg19 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF847HSI bigWig fold change over control ENCSR130HEG ChIP-seq EFO:0002067 K562 cell line Homo sapiens COPS2-human ENCAB643QQV DNA False 2016-09-26 ENCODE 2 ENCFF494NSZ, ENCFF834TUP 1326117153 ENCODE Processing Pipeline b0374a5272c69a49c63f3c684900ca72 https://www.encodeproject.org/files/ENCFF847HSI/@@download/ENCFF847HSI.bigWig hg19 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF684JZK bigWig fold change over control ENCSR130HEG ChIP-seq EFO:0002067 K562 cell line Homo sapiens COPS2-human ENCAB643QQV DNA False 2016-09-26 ENCODE 1, 2 ENCFF160VXC, ENCFF327GHK, ENCFF494NSZ, ENCFF834TUP 2439649766 ENCODE Processing Pipeline 1716b22a26713eb2d8d36aeae0c22de0 https://www.encodeproject.org/files/ENCFF684JZK/@@download/ENCFF684JZK.bigWig hg19 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF285LKH bed narrowPeak peaks ENCSR130HEG ChIP-seq EFO:0002067 K562 cell line Homo sapiens COPS2-human ENCAB643QQV DNA False 2016-09-26 ENCODE 1 ENCFF160VXC, ENCFF327GHK, ENCFF834TUP 6837520 ENCODE Processing Pipeline 79ea0c0bf9dea9f99781d0a485899deb https://www.encodeproject.org/files/ENCFF285LKH/@@download/ENCFF285LKH.bed.gz hg19 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF549VOY bed narrowPeak peaks ENCSR130HEG ChIP-seq EFO:0002067 K562 cell line Homo sapiens COPS2-human ENCAB643QQV DNA False 2016-09-26 ENCODE 2 ENCFF494NSZ, ENCFF834TUP 6317672 ENCODE Processing Pipeline 509ed1052051da43fe4fb739e335d00f https://www.encodeproject.org/files/ENCFF549VOY/@@download/ENCFF549VOY.bed.gz hg19 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF407JTS bed narrowPeak peaks ENCSR130HEG ChIP-seq EFO:0002067 K562 cell line Homo sapiens COPS2-human ENCAB643QQV DNA False 2016-09-26 ENCODE 1, 2 ENCFF160VXC, ENCFF327GHK, ENCFF494NSZ, ENCFF834TUP 7223483 ENCODE Processing Pipeline cc3655f625f6cb14c1164987c83545d1 https://www.encodeproject.org/files/ENCFF407JTS/@@download/ENCFF407JTS.bed.gz hg19 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF594XPN bigBed narrowPeak peaks ENCSR130HEG ChIP-seq EFO:0002067 K562 cell line Homo sapiens COPS2-human ENCAB643QQV DNA False 2016-09-26 ENCODE 2 ENCFF549VOY 11242565 ENCODE Processing Pipeline be0f31a85f0f3b6ba4542216c3be055b https://www.encodeproject.org/files/ENCFF594XPN/@@download/ENCFF594XPN.bigBed hg19 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF244QWX bigBed narrowPeak peaks ENCSR130HEG ChIP-seq EFO:0002067 K562 cell line Homo sapiens COPS2-human ENCAB643QQV DNA False 2016-09-26 ENCODE 1 ENCFF285LKH 11152215 ENCODE Processing Pipeline 1f187143d7ada33fb222503cae794fbd https://www.encodeproject.org/files/ENCFF244QWX/@@download/ENCFF244QWX.bigBed hg19 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF092GNI bed narrowPeak conservative idr thresholded peaks ENCSR130HEG ChIP-seq EFO:0002067 K562 cell line Homo sapiens COPS2-human ENCAB643QQV DNA False 2016-09-26 ENCODE 1, 2 ENCFF001TDO, ENCFF285LKH, ENCFF407JTS, ENCFF549VOY 1006 ENCODE Processing Pipeline adedc8be7cf75f5bd62dd37894163ab4 https://www.encodeproject.org/files/ENCFF092GNI/@@download/ENCFF092GNI.bed.gz hg19 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF533GEY bigBed narrowPeak peaks ENCSR130HEG ChIP-seq EFO:0002067 K562 cell line Homo sapiens COPS2-human ENCAB643QQV DNA False 2016-09-26 ENCODE 1, 2 ENCFF407JTS 11220618 ENCODE Processing Pipeline 01a33a1fdd93c3a5f6fe807616af28a3 https://www.encodeproject.org/files/ENCFF533GEY/@@download/ENCFF533GEY.bigBed hg19 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF218DHF bigBed narrowPeak optimal idr thresholded peaks ENCSR130HEG ChIP-seq EFO:0002067 K562 cell line Homo sapiens COPS2-human ENCAB643QQV DNA False 2016-09-26 ENCODE 1, 2 ENCFF684MLP 75289 ENCODE Processing Pipeline d92061b2729e81b49719fcdd5cc26203 https://www.encodeproject.org/files/ENCFF218DHF/@@download/ENCFF218DHF.bigBed hg19 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF070WPA bigBed narrowPeak conservative idr thresholded peaks ENCSR130HEG ChIP-seq EFO:0002067 K562 cell line Homo sapiens COPS2-human ENCAB643QQV DNA False 2016-09-26 ENCODE 1, 2 ENCFF092GNI 76308 ENCODE Processing Pipeline 042d4ffbb87a79700793b261e29474c1 https://www.encodeproject.org/files/ENCFF070WPA/@@download/ENCFF070WPA.bigBed hg19 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF684MLP bed narrowPeak optimal idr thresholded peaks ENCSR130HEG ChIP-seq EFO:0002067 K562 cell line Homo sapiens COPS2-human ENCAB643QQV DNA False 2016-09-26 ENCODE 1, 2 ENCFF001TDO, ENCFF285LKH, ENCFF407JTS, ENCFF549VOY 2643 ENCODE Processing Pipeline 2044df5f64a51f66c629269a417138c3 https://www.encodeproject.org/files/ENCFF684MLP/@@download/ENCFF684MLP.bed.gz hg19 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF912RZW bigWig signal p-value ENCSR130HEG ChIP-seq EFO:0002067 K562 cell line Homo sapiens COPS2-human ENCAB643QQV DNA False 2016-09-26 ENCODE 2 ENCFF423MBY 1219019900 ENCODE Processing Pipeline 3c6ea01e0a286b2897737f1750394914 https://www.encodeproject.org/files/ENCFF912RZW/@@download/ENCFF912RZW.bigWig GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF590VTK bigWig signal p-value ENCSR130HEG ChIP-seq EFO:0002067 K562 cell line Homo sapiens COPS2-human ENCAB643QQV DNA False 2016-09-26 ENCODE 1 ENCFF307UCL 1680596147 ENCODE Processing Pipeline 5a5875bf1e98918fe2f176cd157bc0ca https://www.encodeproject.org/files/ENCFF590VTK/@@download/ENCFF590VTK.bigWig GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF427XWJ bigWig signal p-value ENCSR130HEG ChIP-seq EFO:0002067 K562 cell line Homo sapiens COPS2-human ENCAB643QQV DNA False 2016-09-26 ENCODE 1, 2 ENCFF307UCL, ENCFF423MBY 1900604174 ENCODE Processing Pipeline ec1bbcd14e832e9bd87584e2382d6b56 https://www.encodeproject.org/files/ENCFF427XWJ/@@download/ENCFF427XWJ.bigWig GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF156NAU bigWig fold change over control ENCSR130HEG ChIP-seq EFO:0002067 K562 cell line Homo sapiens COPS2-human ENCAB643QQV DNA False 2016-09-26 ENCODE 1 ENCFF307UCL 2018165363 ENCODE Processing Pipeline 8e66233a3c221445726b185b95c439b3 https://www.encodeproject.org/files/ENCFF156NAU/@@download/ENCFF156NAU.bigWig GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF277XSH bigWig fold change over control ENCSR130HEG ChIP-seq EFO:0002067 K562 cell line Homo sapiens COPS2-human ENCAB643QQV DNA False 2016-09-26 ENCODE 2 ENCFF423MBY 1329820867 ENCODE Processing Pipeline 6bb13a189c68dd206b173ce7d1b59095 https://www.encodeproject.org/files/ENCFF277XSH/@@download/ENCFF277XSH.bigWig GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF954FLY bigWig fold change over control ENCSR130HEG ChIP-seq EFO:0002067 K562 cell line Homo sapiens COPS2-human ENCAB643QQV DNA False 2016-09-26 ENCODE 1, 2 ENCFF307UCL, ENCFF423MBY 2454602849 ENCODE Processing Pipeline d56cf84a96895b4bd0d0875c6691d32b https://www.encodeproject.org/files/ENCFF954FLY/@@download/ENCFF954FLY.bigWig GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF622EZH bed narrowPeak peaks ENCSR130HEG ChIP-seq EFO:0002067 K562 cell line Homo sapiens COPS2-human ENCAB643QQV DNA False 2016-09-26 ENCODE 2 ENCFF423MBY 6057544 ENCODE Processing Pipeline c7a64bb30cabc10412bf2a5f236948c0 https://www.encodeproject.org/files/ENCFF622EZH/@@download/ENCFF622EZH.bed.gz GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF058FSO bed narrowPeak peaks ENCSR130HEG ChIP-seq EFO:0002067 K562 cell line Homo sapiens COPS2-human ENCAB643QQV DNA False 2016-09-26 ENCODE 1 ENCFF307UCL 6739760 ENCODE Processing Pipeline 9500af3d46dba2d519e16d15e3392506 https://www.encodeproject.org/files/ENCFF058FSO/@@download/ENCFF058FSO.bed.gz GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF398ETF bigBed narrowPeak peaks ENCSR130HEG ChIP-seq EFO:0002067 K562 cell line Homo sapiens COPS2-human ENCAB643QQV DNA False 2016-09-26 ENCODE 1 ENCFF058FSO 11172274 ENCODE Processing Pipeline 8425630cf356ddc22212df58295113ee https://www.encodeproject.org/files/ENCFF398ETF/@@download/ENCFF398ETF.bigBed GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF767YBD bigBed narrowPeak peaks ENCSR130HEG ChIP-seq EFO:0002067 K562 cell line Homo sapiens COPS2-human ENCAB643QQV DNA False 2016-09-26 ENCODE 2 ENCFF622EZH 11256574 ENCODE Processing Pipeline fe1b855eb097d028d5df91bc17c6382b https://www.encodeproject.org/files/ENCFF767YBD/@@download/ENCFF767YBD.bigBed GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF971AJH bigBed narrowPeak peaks ENCSR130HEG ChIP-seq EFO:0002067 K562 cell line Homo sapiens COPS2-human ENCAB643QQV DNA False 2016-09-26 ENCODE 1, 2 ENCFF887WEF 11243905 ENCODE Processing Pipeline acbd18125e2c6f690eddd3e462a3ecff https://www.encodeproject.org/files/ENCFF971AJH/@@download/ENCFF971AJH.bigBed GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF887WEF bed narrowPeak peaks ENCSR130HEG ChIP-seq EFO:0002067 K562 cell line Homo sapiens COPS2-human ENCAB643QQV DNA False 2016-09-26 ENCODE 1, 2 ENCFF307UCL, ENCFF423MBY 7191289 ENCODE Processing Pipeline b34e7cabe7360ee57d195e227a68c6f4 https://www.encodeproject.org/files/ENCFF887WEF/@@download/ENCFF887WEF.bed.gz GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF059THO bed narrowPeak conservative idr thresholded peaks ENCSR130HEG ChIP-seq EFO:0002067 K562 cell line Homo sapiens COPS2-human ENCAB643QQV DNA False 2016-09-26 ENCODE 1, 2 ENCFF058FSO, ENCFF419RSJ, ENCFF622EZH, ENCFF887WEF 1334 ENCODE Processing Pipeline 6dbbc2b69076d4d0501140a63d450f18 https://www.encodeproject.org/files/ENCFF059THO/@@download/ENCFF059THO.bed.gz GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF142WGZ bigBed narrowPeak conservative idr thresholded peaks ENCSR130HEG ChIP-seq EFO:0002067 K562 cell line Homo sapiens COPS2-human ENCAB643QQV DNA False 2016-09-26 ENCODE 1, 2 ENCFF059THO 31392 ENCODE Processing Pipeline 41989fc59fc14e8a51e96a3195467b32 https://www.encodeproject.org/files/ENCFF142WGZ/@@download/ENCFF142WGZ.bigBed GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF669VMK bigBed narrowPeak optimal idr thresholded peaks ENCSR130HEG ChIP-seq EFO:0002067 K562 cell line Homo sapiens COPS2-human ENCAB643QQV DNA False 2016-09-26 ENCODE 1, 2 ENCFF552EBC 35274 ENCODE Processing Pipeline bdaf66b18ca67157a637dba3510378d3 https://www.encodeproject.org/files/ENCFF669VMK/@@download/ENCFF669VMK.bigBed GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF552EBC bed narrowPeak optimal idr thresholded peaks ENCSR130HEG ChIP-seq EFO:0002067 K562 cell line Homo sapiens COPS2-human ENCAB643QQV DNA False 2016-09-26 ENCODE 1, 2 ENCFF058FSO, ENCFF419RSJ, ENCFF622EZH, ENCFF887WEF 2809 ENCODE Processing Pipeline 436543136748f9d0edf5851f8ca91c2c https://www.encodeproject.org/files/ENCFF552EBC/@@download/ENCFF552EBC.bed.gz GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF754PHR bam unfiltered alignments ENCSR277DMR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ETV1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 2 100 ENCFF548SNS, ENCFF807MUK, ENCFF898MPN 5387473001 ENCODE Processing Pipeline c4b645a122f763e3b2333da3c328cd73 https://www.encodeproject.org/files/ENCFF754PHR/@@download/ENCFF754PHR.bam hg19 released control low read depth, missing genetic modification characterization, low read depth ENCFF126EBO bam unfiltered alignments ENCSR277DMR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ETV1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1 100 ENCFF807MUK, ENCFF865UHF, ENCFF990FFM 3361129832 ENCODE Processing Pipeline 9a572fcb1468630d2f7577a3e657e45d https://www.encodeproject.org/files/ENCFF126EBO/@@download/ENCFF126EBO.bam hg19 released control low read depth, missing genetic modification characterization, low read depth ENCFF548SNS fastq reads ENCSR277DMR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ETV1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 2 1 100 paired-ended 1 ENCFF898MPN 2467330143 Michael Snyder, Stanford 006ddecfef7da4399e5463ac391db569 SRA:SRR5111359 https://www.encodeproject.org/files/ENCFF548SNS/@@download/ENCFF548SNS.fastq.gz Illumina HiSeq 2000 /files/ENCFF487HZM/ released control low read depth, missing genetic modification characterization, low read depth ENCFF865UHF fastq reads ENCSR277DMR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ETV1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1 1 100 paired-ended 2 ENCFF990FFM 1548780859 Michael Snyder, Stanford 516f14bc99210afd53f6666a0a1f2cdf SRA:SRR5111358 https://www.encodeproject.org/files/ENCFF865UHF/@@download/ENCFF865UHF.fastq.gz Illumina HiSeq 2000 /files/ENCFF510RBZ/ released control low read depth, missing genetic modification characterization, low read depth ENCFF898MPN fastq reads ENCSR277DMR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ETV1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 2 1 100 paired-ended 2 ENCFF548SNS 2438105924 Michael Snyder, Stanford 794dbed2872c69da0a1a3c9aa49d53f6 SRA:SRR5111359 https://www.encodeproject.org/files/ENCFF898MPN/@@download/ENCFF898MPN.fastq.gz Illumina HiSeq 2000 /files/ENCFF510RBZ/ released control low read depth, missing genetic modification characterization, low read depth ENCFF990FFM fastq reads ENCSR277DMR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ETV1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1 1 100 paired-ended 1 ENCFF865UHF 1468239433 Michael Snyder, Stanford abcd9cbdb041caeec9a65a408fef8af3 SRA:SRR5111358 https://www.encodeproject.org/files/ENCFF990FFM/@@download/ENCFF990FFM.fastq.gz Illumina HiSeq 2000 /files/ENCFF487HZM/ released control low read depth, missing genetic modification characterization, low read depth ENCFF956MXT bam alignments ENCSR277DMR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ETV1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1 100 ENCFF807MUK, ENCFF865UHF, ENCFF990FFM 2813146266 ENCODE Processing Pipeline 1b7d4c52d5ce1c2d548c94b24d59f5bd https://www.encodeproject.org/files/ENCFF956MXT/@@download/ENCFF956MXT.bam hg19 released control low read depth, missing genetic modification characterization, low read depth ENCFF134DGA bam alignments ENCSR277DMR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ETV1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 2 100 ENCFF548SNS, ENCFF807MUK, ENCFF898MPN 4551397097 ENCODE Processing Pipeline 02aa5f53455f82dbf7eb66aaf638eb00 https://www.encodeproject.org/files/ENCFF134DGA/@@download/ENCFF134DGA.bam hg19 released control low read depth, missing genetic modification characterization, low read depth ENCFF180SRK bigWig signal p-value ENCSR277DMR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ETV1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1 ENCFF504MHQ, ENCFF956MXT 533143607 ENCODE Processing Pipeline 0490a866e53094afa6d4942d0ac3a9dd https://www.encodeproject.org/files/ENCFF180SRK/@@download/ENCFF180SRK.bigWig hg19 released control low read depth, missing genetic modification characterization, low read depth ENCFF595YYG bigWig signal p-value ENCSR277DMR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ETV1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 2 ENCFF134DGA, ENCFF504MHQ 501577705 ENCODE Processing Pipeline 0c7b04cca10d3f664cd820a230884b45 https://www.encodeproject.org/files/ENCFF595YYG/@@download/ENCFF595YYG.bigWig hg19 released control low read depth, missing genetic modification characterization, low read depth ENCFF559ULD bigWig signal p-value ENCSR277DMR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ETV1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF134DGA, ENCFF504MHQ, ENCFF956MXT 522413973 ENCODE Processing Pipeline 52e32ba53f2231ab8bb76095006508ee https://www.encodeproject.org/files/ENCFF559ULD/@@download/ENCFF559ULD.bigWig hg19 released control low read depth, missing genetic modification characterization, low read depth ENCFF775ZLD bigWig fold change over control ENCSR277DMR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ETV1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 2 ENCFF134DGA, ENCFF504MHQ 752781385 ENCODE Processing Pipeline eddbd84e47eb50e106d3315ab2c38d92 https://www.encodeproject.org/files/ENCFF775ZLD/@@download/ENCFF775ZLD.bigWig hg19 released control low read depth, missing genetic modification characterization, low read depth ENCFF283MZY bigWig fold change over control ENCSR277DMR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ETV1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF134DGA, ENCFF504MHQ, ENCFF956MXT 1102644964 ENCODE Processing Pipeline 4bead6fa6189142d1c6577a47763471a https://www.encodeproject.org/files/ENCFF283MZY/@@download/ENCFF283MZY.bigWig hg19 released control low read depth, missing genetic modification characterization, low read depth ENCFF253MPM bigWig fold change over control ENCSR277DMR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ETV1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1 ENCFF504MHQ, ENCFF956MXT 560893072 ENCODE Processing Pipeline 2b01ab81076a2fa7f7b5a97794629bf6 https://www.encodeproject.org/files/ENCFF253MPM/@@download/ENCFF253MPM.bigWig hg19 released control low read depth, missing genetic modification characterization, low read depth ENCFF692PZN bed narrowPeak peaks ENCSR277DMR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ETV1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 2 ENCFF134DGA, ENCFF504MHQ 5762717 ENCODE Processing Pipeline 451091687b3aefde73fb058b458e4c48 https://www.encodeproject.org/files/ENCFF692PZN/@@download/ENCFF692PZN.bed.gz hg19 released control low read depth, missing genetic modification characterization, low read depth ENCFF645BHJ bed narrowPeak peaks ENCSR277DMR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ETV1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1 ENCFF504MHQ, ENCFF956MXT 5519587 ENCODE Processing Pipeline 5be4408221069af6c93c53b0359ca945 https://www.encodeproject.org/files/ENCFF645BHJ/@@download/ENCFF645BHJ.bed.gz hg19 released control low read depth, missing genetic modification characterization, low read depth ENCFF421DGE bed narrowPeak peaks ENCSR277DMR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ETV1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF134DGA, ENCFF504MHQ, ENCFF956MXT 6621004 ENCODE Processing Pipeline e080afe1cdb9112a0faa67d47f8cc323 https://www.encodeproject.org/files/ENCFF421DGE/@@download/ENCFF421DGE.bed.gz hg19 released control low read depth, missing genetic modification characterization, low read depth ENCFF839EAL bigBed narrowPeak peaks ENCSR277DMR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ETV1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 2 ENCFF692PZN 11087671 ENCODE Processing Pipeline 9a39ec9778399cb51f8c18e132253c43 https://www.encodeproject.org/files/ENCFF839EAL/@@download/ENCFF839EAL.bigBed hg19 released control low read depth, missing genetic modification characterization, low read depth ENCFF849LZZ bigBed narrowPeak peaks ENCSR277DMR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ETV1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1 ENCFF645BHJ 11073257 ENCODE Processing Pipeline f3613f1724b65374f82581a0052dedb7 https://www.encodeproject.org/files/ENCFF849LZZ/@@download/ENCFF849LZZ.bigBed hg19 released control low read depth, missing genetic modification characterization, low read depth ENCFF514ZLW bigBed narrowPeak peaks ENCSR277DMR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ETV1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF421DGE 13080730 ENCODE Processing Pipeline 09b1764d39a3a0dad718d192f9056a67 https://www.encodeproject.org/files/ENCFF514ZLW/@@download/ENCFF514ZLW.bigBed hg19 released control low read depth, missing genetic modification characterization, low read depth ENCFF743WHS bam unfiltered alignments ENCSR277DMR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ETV1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 2 100 ENCFF548SNS, ENCFF643CGH, ENCFF898MPN 5395376189 ENCODE Processing Pipeline 7fc4f20de43eee0f2e4545c5d9dba871 https://www.encodeproject.org/files/ENCFF743WHS/@@download/ENCFF743WHS.bam GRCh38 released control low read depth, missing genetic modification characterization, low read depth ENCFF631AMI bam unfiltered alignments ENCSR277DMR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ETV1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1 100 ENCFF643CGH, ENCFF865UHF, ENCFF990FFM 3365002172 ENCODE Processing Pipeline 0925ac44a25967794ef0dfa7c4d44d13 https://www.encodeproject.org/files/ENCFF631AMI/@@download/ENCFF631AMI.bam GRCh38 released control low read depth, missing genetic modification characterization, low read depth ENCFF656BKZ bam alignments ENCSR277DMR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ETV1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 2 100 ENCFF548SNS, ENCFF643CGH, ENCFF898MPN 4551293399 ENCODE Processing Pipeline 8943d1611f1b499a13f0674815ff82dd https://www.encodeproject.org/files/ENCFF656BKZ/@@download/ENCFF656BKZ.bam GRCh38 released control low read depth, missing genetic modification characterization, low read depth ENCFF670SFK bam alignments ENCSR277DMR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ETV1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1 100 ENCFF643CGH, ENCFF865UHF, ENCFF990FFM 2812631763 ENCODE Processing Pipeline a85b263d608a6a5a60ec2f11c8755826 https://www.encodeproject.org/files/ENCFF670SFK/@@download/ENCFF670SFK.bam GRCh38 released control low read depth, missing genetic modification characterization, low read depth ENCFF393WZB bigWig signal p-value ENCSR277DMR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ETV1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1 ENCFF102ZZG, ENCFF670SFK 535751566 ENCODE Processing Pipeline 65da658fe7c2c58bb6413a88f5c7e758 https://www.encodeproject.org/files/ENCFF393WZB/@@download/ENCFF393WZB.bigWig GRCh38 released control low read depth, missing genetic modification characterization, low read depth ENCFF202HRI bigWig signal p-value ENCSR277DMR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ETV1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 2 ENCFF102ZZG, ENCFF656BKZ 502176207 ENCODE Processing Pipeline 27ee8b8b354fb0e23109aa330d51f252 https://www.encodeproject.org/files/ENCFF202HRI/@@download/ENCFF202HRI.bigWig GRCh38 released control low read depth, missing genetic modification characterization, low read depth ENCFF841YBZ bigWig signal p-value ENCSR277DMR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ETV1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF102ZZG, ENCFF656BKZ, ENCFF670SFK 525457341 ENCODE Processing Pipeline 574089989f2a89f4388390c96629097d https://www.encodeproject.org/files/ENCFF841YBZ/@@download/ENCFF841YBZ.bigWig GRCh38 released control low read depth, missing genetic modification characterization, low read depth ENCFF580XFG bigWig fold change over control ENCSR277DMR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ETV1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1 ENCFF102ZZG, ENCFF670SFK 564668279 ENCODE Processing Pipeline aab0ec0d1123e46de02ad661c9da3996 https://www.encodeproject.org/files/ENCFF580XFG/@@download/ENCFF580XFG.bigWig GRCh38 released control low read depth, missing genetic modification characterization, low read depth ENCFF498ETW bigWig fold change over control ENCSR277DMR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ETV1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 2 ENCFF102ZZG, ENCFF656BKZ 757092100 ENCODE Processing Pipeline 2332d836fe62b2550f4f1548c5526095 https://www.encodeproject.org/files/ENCFF498ETW/@@download/ENCFF498ETW.bigWig GRCh38 released control low read depth, missing genetic modification characterization, low read depth ENCFF344GVP bigWig fold change over control ENCSR277DMR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ETV1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF102ZZG, ENCFF656BKZ, ENCFF670SFK 1109078847 ENCODE Processing Pipeline a22faef30276ccb11e57b4896d0e0a03 https://www.encodeproject.org/files/ENCFF344GVP/@@download/ENCFF344GVP.bigWig GRCh38 released control low read depth, missing genetic modification characterization, low read depth ENCFF812JMG bed narrowPeak peaks ENCSR277DMR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ETV1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 2 ENCFF102ZZG, ENCFF656BKZ 5592616 ENCODE Processing Pipeline 4e3ba65ee3b7bbaf17915f4298cae7d8 https://www.encodeproject.org/files/ENCFF812JMG/@@download/ENCFF812JMG.bed.gz GRCh38 released control low read depth, missing genetic modification characterization, low read depth ENCFF543FMX bed narrowPeak peaks ENCSR277DMR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ETV1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1 ENCFF102ZZG, ENCFF670SFK 5394840 ENCODE Processing Pipeline 4da059ec466c4e74d9abf7f953967290 https://www.encodeproject.org/files/ENCFF543FMX/@@download/ENCFF543FMX.bed.gz GRCh38 released control low read depth, missing genetic modification characterization, low read depth ENCFF268KZF bed narrowPeak peaks ENCSR277DMR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ETV1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF102ZZG, ENCFF656BKZ, ENCFF670SFK 6470265 ENCODE Processing Pipeline 562aef28aefc237c01668768e3f10222 https://www.encodeproject.org/files/ENCFF268KZF/@@download/ENCFF268KZF.bed.gz GRCh38 released control low read depth, missing genetic modification characterization, low read depth ENCFF920NIX bigBed narrowPeak peaks ENCSR277DMR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ETV1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1 ENCFF543FMX 11044638 ENCODE Processing Pipeline 323fc8796b6128c4f0ffe1cff6cd4eae https://www.encodeproject.org/files/ENCFF920NIX/@@download/ENCFF920NIX.bigBed GRCh38 released control low read depth, missing genetic modification characterization, low read depth ENCFF880KFR bigBed narrowPeak peaks ENCSR277DMR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ETV1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 2 ENCFF812JMG 11038096 ENCODE Processing Pipeline 56254cf3865d6eaee30c45f47c9b5301 https://www.encodeproject.org/files/ENCFF880KFR/@@download/ENCFF880KFR.bigBed GRCh38 released control low read depth, missing genetic modification characterization, low read depth ENCFF964JMZ bigBed narrowPeak peaks ENCSR277DMR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ETV1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF268KZF 13090298 ENCODE Processing Pipeline 70fe3bdd23410467329138b21b449b9e https://www.encodeproject.org/files/ENCFF964JMZ/@@download/ENCFF964JMZ.bigBed GRCh38 released control low read depth, missing genetic modification characterization, low read depth ENCFF804KSB bed narrowPeak optimal idr thresholded peaks ENCSR277DMR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ETV1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF268KZF, ENCFF419RSJ, ENCFF543FMX, ENCFF812JMG 388044 ENCODE Processing Pipeline e04edf5fc2da7d2b966ebe8ec4e4296c https://www.encodeproject.org/files/ENCFF804KSB/@@download/ENCFF804KSB.bed.gz GRCh38 released control low read depth, missing genetic modification characterization, low read depth ENCFF091BLE bigBed narrowPeak optimal idr thresholded peaks ENCSR277DMR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ETV1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF804KSB 815562 ENCODE Processing Pipeline aa5b8da8af20134ffb3a967b99232da6 https://www.encodeproject.org/files/ENCFF091BLE/@@download/ENCFF091BLE.bigBed GRCh38 released control low read depth, missing genetic modification characterization, low read depth ENCFF332WRL bed narrowPeak conservative idr thresholded peaks ENCSR277DMR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ETV1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF001TDO, ENCFF421DGE, ENCFF645BHJ, ENCFF692PZN 330015 ENCODE Processing Pipeline 64dd3223c154b5af1dd1e9f5a68f6bed https://www.encodeproject.org/files/ENCFF332WRL/@@download/ENCFF332WRL.bed.gz hg19 released control low read depth, missing genetic modification characterization, low read depth ENCFF404YMX bed narrowPeak optimal idr thresholded peaks ENCSR277DMR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ETV1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF001TDO, ENCFF421DGE, ENCFF645BHJ, ENCFF692PZN 364092 ENCODE Processing Pipeline 45811baa3b4f022a78ddb6fa4be88278 https://www.encodeproject.org/files/ENCFF404YMX/@@download/ENCFF404YMX.bed.gz hg19 released control low read depth, missing genetic modification characterization, low read depth ENCFF139OHF bigBed narrowPeak optimal idr thresholded peaks ENCSR277DMR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ETV1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF404YMX 621913 ENCODE Processing Pipeline 54e00f74fec64d42596a1e1ded720e3b https://www.encodeproject.org/files/ENCFF139OHF/@@download/ENCFF139OHF.bigBed hg19 released control low read depth, missing genetic modification characterization, low read depth ENCFF684GEJ bigBed narrowPeak conservative idr thresholded peaks ENCSR277DMR ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ETV1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF332WRL 579981 ENCODE Processing Pipeline cb518b89f197b120e8d90b81e7c8c11c https://www.encodeproject.org/files/ENCFF684GEJ/@@download/ENCFF684GEJ.bigBed hg19 released control low read depth, missing genetic modification characterization, low read depth ENCFF000PYL bam alignments ENCSR000BLI ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F6-human ENCAB000AFW DNA see document see document False 2011-07-18 ENCODE 1 1 822323706 Richard Myers, HAIB 4b50d6ec5a461cb8e7a21df588cda8aa https://www.encodeproject.org/files/ENCFF000PYL/@@download/ENCFF000PYL.bam hg19 archived control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample, missing derived_from poor library complexity, insufficient read depth, severe bottlenecking ENCFF000PYM bigBed broadPeak peaks ENCSR000BLI ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F6-human ENCAB000AFW DNA see document see document False 2011-07-18 ENCODE 1 1 ENCFF001UJP 462103 Richard Myers, HAIB 5a4267440ca02043d34a40286865b120 https://www.encodeproject.org/files/ENCFF000PYM/@@download/ENCFF000PYM.bigBed hg19 archived control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample poor library complexity, insufficient read depth, severe bottlenecking ENCFF000PYN bigBed broadPeak peaks ENCSR000BLI ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F6-human ENCAB000AFW DNA see document see document False 2011-07-18 ENCODE 2 1 ENCFF001UJQ 1249083 Richard Myers, HAIB 8b8f1a6772c3d173a2fedb1880455456 https://www.encodeproject.org/files/ENCFF000PYN/@@download/ENCFF000PYN.bigBed hg19 archived control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample poor library complexity, insufficient read depth, severe bottlenecking ENCFF000PYO bam alignments ENCSR000BLI ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F6-human ENCAB000AFW DNA see document see document False 2011-07-18 ENCODE 2 1 881691239 Richard Myers, HAIB e6dff4b3304ed6e58c2a15e0aea2d4e2 https://www.encodeproject.org/files/ENCFF000PYO/@@download/ENCFF000PYO.bam hg19 archived control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample, missing derived_from poor library complexity, insufficient read depth, severe bottlenecking ENCFF000PYQ bigWig raw signal ENCSR000BLI ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F6-human ENCAB000AFW DNA see document see document False 2011-07-18 ENCODE 1 1 17804709 Richard Myers, HAIB 8bdb31d94926a6f92f11ee0a459e6bf1 https://www.encodeproject.org/files/ENCFF000PYQ/@@download/ENCFF000PYQ.bigWig hg19 archived control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample, missing derived_from poor library complexity, insufficient read depth, severe bottlenecking ENCFF000PYS bigWig raw signal ENCSR000BLI ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F6-human ENCAB000AFW DNA see document see document False 2011-07-18 ENCODE 2 1 43870480 Richard Myers, HAIB ad0902f42a036598d84b378d07e3d6a3 https://www.encodeproject.org/files/ENCFF000PYS/@@download/ENCFF000PYS.bigWig hg19 archived control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample, missing derived_from poor library complexity, insufficient read depth, severe bottlenecking ENCFF000PYX fastq reads ENCSR000BLI ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F6-human ENCAB000AFW DNA see document see document False 2011-07-18 ENCODE 2 1 36 single-ended 963094529 Richard Myers, HAIB 30fd1904dccb981641efafdd34c7c8c1 https://www.encodeproject.org/files/ENCFF000PYX/@@download/ENCFF000PYX.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000QEU/ released control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample poor library complexity, insufficient read depth, severe bottlenecking ENCFF000PYZ fastq reads ENCSR000BLI ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F6-human ENCAB000AFW DNA see document see document False 2011-07-18 ENCODE 1 1 36 single-ended 1127180190 Richard Myers, HAIB 6e7dde2257d59de2d86a46ccf1ba5e6a https://www.encodeproject.org/files/ENCFF000PYZ/@@download/ENCFF000PYZ.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000QET/ released control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample poor library complexity, insufficient read depth, severe bottlenecking ENCFF001UJP bed broadPeak peaks ENCSR000BLI ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F6-human ENCAB000AFW DNA see document see document False 2011-07-18 ENCODE 1 1 230221 Richard Myers, HAIB 364cfc5d54f7780bb402a120882dfed5 https://www.encodeproject.org/files/ENCFF001UJP/@@download/ENCFF001UJP.bed.gz hg19 archived control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample, missing derived_from poor library complexity, insufficient read depth, severe bottlenecking ENCFF001UJQ bed broadPeak peaks ENCSR000BLI ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F6-human ENCAB000AFW DNA see document see document False 2011-07-18 ENCODE 2 1 658908 Richard Myers, HAIB 1486ee285d629ced2ce23190677784ae https://www.encodeproject.org/files/ENCFF001UJQ/@@download/ENCFF001UJQ.bed.gz hg19 archived control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample, missing derived_from poor library complexity, insufficient read depth, severe bottlenecking ENCFF002CLU bed narrowPeak optimal idr thresholded peaks ENCSR000BLI ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F6-human ENCAB000AFW DNA see document see document False 2011-07-18 ENCODE 495891 ENCODE Consortium Analysis Working Group b27d8f475ea230f1eb132ba49fd7bffe https://www.encodeproject.org/files/ENCFF002CLU/@@download/ENCFF002CLU.bed.gz hg19 archived control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample, missing derived_from poor library complexity, insufficient read depth, severe bottlenecking ENCFF721DHW bigBed narrowPeak optimal idr thresholded peaks ENCSR000BLI ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F6-human ENCAB000AFW DNA see document see document False 2011-07-18 ENCODE ENCFF002CLU 1287334 ENCODE Consortium 0f40eac98a204da32f831708f8d39b2b https://www.encodeproject.org/files/ENCFF721DHW/@@download/ENCFF721DHW.bigBed hg19 archived control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample poor library complexity, insufficient read depth, severe bottlenecking ENCFF386ZEB bam unfiltered alignments ENCSR000BLI ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F6-human ENCAB000AFW DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000PYZ, ENCFF807MUK 1278816511 ENCODE Processing Pipeline dedd5ec00d1aa1ec961df649552f8dca https://www.encodeproject.org/files/ENCFF386ZEB/@@download/ENCFF386ZEB.bam hg19 released control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample poor library complexity, insufficient read depth, severe bottlenecking ENCFF032EXY bam alignments ENCSR000BLI ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F6-human ENCAB000AFW DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000PYZ, ENCFF807MUK 310972759 ENCODE Processing Pipeline dbd8b6366013c6ed876c980d5246956f https://www.encodeproject.org/files/ENCFF032EXY/@@download/ENCFF032EXY.bam hg19 released control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample poor library complexity, insufficient read depth, severe bottlenecking ENCFF393OPU bam unfiltered alignments ENCSR000BLI ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F6-human ENCAB000AFW DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000PYX, ENCFF807MUK 1134642468 ENCODE Processing Pipeline a917587d0c7d7e8d26c9312770f4a1f2 https://www.encodeproject.org/files/ENCFF393OPU/@@download/ENCFF393OPU.bam hg19 released control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample poor library complexity, insufficient read depth, severe bottlenecking ENCFF620AHU bam alignments ENCSR000BLI ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F6-human ENCAB000AFW DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000PYX, ENCFF807MUK 457949625 ENCODE Processing Pipeline 02a2e2bb109ae341f790834e2edafe23 https://www.encodeproject.org/files/ENCFF620AHU/@@download/ENCFF620AHU.bam hg19 released control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample poor library complexity, insufficient read depth, severe bottlenecking ENCFF551QGI bam unfiltered alignments ENCSR000BLI ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F6-human ENCAB000AFW DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000PYZ, ENCFF643CGH 1282956672 ENCODE Processing Pipeline 2c797dcb531cfdeb7d141b32efdec19e https://www.encodeproject.org/files/ENCFF551QGI/@@download/ENCFF551QGI.bam GRCh38 released control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample poor library complexity, insufficient read depth, severe bottlenecking ENCFF665PGG bam unfiltered alignments ENCSR000BLI ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F6-human ENCAB000AFW DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000PYX, ENCFF643CGH 1136235528 ENCODE Processing Pipeline 05eb120fad757f96bfaaef56a7a251b0 https://www.encodeproject.org/files/ENCFF665PGG/@@download/ENCFF665PGG.bam GRCh38 released control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample poor library complexity, insufficient read depth, severe bottlenecking ENCFF823GCX bam alignments ENCSR000BLI ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F6-human ENCAB000AFW DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000PYZ, ENCFF643CGH 310697982 ENCODE Processing Pipeline 4f92bcecf3b99eb51ab9adf3ce3e3c1a https://www.encodeproject.org/files/ENCFF823GCX/@@download/ENCFF823GCX.bam GRCh38 released control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample poor library complexity, insufficient read depth, severe bottlenecking ENCFF827SLL bam alignments ENCSR000BLI ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F6-human ENCAB000AFW DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000PYX, ENCFF643CGH 457476245 ENCODE Processing Pipeline 2e9b3adafcbbb1f6494e6a76dfd99dfc https://www.encodeproject.org/files/ENCFF827SLL/@@download/ENCFF827SLL.bam GRCh38 released control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample poor library complexity, insufficient read depth, severe bottlenecking ENCFF631VAT bigWig fold change over control ENCSR000BLI ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F6-human ENCAB000AFW DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF234NVU, ENCFF823GCX, ENCFF827SLL, ENCFF913HVS 367095664 ENCODE Processing Pipeline dedf2788ca990f96b98127eca54f3043 https://www.encodeproject.org/files/ENCFF631VAT/@@download/ENCFF631VAT.bigWig GRCh38 released control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample poor library complexity, insufficient read depth, severe bottlenecking ENCFF600KSR bed narrowPeak peaks ENCSR000BLI ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F6-human ENCAB000AFW DNA see document see document False 2011-07-18 ENCODE 2 ENCFF234NVU, ENCFF827SLL 4618643 ENCODE Processing Pipeline f80fb0a330e853076d1ecde97c30d612 https://www.encodeproject.org/files/ENCFF600KSR/@@download/ENCFF600KSR.bed.gz GRCh38 released control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample poor library complexity, insufficient read depth, severe bottlenecking ENCFF367DJC bigBed narrowPeak conservative idr thresholded peaks ENCSR000BLI ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F6-human ENCAB000AFW DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF160TXQ 633959 ENCODE Processing Pipeline af6b78542dc44983e74f960ff2ff6964 https://www.encodeproject.org/files/ENCFF367DJC/@@download/ENCFF367DJC.bigBed GRCh38 released control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample poor library complexity, insufficient read depth, severe bottlenecking ENCFF178MCM bigWig fold change over control ENCSR000BLI ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F6-human ENCAB000AFW DNA see document see document False 2011-07-18 ENCODE 1 ENCFF823GCX, ENCFF913HVS 144286414 ENCODE Processing Pipeline 2cdd8aeda2dda8e589b246c831cbed6d https://www.encodeproject.org/files/ENCFF178MCM/@@download/ENCFF178MCM.bigWig GRCh38 released control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample poor library complexity, insufficient read depth, severe bottlenecking ENCFF387JQM bed narrowPeak peaks ENCSR000BLI ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F6-human ENCAB000AFW DNA see document see document False 2011-07-18 ENCODE 1 ENCFF823GCX, ENCFF913HVS 2327422 ENCODE Processing Pipeline 919ab98f1062428b5bacc0e4b1fa2c45 https://www.encodeproject.org/files/ENCFF387JQM/@@download/ENCFF387JQM.bed.gz GRCh38 released control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample poor library complexity, insufficient read depth, severe bottlenecking ENCFF111LUX bed narrowPeak peaks ENCSR000BLI ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F6-human ENCAB000AFW DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF234NVU, ENCFF823GCX, ENCFF827SLL, ENCFF913HVS 5407264 ENCODE Processing Pipeline 8151ed30cf0e34d025af1edbe8c3f1f9 https://www.encodeproject.org/files/ENCFF111LUX/@@download/ENCFF111LUX.bed.gz GRCh38 released control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample poor library complexity, insufficient read depth, severe bottlenecking ENCFF390HFN bigBed narrowPeak peaks ENCSR000BLI ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F6-human ENCAB000AFW DNA see document see document False 2011-07-18 ENCODE 1 ENCFF387JQM 4748073 ENCODE Processing Pipeline 80f0a29119bd413114ea5d7bdc20f717 https://www.encodeproject.org/files/ENCFF390HFN/@@download/ENCFF390HFN.bigBed GRCh38 released control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample poor library complexity, insufficient read depth, severe bottlenecking ENCFF801QVO bigBed narrowPeak optimal idr thresholded peaks ENCSR000BLI ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F6-human ENCAB000AFW DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF533GSH 1115030 ENCODE Processing Pipeline e0cc80ceedc2a75ac71a6d6bfdd2b578 https://www.encodeproject.org/files/ENCFF801QVO/@@download/ENCFF801QVO.bigBed GRCh38 released control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample poor library complexity, insufficient read depth, severe bottlenecking ENCFF801JVB bigWig signal p-value ENCSR000BLI ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F6-human ENCAB000AFW DNA see document see document False 2011-07-18 ENCODE 1 ENCFF823GCX, ENCFF913HVS 306250193 ENCODE Processing Pipeline c287fa83d37a5d47a8746e44ea86b6aa https://www.encodeproject.org/files/ENCFF801JVB/@@download/ENCFF801JVB.bigWig GRCh38 released control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample poor library complexity, insufficient read depth, severe bottlenecking ENCFF028RYK bigWig signal p-value ENCSR000BLI ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F6-human ENCAB000AFW DNA see document see document False 2011-07-18 ENCODE 2 ENCFF234NVU, ENCFF827SLL 308236039 ENCODE Processing Pipeline 9b9fe2654a338ee643cd506f7c496dbc https://www.encodeproject.org/files/ENCFF028RYK/@@download/ENCFF028RYK.bigWig GRCh38 released control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample poor library complexity, insufficient read depth, severe bottlenecking ENCFF933BWN bigWig signal p-value ENCSR000BLI ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F6-human ENCAB000AFW DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF234NVU, ENCFF823GCX, ENCFF827SLL, ENCFF913HVS 578060235 ENCODE Processing Pipeline 1848013f123443a0ce5ad6962200eff1 https://www.encodeproject.org/files/ENCFF933BWN/@@download/ENCFF933BWN.bigWig GRCh38 released control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample poor library complexity, insufficient read depth, severe bottlenecking ENCFF779QGH bigWig fold change over control ENCSR000BLI ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F6-human ENCAB000AFW DNA see document see document False 2011-07-18 ENCODE 2 ENCFF234NVU, ENCFF827SLL 182569393 ENCODE Processing Pipeline ed9a7217c94fc78f0c5f1bcb7d83a083 https://www.encodeproject.org/files/ENCFF779QGH/@@download/ENCFF779QGH.bigWig GRCh38 released control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample poor library complexity, insufficient read depth, severe bottlenecking ENCFF097LYC bigBed narrowPeak peaks ENCSR000BLI ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F6-human ENCAB000AFW DNA see document see document False 2011-07-18 ENCODE 2 ENCFF600KSR 10188455 ENCODE Processing Pipeline 8a76730e139f9a7fc13b2609c0c1fb97 https://www.encodeproject.org/files/ENCFF097LYC/@@download/ENCFF097LYC.bigBed GRCh38 released control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample poor library complexity, insufficient read depth, severe bottlenecking ENCFF653OIU bigBed narrowPeak peaks ENCSR000BLI ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F6-human ENCAB000AFW DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF111LUX 13201275 ENCODE Processing Pipeline 100b546549290ea7fbc9cca374cef2b5 https://www.encodeproject.org/files/ENCFF653OIU/@@download/ENCFF653OIU.bigBed GRCh38 released control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample poor library complexity, insufficient read depth, severe bottlenecking ENCFF160TXQ bed narrowPeak conservative idr thresholded peaks ENCSR000BLI ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F6-human ENCAB000AFW DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF111LUX, ENCFF387JQM, ENCFF419RSJ, ENCFF600KSR 336013 ENCODE Processing Pipeline 4b878558672672e2613aaced03c649fe https://www.encodeproject.org/files/ENCFF160TXQ/@@download/ENCFF160TXQ.bed.gz GRCh38 released control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample poor library complexity, insufficient read depth, severe bottlenecking ENCFF533GSH bed narrowPeak optimal idr thresholded peaks ENCSR000BLI ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F6-human ENCAB000AFW DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF111LUX, ENCFF387JQM, ENCFF419RSJ, ENCFF600KSR 533841 ENCODE Processing Pipeline 7d606acf8a9036afa2f4744e0e01b98b https://www.encodeproject.org/files/ENCFF533GSH/@@download/ENCFF533GSH.bed.gz GRCh38 released control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample poor library complexity, insufficient read depth, severe bottlenecking ENCFF581MUK bigWig signal p-value ENCSR000BLI ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F6-human ENCAB000AFW DNA see document see document False 2011-07-18 ENCODE 1 ENCFF032EXY, ENCFF701KUD 370403480 ENCODE Processing Pipeline c0c62d338a37e2b2e5fb08ca3b8a9590 https://www.encodeproject.org/files/ENCFF581MUK/@@download/ENCFF581MUK.bigWig hg19 released control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample poor library complexity, insufficient read depth, severe bottlenecking ENCFF401YGB bigWig signal p-value ENCSR000BLI ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F6-human ENCAB000AFW DNA see document see document False 2011-07-18 ENCODE 2 ENCFF585PFH, ENCFF620AHU 357297017 ENCODE Processing Pipeline 8c1ae02733dc53a8c2e3e3db6227c472 https://www.encodeproject.org/files/ENCFF401YGB/@@download/ENCFF401YGB.bigWig hg19 released control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample poor library complexity, insufficient read depth, severe bottlenecking ENCFF321IMA bigWig fold change over control ENCSR000BLI ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F6-human ENCAB000AFW DNA see document see document False 2011-07-18 ENCODE 1 ENCFF032EXY, ENCFF701KUD 143035737 ENCODE Processing Pipeline 7823a63db9f589371884b87b799a23f3 https://www.encodeproject.org/files/ENCFF321IMA/@@download/ENCFF321IMA.bigWig hg19 released control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample poor library complexity, insufficient read depth, severe bottlenecking ENCFF072IAO bed narrowPeak peaks ENCSR000BLI ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F6-human ENCAB000AFW DNA see document see document False 2011-07-18 ENCODE 2 ENCFF585PFH, ENCFF620AHU 4618271 ENCODE Processing Pipeline ae10aa547fd6fab5d59fa959444e259c https://www.encodeproject.org/files/ENCFF072IAO/@@download/ENCFF072IAO.bed.gz hg19 released control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample poor library complexity, insufficient read depth, severe bottlenecking ENCFF395KZG bigBed narrowPeak peaks ENCSR000BLI ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F6-human ENCAB000AFW DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF373HDQ 13198950 ENCODE Processing Pipeline ce6b88b82ebb91a420b5d28cea0f3c31 https://www.encodeproject.org/files/ENCFF395KZG/@@download/ENCFF395KZG.bigBed hg19 released control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample poor library complexity, insufficient read depth, severe bottlenecking ENCFF142VQA bed narrowPeak conservative idr thresholded peaks ENCSR000BLI ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F6-human ENCAB000AFW DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF001TDO, ENCFF072IAO, ENCFF318UXE, ENCFF373HDQ 333853 ENCODE Processing Pipeline 81c080e63ed8d6937712958f93ca5587 https://www.encodeproject.org/files/ENCFF142VQA/@@download/ENCFF142VQA.bed.gz hg19 released control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample poor library complexity, insufficient read depth, severe bottlenecking ENCFF116HDD bigWig fold change over control ENCSR000BLI ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F6-human ENCAB000AFW DNA see document see document False 2011-07-18 ENCODE 2 ENCFF585PFH, ENCFF620AHU 182892065 ENCODE Processing Pipeline 776c3779144df0e767117bdd9f39d20a https://www.encodeproject.org/files/ENCFF116HDD/@@download/ENCFF116HDD.bigWig hg19 released control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample poor library complexity, insufficient read depth, severe bottlenecking ENCFF123OID bigWig fold change over control ENCSR000BLI ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F6-human ENCAB000AFW DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF032EXY, ENCFF585PFH, ENCFF620AHU, ENCFF701KUD 372560758 ENCODE Processing Pipeline 663d377babba2169e0c4593289866751 https://www.encodeproject.org/files/ENCFF123OID/@@download/ENCFF123OID.bigWig hg19 released control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample poor library complexity, insufficient read depth, severe bottlenecking ENCFF015ZGW bigBed narrowPeak optimal idr thresholded peaks ENCSR000BLI ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F6-human ENCAB000AFW DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF917COW 1117257 ENCODE Processing Pipeline c847481cc26037ca9d6dc80d2426e644 https://www.encodeproject.org/files/ENCFF015ZGW/@@download/ENCFF015ZGW.bigBed hg19 released control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample poor library complexity, insufficient read depth, severe bottlenecking ENCFF241OVB bigWig signal p-value ENCSR000BLI ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F6-human ENCAB000AFW DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF032EXY, ENCFF585PFH, ENCFF620AHU, ENCFF701KUD 646197561 ENCODE Processing Pipeline abff8dc20789f49d4b1baebaaf4d9cc2 https://www.encodeproject.org/files/ENCFF241OVB/@@download/ENCFF241OVB.bigWig hg19 released control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample poor library complexity, insufficient read depth, severe bottlenecking ENCFF373HDQ bed narrowPeak peaks ENCSR000BLI ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F6-human ENCAB000AFW DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF032EXY, ENCFF585PFH, ENCFF620AHU, ENCFF701KUD 5408876 ENCODE Processing Pipeline 6c50803f86b68e6bc9eb027fe87e58d8 https://www.encodeproject.org/files/ENCFF373HDQ/@@download/ENCFF373HDQ.bed.gz hg19 released control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample poor library complexity, insufficient read depth, severe bottlenecking ENCFF388AYF bigBed narrowPeak peaks ENCSR000BLI ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F6-human ENCAB000AFW DNA see document see document False 2011-07-18 ENCODE 1 ENCFF318UXE 5824007 ENCODE Processing Pipeline 2a57e537834e0809d1b6ef7397dade25 https://www.encodeproject.org/files/ENCFF388AYF/@@download/ENCFF388AYF.bigBed hg19 released control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample poor library complexity, insufficient read depth, severe bottlenecking ENCFF002SKH bigBed narrowPeak peaks ENCSR000BLI ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F6-human ENCAB000AFW DNA see document see document False 2011-07-18 ENCODE 2 ENCFF072IAO 10183558 ENCODE Processing Pipeline 942c0728ffc98048937343f5ca440b36 https://www.encodeproject.org/files/ENCFF002SKH/@@download/ENCFF002SKH.bigBed hg19 released control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample poor library complexity, insufficient read depth, severe bottlenecking ENCFF917COW bed narrowPeak optimal idr thresholded peaks ENCSR000BLI ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F6-human ENCAB000AFW DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF001TDO, ENCFF072IAO, ENCFF318UXE, ENCFF373HDQ 534776 ENCODE Processing Pipeline 50091b97c0b4ff0828db52d7241d577e https://www.encodeproject.org/files/ENCFF917COW/@@download/ENCFF917COW.bed.gz hg19 released control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample poor library complexity, insufficient read depth, severe bottlenecking ENCFF318UXE bed narrowPeak peaks ENCSR000BLI ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F6-human ENCAB000AFW DNA see document see document False 2011-07-18 ENCODE 1 ENCFF032EXY, ENCFF701KUD 2363535 ENCODE Processing Pipeline adc1ffb997c20bbb67d594a28cededba https://www.encodeproject.org/files/ENCFF318UXE/@@download/ENCFF318UXE.bed.gz hg19 released control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample poor library complexity, insufficient read depth, severe bottlenecking ENCFF574SLM bigBed narrowPeak conservative idr thresholded peaks ENCSR000BLI ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F6-human ENCAB000AFW DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF142VQA 630249 ENCODE Processing Pipeline b06556a3313f1d13de0c48521ad336c4 https://www.encodeproject.org/files/ENCFF574SLM/@@download/ENCFF574SLM.bigBed hg19 released control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample poor library complexity, insufficient read depth, severe bottlenecking ENCFF000PZJ bam alignments ENCSR000BMD ChIP-seq EFO:0002067 K562 cell line Homo sapiens ELF1-human ENCAB000AGA DNA see document see document False 2011-07-18 ENCODE 1 ENCFF000PZV 432779940 Richard Myers, HAIB 4b3bfc98f1cb4281475f256442454c3d https://www.encodeproject.org/files/ENCFF000PZJ/@@download/ENCFF000PZJ.bam hg19 archived control low read depth, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample insufficient replicate concordance, poor library complexity, severe bottlenecking extremely low read depth ENCFF000PZL bigBed broadPeak peaks ENCSR000BMD ChIP-seq EFO:0002067 K562 cell line Homo sapiens ELF1-human ENCAB000AGA DNA see document see document False 2011-07-18 ENCODE 1 1 ENCFF001UJT 569845 Richard Myers, HAIB 5d43928af48252d4edbd32a8347f4e9d https://www.encodeproject.org/files/ENCFF000PZL/@@download/ENCFF000PZL.bigBed hg19 archived control low read depth, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample insufficient replicate concordance, poor library complexity, severe bottlenecking extremely low read depth ENCFF000PZM bam alignments ENCSR000BMD ChIP-seq EFO:0002067 K562 cell line Homo sapiens ELF1-human ENCAB000AGA DNA see document see document False 2011-07-18 ENCODE 2 ENCFF000PZY 1076704850 Richard Myers, HAIB 6f0499d31a3f646b08bab254754a8755 https://www.encodeproject.org/files/ENCFF000PZM/@@download/ENCFF000PZM.bam hg19 archived control low read depth, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample insufficient replicate concordance, poor library complexity, severe bottlenecking extremely low read depth ENCFF000PZN bigBed broadPeak peaks ENCSR000BMD ChIP-seq EFO:0002067 K562 cell line Homo sapiens ELF1-human ENCAB000AGA DNA see document see document False 2011-07-18 ENCODE 2 1 ENCFF001UJU 883280 Richard Myers, HAIB f3b9e6ee482a6b5908b2fc92c9ab3f89 https://www.encodeproject.org/files/ENCFF000PZN/@@download/ENCFF000PZN.bigBed hg19 archived control low read depth, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample insufficient replicate concordance, poor library complexity, severe bottlenecking extremely low read depth ENCFF000PZO bigWig raw signal ENCSR000BMD ChIP-seq EFO:0002067 K562 cell line Homo sapiens ELF1-human ENCAB000AGA DNA see document see document False 2011-07-18 ENCODE 1 1 19533657 Richard Myers, HAIB c71ba57618686aa1c314a94dc44a54e4 https://www.encodeproject.org/files/ENCFF000PZO/@@download/ENCFF000PZO.bigWig hg19 archived control low read depth, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample, missing derived_from insufficient replicate concordance, poor library complexity, severe bottlenecking extremely low read depth ENCFF000PZQ bigWig raw signal ENCSR000BMD ChIP-seq EFO:0002067 K562 cell line Homo sapiens ELF1-human ENCAB000AGA DNA see document see document False 2011-07-18 ENCODE 2 1 35479114 Richard Myers, HAIB 5e8431eaf9055ce965b83fd4e2f912c0 https://www.encodeproject.org/files/ENCFF000PZQ/@@download/ENCFF000PZQ.bigWig hg19 archived control low read depth, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample, missing derived_from insufficient replicate concordance, poor library complexity, severe bottlenecking extremely low read depth ENCFF000PZV fastq reads ENCSR000BMD ChIP-seq EFO:0002067 K562 cell line Homo sapiens ELF1-human ENCAB000AGA DNA see document see document False 2011-07-18 ENCODE 1 1 36 single-ended 494929517 Richard Myers, HAIB d09692ac6acf1416cc43e5ef452e0223 https://www.encodeproject.org/files/ENCFF000PZV/@@download/ENCFF000PZV.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000QET/ released control low read depth, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample insufficient replicate concordance, poor library complexity, severe bottlenecking extremely low read depth ENCFF000PZY fastq reads ENCSR000BMD ChIP-seq EFO:0002067 K562 cell line Homo sapiens ELF1-human ENCAB000AGA DNA see document see document False 2011-07-18 ENCODE 2 1 36 single-ended 1026344517 Richard Myers, HAIB 937f6244ae245604b7e3098cf3ee6665 https://www.encodeproject.org/files/ENCFF000PZY/@@download/ENCFF000PZY.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000QET/ released control low read depth, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample insufficient replicate concordance, poor library complexity, severe bottlenecking extremely low read depth ENCFF001UJT bed broadPeak peaks ENCSR000BMD ChIP-seq EFO:0002067 K562 cell line Homo sapiens ELF1-human ENCAB000AGA DNA see document see document False 2011-07-18 ENCODE 1 1 346418 Richard Myers, HAIB 38b1460bc8bbad5ee52956d4e78c6aba https://www.encodeproject.org/files/ENCFF001UJT/@@download/ENCFF001UJT.bed.gz hg19 archived control low read depth, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample, missing derived_from insufficient replicate concordance, poor library complexity, severe bottlenecking extremely low read depth ENCFF001UJU bed broadPeak peaks ENCSR000BMD ChIP-seq EFO:0002067 K562 cell line Homo sapiens ELF1-human ENCAB000AGA DNA see document see document False 2011-07-18 ENCODE 2 1 606633 Richard Myers, HAIB d954c79cc03fe81ab436de905d2a2818 https://www.encodeproject.org/files/ENCFF001UJU/@@download/ENCFF001UJU.bed.gz hg19 archived control low read depth, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample, missing derived_from insufficient replicate concordance, poor library complexity, severe bottlenecking extremely low read depth ENCFF002CLW bed narrowPeak optimal idr thresholded peaks ENCSR000BMD ChIP-seq EFO:0002067 K562 cell line Homo sapiens ELF1-human ENCAB000AGA DNA see document see document False 2011-07-18 ENCODE 547340 ENCODE Consortium Analysis Working Group 7f45cf21d10df1bd05cc423854e7a79f https://www.encodeproject.org/files/ENCFF002CLW/@@download/ENCFF002CLW.bed.gz hg19 archived control low read depth, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample, missing derived_from insufficient replicate concordance, poor library complexity, severe bottlenecking extremely low read depth ENCFF523DQU bigBed narrowPeak optimal idr thresholded peaks ENCSR000BMD ChIP-seq EFO:0002067 K562 cell line Homo sapiens ELF1-human ENCAB000AGA DNA see document see document False 2011-07-18 ENCODE ENCFF002CLW 1179500 ENCODE Consortium 459542967cf3754f033c4964f792decf https://www.encodeproject.org/files/ENCFF523DQU/@@download/ENCFF523DQU.bigBed hg19 archived control low read depth, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample insufficient replicate concordance, poor library complexity, severe bottlenecking extremely low read depth ENCFF331TRC bam alignments ENCSR000BMD ChIP-seq EFO:0002067 K562 cell line Homo sapiens ELF1-human ENCAB000AGA DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000PZV, ENCFF643CGH 189715385 ENCODE Processing Pipeline 7a7b384e5a57335211f6b39bd28a8b8b https://www.encodeproject.org/files/ENCFF331TRC/@@download/ENCFF331TRC.bam GRCh38 released control low read depth, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample insufficient replicate concordance, poor library complexity, severe bottlenecking extremely low read depth ENCFF236BRO bam unfiltered alignments ENCSR000BMD ChIP-seq EFO:0002067 K562 cell line Homo sapiens ELF1-human ENCAB000AGA DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000PZV, ENCFF643CGH 563509802 ENCODE Processing Pipeline cb51747847cf9f59f35b28effac2a13e https://www.encodeproject.org/files/ENCFF236BRO/@@download/ENCFF236BRO.bam GRCh38 released control low read depth, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample insufficient replicate concordance, poor library complexity, severe bottlenecking extremely low read depth ENCFF174XBV bam unfiltered alignments ENCSR000BMD ChIP-seq EFO:0002067 K562 cell line Homo sapiens ELF1-human ENCAB000AGA DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000PZY, ENCFF643CGH 1324290862 ENCODE Processing Pipeline cc5b8b9c0000a55124ffc0cb7afdd731 https://www.encodeproject.org/files/ENCFF174XBV/@@download/ENCFF174XBV.bam GRCh38 released control low read depth, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample insufficient replicate concordance, poor library complexity, severe bottlenecking extremely low read depth ENCFF535PLW bam alignments ENCSR000BMD ChIP-seq EFO:0002067 K562 cell line Homo sapiens ELF1-human ENCAB000AGA DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000PZY, ENCFF643CGH 767172471 ENCODE Processing Pipeline 298e40432ceeb43681e43e6c31aa40d2 https://www.encodeproject.org/files/ENCFF535PLW/@@download/ENCFF535PLW.bam GRCh38 released control low read depth, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample insufficient replicate concordance, poor library complexity, severe bottlenecking extremely low read depth ENCFF622LEW bam unfiltered alignments ENCSR000BMD ChIP-seq EFO:0002067 K562 cell line Homo sapiens ELF1-human ENCAB000AGA DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000PZV, ENCFF807MUK 562418712 ENCODE Processing Pipeline bac1ff8780d8d1caf26e34f05621e81e https://www.encodeproject.org/files/ENCFF622LEW/@@download/ENCFF622LEW.bam hg19 released control low read depth, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample insufficient replicate concordance, poor library complexity, severe bottlenecking extremely low read depth ENCFF649QHV bam alignments ENCSR000BMD ChIP-seq EFO:0002067 K562 cell line Homo sapiens ELF1-human ENCAB000AGA DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000PZV, ENCFF807MUK 189978068 ENCODE Processing Pipeline 3a5e6de3bdedba129a7a9623f3a29aad https://www.encodeproject.org/files/ENCFF649QHV/@@download/ENCFF649QHV.bam hg19 released control low read depth, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample insufficient replicate concordance, poor library complexity, severe bottlenecking extremely low read depth ENCFF400SJA bam alignments ENCSR000BMD ChIP-seq EFO:0002067 K562 cell line Homo sapiens ELF1-human ENCAB000AGA DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000PZY, ENCFF807MUK 767732324 ENCODE Processing Pipeline 62bd020b3f854ed98a5598c63c1f35a2 https://www.encodeproject.org/files/ENCFF400SJA/@@download/ENCFF400SJA.bam hg19 released control low read depth, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample insufficient replicate concordance, poor library complexity, severe bottlenecking extremely low read depth ENCFF591FHN bam unfiltered alignments ENCSR000BMD ChIP-seq EFO:0002067 K562 cell line Homo sapiens ELF1-human ENCAB000AGA DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000PZY, ENCFF807MUK 1321017359 ENCODE Processing Pipeline 2ad101fb274e4591871122e9026abf36 https://www.encodeproject.org/files/ENCFF591FHN/@@download/ENCFF591FHN.bam hg19 released control low read depth, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample insufficient replicate concordance, poor library complexity, severe bottlenecking extremely low read depth ENCFF218HJX bigWig signal p-value ENCSR000BMD ChIP-seq EFO:0002067 K562 cell line Homo sapiens ELF1-human ENCAB000AGA DNA see document see document False 2011-07-18 ENCODE 1 ENCFF331TRC, ENCFF913HVS 287242249 ENCODE Processing Pipeline e2a5801f0fdeaef6d944511cae5d4fff https://www.encodeproject.org/files/ENCFF218HJX/@@download/ENCFF218HJX.bigWig GRCh38 released control low read depth, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample insufficient replicate concordance, poor library complexity, severe bottlenecking extremely low read depth ENCFF223ZWR bigWig signal p-value ENCSR000BMD ChIP-seq EFO:0002067 K562 cell line Homo sapiens ELF1-human ENCAB000AGA DNA see document see document False 2011-07-18 ENCODE 2 ENCFF535PLW, ENCFF913HVS 439172363 ENCODE Processing Pipeline 30e3fadce087ef8924a2d13200e5e2ae https://www.encodeproject.org/files/ENCFF223ZWR/@@download/ENCFF223ZWR.bigWig GRCh38 released control low read depth, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample insufficient replicate concordance, poor library complexity, severe bottlenecking extremely low read depth ENCFF401ULN bigWig signal p-value ENCSR000BMD ChIP-seq EFO:0002067 K562 cell line Homo sapiens ELF1-human ENCAB000AGA DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF331TRC, ENCFF535PLW, ENCFF913HVS 463754730 ENCODE Processing Pipeline cccb5623f964f89b5a57c61a65b076ec https://www.encodeproject.org/files/ENCFF401ULN/@@download/ENCFF401ULN.bigWig GRCh38 released control low read depth, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample insufficient replicate concordance, poor library complexity, severe bottlenecking extremely low read depth ENCFF992ARM bigWig fold change over control ENCSR000BMD ChIP-seq EFO:0002067 K562 cell line Homo sapiens ELF1-human ENCAB000AGA DNA see document see document False 2011-07-18 ENCODE 1 ENCFF331TRC, ENCFF913HVS 99818461 ENCODE Processing Pipeline df619c3765cbd87752e83a98df7a6efd https://www.encodeproject.org/files/ENCFF992ARM/@@download/ENCFF992ARM.bigWig GRCh38 released control low read depth, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample insufficient replicate concordance, poor library complexity, severe bottlenecking extremely low read depth ENCFF070LSE bigWig fold change over control ENCSR000BMD ChIP-seq EFO:0002067 K562 cell line Homo sapiens ELF1-human ENCAB000AGA DNA see document see document False 2011-07-18 ENCODE 2 ENCFF535PLW, ENCFF913HVS 342033978 ENCODE Processing Pipeline 70809d95e3ae9dd7ee19a37b68a5ddd5 https://www.encodeproject.org/files/ENCFF070LSE/@@download/ENCFF070LSE.bigWig GRCh38 released control low read depth, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample insufficient replicate concordance, poor library complexity, severe bottlenecking extremely low read depth ENCFF576IQY bigWig fold change over control ENCSR000BMD ChIP-seq EFO:0002067 K562 cell line Homo sapiens ELF1-human ENCAB000AGA DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF331TRC, ENCFF535PLW, ENCFF913HVS 407166590 ENCODE Processing Pipeline 689734ddfaf772f6ff6fd4f9f96ef98e https://www.encodeproject.org/files/ENCFF576IQY/@@download/ENCFF576IQY.bigWig GRCh38 released control low read depth, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample insufficient replicate concordance, poor library complexity, severe bottlenecking extremely low read depth ENCFF914RGQ bed narrowPeak peaks ENCSR000BMD ChIP-seq EFO:0002067 K562 cell line Homo sapiens ELF1-human ENCAB000AGA DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF331TRC, ENCFF535PLW, ENCFF913HVS 5484339 ENCODE Processing Pipeline a14031581d0788f2eda7584f5fea43c6 https://www.encodeproject.org/files/ENCFF914RGQ/@@download/ENCFF914RGQ.bed.gz GRCh38 released control low read depth, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample insufficient replicate concordance, poor library complexity, severe bottlenecking extremely low read depth ENCFF617WYS bed narrowPeak conservative idr thresholded peaks ENCSR000BMD ChIP-seq EFO:0002067 K562 cell line Homo sapiens ELF1-human ENCAB000AGA DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF373RYW, ENCFF419RSJ, ENCFF914RGQ, ENCFF940ZYR 276128 ENCODE Processing Pipeline 22af1e45992aaabb040e3d227c4300d0 https://www.encodeproject.org/files/ENCFF617WYS/@@download/ENCFF617WYS.bed.gz GRCh38 released control low read depth, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample insufficient replicate concordance, poor library complexity, severe bottlenecking extremely low read depth ENCFF463GCH bed narrowPeak optimal idr thresholded peaks ENCSR000BMD ChIP-seq EFO:0002067 K562 cell line Homo sapiens ELF1-human ENCAB000AGA DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF373RYW, ENCFF419RSJ, ENCFF914RGQ, ENCFF940ZYR 569548 ENCODE Processing Pipeline 425ae520c266a3da61db4b1767c41189 https://www.encodeproject.org/files/ENCFF463GCH/@@download/ENCFF463GCH.bed.gz GRCh38 released control low read depth, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample insufficient replicate concordance, poor library complexity, severe bottlenecking extremely low read depth ENCFF293DZJ bigBed narrowPeak optimal idr thresholded peaks ENCSR000BMD ChIP-seq EFO:0002067 K562 cell line Homo sapiens ELF1-human ENCAB000AGA DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF463GCH 1183034 ENCODE Processing Pipeline f87fe26fe636e497eecaf1e9675b1c5c https://www.encodeproject.org/files/ENCFF293DZJ/@@download/ENCFF293DZJ.bigBed GRCh38 released control low read depth, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample insufficient replicate concordance, poor library complexity, severe bottlenecking extremely low read depth ENCFF373RYW bed narrowPeak peaks ENCSR000BMD ChIP-seq EFO:0002067 K562 cell line Homo sapiens ELF1-human ENCAB000AGA DNA see document see document False 2011-07-18 ENCODE 1 ENCFF331TRC, ENCFF913HVS 1718491 ENCODE Processing Pipeline 2ea02304fb23b1579258f43d988f1954 https://www.encodeproject.org/files/ENCFF373RYW/@@download/ENCFF373RYW.bed.gz GRCh38 released control low read depth, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample insufficient replicate concordance, poor library complexity, severe bottlenecking extremely low read depth ENCFF940ZYR bed narrowPeak peaks ENCSR000BMD ChIP-seq EFO:0002067 K562 cell line Homo sapiens ELF1-human ENCAB000AGA DNA see document see document False 2011-07-18 ENCODE 2 ENCFF535PLW, ENCFF913HVS 5090410 ENCODE Processing Pipeline af49958ede7ca18fdc1a0dfe0afdcbbc https://www.encodeproject.org/files/ENCFF940ZYR/@@download/ENCFF940ZYR.bed.gz GRCh38 released control low read depth, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample insufficient replicate concordance, poor library complexity, severe bottlenecking extremely low read depth ENCFF610QMV bigBed narrowPeak peaks ENCSR000BMD ChIP-seq EFO:0002067 K562 cell line Homo sapiens ELF1-human ENCAB000AGA DNA see document see document False 2011-07-18 ENCODE 1 ENCFF373RYW 3969005 ENCODE Processing Pipeline f7bea53f9bdd0de20d3c6ff84d7ffe07 https://www.encodeproject.org/files/ENCFF610QMV/@@download/ENCFF610QMV.bigBed GRCh38 released control low read depth, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample insufficient replicate concordance, poor library complexity, severe bottlenecking extremely low read depth ENCFF263XHO bigBed narrowPeak peaks ENCSR000BMD ChIP-seq EFO:0002067 K562 cell line Homo sapiens ELF1-human ENCAB000AGA DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF914RGQ 13279552 ENCODE Processing Pipeline f06ef26a5f3fa37e89832b626e365d15 https://www.encodeproject.org/files/ENCFF263XHO/@@download/ENCFF263XHO.bigBed GRCh38 released control low read depth, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample insufficient replicate concordance, poor library complexity, severe bottlenecking extremely low read depth ENCFF699AIM bigBed narrowPeak peaks ENCSR000BMD ChIP-seq EFO:0002067 K562 cell line Homo sapiens ELF1-human ENCAB000AGA DNA see document see document False 2011-07-18 ENCODE 2 ENCFF940ZYR 10893089 ENCODE Processing Pipeline 30b0e7e67a6d2d044b0a67acc2445d70 https://www.encodeproject.org/files/ENCFF699AIM/@@download/ENCFF699AIM.bigBed GRCh38 released control low read depth, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample insufficient replicate concordance, poor library complexity, severe bottlenecking extremely low read depth ENCFF419PLT bigBed narrowPeak conservative idr thresholded peaks ENCSR000BMD ChIP-seq EFO:0002067 K562 cell line Homo sapiens ELF1-human ENCAB000AGA DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF617WYS 568647 ENCODE Processing Pipeline 7b18faaa29c73510b2c20861549a630f https://www.encodeproject.org/files/ENCFF419PLT/@@download/ENCFF419PLT.bigBed GRCh38 released control low read depth, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample insufficient replicate concordance, poor library complexity, severe bottlenecking extremely low read depth ENCFF445HQE bed narrowPeak peaks ENCSR000BMD ChIP-seq EFO:0002067 K562 cell line Homo sapiens ELF1-human ENCAB000AGA DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF400SJA, ENCFF649QHV, ENCFF701KUD 5484780 ENCODE Processing Pipeline 9d9c8373f8ae66c59eb68f0976483a33 https://www.encodeproject.org/files/ENCFF445HQE/@@download/ENCFF445HQE.bed.gz hg19 released control low read depth, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample insufficient replicate concordance, poor library complexity, severe bottlenecking extremely low read depth ENCFF730UGA bigBed narrowPeak peaks ENCSR000BMD ChIP-seq EFO:0002067 K562 cell line Homo sapiens ELF1-human ENCAB000AGA DNA see document see document False 2011-07-18 ENCODE 1 ENCFF875HXY 3803312 ENCODE Processing Pipeline 510d6a448c8334b29bf2f5bbc9972cb2 https://www.encodeproject.org/files/ENCFF730UGA/@@download/ENCFF730UGA.bigBed hg19 released control low read depth, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample insufficient replicate concordance, poor library complexity, severe bottlenecking extremely low read depth ENCFF469QYZ bigWig fold change over control ENCSR000BMD ChIP-seq EFO:0002067 K562 cell line Homo sapiens ELF1-human ENCAB000AGA DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF400SJA, ENCFF649QHV, ENCFF701KUD 407858280 ENCODE Processing Pipeline 317ef5dc1971ba33ad5a1f8f71c61b93 https://www.encodeproject.org/files/ENCFF469QYZ/@@download/ENCFF469QYZ.bigWig hg19 released control low read depth, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample insufficient replicate concordance, poor library complexity, severe bottlenecking extremely low read depth ENCFF284PFR bigWig fold change over control ENCSR000BMD ChIP-seq EFO:0002067 K562 cell line Homo sapiens ELF1-human ENCAB000AGA DNA see document see document False 2011-07-18 ENCODE 1 ENCFF649QHV, ENCFF701KUD 101629469 ENCODE Processing Pipeline 12d1a4606916ef85d78bb355b0bc65ef https://www.encodeproject.org/files/ENCFF284PFR/@@download/ENCFF284PFR.bigWig hg19 released control low read depth, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample insufficient replicate concordance, poor library complexity, severe bottlenecking extremely low read depth ENCFF800OXS bigWig signal p-value ENCSR000BMD ChIP-seq EFO:0002067 K562 cell line Homo sapiens ELF1-human ENCAB000AGA DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF400SJA, ENCFF649QHV, ENCFF701KUD 464101180 ENCODE Processing Pipeline ec1f2e1518af7db5b689c523d053f64c https://www.encodeproject.org/files/ENCFF800OXS/@@download/ENCFF800OXS.bigWig hg19 released control low read depth, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample insufficient replicate concordance, poor library complexity, severe bottlenecking extremely low read depth ENCFF484YEL bigWig fold change over control ENCSR000BMD ChIP-seq EFO:0002067 K562 cell line Homo sapiens ELF1-human ENCAB000AGA DNA see document see document False 2011-07-18 ENCODE 2 ENCFF400SJA, ENCFF701KUD 339155647 ENCODE Processing Pipeline d2f692e4aeaac054854ccf7c86026ac5 https://www.encodeproject.org/files/ENCFF484YEL/@@download/ENCFF484YEL.bigWig hg19 released control low read depth, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample insufficient replicate concordance, poor library complexity, severe bottlenecking extremely low read depth ENCFF102AET bigBed narrowPeak peaks ENCSR000BMD ChIP-seq EFO:0002067 K562 cell line Homo sapiens ELF1-human ENCAB000AGA DNA see document see document False 2011-07-18 ENCODE 2 ENCFF634DSI 10888176 ENCODE Processing Pipeline 78e5f9ee752e0d375d3ce6b8c3d6ec77 https://www.encodeproject.org/files/ENCFF102AET/@@download/ENCFF102AET.bigBed hg19 released control low read depth, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample insufficient replicate concordance, poor library complexity, severe bottlenecking extremely low read depth ENCFF603TCJ bigWig signal p-value ENCSR000BMD ChIP-seq EFO:0002067 K562 cell line Homo sapiens ELF1-human ENCAB000AGA DNA see document see document False 2011-07-18 ENCODE 1 ENCFF649QHV, ENCFF701KUD 293127287 ENCODE Processing Pipeline 1f5745e08b5681303ddcf83b1dd6781f https://www.encodeproject.org/files/ENCFF603TCJ/@@download/ENCFF603TCJ.bigWig hg19 released control low read depth, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample insufficient replicate concordance, poor library complexity, severe bottlenecking extremely low read depth ENCFF634DSI bed narrowPeak peaks ENCSR000BMD ChIP-seq EFO:0002067 K562 cell line Homo sapiens ELF1-human ENCAB000AGA DNA see document see document False 2011-07-18 ENCODE 2 ENCFF400SJA, ENCFF701KUD 5092351 ENCODE Processing Pipeline 312cb573a1d3431bd073463f0d75d458 https://www.encodeproject.org/files/ENCFF634DSI/@@download/ENCFF634DSI.bed.gz hg19 released control low read depth, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample insufficient replicate concordance, poor library complexity, severe bottlenecking extremely low read depth ENCFF368HEW bed narrowPeak conservative idr thresholded peaks ENCSR000BMD ChIP-seq EFO:0002067 K562 cell line Homo sapiens ELF1-human ENCAB000AGA DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF001TDO, ENCFF445HQE, ENCFF634DSI, ENCFF875HXY 275080 ENCODE Processing Pipeline c59322150fab933e3bb751e22e3afb6c https://www.encodeproject.org/files/ENCFF368HEW/@@download/ENCFF368HEW.bed.gz hg19 released control low read depth, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample insufficient replicate concordance, poor library complexity, severe bottlenecking extremely low read depth ENCFF564WEB bed narrowPeak optimal idr thresholded peaks ENCSR000BMD ChIP-seq EFO:0002067 K562 cell line Homo sapiens ELF1-human ENCAB000AGA DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF001TDO, ENCFF445HQE, ENCFF634DSI, ENCFF875HXY 561894 ENCODE Processing Pipeline eacf14da9a574f49fd8a632a87be3b4d https://www.encodeproject.org/files/ENCFF564WEB/@@download/ENCFF564WEB.bed.gz hg19 released control low read depth, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample insufficient replicate concordance, poor library complexity, severe bottlenecking extremely low read depth ENCFF430EMT bigWig signal p-value ENCSR000BMD ChIP-seq EFO:0002067 K562 cell line Homo sapiens ELF1-human ENCAB000AGA DNA see document see document False 2011-07-18 ENCODE 2 ENCFF400SJA, ENCFF701KUD 508643399 ENCODE Processing Pipeline 91ffb3bd841a549e8c56314a3302972c https://www.encodeproject.org/files/ENCFF430EMT/@@download/ENCFF430EMT.bigWig hg19 released control low read depth, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample insufficient replicate concordance, poor library complexity, severe bottlenecking extremely low read depth ENCFF875HXY bed narrowPeak peaks ENCSR000BMD ChIP-seq EFO:0002067 K562 cell line Homo sapiens ELF1-human ENCAB000AGA DNA see document see document False 2011-07-18 ENCODE 1 ENCFF649QHV, ENCFF701KUD 1602818 ENCODE Processing Pipeline 81ba7eff0351c58785226e55900ea318 https://www.encodeproject.org/files/ENCFF875HXY/@@download/ENCFF875HXY.bed.gz hg19 released control low read depth, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample insufficient replicate concordance, poor library complexity, severe bottlenecking extremely low read depth ENCFF459QOD bigBed narrowPeak peaks ENCSR000BMD ChIP-seq EFO:0002067 K562 cell line Homo sapiens ELF1-human ENCAB000AGA DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF445HQE 13283173 ENCODE Processing Pipeline a53b84031cd1c306214e4ddb36ab54d2 https://www.encodeproject.org/files/ENCFF459QOD/@@download/ENCFF459QOD.bigBed hg19 released control low read depth, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample insufficient replicate concordance, poor library complexity, severe bottlenecking extremely low read depth ENCFF894YXD bigBed narrowPeak optimal idr thresholded peaks ENCSR000BMD ChIP-seq EFO:0002067 K562 cell line Homo sapiens ELF1-human ENCAB000AGA DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF564WEB 1174187 ENCODE Processing Pipeline e18916cb7992cb933b0e66b3c831ca31 https://www.encodeproject.org/files/ENCFF894YXD/@@download/ENCFF894YXD.bigBed hg19 released control low read depth, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample insufficient replicate concordance, poor library complexity, severe bottlenecking extremely low read depth ENCFF746BOB bigBed narrowPeak conservative idr thresholded peaks ENCSR000BMD ChIP-seq EFO:0002067 K562 cell line Homo sapiens ELF1-human ENCAB000AGA DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF368HEW 572681 ENCODE Processing Pipeline 86eec46a84a0fabcb8b153da6bf2a154 https://www.encodeproject.org/files/ENCFF746BOB/@@download/ENCFF746BOB.bigBed hg19 released control low read depth, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample insufficient replicate concordance, poor library complexity, severe bottlenecking extremely low read depth ENCFF680UDO bam unfiltered alignments ENCSR628APV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM5-human ENCAB690HQC DNA False 2018-01-26 ENCODE 2 100 ENCFF807MUK, ENCFF965IPJ, ENCFF967WPN 5522084928 ENCODE Processing Pipeline 9a8ec69bfee0f9e7c5be3f52db4ea3f2 https://www.encodeproject.org/files/ENCFF680UDO/@@download/ENCFF680UDO.bam hg19 released borderline replicate concordance experiment not submitted to GEO partially characterized antibody ENCFF658YKY bam unfiltered alignments ENCSR628APV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM5-human ENCAB690HQC DNA False 2018-01-26 ENCODE 1 100 ENCFF380XLB, ENCFF611GML, ENCFF807MUK 5324607857 ENCODE Processing Pipeline e33805adea349c41805f636a2bc4c26d https://www.encodeproject.org/files/ENCFF658YKY/@@download/ENCFF658YKY.bam hg19 released borderline replicate concordance experiment not submitted to GEO partially characterized antibody ENCFF380XLB fastq reads ENCSR628APV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM5-human ENCAB690HQC DNA False 2018-01-26 ENCODE 1 1 100 paired-ended 2 ENCFF611GML 2484139690 Michael Snyder, Stanford fd25c0c34f08c1e2ddf6781ccca22cb7 https://www.encodeproject.org/files/ENCFF380XLB/@@download/ENCFF380XLB.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFH/ released borderline replicate concordance experiment not submitted to GEO partially characterized antibody ENCFF611GML fastq reads ENCSR628APV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM5-human ENCAB690HQC DNA False 2018-01-26 ENCODE 1 1 100 paired-ended 1 ENCFF380XLB 2358016055 Michael Snyder, Stanford 3fc2cbf911eb36131c7bc91dded3db53 https://www.encodeproject.org/files/ENCFF611GML/@@download/ENCFF611GML.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFF/ released borderline replicate concordance experiment not submitted to GEO partially characterized antibody ENCFF965IPJ fastq reads ENCSR628APV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM5-human ENCAB690HQC DNA False 2018-01-26 ENCODE 2 1 100 paired-ended 1 ENCFF967WPN 2450542646 Michael Snyder, Stanford bee00aa852069f2de485712a3b17d589 https://www.encodeproject.org/files/ENCFF965IPJ/@@download/ENCFF965IPJ.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFD/ released borderline replicate concordance experiment not submitted to GEO partially characterized antibody ENCFF967WPN fastq reads ENCSR628APV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM5-human ENCAB690HQC DNA False 2018-01-26 ENCODE 2 1 100 paired-ended 2 ENCFF965IPJ 2565477163 Michael Snyder, Stanford bf35bfdb71662c21f36b9b7671b4b8da https://www.encodeproject.org/files/ENCFF967WPN/@@download/ENCFF967WPN.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFA/ released borderline replicate concordance experiment not submitted to GEO partially characterized antibody ENCFF183PSA bam alignments ENCSR628APV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM5-human ENCAB690HQC DNA False 2018-01-26 ENCODE 1 100 ENCFF380XLB, ENCFF611GML, ENCFF807MUK 4155775253 ENCODE Processing Pipeline 3d0b5098dd2c38e0622185a9ea36e0cb https://www.encodeproject.org/files/ENCFF183PSA/@@download/ENCFF183PSA.bam hg19 released borderline replicate concordance experiment not submitted to GEO partially characterized antibody ENCFF206LXZ bam alignments ENCSR628APV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM5-human ENCAB690HQC DNA False 2018-01-26 ENCODE 2 100 ENCFF807MUK, ENCFF965IPJ, ENCFF967WPN 4451130063 ENCODE Processing Pipeline 90e491013c28d1efbec7f37b1fe82f64 https://www.encodeproject.org/files/ENCFF206LXZ/@@download/ENCFF206LXZ.bam hg19 released borderline replicate concordance experiment not submitted to GEO partially characterized antibody ENCFF015SWZ bigWig signal p-value ENCSR628APV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM5-human ENCAB690HQC DNA False 2018-01-26 ENCODE 1 ENCFF183PSA, ENCFF581ZJL 945109356 ENCODE Processing Pipeline 6c42969eb0bc98a3f31d3acc305b1c50 https://www.encodeproject.org/files/ENCFF015SWZ/@@download/ENCFF015SWZ.bigWig hg19 released borderline replicate concordance experiment not submitted to GEO partially characterized antibody ENCFF075AUM bigWig signal p-value ENCSR628APV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM5-human ENCAB690HQC DNA False 2018-01-26 ENCODE 2 ENCFF051LWI, ENCFF206LXZ 1004470609 ENCODE Processing Pipeline 3edd1560516483f355faf3f52ebffff6 https://www.encodeproject.org/files/ENCFF075AUM/@@download/ENCFF075AUM.bigWig hg19 released borderline replicate concordance experiment not submitted to GEO partially characterized antibody ENCFF524OUT bigWig signal p-value ENCSR628APV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM5-human ENCAB690HQC DNA False 2018-01-26 ENCODE 1, 2 ENCFF051LWI, ENCFF183PSA, ENCFF206LXZ, ENCFF581ZJL 1621573991 ENCODE Processing Pipeline 7917bf785dad75c6251401f83ca4ea78 https://www.encodeproject.org/files/ENCFF524OUT/@@download/ENCFF524OUT.bigWig hg19 released borderline replicate concordance experiment not submitted to GEO partially characterized antibody ENCFF536LFC bigWig fold change over control ENCSR628APV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM5-human ENCAB690HQC DNA False 2018-01-26 ENCODE 1 ENCFF183PSA, ENCFF581ZJL 1112737080 ENCODE Processing Pipeline 5412525e02dca6039c4b16cc73034604 https://www.encodeproject.org/files/ENCFF536LFC/@@download/ENCFF536LFC.bigWig hg19 released borderline replicate concordance experiment not submitted to GEO partially characterized antibody ENCFF946NSC bigWig fold change over control ENCSR628APV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM5-human ENCAB690HQC DNA False 2018-01-26 ENCODE 2 ENCFF051LWI, ENCFF206LXZ 1107854091 ENCODE Processing Pipeline 93a75f98c4187db52b6c03d563db0cbf https://www.encodeproject.org/files/ENCFF946NSC/@@download/ENCFF946NSC.bigWig hg19 released borderline replicate concordance experiment not submitted to GEO partially characterized antibody ENCFF325IJT bigWig fold change over control ENCSR628APV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM5-human ENCAB690HQC DNA False 2018-01-26 ENCODE 1, 2 ENCFF051LWI, ENCFF183PSA, ENCFF206LXZ, ENCFF581ZJL 2077144716 ENCODE Processing Pipeline 94cb0a39ca0fb2be8625758b861696c2 https://www.encodeproject.org/files/ENCFF325IJT/@@download/ENCFF325IJT.bigWig hg19 released borderline replicate concordance experiment not submitted to GEO partially characterized antibody ENCFF984IHA bed narrowPeak peaks ENCSR628APV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM5-human ENCAB690HQC DNA False 2018-01-26 ENCODE 2 ENCFF051LWI, ENCFF206LXZ 6308318 ENCODE Processing Pipeline f4a16dafb784377abd1f6d7f181b7dd3 https://www.encodeproject.org/files/ENCFF984IHA/@@download/ENCFF984IHA.bed.gz hg19 released borderline replicate concordance experiment not submitted to GEO partially characterized antibody ENCFF875LKY bed narrowPeak peaks ENCSR628APV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM5-human ENCAB690HQC DNA False 2018-01-26 ENCODE 1 ENCFF183PSA, ENCFF581ZJL 6223542 ENCODE Processing Pipeline 9c4fad93bb6a7dabb0c176f1437295d4 https://www.encodeproject.org/files/ENCFF875LKY/@@download/ENCFF875LKY.bed.gz hg19 released borderline replicate concordance experiment not submitted to GEO partially characterized antibody ENCFF501SOY bed narrowPeak peaks ENCSR628APV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM5-human ENCAB690HQC DNA False 2018-01-26 ENCODE 1, 2 ENCFF051LWI, ENCFF183PSA, ENCFF206LXZ, ENCFF581ZJL 7141762 ENCODE Processing Pipeline ded77277a635e3730e5e1b4d8866d52f https://www.encodeproject.org/files/ENCFF501SOY/@@download/ENCFF501SOY.bed.gz hg19 released borderline replicate concordance experiment not submitted to GEO partially characterized antibody ENCFF563EXY bigBed narrowPeak peaks ENCSR628APV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM5-human ENCAB690HQC DNA False 2018-01-26 ENCODE 1 ENCFF875LKY 11076574 ENCODE Processing Pipeline 5caf9b094e2d5838f57e7144ffcc62be https://www.encodeproject.org/files/ENCFF563EXY/@@download/ENCFF563EXY.bigBed hg19 released borderline replicate concordance experiment not submitted to GEO partially characterized antibody ENCFF367TQT bigBed narrowPeak peaks ENCSR628APV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM5-human ENCAB690HQC DNA False 2018-01-26 ENCODE 2 ENCFF984IHA 11005864 ENCODE Processing Pipeline e3ac1e371b52ff480ceff6ba7b78b935 https://www.encodeproject.org/files/ENCFF367TQT/@@download/ENCFF367TQT.bigBed hg19 released borderline replicate concordance experiment not submitted to GEO partially characterized antibody ENCFF220WXP bigBed narrowPeak peaks ENCSR628APV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM5-human ENCAB690HQC DNA False 2018-01-26 ENCODE 1, 2 ENCFF501SOY 10884892 ENCODE Processing Pipeline 1da481119bc4c8db3ab2ede524965bd8 https://www.encodeproject.org/files/ENCFF220WXP/@@download/ENCFF220WXP.bigBed hg19 released borderline replicate concordance experiment not submitted to GEO partially characterized antibody ENCFF747VAX bed narrowPeak conservative idr thresholded peaks ENCSR628APV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM5-human ENCAB690HQC DNA False 2018-01-26 ENCODE 1, 2 ENCFF001TDO, ENCFF501SOY, ENCFF875LKY, ENCFF984IHA 15521 ENCODE Processing Pipeline 7562dce8f28e3274d2db48fe8dc82401 https://www.encodeproject.org/files/ENCFF747VAX/@@download/ENCFF747VAX.bed.gz hg19 released borderline replicate concordance experiment not submitted to GEO partially characterized antibody ENCFF413XXU bigBed narrowPeak conservative idr thresholded peaks ENCSR628APV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM5-human ENCAB690HQC DNA False 2018-01-26 ENCODE 1, 2 ENCFF747VAX 95952 ENCODE Processing Pipeline 65bfc1976f0d1f62db8d7701bef15972 https://www.encodeproject.org/files/ENCFF413XXU/@@download/ENCFF413XXU.bigBed hg19 released borderline replicate concordance experiment not submitted to GEO partially characterized antibody ENCFF920RYJ bed narrowPeak optimal idr thresholded peaks ENCSR628APV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM5-human ENCAB690HQC DNA False 2018-01-26 ENCODE 1, 2 ENCFF001TDO, ENCFF501SOY, ENCFF875LKY, ENCFF984IHA 33676 ENCODE Processing Pipeline ef297c364374a7c5d686706dc6ed6a25 https://www.encodeproject.org/files/ENCFF920RYJ/@@download/ENCFF920RYJ.bed.gz hg19 released borderline replicate concordance experiment not submitted to GEO partially characterized antibody ENCFF288TSU bigBed narrowPeak optimal idr thresholded peaks ENCSR628APV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM5-human ENCAB690HQC DNA False 2018-01-26 ENCODE 1, 2 ENCFF920RYJ 119019 ENCODE Processing Pipeline bd7805d2322ca70d40dfd19c4d1b0d62 https://www.encodeproject.org/files/ENCFF288TSU/@@download/ENCFF288TSU.bigBed hg19 released borderline replicate concordance experiment not submitted to GEO partially characterized antibody ENCFF059CYA bam unfiltered alignments ENCSR628APV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM5-human ENCAB690HQC DNA False 2018-01-26 ENCODE 2 100 ENCFF643CGH, ENCFF965IPJ, ENCFF967WPN 5528535417 ENCODE Processing Pipeline a39bf74dd9b6230fa515ce356e582a52 https://www.encodeproject.org/files/ENCFF059CYA/@@download/ENCFF059CYA.bam GRCh38 released borderline replicate concordance experiment not submitted to GEO partially characterized antibody ENCFF875FLT bam unfiltered alignments ENCSR628APV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM5-human ENCAB690HQC DNA False 2018-01-26 ENCODE 1 100 ENCFF380XLB, ENCFF611GML, ENCFF643CGH 5329278296 ENCODE Processing Pipeline 7841368d7aa9bba1d1ad23ab90dec165 https://www.encodeproject.org/files/ENCFF875FLT/@@download/ENCFF875FLT.bam GRCh38 released borderline replicate concordance experiment not submitted to GEO partially characterized antibody ENCFF749XIH bam alignments ENCSR628APV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM5-human ENCAB690HQC DNA False 2018-01-26 ENCODE 2 100 ENCFF643CGH, ENCFF965IPJ, ENCFF967WPN 4456139984 ENCODE Processing Pipeline e76dd878ff21c8258ecb91ef0db2e195 https://www.encodeproject.org/files/ENCFF749XIH/@@download/ENCFF749XIH.bam GRCh38 released borderline replicate concordance experiment not submitted to GEO partially characterized antibody ENCFF636FDE bam alignments ENCSR628APV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM5-human ENCAB690HQC DNA False 2018-01-26 ENCODE 1 100 ENCFF380XLB, ENCFF611GML, ENCFF643CGH 4160620960 ENCODE Processing Pipeline 32da6209b8b050a000467441cb67fadd https://www.encodeproject.org/files/ENCFF636FDE/@@download/ENCFF636FDE.bam GRCh38 released borderline replicate concordance experiment not submitted to GEO partially characterized antibody ENCFF502KSF bigWig signal p-value ENCSR628APV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM5-human ENCAB690HQC DNA False 2018-01-26 ENCODE 1 ENCFF636FDE, ENCFF910IKB 1191971891 ENCODE Processing Pipeline d8846c8cd0eb0677dca63d1b48af1774 https://www.encodeproject.org/files/ENCFF502KSF/@@download/ENCFF502KSF.bigWig GRCh38 released borderline replicate concordance experiment not submitted to GEO partially characterized antibody ENCFF292YTI bigWig signal p-value ENCSR628APV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM5-human ENCAB690HQC DNA False 2018-01-26 ENCODE 2 ENCFF227IZS, ENCFF749XIH 927137622 ENCODE Processing Pipeline 493d2634ae5a19ca0c59cea06e1fdcc0 https://www.encodeproject.org/files/ENCFF292YTI/@@download/ENCFF292YTI.bigWig GRCh38 released borderline replicate concordance experiment not submitted to GEO partially characterized antibody ENCFF670LCO bigWig signal p-value ENCSR628APV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM5-human ENCAB690HQC DNA False 2018-01-26 ENCODE 1, 2 ENCFF227IZS, ENCFF636FDE, ENCFF749XIH, ENCFF910IKB 1930388005 ENCODE Processing Pipeline c0349b1dbd2a260ccba52d112dcf00a4 https://www.encodeproject.org/files/ENCFF670LCO/@@download/ENCFF670LCO.bigWig GRCh38 released borderline replicate concordance experiment not submitted to GEO partially characterized antibody ENCFF294GTR bigWig fold change over control ENCSR628APV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM5-human ENCAB690HQC DNA False 2018-01-26 ENCODE 1 ENCFF636FDE, ENCFF910IKB 1109925339 ENCODE Processing Pipeline 7f88d25374cfe5156e70a7475c14e99c https://www.encodeproject.org/files/ENCFF294GTR/@@download/ENCFF294GTR.bigWig GRCh38 released borderline replicate concordance experiment not submitted to GEO partially characterized antibody ENCFF694PDR bigWig fold change over control ENCSR628APV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM5-human ENCAB690HQC DNA False 2018-01-26 ENCODE 2 ENCFF227IZS, ENCFF749XIH 1108893960 ENCODE Processing Pipeline 0099790835441bd2c19344cb98712ebb https://www.encodeproject.org/files/ENCFF694PDR/@@download/ENCFF694PDR.bigWig GRCh38 released borderline replicate concordance experiment not submitted to GEO partially characterized antibody ENCFF288GPT bigWig fold change over control ENCSR628APV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM5-human ENCAB690HQC DNA False 2018-01-26 ENCODE 1, 2 ENCFF227IZS, ENCFF636FDE, ENCFF749XIH, ENCFF910IKB 2045330021 ENCODE Processing Pipeline 0d143deabd86f613952846228f672298 https://www.encodeproject.org/files/ENCFF288GPT/@@download/ENCFF288GPT.bigWig GRCh38 released borderline replicate concordance experiment not submitted to GEO partially characterized antibody ENCFF866NZC bed narrowPeak peaks ENCSR628APV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM5-human ENCAB690HQC DNA False 2018-01-26 ENCODE 1 ENCFF636FDE, ENCFF910IKB 6067344 ENCODE Processing Pipeline 407b621c93f2f7d04a80a5cd109f171b https://www.encodeproject.org/files/ENCFF866NZC/@@download/ENCFF866NZC.bed.gz GRCh38 released borderline replicate concordance experiment not submitted to GEO partially characterized antibody ENCFF668FWN bigBed narrowPeak peaks ENCSR628APV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM5-human ENCAB690HQC DNA False 2018-01-26 ENCODE 1 ENCFF866NZC 11085333 ENCODE Processing Pipeline fafc9a8362fbf82901516b88c480aefa https://www.encodeproject.org/files/ENCFF668FWN/@@download/ENCFF668FWN.bigBed GRCh38 released borderline replicate concordance experiment not submitted to GEO partially characterized antibody ENCFF557HFB bed narrowPeak peaks ENCSR628APV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM5-human ENCAB690HQC DNA False 2018-01-26 ENCODE 2 ENCFF227IZS, ENCFF749XIH 6103458 ENCODE Processing Pipeline be158fb67091bd48cd434761f527436f https://www.encodeproject.org/files/ENCFF557HFB/@@download/ENCFF557HFB.bed.gz GRCh38 released borderline replicate concordance experiment not submitted to GEO partially characterized antibody ENCFF210JZF bed narrowPeak peaks ENCSR628APV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM5-human ENCAB690HQC DNA False 2018-01-26 ENCODE 1, 2 ENCFF227IZS, ENCFF636FDE, ENCFF749XIH, ENCFF910IKB 7092627 ENCODE Processing Pipeline 9687f3c3617e08efb4592759896e4b4c https://www.encodeproject.org/files/ENCFF210JZF/@@download/ENCFF210JZF.bed.gz GRCh38 released borderline replicate concordance experiment not submitted to GEO partially characterized antibody ENCFF553ZWI bigBed narrowPeak peaks ENCSR628APV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM5-human ENCAB690HQC DNA False 2018-01-26 ENCODE 1, 2 ENCFF210JZF 10911695 ENCODE Processing Pipeline eef7b32e2185a01a6eaa7e075ea34a5b https://www.encodeproject.org/files/ENCFF553ZWI/@@download/ENCFF553ZWI.bigBed GRCh38 released borderline replicate concordance experiment not submitted to GEO partially characterized antibody ENCFF711BOH bigBed narrowPeak conservative idr thresholded peaks ENCSR628APV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM5-human ENCAB690HQC DNA False 2018-01-26 ENCODE 1, 2 ENCFF546QRV 97219 ENCODE Processing Pipeline 9cf58301d42d70131853671e3db9a9de https://www.encodeproject.org/files/ENCFF711BOH/@@download/ENCFF711BOH.bigBed GRCh38 released borderline replicate concordance experiment not submitted to GEO partially characterized antibody ENCFF208FUM bigBed narrowPeak peaks ENCSR628APV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM5-human ENCAB690HQC DNA False 2018-01-26 ENCODE 2 ENCFF557HFB 11019062 ENCODE Processing Pipeline e3dc4cf1640c740d1dad60fb9368da9c https://www.encodeproject.org/files/ENCFF208FUM/@@download/ENCFF208FUM.bigBed GRCh38 released borderline replicate concordance experiment not submitted to GEO partially characterized antibody ENCFF658SJY bed narrowPeak optimal idr thresholded peaks ENCSR628APV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM5-human ENCAB690HQC DNA False 2018-01-26 ENCODE 1, 2 ENCFF210JZF, ENCFF419RSJ, ENCFF557HFB, ENCFF866NZC 30017 ENCODE Processing Pipeline 2ff700b71f660671593ac41b1f9837f9 https://www.encodeproject.org/files/ENCFF658SJY/@@download/ENCFF658SJY.bed.gz GRCh38 released borderline replicate concordance experiment not submitted to GEO partially characterized antibody ENCFF546QRV bed narrowPeak conservative idr thresholded peaks ENCSR628APV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM5-human ENCAB690HQC DNA False 2018-01-26 ENCODE 1, 2 ENCFF210JZF, ENCFF419RSJ, ENCFF557HFB, ENCFF866NZC 14281 ENCODE Processing Pipeline 4bb633257b06e699b3919da1ecc1377f https://www.encodeproject.org/files/ENCFF546QRV/@@download/ENCFF546QRV.bed.gz GRCh38 released borderline replicate concordance experiment not submitted to GEO partially characterized antibody ENCFF362JZL bigBed narrowPeak optimal idr thresholded peaks ENCSR628APV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM5-human ENCAB690HQC DNA False 2018-01-26 ENCODE 1, 2 ENCFF658SJY 116225 ENCODE Processing Pipeline 433496cf90492e3273421e63b7377b08 https://www.encodeproject.org/files/ENCFF362JZL/@@download/ENCFF362JZL.bigBed GRCh38 released borderline replicate concordance experiment not submitted to GEO partially characterized antibody ENCFF100NWH fastq reads ENCSR886RYH ChIP-seq EFO:0002067 K562 cell line Homo sapiens NONO-human ENCAB349QGP DNA False 2017-01-31 ENCODE 4 1 100 paired-ended 1 ENCFF594FPL 1737966809 Michael Snyder, Stanford 2a69d62f53fae35183433347161f586d SRA:SRR6214379 https://www.encodeproject.org/files/ENCFF100NWH/@@download/ENCFF100NWH.fastq.gz Illumina HiSeq 4000 /files/ENCFF259GQA/ released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF594FPL fastq reads ENCSR886RYH ChIP-seq EFO:0002067 K562 cell line Homo sapiens NONO-human ENCAB349QGP DNA False 2017-01-31 ENCODE 4 1 100 paired-ended 2 ENCFF100NWH 2062516689 Michael Snyder, Stanford ca6500c8c3a5e8cd80e4f2132afdae0c SRA:SRR6214379 https://www.encodeproject.org/files/ENCFF594FPL/@@download/ENCFF594FPL.fastq.gz Illumina HiSeq 4000 /files/ENCFF837MIV/ released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF902KOT fastq reads ENCSR886RYH ChIP-seq EFO:0002067 K562 cell line Homo sapiens NONO-human ENCAB349QGP DNA False 2017-01-31 ENCODE 3 1 100 paired-ended 1 ENCFF499MPN 1986861205 Michael Snyder, Stanford 9fce5d9831c5240bca1c343285130a25 SRA:SRR6214378 https://www.encodeproject.org/files/ENCFF902KOT/@@download/ENCFF902KOT.fastq.gz Illumina HiSeq 4000 /files/ENCFF498JMO/ released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF499MPN fastq reads ENCSR886RYH ChIP-seq EFO:0002067 K562 cell line Homo sapiens NONO-human ENCAB349QGP DNA False 2017-01-31 ENCODE 3 1 100 paired-ended 2 ENCFF902KOT 2374977145 Michael Snyder, Stanford 9c0d2aaf56caeac9f7676719eb0a5a88 SRA:SRR6214378 https://www.encodeproject.org/files/ENCFF499MPN/@@download/ENCFF499MPN.fastq.gz Illumina HiSeq 4000 /files/ENCFF502GTS/ released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF334YKJ bam unfiltered alignments ENCSR886RYH ChIP-seq EFO:0002067 K562 cell line Homo sapiens NONO-human ENCAB349QGP DNA False 2017-01-31 ENCODE 4 100 ENCFF100NWH, ENCFF594FPL, ENCFF643CGH 3280039901 ENCODE Processing Pipeline 6d03124ccf32ca148665a3689c326f81 https://www.encodeproject.org/files/ENCFF334YKJ/@@download/ENCFF334YKJ.bam GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF008CUX bam alignments ENCSR886RYH ChIP-seq EFO:0002067 K562 cell line Homo sapiens NONO-human ENCAB349QGP DNA False 2017-01-31 ENCODE 3 100 ENCFF499MPN, ENCFF643CGH, ENCFF902KOT 2160188884 ENCODE Processing Pipeline b634b7a7acd2cb6dc69ee3e787289408 https://www.encodeproject.org/files/ENCFF008CUX/@@download/ENCFF008CUX.bam GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF549MBS bam alignments ENCSR886RYH ChIP-seq EFO:0002067 K562 cell line Homo sapiens NONO-human ENCAB349QGP DNA False 2017-01-31 ENCODE 4 100 ENCFF100NWH, ENCFF594FPL, ENCFF643CGH 1859190467 ENCODE Processing Pipeline 96f614ace15c64570d5b67b0189c3311 https://www.encodeproject.org/files/ENCFF549MBS/@@download/ENCFF549MBS.bam GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF085YFB bam unfiltered alignments ENCSR886RYH ChIP-seq EFO:0002067 K562 cell line Homo sapiens NONO-human ENCAB349QGP DNA False 2017-01-31 ENCODE 3 100 ENCFF499MPN, ENCFF643CGH, ENCFF902KOT 3681631141 ENCODE Processing Pipeline a73ae8f6a34e2cb3b593318df1f7dc93 https://www.encodeproject.org/files/ENCFF085YFB/@@download/ENCFF085YFB.bam GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF373XUA bigBed narrowPeak peaks ENCSR886RYH ChIP-seq EFO:0002067 K562 cell line Homo sapiens NONO-human ENCAB349QGP DNA False 2017-01-31 ENCODE 4 ENCFF836JVP 13248258 ENCODE Processing Pipeline b411b61f3566db6590b215e557183a77 https://www.encodeproject.org/files/ENCFF373XUA/@@download/ENCFF373XUA.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF700QOB bigBed narrowPeak peaks ENCSR886RYH ChIP-seq EFO:0002067 K562 cell line Homo sapiens NONO-human ENCAB349QGP DNA False 2017-01-31 ENCODE 3, 4 ENCFF715XCG 13309176 ENCODE Processing Pipeline 48cdb7bafea1ed7b9d794bdfbd8cf1c4 https://www.encodeproject.org/files/ENCFF700QOB/@@download/ENCFF700QOB.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF423KCR bigWig signal p-value ENCSR886RYH ChIP-seq EFO:0002067 K562 cell line Homo sapiens NONO-human ENCAB349QGP DNA False 2017-01-31 ENCODE 3 ENCFF008CUX, ENCFF790TAN 876854436 ENCODE Processing Pipeline 7c5a3157beb21bbbf7c586546c96f777 https://www.encodeproject.org/files/ENCFF423KCR/@@download/ENCFF423KCR.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF244RGG bigWig fold change over control ENCSR886RYH ChIP-seq EFO:0002067 K562 cell line Homo sapiens NONO-human ENCAB349QGP DNA False 2017-01-31 ENCODE 3 ENCFF008CUX, ENCFF790TAN 919164875 ENCODE Processing Pipeline d8f3706f302986dc871d505e99d6496d https://www.encodeproject.org/files/ENCFF244RGG/@@download/ENCFF244RGG.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF378PWA bigWig fold change over control ENCSR886RYH ChIP-seq EFO:0002067 K562 cell line Homo sapiens NONO-human ENCAB349QGP DNA False 2017-01-31 ENCODE 3, 4 ENCFF008CUX, ENCFF549MBS, ENCFF712WXB, ENCFF790TAN 1785974511 ENCODE Processing Pipeline bb604665e6d1d799b49e14e3b1ec3a0a https://www.encodeproject.org/files/ENCFF378PWA/@@download/ENCFF378PWA.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF055LOU bigWig fold change over control ENCSR886RYH ChIP-seq EFO:0002067 K562 cell line Homo sapiens NONO-human ENCAB349QGP DNA False 2017-01-31 ENCODE 4 ENCFF549MBS, ENCFF712WXB 852968789 ENCODE Processing Pipeline fbc6ccff741229f1cf7dc48505d359ef https://www.encodeproject.org/files/ENCFF055LOU/@@download/ENCFF055LOU.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF836JVP bed narrowPeak peaks ENCSR886RYH ChIP-seq EFO:0002067 K562 cell line Homo sapiens NONO-human ENCAB349QGP DNA False 2017-01-31 ENCODE 4 ENCFF549MBS, ENCFF712WXB 5999010 ENCODE Processing Pipeline 249ca7c1a1dcff6534966d47c89fb73f https://www.encodeproject.org/files/ENCFF836JVP/@@download/ENCFF836JVP.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF221UCP bigBed narrowPeak peaks ENCSR886RYH ChIP-seq EFO:0002067 K562 cell line Homo sapiens NONO-human ENCAB349QGP DNA False 2017-01-31 ENCODE 3 ENCFF239JIE 11173441 ENCODE Processing Pipeline 4ddcccbe8dcee06345c4be5f68b86802 https://www.encodeproject.org/files/ENCFF221UCP/@@download/ENCFF221UCP.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF778RTF bigBed narrowPeak conservative idr thresholded peaks ENCSR886RYH ChIP-seq EFO:0002067 K562 cell line Homo sapiens NONO-human ENCAB349QGP DNA False 2017-01-31 ENCODE 3, 4 ENCFF270PLW 350487 ENCODE Processing Pipeline de53a60722cc552b2bf7ed0933d76901 https://www.encodeproject.org/files/ENCFF778RTF/@@download/ENCFF778RTF.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF379IFF bigWig signal p-value ENCSR886RYH ChIP-seq EFO:0002067 K562 cell line Homo sapiens NONO-human ENCAB349QGP DNA False 2017-01-31 ENCODE 4 ENCFF549MBS, ENCFF712WXB 886275076 ENCODE Processing Pipeline 667b1c457d316a06479b0aad98250113 https://www.encodeproject.org/files/ENCFF379IFF/@@download/ENCFF379IFF.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF364ZPD bigWig signal p-value ENCSR886RYH ChIP-seq EFO:0002067 K562 cell line Homo sapiens NONO-human ENCAB349QGP DNA False 2017-01-31 ENCODE 3, 4 ENCFF008CUX, ENCFF549MBS, ENCFF712WXB, ENCFF790TAN 1632696057 ENCODE Processing Pipeline 2c91382396289179a495616d262de5d3 https://www.encodeproject.org/files/ENCFF364ZPD/@@download/ENCFF364ZPD.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF239JIE bed narrowPeak peaks ENCSR886RYH ChIP-seq EFO:0002067 K562 cell line Homo sapiens NONO-human ENCAB349QGP DNA False 2017-01-31 ENCODE 3 ENCFF008CUX, ENCFF790TAN 5865333 ENCODE Processing Pipeline da0fa3d73529c424e09c5abf56b6b4f0 https://www.encodeproject.org/files/ENCFF239JIE/@@download/ENCFF239JIE.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF715XCG bed narrowPeak peaks ENCSR886RYH ChIP-seq EFO:0002067 K562 cell line Homo sapiens NONO-human ENCAB349QGP DNA False 2017-01-31 ENCODE 3, 4 ENCFF008CUX, ENCFF549MBS, ENCFF712WXB, ENCFF790TAN 6963216 ENCODE Processing Pipeline f44c4dc6dd551b9a0f588fc918dd8e81 https://www.encodeproject.org/files/ENCFF715XCG/@@download/ENCFF715XCG.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF270PLW bed narrowPeak conservative idr thresholded peaks ENCSR886RYH ChIP-seq EFO:0002067 K562 cell line Homo sapiens NONO-human ENCAB349QGP DNA False 2017-01-31 ENCODE 3, 4 ENCFF239JIE, ENCFF419RSJ, ENCFF715XCG, ENCFF836JVP 163058 ENCODE Processing Pipeline 8ad8a6b225ba8f9685198c544907104a https://www.encodeproject.org/files/ENCFF270PLW/@@download/ENCFF270PLW.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF515YFU bed narrowPeak optimal idr thresholded peaks ENCSR886RYH ChIP-seq EFO:0002067 K562 cell line Homo sapiens NONO-human ENCAB349QGP DNA False 2017-01-31 ENCODE 3, 4 ENCFF239JIE, ENCFF419RSJ, ENCFF715XCG, ENCFF836JVP 239443 ENCODE Processing Pipeline 8752a1dbef9a6536bb34bc31cad123b3 https://www.encodeproject.org/files/ENCFF515YFU/@@download/ENCFF515YFU.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF716UDC bigBed narrowPeak optimal idr thresholded peaks ENCSR886RYH ChIP-seq EFO:0002067 K562 cell line Homo sapiens NONO-human ENCAB349QGP DNA False 2017-01-31 ENCODE 3, 4 ENCFF515YFU 458398 ENCODE Processing Pipeline 6418214b9b8b7f71bd2d2757f92b1e3c https://www.encodeproject.org/files/ENCFF716UDC/@@download/ENCFF716UDC.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF051WRC bam unfiltered alignments ENCSR886RYH ChIP-seq EFO:0002067 K562 cell line Homo sapiens NONO-human ENCAB349QGP DNA False 2017-01-31 ENCODE 3 100 ENCFF499MPN, ENCFF807MUK, ENCFF902KOT 3683521104 ENCODE Processing Pipeline fdb3367f44d6e67d49ebdb99b601bccc https://www.encodeproject.org/files/ENCFF051WRC/@@download/ENCFF051WRC.bam hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF594DTN bam unfiltered alignments ENCSR886RYH ChIP-seq EFO:0002067 K562 cell line Homo sapiens NONO-human ENCAB349QGP DNA False 2017-01-31 ENCODE 4 100 ENCFF100NWH, ENCFF594FPL, ENCFF807MUK 3281188825 ENCODE Processing Pipeline 9e6ba1a7d10c4b3485ed5c6d31c800cf https://www.encodeproject.org/files/ENCFF594DTN/@@download/ENCFF594DTN.bam hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF839XNR bam alignments ENCSR886RYH ChIP-seq EFO:0002067 K562 cell line Homo sapiens NONO-human ENCAB349QGP DNA False 2017-01-31 ENCODE 3 100 ENCFF499MPN, ENCFF807MUK, ENCFF902KOT 2159513349 ENCODE Processing Pipeline 36d2e7a2a2b18e4052ccaf77db9bacce https://www.encodeproject.org/files/ENCFF839XNR/@@download/ENCFF839XNR.bam hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF082MPF bam alignments ENCSR886RYH ChIP-seq EFO:0002067 K562 cell line Homo sapiens NONO-human ENCAB349QGP DNA False 2017-01-31 ENCODE 4 100 ENCFF100NWH, ENCFF594FPL, ENCFF807MUK 1858610726 ENCODE Processing Pipeline df9b1576b5d61a846c96e740701e1d25 https://www.encodeproject.org/files/ENCFF082MPF/@@download/ENCFF082MPF.bam hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF277LMC bigWig fold change over control ENCSR886RYH ChIP-seq EFO:0002067 K562 cell line Homo sapiens NONO-human ENCAB349QGP DNA False 2017-01-31 ENCODE 3, 4 ENCFF082MPF, ENCFF160VXC, ENCFF834TUP, ENCFF839XNR 1783911829 ENCODE Processing Pipeline a4f351e55162744b114b388930f95927 https://www.encodeproject.org/files/ENCFF277LMC/@@download/ENCFF277LMC.bigWig hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF433ZFX bed narrowPeak peaks ENCSR886RYH ChIP-seq EFO:0002067 K562 cell line Homo sapiens NONO-human ENCAB349QGP DNA False 2017-01-31 ENCODE 4 ENCFF082MPF, ENCFF834TUP 5891678 ENCODE Processing Pipeline 682e9aba849cd0eeaa24e1017405ec66 https://www.encodeproject.org/files/ENCFF433ZFX/@@download/ENCFF433ZFX.bed.gz hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF047KXM bigBed narrowPeak peaks ENCSR886RYH ChIP-seq EFO:0002067 K562 cell line Homo sapiens NONO-human ENCAB349QGP DNA False 2017-01-31 ENCODE 3, 4 ENCFF324CAZ 13293585 ENCODE Processing Pipeline 24507cba7b11a05e6137b930a8e2dc6c https://www.encodeproject.org/files/ENCFF047KXM/@@download/ENCFF047KXM.bigBed hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF515JZL bigWig signal p-value ENCSR886RYH ChIP-seq EFO:0002067 K562 cell line Homo sapiens NONO-human ENCAB349QGP DNA False 2017-01-31 ENCODE 3 ENCFF160VXC, ENCFF839XNR 990904143 ENCODE Processing Pipeline d1e3883478a6eb24eb29ce76eca52fb2 https://www.encodeproject.org/files/ENCFF515JZL/@@download/ENCFF515JZL.bigWig hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF204XOX bigWig signal p-value ENCSR886RYH ChIP-seq EFO:0002067 K562 cell line Homo sapiens NONO-human ENCAB349QGP DNA False 2017-01-31 ENCODE 4 ENCFF082MPF, ENCFF834TUP 1013299724 ENCODE Processing Pipeline 2af91443dc3adbbd8b8a9fc735fe0f58 https://www.encodeproject.org/files/ENCFF204XOX/@@download/ENCFF204XOX.bigWig hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF273NDQ bigWig signal p-value ENCSR886RYH ChIP-seq EFO:0002067 K562 cell line Homo sapiens NONO-human ENCAB349QGP DNA False 2017-01-31 ENCODE 3, 4 ENCFF082MPF, ENCFF160VXC, ENCFF834TUP, ENCFF839XNR 1529466509 ENCODE Processing Pipeline f7d7c774aab48448722fe32a9463d867 https://www.encodeproject.org/files/ENCFF273NDQ/@@download/ENCFF273NDQ.bigWig hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF490QJK bigWig fold change over control ENCSR886RYH ChIP-seq EFO:0002067 K562 cell line Homo sapiens NONO-human ENCAB349QGP DNA False 2017-01-31 ENCODE 3 ENCFF160VXC, ENCFF839XNR 918619002 ENCODE Processing Pipeline ae6bc0566044c7d27ce9f08809b86ba6 https://www.encodeproject.org/files/ENCFF490QJK/@@download/ENCFF490QJK.bigWig hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF902MEJ bigWig fold change over control ENCSR886RYH ChIP-seq EFO:0002067 K562 cell line Homo sapiens NONO-human ENCAB349QGP DNA False 2017-01-31 ENCODE 4 ENCFF082MPF, ENCFF834TUP 852178373 ENCODE Processing Pipeline 8f709b116c6962c367820a0723010d7d https://www.encodeproject.org/files/ENCFF902MEJ/@@download/ENCFF902MEJ.bigWig hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF784OAB bed narrowPeak peaks ENCSR886RYH ChIP-seq EFO:0002067 K562 cell line Homo sapiens NONO-human ENCAB349QGP DNA False 2017-01-31 ENCODE 3 ENCFF160VXC, ENCFF839XNR 5864789 ENCODE Processing Pipeline 956d30c471c2d20a4afb3582b7d39e7d https://www.encodeproject.org/files/ENCFF784OAB/@@download/ENCFF784OAB.bed.gz hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF324CAZ bed narrowPeak peaks ENCSR886RYH ChIP-seq EFO:0002067 K562 cell line Homo sapiens NONO-human ENCAB349QGP DNA False 2017-01-31 ENCODE 3, 4 ENCFF082MPF, ENCFF160VXC, ENCFF834TUP, ENCFF839XNR 6957977 ENCODE Processing Pipeline 8e14f0003fe0863336bead67e79c33be https://www.encodeproject.org/files/ENCFF324CAZ/@@download/ENCFF324CAZ.bed.gz hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF403UAW bigBed narrowPeak peaks ENCSR886RYH ChIP-seq EFO:0002067 K562 cell line Homo sapiens NONO-human ENCAB349QGP DNA False 2017-01-31 ENCODE 3 ENCFF784OAB 11158809 ENCODE Processing Pipeline 90827274b161ac30273e124d00a782a2 https://www.encodeproject.org/files/ENCFF403UAW/@@download/ENCFF403UAW.bigBed hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF342GEK bigBed narrowPeak peaks ENCSR886RYH ChIP-seq EFO:0002067 K562 cell line Homo sapiens NONO-human ENCAB349QGP DNA False 2017-01-31 ENCODE 4 ENCFF433ZFX 13185969 ENCODE Processing Pipeline ed138282bf89b69d1ad5282b7c7db5f8 https://www.encodeproject.org/files/ENCFF342GEK/@@download/ENCFF342GEK.bigBed hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF591UOR bed narrowPeak conservative idr thresholded peaks ENCSR886RYH ChIP-seq EFO:0002067 K562 cell line Homo sapiens NONO-human ENCAB349QGP DNA False 2017-01-31 ENCODE 3, 4 ENCFF001TDO, ENCFF324CAZ, ENCFF433ZFX, ENCFF784OAB 162311 ENCODE Processing Pipeline a8bba108801e3d5d8a4d273aa09208db https://www.encodeproject.org/files/ENCFF591UOR/@@download/ENCFF591UOR.bed.gz hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF651GBA bigBed narrowPeak conservative idr thresholded peaks ENCSR886RYH ChIP-seq EFO:0002067 K562 cell line Homo sapiens NONO-human ENCAB349QGP DNA False 2017-01-31 ENCODE 3, 4 ENCFF591UOR 347880 ENCODE Processing Pipeline a7ef612fc13d5ac7459e0c3f2d5858f8 https://www.encodeproject.org/files/ENCFF651GBA/@@download/ENCFF651GBA.bigBed hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF776YPS bed narrowPeak optimal idr thresholded peaks ENCSR886RYH ChIP-seq EFO:0002067 K562 cell line Homo sapiens NONO-human ENCAB349QGP DNA False 2017-01-31 ENCODE 3, 4 ENCFF001TDO, ENCFF324CAZ, ENCFF433ZFX, ENCFF784OAB 232581 ENCODE Processing Pipeline 5c0614ca3f5ea89ffbd81ad107a5c28e https://www.encodeproject.org/files/ENCFF776YPS/@@download/ENCFF776YPS.bed.gz hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF277AUN bigBed narrowPeak optimal idr thresholded peaks ENCSR886RYH ChIP-seq EFO:0002067 K562 cell line Homo sapiens NONO-human ENCAB349QGP DNA False 2017-01-31 ENCODE 3, 4 ENCFF776YPS 446480 ENCODE Processing Pipeline 231a4031fdb8faa1dec15afe218aaee0 https://www.encodeproject.org/files/ENCFF277AUN/@@download/ENCFF277AUN.bigBed hg19 released low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF000YLT bam alignments ENCSR000EGM ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCF-human ENCAB000AFQ DNA see document see document False 2012-05-14 ENCODE 1 1 585348139 Michael Snyder, Stanford 9c5be3e035b833b2ac0d01b79cf276b1 https://www.encodeproject.org/files/ENCFF000YLT/@@download/ENCFF000YLT.bam hg19 archived mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample, missing derived_from ENCFF000YLU bam alignments ENCSR000EGM ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCF-human ENCAB000AFQ DNA see document see document False 2012-05-14 ENCODE 2 1 594080295 Michael Snyder, Stanford ae37f275fa86b101cd3325a460ef26da https://www.encodeproject.org/files/ENCFF000YLU/@@download/ENCFF000YLU.bam hg19 archived mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample, missing derived_from ENCFF000YLV bigBed narrowPeak peaks ENCSR000EGM ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCF-human ENCAB000AFQ DNA see document see document False 2012-05-14 ENCODE ENCFF001VMZ 4325938 Michael Snyder, Stanford 39a7677ee8cda57745096b65dd9be08f https://www.encodeproject.org/files/ENCFF000YLV/@@download/ENCFF000YLV.bigBed hg19 archived mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF000YLW fastq reads ENCSR000EGM ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCF-human ENCAB000AFQ DNA see document see document False 2012-05-14 ENCODE 1 1 36 single-ended 1247048140 Michael Snyder, Stanford df317c6d6834e7caed395554a8fb9f99 https://www.encodeproject.org/files/ENCFF000YLW/@@download/ENCFF000YLW.fastq.gz Illumina Genome Analyzer /files/ENCFF000YRB/ released mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF000YLY fastq reads ENCSR000EGM ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCF-human ENCAB000AFQ DNA see document see document False 2012-05-14 ENCODE 2 1 36 single-ended 1209979886 Michael Snyder, Stanford 60a1aaa1423bd07c27962531dc85fe3f https://www.encodeproject.org/files/ENCFF000YLY/@@download/ENCFF000YLY.fastq.gz Illumina Genome Analyzer /files/ENCFF000YRB/ released mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF000YMA bigWig signal ENCSR000EGM ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCF-human ENCAB000AFQ DNA see document see document False 2012-05-14 ENCODE 429000333 Michael Snyder, Stanford 6509b380b70220484f8b6da053779d34 https://www.encodeproject.org/files/ENCFF000YMA/@@download/ENCFF000YMA.bigWig hg19 archived mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample, missing derived_from ENCFF001VMZ bed narrowPeak peaks ENCSR000EGM ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCF-human ENCAB000AFQ DNA see document see document False 2012-05-14 ENCODE 1633362 Michael Snyder, Stanford e3fee0039ab77f91306e2853aafa3005 https://www.encodeproject.org/files/ENCFF001VMZ/@@download/ENCFF001VMZ.bed.gz hg19 archived mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample, missing derived_from ENCFF002CWL bed narrowPeak optimal idr thresholded peaks ENCSR000EGM ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCF-human ENCAB000AFQ DNA see document see document False 2012-05-14 ENCODE 1125159 ENCODE Consortium Analysis Working Group 7c774d345a596a6b268fcab76040507a https://www.encodeproject.org/files/ENCFF002CWL/@@download/ENCFF002CWL.bed.gz hg19 archived mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample, missing derived_from ENCFF595ZII bigBed narrowPeak optimal idr thresholded peaks ENCSR000EGM ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCF-human ENCAB000AFQ DNA see document see document False 2012-05-14 ENCODE ENCFF002CWL 2267325 ENCODE Consortium 2b2f6640b06b7fc7a40bc06af437263d https://www.encodeproject.org/files/ENCFF595ZII/@@download/ENCFF595ZII.bigBed hg19 archived mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF442SVG bam unfiltered alignments ENCSR000EGM ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCF-human ENCAB000AFQ DNA see document see document False 2012-05-14 ENCODE 1 ENCFF000YLW, ENCFF643CGH 1343067545 ENCODE Processing Pipeline 3538e327e757c870d5c503e651b798d0 https://www.encodeproject.org/files/ENCFF442SVG/@@download/ENCFF442SVG.bam GRCh38 released mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF650KWF bam unfiltered alignments ENCSR000EGM ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCF-human ENCAB000AFQ DNA see document see document False 2012-05-14 ENCODE 2 ENCFF000YLY, ENCFF643CGH 1341278621 ENCODE Processing Pipeline 2e8fa7478753c9a280838c61101fca35 https://www.encodeproject.org/files/ENCFF650KWF/@@download/ENCFF650KWF.bam GRCh38 released mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF198CVB bam alignments ENCSR000EGM ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCF-human ENCAB000AFQ DNA see document see document False 2012-05-14 ENCODE 1 36 ENCFF000YLW, ENCFF643CGH 876019621 ENCODE Processing Pipeline 4bb960de776e79168519be328d422b70 https://www.encodeproject.org/files/ENCFF198CVB/@@download/ENCFF198CVB.bam GRCh38 released mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF488CXC bam alignments ENCSR000EGM ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCF-human ENCAB000AFQ DNA see document see document False 2012-05-14 ENCODE 2 36 ENCFF000YLY, ENCFF643CGH 910627192 ENCODE Processing Pipeline 0ef9641acc39df50dbef730925795f46 https://www.encodeproject.org/files/ENCFF488CXC/@@download/ENCFF488CXC.bam GRCh38 released mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF125EKW bigWig fold change over control ENCSR000EGM ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCF-human ENCAB000AFQ DNA see document see document False 2012-05-14 ENCODE 2 ENCFF023NGN, ENCFF488CXC 436211895 ENCODE Processing Pipeline 24cbf5ef7dd2ffe6b41fe9ef6cf859b7 https://www.encodeproject.org/files/ENCFF125EKW/@@download/ENCFF125EKW.bigWig GRCh38 released mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF973WXW bed narrowPeak peaks ENCSR000EGM ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCF-human ENCAB000AFQ DNA see document see document False 2012-05-14 ENCODE 2 ENCFF023NGN, ENCFF488CXC 4799039 ENCODE Processing Pipeline bc4273f7f883ff050b00b56cb922128e https://www.encodeproject.org/files/ENCFF973WXW/@@download/ENCFF973WXW.bed.gz GRCh38 released mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF265DRT bigWig signal p-value ENCSR000EGM ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCF-human ENCAB000AFQ DNA see document see document False 2012-05-14 ENCODE 2 ENCFF023NGN, ENCFF488CXC 482613985 ENCODE Processing Pipeline b4572c9c8b6a1bb7f0c52c5a36c02d25 https://www.encodeproject.org/files/ENCFF265DRT/@@download/ENCFF265DRT.bigWig GRCh38 released mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF940DPJ bigBed narrowPeak peaks ENCSR000EGM ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCF-human ENCAB000AFQ DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF175EOP 9409226 ENCODE Processing Pipeline 0b59a2bac9609e6e2e90bb2c37f126e1 https://www.encodeproject.org/files/ENCFF940DPJ/@@download/ENCFF940DPJ.bigBed GRCh38 released mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF092CEL bigBed narrowPeak conservative idr thresholded peaks ENCSR000EGM ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCF-human ENCAB000AFQ DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF041ODC 1515066 ENCODE Processing Pipeline bfdf9869f23c2af879de72eea1bd3ea2 https://www.encodeproject.org/files/ENCFF092CEL/@@download/ENCFF092CEL.bigBed GRCh38 released mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF439TAU bigWig signal p-value ENCSR000EGM ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCF-human ENCAB000AFQ DNA see document see document False 2012-05-14 ENCODE 1 ENCFF023NGN, ENCFF198CVB 465073092 ENCODE Processing Pipeline c65d19c17d86b9f6e6c39c9200acc7e5 https://www.encodeproject.org/files/ENCFF439TAU/@@download/ENCFF439TAU.bigWig GRCh38 released mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF322EGW bigWig signal p-value ENCSR000EGM ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCF-human ENCAB000AFQ DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF023NGN, ENCFF198CVB, ENCFF488CXC 546299763 ENCODE Processing Pipeline 104fb8a78c4185fa4344db89a4ddea17 https://www.encodeproject.org/files/ENCFF322EGW/@@download/ENCFF322EGW.bigWig GRCh38 released mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF894ZLN bigWig fold change over control ENCSR000EGM ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCF-human ENCAB000AFQ DNA see document see document False 2012-05-14 ENCODE 1 ENCFF023NGN, ENCFF198CVB 418425641 ENCODE Processing Pipeline 4156dcf114957df76a07050131211588 https://www.encodeproject.org/files/ENCFF894ZLN/@@download/ENCFF894ZLN.bigWig GRCh38 released mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF050CCI bigWig fold change over control ENCSR000EGM ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCF-human ENCAB000AFQ DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF023NGN, ENCFF198CVB, ENCFF488CXC 712440157 ENCODE Processing Pipeline 0b24b56808a00ab840f3b76888867fac https://www.encodeproject.org/files/ENCFF050CCI/@@download/ENCFF050CCI.bigWig GRCh38 released mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF694KDC bed narrowPeak peaks ENCSR000EGM ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCF-human ENCAB000AFQ DNA see document see document False 2012-05-14 ENCODE 1 ENCFF023NGN, ENCFF198CVB 4688825 ENCODE Processing Pipeline fb2ecaaa5017a77872fc0855a617f2bd https://www.encodeproject.org/files/ENCFF694KDC/@@download/ENCFF694KDC.bed.gz GRCh38 released mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF175EOP bed narrowPeak peaks ENCSR000EGM ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCF-human ENCAB000AFQ DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF023NGN, ENCFF198CVB, ENCFF488CXC 4501560 ENCODE Processing Pipeline 71a317358eef60f6d10dee652ae6db7b https://www.encodeproject.org/files/ENCFF175EOP/@@download/ENCFF175EOP.bed.gz GRCh38 released mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF488EPU bigBed narrowPeak peaks ENCSR000EGM ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCF-human ENCAB000AFQ DNA see document see document False 2012-05-14 ENCODE 1 ENCFF694KDC 11127430 ENCODE Processing Pipeline fbd4d817cc1fbcf3aa0f2ecbcaa886bd https://www.encodeproject.org/files/ENCFF488EPU/@@download/ENCFF488EPU.bigBed GRCh38 released mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF800IHM bigBed narrowPeak peaks ENCSR000EGM ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCF-human ENCAB000AFQ DNA see document see document False 2012-05-14 ENCODE 2 ENCFF973WXW 11058644 ENCODE Processing Pipeline 94193662a0f2d4c5fc7109dbeb6a530d https://www.encodeproject.org/files/ENCFF800IHM/@@download/ENCFF800IHM.bigBed GRCh38 released mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF041ODC bed narrowPeak conservative idr thresholded peaks ENCSR000EGM ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCF-human ENCAB000AFQ DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF175EOP, ENCFF419RSJ, ENCFF694KDC, ENCFF973WXW 870798 ENCODE Processing Pipeline 0685e5699688caba74c62ee3c87090a9 https://www.encodeproject.org/files/ENCFF041ODC/@@download/ENCFF041ODC.bed.gz GRCh38 released mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF396BZQ bed narrowPeak optimal idr thresholded peaks ENCSR000EGM ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCF-human ENCAB000AFQ DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF175EOP, ENCFF419RSJ, ENCFF694KDC, ENCFF973WXW 912199 ENCODE Processing Pipeline ec6d58713b0306f762dbc4cab091df71 https://www.encodeproject.org/files/ENCFF396BZQ/@@download/ENCFF396BZQ.bed.gz GRCh38 released mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF651WYF bigBed narrowPeak optimal idr thresholded peaks ENCSR000EGM ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCF-human ENCAB000AFQ DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF396BZQ 1570949 ENCODE Processing Pipeline 03f9f61278a78447e6a868d439f248d1 https://www.encodeproject.org/files/ENCFF651WYF/@@download/ENCFF651WYF.bigBed GRCh38 released mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF496SZR bam alignments ENCSR000EGM ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCF-human ENCAB000AFQ DNA see document see document False 2012-05-14 ENCODE 2 36 ENCFF000YLY, ENCFF807MUK 911289908 ENCODE Processing Pipeline cbad410c71b854bdb7576e8e12d5a0f1 https://www.encodeproject.org/files/ENCFF496SZR/@@download/ENCFF496SZR.bam hg19 released mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF298LBZ bam unfiltered alignments ENCSR000EGM ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCF-human ENCAB000AFQ DNA see document see document False 2012-05-14 ENCODE 2 36 ENCFF000YLY, ENCFF807MUK 1336506239 ENCODE Processing Pipeline 9e48411c43e54131b98516be8545d2ca https://www.encodeproject.org/files/ENCFF298LBZ/@@download/ENCFF298LBZ.bam hg19 released mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF835DYU bam unfiltered alignments ENCSR000EGM ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCF-human ENCAB000AFQ DNA see document see document False 2012-05-14 ENCODE 1 36 ENCFF000YLW, ENCFF807MUK 1338156396 ENCODE Processing Pipeline 976e5e2306407f6c199a2af26806d695 https://www.encodeproject.org/files/ENCFF835DYU/@@download/ENCFF835DYU.bam hg19 released mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF487UYG bam alignments ENCSR000EGM ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCF-human ENCAB000AFQ DNA see document see document False 2012-05-14 ENCODE 1 36 ENCFF000YLW, ENCFF807MUK 876636084 ENCODE Processing Pipeline 943c2ad82654a7d8cca7abd29e585c4f https://www.encodeproject.org/files/ENCFF487UYG/@@download/ENCFF487UYG.bam hg19 released mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF261HAP bigWig signal p-value ENCSR000EGM ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCF-human ENCAB000AFQ DNA see document see document False 2012-05-14 ENCODE 2 ENCFF496SZR, ENCFF710NTS 429965446 ENCODE Processing Pipeline 9604f9c1a899d2d1869b9d10a7316454 https://www.encodeproject.org/files/ENCFF261HAP/@@download/ENCFF261HAP.bigWig hg19 released mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF843MQQ bigWig signal p-value ENCSR000EGM ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCF-human ENCAB000AFQ DNA see document see document False 2012-05-14 ENCODE 1 ENCFF487UYG, ENCFF710NTS 450178353 ENCODE Processing Pipeline 0252f6d5c430607474fffcf4b47161f3 https://www.encodeproject.org/files/ENCFF843MQQ/@@download/ENCFF843MQQ.bigWig hg19 released mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF545UAE bigWig fold change over control ENCSR000EGM ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCF-human ENCAB000AFQ DNA see document see document False 2012-05-14 ENCODE 1 ENCFF487UYG, ENCFF710NTS 418903851 ENCODE Processing Pipeline fcc46b2384498a571f5d278d007670ea https://www.encodeproject.org/files/ENCFF545UAE/@@download/ENCFF545UAE.bigWig hg19 released mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF468HJA bigWig signal p-value ENCSR000EGM ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCF-human ENCAB000AFQ DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF487UYG, ENCFF496SZR, ENCFF710NTS 581535890 ENCODE Processing Pipeline bccd815ac0aef78aa90af0f11059466f https://www.encodeproject.org/files/ENCFF468HJA/@@download/ENCFF468HJA.bigWig hg19 released mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF061IVP bigWig fold change over control ENCSR000EGM ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCF-human ENCAB000AFQ DNA see document see document False 2012-05-14 ENCODE 2 ENCFF496SZR, ENCFF710NTS 436459110 ENCODE Processing Pipeline f886ff90c7ac253a32f5c04d6eb71812 https://www.encodeproject.org/files/ENCFF061IVP/@@download/ENCFF061IVP.bigWig hg19 released mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF545EHA bed narrowPeak peaks ENCSR000EGM ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCF-human ENCAB000AFQ DNA see document see document False 2012-05-14 ENCODE 2 ENCFF496SZR, ENCFF710NTS 4817312 ENCODE Processing Pipeline f537e875ce6fc4c5e3a7015a07e63207 https://www.encodeproject.org/files/ENCFF545EHA/@@download/ENCFF545EHA.bed.gz hg19 released mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF652VUV bigBed narrowPeak optimal idr thresholded peaks ENCSR000EGM ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCF-human ENCAB000AFQ DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF738TKN 1559780 ENCODE Processing Pipeline 45248395018947a8478a1c5a0b794f93 https://www.encodeproject.org/files/ENCFF652VUV/@@download/ENCFF652VUV.bigBed hg19 released mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF933ZLL bigWig fold change over control ENCSR000EGM ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCF-human ENCAB000AFQ DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF487UYG, ENCFF496SZR, ENCFF710NTS 727963098 ENCODE Processing Pipeline 688dd84c7821fdcba7a237b0d0bfcf24 https://www.encodeproject.org/files/ENCFF933ZLL/@@download/ENCFF933ZLL.bigWig hg19 released mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF264LXL bed narrowPeak peaks ENCSR000EGM ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCF-human ENCAB000AFQ DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF487UYG, ENCFF496SZR, ENCFF710NTS 4182075 ENCODE Processing Pipeline d37764996284c4fb0667c44061e5406b https://www.encodeproject.org/files/ENCFF264LXL/@@download/ENCFF264LXL.bed.gz hg19 released mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF559HEE bed narrowPeak conservative idr thresholded peaks ENCSR000EGM ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCF-human ENCAB000AFQ DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF001TDO, ENCFF264LXL, ENCFF545EHA, ENCFF595QHF 866636 ENCODE Processing Pipeline 3f577d118c3c2ae7f868e48972c1ff26 https://www.encodeproject.org/files/ENCFF559HEE/@@download/ENCFF559HEE.bed.gz hg19 released mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF985RSI bigBed narrowPeak peaks ENCSR000EGM ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCF-human ENCAB000AFQ DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF264LXL 8666822 ENCODE Processing Pipeline 86762b9db51cd07bb16f3419178f8b5e https://www.encodeproject.org/files/ENCFF985RSI/@@download/ENCFF985RSI.bigBed hg19 released mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF442VVV bigBed narrowPeak conservative idr thresholded peaks ENCSR000EGM ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCF-human ENCAB000AFQ DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF559HEE 1508265 ENCODE Processing Pipeline 087cb3509ee96bd17488ad53a53322c6 https://www.encodeproject.org/files/ENCFF442VVV/@@download/ENCFF442VVV.bigBed hg19 released mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF950ANB bigBed narrowPeak peaks ENCSR000EGM ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCF-human ENCAB000AFQ DNA see document see document False 2012-05-14 ENCODE 1 ENCFF595QHF 11121615 ENCODE Processing Pipeline 11486020a5d918a1b88bc2a04d26d217 https://www.encodeproject.org/files/ENCFF950ANB/@@download/ENCFF950ANB.bigBed hg19 released mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF738TKN bed narrowPeak optimal idr thresholded peaks ENCSR000EGM ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCF-human ENCAB000AFQ DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF001TDO, ENCFF264LXL, ENCFF545EHA, ENCFF595QHF 905102 ENCODE Processing Pipeline 8635b84f3c5785702257302d4b4b8f8a https://www.encodeproject.org/files/ENCFF738TKN/@@download/ENCFF738TKN.bed.gz hg19 released mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF595QHF bed narrowPeak peaks ENCSR000EGM ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCF-human ENCAB000AFQ DNA see document see document False 2012-05-14 ENCODE 1 ENCFF487UYG, ENCFF710NTS 4688230 ENCODE Processing Pipeline be40a763bd65492b830c3cf768a541ad https://www.encodeproject.org/files/ENCFF595QHF/@@download/ENCFF595QHF.bed.gz hg19 released mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF565FWB bigBed narrowPeak peaks ENCSR000EGM ChIP-seq EFO:0002067 K562 cell line Homo sapiens CTCF-human ENCAB000AFQ DNA see document see document False 2012-05-14 ENCODE 2 ENCFF545EHA 11073252 ENCODE Processing Pipeline 1897be4b2d7d780f0b9f3809b8a5806f https://www.encodeproject.org/files/ENCFF565FWB/@@download/ENCFF565FWB.bigBed hg19 released mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF482ZJO bam unfiltered alignments ENCSR801RPW ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-GTF2A2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 2 100 ENCFF264IWL, ENCFF483AVN, ENCFF807MUK 5918950894 ENCODE Processing Pipeline 4d887252e0b1835d99a1a3483f90905e https://www.encodeproject.org/files/ENCFF482ZJO/@@download/ENCFF482ZJO.bam hg19 released missing genetic modification characterization, mild to moderate bottlenecking ENCFF089QYI bam unfiltered alignments ENCSR801RPW ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-GTF2A2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1 100 ENCFF339NHI, ENCFF677HTA, ENCFF807MUK 9126888997 ENCODE Processing Pipeline a038a3b78d5bc8f869050685a72feba0 https://www.encodeproject.org/files/ENCFF089QYI/@@download/ENCFF089QYI.bam hg19 released missing genetic modification characterization, mild to moderate bottlenecking ENCFF677HTA fastq reads ENCSR801RPW ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-GTF2A2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1 1 100 paired-ended 1 ENCFF339NHI 4270608665 Michael Snyder, Stanford 7c08b910bd627129a2cf01e143b50e21 SRA:SRR5112134 https://www.encodeproject.org/files/ENCFF677HTA/@@download/ENCFF677HTA.fastq.gz Illumina HiSeq 2000 /files/ENCFF598DYO/, /files/ENCFF821AJH/ released missing genetic modification characterization, mild to moderate bottlenecking ENCFF483AVN fastq reads ENCSR801RPW ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-GTF2A2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 2 1 100 paired-ended 1 ENCFF264IWL 2649331300 Michael Snyder, Stanford 812820e65d1b6d0f4a8c4a9c563971e6 SRA:SRR5112133 https://www.encodeproject.org/files/ENCFF483AVN/@@download/ENCFF483AVN.fastq.gz Illumina HiSeq 2000 /files/ENCFF598DYO/, /files/ENCFF821AJH/ released missing genetic modification characterization, mild to moderate bottlenecking ENCFF339NHI fastq reads ENCSR801RPW ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-GTF2A2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1 1 100 paired-ended 2 ENCFF677HTA 4381958095 Michael Snyder, Stanford a774c219825c8b3eb8674b22be272408 SRA:SRR5112134 https://www.encodeproject.org/files/ENCFF339NHI/@@download/ENCFF339NHI.fastq.gz Illumina HiSeq 2000 /files/ENCFF598DYO/, /files/ENCFF821AJH/ released missing genetic modification characterization, mild to moderate bottlenecking ENCFF264IWL fastq reads ENCSR801RPW ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-GTF2A2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 2 1 100 paired-ended 2 ENCFF483AVN 2709264473 Michael Snyder, Stanford b19924622bd07423ad4b4d89d5b56ef0 SRA:SRR5112133 https://www.encodeproject.org/files/ENCFF264IWL/@@download/ENCFF264IWL.fastq.gz Illumina HiSeq 2000 /files/ENCFF598DYO/, /files/ENCFF821AJH/ released missing genetic modification characterization, mild to moderate bottlenecking ENCFF357MEA bam alignments ENCSR801RPW ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-GTF2A2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 2 ENCFF264IWL, ENCFF483AVN, ENCFF807MUK 4811183393 ENCODE Processing Pipeline ce908ce6201031d31874c73bc9e4eedb https://www.encodeproject.org/files/ENCFF357MEA/@@download/ENCFF357MEA.bam hg19 released missing genetic modification characterization, mild to moderate bottlenecking ENCFF658DNV bam alignments ENCSR801RPW ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-GTF2A2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1 ENCFF339NHI, ENCFF677HTA, ENCFF807MUK 6875388800 ENCODE Processing Pipeline 1392a7f04822ded04806efa7fe388c35 https://www.encodeproject.org/files/ENCFF658DNV/@@download/ENCFF658DNV.bam hg19 released missing genetic modification characterization, mild to moderate bottlenecking ENCFF018SHR bigWig signal p-value ENCSR801RPW ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-GTF2A2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 2 ENCFF357MEA, ENCFF523XHJ 1135941254 ENCODE Processing Pipeline c4367b75cc7ddcbd41b17749627c1a39 https://www.encodeproject.org/files/ENCFF018SHR/@@download/ENCFF018SHR.bigWig hg19 released missing genetic modification characterization, mild to moderate bottlenecking ENCFF861LOB bigWig signal p-value ENCSR801RPW ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-GTF2A2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1 ENCFF523XHJ, ENCFF658DNV 1420996044 ENCODE Processing Pipeline 65c1ad4c165113927af29e4b3e4809ec https://www.encodeproject.org/files/ENCFF861LOB/@@download/ENCFF861LOB.bigWig hg19 released missing genetic modification characterization, mild to moderate bottlenecking ENCFF338KGW bigWig fold change over control ENCSR801RPW ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-GTF2A2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 2 ENCFF357MEA, ENCFF523XHJ 1194216338 ENCODE Processing Pipeline 96a50054066533e00cfb7b3493a16d08 https://www.encodeproject.org/files/ENCFF338KGW/@@download/ENCFF338KGW.bigWig hg19 released missing genetic modification characterization, mild to moderate bottlenecking ENCFF608PIL bigBed narrowPeak peaks ENCSR801RPW ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-GTF2A2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1 ENCFF796QIY 13015492 ENCODE Processing Pipeline f676045bdb727bb3af334485ee6ef54d https://www.encodeproject.org/files/ENCFF608PIL/@@download/ENCFF608PIL.bigBed hg19 released missing genetic modification characterization, mild to moderate bottlenecking ENCFF860FHJ bigBed narrowPeak peaks ENCSR801RPW ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-GTF2A2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 2 ENCFF490ZQW 13164982 ENCODE Processing Pipeline 81c896cd64af84fc4bca848bbe6a2aed https://www.encodeproject.org/files/ENCFF860FHJ/@@download/ENCFF860FHJ.bigBed hg19 released missing genetic modification characterization, mild to moderate bottlenecking ENCFF462HYL bigBed narrowPeak conservative idr thresholded peaks ENCSR801RPW ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-GTF2A2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF915SSM 282238 ENCODE Processing Pipeline 960f8844f12aef163cac4985aa100939 https://www.encodeproject.org/files/ENCFF462HYL/@@download/ENCFF462HYL.bigBed hg19 released missing genetic modification characterization, mild to moderate bottlenecking ENCFF741INH bigWig fold change over control ENCSR801RPW ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-GTF2A2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF357MEA, ENCFF523XHJ, ENCFF658DNV 1947758413 ENCODE Processing Pipeline cb9899b97e3a504e4e51604c6fb92bf4 https://www.encodeproject.org/files/ENCFF741INH/@@download/ENCFF741INH.bigWig hg19 released missing genetic modification characterization, mild to moderate bottlenecking ENCFF393WZH bigBed narrowPeak peaks ENCSR801RPW ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-GTF2A2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF124LKA 13028162 ENCODE Processing Pipeline e2c0161de529ae73d1d86de188aeaa9b https://www.encodeproject.org/files/ENCFF393WZH/@@download/ENCFF393WZH.bigBed hg19 released missing genetic modification characterization, mild to moderate bottlenecking ENCFF796QIY bed narrowPeak peaks ENCSR801RPW ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-GTF2A2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1 ENCFF523XHJ, ENCFF658DNV 7178952 ENCODE Processing Pipeline 5947fc9058236a998e643417ae7835fb https://www.encodeproject.org/files/ENCFF796QIY/@@download/ENCFF796QIY.bed.gz hg19 released missing genetic modification characterization, mild to moderate bottlenecking ENCFF915SSM bed narrowPeak conservative idr thresholded peaks ENCSR801RPW ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-GTF2A2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF001TDO, ENCFF124LKA, ENCFF490ZQW, ENCFF796QIY 103537 ENCODE Processing Pipeline 4ef498e594f6dfcbb27bf3a6499dee0c https://www.encodeproject.org/files/ENCFF915SSM/@@download/ENCFF915SSM.bed.gz hg19 released missing genetic modification characterization, mild to moderate bottlenecking ENCFF780UAV bigWig signal p-value ENCSR801RPW ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-GTF2A2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF357MEA, ENCFF523XHJ, ENCFF658DNV 1363160985 ENCODE Processing Pipeline 7eea7d9ce63babfd55f2309055e87b64 https://www.encodeproject.org/files/ENCFF780UAV/@@download/ENCFF780UAV.bigWig hg19 released missing genetic modification characterization, mild to moderate bottlenecking ENCFF852SWA bigWig fold change over control ENCSR801RPW ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-GTF2A2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1 ENCFF523XHJ, ENCFF658DNV 1481381989 ENCODE Processing Pipeline c1a01207df6e4be5ddf7b4c39b68aca3 https://www.encodeproject.org/files/ENCFF852SWA/@@download/ENCFF852SWA.bigWig hg19 released missing genetic modification characterization, mild to moderate bottlenecking ENCFF490ZQW bed narrowPeak peaks ENCSR801RPW ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-GTF2A2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 2 ENCFF357MEA, ENCFF523XHJ 7019384 ENCODE Processing Pipeline e0167fabd2b873b50d51fa3aec537cf9 https://www.encodeproject.org/files/ENCFF490ZQW/@@download/ENCFF490ZQW.bed.gz hg19 released missing genetic modification characterization, mild to moderate bottlenecking ENCFF124LKA bed narrowPeak peaks ENCSR801RPW ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-GTF2A2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF357MEA, ENCFF523XHJ, ENCFF658DNV 7356838 ENCODE Processing Pipeline a17bdc450ae440e43075d17008430cd6 https://www.encodeproject.org/files/ENCFF124LKA/@@download/ENCFF124LKA.bed.gz hg19 released missing genetic modification characterization, mild to moderate bottlenecking ENCFF167HYX bed narrowPeak optimal idr thresholded peaks ENCSR801RPW ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-GTF2A2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF001TDO, ENCFF124LKA, ENCFF490ZQW, ENCFF796QIY 121570 ENCODE Processing Pipeline 38fe13495b413cb9d70bd0c99f9cfa0d https://www.encodeproject.org/files/ENCFF167HYX/@@download/ENCFF167HYX.bed.gz hg19 released missing genetic modification characterization, mild to moderate bottlenecking ENCFF358GKI bigBed narrowPeak optimal idr thresholded peaks ENCSR801RPW ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-GTF2A2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF167HYX 313136 ENCODE Processing Pipeline b1620523b531437783814932e7bf4be1 https://www.encodeproject.org/files/ENCFF358GKI/@@download/ENCFF358GKI.bigBed hg19 released missing genetic modification characterization, mild to moderate bottlenecking ENCFF302XKP bam unfiltered alignments ENCSR801RPW ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-GTF2A2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 2 100 ENCFF264IWL, ENCFF483AVN, ENCFF643CGH 5931177012 ENCODE Processing Pipeline e22f8e6f96aa0c6187d7f86eff905734 https://www.encodeproject.org/files/ENCFF302XKP/@@download/ENCFF302XKP.bam GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking ENCFF679UCS bam unfiltered alignments ENCSR801RPW ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-GTF2A2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1 100 ENCFF339NHI, ENCFF643CGH, ENCFF677HTA 9140677706 ENCODE Processing Pipeline 22aa90fea853ddb940a8a4b2127a9ac9 https://www.encodeproject.org/files/ENCFF679UCS/@@download/ENCFF679UCS.bam GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking ENCFF709ZMI bam alignments ENCSR801RPW ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-GTF2A2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 2 100 ENCFF264IWL, ENCFF483AVN, ENCFF643CGH 4809827254 ENCODE Processing Pipeline 8e18830b20522dec7163746dec0f9a1d https://www.encodeproject.org/files/ENCFF709ZMI/@@download/ENCFF709ZMI.bam GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking ENCFF438XEX bam alignments ENCSR801RPW ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-GTF2A2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1 100 ENCFF339NHI, ENCFF643CGH, ENCFF677HTA 6873743019 ENCODE Processing Pipeline 8de595c9b32b96781443fb0fdb3ead09 https://www.encodeproject.org/files/ENCFF438XEX/@@download/ENCFF438XEX.bam GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking ENCFF710SUG bigWig signal p-value ENCSR801RPW ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-GTF2A2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1 ENCFF438XEX, ENCFF458FYW 1431966137 ENCODE Processing Pipeline 285709bbb1fe7a387b5bc697d115f0b7 https://www.encodeproject.org/files/ENCFF710SUG/@@download/ENCFF710SUG.bigWig GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking ENCFF317HSX bigWig signal p-value ENCSR801RPW ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-GTF2A2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 2 ENCFF458FYW, ENCFF709ZMI 1134157833 ENCODE Processing Pipeline bdc05eaaafc181bbd45c88a9220f0237 https://www.encodeproject.org/files/ENCFF317HSX/@@download/ENCFF317HSX.bigWig GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking ENCFF313KIZ bigWig signal p-value ENCSR801RPW ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-GTF2A2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF438XEX, ENCFF458FYW, ENCFF709ZMI 1383000729 ENCODE Processing Pipeline 932f4861ed2144d824b3cae29711e3bb https://www.encodeproject.org/files/ENCFF313KIZ/@@download/ENCFF313KIZ.bigWig GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking ENCFF735NYL bigWig fold change over control ENCSR801RPW ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-GTF2A2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1 ENCFF438XEX, ENCFF458FYW 1494479226 ENCODE Processing Pipeline cfd9c412a8d2a6252921fcbedd1f7794 https://www.encodeproject.org/files/ENCFF735NYL/@@download/ENCFF735NYL.bigWig GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking ENCFF545JNB bigWig fold change over control ENCSR801RPW ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-GTF2A2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 2 ENCFF458FYW, ENCFF709ZMI 1223711716 ENCODE Processing Pipeline b9466cc887cdfb006854c8b8d5be21da https://www.encodeproject.org/files/ENCFF545JNB/@@download/ENCFF545JNB.bigWig GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking ENCFF128JAV bigWig fold change over control ENCSR801RPW ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-GTF2A2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF438XEX, ENCFF458FYW, ENCFF709ZMI 1971337576 ENCODE Processing Pipeline f42b0fd74624ac2c6301824274afc6cb https://www.encodeproject.org/files/ENCFF128JAV/@@download/ENCFF128JAV.bigWig GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking ENCFF004ADR bed narrowPeak peaks ENCSR801RPW ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-GTF2A2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1 ENCFF438XEX, ENCFF458FYW 7148858 ENCODE Processing Pipeline 6eff4c10b75728f02b9208ac8574bacf https://www.encodeproject.org/files/ENCFF004ADR/@@download/ENCFF004ADR.bed.gz GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking ENCFF975ECG bigBed narrowPeak peaks ENCSR801RPW ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-GTF2A2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 2 ENCFF095RMB 13179040 ENCODE Processing Pipeline 95e63de8a1ac1579d185fa3e06efbba6 https://www.encodeproject.org/files/ENCFF975ECG/@@download/ENCFF975ECG.bigBed GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking ENCFF095RMB bed narrowPeak peaks ENCSR801RPW ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-GTF2A2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 2 ENCFF458FYW, ENCFF709ZMI 6937957 ENCODE Processing Pipeline 4b7ce55c3c11c3a73d4d26bfa26181d6 https://www.encodeproject.org/files/ENCFF095RMB/@@download/ENCFF095RMB.bed.gz GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking ENCFF202BBK bigBed narrowPeak conservative idr thresholded peaks ENCSR801RPW ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-GTF2A2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF950VDB 286312 ENCODE Processing Pipeline e3d5e020adb1ac5387f3f9cdecd535a7 https://www.encodeproject.org/files/ENCFF202BBK/@@download/ENCFF202BBK.bigBed GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking ENCFF839QEL bed narrowPeak optimal idr thresholded peaks ENCSR801RPW ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-GTF2A2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF004ADR, ENCFF095RMB, ENCFF121FFD, ENCFF419RSJ 126672 ENCODE Processing Pipeline 59818792fa40c2c3892123fb99218bb0 https://www.encodeproject.org/files/ENCFF839QEL/@@download/ENCFF839QEL.bed.gz GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking ENCFF848GUQ bigBed narrowPeak optimal idr thresholded peaks ENCSR801RPW ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-GTF2A2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF839QEL 322933 ENCODE Processing Pipeline ce113d7c5b44eb56f9bc60a9346c56cf https://www.encodeproject.org/files/ENCFF848GUQ/@@download/ENCFF848GUQ.bigBed GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking ENCFF121FFD bed narrowPeak peaks ENCSR801RPW ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-GTF2A2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF438XEX, ENCFF458FYW, ENCFF709ZMI 7364037 ENCODE Processing Pipeline b1e72cc7840066f6441c7cb55462b458 https://www.encodeproject.org/files/ENCFF121FFD/@@download/ENCFF121FFD.bed.gz GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking ENCFF103TMK bigBed narrowPeak peaks ENCSR801RPW ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-GTF2A2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1 ENCFF004ADR 13045866 ENCODE Processing Pipeline 3d56ed38095556b607067b6d9cb2a3e0 https://www.encodeproject.org/files/ENCFF103TMK/@@download/ENCFF103TMK.bigBed GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking ENCFF950VDB bed narrowPeak conservative idr thresholded peaks ENCSR801RPW ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-GTF2A2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF004ADR, ENCFF095RMB, ENCFF121FFD, ENCFF419RSJ 105202 ENCODE Processing Pipeline 6dffb6d717979e9bb91ec8730d0aa948 https://www.encodeproject.org/files/ENCFF950VDB/@@download/ENCFF950VDB.bed.gz GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking ENCFF588GIC bigBed narrowPeak peaks ENCSR801RPW ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-GTF2A2-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF121FFD 13048384 ENCODE Processing Pipeline 5576ae1e508c4493a45f7f0df1d86c28 https://www.encodeproject.org/files/ENCFF588GIC/@@download/ENCFF588GIC.bigBed GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking ENCFF147CXN fastq reads ENCSR908CMW ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM1A-human ENCAB753DKR DNA False 2016-09-20 ENCODE 1 1 100 paired-ended 1 ENCFF408SWF 5427059861 Michael Snyder, Stanford d44ba03d9a6ea93e45232b850f036181 SRA:SRR5112250 https://www.encodeproject.org/files/ENCFF147CXN/@@download/ENCFF147CXN.fastq.gz Illumina HiSeq 4000 /files/ENCFF498JMO/ released mild to moderate bottlenecking missing control alignments ENCFF763NMB fastq reads ENCSR908CMW ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM1A-human ENCAB753DKR DNA False 2016-09-20 ENCODE 2 1 100 paired-ended 2 ENCFF263QAS 3680927525 Michael Snyder, Stanford 2af1204080f2dc47e3dc6e4dae08ac16 SRA:SRR5112249 https://www.encodeproject.org/files/ENCFF763NMB/@@download/ENCFF763NMB.fastq.gz Illumina HiSeq 4000 /files/ENCFF837MIV/ released mild to moderate bottlenecking missing control alignments ENCFF263QAS fastq reads ENCSR908CMW ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM1A-human ENCAB753DKR DNA False 2016-09-20 ENCODE 2 1 100 paired-ended 1 ENCFF763NMB 3376546762 Michael Snyder, Stanford 15aaef0cfdba7b252abd3757a312c4c4 SRA:SRR5112249 https://www.encodeproject.org/files/ENCFF263QAS/@@download/ENCFF263QAS.fastq.gz Illumina HiSeq 4000 /files/ENCFF259GQA/ released mild to moderate bottlenecking missing control alignments ENCFF408SWF fastq reads ENCSR908CMW ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM1A-human ENCAB753DKR DNA False 2016-09-20 ENCODE 1 1 100 paired-ended 2 ENCFF147CXN 5895496528 Michael Snyder, Stanford 493e3e49753b56046bfb99bb2bdb5aef SRA:SRR5112250 https://www.encodeproject.org/files/ENCFF408SWF/@@download/ENCFF408SWF.fastq.gz Illumina HiSeq 4000 /files/ENCFF502GTS/ released mild to moderate bottlenecking missing control alignments ENCFF844OKB bam unfiltered alignments ENCSR908CMW ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM1A-human ENCAB753DKR DNA False 2016-09-20 ENCODE 2 100 ENCFF263QAS, ENCFF763NMB, ENCFF807MUK 6821563587 ENCODE Processing Pipeline 3255d5eb9862d567aadad5d195c96e6d https://www.encodeproject.org/files/ENCFF844OKB/@@download/ENCFF844OKB.bam hg19 released mild to moderate bottlenecking missing control alignments ENCFF916XXF bam unfiltered alignments ENCSR908CMW ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM1A-human ENCAB753DKR DNA False 2016-09-20 ENCODE 2 100 ENCFF263QAS, ENCFF643CGH, ENCFF763NMB 6828086543 ENCODE Processing Pipeline 2bea7e9658fff8938446d11eddc15a6b https://www.encodeproject.org/files/ENCFF916XXF/@@download/ENCFF916XXF.bam GRCh38 released mild to moderate bottlenecking missing control alignments ENCFF392ICN bam unfiltered alignments ENCSR908CMW ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM1A-human ENCAB753DKR DNA False 2016-09-20 ENCODE 1 100 ENCFF147CXN, ENCFF408SWF, ENCFF643CGH 10238070057 ENCODE Processing Pipeline 229459b771d70303ed5680109304164b https://www.encodeproject.org/files/ENCFF392ICN/@@download/ENCFF392ICN.bam GRCh38 released mild to moderate bottlenecking missing control alignments ENCFF617WID bam unfiltered alignments ENCSR908CMW ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM1A-human ENCAB753DKR DNA False 2016-09-20 ENCODE 1 100 ENCFF147CXN, ENCFF408SWF, ENCFF807MUK 10230808957 ENCODE Processing Pipeline e083f01dae6d7e3712c2958de6a7e396 https://www.encodeproject.org/files/ENCFF617WID/@@download/ENCFF617WID.bam hg19 released mild to moderate bottlenecking missing control alignments ENCFF819KCS bam alignments ENCSR908CMW ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM1A-human ENCAB753DKR DNA False 2016-09-20 ENCODE 2 100 ENCFF263QAS, ENCFF763NMB, ENCFF807MUK 4767066108 ENCODE Processing Pipeline 9b2a438e5fa80a2b7851b7cd515f9b72 https://www.encodeproject.org/files/ENCFF819KCS/@@download/ENCFF819KCS.bam hg19 released mild to moderate bottlenecking missing control alignments ENCFF008IZS bam alignments ENCSR908CMW ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM1A-human ENCAB753DKR DNA False 2016-09-20 ENCODE 2 100 ENCFF263QAS, ENCFF643CGH, ENCFF763NMB 4771040275 ENCODE Processing Pipeline 4bb127af9ab8944560b7b535a5e40379 https://www.encodeproject.org/files/ENCFF008IZS/@@download/ENCFF008IZS.bam GRCh38 released mild to moderate bottlenecking missing control alignments ENCFF599IYT bam alignments ENCSR908CMW ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM1A-human ENCAB753DKR DNA False 2016-09-20 ENCODE 1 100 ENCFF147CXN, ENCFF408SWF, ENCFF643CGH 7686577584 ENCODE Processing Pipeline 938c9bc96c10906530aef62d7b5d5b31 https://www.encodeproject.org/files/ENCFF599IYT/@@download/ENCFF599IYT.bam GRCh38 released mild to moderate bottlenecking missing control alignments ENCFF608UCM bam alignments ENCSR908CMW ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM1A-human ENCAB753DKR DNA False 2016-09-20 ENCODE 1 100 ENCFF147CXN, ENCFF408SWF, ENCFF807MUK 7679608075 ENCODE Processing Pipeline da204060db0252c562ecc7488bfdc27b https://www.encodeproject.org/files/ENCFF608UCM/@@download/ENCFF608UCM.bam hg19 released mild to moderate bottlenecking missing control alignments ENCFF587WFG bigWig signal p-value ENCSR908CMW ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM1A-human ENCAB753DKR DNA False 2016-09-20 ENCODE 1 ENCFF160VXC, ENCFF608UCM, ENCFF834TUP 1979215841 ENCODE Processing Pipeline f1631f1176c44cf6f4a470825e4a0e8d https://www.encodeproject.org/files/ENCFF587WFG/@@download/ENCFF587WFG.bigWig hg19 released mild to moderate bottlenecking missing control alignments ENCFF561CRM bigWig signal p-value ENCSR908CMW ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM1A-human ENCAB753DKR DNA False 2016-09-20 ENCODE 2 ENCFF819KCS, ENCFF834TUP 1361637180 ENCODE Processing Pipeline df15a4e9c5f217a121f74049b7397eaa https://www.encodeproject.org/files/ENCFF561CRM/@@download/ENCFF561CRM.bigWig hg19 released mild to moderate bottlenecking missing control alignments ENCFF765XCJ bigWig signal p-value ENCSR908CMW ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM1A-human ENCAB753DKR DNA False 2016-09-20 ENCODE 1, 2 ENCFF160VXC, ENCFF608UCM, ENCFF819KCS, ENCFF834TUP 2432713591 ENCODE Processing Pipeline 3ebea5e005bf2cb547cee629f3483564 https://www.encodeproject.org/files/ENCFF765XCJ/@@download/ENCFF765XCJ.bigWig hg19 released mild to moderate bottlenecking missing control alignments ENCFF105LNX bigWig fold change over control ENCSR908CMW ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM1A-human ENCAB753DKR DNA False 2016-09-20 ENCODE 1 ENCFF160VXC, ENCFF608UCM, ENCFF834TUP 2352780464 ENCODE Processing Pipeline 1044ab6398b91e8a5ab8dcb2a55f12e9 https://www.encodeproject.org/files/ENCFF105LNX/@@download/ENCFF105LNX.bigWig hg19 released mild to moderate bottlenecking missing control alignments ENCFF727IES bigWig fold change over control ENCSR908CMW ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM1A-human ENCAB753DKR DNA False 2016-09-20 ENCODE 2 ENCFF819KCS, ENCFF834TUP 1456771274 ENCODE Processing Pipeline e442cadb7e3af28222dff9bb654b6cf2 https://www.encodeproject.org/files/ENCFF727IES/@@download/ENCFF727IES.bigWig hg19 released mild to moderate bottlenecking missing control alignments ENCFF734YKJ bigWig fold change over control ENCSR908CMW ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM1A-human ENCAB753DKR DNA False 2016-09-20 ENCODE 1, 2 ENCFF160VXC, ENCFF608UCM, ENCFF819KCS, ENCFF834TUP 2833944338 ENCODE Processing Pipeline dfdc4fcba5e75d964d2b83224d1ebf61 https://www.encodeproject.org/files/ENCFF734YKJ/@@download/ENCFF734YKJ.bigWig hg19 released mild to moderate bottlenecking missing control alignments ENCFF799KLQ bed narrowPeak peaks ENCSR908CMW ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM1A-human ENCAB753DKR DNA False 2016-09-20 ENCODE 1 ENCFF160VXC, ENCFF608UCM, ENCFF834TUP 7302595 ENCODE Processing Pipeline 0da9304d515c27247d0165e6bc65ba65 https://www.encodeproject.org/files/ENCFF799KLQ/@@download/ENCFF799KLQ.bed.gz hg19 released mild to moderate bottlenecking missing control alignments ENCFF797FYJ bed narrowPeak peaks ENCSR908CMW ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM1A-human ENCAB753DKR DNA False 2016-09-20 ENCODE 2 ENCFF819KCS, ENCFF834TUP 7147454 ENCODE Processing Pipeline 9b5870a34fff2d07acf06a7e8eb58f90 https://www.encodeproject.org/files/ENCFF797FYJ/@@download/ENCFF797FYJ.bed.gz hg19 released mild to moderate bottlenecking missing control alignments ENCFF770MXX bed narrowPeak peaks ENCSR908CMW ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM1A-human ENCAB753DKR DNA False 2016-09-20 ENCODE 1, 2 ENCFF160VXC, ENCFF608UCM, ENCFF819KCS, ENCFF834TUP 7328583 ENCODE Processing Pipeline 761e4c1c347141bdfc481974a4d75db7 https://www.encodeproject.org/files/ENCFF770MXX/@@download/ENCFF770MXX.bed.gz hg19 released mild to moderate bottlenecking missing control alignments ENCFF299GZN bigBed narrowPeak peaks ENCSR908CMW ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM1A-human ENCAB753DKR DNA False 2016-09-20 ENCODE 2 ENCFF797FYJ 13202225 ENCODE Processing Pipeline cb1d28fe6284eeade3e0ac4a4b361c4b https://www.encodeproject.org/files/ENCFF299GZN/@@download/ENCFF299GZN.bigBed hg19 released mild to moderate bottlenecking missing control alignments ENCFF527MZO bigBed narrowPeak peaks ENCSR908CMW ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM1A-human ENCAB753DKR DNA False 2016-09-20 ENCODE 1 ENCFF799KLQ 13243766 ENCODE Processing Pipeline 6ac3450136c05bc2a45e8151e61fb642 https://www.encodeproject.org/files/ENCFF527MZO/@@download/ENCFF527MZO.bigBed hg19 released mild to moderate bottlenecking missing control alignments ENCFF371XPD bigBed narrowPeak peaks ENCSR908CMW ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM1A-human ENCAB753DKR DNA False 2016-09-20 ENCODE 1, 2 ENCFF770MXX 13249171 ENCODE Processing Pipeline b597119640def01682949696a42ec0b3 https://www.encodeproject.org/files/ENCFF371XPD/@@download/ENCFF371XPD.bigBed hg19 released mild to moderate bottlenecking missing control alignments ENCFF526UKS bed narrowPeak conservative idr thresholded peaks ENCSR908CMW ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM1A-human ENCAB753DKR DNA False 2016-09-20 ENCODE 1, 2 ENCFF001TDO, ENCFF770MXX, ENCFF797FYJ, ENCFF799KLQ 693900 ENCODE Processing Pipeline ce905593eb0cabf7dfedb1ec5f13ea07 https://www.encodeproject.org/files/ENCFF526UKS/@@download/ENCFF526UKS.bed.gz hg19 released mild to moderate bottlenecking missing control alignments ENCFF738WCE bed narrowPeak optimal idr thresholded peaks ENCSR908CMW ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM1A-human ENCAB753DKR DNA False 2016-09-20 ENCODE 1, 2 ENCFF001TDO, ENCFF770MXX, ENCFF797FYJ, ENCFF799KLQ 836134 ENCODE Processing Pipeline f68cd3bad39ffbc3f6ceba8dd9405852 https://www.encodeproject.org/files/ENCFF738WCE/@@download/ENCFF738WCE.bed.gz hg19 released mild to moderate bottlenecking missing control alignments ENCFF244QEW bigBed narrowPeak conservative idr thresholded peaks ENCSR908CMW ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM1A-human ENCAB753DKR DNA False 2016-09-20 ENCODE 1, 2 ENCFF526UKS 1273378 ENCODE Processing Pipeline ca0f75663fb397612f809ca7ee827e8c https://www.encodeproject.org/files/ENCFF244QEW/@@download/ENCFF244QEW.bigBed hg19 released mild to moderate bottlenecking missing control alignments ENCFF238HAS bigBed narrowPeak optimal idr thresholded peaks ENCSR908CMW ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM1A-human ENCAB753DKR DNA False 2016-09-20 ENCODE 1, 2 ENCFF738WCE 1483174 ENCODE Processing Pipeline 0aa1e8a0f12c3c9ffc1c02341ba54374 https://www.encodeproject.org/files/ENCFF238HAS/@@download/ENCFF238HAS.bigBed hg19 released mild to moderate bottlenecking missing control alignments ENCFF404PYP bigWig signal p-value ENCSR908CMW ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM1A-human ENCAB753DKR DNA False 2016-09-20 ENCODE 1 ENCFF599IYT 2251070215 ENCODE Processing Pipeline 7da557bbf7f66cfd6ad543e9e1eacb9f https://www.encodeproject.org/files/ENCFF404PYP/@@download/ENCFF404PYP.bigWig GRCh38 released mild to moderate bottlenecking missing control alignments ENCFF881ECN bigWig signal p-value ENCSR908CMW ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM1A-human ENCAB753DKR DNA False 2016-09-20 ENCODE 2 ENCFF008IZS 1406056276 ENCODE Processing Pipeline 7542368a0416d0180366620bf4d48702 https://www.encodeproject.org/files/ENCFF881ECN/@@download/ENCFF881ECN.bigWig GRCh38 released mild to moderate bottlenecking missing control alignments ENCFF889DZH bigWig fold change over control ENCSR908CMW ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM1A-human ENCAB753DKR DNA False 2016-09-20 ENCODE 1 ENCFF599IYT 2387405823 ENCODE Processing Pipeline f7dac143d90f7f560af466cd53837889 https://www.encodeproject.org/files/ENCFF889DZH/@@download/ENCFF889DZH.bigWig GRCh38 released mild to moderate bottlenecking missing control alignments ENCFF946PQW bigWig fold change over control ENCSR908CMW ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM1A-human ENCAB753DKR DNA False 2016-09-20 ENCODE 2 ENCFF008IZS 1466803695 ENCODE Processing Pipeline 5b8ce4accd54210b6cc47e6cda5f1b56 https://www.encodeproject.org/files/ENCFF946PQW/@@download/ENCFF946PQW.bigWig GRCh38 released mild to moderate bottlenecking missing control alignments ENCFF900ZKJ bigWig fold change over control ENCSR908CMW ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM1A-human ENCAB753DKR DNA False 2016-09-20 ENCODE 1, 2 ENCFF008IZS, ENCFF599IYT 2811697999 ENCODE Processing Pipeline f60adf72c64b3bd99a1efac801bea93b https://www.encodeproject.org/files/ENCFF900ZKJ/@@download/ENCFF900ZKJ.bigWig GRCh38 released mild to moderate bottlenecking missing control alignments ENCFF453CHS bed narrowPeak peaks ENCSR908CMW ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM1A-human ENCAB753DKR DNA False 2016-09-20 ENCODE 1, 2 ENCFF008IZS, ENCFF599IYT 7333070 ENCODE Processing Pipeline f249d5625433af4a976b488343574dd2 https://www.encodeproject.org/files/ENCFF453CHS/@@download/ENCFF453CHS.bed.gz GRCh38 released mild to moderate bottlenecking missing control alignments ENCFF796VMI bed narrowPeak optimal idr thresholded peaks ENCSR908CMW ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM1A-human ENCAB753DKR DNA False 2016-09-20 ENCODE 1, 2 ENCFF313FVM, ENCFF378FXV, ENCFF419RSJ, ENCFF453CHS 840969 ENCODE Processing Pipeline cc84cf4b01776c9894610ffbf9bb953c https://www.encodeproject.org/files/ENCFF796VMI/@@download/ENCFF796VMI.bed.gz GRCh38 released mild to moderate bottlenecking missing control alignments ENCFF453IHK bigBed narrowPeak peaks ENCSR908CMW ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM1A-human ENCAB753DKR DNA False 2016-09-20 ENCODE 2 ENCFF378FXV 13186400 ENCODE Processing Pipeline 8a3e1c06be33078490a69517a263d300 https://www.encodeproject.org/files/ENCFF453IHK/@@download/ENCFF453IHK.bigBed GRCh38 released mild to moderate bottlenecking missing control alignments ENCFF136IOI bigBed narrowPeak peaks ENCSR908CMW ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM1A-human ENCAB753DKR DNA False 2016-09-20 ENCODE 1, 2 ENCFF453CHS 13258646 ENCODE Processing Pipeline fc7e2d40c2a7954eadf391c930eac104 https://www.encodeproject.org/files/ENCFF136IOI/@@download/ENCFF136IOI.bigBed GRCh38 released mild to moderate bottlenecking missing control alignments ENCFF313FVM bed narrowPeak peaks ENCSR908CMW ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM1A-human ENCAB753DKR DNA False 2016-09-20 ENCODE 1 ENCFF599IYT 7318009 ENCODE Processing Pipeline c1d61ac32bdbaa9c41150ab4a4388a0d https://www.encodeproject.org/files/ENCFF313FVM/@@download/ENCFF313FVM.bed.gz GRCh38 released mild to moderate bottlenecking missing control alignments ENCFF693ORN bigBed narrowPeak conservative idr thresholded peaks ENCSR908CMW ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM1A-human ENCAB753DKR DNA False 2016-09-20 ENCODE 1, 2 ENCFF605VXL 1277213 ENCODE Processing Pipeline 0aae34e3aa7af1f5f632060958013542 https://www.encodeproject.org/files/ENCFF693ORN/@@download/ENCFF693ORN.bigBed GRCh38 released mild to moderate bottlenecking missing control alignments ENCFF378FXV bed narrowPeak peaks ENCSR908CMW ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM1A-human ENCAB753DKR DNA False 2016-09-20 ENCODE 2 ENCFF008IZS 7078808 ENCODE Processing Pipeline 11e8adb2acbef5974b773d997816d254 https://www.encodeproject.org/files/ENCFF378FXV/@@download/ENCFF378FXV.bed.gz GRCh38 released mild to moderate bottlenecking missing control alignments ENCFF605VXL bed narrowPeak conservative idr thresholded peaks ENCSR908CMW ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM1A-human ENCAB753DKR DNA False 2016-09-20 ENCODE 1, 2 ENCFF313FVM, ENCFF378FXV, ENCFF419RSJ, ENCFF453CHS 695567 ENCODE Processing Pipeline cc32f60d69be7cc808e508a6a9ae9879 https://www.encodeproject.org/files/ENCFF605VXL/@@download/ENCFF605VXL.bed.gz GRCh38 released mild to moderate bottlenecking missing control alignments ENCFF281WRG bigBed narrowPeak peaks ENCSR908CMW ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM1A-human ENCAB753DKR DNA False 2016-09-20 ENCODE 1 ENCFF313FVM 13270058 ENCODE Processing Pipeline c5c361eb5709a4e59a5cae7407074f80 https://www.encodeproject.org/files/ENCFF281WRG/@@download/ENCFF281WRG.bigBed GRCh38 released mild to moderate bottlenecking missing control alignments ENCFF966QQR bigBed narrowPeak optimal idr thresholded peaks ENCSR908CMW ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM1A-human ENCAB753DKR DNA False 2016-09-20 ENCODE 1, 2 ENCFF796VMI 1491390 ENCODE Processing Pipeline 0a234fdfd653a166352c29db906c7f9a https://www.encodeproject.org/files/ENCFF966QQR/@@download/ENCFF966QQR.bigBed GRCh38 released mild to moderate bottlenecking missing control alignments ENCFF306NFN bigWig signal p-value ENCSR908CMW ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM1A-human ENCAB753DKR DNA False 2016-09-20 ENCODE 1, 2 ENCFF008IZS, ENCFF599IYT 2410763873 ENCODE Processing Pipeline 6f7c389d27f39e8b59832e3ff706a4e9 https://www.encodeproject.org/files/ENCFF306NFN/@@download/ENCFF306NFN.bigWig GRCh38 released mild to moderate bottlenecking missing control alignments ENCFF760LCQ fastq reads ENCSR130PDE ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NR4A1-human ENCAB728YTO DNA False 2016-09-01 ENCODE 1 1 100 paired-ended 1 ENCFF681PIN 4709682270 Michael Snyder, Stanford a5e1a3a387a499e6f03a918fdef39b0c SRA:SRR5111172 https://www.encodeproject.org/files/ENCFF760LCQ/@@download/ENCFF760LCQ.fastq.gz Illumina HiSeq 2000 /files/ENCFF236YCR/ released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF681PIN fastq reads ENCSR130PDE ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NR4A1-human ENCAB728YTO DNA False 2016-09-01 ENCODE 1 1 100 paired-ended 2 ENCFF760LCQ 4808139370 Michael Snyder, Stanford bb7a43f863d4f276a00be5f74eb31714 SRA:SRR5111172 https://www.encodeproject.org/files/ENCFF681PIN/@@download/ENCFF681PIN.fastq.gz Illumina HiSeq 2000 /files/ENCFF113QAJ/ released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF301GRJ fastq reads ENCSR130PDE ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NR4A1-human ENCAB728YTO DNA False 2016-09-01 ENCODE 2 1 100 paired-ended 2 ENCFF671VDI 5093519411 Michael Snyder, Stanford 6d59a9dcd5562c4a7f79f43ed4a93bb9 SRA:SRR5111171 https://www.encodeproject.org/files/ENCFF301GRJ/@@download/ENCFF301GRJ.fastq.gz Illumina HiSeq 2000 /files/ENCFF113QAJ/ released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF671VDI fastq reads ENCSR130PDE ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NR4A1-human ENCAB728YTO DNA False 2016-09-01 ENCODE 2 1 100 paired-ended 1 ENCFF301GRJ 5016866400 Michael Snyder, Stanford 67607cc20060adda9913fbe23bc6a0ee SRA:SRR5111171 https://www.encodeproject.org/files/ENCFF671VDI/@@download/ENCFF671VDI.fastq.gz Illumina HiSeq 2000 /files/ENCFF236YCR/ released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF810QEF bam unfiltered alignments ENCSR130PDE ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NR4A1-human ENCAB728YTO DNA False 2016-09-01 ENCODE 2 100 ENCFF301GRJ, ENCFF643CGH, ENCFF671VDI 9947197970 ENCODE Processing Pipeline 721b9e7ffa7c1de1de1323ac3c40b666 https://www.encodeproject.org/files/ENCFF810QEF/@@download/ENCFF810QEF.bam GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF237ZDR bam unfiltered alignments ENCSR130PDE ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NR4A1-human ENCAB728YTO DNA False 2016-09-01 ENCODE 1 100 ENCFF643CGH, ENCFF681PIN, ENCFF760LCQ 9512516676 ENCODE Processing Pipeline 610080e0e7501a9aa62f4fc6da5b16d6 https://www.encodeproject.org/files/ENCFF237ZDR/@@download/ENCFF237ZDR.bam GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF908PSF bam alignments ENCSR130PDE ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NR4A1-human ENCAB728YTO DNA False 2016-09-01 ENCODE 2 100 ENCFF301GRJ, ENCFF643CGH, ENCFF671VDI 4943284835 ENCODE Processing Pipeline 53b2b92154aa27a57f1aeafacbbe49f5 https://www.encodeproject.org/files/ENCFF908PSF/@@download/ENCFF908PSF.bam GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF786GEU bam alignments ENCSR130PDE ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NR4A1-human ENCAB728YTO DNA False 2016-09-01 ENCODE 1 100 ENCFF643CGH, ENCFF681PIN, ENCFF760LCQ 5239368489 ENCODE Processing Pipeline b8e11b22441b5e9426aebdd17c9a0ad5 https://www.encodeproject.org/files/ENCFF786GEU/@@download/ENCFF786GEU.bam GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF408CVK bam unfiltered alignments ENCSR130PDE ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NR4A1-human ENCAB728YTO DNA False 2016-09-01 ENCODE 1 100 ENCFF681PIN, ENCFF760LCQ, ENCFF807MUK 9510898074 ENCODE Processing Pipeline f76a337a6da5b419137659f64d9457fe https://www.encodeproject.org/files/ENCFF408CVK/@@download/ENCFF408CVK.bam hg19 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF611JAR bam unfiltered alignments ENCSR130PDE ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NR4A1-human ENCAB728YTO DNA False 2016-09-01 ENCODE 2 100 ENCFF301GRJ, ENCFF671VDI, ENCFF807MUK 9949072793 ENCODE Processing Pipeline 8f07b982fe360e95a5f87116e2f95be1 https://www.encodeproject.org/files/ENCFF611JAR/@@download/ENCFF611JAR.bam hg19 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF946QHS bam alignments ENCSR130PDE ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NR4A1-human ENCAB728YTO DNA False 2016-09-01 ENCODE 1 100 ENCFF681PIN, ENCFF760LCQ, ENCFF807MUK 5237217688 ENCODE Processing Pipeline 332940efc9d891bd23175438c4ea6f38 https://www.encodeproject.org/files/ENCFF946QHS/@@download/ENCFF946QHS.bam hg19 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF926NTQ bam alignments ENCSR130PDE ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NR4A1-human ENCAB728YTO DNA False 2016-09-01 ENCODE 2 100 ENCFF301GRJ, ENCFF671VDI, ENCFF807MUK 4941656595 ENCODE Processing Pipeline e29dc92d9c3ed4ab2b3796d531643f0f https://www.encodeproject.org/files/ENCFF926NTQ/@@download/ENCFF926NTQ.bam hg19 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF017EUL bigWig signal p-value ENCSR130PDE ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NR4A1-human ENCAB728YTO DNA False 2016-09-01 ENCODE 1 ENCFF194ZKK, ENCFF946QHS 937159876 ENCODE Processing Pipeline 752a83b0375b9aa1bd254fc94ccf2a3a https://www.encodeproject.org/files/ENCFF017EUL/@@download/ENCFF017EUL.bigWig hg19 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF122VXS bigWig signal p-value ENCSR130PDE ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NR4A1-human ENCAB728YTO DNA False 2016-09-01 ENCODE 2 ENCFF194ZKK, ENCFF926NTQ 1031770028 ENCODE Processing Pipeline c5ff7aba17e484d653298e1111bf7fd9 https://www.encodeproject.org/files/ENCFF122VXS/@@download/ENCFF122VXS.bigWig hg19 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF578QDL bigWig signal p-value ENCSR130PDE ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NR4A1-human ENCAB728YTO DNA False 2016-09-01 ENCODE 1, 2 ENCFF194ZKK, ENCFF926NTQ, ENCFF946QHS 1307017371 ENCODE Processing Pipeline 26025295df96c3a5a8214d51fb053b06 https://www.encodeproject.org/files/ENCFF578QDL/@@download/ENCFF578QDL.bigWig hg19 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF840IQJ bigWig fold change over control ENCSR130PDE ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NR4A1-human ENCAB728YTO DNA False 2016-09-01 ENCODE 1 ENCFF194ZKK, ENCFF946QHS 1219621706 ENCODE Processing Pipeline a76f6ef76f718da29185e9b292925d58 https://www.encodeproject.org/files/ENCFF840IQJ/@@download/ENCFF840IQJ.bigWig hg19 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF616AYR bigWig fold change over control ENCSR130PDE ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NR4A1-human ENCAB728YTO DNA False 2016-09-01 ENCODE 2 ENCFF194ZKK, ENCFF926NTQ 1147919758 ENCODE Processing Pipeline 3b8bf49a708945a29755d636d19954f9 https://www.encodeproject.org/files/ENCFF616AYR/@@download/ENCFF616AYR.bigWig hg19 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF040AXK bigWig fold change over control ENCSR130PDE ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NR4A1-human ENCAB728YTO DNA False 2016-09-01 ENCODE 1, 2 ENCFF194ZKK, ENCFF926NTQ, ENCFF946QHS 1779273450 ENCODE Processing Pipeline 9808b01f3d300da7b1e0f86d0112db63 https://www.encodeproject.org/files/ENCFF040AXK/@@download/ENCFF040AXK.bigWig hg19 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF317YJY bed narrowPeak peaks ENCSR130PDE ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NR4A1-human ENCAB728YTO DNA False 2016-09-01 ENCODE 1 ENCFF194ZKK, ENCFF946QHS 6910926 ENCODE Processing Pipeline bc842742eea8b78ce621aa042251e9e5 https://www.encodeproject.org/files/ENCFF317YJY/@@download/ENCFF317YJY.bed.gz hg19 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF090MIJ bed narrowPeak peaks ENCSR130PDE ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NR4A1-human ENCAB728YTO DNA False 2016-09-01 ENCODE 2 ENCFF194ZKK, ENCFF926NTQ 6779574 ENCODE Processing Pipeline 76f18f74c6f5c1d498ea8e93cac8bd80 https://www.encodeproject.org/files/ENCFF090MIJ/@@download/ENCFF090MIJ.bed.gz hg19 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF319MZU bed narrowPeak peaks ENCSR130PDE ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NR4A1-human ENCAB728YTO DNA False 2016-09-01 ENCODE 1, 2 ENCFF194ZKK, ENCFF926NTQ, ENCFF946QHS 7277111 ENCODE Processing Pipeline f2fde630471c906bf9bf9899216f9439 https://www.encodeproject.org/files/ENCFF319MZU/@@download/ENCFF319MZU.bed.gz hg19 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF697YNS bigBed narrowPeak peaks ENCSR130PDE ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NR4A1-human ENCAB728YTO DNA False 2016-09-01 ENCODE 1 ENCFF317YJY 13168984 ENCODE Processing Pipeline 6e8beb4c8895edb93afef1ca2457c537 https://www.encodeproject.org/files/ENCFF697YNS/@@download/ENCFF697YNS.bigBed hg19 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF538LCU bigBed narrowPeak peaks ENCSR130PDE ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NR4A1-human ENCAB728YTO DNA False 2016-09-01 ENCODE 2 ENCFF090MIJ 13185422 ENCODE Processing Pipeline 5a2a89800bab38f9facfe8c7054a7e42 https://www.encodeproject.org/files/ENCFF538LCU/@@download/ENCFF538LCU.bigBed hg19 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF659NTS bigBed narrowPeak peaks ENCSR130PDE ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NR4A1-human ENCAB728YTO DNA False 2016-09-01 ENCODE 1, 2 ENCFF319MZU 13075249 ENCODE Processing Pipeline e6c984a40bfaa98149c1200465641738 https://www.encodeproject.org/files/ENCFF659NTS/@@download/ENCFF659NTS.bigBed hg19 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF837QOK bed narrowPeak conservative idr thresholded peaks ENCSR130PDE ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NR4A1-human ENCAB728YTO DNA False 2016-09-01 ENCODE 1, 2 ENCFF001TDO, ENCFF090MIJ, ENCFF317YJY, ENCFF319MZU 285691 ENCODE Processing Pipeline b30e85edba612b39d8afdc6536d78f53 https://www.encodeproject.org/files/ENCFF837QOK/@@download/ENCFF837QOK.bed.gz hg19 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF044MKB bigBed narrowPeak conservative idr thresholded peaks ENCSR130PDE ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NR4A1-human ENCAB728YTO DNA False 2016-09-01 ENCODE 1, 2 ENCFF837QOK 688126 ENCODE Processing Pipeline 9e1bf4edfc54301b5f10f2ae0d1486e5 https://www.encodeproject.org/files/ENCFF044MKB/@@download/ENCFF044MKB.bigBed hg19 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF859NPS bed narrowPeak optimal idr thresholded peaks ENCSR130PDE ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NR4A1-human ENCAB728YTO DNA False 2016-09-01 ENCODE 1, 2 ENCFF001TDO, ENCFF090MIJ, ENCFF317YJY, ENCFF319MZU 384718 ENCODE Processing Pipeline 1fbe7c256ff4719ad463455c1b853fa6 https://www.encodeproject.org/files/ENCFF859NPS/@@download/ENCFF859NPS.bed.gz hg19 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF131FTY bigBed narrowPeak optimal idr thresholded peaks ENCSR130PDE ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NR4A1-human ENCAB728YTO DNA False 2016-09-01 ENCODE 1, 2 ENCFF859NPS 872155 ENCODE Processing Pipeline 3c7c88bce55643da0fc6d92f704afa7a https://www.encodeproject.org/files/ENCFF131FTY/@@download/ENCFF131FTY.bigBed hg19 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF226SMB bigWig signal p-value ENCSR130PDE ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NR4A1-human ENCAB728YTO DNA False 2016-09-01 ENCODE 1 ENCFF276OII, ENCFF786GEU 1149732861 ENCODE Processing Pipeline 17a830df3465e2d0c12b26938069e970 https://www.encodeproject.org/files/ENCFF226SMB/@@download/ENCFF226SMB.bigWig GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF742TSW bigWig signal p-value ENCSR130PDE ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NR4A1-human ENCAB728YTO DNA False 2016-09-01 ENCODE 2 ENCFF276OII, ENCFF908PSF 1236552540 ENCODE Processing Pipeline 8ca15ee097dc25c9ffbeee2db10953d7 https://www.encodeproject.org/files/ENCFF742TSW/@@download/ENCFF742TSW.bigWig GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF107JGG bigWig signal p-value ENCSR130PDE ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NR4A1-human ENCAB728YTO DNA False 2016-09-01 ENCODE 1, 2 ENCFF276OII, ENCFF786GEU, ENCFF908PSF 1308193025 ENCODE Processing Pipeline b0be2585f326610f3383d00488e085fc https://www.encodeproject.org/files/ENCFF107JGG/@@download/ENCFF107JGG.bigWig GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF091ZKY bigWig fold change over control ENCSR130PDE ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NR4A1-human ENCAB728YTO DNA False 2016-09-01 ENCODE 1 ENCFF276OII, ENCFF786GEU 1210900930 ENCODE Processing Pipeline f87d2f0397314e9755271c22206d91a2 https://www.encodeproject.org/files/ENCFF091ZKY/@@download/ENCFF091ZKY.bigWig GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF600XSQ bigWig fold change over control ENCSR130PDE ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NR4A1-human ENCAB728YTO DNA False 2016-09-01 ENCODE 2 ENCFF276OII, ENCFF908PSF 1145571038 ENCODE Processing Pipeline 4b2b0e9cfcf2de8f254fabaf37ab32ea https://www.encodeproject.org/files/ENCFF600XSQ/@@download/ENCFF600XSQ.bigWig GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF204RHD bigWig fold change over control ENCSR130PDE ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NR4A1-human ENCAB728YTO DNA False 2016-09-01 ENCODE 1, 2 ENCFF276OII, ENCFF786GEU, ENCFF908PSF 1780833372 ENCODE Processing Pipeline 55843213744c910b235332ec5afa6278 https://www.encodeproject.org/files/ENCFF204RHD/@@download/ENCFF204RHD.bigWig GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF299KOW bed narrowPeak peaks ENCSR130PDE ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NR4A1-human ENCAB728YTO DNA False 2016-09-01 ENCODE 2 ENCFF276OII, ENCFF908PSF 6688176 ENCODE Processing Pipeline f676b20ce412da6e8b9e340d7f53da69 https://www.encodeproject.org/files/ENCFF299KOW/@@download/ENCFF299KOW.bed.gz GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF690WII bed narrowPeak peaks ENCSR130PDE ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NR4A1-human ENCAB728YTO DNA False 2016-09-01 ENCODE 1 ENCFF276OII, ENCFF786GEU 6814944 ENCODE Processing Pipeline 5e99e3c6e54adee64d4b1d570f283d5b https://www.encodeproject.org/files/ENCFF690WII/@@download/ENCFF690WII.bed.gz GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF475VMR bed narrowPeak optimal idr thresholded peaks ENCSR130PDE ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NR4A1-human ENCAB728YTO DNA False 2016-09-01 ENCODE 1, 2 ENCFF299KOW, ENCFF419RSJ, ENCFF690WII, ENCFF818TCS 393206 ENCODE Processing Pipeline ea26658f9dc7224f020f0594840f0d6a https://www.encodeproject.org/files/ENCFF475VMR/@@download/ENCFF475VMR.bed.gz GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF818TCS bed narrowPeak peaks ENCSR130PDE ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NR4A1-human ENCAB728YTO DNA False 2016-09-01 ENCODE 1, 2 ENCFF276OII, ENCFF786GEU, ENCFF908PSF 7260754 ENCODE Processing Pipeline 78a49cabbf12a3cdecb106003614425f https://www.encodeproject.org/files/ENCFF818TCS/@@download/ENCFF818TCS.bed.gz GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF027OYY bigBed narrowPeak peaks ENCSR130PDE ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NR4A1-human ENCAB728YTO DNA False 2016-09-01 ENCODE 2 ENCFF299KOW 13220311 ENCODE Processing Pipeline 11bbffd7f0d36c160ef8c70662361ee8 https://www.encodeproject.org/files/ENCFF027OYY/@@download/ENCFF027OYY.bigBed GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF981NYL bigBed narrowPeak conservative idr thresholded peaks ENCSR130PDE ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NR4A1-human ENCAB728YTO DNA False 2016-09-01 ENCODE 1, 2 ENCFF783GDC 693845 ENCODE Processing Pipeline edfcedd4eb36aa10ca419b278196a011 https://www.encodeproject.org/files/ENCFF981NYL/@@download/ENCFF981NYL.bigBed GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF783GDC bed narrowPeak conservative idr thresholded peaks ENCSR130PDE ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NR4A1-human ENCAB728YTO DNA False 2016-09-01 ENCODE 1, 2 ENCFF299KOW, ENCFF419RSJ, ENCFF690WII, ENCFF818TCS 287867 ENCODE Processing Pipeline 04572d458b9c94a27d85d0324a0280b3 https://www.encodeproject.org/files/ENCFF783GDC/@@download/ENCFF783GDC.bed.gz GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF736RGU bigBed narrowPeak peaks ENCSR130PDE ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NR4A1-human ENCAB728YTO DNA False 2016-09-01 ENCODE 1 ENCFF690WII 13183053 ENCODE Processing Pipeline 32fac392a687813949eb735dbccc70d5 https://www.encodeproject.org/files/ENCFF736RGU/@@download/ENCFF736RGU.bigBed GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF330LTW bigBed narrowPeak peaks ENCSR130PDE ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NR4A1-human ENCAB728YTO DNA False 2016-09-01 ENCODE 1, 2 ENCFF818TCS 13089262 ENCODE Processing Pipeline 3020adb9bc72463402c761786947d681 https://www.encodeproject.org/files/ENCFF330LTW/@@download/ENCFF330LTW.bigBed GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF113ZXN bigBed narrowPeak optimal idr thresholded peaks ENCSR130PDE ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NR4A1-human ENCAB728YTO DNA False 2016-09-01 ENCODE 1, 2 ENCFF475VMR 889514 ENCODE Processing Pipeline 98ff198c00d88171c9939fd2268539a4 https://www.encodeproject.org/files/ENCFF113ZXN/@@download/ENCFF113ZXN.bigBed GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF000BZU bigBed broadPeak peaks ENCSR000ATX ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM1A-human ENCAB000AIH DNA see document see document False 2012-08-06 ENCODE 1 ENCFF001SZS 1365967 Bradley Bernstein, Broad c54ffebda101f6a5cb714d94cee11526 https://www.encodeproject.org/files/ENCFF000BZU/@@download/ENCFF000BZU.bigBed hg19 archived inconsistent platforms, low read depth, mild to moderate bottlenecking, low read length poor library complexity, insufficient read depth, severe bottlenecking ENCFF000BZV bigWig signal ENCSR000ATX ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM1A-human ENCAB000AIH DNA see document see document False 2012-08-06 ENCODE 1 ENCFF000BZW 254423829 Bradley Bernstein, Broad d5fbf87adf075c1c97d3194a80d464ac https://www.encodeproject.org/files/ENCFF000BZV/@@download/ENCFF000BZV.bigWig hg19 archived inconsistent platforms, low read depth, mild to moderate bottlenecking, low read length poor library complexity, insufficient read depth, severe bottlenecking ENCFF000BZW bam alignments ENCSR000ATX ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM1A-human ENCAB000AIH DNA see document see document False 2012-08-06 ENCODE 1 1 ENCFF000CAF 1222738634 Bradley Bernstein, Broad f3eb924aa96dfe5b1b38e16bcaf23a31 https://www.encodeproject.org/files/ENCFF000BZW/@@download/ENCFF000BZW.bam hg19 archived inconsistent platforms, low read depth, mild to moderate bottlenecking, low read length poor library complexity, insufficient read depth, severe bottlenecking ENCFF000CAF fastq reads ENCSR000ATX ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM1A-human ENCAB000AIH DNA see document see document False 2012-08-06 ENCODE 1 1 36 single-ended 1308254853 Bradley Bernstein, Broad b58326f803ea6fc38441a4a47f25de34 https://www.encodeproject.org/files/ENCFF000CAF/@@download/ENCFF000CAF.fastq.gz Illumina HiSeq 2000 /files/ENCFF000BWK/ released inconsistent platforms, low read depth, mild to moderate bottlenecking, low read length poor library complexity, insufficient read depth, severe bottlenecking ENCFF001SZS bed broadPeak peaks ENCSR000ATX ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM1A-human ENCAB000AIH DNA see document see document False 2012-08-06 ENCODE 1 ENCFF000BZW 717288 Bradley Bernstein, Broad 6d158e8a87912904f1803ba87fc4870e https://www.encodeproject.org/files/ENCFF001SZS/@@download/ENCFF001SZS.bed.gz hg19 archived inconsistent platforms, low read depth, mild to moderate bottlenecking, low read length poor library complexity, insufficient read depth, severe bottlenecking ENCFF084AGF fastq reads ENCSR000ATX ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM1A-human ENCAB000AIH DNA see document see document False 2012-08-06 ENCODE 3 2 36 single-ended 1561403035 Bradley Bernstein, Broad f4dc2c306788b85ab53a7fcc8512cd1b https://www.encodeproject.org/files/ENCFF084AGF/@@download/ENCFF084AGF.fastq.gz Illumina HiSeq 2000 /files/ENCFF000BWK/ released inconsistent platforms, low read depth, mild to moderate bottlenecking, low read length poor library complexity, insufficient read depth, severe bottlenecking ENCFF249VOJ fastq reads ENCSR000ATX ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM1A-human ENCAB000AIH DNA see document see document False 2012-08-06 ENCODE 2 1 36 single-ended 775997541 Bradley Bernstein, Broad 96ce54ba9a82034fe97eb026cf3787a5 https://www.encodeproject.org/files/ENCFF249VOJ/@@download/ENCFF249VOJ.fastq.gz Illumina HiSeq 2000 /files/ENCFF000BWK/ released inconsistent platforms, low read depth, mild to moderate bottlenecking, low read length poor library complexity, insufficient read depth, severe bottlenecking ENCFF519FAZ fastq reads ENCSR000ATX ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM1A-human ENCAB000AIH DNA see document see document False 2012-08-06 ENCODE 3 1 36 single-ended 1279276014 Bradley Bernstein, Broad 6bf04d724a5f442b882083f27b25f66c https://www.encodeproject.org/files/ENCFF519FAZ/@@download/ENCFF519FAZ.fastq.gz Illumina HiSeq 2000 /files/ENCFF000BWK/ released inconsistent platforms, low read depth, mild to moderate bottlenecking, low read length poor library complexity, insufficient read depth, severe bottlenecking ENCFF822GDN bam alignments ENCSR000ATX ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM1A-human ENCAB000AIH DNA see document see document False 2012-08-06 ENCODE 2 36 ENCFF249VOJ, ENCFF643CGH 281939439 ENCODE Processing Pipeline b35f28ade38fa4d5dfaad0e689071d3b https://www.encodeproject.org/files/ENCFF822GDN/@@download/ENCFF822GDN.bam GRCh38 released inconsistent platforms, low read depth, mild to moderate bottlenecking, low read length poor library complexity, insufficient read depth, severe bottlenecking ENCFF341CNR bam unfiltered alignments ENCSR000ATX ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM1A-human ENCAB000AIH DNA see document see document False 2012-08-06 ENCODE 2 36 ENCFF249VOJ, ENCFF643CGH 949982127 ENCODE Processing Pipeline fc5c4b94e70f610e4a4a4dd6c65cc224 https://www.encodeproject.org/files/ENCFF341CNR/@@download/ENCFF341CNR.bam GRCh38 released inconsistent platforms, low read depth, mild to moderate bottlenecking, low read length poor library complexity, insufficient read depth, severe bottlenecking ENCFF374IMB bam alignments ENCSR000ATX ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM1A-human ENCAB000AIH DNA see document see document False 2012-08-06 ENCODE 1 36 ENCFF000CAF, ENCFF643CGH 524963090 ENCODE Processing Pipeline 8f9215ffdf1933ec8c431ec6ba63b553 https://www.encodeproject.org/files/ENCFF374IMB/@@download/ENCFF374IMB.bam GRCh38 released inconsistent platforms, low read depth, mild to moderate bottlenecking, low read length poor library complexity, insufficient read depth, severe bottlenecking ENCFF221GGU bam unfiltered alignments ENCSR000ATX ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM1A-human ENCAB000AIH DNA see document see document False 2012-08-06 ENCODE 1 36 ENCFF000CAF, ENCFF643CGH 1579488577 ENCODE Processing Pipeline 229376cd615e71586c29b468f0eec31b https://www.encodeproject.org/files/ENCFF221GGU/@@download/ENCFF221GGU.bam GRCh38 released inconsistent platforms, low read depth, mild to moderate bottlenecking, low read length poor library complexity, insufficient read depth, severe bottlenecking ENCFF010NNN bam unfiltered alignments ENCSR000ATX ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM1A-human ENCAB000AIH DNA see document see document False 2012-08-06 ENCODE 3 36 ENCFF084AGF, ENCFF519FAZ, ENCFF643CGH 3554111422 ENCODE Processing Pipeline 6b47a78143db1ebb9bad884c587b33c5 https://www.encodeproject.org/files/ENCFF010NNN/@@download/ENCFF010NNN.bam GRCh38 released inconsistent platforms, low read depth, mild to moderate bottlenecking, low read length poor library complexity, insufficient read depth, severe bottlenecking ENCFF679IPF bam alignments ENCSR000ATX ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM1A-human ENCAB000AIH DNA see document see document False 2012-08-06 ENCODE 3 36 ENCFF084AGF, ENCFF519FAZ, ENCFF643CGH 2226250960 ENCODE Processing Pipeline bcc5af1b5d35c89bcfd9f5a513743342 https://www.encodeproject.org/files/ENCFF679IPF/@@download/ENCFF679IPF.bam GRCh38 released inconsistent platforms, low read depth, mild to moderate bottlenecking, low read length poor library complexity, insufficient read depth, severe bottlenecking ENCFF847SDX bam unfiltered alignments ENCSR000ATX ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM1A-human ENCAB000AIH DNA see document see document False 2012-08-06 ENCODE 2 36 ENCFF249VOJ, ENCFF807MUK 945174348 ENCODE Processing Pipeline 949185428e336163d5e8d853551dd7ae https://www.encodeproject.org/files/ENCFF847SDX/@@download/ENCFF847SDX.bam hg19 released inconsistent platforms, low read depth, mild to moderate bottlenecking, low read length poor library complexity, insufficient read depth, severe bottlenecking ENCFF481OAA bam alignments ENCSR000ATX ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM1A-human ENCAB000AIH DNA see document see document False 2012-08-06 ENCODE 2 36 ENCFF249VOJ, ENCFF807MUK 282171072 ENCODE Processing Pipeline b5c8c901377417e252c4fc5368278ea3 https://www.encodeproject.org/files/ENCFF481OAA/@@download/ENCFF481OAA.bam hg19 released inconsistent platforms, low read depth, mild to moderate bottlenecking, low read length poor library complexity, insufficient read depth, severe bottlenecking ENCFF071ZFS bam unfiltered alignments ENCSR000ATX ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM1A-human ENCAB000AIH DNA see document see document False 2012-08-06 ENCODE 1 36 ENCFF000CAF, ENCFF807MUK 1571942755 ENCODE Processing Pipeline 015e8b7aefda5e946b207d177b6a1164 https://www.encodeproject.org/files/ENCFF071ZFS/@@download/ENCFF071ZFS.bam hg19 released inconsistent platforms, low read depth, mild to moderate bottlenecking, low read length poor library complexity, insufficient read depth, severe bottlenecking ENCFF530OXD bam alignments ENCSR000ATX ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM1A-human ENCAB000AIH DNA see document see document False 2012-08-06 ENCODE 1 36 ENCFF000CAF, ENCFF807MUK 525353513 ENCODE Processing Pipeline ff1f14db45c02b3f3dfd595b68363ab9 https://www.encodeproject.org/files/ENCFF530OXD/@@download/ENCFF530OXD.bam hg19 released inconsistent platforms, low read depth, mild to moderate bottlenecking, low read length poor library complexity, insufficient read depth, severe bottlenecking ENCFF390MDL bam alignments ENCSR000ATX ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM1A-human ENCAB000AIH DNA see document see document False 2012-08-06 ENCODE 3 36 ENCFF084AGF, ENCFF519FAZ, ENCFF807MUK 2227156676 ENCODE Processing Pipeline b458fba968648a56e191ba7938851432 https://www.encodeproject.org/files/ENCFF390MDL/@@download/ENCFF390MDL.bam hg19 released inconsistent platforms, low read depth, mild to moderate bottlenecking, low read length poor library complexity, insufficient read depth, severe bottlenecking ENCFF879GGV bam unfiltered alignments ENCSR000ATX ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM1A-human ENCAB000AIH DNA see document see document False 2012-08-06 ENCODE 3 36 ENCFF084AGF, ENCFF519FAZ, ENCFF807MUK 3538193956 ENCODE Processing Pipeline 89e8ed81192f0183d89904560fdf0096 https://www.encodeproject.org/files/ENCFF879GGV/@@download/ENCFF879GGV.bam hg19 released inconsistent platforms, low read depth, mild to moderate bottlenecking, low read length poor library complexity, insufficient read depth, severe bottlenecking ENCFF308HCL fastq reads ENCSR220YXI ChIP-seq EFO:0002067 K562 cell line Homo sapiens PRPF4-human ENCAB624FBH DNA SDS formaldehyde False 2017-03-07 ENCODE 1 1 40 single-ended 2873030941 Xiang-Dong Fu, UCSD 0fa02e2b6fb5d111c15e164ee3c80beb https://www.encodeproject.org/files/ENCFF308HCL/@@download/ENCFF308HCL.fastq.gz Illumina HiSeq 2000 /files/ENCFF317LUD/ released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, insufficient read depth, severe bottlenecking ENCFF486FVK fastq reads ENCSR220YXI ChIP-seq EFO:0002067 K562 cell line Homo sapiens PRPF4-human ENCAB624FBH DNA SDS formaldehyde False 2017-03-07 ENCODE 2 1 40 single-ended 2611117964 Xiang-Dong Fu, UCSD c19c8e633ee18a4e8b6d4ec0be792076 https://www.encodeproject.org/files/ENCFF486FVK/@@download/ENCFF486FVK.fastq.gz Illumina HiSeq 2000 /files/ENCFF338QTL/ released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, insufficient read depth, severe bottlenecking ENCFF876REW bam unfiltered alignments ENCSR220YXI ChIP-seq EFO:0002067 K562 cell line Homo sapiens PRPF4-human ENCAB624FBH DNA SDS formaldehyde False 2017-03-07 ENCODE 2 40 ENCFF486FVK, ENCFF807MUK 2605835043 ENCODE Processing Pipeline 8a55a73aab69e93816c96291fc9b094a https://www.encodeproject.org/files/ENCFF876REW/@@download/ENCFF876REW.bam hg19 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, insufficient read depth, severe bottlenecking ENCFF367OYT bam alignments ENCSR220YXI ChIP-seq EFO:0002067 K562 cell line Homo sapiens PRPF4-human ENCAB624FBH DNA SDS formaldehyde False 2017-03-07 ENCODE 2 40 ENCFF486FVK, ENCFF643CGH 343335450 ENCODE Processing Pipeline a2be2c44cecae3d2a9ced2a43ad1f0fa https://www.encodeproject.org/files/ENCFF367OYT/@@download/ENCFF367OYT.bam GRCh38 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, insufficient read depth, severe bottlenecking ENCFF889DCH bam alignments ENCSR220YXI ChIP-seq EFO:0002067 K562 cell line Homo sapiens PRPF4-human ENCAB624FBH DNA SDS formaldehyde False 2017-03-07 ENCODE 2 40 ENCFF486FVK, ENCFF807MUK 343831882 ENCODE Processing Pipeline b6d3da168c56665ede06974a7f5fcfb5 https://www.encodeproject.org/files/ENCFF889DCH/@@download/ENCFF889DCH.bam hg19 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, insufficient read depth, severe bottlenecking ENCFF691CZV bam unfiltered alignments ENCSR220YXI ChIP-seq EFO:0002067 K562 cell line Homo sapiens PRPF4-human ENCAB624FBH DNA SDS formaldehyde False 2017-03-07 ENCODE 2 40 ENCFF486FVK, ENCFF643CGH 2622040315 ENCODE Processing Pipeline babbd87ec4a89e1600ab79199e40ed6b https://www.encodeproject.org/files/ENCFF691CZV/@@download/ENCFF691CZV.bam GRCh38 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, insufficient read depth, severe bottlenecking ENCFF596NRP bam unfiltered alignments ENCSR220YXI ChIP-seq EFO:0002067 K562 cell line Homo sapiens PRPF4-human ENCAB624FBH DNA SDS formaldehyde False 2017-03-07 ENCODE 1 40 ENCFF308HCL, ENCFF643CGH 2877405610 ENCODE Processing Pipeline d5f01d61754d60d3b9efe40bc3467fa3 https://www.encodeproject.org/files/ENCFF596NRP/@@download/ENCFF596NRP.bam GRCh38 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, insufficient read depth, severe bottlenecking ENCFF895DLK bam alignments ENCSR220YXI ChIP-seq EFO:0002067 K562 cell line Homo sapiens PRPF4-human ENCAB624FBH DNA SDS formaldehyde False 2017-03-07 ENCODE 1 40 ENCFF308HCL, ENCFF643CGH 389329678 ENCODE Processing Pipeline f1249ffc958cc5e290be8596331f4c85 https://www.encodeproject.org/files/ENCFF895DLK/@@download/ENCFF895DLK.bam GRCh38 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, insufficient read depth, severe bottlenecking ENCFF630RXB bam unfiltered alignments ENCSR220YXI ChIP-seq EFO:0002067 K562 cell line Homo sapiens PRPF4-human ENCAB624FBH DNA SDS formaldehyde False 2017-03-07 ENCODE 1 40 ENCFF308HCL, ENCFF807MUK 2858593031 ENCODE Processing Pipeline 242f2b1e8f4b0b803bc7c2b98ed582d2 https://www.encodeproject.org/files/ENCFF630RXB/@@download/ENCFF630RXB.bam hg19 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, insufficient read depth, severe bottlenecking ENCFF103MEZ bam alignments ENCSR220YXI ChIP-seq EFO:0002067 K562 cell line Homo sapiens PRPF4-human ENCAB624FBH DNA SDS formaldehyde False 2017-03-07 ENCODE 1 40 ENCFF308HCL, ENCFF807MUK 389864842 ENCODE Processing Pipeline fe5f0bfecd676a403f492db0ef9583ef https://www.encodeproject.org/files/ENCFF103MEZ/@@download/ENCFF103MEZ.bam hg19 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, insufficient read depth, severe bottlenecking ENCFF692UVD bed narrowPeak peaks ENCSR220YXI ChIP-seq EFO:0002067 K562 cell line Homo sapiens PRPF4-human ENCAB624FBH DNA SDS formaldehyde False 2017-03-07 ENCODE 2 ENCFF325CNX, ENCFF889DCH 5715951 ENCODE Processing Pipeline a0705a7ca020cfd57a0ac4792910889f https://www.encodeproject.org/files/ENCFF692UVD/@@download/ENCFF692UVD.bed.gz hg19 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, insufficient read depth, severe bottlenecking ENCFF830DKY bigBed narrowPeak peaks ENCSR220YXI ChIP-seq EFO:0002067 K562 cell line Homo sapiens PRPF4-human ENCAB624FBH DNA SDS formaldehyde False 2017-03-07 ENCODE 1, 2 ENCFF310EMX 13110722 ENCODE Processing Pipeline e0edd855b34ad67125e155a2cb2efa85 https://www.encodeproject.org/files/ENCFF830DKY/@@download/ENCFF830DKY.bigBed hg19 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, insufficient read depth, severe bottlenecking ENCFF966OSI bigWig signal p-value ENCSR220YXI ChIP-seq EFO:0002067 K562 cell line Homo sapiens PRPF4-human ENCAB624FBH DNA SDS formaldehyde False 2017-03-07 ENCODE 1 ENCFF103MEZ, ENCFF502LLI 567916033 ENCODE Processing Pipeline c4667253a86aa0a79b04676548ebb30c https://www.encodeproject.org/files/ENCFF966OSI/@@download/ENCFF966OSI.bigWig hg19 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, insufficient read depth, severe bottlenecking ENCFF058KNJ bigWig signal p-value ENCSR220YXI ChIP-seq EFO:0002067 K562 cell line Homo sapiens PRPF4-human ENCAB624FBH DNA SDS formaldehyde False 2017-03-07 ENCODE 1, 2 ENCFF103MEZ, ENCFF325CNX, ENCFF502LLI, ENCFF889DCH 884947156 ENCODE Processing Pipeline 4c7cc15a590e0cdb118b0ca0cb0dd8dc https://www.encodeproject.org/files/ENCFF058KNJ/@@download/ENCFF058KNJ.bigWig hg19 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, insufficient read depth, severe bottlenecking ENCFF035SWM bigWig fold change over control ENCSR220YXI ChIP-seq EFO:0002067 K562 cell line Homo sapiens PRPF4-human ENCAB624FBH DNA SDS formaldehyde False 2017-03-07 ENCODE 1 ENCFF103MEZ, ENCFF502LLI 319810814 ENCODE Processing Pipeline c2a944b6df5eef329c77d203846426ef https://www.encodeproject.org/files/ENCFF035SWM/@@download/ENCFF035SWM.bigWig hg19 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, insufficient read depth, severe bottlenecking ENCFF835LTJ bigWig signal p-value ENCSR220YXI ChIP-seq EFO:0002067 K562 cell line Homo sapiens PRPF4-human ENCAB624FBH DNA SDS formaldehyde False 2017-03-07 ENCODE 2 ENCFF325CNX, ENCFF889DCH 448973159 ENCODE Processing Pipeline 6c1408e83f12c22181cb81d334711588 https://www.encodeproject.org/files/ENCFF835LTJ/@@download/ENCFF835LTJ.bigWig hg19 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, insufficient read depth, severe bottlenecking ENCFF187QGT bigWig fold change over control ENCSR220YXI ChIP-seq EFO:0002067 K562 cell line Homo sapiens PRPF4-human ENCAB624FBH DNA SDS formaldehyde False 2017-03-07 ENCODE 2 ENCFF325CNX, ENCFF889DCH 299768360 ENCODE Processing Pipeline 06db67ab6259b6964e8ac1ef6968ca44 https://www.encodeproject.org/files/ENCFF187QGT/@@download/ENCFF187QGT.bigWig hg19 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, insufficient read depth, severe bottlenecking ENCFF894WLR bed narrowPeak peaks ENCSR220YXI ChIP-seq EFO:0002067 K562 cell line Homo sapiens PRPF4-human ENCAB624FBH DNA SDS formaldehyde False 2017-03-07 ENCODE 1 ENCFF103MEZ, ENCFF502LLI 5826405 ENCODE Processing Pipeline ff8b608eefb951b37466226b0b1091bd https://www.encodeproject.org/files/ENCFF894WLR/@@download/ENCFF894WLR.bed.gz hg19 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, insufficient read depth, severe bottlenecking ENCFF310EMX bed narrowPeak peaks ENCSR220YXI ChIP-seq EFO:0002067 K562 cell line Homo sapiens PRPF4-human ENCAB624FBH DNA SDS formaldehyde False 2017-03-07 ENCODE 1, 2 ENCFF103MEZ, ENCFF325CNX, ENCFF502LLI, ENCFF889DCH 7122157 ENCODE Processing Pipeline d4f5f5d1c4cf8cc5828d8a3357a35691 https://www.encodeproject.org/files/ENCFF310EMX/@@download/ENCFF310EMX.bed.gz hg19 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, insufficient read depth, severe bottlenecking ENCFF872PFO bigBed narrowPeak peaks ENCSR220YXI ChIP-seq EFO:0002067 K562 cell line Homo sapiens PRPF4-human ENCAB624FBH DNA SDS formaldehyde False 2017-03-07 ENCODE 1 ENCFF894WLR 13102577 ENCODE Processing Pipeline 7dee88718e2b3a3c3f0857d4fc80f6ad https://www.encodeproject.org/files/ENCFF872PFO/@@download/ENCFF872PFO.bigBed hg19 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, insufficient read depth, severe bottlenecking ENCFF959ALN bigBed narrowPeak peaks ENCSR220YXI ChIP-seq EFO:0002067 K562 cell line Homo sapiens PRPF4-human ENCAB624FBH DNA SDS formaldehyde False 2017-03-07 ENCODE 2 ENCFF692UVD 13015732 ENCODE Processing Pipeline dfa74c38634648111453d59115c9651f https://www.encodeproject.org/files/ENCFF959ALN/@@download/ENCFF959ALN.bigBed hg19 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, insufficient read depth, severe bottlenecking ENCFF785ACI bed narrowPeak optimal idr thresholded peaks ENCSR220YXI ChIP-seq EFO:0002067 K562 cell line Homo sapiens PRPF4-human ENCAB624FBH DNA SDS formaldehyde False 2017-03-07 ENCODE 1, 2 ENCFF001TDO, ENCFF310EMX, ENCFF692UVD, ENCFF894WLR 119841 ENCODE Processing Pipeline ad820677d3eca6a165b3fe883114c783 https://www.encodeproject.org/files/ENCFF785ACI/@@download/ENCFF785ACI.bed.gz hg19 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, insufficient read depth, severe bottlenecking ENCFF472ISV bigWig fold change over control ENCSR220YXI ChIP-seq EFO:0002067 K562 cell line Homo sapiens PRPF4-human ENCAB624FBH DNA SDS formaldehyde False 2017-03-07 ENCODE 1, 2 ENCFF103MEZ, ENCFF325CNX, ENCFF502LLI, ENCFF889DCH 675894834 ENCODE Processing Pipeline 7e6c1085cc983a3e5ba1a734c0a93340 https://www.encodeproject.org/files/ENCFF472ISV/@@download/ENCFF472ISV.bigWig hg19 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, insufficient read depth, severe bottlenecking ENCFF902BIO bigBed narrowPeak optimal idr thresholded peaks ENCSR220YXI ChIP-seq EFO:0002067 K562 cell line Homo sapiens PRPF4-human ENCAB624FBH DNA SDS formaldehyde False 2017-03-07 ENCODE 1, 2 ENCFF785ACI 309747 ENCODE Processing Pipeline ee1844e315410aadea249da5975baaca https://www.encodeproject.org/files/ENCFF902BIO/@@download/ENCFF902BIO.bigBed hg19 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, insufficient read depth, severe bottlenecking ENCFF684SIQ bigWig fold change over control ENCSR220YXI ChIP-seq EFO:0002067 K562 cell line Homo sapiens PRPF4-human ENCAB624FBH DNA SDS formaldehyde False 2017-03-07 ENCODE 1 ENCFF836GUS, ENCFF895DLK 320706863 ENCODE Processing Pipeline 891eac43f1952c93ddb7e2c6e282a76d https://www.encodeproject.org/files/ENCFF684SIQ/@@download/ENCFF684SIQ.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, insufficient read depth, severe bottlenecking ENCFF202AJJ bigBed narrowPeak optimal idr thresholded peaks ENCSR220YXI ChIP-seq EFO:0002067 K562 cell line Homo sapiens PRPF4-human ENCAB624FBH DNA SDS formaldehyde False 2017-03-07 ENCODE 1, 2 ENCFF417RQZ 318609 ENCODE Processing Pipeline e669a5ef8022db0f2e7b07400a7ebeaf https://www.encodeproject.org/files/ENCFF202AJJ/@@download/ENCFF202AJJ.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, insufficient read depth, severe bottlenecking ENCFF756RFF bigBed narrowPeak peaks ENCSR220YXI ChIP-seq EFO:0002067 K562 cell line Homo sapiens PRPF4-human ENCAB624FBH DNA SDS formaldehyde False 2017-03-07 ENCODE 2 ENCFF406DQD 13028561 ENCODE Processing Pipeline a738ccac7180a332d35260e69fdc9e1d https://www.encodeproject.org/files/ENCFF756RFF/@@download/ENCFF756RFF.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, insufficient read depth, severe bottlenecking ENCFF705IRU bigWig fold change over control ENCSR220YXI ChIP-seq EFO:0002067 K562 cell line Homo sapiens PRPF4-human ENCAB624FBH DNA SDS formaldehyde False 2017-03-07 ENCODE 1, 2 ENCFF345ODV, ENCFF367OYT, ENCFF836GUS, ENCFF895DLK 678058362 ENCODE Processing Pipeline 8a955d8b9e1596b00bb6e8876efcc977 https://www.encodeproject.org/files/ENCFF705IRU/@@download/ENCFF705IRU.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, insufficient read depth, severe bottlenecking ENCFF520LVQ bed narrowPeak peaks ENCSR220YXI ChIP-seq EFO:0002067 K562 cell line Homo sapiens PRPF4-human ENCAB624FBH DNA SDS formaldehyde False 2017-03-07 ENCODE 1 ENCFF836GUS, ENCFF895DLK 5693207 ENCODE Processing Pipeline 53608b8841d1ed2f0b04bd38491b88a1 https://www.encodeproject.org/files/ENCFF520LVQ/@@download/ENCFF520LVQ.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, insufficient read depth, severe bottlenecking ENCFF406DQD bed narrowPeak peaks ENCSR220YXI ChIP-seq EFO:0002067 K562 cell line Homo sapiens PRPF4-human ENCAB624FBH DNA SDS formaldehyde False 2017-03-07 ENCODE 2 ENCFF345ODV, ENCFF367OYT 5715249 ENCODE Processing Pipeline 6e837f49c821c5cfb45cf8e6e6192403 https://www.encodeproject.org/files/ENCFF406DQD/@@download/ENCFF406DQD.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, insufficient read depth, severe bottlenecking ENCFF648YCS bed narrowPeak conservative idr thresholded peaks ENCSR220YXI ChIP-seq EFO:0002067 K562 cell line Homo sapiens PRPF4-human ENCAB624FBH DNA SDS formaldehyde False 2017-03-07 ENCODE 1, 2 ENCFF406DQD, ENCFF419RSJ, ENCFF520LVQ, ENCFF817OVD 124115 ENCODE Processing Pipeline aa47afd5ccde8dc9dd799a5d2979c711 https://www.encodeproject.org/files/ENCFF648YCS/@@download/ENCFF648YCS.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, insufficient read depth, severe bottlenecking ENCFF591WWL bigWig signal p-value ENCSR220YXI ChIP-seq EFO:0002067 K562 cell line Homo sapiens PRPF4-human ENCAB624FBH DNA SDS formaldehyde False 2017-03-07 ENCODE 1 ENCFF836GUS, ENCFF895DLK 464512364 ENCODE Processing Pipeline dda47cef2e8a140b056a52ab156978a2 https://www.encodeproject.org/files/ENCFF591WWL/@@download/ENCFF591WWL.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, insufficient read depth, severe bottlenecking ENCFF699GMR bigWig signal p-value ENCSR220YXI ChIP-seq EFO:0002067 K562 cell line Homo sapiens PRPF4-human ENCAB624FBH DNA SDS formaldehyde False 2017-03-07 ENCODE 2 ENCFF345ODV, ENCFF367OYT 450171934 ENCODE Processing Pipeline 65b74abd6549ba34c3b2cbcc6d91dfb4 https://www.encodeproject.org/files/ENCFF699GMR/@@download/ENCFF699GMR.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, insufficient read depth, severe bottlenecking ENCFF313SOS bigWig signal p-value ENCSR220YXI ChIP-seq EFO:0002067 K562 cell line Homo sapiens PRPF4-human ENCAB624FBH DNA SDS formaldehyde False 2017-03-07 ENCODE 1, 2 ENCFF345ODV, ENCFF367OYT, ENCFF836GUS, ENCFF895DLK 875736267 ENCODE Processing Pipeline 007354a3c4d31738ef87ccb35671e91f https://www.encodeproject.org/files/ENCFF313SOS/@@download/ENCFF313SOS.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, insufficient read depth, severe bottlenecking ENCFF988DTQ bigWig fold change over control ENCSR220YXI ChIP-seq EFO:0002067 K562 cell line Homo sapiens PRPF4-human ENCAB624FBH DNA SDS formaldehyde False 2017-03-07 ENCODE 2 ENCFF345ODV, ENCFF367OYT 298799651 ENCODE Processing Pipeline 0b548cfc54051e1adb60a7b99c28fa40 https://www.encodeproject.org/files/ENCFF988DTQ/@@download/ENCFF988DTQ.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, insufficient read depth, severe bottlenecking ENCFF817OVD bed narrowPeak peaks ENCSR220YXI ChIP-seq EFO:0002067 K562 cell line Homo sapiens PRPF4-human ENCAB624FBH DNA SDS formaldehyde False 2017-03-07 ENCODE 1, 2 ENCFF345ODV, ENCFF367OYT, ENCFF836GUS, ENCFF895DLK 7118090 ENCODE Processing Pipeline 589824b589c74b441b636d444acb40f6 https://www.encodeproject.org/files/ENCFF817OVD/@@download/ENCFF817OVD.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, insufficient read depth, severe bottlenecking ENCFF194LUL bigBed narrowPeak peaks ENCSR220YXI ChIP-seq EFO:0002067 K562 cell line Homo sapiens PRPF4-human ENCAB624FBH DNA SDS formaldehyde False 2017-03-07 ENCODE 1 ENCFF520LVQ 13152120 ENCODE Processing Pipeline 132f98651fadf0c68930b2c631c50a89 https://www.encodeproject.org/files/ENCFF194LUL/@@download/ENCFF194LUL.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, insufficient read depth, severe bottlenecking ENCFF905KPT bigBed narrowPeak peaks ENCSR220YXI ChIP-seq EFO:0002067 K562 cell line Homo sapiens PRPF4-human ENCAB624FBH DNA SDS formaldehyde False 2017-03-07 ENCODE 1, 2 ENCFF817OVD 13140559 ENCODE Processing Pipeline a410a5628252fabc1024d0b58ae9f0d2 https://www.encodeproject.org/files/ENCFF905KPT/@@download/ENCFF905KPT.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, insufficient read depth, severe bottlenecking ENCFF619FVA bigBed narrowPeak conservative idr thresholded peaks ENCSR220YXI ChIP-seq EFO:0002067 K562 cell line Homo sapiens PRPF4-human ENCAB624FBH DNA SDS formaldehyde False 2017-03-07 ENCODE 1, 2 ENCFF648YCS 318241 ENCODE Processing Pipeline dcfffa9895783ad95931ea2813dbc3dc https://www.encodeproject.org/files/ENCFF619FVA/@@download/ENCFF619FVA.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, insufficient read depth, severe bottlenecking ENCFF417RQZ bed narrowPeak optimal idr thresholded peaks ENCSR220YXI ChIP-seq EFO:0002067 K562 cell line Homo sapiens PRPF4-human ENCAB624FBH DNA SDS formaldehyde False 2017-03-07 ENCODE 1, 2 ENCFF406DQD, ENCFF419RSJ, ENCFF520LVQ, ENCFF817OVD 124739 ENCODE Processing Pipeline f345e7332fcc3325d1877c89f65a3cfb https://www.encodeproject.org/files/ENCFF417RQZ/@@download/ENCFF417RQZ.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, insufficient read depth, severe bottlenecking ENCFF512WRL bam unfiltered alignments ENCSR845BCL ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF639-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 50 ENCFF751GLM, ENCFF801EQE, ENCFF807MUK 1130583126 ENCODE Processing Pipeline 810f212a6fc43925d4bb82eedf2be19b https://www.encodeproject.org/files/ENCFF512WRL/@@download/ENCFF512WRL.bam hg19 released missing genetic modification characterization, low read depth missing control alignments ENCFF079ING bam unfiltered alignments ENCSR845BCL ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF639-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 50 ENCFF157QEO, ENCFF201XOJ, ENCFF807MUK 1250218921 ENCODE Processing Pipeline 6d9c8a2a89f11761541a1d2c2ec3735a https://www.encodeproject.org/files/ENCFF079ING/@@download/ENCFF079ING.bam hg19 released missing genetic modification characterization, low read depth missing control alignments ENCFF751GLM fastq reads ENCSR845BCL ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF639-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 1 50 single-ended 479779508 Kevin White, UChicago 3d6387b73d110f1c3a8da91109fb962e SRA:SRR6214119 https://www.encodeproject.org/files/ENCFF751GLM/@@download/ENCFF751GLM.fastq.gz Illumina HiSeq 2500 /files/ENCFF184BAC/, /files/ENCFF387LKO/ released missing genetic modification characterization, low read depth missing control alignments ENCFF201XOJ fastq reads ENCSR845BCL ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF639-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 1 50 single-ended 460343489 Kevin White, UChicago 358def595a2952fcb09788c077532bf9 SRA:SRR6214121 https://www.encodeproject.org/files/ENCFF201XOJ/@@download/ENCFF201XOJ.fastq.gz Illumina HiSeq 2500 /files/ENCFF184BAC/, /files/ENCFF387LKO/ released missing genetic modification characterization, low read depth missing control alignments ENCFF801EQE fastq reads ENCSR845BCL ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF639-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 1 50 single-ended 568216535 Kevin White, UChicago 9d075b681035a9e7c6bd33473a8fa7a1 SRA:SRR6214120 https://www.encodeproject.org/files/ENCFF801EQE/@@download/ENCFF801EQE.fastq.gz Illumina HiSeq 2500 /files/ENCFF184BAC/, /files/ENCFF387LKO/ released missing genetic modification characterization, low read depth missing control alignments ENCFF157QEO fastq reads ENCSR845BCL ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF639-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 1 50 single-ended 743376194 Kevin White, UChicago 2a211682ceb8a82f9495377c5e1da5c5 SRA:SRR6214122 https://www.encodeproject.org/files/ENCFF157QEO/@@download/ENCFF157QEO.fastq.gz Illumina HiSeq 2500 /files/ENCFF184BAC/, /files/ENCFF387LKO/ released missing genetic modification characterization, low read depth missing control alignments ENCFF117CKT bam alignments ENCSR845BCL ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF639-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 50 ENCFF751GLM, ENCFF801EQE, ENCFF807MUK 866627645 ENCODE Processing Pipeline a553c521f6df6842113fdd94f9535795 https://www.encodeproject.org/files/ENCFF117CKT/@@download/ENCFF117CKT.bam hg19 released missing genetic modification characterization, low read depth missing control alignments ENCFF916QKW bam alignments ENCSR845BCL ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF639-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 50 ENCFF157QEO, ENCFF201XOJ, ENCFF807MUK 850188064 ENCODE Processing Pipeline dcdd793a9047dc70f124e185a5bceada https://www.encodeproject.org/files/ENCFF916QKW/@@download/ENCFF916QKW.bam hg19 released missing genetic modification characterization, low read depth missing control alignments ENCFF591TYU bigWig signal p-value ENCSR845BCL ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF639-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF117CKT, ENCFF574IJZ 522995881 ENCODE Processing Pipeline 99dbe5cfe14df08541f9118d7b3c79a5 https://www.encodeproject.org/files/ENCFF591TYU/@@download/ENCFF591TYU.bigWig hg19 released missing genetic modification characterization, low read depth missing control alignments ENCFF885CRC bigWig fold change over control ENCSR845BCL ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF639-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF117CKT, ENCFF574IJZ 490590959 ENCODE Processing Pipeline 09efb11da278026499015cd57ca5eeac https://www.encodeproject.org/files/ENCFF885CRC/@@download/ENCFF885CRC.bigWig hg19 released missing genetic modification characterization, low read depth missing control alignments ENCFF321QVJ bigWig signal p-value ENCSR845BCL ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF639-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF574IJZ, ENCFF916QKW 506560976 ENCODE Processing Pipeline ce95993ba4530e602df603e4de6cdbc3 https://www.encodeproject.org/files/ENCFF321QVJ/@@download/ENCFF321QVJ.bigWig hg19 released missing genetic modification characterization, low read depth missing control alignments ENCFF879KFV bigWig fold change over control ENCSR845BCL ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF639-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF574IJZ, ENCFF916QKW 471114668 ENCODE Processing Pipeline d6773154c2d991521219f08b0847fece https://www.encodeproject.org/files/ENCFF879KFV/@@download/ENCFF879KFV.bigWig hg19 released missing genetic modification characterization, low read depth missing control alignments ENCFF312PLO bigWig fold change over control ENCSR845BCL ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF639-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF117CKT, ENCFF574IJZ, ENCFF916QKW 737984779 ENCODE Processing Pipeline 9c4f59b82e1050fd45b9c6fa03dc3478 https://www.encodeproject.org/files/ENCFF312PLO/@@download/ENCFF312PLO.bigWig hg19 released missing genetic modification characterization, low read depth missing control alignments ENCFF117FVM bigWig signal p-value ENCSR845BCL ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF639-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF117CKT, ENCFF574IJZ, ENCFF916QKW 594836165 ENCODE Processing Pipeline 2dec60e28c9249aa4356175df0cff9bc https://www.encodeproject.org/files/ENCFF117FVM/@@download/ENCFF117FVM.bigWig hg19 released missing genetic modification characterization, low read depth missing control alignments ENCFF543QKR bed narrowPeak peaks ENCSR845BCL ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF639-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF117CKT, ENCFF574IJZ, ENCFF916QKW 7033796 ENCODE Processing Pipeline 99caf292082895bdef0a2b5f5c39929e https://www.encodeproject.org/files/ENCFF543QKR/@@download/ENCFF543QKR.bed.gz hg19 released missing genetic modification characterization, low read depth missing control alignments ENCFF816KBT bed narrowPeak peaks ENCSR845BCL ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF639-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF574IJZ, ENCFF916QKW 6588877 ENCODE Processing Pipeline 5abbf5c5eef77f27ff04b1ba5489df94 https://www.encodeproject.org/files/ENCFF816KBT/@@download/ENCFF816KBT.bed.gz hg19 released missing genetic modification characterization, low read depth missing control alignments ENCFF433SFB bed narrowPeak peaks ENCSR845BCL ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF639-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF117CKT, ENCFF574IJZ 6612953 ENCODE Processing Pipeline e560efe96923141e1f2da95dfb04ab90 https://www.encodeproject.org/files/ENCFF433SFB/@@download/ENCFF433SFB.bed.gz hg19 released missing genetic modification characterization, low read depth missing control alignments ENCFF803KYG bigBed narrowPeak peaks ENCSR845BCL ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF639-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF816KBT 12684832 ENCODE Processing Pipeline 0fc6e2d3af9be32d9b4fcf100e5948f6 https://www.encodeproject.org/files/ENCFF803KYG/@@download/ENCFF803KYG.bigBed hg19 released missing genetic modification characterization, low read depth missing control alignments ENCFF841JFB bigBed narrowPeak peaks ENCSR845BCL ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF639-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF433SFB 12801727 ENCODE Processing Pipeline 6ded3ab91e7022e0f7e2143d1ef6b1c8 https://www.encodeproject.org/files/ENCFF841JFB/@@download/ENCFF841JFB.bigBed hg19 released missing genetic modification characterization, low read depth missing control alignments ENCFF420IFP bigBed narrowPeak peaks ENCSR845BCL ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF639-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF543QKR 12691225 ENCODE Processing Pipeline 7d9da08d84203ebc99af3ecca1b2b8ee https://www.encodeproject.org/files/ENCFF420IFP/@@download/ENCFF420IFP.bigBed hg19 released missing genetic modification characterization, low read depth missing control alignments ENCFF678YUE bam unfiltered alignments ENCSR845BCL ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF639-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 50 ENCFF157QEO, ENCFF201XOJ, ENCFF643CGH 1253681323 ENCODE Processing Pipeline 0b6718f158237bcccafbe2a08e36c99d https://www.encodeproject.org/files/ENCFF678YUE/@@download/ENCFF678YUE.bam GRCh38 released missing genetic modification characterization, low read depth missing control alignments ENCFF960OSJ bam unfiltered alignments ENCSR845BCL ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF639-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 50 ENCFF643CGH, ENCFF751GLM, ENCFF801EQE 1134368728 ENCODE Processing Pipeline a9c6c3f49973b2cdb84f53e336b00577 https://www.encodeproject.org/files/ENCFF960OSJ/@@download/ENCFF960OSJ.bam GRCh38 released missing genetic modification characterization, low read depth missing control alignments ENCFF433SUG bam alignments ENCSR845BCL ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF639-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 50 ENCFF157QEO, ENCFF201XOJ, ENCFF643CGH 849591098 ENCODE Processing Pipeline b6308a65d39629b6d698e4d8b0cb8023 https://www.encodeproject.org/files/ENCFF433SUG/@@download/ENCFF433SUG.bam GRCh38 released missing genetic modification characterization, low read depth missing control alignments ENCFF461OAN bam alignments ENCSR845BCL ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF639-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 50 ENCFF643CGH, ENCFF751GLM, ENCFF801EQE 866050158 ENCODE Processing Pipeline ef8b3b8c670a0123d610e3d0482899fb https://www.encodeproject.org/files/ENCFF461OAN/@@download/ENCFF461OAN.bam GRCh38 released missing genetic modification characterization, low read depth missing control alignments ENCFF511QUG bigWig signal p-value ENCSR845BCL ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF639-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF461OAN 463510201 ENCODE Processing Pipeline c74708b9cdf5f931952c4b01ae7fce48 https://www.encodeproject.org/files/ENCFF511QUG/@@download/ENCFF511QUG.bigWig GRCh38 released missing genetic modification characterization, low read depth missing control alignments ENCFF600ZUS bigWig signal p-value ENCSR845BCL ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF639-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF433SUG, ENCFF461OAN 603876437 ENCODE Processing Pipeline bd7b7c7d8390df88051515b66d1de81e https://www.encodeproject.org/files/ENCFF600ZUS/@@download/ENCFF600ZUS.bigWig GRCh38 released missing genetic modification characterization, low read depth missing control alignments ENCFF279ZMK bigWig fold change over control ENCSR845BCL ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF639-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF461OAN 483029975 ENCODE Processing Pipeline ba08827886fca972117a49f76f516fe4 https://www.encodeproject.org/files/ENCFF279ZMK/@@download/ENCFF279ZMK.bigWig GRCh38 released missing genetic modification characterization, low read depth missing control alignments ENCFF913XNH bigWig fold change over control ENCSR845BCL ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF639-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF433SUG 479915505 ENCODE Processing Pipeline 842830d9a24c7d9a9525d4cf37aa142a https://www.encodeproject.org/files/ENCFF913XNH/@@download/ENCFF913XNH.bigWig GRCh38 released missing genetic modification characterization, low read depth missing control alignments ENCFF976NAQ bigWig signal p-value ENCSR845BCL ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF639-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF433SUG 559991152 ENCODE Processing Pipeline 015710e694e3c05b9a1f63e8dc61aaf3 https://www.encodeproject.org/files/ENCFF976NAQ/@@download/ENCFF976NAQ.bigWig GRCh38 released missing genetic modification characterization, low read depth missing control alignments ENCFF558HNI bigBed narrowPeak peaks ENCSR845BCL ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF639-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF987CKN 12795486 ENCODE Processing Pipeline e279047d73a1b4bf500f641751679a78 https://www.encodeproject.org/files/ENCFF558HNI/@@download/ENCFF558HNI.bigBed GRCh38 released missing genetic modification characterization, low read depth missing control alignments ENCFF826JXZ bigWig fold change over control ENCSR845BCL ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF639-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF433SUG, ENCFF461OAN 744021126 ENCODE Processing Pipeline 243d1a66ed7c80248e3780810d339798 https://www.encodeproject.org/files/ENCFF826JXZ/@@download/ENCFF826JXZ.bigWig GRCh38 released missing genetic modification characterization, low read depth missing control alignments ENCFF987CKN bed narrowPeak peaks ENCSR845BCL ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF639-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF461OAN 6449753 ENCODE Processing Pipeline 7cdc4cd2bdbdc12c8edf52ed0d865d4d https://www.encodeproject.org/files/ENCFF987CKN/@@download/ENCFF987CKN.bed.gz GRCh38 released missing genetic modification characterization, low read depth missing control alignments ENCFF624SBC bigBed narrowPeak peaks ENCSR845BCL ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF639-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF630YZV 12677948 ENCODE Processing Pipeline f31806c5b280cc520a20efaac755b53f https://www.encodeproject.org/files/ENCFF624SBC/@@download/ENCFF624SBC.bigBed GRCh38 released missing genetic modification characterization, low read depth missing control alignments ENCFF630YZV bed narrowPeak peaks ENCSR845BCL ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF639-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF433SUG 6430063 ENCODE Processing Pipeline 02466b5249a235587d20108f4cb90baf https://www.encodeproject.org/files/ENCFF630YZV/@@download/ENCFF630YZV.bed.gz GRCh38 released missing genetic modification characterization, low read depth missing control alignments ENCFF668REA bed narrowPeak peaks ENCSR845BCL ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF639-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF433SUG, ENCFF461OAN 6922323 ENCODE Processing Pipeline da87d4c92e2680035f2b40a7a5342b4c https://www.encodeproject.org/files/ENCFF668REA/@@download/ENCFF668REA.bed.gz GRCh38 released missing genetic modification characterization, low read depth missing control alignments ENCFF255NHB bigBed narrowPeak conservative idr thresholded peaks ENCSR845BCL ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF639-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF599CTG 1002421 ENCODE Processing Pipeline 537ecc6ba00cdf6b4038abd4f6c64b08 https://www.encodeproject.org/files/ENCFF255NHB/@@download/ENCFF255NHB.bigBed GRCh38 released missing genetic modification characterization, low read depth missing control alignments ENCFF690UTT bigBed narrowPeak peaks ENCSR845BCL ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF639-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF668REA 12697212 ENCODE Processing Pipeline de20bd4e5631423cc7e5b78d531dbbf5 https://www.encodeproject.org/files/ENCFF690UTT/@@download/ENCFF690UTT.bigBed GRCh38 released missing genetic modification characterization, low read depth missing control alignments ENCFF017JQJ bed narrowPeak optimal idr thresholded peaks ENCSR845BCL ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF639-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF419RSJ, ENCFF630YZV, ENCFF668REA, ENCFF987CKN 482944 ENCODE Processing Pipeline 339764e3ef4038fa00edf4831cfadacd https://www.encodeproject.org/files/ENCFF017JQJ/@@download/ENCFF017JQJ.bed.gz GRCh38 released missing genetic modification characterization, low read depth missing control alignments ENCFF599CTG bed narrowPeak conservative idr thresholded peaks ENCSR845BCL ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF639-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF419RSJ, ENCFF630YZV, ENCFF668REA, ENCFF987CKN 466743 ENCODE Processing Pipeline 47922ef1344467b10f3895574c190815 https://www.encodeproject.org/files/ENCFF599CTG/@@download/ENCFF599CTG.bed.gz GRCh38 released missing genetic modification characterization, low read depth missing control alignments ENCFF060CZD bigBed narrowPeak optimal idr thresholded peaks ENCSR845BCL ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF639-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF017JQJ 1025722 ENCODE Processing Pipeline b0cacb8a6536d032d58c53c7c62a47ae https://www.encodeproject.org/files/ENCFF060CZD/@@download/ENCFF060CZD.bigBed GRCh38 released missing genetic modification characterization, low read depth missing control alignments ENCFF875GNJ bigBed narrowPeak conservative idr thresholded peaks ENCSR845BCL ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF639-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF644EZR 734835 ENCODE Processing Pipeline 22da0993404051e8c7daa5436126499b https://www.encodeproject.org/files/ENCFF875GNJ/@@download/ENCFF875GNJ.bigBed hg19 released missing genetic modification characterization, low read depth missing control alignments ENCFF644EZR bed narrowPeak conservative idr thresholded peaks ENCSR845BCL ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF639-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF001TDO, ENCFF433SFB, ENCFF543QKR, ENCFF816KBT 401666 ENCODE Processing Pipeline 0cf0e7db73fecb4e539bd97225721dbc https://www.encodeproject.org/files/ENCFF644EZR/@@download/ENCFF644EZR.bed.gz hg19 released missing genetic modification characterization, low read depth missing control alignments ENCFF120WOF bed narrowPeak optimal idr thresholded peaks ENCSR845BCL ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF639-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF001TDO, ENCFF433SFB, ENCFF543QKR, ENCFF816KBT 407319 ENCODE Processing Pipeline ad9c782b246e9bfbb2a00cdbb89a7885 https://www.encodeproject.org/files/ENCFF120WOF/@@download/ENCFF120WOF.bed.gz hg19 released missing genetic modification characterization, low read depth missing control alignments ENCFF124KQG bigBed narrowPeak optimal idr thresholded peaks ENCSR845BCL ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF639-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF120WOF 742663 ENCODE Processing Pipeline 4a2a2e375d0c9d4e6d845622200e10e5 https://www.encodeproject.org/files/ENCFF124KQG/@@download/ENCFF124KQG.bigBed hg19 released missing genetic modification characterization, low read depth missing control alignments ENCFF879EHU bam unfiltered alignments ENCSR005NMT ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ID3-human ENCAB728YTO DNA False 2016-02-16 ENCODE 1 100 ENCFF542CMJ, ENCFF780YRV, ENCFF807MUK 7622843029 ENCODE Processing Pipeline 32d24a7bdcce147da0d860d4e13cd9bb https://www.encodeproject.org/files/ENCFF879EHU/@@download/ENCFF879EHU.bam hg19 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF150UXA bam unfiltered alignments ENCSR005NMT ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ID3-human ENCAB728YTO DNA False 2016-02-16 ENCODE 2 100 ENCFF548RTA, ENCFF807MUK, ENCFF916QKA 8527542380 ENCODE Processing Pipeline 7b16d74b1c27e8746934e5eb192057a3 https://www.encodeproject.org/files/ENCFF150UXA/@@download/ENCFF150UXA.bam hg19 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF548RTA fastq reads ENCSR005NMT ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ID3-human ENCAB728YTO DNA False 2016-02-16 ENCODE 2 1 100 paired-ended 1 ENCFF916QKA 4060677456 Michael Snyder, Stanford 596696f328e50409679b057b472646ec SRA:SRR5112401 https://www.encodeproject.org/files/ENCFF548RTA/@@download/ENCFF548RTA.fastq.gz Illumina HiSeq 2000 /files/ENCFF622ATI/ released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF916QKA fastq reads ENCSR005NMT ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ID3-human ENCAB728YTO DNA False 2016-02-16 ENCODE 2 1 100 paired-ended 2 ENCFF548RTA 4156359325 Michael Snyder, Stanford 4e74a50a66983ae9949874ad6a913373 SRA:SRR5112401 https://www.encodeproject.org/files/ENCFF916QKA/@@download/ENCFF916QKA.fastq.gz Illumina HiSeq 2000 /files/ENCFF114DVM/ released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF780YRV fastq reads ENCSR005NMT ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ID3-human ENCAB728YTO DNA False 2016-02-16 ENCODE 1 1 100 paired-ended 2 ENCFF542CMJ 3615147983 Michael Snyder, Stanford 9f55b79ba7f5d153c4293886a54431a9 SRA:SRR5112402 https://www.encodeproject.org/files/ENCFF780YRV/@@download/ENCFF780YRV.fastq.gz Illumina HiSeq 2000 /files/ENCFF114DVM/ released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF542CMJ fastq reads ENCSR005NMT ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ID3-human ENCAB728YTO DNA False 2016-02-16 ENCODE 1 1 100 paired-ended 1 ENCFF780YRV 3537758153 Michael Snyder, Stanford 7aa1cc7e50456a75267fa670c4174ac1 SRA:SRR5112402 https://www.encodeproject.org/files/ENCFF542CMJ/@@download/ENCFF542CMJ.fastq.gz Illumina HiSeq 2000 /files/ENCFF622ATI/ released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF891JES bam alignments ENCSR005NMT ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ID3-human ENCAB728YTO DNA False 2016-02-16 ENCODE 1 100 ENCFF542CMJ, ENCFF780YRV, ENCFF807MUK 5876528880 ENCODE Processing Pipeline 48bf8e074130680450cb3ec3d7aca02c https://www.encodeproject.org/files/ENCFF891JES/@@download/ENCFF891JES.bam hg19 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF614AZS bam alignments ENCSR005NMT ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ID3-human ENCAB728YTO DNA False 2016-02-16 ENCODE 2 100 ENCFF548RTA, ENCFF807MUK, ENCFF916QKA 5772332460 ENCODE Processing Pipeline d6d9ec4b67a0b22dc9bbd4395905b9d0 https://www.encodeproject.org/files/ENCFF614AZS/@@download/ENCFF614AZS.bam hg19 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF214XHJ bigWig signal p-value ENCSR005NMT ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ID3-human ENCAB728YTO DNA False 2016-02-16 ENCODE 1 ENCFF242FHJ, ENCFF891JES 1216516350 ENCODE Processing Pipeline aa1cdfa9ca474ab9b826d87481743eb1 https://www.encodeproject.org/files/ENCFF214XHJ/@@download/ENCFF214XHJ.bigWig hg19 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF800MTW bigWig fold change over control ENCSR005NMT ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ID3-human ENCAB728YTO DNA False 2016-02-16 ENCODE 2 ENCFF242FHJ, ENCFF614AZS 1235019444 ENCODE Processing Pipeline b2840678315565df783663c226f34c9e https://www.encodeproject.org/files/ENCFF800MTW/@@download/ENCFF800MTW.bigWig hg19 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF687HID bigWig fold change over control ENCSR005NMT ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ID3-human ENCAB728YTO DNA False 2016-02-16 ENCODE 1 ENCFF242FHJ, ENCFF891JES 1202962810 ENCODE Processing Pipeline d07d0a4405af1ebacbfe2c2b0bf57df1 https://www.encodeproject.org/files/ENCFF687HID/@@download/ENCFF687HID.bigWig hg19 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF767ZAZ bed narrowPeak peaks ENCSR005NMT ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ID3-human ENCAB728YTO DNA False 2016-02-16 ENCODE 1, 2 ENCFF242FHJ, ENCFF614AZS, ENCFF891JES 7294856 ENCODE Processing Pipeline edd8d0f8099063cffdbc8f55a48a1cd1 https://www.encodeproject.org/files/ENCFF767ZAZ/@@download/ENCFF767ZAZ.bed.gz hg19 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF219QWC bigWig signal p-value ENCSR005NMT ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ID3-human ENCAB728YTO DNA False 2016-02-16 ENCODE 1, 2 ENCFF242FHJ, ENCFF614AZS, ENCFF891JES 1226739831 ENCODE Processing Pipeline c49502ca87fa1146729c97fd627618d8 https://www.encodeproject.org/files/ENCFF219QWC/@@download/ENCFF219QWC.bigWig hg19 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF625YNL bigBed narrowPeak peaks ENCSR005NMT ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ID3-human ENCAB728YTO DNA False 2016-02-16 ENCODE 2 ENCFF244XAR 13055873 ENCODE Processing Pipeline 497da13c3d444996a48b1a3f2499eb3c https://www.encodeproject.org/files/ENCFF625YNL/@@download/ENCFF625YNL.bigBed hg19 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF185EMV bigWig signal p-value ENCSR005NMT ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ID3-human ENCAB728YTO DNA False 2016-02-16 ENCODE 2 ENCFF242FHJ, ENCFF614AZS 1243110900 ENCODE Processing Pipeline ed5efe3bd9b86f4e8aefe2983f4ea439 https://www.encodeproject.org/files/ENCFF185EMV/@@download/ENCFF185EMV.bigWig hg19 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF367HWH bigWig fold change over control ENCSR005NMT ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ID3-human ENCAB728YTO DNA False 2016-02-16 ENCODE 1, 2 ENCFF242FHJ, ENCFF614AZS, ENCFF891JES 1851883568 ENCODE Processing Pipeline 742e15fd80260f923d1f6b118bf4b5c4 https://www.encodeproject.org/files/ENCFF367HWH/@@download/ENCFF367HWH.bigWig hg19 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF464FVG bed narrowPeak peaks ENCSR005NMT ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ID3-human ENCAB728YTO DNA False 2016-02-16 ENCODE 1 ENCFF242FHJ, ENCFF891JES 7036651 ENCODE Processing Pipeline ccdcaf9293bb0c0d8e5b0cd30f95ece0 https://www.encodeproject.org/files/ENCFF464FVG/@@download/ENCFF464FVG.bed.gz hg19 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF244XAR bed narrowPeak peaks ENCSR005NMT ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ID3-human ENCAB728YTO DNA False 2016-02-16 ENCODE 2 ENCFF242FHJ, ENCFF614AZS 7030599 ENCODE Processing Pipeline 09abb517586ae010888de294cb016b61 https://www.encodeproject.org/files/ENCFF244XAR/@@download/ENCFF244XAR.bed.gz hg19 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF233ZCQ bigBed narrowPeak peaks ENCSR005NMT ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ID3-human ENCAB728YTO DNA False 2016-02-16 ENCODE 1 ENCFF464FVG 13053915 ENCODE Processing Pipeline e1f3ee4a91a9e1ab2728b7c9f2656ad5 https://www.encodeproject.org/files/ENCFF233ZCQ/@@download/ENCFF233ZCQ.bigBed hg19 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF327TEA bigBed narrowPeak peaks ENCSR005NMT ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ID3-human ENCAB728YTO DNA False 2016-02-16 ENCODE 1, 2 ENCFF767ZAZ 12960742 ENCODE Processing Pipeline abdb919c7a8ca9b5ab5a08588266f2f4 https://www.encodeproject.org/files/ENCFF327TEA/@@download/ENCFF327TEA.bigBed hg19 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF197AGW bam unfiltered alignments ENCSR005NMT ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ID3-human ENCAB728YTO DNA False 2016-02-16 ENCODE 1 100 ENCFF542CMJ, ENCFF643CGH, ENCFF780YRV 7632936125 ENCODE Processing Pipeline 06bbfe9c521c80576554b845bcc19a12 https://www.encodeproject.org/files/ENCFF197AGW/@@download/ENCFF197AGW.bam GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF695GTB bam alignments ENCSR005NMT ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ID3-human ENCAB728YTO DNA False 2016-02-16 ENCODE 1 100 ENCFF542CMJ, ENCFF643CGH, ENCFF780YRV 5878034614 ENCODE Processing Pipeline b919bdc5db834052e7a3f257e6b12779 https://www.encodeproject.org/files/ENCFF695GTB/@@download/ENCFF695GTB.bam GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF090EWM bam unfiltered alignments ENCSR005NMT ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ID3-human ENCAB728YTO DNA False 2016-02-16 ENCODE 2 100 ENCFF548RTA, ENCFF643CGH, ENCFF916QKA 8535368939 ENCODE Processing Pipeline ad7ef42dd381d3246283e28802e337f2 https://www.encodeproject.org/files/ENCFF090EWM/@@download/ENCFF090EWM.bam GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF115BME bam alignments ENCSR005NMT ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ID3-human ENCAB728YTO DNA False 2016-02-16 ENCODE 2 100 ENCFF548RTA, ENCFF643CGH, ENCFF916QKA 5773969876 ENCODE Processing Pipeline 6fbd876dab9614c9c58e309fe55ef2fa https://www.encodeproject.org/files/ENCFF115BME/@@download/ENCFF115BME.bam GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF962JHR bigWig signal p-value ENCSR005NMT ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ID3-human ENCAB728YTO DNA False 2016-02-16 ENCODE 1 ENCFF059OPC, ENCFF695GTB 1218353209 ENCODE Processing Pipeline 6a0443cf9b46d9d1966d1f63e3b83aca https://www.encodeproject.org/files/ENCFF962JHR/@@download/ENCFF962JHR.bigWig GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF181SRY bigWig signal p-value ENCSR005NMT ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ID3-human ENCAB728YTO DNA False 2016-02-16 ENCODE 2 ENCFF059OPC, ENCFF115BME 1249742201 ENCODE Processing Pipeline 54922bcd6dd05b8762487c688488a0b6 https://www.encodeproject.org/files/ENCFF181SRY/@@download/ENCFF181SRY.bigWig GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF711UGQ bigWig signal p-value ENCSR005NMT ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ID3-human ENCAB728YTO DNA False 2016-02-16 ENCODE 1, 2 ENCFF059OPC, ENCFF115BME, ENCFF695GTB 1218648107 ENCODE Processing Pipeline 87cfdaf849b90e8f5095c85e7eef1bee https://www.encodeproject.org/files/ENCFF711UGQ/@@download/ENCFF711UGQ.bigWig GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF689WAF bigWig fold change over control ENCSR005NMT ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ID3-human ENCAB728YTO DNA False 2016-02-16 ENCODE 1 ENCFF059OPC, ENCFF695GTB 1207458389 ENCODE Processing Pipeline 6134c2d6509a65973462ed679b39844e https://www.encodeproject.org/files/ENCFF689WAF/@@download/ENCFF689WAF.bigWig GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF606XIM bigWig fold change over control ENCSR005NMT ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ID3-human ENCAB728YTO DNA False 2016-02-16 ENCODE 2 ENCFF059OPC, ENCFF115BME 1238813360 ENCODE Processing Pipeline 433376b5d44604ce864600c466f4c676 https://www.encodeproject.org/files/ENCFF606XIM/@@download/ENCFF606XIM.bigWig GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF411ROG bigWig fold change over control ENCSR005NMT ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ID3-human ENCAB728YTO DNA False 2016-02-16 ENCODE 1, 2 ENCFF059OPC, ENCFF115BME, ENCFF695GTB 1843072173 ENCODE Processing Pipeline a5927080f6fc1435f664136e4ca773bf https://www.encodeproject.org/files/ENCFF411ROG/@@download/ENCFF411ROG.bigWig GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF363HUX bed narrowPeak peaks ENCSR005NMT ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ID3-human ENCAB728YTO DNA False 2016-02-16 ENCODE 1 ENCFF059OPC, ENCFF695GTB 6976623 ENCODE Processing Pipeline acae3c176f8c8063aab1f0537f0745ea https://www.encodeproject.org/files/ENCFF363HUX/@@download/ENCFF363HUX.bed.gz GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF380CHE bed narrowPeak peaks ENCSR005NMT ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ID3-human ENCAB728YTO DNA False 2016-02-16 ENCODE 2 ENCFF059OPC, ENCFF115BME 6962935 ENCODE Processing Pipeline c95ebc18ec087162c551bd016770f18a https://www.encodeproject.org/files/ENCFF380CHE/@@download/ENCFF380CHE.bed.gz GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF723UBG bed narrowPeak peaks ENCSR005NMT ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ID3-human ENCAB728YTO DNA False 2016-02-16 ENCODE 1, 2 ENCFF059OPC, ENCFF115BME, ENCFF695GTB 7298045 ENCODE Processing Pipeline cd88aa0117d4a602315369482a4a59c7 https://www.encodeproject.org/files/ENCFF723UBG/@@download/ENCFF723UBG.bed.gz GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF833ORC bigBed narrowPeak peaks ENCSR005NMT ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ID3-human ENCAB728YTO DNA False 2016-02-16 ENCODE 2 ENCFF380CHE 13079208 ENCODE Processing Pipeline 6b9f21b07c9738fa7d5a649b47920435 https://www.encodeproject.org/files/ENCFF833ORC/@@download/ENCFF833ORC.bigBed GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF580AVL bigBed narrowPeak peaks ENCSR005NMT ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ID3-human ENCAB728YTO DNA False 2016-02-16 ENCODE 1 ENCFF363HUX 13076079 ENCODE Processing Pipeline 8eb0647f813e27b2624e3de09dde1dd3 https://www.encodeproject.org/files/ENCFF580AVL/@@download/ENCFF580AVL.bigBed GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF195LJB bigBed narrowPeak peaks ENCSR005NMT ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ID3-human ENCAB728YTO DNA False 2016-02-16 ENCODE 1, 2 ENCFF723UBG 12989316 ENCODE Processing Pipeline f4d73a4653abd6a75d79a5caf2ebca26 https://www.encodeproject.org/files/ENCFF195LJB/@@download/ENCFF195LJB.bigBed GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF516VRH bigBed narrowPeak conservative idr thresholded peaks ENCSR005NMT ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ID3-human ENCAB728YTO DNA False 2016-02-16 ENCODE 1, 2 ENCFF815REG 822735 ENCODE Processing Pipeline 06182561462c954e87ea74e3e651e87e https://www.encodeproject.org/files/ENCFF516VRH/@@download/ENCFF516VRH.bigBed GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF815REG bed narrowPeak conservative idr thresholded peaks ENCSR005NMT ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ID3-human ENCAB728YTO DNA False 2016-02-16 ENCODE 1, 2 ENCFF363HUX, ENCFF380CHE, ENCFF419RSJ, ENCFF723UBG 359849 ENCODE Processing Pipeline 29a3e6d2b254185994479efa6057fd2b https://www.encodeproject.org/files/ENCFF815REG/@@download/ENCFF815REG.bed.gz GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF638WDU bed narrowPeak optimal idr thresholded peaks ENCSR005NMT ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ID3-human ENCAB728YTO DNA False 2016-02-16 ENCODE 1, 2 ENCFF363HUX, ENCFF380CHE, ENCFF419RSJ, ENCFF723UBG 452199 ENCODE Processing Pipeline f5df8fa0af9688603bfec4e9a641a7f9 https://www.encodeproject.org/files/ENCFF638WDU/@@download/ENCFF638WDU.bed.gz GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF468VTJ bigBed narrowPeak optimal idr thresholded peaks ENCSR005NMT ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ID3-human ENCAB728YTO DNA False 2016-02-16 ENCODE 1, 2 ENCFF638WDU 990892 ENCODE Processing Pipeline 224cf4925f010984c6189fae10972221 https://www.encodeproject.org/files/ENCFF468VTJ/@@download/ENCFF468VTJ.bigBed GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF747JCC bigBed narrowPeak conservative idr thresholded peaks ENCSR005NMT ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ID3-human ENCAB728YTO DNA False 2016-02-16 ENCODE 1, 2 ENCFF792DSI 595055 ENCODE Processing Pipeline feec15013d10815eeb436a8b5bc3d27e https://www.encodeproject.org/files/ENCFF747JCC/@@download/ENCFF747JCC.bigBed hg19 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF835YLR bed narrowPeak optimal idr thresholded peaks ENCSR005NMT ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ID3-human ENCAB728YTO DNA False 2016-02-16 ENCODE 1, 2 ENCFF001TDO, ENCFF244XAR, ENCFF464FVG, ENCFF767ZAZ 376136 ENCODE Processing Pipeline f318a5df6df3b0f5af86990b56d56fe1 https://www.encodeproject.org/files/ENCFF835YLR/@@download/ENCFF835YLR.bed.gz hg19 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF698DFW bigBed narrowPeak optimal idr thresholded peaks ENCSR005NMT ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ID3-human ENCAB728YTO DNA False 2016-02-16 ENCODE 1, 2 ENCFF835YLR 719765 ENCODE Processing Pipeline 984e5ff05db76d77b2d54dcf8c0835e9 https://www.encodeproject.org/files/ENCFF698DFW/@@download/ENCFF698DFW.bigBed hg19 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF792DSI bed narrowPeak conservative idr thresholded peaks ENCSR005NMT ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ID3-human ENCAB728YTO DNA False 2016-02-16 ENCODE 1, 2 ENCFF001TDO, ENCFF244XAR, ENCFF464FVG, ENCFF767ZAZ 290783 ENCODE Processing Pipeline a3e585939b9783d2498a5048909eb2b1 https://www.encodeproject.org/files/ENCFF792DSI/@@download/ENCFF792DSI.bed.gz hg19 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF724HOV fastq reads ENCSR177DNR ChIP-seq EFO:0002067 K562 cell line Homo sapiens FIP1L1-human ENCAB511DBP DNA SDS formaldehyde False 2018-01-16 ENCODE 2 1 40 single-ended 484477990 Xiang-Dong Fu, UCSD 64043d2b0fb7895db4917b8dbb06e9ce https://www.encodeproject.org/files/ENCFF724HOV/@@download/ENCFF724HOV.fastq.gz Illumina HiSeq 2000 /files/ENCFF744ZJK/ released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF428XVA fastq reads ENCSR177DNR ChIP-seq EFO:0002067 K562 cell line Homo sapiens FIP1L1-human ENCAB511DBP DNA SDS formaldehyde False 2018-01-16 ENCODE 1 1 40 single-ended 506607855 Xiang-Dong Fu, UCSD bef7bfb36761a2c4382451039a3dee47 https://www.encodeproject.org/files/ENCFF428XVA/@@download/ENCFF428XVA.fastq.gz Illumina HiSeq 2000 /files/ENCFF513NDA/ released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF380RZX bam unfiltered alignments ENCSR177DNR ChIP-seq EFO:0002067 K562 cell line Homo sapiens FIP1L1-human ENCAB511DBP DNA SDS formaldehyde False 2018-01-16 ENCODE 1 ENCFF428XVA, ENCFF643CGH 686536915 ENCODE Processing Pipeline 564c691116df996c81ccf5b645a6fb36 https://www.encodeproject.org/files/ENCFF380RZX/@@download/ENCFF380RZX.bam GRCh38 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF080PPI bam alignments ENCSR177DNR ChIP-seq EFO:0002067 K562 cell line Homo sapiens FIP1L1-human ENCAB511DBP DNA SDS formaldehyde False 2018-01-16 ENCODE 1 ENCFF428XVA, ENCFF643CGH 384469422 ENCODE Processing Pipeline 54a6271b5f9c8a7333440cdc9b4494fd https://www.encodeproject.org/files/ENCFF080PPI/@@download/ENCFF080PPI.bam GRCh38 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF531AUS fastq reads ENCSR177DNR ChIP-seq EFO:0002067 K562 cell line Homo sapiens FIP1L1-human ENCAB511DBP DNA SDS formaldehyde False 2018-01-16 ENCODE 2 1 40 single-ended 685624713 Xiang-Dong Fu, UCSD 63ad265623b8b7b54bb4760ea6896c73 https://www.encodeproject.org/files/ENCFF531AUS/@@download/ENCFF531AUS.fastq.gz Illumina HiSeq 2500 /files/ENCFF744ZJK/ released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF951VMN bam alignments ENCSR177DNR ChIP-seq EFO:0002067 K562 cell line Homo sapiens FIP1L1-human ENCAB511DBP DNA SDS formaldehyde False 2018-01-16 ENCODE 1 40 ENCFF428XVA, ENCFF807MUK 385052908 ENCODE Processing Pipeline 5d68646b50a9302069276a28d79fa994 https://www.encodeproject.org/files/ENCFF951VMN/@@download/ENCFF951VMN.bam hg19 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF512GCO bam unfiltered alignments ENCSR177DNR ChIP-seq EFO:0002067 K562 cell line Homo sapiens FIP1L1-human ENCAB511DBP DNA SDS formaldehyde False 2018-01-16 ENCODE 1 40 ENCFF428XVA, ENCFF807MUK 684287836 ENCODE Processing Pipeline f46d68313d08f6c62e5dc2de20e73a1d https://www.encodeproject.org/files/ENCFF512GCO/@@download/ENCFF512GCO.bam hg19 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF340TJZ bam unfiltered alignments ENCSR177DNR ChIP-seq EFO:0002067 K562 cell line Homo sapiens FIP1L1-human ENCAB511DBP DNA SDS formaldehyde False 2018-01-16 ENCODE 2 40 ENCFF531AUS, ENCFF643CGH, ENCFF724HOV 1142238687 ENCODE Processing Pipeline f3b421700e660c1aef7a9c94fa42b9c5 https://www.encodeproject.org/files/ENCFF340TJZ/@@download/ENCFF340TJZ.bam GRCh38 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF149TIO bam unfiltered alignments ENCSR177DNR ChIP-seq EFO:0002067 K562 cell line Homo sapiens FIP1L1-human ENCAB511DBP DNA SDS formaldehyde False 2018-01-16 ENCODE 2 40 ENCFF531AUS, ENCFF724HOV, ENCFF807MUK 1135614301 ENCODE Processing Pipeline dee0283ffdfa8612fecd0f0c6c272a6e https://www.encodeproject.org/files/ENCFF149TIO/@@download/ENCFF149TIO.bam hg19 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF300QTI bam alignments ENCSR177DNR ChIP-seq EFO:0002067 K562 cell line Homo sapiens FIP1L1-human ENCAB511DBP DNA SDS formaldehyde False 2018-01-16 ENCODE 2 40 ENCFF531AUS, ENCFF724HOV, ENCFF807MUK 461289338 ENCODE Processing Pipeline e91cb6cee1f946c93740d95c17468628 https://www.encodeproject.org/files/ENCFF300QTI/@@download/ENCFF300QTI.bam hg19 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF258VXR bam alignments ENCSR177DNR ChIP-seq EFO:0002067 K562 cell line Homo sapiens FIP1L1-human ENCAB511DBP DNA SDS formaldehyde False 2018-01-16 ENCODE 2 40 ENCFF531AUS, ENCFF643CGH, ENCFF724HOV 460737283 ENCODE Processing Pipeline 26160005a207b7dd118d3b538392d7df https://www.encodeproject.org/files/ENCFF258VXR/@@download/ENCFF258VXR.bam GRCh38 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF066UXJ bigWig signal p-value ENCSR177DNR ChIP-seq EFO:0002067 K562 cell line Homo sapiens FIP1L1-human ENCAB511DBP DNA SDS formaldehyde False 2018-01-16 ENCODE 1 ENCFF529GUX, ENCFF951VMN 521287749 ENCODE Processing Pipeline ef9991c1e5c738317912df70df31b457 https://www.encodeproject.org/files/ENCFF066UXJ/@@download/ENCFF066UXJ.bigWig hg19 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF663TOC bigWig fold change over control ENCSR177DNR ChIP-seq EFO:0002067 K562 cell line Homo sapiens FIP1L1-human ENCAB511DBP DNA SDS formaldehyde False 2018-01-16 ENCODE 1 ENCFF529GUX, ENCFF951VMN 328011442 ENCODE Processing Pipeline 462786f097169add4dcc8ad273d9020b https://www.encodeproject.org/files/ENCFF663TOC/@@download/ENCFF663TOC.bigWig hg19 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF444PRG bigWig signal p-value ENCSR177DNR ChIP-seq EFO:0002067 K562 cell line Homo sapiens FIP1L1-human ENCAB511DBP DNA SDS formaldehyde False 2018-01-16 ENCODE 1 ENCFF080PPI, ENCFF554LOM 478494377 ENCODE Processing Pipeline 41ea08e2711a0a97db1d8fa6fd4ec97e https://www.encodeproject.org/files/ENCFF444PRG/@@download/ENCFF444PRG.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF479RSN bigWig signal p-value ENCSR177DNR ChIP-seq EFO:0002067 K562 cell line Homo sapiens FIP1L1-human ENCAB511DBP DNA SDS formaldehyde False 2018-01-16 ENCODE 2 ENCFF300QTI, ENCFF457CIV 563671533 ENCODE Processing Pipeline fe31efdee532489595801c0e359c6c81 https://www.encodeproject.org/files/ENCFF479RSN/@@download/ENCFF479RSN.bigWig hg19 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF186XHH bigWig fold change over control ENCSR177DNR ChIP-seq EFO:0002067 K562 cell line Homo sapiens FIP1L1-human ENCAB511DBP DNA SDS formaldehyde False 2018-01-16 ENCODE 1 ENCFF080PPI, ENCFF554LOM 327508021 ENCODE Processing Pipeline 2f7fa78f15c4e8b3f80c69acbeec2aff https://www.encodeproject.org/files/ENCFF186XHH/@@download/ENCFF186XHH.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF358WGP bigWig signal p-value ENCSR177DNR ChIP-seq EFO:0002067 K562 cell line Homo sapiens FIP1L1-human ENCAB511DBP DNA SDS formaldehyde False 2018-01-16 ENCODE 1, 2 ENCFF080PPI, ENCFF258VXR, ENCFF554LOM, ENCFF926NUN 953970511 ENCODE Processing Pipeline 32c5662865ef3d1bfa9b5efcead019af https://www.encodeproject.org/files/ENCFF358WGP/@@download/ENCFF358WGP.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF377LTD bigWig fold change over control ENCSR177DNR ChIP-seq EFO:0002067 K562 cell line Homo sapiens FIP1L1-human ENCAB511DBP DNA SDS formaldehyde False 2018-01-16 ENCODE 1, 2 ENCFF300QTI, ENCFF457CIV, ENCFF529GUX, ENCFF951VMN 828198112 ENCODE Processing Pipeline ff6107fdb5e44d3ee305106ce3200f9d https://www.encodeproject.org/files/ENCFF377LTD/@@download/ENCFF377LTD.bigWig hg19 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF640GRS bigBed narrowPeak peaks ENCSR177DNR ChIP-seq EFO:0002067 K562 cell line Homo sapiens FIP1L1-human ENCAB511DBP DNA SDS formaldehyde False 2018-01-16 ENCODE 1, 2 ENCFF341OFU 13228308 ENCODE Processing Pipeline 43c82c87698ee2c8e06da4ed272f68cc https://www.encodeproject.org/files/ENCFF640GRS/@@download/ENCFF640GRS.bigBed hg19 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF449FJO bigWig signal p-value ENCSR177DNR ChIP-seq EFO:0002067 K562 cell line Homo sapiens FIP1L1-human ENCAB511DBP DNA SDS formaldehyde False 2018-01-16 ENCODE 2 ENCFF258VXR, ENCFF926NUN 529566781 ENCODE Processing Pipeline b8cdcbae87a41d70872f5df96d6cd966 https://www.encodeproject.org/files/ENCFF449FJO/@@download/ENCFF449FJO.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF341OFU bed narrowPeak peaks ENCSR177DNR ChIP-seq EFO:0002067 K562 cell line Homo sapiens FIP1L1-human ENCAB511DBP DNA SDS formaldehyde False 2018-01-16 ENCODE 1, 2 ENCFF300QTI, ENCFF457CIV, ENCFF529GUX, ENCFF951VMN 6788681 ENCODE Processing Pipeline b84cfe2d4b41b5192327001cb1baecf8 https://www.encodeproject.org/files/ENCFF341OFU/@@download/ENCFF341OFU.bed.gz hg19 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF175KKB bigBed narrowPeak peaks ENCSR177DNR ChIP-seq EFO:0002067 K562 cell line Homo sapiens FIP1L1-human ENCAB511DBP DNA SDS formaldehyde False 2018-01-16 ENCODE 1 ENCFF255AOS 13088563 ENCODE Processing Pipeline f56da44714f3908d2a8659f900811da1 https://www.encodeproject.org/files/ENCFF175KKB/@@download/ENCFF175KKB.bigBed hg19 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF108CPW bigBed narrowPeak optimal idr thresholded peaks ENCSR177DNR ChIP-seq EFO:0002067 K562 cell line Homo sapiens FIP1L1-human ENCAB511DBP DNA SDS formaldehyde False 2018-01-16 ENCODE 1, 2 ENCFF883WYX 407275 ENCODE Processing Pipeline 09910123004695d871e3165bcf6f9b54 https://www.encodeproject.org/files/ENCFF108CPW/@@download/ENCFF108CPW.bigBed hg19 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF461WCG bigWig signal p-value ENCSR177DNR ChIP-seq EFO:0002067 K562 cell line Homo sapiens FIP1L1-human ENCAB511DBP DNA SDS formaldehyde False 2018-01-16 ENCODE 1, 2 ENCFF300QTI, ENCFF457CIV, ENCFF529GUX, ENCFF951VMN 908262727 ENCODE Processing Pipeline 3c3597fdb86177c7979fc8e00115c4cf https://www.encodeproject.org/files/ENCFF461WCG/@@download/ENCFF461WCG.bigWig hg19 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF447CUF bigWig fold change over control ENCSR177DNR ChIP-seq EFO:0002067 K562 cell line Homo sapiens FIP1L1-human ENCAB511DBP DNA SDS formaldehyde False 2018-01-16 ENCODE 2 ENCFF258VXR, ENCFF926NUN 370703006 ENCODE Processing Pipeline 9c732414ae25b7dd6ca7f5428b72e0b7 https://www.encodeproject.org/files/ENCFF447CUF/@@download/ENCFF447CUF.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF255AOS bed narrowPeak peaks ENCSR177DNR ChIP-seq EFO:0002067 K562 cell line Homo sapiens FIP1L1-human ENCAB511DBP DNA SDS formaldehyde False 2018-01-16 ENCODE 1 ENCFF529GUX, ENCFF951VMN 5745510 ENCODE Processing Pipeline 5eefc812b28c3b59766e5f51524c526e https://www.encodeproject.org/files/ENCFF255AOS/@@download/ENCFF255AOS.bed.gz hg19 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF616OHG bigWig fold change over control ENCSR177DNR ChIP-seq EFO:0002067 K562 cell line Homo sapiens FIP1L1-human ENCAB511DBP DNA SDS formaldehyde False 2018-01-16 ENCODE 1, 2 ENCFF080PPI, ENCFF258VXR, ENCFF554LOM, ENCFF926NUN 827189968 ENCODE Processing Pipeline 75f66d976d31c601b69b57ff4473d194 https://www.encodeproject.org/files/ENCFF616OHG/@@download/ENCFF616OHG.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF019GXB bigWig fold change over control ENCSR177DNR ChIP-seq EFO:0002067 K562 cell line Homo sapiens FIP1L1-human ENCAB511DBP DNA SDS formaldehyde False 2018-01-16 ENCODE 2 ENCFF300QTI, ENCFF457CIV 373412390 ENCODE Processing Pipeline b25b4996859893a1953fd8da9a32276d https://www.encodeproject.org/files/ENCFF019GXB/@@download/ENCFF019GXB.bigWig hg19 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF272ULK bed narrowPeak peaks ENCSR177DNR ChIP-seq EFO:0002067 K562 cell line Homo sapiens FIP1L1-human ENCAB511DBP DNA SDS formaldehyde False 2018-01-16 ENCODE 2 ENCFF300QTI, ENCFF457CIV 5730572 ENCODE Processing Pipeline 6ed5a6aad90593c15534d55f3255d91a https://www.encodeproject.org/files/ENCFF272ULK/@@download/ENCFF272ULK.bed.gz hg19 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF715VWF bigBed narrowPeak peaks ENCSR177DNR ChIP-seq EFO:0002067 K562 cell line Homo sapiens FIP1L1-human ENCAB511DBP DNA SDS formaldehyde False 2018-01-16 ENCODE 2 ENCFF272ULK 13229882 ENCODE Processing Pipeline ff1c6c6cf16046f62c5b78c1e00fc02c https://www.encodeproject.org/files/ENCFF715VWF/@@download/ENCFF715VWF.bigBed hg19 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF362ZTW bed narrowPeak conservative idr thresholded peaks ENCSR177DNR ChIP-seq EFO:0002067 K562 cell line Homo sapiens FIP1L1-human ENCAB511DBP DNA SDS formaldehyde False 2018-01-16 ENCODE 1, 2 ENCFF001TDO, ENCFF255AOS, ENCFF272ULK, ENCFF341OFU 162103 ENCODE Processing Pipeline 1a50e5972b86befb646a5fc2b567f457 https://www.encodeproject.org/files/ENCFF362ZTW/@@download/ENCFF362ZTW.bed.gz hg19 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF201OXE bigBed narrowPeak conservative idr thresholded peaks ENCSR177DNR ChIP-seq EFO:0002067 K562 cell line Homo sapiens FIP1L1-human ENCAB511DBP DNA SDS formaldehyde False 2018-01-16 ENCODE 1, 2 ENCFF362ZTW 374715 ENCODE Processing Pipeline a6f74466033aa1046caa0320340dfb78 https://www.encodeproject.org/files/ENCFF201OXE/@@download/ENCFF201OXE.bigBed hg19 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF883WYX bed narrowPeak optimal idr thresholded peaks ENCSR177DNR ChIP-seq EFO:0002067 K562 cell line Homo sapiens FIP1L1-human ENCAB511DBP DNA SDS formaldehyde False 2018-01-16 ENCODE 1, 2 ENCFF001TDO, ENCFF255AOS, ENCFF272ULK, ENCFF341OFU 183001 ENCODE Processing Pipeline eb13fa4a3357a71054dc9cd775fd98d3 https://www.encodeproject.org/files/ENCFF883WYX/@@download/ENCFF883WYX.bed.gz hg19 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF354QUL bed narrowPeak peaks ENCSR177DNR ChIP-seq EFO:0002067 K562 cell line Homo sapiens FIP1L1-human ENCAB511DBP DNA SDS formaldehyde False 2018-01-16 ENCODE 1 ENCFF080PPI, ENCFF554LOM 5620857 ENCODE Processing Pipeline a511c0135ccad5e7cdd0189c2a406aa7 https://www.encodeproject.org/files/ENCFF354QUL/@@download/ENCFF354QUL.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF609SGB bigBed narrowPeak peaks ENCSR177DNR ChIP-seq EFO:0002067 K562 cell line Homo sapiens FIP1L1-human ENCAB511DBP DNA SDS formaldehyde False 2018-01-16 ENCODE 2 ENCFF339HLR 13254333 ENCODE Processing Pipeline 69ddaee56a086c7b5d55d1045859878b https://www.encodeproject.org/files/ENCFF609SGB/@@download/ENCFF609SGB.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF478JBB bigBed narrowPeak conservative idr thresholded peaks ENCSR177DNR ChIP-seq EFO:0002067 K562 cell line Homo sapiens FIP1L1-human ENCAB511DBP DNA SDS formaldehyde False 2018-01-16 ENCODE 1, 2 ENCFF020OCJ 376323 ENCODE Processing Pipeline 43037c48aa08fe35c308faf8bbcdef59 https://www.encodeproject.org/files/ENCFF478JBB/@@download/ENCFF478JBB.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF506LKI bigBed narrowPeak peaks ENCSR177DNR ChIP-seq EFO:0002067 K562 cell line Homo sapiens FIP1L1-human ENCAB511DBP DNA SDS formaldehyde False 2018-01-16 ENCODE 1, 2 ENCFF800KZC 13267320 ENCODE Processing Pipeline bd6e48c79d24549b76e7e44fe7cfcea4 https://www.encodeproject.org/files/ENCFF506LKI/@@download/ENCFF506LKI.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF339HLR bed narrowPeak peaks ENCSR177DNR ChIP-seq EFO:0002067 K562 cell line Homo sapiens FIP1L1-human ENCAB511DBP DNA SDS formaldehyde False 2018-01-16 ENCODE 2 ENCFF258VXR, ENCFF926NUN 5618932 ENCODE Processing Pipeline 931a4bc3bd3ac4ebce1e0c02a666dfa4 https://www.encodeproject.org/files/ENCFF339HLR/@@download/ENCFF339HLR.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF020OCJ bed narrowPeak conservative idr thresholded peaks ENCSR177DNR ChIP-seq EFO:0002067 K562 cell line Homo sapiens FIP1L1-human ENCAB511DBP DNA SDS formaldehyde False 2018-01-16 ENCODE 1, 2 ENCFF339HLR, ENCFF354QUL, ENCFF419RSJ, ENCFF800KZC 161800 ENCODE Processing Pipeline a6f3bbaeb71070604438368e7a58b4ad https://www.encodeproject.org/files/ENCFF020OCJ/@@download/ENCFF020OCJ.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF084DTV bed narrowPeak optimal idr thresholded peaks ENCSR177DNR ChIP-seq EFO:0002067 K562 cell line Homo sapiens FIP1L1-human ENCAB511DBP DNA SDS formaldehyde False 2018-01-16 ENCODE 1, 2 ENCFF339HLR, ENCFF354QUL, ENCFF419RSJ, ENCFF800KZC 177627 ENCODE Processing Pipeline 855a976a31e1f8e958fffe778e5b8a62 https://www.encodeproject.org/files/ENCFF084DTV/@@download/ENCFF084DTV.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF002WKI bigBed narrowPeak optimal idr thresholded peaks ENCSR177DNR ChIP-seq EFO:0002067 K562 cell line Homo sapiens FIP1L1-human ENCAB511DBP DNA SDS formaldehyde False 2018-01-16 ENCODE 1, 2 ENCFF084DTV 401578 ENCODE Processing Pipeline 6bf038b588cec36d0726f53ce3ad0fc5 https://www.encodeproject.org/files/ENCFF002WKI/@@download/ENCFF002WKI.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF800KZC bed narrowPeak peaks ENCSR177DNR ChIP-seq EFO:0002067 K562 cell line Homo sapiens FIP1L1-human ENCAB511DBP DNA SDS formaldehyde False 2018-01-16 ENCODE 1, 2 ENCFF080PPI, ENCFF258VXR, ENCFF554LOM, ENCFF926NUN 6748215 ENCODE Processing Pipeline 4facb7a3b2dcfca297e12ab6b8ad2572 https://www.encodeproject.org/files/ENCFF800KZC/@@download/ENCFF800KZC.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF587CDK bigBed narrowPeak peaks ENCSR177DNR ChIP-seq EFO:0002067 K562 cell line Homo sapiens FIP1L1-human ENCAB511DBP DNA SDS formaldehyde False 2018-01-16 ENCODE 1 ENCFF354QUL 13094938 ENCODE Processing Pipeline 930ecfa50f352cad568e3df488fd097d https://www.encodeproject.org/files/ENCFF587CDK/@@download/ENCFF587CDK.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF382JTY bam unfiltered alignments ENCSR167JBG ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-DIDO1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 2 100 ENCFF597HDK, ENCFF807MUK, ENCFF992IHE 4201507330 ENCODE Processing Pipeline 58f06261a4c0d230605021983072fdaf https://www.encodeproject.org/files/ENCFF382JTY/@@download/ENCFF382JTY.bam hg19 released missing genetic modification characterization, low read depth ENCFF615ORE bam unfiltered alignments ENCSR167JBG ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-DIDO1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1 100 ENCFF382BWE, ENCFF807MUK, ENCFF943GMA 4127127266 ENCODE Processing Pipeline 7a82ffe7bace844edf2139f56ee783c3 https://www.encodeproject.org/files/ENCFF615ORE/@@download/ENCFF615ORE.bam hg19 released missing genetic modification characterization, low read depth ENCFF992IHE fastq reads ENCSR167JBG ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-DIDO1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 2 1 100 paired-ended 2 ENCFF597HDK 1902156161 Michael Snyder, Stanford 0b42faf2d2a2481f49be5579244589ee SRA:SRR5111196 https://www.encodeproject.org/files/ENCFF992IHE/@@download/ENCFF992IHE.fastq.gz Illumina HiSeq 2000 /files/ENCFF729LDU/ released missing genetic modification characterization, low read depth ENCFF597HDK fastq reads ENCSR167JBG ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-DIDO1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 2 1 100 paired-ended 1 ENCFF992IHE 1789316868 Michael Snyder, Stanford 0699a8e2a8e27d6fa9e99ec220a3ec0f SRA:SRR5111196 https://www.encodeproject.org/files/ENCFF597HDK/@@download/ENCFF597HDK.fastq.gz Illumina HiSeq 2000 /files/ENCFF795ITH/ released missing genetic modification characterization, low read depth ENCFF943GMA fastq reads ENCSR167JBG ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-DIDO1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1 1 100 paired-ended 2 ENCFF382BWE 1904449063 Michael Snyder, Stanford 6700b16e4a42ac7d76f0af239c295f85 SRA:SRR5111197 https://www.encodeproject.org/files/ENCFF943GMA/@@download/ENCFF943GMA.fastq.gz Illumina HiSeq 2000 /files/ENCFF729LDU/ released missing genetic modification characterization, low read depth ENCFF382BWE fastq reads ENCSR167JBG ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-DIDO1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1 1 100 paired-ended 1 ENCFF943GMA 1823939470 Michael Snyder, Stanford 776ee9bbb56b9691a1da96547e724391 SRA:SRR5111197 https://www.encodeproject.org/files/ENCFF382BWE/@@download/ENCFF382BWE.fastq.gz Illumina HiSeq 2000 /files/ENCFF795ITH/ released missing genetic modification characterization, low read depth ENCFF013WTE bam alignments ENCSR167JBG ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-DIDO1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 2 100 ENCFF597HDK, ENCFF807MUK, ENCFF992IHE 2969152143 ENCODE Processing Pipeline ae8ad145aaa8f163c24d56c510e30ef8 https://www.encodeproject.org/files/ENCFF013WTE/@@download/ENCFF013WTE.bam hg19 released missing genetic modification characterization, low read depth ENCFF845UEU bam alignments ENCSR167JBG ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-DIDO1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1 100 ENCFF382BWE, ENCFF807MUK, ENCFF943GMA 3334855232 ENCODE Processing Pipeline 79c762b616784416edae1094518e8a50 https://www.encodeproject.org/files/ENCFF845UEU/@@download/ENCFF845UEU.bam hg19 released missing genetic modification characterization, low read depth ENCFF895TBN bigWig signal p-value ENCSR167JBG ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-DIDO1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1 ENCFF496ANK, ENCFF845UEU 900031073 ENCODE Processing Pipeline 67a144fdd5f44039c0fe24ea7d316484 https://www.encodeproject.org/files/ENCFF895TBN/@@download/ENCFF895TBN.bigWig hg19 released missing genetic modification characterization, low read depth ENCFF334LQA bigWig signal p-value ENCSR167JBG ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-DIDO1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 2 ENCFF013WTE, ENCFF496ANK 875646095 ENCODE Processing Pipeline 7ccbf4cd478fe6d45eeac4770cf8d7bd https://www.encodeproject.org/files/ENCFF334LQA/@@download/ENCFF334LQA.bigWig hg19 released missing genetic modification characterization, low read depth ENCFF013ENY bigWig signal p-value ENCSR167JBG ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-DIDO1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF013WTE, ENCFF496ANK, ENCFF845UEU 1168039850 ENCODE Processing Pipeline 47656ffab12bbfcba7dfd26bb5aa2648 https://www.encodeproject.org/files/ENCFF013ENY/@@download/ENCFF013ENY.bigWig hg19 released missing genetic modification characterization, low read depth ENCFF842TXD bigWig fold change over control ENCSR167JBG ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-DIDO1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1 ENCFF496ANK, ENCFF845UEU 880592797 ENCODE Processing Pipeline d2f8e99b93914d69a3fe761d2b4a6db7 https://www.encodeproject.org/files/ENCFF842TXD/@@download/ENCFF842TXD.bigWig hg19 released missing genetic modification characterization, low read depth ENCFF812XFL bigWig fold change over control ENCSR167JBG ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-DIDO1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 2 ENCFF013WTE, ENCFF496ANK 803573096 ENCODE Processing Pipeline 6dec8e0df6859f321ae263be7a2ae23b https://www.encodeproject.org/files/ENCFF812XFL/@@download/ENCFF812XFL.bigWig hg19 released missing genetic modification characterization, low read depth ENCFF780XYT bigWig fold change over control ENCSR167JBG ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-DIDO1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF013WTE, ENCFF496ANK, ENCFF845UEU 1280071467 ENCODE Processing Pipeline af5f67cf3c8e082bc2cddf314058f8c9 https://www.encodeproject.org/files/ENCFF780XYT/@@download/ENCFF780XYT.bigWig hg19 released missing genetic modification characterization, low read depth ENCFF377KNC bed narrowPeak peaks ENCSR167JBG ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-DIDO1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1 ENCFF496ANK, ENCFF845UEU 6391584 ENCODE Processing Pipeline 8c8e547d257945af136b6f2be70dec7e https://www.encodeproject.org/files/ENCFF377KNC/@@download/ENCFF377KNC.bed.gz hg19 released missing genetic modification characterization, low read depth ENCFF307MIA bed narrowPeak peaks ENCSR167JBG ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-DIDO1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 2 ENCFF013WTE, ENCFF496ANK 6173968 ENCODE Processing Pipeline 15113e25626fbfbdb4bc89e7b87c6637 https://www.encodeproject.org/files/ENCFF307MIA/@@download/ENCFF307MIA.bed.gz hg19 released missing genetic modification characterization, low read depth ENCFF335CLS bigBed narrowPeak peaks ENCSR167JBG ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-DIDO1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF816UNQ 13129994 ENCODE Processing Pipeline 79329b7e7579c64c265f43115020b1e0 https://www.encodeproject.org/files/ENCFF335CLS/@@download/ENCFF335CLS.bigBed hg19 released missing genetic modification characterization, low read depth ENCFF816UNQ bed narrowPeak peaks ENCSR167JBG ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-DIDO1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF013WTE, ENCFF496ANK, ENCFF845UEU 7019159 ENCODE Processing Pipeline 882189324763d320649004f168a954b8 https://www.encodeproject.org/files/ENCFF816UNQ/@@download/ENCFF816UNQ.bed.gz hg19 released missing genetic modification characterization, low read depth ENCFF467RPG bigBed narrowPeak peaks ENCSR167JBG ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-DIDO1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1 ENCFF377KNC 13328931 ENCODE Processing Pipeline f7bd9e066d79f337a36620652014c711 https://www.encodeproject.org/files/ENCFF467RPG/@@download/ENCFF467RPG.bigBed hg19 released missing genetic modification characterization, low read depth ENCFF882ZBR bigBed narrowPeak peaks ENCSR167JBG ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-DIDO1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 2 ENCFF307MIA 13308239 ENCODE Processing Pipeline c28f537d537265a6ebe3cb4b11a005c4 https://www.encodeproject.org/files/ENCFF882ZBR/@@download/ENCFF882ZBR.bigBed hg19 released missing genetic modification characterization, low read depth ENCFF518PFA bam unfiltered alignments ENCSR167JBG ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-DIDO1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1 100 ENCFF382BWE, ENCFF643CGH, ENCFF943GMA 4133114544 ENCODE Processing Pipeline b4397f334b9ff81b2e8cf24cc2d1b2ef https://www.encodeproject.org/files/ENCFF518PFA/@@download/ENCFF518PFA.bam GRCh38 released missing genetic modification characterization, low read depth ENCFF937GJL bam unfiltered alignments ENCSR167JBG ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-DIDO1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 2 100 ENCFF597HDK, ENCFF643CGH, ENCFF992IHE 4210133988 ENCODE Processing Pipeline 9fb7c0535fa9640adcf018c7b67da088 https://www.encodeproject.org/files/ENCFF937GJL/@@download/ENCFF937GJL.bam GRCh38 released missing genetic modification characterization, low read depth ENCFF384DMV bam alignments ENCSR167JBG ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-DIDO1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 2 100 ENCFF597HDK, ENCFF643CGH, ENCFF992IHE 2971337301 ENCODE Processing Pipeline f0ef5a211065d1aaab028502ce72c1c0 https://www.encodeproject.org/files/ENCFF384DMV/@@download/ENCFF384DMV.bam GRCh38 released missing genetic modification characterization, low read depth ENCFF730MAX bam alignments ENCSR167JBG ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-DIDO1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1 100 ENCFF382BWE, ENCFF643CGH, ENCFF943GMA 3336769898 ENCODE Processing Pipeline 200da345b440cd9911130b525aa562e1 https://www.encodeproject.org/files/ENCFF730MAX/@@download/ENCFF730MAX.bam GRCh38 released missing genetic modification characterization, low read depth ENCFF862QEE bigWig signal p-value ENCSR167JBG ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-DIDO1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1 ENCFF647OZY, ENCFF730MAX 781610022 ENCODE Processing Pipeline 3cfb6e88288a1e1095b333569240bca3 https://www.encodeproject.org/files/ENCFF862QEE/@@download/ENCFF862QEE.bigWig GRCh38 released missing genetic modification characterization, low read depth ENCFF684BTP bigWig signal p-value ENCSR167JBG ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-DIDO1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 2 ENCFF384DMV, ENCFF647OZY 909180625 ENCODE Processing Pipeline e105991d6c46cb47c8fe13edc4312ec4 https://www.encodeproject.org/files/ENCFF684BTP/@@download/ENCFF684BTP.bigWig GRCh38 released missing genetic modification characterization, low read depth ENCFF942MAF bigWig signal p-value ENCSR167JBG ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-DIDO1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF384DMV, ENCFF647OZY, ENCFF730MAX 1170573680 ENCODE Processing Pipeline 3dd079d20234bc852cae6aa55368cd77 https://www.encodeproject.org/files/ENCFF942MAF/@@download/ENCFF942MAF.bigWig GRCh38 released missing genetic modification characterization, low read depth ENCFF448WJZ bigWig fold change over control ENCSR167JBG ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-DIDO1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1 ENCFF647OZY, ENCFF730MAX 881438439 ENCODE Processing Pipeline 2aec10d8fc0d54e1a60e9bbe685733b8 https://www.encodeproject.org/files/ENCFF448WJZ/@@download/ENCFF448WJZ.bigWig GRCh38 released missing genetic modification characterization, low read depth ENCFF201FQM bigWig fold change over control ENCSR167JBG ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-DIDO1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 2 ENCFF384DMV, ENCFF647OZY 810672094 ENCODE Processing Pipeline 9d2d60e7468d3ab1a957b8f8fdbe2cee https://www.encodeproject.org/files/ENCFF201FQM/@@download/ENCFF201FQM.bigWig GRCh38 released missing genetic modification characterization, low read depth ENCFF090ECP bigWig fold change over control ENCSR167JBG ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-DIDO1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF384DMV, ENCFF647OZY, ENCFF730MAX 1284724071 ENCODE Processing Pipeline 9f9f23474ed403e664171d9e769c6358 https://www.encodeproject.org/files/ENCFF090ECP/@@download/ENCFF090ECP.bigWig GRCh38 released missing genetic modification characterization, low read depth ENCFF372WLC bed narrowPeak peaks ENCSR167JBG ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-DIDO1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1 ENCFF647OZY, ENCFF730MAX 6220212 ENCODE Processing Pipeline 8bdcefbf07262df0dba86c2c7bc35f03 https://www.encodeproject.org/files/ENCFF372WLC/@@download/ENCFF372WLC.bed.gz GRCh38 released missing genetic modification characterization, low read depth ENCFF304MSV bed narrowPeak peaks ENCSR167JBG ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-DIDO1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 2 ENCFF384DMV, ENCFF647OZY 6020442 ENCODE Processing Pipeline d02c6fbc78d8241adf3bcad678e6de39 https://www.encodeproject.org/files/ENCFF304MSV/@@download/ENCFF304MSV.bed.gz GRCh38 released missing genetic modification characterization, low read depth ENCFF452IVR bed narrowPeak peaks ENCSR167JBG ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-DIDO1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF384DMV, ENCFF647OZY, ENCFF730MAX 6942828 ENCODE Processing Pipeline 3d99a316d91b502dca9327b5d6444b73 https://www.encodeproject.org/files/ENCFF452IVR/@@download/ENCFF452IVR.bed.gz GRCh38 released missing genetic modification characterization, low read depth ENCFF297BPN bigBed narrowPeak peaks ENCSR167JBG ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-DIDO1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1 ENCFF372WLC 13332823 ENCODE Processing Pipeline 7708bac538f364058362c477d08b2a02 https://www.encodeproject.org/files/ENCFF297BPN/@@download/ENCFF297BPN.bigBed GRCh38 released missing genetic modification characterization, low read depth ENCFF367YZR bigBed narrowPeak peaks ENCSR167JBG ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-DIDO1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 2 ENCFF304MSV 13301106 ENCODE Processing Pipeline b445b5ca67de5cf2c14449193da633c7 https://www.encodeproject.org/files/ENCFF367YZR/@@download/ENCFF367YZR.bigBed GRCh38 released missing genetic modification characterization, low read depth ENCFF252CIT bigBed narrowPeak peaks ENCSR167JBG ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-DIDO1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF452IVR 13142959 ENCODE Processing Pipeline 1d55f91186dc3e2df6d7cf2b62130fa8 https://www.encodeproject.org/files/ENCFF252CIT/@@download/ENCFF252CIT.bigBed GRCh38 released missing genetic modification characterization, low read depth ENCFF724JQX bed narrowPeak conservative idr thresholded peaks ENCSR167JBG ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-DIDO1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF304MSV, ENCFF372WLC, ENCFF419RSJ, ENCFF452IVR 118143 ENCODE Processing Pipeline 19a03e405206433daf3e364a3ae4fb12 https://www.encodeproject.org/files/ENCFF724JQX/@@download/ENCFF724JQX.bed.gz GRCh38 released missing genetic modification characterization, low read depth ENCFF837YEY bigBed narrowPeak conservative idr thresholded peaks ENCSR167JBG ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-DIDO1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF724JQX 279566 ENCODE Processing Pipeline 300959ba113de91642730b17c900ae6e https://www.encodeproject.org/files/ENCFF837YEY/@@download/ENCFF837YEY.bigBed GRCh38 released missing genetic modification characterization, low read depth ENCFF108JFW bed narrowPeak optimal idr thresholded peaks ENCSR167JBG ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-DIDO1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF304MSV, ENCFF372WLC, ENCFF419RSJ, ENCFF452IVR 149217 ENCODE Processing Pipeline 5d8acef49b68b5aa5eb08a6fbe28e3c2 https://www.encodeproject.org/files/ENCFF108JFW/@@download/ENCFF108JFW.bed.gz GRCh38 released missing genetic modification characterization, low read depth ENCFF313XWR bigBed narrowPeak optimal idr thresholded peaks ENCSR167JBG ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-DIDO1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF108JFW 326000 ENCODE Processing Pipeline 4dfa173a42a3859ecaf85b66f782311e https://www.encodeproject.org/files/ENCFF313XWR/@@download/ENCFF313XWR.bigBed GRCh38 released missing genetic modification characterization, low read depth ENCFF514EUV bigBed narrowPeak optimal idr thresholded peaks ENCSR167JBG ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-DIDO1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF408SNO 233154 ENCODE Processing Pipeline 8a8c8ba58fd6dab122137c8329a06452 https://www.encodeproject.org/files/ENCFF514EUV/@@download/ENCFF514EUV.bigBed hg19 released missing genetic modification characterization, low read depth ENCFF322LZW bed narrowPeak conservative idr thresholded peaks ENCSR167JBG ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-DIDO1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF001TDO, ENCFF307MIA, ENCFF377KNC, ENCFF816UNQ 95844 ENCODE Processing Pipeline 91fb15bea82e901f80e5f72fd85629a4 https://www.encodeproject.org/files/ENCFF322LZW/@@download/ENCFF322LZW.bed.gz hg19 released missing genetic modification characterization, low read depth ENCFF815PKL bigBed narrowPeak conservative idr thresholded peaks ENCSR167JBG ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-DIDO1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF322LZW 201185 ENCODE Processing Pipeline f81c3858b79fbc4d14ed1c61f5870738 https://www.encodeproject.org/files/ENCFF815PKL/@@download/ENCFF815PKL.bigBed hg19 released missing genetic modification characterization, low read depth ENCFF408SNO bed narrowPeak optimal idr thresholded peaks ENCSR167JBG ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-DIDO1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF001TDO, ENCFF307MIA, ENCFF377KNC, ENCFF816UNQ 122119 ENCODE Processing Pipeline 303ed3ff929ea3bdad495908705d0662 https://www.encodeproject.org/files/ENCFF408SNO/@@download/ENCFF408SNO.bed.gz hg19 released missing genetic modification characterization, low read depth ENCFF252THD bam unfiltered alignments ENCSR138FUZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB000BEA DNA False 2014-07-07 ENCODE 2 36 ENCFF002EBK, ENCFF807MUK 1339154239 ENCODE Processing Pipeline f92119b1f046e1834ce261727da77020 https://www.encodeproject.org/files/ENCFF252THD/@@download/ENCFF252THD.bam hg19 released borderline replicate concordance, mild to moderate bottlenecking, low read length ENCFF798BDQ bam unfiltered alignments ENCSR138FUZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB000BEA DNA False 2014-07-07 ENCODE 1 36 ENCFF002EBI, ENCFF807MUK 1162166181 ENCODE Processing Pipeline 209ea2cbcfa16fce3ce69aece18bd063 https://www.encodeproject.org/files/ENCFF798BDQ/@@download/ENCFF798BDQ.bam hg19 released borderline replicate concordance, mild to moderate bottlenecking, low read length ENCFF661BAC bigWig signal p-value ENCSR138FUZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB000BEA DNA False 2014-07-07 ENCODE 1 ENCFF335IPE, ENCFF672FSO 606674361 ENCODE Processing Pipeline 9b8012e1fa453fe404388783822810db https://www.encodeproject.org/files/ENCFF661BAC/@@download/ENCFF661BAC.bigWig hg19 released borderline replicate concordance, mild to moderate bottlenecking, low read length ENCFF099UEJ bigWig fold change over control ENCSR138FUZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB000BEA DNA False 2014-07-07 ENCODE 1 ENCFF335IPE, ENCFF672FSO 450042450 ENCODE Processing Pipeline 9554edbb34560a11e75f97e59c1196a0 https://www.encodeproject.org/files/ENCFF099UEJ/@@download/ENCFF099UEJ.bigWig hg19 released borderline replicate concordance, mild to moderate bottlenecking, low read length ENCFF095PSZ bigWig signal p-value ENCSR138FUZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB000BEA DNA False 2014-07-07 ENCODE 2 ENCFF177GPP, ENCFF879OQC 473658598 ENCODE Processing Pipeline ac3319758661473bb5cb5989711d6b6b https://www.encodeproject.org/files/ENCFF095PSZ/@@download/ENCFF095PSZ.bigWig hg19 released borderline replicate concordance, mild to moderate bottlenecking, low read length ENCFF316YYL bigWig signal p-value ENCSR138FUZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB000BEA DNA False 2014-07-07 ENCODE 1, 2 ENCFF177GPP, ENCFF335IPE, ENCFF672FSO, ENCFF879OQC 907494542 ENCODE Processing Pipeline ba3543b772c2ddcddc5cc34dc686314b https://www.encodeproject.org/files/ENCFF316YYL/@@download/ENCFF316YYL.bigWig hg19 released borderline replicate concordance, mild to moderate bottlenecking, low read length ENCFF405SED bigWig fold change over control ENCSR138FUZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB000BEA DNA False 2014-07-07 ENCODE 2 ENCFF177GPP, ENCFF879OQC 472378358 ENCODE Processing Pipeline 82c29176c60b6f3a9452822a121f0e36 https://www.encodeproject.org/files/ENCFF405SED/@@download/ENCFF405SED.bigWig hg19 released borderline replicate concordance, mild to moderate bottlenecking, low read length ENCFF071CIY bigWig fold change over control ENCSR138FUZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB000BEA DNA False 2014-07-07 ENCODE 1, 2 ENCFF177GPP, ENCFF335IPE, ENCFF672FSO, ENCFF879OQC 1031893413 ENCODE Processing Pipeline cf94b7a786e241b3018e96db23251b88 https://www.encodeproject.org/files/ENCFF071CIY/@@download/ENCFF071CIY.bigWig hg19 released borderline replicate concordance, mild to moderate bottlenecking, low read length ENCFF617ITM bed narrowPeak peaks ENCSR138FUZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB000BEA DNA False 2014-07-07 ENCODE 1 ENCFF335IPE, ENCFF672FSO 5690731 ENCODE Processing Pipeline 47e8e4e99c49eeeb1c8a78ebac1096c1 https://www.encodeproject.org/files/ENCFF617ITM/@@download/ENCFF617ITM.bed.gz hg19 released borderline replicate concordance, mild to moderate bottlenecking, low read length ENCFF032IBC bed narrowPeak peaks ENCSR138FUZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB000BEA DNA False 2014-07-07 ENCODE 2 ENCFF177GPP, ENCFF879OQC 4360735 ENCODE Processing Pipeline 1e89a159174aa11f8b800978c23cddb4 https://www.encodeproject.org/files/ENCFF032IBC/@@download/ENCFF032IBC.bed.gz hg19 released borderline replicate concordance, mild to moderate bottlenecking, low read length ENCFF450ZAX bigBed narrowPeak peaks ENCSR138FUZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB000BEA DNA False 2014-07-07 ENCODE 1 ENCFF617ITM 13150893 ENCODE Processing Pipeline a5164f51e1eb7b8199f38bdfaf9ee375 https://www.encodeproject.org/files/ENCFF450ZAX/@@download/ENCFF450ZAX.bigBed hg19 released borderline replicate concordance, mild to moderate bottlenecking, low read length ENCFF378WOB bigBed narrowPeak peaks ENCSR138FUZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB000BEA DNA False 2014-07-07 ENCODE 2 ENCFF032IBC 10742790 ENCODE Processing Pipeline de8720c34679f3bd1d3fd1370311004a https://www.encodeproject.org/files/ENCFF378WOB/@@download/ENCFF378WOB.bigBed hg19 released borderline replicate concordance, mild to moderate bottlenecking, low read length ENCFF700KUP bigBed narrowPeak optimal idr thresholded peaks ENCSR138FUZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB000BEA DNA False 2014-07-07 ENCODE 1, 2 ENCFF987VNY 225447 ENCODE Processing Pipeline 7611217311594d351755974e9ddc79ad https://www.encodeproject.org/files/ENCFF700KUP/@@download/ENCFF700KUP.bigBed hg19 released borderline replicate concordance, mild to moderate bottlenecking, low read length ENCFF230YWY bed narrowPeak peaks ENCSR138FUZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB000BEA DNA False 2014-07-07 ENCODE 1, 2 ENCFF177GPP, ENCFF335IPE, ENCFF672FSO, ENCFF879OQC 6600810 ENCODE Processing Pipeline 42987e044018b6ca7bb5e8f4d0fdb977 https://www.encodeproject.org/files/ENCFF230YWY/@@download/ENCFF230YWY.bed.gz hg19 released borderline replicate concordance, mild to moderate bottlenecking, low read length ENCFF885TLC bed narrowPeak conservative idr thresholded peaks ENCSR138FUZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB000BEA DNA False 2014-07-07 ENCODE 1, 2 ENCFF001TDO, ENCFF032IBC, ENCFF230YWY, ENCFF617ITM 48809 ENCODE Processing Pipeline 1cac586249e786fa9b03c6b0ff37bb13 https://www.encodeproject.org/files/ENCFF885TLC/@@download/ENCFF885TLC.bed.gz hg19 released borderline replicate concordance, mild to moderate bottlenecking, low read length ENCFF987VNY bed narrowPeak optimal idr thresholded peaks ENCSR138FUZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB000BEA DNA False 2014-07-07 ENCODE 1, 2 ENCFF001TDO, ENCFF032IBC, ENCFF230YWY, ENCFF617ITM 90032 ENCODE Processing Pipeline f36811713a2ca68357a6462a9526b2a4 https://www.encodeproject.org/files/ENCFF987VNY/@@download/ENCFF987VNY.bed.gz hg19 released borderline replicate concordance, mild to moderate bottlenecking, low read length ENCFF048WWZ bigBed narrowPeak peaks ENCSR138FUZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB000BEA DNA False 2014-07-07 ENCODE 1, 2 ENCFF230YWY 13290313 ENCODE Processing Pipeline 083b0939a558de773703e0401fd7350a https://www.encodeproject.org/files/ENCFF048WWZ/@@download/ENCFF048WWZ.bigBed hg19 released borderline replicate concordance, mild to moderate bottlenecking, low read length ENCFF319AUS bigBed narrowPeak conservative idr thresholded peaks ENCSR138FUZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB000BEA DNA False 2014-07-07 ENCODE 1, 2 ENCFF885TLC 131871 ENCODE Processing Pipeline fcdf70e6248b5f964739eb3a7ef4017a https://www.encodeproject.org/files/ENCFF319AUS/@@download/ENCFF319AUS.bigBed hg19 released borderline replicate concordance, mild to moderate bottlenecking, low read length ENCFF002EBI fastq reads ENCSR138FUZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB000BEA DNA False 2014-07-07 ENCODE 1 1 36 single-ended 804969536 Michael Snyder, Stanford e0f222593b83b834a14f9d8ddd37b5ab SRA:SRR5111174 https://www.encodeproject.org/files/ENCFF002EBI/@@download/ENCFF002EBI.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF002ECW/ released borderline replicate concordance, mild to moderate bottlenecking, low read length ENCFF002EBK fastq reads ENCSR138FUZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB000BEA DNA False 2014-07-07 ENCODE 2 1 36 single-ended 968584398 Michael Snyder, Stanford d5dda4819dba0849fb3488e887dcaf21 SRA:SRR5111173 https://www.encodeproject.org/files/ENCFF002EBK/@@download/ENCFF002EBK.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF002ECS/ released borderline replicate concordance, mild to moderate bottlenecking, low read length ENCFF672FSO bam alignments ENCSR138FUZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB000BEA DNA False 2014-07-07 ENCODE 1 36 ENCFF002EBI, ENCFF807MUK 838429818 ENCODE Processing Pipeline a26700ec2287ea9bdc67e5b161d291b1 https://www.encodeproject.org/files/ENCFF672FSO/@@download/ENCFF672FSO.bam hg19 released borderline replicate concordance, mild to moderate bottlenecking, low read length ENCFF177GPP bam alignments ENCSR138FUZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB000BEA DNA False 2014-07-07 ENCODE 2 36 ENCFF002EBK, ENCFF807MUK 860442904 ENCODE Processing Pipeline 0167cdd675db5b82b018267b99551e26 https://www.encodeproject.org/files/ENCFF177GPP/@@download/ENCFF177GPP.bam hg19 released borderline replicate concordance, mild to moderate bottlenecking, low read length ENCFF161UDX bigWig signal p-value ENCSR138FUZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB000BEA DNA False 2014-07-07 ENCODE 1 ENCFF335IPE, ENCFF672FSO 607383472 ENCODE Processing Pipeline d8c6a3e4aa7b2dd31be255478961c96e https://www.encodeproject.org/files/ENCFF161UDX/@@download/ENCFF161UDX.bigWig hg19 archived borderline replicate concordance, mild to moderate bottlenecking, low read length ENCFF030GCY bigWig signal p-value ENCSR138FUZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB000BEA DNA False 2014-07-07 ENCODE 2 ENCFF177GPP, ENCFF879OQC 470498717 ENCODE Processing Pipeline 40b400b49b46e07b2295a05eaeeeb86b https://www.encodeproject.org/files/ENCFF030GCY/@@download/ENCFF030GCY.bigWig hg19 archived borderline replicate concordance, mild to moderate bottlenecking, low read length ENCFF307KUU bigWig signal p-value ENCSR138FUZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB000BEA DNA False 2014-07-07 ENCODE 1, 2 ENCFF177GPP, ENCFF335IPE, ENCFF672FSO, ENCFF879OQC 897565660 ENCODE Processing Pipeline 3d9718015a30474f513c71542171a3e0 https://www.encodeproject.org/files/ENCFF307KUU/@@download/ENCFF307KUU.bigWig hg19 archived borderline replicate concordance, mild to moderate bottlenecking, low read length ENCFF555GBI bigWig fold change over control ENCSR138FUZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB000BEA DNA False 2014-07-07 ENCODE 1 ENCFF335IPE, ENCFF672FSO 455159254 ENCODE Processing Pipeline 1adeef6cf64bfa8ab51b2e210e0de4f5 https://www.encodeproject.org/files/ENCFF555GBI/@@download/ENCFF555GBI.bigWig hg19 archived borderline replicate concordance, mild to moderate bottlenecking, low read length ENCFF630MMB bigWig fold change over control ENCSR138FUZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB000BEA DNA False 2014-07-07 ENCODE 2 ENCFF177GPP, ENCFF879OQC 473763160 ENCODE Processing Pipeline 8b5521ba628d62c9859a2e17dbbe4efb https://www.encodeproject.org/files/ENCFF630MMB/@@download/ENCFF630MMB.bigWig hg19 archived borderline replicate concordance, mild to moderate bottlenecking, low read length ENCFF423RVZ bigWig fold change over control ENCSR138FUZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB000BEA DNA False 2014-07-07 ENCODE 1, 2 ENCFF177GPP, ENCFF335IPE, ENCFF672FSO, ENCFF879OQC 996578283 ENCODE Processing Pipeline 99bccb5c1d44cc55eb25c3df6f3d80de https://www.encodeproject.org/files/ENCFF423RVZ/@@download/ENCFF423RVZ.bigWig hg19 archived borderline replicate concordance, mild to moderate bottlenecking, low read length ENCFF905VIC bed narrowPeak peaks ENCSR138FUZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB000BEA DNA False 2014-07-07 ENCODE 1, 2 ENCFF177GPP, ENCFF335IPE, ENCFF672FSO, ENCFF879OQC 6738545 ENCODE Processing Pipeline 6b75de55d0db26aa3bc12a2c6d66f215 https://www.encodeproject.org/files/ENCFF905VIC/@@download/ENCFF905VIC.bed.gz hg19 archived borderline replicate concordance, mild to moderate bottlenecking, low read length ENCFF558QUM bed narrowPeak peaks ENCSR138FUZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB000BEA DNA False 2014-07-07 ENCODE 1 ENCFF335IPE, ENCFF672FSO 5904108 ENCODE Processing Pipeline b80370bc9652a73cb54822a4fd3c9a3b https://www.encodeproject.org/files/ENCFF558QUM/@@download/ENCFF558QUM.bed.gz hg19 archived borderline replicate concordance, mild to moderate bottlenecking, low read length ENCFF533MTU bed narrowPeak peaks ENCSR138FUZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB000BEA DNA False 2014-07-07 ENCODE 2 ENCFF177GPP, ENCFF879OQC 4533441 ENCODE Processing Pipeline ea922578f229cf2741b1dd492b421187 https://www.encodeproject.org/files/ENCFF533MTU/@@download/ENCFF533MTU.bed.gz hg19 archived borderline replicate concordance, mild to moderate bottlenecking, low read length ENCFF994LDV bigBed narrowPeak peaks ENCSR138FUZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB000BEA DNA False 2014-07-07 ENCODE 1 ENCFF558QUM 13202994 ENCODE Processing Pipeline 8d6cb7ddd0415806726a0323d408f033 https://www.encodeproject.org/files/ENCFF994LDV/@@download/ENCFF994LDV.bigBed hg19 archived borderline replicate concordance, mild to moderate bottlenecking, low read length ENCFF864VFN bigBed narrowPeak peaks ENCSR138FUZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB000BEA DNA False 2014-07-07 ENCODE 1, 2 ENCFF905VIC 13295523 ENCODE Processing Pipeline 0dd016c890d9497c7d3e6cd80f513df1 https://www.encodeproject.org/files/ENCFF864VFN/@@download/ENCFF864VFN.bigBed hg19 archived borderline replicate concordance, mild to moderate bottlenecking, low read length ENCFF071TTV bigBed narrowPeak peaks ENCSR138FUZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB000BEA DNA False 2014-07-07 ENCODE 2 ENCFF533MTU 10958223 ENCODE Processing Pipeline ab8de6f3067257556768a26ad5ca1e02 https://www.encodeproject.org/files/ENCFF071TTV/@@download/ENCFF071TTV.bigBed hg19 archived borderline replicate concordance, mild to moderate bottlenecking, low read length ENCFF719EJR bam unfiltered alignments ENCSR138FUZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB000BEA DNA False 2014-07-07 ENCODE 1 36 ENCFF002EBI, ENCFF643CGH 1166797748 ENCODE Processing Pipeline 5b5af29b2d67ef662b08990808a6edab https://www.encodeproject.org/files/ENCFF719EJR/@@download/ENCFF719EJR.bam GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, low read length ENCFF880ODJ bam alignments ENCSR138FUZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB000BEA DNA False 2014-07-07 ENCODE 2 36 ENCFF002EBK, ENCFF643CGH 859812040 ENCODE Processing Pipeline dbbbab4563e8df5497395badf2af1024 https://www.encodeproject.org/files/ENCFF880ODJ/@@download/ENCFF880ODJ.bam GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, low read length ENCFF302ALX bam unfiltered alignments ENCSR138FUZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB000BEA DNA False 2014-07-07 ENCODE 2 36 ENCFF002EBK, ENCFF643CGH 1345235706 ENCODE Processing Pipeline 631c557fe9bef24adc5c3f3576fe471d https://www.encodeproject.org/files/ENCFF302ALX/@@download/ENCFF302ALX.bam GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, low read length ENCFF726AYE bam alignments ENCSR138FUZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB000BEA DNA False 2014-07-07 ENCODE 1 36 ENCFF002EBI, ENCFF643CGH 837797765 ENCODE Processing Pipeline 2bf210d389812a4e36bf06d0f9923f56 https://www.encodeproject.org/files/ENCFF726AYE/@@download/ENCFF726AYE.bam GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, low read length ENCFF173QPA bigWig signal p-value ENCSR138FUZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB000BEA DNA False 2014-07-07 ENCODE 1 ENCFF156FED, ENCFF726AYE 519467225 ENCODE Processing Pipeline 45bdfbda660452ab5cbc2eefb7611fab https://www.encodeproject.org/files/ENCFF173QPA/@@download/ENCFF173QPA.bigWig GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, low read length ENCFF755KGD bigWig signal p-value ENCSR138FUZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB000BEA DNA False 2014-07-07 ENCODE 2 ENCFF577FNG, ENCFF880ODJ 536526373 ENCODE Processing Pipeline 883eb14d13e0167e0aa70c9e17733dba https://www.encodeproject.org/files/ENCFF755KGD/@@download/ENCFF755KGD.bigWig GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, low read length ENCFF012XTI bigWig signal p-value ENCSR138FUZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB000BEA DNA False 2014-07-07 ENCODE 1, 2 ENCFF156FED, ENCFF577FNG, ENCFF726AYE, ENCFF880ODJ 984888283 ENCODE Processing Pipeline e3839e3f8e77ec55b0d55d6ef660ab8c https://www.encodeproject.org/files/ENCFF012XTI/@@download/ENCFF012XTI.bigWig GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, low read length ENCFF768POO bigWig fold change over control ENCSR138FUZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB000BEA DNA False 2014-07-07 ENCODE 1 ENCFF156FED, ENCFF726AYE 457152909 ENCODE Processing Pipeline 1c1b9d758e089b9bfe3e210548916ffc https://www.encodeproject.org/files/ENCFF768POO/@@download/ENCFF768POO.bigWig GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, low read length ENCFF641ZLF bigWig fold change over control ENCSR138FUZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB000BEA DNA False 2014-07-07 ENCODE 2 ENCFF577FNG, ENCFF880ODJ 469919275 ENCODE Processing Pipeline 6e083a7b7831efd1ab3dc472d459db95 https://www.encodeproject.org/files/ENCFF641ZLF/@@download/ENCFF641ZLF.bigWig GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, low read length ENCFF786JIS bigWig fold change over control ENCSR138FUZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB000BEA DNA False 2014-07-07 ENCODE 1, 2 ENCFF156FED, ENCFF577FNG, ENCFF726AYE, ENCFF880ODJ 1031254357 ENCODE Processing Pipeline 1da3fe4efe5cdc36a62d350648c4815c https://www.encodeproject.org/files/ENCFF786JIS/@@download/ENCFF786JIS.bigWig GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, low read length ENCFF694OAS bed narrowPeak peaks ENCSR138FUZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB000BEA DNA False 2014-07-07 ENCODE 1 ENCFF156FED, ENCFF726AYE 5624816 ENCODE Processing Pipeline 542b62ec94b073e2b47f0aea5c2bee1d https://www.encodeproject.org/files/ENCFF694OAS/@@download/ENCFF694OAS.bed.gz GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, low read length ENCFF908MOD bed narrowPeak peaks ENCSR138FUZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB000BEA DNA False 2014-07-07 ENCODE 2 ENCFF577FNG, ENCFF880ODJ 4340622 ENCODE Processing Pipeline 7a733374cec02db3a79c657b51575f64 https://www.encodeproject.org/files/ENCFF908MOD/@@download/ENCFF908MOD.bed.gz GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, low read length ENCFF326CMY bed narrowPeak peaks ENCSR138FUZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB000BEA DNA False 2014-07-07 ENCODE 1, 2 ENCFF156FED, ENCFF577FNG, ENCFF726AYE, ENCFF880ODJ 6552272 ENCODE Processing Pipeline 177939b5b1b40e14a1170bef4ce58660 https://www.encodeproject.org/files/ENCFF326CMY/@@download/ENCFF326CMY.bed.gz GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, low read length ENCFF249TAE bigBed narrowPeak peaks ENCSR138FUZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB000BEA DNA False 2014-07-07 ENCODE 2 ENCFF908MOD 10768589 ENCODE Processing Pipeline 1542814c5cc0568033e287c7d7ac1acb https://www.encodeproject.org/files/ENCFF249TAE/@@download/ENCFF249TAE.bigBed GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, low read length ENCFF540QOV bigBed narrowPeak peaks ENCSR138FUZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB000BEA DNA False 2014-07-07 ENCODE 1 ENCFF694OAS 13154105 ENCODE Processing Pipeline 68f495af9172528bbcc5d4fa59d99a0a https://www.encodeproject.org/files/ENCFF540QOV/@@download/ENCFF540QOV.bigBed GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, low read length ENCFF401CPB bigBed narrowPeak peaks ENCSR138FUZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB000BEA DNA False 2014-07-07 ENCODE 1, 2 ENCFF326CMY 13304966 ENCODE Processing Pipeline 81a003f94d4b6405c10c5d759c11aae1 https://www.encodeproject.org/files/ENCFF401CPB/@@download/ENCFF401CPB.bigBed GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, low read length ENCFF876CPX bed narrowPeak conservative idr thresholded peaks ENCSR138FUZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB000BEA DNA False 2014-07-07 ENCODE 1, 2 ENCFF326CMY, ENCFF419RSJ, ENCFF694OAS, ENCFF908MOD 50145 ENCODE Processing Pipeline 4ea5f35f9ef0ebea8231a27f1ae5909e https://www.encodeproject.org/files/ENCFF876CPX/@@download/ENCFF876CPX.bed.gz GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, low read length ENCFF911MZZ bigBed narrowPeak conservative idr thresholded peaks ENCSR138FUZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB000BEA DNA False 2014-07-07 ENCODE 1, 2 ENCFF876CPX 134745 ENCODE Processing Pipeline 7c51a453692d766ae410646286370e08 https://www.encodeproject.org/files/ENCFF911MZZ/@@download/ENCFF911MZZ.bigBed GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, low read length ENCFF820LKT bed narrowPeak optimal idr thresholded peaks ENCSR138FUZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB000BEA DNA False 2014-07-07 ENCODE 1, 2 ENCFF326CMY, ENCFF419RSJ, ENCFF694OAS, ENCFF908MOD 91248 ENCODE Processing Pipeline 222287580210015da4086a1003fa371e https://www.encodeproject.org/files/ENCFF820LKT/@@download/ENCFF820LKT.bed.gz GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, low read length ENCFF245PFI bigBed narrowPeak optimal idr thresholded peaks ENCSR138FUZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB000BEA DNA False 2014-07-07 ENCODE 1, 2 ENCFF820LKT 228906 ENCODE Processing Pipeline fe8f474369e0e46242ffedb849362570 https://www.encodeproject.org/files/ENCFF245PFI/@@download/ENCFF245PFI.bigBed GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, low read length ENCFF379WER bed narrowPeak conservative idr thresholded peaks ENCSR138FUZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB000BEA DNA False 2014-07-07 ENCODE 1, 2 ENCFF001TDO, ENCFF533MTU, ENCFF558QUM, ENCFF905VIC 42338 ENCODE Processing Pipeline e47fc91f1c855e2d37f4de9792ce89a0 https://www.encodeproject.org/files/ENCFF379WER/@@download/ENCFF379WER.bed.gz hg19 archived borderline replicate concordance, mild to moderate bottlenecking, low read length ENCFF667XSX bigBed narrowPeak conservative idr thresholded peaks ENCSR138FUZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB000BEA DNA False 2014-07-07 ENCODE 1, 2 ENCFF379WER 123344 ENCODE Processing Pipeline af1fd737de256391a293bbeb10775976 https://www.encodeproject.org/files/ENCFF667XSX/@@download/ENCFF667XSX.bigBed hg19 archived borderline replicate concordance, mild to moderate bottlenecking, low read length ENCFF232DLG bigBed narrowPeak optimal idr thresholded peaks ENCSR138FUZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB000BEA DNA False 2014-07-07 ENCODE 1, 2 ENCFF485MXM 170430 ENCODE Processing Pipeline ab2ac1934322834f59afc0b31bd9fda8 https://www.encodeproject.org/files/ENCFF232DLG/@@download/ENCFF232DLG.bigBed hg19 archived borderline replicate concordance, mild to moderate bottlenecking, low read length ENCFF485MXM bed narrowPeak optimal idr thresholded peaks ENCSR138FUZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB000BEA DNA False 2014-07-07 ENCODE 1, 2 ENCFF001TDO, ENCFF533MTU, ENCFF558QUM, ENCFF905VIC 76440 ENCODE Processing Pipeline cfb6a3095d48e09ffa9b902b0cdc7fa7 https://www.encodeproject.org/files/ENCFF485MXM/@@download/ENCFF485MXM.bed.gz hg19 archived borderline replicate concordance, mild to moderate bottlenecking, low read length ENCFF408DMA bam unfiltered alignments ENCSR322CFO ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZEB2-human ENCAB996GAH DNA False 2016-06-14 ENCODE 2 100 ENCFF776VEC, ENCFF807MUK, ENCFF824ADC 6162790775 ENCODE Processing Pipeline 05f0010a1576438fb7729394275a5781 https://www.encodeproject.org/files/ENCFF408DMA/@@download/ENCFF408DMA.bam hg19 released ENCFF852GJO bam unfiltered alignments ENCSR322CFO ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZEB2-human ENCAB996GAH DNA False 2016-06-14 ENCODE 1 100 ENCFF349FIQ, ENCFF807MUK, ENCFF845FIV 4596937297 ENCODE Processing Pipeline 7093132128d4d1011f2a75dfd6ce706b https://www.encodeproject.org/files/ENCFF852GJO/@@download/ENCFF852GJO.bam hg19 released ENCFF776VEC fastq reads ENCSR322CFO ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZEB2-human ENCAB996GAH DNA False 2016-06-14 ENCODE 2 1 100 paired-ended 1 ENCFF824ADC 2900769036 Michael Snyder, Stanford 2609c57a4f5e25beb3051b50f481907c SRA:SRR5111418 https://www.encodeproject.org/files/ENCFF776VEC/@@download/ENCFF776VEC.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFD/ released ENCFF845FIV fastq reads ENCSR322CFO ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZEB2-human ENCAB996GAH DNA False 2016-06-14 ENCODE 1 1 100 paired-ended 1 ENCFF349FIQ 2102473935 Michael Snyder, Stanford be3c429c83bb3978c697195630e5819c SRA:SRR5111419 https://www.encodeproject.org/files/ENCFF845FIV/@@download/ENCFF845FIV.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFF/ released ENCFF349FIQ fastq reads ENCSR322CFO ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZEB2-human ENCAB996GAH DNA False 2016-06-14 ENCODE 1 1 100 paired-ended 2 ENCFF845FIV 2150728626 Michael Snyder, Stanford cb3b0f3ded41b26a720b965e9d01d93d SRA:SRR5111419 https://www.encodeproject.org/files/ENCFF349FIQ/@@download/ENCFF349FIQ.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFH/ released ENCFF824ADC fastq reads ENCSR322CFO ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZEB2-human ENCAB996GAH DNA False 2016-06-14 ENCODE 2 1 100 paired-ended 2 ENCFF776VEC 2902414297 Michael Snyder, Stanford 0790532abd2140b647745cbfd06adbf2 SRA:SRR5111418 https://www.encodeproject.org/files/ENCFF824ADC/@@download/ENCFF824ADC.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFA/ released ENCFF875HFU bam alignments ENCSR322CFO ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZEB2-human ENCAB996GAH DNA False 2016-06-14 ENCODE 1 100 ENCFF349FIQ, ENCFF807MUK, ENCFF845FIV 3821353751 ENCODE Processing Pipeline 2cef74bfbe9c61120273fcee9457e24d https://www.encodeproject.org/files/ENCFF875HFU/@@download/ENCFF875HFU.bam hg19 released ENCFF666BDF bam alignments ENCSR322CFO ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZEB2-human ENCAB996GAH DNA False 2016-06-14 ENCODE 2 100 ENCFF776VEC, ENCFF807MUK, ENCFF824ADC 4897300583 ENCODE Processing Pipeline 1946aa897e52402d73ec120ae8cc9b81 https://www.encodeproject.org/files/ENCFF666BDF/@@download/ENCFF666BDF.bam hg19 released ENCFF433NFO bigWig signal p-value ENCSR322CFO ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZEB2-human ENCAB996GAH DNA False 2016-06-14 ENCODE 2 ENCFF051LWI, ENCFF666BDF 1127147210 ENCODE Processing Pipeline 760ff8ba22b8b28a2005d1669207dd1e https://www.encodeproject.org/files/ENCFF433NFO/@@download/ENCFF433NFO.bigWig hg19 released ENCFF058RSO bigWig signal p-value ENCSR322CFO ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZEB2-human ENCAB996GAH DNA False 2016-06-14 ENCODE 1, 2 ENCFF051LWI, ENCFF581ZJL, ENCFF666BDF, ENCFF875HFU 2108168265 ENCODE Processing Pipeline f0d989680af6cc7fae5efb0bc3e3ad3f https://www.encodeproject.org/files/ENCFF058RSO/@@download/ENCFF058RSO.bigWig hg19 released ENCFF025FKA bigWig fold change over control ENCSR322CFO ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZEB2-human ENCAB996GAH DNA False 2016-06-14 ENCODE 2 ENCFF051LWI, ENCFF666BDF 1139919642 ENCODE Processing Pipeline 89028f2a159147a7db3ed5abb526d515 https://www.encodeproject.org/files/ENCFF025FKA/@@download/ENCFF025FKA.bigWig hg19 released ENCFF120VOJ bigWig fold change over control ENCSR322CFO ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZEB2-human ENCAB996GAH DNA False 2016-06-14 ENCODE 1, 2 ENCFF051LWI, ENCFF581ZJL, ENCFF666BDF, ENCFF875HFU 2087905037 ENCODE Processing Pipeline 502979c03897eff7d8d6a215a633bf96 https://www.encodeproject.org/files/ENCFF120VOJ/@@download/ENCFF120VOJ.bigWig hg19 released ENCFF682MBJ bam unfiltered alignments ENCSR322CFO ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZEB2-human ENCAB996GAH DNA False 2016-06-14 ENCODE 1 100 ENCFF349FIQ, ENCFF643CGH, ENCFF845FIV 4600894427 ENCODE Processing Pipeline 9ac2d2fd9ca013c8ef025d5dc84c09b8 https://www.encodeproject.org/files/ENCFF682MBJ/@@download/ENCFF682MBJ.bam GRCh38 released ENCFF924RVG bam unfiltered alignments ENCSR322CFO ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZEB2-human ENCAB996GAH DNA False 2016-06-14 ENCODE 2 100 ENCFF643CGH, ENCFF776VEC, ENCFF824ADC 6167426344 ENCODE Processing Pipeline 9a963eae949b9f56d1e4c875de44ea37 https://www.encodeproject.org/files/ENCFF924RVG/@@download/ENCFF924RVG.bam GRCh38 released ENCFF500YYZ bam alignments ENCSR322CFO ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZEB2-human ENCAB996GAH DNA False 2016-06-14 ENCODE 1 100 ENCFF349FIQ, ENCFF643CGH, ENCFF845FIV 3823902143 ENCODE Processing Pipeline 47cc1ad8f932c7a6dada82bb38d05a30 https://www.encodeproject.org/files/ENCFF500YYZ/@@download/ENCFF500YYZ.bam GRCh38 released ENCFF717OYW bam alignments ENCSR322CFO ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZEB2-human ENCAB996GAH DNA False 2016-06-14 ENCODE 2 100 ENCFF643CGH, ENCFF776VEC, ENCFF824ADC 4899233705 ENCODE Processing Pipeline 010d8d9a8297f4fe2ee8886476426617 https://www.encodeproject.org/files/ENCFF717OYW/@@download/ENCFF717OYW.bam GRCh38 released ENCFF058YNG bigWig signal p-value ENCSR322CFO ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZEB2-human ENCAB996GAH DNA False 2016-06-14 ENCODE 1 ENCFF500YYZ, ENCFF910IKB 1011782830 ENCODE Processing Pipeline f13531fec502ffe9388c3fbfcfaa7276 https://www.encodeproject.org/files/ENCFF058YNG/@@download/ENCFF058YNG.bigWig GRCh38 released ENCFF490NGF bigWig signal p-value ENCSR322CFO ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZEB2-human ENCAB996GAH DNA False 2016-06-14 ENCODE 2 ENCFF227IZS, ENCFF717OYW 1032451926 ENCODE Processing Pipeline 6582ecd26b62d82df3b26bee6419a2bd https://www.encodeproject.org/files/ENCFF490NGF/@@download/ENCFF490NGF.bigWig GRCh38 released ENCFF782FQH bigWig signal p-value ENCSR322CFO ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZEB2-human ENCAB996GAH DNA False 2016-06-14 ENCODE 1, 2 ENCFF227IZS, ENCFF500YYZ, ENCFF717OYW, ENCFF910IKB 1897482371 ENCODE Processing Pipeline 32aa93beb1d1e8da08299f5b576b2bf8 https://www.encodeproject.org/files/ENCFF782FQH/@@download/ENCFF782FQH.bigWig GRCh38 released ENCFF870HUB bigWig fold change over control ENCSR322CFO ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZEB2-human ENCAB996GAH DNA False 2016-06-14 ENCODE 1 ENCFF500YYZ, ENCFF910IKB 1123758029 ENCODE Processing Pipeline 8fbfdc4ff2847fc9e6aabbf980427c33 https://www.encodeproject.org/files/ENCFF870HUB/@@download/ENCFF870HUB.bigWig GRCh38 released ENCFF445THV bigWig fold change over control ENCSR322CFO ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZEB2-human ENCAB996GAH DNA False 2016-06-14 ENCODE 2 ENCFF227IZS, ENCFF717OYW 1140314795 ENCODE Processing Pipeline 5dc1aeb487b8191121582711dd27ae7b https://www.encodeproject.org/files/ENCFF445THV/@@download/ENCFF445THV.bigWig GRCh38 released ENCFF498ZJU bigWig fold change over control ENCSR322CFO ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZEB2-human ENCAB996GAH DNA False 2016-06-14 ENCODE 1, 2 ENCFF227IZS, ENCFF500YYZ, ENCFF717OYW, ENCFF910IKB 2122686870 ENCODE Processing Pipeline ede238f10b9336ff50878cca2736aa75 https://www.encodeproject.org/files/ENCFF498ZJU/@@download/ENCFF498ZJU.bigWig GRCh38 released ENCFF722AOG bed narrowPeak peaks ENCSR322CFO ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZEB2-human ENCAB996GAH DNA False 2016-06-14 ENCODE 1 ENCFF500YYZ, ENCFF910IKB 6762980 ENCODE Processing Pipeline 33d4328fe4ff3a472edff81bf8f5d566 https://www.encodeproject.org/files/ENCFF722AOG/@@download/ENCFF722AOG.bed.gz GRCh38 released ENCFF155HVK bed narrowPeak peaks ENCSR322CFO ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZEB2-human ENCAB996GAH DNA False 2016-06-14 ENCODE 2 ENCFF227IZS, ENCFF717OYW 6948068 ENCODE Processing Pipeline 02fd518818560c28ed20ed98f4c291bd https://www.encodeproject.org/files/ENCFF155HVK/@@download/ENCFF155HVK.bed.gz GRCh38 released ENCFF316ASR bed narrowPeak peaks ENCSR322CFO ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZEB2-human ENCAB996GAH DNA False 2016-06-14 ENCODE 1, 2 ENCFF227IZS, ENCFF500YYZ, ENCFF717OYW, ENCFF910IKB 7235161 ENCODE Processing Pipeline 50e19bd44174bb286aa28ae2a15e7b8f https://www.encodeproject.org/files/ENCFF316ASR/@@download/ENCFF316ASR.bed.gz GRCh38 released ENCFF116CHF bigBed narrowPeak peaks ENCSR322CFO ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZEB2-human ENCAB996GAH DNA False 2016-06-14 ENCODE 1 ENCFF722AOG 13236999 ENCODE Processing Pipeline 08cf6f0a0a5b037c27758091d27a0aa1 https://www.encodeproject.org/files/ENCFF116CHF/@@download/ENCFF116CHF.bigBed GRCh38 released ENCFF061VHJ bigBed narrowPeak peaks ENCSR322CFO ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZEB2-human ENCAB996GAH DNA False 2016-06-14 ENCODE 2 ENCFF155HVK 13147946 ENCODE Processing Pipeline 0338e747db96ff7857f78204b69de8fe https://www.encodeproject.org/files/ENCFF061VHJ/@@download/ENCFF061VHJ.bigBed GRCh38 released ENCFF147ZDD bigBed narrowPeak peaks ENCSR322CFO ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZEB2-human ENCAB996GAH DNA False 2016-06-14 ENCODE 1, 2 ENCFF316ASR 12965213 ENCODE Processing Pipeline 03535ac67e2b43e535f760c6d6328934 https://www.encodeproject.org/files/ENCFF147ZDD/@@download/ENCFF147ZDD.bigBed GRCh38 released ENCFF319TPR bed narrowPeak conservative idr thresholded peaks ENCSR322CFO ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZEB2-human ENCAB996GAH DNA False 2016-06-14 ENCODE 1, 2 ENCFF155HVK, ENCFF316ASR, ENCFF419RSJ, ENCFF722AOG 308195 ENCODE Processing Pipeline 9cd65cf4f07b83af35770c4a098fd4c6 https://www.encodeproject.org/files/ENCFF319TPR/@@download/ENCFF319TPR.bed.gz GRCh38 released ENCFF048SFX bigBed narrowPeak conservative idr thresholded peaks ENCSR322CFO ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZEB2-human ENCAB996GAH DNA False 2016-06-14 ENCODE 1, 2 ENCFF319TPR 673733 ENCODE Processing Pipeline ecc3c9aa4c229f06473a3c4e6d37cac0 https://www.encodeproject.org/files/ENCFF048SFX/@@download/ENCFF048SFX.bigBed GRCh38 released ENCFF553KIK bed narrowPeak optimal idr thresholded peaks ENCSR322CFO ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZEB2-human ENCAB996GAH DNA False 2016-06-14 ENCODE 1, 2 ENCFF155HVK, ENCFF316ASR, ENCFF419RSJ, ENCFF722AOG 416663 ENCODE Processing Pipeline a5af5857bfbc3bfc8fea09cb90e67a16 https://www.encodeproject.org/files/ENCFF553KIK/@@download/ENCFF553KIK.bed.gz GRCh38 released ENCFF311HAR bigBed narrowPeak optimal idr thresholded peaks ENCSR322CFO ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZEB2-human ENCAB996GAH DNA False 2016-06-14 ENCODE 1, 2 ENCFF553KIK 843316 ENCODE Processing Pipeline 1154c5d56042354c180f912da61d5e47 https://www.encodeproject.org/files/ENCFF311HAR/@@download/ENCFF311HAR.bigBed GRCh38 released ENCFF909JNU bigWig signal p-value ENCSR322CFO ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZEB2-human ENCAB996GAH DNA False 2016-06-14 ENCODE 1 ENCFF581ZJL, ENCFF875HFU 1085262255 ENCODE Processing Pipeline 3fce664502e520aefd6cac7dc9f1b6ab https://www.encodeproject.org/files/ENCFF909JNU/@@download/ENCFF909JNU.bigWig hg19 released ENCFF865EQG bigWig fold change over control ENCSR322CFO ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZEB2-human ENCAB996GAH DNA False 2016-06-14 ENCODE 1 ENCFF581ZJL, ENCFF875HFU 1144406084 ENCODE Processing Pipeline d3a59c5cb47b7eaacc979f3a032d5c3e https://www.encodeproject.org/files/ENCFF865EQG/@@download/ENCFF865EQG.bigWig hg19 released ENCFF129WGK bigBed narrowPeak optimal idr thresholded peaks ENCSR322CFO ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZEB2-human ENCAB996GAH DNA False 2016-06-14 ENCODE 1, 2 ENCFF407AOX 840883 ENCODE Processing Pipeline 0405307fe887b3d6b2a14112e3d741c5 https://www.encodeproject.org/files/ENCFF129WGK/@@download/ENCFF129WGK.bigBed hg19 released ENCFF809AGT bigBed narrowPeak peaks ENCSR322CFO ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZEB2-human ENCAB996GAH DNA False 2016-06-14 ENCODE 2 ENCFF295KFV 13122911 ENCODE Processing Pipeline 01372e3c68cc772397ad4410a3ca1379 https://www.encodeproject.org/files/ENCFF809AGT/@@download/ENCFF809AGT.bigBed hg19 released ENCFF837KWS bigBed narrowPeak peaks ENCSR322CFO ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZEB2-human ENCAB996GAH DNA False 2016-06-14 ENCODE 1 ENCFF597MUA 13227457 ENCODE Processing Pipeline 67ba52a20096768128916562b0aab729 https://www.encodeproject.org/files/ENCFF837KWS/@@download/ENCFF837KWS.bigBed hg19 released ENCFF846MNB bed narrowPeak peaks ENCSR322CFO ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZEB2-human ENCAB996GAH DNA False 2016-06-14 ENCODE 1, 2 ENCFF051LWI, ENCFF581ZJL, ENCFF666BDF, ENCFF875HFU 7230895 ENCODE Processing Pipeline 7f90af1afbe228c27a92cc79aea4dfc1 https://www.encodeproject.org/files/ENCFF846MNB/@@download/ENCFF846MNB.bed.gz hg19 released ENCFF407AOX bed narrowPeak optimal idr thresholded peaks ENCSR322CFO ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZEB2-human ENCAB996GAH DNA False 2016-06-14 ENCODE 1, 2 ENCFF001TDO, ENCFF295KFV, ENCFF597MUA, ENCFF846MNB 415569 ENCODE Processing Pipeline 66b1a2d68c92fbeb25faa3e5e7de339a https://www.encodeproject.org/files/ENCFF407AOX/@@download/ENCFF407AOX.bed.gz hg19 released ENCFF597MUA bed narrowPeak peaks ENCSR322CFO ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZEB2-human ENCAB996GAH DNA False 2016-06-14 ENCODE 1 ENCFF581ZJL, ENCFF875HFU 6760876 ENCODE Processing Pipeline 1ae57fda98146bd40cef8c7399d85572 https://www.encodeproject.org/files/ENCFF597MUA/@@download/ENCFF597MUA.bed.gz hg19 released ENCFF295KFV bed narrowPeak peaks ENCSR322CFO ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZEB2-human ENCAB996GAH DNA False 2016-06-14 ENCODE 2 ENCFF051LWI, ENCFF666BDF 6937560 ENCODE Processing Pipeline b92d3204db03532d0f6a6daf12d76ac8 https://www.encodeproject.org/files/ENCFF295KFV/@@download/ENCFF295KFV.bed.gz hg19 released ENCFF791BWM bigBed narrowPeak peaks ENCSR322CFO ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZEB2-human ENCAB996GAH DNA False 2016-06-14 ENCODE 1, 2 ENCFF846MNB 12965050 ENCODE Processing Pipeline ea668954c9023310785085631f8bdc9f https://www.encodeproject.org/files/ENCFF791BWM/@@download/ENCFF791BWM.bigBed hg19 released ENCFF552ISB bigBed narrowPeak conservative idr thresholded peaks ENCSR322CFO ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZEB2-human ENCAB996GAH DNA False 2016-06-14 ENCODE 1, 2 ENCFF568FLE 668264 ENCODE Processing Pipeline 1854a414fea2e91a752e3944d672d6f2 https://www.encodeproject.org/files/ENCFF552ISB/@@download/ENCFF552ISB.bigBed hg19 released ENCFF568FLE bed narrowPeak conservative idr thresholded peaks ENCSR322CFO ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZEB2-human ENCAB996GAH DNA False 2016-06-14 ENCODE 1, 2 ENCFF001TDO, ENCFF295KFV, ENCFF597MUA, ENCFF846MNB 305483 ENCODE Processing Pipeline 0673b3135cd30ac0509e0fc4ec01edb6 https://www.encodeproject.org/files/ENCFF568FLE/@@download/ENCFF568FLE.bed.gz hg19 released ENCFF000YKH bam alignments ENCSR000EZU ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 1 ENCFF000YPS 581692205 Sherman Weissman, Yale 672b858244d7c80d101c12ad411ff40f https://www.encodeproject.org/files/ENCFF000YKH/@@download/ENCFF000YKH.bam hg19 archived mixed read lengths, borderline replicate concordance, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF000YKI bam alignments ENCSR000EZU ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 2 ENCFF000YPT 873223319 Sherman Weissman, Yale 1d588412402f5fed4d7ef258e4f437d7 https://www.encodeproject.org/files/ENCFF000YKI/@@download/ENCFF000YKI.bam hg19 archived mixed read lengths, borderline replicate concordance, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF000YKJ bigBed narrowPeak peaks ENCSR000EZU ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE ENCFF001VMT 369325 Sherman Weissman, Yale 6db8e359875e0eb547a3a7722647d60b https://www.encodeproject.org/files/ENCFF000YKJ/@@download/ENCFF000YKJ.bigBed hg19 archived mixed read lengths, borderline replicate concordance, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF000YKK bigWig signal ENCSR000EZU ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 374686213 Sherman Weissman, Yale c60ca493fc0f8f6182119845086aadc7 https://www.encodeproject.org/files/ENCFF000YKK/@@download/ENCFF000YKK.bigWig hg19 archived mixed read lengths, borderline replicate concordance, control low read depth biological replicates with identical biosample, missing derived_from insufficient read length, insufficient read depth ENCFF000YPS fastq reads ENCSR000EZU ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 1 1 27 single-ended 426417173 Sherman Weissman, Yale e51c38d2ec1f980aa13296bca4f611da https://www.encodeproject.org/files/ENCFF000YPS/@@download/ENCFF000YPS.fastq.gz Illumina Genome Analyzer /files/ENCFF000YPZ/ released mixed read lengths, borderline replicate concordance, control low read depth, inconsistent control read length biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF000YPT fastq reads ENCSR000EZU ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 2 1 34 single-ended 711311023 Sherman Weissman, Yale 0b8b3540940dc2b044c1bf050bbb8dfa https://www.encodeproject.org/files/ENCFF000YPT/@@download/ENCFF000YPT.fastq.gz Illumina Genome Analyzer /files/ENCFF000YPZ/ released mixed read lengths, borderline replicate concordance, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF001VMT bed narrowPeak peaks ENCSR000EZU ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 158167 Sherman Weissman, Yale 1559f0c4b290124d18d21caebe70a85e https://www.encodeproject.org/files/ENCFF001VMT/@@download/ENCFF001VMT.bed.gz hg19 archived mixed read lengths, borderline replicate concordance, control low read depth biological replicates with identical biosample, missing derived_from insufficient read length, insufficient read depth ENCFF002CWG bed narrowPeak optimal idr thresholded peaks ENCSR000EZU ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 401062 ENCODE Consortium Analysis Working Group d5ec7ee4fc4ed19db3b6d72ce1341cdd https://www.encodeproject.org/files/ENCFF002CWG/@@download/ENCFF002CWG.bed.gz hg19 archived mixed read lengths, borderline replicate concordance, control low read depth biological replicates with identical biosample, missing derived_from insufficient read length, insufficient read depth ENCFF718SBI bigBed narrowPeak optimal idr thresholded peaks ENCSR000EZU ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE ENCFF002CWG 934894 ENCODE Consortium 7dbcb2d7156cbcbf9ff8b4549dec11ed https://www.encodeproject.org/files/ENCFF718SBI/@@download/ENCFF718SBI.bigBed hg19 archived mixed read lengths, borderline replicate concordance, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF034KWU bam unfiltered alignments ENCSR000EZU ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 1 27 ENCFF000YPS, ENCFF807MUK 582332219 ENCODE Processing Pipeline df1f7fef366d97485624fe21a89e615b https://www.encodeproject.org/files/ENCFF034KWU/@@download/ENCFF034KWU.bam hg19 released mixed read lengths, borderline replicate concordance, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF014DRH bam alignments ENCSR000EZU ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 1 27 ENCFF000YPS, ENCFF643CGH 261569545 ENCODE Processing Pipeline f9a0837fb102c412b4b28255903b43b5 https://www.encodeproject.org/files/ENCFF014DRH/@@download/ENCFF014DRH.bam GRCh38 released mixed read lengths, borderline replicate concordance, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF786FUF bam alignments ENCSR000EZU ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 1 27 ENCFF000YPS, ENCFF807MUK 262031142 ENCODE Processing Pipeline c0a28408e16a7e8d6d0db1a8e2339f5f https://www.encodeproject.org/files/ENCFF786FUF/@@download/ENCFF786FUF.bam hg19 released mixed read lengths, borderline replicate concordance, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF498NBR bam unfiltered alignments ENCSR000EZU ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 1 27 ENCFF000YPS, ENCFF643CGH 584175057 ENCODE Processing Pipeline 67de591d5b800af2cbc0d84b7a1bd0db https://www.encodeproject.org/files/ENCFF498NBR/@@download/ENCFF498NBR.bam GRCh38 released mixed read lengths, borderline replicate concordance, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF649RGM bam unfiltered alignments ENCSR000EZU ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 2 27 ENCFF000YPT, ENCFF807MUK 793540336 ENCODE Processing Pipeline 63d3c96b008c3e68efd5419d6918ddf8 https://www.encodeproject.org/files/ENCFF649RGM/@@download/ENCFF649RGM.bam hg19 released mixed read lengths, borderline replicate concordance, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF856BHN bam alignments ENCSR000EZU ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 2 27 ENCFF000YPT, ENCFF807MUK 367573338 ENCODE Processing Pipeline c0e6b0df5474d54d3814081a4fdee07e https://www.encodeproject.org/files/ENCFF856BHN/@@download/ENCFF856BHN.bam hg19 released mixed read lengths, borderline replicate concordance, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF880AXG bam unfiltered alignments ENCSR000EZU ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 2 27 ENCFF000YPT, ENCFF643CGH 795684688 ENCODE Processing Pipeline 6d07edf8c1de56fbed14c9127a49810b https://www.encodeproject.org/files/ENCFF880AXG/@@download/ENCFF880AXG.bam GRCh38 released mixed read lengths, borderline replicate concordance, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF553WMU bam alignments ENCSR000EZU ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 2 27 ENCFF000YPT, ENCFF643CGH 367153153 ENCODE Processing Pipeline 159903c9e945ff33958119dae7c7c826 https://www.encodeproject.org/files/ENCFF553WMU/@@download/ENCFF553WMU.bam GRCh38 released mixed read lengths, borderline replicate concordance, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF815LMX bigWig signal p-value ENCSR000EZU ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 1 ENCFF331ARQ, ENCFF786FUF 246184772 ENCODE Processing Pipeline 6301708bfe66fca50fba5c7bb7ba4774 https://www.encodeproject.org/files/ENCFF815LMX/@@download/ENCFF815LMX.bigWig hg19 released mixed read lengths, borderline replicate concordance, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF898DAB bigWig signal p-value ENCSR000EZU ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF014DRH, ENCFF482LDC, ENCFF553WMU 282108429 ENCODE Processing Pipeline 116dc63a7eb374b0c3fd5a85a524c7f5 https://www.encodeproject.org/files/ENCFF898DAB/@@download/ENCFF898DAB.bigWig GRCh38 released mixed read lengths, borderline replicate concordance, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF348SQZ bigWig signal p-value ENCSR000EZU ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 1 ENCFF014DRH, ENCFF482LDC 212943630 ENCODE Processing Pipeline fcb516e66655305952cd07592f898c01 https://www.encodeproject.org/files/ENCFF348SQZ/@@download/ENCFF348SQZ.bigWig GRCh38 released mixed read lengths, borderline replicate concordance, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF276XVE bigWig signal p-value ENCSR000EZU ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 2 ENCFF482LDC, ENCFF553WMU 261446550 ENCODE Processing Pipeline a3f58779369c208b930258f4ab94913d https://www.encodeproject.org/files/ENCFF276XVE/@@download/ENCFF276XVE.bigWig GRCh38 released mixed read lengths, borderline replicate concordance, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF319GVK bigWig fold change over control ENCSR000EZU ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 1 ENCFF014DRH, ENCFF482LDC 120385890 ENCODE Processing Pipeline 4d1ea036629b3b400ab4fa32696552d2 https://www.encodeproject.org/files/ENCFF319GVK/@@download/ENCFF319GVK.bigWig GRCh38 released mixed read lengths, borderline replicate concordance, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF728VLI bed narrowPeak peaks ENCSR000EZU ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 1 ENCFF014DRH, ENCFF482LDC 2632162 ENCODE Processing Pipeline ba407bb759b9d6cd787864ba08319b8b https://www.encodeproject.org/files/ENCFF728VLI/@@download/ENCFF728VLI.bed.gz GRCh38 released mixed read lengths, borderline replicate concordance, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF677RZA bed narrowPeak peaks ENCSR000EZU ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF014DRH, ENCFF482LDC, ENCFF553WMU 5035983 ENCODE Processing Pipeline aa47c7e820a787c18a61ba841aa9466b https://www.encodeproject.org/files/ENCFF677RZA/@@download/ENCFF677RZA.bed.gz GRCh38 released mixed read lengths, borderline replicate concordance, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF330FNH bigWig signal p-value ENCSR000EZU ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 2 ENCFF331ARQ, ENCFF856BHN 224816887 ENCODE Processing Pipeline d61b74379566dbacddaff2ee6d8e0665 https://www.encodeproject.org/files/ENCFF330FNH/@@download/ENCFF330FNH.bigWig hg19 released mixed read lengths, borderline replicate concordance, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF542EHG bigWig fold change over control ENCSR000EZU ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 1 ENCFF331ARQ, ENCFF786FUF 122445808 ENCODE Processing Pipeline a0130c36a26b8a44e7bc2551e17fc51a https://www.encodeproject.org/files/ENCFF542EHG/@@download/ENCFF542EHG.bigWig hg19 released mixed read lengths, borderline replicate concordance, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF576GQM bigWig fold change over control ENCSR000EZU ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF014DRH, ENCFF482LDC, ENCFF553WMU 254446288 ENCODE Processing Pipeline b1f4cbc6d50f2f60812a1a61a0e7607d https://www.encodeproject.org/files/ENCFF576GQM/@@download/ENCFF576GQM.bigWig GRCh38 released mixed read lengths, borderline replicate concordance, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF734MOZ bigWig fold change over control ENCSR000EZU ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 2 ENCFF482LDC, ENCFF553WMU 163920396 ENCODE Processing Pipeline 0b70248ef3aa63bb60bdf4b9d934cad8 https://www.encodeproject.org/files/ENCFF734MOZ/@@download/ENCFF734MOZ.bigWig GRCh38 released mixed read lengths, borderline replicate concordance, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF688LLV bigWig signal p-value ENCSR000EZU ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF331ARQ, ENCFF786FUF, ENCFF856BHN 285610788 ENCODE Processing Pipeline 1df1525f59896e3c3d4102d44b49cb95 https://www.encodeproject.org/files/ENCFF688LLV/@@download/ENCFF688LLV.bigWig hg19 released mixed read lengths, borderline replicate concordance, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF711KUA bigWig fold change over control ENCSR000EZU ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 2 ENCFF331ARQ, ENCFF856BHN 163827736 ENCODE Processing Pipeline 94a783ccd1e042acd1e026f8859fa0b8 https://www.encodeproject.org/files/ENCFF711KUA/@@download/ENCFF711KUA.bigWig hg19 released mixed read lengths, borderline replicate concordance, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF637LLS bigBed narrowPeak peaks ENCSR000EZU ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 1 ENCFF728VLI 6105821 ENCODE Processing Pipeline bdd222af25ac2ebadb52f98103d84e11 https://www.encodeproject.org/files/ENCFF637LLS/@@download/ENCFF637LLS.bigBed GRCh38 released mixed read lengths, borderline replicate concordance, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF122BCQ bed narrowPeak peaks ENCSR000EZU ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 2 ENCFF482LDC, ENCFF553WMU 4626333 ENCODE Processing Pipeline 3d2c6ee0cf440e413e1a219592af0760 https://www.encodeproject.org/files/ENCFF122BCQ/@@download/ENCFF122BCQ.bed.gz GRCh38 released mixed read lengths, borderline replicate concordance, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF871DRY bigBed narrowPeak peaks ENCSR000EZU ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 2 ENCFF122BCQ 9649696 ENCODE Processing Pipeline 632a80c2c1a2b38993fc0d414003dd15 https://www.encodeproject.org/files/ENCFF871DRY/@@download/ENCFF871DRY.bigBed GRCh38 released mixed read lengths, borderline replicate concordance, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF795LDM bigBed narrowPeak peaks ENCSR000EZU ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF677RZA 12647331 ENCODE Processing Pipeline bd4a1adfd5cd53356501bcbfdbd48395 https://www.encodeproject.org/files/ENCFF795LDM/@@download/ENCFF795LDM.bigBed GRCh38 released mixed read lengths, borderline replicate concordance, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF723QGS bed narrowPeak conservative idr thresholded peaks ENCSR000EZU ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF122BCQ, ENCFF419RSJ, ENCFF677RZA, ENCFF728VLI 221919 ENCODE Processing Pipeline 9ca035477c6ae95fe30eada01d7ffa43 https://www.encodeproject.org/files/ENCFF723QGS/@@download/ENCFF723QGS.bed.gz GRCh38 released mixed read lengths, borderline replicate concordance, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF162CMX bed narrowPeak peaks ENCSR000EZU ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 1 ENCFF331ARQ, ENCFF786FUF 2638510 ENCODE Processing Pipeline f5b08c1bb672d0c431f41530b2bea7fe https://www.encodeproject.org/files/ENCFF162CMX/@@download/ENCFF162CMX.bed.gz hg19 released mixed read lengths, borderline replicate concordance, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF112BJR bigWig fold change over control ENCSR000EZU ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF331ARQ, ENCFF786FUF, ENCFF856BHN 255331828 ENCODE Processing Pipeline a9b665f8f411d3624bae4044f80f504c https://www.encodeproject.org/files/ENCFF112BJR/@@download/ENCFF112BJR.bigWig hg19 released mixed read lengths, borderline replicate concordance, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF634ZEE bigBed narrowPeak conservative idr thresholded peaks ENCSR000EZU ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF723QGS 422646 ENCODE Processing Pipeline 00b362ee635f98a977162059a8a94e2d https://www.encodeproject.org/files/ENCFF634ZEE/@@download/ENCFF634ZEE.bigBed GRCh38 released mixed read lengths, borderline replicate concordance, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF527EGF bed narrowPeak optimal idr thresholded peaks ENCSR000EZU ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF122BCQ, ENCFF419RSJ, ENCFF677RZA, ENCFF728VLI 371250 ENCODE Processing Pipeline 3a8523899d1f1064e0fc3ca82eed8c9b https://www.encodeproject.org/files/ENCFF527EGF/@@download/ENCFF527EGF.bed.gz GRCh38 released mixed read lengths, borderline replicate concordance, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF360BLD bigBed narrowPeak optimal idr thresholded peaks ENCSR000EZU ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF527EGF 753384 ENCODE Processing Pipeline e6b7caaf2ebaa50a5ec2758a9dbda24b https://www.encodeproject.org/files/ENCFF360BLD/@@download/ENCFF360BLD.bigBed GRCh38 released mixed read lengths, borderline replicate concordance, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF934ENB bed narrowPeak peaks ENCSR000EZU ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF331ARQ, ENCFF786FUF, ENCFF856BHN 5035619 ENCODE Processing Pipeline 71fc661f1eec0e96a9d500014c38457b https://www.encodeproject.org/files/ENCFF934ENB/@@download/ENCFF934ENB.bed.gz hg19 released mixed read lengths, borderline replicate concordance, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF696DPC bigBed narrowPeak peaks ENCSR000EZU ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 1 ENCFF162CMX 6115945 ENCODE Processing Pipeline e3ff084a762e922e4dadfb5fd76fd725 https://www.encodeproject.org/files/ENCFF696DPC/@@download/ENCFF696DPC.bigBed hg19 released mixed read lengths, borderline replicate concordance, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF987HSI bed narrowPeak peaks ENCSR000EZU ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 2 ENCFF331ARQ, ENCFF856BHN 4571912 ENCODE Processing Pipeline 4d3e144ab7b5f8f68869361d01a844a0 https://www.encodeproject.org/files/ENCFF987HSI/@@download/ENCFF987HSI.bed.gz hg19 released mixed read lengths, borderline replicate concordance, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF700KHO bigBed narrowPeak peaks ENCSR000EZU ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF934ENB 12648302 ENCODE Processing Pipeline 0970512eaef9679f0d737c68abee399a https://www.encodeproject.org/files/ENCFF700KHO/@@download/ENCFF700KHO.bigBed hg19 released mixed read lengths, borderline replicate concordance, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF217MOG bigBed narrowPeak peaks ENCSR000EZU ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 2 ENCFF987HSI 9585884 ENCODE Processing Pipeline e8387fa444c1eb08c820fb68a7e4a795 https://www.encodeproject.org/files/ENCFF217MOG/@@download/ENCFF217MOG.bigBed hg19 released mixed read lengths, borderline replicate concordance, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF279AQA bigBed narrowPeak conservative idr thresholded peaks ENCSR000EZU ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF390IMT 422391 ENCODE Processing Pipeline 19e1bfda8f23c4b39496137a01b8c7bf https://www.encodeproject.org/files/ENCFF279AQA/@@download/ENCFF279AQA.bigBed hg19 released mixed read lengths, borderline replicate concordance, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF390IMT bed narrowPeak conservative idr thresholded peaks ENCSR000EZU ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF001TDO, ENCFF162CMX, ENCFF934ENB, ENCFF987HSI 221318 ENCODE Processing Pipeline da826e78c48b0e1e1aa8ae4611dab38f https://www.encodeproject.org/files/ENCFF390IMT/@@download/ENCFF390IMT.bed.gz hg19 released mixed read lengths, borderline replicate concordance, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF099SDW bed narrowPeak optimal idr thresholded peaks ENCSR000EZU ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF001TDO, ENCFF162CMX, ENCFF934ENB, ENCFF987HSI 365512 ENCODE Processing Pipeline a5ea998d3571ba34457f33fe6da76db2 https://www.encodeproject.org/files/ENCFF099SDW/@@download/ENCFF099SDW.bed.gz hg19 released mixed read lengths, borderline replicate concordance, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF267ECZ bigBed narrowPeak optimal idr thresholded peaks ENCSR000EZU ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour MYC-human ENCAB000AET DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF099SDW 745024 ENCODE Processing Pipeline 7de51ebab8ed9fa4f7f433458d33eed2 https://www.encodeproject.org/files/ENCFF267ECZ/@@download/ENCFF267ECZ.bigBed hg19 released mixed read lengths, borderline replicate concordance, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF000QJD bam alignments ENCSR000BKT ChIP-seq EFO:0002067 K562 cell line Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 1 ENCFF000QJR 724187758 Richard Myers, HAIB 74669be6c21ceba21af59d55793521d2 https://www.encodeproject.org/files/ENCFF000QJD/@@download/ENCFF000QJD.bam hg19 archived borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, poor library complexity, severe bottlenecking extremely low read depth ENCFF000QJE bigBed broadPeak peaks ENCSR000BKT ChIP-seq EFO:0002067 K562 cell line Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 1 1 ENCFF001ULX 674780 Richard Myers, HAIB 6c3b4bc9ae7790f6bb17f0110edee937 https://www.encodeproject.org/files/ENCFF000QJE/@@download/ENCFF000QJE.bigBed hg19 archived borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, poor library complexity, severe bottlenecking extremely low read depth ENCFF000QJF bigBed broadPeak peaks ENCSR000BKT ChIP-seq EFO:0002067 K562 cell line Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 2 1 ENCFF001ULY 298311 Richard Myers, HAIB 66b669ebcf3d3cb04b9f2e3fedcf6239 https://www.encodeproject.org/files/ENCFF000QJF/@@download/ENCFF000QJF.bigBed hg19 archived borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, poor library complexity, severe bottlenecking extremely low read depth ENCFF000QJG bam alignments ENCSR000BKT ChIP-seq EFO:0002067 K562 cell line Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 2 ENCFF000QJP 371386073 Richard Myers, HAIB e85ef479abaaf0b72ad2c92585475f28 https://www.encodeproject.org/files/ENCFF000QJG/@@download/ENCFF000QJG.bam hg19 archived borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, poor library complexity, severe bottlenecking extremely low read depth ENCFF000QJI bigWig raw signal ENCSR000BKT ChIP-seq EFO:0002067 K562 cell line Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 1 1 24475555 Richard Myers, HAIB dac77fee84466087af8a45255cc16019 https://www.encodeproject.org/files/ENCFF000QJI/@@download/ENCFF000QJI.bigWig hg19 archived borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample, missing derived_from control insufficient read depth, poor library complexity, severe bottlenecking extremely low read depth ENCFF000QJJ bigWig raw signal ENCSR000BKT ChIP-seq EFO:0002067 K562 cell line Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 2 1 12319574 Richard Myers, HAIB bfef7f8ecf47825895bd756fc282dfaf https://www.encodeproject.org/files/ENCFF000QJJ/@@download/ENCFF000QJJ.bigWig hg19 archived borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample, missing derived_from control insufficient read depth, poor library complexity, severe bottlenecking extremely low read depth ENCFF000QJP fastq reads ENCSR000BKT ChIP-seq EFO:0002067 K562 cell line Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 2 1 36 single-ended 369345973 Richard Myers, HAIB 27bdde22561f8f839cb9bdfc64f77735 https://www.encodeproject.org/files/ENCFF000QJP/@@download/ENCFF000QJP.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000QEX/ released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, poor library complexity, severe bottlenecking extremely low read depth ENCFF000QJR fastq reads ENCSR000BKT ChIP-seq EFO:0002067 K562 cell line Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 1 1 36 single-ended 685037617 Richard Myers, HAIB 6ccc2c8fa001bf9a6f5aeed3f1e2f4ab https://www.encodeproject.org/files/ENCFF000QJR/@@download/ENCFF000QJR.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000QEX/ released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, poor library complexity, severe bottlenecking extremely low read depth ENCFF001ULX bed broadPeak peaks ENCSR000BKT ChIP-seq EFO:0002067 K562 cell line Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 1 1 385227 Richard Myers, HAIB 1bf5eda232c5803038281953c1f5f815 https://www.encodeproject.org/files/ENCFF001ULX/@@download/ENCFF001ULX.bed.gz hg19 archived borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample, missing derived_from control insufficient read depth, poor library complexity, severe bottlenecking extremely low read depth ENCFF001ULY bed broadPeak peaks ENCSR000BKT ChIP-seq EFO:0002067 K562 cell line Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 2 1 182030 Richard Myers, HAIB 28728a1c6d56dc0f6aed5a1a8a3fd40e https://www.encodeproject.org/files/ENCFF001ULY/@@download/ENCFF001ULY.bed.gz hg19 archived borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample, missing derived_from control insufficient read depth, poor library complexity, severe bottlenecking extremely low read depth ENCFF002CMV bed narrowPeak optimal idr thresholded peaks ENCSR000BKT ChIP-seq EFO:0002067 K562 cell line Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 364508 ENCODE Consortium Analysis Working Group ed11b14aaf5f989b08e1da0a481d73cf https://www.encodeproject.org/files/ENCFF002CMV/@@download/ENCFF002CMV.bed.gz hg19 archived borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample, missing derived_from control insufficient read depth, poor library complexity, severe bottlenecking extremely low read depth ENCFF666MMS bigBed narrowPeak optimal idr thresholded peaks ENCSR000BKT ChIP-seq EFO:0002067 K562 cell line Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE ENCFF002CMV 717859 ENCODE Consortium 3585b6877e15603117021503258aab50 https://www.encodeproject.org/files/ENCFF666MMS/@@download/ENCFF666MMS.bigBed hg19 archived borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, poor library complexity, severe bottlenecking extremely low read depth ENCFF070DTB bam unfiltered alignments ENCSR000BKT ChIP-seq EFO:0002067 K562 cell line Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000QJP, ENCFF643CGH 442553986 ENCODE Processing Pipeline a92ddfef5b1d8576655fc9dbb711f7c9 https://www.encodeproject.org/files/ENCFF070DTB/@@download/ENCFF070DTB.bam GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, poor library complexity, severe bottlenecking extremely low read depth ENCFF794ABP bam alignments ENCSR000BKT ChIP-seq EFO:0002067 K562 cell line Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000QJP, ENCFF643CGH 156295938 ENCODE Processing Pipeline 2fbab4694606a2a63232600c8c48b061 https://www.encodeproject.org/files/ENCFF794ABP/@@download/ENCFF794ABP.bam GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, poor library complexity, severe bottlenecking extremely low read depth ENCFF523RSS bam unfiltered alignments ENCSR000BKT ChIP-seq EFO:0002067 K562 cell line Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000QJR, ENCFF643CGH 851221925 ENCODE Processing Pipeline bfb0152b5840ea90c2e9a014cb51fae4 https://www.encodeproject.org/files/ENCFF523RSS/@@download/ENCFF523RSS.bam GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, poor library complexity, severe bottlenecking extremely low read depth ENCFF587WWS bam alignments ENCSR000BKT ChIP-seq EFO:0002067 K562 cell line Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000QJR, ENCFF643CGH 390081753 ENCODE Processing Pipeline bd69f335271c3f114e0efc2635c48416 https://www.encodeproject.org/files/ENCFF587WWS/@@download/ENCFF587WWS.bam GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, poor library complexity, severe bottlenecking extremely low read depth ENCFF827PYV bam unfiltered alignments ENCSR000BKT ChIP-seq EFO:0002067 K562 cell line Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000QJP, ENCFF807MUK 441566854 ENCODE Processing Pipeline cb3e9d8e3846bbe4b059f50f3a74f4a2 https://www.encodeproject.org/files/ENCFF827PYV/@@download/ENCFF827PYV.bam hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, poor library complexity, severe bottlenecking extremely low read depth ENCFF318WJA bam alignments ENCSR000BKT ChIP-seq EFO:0002067 K562 cell line Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000QJP, ENCFF807MUK 156405298 ENCODE Processing Pipeline bd64912922ada53dacb8b96e1fa0c470 https://www.encodeproject.org/files/ENCFF318WJA/@@download/ENCFF318WJA.bam hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, poor library complexity, severe bottlenecking extremely low read depth ENCFF396PZE bam unfiltered alignments ENCSR000BKT ChIP-seq EFO:0002067 K562 cell line Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000QJR, ENCFF807MUK 849833942 ENCODE Processing Pipeline fab48bc6b23b6a2055c69ab2fd2ff77d https://www.encodeproject.org/files/ENCFF396PZE/@@download/ENCFF396PZE.bam hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, poor library complexity, severe bottlenecking extremely low read depth ENCFF528NQV bam alignments ENCSR000BKT ChIP-seq EFO:0002067 K562 cell line Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000QJR, ENCFF807MUK 390305962 ENCODE Processing Pipeline bbc71c4b5a16af131fb5d2724205b0a6 https://www.encodeproject.org/files/ENCFF528NQV/@@download/ENCFF528NQV.bam hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, poor library complexity, severe bottlenecking extremely low read depth ENCFF906YUY bigWig signal p-value ENCSR000BKT ChIP-seq EFO:0002067 K562 cell line Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 2 ENCFF772PJM, ENCFF794ABP 185036989 ENCODE Processing Pipeline 5f75c67df481a47cf2bd9aee1fdd9f78 https://www.encodeproject.org/files/ENCFF906YUY/@@download/ENCFF906YUY.bigWig GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, poor library complexity, severe bottlenecking extremely low read depth ENCFF210RNN bigWig signal p-value ENCSR000BKT ChIP-seq EFO:0002067 K562 cell line Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF587WWS, ENCFF772PJM, ENCFF794ABP 212691572 ENCODE Processing Pipeline dc6a93cd72777988b584a2e20d37647c https://www.encodeproject.org/files/ENCFF210RNN/@@download/ENCFF210RNN.bigWig GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, poor library complexity, severe bottlenecking extremely low read depth ENCFF234YTJ bigWig fold change over control ENCSR000BKT ChIP-seq EFO:0002067 K562 cell line Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 2 ENCFF772PJM, ENCFF794ABP 81984391 ENCODE Processing Pipeline 723dcccf1b989a359bcf9cb48ff7e182 https://www.encodeproject.org/files/ENCFF234YTJ/@@download/ENCFF234YTJ.bigWig GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, poor library complexity, severe bottlenecking extremely low read depth ENCFF447MDX bigBed narrowPeak conservative idr thresholded peaks ENCSR000BKT ChIP-seq EFO:0002067 K562 cell line Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF409EYL 388533 ENCODE Processing Pipeline fe97e96495cf371e8701409d7a206793 https://www.encodeproject.org/files/ENCFF447MDX/@@download/ENCFF447MDX.bigBed GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, poor library complexity, severe bottlenecking extremely low read depth ENCFF208OMR bigWig signal p-value ENCSR000BKT ChIP-seq EFO:0002067 K562 cell line Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 1 ENCFF587WWS, ENCFF772PJM 206516586 ENCODE Processing Pipeline 3af4a8a1ff9d23f1066fa85aa238f77f https://www.encodeproject.org/files/ENCFF208OMR/@@download/ENCFF208OMR.bigWig GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, poor library complexity, severe bottlenecking extremely low read depth ENCFF419ANM bed narrowPeak peaks ENCSR000BKT ChIP-seq EFO:0002067 K562 cell line Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 1 ENCFF587WWS, ENCFF772PJM 4055553 ENCODE Processing Pipeline bb48a448fb4f0cd6efb94258dc838c9e https://www.encodeproject.org/files/ENCFF419ANM/@@download/ENCFF419ANM.bed.gz GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, poor library complexity, severe bottlenecking extremely low read depth ENCFF225JGM bed narrowPeak peaks ENCSR000BKT ChIP-seq EFO:0002067 K562 cell line Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF587WWS, ENCFF772PJM, ENCFF794ABP 2618829 ENCODE Processing Pipeline 5bf1a09c6f0de305f7f65098c9df1f4d https://www.encodeproject.org/files/ENCFF225JGM/@@download/ENCFF225JGM.bed.gz GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, poor library complexity, severe bottlenecking extremely low read depth ENCFF375XWR bigWig fold change over control ENCSR000BKT ChIP-seq EFO:0002067 K562 cell line Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF587WWS, ENCFF772PJM, ENCFF794ABP 232271019 ENCODE Processing Pipeline 95edbd3a5c311cae8cf4dcf37df1a40c https://www.encodeproject.org/files/ENCFF375XWR/@@download/ENCFF375XWR.bigWig GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, poor library complexity, severe bottlenecking extremely low read depth ENCFF774AJU bigBed narrowPeak peaks ENCSR000BKT ChIP-seq EFO:0002067 K562 cell line Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF225JGM 6003593 ENCODE Processing Pipeline 60eea8902b8616a173407ee13ba36cb3 https://www.encodeproject.org/files/ENCFF774AJU/@@download/ENCFF774AJU.bigBed GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, poor library complexity, severe bottlenecking extremely low read depth ENCFF076UBM bigBed narrowPeak optimal idr thresholded peaks ENCSR000BKT ChIP-seq EFO:0002067 K562 cell line Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF717KGR 652292 ENCODE Processing Pipeline 07ee5a73cb87af7fc3f97fbf45441e2a https://www.encodeproject.org/files/ENCFF076UBM/@@download/ENCFF076UBM.bigBed GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, poor library complexity, severe bottlenecking extremely low read depth ENCFF910PEX bigWig fold change over control ENCSR000BKT ChIP-seq EFO:0002067 K562 cell line Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 1 ENCFF587WWS, ENCFF772PJM 168312990 ENCODE Processing Pipeline f9c9fc6f7bd966f2b1bbbceb8f740455 https://www.encodeproject.org/files/ENCFF910PEX/@@download/ENCFF910PEX.bigWig GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, poor library complexity, severe bottlenecking extremely low read depth ENCFF857POG bed narrowPeak peaks ENCSR000BKT ChIP-seq EFO:0002067 K562 cell line Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 2 ENCFF772PJM, ENCFF794ABP 1523381 ENCODE Processing Pipeline 44b833e6e54dd885d4d2e1197854c926 https://www.encodeproject.org/files/ENCFF857POG/@@download/ENCFF857POG.bed.gz GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, poor library complexity, severe bottlenecking extremely low read depth ENCFF409EYL bed narrowPeak conservative idr thresholded peaks ENCSR000BKT ChIP-seq EFO:0002067 K562 cell line Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF225JGM, ENCFF419ANM, ENCFF419RSJ, ENCFF857POG 227872 ENCODE Processing Pipeline 93784a6db50bee1592770335f530509e https://www.encodeproject.org/files/ENCFF409EYL/@@download/ENCFF409EYL.bed.gz GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, poor library complexity, severe bottlenecking extremely low read depth ENCFF971IKF bigBed narrowPeak peaks ENCSR000BKT ChIP-seq EFO:0002067 K562 cell line Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 1 ENCFF419ANM 9694081 ENCODE Processing Pipeline 6258b7f873214ac02d22ea62a34f8a0b https://www.encodeproject.org/files/ENCFF971IKF/@@download/ENCFF971IKF.bigBed GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, poor library complexity, severe bottlenecking extremely low read depth ENCFF613TYX bigBed narrowPeak peaks ENCSR000BKT ChIP-seq EFO:0002067 K562 cell line Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 2 ENCFF857POG 3192797 ENCODE Processing Pipeline 2f56b5d81cc2f380696ea32dd5bf8295 https://www.encodeproject.org/files/ENCFF613TYX/@@download/ENCFF613TYX.bigBed GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, poor library complexity, severe bottlenecking extremely low read depth ENCFF717KGR bed narrowPeak optimal idr thresholded peaks ENCSR000BKT ChIP-seq EFO:0002067 K562 cell line Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF225JGM, ENCFF419ANM, ENCFF419RSJ, ENCFF857POG 344249 ENCODE Processing Pipeline 265cbc2d514f989af73979fec5570bb3 https://www.encodeproject.org/files/ENCFF717KGR/@@download/ENCFF717KGR.bed.gz GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, poor library complexity, severe bottlenecking extremely low read depth ENCFF743JLH bigBed narrowPeak peaks ENCSR000BKT ChIP-seq EFO:0002067 K562 cell line Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF278MWT 6012600 ENCODE Processing Pipeline 405f1053bf09901dcf694d0dee8ef6ce https://www.encodeproject.org/files/ENCFF743JLH/@@download/ENCFF743JLH.bigBed hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, poor library complexity, severe bottlenecking extremely low read depth ENCFF607WTO bigWig fold change over control ENCSR000BKT ChIP-seq EFO:0002067 K562 cell line Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 1 ENCFF528NQV, ENCFF750MIM 168832089 ENCODE Processing Pipeline 760c9a6c2e3690d723dd39cb844a1918 https://www.encodeproject.org/files/ENCFF607WTO/@@download/ENCFF607WTO.bigWig hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, poor library complexity, severe bottlenecking extremely low read depth ENCFF278MWT bed narrowPeak peaks ENCSR000BKT ChIP-seq EFO:0002067 K562 cell line Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF318WJA, ENCFF528NQV, ENCFF750MIM 2624623 ENCODE Processing Pipeline 071924f44c9d6645241f8906cea6aa79 https://www.encodeproject.org/files/ENCFF278MWT/@@download/ENCFF278MWT.bed.gz hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, poor library complexity, severe bottlenecking extremely low read depth ENCFF931KGU bigBed narrowPeak conservative idr thresholded peaks ENCSR000BKT ChIP-seq EFO:0002067 K562 cell line Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF774EUE 388840 ENCODE Processing Pipeline 398658437a8d446bc8649a5d893de215 https://www.encodeproject.org/files/ENCFF931KGU/@@download/ENCFF931KGU.bigBed hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, poor library complexity, severe bottlenecking extremely low read depth ENCFF304OHJ bigWig signal p-value ENCSR000BKT ChIP-seq EFO:0002067 K562 cell line Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF318WJA, ENCFF528NQV, ENCFF750MIM 212783920 ENCODE Processing Pipeline e98a336074cf49a05b76f938f1697b7a https://www.encodeproject.org/files/ENCFF304OHJ/@@download/ENCFF304OHJ.bigWig hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, poor library complexity, severe bottlenecking extremely low read depth ENCFF738UPC bed narrowPeak peaks ENCSR000BKT ChIP-seq EFO:0002067 K562 cell line Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 1 ENCFF528NQV, ENCFF750MIM 4056488 ENCODE Processing Pipeline 78a14c1120d15e8f3b0da0e358904143 https://www.encodeproject.org/files/ENCFF738UPC/@@download/ENCFF738UPC.bed.gz hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, poor library complexity, severe bottlenecking extremely low read depth ENCFF459QHU bigBed narrowPeak optimal idr thresholded peaks ENCSR000BKT ChIP-seq EFO:0002067 K562 cell line Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF334FMW 651695 ENCODE Processing Pipeline ad7a15aedd7d7b46c1f8cf1f6c015f9f https://www.encodeproject.org/files/ENCFF459QHU/@@download/ENCFF459QHU.bigBed hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, poor library complexity, severe bottlenecking extremely low read depth ENCFF455JRF bigWig fold change over control ENCSR000BKT ChIP-seq EFO:0002067 K562 cell line Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF318WJA, ENCFF528NQV, ENCFF750MIM 230663812 ENCODE Processing Pipeline 24403d2519569161d687add81248377b https://www.encodeproject.org/files/ENCFF455JRF/@@download/ENCFF455JRF.bigWig hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, poor library complexity, severe bottlenecking extremely low read depth ENCFF774EUE bed narrowPeak conservative idr thresholded peaks ENCSR000BKT ChIP-seq EFO:0002067 K562 cell line Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF001TDO, ENCFF278MWT, ENCFF385JVK, ENCFF738UPC 228566 ENCODE Processing Pipeline 675c54383ff44c2863b42c0245f758f8 https://www.encodeproject.org/files/ENCFF774EUE/@@download/ENCFF774EUE.bed.gz hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, poor library complexity, severe bottlenecking extremely low read depth ENCFF258HVS bigWig signal p-value ENCSR000BKT ChIP-seq EFO:0002067 K562 cell line Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 1 ENCFF528NQV, ENCFF750MIM 206749267 ENCODE Processing Pipeline 9ea50961f10780da671de971e8b42851 https://www.encodeproject.org/files/ENCFF258HVS/@@download/ENCFF258HVS.bigWig hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, poor library complexity, severe bottlenecking extremely low read depth ENCFF913RHK bigWig signal p-value ENCSR000BKT ChIP-seq EFO:0002067 K562 cell line Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 2 ENCFF318WJA, ENCFF750MIM 158681823 ENCODE Processing Pipeline 92ee063cf64868d17a8723603f0fe8af https://www.encodeproject.org/files/ENCFF913RHK/@@download/ENCFF913RHK.bigWig hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, poor library complexity, severe bottlenecking extremely low read depth ENCFF385JVK bed narrowPeak peaks ENCSR000BKT ChIP-seq EFO:0002067 K562 cell line Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 2 ENCFF318WJA, ENCFF750MIM 1525708 ENCODE Processing Pipeline f93457e811729a1fdec4d62809e3091c https://www.encodeproject.org/files/ENCFF385JVK/@@download/ENCFF385JVK.bed.gz hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, poor library complexity, severe bottlenecking extremely low read depth ENCFF611KET bigBed narrowPeak peaks ENCSR000BKT ChIP-seq EFO:0002067 K562 cell line Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 1 ENCFF738UPC 9691697 ENCODE Processing Pipeline 4f151d73e8b8e9e8f7facee0ae0497f4 https://www.encodeproject.org/files/ENCFF611KET/@@download/ENCFF611KET.bigBed hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, poor library complexity, severe bottlenecking extremely low read depth ENCFF334FMW bed narrowPeak optimal idr thresholded peaks ENCSR000BKT ChIP-seq EFO:0002067 K562 cell line Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF001TDO, ENCFF278MWT, ENCFF385JVK, ENCFF738UPC 343702 ENCODE Processing Pipeline c8c6a2b189f45df818d83179943cc412 https://www.encodeproject.org/files/ENCFF334FMW/@@download/ENCFF334FMW.bed.gz hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, poor library complexity, severe bottlenecking extremely low read depth ENCFF865LXB bigWig fold change over control ENCSR000BKT ChIP-seq EFO:0002067 K562 cell line Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 2 ENCFF318WJA, ENCFF750MIM 81860279 ENCODE Processing Pipeline afa5280e35aa28c35faba53c8b1829a9 https://www.encodeproject.org/files/ENCFF865LXB/@@download/ENCFF865LXB.bigWig hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, poor library complexity, severe bottlenecking extremely low read depth ENCFF932MSQ bigBed narrowPeak peaks ENCSR000BKT ChIP-seq EFO:0002067 K562 cell line Homo sapiens USF1-human ENCAB000AMF DNA see document see document False 2011-07-18 ENCODE 2 ENCFF385JVK 3197706 ENCODE Processing Pipeline 50704a25c00738109b505645fa1025c1 https://www.encodeproject.org/files/ENCFF932MSQ/@@download/ENCFF932MSQ.bigBed hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, poor library complexity, severe bottlenecking extremely low read depth ENCFF000YJP bam alignments ENCSR000FAH ChIP-seq EFO:0002067 K562 cell line Homo sapiens JUN-human ENCAB000AER DNA see document see document False 2011-10-29 ENCODE 1 ENCFF000YKL 382820814 Sherman Weissman, Yale 14478d823fb0aa5ca708dcc0d31403da https://www.encodeproject.org/files/ENCFF000YJP/@@download/ENCFF000YJP.bam hg19 released biological replicates with identical biosample insufficient read length ENCFF000YJQ bam alignments ENCSR000FAH ChIP-seq EFO:0002067 K562 cell line Homo sapiens JUN-human ENCAB000AER DNA see document see document False 2011-10-29 ENCODE 2 ENCFF000YKM 341009148 Sherman Weissman, Yale 63ab7f517bf6817a12b43040f22339ff https://www.encodeproject.org/files/ENCFF000YJQ/@@download/ENCFF000YJQ.bam hg19 released biological replicates with identical biosample insufficient read length ENCFF000YJR bigBed narrowPeak peaks ENCSR000FAH ChIP-seq EFO:0002067 K562 cell line Homo sapiens JUN-human ENCAB000AER DNA see document see document False 2011-10-29 ENCODE ENCFF001VMP 403587 Sherman Weissman, Yale 7cf5c3d543e56e0dd47382b0e075af95 https://www.encodeproject.org/files/ENCFF000YJR/@@download/ENCFF000YJR.bigBed hg19 released biological replicates with identical biosample insufficient read length ENCFF000YJS bigWig signal ENCSR000FAH ChIP-seq EFO:0002067 K562 cell line Homo sapiens JUN-human ENCAB000AER DNA see document see document False 2011-10-29 ENCODE 330571171 Sherman Weissman, Yale 4f0b095b33642d8b36899c01af600784 https://www.encodeproject.org/files/ENCFF000YJS/@@download/ENCFF000YJS.bigWig hg19 released biological replicates with identical biosample, missing derived_from insufficient read length ENCFF000YKL fastq reads ENCSR000FAH ChIP-seq EFO:0002067 K562 cell line Homo sapiens JUN-human ENCAB000AER DNA see document see document False 2011-10-29 ENCODE 1 1 27 single-ended 308210329 Sherman Weissman, Yale a3a7b2296e7f8be7496fa5fbb49db9d7 https://www.encodeproject.org/files/ENCFF000YKL/@@download/ENCFF000YKL.fastq.gz Illumina Genome Analyzer released biological replicates with identical biosample insufficient read length, missing controlled_by ENCFF000YKM fastq reads ENCSR000FAH ChIP-seq EFO:0002067 K562 cell line Homo sapiens JUN-human ENCAB000AER DNA see document see document False 2011-10-29 ENCODE 2 1 27 single-ended 280654290 Sherman Weissman, Yale bd19566d51743e4fb662704d518ceba2 https://www.encodeproject.org/files/ENCFF000YKM/@@download/ENCFF000YKM.fastq.gz Illumina Genome Analyzer released biological replicates with identical biosample insufficient read length, missing controlled_by ENCFF001VMP bed narrowPeak peaks ENCSR000FAH ChIP-seq EFO:0002067 K562 cell line Homo sapiens JUN-human ENCAB000AER DNA see document see document False 2011-10-29 ENCODE 146616 Sherman Weissman, Yale 7ed01cd027c0414c49da3f4df1c41fe1 https://www.encodeproject.org/files/ENCFF001VMP/@@download/ENCFF001VMP.bed.gz hg19 released biological replicates with identical biosample, missing derived_from insufficient read length ENCFF002CWC bed narrowPeak optimal idr thresholded peaks ENCSR000FAH ChIP-seq EFO:0002067 K562 cell line Homo sapiens JUN-human ENCAB000AER DNA see document see document False 2011-10-29 ENCODE 192247 ENCODE Consortium Analysis Working Group abdba0bac5cb6444fefa32850edddc63 https://www.encodeproject.org/files/ENCFF002CWC/@@download/ENCFF002CWC.bed.gz hg19 released biological replicates with identical biosample, missing derived_from insufficient read length ENCFF508TQH bigBed narrowPeak optimal idr thresholded peaks ENCSR000FAH ChIP-seq EFO:0002067 K562 cell line Homo sapiens JUN-human ENCAB000AER DNA see document see document False 2011-10-29 ENCODE ENCFF002CWC 424510 ENCODE Consortium cebda9e132f4bec058903cf270e52d0d https://www.encodeproject.org/files/ENCFF508TQH/@@download/ENCFF508TQH.bigBed hg19 released biological replicates with identical biosample insufficient read length ENCFF465UXO bam unfiltered alignments ENCSR740NPG ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-BACH1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 50 ENCFF168MKQ, ENCFF807MUK, ENCFF979UQU 1910002867 ENCODE Processing Pipeline a6263e563094e751198a24abe39e5801 https://www.encodeproject.org/files/ENCFF465UXO/@@download/ENCFF465UXO.bam hg19 released missing genetic modification characterization missing control alignments ENCFF251XRL bam unfiltered alignments ENCSR740NPG ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-BACH1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 50 ENCFF501KRI, ENCFF807MUK, ENCFF858NEZ 1599894386 ENCODE Processing Pipeline 6650e19086466e2e87ca97153d4c9e49 https://www.encodeproject.org/files/ENCFF251XRL/@@download/ENCFF251XRL.bam hg19 released missing genetic modification characterization missing control alignments ENCFF979UQU fastq reads ENCSR740NPG ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-BACH1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 1 50 single-ended 935292585 Kevin White, UChicago be16f7471f14e8cb5786190a86c8b24d SRA:SRR6214115 https://www.encodeproject.org/files/ENCFF979UQU/@@download/ENCFF979UQU.fastq.gz Illumina HiSeq 2500 /files/ENCFF011LJK/, /files/ENCFF649MVC/ released missing genetic modification characterization missing control alignments ENCFF858NEZ fastq reads ENCSR740NPG ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-BACH1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 1 50 single-ended 608719259 Kevin White, UChicago 3137ed127d35502d3aaab90defbcf3db SRA:SRR6214117 https://www.encodeproject.org/files/ENCFF858NEZ/@@download/ENCFF858NEZ.fastq.gz Illumina HiSeq 2500 /files/ENCFF011LJK/, /files/ENCFF649MVC/ released missing genetic modification characterization missing control alignments ENCFF501KRI fastq reads ENCSR740NPG ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-BACH1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 1 50 single-ended 847369902 Kevin White, UChicago 6c57bd7c413f8aa40ee5b4551e8f0edc SRA:SRR6214118 https://www.encodeproject.org/files/ENCFF501KRI/@@download/ENCFF501KRI.fastq.gz Illumina HiSeq 2000 /files/ENCFF011LJK/, /files/ENCFF649MVC/ released missing genetic modification characterization missing control alignments ENCFF168MKQ fastq reads ENCSR740NPG ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-BACH1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 1 50 single-ended 876538452 Kevin White, UChicago a06c5073578ce42a2e77b21e4149df54 SRA:SRR6214116 https://www.encodeproject.org/files/ENCFF168MKQ/@@download/ENCFF168MKQ.fastq.gz Illumina HiSeq 2000 /files/ENCFF011LJK/, /files/ENCFF649MVC/ released missing genetic modification characterization missing control alignments ENCFF220WDD bam alignments ENCSR740NPG ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-BACH1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 50 ENCFF501KRI, ENCFF807MUK, ENCFF858NEZ 1222834227 ENCODE Processing Pipeline 286da69d49aa9c58ee4ecce65b327d23 https://www.encodeproject.org/files/ENCFF220WDD/@@download/ENCFF220WDD.bam hg19 released missing genetic modification characterization missing control alignments ENCFF812HBY bam alignments ENCSR740NPG ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-BACH1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 50 ENCFF168MKQ, ENCFF807MUK, ENCFF979UQU 1347825539 ENCODE Processing Pipeline a73f3af83f8e71a435db7011b7ce1ee8 https://www.encodeproject.org/files/ENCFF812HBY/@@download/ENCFF812HBY.bam hg19 released missing genetic modification characterization missing control alignments ENCFF503LJQ bigWig signal p-value ENCSR740NPG ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-BACH1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF220WDD, ENCFF736LGI 606282444 ENCODE Processing Pipeline 69fa211c453630993c0644101404ced1 https://www.encodeproject.org/files/ENCFF503LJQ/@@download/ENCFF503LJQ.bigWig hg19 released missing genetic modification characterization missing control alignments ENCFF077KEO bigWig signal p-value ENCSR740NPG ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-BACH1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF736LGI, ENCFF812HBY 748193186 ENCODE Processing Pipeline 9177e66c4249aeff7420ce34ac3ef686 https://www.encodeproject.org/files/ENCFF077KEO/@@download/ENCFF077KEO.bigWig hg19 released missing genetic modification characterization missing control alignments ENCFF894ERT bigWig signal p-value ENCSR740NPG ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-BACH1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF220WDD, ENCFF736LGI, ENCFF812HBY 834901180 ENCODE Processing Pipeline 78551340ae68a3b22c6f9fe3ae93b642 https://www.encodeproject.org/files/ENCFF894ERT/@@download/ENCFF894ERT.bigWig hg19 released missing genetic modification characterization missing control alignments ENCFF782OOT bigWig fold change over control ENCSR740NPG ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-BACH1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF736LGI, ENCFF812HBY 675756939 ENCODE Processing Pipeline c36038fb2dd4cb5f9d9fde1ba7ffc66e https://www.encodeproject.org/files/ENCFF782OOT/@@download/ENCFF782OOT.bigWig hg19 released missing genetic modification characterization missing control alignments ENCFF773RCF bigWig fold change over control ENCSR740NPG ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-BACH1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF220WDD, ENCFF736LGI 643573675 ENCODE Processing Pipeline 19d3d848cc939b9ec908e7cbc2786031 https://www.encodeproject.org/files/ENCFF773RCF/@@download/ENCFF773RCF.bigWig hg19 released missing genetic modification characterization missing control alignments ENCFF968KJF bigWig fold change over control ENCSR740NPG ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-BACH1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF220WDD, ENCFF736LGI, ENCFF812HBY 1018743107 ENCODE Processing Pipeline 14ef80e81cc65b453027ac47a2821490 https://www.encodeproject.org/files/ENCFF968KJF/@@download/ENCFF968KJF.bigWig hg19 released missing genetic modification characterization missing control alignments ENCFF772XDS bed narrowPeak peaks ENCSR740NPG ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-BACH1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF220WDD, ENCFF736LGI 6670751 ENCODE Processing Pipeline b7b315993188bf1abc678d70b38144eb https://www.encodeproject.org/files/ENCFF772XDS/@@download/ENCFF772XDS.bed.gz hg19 released missing genetic modification characterization missing control alignments ENCFF906RNM bigBed narrowPeak peaks ENCSR740NPG ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-BACH1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF469YOH 12673351 ENCODE Processing Pipeline 1d988e76f8bdf51ac312c4fa6346d097 https://www.encodeproject.org/files/ENCFF906RNM/@@download/ENCFF906RNM.bigBed hg19 released missing genetic modification characterization missing control alignments ENCFF244WXE bigBed narrowPeak peaks ENCSR740NPG ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-BACH1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF772XDS 12968181 ENCODE Processing Pipeline 48fe2288102ac2fa8f07557718a90bf6 https://www.encodeproject.org/files/ENCFF244WXE/@@download/ENCFF244WXE.bigBed hg19 released missing genetic modification characterization missing control alignments ENCFF469YOH bed narrowPeak peaks ENCSR740NPG ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-BACH1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF736LGI, ENCFF812HBY 7059386 ENCODE Processing Pipeline f50f1f3780c9198b3c3454752863a295 https://www.encodeproject.org/files/ENCFF469YOH/@@download/ENCFF469YOH.bed.gz hg19 released missing genetic modification characterization missing control alignments ENCFF820FCA bed narrowPeak peaks ENCSR740NPG ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-BACH1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF220WDD, ENCFF736LGI, ENCFF812HBY 7235484 ENCODE Processing Pipeline b9c2f1c3f5bbf0b61f08bfc1745bb904 https://www.encodeproject.org/files/ENCFF820FCA/@@download/ENCFF820FCA.bed.gz hg19 released missing genetic modification characterization missing control alignments ENCFF161ERU bigBed narrowPeak peaks ENCSR740NPG ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-BACH1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF820FCA 12709129 ENCODE Processing Pipeline be77fbdd16854eaa89ad0816ecf5b3bb https://www.encodeproject.org/files/ENCFF161ERU/@@download/ENCFF161ERU.bigBed hg19 released missing genetic modification characterization missing control alignments ENCFF616RIU bam unfiltered alignments ENCSR740NPG ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-BACH1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 50 ENCFF501KRI, ENCFF643CGH, ENCFF858NEZ 1605320400 ENCODE Processing Pipeline 5bb2f42145cb4618bac38e9f584ff4f9 https://www.encodeproject.org/files/ENCFF616RIU/@@download/ENCFF616RIU.bam GRCh38 released missing genetic modification characterization missing control alignments ENCFF221XVM bam alignments ENCSR740NPG ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-BACH1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 50 ENCFF501KRI, ENCFF643CGH, ENCFF858NEZ 1222236089 ENCODE Processing Pipeline 54165fe6de76ff77d1fb05229ef05689 https://www.encodeproject.org/files/ENCFF221XVM/@@download/ENCFF221XVM.bam GRCh38 released missing genetic modification characterization missing control alignments ENCFF407GKR bam unfiltered alignments ENCSR740NPG ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-BACH1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 50 ENCFF168MKQ, ENCFF643CGH, ENCFF979UQU 1916613030 ENCODE Processing Pipeline 4dba033202c62daf9345ee41aa80f170 https://www.encodeproject.org/files/ENCFF407GKR/@@download/ENCFF407GKR.bam GRCh38 released missing genetic modification characterization missing control alignments ENCFF042SJF bam alignments ENCSR740NPG ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-BACH1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 50 ENCFF168MKQ, ENCFF643CGH, ENCFF979UQU 1347079217 ENCODE Processing Pipeline 07b7ae8194db80c1071b83af6ef7721d https://www.encodeproject.org/files/ENCFF042SJF/@@download/ENCFF042SJF.bam GRCh38 released missing genetic modification characterization missing control alignments ENCFF837ASO bigWig signal p-value ENCSR740NPG ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-BACH1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF042SJF 692760224 ENCODE Processing Pipeline 6dfe351489d15e88be98d98a77722299 https://www.encodeproject.org/files/ENCFF837ASO/@@download/ENCFF837ASO.bigWig GRCh38 released missing genetic modification characterization missing control alignments ENCFF594WFX bigWig signal p-value ENCSR740NPG ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-BACH1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF221XVM 533848939 ENCODE Processing Pipeline 8f7cbb299f0c4593b6e4925ef5b066a1 https://www.encodeproject.org/files/ENCFF594WFX/@@download/ENCFF594WFX.bigWig GRCh38 released missing genetic modification characterization missing control alignments ENCFF701KHH bigWig fold change over control ENCSR740NPG ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-BACH1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF042SJF 684312782 ENCODE Processing Pipeline bbb58c20fdd2c4869a21f0eebbc96a12 https://www.encodeproject.org/files/ENCFF701KHH/@@download/ENCFF701KHH.bigWig GRCh38 released missing genetic modification characterization missing control alignments ENCFF513SZH bigWig signal p-value ENCSR740NPG ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-BACH1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF042SJF, ENCFF221XVM 830167805 ENCODE Processing Pipeline ce0941dc9fa649985b0ae1a9e3cfe669 https://www.encodeproject.org/files/ENCFF513SZH/@@download/ENCFF513SZH.bigWig GRCh38 released missing genetic modification characterization missing control alignments ENCFF332DKR bigWig fold change over control ENCSR740NPG ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-BACH1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF221XVM 620790645 ENCODE Processing Pipeline dc01a7bd47ab0eec160e08b3265693d0 https://www.encodeproject.org/files/ENCFF332DKR/@@download/ENCFF332DKR.bigWig GRCh38 released missing genetic modification characterization missing control alignments ENCFF245AYE bigWig fold change over control ENCSR740NPG ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-BACH1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF042SJF, ENCFF221XVM 1012194859 ENCODE Processing Pipeline 1e80c9746ea7579caa6d0de51379fe36 https://www.encodeproject.org/files/ENCFF245AYE/@@download/ENCFF245AYE.bigWig GRCh38 released missing genetic modification characterization missing control alignments ENCFF356MDE bed narrowPeak peaks ENCSR740NPG ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-BACH1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF221XVM 6495494 ENCODE Processing Pipeline 62ecdfedf414fcc71f91a2d32fd24d50 https://www.encodeproject.org/files/ENCFF356MDE/@@download/ENCFF356MDE.bed.gz GRCh38 released missing genetic modification characterization missing control alignments ENCFF669IOJ bigBed narrowPeak peaks ENCSR740NPG ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-BACH1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF356MDE 12979674 ENCODE Processing Pipeline e2fb6f453ace0b875d26a301820ffe43 https://www.encodeproject.org/files/ENCFF669IOJ/@@download/ENCFF669IOJ.bigBed GRCh38 released missing genetic modification characterization missing control alignments ENCFF443POG bed narrowPeak peaks ENCSR740NPG ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-BACH1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF042SJF, ENCFF221XVM 7172438 ENCODE Processing Pipeline 19fc6c3b735fb09b051f9e053458a806 https://www.encodeproject.org/files/ENCFF443POG/@@download/ENCFF443POG.bed.gz GRCh38 released missing genetic modification characterization missing control alignments ENCFF795UBE bed narrowPeak peaks ENCSR740NPG ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-BACH1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF042SJF 6964069 ENCODE Processing Pipeline 0cf18f474a866ebeabed10e75457c7aa https://www.encodeproject.org/files/ENCFF795UBE/@@download/ENCFF795UBE.bed.gz GRCh38 released missing genetic modification characterization missing control alignments ENCFF199FBA bigBed narrowPeak conservative idr thresholded peaks ENCSR740NPG ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-BACH1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF752RBV 587629 ENCODE Processing Pipeline 1298f58579f540ddc42da8f555d29ede https://www.encodeproject.org/files/ENCFF199FBA/@@download/ENCFF199FBA.bigBed GRCh38 released missing genetic modification characterization missing control alignments ENCFF752RBV bed narrowPeak conservative idr thresholded peaks ENCSR740NPG ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-BACH1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF356MDE, ENCFF419RSJ, ENCFF443POG, ENCFF795UBE 234782 ENCODE Processing Pipeline c187c9c6b62752e9ebf7303126535376 https://www.encodeproject.org/files/ENCFF752RBV/@@download/ENCFF752RBV.bed.gz GRCh38 released missing genetic modification characterization missing control alignments ENCFF365WQR bed narrowPeak optimal idr thresholded peaks ENCSR740NPG ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-BACH1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF356MDE, ENCFF419RSJ, ENCFF443POG, ENCFF795UBE 308624 ENCODE Processing Pipeline 7f044fedfd3ee72ba2de5399f6421de2 https://www.encodeproject.org/files/ENCFF365WQR/@@download/ENCFF365WQR.bed.gz GRCh38 released missing genetic modification characterization missing control alignments ENCFF135DVR bigBed narrowPeak peaks ENCSR740NPG ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-BACH1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF795UBE 12677425 ENCODE Processing Pipeline c2dfb520a8c46ffa375983ce4d15172f https://www.encodeproject.org/files/ENCFF135DVR/@@download/ENCFF135DVR.bigBed GRCh38 released missing genetic modification characterization missing control alignments ENCFF229NAA bigBed narrowPeak peaks ENCSR740NPG ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-BACH1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF443POG 12733941 ENCODE Processing Pipeline 2b8cace252d04f0eb575888e9e5cdb71 https://www.encodeproject.org/files/ENCFF229NAA/@@download/ENCFF229NAA.bigBed GRCh38 released missing genetic modification characterization missing control alignments ENCFF590IXA bigBed narrowPeak optimal idr thresholded peaks ENCSR740NPG ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-BACH1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF365WQR 724700 ENCODE Processing Pipeline fa282cf209fe43a045aaa97035c8a487 https://www.encodeproject.org/files/ENCFF590IXA/@@download/ENCFF590IXA.bigBed GRCh38 released missing genetic modification characterization missing control alignments ENCFF319BCP bed narrowPeak optimal idr thresholded peaks ENCSR740NPG ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-BACH1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF001TDO, ENCFF469YOH, ENCFF772XDS, ENCFF820FCA 249611 ENCODE Processing Pipeline 1a3945bf43921b404e8afa5fea99ca48 https://www.encodeproject.org/files/ENCFF319BCP/@@download/ENCFF319BCP.bed.gz hg19 released missing genetic modification characterization missing control alignments ENCFF606FPF bigBed narrowPeak optimal idr thresholded peaks ENCSR740NPG ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-BACH1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF319BCP 523861 ENCODE Processing Pipeline adaf8e3add04ed935a7d1c6ff41a4155 https://www.encodeproject.org/files/ENCFF606FPF/@@download/ENCFF606FPF.bigBed hg19 released missing genetic modification characterization missing control alignments ENCFF772AZG bigBed narrowPeak conservative idr thresholded peaks ENCSR740NPG ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-BACH1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF476YGX 433876 ENCODE Processing Pipeline 1604267f6502872063500d9eda9eb453 https://www.encodeproject.org/files/ENCFF772AZG/@@download/ENCFF772AZG.bigBed hg19 released missing genetic modification characterization missing control alignments ENCFF476YGX bed narrowPeak conservative idr thresholded peaks ENCSR740NPG ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-BACH1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF001TDO, ENCFF469YOH, ENCFF772XDS, ENCFF820FCA 190668 ENCODE Processing Pipeline 10cf300bc70b86079fd310bbd0d61d6b https://www.encodeproject.org/files/ENCFF476YGX/@@download/ENCFF476YGX.bed.gz hg19 released missing genetic modification characterization missing control alignments ENCFF000YSA bam alignments ENCSR000EGN ChIP-seq EFO:0002067 K562 cell line Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2011-10-29 ENCODE 1 1 387697470 Michael Snyder, Stanford 3b03d916e103943359eb4a69904a98a1 https://www.encodeproject.org/files/ENCFF000YSA/@@download/ENCFF000YSA.bam hg19 archived borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample, missing derived_from ENCFF000YSB bigBed narrowPeak peaks ENCSR000EGN ChIP-seq EFO:0002067 K562 cell line Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2011-10-29 ENCODE ENCFF001VNP 4228158 Michael Snyder, Stanford 93715cf7b1f56c0007efca4db6914471 https://www.encodeproject.org/files/ENCFF000YSB/@@download/ENCFF000YSB.bigBed hg19 archived borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF000YSC fastq reads ENCSR000EGN ChIP-seq EFO:0002067 K562 cell line Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2011-10-29 ENCODE 1 1 36 single-ended 765311647 Michael Snyder, Stanford 358fe8daa1481229469bb3861d84fc63 https://www.encodeproject.org/files/ENCFF000YSC/@@download/ENCFF000YSC.fastq.gz Illumina Genome Analyzer /files/ENCFF000YRB/ released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF000YSE fastq reads ENCSR000EGN ChIP-seq EFO:0002067 K562 cell line Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2011-10-29 ENCODE 2 1 36 single-ended 1254925256 Michael Snyder, Stanford 689f632f6e28b3c871882c82c016014a https://www.encodeproject.org/files/ENCFF000YSE/@@download/ENCFF000YSE.fastq.gz Illumina Genome Analyzer /files/ENCFF000YRB/ released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF000YSG bigWig signal ENCSR000EGN ChIP-seq EFO:0002067 K562 cell line Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2011-10-29 ENCODE 398179429 Michael Snyder, Stanford c1a576be5d1311db7427473ae4d825e6 https://www.encodeproject.org/files/ENCFF000YSG/@@download/ENCFF000YSG.bigWig hg19 archived borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample, missing derived_from ENCFF000YSH bam alignments ENCSR000EGN ChIP-seq EFO:0002067 K562 cell line Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2011-10-29 ENCODE 2 1 678377047 Michael Snyder, Stanford 022146308a81871af81efe1e70bdf212 https://www.encodeproject.org/files/ENCFF000YSH/@@download/ENCFF000YSH.bam hg19 archived borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample, missing derived_from ENCFF001VNP bed narrowPeak peaks ENCSR000EGN ChIP-seq EFO:0002067 K562 cell line Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2011-10-29 ENCODE 1778034 Michael Snyder, Stanford ab5e64ba56a9a195b2d841a044d1d435 https://www.encodeproject.org/files/ENCFF001VNP/@@download/ENCFF001VNP.bed.gz hg19 archived borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample, missing derived_from ENCFF002CWZ bed narrowPeak optimal idr thresholded peaks ENCSR000EGN ChIP-seq EFO:0002067 K562 cell line Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2011-10-29 ENCODE 788904 ENCODE Consortium Analysis Working Group fc92c89774100278488f9604f2b41d14 https://www.encodeproject.org/files/ENCFF002CWZ/@@download/ENCFF002CWZ.bed.gz hg19 archived borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample, missing derived_from ENCFF568UCC bigBed narrowPeak optimal idr thresholded peaks ENCSR000EGN ChIP-seq EFO:0002067 K562 cell line Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2011-10-29 ENCODE ENCFF002CWZ 1499983 ENCODE Consortium 06559bea315a85e4b360deba834563e9 https://www.encodeproject.org/files/ENCFF568UCC/@@download/ENCFF568UCC.bigBed hg19 archived borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF417DVP bam unfiltered alignments ENCSR000EGN ChIP-seq EFO:0002067 K562 cell line Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2011-10-29 ENCODE 1 36 ENCFF000YSC, ENCFF807MUK 874491669 ENCODE Processing Pipeline 4b18c253215d14541301f02dd2165c94 https://www.encodeproject.org/files/ENCFF417DVP/@@download/ENCFF417DVP.bam hg19 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF904GCT bam alignments ENCSR000EGN ChIP-seq EFO:0002067 K562 cell line Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2011-10-29 ENCODE 1 36 ENCFF000YSC, ENCFF807MUK 605438872 ENCODE Processing Pipeline 4a07762085c9b08727f7ef525be97716 https://www.encodeproject.org/files/ENCFF904GCT/@@download/ENCFF904GCT.bam hg19 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF663HKN bam unfiltered alignments ENCSR000EGN ChIP-seq EFO:0002067 K562 cell line Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2011-10-29 ENCODE 2 36 ENCFF000YSE, ENCFF807MUK 1382969301 ENCODE Processing Pipeline 162e017e784692a86166985900443597 https://www.encodeproject.org/files/ENCFF663HKN/@@download/ENCFF663HKN.bam hg19 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF532IBJ bam alignments ENCSR000EGN ChIP-seq EFO:0002067 K562 cell line Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2011-10-29 ENCODE 2 36 ENCFF000YSE, ENCFF807MUK 983873092 ENCODE Processing Pipeline cf48332cf63a44f7cb9ae94683c55485 https://www.encodeproject.org/files/ENCFF532IBJ/@@download/ENCFF532IBJ.bam hg19 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF800MCM bam unfiltered alignments ENCSR000EGN ChIP-seq EFO:0002067 K562 cell line Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2011-10-29 ENCODE 1 36 ENCFF000YSC, ENCFF643CGH 877308906 ENCODE Processing Pipeline d52e73ebdce508f4bee54778bac83044 https://www.encodeproject.org/files/ENCFF800MCM/@@download/ENCFF800MCM.bam GRCh38 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF624HEI bam unfiltered alignments ENCSR000EGN ChIP-seq EFO:0002067 K562 cell line Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2011-10-29 ENCODE 2 36 ENCFF000YSE, ENCFF643CGH 1387276557 ENCODE Processing Pipeline d307b5087b7451b0d5d2eee150420058 https://www.encodeproject.org/files/ENCFF624HEI/@@download/ENCFF624HEI.bam GRCh38 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF400BSN bam alignments ENCSR000EGN ChIP-seq EFO:0002067 K562 cell line Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2011-10-29 ENCODE 1 36 ENCFF000YSC, ENCFF643CGH 604873580 ENCODE Processing Pipeline 26ab887f1bc2d49d0ec1515bd2bb4f19 https://www.encodeproject.org/files/ENCFF400BSN/@@download/ENCFF400BSN.bam GRCh38 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF321ZQU bam alignments ENCSR000EGN ChIP-seq EFO:0002067 K562 cell line Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2011-10-29 ENCODE 2 36 ENCFF000YSE, ENCFF643CGH 983134574 ENCODE Processing Pipeline 99aae290f9a2319d1f37728f91a552b6 https://www.encodeproject.org/files/ENCFF321ZQU/@@download/ENCFF321ZQU.bam GRCh38 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF916YPG bigWig signal p-value ENCSR000EGN ChIP-seq EFO:0002067 K562 cell line Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF532IBJ, ENCFF710NTS, ENCFF904GCT 531304381 ENCODE Processing Pipeline 0428548b292fa8e28e24e3c948f314b2 https://www.encodeproject.org/files/ENCFF916YPG/@@download/ENCFF916YPG.bigWig hg19 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF941ZJD bigBed narrowPeak conservative idr thresholded peaks ENCSR000EGN ChIP-seq EFO:0002067 K562 cell line Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF774OPQ 1077144 ENCODE Processing Pipeline bf1ed1a1690325675163dfb9dce60eb3 https://www.encodeproject.org/files/ENCFF941ZJD/@@download/ENCFF941ZJD.bigBed hg19 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF296KNV bigWig signal p-value ENCSR000EGN ChIP-seq EFO:0002067 K562 cell line Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2011-10-29 ENCODE 2 ENCFF532IBJ, ENCFF710NTS 507926239 ENCODE Processing Pipeline 32668e0f93ceab2fe595a3ce508c2c55 https://www.encodeproject.org/files/ENCFF296KNV/@@download/ENCFF296KNV.bigWig hg19 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF709JGL bigWig fold change over control ENCSR000EGN ChIP-seq EFO:0002067 K562 cell line Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF532IBJ, ENCFF710NTS, ENCFF904GCT 660230961 ENCODE Processing Pipeline a91837e9a47f78f61ab2d5361b18ae8b https://www.encodeproject.org/files/ENCFF709JGL/@@download/ENCFF709JGL.bigWig hg19 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF223USW bigWig signal p-value ENCSR000EGN ChIP-seq EFO:0002067 K562 cell line Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2011-10-29 ENCODE 1 ENCFF710NTS, ENCFF904GCT 402735467 ENCODE Processing Pipeline 40fe4d3e109c0fdecd7fc21df09ce3fc https://www.encodeproject.org/files/ENCFF223USW/@@download/ENCFF223USW.bigWig hg19 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF159IRT bed narrowPeak peaks ENCSR000EGN ChIP-seq EFO:0002067 K562 cell line Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2011-10-29 ENCODE 1 ENCFF710NTS, ENCFF904GCT 4828402 ENCODE Processing Pipeline 1aadafa6f0c66521cb34dd178f33868b https://www.encodeproject.org/files/ENCFF159IRT/@@download/ENCFF159IRT.bed.gz hg19 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF367HPL bed narrowPeak peaks ENCSR000EGN ChIP-seq EFO:0002067 K562 cell line Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2011-10-29 ENCODE 2 ENCFF532IBJ, ENCFF710NTS 5543746 ENCODE Processing Pipeline f1705fbca0567dced7c801e7385cff4e https://www.encodeproject.org/files/ENCFF367HPL/@@download/ENCFF367HPL.bed.gz hg19 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF599WWQ bigWig fold change over control ENCSR000EGN ChIP-seq EFO:0002067 K562 cell line Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2011-10-29 ENCODE 1 ENCFF710NTS, ENCFF904GCT 314492071 ENCODE Processing Pipeline f392607b6627c1d0b25b1999faed398a https://www.encodeproject.org/files/ENCFF599WWQ/@@download/ENCFF599WWQ.bigWig hg19 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF774OPQ bed narrowPeak conservative idr thresholded peaks ENCSR000EGN ChIP-seq EFO:0002067 K562 cell line Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF001TDO, ENCFF159IRT, ENCFF367HPL, ENCFF844LUC 665238 ENCODE Processing Pipeline b3fafbad2fadd92c91718e6f7b0a8afc https://www.encodeproject.org/files/ENCFF774OPQ/@@download/ENCFF774OPQ.bed.gz hg19 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF223ARA bigWig fold change over control ENCSR000EGN ChIP-seq EFO:0002067 K562 cell line Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2011-10-29 ENCODE 2 ENCFF532IBJ, ENCFF710NTS 460848116 ENCODE Processing Pipeline d91dc58cc3ab2eae9e9923607540d653 https://www.encodeproject.org/files/ENCFF223ARA/@@download/ENCFF223ARA.bigWig hg19 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF139PBV bigBed narrowPeak peaks ENCSR000EGN ChIP-seq EFO:0002067 K562 cell line Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2011-10-29 ENCODE 2 ENCFF367HPL 10982494 ENCODE Processing Pipeline 7fd6789ec08d1f4187b8409363b9f5c5 https://www.encodeproject.org/files/ENCFF139PBV/@@download/ENCFF139PBV.bigBed hg19 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF337DKJ bed narrowPeak optimal idr thresholded peaks ENCSR000EGN ChIP-seq EFO:0002067 K562 cell line Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF001TDO, ENCFF159IRT, ENCFF367HPL, ENCFF844LUC 761693 ENCODE Processing Pipeline 3a2d773ef2c1c39f7ac48b0924f2febe https://www.encodeproject.org/files/ENCFF337DKJ/@@download/ENCFF337DKJ.bed.gz hg19 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF844LUC bed narrowPeak peaks ENCSR000EGN ChIP-seq EFO:0002067 K562 cell line Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF532IBJ, ENCFF710NTS, ENCFF904GCT 6005735 ENCODE Processing Pipeline fd8465215b193f6a6e08d11e0279e439 https://www.encodeproject.org/files/ENCFF844LUC/@@download/ENCFF844LUC.bed.gz hg19 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF833EDX bigBed narrowPeak peaks ENCSR000EGN ChIP-seq EFO:0002067 K562 cell line Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2011-10-29 ENCODE 1 ENCFF159IRT 10560899 ENCODE Processing Pipeline 2bee13a0b4d864afbdc61c0e0fcfd4bc https://www.encodeproject.org/files/ENCFF833EDX/@@download/ENCFF833EDX.bigBed hg19 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF732RSA bigBed narrowPeak peaks ENCSR000EGN ChIP-seq EFO:0002067 K562 cell line Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF844LUC 13206001 ENCODE Processing Pipeline 99163accd3105d70a11ccc69ddd9255a https://www.encodeproject.org/files/ENCFF732RSA/@@download/ENCFF732RSA.bigBed hg19 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF779WXV bigBed narrowPeak optimal idr thresholded peaks ENCSR000EGN ChIP-seq EFO:0002067 K562 cell line Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF337DKJ 1198679 ENCODE Processing Pipeline 6f377538f701501b62a7edb69fd8edb5 https://www.encodeproject.org/files/ENCFF779WXV/@@download/ENCFF779WXV.bigBed hg19 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF428CGY bigWig signal p-value ENCSR000EGN ChIP-seq EFO:0002067 K562 cell line Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2011-10-29 ENCODE 2 ENCFF023NGN, ENCFF321ZQU 540058606 ENCODE Processing Pipeline acf6920a0ed8a6bc747965c44591bad0 https://www.encodeproject.org/files/ENCFF428CGY/@@download/ENCFF428CGY.bigWig GRCh38 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF067ULI bigBed narrowPeak optimal idr thresholded peaks ENCSR000EGN ChIP-seq EFO:0002067 K562 cell line Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF213EYD 1570747 ENCODE Processing Pipeline 5648cd6a94c295a1ed6a6fbd42809831 https://www.encodeproject.org/files/ENCFF067ULI/@@download/ENCFF067ULI.bigBed GRCh38 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF788JLS bigWig signal p-value ENCSR000EGN ChIP-seq EFO:0002067 K562 cell line Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF023NGN, ENCFF321ZQU, ENCFF400BSN 565409134 ENCODE Processing Pipeline 3496e50923ad0304bb05c02cfbe955f2 https://www.encodeproject.org/files/ENCFF788JLS/@@download/ENCFF788JLS.bigWig GRCh38 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF115PVX bigBed narrowPeak peaks ENCSR000EGN ChIP-seq EFO:0002067 K562 cell line Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2011-10-29 ENCODE 1 ENCFF416NHC 10728774 ENCODE Processing Pipeline 31e6c3b9b136612e5adfed0983d32bdf https://www.encodeproject.org/files/ENCFF115PVX/@@download/ENCFF115PVX.bigBed GRCh38 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF825PKD bigWig fold change over control ENCSR000EGN ChIP-seq EFO:0002067 K562 cell line Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2011-10-29 ENCODE 2 ENCFF023NGN, ENCFF321ZQU 468448635 ENCODE Processing Pipeline 3e6906a1e64e734b362e601fc85501c0 https://www.encodeproject.org/files/ENCFF825PKD/@@download/ENCFF825PKD.bigWig GRCh38 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF024PVQ bigWig fold change over control ENCSR000EGN ChIP-seq EFO:0002067 K562 cell line Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF023NGN, ENCFF321ZQU, ENCFF400BSN 677767966 ENCODE Processing Pipeline 3c0a67fcc376cc21d9d78a87a5f328b2 https://www.encodeproject.org/files/ENCFF024PVQ/@@download/ENCFF024PVQ.bigWig GRCh38 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF947ZIF bigWig signal p-value ENCSR000EGN ChIP-seq EFO:0002067 K562 cell line Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2011-10-29 ENCODE 1 ENCFF023NGN, ENCFF400BSN 431640449 ENCODE Processing Pipeline e99a731252b9fe51bf997730a0add9e0 https://www.encodeproject.org/files/ENCFF947ZIF/@@download/ENCFF947ZIF.bigWig GRCh38 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF206VHL bigWig fold change over control ENCSR000EGN ChIP-seq EFO:0002067 K562 cell line Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2011-10-29 ENCODE 1 ENCFF023NGN, ENCFF400BSN 313370274 ENCODE Processing Pipeline 57a736cc557644861333313a85ade4b3 https://www.encodeproject.org/files/ENCFF206VHL/@@download/ENCFF206VHL.bigWig GRCh38 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF416NHC bed narrowPeak peaks ENCSR000EGN ChIP-seq EFO:0002067 K562 cell line Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2011-10-29 ENCODE 1 ENCFF023NGN, ENCFF400BSN 4962159 ENCODE Processing Pipeline d83714f13c2bdcd19e88bc46778b12b6 https://www.encodeproject.org/files/ENCFF416NHC/@@download/ENCFF416NHC.bed.gz GRCh38 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF587YQM bed narrowPeak peaks ENCSR000EGN ChIP-seq EFO:0002067 K562 cell line Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2011-10-29 ENCODE 2 ENCFF023NGN, ENCFF321ZQU 5592576 ENCODE Processing Pipeline 600e934e76282c503150b0a9653e6d36 https://www.encodeproject.org/files/ENCFF587YQM/@@download/ENCFF587YQM.bed.gz GRCh38 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF571YBD bed narrowPeak peaks ENCSR000EGN ChIP-seq EFO:0002067 K562 cell line Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF023NGN, ENCFF321ZQU, ENCFF400BSN 6153337 ENCODE Processing Pipeline 7d2b966d4712f84fabbda31debaf2757 https://www.encodeproject.org/files/ENCFF571YBD/@@download/ENCFF571YBD.bed.gz GRCh38 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF527HNJ bigBed narrowPeak peaks ENCSR000EGN ChIP-seq EFO:0002067 K562 cell line Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2011-10-29 ENCODE 2 ENCFF587YQM 13209644 ENCODE Processing Pipeline 8ff82dc8fe8f02c80c19c17680861544 https://www.encodeproject.org/files/ENCFF527HNJ/@@download/ENCFF527HNJ.bigBed GRCh38 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF826HDC bed narrowPeak conservative idr thresholded peaks ENCSR000EGN ChIP-seq EFO:0002067 K562 cell line Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF416NHC, ENCFF419RSJ, ENCFF571YBD, ENCFF587YQM 711297 ENCODE Processing Pipeline 3ee82424a1d7aeb2fddde0e757dc775a https://www.encodeproject.org/files/ENCFF826HDC/@@download/ENCFF826HDC.bed.gz GRCh38 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF201ONX bigBed narrowPeak conservative idr thresholded peaks ENCSR000EGN ChIP-seq EFO:0002067 K562 cell line Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF826HDC 1425173 ENCODE Processing Pipeline bb2bb176f9ec3403d6043aafcf5a2a98 https://www.encodeproject.org/files/ENCFF201ONX/@@download/ENCFF201ONX.bigBed GRCh38 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF044BSU bigBed narrowPeak peaks ENCSR000EGN ChIP-seq EFO:0002067 K562 cell line Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF571YBD 13393558 ENCODE Processing Pipeline d13d42d84bd58c8ee1d35ffda8c894f3 https://www.encodeproject.org/files/ENCFF044BSU/@@download/ENCFF044BSU.bigBed GRCh38 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF213EYD bed narrowPeak optimal idr thresholded peaks ENCSR000EGN ChIP-seq EFO:0002067 K562 cell line Homo sapiens JUND-human ENCAB000AID DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF416NHC, ENCFF419RSJ, ENCFF571YBD, ENCFF587YQM 808369 ENCODE Processing Pipeline 46a248a637663e0555402451943362c9 https://www.encodeproject.org/files/ENCFF213EYD/@@download/ENCFF213EYD.bed.gz GRCh38 released borderline replicate concordance, low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF829IFG bam unfiltered alignments ENCSR115SMW ChIP-seq EFO:0002067 K562 cell line Homo sapiens PKNOX1-human ENCAB000ATJ DNA False 2016-06-14 ENCODE 2 100 ENCFF807MUK, ENCFF871SUI, ENCFF921VOK 5134062302 ENCODE Processing Pipeline 70d15d06ed2d1b746a478fc8a257ad97 https://www.encodeproject.org/files/ENCFF829IFG/@@download/ENCFF829IFG.bam hg19 released ENCFF334HIN bam unfiltered alignments ENCSR115SMW ChIP-seq EFO:0002067 K562 cell line Homo sapiens PKNOX1-human ENCAB000ATJ DNA False 2016-06-14 ENCODE 1 100 ENCFF292YNE, ENCFF755HHM, ENCFF807MUK 5984170760 ENCODE Processing Pipeline c4b4ccd4dd318ccac7bab899bcc9c13e https://www.encodeproject.org/files/ENCFF334HIN/@@download/ENCFF334HIN.bam hg19 released ENCFF755HHM fastq reads ENCSR115SMW ChIP-seq EFO:0002067 K562 cell line Homo sapiens PKNOX1-human ENCAB000ATJ DNA False 2016-06-14 ENCODE 1 1 100 paired-ended 1 ENCFF292YNE 2883563015 Michael Snyder, Stanford 5c94c97283c36b75d150263500a38a4b SRA:SRR5111140 https://www.encodeproject.org/files/ENCFF755HHM/@@download/ENCFF755HHM.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFF/ released ENCFF292YNE fastq reads ENCSR115SMW ChIP-seq EFO:0002067 K562 cell line Homo sapiens PKNOX1-human ENCAB000ATJ DNA False 2016-06-14 ENCODE 1 1 100 paired-ended 2 ENCFF755HHM 2922149424 Michael Snyder, Stanford 0c9c1a65bb2e467d9b76c87fd3aac252 SRA:SRR5111140 https://www.encodeproject.org/files/ENCFF292YNE/@@download/ENCFF292YNE.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFH/ released ENCFF871SUI fastq reads ENCSR115SMW ChIP-seq EFO:0002067 K562 cell line Homo sapiens PKNOX1-human ENCAB000ATJ DNA False 2016-06-14 ENCODE 2 1 100 paired-ended 2 ENCFF921VOK 2553316350 Michael Snyder, Stanford a656484cb7843dff489b1aad9142eb1a SRA:SRR5111139 https://www.encodeproject.org/files/ENCFF871SUI/@@download/ENCFF871SUI.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFA/ released ENCFF921VOK fastq reads ENCSR115SMW ChIP-seq EFO:0002067 K562 cell line Homo sapiens PKNOX1-human ENCAB000ATJ DNA False 2016-06-14 ENCODE 2 1 100 paired-ended 1 ENCFF871SUI 2471054018 Michael Snyder, Stanford 3660f89b9863ec81a7e584a7510a43bf SRA:SRR5111139 https://www.encodeproject.org/files/ENCFF921VOK/@@download/ENCFF921VOK.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFD/ released ENCFF133FDG bam alignments ENCSR115SMW ChIP-seq EFO:0002067 K562 cell line Homo sapiens PKNOX1-human ENCAB000ATJ DNA False 2016-06-14 ENCODE 2 100 ENCFF807MUK, ENCFF871SUI, ENCFF921VOK 4310439932 ENCODE Processing Pipeline cbbad4454ca2f3ac94e5f8c7b02c9dbd https://www.encodeproject.org/files/ENCFF133FDG/@@download/ENCFF133FDG.bam hg19 released ENCFF394VWK bam alignments ENCSR115SMW ChIP-seq EFO:0002067 K562 cell line Homo sapiens PKNOX1-human ENCAB000ATJ DNA False 2016-06-14 ENCODE 1 100 ENCFF292YNE, ENCFF755HHM, ENCFF807MUK 4932420553 ENCODE Processing Pipeline 1084c4c34861c017d624754d324b4348 https://www.encodeproject.org/files/ENCFF394VWK/@@download/ENCFF394VWK.bam hg19 released ENCFF182LJE bigWig signal p-value ENCSR115SMW ChIP-seq EFO:0002067 K562 cell line Homo sapiens PKNOX1-human ENCAB000ATJ DNA False 2016-06-14 ENCODE 2 ENCFF051LWI, ENCFF133FDG 1098808646 ENCODE Processing Pipeline e437e9b0e3123ea66c537b632da2bfa4 https://www.encodeproject.org/files/ENCFF182LJE/@@download/ENCFF182LJE.bigWig hg19 released ENCFF964WPN bigWig fold change over control ENCSR115SMW ChIP-seq EFO:0002067 K562 cell line Homo sapiens PKNOX1-human ENCAB000ATJ DNA False 2016-06-14 ENCODE 2 ENCFF051LWI, ENCFF133FDG 1119830481 ENCODE Processing Pipeline 688ddae3d7674814a9fc0f7c30017508 https://www.encodeproject.org/files/ENCFF964WPN/@@download/ENCFF964WPN.bigWig hg19 released ENCFF653BMD bam unfiltered alignments ENCSR115SMW ChIP-seq EFO:0002067 K562 cell line Homo sapiens PKNOX1-human ENCAB000ATJ DNA False 2016-06-14 ENCODE 2 100 ENCFF643CGH, ENCFF871SUI, ENCFF921VOK 5135909987 ENCODE Processing Pipeline b4f41ba7d5b130f13030a7349f0501a6 https://www.encodeproject.org/files/ENCFF653BMD/@@download/ENCFF653BMD.bam GRCh38 released ENCFF672RSD bam unfiltered alignments ENCSR115SMW ChIP-seq EFO:0002067 K562 cell line Homo sapiens PKNOX1-human ENCAB000ATJ DNA False 2016-06-14 ENCODE 1 100 ENCFF292YNE, ENCFF643CGH, ENCFF755HHM 5987068071 ENCODE Processing Pipeline 88bcee8d311b3148815210e80c79b3a5 https://www.encodeproject.org/files/ENCFF672RSD/@@download/ENCFF672RSD.bam GRCh38 released ENCFF494OJC bam alignments ENCSR115SMW ChIP-seq EFO:0002067 K562 cell line Homo sapiens PKNOX1-human ENCAB000ATJ DNA False 2016-06-14 ENCODE 2 100 ENCFF643CGH, ENCFF871SUI, ENCFF921VOK 4311976089 ENCODE Processing Pipeline 2d65c7556cc5db129801d80506fdd246 https://www.encodeproject.org/files/ENCFF494OJC/@@download/ENCFF494OJC.bam GRCh38 released ENCFF636IGK bam alignments ENCSR115SMW ChIP-seq EFO:0002067 K562 cell line Homo sapiens PKNOX1-human ENCAB000ATJ DNA False 2016-06-14 ENCODE 1 100 ENCFF292YNE, ENCFF643CGH, ENCFF755HHM 4933959486 ENCODE Processing Pipeline 0882c696da4df92e3868e2b859555aea https://www.encodeproject.org/files/ENCFF636IGK/@@download/ENCFF636IGK.bam GRCh38 released ENCFF446PWR bigWig signal p-value ENCSR115SMW ChIP-seq EFO:0002067 K562 cell line Homo sapiens PKNOX1-human ENCAB000ATJ DNA False 2016-06-14 ENCODE 1 ENCFF636IGK, ENCFF910IKB 1098481069 ENCODE Processing Pipeline 954df50ebe9291f8fef37b38cc6b9584 https://www.encodeproject.org/files/ENCFF446PWR/@@download/ENCFF446PWR.bigWig GRCh38 released ENCFF306BOX bigWig signal p-value ENCSR115SMW ChIP-seq EFO:0002067 K562 cell line Homo sapiens PKNOX1-human ENCAB000ATJ DNA False 2016-06-14 ENCODE 2 ENCFF227IZS, ENCFF494OJC 1178588340 ENCODE Processing Pipeline 3f1b33b13a2519b49ed5c4399785bbfa https://www.encodeproject.org/files/ENCFF306BOX/@@download/ENCFF306BOX.bigWig GRCh38 released ENCFF825XZN bigWig signal p-value ENCSR115SMW ChIP-seq EFO:0002067 K562 cell line Homo sapiens PKNOX1-human ENCAB000ATJ DNA False 2016-06-14 ENCODE 1, 2 ENCFF227IZS, ENCFF494OJC, ENCFF636IGK, ENCFF910IKB 1756130624 ENCODE Processing Pipeline 2d8872635fa18ecc3db5388920d473f5 https://www.encodeproject.org/files/ENCFF825XZN/@@download/ENCFF825XZN.bigWig GRCh38 released ENCFF426SDA bigWig fold change over control ENCSR115SMW ChIP-seq EFO:0002067 K562 cell line Homo sapiens PKNOX1-human ENCAB000ATJ DNA False 2016-06-14 ENCODE 1 ENCFF636IGK, ENCFF910IKB 1257541512 ENCODE Processing Pipeline 074f0dd001c47fa6dd4b09ec3f88d761 https://www.encodeproject.org/files/ENCFF426SDA/@@download/ENCFF426SDA.bigWig GRCh38 released ENCFF462JTB bigWig fold change over control ENCSR115SMW ChIP-seq EFO:0002067 K562 cell line Homo sapiens PKNOX1-human ENCAB000ATJ DNA False 2016-06-14 ENCODE 2 ENCFF227IZS, ENCFF494OJC 1116613311 ENCODE Processing Pipeline ed3b23e9f5034fdedc94897c42d6ac32 https://www.encodeproject.org/files/ENCFF462JTB/@@download/ENCFF462JTB.bigWig GRCh38 released ENCFF229VFD bigWig fold change over control ENCSR115SMW ChIP-seq EFO:0002067 K562 cell line Homo sapiens PKNOX1-human ENCAB000ATJ DNA False 2016-06-14 ENCODE 1, 2 ENCFF227IZS, ENCFF494OJC, ENCFF636IGK, ENCFF910IKB 2098818318 ENCODE Processing Pipeline a280ba174f04e006e44689607a6959ce https://www.encodeproject.org/files/ENCFF229VFD/@@download/ENCFF229VFD.bigWig GRCh38 released ENCFF869FII bed narrowPeak peaks ENCSR115SMW ChIP-seq EFO:0002067 K562 cell line Homo sapiens PKNOX1-human ENCAB000ATJ DNA False 2016-06-14 ENCODE 2 ENCFF227IZS, ENCFF494OJC 6941106 ENCODE Processing Pipeline 361afd2fa5e03ad6915e779742d5bfb4 https://www.encodeproject.org/files/ENCFF869FII/@@download/ENCFF869FII.bed.gz GRCh38 released ENCFF726HXU bed narrowPeak peaks ENCSR115SMW ChIP-seq EFO:0002067 K562 cell line Homo sapiens PKNOX1-human ENCAB000ATJ DNA False 2016-06-14 ENCODE 1, 2 ENCFF227IZS, ENCFF494OJC, ENCFF636IGK, ENCFF910IKB 7031917 ENCODE Processing Pipeline 934fef71495b6b0afc0c97a4ece6b7f5 https://www.encodeproject.org/files/ENCFF726HXU/@@download/ENCFF726HXU.bed.gz GRCh38 released ENCFF700WGW bed narrowPeak peaks ENCSR115SMW ChIP-seq EFO:0002067 K562 cell line Homo sapiens PKNOX1-human ENCAB000ATJ DNA False 2016-06-14 ENCODE 1 ENCFF636IGK, ENCFF910IKB 7007895 ENCODE Processing Pipeline 7c0956da2de099e0a3f9eccd1c04f481 https://www.encodeproject.org/files/ENCFF700WGW/@@download/ENCFF700WGW.bed.gz GRCh38 released ENCFF722ZVO bigBed narrowPeak peaks ENCSR115SMW ChIP-seq EFO:0002067 K562 cell line Homo sapiens PKNOX1-human ENCAB000ATJ DNA False 2016-06-14 ENCODE 1 ENCFF700WGW 13288745 ENCODE Processing Pipeline 998be8d0e4970b30ce26deeb335dc079 https://www.encodeproject.org/files/ENCFF722ZVO/@@download/ENCFF722ZVO.bigBed GRCh38 released ENCFF127FIU bigBed narrowPeak peaks ENCSR115SMW ChIP-seq EFO:0002067 K562 cell line Homo sapiens PKNOX1-human ENCAB000ATJ DNA False 2016-06-14 ENCODE 2 ENCFF869FII 13243610 ENCODE Processing Pipeline dff5de0f86b3d9d7728112f7e90536f1 https://www.encodeproject.org/files/ENCFF127FIU/@@download/ENCFF127FIU.bigBed GRCh38 released ENCFF199VOE bigBed narrowPeak peaks ENCSR115SMW ChIP-seq EFO:0002067 K562 cell line Homo sapiens PKNOX1-human ENCAB000ATJ DNA False 2016-06-14 ENCODE 1, 2 ENCFF726HXU 13135378 ENCODE Processing Pipeline 4eecaaf8016a64b5706f8086d86cdeb6 https://www.encodeproject.org/files/ENCFF199VOE/@@download/ENCFF199VOE.bigBed GRCh38 released ENCFF804ARW bed narrowPeak conservative idr thresholded peaks ENCSR115SMW ChIP-seq EFO:0002067 K562 cell line Homo sapiens PKNOX1-human ENCAB000ATJ DNA False 2016-06-14 ENCODE 1, 2 ENCFF419RSJ, ENCFF700WGW, ENCFF726HXU, ENCFF869FII 721962 ENCODE Processing Pipeline 2ee5336f432bfb83f545595ff44fd506 https://www.encodeproject.org/files/ENCFF804ARW/@@download/ENCFF804ARW.bed.gz GRCh38 released ENCFF336AXR bigBed narrowPeak conservative idr thresholded peaks ENCSR115SMW ChIP-seq EFO:0002067 K562 cell line Homo sapiens PKNOX1-human ENCAB000ATJ DNA False 2016-06-14 ENCODE 1, 2 ENCFF804ARW 1441574 ENCODE Processing Pipeline 95b7fb131cf27ceefc6abf2963837fb5 https://www.encodeproject.org/files/ENCFF336AXR/@@download/ENCFF336AXR.bigBed GRCh38 released ENCFF062VBB bed narrowPeak optimal idr thresholded peaks ENCSR115SMW ChIP-seq EFO:0002067 K562 cell line Homo sapiens PKNOX1-human ENCAB000ATJ DNA False 2016-06-14 ENCODE 1, 2 ENCFF419RSJ, ENCFF700WGW, ENCFF726HXU, ENCFF869FII 887713 ENCODE Processing Pipeline bf16b0269116a4fa4b389df05237843a https://www.encodeproject.org/files/ENCFF062VBB/@@download/ENCFF062VBB.bed.gz GRCh38 released ENCFF403NDS bigBed narrowPeak optimal idr thresholded peaks ENCSR115SMW ChIP-seq EFO:0002067 K562 cell line Homo sapiens PKNOX1-human ENCAB000ATJ DNA False 2016-06-14 ENCODE 1, 2 ENCFF062VBB 1687664 ENCODE Processing Pipeline 114bac80a46a137313d2b5bcb833a8db https://www.encodeproject.org/files/ENCFF403NDS/@@download/ENCFF403NDS.bigBed GRCh38 released ENCFF899JZM bigWig signal p-value ENCSR115SMW ChIP-seq EFO:0002067 K562 cell line Homo sapiens PKNOX1-human ENCAB000ATJ DNA False 2016-06-14 ENCODE 1 ENCFF394VWK, ENCFF581ZJL 1302115688 ENCODE Processing Pipeline d78e3583eb873a240da8fb4e2a81b8f2 https://www.encodeproject.org/files/ENCFF899JZM/@@download/ENCFF899JZM.bigWig hg19 released ENCFF258LRW bigWig fold change over control ENCSR115SMW ChIP-seq EFO:0002067 K562 cell line Homo sapiens PKNOX1-human ENCAB000ATJ DNA False 2016-06-14 ENCODE 1, 2 ENCFF051LWI, ENCFF133FDG, ENCFF394VWK, ENCFF581ZJL 2097135517 ENCODE Processing Pipeline a3a1b125bfb9c0246119c1e60d9f3f7a https://www.encodeproject.org/files/ENCFF258LRW/@@download/ENCFF258LRW.bigWig hg19 released ENCFF572VXK bed narrowPeak peaks ENCSR115SMW ChIP-seq EFO:0002067 K562 cell line Homo sapiens PKNOX1-human ENCAB000ATJ DNA False 2016-06-14 ENCODE 1 ENCFF394VWK, ENCFF581ZJL 7033899 ENCODE Processing Pipeline c0d6060bab366f6158b69de0f02afd5e https://www.encodeproject.org/files/ENCFF572VXK/@@download/ENCFF572VXK.bed.gz hg19 released ENCFF990JMV bigBed narrowPeak peaks ENCSR115SMW ChIP-seq EFO:0002067 K562 cell line Homo sapiens PKNOX1-human ENCAB000ATJ DNA False 2016-06-14 ENCODE 1 ENCFF572VXK 13314575 ENCODE Processing Pipeline 17c175b376dd33c716759f6f00c7b1cd https://www.encodeproject.org/files/ENCFF990JMV/@@download/ENCFF990JMV.bigBed hg19 released ENCFF172NFT bigWig fold change over control ENCSR115SMW ChIP-seq EFO:0002067 K562 cell line Homo sapiens PKNOX1-human ENCAB000ATJ DNA False 2016-06-14 ENCODE 1 ENCFF394VWK, ENCFF581ZJL 1254715253 ENCODE Processing Pipeline 834fad0ecd9758471e39296c88d9ca94 https://www.encodeproject.org/files/ENCFF172NFT/@@download/ENCFF172NFT.bigWig hg19 released ENCFF335XZE bigWig signal p-value ENCSR115SMW ChIP-seq EFO:0002067 K562 cell line Homo sapiens PKNOX1-human ENCAB000ATJ DNA False 2016-06-14 ENCODE 1, 2 ENCFF051LWI, ENCFF133FDG, ENCFF394VWK, ENCFF581ZJL 1850683098 ENCODE Processing Pipeline 280ac3dcccceb538ef677a8f96290741 https://www.encodeproject.org/files/ENCFF335XZE/@@download/ENCFF335XZE.bigWig hg19 released ENCFF964TUO bigBed narrowPeak peaks ENCSR115SMW ChIP-seq EFO:0002067 K562 cell line Homo sapiens PKNOX1-human ENCAB000ATJ DNA False 2016-06-14 ENCODE 2 ENCFF279KYF 13310723 ENCODE Processing Pipeline 4e9a8d5f797e5183ee1f70be25ccf37b https://www.encodeproject.org/files/ENCFF964TUO/@@download/ENCFF964TUO.bigBed hg19 released ENCFF279KYF bed narrowPeak peaks ENCSR115SMW ChIP-seq EFO:0002067 K562 cell line Homo sapiens PKNOX1-human ENCAB000ATJ DNA False 2016-06-14 ENCODE 2 ENCFF051LWI, ENCFF133FDG 7001273 ENCODE Processing Pipeline cd2c87ab7d899cbebf90812117c66479 https://www.encodeproject.org/files/ENCFF279KYF/@@download/ENCFF279KYF.bed.gz hg19 released ENCFF008HLI bigBed narrowPeak peaks ENCSR115SMW ChIP-seq EFO:0002067 K562 cell line Homo sapiens PKNOX1-human ENCAB000ATJ DNA False 2016-06-14 ENCODE 1, 2 ENCFF967UHQ 13104210 ENCODE Processing Pipeline c16e78fb5cc22f10136644b3fb02ed14 https://www.encodeproject.org/files/ENCFF008HLI/@@download/ENCFF008HLI.bigBed hg19 released ENCFF447PKF bigBed narrowPeak optimal idr thresholded peaks ENCSR115SMW ChIP-seq EFO:0002067 K562 cell line Homo sapiens PKNOX1-human ENCAB000ATJ DNA False 2016-06-14 ENCODE 1, 2 ENCFF544XKC 1683333 ENCODE Processing Pipeline aa3d7f691518c5bcff56fae66cb60130 https://www.encodeproject.org/files/ENCFF447PKF/@@download/ENCFF447PKF.bigBed hg19 released ENCFF853VOT bed narrowPeak conservative idr thresholded peaks ENCSR115SMW ChIP-seq EFO:0002067 K562 cell line Homo sapiens PKNOX1-human ENCAB000ATJ DNA False 2016-06-14 ENCODE 1, 2 ENCFF001TDO, ENCFF279KYF, ENCFF572VXK, ENCFF967UHQ 716202 ENCODE Processing Pipeline 97d24254d0413d7c4008e40697153a51 https://www.encodeproject.org/files/ENCFF853VOT/@@download/ENCFF853VOT.bed.gz hg19 released ENCFF401RVR bigBed narrowPeak conservative idr thresholded peaks ENCSR115SMW ChIP-seq EFO:0002067 K562 cell line Homo sapiens PKNOX1-human ENCAB000ATJ DNA False 2016-06-14 ENCODE 1, 2 ENCFF853VOT 1433666 ENCODE Processing Pipeline 2a271a57d5d2a09423347705c499feeb https://www.encodeproject.org/files/ENCFF401RVR/@@download/ENCFF401RVR.bigBed hg19 released ENCFF544XKC bed narrowPeak optimal idr thresholded peaks ENCSR115SMW ChIP-seq EFO:0002067 K562 cell line Homo sapiens PKNOX1-human ENCAB000ATJ DNA False 2016-06-14 ENCODE 1, 2 ENCFF001TDO, ENCFF279KYF, ENCFF572VXK, ENCFF967UHQ 884225 ENCODE Processing Pipeline 1be1447808c5db1b66e6c0b3f3cf0782 https://www.encodeproject.org/files/ENCFF544XKC/@@download/ENCFF544XKC.bed.gz hg19 released ENCFF967UHQ bed narrowPeak peaks ENCSR115SMW ChIP-seq EFO:0002067 K562 cell line Homo sapiens PKNOX1-human ENCAB000ATJ DNA False 2016-06-14 ENCODE 1, 2 ENCFF051LWI, ENCFF133FDG, ENCFF394VWK, ENCFF581ZJL 6994917 ENCODE Processing Pipeline 303f660256a14fa67dff0a4001f9a0e7 https://www.encodeproject.org/files/ENCFF967UHQ/@@download/ENCFF967UHQ.bed.gz hg19 released ENCFF310ZUA bam unfiltered alignments ENCSR106FRG ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAL1-human ENCAB012ZTC DNA False 2016-06-14 ENCODE 1 100 ENCFF145TXO, ENCFF793WFY, ENCFF807MUK 4546315209 ENCODE Processing Pipeline d730246e80b69127b708454ebd6c9b2f https://www.encodeproject.org/files/ENCFF310ZUA/@@download/ENCFF310ZUA.bam hg19 released mild to moderate bottlenecking ENCFF187DHE bam unfiltered alignments ENCSR106FRG ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAL1-human ENCAB012ZTC DNA False 2016-06-14 ENCODE 2 100 ENCFF768SQO, ENCFF807MUK, ENCFF998YDA 4550423085 ENCODE Processing Pipeline 8fac521595cc350955cd156ebc236670 https://www.encodeproject.org/files/ENCFF187DHE/@@download/ENCFF187DHE.bam hg19 released mild to moderate bottlenecking ENCFF145TXO fastq reads ENCSR106FRG ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAL1-human ENCAB012ZTC DNA False 2016-06-14 ENCODE 1 1 100 paired-ended 2 ENCFF793WFY 2140101678 Michael Snyder, Stanford dfe11503168adfdec3506459f75cdc2e SRA:SRR5111135 https://www.encodeproject.org/files/ENCFF145TXO/@@download/ENCFF145TXO.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFH/ released mild to moderate bottlenecking ENCFF768SQO fastq reads ENCSR106FRG ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAL1-human ENCAB012ZTC DNA False 2016-06-14 ENCODE 2 1 100 paired-ended 2 ENCFF998YDA 2171470736 Michael Snyder, Stanford 579adbea5ed9d050c5536c737967c74f SRA:SRR5111136 https://www.encodeproject.org/files/ENCFF768SQO/@@download/ENCFF768SQO.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFA/ released mild to moderate bottlenecking ENCFF998YDA fastq reads ENCSR106FRG ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAL1-human ENCAB012ZTC DNA False 2016-06-14 ENCODE 2 1 100 paired-ended 1 ENCFF768SQO 2119223034 Michael Snyder, Stanford 58da3268a0a894099760909c469edff2 SRA:SRR5111136 https://www.encodeproject.org/files/ENCFF998YDA/@@download/ENCFF998YDA.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFD/ released mild to moderate bottlenecking ENCFF793WFY fastq reads ENCSR106FRG ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAL1-human ENCAB012ZTC DNA False 2016-06-14 ENCODE 1 1 100 paired-ended 1 ENCFF145TXO 2109388797 Michael Snyder, Stanford c56e6e3079657100f3c18304878c387a SRA:SRR5111135 https://www.encodeproject.org/files/ENCFF793WFY/@@download/ENCFF793WFY.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFF/ released mild to moderate bottlenecking ENCFF389WLJ bam alignments ENCSR106FRG ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAL1-human ENCAB012ZTC DNA False 2016-06-14 ENCODE 1 100 ENCFF145TXO, ENCFF793WFY, ENCFF807MUK 3627302095 ENCODE Processing Pipeline fcb123f1d333645bc4d7beca10f74bfa https://www.encodeproject.org/files/ENCFF389WLJ/@@download/ENCFF389WLJ.bam hg19 released mild to moderate bottlenecking ENCFF341UEE bam alignments ENCSR106FRG ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAL1-human ENCAB012ZTC DNA False 2016-06-14 ENCODE 2 100 ENCFF768SQO, ENCFF807MUK, ENCFF998YDA 3762554628 ENCODE Processing Pipeline 8d41f97f617777e4f7b89a3f07c5ac96 https://www.encodeproject.org/files/ENCFF341UEE/@@download/ENCFF341UEE.bam hg19 released mild to moderate bottlenecking ENCFF238PAZ bigWig signal p-value ENCSR106FRG ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAL1-human ENCAB012ZTC DNA False 2016-06-14 ENCODE 1 ENCFF389WLJ, ENCFF581ZJL 1049843032 ENCODE Processing Pipeline 0d67a4373f6a0d6595b00c85418dd90f https://www.encodeproject.org/files/ENCFF238PAZ/@@download/ENCFF238PAZ.bigWig hg19 released mild to moderate bottlenecking ENCFF839APB bigWig signal p-value ENCSR106FRG ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAL1-human ENCAB012ZTC DNA False 2016-06-14 ENCODE 2 ENCFF051LWI, ENCFF341UEE 1021646894 ENCODE Processing Pipeline 1743f6114a66a50ceba824241941ca46 https://www.encodeproject.org/files/ENCFF839APB/@@download/ENCFF839APB.bigWig hg19 released mild to moderate bottlenecking ENCFF438KVV bigWig signal p-value ENCSR106FRG ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAL1-human ENCAB012ZTC DNA False 2016-06-14 ENCODE 1, 2 ENCFF051LWI, ENCFF341UEE, ENCFF389WLJ, ENCFF581ZJL 1844671966 ENCODE Processing Pipeline 6b9104a76d6d3f21602170f257d7cf9e https://www.encodeproject.org/files/ENCFF438KVV/@@download/ENCFF438KVV.bigWig hg19 released mild to moderate bottlenecking ENCFF370HGZ bigWig fold change over control ENCSR106FRG ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAL1-human ENCAB012ZTC DNA False 2016-06-14 ENCODE 2 ENCFF051LWI, ENCFF341UEE 1033997917 ENCODE Processing Pipeline d2aba3e54e401064360055320e64cbd5 https://www.encodeproject.org/files/ENCFF370HGZ/@@download/ENCFF370HGZ.bigWig hg19 released mild to moderate bottlenecking ENCFF359PRQ bigWig fold change over control ENCSR106FRG ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAL1-human ENCAB012ZTC DNA False 2016-06-14 ENCODE 1 ENCFF389WLJ, ENCFF581ZJL 1077677137 ENCODE Processing Pipeline fac537baa0e1390030a7e43b47731ffe https://www.encodeproject.org/files/ENCFF359PRQ/@@download/ENCFF359PRQ.bigWig hg19 released mild to moderate bottlenecking ENCFF617UEO bigWig fold change over control ENCSR106FRG ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAL1-human ENCAB012ZTC DNA False 2016-06-14 ENCODE 1, 2 ENCFF051LWI, ENCFF341UEE, ENCFF389WLJ, ENCFF581ZJL 1953372130 ENCODE Processing Pipeline 566ce0b5487586638304a7a68c656f25 https://www.encodeproject.org/files/ENCFF617UEO/@@download/ENCFF617UEO.bigWig hg19 released mild to moderate bottlenecking ENCFF793XCW bam unfiltered alignments ENCSR106FRG ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAL1-human ENCAB012ZTC DNA False 2016-06-14 ENCODE 2 100 ENCFF643CGH, ENCFF768SQO, ENCFF998YDA 4553090021 ENCODE Processing Pipeline 7bc9f48636572d30b014027b3f49a866 https://www.encodeproject.org/files/ENCFF793XCW/@@download/ENCFF793XCW.bam GRCh38 released mild to moderate bottlenecking ENCFF829RRK bam unfiltered alignments ENCSR106FRG ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAL1-human ENCAB012ZTC DNA False 2016-06-14 ENCODE 1 100 ENCFF145TXO, ENCFF643CGH, ENCFF793WFY 4549703394 ENCODE Processing Pipeline 4ad33653d19c7d74fdb6e050e2d2574e https://www.encodeproject.org/files/ENCFF829RRK/@@download/ENCFF829RRK.bam GRCh38 released mild to moderate bottlenecking ENCFF525CPA bam alignments ENCSR106FRG ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAL1-human ENCAB012ZTC DNA False 2016-06-14 ENCODE 2 100 ENCFF643CGH, ENCFF768SQO, ENCFF998YDA 3765084051 ENCODE Processing Pipeline 78ef28c0fb9c77ca9b765122a94a632f https://www.encodeproject.org/files/ENCFF525CPA/@@download/ENCFF525CPA.bam GRCh38 released mild to moderate bottlenecking ENCFF695TZQ bam alignments ENCSR106FRG ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAL1-human ENCAB012ZTC DNA False 2016-06-14 ENCODE 1 100 ENCFF145TXO, ENCFF643CGH, ENCFF793WFY 3629065324 ENCODE Processing Pipeline 50aaf44ca4c9e6cb87f3d748809d1c1b https://www.encodeproject.org/files/ENCFF695TZQ/@@download/ENCFF695TZQ.bam GRCh38 released mild to moderate bottlenecking ENCFF624LLK bigWig signal p-value ENCSR106FRG ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAL1-human ENCAB012ZTC DNA False 2016-06-14 ENCODE 1 ENCFF695TZQ, ENCFF910IKB 1048372836 ENCODE Processing Pipeline e734555dc25fa4f43229e365a1bfa887 https://www.encodeproject.org/files/ENCFF624LLK/@@download/ENCFF624LLK.bigWig GRCh38 released mild to moderate bottlenecking ENCFF259XLQ bigWig signal p-value ENCSR106FRG ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAL1-human ENCAB012ZTC DNA False 2016-06-14 ENCODE 2 ENCFF227IZS, ENCFF525CPA 894363869 ENCODE Processing Pipeline e10393df7669906a86827f9a13fecfe0 https://www.encodeproject.org/files/ENCFF259XLQ/@@download/ENCFF259XLQ.bigWig GRCh38 released mild to moderate bottlenecking ENCFF573DEO bigWig signal p-value ENCSR106FRG ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAL1-human ENCAB012ZTC DNA False 2016-06-14 ENCODE 1, 2 ENCFF227IZS, ENCFF525CPA, ENCFF695TZQ, ENCFF910IKB 1641671126 ENCODE Processing Pipeline 46ccbcb080115260eb39558f68f717fc https://www.encodeproject.org/files/ENCFF573DEO/@@download/ENCFF573DEO.bigWig GRCh38 released mild to moderate bottlenecking ENCFF397LEA bigWig fold change over control ENCSR106FRG ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAL1-human ENCAB012ZTC DNA False 2016-06-14 ENCODE 1 ENCFF695TZQ, ENCFF910IKB 1098514527 ENCODE Processing Pipeline 9a390b16eb71a7cc7018a18257f7b245 https://www.encodeproject.org/files/ENCFF397LEA/@@download/ENCFF397LEA.bigWig GRCh38 released mild to moderate bottlenecking ENCFF286BXD bigWig fold change over control ENCSR106FRG ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAL1-human ENCAB012ZTC DNA False 2016-06-14 ENCODE 2 ENCFF227IZS, ENCFF525CPA 1043121978 ENCODE Processing Pipeline 2d41260d5a2d54a2e43e0b8fe4ca3aec https://www.encodeproject.org/files/ENCFF286BXD/@@download/ENCFF286BXD.bigWig GRCh38 released mild to moderate bottlenecking ENCFF019EEM bigWig fold change over control ENCSR106FRG ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAL1-human ENCAB012ZTC DNA False 2016-06-14 ENCODE 1, 2 ENCFF227IZS, ENCFF525CPA, ENCFF695TZQ, ENCFF910IKB 1955028573 ENCODE Processing Pipeline 898fce6c056bb8a645cecc618201fff6 https://www.encodeproject.org/files/ENCFF019EEM/@@download/ENCFF019EEM.bigWig GRCh38 released mild to moderate bottlenecking ENCFF440AAA bed narrowPeak peaks ENCSR106FRG ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAL1-human ENCAB012ZTC DNA False 2016-06-14 ENCODE 1 ENCFF695TZQ, ENCFF910IKB 6578157 ENCODE Processing Pipeline a1889128d98db837709410a30eb86996 https://www.encodeproject.org/files/ENCFF440AAA/@@download/ENCFF440AAA.bed.gz GRCh38 released mild to moderate bottlenecking ENCFF992YKP bed narrowPeak peaks ENCSR106FRG ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAL1-human ENCAB012ZTC DNA False 2016-06-14 ENCODE 2 ENCFF227IZS, ENCFF525CPA 6541996 ENCODE Processing Pipeline db6221ae776c3ed906185381d4b7036d https://www.encodeproject.org/files/ENCFF992YKP/@@download/ENCFF992YKP.bed.gz GRCh38 released mild to moderate bottlenecking ENCFF717WWT bed narrowPeak peaks ENCSR106FRG ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAL1-human ENCAB012ZTC DNA False 2016-06-14 ENCODE 1, 2 ENCFF227IZS, ENCFF525CPA, ENCFF695TZQ, ENCFF910IKB 7160052 ENCODE Processing Pipeline 5aa9f46949978b816c0f32a06fa1539c https://www.encodeproject.org/files/ENCFF717WWT/@@download/ENCFF717WWT.bed.gz GRCh38 released mild to moderate bottlenecking ENCFF613OXL bigBed narrowPeak peaks ENCSR106FRG ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAL1-human ENCAB012ZTC DNA False 2016-06-14 ENCODE 1 ENCFF440AAA 13443233 ENCODE Processing Pipeline 55c4cb5fc07b98982041ebcbc01e99c1 https://www.encodeproject.org/files/ENCFF613OXL/@@download/ENCFF613OXL.bigBed GRCh38 released mild to moderate bottlenecking ENCFF123PYM bigBed narrowPeak peaks ENCSR106FRG ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAL1-human ENCAB012ZTC DNA False 2016-06-14 ENCODE 2 ENCFF992YKP 13452212 ENCODE Processing Pipeline 701c2693e8732d4d46339e033b23af83 https://www.encodeproject.org/files/ENCFF123PYM/@@download/ENCFF123PYM.bigBed GRCh38 released mild to moderate bottlenecking ENCFF250YLK bigBed narrowPeak peaks ENCSR106FRG ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAL1-human ENCAB012ZTC DNA False 2016-06-14 ENCODE 1, 2 ENCFF717WWT 13412233 ENCODE Processing Pipeline 45fcee2734af70584d0930de1ebfc7da https://www.encodeproject.org/files/ENCFF250YLK/@@download/ENCFF250YLK.bigBed GRCh38 released mild to moderate bottlenecking ENCFF412EVD bed narrowPeak conservative idr thresholded peaks ENCSR106FRG ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAL1-human ENCAB012ZTC DNA False 2016-06-14 ENCODE 1, 2 ENCFF419RSJ, ENCFF440AAA, ENCFF717WWT, ENCFF992YKP 402895 ENCODE Processing Pipeline 7c7740c265c0e8c3f8717c79afaf8e3d https://www.encodeproject.org/files/ENCFF412EVD/@@download/ENCFF412EVD.bed.gz GRCh38 released mild to moderate bottlenecking ENCFF410IFP bigBed narrowPeak conservative idr thresholded peaks ENCSR106FRG ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAL1-human ENCAB012ZTC DNA False 2016-06-14 ENCODE 1, 2 ENCFF412EVD 749987 ENCODE Processing Pipeline 126241f6eabbb0d9bd0abfeaff166130 https://www.encodeproject.org/files/ENCFF410IFP/@@download/ENCFF410IFP.bigBed GRCh38 released mild to moderate bottlenecking ENCFF475LFH bed narrowPeak optimal idr thresholded peaks ENCSR106FRG ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAL1-human ENCAB012ZTC DNA False 2016-06-14 ENCODE 1, 2 ENCFF419RSJ, ENCFF440AAA, ENCFF717WWT, ENCFF992YKP 501763 ENCODE Processing Pipeline 57a4f9c69022e7387283f16da692f152 https://www.encodeproject.org/files/ENCFF475LFH/@@download/ENCFF475LFH.bed.gz GRCh38 released mild to moderate bottlenecking ENCFF016VHT bigBed narrowPeak optimal idr thresholded peaks ENCSR106FRG ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAL1-human ENCAB012ZTC DNA False 2016-06-14 ENCODE 1, 2 ENCFF475LFH 884056 ENCODE Processing Pipeline d14a053dde0bb38534de719af2cc2407 https://www.encodeproject.org/files/ENCFF016VHT/@@download/ENCFF016VHT.bigBed GRCh38 released mild to moderate bottlenecking ENCFF106RGY bed narrowPeak peaks ENCSR106FRG ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAL1-human ENCAB012ZTC DNA False 2016-06-14 ENCODE 2 ENCFF051LWI, ENCFF341UEE 6541828 ENCODE Processing Pipeline e6f5f66dd80e240ea9a45a7df2ae5940 https://www.encodeproject.org/files/ENCFF106RGY/@@download/ENCFF106RGY.bed.gz hg19 released mild to moderate bottlenecking ENCFF435YKY bed narrowPeak peaks ENCSR106FRG ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAL1-human ENCAB012ZTC DNA False 2016-06-14 ENCODE 1, 2 ENCFF051LWI, ENCFF341UEE, ENCFF389WLJ, ENCFF581ZJL 7138907 ENCODE Processing Pipeline ff67e223112fba5e51c5d05cf2e602ef https://www.encodeproject.org/files/ENCFF435YKY/@@download/ENCFF435YKY.bed.gz hg19 released mild to moderate bottlenecking ENCFF661CJD bed narrowPeak conservative idr thresholded peaks ENCSR106FRG ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAL1-human ENCAB012ZTC DNA False 2016-06-14 ENCODE 1, 2 ENCFF001TDO, ENCFF106RGY, ENCFF435YKY, ENCFF808YAS 395733 ENCODE Processing Pipeline 575cd73c45f4d212b331865809bcc149 https://www.encodeproject.org/files/ENCFF661CJD/@@download/ENCFF661CJD.bed.gz hg19 released mild to moderate bottlenecking ENCFF051RKU bigBed narrowPeak peaks ENCSR106FRG ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAL1-human ENCAB012ZTC DNA False 2016-06-14 ENCODE 1 ENCFF808YAS 13444709 ENCODE Processing Pipeline efcafc33cb7e60ee814b13c04672714b https://www.encodeproject.org/files/ENCFF051RKU/@@download/ENCFF051RKU.bigBed hg19 released mild to moderate bottlenecking ENCFF808YAS bed narrowPeak peaks ENCSR106FRG ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAL1-human ENCAB012ZTC DNA False 2016-06-14 ENCODE 1 ENCFF389WLJ, ENCFF581ZJL 6588440 ENCODE Processing Pipeline b7d7d11be5c02c6de486c7485eeaf585 https://www.encodeproject.org/files/ENCFF808YAS/@@download/ENCFF808YAS.bed.gz hg19 released mild to moderate bottlenecking ENCFF384QCN bigBed narrowPeak peaks ENCSR106FRG ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAL1-human ENCAB012ZTC DNA False 2016-06-14 ENCODE 2 ENCFF106RGY 13491494 ENCODE Processing Pipeline cd50cccc28060a377ebdcd1c2822423f https://www.encodeproject.org/files/ENCFF384QCN/@@download/ENCFF384QCN.bigBed hg19 released mild to moderate bottlenecking ENCFF902IJP bigBed narrowPeak optimal idr thresholded peaks ENCSR106FRG ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAL1-human ENCAB012ZTC DNA False 2016-06-14 ENCODE 1, 2 ENCFF284LRP 867948 ENCODE Processing Pipeline fb9777347e15e3f0af383905943faaba https://www.encodeproject.org/files/ENCFF902IJP/@@download/ENCFF902IJP.bigBed hg19 released mild to moderate bottlenecking ENCFF186YFH bigBed narrowPeak conservative idr thresholded peaks ENCSR106FRG ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAL1-human ENCAB012ZTC DNA False 2016-06-14 ENCODE 1, 2 ENCFF661CJD 737817 ENCODE Processing Pipeline 5580dda37513e26bc09f9897e8a6fabd https://www.encodeproject.org/files/ENCFF186YFH/@@download/ENCFF186YFH.bigBed hg19 released mild to moderate bottlenecking ENCFF928UEE bigBed narrowPeak peaks ENCSR106FRG ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAL1-human ENCAB012ZTC DNA False 2016-06-14 ENCODE 1, 2 ENCFF435YKY 13378036 ENCODE Processing Pipeline 9c4d3a8248e7abca2a3f092b79e87a7c https://www.encodeproject.org/files/ENCFF928UEE/@@download/ENCFF928UEE.bigBed hg19 released mild to moderate bottlenecking ENCFF284LRP bed narrowPeak optimal idr thresholded peaks ENCSR106FRG ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAL1-human ENCAB012ZTC DNA False 2016-06-14 ENCODE 1, 2 ENCFF001TDO, ENCFF106RGY, ENCFF435YKY, ENCFF808YAS 490842 ENCODE Processing Pipeline 3c526cb3b4923a306e8fa5fbc8fc4dd0 https://www.encodeproject.org/files/ENCFF284LRP/@@download/ENCFF284LRP.bed.gz hg19 released mild to moderate bottlenecking ENCFF178ZJY fastq reads ENCSR836COE ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM17-human ENCAB959TNR DNA SDS formaldehyde False 2017-08-17 ENCODE 1 1 40 single-ended 489585792 Xiang-Dong Fu, UCSD bc37661b1e6f8bb9526aab24560f8ba5 SRA:SRR6214099 https://www.encodeproject.org/files/ENCFF178ZJY/@@download/ENCFF178ZJY.fastq.gz Illumina HiSeq 2000 /files/ENCFF577LLL/ released low read depth, mild to moderate bottlenecking, low read length ENCFF614UID fastq reads ENCSR836COE ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM17-human ENCAB959TNR DNA SDS formaldehyde False 2017-08-17 ENCODE 2 1 40 single-ended 497327408 Xiang-Dong Fu, UCSD 17d462c367ac14c63b540922530f427a SRA:SRR6214098 https://www.encodeproject.org/files/ENCFF614UID/@@download/ENCFF614UID.fastq.gz Illumina HiSeq 2000 /files/ENCFF363JFD/ released low read depth, mild to moderate bottlenecking, low read length ENCFF007CIX bam alignments ENCSR836COE ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM17-human ENCAB959TNR DNA SDS formaldehyde False 2017-08-17 ENCODE 2 ENCFF614UID, ENCFF807MUK 414952611 ENCODE Processing Pipeline ac1547844dd566444921eb7003201f74 https://www.encodeproject.org/files/ENCFF007CIX/@@download/ENCFF007CIX.bam hg19 released low read depth, mild to moderate bottlenecking, low read length ENCFF923FKY bam alignments ENCSR836COE ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM17-human ENCAB959TNR DNA SDS formaldehyde False 2017-08-17 ENCODE 1 ENCFF178ZJY, ENCFF807MUK 455234119 ENCODE Processing Pipeline d9a7b1e4ec18993b68dc8f99a8e35487 https://www.encodeproject.org/files/ENCFF923FKY/@@download/ENCFF923FKY.bam hg19 released low read depth, mild to moderate bottlenecking, low read length ENCFF079CXP bam unfiltered alignments ENCSR836COE ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM17-human ENCAB959TNR DNA SDS formaldehyde False 2017-08-17 ENCODE 1 ENCFF178ZJY, ENCFF643CGH 688421298 ENCODE Processing Pipeline eb2251d295a11b94d4d4dea4c4d3dd1f https://www.encodeproject.org/files/ENCFF079CXP/@@download/ENCFF079CXP.bam GRCh38 released low read depth, mild to moderate bottlenecking, low read length ENCFF681ZXP bam unfiltered alignments ENCSR836COE ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM17-human ENCAB959TNR DNA SDS formaldehyde False 2017-08-17 ENCODE 2 ENCFF614UID, ENCFF643CGH 679852590 ENCODE Processing Pipeline 921e46cbe46dcb20683128c3ce295aad https://www.encodeproject.org/files/ENCFF681ZXP/@@download/ENCFF681ZXP.bam GRCh38 released low read depth, mild to moderate bottlenecking, low read length ENCFF049VYL bam alignments ENCSR836COE ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM17-human ENCAB959TNR DNA SDS formaldehyde False 2017-08-17 ENCODE 1 ENCFF178ZJY, ENCFF643CGH 454782666 ENCODE Processing Pipeline eced607a4f91ef6c7d1ba70ad9000605 https://www.encodeproject.org/files/ENCFF049VYL/@@download/ENCFF049VYL.bam GRCh38 released low read depth, mild to moderate bottlenecking, low read length ENCFF581TTB bam alignments ENCSR836COE ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM17-human ENCAB959TNR DNA SDS formaldehyde False 2017-08-17 ENCODE 2 ENCFF614UID, ENCFF643CGH 414495631 ENCODE Processing Pipeline fafb0efedf37f4325be539f7b99b1e1e https://www.encodeproject.org/files/ENCFF581TTB/@@download/ENCFF581TTB.bam GRCh38 released low read depth, mild to moderate bottlenecking, low read length ENCFF464HBI bigWig signal p-value ENCSR836COE ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM17-human ENCAB959TNR DNA SDS formaldehyde False 2017-08-17 ENCODE 1, 2 ENCFF007CIX, ENCFF493QSH, ENCFF641CEP, ENCFF923FKY 1050182465 ENCODE Processing Pipeline a60424a09887cee9e921e8b2735fdc8e https://www.encodeproject.org/files/ENCFF464HBI/@@download/ENCFF464HBI.bigWig hg19 released low read depth, mild to moderate bottlenecking, low read length ENCFF590AZG bed narrowPeak peaks ENCSR836COE ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM17-human ENCAB959TNR DNA SDS formaldehyde False 2017-08-17 ENCODE 1 ENCFF493QSH, ENCFF923FKY 4878142 ENCODE Processing Pipeline 0107c937fd98ed8c82df77d05100ce01 https://www.encodeproject.org/files/ENCFF590AZG/@@download/ENCFF590AZG.bed.gz hg19 released low read depth, mild to moderate bottlenecking, low read length ENCFF413TAL bigBed narrowPeak peaks ENCSR836COE ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM17-human ENCAB959TNR DNA SDS formaldehyde False 2017-08-17 ENCODE 1, 2 ENCFF234WHY 13404309 ENCODE Processing Pipeline f72461d82ed0cc60b073b1ce523b6e1a https://www.encodeproject.org/files/ENCFF413TAL/@@download/ENCFF413TAL.bigBed hg19 released low read depth, mild to moderate bottlenecking, low read length ENCFF801PMI bigWig fold change over control ENCSR836COE ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM17-human ENCAB959TNR DNA SDS formaldehyde False 2017-08-17 ENCODE 1 ENCFF049VYL, ENCFF120YSP 349707873 ENCODE Processing Pipeline 8f351e5b03467109bc4f2014365b5d68 https://www.encodeproject.org/files/ENCFF801PMI/@@download/ENCFF801PMI.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, low read length ENCFF437FGC bigWig signal p-value ENCSR836COE ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM17-human ENCAB959TNR DNA SDS formaldehyde False 2017-08-17 ENCODE 1 ENCFF493QSH, ENCFF923FKY 544603058 ENCODE Processing Pipeline 795975d68276e0d9415108a72bca1b64 https://www.encodeproject.org/files/ENCFF437FGC/@@download/ENCFF437FGC.bigWig hg19 released low read depth, mild to moderate bottlenecking, low read length ENCFF135QBU bigWig signal p-value ENCSR836COE ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM17-human ENCAB959TNR DNA SDS formaldehyde False 2017-08-17 ENCODE 2 ENCFF007CIX, ENCFF641CEP 685471332 ENCODE Processing Pipeline 6433b6ea726abbfc617f0d739a7b3259 https://www.encodeproject.org/files/ENCFF135QBU/@@download/ENCFF135QBU.bigWig hg19 released low read depth, mild to moderate bottlenecking, low read length ENCFF130KQG bigWig fold change over control ENCSR836COE ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM17-human ENCAB959TNR DNA SDS formaldehyde False 2017-08-17 ENCODE 1, 2 ENCFF007CIX, ENCFF493QSH, ENCFF641CEP, ENCFF923FKY 851612102 ENCODE Processing Pipeline e6ed5ec08c4aace889411cf66aaaccf1 https://www.encodeproject.org/files/ENCFF130KQG/@@download/ENCFF130KQG.bigWig hg19 released low read depth, mild to moderate bottlenecking, low read length ENCFF025UGN bigBed narrowPeak peaks ENCSR836COE ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM17-human ENCAB959TNR DNA SDS formaldehyde False 2017-08-17 ENCODE 2 ENCFF625VEV 10774550 ENCODE Processing Pipeline b0f4dc3d12d56b646a62735756c2785c https://www.encodeproject.org/files/ENCFF025UGN/@@download/ENCFF025UGN.bigBed hg19 released low read depth, mild to moderate bottlenecking, low read length ENCFF346GSJ bigBed narrowPeak conservative idr thresholded peaks ENCSR836COE ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM17-human ENCAB959TNR DNA SDS formaldehyde False 2017-08-17 ENCODE 1, 2 ENCFF104JXU 74554 ENCODE Processing Pipeline 232059d968228facf0a130bcbeb128d1 https://www.encodeproject.org/files/ENCFF346GSJ/@@download/ENCFF346GSJ.bigBed hg19 released low read depth, mild to moderate bottlenecking, low read length ENCFF861YKK bed narrowPeak optimal idr thresholded peaks ENCSR836COE ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM17-human ENCAB959TNR DNA SDS formaldehyde False 2017-08-17 ENCODE 1, 2 ENCFF001TDO, ENCFF234WHY, ENCFF590AZG, ENCFF625VEV 995 ENCODE Processing Pipeline 3ee133fba8a90d83577284278886088e https://www.encodeproject.org/files/ENCFF861YKK/@@download/ENCFF861YKK.bed.gz hg19 released low read depth, mild to moderate bottlenecking, low read length ENCFF866HHT bigWig fold change over control ENCSR836COE ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM17-human ENCAB959TNR DNA SDS formaldehyde False 2017-08-17 ENCODE 2 ENCFF581TTB, ENCFF906SAI 356951721 ENCODE Processing Pipeline d41f318d79356574b9c825c3e647e633 https://www.encodeproject.org/files/ENCFF866HHT/@@download/ENCFF866HHT.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, low read length ENCFF616ZKA bed narrowPeak peaks ENCSR836COE ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM17-human ENCAB959TNR DNA SDS formaldehyde False 2017-08-17 ENCODE 2 ENCFF581TTB, ENCFF906SAI 5047062 ENCODE Processing Pipeline 533d6a822db6ca4108913571c97cbe32 https://www.encodeproject.org/files/ENCFF616ZKA/@@download/ENCFF616ZKA.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, low read length ENCFF797STR bed narrowPeak peaks ENCSR836COE ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM17-human ENCAB959TNR DNA SDS formaldehyde False 2017-08-17 ENCODE 1, 2 ENCFF049VYL, ENCFF120YSP, ENCFF581TTB, ENCFF906SAI 6258160 ENCODE Processing Pipeline 41a5b78580d839da9186050b868db05f https://www.encodeproject.org/files/ENCFF797STR/@@download/ENCFF797STR.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, low read length ENCFF431GUT bigBed narrowPeak optimal idr thresholded peaks ENCSR836COE ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM17-human ENCAB959TNR DNA SDS formaldehyde False 2017-08-17 ENCODE 1, 2 ENCFF861YKK 75577 ENCODE Processing Pipeline 559284f5522302310672d33241950982 https://www.encodeproject.org/files/ENCFF431GUT/@@download/ENCFF431GUT.bigBed hg19 released low read depth, mild to moderate bottlenecking, low read length ENCFF316VCK bed narrowPeak peaks ENCSR836COE ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM17-human ENCAB959TNR DNA SDS formaldehyde False 2017-08-17 ENCODE 1 ENCFF049VYL, ENCFF120YSP 4949355 ENCODE Processing Pipeline 8d867ecc6c4db07b494f05aef4da0849 https://www.encodeproject.org/files/ENCFF316VCK/@@download/ENCFF316VCK.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, low read length ENCFF790TCC bigBed narrowPeak peaks ENCSR836COE ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM17-human ENCAB959TNR DNA SDS formaldehyde False 2017-08-17 ENCODE 1 ENCFF316VCK 10989768 ENCODE Processing Pipeline 788f75cafd947b62cfac456be16fa19c https://www.encodeproject.org/files/ENCFF790TCC/@@download/ENCFF790TCC.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, low read length ENCFF398FQP bigBed narrowPeak peaks ENCSR836COE ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM17-human ENCAB959TNR DNA SDS formaldehyde False 2017-08-17 ENCODE 2 ENCFF616ZKA 10967732 ENCODE Processing Pipeline ae5785c5eecc897331b6a68b121b9295 https://www.encodeproject.org/files/ENCFF398FQP/@@download/ENCFF398FQP.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, low read length ENCFF022MND bigBed narrowPeak peaks ENCSR836COE ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM17-human ENCAB959TNR DNA SDS formaldehyde False 2017-08-17 ENCODE 1, 2 ENCFF797STR 13431926 ENCODE Processing Pipeline 052f2d0e51b0ac5e6a63e8bcbf6038f7 https://www.encodeproject.org/files/ENCFF022MND/@@download/ENCFF022MND.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, low read length ENCFF520UWX bigWig fold change over control ENCSR836COE ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM17-human ENCAB959TNR DNA SDS formaldehyde False 2017-08-17 ENCODE 1 ENCFF493QSH, ENCFF923FKY 350017087 ENCODE Processing Pipeline 78e79310673ce2751416dc003aba6705 https://www.encodeproject.org/files/ENCFF520UWX/@@download/ENCFF520UWX.bigWig hg19 released low read depth, mild to moderate bottlenecking, low read length ENCFF406PFO bigWig fold change over control ENCSR836COE ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM17-human ENCAB959TNR DNA SDS formaldehyde False 2017-08-17 ENCODE 2 ENCFF007CIX, ENCFF641CEP 358736428 ENCODE Processing Pipeline cd8d349554ef06452cbefe7b0e57a42a https://www.encodeproject.org/files/ENCFF406PFO/@@download/ENCFF406PFO.bigWig hg19 released low read depth, mild to moderate bottlenecking, low read length ENCFF625VEV bed narrowPeak peaks ENCSR836COE ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM17-human ENCAB959TNR DNA SDS formaldehyde False 2017-08-17 ENCODE 2 ENCFF007CIX, ENCFF641CEP 4967083 ENCODE Processing Pipeline 757d5f0a5458cf6810ed9912b8eec445 https://www.encodeproject.org/files/ENCFF625VEV/@@download/ENCFF625VEV.bed.gz hg19 released low read depth, mild to moderate bottlenecking, low read length ENCFF234WHY bed narrowPeak peaks ENCSR836COE ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM17-human ENCAB959TNR DNA SDS formaldehyde False 2017-08-17 ENCODE 1, 2 ENCFF007CIX, ENCFF493QSH, ENCFF641CEP, ENCFF923FKY 6361662 ENCODE Processing Pipeline 42fc9246aa17eb0ca09b9bd9b1b13402 https://www.encodeproject.org/files/ENCFF234WHY/@@download/ENCFF234WHY.bed.gz hg19 released low read depth, mild to moderate bottlenecking, low read length ENCFF398YTL bigBed narrowPeak peaks ENCSR836COE ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM17-human ENCAB959TNR DNA SDS formaldehyde False 2017-08-17 ENCODE 1 ENCFF590AZG 10798934 ENCODE Processing Pipeline 8fa0c2bbe6091dc1010ae05436935288 https://www.encodeproject.org/files/ENCFF398YTL/@@download/ENCFF398YTL.bigBed hg19 released low read depth, mild to moderate bottlenecking, low read length ENCFF495HMK bigWig signal p-value ENCSR836COE ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM17-human ENCAB959TNR DNA SDS formaldehyde False 2017-08-17 ENCODE 1 ENCFF049VYL, ENCFF120YSP 606013889 ENCODE Processing Pipeline 16eb3343d00eba055b34ae7376ba260b https://www.encodeproject.org/files/ENCFF495HMK/@@download/ENCFF495HMK.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, low read length ENCFF881EBR bigWig signal p-value ENCSR836COE ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM17-human ENCAB959TNR DNA SDS formaldehyde False 2017-08-17 ENCODE 2 ENCFF581TTB, ENCFF906SAI 604970716 ENCODE Processing Pipeline 98a606413f1a967f0d22f0a8bb64ff8d https://www.encodeproject.org/files/ENCFF881EBR/@@download/ENCFF881EBR.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, low read length ENCFF937WPQ bigWig fold change over control ENCSR836COE ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM17-human ENCAB959TNR DNA SDS formaldehyde False 2017-08-17 ENCODE 1, 2 ENCFF049VYL, ENCFF120YSP, ENCFF581TTB, ENCFF906SAI 845456971 ENCODE Processing Pipeline bacd7d1dcc374250d06575abcbace06e https://www.encodeproject.org/files/ENCFF937WPQ/@@download/ENCFF937WPQ.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, low read length ENCFF763SRM bed narrowPeak conservative idr thresholded peaks ENCSR836COE ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM17-human ENCAB959TNR DNA SDS formaldehyde False 2017-08-17 ENCODE 1, 2 ENCFF316VCK, ENCFF419RSJ, ENCFF616ZKA, ENCFF797STR 799 ENCODE Processing Pipeline 8b0fb16d35e8efec1c1e0c0091f8ba09 https://www.encodeproject.org/files/ENCFF763SRM/@@download/ENCFF763SRM.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, low read length ENCFF104JXU bed narrowPeak conservative idr thresholded peaks ENCSR836COE ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM17-human ENCAB959TNR DNA SDS formaldehyde False 2017-08-17 ENCODE 1, 2 ENCFF001TDO, ENCFF234WHY, ENCFF590AZG, ENCFF625VEV 839 ENCODE Processing Pipeline 06dee73f89532d67b8db4444d9e2399e https://www.encodeproject.org/files/ENCFF104JXU/@@download/ENCFF104JXU.bed.gz hg19 released low read depth, mild to moderate bottlenecking, low read length ENCFF042IKH bigWig signal p-value ENCSR836COE ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM17-human ENCAB959TNR DNA SDS formaldehyde False 2017-08-17 ENCODE 1, 2 ENCFF049VYL, ENCFF120YSP, ENCFF581TTB, ENCFF906SAI 1206856875 ENCODE Processing Pipeline 66b74b73f9f85d9eed45797505e6355a https://www.encodeproject.org/files/ENCFF042IKH/@@download/ENCFF042IKH.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, low read length ENCFF280CPG bigBed narrowPeak conservative idr thresholded peaks ENCSR836COE ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM17-human ENCAB959TNR DNA SDS formaldehyde False 2017-08-17 ENCODE 1, 2 ENCFF763SRM 74909 ENCODE Processing Pipeline 917ac53dbb79d10fd4490cca1dad0b1c https://www.encodeproject.org/files/ENCFF280CPG/@@download/ENCFF280CPG.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, low read length ENCFF056OIG bed narrowPeak optimal idr thresholded peaks ENCSR836COE ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM17-human ENCAB959TNR DNA SDS formaldehyde False 2017-08-17 ENCODE 1, 2 ENCFF316VCK, ENCFF419RSJ, ENCFF616ZKA, ENCFF797STR 1140 ENCODE Processing Pipeline 22a5eafca87a39e5acee380bca87a5f4 https://www.encodeproject.org/files/ENCFF056OIG/@@download/ENCFF056OIG.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, low read length ENCFF869TLE bigBed narrowPeak optimal idr thresholded peaks ENCSR836COE ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM17-human ENCAB959TNR DNA SDS formaldehyde False 2017-08-17 ENCODE 1, 2 ENCFF056OIG 30347 ENCODE Processing Pipeline 29324e9118d2f4df53a472d3799741fe https://www.encodeproject.org/files/ENCFF869TLE/@@download/ENCFF869TLE.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, low read length ENCFF637NQL bam unfiltered alignments ENCSR836COE ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM17-human ENCAB959TNR DNA SDS formaldehyde False 2017-08-17 ENCODE 1 40 ENCFF178ZJY, ENCFF807MUK 685428253 ENCODE Processing Pipeline 5b322a8056f86d263d09fff7e7144346 https://www.encodeproject.org/files/ENCFF637NQL/@@download/ENCFF637NQL.bam hg19 released low read depth, mild to moderate bottlenecking, low read length ENCFF947CCP bam unfiltered alignments ENCSR836COE ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM17-human ENCAB959TNR DNA SDS formaldehyde False 2017-08-17 ENCODE 2 40 ENCFF614UID, ENCFF807MUK 677166759 ENCODE Processing Pipeline be0270da2d372118bd6471f4ac945873 https://www.encodeproject.org/files/ENCFF947CCP/@@download/ENCFF947CCP.bam hg19 released low read depth, mild to moderate bottlenecking, low read length ENCFF201YVQ bam unfiltered alignments ENCSR633EIC ChIP-seq EFO:0002067 K562 cell line Homo sapiens FLAG-PBX2-human ENCAB697XQW DNA False 2016-06-14 ENCODE 2 50 ENCFF526NYU, ENCFF807MUK 936774233 ENCODE Processing Pipeline 7ce9c5504d42b8ed5d37270c1de56c6b https://www.encodeproject.org/files/ENCFF201YVQ/@@download/ENCFF201YVQ.bam hg19 released missing genetic modification characterization, low read depth characterization(s) pending review ENCFF830KJF bam unfiltered alignments ENCSR633EIC ChIP-seq EFO:0002067 K562 cell line Homo sapiens FLAG-PBX2-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1 50 ENCFF253ROA, ENCFF807MUK 1518278067 ENCODE Processing Pipeline c748612cdbc3032c45ffb70bc1e31029 https://www.encodeproject.org/files/ENCFF830KJF/@@download/ENCFF830KJF.bam hg19 released missing genetic modification characterization, low read depth characterization(s) pending review ENCFF526NYU fastq reads ENCSR633EIC ChIP-seq EFO:0002067 K562 cell line Homo sapiens FLAG-PBX2-human ENCAB697XQW DNA False 2016-06-14 ENCODE 2 1 50 single-ended 821717038 Richard Myers, HAIB 3d1ec6cbcff12cfff941ed18ba9994ae SRA:SRR5339030 https://www.encodeproject.org/files/ENCFF526NYU/@@download/ENCFF526NYU.fastq.gz Illumina HiSeq 2000 /files/ENCFF001RVO/ released missing genetic modification characterization, low read depth characterization(s) pending review ENCFF253ROA fastq reads ENCSR633EIC ChIP-seq EFO:0002067 K562 cell line Homo sapiens FLAG-PBX2-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1 1 50 single-ended 1328930452 Richard Myers, HAIB c6fb963d2ea446b39f5115046cd28574 SRA:SRR5339031 https://www.encodeproject.org/files/ENCFF253ROA/@@download/ENCFF253ROA.fastq.gz Illumina HiSeq 2000 /files/ENCFF001RVO/ released missing genetic modification characterization, low read depth characterization(s) pending review ENCFF232RDZ bam alignments ENCSR633EIC ChIP-seq EFO:0002067 K562 cell line Homo sapiens FLAG-PBX2-human ENCAB697XQW DNA False 2016-06-14 ENCODE 2 ENCFF526NYU, ENCFF807MUK 708606305 ENCODE Processing Pipeline a8801a4f86ee0491ca7f22c5ff3d827a https://www.encodeproject.org/files/ENCFF232RDZ/@@download/ENCFF232RDZ.bam hg19 released missing genetic modification characterization, low read depth characterization(s) pending review ENCFF907MUS bam alignments ENCSR633EIC ChIP-seq EFO:0002067 K562 cell line Homo sapiens FLAG-PBX2-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1 ENCFF253ROA, ENCFF807MUK 1153891348 ENCODE Processing Pipeline ab542e8c689b5b7df112acd2c3603594 https://www.encodeproject.org/files/ENCFF907MUS/@@download/ENCFF907MUS.bam hg19 released missing genetic modification characterization, low read depth characterization(s) pending review ENCFF990SCZ bigWig signal p-value ENCSR633EIC ChIP-seq EFO:0002067 K562 cell line Homo sapiens FLAG-PBX2-human ENCAB697XQW DNA False 2016-06-14 ENCODE 2 ENCFF061QOJ, ENCFF232RDZ 786005173 ENCODE Processing Pipeline 508dfe754a397b6da35f33561b27f984 https://www.encodeproject.org/files/ENCFF990SCZ/@@download/ENCFF990SCZ.bigWig hg19 released missing genetic modification characterization, low read depth characterization(s) pending review ENCFF731VSK bigWig signal p-value ENCSR633EIC ChIP-seq EFO:0002067 K562 cell line Homo sapiens FLAG-PBX2-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1 ENCFF061QOJ, ENCFF907MUS 779647413 ENCODE Processing Pipeline b79e594b2529cc697952ccfb0fe79e2a https://www.encodeproject.org/files/ENCFF731VSK/@@download/ENCFF731VSK.bigWig hg19 released missing genetic modification characterization, low read depth characterization(s) pending review ENCFF218GXY bigWig signal p-value ENCSR633EIC ChIP-seq EFO:0002067 K562 cell line Homo sapiens FLAG-PBX2-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF061QOJ, ENCFF232RDZ, ENCFF907MUS 874640687 ENCODE Processing Pipeline 1b9fc0f3616bf0596bceeeb94367bcd1 https://www.encodeproject.org/files/ENCFF218GXY/@@download/ENCFF218GXY.bigWig hg19 released missing genetic modification characterization, low read depth characterization(s) pending review ENCFF916PYQ bigWig fold change over control ENCSR633EIC ChIP-seq EFO:0002067 K562 cell line Homo sapiens FLAG-PBX2-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1 ENCFF061QOJ, ENCFF907MUS 662302222 ENCODE Processing Pipeline 7a560024b079bdb59b0fc486610607bb https://www.encodeproject.org/files/ENCFF916PYQ/@@download/ENCFF916PYQ.bigWig hg19 released missing genetic modification characterization, low read depth characterization(s) pending review ENCFF203KTC bigWig fold change over control ENCSR633EIC ChIP-seq EFO:0002067 K562 cell line Homo sapiens FLAG-PBX2-human ENCAB697XQW DNA False 2016-06-14 ENCODE 2 ENCFF061QOJ, ENCFF232RDZ 532405781 ENCODE Processing Pipeline 23d3fb0b921e670afdf8a41f77e0e0f4 https://www.encodeproject.org/files/ENCFF203KTC/@@download/ENCFF203KTC.bigWig hg19 released missing genetic modification characterization, low read depth characterization(s) pending review ENCFF021SXQ bigWig fold change over control ENCSR633EIC ChIP-seq EFO:0002067 K562 cell line Homo sapiens FLAG-PBX2-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF061QOJ, ENCFF232RDZ, ENCFF907MUS 963354845 ENCODE Processing Pipeline f9d15936d35339c8893d6a99a4cef2cf https://www.encodeproject.org/files/ENCFF021SXQ/@@download/ENCFF021SXQ.bigWig hg19 released missing genetic modification characterization, low read depth characterization(s) pending review ENCFF590NKV bigBed narrowPeak peaks ENCSR633EIC ChIP-seq EFO:0002067 K562 cell line Homo sapiens FLAG-PBX2-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF597QZY 11630107 ENCODE Processing Pipeline 0ba46d45111c61a830d5e44a572fc09f https://www.encodeproject.org/files/ENCFF590NKV/@@download/ENCFF590NKV.bigBed hg19 released missing genetic modification characterization, low read depth characterization(s) pending review ENCFF597QZY bed narrowPeak peaks ENCSR633EIC ChIP-seq EFO:0002067 K562 cell line Homo sapiens FLAG-PBX2-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF061QOJ, ENCFF232RDZ, ENCFF907MUS 5919643 ENCODE Processing Pipeline 5663b0730a149ef14f905bc402ced55b https://www.encodeproject.org/files/ENCFF597QZY/@@download/ENCFF597QZY.bed.gz hg19 released missing genetic modification characterization, low read depth characterization(s) pending review ENCFF003PSH bed narrowPeak conservative idr thresholded peaks ENCSR633EIC ChIP-seq EFO:0002067 K562 cell line Homo sapiens FLAG-PBX2-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF001TDO, ENCFF539OHR, ENCFF597QZY, ENCFF906WAQ 70177 ENCODE Processing Pipeline fe52b915cd3c6bdc7a54add5484f1b6d https://www.encodeproject.org/files/ENCFF003PSH/@@download/ENCFF003PSH.bed.gz hg19 released missing genetic modification characterization, low read depth characterization(s) pending review ENCFF624QDF bigBed narrowPeak conservative idr thresholded peaks ENCSR633EIC ChIP-seq EFO:0002067 K562 cell line Homo sapiens FLAG-PBX2-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF003PSH 183011 ENCODE Processing Pipeline aa7a849ea6e2fea96cc2e8b6e4a2ac66 https://www.encodeproject.org/files/ENCFF624QDF/@@download/ENCFF624QDF.bigBed hg19 released missing genetic modification characterization, low read depth characterization(s) pending review ENCFF078CQD bigBed narrowPeak peaks ENCSR633EIC ChIP-seq EFO:0002067 K562 cell line Homo sapiens FLAG-PBX2-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1 ENCFF539OHR 11224782 ENCODE Processing Pipeline dea4595092b14ad79128eaf94c074962 https://www.encodeproject.org/files/ENCFF078CQD/@@download/ENCFF078CQD.bigBed hg19 released missing genetic modification characterization, low read depth characterization(s) pending review ENCFF460HOI bigBed narrowPeak peaks ENCSR633EIC ChIP-seq EFO:0002067 K562 cell line Homo sapiens FLAG-PBX2-human ENCAB697XQW DNA False 2016-06-14 ENCODE 2 ENCFF906WAQ 11037671 ENCODE Processing Pipeline 8329e05c9de35087a07213d4f1740513 https://www.encodeproject.org/files/ENCFF460HOI/@@download/ENCFF460HOI.bigBed hg19 released missing genetic modification characterization, low read depth characterization(s) pending review ENCFF269EMM bed narrowPeak optimal idr thresholded peaks ENCSR633EIC ChIP-seq EFO:0002067 K562 cell line Homo sapiens FLAG-PBX2-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF001TDO, ENCFF539OHR, ENCFF597QZY, ENCFF906WAQ 71060 ENCODE Processing Pipeline af53a063019d668f2053979d501052f0 https://www.encodeproject.org/files/ENCFF269EMM/@@download/ENCFF269EMM.bed.gz hg19 released missing genetic modification characterization, low read depth characterization(s) pending review ENCFF165YNJ bigBed narrowPeak optimal idr thresholded peaks ENCSR633EIC ChIP-seq EFO:0002067 K562 cell line Homo sapiens FLAG-PBX2-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF269EMM 184353 ENCODE Processing Pipeline 8cb1b38390ceebb13e40a29d9fe3f1a7 https://www.encodeproject.org/files/ENCFF165YNJ/@@download/ENCFF165YNJ.bigBed hg19 released missing genetic modification characterization, low read depth characterization(s) pending review ENCFF539OHR bed narrowPeak peaks ENCSR633EIC ChIP-seq EFO:0002067 K562 cell line Homo sapiens FLAG-PBX2-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1 ENCFF061QOJ, ENCFF907MUS 5029003 ENCODE Processing Pipeline 139796eb1ef6b10e47dd7dcd30db30a3 https://www.encodeproject.org/files/ENCFF539OHR/@@download/ENCFF539OHR.bed.gz hg19 released missing genetic modification characterization, low read depth characterization(s) pending review ENCFF906WAQ bed narrowPeak peaks ENCSR633EIC ChIP-seq EFO:0002067 K562 cell line Homo sapiens FLAG-PBX2-human ENCAB697XQW DNA False 2016-06-14 ENCODE 2 ENCFF061QOJ, ENCFF232RDZ 4866259 ENCODE Processing Pipeline 08d4a0372abef1262df64685abf4d357 https://www.encodeproject.org/files/ENCFF906WAQ/@@download/ENCFF906WAQ.bed.gz hg19 released missing genetic modification characterization, low read depth characterization(s) pending review ENCFF072SKI bam alignments ENCSR633EIC ChIP-seq EFO:0002067 K562 cell line Homo sapiens FLAG-PBX2-human ENCAB697XQW DNA False 2016-06-14 ENCODE 2 50 ENCFF526NYU, ENCFF643CGH 708343934 ENCODE Processing Pipeline 4bade86559c4d07e006fc300cd46f8f4 https://www.encodeproject.org/files/ENCFF072SKI/@@download/ENCFF072SKI.bam GRCh38 released missing genetic modification characterization, low read depth characterization(s) pending review ENCFF100EJJ bam unfiltered alignments ENCSR633EIC ChIP-seq EFO:0002067 K562 cell line Homo sapiens FLAG-PBX2-human ENCAB697XQW DNA False 2016-06-14 ENCODE 2 50 ENCFF526NYU, ENCFF643CGH 940436271 ENCODE Processing Pipeline e8c0bcb0b3fbbb982fd1859945a3682a https://www.encodeproject.org/files/ENCFF100EJJ/@@download/ENCFF100EJJ.bam GRCh38 released missing genetic modification characterization, low read depth characterization(s) pending review ENCFF933PZQ bam unfiltered alignments ENCSR633EIC ChIP-seq EFO:0002067 K562 cell line Homo sapiens FLAG-PBX2-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1 50 ENCFF253ROA, ENCFF643CGH 1524171628 ENCODE Processing Pipeline 7aa02943d9d5b3a9dc4a11ffc4da18d8 https://www.encodeproject.org/files/ENCFF933PZQ/@@download/ENCFF933PZQ.bam GRCh38 released missing genetic modification characterization, low read depth characterization(s) pending review ENCFF030XLK bam alignments ENCSR633EIC ChIP-seq EFO:0002067 K562 cell line Homo sapiens FLAG-PBX2-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1 50 ENCFF253ROA, ENCFF643CGH 1153689566 ENCODE Processing Pipeline af8caa2694858009872092e34b9e23c8 https://www.encodeproject.org/files/ENCFF030XLK/@@download/ENCFF030XLK.bam GRCh38 released missing genetic modification characterization, low read depth characterization(s) pending review ENCFF256VOX bigWig signal p-value ENCSR633EIC ChIP-seq EFO:0002067 K562 cell line Homo sapiens FLAG-PBX2-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1 ENCFF030XLK, ENCFF332SVJ 865119991 ENCODE Processing Pipeline 0cf1882dc05bb45d6f0167bb1107639d https://www.encodeproject.org/files/ENCFF256VOX/@@download/ENCFF256VOX.bigWig GRCh38 released missing genetic modification characterization, low read depth characterization(s) pending review ENCFF923GZG bigWig signal p-value ENCSR633EIC ChIP-seq EFO:0002067 K562 cell line Homo sapiens FLAG-PBX2-human ENCAB697XQW DNA False 2016-06-14 ENCODE 2 ENCFF072SKI, ENCFF332SVJ 826378777 ENCODE Processing Pipeline c0a57ee59eb8dd3c623562acf450c7e0 https://www.encodeproject.org/files/ENCFF923GZG/@@download/ENCFF923GZG.bigWig GRCh38 released missing genetic modification characterization, low read depth characterization(s) pending review ENCFF848NVR bigWig signal p-value ENCSR633EIC ChIP-seq EFO:0002067 K562 cell line Homo sapiens FLAG-PBX2-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF030XLK, ENCFF072SKI, ENCFF332SVJ 1026327441 ENCODE Processing Pipeline 85ea7855f034f8ae16e727da759f6ef4 https://www.encodeproject.org/files/ENCFF848NVR/@@download/ENCFF848NVR.bigWig GRCh38 released missing genetic modification characterization, low read depth characterization(s) pending review ENCFF838JMR bigWig fold change over control ENCSR633EIC ChIP-seq EFO:0002067 K562 cell line Homo sapiens FLAG-PBX2-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1 ENCFF030XLK, ENCFF332SVJ 696890026 ENCODE Processing Pipeline e47a68c8c3e4302a9cbaa89319a6ed3b https://www.encodeproject.org/files/ENCFF838JMR/@@download/ENCFF838JMR.bigWig GRCh38 released missing genetic modification characterization, low read depth characterization(s) pending review ENCFF364TGB bigWig fold change over control ENCSR633EIC ChIP-seq EFO:0002067 K562 cell line Homo sapiens FLAG-PBX2-human ENCAB697XQW DNA False 2016-06-14 ENCODE 2 ENCFF072SKI, ENCFF332SVJ 530123314 ENCODE Processing Pipeline dddd4248670ec1f6d933a22682bd647e https://www.encodeproject.org/files/ENCFF364TGB/@@download/ENCFF364TGB.bigWig GRCh38 released missing genetic modification characterization, low read depth characterization(s) pending review ENCFF255VXF bigWig fold change over control ENCSR633EIC ChIP-seq EFO:0002067 K562 cell line Homo sapiens FLAG-PBX2-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF030XLK, ENCFF072SKI, ENCFF332SVJ 981924076 ENCODE Processing Pipeline 37ceaa27d9b24bdff803c2b6b90733b0 https://www.encodeproject.org/files/ENCFF255VXF/@@download/ENCFF255VXF.bigWig GRCh38 released missing genetic modification characterization, low read depth characterization(s) pending review ENCFF428CPW bed narrowPeak peaks ENCSR633EIC ChIP-seq EFO:0002067 K562 cell line Homo sapiens FLAG-PBX2-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1 ENCFF030XLK, ENCFF332SVJ 4789332 ENCODE Processing Pipeline ac6bfa830672a3c48296508dab15ad48 https://www.encodeproject.org/files/ENCFF428CPW/@@download/ENCFF428CPW.bed.gz GRCh38 released missing genetic modification characterization, low read depth characterization(s) pending review ENCFF479NRZ bed narrowPeak peaks ENCSR633EIC ChIP-seq EFO:0002067 K562 cell line Homo sapiens FLAG-PBX2-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF030XLK, ENCFF072SKI, ENCFF332SVJ 5559162 ENCODE Processing Pipeline 1fe0e3b2fa1fbd6d5f49583c1e94b74d https://www.encodeproject.org/files/ENCFF479NRZ/@@download/ENCFF479NRZ.bed.gz GRCh38 released missing genetic modification characterization, low read depth characterization(s) pending review ENCFF743XUM bigBed narrowPeak peaks ENCSR633EIC ChIP-seq EFO:0002067 K562 cell line Homo sapiens FLAG-PBX2-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1 ENCFF428CPW 11116391 ENCODE Processing Pipeline 040d4de0b3147c8ab92032049d3be3f1 https://www.encodeproject.org/files/ENCFF743XUM/@@download/ENCFF743XUM.bigBed GRCh38 released missing genetic modification characterization, low read depth characterization(s) pending review ENCFF603XZJ bigBed narrowPeak peaks ENCSR633EIC ChIP-seq EFO:0002067 K562 cell line Homo sapiens FLAG-PBX2-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF479NRZ 11626495 ENCODE Processing Pipeline ecdfd614829af32f2c281878f6ea44e9 https://www.encodeproject.org/files/ENCFF603XZJ/@@download/ENCFF603XZJ.bigBed GRCh38 released missing genetic modification characterization, low read depth characterization(s) pending review ENCFF958UWK bed narrowPeak peaks ENCSR633EIC ChIP-seq EFO:0002067 K562 cell line Homo sapiens FLAG-PBX2-human ENCAB697XQW DNA False 2016-06-14 ENCODE 2 ENCFF072SKI, ENCFF332SVJ 4569141 ENCODE Processing Pipeline 5833361a90c90b9a365f6a3de284a994 https://www.encodeproject.org/files/ENCFF958UWK/@@download/ENCFF958UWK.bed.gz GRCh38 released missing genetic modification characterization, low read depth characterization(s) pending review ENCFF648NTJ bigBed narrowPeak optimal idr thresholded peaks ENCSR633EIC ChIP-seq EFO:0002067 K562 cell line Homo sapiens FLAG-PBX2-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF925OBR 187356 ENCODE Processing Pipeline 391a1c7279f2d380f1d8614424d1f06f https://www.encodeproject.org/files/ENCFF648NTJ/@@download/ENCFF648NTJ.bigBed GRCh38 released missing genetic modification characterization, low read depth characterization(s) pending review ENCFF233ENP bigBed narrowPeak peaks ENCSR633EIC ChIP-seq EFO:0002067 K562 cell line Homo sapiens FLAG-PBX2-human ENCAB697XQW DNA False 2016-06-14 ENCODE 2 ENCFF958UWK 10917607 ENCODE Processing Pipeline 382837f9da03d6ba59538e2d03555c69 https://www.encodeproject.org/files/ENCFF233ENP/@@download/ENCFF233ENP.bigBed GRCh38 released missing genetic modification characterization, low read depth characterization(s) pending review ENCFF270VUX bed narrowPeak conservative idr thresholded peaks ENCSR633EIC ChIP-seq EFO:0002067 K562 cell line Homo sapiens FLAG-PBX2-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF419RSJ, ENCFF428CPW, ENCFF479NRZ, ENCFF958UWK 70616 ENCODE Processing Pipeline d2e6b29ef9a1a8ee426483e95978a335 https://www.encodeproject.org/files/ENCFF270VUX/@@download/ENCFF270VUX.bed.gz GRCh38 released missing genetic modification characterization, low read depth characterization(s) pending review ENCFF185OAW bigBed narrowPeak conservative idr thresholded peaks ENCSR633EIC ChIP-seq EFO:0002067 K562 cell line Homo sapiens FLAG-PBX2-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF270VUX 185774 ENCODE Processing Pipeline 0f19fbfcae4d92b256f10076fa8ca2e6 https://www.encodeproject.org/files/ENCFF185OAW/@@download/ENCFF185OAW.bigBed GRCh38 released missing genetic modification characterization, low read depth characterization(s) pending review ENCFF925OBR bed narrowPeak optimal idr thresholded peaks ENCSR633EIC ChIP-seq EFO:0002067 K562 cell line Homo sapiens FLAG-PBX2-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF419RSJ, ENCFF428CPW, ENCFF479NRZ, ENCFF958UWK 71594 ENCODE Processing Pipeline a192e09fb75616923efec4f248adf041 https://www.encodeproject.org/files/ENCFF925OBR/@@download/ENCFF925OBR.bed.gz GRCh38 released missing genetic modification characterization, low read depth characterization(s) pending review ENCFF000YSI bam alignments ENCSR000EVY ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM28-human ENCAB000AIE DNA see document see document False 2011-10-29 ENCODE 1 ENCFF000YSZ 370319550 Peggy Farnham, USC 1e16fa53324b9097c4c9ed5d3f7bdb40 https://www.encodeproject.org/files/ENCFF000YSI/@@download/ENCFF000YSI.bam hg19 archived mixed read lengths, low read depth, mild to moderate bottlenecking, low read length inconsistent mapped reads lengths insufficient read length, insufficient read depth ENCFF000YSJ bam alignments ENCSR000EVY ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM28-human ENCAB000AIE DNA see document see document False 2011-10-29 ENCODE 2 ENCFF000YTA 702043844 Peggy Farnham, USC 641652e7188f7ba8d4fa0095e9cbd8b6 https://www.encodeproject.org/files/ENCFF000YSJ/@@download/ENCFF000YSJ.bam hg19 archived mixed read lengths, low read depth, mild to moderate bottlenecking, low read length inconsistent mapped reads lengths insufficient read length, insufficient read depth ENCFF000YSK bigBed narrowPeak peaks ENCSR000EVY ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM28-human ENCAB000AIE DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF001VNO 1077555 Peggy Farnham, USC a57fd16ecef0ac30d02f76e8612ad498 https://www.encodeproject.org/files/ENCFF000YSK/@@download/ENCFF000YSK.bigBed hg19 archived mixed read lengths, low read depth, mild to moderate bottlenecking, low read length inconsistent mapped reads lengths insufficient read length, insufficient read depth ENCFF000YSM bigWig signal ENCSR000EVY ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM28-human ENCAB000AIE DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF000YSI, ENCFF000YSJ 352284026 Peggy Farnham, USC ff1c0b0983e5a2655e6abfdc62779656 https://www.encodeproject.org/files/ENCFF000YSM/@@download/ENCFF000YSM.bigWig hg19 archived mixed read lengths, low read depth, mild to moderate bottlenecking, low read length inconsistent mapped reads lengths insufficient read length, insufficient read depth ENCFF000YSZ fastq reads ENCSR000EVY ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM28-human ENCAB000AIE DNA see document see document False 2011-10-29 ENCODE 1 1 32 single-ended 963207391 Peggy Farnham, USC 0d93a5f061166053075d7addc4142300 https://www.encodeproject.org/files/ENCFF000YSZ/@@download/ENCFF000YSZ.fastq.gz Illumina Genome Analyzer /files/ENCFF000VEK/ released mixed read lengths, low read depth, mild to moderate bottlenecking, inconsistent control read length, low read length inconsistent mapped reads lengths insufficient read length, insufficient read depth ENCFF000YTA fastq reads ENCSR000EVY ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM28-human ENCAB000AIE DNA see document see document False 2011-10-29 ENCODE 2 1 36 single-ended 521698463 Peggy Farnham, USC bdb0b16d2c161b00ed1ca1ff95b89897 https://www.encodeproject.org/files/ENCFF000YTA/@@download/ENCFF000YTA.fastq.gz Illumina Genome Analyzer /files/ENCFF000VEK/ released mixed read lengths, low read depth, inconsistent control read length, mild to moderate bottlenecking, low read length inconsistent mapped reads lengths insufficient read length, insufficient read depth ENCFF001VNO bed narrowPeak peaks ENCSR000EVY ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM28-human ENCAB000AIE DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF000YSI, ENCFF000YSJ 465250 Peggy Farnham, USC aa5a2a7e6d220638803775fcbf768e3e https://www.encodeproject.org/files/ENCFF001VNO/@@download/ENCFF001VNO.bed.gz hg19 archived mixed read lengths, low read depth, mild to moderate bottlenecking, low read length inconsistent mapped reads lengths insufficient read length, insufficient read depth ENCFF890VHE bam unfiltered alignments ENCSR000EVY ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM28-human ENCAB000AIE DNA see document see document False 2011-10-29 ENCODE 2 28 ENCFF000YTA, ENCFF643CGH 574624683 ENCODE Processing Pipeline ad3e0f5d7ea3c5b515f1552a85a1bfa8 https://www.encodeproject.org/files/ENCFF890VHE/@@download/ENCFF890VHE.bam GRCh38 released mixed read lengths, low read depth, mild to moderate bottlenecking, low read length inconsistent mapped reads lengths insufficient read length, insufficient read depth ENCFF248MZT bam unfiltered alignments ENCSR000EVY ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM28-human ENCAB000AIE DNA see document see document False 2011-10-29 ENCODE 1 32 ENCFF000YSZ, ENCFF807MUK 1271043887 ENCODE Processing Pipeline 0d7dd8bdb567e62ec9c0569768379280 https://www.encodeproject.org/files/ENCFF248MZT/@@download/ENCFF248MZT.bam hg19 released mixed read lengths, low read depth, mild to moderate bottlenecking, low read length inconsistent mapped reads lengths insufficient read length, insufficient read depth ENCFF267KML bam unfiltered alignments ENCSR000EVY ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM28-human ENCAB000AIE DNA see document see document False 2011-10-29 ENCODE 2 36 ENCFF000YTA, ENCFF807MUK 637101522 ENCODE Processing Pipeline 6e45c096d788d4195a0595ba75693061 https://www.encodeproject.org/files/ENCFF267KML/@@download/ENCFF267KML.bam hg19 released mixed read lengths, low read depth, mild to moderate bottlenecking, low read length inconsistent mapped reads lengths insufficient read length, insufficient read depth ENCFF409OXB bam unfiltered alignments ENCSR000EVY ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM28-human ENCAB000AIE DNA see document see document False 2011-10-29 ENCODE 1 28 ENCFF000YSZ, ENCFF643CGH 1207165341 ENCODE Processing Pipeline d5c445d17f24ac6d04fe546f77f0e18c https://www.encodeproject.org/files/ENCFF409OXB/@@download/ENCFF409OXB.bam GRCh38 released mixed read lengths, low read depth, mild to moderate bottlenecking, low read length inconsistent mapped reads lengths insufficient read length, insufficient read depth ENCFF002CXA bed narrowPeak optimal idr thresholded peaks ENCSR000EVY ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM28-human ENCAB000AIE DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF000YSI, ENCFF000YSJ 130936 ENCODE Consortium Analysis Working Group 44c383b2a77c0adb37a0898c290fb584 https://www.encodeproject.org/files/ENCFF002CXA/@@download/ENCFF002CXA.bed.gz hg19 archived mixed read lengths, low read depth, mild to moderate bottlenecking, low read length inconsistent mapped reads lengths insufficient read length, insufficient read depth ENCFF713FIQ bigBed narrowPeak optimal idr thresholded peaks ENCSR000EVY ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM28-human ENCAB000AIE DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF002CXA 405157 ENCODE Consortium c7b02ee483fb9f342351b2119a28aba5 https://www.encodeproject.org/files/ENCFF713FIQ/@@download/ENCFF713FIQ.bigBed hg19 archived mixed read lengths, low read depth, mild to moderate bottlenecking, low read length inconsistent mapped reads lengths insufficient read length, insufficient read depth ENCFF282OJT bam alignments ENCSR000EVY ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM28-human ENCAB000AIE DNA see document see document False 2011-10-29 ENCODE 1 32 ENCFF000YSZ, ENCFF807MUK 399585274 ENCODE Processing Pipeline 56a11e45edd36f6a59c68bb56307a5c8 https://www.encodeproject.org/files/ENCFF282OJT/@@download/ENCFF282OJT.bam hg19 released mixed read lengths, low read depth, mild to moderate bottlenecking, low read length inconsistent mapped reads lengths insufficient read length, insufficient read depth ENCFF997OPU bam alignments ENCSR000EVY ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM28-human ENCAB000AIE DNA see document see document False 2011-10-29 ENCODE 2 36 ENCFF000YTA, ENCFF807MUK 367996924 ENCODE Processing Pipeline 27a6a81acebd4291fbde90ea071ce740 https://www.encodeproject.org/files/ENCFF997OPU/@@download/ENCFF997OPU.bam hg19 released mixed read lengths, low read depth, mild to moderate bottlenecking, low read length inconsistent mapped reads lengths insufficient read length, insufficient read depth ENCFF432ART bigWig fold change over control ENCSR000EVY ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM28-human ENCAB000AIE DNA see document see document False 2011-10-29 ENCODE 1 ENCFF051ZZR, ENCFF282OJT 356134312 ENCODE Processing Pipeline 4d9704f991294a9d1ba7b463c9b1eca3 https://www.encodeproject.org/files/ENCFF432ART/@@download/ENCFF432ART.bigWig hg19 released mixed read lengths, low read depth, mild to moderate bottlenecking, low read length inconsistent mapped reads lengths insufficient read length, insufficient read depth ENCFF273OJT bigWig signal p-value ENCSR000EVY ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM28-human ENCAB000AIE DNA see document see document False 2011-10-29 ENCODE 1 ENCFF051ZZR, ENCFF282OJT 402305217 ENCODE Processing Pipeline d525b2edce2c34b3ae4a0619ec1cb677 https://www.encodeproject.org/files/ENCFF273OJT/@@download/ENCFF273OJT.bigWig hg19 released mixed read lengths, low read depth, mild to moderate bottlenecking, low read length inconsistent mapped reads lengths insufficient read length, insufficient read depth ENCFF313XDL bigWig fold change over control ENCSR000EVY ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM28-human ENCAB000AIE DNA see document see document False 2011-10-29 ENCODE 2 ENCFF051ZZR, ENCFF997OPU 248878556 ENCODE Processing Pipeline 8b876fb96a392e72f065a7f17904eba7 https://www.encodeproject.org/files/ENCFF313XDL/@@download/ENCFF313XDL.bigWig hg19 released mixed read lengths, low read depth, mild to moderate bottlenecking, low read length inconsistent mapped reads lengths insufficient read length, insufficient read depth ENCFF863UQC bigWig signal p-value ENCSR000EVY ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM28-human ENCAB000AIE DNA see document see document False 2011-10-29 ENCODE 2 ENCFF051ZZR, ENCFF997OPU 365149930 ENCODE Processing Pipeline 05d5798494eb2f6c42fafaca94e102ec https://www.encodeproject.org/files/ENCFF863UQC/@@download/ENCFF863UQC.bigWig hg19 released mixed read lengths, low read depth, mild to moderate bottlenecking, low read length inconsistent mapped reads lengths insufficient read length, insufficient read depth ENCFF811QWR bed narrowPeak peaks ENCSR000EVY ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM28-human ENCAB000AIE DNA see document see document False 2011-10-29 ENCODE 1 ENCFF051ZZR, ENCFF282OJT 6238078 ENCODE Processing Pipeline c863eb60784426b6be172bd9933ced69 https://www.encodeproject.org/files/ENCFF811QWR/@@download/ENCFF811QWR.bed.gz hg19 released mixed read lengths, low read depth, mild to moderate bottlenecking, low read length inconsistent mapped reads lengths insufficient read length, insufficient read depth ENCFF467GQJ bigBed narrowPeak peaks ENCSR000EVY ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM28-human ENCAB000AIE DNA see document see document False 2011-10-29 ENCODE 2 ENCFF401VYC 13076841 ENCODE Processing Pipeline 6e10ffb156a8fc69a97c9cd09eab4df0 https://www.encodeproject.org/files/ENCFF467GQJ/@@download/ENCFF467GQJ.bigBed hg19 released mixed read lengths, low read depth, mild to moderate bottlenecking, low read length inconsistent mapped reads lengths insufficient read length, insufficient read depth ENCFF220VNS bigBed narrowPeak peaks ENCSR000EVY ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM28-human ENCAB000AIE DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF007QAA 12932592 ENCODE Processing Pipeline 7216071b800de95ff184c8f3e614f7d9 https://www.encodeproject.org/files/ENCFF220VNS/@@download/ENCFF220VNS.bigBed hg19 released mixed read lengths, low read depth, mild to moderate bottlenecking, low read length inconsistent mapped reads lengths insufficient read length, insufficient read depth ENCFF792RWP bigBed narrowPeak optimal idr thresholded peaks ENCSR000EVY ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM28-human ENCAB000AIE DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF591BIT 285003 ENCODE Processing Pipeline f48edd14c49982b41b73f266e50aad18 https://www.encodeproject.org/files/ENCFF792RWP/@@download/ENCFF792RWP.bigBed hg19 released mixed read lengths, low read depth, mild to moderate bottlenecking, low read length inconsistent mapped reads lengths insufficient read length, insufficient read depth ENCFF974EHC bigWig signal p-value ENCSR000EVY ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM28-human ENCAB000AIE DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF051ZZR, ENCFF282OJT, ENCFF997OPU 547191687 ENCODE Processing Pipeline 5a3a3185b7745b3837fa7b29a80a8ef8 https://www.encodeproject.org/files/ENCFF974EHC/@@download/ENCFF974EHC.bigWig hg19 released mixed read lengths, low read depth, mild to moderate bottlenecking, low read length inconsistent mapped reads lengths insufficient read length, insufficient read depth ENCFF910BQM bigWig fold change over control ENCSR000EVY ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM28-human ENCAB000AIE DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF051ZZR, ENCFF282OJT, ENCFF997OPU 536758996 ENCODE Processing Pipeline 2ea2bce55270fa55b2c3bccdcd21df20 https://www.encodeproject.org/files/ENCFF910BQM/@@download/ENCFF910BQM.bigWig hg19 released mixed read lengths, low read depth, mild to moderate bottlenecking, low read length inconsistent mapped reads lengths insufficient read length, insufficient read depth ENCFF007QAA bed narrowPeak peaks ENCSR000EVY ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM28-human ENCAB000AIE DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF051ZZR, ENCFF282OJT, ENCFF997OPU 6759221 ENCODE Processing Pipeline d57794fde8102c7b0cb404948ea6c3d2 https://www.encodeproject.org/files/ENCFF007QAA/@@download/ENCFF007QAA.bed.gz hg19 released mixed read lengths, low read depth, mild to moderate bottlenecking, low read length inconsistent mapped reads lengths insufficient read length, insufficient read depth ENCFF624JZG bigBed narrowPeak peaks ENCSR000EVY ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM28-human ENCAB000AIE DNA see document see document False 2011-10-29 ENCODE 1 ENCFF811QWR 12893781 ENCODE Processing Pipeline 03d3eb3bbd1df0292de2a26a95d31fd5 https://www.encodeproject.org/files/ENCFF624JZG/@@download/ENCFF624JZG.bigBed hg19 released mixed read lengths, low read depth, mild to moderate bottlenecking, low read length inconsistent mapped reads lengths insufficient read length, insufficient read depth ENCFF095UIS bigBed narrowPeak conservative idr thresholded peaks ENCSR000EVY ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM28-human ENCAB000AIE DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF016PZU 274170 ENCODE Processing Pipeline 911084aea8b2a0a4589587fd3b0ff6e1 https://www.encodeproject.org/files/ENCFF095UIS/@@download/ENCFF095UIS.bigBed hg19 released mixed read lengths, low read depth, mild to moderate bottlenecking, low read length inconsistent mapped reads lengths insufficient read length, insufficient read depth ENCFF591BIT bed narrowPeak optimal idr thresholded peaks ENCSR000EVY ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM28-human ENCAB000AIE DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF001TDO, ENCFF007QAA, ENCFF401VYC, ENCFF811QWR 109809 ENCODE Processing Pipeline 3cbd8317834ea4a0b339e357c3badbe1 https://www.encodeproject.org/files/ENCFF591BIT/@@download/ENCFF591BIT.bed.gz hg19 released mixed read lengths, low read depth, mild to moderate bottlenecking, low read length inconsistent mapped reads lengths insufficient read length, insufficient read depth ENCFF401VYC bed narrowPeak peaks ENCSR000EVY ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM28-human ENCAB000AIE DNA see document see document False 2011-10-29 ENCODE 2 ENCFF051ZZR, ENCFF997OPU 5607888 ENCODE Processing Pipeline eaa1674d9f3913d9ac45c3bc0d9f5f41 https://www.encodeproject.org/files/ENCFF401VYC/@@download/ENCFF401VYC.bed.gz hg19 released mixed read lengths, low read depth, mild to moderate bottlenecking, low read length inconsistent mapped reads lengths insufficient read length, insufficient read depth ENCFF016PZU bed narrowPeak conservative idr thresholded peaks ENCSR000EVY ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM28-human ENCAB000AIE DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF001TDO, ENCFF007QAA, ENCFF401VYC, ENCFF811QWR 104182 ENCODE Processing Pipeline 12705056c7010bf8e6f71e45226d32a7 https://www.encodeproject.org/files/ENCFF016PZU/@@download/ENCFF016PZU.bed.gz hg19 released mixed read lengths, low read depth, mild to moderate bottlenecking, low read length inconsistent mapped reads lengths insufficient read length, insufficient read depth ENCFF798UCN bam unfiltered alignments ENCSR000EVY ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM28-human ENCAB000AIE DNA see document see document False 2011-10-29 ENCODE 2 36 ENCFF000YTA, ENCFF643CGH 640327375 ENCODE Processing Pipeline 2009acb33c36f071d897f54de1e74165 https://www.encodeproject.org/files/ENCFF798UCN/@@download/ENCFF798UCN.bam GRCh38 archived mixed read lengths, low read depth, mild to moderate bottlenecking, low read length inconsistent mapped reads lengths insufficient read length, insufficient read depth ENCFF166JNV bam alignments ENCSR000EVY ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM28-human ENCAB000AIE DNA see document see document False 2011-10-29 ENCODE 2 36 ENCFF000YTA, ENCFF643CGH 367775356 ENCODE Processing Pipeline 2856144264964220cbb51ad43cce72d8 https://www.encodeproject.org/files/ENCFF166JNV/@@download/ENCFF166JNV.bam GRCh38 archived mixed read lengths, low read depth, mild to moderate bottlenecking, low read length inconsistent mapped reads lengths insufficient read length, insufficient read depth ENCFF904REX bam unfiltered alignments ENCSR000EVY ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM28-human ENCAB000AIE DNA see document see document False 2011-10-29 ENCODE 1 32 ENCFF000YSZ, ENCFF643CGH 1278741057 ENCODE Processing Pipeline 5a28e3fea2dac505d2f2221f6f0185f7 https://www.encodeproject.org/files/ENCFF904REX/@@download/ENCFF904REX.bam GRCh38 archived mixed read lengths, low read depth, mild to moderate bottlenecking, low read length inconsistent mapped reads lengths insufficient read length, insufficient read depth ENCFF921KTI bam alignments ENCSR000EVY ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM28-human ENCAB000AIE DNA see document see document False 2011-10-29 ENCODE 1 32 ENCFF000YSZ, ENCFF643CGH 399368588 ENCODE Processing Pipeline 2a43e8fa232cc6793c8f1c323e486c1e https://www.encodeproject.org/files/ENCFF921KTI/@@download/ENCFF921KTI.bam GRCh38 archived mixed read lengths, low read depth, mild to moderate bottlenecking, low read length inconsistent mapped reads lengths insufficient read length, insufficient read depth ENCFF170NGB bam alignments ENCSR000EVY ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM28-human ENCAB000AIE DNA see document see document False 2011-10-29 ENCODE 1 28 ENCFF000YSZ, ENCFF643CGH 363853584 ENCODE Processing Pipeline d9b58d6ef740f4969066f700e15c0e79 https://www.encodeproject.org/files/ENCFF170NGB/@@download/ENCFF170NGB.bam GRCh38 released mixed read lengths, low read depth, mild to moderate bottlenecking, low read length inconsistent mapped reads lengths insufficient read length, insufficient read depth ENCFF426DLJ bam alignments ENCSR000EVY ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM28-human ENCAB000AIE DNA see document see document False 2011-10-29 ENCODE 2 28 ENCFF000YTA, ENCFF643CGH 299202314 ENCODE Processing Pipeline 35e3e23b5d1fb9f9ceb38d31c018d373 https://www.encodeproject.org/files/ENCFF426DLJ/@@download/ENCFF426DLJ.bam GRCh38 released mixed read lengths, low read depth, mild to moderate bottlenecking, low read length inconsistent mapped reads lengths insufficient read length, insufficient read depth ENCFF832LHP bigWig signal p-value ENCSR000EVY ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM28-human ENCAB000AIE DNA see document see document False 2011-10-29 ENCODE 1 ENCFF170NGB, ENCFF355SGP 376648676 ENCODE Processing Pipeline 7b508761257ee3ac50bbbe5e030fea4c https://www.encodeproject.org/files/ENCFF832LHP/@@download/ENCFF832LHP.bigWig GRCh38 released mixed read lengths, low read depth, mild to moderate bottlenecking, low read length inconsistent mapped reads lengths insufficient read length, insufficient read depth ENCFF524EWQ bigWig signal p-value ENCSR000EVY ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM28-human ENCAB000AIE DNA see document see document False 2011-10-29 ENCODE 2 ENCFF355SGP, ENCFF426DLJ 344559478 ENCODE Processing Pipeline c339df8b937a06f7b4ba51bb98d17f9c https://www.encodeproject.org/files/ENCFF524EWQ/@@download/ENCFF524EWQ.bigWig GRCh38 released mixed read lengths, low read depth, mild to moderate bottlenecking, low read length inconsistent mapped reads lengths insufficient read length, insufficient read depth ENCFF430OPH bigWig fold change over control ENCSR000EVY ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM28-human ENCAB000AIE DNA see document see document False 2011-10-29 ENCODE 1 ENCFF170NGB, ENCFF355SGP 351321057 ENCODE Processing Pipeline 77380cc654e023f8eab5ea8bf118433c https://www.encodeproject.org/files/ENCFF430OPH/@@download/ENCFF430OPH.bigWig GRCh38 released mixed read lengths, low read depth, mild to moderate bottlenecking, low read length inconsistent mapped reads lengths insufficient read length, insufficient read depth ENCFF048KMO bigWig signal p-value ENCSR000EVY ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM28-human ENCAB000AIE DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF170NGB, ENCFF355SGP, ENCFF426DLJ 458663974 ENCODE Processing Pipeline e78421fcf8f955f4ab114bce67bbb70c https://www.encodeproject.org/files/ENCFF048KMO/@@download/ENCFF048KMO.bigWig GRCh38 released mixed read lengths, low read depth, mild to moderate bottlenecking, low read length inconsistent mapped reads lengths insufficient read length, insufficient read depth ENCFF513PHS bigWig fold change over control ENCSR000EVY ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM28-human ENCAB000AIE DNA see document see document False 2011-10-29 ENCODE 2 ENCFF355SGP, ENCFF426DLJ 234881050 ENCODE Processing Pipeline 2de54fd8130c54cf4e051e50aacf50ac https://www.encodeproject.org/files/ENCFF513PHS/@@download/ENCFF513PHS.bigWig GRCh38 released mixed read lengths, low read depth, mild to moderate bottlenecking, low read length inconsistent mapped reads lengths insufficient read length, insufficient read depth ENCFF009LSV bigWig fold change over control ENCSR000EVY ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM28-human ENCAB000AIE DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF170NGB, ENCFF355SGP, ENCFF426DLJ 519738763 ENCODE Processing Pipeline 398fba1881cd2f09d73b280023db2289 https://www.encodeproject.org/files/ENCFF009LSV/@@download/ENCFF009LSV.bigWig GRCh38 released mixed read lengths, low read depth, mild to moderate bottlenecking, low read length inconsistent mapped reads lengths insufficient read length, insufficient read depth ENCFF290CRI bigBed narrowPeak peaks ENCSR000EVY ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM28-human ENCAB000AIE DNA see document see document False 2011-10-29 ENCODE 1 ENCFF745YFR 12885211 ENCODE Processing Pipeline e9dc2cb14af2e75dc2ab7bdd3cc12cea https://www.encodeproject.org/files/ENCFF290CRI/@@download/ENCFF290CRI.bigBed GRCh38 released mixed read lengths, low read depth, mild to moderate bottlenecking, low read length inconsistent mapped reads lengths insufficient read length, insufficient read depth ENCFF745YFR bed narrowPeak peaks ENCSR000EVY ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM28-human ENCAB000AIE DNA see document see document False 2011-10-29 ENCODE 1 ENCFF170NGB, ENCFF355SGP 5897867 ENCODE Processing Pipeline a633db35d0114fb5040184b527fa54d1 https://www.encodeproject.org/files/ENCFF745YFR/@@download/ENCFF745YFR.bed.gz GRCh38 released mixed read lengths, low read depth, mild to moderate bottlenecking, low read length inconsistent mapped reads lengths insufficient read length, insufficient read depth ENCFF351LUY bed narrowPeak peaks ENCSR000EVY ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM28-human ENCAB000AIE DNA see document see document False 2011-10-29 ENCODE 2 ENCFF355SGP, ENCFF426DLJ 5199287 ENCODE Processing Pipeline 49e747dd868cfad84bd26221e9370ecf https://www.encodeproject.org/files/ENCFF351LUY/@@download/ENCFF351LUY.bed.gz GRCh38 released mixed read lengths, low read depth, mild to moderate bottlenecking, low read length inconsistent mapped reads lengths insufficient read length, insufficient read depth ENCFF905ZZX bed narrowPeak peaks ENCSR000EVY ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM28-human ENCAB000AIE DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF170NGB, ENCFF355SGP, ENCFF426DLJ 6589321 ENCODE Processing Pipeline 6d1ff5378217060b24d44cafaaa05ca7 https://www.encodeproject.org/files/ENCFF905ZZX/@@download/ENCFF905ZZX.bed.gz GRCh38 released mixed read lengths, low read depth, mild to moderate bottlenecking, low read length inconsistent mapped reads lengths insufficient read length, insufficient read depth ENCFF642FAK bigBed narrowPeak peaks ENCSR000EVY ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM28-human ENCAB000AIE DNA see document see document False 2011-10-29 ENCODE 2 ENCFF351LUY 12977297 ENCODE Processing Pipeline 955d1b317ec60d0c540722b016469399 https://www.encodeproject.org/files/ENCFF642FAK/@@download/ENCFF642FAK.bigBed GRCh38 released mixed read lengths, low read depth, mild to moderate bottlenecking, low read length inconsistent mapped reads lengths insufficient read length, insufficient read depth ENCFF072MZT bigBed narrowPeak peaks ENCSR000EVY ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM28-human ENCAB000AIE DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF905ZZX 12935760 ENCODE Processing Pipeline dd05292e5f79c50001e5e08f9856cdce https://www.encodeproject.org/files/ENCFF072MZT/@@download/ENCFF072MZT.bigBed GRCh38 released mixed read lengths, low read depth, mild to moderate bottlenecking, low read length inconsistent mapped reads lengths insufficient read length, insufficient read depth ENCFF821JKR bed narrowPeak conservative idr thresholded peaks ENCSR000EVY ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM28-human ENCAB000AIE DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF351LUY, ENCFF419RSJ, ENCFF745YFR, ENCFF905ZZX 85206 ENCODE Processing Pipeline ed82cc20a0e0dcd78816ea3b83d7fcf8 https://www.encodeproject.org/files/ENCFF821JKR/@@download/ENCFF821JKR.bed.gz GRCh38 released mixed read lengths, low read depth, mild to moderate bottlenecking, low read length inconsistent mapped reads lengths insufficient read length, insufficient read depth ENCFF110MOR bigBed narrowPeak conservative idr thresholded peaks ENCSR000EVY ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM28-human ENCAB000AIE DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF821JKR 240932 ENCODE Processing Pipeline ea69e0309392c1e5a42086642aef79d4 https://www.encodeproject.org/files/ENCFF110MOR/@@download/ENCFF110MOR.bigBed GRCh38 released mixed read lengths, low read depth, mild to moderate bottlenecking, low read length inconsistent mapped reads lengths insufficient read length, insufficient read depth ENCFF623ELO bed narrowPeak optimal idr thresholded peaks ENCSR000EVY ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM28-human ENCAB000AIE DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF351LUY, ENCFF419RSJ, ENCFF745YFR, ENCFF905ZZX 89903 ENCODE Processing Pipeline 99942fd6c50b421da7144d15f9b304d1 https://www.encodeproject.org/files/ENCFF623ELO/@@download/ENCFF623ELO.bed.gz GRCh38 released mixed read lengths, low read depth, mild to moderate bottlenecking, low read length inconsistent mapped reads lengths insufficient read length, insufficient read depth ENCFF334YXF bigBed narrowPeak optimal idr thresholded peaks ENCSR000EVY ChIP-seq EFO:0002067 K562 cell line Homo sapiens TRIM28-human ENCAB000AIE DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF623ELO 250535 ENCODE Processing Pipeline dd5106fec7759b4856d0c88a788d103e https://www.encodeproject.org/files/ENCFF334YXF/@@download/ENCFF334YXF.bigBed GRCh38 released mixed read lengths, low read depth, mild to moderate bottlenecking, low read length inconsistent mapped reads lengths insufficient read length, insufficient read depth ENCFF125PLE bam unfiltered alignments ENCSR121PFY ChIP-seq EFO:0002067 K562 cell line Homo sapiens CDC5L-human ENCAB348LKV DNA False 2016-07-28 ENCODE 1 100 ENCFF300KRT, ENCFF807MUK, ENCFF847ZNJ 4452842636 ENCODE Processing Pipeline 269d8cb7e754930844fe6892d73d4217 https://www.encodeproject.org/files/ENCFF125PLE/@@download/ENCFF125PLE.bam hg19 released missing control alignments ENCFF403SSR bam unfiltered alignments ENCSR121PFY ChIP-seq EFO:0002067 K562 cell line Homo sapiens CDC5L-human ENCAB348LKV DNA False 2016-07-28 ENCODE 2 100 ENCFF146CPM, ENCFF807MUK, ENCFF899BAM 4384360181 ENCODE Processing Pipeline 4168d0b3895288a55182f311f28a6aac https://www.encodeproject.org/files/ENCFF403SSR/@@download/ENCFF403SSR.bam hg19 released missing control alignments ENCFF847ZNJ fastq reads ENCSR121PFY ChIP-seq EFO:0002067 K562 cell line Homo sapiens CDC5L-human ENCAB348LKV DNA False 2016-07-28 ENCODE 1 1 100 paired-ended 1 ENCFF300KRT 1966516641 Michael Snyder, Stanford 943ebf4a9d71d0d4aabebe5676beecb1 SRA:SRR5111242 https://www.encodeproject.org/files/ENCFF847ZNJ/@@download/ENCFF847ZNJ.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFF/ released missing control alignments ENCFF146CPM fastq reads ENCSR121PFY ChIP-seq EFO:0002067 K562 cell line Homo sapiens CDC5L-human ENCAB348LKV DNA False 2016-07-28 ENCODE 2 1 100 paired-ended 2 ENCFF899BAM 2031481033 Michael Snyder, Stanford 508fe83e712b5a7a2e4378cf5ed14588 SRA:SRR5111243 https://www.encodeproject.org/files/ENCFF146CPM/@@download/ENCFF146CPM.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFA/ released missing control alignments ENCFF899BAM fastq reads ENCSR121PFY ChIP-seq EFO:0002067 K562 cell line Homo sapiens CDC5L-human ENCAB348LKV DNA False 2016-07-28 ENCODE 2 1 100 paired-ended 1 ENCFF146CPM 1945276195 Michael Snyder, Stanford 1963c347f572c9e12c046e5412e43b2b SRA:SRR5111243 https://www.encodeproject.org/files/ENCFF899BAM/@@download/ENCFF899BAM.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFD/ released missing control alignments ENCFF300KRT fastq reads ENCSR121PFY ChIP-seq EFO:0002067 K562 cell line Homo sapiens CDC5L-human ENCAB348LKV DNA False 2016-07-28 ENCODE 1 1 100 paired-ended 2 ENCFF847ZNJ 2049455028 Michael Snyder, Stanford aafcd61635d104be639c38c049e660e5 SRA:SRR5111242 https://www.encodeproject.org/files/ENCFF300KRT/@@download/ENCFF300KRT.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFH/ released missing control alignments ENCFF069VLP bam alignments ENCSR121PFY ChIP-seq EFO:0002067 K562 cell line Homo sapiens CDC5L-human ENCAB348LKV DNA False 2016-07-28 ENCODE 2 ENCFF146CPM, ENCFF807MUK, ENCFF899BAM 3690499651 ENCODE Processing Pipeline cdf25afb15b52232a3b3b65bf300baff https://www.encodeproject.org/files/ENCFF069VLP/@@download/ENCFF069VLP.bam hg19 released missing control alignments ENCFF984NVJ bam alignments ENCSR121PFY ChIP-seq EFO:0002067 K562 cell line Homo sapiens CDC5L-human ENCAB348LKV DNA False 2016-07-28 ENCODE 1 ENCFF300KRT, ENCFF807MUK, ENCFF847ZNJ 3813242555 ENCODE Processing Pipeline 1324f3ecc9a4792eb396dbee8256dc91 https://www.encodeproject.org/files/ENCFF984NVJ/@@download/ENCFF984NVJ.bam hg19 released missing control alignments ENCFF788VVJ bigWig signal p-value ENCSR121PFY ChIP-seq EFO:0002067 K562 cell line Homo sapiens CDC5L-human ENCAB348LKV DNA False 2016-07-28 ENCODE 2 ENCFF051LWI, ENCFF069VLP 888479849 ENCODE Processing Pipeline 3041ef95903fd77664a17f5043b1202d https://www.encodeproject.org/files/ENCFF788VVJ/@@download/ENCFF788VVJ.bigWig hg19 released missing control alignments ENCFF954DGR bigWig fold change over control ENCSR121PFY ChIP-seq EFO:0002067 K562 cell line Homo sapiens CDC5L-human ENCAB348LKV DNA False 2016-07-28 ENCODE 1 ENCFF581ZJL, ENCFF984NVJ 1134403237 ENCODE Processing Pipeline 6a80f0186621595b88969bb048d0e50a https://www.encodeproject.org/files/ENCFF954DGR/@@download/ENCFF954DGR.bigWig hg19 released missing control alignments ENCFF906YNI bigWig signal p-value ENCSR121PFY ChIP-seq EFO:0002067 K562 cell line Homo sapiens CDC5L-human ENCAB348LKV DNA False 2016-07-28 ENCODE 1 ENCFF581ZJL, ENCFF984NVJ 1247323422 ENCODE Processing Pipeline c0a2f38d62a1d61d7a0e2b89fb8a45f8 https://www.encodeproject.org/files/ENCFF906YNI/@@download/ENCFF906YNI.bigWig hg19 released missing control alignments ENCFF394JZU bigWig signal p-value ENCSR121PFY ChIP-seq EFO:0002067 K562 cell line Homo sapiens CDC5L-human ENCAB348LKV DNA False 2016-07-28 ENCODE 1, 2 ENCFF051LWI, ENCFF069VLP, ENCFF581ZJL, ENCFF984NVJ 1988586707 ENCODE Processing Pipeline 5fd9d5a6d61a9b9f4a99e19a9dc8b241 https://www.encodeproject.org/files/ENCFF394JZU/@@download/ENCFF394JZU.bigWig hg19 released missing control alignments ENCFF739MHD bigWig fold change over control ENCSR121PFY ChIP-seq EFO:0002067 K562 cell line Homo sapiens CDC5L-human ENCAB348LKV DNA False 2016-07-28 ENCODE 1, 2 ENCFF051LWI, ENCFF069VLP, ENCFF581ZJL, ENCFF984NVJ 2019200449 ENCODE Processing Pipeline f8411ce6c6a61401b20997589021d397 https://www.encodeproject.org/files/ENCFF739MHD/@@download/ENCFF739MHD.bigWig hg19 released missing control alignments ENCFF361EMP bed narrowPeak peaks ENCSR121PFY ChIP-seq EFO:0002067 K562 cell line Homo sapiens CDC5L-human ENCAB348LKV DNA False 2016-07-28 ENCODE 1 ENCFF581ZJL, ENCFF984NVJ 6580997 ENCODE Processing Pipeline 2299b20bf8507132afdc05f47fa6d9ae https://www.encodeproject.org/files/ENCFF361EMP/@@download/ENCFF361EMP.bed.gz hg19 released missing control alignments ENCFF830THH bed narrowPeak peaks ENCSR121PFY ChIP-seq EFO:0002067 K562 cell line Homo sapiens CDC5L-human ENCAB348LKV DNA False 2016-07-28 ENCODE 2 ENCFF051LWI, ENCFF069VLP 6570586 ENCODE Processing Pipeline 8e908668460f3de17877175ec4ff2aff https://www.encodeproject.org/files/ENCFF830THH/@@download/ENCFF830THH.bed.gz hg19 released missing control alignments ENCFF582OBV bigBed narrowPeak peaks ENCSR121PFY ChIP-seq EFO:0002067 K562 cell line Homo sapiens CDC5L-human ENCAB348LKV DNA False 2016-07-28 ENCODE 1, 2 ENCFF108JTM 13082465 ENCODE Processing Pipeline 56c8fbe5675bb52ca1059f79ca3d5478 https://www.encodeproject.org/files/ENCFF582OBV/@@download/ENCFF582OBV.bigBed hg19 released missing control alignments ENCFF848NAI bigWig fold change over control ENCSR121PFY ChIP-seq EFO:0002067 K562 cell line Homo sapiens CDC5L-human ENCAB348LKV DNA False 2016-07-28 ENCODE 2 ENCFF051LWI, ENCFF069VLP 1074750675 ENCODE Processing Pipeline b334c01c494ce854287f5248b4153399 https://www.encodeproject.org/files/ENCFF848NAI/@@download/ENCFF848NAI.bigWig hg19 released missing control alignments ENCFF709OCN bigBed narrowPeak conservative idr thresholded peaks ENCSR121PFY ChIP-seq EFO:0002067 K562 cell line Homo sapiens CDC5L-human ENCAB348LKV DNA False 2016-07-28 ENCODE 1, 2 ENCFF820ZHR 197135 ENCODE Processing Pipeline c6af907800845d2baa527a46b6a9f5a7 https://www.encodeproject.org/files/ENCFF709OCN/@@download/ENCFF709OCN.bigBed hg19 released missing control alignments ENCFF108JTM bed narrowPeak peaks ENCSR121PFY ChIP-seq EFO:0002067 K562 cell line Homo sapiens CDC5L-human ENCAB348LKV DNA False 2016-07-28 ENCODE 1, 2 ENCFF051LWI, ENCFF069VLP, ENCFF581ZJL, ENCFF984NVJ 7209529 ENCODE Processing Pipeline da8182b7bcf60321b0c0de562530d7b3 https://www.encodeproject.org/files/ENCFF108JTM/@@download/ENCFF108JTM.bed.gz hg19 released missing control alignments ENCFF820ZHR bed narrowPeak conservative idr thresholded peaks ENCSR121PFY ChIP-seq EFO:0002067 K562 cell line Homo sapiens CDC5L-human ENCAB348LKV DNA False 2016-07-28 ENCODE 1, 2 ENCFF001TDO, ENCFF108JTM, ENCFF361EMP, ENCFF830THH 75366 ENCODE Processing Pipeline 6d38cb6be34d63761a9c45259f85d192 https://www.encodeproject.org/files/ENCFF820ZHR/@@download/ENCFF820ZHR.bed.gz hg19 released missing control alignments ENCFF499TTU bigBed narrowPeak peaks ENCSR121PFY ChIP-seq EFO:0002067 K562 cell line Homo sapiens CDC5L-human ENCAB348LKV DNA False 2016-07-28 ENCODE 1 ENCFF361EMP 13257407 ENCODE Processing Pipeline ce4663582e321c96b803de00c160fc09 https://www.encodeproject.org/files/ENCFF499TTU/@@download/ENCFF499TTU.bigBed hg19 released missing control alignments ENCFF784NDM bigBed narrowPeak peaks ENCSR121PFY ChIP-seq EFO:0002067 K562 cell line Homo sapiens CDC5L-human ENCAB348LKV DNA False 2016-07-28 ENCODE 2 ENCFF830THH 13251508 ENCODE Processing Pipeline 745156bb087213f29047bb2f064f26d1 https://www.encodeproject.org/files/ENCFF784NDM/@@download/ENCFF784NDM.bigBed hg19 released missing control alignments ENCFF643TEZ bed narrowPeak optimal idr thresholded peaks ENCSR121PFY ChIP-seq EFO:0002067 K562 cell line Homo sapiens CDC5L-human ENCAB348LKV DNA False 2016-07-28 ENCODE 1, 2 ENCFF001TDO, ENCFF108JTM, ENCFF361EMP, ENCFF830THH 110168 ENCODE Processing Pipeline 88bb8380a704122b98e88220e68c0d21 https://www.encodeproject.org/files/ENCFF643TEZ/@@download/ENCFF643TEZ.bed.gz hg19 released missing control alignments ENCFF181MGL bigBed narrowPeak optimal idr thresholded peaks ENCSR121PFY ChIP-seq EFO:0002067 K562 cell line Homo sapiens CDC5L-human ENCAB348LKV DNA False 2016-07-28 ENCODE 1, 2 ENCFF643TEZ 297246 ENCODE Processing Pipeline ecd15f5e100aa2276ef8be42dc47c1c8 https://www.encodeproject.org/files/ENCFF181MGL/@@download/ENCFF181MGL.bigBed hg19 released missing control alignments ENCFF357YDT bam unfiltered alignments ENCSR121PFY ChIP-seq EFO:0002067 K562 cell line Homo sapiens CDC5L-human ENCAB348LKV DNA False 2016-07-28 ENCODE 2 100 ENCFF146CPM, ENCFF643CGH, ENCFF899BAM 4387689463 ENCODE Processing Pipeline 6e80befe023b7aabab81ba6e2a6d69d5 https://www.encodeproject.org/files/ENCFF357YDT/@@download/ENCFF357YDT.bam GRCh38 released missing control alignments ENCFF014PIX bam unfiltered alignments ENCSR121PFY ChIP-seq EFO:0002067 K562 cell line Homo sapiens CDC5L-human ENCAB348LKV DNA False 2016-07-28 ENCODE 1 100 ENCFF300KRT, ENCFF643CGH, ENCFF847ZNJ 4457559555 ENCODE Processing Pipeline caff5b073108054aa46fecab71ba78e2 https://www.encodeproject.org/files/ENCFF014PIX/@@download/ENCFF014PIX.bam GRCh38 released missing control alignments ENCFF201MXQ bam alignments ENCSR121PFY ChIP-seq EFO:0002067 K562 cell line Homo sapiens CDC5L-human ENCAB348LKV DNA False 2016-07-28 ENCODE 1 100 ENCFF300KRT, ENCFF643CGH, ENCFF847ZNJ 3817513034 ENCODE Processing Pipeline 5f63e668f1b0d55856336b4b5a1d2460 https://www.encodeproject.org/files/ENCFF201MXQ/@@download/ENCFF201MXQ.bam GRCh38 released missing control alignments ENCFF049RJI bam alignments ENCSR121PFY ChIP-seq EFO:0002067 K562 cell line Homo sapiens CDC5L-human ENCAB348LKV DNA False 2016-07-28 ENCODE 2 100 ENCFF146CPM, ENCFF643CGH, ENCFF899BAM 3694262336 ENCODE Processing Pipeline 2490bae5c0593f80cbaf034af720b459 https://www.encodeproject.org/files/ENCFF049RJI/@@download/ENCFF049RJI.bam GRCh38 released missing control alignments ENCFF599NAO bigWig signal p-value ENCSR121PFY ChIP-seq EFO:0002067 K562 cell line Homo sapiens CDC5L-human ENCAB348LKV DNA False 2016-07-28 ENCODE 1 ENCFF201MXQ 986225200 ENCODE Processing Pipeline af01b36387d7e1db0ca3bd67f5da47f9 https://www.encodeproject.org/files/ENCFF599NAO/@@download/ENCFF599NAO.bigWig GRCh38 released missing control alignments ENCFF823AWQ bigWig signal p-value ENCSR121PFY ChIP-seq EFO:0002067 K562 cell line Homo sapiens CDC5L-human ENCAB348LKV DNA False 2016-07-28 ENCODE 2 ENCFF049RJI 1084297233 ENCODE Processing Pipeline aa14f40916ea320bd3a213a27de36e04 https://www.encodeproject.org/files/ENCFF823AWQ/@@download/ENCFF823AWQ.bigWig GRCh38 released missing control alignments ENCFF785SNQ bigWig signal p-value ENCSR121PFY ChIP-seq EFO:0002067 K562 cell line Homo sapiens CDC5L-human ENCAB348LKV DNA False 2016-07-28 ENCODE 1, 2 ENCFF049RJI, ENCFF201MXQ 1771019759 ENCODE Processing Pipeline bb455e516dbba71f73f2b92dc6ef315e https://www.encodeproject.org/files/ENCFF785SNQ/@@download/ENCFF785SNQ.bigWig GRCh38 released missing control alignments ENCFF113UDB bigWig fold change over control ENCSR121PFY ChIP-seq EFO:0002067 K562 cell line Homo sapiens CDC5L-human ENCAB348LKV DNA False 2016-07-28 ENCODE 1 ENCFF201MXQ 1137686255 ENCODE Processing Pipeline 21eaf0f79cba7c4b14093312c84e8473 https://www.encodeproject.org/files/ENCFF113UDB/@@download/ENCFF113UDB.bigWig GRCh38 released missing control alignments ENCFF595ODW bigWig fold change over control ENCSR121PFY ChIP-seq EFO:0002067 K562 cell line Homo sapiens CDC5L-human ENCAB348LKV DNA False 2016-07-28 ENCODE 2 ENCFF049RJI 1083314893 ENCODE Processing Pipeline a1cd4b5d76cd5ef492bedee53ffd4062 https://www.encodeproject.org/files/ENCFF595ODW/@@download/ENCFF595ODW.bigWig GRCh38 released missing control alignments ENCFF738RCM bigWig fold change over control ENCSR121PFY ChIP-seq EFO:0002067 K562 cell line Homo sapiens CDC5L-human ENCAB348LKV DNA False 2016-07-28 ENCODE 1, 2 ENCFF049RJI, ENCFF201MXQ 2053047493 ENCODE Processing Pipeline 9a67ef05fb695f22d07342df0c6cb0c5 https://www.encodeproject.org/files/ENCFF738RCM/@@download/ENCFF738RCM.bigWig GRCh38 released missing control alignments ENCFF037YLO bed narrowPeak peaks ENCSR121PFY ChIP-seq EFO:0002067 K562 cell line Homo sapiens CDC5L-human ENCAB348LKV DNA False 2016-07-28 ENCODE 1 ENCFF201MXQ 6471171 ENCODE Processing Pipeline b13e77a8ec9e9df200bf03f48cdec82f https://www.encodeproject.org/files/ENCFF037YLO/@@download/ENCFF037YLO.bed.gz GRCh38 released missing control alignments ENCFF474XWG bed narrowPeak peaks ENCSR121PFY ChIP-seq EFO:0002067 K562 cell line Homo sapiens CDC5L-human ENCAB348LKV DNA False 2016-07-28 ENCODE 2 ENCFF049RJI 6439941 ENCODE Processing Pipeline 6a74e53dc7a0371df3a3a792014f3e41 https://www.encodeproject.org/files/ENCFF474XWG/@@download/ENCFF474XWG.bed.gz GRCh38 released missing control alignments ENCFF214AZP bed narrowPeak peaks ENCSR121PFY ChIP-seq EFO:0002067 K562 cell line Homo sapiens CDC5L-human ENCAB348LKV DNA False 2016-07-28 ENCODE 1, 2 ENCFF049RJI, ENCFF201MXQ 7187945 ENCODE Processing Pipeline 7b39406b31830920a9c3fc490e67ab97 https://www.encodeproject.org/files/ENCFF214AZP/@@download/ENCFF214AZP.bed.gz GRCh38 released missing control alignments ENCFF641MRH bigBed narrowPeak peaks ENCSR121PFY ChIP-seq EFO:0002067 K562 cell line Homo sapiens CDC5L-human ENCAB348LKV DNA False 2016-07-28 ENCODE 1 ENCFF037YLO 13263540 ENCODE Processing Pipeline 1f05094d207527389e5d0a86406f7569 https://www.encodeproject.org/files/ENCFF641MRH/@@download/ENCFF641MRH.bigBed GRCh38 released missing control alignments ENCFF486BQA bigBed narrowPeak peaks ENCSR121PFY ChIP-seq EFO:0002067 K562 cell line Homo sapiens CDC5L-human ENCAB348LKV DNA False 2016-07-28 ENCODE 2 ENCFF474XWG 13259116 ENCODE Processing Pipeline 191e537cd4ba288488bddb7d49fcf9b0 https://www.encodeproject.org/files/ENCFF486BQA/@@download/ENCFF486BQA.bigBed GRCh38 released missing control alignments ENCFF715XXQ bigBed narrowPeak peaks ENCSR121PFY ChIP-seq EFO:0002067 K562 cell line Homo sapiens CDC5L-human ENCAB348LKV DNA False 2016-07-28 ENCODE 1, 2 ENCFF214AZP 13083074 ENCODE Processing Pipeline 596db3cead4f48510722eb482cbaf014 https://www.encodeproject.org/files/ENCFF715XXQ/@@download/ENCFF715XXQ.bigBed GRCh38 released missing control alignments ENCFF575VHZ bed narrowPeak conservative idr thresholded peaks ENCSR121PFY ChIP-seq EFO:0002067 K562 cell line Homo sapiens CDC5L-human ENCAB348LKV DNA False 2016-07-28 ENCODE 1, 2 ENCFF037YLO, ENCFF214AZP, ENCFF419RSJ, ENCFF474XWG 74731 ENCODE Processing Pipeline 08d5ef79db4c86cb32b7263283fa881e https://www.encodeproject.org/files/ENCFF575VHZ/@@download/ENCFF575VHZ.bed.gz GRCh38 released missing control alignments ENCFF303KZO bigBed narrowPeak conservative idr thresholded peaks ENCSR121PFY ChIP-seq EFO:0002067 K562 cell line Homo sapiens CDC5L-human ENCAB348LKV DNA False 2016-07-28 ENCODE 1, 2 ENCFF575VHZ 197299 ENCODE Processing Pipeline 8c4f479afa2ac55e596a8936bbb058cc https://www.encodeproject.org/files/ENCFF303KZO/@@download/ENCFF303KZO.bigBed GRCh38 released missing control alignments ENCFF384ALH bed narrowPeak optimal idr thresholded peaks ENCSR121PFY ChIP-seq EFO:0002067 K562 cell line Homo sapiens CDC5L-human ENCAB348LKV DNA False 2016-07-28 ENCODE 1, 2 ENCFF037YLO, ENCFF214AZP, ENCFF419RSJ, ENCFF474XWG 111921 ENCODE Processing Pipeline 3e1236ba63044fac20b89dfacb9f2191 https://www.encodeproject.org/files/ENCFF384ALH/@@download/ENCFF384ALH.bed.gz GRCh38 released missing control alignments ENCFF274OEQ bigBed narrowPeak optimal idr thresholded peaks ENCSR121PFY ChIP-seq EFO:0002067 K562 cell line Homo sapiens CDC5L-human ENCAB348LKV DNA False 2016-07-28 ENCODE 1, 2 ENCFF384ALH 303169 ENCODE Processing Pipeline 75e797b38cdb5a48e399c80b75c9a35f https://www.encodeproject.org/files/ENCFF274OEQ/@@download/ENCFF274OEQ.bigBed GRCh38 released missing control alignments ENCFF000YXW bam alignments ENCSR000FAD ChIP-seq EFO:0002067 K562 cell line Homo sapiens RAD21-human ENCAB000AKG DNA see document see document False 2011-10-29 ENCODE 1 ENCFF000YYL 465852176 Sherman Weissman, Yale 94c1159522885c017235571890cc342c https://www.encodeproject.org/files/ENCFF000YXW/@@download/ENCFF000YXW.bam hg19 released biological replicates with identical biosample insufficient read length ENCFF000YXX bam alignments ENCSR000FAD ChIP-seq EFO:0002067 K562 cell line Homo sapiens RAD21-human ENCAB000AKG DNA see document see document False 2011-10-29 ENCODE 2 ENCFF000YYR 450889301 Sherman Weissman, Yale 7f5c811793a97f48564b77337c815993 https://www.encodeproject.org/files/ENCFF000YXX/@@download/ENCFF000YXX.bam hg19 released biological replicates with identical biosample insufficient read length ENCFF000YXY bigBed narrowPeak peaks ENCSR000FAD ChIP-seq EFO:0002067 K562 cell line Homo sapiens RAD21-human ENCAB000AKG DNA see document see document False 2011-10-29 ENCODE ENCFF001VOM 571256 Sherman Weissman, Yale 8a3531e6ff2fc0f6b00ab32566cc89a5 https://www.encodeproject.org/files/ENCFF000YXY/@@download/ENCFF000YXY.bigBed hg19 released biological replicates with identical biosample insufficient read length ENCFF000YXZ bigWig signal ENCSR000FAD ChIP-seq EFO:0002067 K562 cell line Homo sapiens RAD21-human ENCAB000AKG DNA see document see document False 2011-10-29 ENCODE 318543029 Sherman Weissman, Yale 1b4ca781ee370e3c899ba9ea38e0fdb8 https://www.encodeproject.org/files/ENCFF000YXZ/@@download/ENCFF000YXZ.bigWig hg19 released biological replicates with identical biosample, missing derived_from insufficient read length ENCFF000YYL fastq reads ENCSR000FAD ChIP-seq EFO:0002067 K562 cell line Homo sapiens RAD21-human ENCAB000AKG DNA see document see document False 2011-10-29 ENCODE 1 1 34 single-ended 378214326 Sherman Weissman, Yale 486fce091f2146881d670c5c19f27a8b https://www.encodeproject.org/files/ENCFF000YYL/@@download/ENCFF000YYL.fastq.gz Illumina Genome Analyzer released biological replicates with identical biosample insufficient read length, missing controlled_by ENCFF000YYR fastq reads ENCSR000FAD ChIP-seq EFO:0002067 K562 cell line Homo sapiens RAD21-human ENCAB000AKG DNA see document see document False 2011-10-29 ENCODE 2 1 34 single-ended 366377744 Sherman Weissman, Yale 3517a7473224b6548a0d0e8fbb30b0ef https://www.encodeproject.org/files/ENCFF000YYR/@@download/ENCFF000YYR.fastq.gz Illumina Genome Analyzer released biological replicates with identical biosample insufficient read length, missing controlled_by ENCFF001VOM bed narrowPeak peaks ENCSR000FAD ChIP-seq EFO:0002067 K562 cell line Homo sapiens RAD21-human ENCAB000AKG DNA see document see document False 2011-10-29 ENCODE 264510 Sherman Weissman, Yale 31e26aa8be8f75f6f0ebfbc12e2a904f https://www.encodeproject.org/files/ENCFF001VOM/@@download/ENCFF001VOM.bed.gz hg19 released biological replicates with identical biosample, missing derived_from insufficient read length ENCFF002CXU bed narrowPeak optimal idr thresholded peaks ENCSR000FAD ChIP-seq EFO:0002067 K562 cell line Homo sapiens RAD21-human ENCAB000AKG DNA see document see document False 2011-10-29 ENCODE 367853 ENCODE Consortium Analysis Working Group 37b2c03ce75692dc617fa321d3f65c51 https://www.encodeproject.org/files/ENCFF002CXU/@@download/ENCFF002CXU.bed.gz hg19 released biological replicates with identical biosample, missing derived_from insufficient read length ENCFF051EOV bigBed narrowPeak optimal idr thresholded peaks ENCSR000FAD ChIP-seq EFO:0002067 K562 cell line Homo sapiens RAD21-human ENCAB000AKG DNA see document see document False 2011-10-29 ENCODE ENCFF002CXU 715973 ENCODE Consortium 17acbd33689750b9086d7dc6506d79c4 https://www.encodeproject.org/files/ENCFF051EOV/@@download/ENCFF051EOV.bigBed hg19 released biological replicates with identical biosample insufficient read length ENCFF344MHB bam unfiltered alignments ENCSR159OCC ChIP-seq EFO:0002067 K562 cell line Homo sapiens FLAG-ATF1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 2 50 ENCFF148LLM, ENCFF807MUK 1081491468 ENCODE Processing Pipeline a1e0e72db05addb795b5ef20012cf844 https://www.encodeproject.org/files/ENCFF344MHB/@@download/ENCFF344MHB.bam hg19 released missing genetic modification characterization characterization(s) pending review ENCFF228HJC bam unfiltered alignments ENCSR159OCC ChIP-seq EFO:0002067 K562 cell line Homo sapiens FLAG-ATF1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1 50 ENCFF444VXB, ENCFF807MUK 1622625253 ENCODE Processing Pipeline 29c6afe7082e86dca0b77d83b3563da5 https://www.encodeproject.org/files/ENCFF228HJC/@@download/ENCFF228HJC.bam hg19 released missing genetic modification characterization characterization(s) pending review ENCFF444VXB fastq reads ENCSR159OCC ChIP-seq EFO:0002067 K562 cell line Homo sapiens FLAG-ATF1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1 1 50 single-ended 1424430661 Richard Myers, HAIB a30eb74a9bb664d077719d5edc543152 SRA:SRR5331338 https://www.encodeproject.org/files/ENCFF444VXB/@@download/ENCFF444VXB.fastq.gz Illumina HiSeq 2000 /files/ENCFF001RVO/ released missing genetic modification characterization characterization(s) pending review ENCFF148LLM fastq reads ENCSR159OCC ChIP-seq EFO:0002067 K562 cell line Homo sapiens FLAG-ATF1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 2 1 50 single-ended 949258970 Richard Myers, HAIB 7eb8e18050aa09affa4673093b507e06 SRA:SRR5331339 https://www.encodeproject.org/files/ENCFF148LLM/@@download/ENCFF148LLM.fastq.gz Illumina HiSeq 2000 /files/ENCFF001RVO/ released missing genetic modification characterization characterization(s) pending review ENCFF837QKV bam alignments ENCSR159OCC ChIP-seq EFO:0002067 K562 cell line Homo sapiens FLAG-ATF1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 2 ENCFF148LLM, ENCFF807MUK 823240766 ENCODE Processing Pipeline 619184733e70810c450003543a87cbd0 https://www.encodeproject.org/files/ENCFF837QKV/@@download/ENCFF837QKV.bam hg19 released missing genetic modification characterization characterization(s) pending review ENCFF447TYF bam alignments ENCSR159OCC ChIP-seq EFO:0002067 K562 cell line Homo sapiens FLAG-ATF1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1 ENCFF444VXB, ENCFF807MUK 1228720682 ENCODE Processing Pipeline d143a470edb4f209f216e736148a3fe6 https://www.encodeproject.org/files/ENCFF447TYF/@@download/ENCFF447TYF.bam hg19 released missing genetic modification characterization characterization(s) pending review ENCFF665DEC bigWig signal p-value ENCSR159OCC ChIP-seq EFO:0002067 K562 cell line Homo sapiens FLAG-ATF1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1 ENCFF061QOJ, ENCFF447TYF 818307379 ENCODE Processing Pipeline b7bcace9977feb12400659cc6f2dc27e https://www.encodeproject.org/files/ENCFF665DEC/@@download/ENCFF665DEC.bigWig hg19 released missing genetic modification characterization characterization(s) pending review ENCFF034UVN bigWig signal p-value ENCSR159OCC ChIP-seq EFO:0002067 K562 cell line Homo sapiens FLAG-ATF1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 2 ENCFF061QOJ, ENCFF837QKV 692121119 ENCODE Processing Pipeline c62788d22895a531ea664494f6327314 https://www.encodeproject.org/files/ENCFF034UVN/@@download/ENCFF034UVN.bigWig hg19 released missing genetic modification characterization characterization(s) pending review ENCFF659EGI bigWig signal p-value ENCSR159OCC ChIP-seq EFO:0002067 K562 cell line Homo sapiens FLAG-ATF1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF061QOJ, ENCFF447TYF, ENCFF837QKV 982271092 ENCODE Processing Pipeline c29f87f10da103d2a62c0daf7fa448cc https://www.encodeproject.org/files/ENCFF659EGI/@@download/ENCFF659EGI.bigWig hg19 released missing genetic modification characterization characterization(s) pending review ENCFF869DSO bigWig fold change over control ENCSR159OCC ChIP-seq EFO:0002067 K562 cell line Homo sapiens FLAG-ATF1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1 ENCFF061QOJ, ENCFF447TYF 691060708 ENCODE Processing Pipeline 0cccdbbb5876832042a891a8b51a16fb https://www.encodeproject.org/files/ENCFF869DSO/@@download/ENCFF869DSO.bigWig hg19 released missing genetic modification characterization characterization(s) pending review ENCFF901VBK bigWig fold change over control ENCSR159OCC ChIP-seq EFO:0002067 K562 cell line Homo sapiens FLAG-ATF1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 2 ENCFF061QOJ, ENCFF837QKV 520838732 ENCODE Processing Pipeline 16107d557cf83dfdd9f58b13c9c6b6cd https://www.encodeproject.org/files/ENCFF901VBK/@@download/ENCFF901VBK.bigWig hg19 released missing genetic modification characterization characterization(s) pending review ENCFF145VGS bigWig fold change over control ENCSR159OCC ChIP-seq EFO:0002067 K562 cell line Homo sapiens FLAG-ATF1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF061QOJ, ENCFF447TYF, ENCFF837QKV 1014669057 ENCODE Processing Pipeline 82ae224bdfa99b2942489016e158ce83 https://www.encodeproject.org/files/ENCFF145VGS/@@download/ENCFF145VGS.bigWig hg19 released missing genetic modification characterization characterization(s) pending review ENCFF551NSK bigBed narrowPeak peaks ENCSR159OCC ChIP-seq EFO:0002067 K562 cell line Homo sapiens FLAG-ATF1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF089SHU 11669879 ENCODE Processing Pipeline d9002da885e85f58e5a91eb5d50cbc82 https://www.encodeproject.org/files/ENCFF551NSK/@@download/ENCFF551NSK.bigBed hg19 released missing genetic modification characterization characterization(s) pending review ENCFF948LKX bed narrowPeak conservative idr thresholded peaks ENCSR159OCC ChIP-seq EFO:0002067 K562 cell line Homo sapiens FLAG-ATF1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF001TDO, ENCFF089SHU, ENCFF189NGD, ENCFF624BVW 61161 ENCODE Processing Pipeline 6bf4211ebb28bb585bfed486973ea06c https://www.encodeproject.org/files/ENCFF948LKX/@@download/ENCFF948LKX.bed.gz hg19 released missing genetic modification characterization characterization(s) pending review ENCFF030HWZ bed narrowPeak optimal idr thresholded peaks ENCSR159OCC ChIP-seq EFO:0002067 K562 cell line Homo sapiens FLAG-ATF1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF001TDO, ENCFF089SHU, ENCFF189NGD, ENCFF624BVW 67700 ENCODE Processing Pipeline 31e9c7f935021b20bb5a136f5eb5d3e0 https://www.encodeproject.org/files/ENCFF030HWZ/@@download/ENCFF030HWZ.bed.gz hg19 released missing genetic modification characterization characterization(s) pending review ENCFF189NGD bed narrowPeak peaks ENCSR159OCC ChIP-seq EFO:0002067 K562 cell line Homo sapiens FLAG-ATF1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 2 ENCFF061QOJ, ENCFF837QKV 4759023 ENCODE Processing Pipeline 886ecf5439e7455261cced5fc2c31058 https://www.encodeproject.org/files/ENCFF189NGD/@@download/ENCFF189NGD.bed.gz hg19 released missing genetic modification characterization characterization(s) pending review ENCFF624BVW bed narrowPeak peaks ENCSR159OCC ChIP-seq EFO:0002067 K562 cell line Homo sapiens FLAG-ATF1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1 ENCFF061QOJ, ENCFF447TYF 5039056 ENCODE Processing Pipeline e1727509e123689203fbeea3fbb815b8 https://www.encodeproject.org/files/ENCFF624BVW/@@download/ENCFF624BVW.bed.gz hg19 released missing genetic modification characterization characterization(s) pending review ENCFF991VTY bigBed narrowPeak peaks ENCSR159OCC ChIP-seq EFO:0002067 K562 cell line Homo sapiens FLAG-ATF1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1 ENCFF624BVW 11158550 ENCODE Processing Pipeline a79f6aa2c62bbddb5b97dd684bfec63b https://www.encodeproject.org/files/ENCFF991VTY/@@download/ENCFF991VTY.bigBed hg19 released missing genetic modification characterization characterization(s) pending review ENCFF035SSG bigBed narrowPeak conservative idr thresholded peaks ENCSR159OCC ChIP-seq EFO:0002067 K562 cell line Homo sapiens FLAG-ATF1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF948LKX 166040 ENCODE Processing Pipeline a63a39fee248b5c1ce4d389bc69bfcb8 https://www.encodeproject.org/files/ENCFF035SSG/@@download/ENCFF035SSG.bigBed hg19 released missing genetic modification characterization characterization(s) pending review ENCFF089SHU bed narrowPeak peaks ENCSR159OCC ChIP-seq EFO:0002067 K562 cell line Homo sapiens FLAG-ATF1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF061QOJ, ENCFF447TYF, ENCFF837QKV 5945369 ENCODE Processing Pipeline f27db7e818966d03ddf8bbf524186d49 https://www.encodeproject.org/files/ENCFF089SHU/@@download/ENCFF089SHU.bed.gz hg19 released missing genetic modification characterization characterization(s) pending review ENCFF389TPP bigBed narrowPeak peaks ENCSR159OCC ChIP-seq EFO:0002067 K562 cell line Homo sapiens FLAG-ATF1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 2 ENCFF189NGD 11128592 ENCODE Processing Pipeline b6e5bcb3efe74e28ec5f90e2c430af19 https://www.encodeproject.org/files/ENCFF389TPP/@@download/ENCFF389TPP.bigBed hg19 released missing genetic modification characterization characterization(s) pending review ENCFF012AHM bigBed narrowPeak optimal idr thresholded peaks ENCSR159OCC ChIP-seq EFO:0002067 K562 cell line Homo sapiens FLAG-ATF1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF030HWZ 175269 ENCODE Processing Pipeline bc5229eea6797ee8f82bd4ef01a5a2cf https://www.encodeproject.org/files/ENCFF012AHM/@@download/ENCFF012AHM.bigBed hg19 released missing genetic modification characterization characterization(s) pending review ENCFF120BPS bam unfiltered alignments ENCSR159OCC ChIP-seq EFO:0002067 K562 cell line Homo sapiens FLAG-ATF1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 2 50 ENCFF148LLM, ENCFF643CGH 1085338929 ENCODE Processing Pipeline 2b0b18ed70277418069b62c2e1e669f2 https://www.encodeproject.org/files/ENCFF120BPS/@@download/ENCFF120BPS.bam GRCh38 released missing genetic modification characterization characterization(s) pending review ENCFF485ERR bam unfiltered alignments ENCSR159OCC ChIP-seq EFO:0002067 K562 cell line Homo sapiens FLAG-ATF1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1 50 ENCFF444VXB, ENCFF643CGH 1629386249 ENCODE Processing Pipeline 79b7c7f4fda16d0700a87794d022fa7e https://www.encodeproject.org/files/ENCFF485ERR/@@download/ENCFF485ERR.bam GRCh38 released missing genetic modification characterization characterization(s) pending review ENCFF515YFJ bam alignments ENCSR159OCC ChIP-seq EFO:0002067 K562 cell line Homo sapiens FLAG-ATF1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 2 50 ENCFF148LLM, ENCFF643CGH 822971267 ENCODE Processing Pipeline 64f6784e055c1386a57c0d0a6b6b9b7a https://www.encodeproject.org/files/ENCFF515YFJ/@@download/ENCFF515YFJ.bam GRCh38 released missing genetic modification characterization characterization(s) pending review ENCFF780DBH bam alignments ENCSR159OCC ChIP-seq EFO:0002067 K562 cell line Homo sapiens FLAG-ATF1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1 50 ENCFF444VXB, ENCFF643CGH 1228517931 ENCODE Processing Pipeline 73e313caca794c1a227168bdfba7ce93 https://www.encodeproject.org/files/ENCFF780DBH/@@download/ENCFF780DBH.bam GRCh38 released missing genetic modification characterization characterization(s) pending review ENCFF285JRI bigWig signal p-value ENCSR159OCC ChIP-seq EFO:0002067 K562 cell line Homo sapiens FLAG-ATF1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1 ENCFF332SVJ, ENCFF780DBH 769550741 ENCODE Processing Pipeline 5438033e27abc8f685209532dd422be3 https://www.encodeproject.org/files/ENCFF285JRI/@@download/ENCFF285JRI.bigWig GRCh38 released missing genetic modification characterization characterization(s) pending review ENCFF488MSR bigWig signal p-value ENCSR159OCC ChIP-seq EFO:0002067 K562 cell line Homo sapiens FLAG-ATF1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 2 ENCFF332SVJ, ENCFF515YFJ 739350011 ENCODE Processing Pipeline 04939564d73798786c9d97b1b6dfddfe https://www.encodeproject.org/files/ENCFF488MSR/@@download/ENCFF488MSR.bigWig GRCh38 released missing genetic modification characterization characterization(s) pending review ENCFF953TOA bigWig signal p-value ENCSR159OCC ChIP-seq EFO:0002067 K562 cell line Homo sapiens FLAG-ATF1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF332SVJ, ENCFF515YFJ, ENCFF780DBH 983930397 ENCODE Processing Pipeline 7e22ed8246219011fd4300e03ba4c18d https://www.encodeproject.org/files/ENCFF953TOA/@@download/ENCFF953TOA.bigWig GRCh38 released missing genetic modification characterization characterization(s) pending review ENCFF171JNY bigWig fold change over control ENCSR159OCC ChIP-seq EFO:0002067 K562 cell line Homo sapiens FLAG-ATF1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1 ENCFF332SVJ, ENCFF780DBH 700648508 ENCODE Processing Pipeline 081b25efdab0f791f0a16b723032fdd3 https://www.encodeproject.org/files/ENCFF171JNY/@@download/ENCFF171JNY.bigWig GRCh38 released missing genetic modification characterization characterization(s) pending review ENCFF452EXE bigWig fold change over control ENCSR159OCC ChIP-seq EFO:0002067 K562 cell line Homo sapiens FLAG-ATF1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 2 ENCFF332SVJ, ENCFF515YFJ 529306262 ENCODE Processing Pipeline 469002d20c13c2913061fc356e622ed8 https://www.encodeproject.org/files/ENCFF452EXE/@@download/ENCFF452EXE.bigWig GRCh38 released missing genetic modification characterization characterization(s) pending review ENCFF278PDS bigWig fold change over control ENCSR159OCC ChIP-seq EFO:0002067 K562 cell line Homo sapiens FLAG-ATF1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF332SVJ, ENCFF515YFJ, ENCFF780DBH 1013486550 ENCODE Processing Pipeline 68c90d23a22bb4c9407bdcf665b582ab https://www.encodeproject.org/files/ENCFF278PDS/@@download/ENCFF278PDS.bigWig GRCh38 released missing genetic modification characterization characterization(s) pending review ENCFF522YTF bed narrowPeak peaks ENCSR159OCC ChIP-seq EFO:0002067 K562 cell line Homo sapiens FLAG-ATF1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1 ENCFF332SVJ, ENCFF780DBH 4783025 ENCODE Processing Pipeline 996eed7efbed03b85dcddfb59399286a https://www.encodeproject.org/files/ENCFF522YTF/@@download/ENCFF522YTF.bed.gz GRCh38 released missing genetic modification characterization characterization(s) pending review ENCFF217XJC bigBed narrowPeak optimal idr thresholded peaks ENCSR159OCC ChIP-seq EFO:0002067 K562 cell line Homo sapiens FLAG-ATF1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF715PLB 173216 ENCODE Processing Pipeline 7990f17d421b086c32ae971436ac0cac https://www.encodeproject.org/files/ENCFF217XJC/@@download/ENCFF217XJC.bigBed GRCh38 released missing genetic modification characterization characterization(s) pending review ENCFF313YNI bed narrowPeak peaks ENCSR159OCC ChIP-seq EFO:0002067 K562 cell line Homo sapiens FLAG-ATF1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF332SVJ, ENCFF515YFJ, ENCFF780DBH 5665303 ENCODE Processing Pipeline e3738c7722a7a14f582bf9e13eff43c0 https://www.encodeproject.org/files/ENCFF313YNI/@@download/ENCFF313YNI.bed.gz GRCh38 released missing genetic modification characterization characterization(s) pending review ENCFF929LAL bigBed narrowPeak conservative idr thresholded peaks ENCSR159OCC ChIP-seq EFO:0002067 K562 cell line Homo sapiens FLAG-ATF1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF539RBU 167266 ENCODE Processing Pipeline ec5938c3625897d9b48bc0c6df40b784 https://www.encodeproject.org/files/ENCFF929LAL/@@download/ENCFF929LAL.bigBed GRCh38 released missing genetic modification characterization characterization(s) pending review ENCFF644UJA bed narrowPeak peaks ENCSR159OCC ChIP-seq EFO:0002067 K562 cell line Homo sapiens FLAG-ATF1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 2 ENCFF332SVJ, ENCFF515YFJ 4434443 ENCODE Processing Pipeline 7b187a58788511e2c520599628303b57 https://www.encodeproject.org/files/ENCFF644UJA/@@download/ENCFF644UJA.bed.gz GRCh38 released missing genetic modification characterization characterization(s) pending review ENCFF924IKO bigBed narrowPeak peaks ENCSR159OCC ChIP-seq EFO:0002067 K562 cell line Homo sapiens FLAG-ATF1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1 ENCFF522YTF 11061793 ENCODE Processing Pipeline 366369880c7b25304fe908262989d458 https://www.encodeproject.org/files/ENCFF924IKO/@@download/ENCFF924IKO.bigBed GRCh38 released missing genetic modification characterization characterization(s) pending review ENCFF676NKZ bigBed narrowPeak peaks ENCSR159OCC ChIP-seq EFO:0002067 K562 cell line Homo sapiens FLAG-ATF1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 2 ENCFF644UJA 10868759 ENCODE Processing Pipeline 54973137108c1e3aa25e3ee886d2ad11 https://www.encodeproject.org/files/ENCFF676NKZ/@@download/ENCFF676NKZ.bigBed GRCh38 released missing genetic modification characterization characterization(s) pending review ENCFF834FKS bigBed narrowPeak peaks ENCSR159OCC ChIP-seq EFO:0002067 K562 cell line Homo sapiens FLAG-ATF1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF313YNI 11648082 ENCODE Processing Pipeline 1e28f2899f250009580ef0ad134fcf07 https://www.encodeproject.org/files/ENCFF834FKS/@@download/ENCFF834FKS.bigBed GRCh38 released missing genetic modification characterization characterization(s) pending review ENCFF539RBU bed narrowPeak conservative idr thresholded peaks ENCSR159OCC ChIP-seq EFO:0002067 K562 cell line Homo sapiens FLAG-ATF1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF313YNI, ENCFF419RSJ, ENCFF522YTF, ENCFF644UJA 60685 ENCODE Processing Pipeline 4b8f00ffef20199a9dadd77f65ea9203 https://www.encodeproject.org/files/ENCFF539RBU/@@download/ENCFF539RBU.bed.gz GRCh38 released missing genetic modification characterization characterization(s) pending review ENCFF715PLB bed narrowPeak optimal idr thresholded peaks ENCSR159OCC ChIP-seq EFO:0002067 K562 cell line Homo sapiens FLAG-ATF1-human ENCAB697XQW DNA False 2016-06-14 ENCODE 1, 2 ENCFF313YNI, ENCFF419RSJ, ENCFF522YTF, ENCFF644UJA 64654 ENCODE Processing Pipeline a7aecaf01e510d88609e18f39450c557 https://www.encodeproject.org/files/ENCFF715PLB/@@download/ENCFF715PLB.bed.gz GRCh38 released missing genetic modification characterization characterization(s) pending review ENCFF000CAU bam alignments ENCSR000AQA ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM5B-human ENCAB000AJZ, ENCAB487VWD DNA see document see document False 2012-03-06 ENCODE 1 1 ENCFF000CBH 1166786786 Bradley Bernstein, Broad d44c18edc5f61d0719e805311a4369f7 https://www.encodeproject.org/files/ENCFF000CAU/@@download/ENCFF000CAU.bam hg19 archived control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length missing raw data in replicate insufficient replicate concordance ENCFF000CAV bam alignments ENCSR000AQA ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM5B-human ENCAB000AJZ, ENCAB487VWD DNA see document see document False 2012-03-06 ENCODE 1 2 ENCFF000CBM 841757091 Bradley Bernstein, Broad 98504c95d926dc10dba0039a9f24e3f8 https://www.encodeproject.org/files/ENCFF000CAV/@@download/ENCFF000CAV.bam hg19 archived control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length missing raw data in replicate insufficient replicate concordance ENCFF000CAW bigBed broadPeak peaks ENCSR000AQA ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM5B-human ENCAB000AJZ, ENCAB487VWD DNA see document see document False 2012-03-06 ENCODE ENCFF001SZY 3320545 Bradley Bernstein, Broad e487b9f8cd8d29a06c63b5ff697e3120 https://www.encodeproject.org/files/ENCFF000CAW/@@download/ENCFF000CAW.bigBed hg19 archived control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length missing raw data in replicate insufficient replicate concordance ENCFF000CBA bigWig signal ENCSR000AQA ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM5B-human ENCAB000AJZ, ENCAB487VWD DNA see document see document False 2012-03-06 ENCODE 440934987 Bradley Bernstein, Broad fe50d90e4411e030e1416d8dbb00ac30 https://www.encodeproject.org/files/ENCFF000CBA/@@download/ENCFF000CBA.bigWig hg19 archived control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length missing raw data in replicate, missing derived_from insufficient replicate concordance ENCFF000CBH fastq reads ENCSR000AQA ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM5B-human ENCAB000AJZ, ENCAB487VWD DNA see document see document False 2012-03-06 ENCODE 1 1 36 single-ended 1493548027 Bradley Bernstein, Broad 3e99a90cac0617130f822bb0b79373df https://www.encodeproject.org/files/ENCFF000CBH/@@download/ENCFF000CBH.fastq.gz Illumina Genome Analyzer /files/ENCFF000BWK/ released control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length missing raw data in replicate insufficient replicate concordance ENCFF000CBM fastq reads ENCSR000AQA ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM5B-human ENCAB000AJZ, ENCAB487VWD DNA see document see document False 2012-03-06 ENCODE 1 2 36 single-ended 1364757602 Bradley Bernstein, Broad c8db4b703fee6cd631ed5ba825e4f5ca https://www.encodeproject.org/files/ENCFF000CBM/@@download/ENCFF000CBM.fastq.gz Illumina Genome Analyzer /files/ENCFF000BWK/ released control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length missing raw data in replicate insufficient replicate concordance ENCFF001SZY bed broadPeak peaks ENCSR000AQA ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM5B-human ENCAB000AJZ, ENCAB487VWD DNA see document see document False 2012-03-06 ENCODE 2079441 Bradley Bernstein, Broad ec05d7c145c8a558b3937ff97bcc581d https://www.encodeproject.org/files/ENCFF001SZY/@@download/ENCFF001SZY.bed.gz hg19 archived control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length missing derived_from, missing raw data in replicate insufficient replicate concordance ENCFF002CES bed narrowPeak optimal idr thresholded peaks ENCSR000AQA ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM5B-human ENCAB000AJZ, ENCAB487VWD DNA see document see document False 2012-03-06 ENCODE 369147 ENCODE Consortium Analysis Working Group 86b81d77fa5dc25665ce55080ea5a16e https://www.encodeproject.org/files/ENCFF002CES/@@download/ENCFF002CES.bed.gz hg19 archived control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length missing derived_from, missing raw data in replicate insufficient replicate concordance ENCFF720HWG bigBed narrowPeak optimal idr thresholded peaks ENCSR000AQA ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM5B-human ENCAB000AJZ, ENCAB487VWD DNA see document see document False 2012-03-06 ENCODE ENCFF002CES 1020821 ENCODE Consortium 43c29c268075ea8a8e0d6bdba81cfdb4 https://www.encodeproject.org/files/ENCFF720HWG/@@download/ENCFF720HWG.bigBed hg19 archived control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length missing raw data in replicate insufficient replicate concordance ENCFF137VMP fastq reads ENCSR000AQA ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM5B-human ENCAB000AJZ, ENCAB487VWD DNA see document see document False 2012-03-06 ENCODE 2 1 36 single-ended 518319748 Bradley Bernstein, Broad 95831a573306940f3b78c76093f971b1 https://www.encodeproject.org/files/ENCFF137VMP/@@download/ENCFF137VMP.fastq.gz Illumina HiSeq 2500 /files/ENCFF283HQV/, /files/ENCFF994FIB/ released control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length missing raw data in replicate insufficient replicate concordance ENCFF900XIK fastq reads ENCSR000AQA ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM5B-human ENCAB000AJZ, ENCAB487VWD DNA see document see document False 2012-03-06 ENCODE 3 1 76 single-ended 1724844621 Bradley Bernstein, Broad f04b81792885e668ad5780d23198d223 https://www.encodeproject.org/files/ENCFF900XIK/@@download/ENCFF900XIK.fastq.gz Illumina HiSeq 2500 archived control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length missing raw data in replicate insufficient replicate concordance, missing controlled_by ENCFF712FGN bam unfiltered alignments ENCSR000AQA ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM5B-human ENCAB000AJZ, ENCAB487VWD DNA see document see document False 2012-03-06 ENCODE 2 36 ENCFF137VMP, ENCFF643CGH 737845421 ENCODE Processing Pipeline ca9c8d3b8e18949bcea3887cf16ec486 https://www.encodeproject.org/files/ENCFF712FGN/@@download/ENCFF712FGN.bam GRCh38 released control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length missing raw data in replicate insufficient replicate concordance ENCFF529ZVO bam alignments ENCSR000AQA ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM5B-human ENCAB000AJZ, ENCAB487VWD DNA see document see document False 2012-03-06 ENCODE 2 36 ENCFF137VMP, ENCFF643CGH 432824575 ENCODE Processing Pipeline 34bfbe69f797dd0fc145d27df5fb7cab https://www.encodeproject.org/files/ENCFF529ZVO/@@download/ENCFF529ZVO.bam GRCh38 released control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length missing raw data in replicate insufficient replicate concordance ENCFF873CAZ bam unfiltered alignments ENCSR000AQA ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM5B-human ENCAB000AJZ, ENCAB487VWD DNA see document see document False 2012-03-06 ENCODE 1 36 ENCFF000CBH, ENCFF000CBM, ENCFF643CGH 3467434586 ENCODE Processing Pipeline c84e58caf39893ceebdbddf47b86826d https://www.encodeproject.org/files/ENCFF873CAZ/@@download/ENCFF873CAZ.bam GRCh38 released control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length missing raw data in replicate insufficient replicate concordance ENCFF915BFX bam alignments ENCSR000AQA ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM5B-human ENCAB000AJZ, ENCAB487VWD DNA see document see document False 2012-03-06 ENCODE 1 36 ENCFF000CBH, ENCFF000CBM, ENCFF643CGH 1422614432 ENCODE Processing Pipeline 06be902ca481596d1f8c431dc733fb49 https://www.encodeproject.org/files/ENCFF915BFX/@@download/ENCFF915BFX.bam GRCh38 released control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length missing raw data in replicate insufficient replicate concordance ENCFF232ZEG bam unfiltered alignments ENCSR000AQA ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM5B-human ENCAB000AJZ, ENCAB487VWD DNA see document see document False 2012-03-06 ENCODE 2 36 ENCFF137VMP, ENCFF807MUK 732702853 ENCODE Processing Pipeline 568db45df9553f3bde6b4c5fa0960ec5 https://www.encodeproject.org/files/ENCFF232ZEG/@@download/ENCFF232ZEG.bam hg19 released control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length missing raw data in replicate insufficient replicate concordance ENCFF508VRU bam alignments ENCSR000AQA ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM5B-human ENCAB000AJZ, ENCAB487VWD DNA see document see document False 2012-03-06 ENCODE 2 36 ENCFF137VMP, ENCFF807MUK 433147837 ENCODE Processing Pipeline 8c39133b38b080aa8a2ad678995db4ec https://www.encodeproject.org/files/ENCFF508VRU/@@download/ENCFF508VRU.bam hg19 released control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length missing raw data in replicate insufficient replicate concordance ENCFF707IOX bam unfiltered alignments ENCSR000AQA ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM5B-human ENCAB000AJZ, ENCAB487VWD DNA see document see document False 2012-03-06 ENCODE 1 36 ENCFF000CBH, ENCFF000CBM, ENCFF807MUK 3452802796 ENCODE Processing Pipeline bf65eed6f6d61575c32c259dab8ba563 https://www.encodeproject.org/files/ENCFF707IOX/@@download/ENCFF707IOX.bam hg19 released control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length missing raw data in replicate insufficient replicate concordance ENCFF968GEX bam alignments ENCSR000AQA ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM5B-human ENCAB000AJZ, ENCAB487VWD DNA see document see document False 2012-03-06 ENCODE 1 36 ENCFF000CBH, ENCFF000CBM, ENCFF807MUK 1423731040 ENCODE Processing Pipeline 7dff9c965bdb1b448821524ad09d479a https://www.encodeproject.org/files/ENCFF968GEX/@@download/ENCFF968GEX.bam hg19 released control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length missing raw data in replicate insufficient replicate concordance ENCFF918ZEJ bigWig signal p-value ENCSR000AQA ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM5B-human ENCAB000AJZ, ENCAB487VWD DNA see document see document False 2012-03-06 ENCODE 1 ENCFF392XRJ, ENCFF829HZY, ENCFF915BFX 561147824 ENCODE Processing Pipeline a9b17271b25ae61e87e29cc104efa62f https://www.encodeproject.org/files/ENCFF918ZEJ/@@download/ENCFF918ZEJ.bigWig GRCh38 released control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length missing raw data in replicate insufficient replicate concordance ENCFF686LQB bigWig signal p-value ENCSR000AQA ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM5B-human ENCAB000AJZ, ENCAB487VWD DNA see document see document False 2012-03-06 ENCODE 1 ENCFF245PJA, ENCFF574XYY, ENCFF968GEX 590665320 ENCODE Processing Pipeline ab5f357e6bba5e525a34d781b1186a36 https://www.encodeproject.org/files/ENCFF686LQB/@@download/ENCFF686LQB.bigWig hg19 released control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length missing raw data in replicate insufficient replicate concordance ENCFF910RDO bigWig fold change over control ENCSR000AQA ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM5B-human ENCAB000AJZ, ENCAB487VWD DNA see document see document False 2012-03-06 ENCODE 1 ENCFF392XRJ, ENCFF829HZY, ENCFF915BFX 525103888 ENCODE Processing Pipeline d718f896b27036b87bf73550abd59dae https://www.encodeproject.org/files/ENCFF910RDO/@@download/ENCFF910RDO.bigWig GRCh38 released control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length missing raw data in replicate insufficient replicate concordance ENCFF814JBU bigWig fold change over control ENCSR000AQA ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM5B-human ENCAB000AJZ, ENCAB487VWD DNA see document see document False 2012-03-06 ENCODE 1 ENCFF245PJA, ENCFF574XYY, ENCFF968GEX 517224077 ENCODE Processing Pipeline 9ff1652b2b52ca863db4defe7015c3e5 https://www.encodeproject.org/files/ENCFF814JBU/@@download/ENCFF814JBU.bigWig hg19 released control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length missing raw data in replicate insufficient replicate concordance ENCFF884ZRY bigWig signal p-value ENCSR000AQA ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM5B-human ENCAB000AJZ, ENCAB487VWD DNA see document see document False 2012-03-06 ENCODE 1, 2 ENCFF392XRJ, ENCFF529ZVO, ENCFF829HZY, ENCFF915BFX 661763404 ENCODE Processing Pipeline 64420317dbb55616c5070277fc386214 https://www.encodeproject.org/files/ENCFF884ZRY/@@download/ENCFF884ZRY.bigWig GRCh38 released control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length missing raw data in replicate insufficient replicate concordance ENCFF574FSI bigWig signal p-value ENCSR000AQA ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM5B-human ENCAB000AJZ, ENCAB487VWD DNA see document see document False 2012-03-06 ENCODE 2 ENCFF245PJA, ENCFF508VRU 302568321 ENCODE Processing Pipeline 9cab78fabc185fd2555973566a2f6d1f https://www.encodeproject.org/files/ENCFF574FSI/@@download/ENCFF574FSI.bigWig hg19 released control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length missing raw data in replicate insufficient replicate concordance ENCFF334EYE bed narrowPeak peaks ENCSR000AQA ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM5B-human ENCAB000AJZ, ENCAB487VWD DNA see document see document False 2012-03-06 ENCODE 1 ENCFF392XRJ, ENCFF829HZY, ENCFF915BFX 6507653 ENCODE Processing Pipeline 17360aff5282fadbdaf170d7933f703b https://www.encodeproject.org/files/ENCFF334EYE/@@download/ENCFF334EYE.bed.gz GRCh38 released control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length missing raw data in replicate insufficient replicate concordance ENCFF454LRZ bigWig fold change over control ENCSR000AQA ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM5B-human ENCAB000AJZ, ENCAB487VWD DNA see document see document False 2012-03-06 ENCODE 2 ENCFF529ZVO, ENCFF829HZY 274523667 ENCODE Processing Pipeline 02b2c8ffe14ee3dff77dc79ff2562ec6 https://www.encodeproject.org/files/ENCFF454LRZ/@@download/ENCFF454LRZ.bigWig GRCh38 released control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length missing raw data in replicate insufficient replicate concordance ENCFF296MZN bed narrowPeak peaks ENCSR000AQA ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM5B-human ENCAB000AJZ, ENCAB487VWD DNA see document see document False 2012-03-06 ENCODE 1, 2 ENCFF392XRJ, ENCFF529ZVO, ENCFF829HZY, ENCFF915BFX 6759066 ENCODE Processing Pipeline b36f176dea912eace8aac61b36d59f08 https://www.encodeproject.org/files/ENCFF296MZN/@@download/ENCFF296MZN.bed.gz GRCh38 released control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length missing raw data in replicate insufficient replicate concordance ENCFF629JIS bed narrowPeak peaks ENCSR000AQA ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM5B-human ENCAB000AJZ, ENCAB487VWD DNA see document see document False 2012-03-06 ENCODE 1 ENCFF245PJA, ENCFF574XYY, ENCFF968GEX 6530562 ENCODE Processing Pipeline 5fddb2dafc4ceb20398de06505d31d68 https://www.encodeproject.org/files/ENCFF629JIS/@@download/ENCFF629JIS.bed.gz hg19 released control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length missing raw data in replicate insufficient replicate concordance ENCFF293III bigWig fold change over control ENCSR000AQA ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM5B-human ENCAB000AJZ, ENCAB487VWD DNA see document see document False 2012-03-06 ENCODE 1, 2 ENCFF245PJA, ENCFF508VRU, ENCFF574XYY, ENCFF968GEX 704822557 ENCODE Processing Pipeline 3659b31f47ef19040afb6154dfa185e5 https://www.encodeproject.org/files/ENCFF293III/@@download/ENCFF293III.bigWig hg19 released control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length missing raw data in replicate insufficient replicate concordance ENCFF998PSG bigWig signal p-value ENCSR000AQA ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM5B-human ENCAB000AJZ, ENCAB487VWD DNA see document see document False 2012-03-06 ENCODE 2 ENCFF529ZVO, ENCFF829HZY 307706756 ENCODE Processing Pipeline facfe4c2631d6add28a413bf65bb3bab https://www.encodeproject.org/files/ENCFF998PSG/@@download/ENCFF998PSG.bigWig GRCh38 released control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length missing raw data in replicate insufficient replicate concordance ENCFF587QLW bigWig fold change over control ENCSR000AQA ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM5B-human ENCAB000AJZ, ENCAB487VWD DNA see document see document False 2012-03-06 ENCODE 2 ENCFF245PJA, ENCFF508VRU 286085431 ENCODE Processing Pipeline bdd88c8acd0702f0acf710b94ac27480 https://www.encodeproject.org/files/ENCFF587QLW/@@download/ENCFF587QLW.bigWig hg19 released control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length missing raw data in replicate insufficient replicate concordance ENCFF455EXO bigWig signal p-value ENCSR000AQA ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM5B-human ENCAB000AJZ, ENCAB487VWD DNA see document see document False 2012-03-06 ENCODE 1, 2 ENCFF245PJA, ENCFF508VRU, ENCFF574XYY, ENCFF968GEX 657586728 ENCODE Processing Pipeline e075f934ddd92afd8c65a5fdb529868b https://www.encodeproject.org/files/ENCFF455EXO/@@download/ENCFF455EXO.bigWig hg19 released control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length missing raw data in replicate insufficient replicate concordance ENCFF253NQI bigWig fold change over control ENCSR000AQA ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM5B-human ENCAB000AJZ, ENCAB487VWD DNA see document see document False 2012-03-06 ENCODE 1, 2 ENCFF392XRJ, ENCFF529ZVO, ENCFF829HZY, ENCFF915BFX 711467505 ENCODE Processing Pipeline 4bb0f4790d0effe79f0b9953b154e2c5 https://www.encodeproject.org/files/ENCFF253NQI/@@download/ENCFF253NQI.bigWig GRCh38 released control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length missing raw data in replicate insufficient replicate concordance ENCFF604PEX bed narrowPeak peaks ENCSR000AQA ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM5B-human ENCAB000AJZ, ENCAB487VWD DNA see document see document False 2012-03-06 ENCODE 2 ENCFF529ZVO, ENCFF829HZY 4452898 ENCODE Processing Pipeline 08cf1d7680eb25c63175fe4f0c702aef https://www.encodeproject.org/files/ENCFF604PEX/@@download/ENCFF604PEX.bed.gz GRCh38 released control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length missing raw data in replicate insufficient replicate concordance ENCFF573OMT bed narrowPeak conservative idr thresholded peaks ENCSR000AQA ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM5B-human ENCAB000AJZ, ENCAB487VWD DNA see document see document False 2012-03-06 ENCODE 1, 2 ENCFF296MZN, ENCFF334EYE, ENCFF419RSJ, ENCFF604PEX 6809 ENCODE Processing Pipeline fe02d957bdc075288e2b2fa3ac5d9aac https://www.encodeproject.org/files/ENCFF573OMT/@@download/ENCFF573OMT.bed.gz GRCh38 released control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length missing raw data in replicate insufficient replicate concordance ENCFF781VIH bigBed narrowPeak peaks ENCSR000AQA ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM5B-human ENCAB000AJZ, ENCAB487VWD DNA see document see document False 2012-03-06 ENCODE 1 ENCFF334EYE 12931157 ENCODE Processing Pipeline 0b2dce156a4738064d61b344300d8169 https://www.encodeproject.org/files/ENCFF781VIH/@@download/ENCFF781VIH.bigBed GRCh38 released control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length missing raw data in replicate insufficient replicate concordance ENCFF016LIP bigBed narrowPeak peaks ENCSR000AQA ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM5B-human ENCAB000AJZ, ENCAB487VWD DNA see document see document False 2012-03-06 ENCODE 2 ENCFF604PEX 10596014 ENCODE Processing Pipeline 4c5c799e641a0d9173b3d88c191e22ab https://www.encodeproject.org/files/ENCFF016LIP/@@download/ENCFF016LIP.bigBed GRCh38 released control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length missing raw data in replicate insufficient replicate concordance ENCFF561MMC bigBed narrowPeak peaks ENCSR000AQA ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM5B-human ENCAB000AJZ, ENCAB487VWD DNA see document see document False 2012-03-06 ENCODE 1 ENCFF629JIS 12923258 ENCODE Processing Pipeline 5dd92db173ef4de1bf4687becad31609 https://www.encodeproject.org/files/ENCFF561MMC/@@download/ENCFF561MMC.bigBed hg19 released control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length missing raw data in replicate insufficient replicate concordance ENCFF202LXS bigBed narrowPeak peaks ENCSR000AQA ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM5B-human ENCAB000AJZ, ENCAB487VWD DNA see document see document False 2012-03-06 ENCODE 2 ENCFF106WXI 10596887 ENCODE Processing Pipeline 82b4fc66f818960f55a8ff4bc95fe66b https://www.encodeproject.org/files/ENCFF202LXS/@@download/ENCFF202LXS.bigBed hg19 released control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length missing raw data in replicate insufficient replicate concordance ENCFF299UWD bigBed narrowPeak optimal idr thresholded peaks ENCSR000AQA ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM5B-human ENCAB000AJZ, ENCAB487VWD DNA see document see document False 2012-03-06 ENCODE 1, 2 ENCFF668XLN 948867 ENCODE Processing Pipeline 6fb2cae9101dc6c3e515654828bd62f0 https://www.encodeproject.org/files/ENCFF299UWD/@@download/ENCFF299UWD.bigBed GRCh38 released control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length missing raw data in replicate insufficient replicate concordance ENCFF106WXI bed narrowPeak peaks ENCSR000AQA ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM5B-human ENCAB000AJZ, ENCAB487VWD DNA see document see document False 2012-03-06 ENCODE 2 ENCFF245PJA, ENCFF508VRU 4459629 ENCODE Processing Pipeline 28a4597f2f0ebdeb3dba733477d56e22 https://www.encodeproject.org/files/ENCFF106WXI/@@download/ENCFF106WXI.bed.gz hg19 released control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length missing raw data in replicate insufficient replicate concordance ENCFF866AOB bigBed narrowPeak conservative idr thresholded peaks ENCSR000AQA ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM5B-human ENCAB000AJZ, ENCAB487VWD DNA see document see document False 2012-03-06 ENCODE 1, 2 ENCFF573OMT 73703 ENCODE Processing Pipeline 3839fb7f91c82b84d11b63cfc9939c7d https://www.encodeproject.org/files/ENCFF866AOB/@@download/ENCFF866AOB.bigBed GRCh38 released control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length missing raw data in replicate insufficient replicate concordance ENCFF730XFE bigBed narrowPeak peaks ENCSR000AQA ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM5B-human ENCAB000AJZ, ENCAB487VWD DNA see document see document False 2012-03-06 ENCODE 1, 2 ENCFF758VGA 13034881 ENCODE Processing Pipeline 086dec9dff0b4ea90a3d2b83f4b82368 https://www.encodeproject.org/files/ENCFF730XFE/@@download/ENCFF730XFE.bigBed hg19 released control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length missing raw data in replicate insufficient replicate concordance ENCFF758VGA bed narrowPeak peaks ENCSR000AQA ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM5B-human ENCAB000AJZ, ENCAB487VWD DNA see document see document False 2012-03-06 ENCODE 1, 2 ENCFF245PJA, ENCFF508VRU, ENCFF574XYY, ENCFF968GEX 6798083 ENCODE Processing Pipeline 7e0ae144ef9fcd17e9e7f5ac2548024f https://www.encodeproject.org/files/ENCFF758VGA/@@download/ENCFF758VGA.bed.gz hg19 released control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length missing raw data in replicate insufficient replicate concordance ENCFF574CJH bigBed narrowPeak peaks ENCSR000AQA ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM5B-human ENCAB000AJZ, ENCAB487VWD DNA see document see document False 2012-03-06 ENCODE 1, 2 ENCFF296MZN 13023749 ENCODE Processing Pipeline 02827b91e8679f2995c8d921a174b270 https://www.encodeproject.org/files/ENCFF574CJH/@@download/ENCFF574CJH.bigBed GRCh38 released control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length missing raw data in replicate insufficient replicate concordance ENCFF668XLN bed narrowPeak optimal idr thresholded peaks ENCSR000AQA ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM5B-human ENCAB000AJZ, ENCAB487VWD DNA see document see document False 2012-03-06 ENCODE 1, 2 ENCFF296MZN, ENCFF334EYE, ENCFF419RSJ, ENCFF604PEX 399306 ENCODE Processing Pipeline ca7272ef7a4efd32be3d3dd96504e87c https://www.encodeproject.org/files/ENCFF668XLN/@@download/ENCFF668XLN.bed.gz GRCh38 released control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length missing raw data in replicate insufficient replicate concordance ENCFF826CYV bed narrowPeak conservative idr thresholded peaks ENCSR000AQA ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM5B-human ENCAB000AJZ, ENCAB487VWD DNA see document see document False 2012-03-06 ENCODE 1, 2 ENCFF001TDO, ENCFF106WXI, ENCFF629JIS, ENCFF758VGA 5590 ENCODE Processing Pipeline 2c9aa433dd5ca7fe69d8f7b71a3f29da https://www.encodeproject.org/files/ENCFF826CYV/@@download/ENCFF826CYV.bed.gz hg19 released control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length missing raw data in replicate insufficient replicate concordance ENCFF368TYM bed narrowPeak optimal idr thresholded peaks ENCSR000AQA ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM5B-human ENCAB000AJZ, ENCAB487VWD DNA see document see document False 2012-03-06 ENCODE 1, 2 ENCFF001TDO, ENCFF106WXI, ENCFF629JIS, ENCFF758VGA 411041 ENCODE Processing Pipeline 345d4603d143c43d2fd3a5937287c1f4 https://www.encodeproject.org/files/ENCFF368TYM/@@download/ENCFF368TYM.bed.gz hg19 released control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length missing raw data in replicate insufficient replicate concordance ENCFF618SCF bigBed narrowPeak conservative idr thresholded peaks ENCSR000AQA ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM5B-human ENCAB000AJZ, ENCAB487VWD DNA see document see document False 2012-03-06 ENCODE 1, 2 ENCFF826CYV 79701 ENCODE Processing Pipeline bff4188125842e04f13a1ed614370b7a https://www.encodeproject.org/files/ENCFF618SCF/@@download/ENCFF618SCF.bigBed hg19 released control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length missing raw data in replicate insufficient replicate concordance ENCFF466WSJ bigBed narrowPeak optimal idr thresholded peaks ENCSR000AQA ChIP-seq EFO:0002067 K562 cell line Homo sapiens KDM5B-human ENCAB000AJZ, ENCAB487VWD DNA see document see document False 2012-03-06 ENCODE 1, 2 ENCFF368TYM 1151068 ENCODE Processing Pipeline 8d9ce01d0c4949b4cc116113f7dbb3fd https://www.encodeproject.org/files/ENCFF466WSJ/@@download/ENCFF466WSJ.bigBed hg19 released control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length missing raw data in replicate insufficient replicate concordance ENCFF000BVG bigBed broadPeak peaks ENCSR000ATW ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX8-human ENCAB000AEX DNA see document see document False 2012-08-06 ENCODE ENCFF001SYX 858597 Bradley Bernstein, Broad e1606d1826a8bcf7d6c38d283e53d5f4 https://www.encodeproject.org/files/ENCFF000BVG/@@download/ENCFF000BVG.bigBed hg19 archived control low read depth, inconsistent platforms, mixed run types, low read depth, mixed read lengths, mild to moderate bottlenecking, moderate library complexity, low read length mismatched status insufficient replicate concordance, poor library complexity, severe bottlenecking extremely low read depth ENCFF000BVI bigWig signal ENCSR000ATW ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX8-human ENCAB000AEX DNA see document see document False 2012-08-06 ENCODE 129265434 Bradley Bernstein, Broad 4ecc96d73af7e95214d4f612f64bb109 https://www.encodeproject.org/files/ENCFF000BVI/@@download/ENCFF000BVI.bigWig hg19 archived control low read depth, inconsistent platforms, mixed run types, low read depth, mixed read lengths, mild to moderate bottlenecking, moderate library complexity, low read length mismatched status, missing derived_from insufficient replicate concordance, poor library complexity, severe bottlenecking extremely low read depth ENCFF000BVJ bam alignments ENCSR000ATW ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX8-human ENCAB000AEX DNA see document see document False 2012-08-06 ENCODE 3 1 971937031 Bradley Bernstein, Broad 424648d686aff363e79b958e2897a8db https://www.encodeproject.org/files/ENCFF000BVJ/@@download/ENCFF000BVJ.bam hg19 archived control low read depth, inconsistent platforms, mixed run types, low read depth, mixed read lengths, mild to moderate bottlenecking, moderate library complexity, low read length mismatched status, missing derived_from insufficient replicate concordance, poor library complexity, severe bottlenecking extremely low read depth ENCFF001SYX bed broadPeak peaks ENCSR000ATW ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX8-human ENCAB000AEX DNA see document see document False 2012-08-06 ENCODE 448409 Bradley Bernstein, Broad 92bc493f6b791547c1f4f5dd32e0df84 https://www.encodeproject.org/files/ENCFF001SYX/@@download/ENCFF001SYX.bed.gz hg19 archived control low read depth, inconsistent platforms, mixed run types, low read depth, mixed read lengths, mild to moderate bottlenecking, moderate library complexity, low read length mismatched status, missing derived_from insufficient replicate concordance, poor library complexity, severe bottlenecking extremely low read depth ENCFF388TMG fastq reads ENCSR000ATW ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX8-human ENCAB000AEX DNA see document see document False 2012-08-06 ENCODE 2 1 76 paired-ended 2 ENCFF942JXG 1760928770 Bradley Bernstein, Broad 30c8f58c54390e03f5f5168e05f1a1e0 https://www.encodeproject.org/files/ENCFF388TMG/@@download/ENCFF388TMG.fastq.gz Illumina HiSeq 2000 released control low read depth, inconsistent platforms, mixed run types, low read depth, mixed read lengths, mild to moderate bottlenecking, moderate library complexity, low read length mismatched status missing controlled_by, insufficient replicate concordance, poor library complexity, severe bottlenecking extremely low read depth ENCFF702MJJ fastq reads ENCSR000ATW ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX8-human ENCAB000AEX DNA see document see document False 2012-08-06 ENCODE 1 1 36 single-ended 1173062265 Bradley Bernstein, Broad 0655fdee97cb76833c89a4a22f8136ea https://www.encodeproject.org/files/ENCFF702MJJ/@@download/ENCFF702MJJ.fastq.gz Illumina HiSeq 2000 /files/ENCFF000BWK/ released control low read depth, inconsistent platforms, mixed run types, low read depth, mixed read lengths, mild to moderate bottlenecking, moderate library complexity, low read length mismatched status insufficient replicate concordance, poor library complexity, severe bottlenecking extremely low read depth ENCFF942JXG fastq reads ENCSR000ATW ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX8-human ENCAB000AEX DNA see document see document False 2012-08-06 ENCODE 2 1 76 paired-ended 1 ENCFF388TMG 1762729112 Bradley Bernstein, Broad d72f3a7a10cdcc56b1c4ffab2c104a74 https://www.encodeproject.org/files/ENCFF942JXG/@@download/ENCFF942JXG.fastq.gz Illumina HiSeq 2000 /files/ENCFF283HQV/, /files/ENCFF994FIB/ released control low read depth, inconsistent platforms, inconsistent control run_type, mixed run types, low read depth, mixed read lengths, mild to moderate bottlenecking, moderate library complexity, inconsistent control read length, low read length mismatched status insufficient replicate concordance, poor library complexity, severe bottlenecking extremely low read depth ENCFF750XGM bam unfiltered alignments ENCSR000ATW ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX8-human ENCAB000AEX DNA see document see document False 2012-08-06 ENCODE 1 36 ENCFF643CGH, ENCFF702MJJ 1383708461 ENCODE Processing Pipeline 148c4d7ed5b5076e03144fcf38d03257 https://www.encodeproject.org/files/ENCFF750XGM/@@download/ENCFF750XGM.bam GRCh38 released control low read depth, inconsistent platforms, mixed run types, low read depth, mixed read lengths, mild to moderate bottlenecking, moderate library complexity, low read length mismatched status insufficient replicate concordance, poor library complexity, severe bottlenecking extremely low read depth ENCFF781JEI bam alignments ENCSR000ATW ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX8-human ENCAB000AEX DNA see document see document False 2012-08-06 ENCODE 1 36 ENCFF643CGH, ENCFF702MJJ 190916888 ENCODE Processing Pipeline 1bac186a0ea890210e8b2c9ef79b8450 https://www.encodeproject.org/files/ENCFF781JEI/@@download/ENCFF781JEI.bam GRCh38 released control low read depth, inconsistent platforms, mixed run types, low read depth, mixed read lengths, mild to moderate bottlenecking, moderate library complexity, low read length mismatched status insufficient replicate concordance, poor library complexity, severe bottlenecking extremely low read depth ENCFF210NXE bam alignments ENCSR000ATW ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX8-human ENCAB000AEX DNA see document see document False 2012-08-06 ENCODE 1 36 ENCFF702MJJ, ENCFF807MUK 191122093 ENCODE Processing Pipeline 46a760492ff637337a0d0fcfe106baaf https://www.encodeproject.org/files/ENCFF210NXE/@@download/ENCFF210NXE.bam hg19 released control low read depth, inconsistent platforms, mixed run types, low read depth, mixed read lengths, mild to moderate bottlenecking, moderate library complexity, low read length mismatched status insufficient replicate concordance, poor library complexity, severe bottlenecking extremely low read depth ENCFF433RFL bam unfiltered alignments ENCSR000ATW ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX8-human ENCAB000AEX DNA see document see document False 2012-08-06 ENCODE 2 36 ENCFF807MUK, ENCFF942JXG 1275596028 ENCODE Processing Pipeline ee332a0afb4067e3eddef6e4c450fcd9 https://www.encodeproject.org/files/ENCFF433RFL/@@download/ENCFF433RFL.bam hg19 released control low read depth, inconsistent platforms, mixed run types, low read depth, mixed read lengths, mild to moderate bottlenecking, moderate library complexity, low read length mismatched status insufficient replicate concordance, poor library complexity, severe bottlenecking extremely low read depth ENCFF765LCE bam unfiltered alignments ENCSR000ATW ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX8-human ENCAB000AEX DNA see document see document False 2012-08-06 ENCODE 1 36 ENCFF702MJJ, ENCFF807MUK 1370838964 ENCODE Processing Pipeline 7051006d156447c3bf406d5d0aae52ec https://www.encodeproject.org/files/ENCFF765LCE/@@download/ENCFF765LCE.bam hg19 released control low read depth, inconsistent platforms, mixed run types, low read depth, mixed read lengths, mild to moderate bottlenecking, moderate library complexity, low read length mismatched status insufficient replicate concordance, poor library complexity, severe bottlenecking extremely low read depth ENCFF954PRL bam alignments ENCSR000ATW ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX8-human ENCAB000AEX DNA see document see document False 2012-08-06 ENCODE 2 36 ENCFF643CGH, ENCFF942JXG 703858140 ENCODE Processing Pipeline 95d84e928bb4a56e97df9c8842b928ba https://www.encodeproject.org/files/ENCFF954PRL/@@download/ENCFF954PRL.bam GRCh38 released control low read depth, inconsistent platforms, mixed run types, low read depth, mixed read lengths, mild to moderate bottlenecking, moderate library complexity, low read length mismatched status insufficient replicate concordance, poor library complexity, severe bottlenecking extremely low read depth ENCFF405REH bam unfiltered alignments ENCSR000ATW ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX8-human ENCAB000AEX DNA see document see document False 2012-08-06 ENCODE 2 36 ENCFF643CGH, ENCFF942JXG 1281943887 ENCODE Processing Pipeline f2096ee796fa5a89ea278d607be64df6 https://www.encodeproject.org/files/ENCFF405REH/@@download/ENCFF405REH.bam GRCh38 released control low read depth, inconsistent platforms, mixed run types, low read depth, mixed read lengths, mild to moderate bottlenecking, moderate library complexity, low read length mismatched status insufficient replicate concordance, poor library complexity, severe bottlenecking extremely low read depth ENCFF965GBZ bam alignments ENCSR000ATW ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX8-human ENCAB000AEX DNA see document see document False 2012-08-06 ENCODE 2 36 ENCFF807MUK, ENCFF942JXG 704396288 ENCODE Processing Pipeline 9554700a3210215fafd8162be54ba0de https://www.encodeproject.org/files/ENCFF965GBZ/@@download/ENCFF965GBZ.bam hg19 released control low read depth, inconsistent platforms, mixed run types, low read depth, mixed read lengths, mild to moderate bottlenecking, moderate library complexity, low read length mismatched status insufficient replicate concordance, poor library complexity, severe bottlenecking extremely low read depth ENCFF759VTK bigWig signal p-value ENCSR000ATW ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX8-human ENCAB000AEX DNA see document see document False 2012-08-06 ENCODE 1 ENCFF392XRJ, ENCFF781JEI 246387665 ENCODE Processing Pipeline 161c03a01238be8c4bc7c3a1f8ac136d https://www.encodeproject.org/files/ENCFF759VTK/@@download/ENCFF759VTK.bigWig GRCh38 released control low read depth, inconsistent platforms, mixed run types, low read depth, mixed read lengths, mild to moderate bottlenecking, moderate library complexity, low read length mismatched status insufficient replicate concordance, poor library complexity, severe bottlenecking extremely low read depth ENCFF292HPB bigWig fold change over control ENCSR000ATW ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX8-human ENCAB000AEX DNA see document see document False 2012-08-06 ENCODE 1 ENCFF392XRJ, ENCFF781JEI 97636384 ENCODE Processing Pipeline 5e9809b7c9d0f00812b7bb0842839483 https://www.encodeproject.org/files/ENCFF292HPB/@@download/ENCFF292HPB.bigWig GRCh38 released control low read depth, inconsistent platforms, mixed run types, low read depth, mixed read lengths, mild to moderate bottlenecking, moderate library complexity, low read length mismatched status insufficient replicate concordance, poor library complexity, severe bottlenecking extremely low read depth ENCFF436VLT bed narrowPeak conservative idr thresholded peaks ENCSR000ATW ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX8-human ENCAB000AEX DNA see document see document False 2012-08-06 ENCODE 1, 2 ENCFF001TDO, ENCFF259GGN, ENCFF878IXX, ENCFF899WHU 39259 ENCODE Processing Pipeline 4cac43825aa66c90ee229715ebdbb477 https://www.encodeproject.org/files/ENCFF436VLT/@@download/ENCFF436VLT.bed.gz hg19 released control low read depth, inconsistent platforms, mixed run types, low read depth, mixed read lengths, mild to moderate bottlenecking, moderate library complexity, low read length mismatched status insufficient replicate concordance, poor library complexity, severe bottlenecking extremely low read depth ENCFF878IXX bed narrowPeak peaks ENCSR000ATW ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX8-human ENCAB000AEX DNA see document see document False 2012-08-06 ENCODE 1, 2 ENCFF210NXE, ENCFF245PJA, ENCFF574XYY, ENCFF965GBZ 6756256 ENCODE Processing Pipeline 182bfa3c5923a78514852b50e1040aee https://www.encodeproject.org/files/ENCFF878IXX/@@download/ENCFF878IXX.bed.gz hg19 released control low read depth, inconsistent platforms, mixed run types, low read depth, mixed read lengths, mild to moderate bottlenecking, moderate library complexity, low read length mismatched status insufficient replicate concordance, poor library complexity, severe bottlenecking extremely low read depth ENCFF777DXI bigBed narrowPeak peaks ENCSR000ATW ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX8-human ENCAB000AEX DNA see document see document False 2012-08-06 ENCODE 1 ENCFF899WHU 8066714 ENCODE Processing Pipeline bba209250530cad225c05cfe33812c88 https://www.encodeproject.org/files/ENCFF777DXI/@@download/ENCFF777DXI.bigBed hg19 released control low read depth, inconsistent platforms, mixed run types, low read depth, mixed read lengths, mild to moderate bottlenecking, moderate library complexity, low read length mismatched status insufficient replicate concordance, poor library complexity, severe bottlenecking extremely low read depth ENCFF244SSS bed narrowPeak peaks ENCSR000ATW ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX8-human ENCAB000AEX DNA see document see document False 2012-08-06 ENCODE 1 ENCFF392XRJ, ENCFF781JEI 3137209 ENCODE Processing Pipeline ec1abde3487aeb144cb9f40e632ab538 https://www.encodeproject.org/files/ENCFF244SSS/@@download/ENCFF244SSS.bed.gz GRCh38 released control low read depth, inconsistent platforms, mixed run types, low read depth, mixed read lengths, mild to moderate bottlenecking, moderate library complexity, low read length mismatched status insufficient replicate concordance, poor library complexity, severe bottlenecking extremely low read depth ENCFF675VNE bigBed narrowPeak optimal idr thresholded peaks ENCSR000ATW ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX8-human ENCAB000AEX DNA see document see document False 2012-08-06 ENCODE 1, 2 ENCFF210GJE 265966 ENCODE Processing Pipeline 6fa07fff7c84981f1c630b0efd19e3ec https://www.encodeproject.org/files/ENCFF675VNE/@@download/ENCFF675VNE.bigBed GRCh38 released control low read depth, inconsistent platforms, mixed run types, low read depth, mixed read lengths, mild to moderate bottlenecking, moderate library complexity, low read length mismatched status insufficient replicate concordance, poor library complexity, severe bottlenecking extremely low read depth ENCFF873PUD bigWig signal p-value ENCSR000ATW ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX8-human ENCAB000AEX DNA see document see document False 2012-08-06 ENCODE 1 ENCFF210NXE, ENCFF574XYY 240972753 ENCODE Processing Pipeline 70cfa0667a6b0e8d46adc7f22d5c296b https://www.encodeproject.org/files/ENCFF873PUD/@@download/ENCFF873PUD.bigWig hg19 released control low read depth, inconsistent platforms, mixed run types, low read depth, mixed read lengths, mild to moderate bottlenecking, moderate library complexity, low read length mismatched status insufficient replicate concordance, poor library complexity, severe bottlenecking extremely low read depth ENCFF666QUX bigWig fold change over control ENCSR000ATW ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX8-human ENCAB000AEX DNA see document see document False 2012-08-06 ENCODE 1 ENCFF210NXE, ENCFF574XYY 98197119 ENCODE Processing Pipeline 102bd20b2c7e97c82274d51606fe2b9f https://www.encodeproject.org/files/ENCFF666QUX/@@download/ENCFF666QUX.bigWig hg19 released control low read depth, inconsistent platforms, mixed run types, low read depth, mixed read lengths, mild to moderate bottlenecking, moderate library complexity, low read length mismatched status insufficient replicate concordance, poor library complexity, severe bottlenecking extremely low read depth ENCFF099FAU bigWig fold change over control ENCSR000ATW ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX8-human ENCAB000AEX DNA see document see document False 2012-08-06 ENCODE 2 ENCFF245PJA, ENCFF574XYY, ENCFF965GBZ 414466620 ENCODE Processing Pipeline 752cf94966107ece4d58f718db3b0c31 https://www.encodeproject.org/files/ENCFF099FAU/@@download/ENCFF099FAU.bigWig hg19 released control low read depth, inconsistent platforms, mixed run types, low read depth, mixed read lengths, mild to moderate bottlenecking, moderate library complexity, low read length mismatched status insufficient replicate concordance, poor library complexity, severe bottlenecking extremely low read depth ENCFF206WVX bigWig fold change over control ENCSR000ATW ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX8-human ENCAB000AEX DNA see document see document False 2012-08-06 ENCODE 1, 2 ENCFF210NXE, ENCFF245PJA, ENCFF574XYY, ENCFF965GBZ 486407725 ENCODE Processing Pipeline 47e1700994357c1ef3edc4428105a393 https://www.encodeproject.org/files/ENCFF206WVX/@@download/ENCFF206WVX.bigWig hg19 released control low read depth, inconsistent platforms, mixed run types, low read depth, mixed read lengths, mild to moderate bottlenecking, moderate library complexity, low read length mismatched status insufficient replicate concordance, poor library complexity, severe bottlenecking extremely low read depth ENCFF636NOK bigWig fold change over control ENCSR000ATW ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX8-human ENCAB000AEX DNA see document see document False 2012-08-06 ENCODE 2 ENCFF392XRJ, ENCFF829HZY, ENCFF954PRL 413146001 ENCODE Processing Pipeline 59bf55776c77b58aa8a62826b5cf4a81 https://www.encodeproject.org/files/ENCFF636NOK/@@download/ENCFF636NOK.bigWig GRCh38 released control low read depth, inconsistent platforms, mixed run types, low read depth, mixed read lengths, mild to moderate bottlenecking, moderate library complexity, low read length mismatched status insufficient replicate concordance, poor library complexity, severe bottlenecking extremely low read depth ENCFF110FTQ bigBed narrowPeak peaks ENCSR000ATW ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX8-human ENCAB000AEX DNA see document see document False 2012-08-06 ENCODE 1 ENCFF244SSS 8033010 ENCODE Processing Pipeline 2bd5213edc179da1a93b14e270b5da05 https://www.encodeproject.org/files/ENCFF110FTQ/@@download/ENCFF110FTQ.bigBed GRCh38 released control low read depth, inconsistent platforms, mixed run types, low read depth, mixed read lengths, mild to moderate bottlenecking, moderate library complexity, low read length mismatched status insufficient replicate concordance, poor library complexity, severe bottlenecking extremely low read depth ENCFF938QZS bigBed narrowPeak conservative idr thresholded peaks ENCSR000ATW ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX8-human ENCAB000AEX DNA see document see document False 2012-08-06 ENCODE 1, 2 ENCFF346SWX 171101 ENCODE Processing Pipeline e5dee66d0b5bc36aee958f02a5164569 https://www.encodeproject.org/files/ENCFF938QZS/@@download/ENCFF938QZS.bigBed GRCh38 released control low read depth, inconsistent platforms, mixed run types, low read depth, mixed read lengths, mild to moderate bottlenecking, moderate library complexity, low read length mismatched status insufficient replicate concordance, poor library complexity, severe bottlenecking extremely low read depth ENCFF210GJE bed narrowPeak optimal idr thresholded peaks ENCSR000ATW ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX8-human ENCAB000AEX DNA see document see document False 2012-08-06 ENCODE 1, 2 ENCFF064CHN, ENCFF244SSS, ENCFF391THL, ENCFF419RSJ 84014 ENCODE Processing Pipeline deffa54571fba63b8dcf1a3a04b6298a https://www.encodeproject.org/files/ENCFF210GJE/@@download/ENCFF210GJE.bed.gz GRCh38 released control low read depth, inconsistent platforms, mixed run types, low read depth, mixed read lengths, mild to moderate bottlenecking, moderate library complexity, low read length mismatched status insufficient replicate concordance, poor library complexity, severe bottlenecking extremely low read depth ENCFF787JMC bigWig signal p-value ENCSR000ATW ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX8-human ENCAB000AEX DNA see document see document False 2012-08-06 ENCODE 2 ENCFF245PJA, ENCFF574XYY, ENCFF965GBZ 426661197 ENCODE Processing Pipeline ccf3459aac085a9f6cd1a19ad5384d1f https://www.encodeproject.org/files/ENCFF787JMC/@@download/ENCFF787JMC.bigWig hg19 released control low read depth, inconsistent platforms, mixed run types, low read depth, mixed read lengths, mild to moderate bottlenecking, moderate library complexity, low read length mismatched status insufficient replicate concordance, poor library complexity, severe bottlenecking extremely low read depth ENCFF767YSR bigWig signal p-value ENCSR000ATW ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX8-human ENCAB000AEX DNA see document see document False 2012-08-06 ENCODE 1, 2 ENCFF392XRJ, ENCFF781JEI, ENCFF829HZY, ENCFF954PRL 510916346 ENCODE Processing Pipeline 97af4c9fe26826a00ebe4b29cbdb5294 https://www.encodeproject.org/files/ENCFF767YSR/@@download/ENCFF767YSR.bigWig GRCh38 released control low read depth, inconsistent platforms, mixed run types, low read depth, mixed read lengths, mild to moderate bottlenecking, moderate library complexity, low read length mismatched status insufficient replicate concordance, poor library complexity, severe bottlenecking extremely low read depth ENCFF899WHU bed narrowPeak peaks ENCSR000ATW ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX8-human ENCAB000AEX DNA see document see document False 2012-08-06 ENCODE 1 ENCFF210NXE, ENCFF574XYY 3175361 ENCODE Processing Pipeline de97e63da95381464b0585cfcc301a51 https://www.encodeproject.org/files/ENCFF899WHU/@@download/ENCFF899WHU.bed.gz hg19 released control low read depth, inconsistent platforms, mixed run types, low read depth, mixed read lengths, mild to moderate bottlenecking, moderate library complexity, low read length mismatched status insufficient replicate concordance, poor library complexity, severe bottlenecking extremely low read depth ENCFF780LQI bigWig signal p-value ENCSR000ATW ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX8-human ENCAB000AEX DNA see document see document False 2012-08-06 ENCODE 1, 2 ENCFF210NXE, ENCFF245PJA, ENCFF574XYY, ENCFF965GBZ 563847431 ENCODE Processing Pipeline 639359a88e6dca853bf00b1f0c62e9f1 https://www.encodeproject.org/files/ENCFF780LQI/@@download/ENCFF780LQI.bigWig hg19 released control low read depth, inconsistent platforms, mixed run types, low read depth, mixed read lengths, mild to moderate bottlenecking, moderate library complexity, low read length mismatched status insufficient replicate concordance, poor library complexity, severe bottlenecking extremely low read depth ENCFF259GGN bed narrowPeak peaks ENCSR000ATW ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX8-human ENCAB000AEX DNA see document see document False 2012-08-06 ENCODE 2 ENCFF245PJA, ENCFF574XYY, ENCFF965GBZ 5985541 ENCODE Processing Pipeline 7c06ada8c4afcca9a87c7d40ad8e052e https://www.encodeproject.org/files/ENCFF259GGN/@@download/ENCFF259GGN.bed.gz hg19 released control low read depth, inconsistent platforms, mixed run types, low read depth, mixed read lengths, mild to moderate bottlenecking, moderate library complexity, low read length mismatched status insufficient replicate concordance, poor library complexity, severe bottlenecking extremely low read depth ENCFF133HYP bigBed narrowPeak peaks ENCSR000ATW ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX8-human ENCAB000AEX DNA see document see document False 2012-08-06 ENCODE 2 ENCFF259GGN 12899645 ENCODE Processing Pipeline 45f3321da967d548836c26815985d802 https://www.encodeproject.org/files/ENCFF133HYP/@@download/ENCFF133HYP.bigBed hg19 released control low read depth, inconsistent platforms, mixed run types, low read depth, mixed read lengths, mild to moderate bottlenecking, moderate library complexity, low read length mismatched status insufficient replicate concordance, poor library complexity, severe bottlenecking extremely low read depth ENCFF069LKS bigBed narrowPeak peaks ENCSR000ATW ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX8-human ENCAB000AEX DNA see document see document False 2012-08-06 ENCODE 1, 2 ENCFF878IXX 12477332 ENCODE Processing Pipeline c5205e9bb6b8a8f78cb4f9dfce147403 https://www.encodeproject.org/files/ENCFF069LKS/@@download/ENCFF069LKS.bigBed hg19 released control low read depth, inconsistent platforms, mixed run types, low read depth, mixed read lengths, mild to moderate bottlenecking, moderate library complexity, low read length mismatched status insufficient replicate concordance, poor library complexity, severe bottlenecking extremely low read depth ENCFF064CHN bed narrowPeak peaks ENCSR000ATW ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX8-human ENCAB000AEX DNA see document see document False 2012-08-06 ENCODE 2 ENCFF392XRJ, ENCFF829HZY, ENCFF954PRL 5969961 ENCODE Processing Pipeline 213c1e8d6651e22f120d6ed955c885ef https://www.encodeproject.org/files/ENCFF064CHN/@@download/ENCFF064CHN.bed.gz GRCh38 released control low read depth, inconsistent platforms, mixed run types, low read depth, mixed read lengths, mild to moderate bottlenecking, moderate library complexity, low read length mismatched status insufficient replicate concordance, poor library complexity, severe bottlenecking extremely low read depth ENCFF391THL bed narrowPeak peaks ENCSR000ATW ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX8-human ENCAB000AEX DNA see document see document False 2012-08-06 ENCODE 1, 2 ENCFF392XRJ, ENCFF781JEI, ENCFF829HZY, ENCFF954PRL 6746202 ENCODE Processing Pipeline bd8f3b183fae9c685e64bb4e29dffda8 https://www.encodeproject.org/files/ENCFF391THL/@@download/ENCFF391THL.bed.gz GRCh38 released control low read depth, inconsistent platforms, mixed run types, low read depth, mixed read lengths, mild to moderate bottlenecking, moderate library complexity, low read length mismatched status insufficient replicate concordance, poor library complexity, severe bottlenecking extremely low read depth ENCFF346SWX bed narrowPeak conservative idr thresholded peaks ENCSR000ATW ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX8-human ENCAB000AEX DNA see document see document False 2012-08-06 ENCODE 1, 2 ENCFF064CHN, ENCFF244SSS, ENCFF391THL, ENCFF419RSJ 39126 ENCODE Processing Pipeline a6e815cdcf02c454ed4263080cde6af6 https://www.encodeproject.org/files/ENCFF346SWX/@@download/ENCFF346SWX.bed.gz GRCh38 released control low read depth, inconsistent platforms, mixed run types, low read depth, mixed read lengths, mild to moderate bottlenecking, moderate library complexity, low read length mismatched status insufficient replicate concordance, poor library complexity, severe bottlenecking extremely low read depth ENCFF974FOR bigWig signal p-value ENCSR000ATW ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX8-human ENCAB000AEX DNA see document see document False 2012-08-06 ENCODE 2 ENCFF392XRJ, ENCFF829HZY, ENCFF954PRL 547078021 ENCODE Processing Pipeline 6e19b928072899f7a24bcac91f98be38 https://www.encodeproject.org/files/ENCFF974FOR/@@download/ENCFF974FOR.bigWig GRCh38 released control low read depth, inconsistent platforms, mixed run types, low read depth, mixed read lengths, mild to moderate bottlenecking, moderate library complexity, low read length mismatched status insufficient replicate concordance, poor library complexity, severe bottlenecking extremely low read depth ENCFF687ZGN bigWig fold change over control ENCSR000ATW ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX8-human ENCAB000AEX DNA see document see document False 2012-08-06 ENCODE 1, 2 ENCFF392XRJ, ENCFF781JEI, ENCFF829HZY, ENCFF954PRL 487179199 ENCODE Processing Pipeline a503e6edb8298b0fc07b3296355dc42d https://www.encodeproject.org/files/ENCFF687ZGN/@@download/ENCFF687ZGN.bigWig GRCh38 released control low read depth, inconsistent platforms, mixed run types, low read depth, mixed read lengths, mild to moderate bottlenecking, moderate library complexity, low read length mismatched status insufficient replicate concordance, poor library complexity, severe bottlenecking extremely low read depth ENCFF945YDN bigBed narrowPeak optimal idr thresholded peaks ENCSR000ATW ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX8-human ENCAB000AEX DNA see document see document False 2012-08-06 ENCODE 1, 2 ENCFF456PQY 265156 ENCODE Processing Pipeline 60dd524c95937a3bf1c19c336e8a2e11 https://www.encodeproject.org/files/ENCFF945YDN/@@download/ENCFF945YDN.bigBed hg19 released control low read depth, inconsistent platforms, mixed run types, low read depth, mixed read lengths, mild to moderate bottlenecking, moderate library complexity, low read length mismatched status insufficient replicate concordance, poor library complexity, severe bottlenecking extremely low read depth ENCFF342VRO bigBed narrowPeak peaks ENCSR000ATW ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX8-human ENCAB000AEX DNA see document see document False 2012-08-06 ENCODE 1, 2 ENCFF391THL 12487322 ENCODE Processing Pipeline e7e5e6145903994ed1c2736c2f683a47 https://www.encodeproject.org/files/ENCFF342VRO/@@download/ENCFF342VRO.bigBed GRCh38 released control low read depth, inconsistent platforms, mixed run types, low read depth, mixed read lengths, mild to moderate bottlenecking, moderate library complexity, low read length mismatched status insufficient replicate concordance, poor library complexity, severe bottlenecking extremely low read depth ENCFF712QIM bigBed narrowPeak conservative idr thresholded peaks ENCSR000ATW ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX8-human ENCAB000AEX DNA see document see document False 2012-08-06 ENCODE 1, 2 ENCFF436VLT 170474 ENCODE Processing Pipeline 3e598446d19e7deeeb798f09eaf4728a https://www.encodeproject.org/files/ENCFF712QIM/@@download/ENCFF712QIM.bigBed hg19 released control low read depth, inconsistent platforms, mixed run types, low read depth, mixed read lengths, mild to moderate bottlenecking, moderate library complexity, low read length mismatched status insufficient replicate concordance, poor library complexity, severe bottlenecking extremely low read depth ENCFF456PQY bed narrowPeak optimal idr thresholded peaks ENCSR000ATW ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX8-human ENCAB000AEX DNA see document see document False 2012-08-06 ENCODE 1, 2 ENCFF001TDO, ENCFF259GGN, ENCFF878IXX, ENCFF899WHU 84138 ENCODE Processing Pipeline fd9253bc90bc6d93040317f11af2b98a https://www.encodeproject.org/files/ENCFF456PQY/@@download/ENCFF456PQY.bed.gz hg19 released control low read depth, inconsistent platforms, mixed run types, low read depth, mixed read lengths, mild to moderate bottlenecking, moderate library complexity, low read length mismatched status insufficient replicate concordance, poor library complexity, severe bottlenecking extremely low read depth ENCFF878EAM bigBed narrowPeak peaks ENCSR000ATW ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX8-human ENCAB000AEX DNA see document see document False 2012-08-06 ENCODE 2 ENCFF064CHN 12888479 ENCODE Processing Pipeline 37c96bfc2a4c151c28cd13c36dc9ee3c https://www.encodeproject.org/files/ENCFF878EAM/@@download/ENCFF878EAM.bigBed GRCh38 released control low read depth, inconsistent platforms, mixed run types, low read depth, mixed read lengths, mild to moderate bottlenecking, moderate library complexity, low read length mismatched status insufficient replicate concordance, poor library complexity, severe bottlenecking extremely low read depth ENCFF000CBG bam alignments ENCSR000AQI ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBBP5-human ENCAB000AKH DNA see document see document False 2012-03-06 ENCODE 1 1 1449071701 Bradley Bernstein, Broad ca2a2a9d0455346d5d1e1b32be3c8dd8 https://www.encodeproject.org/files/ENCFF000CBG/@@download/ENCFF000CBG.bam hg19 archived borderline replicate concordance, inconsistent platforms, control low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample, missing derived_from, missing raw data in replicate poor library complexity, insufficient read depth, severe bottlenecking ENCFF000CBI bigBed broadPeak peaks ENCSR000AQI ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBBP5-human ENCAB000AKH DNA see document see document False 2012-03-06 ENCODE ENCFF001TAB 3645977 Bradley Bernstein, Broad 036229b245e944463bf4edafa74cef2f https://www.encodeproject.org/files/ENCFF000CBI/@@download/ENCFF000CBI.bigBed hg19 archived borderline replicate concordance, inconsistent platforms, control low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample, missing raw data in replicate poor library complexity, insufficient read depth, severe bottlenecking ENCFF000CBJ bam alignments ENCSR000AQI ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBBP5-human ENCAB000AKH DNA see document see document False 2012-03-06 ENCODE 2 1 628375040 Bradley Bernstein, Broad c731a6e50ebd5402ef72323308f974bc https://www.encodeproject.org/files/ENCFF000CBJ/@@download/ENCFF000CBJ.bam hg19 archived borderline replicate concordance, inconsistent platforms, control low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample, missing raw data in replicate, missing derived_from poor library complexity, insufficient read depth, severe bottlenecking ENCFF000CBL bigWig signal ENCSR000AQI ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBBP5-human ENCAB000AKH DNA see document see document False 2012-03-06 ENCODE 444965512 Bradley Bernstein, Broad 7a1619623207a408655a3af4c91cb275 https://www.encodeproject.org/files/ENCFF000CBL/@@download/ENCFF000CBL.bigWig hg19 archived borderline replicate concordance, inconsistent platforms, control low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample, missing derived_from, missing raw data in replicate poor library complexity, insufficient read depth, severe bottlenecking ENCFF001TAB bed broadPeak peaks ENCSR000AQI ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBBP5-human ENCAB000AKH DNA see document see document False 2012-03-06 ENCODE 2319055 Bradley Bernstein, Broad 1e3db8d5a535a0debce601f47bc0b070 https://www.encodeproject.org/files/ENCFF001TAB/@@download/ENCFF001TAB.bed.gz hg19 archived borderline replicate concordance, inconsistent platforms, control low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample, missing raw data in replicate, missing derived_from poor library complexity, insufficient read depth, severe bottlenecking ENCFF002CEU bed narrowPeak optimal idr thresholded peaks ENCSR000AQI ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBBP5-human ENCAB000AKH DNA see document see document False 2012-03-06 ENCODE 316070 ENCODE Consortium Analysis Working Group 281c4ee8e2b9fc087b8c64b15fb8dcd9 https://www.encodeproject.org/files/ENCFF002CEU/@@download/ENCFF002CEU.bed.gz hg19 archived borderline replicate concordance, inconsistent platforms, control low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample, missing raw data in replicate, missing derived_from poor library complexity, insufficient read depth, severe bottlenecking ENCFF891FTF bigBed narrowPeak optimal idr thresholded peaks ENCSR000AQI ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBBP5-human ENCAB000AKH DNA see document see document False 2012-03-06 ENCODE ENCFF002CEU 909473 ENCODE Consortium 1e664867a5b7475a2dff446a69b3dfcd https://www.encodeproject.org/files/ENCFF891FTF/@@download/ENCFF891FTF.bigBed hg19 archived borderline replicate concordance, inconsistent platforms, control low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample, missing raw data in replicate poor library complexity, insufficient read depth, severe bottlenecking ENCFF343WXI fastq reads ENCSR000AQI ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBBP5-human ENCAB000AKH DNA see document see document False 2012-03-06 ENCODE 2 1 36 single-ended 1286619698 Bradley Bernstein, Broad f3aa3602c909bf1b5413b4d195493ea5 https://www.encodeproject.org/files/ENCFF343WXI/@@download/ENCFF343WXI.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF283HQV/, /files/ENCFF994FIB/ released borderline replicate concordance, inconsistent platforms, control low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample, missing raw data in replicate poor library complexity, insufficient read depth, severe bottlenecking ENCFF148AGP fastq reads ENCSR000AQI ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBBP5-human ENCAB000AKH DNA see document see document False 2012-03-06 ENCODE 1 1 36 single-ended 2110065269 Bradley Bernstein, Broad a1043d31c8354c385c3208ff4864eb76 https://www.encodeproject.org/files/ENCFF148AGP/@@download/ENCFF148AGP.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000BWK/ released borderline replicate concordance, inconsistent platforms, control low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample, missing raw data in replicate poor library complexity, insufficient read depth, severe bottlenecking ENCFF989QHY fastq reads ENCSR000AQI ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBBP5-human ENCAB000AKH DNA see document see document False 2012-03-06 ENCODE 3 1 25 paired-ended 1 ENCFF805ZZM 1219281269 Bradley Bernstein, Broad 47e14eede00481611cb293a7de0f264f https://www.encodeproject.org/files/ENCFF989QHY/@@download/ENCFF989QHY.fastq.gz Illumina HiSeq 2000 archived borderline replicate concordance, inconsistent platforms, control low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample, missing raw data in replicate severe bottlenecking, poor library complexity, insufficient read depth, missing controlled_by ENCFF805ZZM fastq reads ENCSR000AQI ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBBP5-human ENCAB000AKH DNA see document see document False 2012-03-06 ENCODE 3 1 25 paired-ended 2 ENCFF989QHY 1228359223 Bradley Bernstein, Broad ca1da8518f1b88aa23e79fbf9c3a8b0c https://www.encodeproject.org/files/ENCFF805ZZM/@@download/ENCFF805ZZM.fastq.gz Illumina HiSeq 2000 archived borderline replicate concordance, inconsistent platforms, control low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample, missing raw data in replicate severe bottlenecking, poor library complexity, insufficient read depth, missing controlled_by ENCFF443WKS bam unfiltered alignments ENCSR000AQI ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBBP5-human ENCAB000AKH DNA see document see document False 2012-03-06 ENCODE 2 36 ENCFF343WXI, ENCFF807MUK 1696183403 ENCODE Processing Pipeline 574585507968864077839c57af76d6a4 https://www.encodeproject.org/files/ENCFF443WKS/@@download/ENCFF443WKS.bam hg19 released borderline replicate concordance, inconsistent platforms, control low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample, missing raw data in replicate poor library complexity, insufficient read depth, severe bottlenecking ENCFF624XFS bam unfiltered alignments ENCSR000AQI ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBBP5-human ENCAB000AKH DNA see document see document False 2012-03-06 ENCODE 1 36 ENCFF148AGP, ENCFF643CGH 2432427896 ENCODE Processing Pipeline 2d8e54d01dee24c57952a403ebec039d https://www.encodeproject.org/files/ENCFF624XFS/@@download/ENCFF624XFS.bam GRCh38 released borderline replicate concordance, inconsistent platforms, control low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample, missing raw data in replicate poor library complexity, insufficient read depth, severe bottlenecking ENCFF713RXC bam alignments ENCSR000AQI ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBBP5-human ENCAB000AKH DNA see document see document False 2012-03-06 ENCODE 1 36 ENCFF148AGP, ENCFF643CGH 283908308 ENCODE Processing Pipeline 8fd337f7d85d4c84f80b451f7b1d85c0 https://www.encodeproject.org/files/ENCFF713RXC/@@download/ENCFF713RXC.bam GRCh38 released borderline replicate concordance, inconsistent platforms, control low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample, missing raw data in replicate poor library complexity, insufficient read depth, severe bottlenecking ENCFF849RLM bam unfiltered alignments ENCSR000AQI ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBBP5-human ENCAB000AKH DNA see document see document False 2012-03-06 ENCODE 2 36 ENCFF343WXI, ENCFF643CGH 1702463674 ENCODE Processing Pipeline bc4246b456334d7c960e40e10a15999a https://www.encodeproject.org/files/ENCFF849RLM/@@download/ENCFF849RLM.bam GRCh38 released borderline replicate concordance, inconsistent platforms, control low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample, missing raw data in replicate poor library complexity, insufficient read depth, severe bottlenecking ENCFF251KZR bam unfiltered alignments ENCSR000AQI ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBBP5-human ENCAB000AKH DNA see document see document False 2012-03-06 ENCODE 1 36 ENCFF148AGP, ENCFF807MUK 2424070986 ENCODE Processing Pipeline 3a9a1c23f7d5f858b503f9a8fd82fb2b https://www.encodeproject.org/files/ENCFF251KZR/@@download/ENCFF251KZR.bam hg19 released borderline replicate concordance, inconsistent platforms, control low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample, missing raw data in replicate poor library complexity, insufficient read depth, severe bottlenecking ENCFF550DDF bam alignments ENCSR000AQI ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBBP5-human ENCAB000AKH DNA see document see document False 2012-03-06 ENCODE 2 36 ENCFF343WXI, ENCFF643CGH 993132337 ENCODE Processing Pipeline 3034a38142f4f1c4420e7955b81ff66c https://www.encodeproject.org/files/ENCFF550DDF/@@download/ENCFF550DDF.bam GRCh38 released borderline replicate concordance, inconsistent platforms, control low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample, missing raw data in replicate poor library complexity, insufficient read depth, severe bottlenecking ENCFF178KOP bam alignments ENCSR000AQI ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBBP5-human ENCAB000AKH DNA see document see document False 2012-03-06 ENCODE 1 36 ENCFF148AGP, ENCFF807MUK 284217596 ENCODE Processing Pipeline e3a1db0183e4e7b8fab4f57dda7b1217 https://www.encodeproject.org/files/ENCFF178KOP/@@download/ENCFF178KOP.bam hg19 released borderline replicate concordance, inconsistent platforms, control low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample, missing raw data in replicate poor library complexity, insufficient read depth, severe bottlenecking ENCFF707DNG bam alignments ENCSR000AQI ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBBP5-human ENCAB000AKH DNA see document see document False 2012-03-06 ENCODE 2 36 ENCFF343WXI, ENCFF807MUK 993905329 ENCODE Processing Pipeline 468f6bd38d268bbbf48ac3ccdf110424 https://www.encodeproject.org/files/ENCFF707DNG/@@download/ENCFF707DNG.bam hg19 released borderline replicate concordance, inconsistent platforms, control low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample, missing raw data in replicate poor library complexity, insufficient read depth, severe bottlenecking ENCFF462RXG bigWig signal p-value ENCSR000AQI ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBBP5-human ENCAB000AKH DNA see document see document False 2012-03-06 ENCODE 1 ENCFF178KOP, ENCFF574XYY 314345950 ENCODE Processing Pipeline a9ad342ccafbb6b4396de1be62999f86 https://www.encodeproject.org/files/ENCFF462RXG/@@download/ENCFF462RXG.bigWig hg19 released borderline replicate concordance, inconsistent platforms, control low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample, missing raw data in replicate poor library complexity, insufficient read depth, severe bottlenecking ENCFF761RMW bigWig fold change over control ENCSR000AQI ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBBP5-human ENCAB000AKH DNA see document see document False 2012-03-06 ENCODE 1 ENCFF178KOP, ENCFF574XYY 154095153 ENCODE Processing Pipeline 16bc4d86965ea7cb01b537eb72b8e1ba https://www.encodeproject.org/files/ENCFF761RMW/@@download/ENCFF761RMW.bigWig hg19 released borderline replicate concordance, inconsistent platforms, control low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample, missing raw data in replicate poor library complexity, insufficient read depth, severe bottlenecking ENCFF869RAW bigWig signal p-value ENCSR000AQI ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBBP5-human ENCAB000AKH DNA see document see document False 2012-03-06 ENCODE 2 ENCFF245PJA, ENCFF574XYY, ENCFF707DNG 623612583 ENCODE Processing Pipeline 5fb21b2a37d210466d22c40839704cd2 https://www.encodeproject.org/files/ENCFF869RAW/@@download/ENCFF869RAW.bigWig hg19 released borderline replicate concordance, inconsistent platforms, control low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample, missing raw data in replicate poor library complexity, insufficient read depth, severe bottlenecking ENCFF200SIL bigWig fold change over control ENCSR000AQI ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBBP5-human ENCAB000AKH DNA see document see document False 2012-03-06 ENCODE 2 ENCFF245PJA, ENCFF574XYY, ENCFF707DNG 461103895 ENCODE Processing Pipeline e5b43bf193bdb91eb0ee3813f6605162 https://www.encodeproject.org/files/ENCFF200SIL/@@download/ENCFF200SIL.bigWig hg19 released borderline replicate concordance, inconsistent platforms, control low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample, missing raw data in replicate poor library complexity, insufficient read depth, severe bottlenecking ENCFF058KTS bigWig fold change over control ENCSR000AQI ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBBP5-human ENCAB000AKH DNA see document see document False 2012-03-06 ENCODE 1, 2 ENCFF178KOP, ENCFF245PJA, ENCFF574XYY, ENCFF707DNG 585447761 ENCODE Processing Pipeline 3492a9bf686886bc9409d7854831c713 https://www.encodeproject.org/files/ENCFF058KTS/@@download/ENCFF058KTS.bigWig hg19 released borderline replicate concordance, inconsistent platforms, control low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample, missing raw data in replicate poor library complexity, insufficient read depth, severe bottlenecking ENCFF528ISK bed narrowPeak peaks ENCSR000AQI ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBBP5-human ENCAB000AKH DNA see document see document False 2012-03-06 ENCODE 1 ENCFF178KOP, ENCFF574XYY 4417958 ENCODE Processing Pipeline d3f7cca88a9ed3ff600d59ee4106d0fb https://www.encodeproject.org/files/ENCFF528ISK/@@download/ENCFF528ISK.bed.gz hg19 released borderline replicate concordance, inconsistent platforms, control low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample, missing raw data in replicate poor library complexity, insufficient read depth, severe bottlenecking ENCFF564JQT bigBed narrowPeak peaks ENCSR000AQI ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBBP5-human ENCAB000AKH DNA see document see document False 2012-03-06 ENCODE 1 ENCFF528ISK 10176919 ENCODE Processing Pipeline f60979a69ef5c06175839603e146ce1a https://www.encodeproject.org/files/ENCFF564JQT/@@download/ENCFF564JQT.bigBed hg19 released borderline replicate concordance, inconsistent platforms, control low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample, missing raw data in replicate poor library complexity, insufficient read depth, severe bottlenecking ENCFF058DJL bed narrowPeak peaks ENCSR000AQI ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBBP5-human ENCAB000AKH DNA see document see document False 2012-03-06 ENCODE 2 ENCFF245PJA, ENCFF574XYY, ENCFF707DNG 6863158 ENCODE Processing Pipeline ee81955a8585a9d1a942965e8afb2823 https://www.encodeproject.org/files/ENCFF058DJL/@@download/ENCFF058DJL.bed.gz hg19 released borderline replicate concordance, inconsistent platforms, control low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample, missing raw data in replicate poor library complexity, insufficient read depth, severe bottlenecking ENCFF384KND bigWig signal p-value ENCSR000AQI ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBBP5-human ENCAB000AKH DNA see document see document False 2012-03-06 ENCODE 1, 2 ENCFF178KOP, ENCFF245PJA, ENCFF574XYY, ENCFF707DNG 646366964 ENCODE Processing Pipeline c31df5d0ecf27b1f75e732db4eade9d7 https://www.encodeproject.org/files/ENCFF384KND/@@download/ENCFF384KND.bigWig hg19 released borderline replicate concordance, inconsistent platforms, control low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample, missing raw data in replicate poor library complexity, insufficient read depth, severe bottlenecking ENCFF617FLM bed narrowPeak peaks ENCSR000AQI ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBBP5-human ENCAB000AKH DNA see document see document False 2012-03-06 ENCODE 1, 2 ENCFF178KOP, ENCFF245PJA, ENCFF574XYY, ENCFF707DNG 6978811 ENCODE Processing Pipeline 0d12bdaa6e35e22c278b4ced9e8d450c https://www.encodeproject.org/files/ENCFF617FLM/@@download/ENCFF617FLM.bed.gz hg19 released borderline replicate concordance, inconsistent platforms, control low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample, missing raw data in replicate poor library complexity, insufficient read depth, severe bottlenecking ENCFF579WGO bigBed narrowPeak peaks ENCSR000AQI ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBBP5-human ENCAB000AKH DNA see document see document False 2012-03-06 ENCODE 1, 2 ENCFF617FLM 12652911 ENCODE Processing Pipeline bc84f65f5d7558664d2b9a353eca3043 https://www.encodeproject.org/files/ENCFF579WGO/@@download/ENCFF579WGO.bigBed hg19 released borderline replicate concordance, inconsistent platforms, control low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample, missing raw data in replicate poor library complexity, insufficient read depth, severe bottlenecking ENCFF483WSN bed narrowPeak conservative idr thresholded peaks ENCSR000AQI ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBBP5-human ENCAB000AKH DNA see document see document False 2012-03-06 ENCODE 1, 2 ENCFF001TDO, ENCFF058DJL, ENCFF528ISK, ENCFF617FLM 309086 ENCODE Processing Pipeline 531d2d33a60a8d8192e30780325724f1 https://www.encodeproject.org/files/ENCFF483WSN/@@download/ENCFF483WSN.bed.gz hg19 released borderline replicate concordance, inconsistent platforms, control low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample, missing raw data in replicate poor library complexity, insufficient read depth, severe bottlenecking ENCFF493SST bigBed narrowPeak conservative idr thresholded peaks ENCSR000AQI ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBBP5-human ENCAB000AKH DNA see document see document False 2012-03-06 ENCODE 1, 2 ENCFF483WSN 765510 ENCODE Processing Pipeline 0647a045b6ef1c55589c3c14e3c216d7 https://www.encodeproject.org/files/ENCFF493SST/@@download/ENCFF493SST.bigBed hg19 released borderline replicate concordance, inconsistent platforms, control low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample, missing raw data in replicate poor library complexity, insufficient read depth, severe bottlenecking ENCFF484ZIS bigBed narrowPeak peaks ENCSR000AQI ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBBP5-human ENCAB000AKH DNA see document see document False 2012-03-06 ENCODE 2 ENCFF058DJL 12629056 ENCODE Processing Pipeline a3a4eba8aba91b3c37388a0b85a7db40 https://www.encodeproject.org/files/ENCFF484ZIS/@@download/ENCFF484ZIS.bigBed hg19 released borderline replicate concordance, inconsistent platforms, control low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample, missing raw data in replicate poor library complexity, insufficient read depth, severe bottlenecking ENCFF379MPS bed narrowPeak optimal idr thresholded peaks ENCSR000AQI ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBBP5-human ENCAB000AKH DNA see document see document False 2012-03-06 ENCODE 1, 2 ENCFF001TDO, ENCFF058DJL, ENCFF528ISK, ENCFF617FLM 443533 ENCODE Processing Pipeline afdb5fc3b65ee21fff5b7c97fe28142f https://www.encodeproject.org/files/ENCFF379MPS/@@download/ENCFF379MPS.bed.gz hg19 released borderline replicate concordance, inconsistent platforms, control low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample, missing raw data in replicate poor library complexity, insufficient read depth, severe bottlenecking ENCFF735UGM bigBed narrowPeak optimal idr thresholded peaks ENCSR000AQI ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBBP5-human ENCAB000AKH DNA see document see document False 2012-03-06 ENCODE 1, 2 ENCFF379MPS 1195779 ENCODE Processing Pipeline 429419142d3b1e8ce0292adff3eb46ed https://www.encodeproject.org/files/ENCFF735UGM/@@download/ENCFF735UGM.bigBed hg19 released borderline replicate concordance, inconsistent platforms, control low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample, missing raw data in replicate poor library complexity, insufficient read depth, severe bottlenecking ENCFF132HHJ bigWig signal p-value ENCSR000AQI ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBBP5-human ENCAB000AKH DNA see document see document False 2012-03-06 ENCODE 1 ENCFF392XRJ, ENCFF713RXC 252579039 ENCODE Processing Pipeline e2713062badfa221578ba3236b71b6d4 https://www.encodeproject.org/files/ENCFF132HHJ/@@download/ENCFF132HHJ.bigWig GRCh38 released borderline replicate concordance, inconsistent platforms, control low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample, missing raw data in replicate poor library complexity, insufficient read depth, severe bottlenecking ENCFF221GIC bigWig fold change over control ENCSR000AQI ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBBP5-human ENCAB000AKH DNA see document see document False 2012-03-06 ENCODE 1 ENCFF392XRJ, ENCFF713RXC 154400979 ENCODE Processing Pipeline c658a0dcad6c27f312f3f49e85502e1a https://www.encodeproject.org/files/ENCFF221GIC/@@download/ENCFF221GIC.bigWig GRCh38 released borderline replicate concordance, inconsistent platforms, control low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample, missing raw data in replicate poor library complexity, insufficient read depth, severe bottlenecking ENCFF284WFI bigWig signal p-value ENCSR000AQI ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBBP5-human ENCAB000AKH DNA see document see document False 2012-03-06 ENCODE 2 ENCFF392XRJ, ENCFF550DDF, ENCFF829HZY 490323584 ENCODE Processing Pipeline 5ec85a394d41a16d17b0fe869e721d9e https://www.encodeproject.org/files/ENCFF284WFI/@@download/ENCFF284WFI.bigWig GRCh38 released borderline replicate concordance, inconsistent platforms, control low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample, missing raw data in replicate poor library complexity, insufficient read depth, severe bottlenecking ENCFF938YIR bigWig signal p-value ENCSR000AQI ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBBP5-human ENCAB000AKH DNA see document see document False 2012-03-06 ENCODE 1, 2 ENCFF392XRJ, ENCFF550DDF, ENCFF713RXC, ENCFF829HZY 655095993 ENCODE Processing Pipeline 65b7c78617de1ace144d48abb366363c https://www.encodeproject.org/files/ENCFF938YIR/@@download/ENCFF938YIR.bigWig GRCh38 released borderline replicate concordance, inconsistent platforms, control low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample, missing raw data in replicate poor library complexity, insufficient read depth, severe bottlenecking ENCFF694OAZ bigWig fold change over control ENCSR000AQI ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBBP5-human ENCAB000AKH DNA see document see document False 2012-03-06 ENCODE 2 ENCFF392XRJ, ENCFF550DDF, ENCFF829HZY 451967808 ENCODE Processing Pipeline fcdf01c48d6ba61487476b59fa82954c https://www.encodeproject.org/files/ENCFF694OAZ/@@download/ENCFF694OAZ.bigWig GRCh38 released borderline replicate concordance, inconsistent platforms, control low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample, missing raw data in replicate poor library complexity, insufficient read depth, severe bottlenecking ENCFF614LBP bigWig fold change over control ENCSR000AQI ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBBP5-human ENCAB000AKH DNA see document see document False 2012-03-06 ENCODE 1, 2 ENCFF392XRJ, ENCFF550DDF, ENCFF713RXC, ENCFF829HZY 595753206 ENCODE Processing Pipeline 270bceef07605f6e6a413b976cee4803 https://www.encodeproject.org/files/ENCFF614LBP/@@download/ENCFF614LBP.bigWig GRCh38 released borderline replicate concordance, inconsistent platforms, control low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample, missing raw data in replicate poor library complexity, insufficient read depth, severe bottlenecking ENCFF805AOR bed narrowPeak peaks ENCSR000AQI ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBBP5-human ENCAB000AKH DNA see document see document False 2012-03-06 ENCODE 2 ENCFF392XRJ, ENCFF550DDF, ENCFF829HZY 6843301 ENCODE Processing Pipeline 948ca6b287b4b9c17d5cdbe00ef0cfb1 https://www.encodeproject.org/files/ENCFF805AOR/@@download/ENCFF805AOR.bed.gz GRCh38 released borderline replicate concordance, inconsistent platforms, control low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample, missing raw data in replicate poor library complexity, insufficient read depth, severe bottlenecking ENCFF856CDH bigBed narrowPeak conservative idr thresholded peaks ENCSR000AQI ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBBP5-human ENCAB000AKH DNA see document see document False 2012-03-06 ENCODE 1, 2 ENCFF930OMM 764045 ENCODE Processing Pipeline 57cc462340c59057892d5a72ad68725b https://www.encodeproject.org/files/ENCFF856CDH/@@download/ENCFF856CDH.bigBed GRCh38 released borderline replicate concordance, inconsistent platforms, control low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample, missing raw data in replicate poor library complexity, insufficient read depth, severe bottlenecking ENCFF899YUP bed narrowPeak peaks ENCSR000AQI ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBBP5-human ENCAB000AKH DNA see document see document False 2012-03-06 ENCODE 1 ENCFF392XRJ, ENCFF713RXC 4215327 ENCODE Processing Pipeline 91c2f7ceb852450b1d9a162f5175d57c https://www.encodeproject.org/files/ENCFF899YUP/@@download/ENCFF899YUP.bed.gz GRCh38 released borderline replicate concordance, inconsistent platforms, control low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample, missing raw data in replicate poor library complexity, insufficient read depth, severe bottlenecking ENCFF134VON bigBed narrowPeak peaks ENCSR000AQI ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBBP5-human ENCAB000AKH DNA see document see document False 2012-03-06 ENCODE 1 ENCFF899YUP 9826507 ENCODE Processing Pipeline 99700df4ec09f598282bc75e7b8327ed https://www.encodeproject.org/files/ENCFF134VON/@@download/ENCFF134VON.bigBed GRCh38 released borderline replicate concordance, inconsistent platforms, control low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample, missing raw data in replicate poor library complexity, insufficient read depth, severe bottlenecking ENCFF666PCE bed narrowPeak optimal idr thresholded peaks ENCSR000AQI ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBBP5-human ENCAB000AKH DNA see document see document False 2012-03-06 ENCODE 1, 2 ENCFF419RSJ, ENCFF805AOR, ENCFF899YUP, ENCFF941HWG 444907 ENCODE Processing Pipeline 32519d91cf9265db07609fd8a27284a6 https://www.encodeproject.org/files/ENCFF666PCE/@@download/ENCFF666PCE.bed.gz GRCh38 released borderline replicate concordance, inconsistent platforms, control low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample, missing raw data in replicate poor library complexity, insufficient read depth, severe bottlenecking ENCFF941HWG bed narrowPeak peaks ENCSR000AQI ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBBP5-human ENCAB000AKH DNA see document see document False 2012-03-06 ENCODE 1, 2 ENCFF392XRJ, ENCFF550DDF, ENCFF713RXC, ENCFF829HZY 6980764 ENCODE Processing Pipeline 1ede3aef6419bc71acfe3c3819cf0121 https://www.encodeproject.org/files/ENCFF941HWG/@@download/ENCFF941HWG.bed.gz GRCh38 released borderline replicate concordance, inconsistent platforms, control low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample, missing raw data in replicate poor library complexity, insufficient read depth, severe bottlenecking ENCFF438TOM bigBed narrowPeak peaks ENCSR000AQI ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBBP5-human ENCAB000AKH DNA see document see document False 2012-03-06 ENCODE 2 ENCFF805AOR 12611231 ENCODE Processing Pipeline 33af09c677c8efd16efa29d489d5157c https://www.encodeproject.org/files/ENCFF438TOM/@@download/ENCFF438TOM.bigBed GRCh38 released borderline replicate concordance, inconsistent platforms, control low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample, missing raw data in replicate poor library complexity, insufficient read depth, severe bottlenecking ENCFF737CYI bigBed narrowPeak peaks ENCSR000AQI ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBBP5-human ENCAB000AKH DNA see document see document False 2012-03-06 ENCODE 1, 2 ENCFF941HWG 12657588 ENCODE Processing Pipeline 37b0b4a28b230e46f1130a9baae3f245 https://www.encodeproject.org/files/ENCFF737CYI/@@download/ENCFF737CYI.bigBed GRCh38 released borderline replicate concordance, inconsistent platforms, control low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample, missing raw data in replicate poor library complexity, insufficient read depth, severe bottlenecking ENCFF930OMM bed narrowPeak conservative idr thresholded peaks ENCSR000AQI ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBBP5-human ENCAB000AKH DNA see document see document False 2012-03-06 ENCODE 1, 2 ENCFF419RSJ, ENCFF805AOR, ENCFF899YUP, ENCFF941HWG 308367 ENCODE Processing Pipeline 7b1312155dffd40473bd76b65e3c05df https://www.encodeproject.org/files/ENCFF930OMM/@@download/ENCFF930OMM.bed.gz GRCh38 released borderline replicate concordance, inconsistent platforms, control low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample, missing raw data in replicate poor library complexity, insufficient read depth, severe bottlenecking ENCFF872IKE bigBed narrowPeak optimal idr thresholded peaks ENCSR000AQI ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBBP5-human ENCAB000AKH DNA see document see document False 2012-03-06 ENCODE 1, 2 ENCFF666PCE 1197436 ENCODE Processing Pipeline 439449205e0f50932e83960f9662620c https://www.encodeproject.org/files/ENCFF872IKE/@@download/ENCFF872IKE.bigBed GRCh38 released borderline replicate concordance, inconsistent platforms, control low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample, missing raw data in replicate poor library complexity, insufficient read depth, severe bottlenecking ENCFF000CBS bigBed broadPeak peaks ENCSR000AQJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SAP30-human ENCAB000AKO DNA see document see document False 2012-03-06 ENCODE ENCFF001TAF 6110373 Bradley Bernstein, Broad bcd3d43248fc868d83dc7c9c5c603c42 https://www.encodeproject.org/files/ENCFF000CBS/@@download/ENCFF000CBS.bigBed hg19 archived borderline replicate concordance, inconsistent platforms, control low read depth, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample, missing raw data in replicate poor library complexity, insufficient read depth, severe bottlenecking ENCFF000CBT bam alignments ENCSR000AQJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SAP30-human ENCAB000AKO DNA see document see document False 2012-03-06 ENCODE 2 1 794667338 Bradley Bernstein, Broad 0685ed43c42c9def181f236ca3e53cde https://www.encodeproject.org/files/ENCFF000CBT/@@download/ENCFF000CBT.bam hg19 archived borderline replicate concordance, inconsistent platforms, control low read depth, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample, missing raw data in replicate, missing derived_from poor library complexity, insufficient read depth, severe bottlenecking ENCFF000CBU bam alignments ENCSR000AQJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SAP30-human ENCAB000AKO DNA see document see document False 2012-03-06 ENCODE 1 1 1061671464 Bradley Bernstein, Broad 1e4c7440b4732fe7508e0e160ab14e9a https://www.encodeproject.org/files/ENCFF000CBU/@@download/ENCFF000CBU.bam hg19 archived borderline replicate concordance, inconsistent platforms, control low read depth, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample, missing raw data in replicate, missing derived_from poor library complexity, insufficient read depth, severe bottlenecking ENCFF000CBV bigWig signal ENCSR000AQJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SAP30-human ENCAB000AKO DNA see document see document False 2012-03-06 ENCODE 344567925 Bradley Bernstein, Broad 23110f463ef0664eadc9d2ad9ad4753d https://www.encodeproject.org/files/ENCFF000CBV/@@download/ENCFF000CBV.bigWig hg19 archived borderline replicate concordance, inconsistent platforms, control low read depth, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample, missing derived_from, missing raw data in replicate poor library complexity, insufficient read depth, severe bottlenecking ENCFF001TAF bed broadPeak peaks ENCSR000AQJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SAP30-human ENCAB000AKO DNA see document see document False 2012-03-06 ENCODE 3537308 Bradley Bernstein, Broad 3a946e3353e1e785735deeff1cf1636f https://www.encodeproject.org/files/ENCFF001TAF/@@download/ENCFF001TAF.bed.gz hg19 archived borderline replicate concordance, inconsistent platforms, control low read depth, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample, missing raw data in replicate, missing derived_from poor library complexity, insufficient read depth, severe bottlenecking ENCFF002CEV bed narrowPeak optimal idr thresholded peaks ENCSR000AQJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SAP30-human ENCAB000AKO DNA see document see document False 2012-03-06 ENCODE 217610 ENCODE Consortium Analysis Working Group a5df7c305af05ffe464e505e160dd1d5 https://www.encodeproject.org/files/ENCFF002CEV/@@download/ENCFF002CEV.bed.gz hg19 archived borderline replicate concordance, inconsistent platforms, control low read depth, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample, missing derived_from, missing raw data in replicate poor library complexity, insufficient read depth, severe bottlenecking ENCFF242YXH bigBed narrowPeak optimal idr thresholded peaks ENCSR000AQJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SAP30-human ENCAB000AKO DNA see document see document False 2012-03-06 ENCODE ENCFF002CEV 627288 ENCODE Consortium e796eb0868bce4c5a15d49a8ca3fa7c4 https://www.encodeproject.org/files/ENCFF242YXH/@@download/ENCFF242YXH.bigBed hg19 archived borderline replicate concordance, inconsistent platforms, control low read depth, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample, missing raw data in replicate poor library complexity, insufficient read depth, severe bottlenecking ENCFF531OCK fastq reads ENCSR000AQJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SAP30-human ENCAB000AKO DNA see document see document False 2012-03-06 ENCODE 2 1 36 single-ended 1306927480 Bradley Bernstein, Broad cff3c8f72357616045b150d6c73fca9e https://www.encodeproject.org/files/ENCFF531OCK/@@download/ENCFF531OCK.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF283HQV/, /files/ENCFF994FIB/ released borderline replicate concordance, inconsistent platforms, control low read depth, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample, missing raw data in replicate poor library complexity, insufficient read depth, severe bottlenecking ENCFF873QQB fastq reads ENCSR000AQJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SAP30-human ENCAB000AKO DNA see document see document False 2012-03-06 ENCODE 1 1 36 single-ended 1424633906 Bradley Bernstein, Broad 4ff6fc59a57ab1f48f06f6a518871667 https://www.encodeproject.org/files/ENCFF873QQB/@@download/ENCFF873QQB.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000BWK/ released borderline replicate concordance, inconsistent platforms, control low read depth, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample, missing raw data in replicate poor library complexity, insufficient read depth, severe bottlenecking ENCFF693YKU fastq reads ENCSR000AQJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SAP30-human ENCAB000AKO DNA see document see document False 2012-03-06 ENCODE 3 1 25 paired-ended 1 ENCFF124BQG 1186123827 Bradley Bernstein, Broad 29c027fa05f37158577e8fcf39f5c644 https://www.encodeproject.org/files/ENCFF693YKU/@@download/ENCFF693YKU.fastq.gz Illumina HiSeq 2500 archived borderline replicate concordance, inconsistent platforms, control low read depth, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample, missing raw data in replicate missing controlled_by, poor library complexity, insufficient read depth, severe bottlenecking ENCFF124BQG fastq reads ENCSR000AQJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SAP30-human ENCAB000AKO DNA see document see document False 2012-03-06 ENCODE 3 1 25 paired-ended 2 ENCFF693YKU 1197224974 Bradley Bernstein, Broad 2abc637535c07994072b6a4fd48eb389 https://www.encodeproject.org/files/ENCFF124BQG/@@download/ENCFF124BQG.fastq.gz Illumina HiSeq 2500 archived borderline replicate concordance, inconsistent platforms, control low read depth, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample, missing raw data in replicate severe bottlenecking, poor library complexity, insufficient read depth, missing controlled_by ENCFF548SYQ bam unfiltered alignments ENCSR000AQJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SAP30-human ENCAB000AKO DNA see document see document False 2012-03-06 ENCODE 2 36 ENCFF531OCK, ENCFF807MUK 1560899070 ENCODE Processing Pipeline 23e036068787485dc7ed3bcda180a002 https://www.encodeproject.org/files/ENCFF548SYQ/@@download/ENCFF548SYQ.bam hg19 released borderline replicate concordance, inconsistent platforms, control low read depth, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample, missing raw data in replicate poor library complexity, insufficient read depth, severe bottlenecking ENCFF106SWN bam unfiltered alignments ENCSR000AQJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SAP30-human ENCAB000AKO DNA see document see document False 2012-03-06 ENCODE 2 36 ENCFF531OCK, ENCFF643CGH 1567192432 ENCODE Processing Pipeline d586fd14472f54467659ca00265db657 https://www.encodeproject.org/files/ENCFF106SWN/@@download/ENCFF106SWN.bam GRCh38 released borderline replicate concordance, inconsistent platforms, control low read depth, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample, missing raw data in replicate poor library complexity, insufficient read depth, severe bottlenecking ENCFF187CGT bam alignments ENCSR000AQJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SAP30-human ENCAB000AKO DNA see document see document False 2012-03-06 ENCODE 2 36 ENCFF531OCK, ENCFF807MUK 332206912 ENCODE Processing Pipeline 447a8e6638f4db0928974ab2b11e67f0 https://www.encodeproject.org/files/ENCFF187CGT/@@download/ENCFF187CGT.bam hg19 released borderline replicate concordance, inconsistent platforms, control low read depth, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample, missing raw data in replicate poor library complexity, insufficient read depth, severe bottlenecking ENCFF416LJL bam alignments ENCSR000AQJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SAP30-human ENCAB000AKO DNA see document see document False 2012-03-06 ENCODE 1 36 ENCFF643CGH, ENCFF873QQB 506927863 ENCODE Processing Pipeline 89b5bd3c8c099013ce72359c181dc488 https://www.encodeproject.org/files/ENCFF416LJL/@@download/ENCFF416LJL.bam GRCh38 released borderline replicate concordance, inconsistent platforms, control low read depth, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample, missing raw data in replicate poor library complexity, insufficient read depth, severe bottlenecking ENCFF243TCE bam unfiltered alignments ENCSR000AQJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SAP30-human ENCAB000AKO DNA see document see document False 2012-03-06 ENCODE 1 36 ENCFF643CGH, ENCFF873QQB 1758122369 ENCODE Processing Pipeline 5d310cf468b21cc2ae0649b2d54afacd https://www.encodeproject.org/files/ENCFF243TCE/@@download/ENCFF243TCE.bam GRCh38 released borderline replicate concordance, inconsistent platforms, control low read depth, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample, missing raw data in replicate poor library complexity, insufficient read depth, severe bottlenecking ENCFF573CDD bam unfiltered alignments ENCSR000AQJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SAP30-human ENCAB000AKO DNA see document see document False 2012-03-06 ENCODE 1 36 ENCFF807MUK, ENCFF873QQB 1751061178 ENCODE Processing Pipeline c4416027983d6d78b9d45b2b4a8a27fe https://www.encodeproject.org/files/ENCFF573CDD/@@download/ENCFF573CDD.bam hg19 released borderline replicate concordance, inconsistent platforms, control low read depth, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample, missing raw data in replicate poor library complexity, insufficient read depth, severe bottlenecking ENCFF536GLO bam alignments ENCSR000AQJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SAP30-human ENCAB000AKO DNA see document see document False 2012-03-06 ENCODE 1 36 ENCFF807MUK, ENCFF873QQB 507393688 ENCODE Processing Pipeline ed8d1fb6061be1de84a72992a0e536a6 https://www.encodeproject.org/files/ENCFF536GLO/@@download/ENCFF536GLO.bam hg19 released borderline replicate concordance, inconsistent platforms, control low read depth, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample, missing raw data in replicate poor library complexity, insufficient read depth, severe bottlenecking ENCFF961HAZ bam alignments ENCSR000AQJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SAP30-human ENCAB000AKO DNA see document see document False 2012-03-06 ENCODE 2 36 ENCFF531OCK, ENCFF643CGH 331966338 ENCODE Processing Pipeline a16d6f763c3ca4699ad409dca82ac7c3 https://www.encodeproject.org/files/ENCFF961HAZ/@@download/ENCFF961HAZ.bam GRCh38 released borderline replicate concordance, inconsistent platforms, control low read depth, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample, missing raw data in replicate poor library complexity, insufficient read depth, severe bottlenecking ENCFF946JUM bigWig signal p-value ENCSR000AQJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SAP30-human ENCAB000AKO DNA see document see document False 2012-03-06 ENCODE 1 ENCFF536GLO, ENCFF574XYY 333522087 ENCODE Processing Pipeline d1018aa7c0bc635e2fe4e0e2496c8b34 https://www.encodeproject.org/files/ENCFF946JUM/@@download/ENCFF946JUM.bigWig hg19 released borderline replicate concordance, inconsistent platforms, control low read depth, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample, missing raw data in replicate poor library complexity, insufficient read depth, severe bottlenecking ENCFF823GGP bigWig fold change over control ENCSR000AQJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SAP30-human ENCAB000AKO DNA see document see document False 2012-03-06 ENCODE 1 ENCFF536GLO, ENCFF574XYY 223974398 ENCODE Processing Pipeline 78f94a3525c056d1427a71808317abe6 https://www.encodeproject.org/files/ENCFF823GGP/@@download/ENCFF823GGP.bigWig hg19 released borderline replicate concordance, inconsistent platforms, control low read depth, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample, missing raw data in replicate poor library complexity, insufficient read depth, severe bottlenecking ENCFF414KIO bigWig signal p-value ENCSR000AQJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SAP30-human ENCAB000AKO DNA see document see document False 2012-03-06 ENCODE 1 ENCFF392XRJ, ENCFF416LJL 304986091 ENCODE Processing Pipeline 34813ba620075f7dad29efb72d9d6e7b https://www.encodeproject.org/files/ENCFF414KIO/@@download/ENCFF414KIO.bigWig GRCh38 released borderline replicate concordance, inconsistent platforms, control low read depth, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample, missing raw data in replicate poor library complexity, insufficient read depth, severe bottlenecking ENCFF108SDW bigWig signal p-value ENCSR000AQJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SAP30-human ENCAB000AKO DNA see document see document False 2012-03-06 ENCODE 2 ENCFF187CGT, ENCFF245PJA 269408866 ENCODE Processing Pipeline 8e6a71c9b943be7af6b80adbc5b966cb https://www.encodeproject.org/files/ENCFF108SDW/@@download/ENCFF108SDW.bigWig hg19 released borderline replicate concordance, inconsistent platforms, control low read depth, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample, missing raw data in replicate poor library complexity, insufficient read depth, severe bottlenecking ENCFF190SLM bigWig fold change over control ENCSR000AQJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SAP30-human ENCAB000AKO DNA see document see document False 2012-03-06 ENCODE 1 ENCFF392XRJ, ENCFF416LJL 223432074 ENCODE Processing Pipeline 3bd02e9d14bd58c1c9b93b6d92888195 https://www.encodeproject.org/files/ENCFF190SLM/@@download/ENCFF190SLM.bigWig GRCh38 released borderline replicate concordance, inconsistent platforms, control low read depth, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample, missing raw data in replicate poor library complexity, insufficient read depth, severe bottlenecking ENCFF874IOX bigWig signal p-value ENCSR000AQJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SAP30-human ENCAB000AKO DNA see document see document False 2012-03-06 ENCODE 2 ENCFF829HZY, ENCFF961HAZ 271464472 ENCODE Processing Pipeline 35b4f8413b20a98bbe164aa6db0e14ff https://www.encodeproject.org/files/ENCFF874IOX/@@download/ENCFF874IOX.bigWig GRCh38 released borderline replicate concordance, inconsistent platforms, control low read depth, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample, missing raw data in replicate poor library complexity, insufficient read depth, severe bottlenecking ENCFF900SDF bigWig signal p-value ENCSR000AQJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SAP30-human ENCAB000AKO DNA see document see document False 2012-03-06 ENCODE 1, 2 ENCFF392XRJ, ENCFF416LJL, ENCFF829HZY, ENCFF961HAZ 591910250 ENCODE Processing Pipeline 563dd4d3acaca2c5e6538563a6e8871a https://www.encodeproject.org/files/ENCFF900SDF/@@download/ENCFF900SDF.bigWig GRCh38 released borderline replicate concordance, inconsistent platforms, control low read depth, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample, missing raw data in replicate poor library complexity, insufficient read depth, severe bottlenecking ENCFF899OJV bigWig fold change over control ENCSR000AQJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SAP30-human ENCAB000AKO DNA see document see document False 2012-03-06 ENCODE 1, 2 ENCFF392XRJ, ENCFF416LJL, ENCFF829HZY, ENCFF961HAZ 422070990 ENCODE Processing Pipeline e9fb72722bd4efdddf1c686319fa8fd8 https://www.encodeproject.org/files/ENCFF899OJV/@@download/ENCFF899OJV.bigWig GRCh38 released borderline replicate concordance, inconsistent platforms, control low read depth, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample, missing raw data in replicate poor library complexity, insufficient read depth, severe bottlenecking ENCFF800HOP bigBed narrowPeak peaks ENCSR000AQJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SAP30-human ENCAB000AKO DNA see document see document False 2012-03-06 ENCODE 1 ENCFF081GEA 12749792 ENCODE Processing Pipeline 592f88d585967ad2922d6ead5afe4cd0 https://www.encodeproject.org/files/ENCFF800HOP/@@download/ENCFF800HOP.bigBed hg19 released borderline replicate concordance, inconsistent platforms, control low read depth, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample, missing raw data in replicate poor library complexity, insufficient read depth, severe bottlenecking ENCFF325OIN bed narrowPeak peaks ENCSR000AQJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SAP30-human ENCAB000AKO DNA see document see document False 2012-03-06 ENCODE 2 ENCFF829HZY, ENCFF961HAZ 3774957 ENCODE Processing Pipeline 12bc331790d82cb9eb9a34b7cd820d8b https://www.encodeproject.org/files/ENCFF325OIN/@@download/ENCFF325OIN.bed.gz GRCh38 released borderline replicate concordance, inconsistent platforms, control low read depth, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample, missing raw data in replicate poor library complexity, insufficient read depth, severe bottlenecking ENCFF724JVF bed narrowPeak peaks ENCSR000AQJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SAP30-human ENCAB000AKO DNA see document see document False 2012-03-06 ENCODE 1, 2 ENCFF392XRJ, ENCFF416LJL, ENCFF829HZY, ENCFF961HAZ 5639671 ENCODE Processing Pipeline b9a89fc0247de9283709d7e89c87966e https://www.encodeproject.org/files/ENCFF724JVF/@@download/ENCFF724JVF.bed.gz GRCh38 released borderline replicate concordance, inconsistent platforms, control low read depth, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample, missing raw data in replicate poor library complexity, insufficient read depth, severe bottlenecking ENCFF103RHL bed narrowPeak optimal idr thresholded peaks ENCSR000AQJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SAP30-human ENCAB000AKO DNA see document see document False 2012-03-06 ENCODE 1, 2 ENCFF325OIN, ENCFF419RSJ, ENCFF724JVF, ENCFF838VDJ 251066 ENCODE Processing Pipeline 5e36859e8973d66a657e5842fa816c16 https://www.encodeproject.org/files/ENCFF103RHL/@@download/ENCFF103RHL.bed.gz GRCh38 released borderline replicate concordance, inconsistent platforms, control low read depth, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample, missing raw data in replicate poor library complexity, insufficient read depth, severe bottlenecking ENCFF442SFR bigWig signal p-value ENCSR000AQJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SAP30-human ENCAB000AKO DNA see document see document False 2012-03-06 ENCODE 1, 2 ENCFF187CGT, ENCFF245PJA, ENCFF536GLO, ENCFF574XYY 535063588 ENCODE Processing Pipeline 8673a02055b82fdb18acd3d436f2fdeb https://www.encodeproject.org/files/ENCFF442SFR/@@download/ENCFF442SFR.bigWig hg19 released borderline replicate concordance, inconsistent platforms, control low read depth, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample, missing raw data in replicate poor library complexity, insufficient read depth, severe bottlenecking ENCFF643AZY bed narrowPeak peaks ENCSR000AQJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SAP30-human ENCAB000AKO DNA see document see document False 2012-03-06 ENCODE 2 ENCFF187CGT, ENCFF245PJA 3780692 ENCODE Processing Pipeline 74b066a2b4a0716e0f843177511226d9 https://www.encodeproject.org/files/ENCFF643AZY/@@download/ENCFF643AZY.bed.gz hg19 released borderline replicate concordance, inconsistent platforms, control low read depth, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample, missing raw data in replicate poor library complexity, insufficient read depth, severe bottlenecking ENCFF016IWL bigBed narrowPeak peaks ENCSR000AQJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SAP30-human ENCAB000AKO DNA see document see document False 2012-03-06 ENCODE 1, 2 ENCFF956WWZ 13257318 ENCODE Processing Pipeline bb4b52b5c05ba99819252a584e56f69e https://www.encodeproject.org/files/ENCFF016IWL/@@download/ENCFF016IWL.bigBed hg19 released borderline replicate concordance, inconsistent platforms, control low read depth, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample, missing raw data in replicate poor library complexity, insufficient read depth, severe bottlenecking ENCFF235UDJ bed narrowPeak conservative idr thresholded peaks ENCSR000AQJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SAP30-human ENCAB000AKO DNA see document see document False 2012-03-06 ENCODE 1, 2 ENCFF325OIN, ENCFF419RSJ, ENCFF724JVF, ENCFF838VDJ 150717 ENCODE Processing Pipeline 501e463fde4f64f1f89e74bf8339cfd9 https://www.encodeproject.org/files/ENCFF235UDJ/@@download/ENCFF235UDJ.bed.gz GRCh38 released borderline replicate concordance, inconsistent platforms, control low read depth, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample, missing raw data in replicate poor library complexity, insufficient read depth, severe bottlenecking ENCFF144JME bigBed narrowPeak conservative idr thresholded peaks ENCSR000AQJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SAP30-human ENCAB000AKO DNA see document see document False 2012-03-06 ENCODE 1, 2 ENCFF235UDJ 375876 ENCODE Processing Pipeline b51fa0ed4db2aa9db7173a83fd7b717b https://www.encodeproject.org/files/ENCFF144JME/@@download/ENCFF144JME.bigBed GRCh38 released borderline replicate concordance, inconsistent platforms, control low read depth, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample, missing raw data in replicate poor library complexity, insufficient read depth, severe bottlenecking ENCFF838VDJ bed narrowPeak peaks ENCSR000AQJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SAP30-human ENCAB000AKO DNA see document see document False 2012-03-06 ENCODE 1 ENCFF392XRJ, ENCFF416LJL 4814033 ENCODE Processing Pipeline 20dc27e84a8a8cb1d14998b8fc895d47 https://www.encodeproject.org/files/ENCFF838VDJ/@@download/ENCFF838VDJ.bed.gz GRCh38 released borderline replicate concordance, inconsistent platforms, control low read depth, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample, missing raw data in replicate poor library complexity, insufficient read depth, severe bottlenecking ENCFF427QQM bigBed narrowPeak peaks ENCSR000AQJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SAP30-human ENCAB000AKO DNA see document see document False 2012-03-06 ENCODE 1 ENCFF838VDJ 12805962 ENCODE Processing Pipeline 0e9dbb51a62a83afa600b3a2ecc7e258 https://www.encodeproject.org/files/ENCFF427QQM/@@download/ENCFF427QQM.bigBed GRCh38 released borderline replicate concordance, inconsistent platforms, control low read depth, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample, missing raw data in replicate poor library complexity, insufficient read depth, severe bottlenecking ENCFF845NPC bigBed narrowPeak conservative idr thresholded peaks ENCSR000AQJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SAP30-human ENCAB000AKO DNA see document see document False 2012-03-06 ENCODE 1, 2 ENCFF864EKR 380397 ENCODE Processing Pipeline 8676fb9c9c17ade2608298129a99d527 https://www.encodeproject.org/files/ENCFF845NPC/@@download/ENCFF845NPC.bigBed hg19 released borderline replicate concordance, inconsistent platforms, control low read depth, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample, missing raw data in replicate poor library complexity, insufficient read depth, severe bottlenecking ENCFF480PLD bigBed narrowPeak peaks ENCSR000AQJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SAP30-human ENCAB000AKO DNA see document see document False 2012-03-06 ENCODE 1, 2 ENCFF724JVF 13279532 ENCODE Processing Pipeline 90b9c48f1f0d76659a040da7fc5cddfe https://www.encodeproject.org/files/ENCFF480PLD/@@download/ENCFF480PLD.bigBed GRCh38 released borderline replicate concordance, inconsistent platforms, control low read depth, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample, missing raw data in replicate poor library complexity, insufficient read depth, severe bottlenecking ENCFF970LBJ bigWig fold change over control ENCSR000AQJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SAP30-human ENCAB000AKO DNA see document see document False 2012-03-06 ENCODE 2 ENCFF187CGT, ENCFF245PJA 172023662 ENCODE Processing Pipeline 6abc220b54c20e8cf93f404b5fb0813b https://www.encodeproject.org/files/ENCFF970LBJ/@@download/ENCFF970LBJ.bigWig hg19 released borderline replicate concordance, inconsistent platforms, control low read depth, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample, missing raw data in replicate poor library complexity, insufficient read depth, severe bottlenecking ENCFF448ELA bigWig fold change over control ENCSR000AQJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SAP30-human ENCAB000AKO DNA see document see document False 2012-03-06 ENCODE 2 ENCFF829HZY, ENCFF961HAZ 170366045 ENCODE Processing Pipeline d988a64f42072e084ba8fcf913e80a3d https://www.encodeproject.org/files/ENCFF448ELA/@@download/ENCFF448ELA.bigWig GRCh38 released borderline replicate concordance, inconsistent platforms, control low read depth, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample, missing raw data in replicate poor library complexity, insufficient read depth, severe bottlenecking ENCFF816KCQ bigWig fold change over control ENCSR000AQJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SAP30-human ENCAB000AKO DNA see document see document False 2012-03-06 ENCODE 1, 2 ENCFF187CGT, ENCFF245PJA, ENCFF536GLO, ENCFF574XYY 426462051 ENCODE Processing Pipeline f89809c2efe0499772cb64de97c7fdac https://www.encodeproject.org/files/ENCFF816KCQ/@@download/ENCFF816KCQ.bigWig hg19 released borderline replicate concordance, inconsistent platforms, control low read depth, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample, missing raw data in replicate poor library complexity, insufficient read depth, severe bottlenecking ENCFF956WWZ bed narrowPeak peaks ENCSR000AQJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SAP30-human ENCAB000AKO DNA see document see document False 2012-03-06 ENCODE 1, 2 ENCFF187CGT, ENCFF245PJA, ENCFF536GLO, ENCFF574XYY 5643911 ENCODE Processing Pipeline 0e16d8a8ab45ce013458b9a714cf8e58 https://www.encodeproject.org/files/ENCFF956WWZ/@@download/ENCFF956WWZ.bed.gz hg19 released borderline replicate concordance, inconsistent platforms, control low read depth, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample, missing raw data in replicate poor library complexity, insufficient read depth, severe bottlenecking ENCFF475BBC bigBed narrowPeak peaks ENCSR000AQJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SAP30-human ENCAB000AKO DNA see document see document False 2012-03-06 ENCODE 2 ENCFF643AZY 9481369 ENCODE Processing Pipeline fb2e58192e010ae808b403db9b0769e2 https://www.encodeproject.org/files/ENCFF475BBC/@@download/ENCFF475BBC.bigBed hg19 released borderline replicate concordance, inconsistent platforms, control low read depth, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample, missing raw data in replicate poor library complexity, insufficient read depth, severe bottlenecking ENCFF842BKE bigBed narrowPeak peaks ENCSR000AQJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SAP30-human ENCAB000AKO DNA see document see document False 2012-03-06 ENCODE 2 ENCFF325OIN 9492147 ENCODE Processing Pipeline 074a0a12d83bc1648f73a810f2d6b7c3 https://www.encodeproject.org/files/ENCFF842BKE/@@download/ENCFF842BKE.bigBed GRCh38 released borderline replicate concordance, inconsistent platforms, control low read depth, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample, missing raw data in replicate poor library complexity, insufficient read depth, severe bottlenecking ENCFF931BQF bigBed narrowPeak optimal idr thresholded peaks ENCSR000AQJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SAP30-human ENCAB000AKO DNA see document see document False 2012-03-06 ENCODE 1, 2 ENCFF718NUA 631792 ENCODE Processing Pipeline c92d273ce5d32f64a15b7d787f23ef58 https://www.encodeproject.org/files/ENCFF931BQF/@@download/ENCFF931BQF.bigBed hg19 released borderline replicate concordance, inconsistent platforms, control low read depth, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample, missing raw data in replicate poor library complexity, insufficient read depth, severe bottlenecking ENCFF081GEA bed narrowPeak peaks ENCSR000AQJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SAP30-human ENCAB000AKO DNA see document see document False 2012-03-06 ENCODE 1 ENCFF536GLO, ENCFF574XYY 4808755 ENCODE Processing Pipeline 6f68aa14b9f8380db9f70eb8c31d042a https://www.encodeproject.org/files/ENCFF081GEA/@@download/ENCFF081GEA.bed.gz hg19 released borderline replicate concordance, inconsistent platforms, control low read depth, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample, missing raw data in replicate poor library complexity, insufficient read depth, severe bottlenecking ENCFF864EKR bed narrowPeak conservative idr thresholded peaks ENCSR000AQJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SAP30-human ENCAB000AKO DNA see document see document False 2012-03-06 ENCODE 1, 2 ENCFF001TDO, ENCFF081GEA, ENCFF643AZY, ENCFF956WWZ 154360 ENCODE Processing Pipeline b2deae8cbb674788755593336acec2fb https://www.encodeproject.org/files/ENCFF864EKR/@@download/ENCFF864EKR.bed.gz hg19 released borderline replicate concordance, inconsistent platforms, control low read depth, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample, missing raw data in replicate poor library complexity, insufficient read depth, severe bottlenecking ENCFF718NUA bed narrowPeak optimal idr thresholded peaks ENCSR000AQJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SAP30-human ENCAB000AKO DNA see document see document False 2012-03-06 ENCODE 1, 2 ENCFF001TDO, ENCFF081GEA, ENCFF643AZY, ENCFF956WWZ 249328 ENCODE Processing Pipeline 994d55aff4a2588ec824b795125a1166 https://www.encodeproject.org/files/ENCFF718NUA/@@download/ENCFF718NUA.bed.gz hg19 released borderline replicate concordance, inconsistent platforms, control low read depth, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample, missing raw data in replicate poor library complexity, insufficient read depth, severe bottlenecking ENCFF634UIS bigBed narrowPeak optimal idr thresholded peaks ENCSR000AQJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SAP30-human ENCAB000AKO DNA see document see document False 2012-03-06 ENCODE 1, 2 ENCFF103RHL 637255 ENCODE Processing Pipeline f62401e97457a30b22fc29418967de2e https://www.encodeproject.org/files/ENCFF634UIS/@@download/ENCFF634UIS.bigBed GRCh38 released borderline replicate concordance, inconsistent platforms, control low read depth, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample, missing raw data in replicate poor library complexity, insufficient read depth, severe bottlenecking ENCFF391FDK bam unfiltered alignments ENCSR388QZF ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB857ZMJ DNA False 2016-09-27 ENCODE 2 100 ENCFF698ICA, ENCFF807MUK, ENCFF839LPL 5022137187 ENCODE Processing Pipeline c6b9b36aa56bd852a172a651be4c3daf https://www.encodeproject.org/files/ENCFF391FDK/@@download/ENCFF391FDK.bam hg19 released low read depth ENCFF394HFT bam unfiltered alignments ENCSR388QZF ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB857ZMJ DNA False 2016-09-27 ENCODE 1 100 ENCFF400NVU, ENCFF807MUK, ENCFF920SBM 4016296514 ENCODE Processing Pipeline 9c964b79a5b8a9ecd21d71dba8a50c9f https://www.encodeproject.org/files/ENCFF394HFT/@@download/ENCFF394HFT.bam hg19 released low read depth ENCFF839LPL fastq reads ENCSR388QZF ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB857ZMJ DNA False 2016-09-27 ENCODE 2 1 100 paired-ended 1 ENCFF698ICA 2434855785 Michael Snyder, Stanford 27e65b059226dbf9f18f1aad91678ada SRA:SRR5111543 https://www.encodeproject.org/files/ENCFF839LPL/@@download/ENCFF839LPL.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFD/ released low read depth ENCFF698ICA fastq reads ENCSR388QZF ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB857ZMJ DNA False 2016-09-27 ENCODE 2 1 100 paired-ended 2 ENCFF839LPL 2475345280 Michael Snyder, Stanford 78222056a75c1fb596a6eeaa195593e1 SRA:SRR5111543 https://www.encodeproject.org/files/ENCFF698ICA/@@download/ENCFF698ICA.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFA/ released low read depth ENCFF920SBM fastq reads ENCSR388QZF ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB857ZMJ DNA False 2016-09-27 ENCODE 1 1 100 paired-ended 1 ENCFF400NVU 1861855451 Michael Snyder, Stanford 58c585a0026f264702f65e5f32a4d5ba SRA:SRR5111542 https://www.encodeproject.org/files/ENCFF920SBM/@@download/ENCFF920SBM.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFF/ released low read depth ENCFF400NVU fastq reads ENCSR388QZF ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB857ZMJ DNA False 2016-09-27 ENCODE 1 1 100 paired-ended 2 ENCFF920SBM 1898649414 Michael Snyder, Stanford b93eac550784691589041df86a252ec9 SRA:SRR5111542 https://www.encodeproject.org/files/ENCFF400NVU/@@download/ENCFF400NVU.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFH/ released low read depth ENCFF839GLQ bam alignments ENCSR388QZF ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB857ZMJ DNA False 2016-09-27 ENCODE 2 100 ENCFF698ICA, ENCFF807MUK, ENCFF839LPL 4288292713 ENCODE Processing Pipeline 4ce0e20104fbb50578aef291abcc147d https://www.encodeproject.org/files/ENCFF839GLQ/@@download/ENCFF839GLQ.bam hg19 released low read depth ENCFF138LNW bam alignments ENCSR388QZF ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB857ZMJ DNA False 2016-09-27 ENCODE 1 100 ENCFF400NVU, ENCFF807MUK, ENCFF920SBM 3492763395 ENCODE Processing Pipeline 6c3630e808f2c33d70183d85203e41d3 https://www.encodeproject.org/files/ENCFF138LNW/@@download/ENCFF138LNW.bam hg19 released low read depth ENCFF366YKO bigWig signal p-value ENCSR388QZF ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB857ZMJ DNA False 2016-09-27 ENCODE 1 ENCFF138LNW, ENCFF581ZJL 1062459959 ENCODE Processing Pipeline f472b58df583ed3831d7a23973895c55 https://www.encodeproject.org/files/ENCFF366YKO/@@download/ENCFF366YKO.bigWig hg19 released low read depth ENCFF129MIK bigWig signal p-value ENCSR388QZF ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB857ZMJ DNA False 2016-09-27 ENCODE 2 ENCFF051LWI, ENCFF839GLQ 1097097473 ENCODE Processing Pipeline 2b5075ae160d0df5dd6712118bb23f04 https://www.encodeproject.org/files/ENCFF129MIK/@@download/ENCFF129MIK.bigWig hg19 released low read depth ENCFF518XWE bigWig signal p-value ENCSR388QZF ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB857ZMJ DNA False 2016-09-27 ENCODE 1, 2 ENCFF051LWI, ENCFF138LNW, ENCFF581ZJL, ENCFF839GLQ 1774645709 ENCODE Processing Pipeline 1abcbb415d4456d2a603b1c4e8cad249 https://www.encodeproject.org/files/ENCFF518XWE/@@download/ENCFF518XWE.bigWig hg19 released low read depth ENCFF555CHY bigWig fold change over control ENCSR388QZF ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB857ZMJ DNA False 2016-09-27 ENCODE 1 ENCFF138LNW, ENCFF581ZJL 1001654834 ENCODE Processing Pipeline 5356ca26fbd5c071657de285c418b64c https://www.encodeproject.org/files/ENCFF555CHY/@@download/ENCFF555CHY.bigWig hg19 released low read depth ENCFF910GGT bigWig fold change over control ENCSR388QZF ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB857ZMJ DNA False 2016-09-27 ENCODE 2 ENCFF051LWI, ENCFF839GLQ 1019176065 ENCODE Processing Pipeline 43d9123b62b8bcb6a25bddde26b8238a https://www.encodeproject.org/files/ENCFF910GGT/@@download/ENCFF910GGT.bigWig hg19 released low read depth ENCFF647MSS bigWig fold change over control ENCSR388QZF ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB857ZMJ DNA False 2016-09-27 ENCODE 1, 2 ENCFF051LWI, ENCFF138LNW, ENCFF581ZJL, ENCFF839GLQ 1903451733 ENCODE Processing Pipeline 0d53a1d124354427019c1f43e5661279 https://www.encodeproject.org/files/ENCFF647MSS/@@download/ENCFF647MSS.bigWig hg19 released low read depth ENCFF157PBO bed narrowPeak peaks ENCSR388QZF ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB857ZMJ DNA False 2016-09-27 ENCODE 1 ENCFF138LNW, ENCFF581ZJL 7197429 ENCODE Processing Pipeline 0af8663cfafe4ae8f1f42901e348933e https://www.encodeproject.org/files/ENCFF157PBO/@@download/ENCFF157PBO.bed.gz hg19 released low read depth ENCFF109VMO bed narrowPeak peaks ENCSR388QZF ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB857ZMJ DNA False 2016-09-27 ENCODE 2 ENCFF051LWI, ENCFF839GLQ 7254397 ENCODE Processing Pipeline 946487180b55d5e1e6a68781d9572952 https://www.encodeproject.org/files/ENCFF109VMO/@@download/ENCFF109VMO.bed.gz hg19 released low read depth ENCFF656WXD bed narrowPeak peaks ENCSR388QZF ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB857ZMJ DNA False 2016-09-27 ENCODE 1, 2 ENCFF051LWI, ENCFF138LNW, ENCFF581ZJL, ENCFF839GLQ 7295050 ENCODE Processing Pipeline 15bc7c82e626a458d3a5a1cbc17cce62 https://www.encodeproject.org/files/ENCFF656WXD/@@download/ENCFF656WXD.bed.gz hg19 released low read depth ENCFF151EKY bigBed narrowPeak peaks ENCSR388QZF ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB857ZMJ DNA False 2016-09-27 ENCODE 1 ENCFF157PBO 12015998 ENCODE Processing Pipeline 8c8c51d150ce171e92718bd713c7f37e https://www.encodeproject.org/files/ENCFF151EKY/@@download/ENCFF151EKY.bigBed hg19 released low read depth ENCFF852NAG bigBed narrowPeak peaks ENCSR388QZF ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB857ZMJ DNA False 2016-09-27 ENCODE 1, 2 ENCFF656WXD 11487429 ENCODE Processing Pipeline 280751a29ebe28c8b1c3d4a4b0d53bfc https://www.encodeproject.org/files/ENCFF852NAG/@@download/ENCFF852NAG.bigBed hg19 released low read depth ENCFF522VPA bigBed narrowPeak peaks ENCSR388QZF ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB857ZMJ DNA False 2016-09-27 ENCODE 2 ENCFF109VMO 11660550 ENCODE Processing Pipeline 3a38045a641af7f513681f4d851f1736 https://www.encodeproject.org/files/ENCFF522VPA/@@download/ENCFF522VPA.bigBed hg19 released low read depth ENCFF692COR bigBed narrowPeak optimal idr thresholded peaks ENCSR388QZF ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB857ZMJ DNA False 2016-09-27 ENCODE 1, 2 ENCFF248IWJ 1619061 ENCODE Processing Pipeline f763df8aa4e0dc1b3ce4b1b206cdc2cb https://www.encodeproject.org/files/ENCFF692COR/@@download/ENCFF692COR.bigBed hg19 released low read depth ENCFF248IWJ bed narrowPeak optimal idr thresholded peaks ENCSR388QZF ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB857ZMJ DNA False 2016-09-27 ENCODE 1, 2 ENCFF001TDO, ENCFF109VMO, ENCFF157PBO, ENCFF656WXD 771608 ENCODE Processing Pipeline 5483386eae2504c8c9ca1e71d470c6a3 https://www.encodeproject.org/files/ENCFF248IWJ/@@download/ENCFF248IWJ.bed.gz hg19 released low read depth ENCFF536MUP bam unfiltered alignments ENCSR388QZF ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB857ZMJ DNA False 2016-09-27 ENCODE 1 100 ENCFF400NVU, ENCFF643CGH, ENCFF920SBM 4018045031 ENCODE Processing Pipeline ab6c2d993dc9ee7d001eb9aa6ce9ed7e https://www.encodeproject.org/files/ENCFF536MUP/@@download/ENCFF536MUP.bam GRCh38 released low read depth ENCFF334RNJ bam unfiltered alignments ENCSR388QZF ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB857ZMJ DNA False 2016-09-27 ENCODE 2 100 ENCFF643CGH, ENCFF698ICA, ENCFF839LPL 5022146731 ENCODE Processing Pipeline 2609e79d9688035200bd0e60053882b5 https://www.encodeproject.org/files/ENCFF334RNJ/@@download/ENCFF334RNJ.bam GRCh38 released low read depth ENCFF438GBD bam alignments ENCSR388QZF ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB857ZMJ DNA False 2016-09-27 ENCODE 1 100 ENCFF400NVU, ENCFF643CGH, ENCFF920SBM 3498115872 ENCODE Processing Pipeline b6415a44ce28929e9aa00764490fc7a5 https://www.encodeproject.org/files/ENCFF438GBD/@@download/ENCFF438GBD.bam GRCh38 released low read depth ENCFF601CVJ bam alignments ENCSR388QZF ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB857ZMJ DNA False 2016-09-27 ENCODE 2 100 ENCFF643CGH, ENCFF698ICA, ENCFF839LPL 4297172506 ENCODE Processing Pipeline 2f8e42b8ff22fe36d4517bc4bc8f8c71 https://www.encodeproject.org/files/ENCFF601CVJ/@@download/ENCFF601CVJ.bam GRCh38 released low read depth ENCFF471XED bigWig signal p-value ENCSR388QZF ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB857ZMJ DNA False 2016-09-27 ENCODE 1 ENCFF438GBD, ENCFF910IKB 989705367 ENCODE Processing Pipeline 96835f2da93f2ed994c29b57c9a96d5a https://www.encodeproject.org/files/ENCFF471XED/@@download/ENCFF471XED.bigWig GRCh38 released low read depth ENCFF855XHJ bigWig signal p-value ENCSR388QZF ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB857ZMJ DNA False 2016-09-27 ENCODE 2 ENCFF227IZS, ENCFF601CVJ 998996074 ENCODE Processing Pipeline 6d8ac8393969d485a4a8cfb6b11155dd https://www.encodeproject.org/files/ENCFF855XHJ/@@download/ENCFF855XHJ.bigWig GRCh38 released low read depth ENCFF178AKL bigWig signal p-value ENCSR388QZF ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB857ZMJ DNA False 2016-09-27 ENCODE 1, 2 ENCFF227IZS, ENCFF438GBD, ENCFF601CVJ, ENCFF910IKB 1632787882 ENCODE Processing Pipeline aded0cf482d6cb5900b97025b8f0fdc1 https://www.encodeproject.org/files/ENCFF178AKL/@@download/ENCFF178AKL.bigWig GRCh38 released low read depth ENCFF721DBO bigWig fold change over control ENCSR388QZF ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB857ZMJ DNA False 2016-09-27 ENCODE 1 ENCFF438GBD, ENCFF910IKB 994932022 ENCODE Processing Pipeline abdea0c19bc5669929c3b270ff6395bd https://www.encodeproject.org/files/ENCFF721DBO/@@download/ENCFF721DBO.bigWig GRCh38 released low read depth ENCFF662UVZ bigWig fold change over control ENCSR388QZF ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB857ZMJ DNA False 2016-09-27 ENCODE 2 ENCFF227IZS, ENCFF601CVJ 1033022894 ENCODE Processing Pipeline a3fecc21ac5d30049aa7c8fd94bf86f8 https://www.encodeproject.org/files/ENCFF662UVZ/@@download/ENCFF662UVZ.bigWig GRCh38 released low read depth ENCFF321FZQ bigWig fold change over control ENCSR388QZF ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB857ZMJ DNA False 2016-09-27 ENCODE 1, 2 ENCFF227IZS, ENCFF438GBD, ENCFF601CVJ, ENCFF910IKB 1905247328 ENCODE Processing Pipeline bad0d245ab32c2cc1285e525eeaee8c9 https://www.encodeproject.org/files/ENCFF321FZQ/@@download/ENCFF321FZQ.bigWig GRCh38 released low read depth ENCFF547VDF bed narrowPeak peaks ENCSR388QZF ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB857ZMJ DNA False 2016-09-27 ENCODE 1 ENCFF438GBD, ENCFF910IKB 7104038 ENCODE Processing Pipeline d43a3f6ae0d1a9715fb9d72539877e67 https://www.encodeproject.org/files/ENCFF547VDF/@@download/ENCFF547VDF.bed.gz GRCh38 released low read depth ENCFF714KCD bed narrowPeak peaks ENCSR388QZF ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB857ZMJ DNA False 2016-09-27 ENCODE 2 ENCFF227IZS, ENCFF601CVJ 7122462 ENCODE Processing Pipeline 75f79b02ff8028b92a6793ceaa149be1 https://www.encodeproject.org/files/ENCFF714KCD/@@download/ENCFF714KCD.bed.gz GRCh38 released low read depth ENCFF516BJP bed narrowPeak peaks ENCSR388QZF ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB857ZMJ DNA False 2016-09-27 ENCODE 1, 2 ENCFF227IZS, ENCFF438GBD, ENCFF601CVJ, ENCFF910IKB 7200636 ENCODE Processing Pipeline 58c7e607e48ad9107d75d25fb9fd3249 https://www.encodeproject.org/files/ENCFF516BJP/@@download/ENCFF516BJP.bed.gz GRCh38 released low read depth ENCFF589FFR bigBed narrowPeak peaks ENCSR388QZF ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB857ZMJ DNA False 2016-09-27 ENCODE 1 ENCFF547VDF 11930747 ENCODE Processing Pipeline a5123f5018280d97c4ad96b1d2ad924d https://www.encodeproject.org/files/ENCFF589FFR/@@download/ENCFF589FFR.bigBed GRCh38 released low read depth ENCFF748IRQ bigBed narrowPeak peaks ENCSR388QZF ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB857ZMJ DNA False 2016-09-27 ENCODE 2 ENCFF714KCD 11515730 ENCODE Processing Pipeline 2f96f91d43bf61014c629b0817d0de6a https://www.encodeproject.org/files/ENCFF748IRQ/@@download/ENCFF748IRQ.bigBed GRCh38 released low read depth ENCFF012ZCC bigBed narrowPeak peaks ENCSR388QZF ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB857ZMJ DNA False 2016-09-27 ENCODE 1, 2 ENCFF516BJP 11382864 ENCODE Processing Pipeline 1a82f00a35399537614636d0322f1bf2 https://www.encodeproject.org/files/ENCFF012ZCC/@@download/ENCFF012ZCC.bigBed GRCh38 released low read depth ENCFF285MBX bed narrowPeak optimal idr thresholded peaks ENCSR388QZF ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB857ZMJ DNA False 2016-09-27 ENCODE 1, 2 ENCFF419RSJ, ENCFF516BJP, ENCFF547VDF, ENCFF714KCD 745128 ENCODE Processing Pipeline b66ab75e232ac34877a053faf9db5195 https://www.encodeproject.org/files/ENCFF285MBX/@@download/ENCFF285MBX.bed.gz GRCh38 released low read depth ENCFF130WVT bigBed narrowPeak optimal idr thresholded peaks ENCSR388QZF ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB857ZMJ DNA False 2016-09-27 ENCODE 1, 2 ENCFF285MBX 1578419 ENCODE Processing Pipeline 7624d1f26fb3f0a86a30282ce8227a18 https://www.encodeproject.org/files/ENCFF130WVT/@@download/ENCFF130WVT.bigBed GRCh38 released low read depth ENCFF000BZG bam alignments ENCSR000AQG ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC2-human ENCAB000AHI DNA see document see document False 2012-03-06 ENCODE 1 1 1147790423 Bradley Bernstein, Broad 94a9db41c02a9dad39b3fc6104b78658 https://www.encodeproject.org/files/ENCFF000BZG/@@download/ENCFF000BZG.bam hg19 archived borderline replicate concordance, inconsistent platforms, control low read depth, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length missing derived_from ENCFF000BZH bam alignments ENCSR000AQG ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC2-human ENCAB000AHI DNA see document see document False 2012-03-06 ENCODE 2 1 803402462 Bradley Bernstein, Broad 150a73e331d59563816984922be767b2 https://www.encodeproject.org/files/ENCFF000BZH/@@download/ENCFF000BZH.bam hg19 archived borderline replicate concordance, inconsistent platforms, control low read depth, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length missing derived_from ENCFF000BZI bigBed broadPeak peaks ENCSR000AQG ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC2-human ENCAB000AHI DNA see document see document False 2012-03-06 ENCODE ENCFF001SZQ 4789350 Bradley Bernstein, Broad 6fcb3c8bda6a11180edee6f263f7b96b https://www.encodeproject.org/files/ENCFF000BZI/@@download/ENCFF000BZI.bigBed hg19 archived borderline replicate concordance, inconsistent platforms, control low read depth, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length ENCFF000BZL bigWig signal ENCSR000AQG ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC2-human ENCAB000AHI DNA see document see document False 2012-03-06 ENCODE 441384820 Bradley Bernstein, Broad 188b815ae7636ba567908fa251c84b5a https://www.encodeproject.org/files/ENCFF000BZL/@@download/ENCFF000BZL.bigWig hg19 archived borderline replicate concordance, inconsistent platforms, control low read depth, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length missing derived_from ENCFF001SZQ bed broadPeak peaks ENCSR000AQG ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC2-human ENCAB000AHI DNA see document see document False 2012-03-06 ENCODE 3260619 Bradley Bernstein, Broad 7cbe6c1860923d4839608fca47c08fe3 https://www.encodeproject.org/files/ENCFF001SZQ/@@download/ENCFF001SZQ.bed.gz hg19 archived borderline replicate concordance, inconsistent platforms, control low read depth, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length missing derived_from ENCFF002CEO bed narrowPeak optimal idr thresholded peaks ENCSR000AQG ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC2-human ENCAB000AHI DNA see document see document False 2012-03-06 ENCODE 121425 ENCODE Consortium Analysis Working Group 636ef8b5c6f6f03df33fbf7456260d38 https://www.encodeproject.org/files/ENCFF002CEO/@@download/ENCFF002CEO.bed.gz hg19 archived borderline replicate concordance, inconsistent platforms, control low read depth, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length missing derived_from ENCFF010SXM bigBed narrowPeak optimal idr thresholded peaks ENCSR000AQG ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC2-human ENCAB000AHI DNA see document see document False 2012-03-06 ENCODE ENCFF002CEO 293752 ENCODE Consortium 041872b566e7375ed41392dbf47d04e1 https://www.encodeproject.org/files/ENCFF010SXM/@@download/ENCFF010SXM.bigBed hg19 archived borderline replicate concordance, inconsistent platforms, control low read depth, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length ENCFF315OYW fastq reads ENCSR000AQG ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC2-human ENCAB000AHI DNA see document see document False 2012-03-06 ENCODE 1 1 36 single-ended 1234252642 Bradley Bernstein, Broad 30ade1732546961e3a4521805c81e00e https://www.encodeproject.org/files/ENCFF315OYW/@@download/ENCFF315OYW.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000BWK/ released borderline replicate concordance, inconsistent platforms, control low read depth, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length ENCFF583ZBF fastq reads ENCSR000AQG ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC2-human ENCAB000AHI DNA see document see document False 2012-03-06 ENCODE 2 1 36 single-ended 1258303345 Bradley Bernstein, Broad 9042470bd9f5e29c8e294ad76c758e23 https://www.encodeproject.org/files/ENCFF583ZBF/@@download/ENCFF583ZBF.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF283HQV/, /files/ENCFF994FIB/ released borderline replicate concordance, inconsistent platforms, control low read depth, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length ENCFF859DKS bam unfiltered alignments ENCSR000AQG ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC2-human ENCAB000AHI DNA see document see document False 2012-03-06 ENCODE 2 36 ENCFF583ZBF, ENCFF643CGH 1539260970 ENCODE Processing Pipeline 9fbc0537d53b62b7eba118449196421d https://www.encodeproject.org/files/ENCFF859DKS/@@download/ENCFF859DKS.bam GRCh38 released borderline replicate concordance, inconsistent platforms, control low read depth, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length ENCFF118VIO bam alignments ENCSR000AQG ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC2-human ENCAB000AHI DNA see document see document False 2012-03-06 ENCODE 2 36 ENCFF583ZBF, ENCFF807MUK 574117427 ENCODE Processing Pipeline 3a9b0b04c76516144f1a3c422e20d454 https://www.encodeproject.org/files/ENCFF118VIO/@@download/ENCFF118VIO.bam hg19 released borderline replicate concordance, inconsistent platforms, control low read depth, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length ENCFF979MVK bam alignments ENCSR000AQG ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC2-human ENCAB000AHI DNA see document see document False 2012-03-06 ENCODE 1 36 ENCFF315OYW, ENCFF807MUK 521117816 ENCODE Processing Pipeline 6e61a27da24ef3c8d229370974b8b465 https://www.encodeproject.org/files/ENCFF979MVK/@@download/ENCFF979MVK.bam hg19 released borderline replicate concordance, inconsistent platforms, control low read depth, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length ENCFF388BJH bam unfiltered alignments ENCSR000AQG ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC2-human ENCAB000AHI DNA see document see document False 2012-03-06 ENCODE 1 36 ENCFF315OYW, ENCFF807MUK 1583414622 ENCODE Processing Pipeline 3b69cffd145a81c6e432722c0b0ed20a https://www.encodeproject.org/files/ENCFF388BJH/@@download/ENCFF388BJH.bam hg19 released borderline replicate concordance, inconsistent platforms, control low read depth, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length ENCFF480QNB bam unfiltered alignments ENCSR000AQG ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC2-human ENCAB000AHI DNA see document see document False 2012-03-06 ENCODE 2 36 ENCFF583ZBF, ENCFF807MUK 1533988936 ENCODE Processing Pipeline 3dc65ef935030d56524d61b3412ae8e1 https://www.encodeproject.org/files/ENCFF480QNB/@@download/ENCFF480QNB.bam hg19 released borderline replicate concordance, inconsistent platforms, control low read depth, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length ENCFF456VOS bam alignments ENCSR000AQG ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC2-human ENCAB000AHI DNA see document see document False 2012-03-06 ENCODE 2 36 ENCFF583ZBF, ENCFF643CGH 573752081 ENCODE Processing Pipeline d7b4ddc9e2347d5e6103d62057696163 https://www.encodeproject.org/files/ENCFF456VOS/@@download/ENCFF456VOS.bam GRCh38 released borderline replicate concordance, inconsistent platforms, control low read depth, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length ENCFF205EFG bam unfiltered alignments ENCSR000AQG ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC2-human ENCAB000AHI DNA see document see document False 2012-03-06 ENCODE 1 36 ENCFF315OYW, ENCFF643CGH 1590548420 ENCODE Processing Pipeline 50062d4f66ba275216a1d7f587d46fc2 https://www.encodeproject.org/files/ENCFF205EFG/@@download/ENCFF205EFG.bam GRCh38 released borderline replicate concordance, inconsistent platforms, control low read depth, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length ENCFF610YXS bam alignments ENCSR000AQG ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC2-human ENCAB000AHI DNA see document see document False 2012-03-06 ENCODE 1 36 ENCFF315OYW, ENCFF643CGH 520684007 ENCODE Processing Pipeline b0faa0dcce92e657108cc7e3e20ee0ed https://www.encodeproject.org/files/ENCFF610YXS/@@download/ENCFF610YXS.bam GRCh38 released borderline replicate concordance, inconsistent platforms, control low read depth, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length ENCFF964BMW bigWig signal p-value ENCSR000AQG ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC2-human ENCAB000AHI DNA see document see document False 2012-03-06 ENCODE 1 ENCFF392XRJ, ENCFF610YXS 336955739 ENCODE Processing Pipeline 2b380c867e7e885a2f08e6cc58610dbc https://www.encodeproject.org/files/ENCFF964BMW/@@download/ENCFF964BMW.bigWig GRCh38 released borderline replicate concordance, inconsistent platforms, control low read depth, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length ENCFF772KRP bigWig signal p-value ENCSR000AQG ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC2-human ENCAB000AHI DNA see document see document False 2012-03-06 ENCODE 1 ENCFF574XYY, ENCFF979MVK 387945221 ENCODE Processing Pipeline 6f1fa82ee5265d4d45b3c6b7e1e7b205 https://www.encodeproject.org/files/ENCFF772KRP/@@download/ENCFF772KRP.bigWig hg19 released borderline replicate concordance, inconsistent platforms, control low read depth, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length ENCFF652HWU bigWig fold change over control ENCSR000AQG ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC2-human ENCAB000AHI DNA see document see document False 2012-03-06 ENCODE 1 ENCFF392XRJ, ENCFF610YXS 230431305 ENCODE Processing Pipeline 11bb2279acdcc4205058beacdcdd7e95 https://www.encodeproject.org/files/ENCFF652HWU/@@download/ENCFF652HWU.bigWig GRCh38 released borderline replicate concordance, inconsistent platforms, control low read depth, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length ENCFF480JCX bigWig fold change over control ENCSR000AQG ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC2-human ENCAB000AHI DNA see document see document False 2012-03-06 ENCODE 1 ENCFF574XYY, ENCFF979MVK 232153580 ENCODE Processing Pipeline a0e33a1e62b621efc911d9c976896b55 https://www.encodeproject.org/files/ENCFF480JCX/@@download/ENCFF480JCX.bigWig hg19 released borderline replicate concordance, inconsistent platforms, control low read depth, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length ENCFF918YKH bigWig signal p-value ENCSR000AQG ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC2-human ENCAB000AHI DNA see document see document False 2012-03-06 ENCODE 2 ENCFF118VIO, ENCFF245PJA 304598455 ENCODE Processing Pipeline 1fc15696fb96b33e785516fa3b934409 https://www.encodeproject.org/files/ENCFF918YKH/@@download/ENCFF918YKH.bigWig hg19 released borderline replicate concordance, inconsistent platforms, control low read depth, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length ENCFF417IVC bigWig signal p-value ENCSR000AQG ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC2-human ENCAB000AHI DNA see document see document False 2012-03-06 ENCODE 2 ENCFF456VOS, ENCFF829HZY 304329175 ENCODE Processing Pipeline b4f29bd79bcc59c1d91c1b04b9a5bdb9 https://www.encodeproject.org/files/ENCFF417IVC/@@download/ENCFF417IVC.bigWig GRCh38 released borderline replicate concordance, inconsistent platforms, control low read depth, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length ENCFF950DNQ bigWig signal p-value ENCSR000AQG ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC2-human ENCAB000AHI DNA see document see document False 2012-03-06 ENCODE 1, 2 ENCFF118VIO, ENCFF245PJA, ENCFF574XYY, ENCFF979MVK 677549613 ENCODE Processing Pipeline 5794fdcf0b16759880e796e98cf00f0a https://www.encodeproject.org/files/ENCFF950DNQ/@@download/ENCFF950DNQ.bigWig hg19 released borderline replicate concordance, inconsistent platforms, control low read depth, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length ENCFF086GIP bigWig signal p-value ENCSR000AQG ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC2-human ENCAB000AHI DNA see document see document False 2012-03-06 ENCODE 1, 2 ENCFF392XRJ, ENCFF456VOS, ENCFF610YXS, ENCFF829HZY 624480352 ENCODE Processing Pipeline 9a6dca00e07fb3914f590733768b4c3a https://www.encodeproject.org/files/ENCFF086GIP/@@download/ENCFF086GIP.bigWig GRCh38 released borderline replicate concordance, inconsistent platforms, control low read depth, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length ENCFF485YWM bigBed narrowPeak peaks ENCSR000AQG ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC2-human ENCAB000AHI DNA see document see document False 2012-03-06 ENCODE 2 ENCFF930KIS 10097851 ENCODE Processing Pipeline 40ab861e8f71b06c5490cecde9fda133 https://www.encodeproject.org/files/ENCFF485YWM/@@download/ENCFF485YWM.bigBed hg19 released borderline replicate concordance, inconsistent platforms, control low read depth, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length ENCFF974TDS bigBed narrowPeak peaks ENCSR000AQG ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC2-human ENCAB000AHI DNA see document see document False 2012-03-06 ENCODE 1, 2 ENCFF680CDC 13173152 ENCODE Processing Pipeline 41d54a75d6dc1caac3089b2f5d92a880 https://www.encodeproject.org/files/ENCFF974TDS/@@download/ENCFF974TDS.bigBed hg19 released borderline replicate concordance, inconsistent platforms, control low read depth, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length ENCFF802ARP bigBed narrowPeak conservative idr thresholded peaks ENCSR000AQG ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC2-human ENCAB000AHI DNA see document see document False 2012-03-06 ENCODE 1, 2 ENCFF713HRG 179715 ENCODE Processing Pipeline c79edfe472f4e24ce8e2a47a1b006b20 https://www.encodeproject.org/files/ENCFF802ARP/@@download/ENCFF802ARP.bigBed hg19 released borderline replicate concordance, inconsistent platforms, control low read depth, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length ENCFF363GSV bed narrowPeak optimal idr thresholded peaks ENCSR000AQG ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC2-human ENCAB000AHI DNA see document see document False 2012-03-06 ENCODE 1, 2 ENCFF325JSZ, ENCFF419RSJ, ENCFF632FBG, ENCFF951IMJ 100086 ENCODE Processing Pipeline 67405073f47d435e55cd4f45c411b2d2 https://www.encodeproject.org/files/ENCFF363GSV/@@download/ENCFF363GSV.bed.gz GRCh38 released borderline replicate concordance, inconsistent platforms, control low read depth, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length ENCFF133DXG bigBed narrowPeak optimal idr thresholded peaks ENCSR000AQG ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC2-human ENCAB000AHI DNA see document see document False 2012-03-06 ENCODE 1, 2 ENCFF363GSV 231031 ENCODE Processing Pipeline a0a91cd44bc36def95caba8bc36a6af8 https://www.encodeproject.org/files/ENCFF133DXG/@@download/ENCFF133DXG.bigBed GRCh38 released borderline replicate concordance, inconsistent platforms, control low read depth, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length ENCFF095NWO bigBed narrowPeak peaks ENCSR000AQG ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC2-human ENCAB000AHI DNA see document see document False 2012-03-06 ENCODE 1 ENCFF233XEO 10231085 ENCODE Processing Pipeline 38d6b9be1e99072375047af1d72cbc14 https://www.encodeproject.org/files/ENCFF095NWO/@@download/ENCFF095NWO.bigBed hg19 released borderline replicate concordance, inconsistent platforms, control low read depth, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length ENCFF178YJX bigWig fold change over control ENCSR000AQG ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC2-human ENCAB000AHI DNA see document see document False 2012-03-06 ENCODE 2 ENCFF118VIO, ENCFF245PJA 241439233 ENCODE Processing Pipeline 3102ed93d9920adaf5cd48bb4bf68f04 https://www.encodeproject.org/files/ENCFF178YJX/@@download/ENCFF178YJX.bigWig hg19 released borderline replicate concordance, inconsistent platforms, control low read depth, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length ENCFF532SIS bigWig fold change over control ENCSR000AQG ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC2-human ENCAB000AHI DNA see document see document False 2012-03-06 ENCODE 1, 2 ENCFF118VIO, ENCFF245PJA, ENCFF574XYY, ENCFF979MVK 518004071 ENCODE Processing Pipeline 5e6e92aef31d1d8c796d4cd080c734a0 https://www.encodeproject.org/files/ENCFF532SIS/@@download/ENCFF532SIS.bigWig hg19 released borderline replicate concordance, inconsistent platforms, control low read depth, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length ENCFF325JSZ bed narrowPeak peaks ENCSR000AQG ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC2-human ENCAB000AHI DNA see document see document False 2012-03-06 ENCODE 1 ENCFF392XRJ, ENCFF610YXS 4350637 ENCODE Processing Pipeline ff042d67bdb8fcafefa7e81bc4fd7125 https://www.encodeproject.org/files/ENCFF325JSZ/@@download/ENCFF325JSZ.bed.gz GRCh38 released borderline replicate concordance, inconsistent platforms, control low read depth, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length ENCFF680CDC bed narrowPeak peaks ENCSR000AQG ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC2-human ENCAB000AHI DNA see document see document False 2012-03-06 ENCODE 1, 2 ENCFF118VIO, ENCFF245PJA, ENCFF574XYY, ENCFF979MVK 5850772 ENCODE Processing Pipeline a32dfdd5ef16afbcaeeebbaccb10f1f6 https://www.encodeproject.org/files/ENCFF680CDC/@@download/ENCFF680CDC.bed.gz hg19 released borderline replicate concordance, inconsistent platforms, control low read depth, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length ENCFF448HKE bigBed narrowPeak peaks ENCSR000AQG ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC2-human ENCAB000AHI DNA see document see document False 2012-03-06 ENCODE 1 ENCFF325JSZ 10215076 ENCODE Processing Pipeline 73912bf076a6a2cce07888d4fa61f134 https://www.encodeproject.org/files/ENCFF448HKE/@@download/ENCFF448HKE.bigBed GRCh38 released borderline replicate concordance, inconsistent platforms, control low read depth, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length ENCFF713HRG bed narrowPeak conservative idr thresholded peaks ENCSR000AQG ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC2-human ENCAB000AHI DNA see document see document False 2012-03-06 ENCODE 1, 2 ENCFF001TDO, ENCFF233XEO, ENCFF680CDC, ENCFF930KIS 68082 ENCODE Processing Pipeline 0477a7db4edd8a8b05d4b3754310d83a https://www.encodeproject.org/files/ENCFF713HRG/@@download/ENCFF713HRG.bed.gz hg19 released borderline replicate concordance, inconsistent platforms, control low read depth, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length ENCFF657VJX bed narrowPeak optimal idr thresholded peaks ENCSR000AQG ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC2-human ENCAB000AHI DNA see document see document False 2012-03-06 ENCODE 1, 2 ENCFF001TDO, ENCFF233XEO, ENCFF680CDC, ENCFF930KIS 93415 ENCODE Processing Pipeline e7464d52ba1f458c1b5e6a0c4a1cfecd https://www.encodeproject.org/files/ENCFF657VJX/@@download/ENCFF657VJX.bed.gz hg19 released borderline replicate concordance, inconsistent platforms, control low read depth, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length ENCFF716YLY bigWig fold change over control ENCSR000AQG ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC2-human ENCAB000AHI DNA see document see document False 2012-03-06 ENCODE 2 ENCFF456VOS, ENCFF829HZY 241181100 ENCODE Processing Pipeline a12308fcf162238e0002b2f2e36e6ed8 https://www.encodeproject.org/files/ENCFF716YLY/@@download/ENCFF716YLY.bigWig GRCh38 released borderline replicate concordance, inconsistent platforms, control low read depth, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length ENCFF337NZT bigWig fold change over control ENCSR000AQG ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC2-human ENCAB000AHI DNA see document see document False 2012-03-06 ENCODE 1, 2 ENCFF392XRJ, ENCFF456VOS, ENCFF610YXS, ENCFF829HZY 519692941 ENCODE Processing Pipeline bbf5de150dbed91b10977b0d3e5516da https://www.encodeproject.org/files/ENCFF337NZT/@@download/ENCFF337NZT.bigWig GRCh38 released borderline replicate concordance, inconsistent platforms, control low read depth, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length ENCFF951IMJ bed narrowPeak peaks ENCSR000AQG ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC2-human ENCAB000AHI DNA see document see document False 2012-03-06 ENCODE 2 ENCFF456VOS, ENCFF829HZY 4119489 ENCODE Processing Pipeline 28289ab9ff8ea1fac55a2ffa34274695 https://www.encodeproject.org/files/ENCFF951IMJ/@@download/ENCFF951IMJ.bed.gz GRCh38 released borderline replicate concordance, inconsistent platforms, control low read depth, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length ENCFF124TGZ bigBed narrowPeak conservative idr thresholded peaks ENCSR000AQG ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC2-human ENCAB000AHI DNA see document see document False 2012-03-06 ENCODE 1, 2 ENCFF660FBQ 182640 ENCODE Processing Pipeline 832a9c3967a9a5d401667e17b68b6351 https://www.encodeproject.org/files/ENCFF124TGZ/@@download/ENCFF124TGZ.bigBed GRCh38 released borderline replicate concordance, inconsistent platforms, control low read depth, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length ENCFF233XEO bed narrowPeak peaks ENCSR000AQG ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC2-human ENCAB000AHI DNA see document see document False 2012-03-06 ENCODE 1 ENCFF574XYY, ENCFF979MVK 4369803 ENCODE Processing Pipeline c93be7987719bacc0e44acae6a84097b https://www.encodeproject.org/files/ENCFF233XEO/@@download/ENCFF233XEO.bed.gz hg19 released borderline replicate concordance, inconsistent platforms, control low read depth, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length ENCFF930KIS bed narrowPeak peaks ENCSR000AQG ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC2-human ENCAB000AHI DNA see document see document False 2012-03-06 ENCODE 2 ENCFF118VIO, ENCFF245PJA 4151818 ENCODE Processing Pipeline fe651af8616d0ff1d7b529fa8ae545d9 https://www.encodeproject.org/files/ENCFF930KIS/@@download/ENCFF930KIS.bed.gz hg19 released borderline replicate concordance, inconsistent platforms, control low read depth, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length ENCFF501SEG bigBed narrowPeak peaks ENCSR000AQG ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC2-human ENCAB000AHI DNA see document see document False 2012-03-06 ENCODE 1, 2 ENCFF632FBG 13177729 ENCODE Processing Pipeline 1d3c1fa126c582020ff587c6de5117d3 https://www.encodeproject.org/files/ENCFF501SEG/@@download/ENCFF501SEG.bigBed GRCh38 released borderline replicate concordance, inconsistent platforms, control low read depth, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length ENCFF660FBQ bed narrowPeak conservative idr thresholded peaks ENCSR000AQG ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC2-human ENCAB000AHI DNA see document see document False 2012-03-06 ENCODE 1, 2 ENCFF325JSZ, ENCFF419RSJ, ENCFF632FBG, ENCFF951IMJ 69329 ENCODE Processing Pipeline 05eed361f56bb6ec98026a3f57b05822 https://www.encodeproject.org/files/ENCFF660FBQ/@@download/ENCFF660FBQ.bed.gz GRCh38 released borderline replicate concordance, inconsistent platforms, control low read depth, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length ENCFF384MAK bigBed narrowPeak optimal idr thresholded peaks ENCSR000AQG ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC2-human ENCAB000AHI DNA see document see document False 2012-03-06 ENCODE 1, 2 ENCFF657VJX 220489 ENCODE Processing Pipeline 21b73b3c9518e9bd1721c05b62b43507 https://www.encodeproject.org/files/ENCFF384MAK/@@download/ENCFF384MAK.bigBed hg19 released borderline replicate concordance, inconsistent platforms, control low read depth, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length ENCFF632FBG bed narrowPeak peaks ENCSR000AQG ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC2-human ENCAB000AHI DNA see document see document False 2012-03-06 ENCODE 1, 2 ENCFF392XRJ, ENCFF456VOS, ENCFF610YXS, ENCFF829HZY 5844670 ENCODE Processing Pipeline 1e42441c63dd7b2f207b59a107627b2a https://www.encodeproject.org/files/ENCFF632FBG/@@download/ENCFF632FBG.bed.gz GRCh38 released borderline replicate concordance, inconsistent platforms, control low read depth, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length ENCFF312HSR bigBed narrowPeak peaks ENCSR000AQG ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC2-human ENCAB000AHI DNA see document see document False 2012-03-06 ENCODE 2 ENCFF951IMJ 10081297 ENCODE Processing Pipeline 48b5b54d001454a8d36bcb66c0aa24dd https://www.encodeproject.org/files/ENCFF312HSR/@@download/ENCFF312HSR.bigBed GRCh38 released borderline replicate concordance, inconsistent platforms, control low read depth, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length ENCFF064QDV bam unfiltered alignments ENCSR410DWC ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-PYGO2-human ENCAB728YTO DNA False 2016-01-14 ENCODE 2 100 ENCFF315YLZ, ENCFF649JEY, ENCFF807MUK 6304596924 ENCODE Processing Pipeline 94c9338d55f15e24b47f5b218dd15d6f https://www.encodeproject.org/files/ENCFF064QDV/@@download/ENCFF064QDV.bam hg19 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF274ANJ bam unfiltered alignments ENCSR410DWC ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-PYGO2-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1 100 ENCFF150HAD, ENCFF768KWX, ENCFF807MUK 5411375170 ENCODE Processing Pipeline 190f13f8908155546553af4443b72673 https://www.encodeproject.org/files/ENCFF274ANJ/@@download/ENCFF274ANJ.bam hg19 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF649JEY fastq reads ENCSR410DWC ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-PYGO2-human ENCAB728YTO DNA False 2016-01-14 ENCODE 2 1 100 paired-ended 2 ENCFF315YLZ 2961256919 Michael Snyder, Stanford b283bd5e16a084d062b0df62d7a8f89a SRA:SRR5111551 https://www.encodeproject.org/files/ENCFF649JEY/@@download/ENCFF649JEY.fastq.gz Illumina HiSeq 2000 /files/ENCFF422LHF/ released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF315YLZ fastq reads ENCSR410DWC ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-PYGO2-human ENCAB728YTO DNA False 2016-01-14 ENCODE 2 1 100 paired-ended 1 ENCFF649JEY 2986170556 Michael Snyder, Stanford 8b09014cbca8db7c73b3dceefb72ad7e SRA:SRR5111551 https://www.encodeproject.org/files/ENCFF315YLZ/@@download/ENCFF315YLZ.fastq.gz Illumina HiSeq 2000 /files/ENCFF427TUR/ released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF768KWX fastq reads ENCSR410DWC ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-PYGO2-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1 1 100 paired-ended 2 ENCFF150HAD 2555218979 Michael Snyder, Stanford 6580b1cf0e62c791059f18cad8785c96 SRA:SRR5111550 https://www.encodeproject.org/files/ENCFF768KWX/@@download/ENCFF768KWX.fastq.gz Illumina HiSeq 2000 /files/ENCFF422LHF/ released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF150HAD fastq reads ENCSR410DWC ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-PYGO2-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1 1 100 paired-ended 1 ENCFF768KWX 2426677381 Michael Snyder, Stanford 580a05c585b6541ed654fc552283b598 SRA:SRR5111550 https://www.encodeproject.org/files/ENCFF150HAD/@@download/ENCFF150HAD.fastq.gz Illumina HiSeq 2000 /files/ENCFF427TUR/ released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF137WND bam alignments ENCSR410DWC ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-PYGO2-human ENCAB728YTO DNA False 2016-01-14 ENCODE 2 100 ENCFF315YLZ, ENCFF649JEY, ENCFF807MUK 4277753557 ENCODE Processing Pipeline dd860b59a0b5d4e2ddf800c445cbed88 https://www.encodeproject.org/files/ENCFF137WND/@@download/ENCFF137WND.bam hg19 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF180VYU bam alignments ENCSR410DWC ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-PYGO2-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1 100 ENCFF150HAD, ENCFF768KWX, ENCFF807MUK 4144058808 ENCODE Processing Pipeline c99c8a6ca1afbed1add1239cb5a09c0b https://www.encodeproject.org/files/ENCFF180VYU/@@download/ENCFF180VYU.bam hg19 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF266WWG bigWig signal p-value ENCSR410DWC ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-PYGO2-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1 ENCFF004VBD, ENCFF180VYU 973820071 ENCODE Processing Pipeline 1eeb659e397d335a502eac18761f6c84 https://www.encodeproject.org/files/ENCFF266WWG/@@download/ENCFF266WWG.bigWig hg19 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF196WCU bigWig signal p-value ENCSR410DWC ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-PYGO2-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF004VBD, ENCFF137WND, ENCFF180VYU 950942291 ENCODE Processing Pipeline d308bbb72ceb46fcc0a3eba9c1aea8a5 https://www.encodeproject.org/files/ENCFF196WCU/@@download/ENCFF196WCU.bigWig hg19 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF688IKM bigWig fold change over control ENCSR410DWC ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-PYGO2-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1 ENCFF004VBD, ENCFF180VYU 946744939 ENCODE Processing Pipeline 60bdb24c63aa2eb9a5ea92e4e068a97c https://www.encodeproject.org/files/ENCFF688IKM/@@download/ENCFF688IKM.bigWig hg19 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF056OBU bigWig fold change over control ENCSR410DWC ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-PYGO2-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF004VBD, ENCFF137WND, ENCFF180VYU 1440614044 ENCODE Processing Pipeline 2d57e9967e058b88da7780cee49061a0 https://www.encodeproject.org/files/ENCFF056OBU/@@download/ENCFF056OBU.bigWig hg19 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF609XXU bam unfiltered alignments ENCSR410DWC ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-PYGO2-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1 100 ENCFF150HAD, ENCFF643CGH, ENCFF768KWX 5417523583 ENCODE Processing Pipeline 9b07e40fd24c10342928ad43b3069aec https://www.encodeproject.org/files/ENCFF609XXU/@@download/ENCFF609XXU.bam GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF279FNY bam unfiltered alignments ENCSR410DWC ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-PYGO2-human ENCAB728YTO DNA False 2016-01-14 ENCODE 2 100 ENCFF315YLZ, ENCFF643CGH, ENCFF649JEY 6312181336 ENCODE Processing Pipeline 03e21f63743bafd44463a2b414d06d60 https://www.encodeproject.org/files/ENCFF279FNY/@@download/ENCFF279FNY.bam GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF434YXL bam alignments ENCSR410DWC ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-PYGO2-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1 100 ENCFF150HAD, ENCFF643CGH, ENCFF768KWX 4148204325 ENCODE Processing Pipeline b06bbe88cf322187b93063b771d5ae39 https://www.encodeproject.org/files/ENCFF434YXL/@@download/ENCFF434YXL.bam GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF649ORS bam alignments ENCSR410DWC ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-PYGO2-human ENCAB728YTO DNA False 2016-01-14 ENCODE 2 100 ENCFF315YLZ, ENCFF643CGH, ENCFF649JEY 4280927008 ENCODE Processing Pipeline c06303bcd9e0c65b9a75b913fc0e76c6 https://www.encodeproject.org/files/ENCFF649ORS/@@download/ENCFF649ORS.bam GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF266LKH bigWig signal p-value ENCSR410DWC ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-PYGO2-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1 ENCFF434YXL, ENCFF868RUE 966795762 ENCODE Processing Pipeline 5eacc2123d4847a6291925128139904e https://www.encodeproject.org/files/ENCFF266LKH/@@download/ENCFF266LKH.bigWig GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF039MYZ bigWig signal p-value ENCSR410DWC ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-PYGO2-human ENCAB728YTO DNA False 2016-01-14 ENCODE 2 ENCFF649ORS, ENCFF868RUE 879868253 ENCODE Processing Pipeline 4e2c8784cb5eebcd18bec45337d146e7 https://www.encodeproject.org/files/ENCFF039MYZ/@@download/ENCFF039MYZ.bigWig GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF931DND bigWig signal p-value ENCSR410DWC ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-PYGO2-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF434YXL, ENCFF649ORS, ENCFF868RUE 943719656 ENCODE Processing Pipeline 5e75f792ac8064f5eebb85262af68c68 https://www.encodeproject.org/files/ENCFF931DND/@@download/ENCFF931DND.bigWig GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF393JHF bigWig fold change over control ENCSR410DWC ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-PYGO2-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1 ENCFF434YXL, ENCFF868RUE 926672629 ENCODE Processing Pipeline 16cd7f03c093ecd44fa60f3ac440cf3d https://www.encodeproject.org/files/ENCFF393JHF/@@download/ENCFF393JHF.bigWig GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF503YUA bigWig fold change over control ENCSR410DWC ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-PYGO2-human ENCAB728YTO DNA False 2016-01-14 ENCODE 2 ENCFF649ORS, ENCFF868RUE 908445949 ENCODE Processing Pipeline 2a662c150e1200026c8a3edc209cc3ec https://www.encodeproject.org/files/ENCFF503YUA/@@download/ENCFF503YUA.bigWig GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF035DWJ bigWig fold change over control ENCSR410DWC ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-PYGO2-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF434YXL, ENCFF649ORS, ENCFF868RUE 1431254028 ENCODE Processing Pipeline 2914340e6925fd217acc3e5520c7363d https://www.encodeproject.org/files/ENCFF035DWJ/@@download/ENCFF035DWJ.bigWig GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF206HKM bed narrowPeak peaks ENCSR410DWC ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-PYGO2-human ENCAB728YTO DNA False 2016-01-14 ENCODE 2 ENCFF649ORS, ENCFF868RUE 5669748 ENCODE Processing Pipeline aefa36ddf6a836ac8d1144605c15aeb9 https://www.encodeproject.org/files/ENCFF206HKM/@@download/ENCFF206HKM.bed.gz GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF915NAK bigBed narrowPeak peaks ENCSR410DWC ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-PYGO2-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1 ENCFF411LUB 11222259 ENCODE Processing Pipeline 3a056e812af2bc68ec0fa35ac3470636 https://www.encodeproject.org/files/ENCFF915NAK/@@download/ENCFF915NAK.bigBed GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF883HIZ bigBed narrowPeak peaks ENCSR410DWC ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-PYGO2-human ENCAB728YTO DNA False 2016-01-14 ENCODE 2 ENCFF206HKM 11356898 ENCODE Processing Pipeline c7b300acf428eaba01be7d06ef9c8a8c https://www.encodeproject.org/files/ENCFF883HIZ/@@download/ENCFF883HIZ.bigBed GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF411LUB bed narrowPeak peaks ENCSR410DWC ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-PYGO2-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1 ENCFF434YXL, ENCFF868RUE 5926498 ENCODE Processing Pipeline 1dea257ccdec471727324e2118eaa620 https://www.encodeproject.org/files/ENCFF411LUB/@@download/ENCFF411LUB.bed.gz GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF622IWJ bigBed narrowPeak peaks ENCSR410DWC ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-PYGO2-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF820LPI 11049506 ENCODE Processing Pipeline 38338218ddc4cbac7521a0759fd4c155 https://www.encodeproject.org/files/ENCFF622IWJ/@@download/ENCFF622IWJ.bigBed GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF820LPI bed narrowPeak peaks ENCSR410DWC ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-PYGO2-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF434YXL, ENCFF649ORS, ENCFF868RUE 6651178 ENCODE Processing Pipeline 9116989795d89e8d0b07a3c1431a7695 https://www.encodeproject.org/files/ENCFF820LPI/@@download/ENCFF820LPI.bed.gz GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF933JEI bigBed narrowPeak conservative idr thresholded peaks ENCSR410DWC ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-PYGO2-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF552LKV 221279 ENCODE Processing Pipeline 9b5ec4da63834cc008c8b8253a1990b7 https://www.encodeproject.org/files/ENCFF933JEI/@@download/ENCFF933JEI.bigBed GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF720FJY bed narrowPeak optimal idr thresholded peaks ENCSR410DWC ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-PYGO2-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF206HKM, ENCFF411LUB, ENCFF419RSJ, ENCFF820LPI 118476 ENCODE Processing Pipeline 3baec9b447c1c7946e00c8d364b23f1b https://www.encodeproject.org/files/ENCFF720FJY/@@download/ENCFF720FJY.bed.gz GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF552LKV bed narrowPeak conservative idr thresholded peaks ENCSR410DWC ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-PYGO2-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF206HKM, ENCFF411LUB, ENCFF419RSJ, ENCFF820LPI 85250 ENCODE Processing Pipeline 4b847859787531dde3d7c1d26933d608 https://www.encodeproject.org/files/ENCFF552LKV/@@download/ENCFF552LKV.bed.gz GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF276XTC bigBed narrowPeak optimal idr thresholded peaks ENCSR410DWC ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-PYGO2-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF720FJY 272084 ENCODE Processing Pipeline caa568ff350456bb76acb80de8f03062 https://www.encodeproject.org/files/ENCFF276XTC/@@download/ENCFF276XTC.bigBed GRCh38 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF907ZPD bigWig signal p-value ENCSR410DWC ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-PYGO2-human ENCAB728YTO DNA False 2016-01-14 ENCODE 2 ENCFF004VBD, ENCFF137WND 936882977 ENCODE Processing Pipeline 0fb25838cd027cb124b737ee8a538e02 https://www.encodeproject.org/files/ENCFF907ZPD/@@download/ENCFF907ZPD.bigWig hg19 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF430YKE bed narrowPeak peaks ENCSR410DWC ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-PYGO2-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1 ENCFF004VBD, ENCFF180VYU 5900331 ENCODE Processing Pipeline 38b2cefa01a1fb8d6ce8bf47823a3bd7 https://www.encodeproject.org/files/ENCFF430YKE/@@download/ENCFF430YKE.bed.gz hg19 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF345NWE bigBed narrowPeak peaks ENCSR410DWC ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-PYGO2-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1 ENCFF430YKE 11210524 ENCODE Processing Pipeline b84e40f27b67e322e95a4f3fadf4beca https://www.encodeproject.org/files/ENCFF345NWE/@@download/ENCFF345NWE.bigBed hg19 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF999NMM bigWig fold change over control ENCSR410DWC ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-PYGO2-human ENCAB728YTO DNA False 2016-01-14 ENCODE 2 ENCFF004VBD, ENCFF137WND 898397371 ENCODE Processing Pipeline 5ea389a011e72ae9a7beefbc403fe7ad https://www.encodeproject.org/files/ENCFF999NMM/@@download/ENCFF999NMM.bigWig hg19 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF021CLN bed narrowPeak peaks ENCSR410DWC ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-PYGO2-human ENCAB728YTO DNA False 2016-01-14 ENCODE 2 ENCFF004VBD, ENCFF137WND 5666894 ENCODE Processing Pipeline 27517a3099699e324514f9bce53e8422 https://www.encodeproject.org/files/ENCFF021CLN/@@download/ENCFF021CLN.bed.gz hg19 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF428OGJ bigBed narrowPeak peaks ENCSR410DWC ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-PYGO2-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF311BXD 11030693 ENCODE Processing Pipeline fff03a29a12c7a5810101bf116850f36 https://www.encodeproject.org/files/ENCFF428OGJ/@@download/ENCFF428OGJ.bigBed hg19 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF311BXD bed narrowPeak peaks ENCSR410DWC ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-PYGO2-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF004VBD, ENCFF137WND, ENCFF180VYU 6647245 ENCODE Processing Pipeline 395339ff0cb584e4cd350ac595f928b6 https://www.encodeproject.org/files/ENCFF311BXD/@@download/ENCFF311BXD.bed.gz hg19 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF779TNZ bigBed narrowPeak peaks ENCSR410DWC ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-PYGO2-human ENCAB728YTO DNA False 2016-01-14 ENCODE 2 ENCFF021CLN 11337702 ENCODE Processing Pipeline 9eaa4133e40378ac8eef9ccd7d88a89a https://www.encodeproject.org/files/ENCFF779TNZ/@@download/ENCFF779TNZ.bigBed hg19 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF597ARH bigBed narrowPeak conservative idr thresholded peaks ENCSR410DWC ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-PYGO2-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF876JRX 219808 ENCODE Processing Pipeline 57de1d58153f69c2b9f83d17637b2f61 https://www.encodeproject.org/files/ENCFF597ARH/@@download/ENCFF597ARH.bigBed hg19 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF330LGL bigBed narrowPeak optimal idr thresholded peaks ENCSR410DWC ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-PYGO2-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF421VCV 270744 ENCODE Processing Pipeline f00c57171641d4b14281ba7eaf1d6f1d https://www.encodeproject.org/files/ENCFF330LGL/@@download/ENCFF330LGL.bigBed hg19 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF421VCV bed narrowPeak optimal idr thresholded peaks ENCSR410DWC ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-PYGO2-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF001TDO, ENCFF021CLN, ENCFF311BXD, ENCFF430YKE 119381 ENCODE Processing Pipeline 8e82d2a59d192105c2a8862db60b61c7 https://www.encodeproject.org/files/ENCFF421VCV/@@download/ENCFF421VCV.bed.gz hg19 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF876JRX bed narrowPeak conservative idr thresholded peaks ENCSR410DWC ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-PYGO2-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF001TDO, ENCFF021CLN, ENCFF311BXD, ENCFF430YKE 85480 ENCODE Processing Pipeline 3cca22439d969eec1c21485e3815e2e7 https://www.encodeproject.org/files/ENCFF876JRX/@@download/ENCFF876JRX.bed.gz hg19 released missing genetic modification characterization, mild to moderate bottlenecking, moderate library complexity ENCFF008RFJ bam unfiltered alignments ENCSR017GBO ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-TFDP1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 50 ENCFF697GAP, ENCFF713DPD, ENCFF807MUK 2345056306 ENCODE Processing Pipeline 7c44d3a5a5d7442115f770982d63a51f https://www.encodeproject.org/files/ENCFF008RFJ/@@download/ENCFF008RFJ.bam hg19 released borderline replicate concordance, low read depth, missing genetic modification characterization ENCFF380FZW bam unfiltered alignments ENCSR017GBO ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-TFDP1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 50 ENCFF807MUK, ENCFF987WCU 1267519682 ENCODE Processing Pipeline d20626d392ec79ba25056e6159d13b12 https://www.encodeproject.org/files/ENCFF380FZW/@@download/ENCFF380FZW.bam hg19 released borderline replicate concordance, low read depth, missing genetic modification characterization ENCFF987WCU fastq reads ENCSR017GBO ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-TFDP1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 1 50 single-ended 1138884493 Kevin White, UChicago 5ef4bce63f6cdd073a682323efecc83d SRA:SRR6213148 https://www.encodeproject.org/files/ENCFF987WCU/@@download/ENCFF987WCU.fastq.gz Illumina HiSeq 2500 /files/ENCFF414HWA/, /files/ENCFF894RGF/ released borderline replicate concordance, low read depth, missing genetic modification characterization ENCFF697GAP fastq reads ENCSR017GBO ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-TFDP1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 1 50 single-ended 956566987 Kevin White, UChicago 295647d1e56a5716506b7af6dbcb0fdc SRA:SRR6213149 https://www.encodeproject.org/files/ENCFF697GAP/@@download/ENCFF697GAP.fastq.gz Illumina HiSeq 2500 /files/ENCFF414HWA/, /files/ENCFF894RGF/ released borderline replicate concordance, low read depth, missing genetic modification characterization ENCFF713DPD fastq reads ENCSR017GBO ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-TFDP1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 1 50 single-ended 1212610370 Kevin White, UChicago d4c7436b2321c8d92a3874029e4f4c52 SRA:SRR6213150 https://www.encodeproject.org/files/ENCFF713DPD/@@download/ENCFF713DPD.fastq.gz Illumina HiSeq 2000 /files/ENCFF414HWA/, /files/ENCFF894RGF/ released borderline replicate concordance, low read depth, missing genetic modification characterization ENCFF488CVL bam alignments ENCSR017GBO ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-TFDP1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 50 ENCFF807MUK, ENCFF987WCU 981547841 ENCODE Processing Pipeline 010f5a39443b4dd4fcaa8b4585a6c7d3 https://www.encodeproject.org/files/ENCFF488CVL/@@download/ENCFF488CVL.bam hg19 released borderline replicate concordance, low read depth, missing genetic modification characterization ENCFF826XVE bam alignments ENCSR017GBO ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-TFDP1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 50 ENCFF697GAP, ENCFF713DPD, ENCFF807MUK 1812676020 ENCODE Processing Pipeline d5742737643a0c14652790a1984e395a https://www.encodeproject.org/files/ENCFF826XVE/@@download/ENCFF826XVE.bam hg19 released borderline replicate concordance, low read depth, missing genetic modification characterization ENCFF725HXM bigWig signal p-value ENCSR017GBO ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-TFDP1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF488CVL, ENCFF744LSD 611707082 ENCODE Processing Pipeline 4ddc7405cbc2f49b400c8f4cea7d5a19 https://www.encodeproject.org/files/ENCFF725HXM/@@download/ENCFF725HXM.bigWig hg19 released borderline replicate concordance, low read depth, missing genetic modification characterization ENCFF945UYC bigWig fold change over control ENCSR017GBO ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-TFDP1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF488CVL, ENCFF744LSD 561717817 ENCODE Processing Pipeline 30b55ab46ea0dcc168cf4f097c0d384b https://www.encodeproject.org/files/ENCFF945UYC/@@download/ENCFF945UYC.bigWig hg19 released borderline replicate concordance, low read depth, missing genetic modification characterization ENCFF231UMI bam unfiltered alignments ENCSR017GBO ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-TFDP1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 50 ENCFF643CGH, ENCFF987WCU 1270871114 ENCODE Processing Pipeline 0a1ac220cef4a8e15a69eae9b3c971b5 https://www.encodeproject.org/files/ENCFF231UMI/@@download/ENCFF231UMI.bam GRCh38 released borderline replicate concordance, low read depth, missing genetic modification characterization ENCFF046AMS bam unfiltered alignments ENCSR017GBO ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-TFDP1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 50 ENCFF643CGH, ENCFF697GAP, ENCFF713DPD 2351814276 ENCODE Processing Pipeline 76ee214bef35f99217ec8e10ea3b6da4 https://www.encodeproject.org/files/ENCFF046AMS/@@download/ENCFF046AMS.bam GRCh38 released borderline replicate concordance, low read depth, missing genetic modification characterization ENCFF070MZX bam alignments ENCSR017GBO ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-TFDP1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 50 ENCFF643CGH, ENCFF987WCU 981111910 ENCODE Processing Pipeline 81305870c43be29e863c269a6b5969e2 https://www.encodeproject.org/files/ENCFF070MZX/@@download/ENCFF070MZX.bam GRCh38 released borderline replicate concordance, low read depth, missing genetic modification characterization ENCFF795XBH bam alignments ENCSR017GBO ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-TFDP1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 50 ENCFF643CGH, ENCFF697GAP, ENCFF713DPD 1811969789 ENCODE Processing Pipeline c0cd99a89d1c076024147d74e1480b85 https://www.encodeproject.org/files/ENCFF795XBH/@@download/ENCFF795XBH.bam GRCh38 released borderline replicate concordance, low read depth, missing genetic modification characterization ENCFF291WAT bigWig signal p-value ENCSR017GBO ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-TFDP1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF070MZX, ENCFF795UVG 590719070 ENCODE Processing Pipeline 982598092733a3ab98213ab4d45c7e31 https://www.encodeproject.org/files/ENCFF291WAT/@@download/ENCFF291WAT.bigWig GRCh38 released borderline replicate concordance, low read depth, missing genetic modification characterization ENCFF005XBE bigWig signal p-value ENCSR017GBO ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-TFDP1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF795UVG, ENCFF795XBH 838659108 ENCODE Processing Pipeline e3a50c5ef6bf14f99aa0e7a2324e1d1c https://www.encodeproject.org/files/ENCFF005XBE/@@download/ENCFF005XBE.bigWig GRCh38 released borderline replicate concordance, low read depth, missing genetic modification characterization ENCFF138ZEY bigWig signal p-value ENCSR017GBO ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-TFDP1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF070MZX, ENCFF795UVG, ENCFF795XBH 823369387 ENCODE Processing Pipeline 6f94e8be8d02af544ebb2ff0440eddaf https://www.encodeproject.org/files/ENCFF138ZEY/@@download/ENCFF138ZEY.bigWig GRCh38 released borderline replicate concordance, low read depth, missing genetic modification characterization ENCFF775UAE bigWig fold change over control ENCSR017GBO ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-TFDP1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF795UVG, ENCFF795XBH 839815793 ENCODE Processing Pipeline 16b1a1b113ac24564da3f00c0875f9a5 https://www.encodeproject.org/files/ENCFF775UAE/@@download/ENCFF775UAE.bigWig GRCh38 released borderline replicate concordance, low read depth, missing genetic modification characterization ENCFF603MHB bigWig fold change over control ENCSR017GBO ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-TFDP1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF070MZX, ENCFF795UVG 557491388 ENCODE Processing Pipeline 1a244ac34ec46e223b121d956416e285 https://www.encodeproject.org/files/ENCFF603MHB/@@download/ENCFF603MHB.bigWig GRCh38 released borderline replicate concordance, low read depth, missing genetic modification characterization ENCFF791FIG bigWig fold change over control ENCSR017GBO ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-TFDP1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF070MZX, ENCFF795UVG, ENCFF795XBH 1079506310 ENCODE Processing Pipeline f8250371e0e652ac85e6e029629892de https://www.encodeproject.org/files/ENCFF791FIG/@@download/ENCFF791FIG.bigWig GRCh38 released borderline replicate concordance, low read depth, missing genetic modification characterization ENCFF963OMH bed narrowPeak peaks ENCSR017GBO ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-TFDP1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF795UVG, ENCFF795XBH 7060584 ENCODE Processing Pipeline c27b230a997f55b6d03766cadf4d692f https://www.encodeproject.org/files/ENCFF963OMH/@@download/ENCFF963OMH.bed.gz GRCh38 released borderline replicate concordance, low read depth, missing genetic modification characterization ENCFF215XBE bigBed narrowPeak peaks ENCSR017GBO ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-TFDP1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF963OMH 12532734 ENCODE Processing Pipeline e0957f4d43366daa8f0a130066e97738 https://www.encodeproject.org/files/ENCFF215XBE/@@download/ENCFF215XBE.bigBed GRCh38 released borderline replicate concordance, low read depth, missing genetic modification characterization ENCFF261YCK bed narrowPeak conservative idr thresholded peaks ENCSR017GBO ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-TFDP1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF100GOE, ENCFF419RSJ, ENCFF515FAV, ENCFF963OMH 343232 ENCODE Processing Pipeline 4afb866025b1d03b43c03d677989f767 https://www.encodeproject.org/files/ENCFF261YCK/@@download/ENCFF261YCK.bed.gz GRCh38 released borderline replicate concordance, low read depth, missing genetic modification characterization ENCFF354QYM bed narrowPeak optimal idr thresholded peaks ENCSR017GBO ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-TFDP1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF100GOE, ENCFF419RSJ, ENCFF515FAV, ENCFF963OMH 413663 ENCODE Processing Pipeline fff52e8bd25e2bdfe21098cee0a7dc56 https://www.encodeproject.org/files/ENCFF354QYM/@@download/ENCFF354QYM.bed.gz GRCh38 released borderline replicate concordance, low read depth, missing genetic modification characterization ENCFF788FNM bigBed narrowPeak optimal idr thresholded peaks ENCSR017GBO ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-TFDP1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF354QYM 1018950 ENCODE Processing Pipeline 52eab11479bf29420192e4ecad68087c https://www.encodeproject.org/files/ENCFF788FNM/@@download/ENCFF788FNM.bigBed GRCh38 released borderline replicate concordance, low read depth, missing genetic modification characterization ENCFF515FAV bed narrowPeak peaks ENCSR017GBO ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-TFDP1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF070MZX, ENCFF795UVG 6619030 ENCODE Processing Pipeline 48366b3c2ed51cac2f10f78eb4b0d06c https://www.encodeproject.org/files/ENCFF515FAV/@@download/ENCFF515FAV.bed.gz GRCh38 released borderline replicate concordance, low read depth, missing genetic modification characterization ENCFF100GOE bed narrowPeak peaks ENCSR017GBO ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-TFDP1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF070MZX, ENCFF795UVG, ENCFF795XBH 7270021 ENCODE Processing Pipeline b40b5b35d6fcf3c17038e1f5d77a4d4f https://www.encodeproject.org/files/ENCFF100GOE/@@download/ENCFF100GOE.bed.gz GRCh38 released borderline replicate concordance, low read depth, missing genetic modification characterization ENCFF323JTA bigBed narrowPeak peaks ENCSR017GBO ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-TFDP1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF515FAV 12643666 ENCODE Processing Pipeline 972502799fb151882e8ad7a0be1e2356 https://www.encodeproject.org/files/ENCFF323JTA/@@download/ENCFF323JTA.bigBed GRCh38 released borderline replicate concordance, low read depth, missing genetic modification characterization ENCFF324XOX bigBed narrowPeak peaks ENCSR017GBO ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-TFDP1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF100GOE 12502712 ENCODE Processing Pipeline ac3f23015d25a1004dc74cbac1282eaa https://www.encodeproject.org/files/ENCFF324XOX/@@download/ENCFF324XOX.bigBed GRCh38 released borderline replicate concordance, low read depth, missing genetic modification characterization ENCFF678HTJ bigBed narrowPeak conservative idr thresholded peaks ENCSR017GBO ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-TFDP1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF261YCK 876682 ENCODE Processing Pipeline 2c3ac14a638762402bf7339e803696f8 https://www.encodeproject.org/files/ENCFF678HTJ/@@download/ENCFF678HTJ.bigBed GRCh38 released borderline replicate concordance, low read depth, missing genetic modification characterization ENCFF957CIS bigWig signal p-value ENCSR017GBO ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-TFDP1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF744LSD, ENCFF826XVE 833239663 ENCODE Processing Pipeline 361406affe6a3d6edcfc790b9fe3c23f https://www.encodeproject.org/files/ENCFF957CIS/@@download/ENCFF957CIS.bigWig hg19 released borderline replicate concordance, low read depth, missing genetic modification characterization ENCFF419SJF bigWig signal p-value ENCSR017GBO ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-TFDP1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF488CVL, ENCFF744LSD, ENCFF826XVE 816555171 ENCODE Processing Pipeline 2f408cbdee1474655ce09e04a4a24397 https://www.encodeproject.org/files/ENCFF419SJF/@@download/ENCFF419SJF.bigWig hg19 released borderline replicate concordance, low read depth, missing genetic modification characterization ENCFF173YRZ bigBed narrowPeak conservative idr thresholded peaks ENCSR017GBO ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-TFDP1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF179TYN 874945 ENCODE Processing Pipeline 1bb759c587138ce0673c80df126e5cfa https://www.encodeproject.org/files/ENCFF173YRZ/@@download/ENCFF173YRZ.bigBed hg19 released borderline replicate concordance, low read depth, missing genetic modification characterization ENCFF462NRC bigWig fold change over control ENCSR017GBO ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-TFDP1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF488CVL, ENCFF744LSD, ENCFF826XVE 1067497114 ENCODE Processing Pipeline 95fca62a89a55465e53fcba909be9135 https://www.encodeproject.org/files/ENCFF462NRC/@@download/ENCFF462NRC.bigWig hg19 released borderline replicate concordance, low read depth, missing genetic modification characterization ENCFF630TKH bigBed narrowPeak peaks ENCSR017GBO ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-TFDP1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF250VQN 12649287 ENCODE Processing Pipeline 538668d0d8d4f777f08ddc325871d560 https://www.encodeproject.org/files/ENCFF630TKH/@@download/ENCFF630TKH.bigBed hg19 released borderline replicate concordance, low read depth, missing genetic modification characterization ENCFF179TYN bed narrowPeak conservative idr thresholded peaks ENCSR017GBO ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-TFDP1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF001TDO, ENCFF250VQN, ENCFF676RSO, ENCFF833HIY 343223 ENCODE Processing Pipeline bd96e0762553afef00b3610bcbf102cd https://www.encodeproject.org/files/ENCFF179TYN/@@download/ENCFF179TYN.bed.gz hg19 released borderline replicate concordance, low read depth, missing genetic modification characterization ENCFF250VQN bed narrowPeak peaks ENCSR017GBO ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-TFDP1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF488CVL, ENCFF744LSD 6611423 ENCODE Processing Pipeline 2b3b093652493683ee15e2cad32627d2 https://www.encodeproject.org/files/ENCFF250VQN/@@download/ENCFF250VQN.bed.gz hg19 released borderline replicate concordance, low read depth, missing genetic modification characterization ENCFF701MXF bed narrowPeak optimal idr thresholded peaks ENCSR017GBO ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-TFDP1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF001TDO, ENCFF250VQN, ENCFF676RSO, ENCFF833HIY 415746 ENCODE Processing Pipeline 708b867532b9183badb53e580e240bf4 https://www.encodeproject.org/files/ENCFF701MXF/@@download/ENCFF701MXF.bed.gz hg19 released borderline replicate concordance, low read depth, missing genetic modification characterization ENCFF036NUD bigBed narrowPeak optimal idr thresholded peaks ENCSR017GBO ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-TFDP1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF701MXF 1022165 ENCODE Processing Pipeline 02b60fd1ea44b570bd62f34651270b21 https://www.encodeproject.org/files/ENCFF036NUD/@@download/ENCFF036NUD.bigBed hg19 released borderline replicate concordance, low read depth, missing genetic modification characterization ENCFF993DAV bigWig fold change over control ENCSR017GBO ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-TFDP1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF744LSD, ENCFF826XVE 836489046 ENCODE Processing Pipeline c5ecfa06b030f81b188d0235b573982a https://www.encodeproject.org/files/ENCFF993DAV/@@download/ENCFF993DAV.bigWig hg19 released borderline replicate concordance, low read depth, missing genetic modification characterization ENCFF833HIY bed narrowPeak peaks ENCSR017GBO ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-TFDP1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF488CVL, ENCFF744LSD, ENCFF826XVE 7268911 ENCODE Processing Pipeline 21906adc3fe5725ecb68b1b4f7718061 https://www.encodeproject.org/files/ENCFF833HIY/@@download/ENCFF833HIY.bed.gz hg19 released borderline replicate concordance, low read depth, missing genetic modification characterization ENCFF235GIP bigBed narrowPeak peaks ENCSR017GBO ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-TFDP1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF676RSO 12528414 ENCODE Processing Pipeline 2e19148d6bcc7bd9b797eb3aea836e02 https://www.encodeproject.org/files/ENCFF235GIP/@@download/ENCFF235GIP.bigBed hg19 released borderline replicate concordance, low read depth, missing genetic modification characterization ENCFF917ZSW bigBed narrowPeak peaks ENCSR017GBO ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-TFDP1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF833HIY 12493871 ENCODE Processing Pipeline 4ea05ae028af3f227ddecf6ddf28aa38 https://www.encodeproject.org/files/ENCFF917ZSW/@@download/ENCFF917ZSW.bigBed hg19 released borderline replicate concordance, low read depth, missing genetic modification characterization ENCFF676RSO bed narrowPeak peaks ENCSR017GBO ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-TFDP1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF744LSD, ENCFF826XVE 7060269 ENCODE Processing Pipeline ed76e1e7d3291d5c21336cc02f9ee3e3 https://www.encodeproject.org/files/ENCFF676RSO/@@download/ENCFF676RSO.bed.gz hg19 released borderline replicate concordance, low read depth, missing genetic modification characterization ENCFF812OGD bam unfiltered alignments ENCSR742TMU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF282-human ENCAB503NQV DNA False 2018-01-26 ENCODE 2 100 ENCFF455ZRR, ENCFF807MUK, ENCFF899JCN 5560719362 ENCODE Processing Pipeline 3ae77734571e1c2ed560384123603897 https://www.encodeproject.org/files/ENCFF812OGD/@@download/ENCFF812OGD.bam hg19 released mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF667ZPE bam unfiltered alignments ENCSR742TMU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF282-human ENCAB503NQV DNA False 2018-01-26 ENCODE 1 100 ENCFF222CTH, ENCFF807MUK, ENCFF908NRM 6951049260 ENCODE Processing Pipeline 0deb6b73e06950ada19595b487f30b50 https://www.encodeproject.org/files/ENCFF667ZPE/@@download/ENCFF667ZPE.bam hg19 released mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF455ZRR fastq reads ENCSR742TMU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF282-human ENCAB503NQV DNA False 2018-01-26 ENCODE 2 1 100 paired-ended 2 ENCFF899JCN 2577108797 Michael Snyder, Stanford 03bc959f4c337c979bb68553f619a5eb https://www.encodeproject.org/files/ENCFF455ZRR/@@download/ENCFF455ZRR.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFA/ released mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF908NRM fastq reads ENCSR742TMU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF282-human ENCAB503NQV DNA False 2018-01-26 ENCODE 1 1 100 paired-ended 1 ENCFF222CTH 3301924049 Michael Snyder, Stanford c0b6bd45d294c60c03dd27089c8c0d0b https://www.encodeproject.org/files/ENCFF908NRM/@@download/ENCFF908NRM.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFF/ released mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF222CTH fastq reads ENCSR742TMU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF282-human ENCAB503NQV DNA False 2018-01-26 ENCODE 1 1 100 paired-ended 2 ENCFF908NRM 3308293778 Michael Snyder, Stanford 418739b825539609904ecd5f6e6b77c9 https://www.encodeproject.org/files/ENCFF222CTH/@@download/ENCFF222CTH.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFH/ released mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF899JCN fastq reads ENCSR742TMU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF282-human ENCAB503NQV DNA False 2018-01-26 ENCODE 2 1 100 paired-ended 1 ENCFF455ZRR 2579848696 Michael Snyder, Stanford 16ae7844c6146fa72aebe789539847d2 https://www.encodeproject.org/files/ENCFF899JCN/@@download/ENCFF899JCN.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFD/ released mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF416JQZ bam alignments ENCSR742TMU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF282-human ENCAB503NQV DNA False 2018-01-26 ENCODE 2 100 ENCFF455ZRR, ENCFF807MUK, ENCFF899JCN 4393457590 ENCODE Processing Pipeline 79a869dd95a68c2ca52364c4ae9e7211 https://www.encodeproject.org/files/ENCFF416JQZ/@@download/ENCFF416JQZ.bam hg19 released mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF860EBI bam alignments ENCSR742TMU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF282-human ENCAB503NQV DNA False 2018-01-26 ENCODE 1 100 ENCFF222CTH, ENCFF807MUK, ENCFF908NRM 5234048696 ENCODE Processing Pipeline be1cdf6a81db41ad91317e183e278148 https://www.encodeproject.org/files/ENCFF860EBI/@@download/ENCFF860EBI.bam hg19 released mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF294YIV bigWig signal p-value ENCSR742TMU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF282-human ENCAB503NQV DNA False 2018-01-26 ENCODE 1 ENCFF581ZJL, ENCFF860EBI 1104900611 ENCODE Processing Pipeline d9bdf10e7742857898bcf0b70077687f https://www.encodeproject.org/files/ENCFF294YIV/@@download/ENCFF294YIV.bigWig hg19 released mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF933ZOI bigWig signal p-value ENCSR742TMU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF282-human ENCAB503NQV DNA False 2018-01-26 ENCODE 2 ENCFF051LWI, ENCFF416JQZ 1161574388 ENCODE Processing Pipeline dccfe1669706051a4d5ce1bdf04396c6 https://www.encodeproject.org/files/ENCFF933ZOI/@@download/ENCFF933ZOI.bigWig hg19 released mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF739KRI bigWig signal p-value ENCSR742TMU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF282-human ENCAB503NQV DNA False 2018-01-26 ENCODE 1, 2 ENCFF051LWI, ENCFF416JQZ, ENCFF581ZJL, ENCFF860EBI 2189823278 ENCODE Processing Pipeline 090306c510ead1b1798581fc9d028f8d https://www.encodeproject.org/files/ENCFF739KRI/@@download/ENCFF739KRI.bigWig hg19 released mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF040FYC bigWig fold change over control ENCSR742TMU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF282-human ENCAB503NQV DNA False 2018-01-26 ENCODE 1 ENCFF581ZJL, ENCFF860EBI 1414102103 ENCODE Processing Pipeline c7c483476d7df7e9d495c8477ec9a619 https://www.encodeproject.org/files/ENCFF040FYC/@@download/ENCFF040FYC.bigWig hg19 released mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF812XYN bigWig fold change over control ENCSR742TMU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF282-human ENCAB503NQV DNA False 2018-01-26 ENCODE 2 ENCFF051LWI, ENCFF416JQZ 1208019991 ENCODE Processing Pipeline 5a2bceba735e2db75ba6240ce4df0d23 https://www.encodeproject.org/files/ENCFF812XYN/@@download/ENCFF812XYN.bigWig hg19 released mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF290UIT bigWig fold change over control ENCSR742TMU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF282-human ENCAB503NQV DNA False 2018-01-26 ENCODE 1, 2 ENCFF051LWI, ENCFF416JQZ, ENCFF581ZJL, ENCFF860EBI 2235012328 ENCODE Processing Pipeline 2c55cc85bb4f326eef371c03d5ef2656 https://www.encodeproject.org/files/ENCFF290UIT/@@download/ENCFF290UIT.bigWig hg19 released mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF085YVB bam unfiltered alignments ENCSR742TMU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF282-human ENCAB503NQV DNA False 2018-01-26 ENCODE 2 100 ENCFF455ZRR, ENCFF643CGH, ENCFF899JCN 5566505449 ENCODE Processing Pipeline 40a8555c23c27f60eb43142d6ef0190d https://www.encodeproject.org/files/ENCFF085YVB/@@download/ENCFF085YVB.bam GRCh38 released mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF139YNO bam unfiltered alignments ENCSR742TMU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF282-human ENCAB503NQV DNA False 2018-01-26 ENCODE 1 100 ENCFF222CTH, ENCFF643CGH, ENCFF908NRM 6957914426 ENCODE Processing Pipeline 2d7db18591b104188dc5f8c8d8dbd551 https://www.encodeproject.org/files/ENCFF139YNO/@@download/ENCFF139YNO.bam GRCh38 released mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF553FEG bam alignments ENCSR742TMU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF282-human ENCAB503NQV DNA False 2018-01-26 ENCODE 2 100 ENCFF455ZRR, ENCFF643CGH, ENCFF899JCN 4395899483 ENCODE Processing Pipeline 9144b23a4c212e7484f31e3f3ca909e7 https://www.encodeproject.org/files/ENCFF553FEG/@@download/ENCFF553FEG.bam GRCh38 released mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF584VYO bam alignments ENCSR742TMU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF282-human ENCAB503NQV DNA False 2018-01-26 ENCODE 1 100 ENCFF222CTH, ENCFF643CGH, ENCFF908NRM 5237411875 ENCODE Processing Pipeline 96ed1a8f0864ce57cc4059bd049434e8 https://www.encodeproject.org/files/ENCFF584VYO/@@download/ENCFF584VYO.bam GRCh38 released mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF526KTR bigWig signal p-value ENCSR742TMU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF282-human ENCAB503NQV DNA False 2018-01-26 ENCODE 1 ENCFF584VYO, ENCFF910IKB 1101016587 ENCODE Processing Pipeline d245ce78b81a35f9270c7110fcb8ea27 https://www.encodeproject.org/files/ENCFF526KTR/@@download/ENCFF526KTR.bigWig GRCh38 released mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF088JLD bigWig signal p-value ENCSR742TMU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF282-human ENCAB503NQV DNA False 2018-01-26 ENCODE 2 ENCFF227IZS, ENCFF553FEG 1152407038 ENCODE Processing Pipeline 9c9b41419195beda5fda5ec0d2b0bd5d https://www.encodeproject.org/files/ENCFF088JLD/@@download/ENCFF088JLD.bigWig GRCh38 released mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF685VJY bigWig signal p-value ENCSR742TMU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF282-human ENCAB503NQV DNA False 2018-01-26 ENCODE 1, 2 ENCFF227IZS, ENCFF553FEG, ENCFF584VYO, ENCFF910IKB 2172846768 ENCODE Processing Pipeline b464a1af8e6736ee68fdbb20136b5487 https://www.encodeproject.org/files/ENCFF685VJY/@@download/ENCFF685VJY.bigWig GRCh38 released mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF428DLG bigWig fold change over control ENCSR742TMU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF282-human ENCAB503NQV DNA False 2018-01-26 ENCODE 1 ENCFF584VYO, ENCFF910IKB 1387280176 ENCODE Processing Pipeline 5bf8bf49da9dc75c50c1ad638c23bf02 https://www.encodeproject.org/files/ENCFF428DLG/@@download/ENCFF428DLG.bigWig GRCh38 released mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF695WUM bigWig fold change over control ENCSR742TMU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF282-human ENCAB503NQV DNA False 2018-01-26 ENCODE 2 ENCFF227IZS, ENCFF553FEG 1208391730 ENCODE Processing Pipeline 538f37d0793bab5e469bb917a0638ada https://www.encodeproject.org/files/ENCFF695WUM/@@download/ENCFF695WUM.bigWig GRCh38 released mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF916WAT bigWig fold change over control ENCSR742TMU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF282-human ENCAB503NQV DNA False 2018-01-26 ENCODE 1, 2 ENCFF227IZS, ENCFF553FEG, ENCFF584VYO, ENCFF910IKB 2238136668 ENCODE Processing Pipeline 9fe75324199aace5a8a6c95c46171d96 https://www.encodeproject.org/files/ENCFF916WAT/@@download/ENCFF916WAT.bigWig GRCh38 released mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF586LFC bigBed narrowPeak peaks ENCSR742TMU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF282-human ENCAB503NQV DNA False 2018-01-26 ENCODE 1 ENCFF419WWB 13244685 ENCODE Processing Pipeline 69001f77d5619910b93adc6481fcddc1 https://www.encodeproject.org/files/ENCFF586LFC/@@download/ENCFF586LFC.bigBed GRCh38 released mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF657MZX bigBed narrowPeak peaks ENCSR742TMU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF282-human ENCAB503NQV DNA False 2018-01-26 ENCODE 1, 2 ENCFF530MXL 13139183 ENCODE Processing Pipeline e4ef49d805e727161e430ae245eb86dc https://www.encodeproject.org/files/ENCFF657MZX/@@download/ENCFF657MZX.bigBed GRCh38 released mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF682EHA bed narrowPeak peaks ENCSR742TMU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF282-human ENCAB503NQV DNA False 2018-01-26 ENCODE 2 ENCFF227IZS, ENCFF553FEG 6802229 ENCODE Processing Pipeline 7709eda1d04a4d416df164b871a3d09a https://www.encodeproject.org/files/ENCFF682EHA/@@download/ENCFF682EHA.bed.gz GRCh38 released mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF530MXL bed narrowPeak peaks ENCSR742TMU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF282-human ENCAB503NQV DNA False 2018-01-26 ENCODE 1, 2 ENCFF227IZS, ENCFF553FEG, ENCFF584VYO, ENCFF910IKB 7266300 ENCODE Processing Pipeline a54c01bd414a3195cf04f04f3691fd2f https://www.encodeproject.org/files/ENCFF530MXL/@@download/ENCFF530MXL.bed.gz GRCh38 released mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF419WWB bed narrowPeak peaks ENCSR742TMU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF282-human ENCAB503NQV DNA False 2018-01-26 ENCODE 1 ENCFF584VYO, ENCFF910IKB 6861907 ENCODE Processing Pipeline 4ec29d2c8f4d69f2e3da2c5162bfa443 https://www.encodeproject.org/files/ENCFF419WWB/@@download/ENCFF419WWB.bed.gz GRCh38 released mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF622HKL bigBed narrowPeak peaks ENCSR742TMU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF282-human ENCAB503NQV DNA False 2018-01-26 ENCODE 2 ENCFF682EHA 13255322 ENCODE Processing Pipeline 956e7be8ea5a353b8bf22c73acba3bd5 https://www.encodeproject.org/files/ENCFF622HKL/@@download/ENCFF622HKL.bigBed GRCh38 released mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF330GYP bigBed narrowPeak optimal idr thresholded peaks ENCSR742TMU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF282-human ENCAB503NQV DNA False 2018-01-26 ENCODE 1, 2 ENCFF596JDS 538506 ENCODE Processing Pipeline 25bb06d3b0c27fba4a46597c94fa866f https://www.encodeproject.org/files/ENCFF330GYP/@@download/ENCFF330GYP.bigBed GRCh38 released mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF337XJU bed narrowPeak conservative idr thresholded peaks ENCSR742TMU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF282-human ENCAB503NQV DNA False 2018-01-26 ENCODE 1, 2 ENCFF419RSJ, ENCFF419WWB, ENCFF530MXL, ENCFF682EHA 164198 ENCODE Processing Pipeline b507ea7b356e505c62edf936a25a3391 https://www.encodeproject.org/files/ENCFF337XJU/@@download/ENCFF337XJU.bed.gz GRCh38 released mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF904ZWB bigBed narrowPeak conservative idr thresholded peaks ENCSR742TMU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF282-human ENCAB503NQV DNA False 2018-01-26 ENCODE 1, 2 ENCFF337XJU 395116 ENCODE Processing Pipeline e3a3f0b7cb36da457ffda1696ffd5d49 https://www.encodeproject.org/files/ENCFF904ZWB/@@download/ENCFF904ZWB.bigBed GRCh38 released mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF596JDS bed narrowPeak optimal idr thresholded peaks ENCSR742TMU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF282-human ENCAB503NQV DNA False 2018-01-26 ENCODE 1, 2 ENCFF419RSJ, ENCFF419WWB, ENCFF530MXL, ENCFF682EHA 248166 ENCODE Processing Pipeline 8669fe48aed2c71529f96de233393304 https://www.encodeproject.org/files/ENCFF596JDS/@@download/ENCFF596JDS.bed.gz GRCh38 released mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF603AEE bed narrowPeak peaks ENCSR742TMU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF282-human ENCAB503NQV DNA False 2018-01-26 ENCODE 1, 2 ENCFF051LWI, ENCFF416JQZ, ENCFF581ZJL, ENCFF860EBI 7263264 ENCODE Processing Pipeline 96046dca93f9cb913eb857ff55dcb341 https://www.encodeproject.org/files/ENCFF603AEE/@@download/ENCFF603AEE.bed.gz hg19 released mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF397VXH bigBed narrowPeak conservative idr thresholded peaks ENCSR742TMU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF282-human ENCAB503NQV DNA False 2018-01-26 ENCODE 1, 2 ENCFF188ZMQ 392724 ENCODE Processing Pipeline fb23c40954b518152fd2d217fc3c912e https://www.encodeproject.org/files/ENCFF397VXH/@@download/ENCFF397VXH.bigBed hg19 released mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF581ZZT bed narrowPeak optimal idr thresholded peaks ENCSR742TMU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF282-human ENCAB503NQV DNA False 2018-01-26 ENCODE 1, 2 ENCFF001TDO, ENCFF313WJM, ENCFF603AEE, ENCFF802MWF 244445 ENCODE Processing Pipeline 1ee0c43847b45d2db7e83b4bc1c076d2 https://www.encodeproject.org/files/ENCFF581ZZT/@@download/ENCFF581ZZT.bed.gz hg19 released mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF941RHA bigBed narrowPeak optimal idr thresholded peaks ENCSR742TMU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF282-human ENCAB503NQV DNA False 2018-01-26 ENCODE 1, 2 ENCFF581ZZT 529319 ENCODE Processing Pipeline 5e32bb902a7fa5db11fb522f4a6623cf https://www.encodeproject.org/files/ENCFF941RHA/@@download/ENCFF941RHA.bigBed hg19 released mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF802MWF bed narrowPeak peaks ENCSR742TMU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF282-human ENCAB503NQV DNA False 2018-01-26 ENCODE 2 ENCFF051LWI, ENCFF416JQZ 6807370 ENCODE Processing Pipeline b4209d28352bb320a3f5260cf60d74b3 https://www.encodeproject.org/files/ENCFF802MWF/@@download/ENCFF802MWF.bed.gz hg19 released mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF481RMP bigBed narrowPeak peaks ENCSR742TMU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF282-human ENCAB503NQV DNA False 2018-01-26 ENCODE 1 ENCFF313WJM 13225093 ENCODE Processing Pipeline 75b9a87ad20b9c4a4c1c69ab62007863 https://www.encodeproject.org/files/ENCFF481RMP/@@download/ENCFF481RMP.bigBed hg19 released mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF313WJM bed narrowPeak peaks ENCSR742TMU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF282-human ENCAB503NQV DNA False 2018-01-26 ENCODE 1 ENCFF581ZJL, ENCFF860EBI 6856971 ENCODE Processing Pipeline a0f9ce9c8a662389415db892470f3db3 https://www.encodeproject.org/files/ENCFF313WJM/@@download/ENCFF313WJM.bed.gz hg19 released mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF160UEJ bigBed narrowPeak peaks ENCSR742TMU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF282-human ENCAB503NQV DNA False 2018-01-26 ENCODE 1, 2 ENCFF603AEE 13123195 ENCODE Processing Pipeline 1ddee352be5ef0c2a141010f61683549 https://www.encodeproject.org/files/ENCFF160UEJ/@@download/ENCFF160UEJ.bigBed hg19 released mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF188ZMQ bed narrowPeak conservative idr thresholded peaks ENCSR742TMU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF282-human ENCAB503NQV DNA False 2018-01-26 ENCODE 1, 2 ENCFF001TDO, ENCFF313WJM, ENCFF603AEE, ENCFF802MWF 163896 ENCODE Processing Pipeline 0148adf3177f71c956b265d5311b7e9d https://www.encodeproject.org/files/ENCFF188ZMQ/@@download/ENCFF188ZMQ.bed.gz hg19 released mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF097YFC bigBed narrowPeak peaks ENCSR742TMU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF282-human ENCAB503NQV DNA False 2018-01-26 ENCODE 2 ENCFF802MWF 13246313 ENCODE Processing Pipeline 10c3a964a330f2547b0be1f005b9c78c https://www.encodeproject.org/files/ENCFF097YFC/@@download/ENCFF097YFC.bigBed hg19 released mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF735PSR bam unfiltered alignments ENCSR567JEU ChIP-seq EFO:0002067 K562 cell line Homo sapiens YBX3-human ENCAB021IRD DNA False 2016-09-01 ENCODE 1 100 ENCFF276AYD, ENCFF519SRC, ENCFF807MUK 5314749667 ENCODE Processing Pipeline 54e916f886952ea01577d933569b4261 https://www.encodeproject.org/files/ENCFF735PSR/@@download/ENCFF735PSR.bam hg19 released borderline replicate concordance ENCFF113ERD bam unfiltered alignments ENCSR567JEU ChIP-seq EFO:0002067 K562 cell line Homo sapiens YBX3-human ENCAB021IRD DNA False 2016-09-01 ENCODE 2 100 ENCFF504AIH, ENCFF590TAH, ENCFF807MUK 5735149819 ENCODE Processing Pipeline 8687c131992fa9be548003aa6ae84e4b https://www.encodeproject.org/files/ENCFF113ERD/@@download/ENCFF113ERD.bam hg19 released borderline replicate concordance ENCFF276AYD fastq reads ENCSR567JEU ChIP-seq EFO:0002067 K562 cell line Homo sapiens YBX3-human ENCAB021IRD DNA False 2016-09-01 ENCODE 1 1 100 paired-ended 1 ENCFF519SRC 2431318871 Michael Snyder, Stanford 67b81ef73d0ee3829b4b6947ad43ce9a SRA:SRR5111801 https://www.encodeproject.org/files/ENCFF276AYD/@@download/ENCFF276AYD.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFF/ released borderline replicate concordance ENCFF519SRC fastq reads ENCSR567JEU ChIP-seq EFO:0002067 K562 cell line Homo sapiens YBX3-human ENCAB021IRD DNA False 2016-09-01 ENCODE 1 1 100 paired-ended 2 ENCFF276AYD 2437227767 Michael Snyder, Stanford 38869be97aaa384846cea4cd8dc51192 SRA:SRR5111801 https://www.encodeproject.org/files/ENCFF519SRC/@@download/ENCFF519SRC.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFH/ released borderline replicate concordance ENCFF590TAH fastq reads ENCSR567JEU ChIP-seq EFO:0002067 K562 cell line Homo sapiens YBX3-human ENCAB021IRD DNA False 2016-09-01 ENCODE 2 1 100 paired-ended 1 ENCFF504AIH 2610784610 Michael Snyder, Stanford 7591fe9a3d5feecedfb3e342978556bc SRA:SRR5111800 https://www.encodeproject.org/files/ENCFF590TAH/@@download/ENCFF590TAH.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFD/ released borderline replicate concordance ENCFF504AIH fastq reads ENCSR567JEU ChIP-seq EFO:0002067 K562 cell line Homo sapiens YBX3-human ENCAB021IRD DNA False 2016-09-01 ENCODE 2 1 100 paired-ended 2 ENCFF590TAH 2605858683 Michael Snyder, Stanford af8cfe186781027a66b5145afe3fe91b SRA:SRR5111800 https://www.encodeproject.org/files/ENCFF504AIH/@@download/ENCFF504AIH.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFA/ released borderline replicate concordance ENCFF072EMM bam alignments ENCSR567JEU ChIP-seq EFO:0002067 K562 cell line Homo sapiens YBX3-human ENCAB021IRD DNA False 2016-09-01 ENCODE 1 100 ENCFF276AYD, ENCFF519SRC, ENCFF807MUK 4325134973 ENCODE Processing Pipeline 054db2e0ea1c6493e8706a30abdd0d5d https://www.encodeproject.org/files/ENCFF072EMM/@@download/ENCFF072EMM.bam hg19 released borderline replicate concordance ENCFF581KEJ bam alignments ENCSR567JEU ChIP-seq EFO:0002067 K562 cell line Homo sapiens YBX3-human ENCAB021IRD DNA False 2016-09-01 ENCODE 2 100 ENCFF504AIH, ENCFF590TAH, ENCFF807MUK 5000324879 ENCODE Processing Pipeline ac616ee379d3a5085ca0aa7a848b4851 https://www.encodeproject.org/files/ENCFF581KEJ/@@download/ENCFF581KEJ.bam hg19 released borderline replicate concordance ENCFF528PLH bigWig signal p-value ENCSR567JEU ChIP-seq EFO:0002067 K562 cell line Homo sapiens YBX3-human ENCAB021IRD DNA False 2016-09-01 ENCODE 1 ENCFF072EMM, ENCFF581ZJL 1152155972 ENCODE Processing Pipeline 664db732b21eb930094b112fba672841 https://www.encodeproject.org/files/ENCFF528PLH/@@download/ENCFF528PLH.bigWig hg19 released borderline replicate concordance ENCFF431SYT bigWig signal p-value ENCSR567JEU ChIP-seq EFO:0002067 K562 cell line Homo sapiens YBX3-human ENCAB021IRD DNA False 2016-09-01 ENCODE 2 ENCFF051LWI, ENCFF581KEJ 1140042596 ENCODE Processing Pipeline 44841c2b2f31d21f07fce515dec967bf https://www.encodeproject.org/files/ENCFF431SYT/@@download/ENCFF431SYT.bigWig hg19 released borderline replicate concordance ENCFF711XPS bigWig signal p-value ENCSR567JEU ChIP-seq EFO:0002067 K562 cell line Homo sapiens YBX3-human ENCAB021IRD DNA False 2016-09-01 ENCODE 1, 2 ENCFF051LWI, ENCFF072EMM, ENCFF581KEJ, ENCFF581ZJL 2027931681 ENCODE Processing Pipeline 95ff92df2b105674a6767e5ef35a38f8 https://www.encodeproject.org/files/ENCFF711XPS/@@download/ENCFF711XPS.bigWig hg19 released borderline replicate concordance ENCFF522KBD bigWig fold change over control ENCSR567JEU ChIP-seq EFO:0002067 K562 cell line Homo sapiens YBX3-human ENCAB021IRD DNA False 2016-09-01 ENCODE 1 ENCFF072EMM, ENCFF581ZJL 1207093166 ENCODE Processing Pipeline 9cb498bdafa073da934f065cd8d93132 https://www.encodeproject.org/files/ENCFF522KBD/@@download/ENCFF522KBD.bigWig hg19 released borderline replicate concordance ENCFF762QKT bigWig fold change over control ENCSR567JEU ChIP-seq EFO:0002067 K562 cell line Homo sapiens YBX3-human ENCAB021IRD DNA False 2016-09-01 ENCODE 2 ENCFF051LWI, ENCFF581KEJ 1235859010 ENCODE Processing Pipeline d10b007cd0063810a690b7ec84b308fb https://www.encodeproject.org/files/ENCFF762QKT/@@download/ENCFF762QKT.bigWig hg19 released borderline replicate concordance ENCFF889PGD bigWig fold change over control ENCSR567JEU ChIP-seq EFO:0002067 K562 cell line Homo sapiens YBX3-human ENCAB021IRD DNA False 2016-09-01 ENCODE 1, 2 ENCFF051LWI, ENCFF072EMM, ENCFF581KEJ, ENCFF581ZJL 2190283184 ENCODE Processing Pipeline 940023d38e8fb09cc1bf7576bc106004 https://www.encodeproject.org/files/ENCFF889PGD/@@download/ENCFF889PGD.bigWig hg19 released borderline replicate concordance ENCFF214PFV bed narrowPeak peaks ENCSR567JEU ChIP-seq EFO:0002067 K562 cell line Homo sapiens YBX3-human ENCAB021IRD DNA False 2016-09-01 ENCODE 1 ENCFF072EMM, ENCFF581ZJL 6498662 ENCODE Processing Pipeline 3f11270a3c900c60b30b8dba11743b2a https://www.encodeproject.org/files/ENCFF214PFV/@@download/ENCFF214PFV.bed.gz hg19 released borderline replicate concordance ENCFF277IZH bed narrowPeak peaks ENCSR567JEU ChIP-seq EFO:0002067 K562 cell line Homo sapiens YBX3-human ENCAB021IRD DNA False 2016-09-01 ENCODE 2 ENCFF051LWI, ENCFF581KEJ 6638468 ENCODE Processing Pipeline 36d9bfe21968a5410a8c3ac308937f8d https://www.encodeproject.org/files/ENCFF277IZH/@@download/ENCFF277IZH.bed.gz hg19 released borderline replicate concordance ENCFF898TYH bed narrowPeak peaks ENCSR567JEU ChIP-seq EFO:0002067 K562 cell line Homo sapiens YBX3-human ENCAB021IRD DNA False 2016-09-01 ENCODE 1, 2 ENCFF051LWI, ENCFF072EMM, ENCFF581KEJ, ENCFF581ZJL 7171522 ENCODE Processing Pipeline 70feaec10f89eef19f742fbc30a0c91b https://www.encodeproject.org/files/ENCFF898TYH/@@download/ENCFF898TYH.bed.gz hg19 released borderline replicate concordance ENCFF972CDY bigBed narrowPeak peaks ENCSR567JEU ChIP-seq EFO:0002067 K562 cell line Homo sapiens YBX3-human ENCAB021IRD DNA False 2016-09-01 ENCODE 1 ENCFF214PFV 11129903 ENCODE Processing Pipeline 1bd1602b19808eb16b007573f9ee6250 https://www.encodeproject.org/files/ENCFF972CDY/@@download/ENCFF972CDY.bigBed hg19 released borderline replicate concordance ENCFF753WYI bigBed narrowPeak peaks ENCSR567JEU ChIP-seq EFO:0002067 K562 cell line Homo sapiens YBX3-human ENCAB021IRD DNA False 2016-09-01 ENCODE 2 ENCFF277IZH 11007196 ENCODE Processing Pipeline fc3e5985bb886e0bc52ce0b8a3e62304 https://www.encodeproject.org/files/ENCFF753WYI/@@download/ENCFF753WYI.bigBed hg19 released borderline replicate concordance ENCFF300XAN bed narrowPeak conservative idr thresholded peaks ENCSR567JEU ChIP-seq EFO:0002067 K562 cell line Homo sapiens YBX3-human ENCAB021IRD DNA False 2016-09-01 ENCODE 1, 2 ENCFF001TDO, ENCFF214PFV, ENCFF277IZH, ENCFF898TYH 22178 ENCODE Processing Pipeline 66e09f01191216e74310e8f01ff790e2 https://www.encodeproject.org/files/ENCFF300XAN/@@download/ENCFF300XAN.bed.gz hg19 released borderline replicate concordance ENCFF671AFL bigBed narrowPeak peaks ENCSR567JEU ChIP-seq EFO:0002067 K562 cell line Homo sapiens YBX3-human ENCAB021IRD DNA False 2016-09-01 ENCODE 1, 2 ENCFF898TYH 10938016 ENCODE Processing Pipeline 5ff97500c04fbe63b08563bed1c0ff65 https://www.encodeproject.org/files/ENCFF671AFL/@@download/ENCFF671AFL.bigBed hg19 released borderline replicate concordance ENCFF803RBG bigBed narrowPeak conservative idr thresholded peaks ENCSR567JEU ChIP-seq EFO:0002067 K562 cell line Homo sapiens YBX3-human ENCAB021IRD DNA False 2016-09-01 ENCODE 1, 2 ENCFF300XAN 90632 ENCODE Processing Pipeline a49be6b60de9bccb98a1a20c88fc6a3c https://www.encodeproject.org/files/ENCFF803RBG/@@download/ENCFF803RBG.bigBed hg19 released borderline replicate concordance ENCFF246HIU bed narrowPeak optimal idr thresholded peaks ENCSR567JEU ChIP-seq EFO:0002067 K562 cell line Homo sapiens YBX3-human ENCAB021IRD DNA False 2016-09-01 ENCODE 1, 2 ENCFF001TDO, ENCFF214PFV, ENCFF277IZH, ENCFF898TYH 51934 ENCODE Processing Pipeline 93b69ccf7b369f691b390eff17a17422 https://www.encodeproject.org/files/ENCFF246HIU/@@download/ENCFF246HIU.bed.gz hg19 released borderline replicate concordance ENCFF778NRA bigBed narrowPeak optimal idr thresholded peaks ENCSR567JEU ChIP-seq EFO:0002067 K562 cell line Homo sapiens YBX3-human ENCAB021IRD DNA False 2016-09-01 ENCODE 1, 2 ENCFF246HIU 158794 ENCODE Processing Pipeline 1a8c7ba7084b90abd5db60a628618a38 https://www.encodeproject.org/files/ENCFF778NRA/@@download/ENCFF778NRA.bigBed hg19 released borderline replicate concordance ENCFF887DZF bam unfiltered alignments ENCSR567JEU ChIP-seq EFO:0002067 K562 cell line Homo sapiens YBX3-human ENCAB021IRD DNA False 2016-09-01 ENCODE 1 100 ENCFF276AYD, ENCFF519SRC, ENCFF643CGH 5320730645 ENCODE Processing Pipeline 4c7c1aaf93a3ad26cc66da8cc9ff7168 https://www.encodeproject.org/files/ENCFF887DZF/@@download/ENCFF887DZF.bam GRCh38 released borderline replicate concordance ENCFF416CRZ bam unfiltered alignments ENCSR567JEU ChIP-seq EFO:0002067 K562 cell line Homo sapiens YBX3-human ENCAB021IRD DNA False 2016-09-01 ENCODE 2 100 ENCFF504AIH, ENCFF590TAH, ENCFF643CGH 5741055157 ENCODE Processing Pipeline 223ef2ed5399d1754202ff776aeb9a09 https://www.encodeproject.org/files/ENCFF416CRZ/@@download/ENCFF416CRZ.bam GRCh38 released borderline replicate concordance ENCFF954HWS bam alignments ENCSR567JEU ChIP-seq EFO:0002067 K562 cell line Homo sapiens YBX3-human ENCAB021IRD DNA False 2016-09-01 ENCODE 1 100 ENCFF276AYD, ENCFF519SRC, ENCFF643CGH 4327733273 ENCODE Processing Pipeline 4ebdd43bf31a11b4144d18352c731b8e https://www.encodeproject.org/files/ENCFF954HWS/@@download/ENCFF954HWS.bam GRCh38 released borderline replicate concordance ENCFF124RUL bam alignments ENCSR567JEU ChIP-seq EFO:0002067 K562 cell line Homo sapiens YBX3-human ENCAB021IRD DNA False 2016-09-01 ENCODE 2 100 ENCFF504AIH, ENCFF590TAH, ENCFF643CGH 5004185476 ENCODE Processing Pipeline f11feae795ee1f8be63145b6f88f0ae5 https://www.encodeproject.org/files/ENCFF124RUL/@@download/ENCFF124RUL.bam GRCh38 released borderline replicate concordance ENCFF445GBD bigWig signal p-value ENCSR567JEU ChIP-seq EFO:0002067 K562 cell line Homo sapiens YBX3-human ENCAB021IRD DNA False 2016-09-01 ENCODE 1 ENCFF910IKB, ENCFF954HWS 1076235241 ENCODE Processing Pipeline 7138fbe04a0791cf3fdb970d3bac4ef5 https://www.encodeproject.org/files/ENCFF445GBD/@@download/ENCFF445GBD.bigWig GRCh38 released borderline replicate concordance ENCFF079WIO bigWig signal p-value ENCSR567JEU ChIP-seq EFO:0002067 K562 cell line Homo sapiens YBX3-human ENCAB021IRD DNA False 2016-09-01 ENCODE 2 ENCFF124RUL, ENCFF227IZS 975338167 ENCODE Processing Pipeline 24de819f695bec25c4528e8dfb237515 https://www.encodeproject.org/files/ENCFF079WIO/@@download/ENCFF079WIO.bigWig GRCh38 released borderline replicate concordance ENCFF775ZKB bigWig signal p-value ENCSR567JEU ChIP-seq EFO:0002067 K562 cell line Homo sapiens YBX3-human ENCAB021IRD DNA False 2016-09-01 ENCODE 1, 2 ENCFF124RUL, ENCFF227IZS, ENCFF910IKB, ENCFF954HWS 1820335169 ENCODE Processing Pipeline 97ca1d0c116a5e3230535e66aa7c4de6 https://www.encodeproject.org/files/ENCFF775ZKB/@@download/ENCFF775ZKB.bigWig GRCh38 released borderline replicate concordance ENCFF940WKD bigWig fold change over control ENCSR567JEU ChIP-seq EFO:0002067 K562 cell line Homo sapiens YBX3-human ENCAB021IRD DNA False 2016-09-01 ENCODE 1 ENCFF910IKB, ENCFF954HWS 1207629693 ENCODE Processing Pipeline 3bc69588c8d1700691b2073ba2e96f1e https://www.encodeproject.org/files/ENCFF940WKD/@@download/ENCFF940WKD.bigWig GRCh38 released borderline replicate concordance ENCFF778UYZ bigWig fold change over control ENCSR567JEU ChIP-seq EFO:0002067 K562 cell line Homo sapiens YBX3-human ENCAB021IRD DNA False 2016-09-01 ENCODE 2 ENCFF124RUL, ENCFF227IZS 1236618609 ENCODE Processing Pipeline cc7ae71d98eefc35f2330caa256561f8 https://www.encodeproject.org/files/ENCFF778UYZ/@@download/ENCFF778UYZ.bigWig GRCh38 released borderline replicate concordance ENCFF321FEG bigWig fold change over control ENCSR567JEU ChIP-seq EFO:0002067 K562 cell line Homo sapiens YBX3-human ENCAB021IRD DNA False 2016-09-01 ENCODE 1, 2 ENCFF124RUL, ENCFF227IZS, ENCFF910IKB, ENCFF954HWS 2207783603 ENCODE Processing Pipeline 14d7b61f1e70cd1f0a6b4bd9c5ce328c https://www.encodeproject.org/files/ENCFF321FEG/@@download/ENCFF321FEG.bigWig GRCh38 released borderline replicate concordance ENCFF145WPK bigBed narrowPeak peaks ENCSR567JEU ChIP-seq EFO:0002067 K562 cell line Homo sapiens YBX3-human ENCAB021IRD DNA False 2016-09-01 ENCODE 1, 2 ENCFF880DLB 10941179 ENCODE Processing Pipeline 2fb305d713650356403b0b0ec5ed4ed0 https://www.encodeproject.org/files/ENCFF145WPK/@@download/ENCFF145WPK.bigBed GRCh38 released borderline replicate concordance ENCFF852FJH bed narrowPeak peaks ENCSR567JEU ChIP-seq EFO:0002067 K562 cell line Homo sapiens YBX3-human ENCAB021IRD DNA False 2016-09-01 ENCODE 1 ENCFF910IKB, ENCFF954HWS 6427346 ENCODE Processing Pipeline 049ddc36c11ec20e75db3a609b515621 https://www.encodeproject.org/files/ENCFF852FJH/@@download/ENCFF852FJH.bed.gz GRCh38 released borderline replicate concordance ENCFF352JXW bigBed narrowPeak peaks ENCSR567JEU ChIP-seq EFO:0002067 K562 cell line Homo sapiens YBX3-human ENCAB021IRD DNA False 2016-09-01 ENCODE 2 ENCFF728DGC 11016124 ENCODE Processing Pipeline 0ebbbcf58c943fdfe4bc4010ed22e5be https://www.encodeproject.org/files/ENCFF352JXW/@@download/ENCFF352JXW.bigBed GRCh38 released borderline replicate concordance ENCFF728DGC bed narrowPeak peaks ENCSR567JEU ChIP-seq EFO:0002067 K562 cell line Homo sapiens YBX3-human ENCAB021IRD DNA False 2016-09-01 ENCODE 2 ENCFF124RUL, ENCFF227IZS 6514718 ENCODE Processing Pipeline 1899c3c43f1c1fc7c67a9fe7bab302d4 https://www.encodeproject.org/files/ENCFF728DGC/@@download/ENCFF728DGC.bed.gz GRCh38 released borderline replicate concordance ENCFF880DLB bed narrowPeak peaks ENCSR567JEU ChIP-seq EFO:0002067 K562 cell line Homo sapiens YBX3-human ENCAB021IRD DNA False 2016-09-01 ENCODE 1, 2 ENCFF124RUL, ENCFF227IZS, ENCFF910IKB, ENCFF954HWS 7152682 ENCODE Processing Pipeline bc4dc45465b4b32244095fbd4219a2bc https://www.encodeproject.org/files/ENCFF880DLB/@@download/ENCFF880DLB.bed.gz GRCh38 released borderline replicate concordance ENCFF604QCF bigBed narrowPeak conservative idr thresholded peaks ENCSR567JEU ChIP-seq EFO:0002067 K562 cell line Homo sapiens YBX3-human ENCAB021IRD DNA False 2016-09-01 ENCODE 1, 2 ENCFF964DVU 92435 ENCODE Processing Pipeline f8959a9fde618c4f5173360d3d44d711 https://www.encodeproject.org/files/ENCFF604QCF/@@download/ENCFF604QCF.bigBed GRCh38 released borderline replicate concordance ENCFF654OZU bigBed narrowPeak peaks ENCSR567JEU ChIP-seq EFO:0002067 K562 cell line Homo sapiens YBX3-human ENCAB021IRD DNA False 2016-09-01 ENCODE 1 ENCFF852FJH 11129244 ENCODE Processing Pipeline 3dfdf0877242d0f9c611576b03695e83 https://www.encodeproject.org/files/ENCFF654OZU/@@download/ENCFF654OZU.bigBed GRCh38 released borderline replicate concordance ENCFF964DVU bed narrowPeak conservative idr thresholded peaks ENCSR567JEU ChIP-seq EFO:0002067 K562 cell line Homo sapiens YBX3-human ENCAB021IRD DNA False 2016-09-01 ENCODE 1, 2 ENCFF419RSJ, ENCFF728DGC, ENCFF852FJH, ENCFF880DLB 22607 ENCODE Processing Pipeline 0ef49881d14780b79b49be1c3596031d https://www.encodeproject.org/files/ENCFF964DVU/@@download/ENCFF964DVU.bed.gz GRCh38 released borderline replicate concordance ENCFF224UCI bigBed narrowPeak optimal idr thresholded peaks ENCSR567JEU ChIP-seq EFO:0002067 K562 cell line Homo sapiens YBX3-human ENCAB021IRD DNA False 2016-09-01 ENCODE 1, 2 ENCFF508WCC 163747 ENCODE Processing Pipeline 92806970a4985685f98c5a527c914c06 https://www.encodeproject.org/files/ENCFF224UCI/@@download/ENCFF224UCI.bigBed GRCh38 released borderline replicate concordance ENCFF508WCC bed narrowPeak optimal idr thresholded peaks ENCSR567JEU ChIP-seq EFO:0002067 K562 cell line Homo sapiens YBX3-human ENCAB021IRD DNA False 2016-09-01 ENCODE 1, 2 ENCFF419RSJ, ENCFF728DGC, ENCFF852FJH, ENCFF880DLB 54121 ENCODE Processing Pipeline aab7dd8e8aff59499adaa07c77c9ba55 https://www.encodeproject.org/files/ENCFF508WCC/@@download/ENCFF508WCC.bed.gz GRCh38 released borderline replicate concordance ENCFF271YWH bam unfiltered alignments ENCSR178NTX ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CUX1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 50 ENCFF197WLE, ENCFF320OTV, ENCFF807MUK 1400874933 ENCODE Processing Pipeline 49ea5a1b585d1606e1e88fe512446733 https://www.encodeproject.org/files/ENCFF271YWH/@@download/ENCFF271YWH.bam hg19 released control low read depth, missing genetic modification characterization ENCFF368YOV bam unfiltered alignments ENCSR178NTX ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CUX1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 50 ENCFF494KWC, ENCFF807MUK, ENCFF826QKF 1244681194 ENCODE Processing Pipeline 22683f2dc79ce88028a0ecc01e53cfe6 https://www.encodeproject.org/files/ENCFF368YOV/@@download/ENCFF368YOV.bam hg19 released control low read depth, missing genetic modification characterization ENCFF494KWC fastq reads ENCSR178NTX ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CUX1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 1 50 single-ended 371897175 Kevin White, UChicago b07dcd053cc67cc824926c5234044209 SRA:SRR6212917 https://www.encodeproject.org/files/ENCFF494KWC/@@download/ENCFF494KWC.fastq.gz Illumina HiSeq 2500 /files/ENCFF838XWS/ released control low read depth, missing genetic modification characterization ENCFF197WLE fastq reads ENCSR178NTX ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CUX1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 1 50 single-ended 472605334 Kevin White, UChicago 04c6424b7ff5304d346ec58c91005a3b SRA:SRR6212915 https://www.encodeproject.org/files/ENCFF197WLE/@@download/ENCFF197WLE.fastq.gz Illumina HiSeq 2500 /files/ENCFF838XWS/ released control low read depth, missing genetic modification characterization ENCFF826QKF fastq reads ENCSR178NTX ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CUX1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 1 50 single-ended 742513811 Kevin White, UChicago 1ce75266cb6af1d2276eea2fa68b82d7 SRA:SRR6212918 https://www.encodeproject.org/files/ENCFF826QKF/@@download/ENCFF826QKF.fastq.gz Illumina HiSeq 2500 /files/ENCFF838XWS/ released control low read depth, missing genetic modification characterization ENCFF320OTV fastq reads ENCSR178NTX ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CUX1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 1 50 single-ended 770838468 Kevin White, UChicago f2c71ec20948c6480ba37bd5c122b9a3 SRA:SRR6212916 https://www.encodeproject.org/files/ENCFF320OTV/@@download/ENCFF320OTV.fastq.gz Illumina HiSeq 2500 /files/ENCFF838XWS/ released control low read depth, missing genetic modification characterization ENCFF107DVQ bam alignments ENCSR178NTX ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CUX1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 50 ENCFF494KWC, ENCFF807MUK, ENCFF826QKF 959918153 ENCODE Processing Pipeline 598545f9ea0cc5eb9c2a3b149ed4a013 https://www.encodeproject.org/files/ENCFF107DVQ/@@download/ENCFF107DVQ.bam hg19 released control low read depth, missing genetic modification characterization ENCFF121MMO bam alignments ENCSR178NTX ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CUX1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 50 ENCFF197WLE, ENCFF320OTV, ENCFF807MUK 1097225865 ENCODE Processing Pipeline c7218d78fffe1a45482059cf566987b5 https://www.encodeproject.org/files/ENCFF121MMO/@@download/ENCFF121MMO.bam hg19 released control low read depth, missing genetic modification characterization ENCFF795RZC bigWig signal p-value ENCSR178NTX ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CUX1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF107DVQ, ENCFF951BLJ 421581921 ENCODE Processing Pipeline 79719573d431aa3f965774f089fc415c https://www.encodeproject.org/files/ENCFF795RZC/@@download/ENCFF795RZC.bigWig hg19 released control low read depth, missing genetic modification characterization ENCFF904IPO bigWig signal p-value ENCSR178NTX ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CUX1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF121MMO, ENCFF951BLJ 456776130 ENCODE Processing Pipeline 018584e45fd158da496416b527bcb311 https://www.encodeproject.org/files/ENCFF904IPO/@@download/ENCFF904IPO.bigWig hg19 released control low read depth, missing genetic modification characterization ENCFF135DHK bigWig fold change over control ENCSR178NTX ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CUX1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF121MMO, ENCFF951BLJ 468300768 ENCODE Processing Pipeline 8cb722d41c01291841aa292297daa8f8 https://www.encodeproject.org/files/ENCFF135DHK/@@download/ENCFF135DHK.bigWig hg19 released control low read depth, missing genetic modification characterization ENCFF912HUI bigWig signal p-value ENCSR178NTX ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CUX1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF107DVQ, ENCFF121MMO, ENCFF951BLJ 419222309 ENCODE Processing Pipeline ac17c0cafcaad4c2f10669ab09214312 https://www.encodeproject.org/files/ENCFF912HUI/@@download/ENCFF912HUI.bigWig hg19 released control low read depth, missing genetic modification characterization ENCFF769QZE bigWig fold change over control ENCSR178NTX ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CUX1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF107DVQ, ENCFF121MMO, ENCFF951BLJ 712953870 ENCODE Processing Pipeline fdda111d061e0f5870130554729f44d3 https://www.encodeproject.org/files/ENCFF769QZE/@@download/ENCFF769QZE.bigWig hg19 released control low read depth, missing genetic modification characterization ENCFF578QVH bigWig fold change over control ENCSR178NTX ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CUX1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF107DVQ, ENCFF951BLJ 423647080 ENCODE Processing Pipeline c06daa76cea1d8e660c72c7c8a5d124e https://www.encodeproject.org/files/ENCFF578QVH/@@download/ENCFF578QVH.bigWig hg19 released control low read depth, missing genetic modification characterization ENCFF010BGE bed narrowPeak peaks ENCSR178NTX ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CUX1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF121MMO, ENCFF951BLJ 6256959 ENCODE Processing Pipeline 9b284f55a568bf23aa152ea8203a265a https://www.encodeproject.org/files/ENCFF010BGE/@@download/ENCFF010BGE.bed.gz hg19 released control low read depth, missing genetic modification characterization ENCFF364SQI bigBed narrowPeak peaks ENCSR178NTX ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CUX1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF010BGE 13038413 ENCODE Processing Pipeline 8c86a97bf3bb3882038f94619ed050a2 https://www.encodeproject.org/files/ENCFF364SQI/@@download/ENCFF364SQI.bigBed hg19 released control low read depth, missing genetic modification characterization ENCFF758WOZ bed narrowPeak peaks ENCSR178NTX ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CUX1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF107DVQ, ENCFF121MMO, ENCFF951BLJ 6694983 ENCODE Processing Pipeline 107d4f48915dc6bd8f07d9fa97464d78 https://www.encodeproject.org/files/ENCFF758WOZ/@@download/ENCFF758WOZ.bed.gz hg19 released control low read depth, missing genetic modification characterization ENCFF813QPT bed narrowPeak peaks ENCSR178NTX ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CUX1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF107DVQ, ENCFF951BLJ 6170472 ENCODE Processing Pipeline 4d42ef9f5b09bb4ed91ffe708bb6f317 https://www.encodeproject.org/files/ENCFF813QPT/@@download/ENCFF813QPT.bed.gz hg19 released control low read depth, missing genetic modification characterization ENCFF888EUI bigBed narrowPeak peaks ENCSR178NTX ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CUX1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF758WOZ 12807434 ENCODE Processing Pipeline 6c361a1ef16a890585d2c4f561797efa https://www.encodeproject.org/files/ENCFF888EUI/@@download/ENCFF888EUI.bigBed hg19 released control low read depth, missing genetic modification characterization ENCFF631VJI bigBed narrowPeak peaks ENCSR178NTX ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CUX1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF813QPT 13074654 ENCODE Processing Pipeline 553f6e93c9d0f9615d9e7a0a681b6136 https://www.encodeproject.org/files/ENCFF631VJI/@@download/ENCFF631VJI.bigBed hg19 released control low read depth, missing genetic modification characterization ENCFF012WGB bam unfiltered alignments ENCSR178NTX ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CUX1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 50 ENCFF197WLE, ENCFF320OTV, ENCFF643CGH 1407490188 ENCODE Processing Pipeline bdab2f6bec9f4b90ff8a29a1ea7eb9f1 https://www.encodeproject.org/files/ENCFF012WGB/@@download/ENCFF012WGB.bam GRCh38 released control low read depth, missing genetic modification characterization ENCFF098YSL bam unfiltered alignments ENCSR178NTX ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CUX1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 50 ENCFF494KWC, ENCFF643CGH, ENCFF826QKF 1249529542 ENCODE Processing Pipeline e3ded5e9efd724d77cb3a1d36d43cbd4 https://www.encodeproject.org/files/ENCFF098YSL/@@download/ENCFF098YSL.bam GRCh38 released control low read depth, missing genetic modification characterization ENCFF589UVV bam alignments ENCSR178NTX ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CUX1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 50 ENCFF197WLE, ENCFF320OTV, ENCFF643CGH 1096748832 ENCODE Processing Pipeline a9fcc96c0b62ccf20ed267cce16daae0 https://www.encodeproject.org/files/ENCFF589UVV/@@download/ENCFF589UVV.bam GRCh38 released control low read depth, missing genetic modification characterization ENCFF060WJH bam alignments ENCSR178NTX ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CUX1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 50 ENCFF494KWC, ENCFF643CGH, ENCFF826QKF 959471091 ENCODE Processing Pipeline eb4e3abed1fd9fd12eef0567dfc48baf https://www.encodeproject.org/files/ENCFF060WJH/@@download/ENCFF060WJH.bam GRCh38 released control low read depth, missing genetic modification characterization ENCFF051GPS bigWig signal p-value ENCSR178NTX ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CUX1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF060WJH, ENCFF322EZT 421115538 ENCODE Processing Pipeline dbcb7b8e59a4afbca50c4b4dd33bd993 https://www.encodeproject.org/files/ENCFF051GPS/@@download/ENCFF051GPS.bigWig GRCh38 released control low read depth, missing genetic modification characterization ENCFF893ZTX bigWig signal p-value ENCSR178NTX ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CUX1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF060WJH, ENCFF322EZT, ENCFF589UVV 428728630 ENCODE Processing Pipeline 0e967c5c3303a1d03cecf34a98913d4c https://www.encodeproject.org/files/ENCFF893ZTX/@@download/ENCFF893ZTX.bigWig GRCh38 released control low read depth, missing genetic modification characterization ENCFF106FBD bigWig signal p-value ENCSR178NTX ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CUX1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF322EZT, ENCFF589UVV 456905963 ENCODE Processing Pipeline c5408667f153466b3e2d1ccab048b995 https://www.encodeproject.org/files/ENCFF106FBD/@@download/ENCFF106FBD.bigWig GRCh38 released control low read depth, missing genetic modification characterization ENCFF501NLR bigWig fold change over control ENCSR178NTX ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CUX1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF322EZT, ENCFF589UVV 468394824 ENCODE Processing Pipeline f9dc7405918073c7e20d7ad9a42ddd7f https://www.encodeproject.org/files/ENCFF501NLR/@@download/ENCFF501NLR.bigWig GRCh38 released control low read depth, missing genetic modification characterization ENCFF750FXL bigWig fold change over control ENCSR178NTX ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CUX1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF060WJH, ENCFF322EZT 419953857 ENCODE Processing Pipeline 9ae9e6e2a8686aa9ef211fec9f73ab2d https://www.encodeproject.org/files/ENCFF750FXL/@@download/ENCFF750FXL.bigWig GRCh38 released control low read depth, missing genetic modification characterization ENCFF897IOX bigWig fold change over control ENCSR178NTX ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CUX1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF060WJH, ENCFF322EZT, ENCFF589UVV 723392990 ENCODE Processing Pipeline b9b91621f5b2a88385ea889a93f39d83 https://www.encodeproject.org/files/ENCFF897IOX/@@download/ENCFF897IOX.bigWig GRCh38 released control low read depth, missing genetic modification characterization ENCFF415OJD bed narrowPeak peaks ENCSR178NTX ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CUX1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF060WJH, ENCFF322EZT 5840560 ENCODE Processing Pipeline 888f8eaafd33a1c952ea953660c91eb0 https://www.encodeproject.org/files/ENCFF415OJD/@@download/ENCFF415OJD.bed.gz GRCh38 released control low read depth, missing genetic modification characterization ENCFF784YPB bed narrowPeak peaks ENCSR178NTX ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CUX1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF322EZT, ENCFF589UVV 5930672 ENCODE Processing Pipeline 94db2b8e35b7a93691af28503050c860 https://www.encodeproject.org/files/ENCFF784YPB/@@download/ENCFF784YPB.bed.gz GRCh38 released control low read depth, missing genetic modification characterization ENCFF169EQA bigBed narrowPeak peaks ENCSR178NTX ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CUX1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF784YPB 13032421 ENCODE Processing Pipeline 2b47d7ceda2a8070964c8c4e799043b2 https://www.encodeproject.org/files/ENCFF169EQA/@@download/ENCFF169EQA.bigBed GRCh38 released control low read depth, missing genetic modification characterization ENCFF635HBX bigBed narrowPeak peaks ENCSR178NTX ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CUX1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF415OJD 13069982 ENCODE Processing Pipeline 225717354b1e12947b5ac6b879c37a58 https://www.encodeproject.org/files/ENCFF635HBX/@@download/ENCFF635HBX.bigBed GRCh38 released control low read depth, missing genetic modification characterization ENCFF600ROI bed narrowPeak peaks ENCSR178NTX ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CUX1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF060WJH, ENCFF322EZT, ENCFF589UVV 6470516 ENCODE Processing Pipeline aa321ed0fce3bebf036b4ba8b5e7063e https://www.encodeproject.org/files/ENCFF600ROI/@@download/ENCFF600ROI.bed.gz GRCh38 released control low read depth, missing genetic modification characterization ENCFF834DYD bed narrowPeak conservative idr thresholded peaks ENCSR178NTX ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CUX1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF415OJD, ENCFF419RSJ, ENCFF600ROI, ENCFF784YPB 130470 ENCODE Processing Pipeline f83c01e48d1a2b8c0230d9bc25eaf31b https://www.encodeproject.org/files/ENCFF834DYD/@@download/ENCFF834DYD.bed.gz GRCh38 released control low read depth, missing genetic modification characterization ENCFF697RVN bigBed narrowPeak conservative idr thresholded peaks ENCSR178NTX ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CUX1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF834DYD 368616 ENCODE Processing Pipeline 72632c6f3a0f884d1d23fc6312bf08a6 https://www.encodeproject.org/files/ENCFF697RVN/@@download/ENCFF697RVN.bigBed GRCh38 released control low read depth, missing genetic modification characterization ENCFF082KHJ bed narrowPeak optimal idr thresholded peaks ENCSR178NTX ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CUX1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF415OJD, ENCFF419RSJ, ENCFF600ROI, ENCFF784YPB 134726 ENCODE Processing Pipeline 3b1111bf5ab82af96120034a079d77bd https://www.encodeproject.org/files/ENCFF082KHJ/@@download/ENCFF082KHJ.bed.gz GRCh38 released control low read depth, missing genetic modification characterization ENCFF364UJT bigBed narrowPeak peaks ENCSR178NTX ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CUX1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF600ROI 12826471 ENCODE Processing Pipeline 23cd3179529613035d0af1ead1d82d5d https://www.encodeproject.org/files/ENCFF364UJT/@@download/ENCFF364UJT.bigBed GRCh38 released control low read depth, missing genetic modification characterization ENCFF269RQQ bigBed narrowPeak optimal idr thresholded peaks ENCSR178NTX ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CUX1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF082KHJ 378012 ENCODE Processing Pipeline d30e11897afb514502b5f9a8c47e1e4c https://www.encodeproject.org/files/ENCFF269RQQ/@@download/ENCFF269RQQ.bigBed GRCh38 released control low read depth, missing genetic modification characterization ENCFF615DHV bigBed narrowPeak conservative idr thresholded peaks ENCSR178NTX ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CUX1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF193JMA 229684 ENCODE Processing Pipeline 4cf9fdd390359411ab8907f0cc145da8 https://www.encodeproject.org/files/ENCFF615DHV/@@download/ENCFF615DHV.bigBed hg19 released control low read depth, missing genetic modification characterization ENCFF526PFS bigBed narrowPeak optimal idr thresholded peaks ENCSR178NTX ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CUX1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF695CPH 237417 ENCODE Processing Pipeline 8a63a316a9517ceb83d38258b2da002b https://www.encodeproject.org/files/ENCFF526PFS/@@download/ENCFF526PFS.bigBed hg19 released control low read depth, missing genetic modification characterization ENCFF193JMA bed narrowPeak conservative idr thresholded peaks ENCSR178NTX ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CUX1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF001TDO, ENCFF010BGE, ENCFF758WOZ, ENCFF813QPT 102641 ENCODE Processing Pipeline 12255b4dde9525ae83bc9ac4df57ba38 https://www.encodeproject.org/files/ENCFF193JMA/@@download/ENCFF193JMA.bed.gz hg19 released control low read depth, missing genetic modification characterization ENCFF695CPH bed narrowPeak optimal idr thresholded peaks ENCSR178NTX ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CUX1-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF001TDO, ENCFF010BGE, ENCFF758WOZ, ENCFF813QPT 108206 ENCODE Processing Pipeline 84c3f2ea4e6958d0b457e43c2470ec24 https://www.encodeproject.org/files/ENCFF695CPH/@@download/ENCFF695CPH.bed.gz hg19 released control low read depth, missing genetic modification characterization ENCFF501GVP fastq reads ENCSR699PVC ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBFA2T2-human ENCAB322DID DNA False 2017-09-28 ENCODE 1 1 100 paired-ended 1 ENCFF590GNR 3017998315 Michael Snyder, Stanford 093f5f3d70d6516fe0a119acc98f27d8 SRA:SRR6213829 https://www.encodeproject.org/files/ENCFF501GVP/@@download/ENCFF501GVP.fastq.gz Illumina HiSeq 2000 /files/ENCFF410PHD/ released mild to moderate bottlenecking ENCFF875MPK fastq reads ENCSR699PVC ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBFA2T2-human ENCAB322DID DNA False 2017-09-28 ENCODE 2 1 100 paired-ended 1 ENCFF477TYW 2293887246 Michael Snyder, Stanford c858bdd081cded111f027f9ec3f6aa88 SRA:SRR6213828 https://www.encodeproject.org/files/ENCFF875MPK/@@download/ENCFF875MPK.fastq.gz Illumina HiSeq 2000 /files/ENCFF240DTE/ released mild to moderate bottlenecking ENCFF477TYW fastq reads ENCSR699PVC ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBFA2T2-human ENCAB322DID DNA False 2017-09-28 ENCODE 2 1 100 paired-ended 2 ENCFF875MPK 2326090234 Michael Snyder, Stanford c2179d6db0e77a3cffcf2b1496cca7de SRA:SRR6213828 https://www.encodeproject.org/files/ENCFF477TYW/@@download/ENCFF477TYW.fastq.gz Illumina HiSeq 2000 /files/ENCFF608MDV/ released mild to moderate bottlenecking ENCFF590GNR fastq reads ENCSR699PVC ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBFA2T2-human ENCAB322DID DNA False 2017-09-28 ENCODE 1 1 100 paired-ended 2 ENCFF501GVP 3062510590 Michael Snyder, Stanford 3ea7ef1f4e3dcccbb087a80eb1663af3 SRA:SRR6213829 https://www.encodeproject.org/files/ENCFF590GNR/@@download/ENCFF590GNR.fastq.gz Illumina HiSeq 2000 /files/ENCFF368UOC/ released mild to moderate bottlenecking ENCFF816MDI bam unfiltered alignments ENCSR699PVC ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBFA2T2-human ENCAB322DID DNA False 2017-09-28 ENCODE 2 100 ENCFF477TYW, ENCFF643CGH, ENCFF875MPK 4947241575 ENCODE Processing Pipeline fb1e0ec08eca50928e8f8c743f00bdc5 https://www.encodeproject.org/files/ENCFF816MDI/@@download/ENCFF816MDI.bam GRCh38 released mild to moderate bottlenecking ENCFF045XLH bam unfiltered alignments ENCSR699PVC ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBFA2T2-human ENCAB322DID DNA False 2017-09-28 ENCODE 1 100 ENCFF501GVP, ENCFF590GNR, ENCFF643CGH 6429968323 ENCODE Processing Pipeline dbc292a85e35a44a5f3439d644090196 https://www.encodeproject.org/files/ENCFF045XLH/@@download/ENCFF045XLH.bam GRCh38 released mild to moderate bottlenecking ENCFF847WQB bam unfiltered alignments ENCSR699PVC ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBFA2T2-human ENCAB322DID DNA False 2017-09-28 ENCODE 2 100 ENCFF477TYW, ENCFF807MUK, ENCFF875MPK 4943176033 ENCODE Processing Pipeline 984c9847917b3b73c7c4bcd53645a260 https://www.encodeproject.org/files/ENCFF847WQB/@@download/ENCFF847WQB.bam hg19 released mild to moderate bottlenecking ENCFF860GRK bam alignments ENCSR699PVC ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBFA2T2-human ENCAB322DID DNA False 2017-09-28 ENCODE 2 100 ENCFF477TYW, ENCFF807MUK, ENCFF875MPK 3938035522 ENCODE Processing Pipeline 7b392fca049476ad3fd424e5c6352e96 https://www.encodeproject.org/files/ENCFF860GRK/@@download/ENCFF860GRK.bam hg19 released mild to moderate bottlenecking ENCFF772CXL bam unfiltered alignments ENCSR699PVC ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBFA2T2-human ENCAB322DID DNA False 2017-09-28 ENCODE 1 100 ENCFF501GVP, ENCFF590GNR, ENCFF807MUK 6424452637 ENCODE Processing Pipeline e835bf3089643114db9f33bbf448a65b https://www.encodeproject.org/files/ENCFF772CXL/@@download/ENCFF772CXL.bam hg19 released mild to moderate bottlenecking ENCFF670UAP bam alignments ENCSR699PVC ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBFA2T2-human ENCAB322DID DNA False 2017-09-28 ENCODE 2 100 ENCFF477TYW, ENCFF643CGH, ENCFF875MPK 3939726636 ENCODE Processing Pipeline 625f92ce431878cd1bf7694b0f2402cb https://www.encodeproject.org/files/ENCFF670UAP/@@download/ENCFF670UAP.bam GRCh38 released mild to moderate bottlenecking ENCFF207EXR bam alignments ENCSR699PVC ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBFA2T2-human ENCAB322DID DNA False 2017-09-28 ENCODE 1 100 ENCFF501GVP, ENCFF590GNR, ENCFF643CGH 5223935954 ENCODE Processing Pipeline 24b438290bd832ab3977a1bae6df1c06 https://www.encodeproject.org/files/ENCFF207EXR/@@download/ENCFF207EXR.bam GRCh38 released mild to moderate bottlenecking ENCFF100APY bam alignments ENCSR699PVC ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBFA2T2-human ENCAB322DID DNA False 2017-09-28 ENCODE 1 100 ENCFF501GVP, ENCFF590GNR, ENCFF807MUK 5221055577 ENCODE Processing Pipeline 09e816e2755557751b092d0030c16348 https://www.encodeproject.org/files/ENCFF100APY/@@download/ENCFF100APY.bam hg19 released mild to moderate bottlenecking ENCFF956UHF bigWig signal p-value ENCSR699PVC ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBFA2T2-human ENCAB322DID DNA False 2017-09-28 ENCODE 2 ENCFF262CJE, ENCFF506DFV, ENCFF860GRK 1199333446 ENCODE Processing Pipeline 79c1ca07d85aaf8a1263b0550adf377a https://www.encodeproject.org/files/ENCFF956UHF/@@download/ENCFF956UHF.bigWig hg19 released mild to moderate bottlenecking ENCFF398DKE bigWig fold change over control ENCSR699PVC ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBFA2T2-human ENCAB322DID DNA False 2017-09-28 ENCODE 1, 2 ENCFF100APY, ENCFF262CJE, ENCFF506DFV, ENCFF860GRK 1859539891 ENCODE Processing Pipeline cd35f300db1d3fc55c07d4b568470bc6 https://www.encodeproject.org/files/ENCFF398DKE/@@download/ENCFF398DKE.bigWig hg19 released mild to moderate bottlenecking ENCFF823EJT bigBed narrowPeak peaks ENCSR699PVC ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBFA2T2-human ENCAB322DID DNA False 2017-09-28 ENCODE 2 ENCFF723YNA 11450404 ENCODE Processing Pipeline 8db5bf9dd3e30631e7f6a1af811991b9 https://www.encodeproject.org/files/ENCFF823EJT/@@download/ENCFF823EJT.bigBed hg19 released mild to moderate bottlenecking ENCFF458KNY bigWig fold change over control ENCSR699PVC ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBFA2T2-human ENCAB322DID DNA False 2017-09-28 ENCODE 1 ENCFF100APY, ENCFF262CJE, ENCFF506DFV 1417744362 ENCODE Processing Pipeline 39e6e7424b9f9f3cbe21ccfda87d9148 https://www.encodeproject.org/files/ENCFF458KNY/@@download/ENCFF458KNY.bigWig hg19 released mild to moderate bottlenecking ENCFF681RAS bigWig fold change over control ENCSR699PVC ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBFA2T2-human ENCAB322DID DNA False 2017-09-28 ENCODE 2 ENCFF262CJE, ENCFF506DFV, ENCFF860GRK 1212963969 ENCODE Processing Pipeline f017dd238cf2eecda71f9181abc37287 https://www.encodeproject.org/files/ENCFF681RAS/@@download/ENCFF681RAS.bigWig hg19 released mild to moderate bottlenecking ENCFF746UJW bigWig signal p-value ENCSR699PVC ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBFA2T2-human ENCAB322DID DNA False 2017-09-28 ENCODE 1, 2 ENCFF100APY, ENCFF262CJE, ENCFF506DFV, ENCFF860GRK 1693251608 ENCODE Processing Pipeline a44168f07386673c45b51e2886853c86 https://www.encodeproject.org/files/ENCFF746UJW/@@download/ENCFF746UJW.bigWig hg19 released mild to moderate bottlenecking ENCFF723YNA bed narrowPeak peaks ENCSR699PVC ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBFA2T2-human ENCAB322DID DNA False 2017-09-28 ENCODE 2 ENCFF262CJE, ENCFF506DFV, ENCFF860GRK 6358841 ENCODE Processing Pipeline 71f148421e311b84398fd8449b30f078 https://www.encodeproject.org/files/ENCFF723YNA/@@download/ENCFF723YNA.bed.gz hg19 released mild to moderate bottlenecking ENCFF611MDD bigBed narrowPeak peaks ENCSR699PVC ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBFA2T2-human ENCAB322DID DNA False 2017-09-28 ENCODE 1, 2 ENCFF341FSC 11389118 ENCODE Processing Pipeline b640cd9208f303d8842a825067fa30a7 https://www.encodeproject.org/files/ENCFF611MDD/@@download/ENCFF611MDD.bigBed hg19 released mild to moderate bottlenecking ENCFF022ETM bigBed narrowPeak conservative idr thresholded peaks ENCSR699PVC ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBFA2T2-human ENCAB322DID DNA False 2017-09-28 ENCODE 1, 2 ENCFF339YXQ 1152357 ENCODE Processing Pipeline a48da1dd3b2d0ae6baa8e4cb428cb551 https://www.encodeproject.org/files/ENCFF022ETM/@@download/ENCFF022ETM.bigBed hg19 released mild to moderate bottlenecking ENCFF592ABS bigBed narrowPeak optimal idr thresholded peaks ENCSR699PVC ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBFA2T2-human ENCAB322DID DNA False 2017-09-28 ENCODE 1, 2 ENCFF642BNC 1216545 ENCODE Processing Pipeline ab8a51d809644035c9a3235dfc010693 https://www.encodeproject.org/files/ENCFF592ABS/@@download/ENCFF592ABS.bigBed hg19 released mild to moderate bottlenecking ENCFF806CKZ bigWig signal p-value ENCSR699PVC ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBFA2T2-human ENCAB322DID DNA False 2017-09-28 ENCODE 1 ENCFF100APY, ENCFF262CJE, ENCFF506DFV 1179278283 ENCODE Processing Pipeline 30f880f9bcbb05d4acd398e83248a6bd https://www.encodeproject.org/files/ENCFF806CKZ/@@download/ENCFF806CKZ.bigWig hg19 released mild to moderate bottlenecking ENCFF338XEA bigBed narrowPeak peaks ENCSR699PVC ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBFA2T2-human ENCAB322DID DNA False 2017-09-28 ENCODE 1 ENCFF866VBI 11392659 ENCODE Processing Pipeline 0a263b76cb3723aa32ab5417e566d52b https://www.encodeproject.org/files/ENCFF338XEA/@@download/ENCFF338XEA.bigBed hg19 released mild to moderate bottlenecking ENCFF339YXQ bed narrowPeak conservative idr thresholded peaks ENCSR699PVC ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBFA2T2-human ENCAB322DID DNA False 2017-09-28 ENCODE 1, 2 ENCFF001TDO, ENCFF341FSC, ENCFF723YNA, ENCFF866VBI 528680 ENCODE Processing Pipeline 465530fcb147810f3ba8c96e467899c4 https://www.encodeproject.org/files/ENCFF339YXQ/@@download/ENCFF339YXQ.bed.gz hg19 released mild to moderate bottlenecking ENCFF866VBI bed narrowPeak peaks ENCSR699PVC ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBFA2T2-human ENCAB322DID DNA False 2017-09-28 ENCODE 1 ENCFF100APY, ENCFF262CJE, ENCFF506DFV 6718826 ENCODE Processing Pipeline 462aff753a325d16f959eb396e6e026a https://www.encodeproject.org/files/ENCFF866VBI/@@download/ENCFF866VBI.bed.gz hg19 released mild to moderate bottlenecking ENCFF341FSC bed narrowPeak peaks ENCSR699PVC ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBFA2T2-human ENCAB322DID DNA False 2017-09-28 ENCODE 1, 2 ENCFF100APY, ENCFF262CJE, ENCFF506DFV, ENCFF860GRK 7087517 ENCODE Processing Pipeline 6048b745d886d6bb1a9cbeb7a355c4f1 https://www.encodeproject.org/files/ENCFF341FSC/@@download/ENCFF341FSC.bed.gz hg19 released mild to moderate bottlenecking ENCFF642BNC bed narrowPeak optimal idr thresholded peaks ENCSR699PVC ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBFA2T2-human ENCAB322DID DNA False 2017-09-28 ENCODE 1, 2 ENCFF001TDO, ENCFF341FSC, ENCFF723YNA, ENCFF866VBI 567549 ENCODE Processing Pipeline 9e6de62f30055b9cf52e5dfc02597efc https://www.encodeproject.org/files/ENCFF642BNC/@@download/ENCFF642BNC.bed.gz hg19 released mild to moderate bottlenecking ENCFF899FUT bigWig fold change over control ENCSR699PVC ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBFA2T2-human ENCAB322DID DNA False 2017-09-28 ENCODE 1 ENCFF207EXR, ENCFF720AUK, ENCFF796JTX 1419093111 ENCODE Processing Pipeline d6f6e21487ae42bc6e64e1a51072cd2f https://www.encodeproject.org/files/ENCFF899FUT/@@download/ENCFF899FUT.bigWig GRCh38 released mild to moderate bottlenecking ENCFF644WNC bigWig fold change over control ENCSR699PVC ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBFA2T2-human ENCAB322DID DNA False 2017-09-28 ENCODE 2 ENCFF670UAP, ENCFF720AUK, ENCFF796JTX 1211597766 ENCODE Processing Pipeline fd5cb09482987accda7ab973df4f60b0 https://www.encodeproject.org/files/ENCFF644WNC/@@download/ENCFF644WNC.bigWig GRCh38 released mild to moderate bottlenecking ENCFF119YZL bigWig fold change over control ENCSR699PVC ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBFA2T2-human ENCAB322DID DNA False 2017-09-28 ENCODE 1, 2 ENCFF207EXR, ENCFF670UAP, ENCFF720AUK, ENCFF796JTX 1858383625 ENCODE Processing Pipeline 789bf2ddc6f6f653897af87276396ec6 https://www.encodeproject.org/files/ENCFF119YZL/@@download/ENCFF119YZL.bigWig GRCh38 released mild to moderate bottlenecking ENCFF799ZWN bed narrowPeak peaks ENCSR699PVC ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBFA2T2-human ENCAB322DID DNA False 2017-09-28 ENCODE 1 ENCFF207EXR, ENCFF720AUK, ENCFF796JTX 6725027 ENCODE Processing Pipeline c740eb9a2ee8d6fd1c70e4cfac6819f4 https://www.encodeproject.org/files/ENCFF799ZWN/@@download/ENCFF799ZWN.bed.gz GRCh38 released mild to moderate bottlenecking ENCFF543TNH bigWig signal p-value ENCSR699PVC ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBFA2T2-human ENCAB322DID DNA False 2017-09-28 ENCODE 2 ENCFF670UAP, ENCFF720AUK, ENCFF796JTX 1222993366 ENCODE Processing Pipeline 252a7552c5af7b9a2c4b62517f745e69 https://www.encodeproject.org/files/ENCFF543TNH/@@download/ENCFF543TNH.bigWig GRCh38 released mild to moderate bottlenecking ENCFF155CSO bigWig signal p-value ENCSR699PVC ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBFA2T2-human ENCAB322DID DNA False 2017-09-28 ENCODE 1, 2 ENCFF207EXR, ENCFF670UAP, ENCFF720AUK, ENCFF796JTX 1790329127 ENCODE Processing Pipeline 163fc9c3d61ee62c95bbef6267e2b674 https://www.encodeproject.org/files/ENCFF155CSO/@@download/ENCFF155CSO.bigWig GRCh38 released mild to moderate bottlenecking ENCFF353QIM bigBed narrowPeak peaks ENCSR699PVC ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBFA2T2-human ENCAB322DID DNA False 2017-09-28 ENCODE 2 ENCFF996YFG 11470911 ENCODE Processing Pipeline e27a33a7ce31e86a0455d37ce14ac59e https://www.encodeproject.org/files/ENCFF353QIM/@@download/ENCFF353QIM.bigBed GRCh38 released mild to moderate bottlenecking ENCFF419PEK bed narrowPeak optimal idr thresholded peaks ENCSR699PVC ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBFA2T2-human ENCAB322DID DNA False 2017-09-28 ENCODE 1, 2 ENCFF343XSY, ENCFF419RSJ, ENCFF799ZWN, ENCFF996YFG 577689 ENCODE Processing Pipeline 1036123880424ff327044007f80a51a2 https://www.encodeproject.org/files/ENCFF419PEK/@@download/ENCFF419PEK.bed.gz GRCh38 released mild to moderate bottlenecking ENCFF317SWK bed narrowPeak conservative idr thresholded peaks ENCSR699PVC ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBFA2T2-human ENCAB322DID DNA False 2017-09-28 ENCODE 1, 2 ENCFF343XSY, ENCFF419RSJ, ENCFF799ZWN, ENCFF996YFG 530507 ENCODE Processing Pipeline baf2a3ec7f04c9fff9f2802d1231e58e https://www.encodeproject.org/files/ENCFF317SWK/@@download/ENCFF317SWK.bed.gz GRCh38 released mild to moderate bottlenecking ENCFF579NBB bigBed narrowPeak conservative idr thresholded peaks ENCSR699PVC ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBFA2T2-human ENCAB322DID DNA False 2017-09-28 ENCODE 1, 2 ENCFF317SWK 1157934 ENCODE Processing Pipeline 4ca1c5c6287656bcc8fe30f79e408a51 https://www.encodeproject.org/files/ENCFF579NBB/@@download/ENCFF579NBB.bigBed GRCh38 released mild to moderate bottlenecking ENCFF706LER bigBed narrowPeak optimal idr thresholded peaks ENCSR699PVC ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBFA2T2-human ENCAB322DID DNA False 2017-09-28 ENCODE 1, 2 ENCFF419PEK 1235291 ENCODE Processing Pipeline b38255c683ab99c5635cc3a6fe12f113 https://www.encodeproject.org/files/ENCFF706LER/@@download/ENCFF706LER.bigBed GRCh38 released mild to moderate bottlenecking ENCFF996YFG bed narrowPeak peaks ENCSR699PVC ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBFA2T2-human ENCAB322DID DNA False 2017-09-28 ENCODE 2 ENCFF670UAP, ENCFF720AUK, ENCFF796JTX 6362072 ENCODE Processing Pipeline 552e696122104ddc685dd10a7be5afbd https://www.encodeproject.org/files/ENCFF996YFG/@@download/ENCFF996YFG.bed.gz GRCh38 released mild to moderate bottlenecking ENCFF343XSY bed narrowPeak peaks ENCSR699PVC ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBFA2T2-human ENCAB322DID DNA False 2017-09-28 ENCODE 1, 2 ENCFF207EXR, ENCFF670UAP, ENCFF720AUK, ENCFF796JTX 7092036 ENCODE Processing Pipeline ef2a0f661f72f2954a5bd09342e6030d https://www.encodeproject.org/files/ENCFF343XSY/@@download/ENCFF343XSY.bed.gz GRCh38 released mild to moderate bottlenecking ENCFF349LEO bigBed narrowPeak peaks ENCSR699PVC ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBFA2T2-human ENCAB322DID DNA False 2017-09-28 ENCODE 1 ENCFF799ZWN 11411312 ENCODE Processing Pipeline 26610ff540fe06fdcc6729e73832378d https://www.encodeproject.org/files/ENCFF349LEO/@@download/ENCFF349LEO.bigBed GRCh38 released mild to moderate bottlenecking ENCFF914EDU bigBed narrowPeak peaks ENCSR699PVC ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBFA2T2-human ENCAB322DID DNA False 2017-09-28 ENCODE 1, 2 ENCFF343XSY 11406078 ENCODE Processing Pipeline ab8f344b5f809f9139c299e6472cfbed https://www.encodeproject.org/files/ENCFF914EDU/@@download/ENCFF914EDU.bigBed GRCh38 released mild to moderate bottlenecking ENCFF112PQF bigWig signal p-value ENCSR699PVC ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBFA2T2-human ENCAB322DID DNA False 2017-09-28 ENCODE 1 ENCFF207EXR, ENCFF720AUK, ENCFF796JTX 1262501191 ENCODE Processing Pipeline 3824f234cc466626d0c08e3c66aa4f34 https://www.encodeproject.org/files/ENCFF112PQF/@@download/ENCFF112PQF.bigWig GRCh38 released mild to moderate bottlenecking ENCFF434UEL bam unfiltered alignments ENCSR907JPB ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZMIZ1-human ENCAB000AMQ DNA False 2016-08-24 ENCODE 2 36 ENCFF002EWG, ENCFF807MUK 1203969862 ENCODE Processing Pipeline ffb87e31ee46e5a48a713e3424c72ead https://www.encodeproject.org/files/ENCFF434UEL/@@download/ENCFF434UEL.bam hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF615LBT bam unfiltered alignments ENCSR907JPB ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZMIZ1-human ENCAB000AMQ DNA False 2016-08-24 ENCODE 1 36 ENCFF002EWF, ENCFF807MUK 995129011 ENCODE Processing Pipeline de9a20284377b1640e99beaf34535494 https://www.encodeproject.org/files/ENCFF615LBT/@@download/ENCFF615LBT.bam hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF002EWF fastq reads ENCSR907JPB ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZMIZ1-human ENCAB000AMQ DNA False 2016-08-24 ENCODE 1 1 36 single-ended 842918646 Michael Snyder, Stanford 442370035d630e8a37997ff87d43e075 SRA:SRR5112271 https://www.encodeproject.org/files/ENCFF002EWF/@@download/ENCFF002EWF.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF002ECW/ released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF002EWG fastq reads ENCSR907JPB ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZMIZ1-human ENCAB000AMQ DNA False 2016-08-24 ENCODE 2 1 36 single-ended 1000439655 Michael Snyder, Stanford a85af88c7aeead3f1d5a2d3cd21c5632 SRA:SRR5112272 https://www.encodeproject.org/files/ENCFF002EWG/@@download/ENCFF002EWG.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF002ECS/ released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF621GUP bam alignments ENCSR907JPB ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZMIZ1-human ENCAB000AMQ DNA False 2016-08-24 ENCODE 2 ENCFF002EWG, ENCFF807MUK 782896574 ENCODE Processing Pipeline fdfe928eab43a8ed1923060998354902 https://www.encodeproject.org/files/ENCFF621GUP/@@download/ENCFF621GUP.bam hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF708LOC bam alignments ENCSR907JPB ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZMIZ1-human ENCAB000AMQ DNA False 2016-08-24 ENCODE 1 ENCFF002EWF, ENCFF807MUK 588455376 ENCODE Processing Pipeline f4a3889c1f863acac74a4bfb48cc77ba https://www.encodeproject.org/files/ENCFF708LOC/@@download/ENCFF708LOC.bam hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF364VIS bigWig signal p-value ENCSR907JPB ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZMIZ1-human ENCAB000AMQ DNA False 2016-08-24 ENCODE 1 ENCFF335IPE, ENCFF708LOC 597751208 ENCODE Processing Pipeline d35586a7e5e5f84050187de7fead98c0 https://www.encodeproject.org/files/ENCFF364VIS/@@download/ENCFF364VIS.bigWig hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF377WKS bigWig signal p-value ENCSR907JPB ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZMIZ1-human ENCAB000AMQ DNA False 2016-08-24 ENCODE 2 ENCFF621GUP, ENCFF879OQC 596342792 ENCODE Processing Pipeline ed0ce2abbc2957a5a5d6b129dfafdd56 https://www.encodeproject.org/files/ENCFF377WKS/@@download/ENCFF377WKS.bigWig hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF300IOF bigWig fold change over control ENCSR907JPB ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZMIZ1-human ENCAB000AMQ DNA False 2016-08-24 ENCODE 1 ENCFF335IPE, ENCFF708LOC 304291885 ENCODE Processing Pipeline c1dc4a908af8cd3d8f16818cfeef1b2d https://www.encodeproject.org/files/ENCFF300IOF/@@download/ENCFF300IOF.bigWig hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF257YKB bigWig fold change over control ENCSR907JPB ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZMIZ1-human ENCAB000AMQ DNA False 2016-08-24 ENCODE 1, 2 ENCFF335IPE, ENCFF621GUP, ENCFF708LOC, ENCFF879OQC 872995416 ENCODE Processing Pipeline 6be9eeecc3c8b86762558bc985b51ab4 https://www.encodeproject.org/files/ENCFF257YKB/@@download/ENCFF257YKB.bigWig hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF041EID bed narrowPeak peaks ENCSR907JPB ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZMIZ1-human ENCAB000AMQ DNA False 2016-08-24 ENCODE 1 ENCFF335IPE, ENCFF708LOC 3776183 ENCODE Processing Pipeline fef6dda7aa2bb57a75863df1649746b9 https://www.encodeproject.org/files/ENCFF041EID/@@download/ENCFF041EID.bed.gz hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF248AZH bed narrowPeak peaks ENCSR907JPB ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZMIZ1-human ENCAB000AMQ DNA False 2016-08-24 ENCODE 2 ENCFF621GUP, ENCFF879OQC 4746442 ENCODE Processing Pipeline 920cb17166e327ea21f13d89051b2cd1 https://www.encodeproject.org/files/ENCFF248AZH/@@download/ENCFF248AZH.bed.gz hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF703JKU bigBed narrowPeak peaks ENCSR907JPB ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZMIZ1-human ENCAB000AMQ DNA False 2016-08-24 ENCODE 1 ENCFF041EID 8472549 ENCODE Processing Pipeline 86b08f6e94f4d862aeca72c0c3e5f75b https://www.encodeproject.org/files/ENCFF703JKU/@@download/ENCFF703JKU.bigBed hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF751SBQ bigWig signal p-value ENCSR907JPB ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZMIZ1-human ENCAB000AMQ DNA False 2016-08-24 ENCODE 1, 2 ENCFF335IPE, ENCFF621GUP, ENCFF708LOC, ENCFF879OQC 1012517731 ENCODE Processing Pipeline dc7da8bef18dbe4ef3d4b9b134468e07 https://www.encodeproject.org/files/ENCFF751SBQ/@@download/ENCFF751SBQ.bigWig hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF580ZHQ bigWig fold change over control ENCSR907JPB ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZMIZ1-human ENCAB000AMQ DNA False 2016-08-24 ENCODE 2 ENCFF621GUP, ENCFF879OQC 435275595 ENCODE Processing Pipeline f30f94fc52fd9d8fa31d09999d8caf6d https://www.encodeproject.org/files/ENCFF580ZHQ/@@download/ENCFF580ZHQ.bigWig hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF133TIH bed narrowPeak conservative idr thresholded peaks ENCSR907JPB ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZMIZ1-human ENCAB000AMQ DNA False 2016-08-24 ENCODE 1, 2 ENCFF001TDO, ENCFF041EID, ENCFF248AZH, ENCFF469ORR 12028 ENCODE Processing Pipeline 15e62804318fd046a39e2b6f1070160a https://www.encodeproject.org/files/ENCFF133TIH/@@download/ENCFF133TIH.bed.gz hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF597DIY bed narrowPeak optimal idr thresholded peaks ENCSR907JPB ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZMIZ1-human ENCAB000AMQ DNA False 2016-08-24 ENCODE 1, 2 ENCFF001TDO, ENCFF041EID, ENCFF248AZH, ENCFF469ORR 20168 ENCODE Processing Pipeline 23fbea40b5d67edb1d62e497fbf80945 https://www.encodeproject.org/files/ENCFF597DIY/@@download/ENCFF597DIY.bed.gz hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF861HZJ bigBed narrowPeak peaks ENCSR907JPB ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZMIZ1-human ENCAB000AMQ DNA False 2016-08-24 ENCODE 2 ENCFF248AZH 11020136 ENCODE Processing Pipeline 2b44695fa29a4d4f4316b1ff9c3c1b8b https://www.encodeproject.org/files/ENCFF861HZJ/@@download/ENCFF861HZJ.bigBed hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF230JVQ bigBed narrowPeak peaks ENCSR907JPB ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZMIZ1-human ENCAB000AMQ DNA False 2016-08-24 ENCODE 1, 2 ENCFF469ORR 11489211 ENCODE Processing Pipeline ad265ec9533f3a2954dd0d47529f322b https://www.encodeproject.org/files/ENCFF230JVQ/@@download/ENCFF230JVQ.bigBed hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF469ORR bed narrowPeak peaks ENCSR907JPB ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZMIZ1-human ENCAB000AMQ DNA False 2016-08-24 ENCODE 1, 2 ENCFF335IPE, ENCFF621GUP, ENCFF708LOC, ENCFF879OQC 5411942 ENCODE Processing Pipeline 475b1cc58fd630bdb84cb1586163e4a7 https://www.encodeproject.org/files/ENCFF469ORR/@@download/ENCFF469ORR.bed.gz hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF615IQF bigBed narrowPeak conservative idr thresholded peaks ENCSR907JPB ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZMIZ1-human ENCAB000AMQ DNA False 2016-08-24 ENCODE 1, 2 ENCFF133TIH 72460 ENCODE Processing Pipeline cbf92ada7f544043868836ff74862d1c https://www.encodeproject.org/files/ENCFF615IQF/@@download/ENCFF615IQF.bigBed hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF583GOX bigBed narrowPeak optimal idr thresholded peaks ENCSR907JPB ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZMIZ1-human ENCAB000AMQ DNA False 2016-08-24 ENCODE 1, 2 ENCFF597DIY 77137 ENCODE Processing Pipeline 2bef4c66b667068ad71939344b276aa6 https://www.encodeproject.org/files/ENCFF583GOX/@@download/ENCFF583GOX.bigBed hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF577XSW bam unfiltered alignments ENCSR907JPB ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZMIZ1-human ENCAB000AMQ DNA False 2016-08-24 ENCODE 2 36 ENCFF002EWG, ENCFF643CGH 1209366677 ENCODE Processing Pipeline 3bd170f3b03039b475c3ec9b03610f9f https://www.encodeproject.org/files/ENCFF577XSW/@@download/ENCFF577XSW.bam GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF844AWP bam unfiltered alignments ENCSR907JPB ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZMIZ1-human ENCAB000AMQ DNA False 2016-08-24 ENCODE 1 36 ENCFF002EWF, ENCFF643CGH 999600246 ENCODE Processing Pipeline b3827fe0d40c7a43b5bd3bf2c4f7f61c https://www.encodeproject.org/files/ENCFF844AWP/@@download/ENCFF844AWP.bam GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF384WCY bam alignments ENCSR907JPB ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZMIZ1-human ENCAB000AMQ DNA False 2016-08-24 ENCODE 2 36 ENCFF002EWG, ENCFF643CGH 782324033 ENCODE Processing Pipeline 4dfa8c3dd51b0e66fba53614770a2b40 https://www.encodeproject.org/files/ENCFF384WCY/@@download/ENCFF384WCY.bam GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF417HNM bam alignments ENCSR907JPB ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZMIZ1-human ENCAB000AMQ DNA False 2016-08-24 ENCODE 1 36 ENCFF002EWF, ENCFF643CGH 588147537 ENCODE Processing Pipeline 2771d3024927f57a1e507381718c73ec https://www.encodeproject.org/files/ENCFF417HNM/@@download/ENCFF417HNM.bam GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF380XDE bigWig signal p-value ENCSR907JPB ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZMIZ1-human ENCAB000AMQ DNA False 2016-08-24 ENCODE 1 ENCFF156FED, ENCFF417HNM 478311736 ENCODE Processing Pipeline 313febd91c6f6fcacbecbd056501d6a3 https://www.encodeproject.org/files/ENCFF380XDE/@@download/ENCFF380XDE.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF623HXC bigWig signal p-value ENCSR907JPB ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZMIZ1-human ENCAB000AMQ DNA False 2016-08-24 ENCODE 2 ENCFF384WCY, ENCFF577FNG 537377957 ENCODE Processing Pipeline efabf0778157dc485a64f8f43bbfed7b https://www.encodeproject.org/files/ENCFF623HXC/@@download/ENCFF623HXC.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF136ZHB bigWig signal p-value ENCSR907JPB ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZMIZ1-human ENCAB000AMQ DNA False 2016-08-24 ENCODE 1, 2 ENCFF156FED, ENCFF384WCY, ENCFF417HNM, ENCFF577FNG 1101038545 ENCODE Processing Pipeline 7188a375f9c0706dffbc0700c70c90a6 https://www.encodeproject.org/files/ENCFF136ZHB/@@download/ENCFF136ZHB.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF719CVQ bigWig fold change over control ENCSR907JPB ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZMIZ1-human ENCAB000AMQ DNA False 2016-08-24 ENCODE 1 ENCFF156FED, ENCFF417HNM 303943831 ENCODE Processing Pipeline d3027ca747da24dce7dfc835fded2143 https://www.encodeproject.org/files/ENCFF719CVQ/@@download/ENCFF719CVQ.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF420XTO bigWig fold change over control ENCSR907JPB ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZMIZ1-human ENCAB000AMQ DNA False 2016-08-24 ENCODE 2 ENCFF384WCY, ENCFF577FNG 438131765 ENCODE Processing Pipeline 0bf30cec64200b4a8b7239ea719a8f41 https://www.encodeproject.org/files/ENCFF420XTO/@@download/ENCFF420XTO.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF656SAU bigWig fold change over control ENCSR907JPB ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZMIZ1-human ENCAB000AMQ DNA False 2016-08-24 ENCODE 1, 2 ENCFF156FED, ENCFF384WCY, ENCFF417HNM, ENCFF577FNG 808911650 ENCODE Processing Pipeline da8efc7969e7553061d27265b76faa44 https://www.encodeproject.org/files/ENCFF656SAU/@@download/ENCFF656SAU.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF941TIL bed narrowPeak peaks ENCSR907JPB ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZMIZ1-human ENCAB000AMQ DNA False 2016-08-24 ENCODE 1 ENCFF156FED, ENCFF417HNM 3653464 ENCODE Processing Pipeline 6770de3c57d497643b8af49cb3c3cdf5 https://www.encodeproject.org/files/ENCFF941TIL/@@download/ENCFF941TIL.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF404UQP bed narrowPeak peaks ENCSR907JPB ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZMIZ1-human ENCAB000AMQ DNA False 2016-08-24 ENCODE 2 ENCFF384WCY, ENCFF577FNG 4530743 ENCODE Processing Pipeline 64ab67e5c3dbc0c3f576f2ecb615aa36 https://www.encodeproject.org/files/ENCFF404UQP/@@download/ENCFF404UQP.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF944RLM bigBed narrowPeak peaks ENCSR907JPB ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZMIZ1-human ENCAB000AMQ DNA False 2016-08-24 ENCODE 1 ENCFF941TIL 8189942 ENCODE Processing Pipeline 7c271bafe015e046910891540154e593 https://www.encodeproject.org/files/ENCFF944RLM/@@download/ENCFF944RLM.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF055TID bed narrowPeak peaks ENCSR907JPB ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZMIZ1-human ENCAB000AMQ DNA False 2016-08-24 ENCODE 1, 2 ENCFF156FED, ENCFF384WCY, ENCFF417HNM, ENCFF577FNG 5155110 ENCODE Processing Pipeline 77dfe32ba31c0492e569913b23d714bb https://www.encodeproject.org/files/ENCFF055TID/@@download/ENCFF055TID.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF786CCA bigBed narrowPeak peaks ENCSR907JPB ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZMIZ1-human ENCAB000AMQ DNA False 2016-08-24 ENCODE 2 ENCFF404UQP 10830630 ENCODE Processing Pipeline c243f7fef0aeaeab838c7e93f0c34db7 https://www.encodeproject.org/files/ENCFF786CCA/@@download/ENCFF786CCA.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF061JCP bigBed narrowPeak peaks ENCSR907JPB ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZMIZ1-human ENCAB000AMQ DNA False 2016-08-24 ENCODE 1, 2 ENCFF055TID 11404973 ENCODE Processing Pipeline 53fc429006d186edd693efde38ad866c https://www.encodeproject.org/files/ENCFF061JCP/@@download/ENCFF061JCP.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF953ZSO bed narrowPeak conservative idr thresholded peaks ENCSR907JPB ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZMIZ1-human ENCAB000AMQ DNA False 2016-08-24 ENCODE 1, 2 ENCFF055TID, ENCFF404UQP, ENCFF419RSJ, ENCFF941TIL 12401 ENCODE Processing Pipeline 37ac6d6b1b1ffaae569fc32783c9e2ce https://www.encodeproject.org/files/ENCFF953ZSO/@@download/ENCFF953ZSO.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF438MHO bigBed narrowPeak conservative idr thresholded peaks ENCSR907JPB ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZMIZ1-human ENCAB000AMQ DNA False 2016-08-24 ENCODE 1, 2 ENCFF953ZSO 73052 ENCODE Processing Pipeline 1cadc801f6790364506dc9d25d11f489 https://www.encodeproject.org/files/ENCFF438MHO/@@download/ENCFF438MHO.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF526PMI bed narrowPeak optimal idr thresholded peaks ENCSR907JPB ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZMIZ1-human ENCAB000AMQ DNA False 2016-08-24 ENCODE 1, 2 ENCFF055TID, ENCFF404UQP, ENCFF419RSJ, ENCFF941TIL 21193 ENCODE Processing Pipeline 69fd6d6fa35b80f8d160e562391c7d70 https://www.encodeproject.org/files/ENCFF526PMI/@@download/ENCFF526PMI.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF368CEK bigBed narrowPeak optimal idr thresholded peaks ENCSR907JPB ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZMIZ1-human ENCAB000AMQ DNA False 2016-08-24 ENCODE 1, 2 ENCFF526PMI 78735 ENCODE Processing Pipeline a8a98af9211ff78e838082b1285d2c04 https://www.encodeproject.org/files/ENCFF368CEK/@@download/ENCFF368CEK.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF532ZMV bam unfiltered alignments ENCSR113LAS ChIP-seq EFO:0002067 K562 cell line Homo sapiens MTA2-human ENCAB744GOI DNA False 2016-06-14 ENCODE 1 100 ENCFF697STR, ENCFF766QOB, ENCFF807MUK 3593872994 ENCODE Processing Pipeline 02e34e6c280cdc8953ff3e33e6cbf780 https://www.encodeproject.org/files/ENCFF532ZMV/@@download/ENCFF532ZMV.bam hg19 released low read depth ENCFF538CSL bam unfiltered alignments ENCSR113LAS ChIP-seq EFO:0002067 K562 cell line Homo sapiens MTA2-human ENCAB744GOI DNA False 2016-06-14 ENCODE 2 100 ENCFF374EZV, ENCFF807MUK, ENCFF887TWQ 3304442529 ENCODE Processing Pipeline bbb56665134b9fe9fc85ae3e03be5240 https://www.encodeproject.org/files/ENCFF538CSL/@@download/ENCFF538CSL.bam hg19 released low read depth ENCFF887TWQ fastq reads ENCSR113LAS ChIP-seq EFO:0002067 K562 cell line Homo sapiens MTA2-human ENCAB744GOI DNA False 2016-06-14 ENCODE 2 1 100 paired-ended 1 ENCFF374EZV 1464508151 Michael Snyder, Stanford 1ea14147f96fdab2e6614a64452d19c0 SRA:SRR5111132 https://www.encodeproject.org/files/ENCFF887TWQ/@@download/ENCFF887TWQ.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFD/ released low read depth ENCFF697STR fastq reads ENCSR113LAS ChIP-seq EFO:0002067 K562 cell line Homo sapiens MTA2-human ENCAB744GOI DNA False 2016-06-14 ENCODE 1 1 100 paired-ended 1 ENCFF766QOB 1632011071 Michael Snyder, Stanford a847ce904c322894c5baeedda0b5144c SRA:SRR5111131 https://www.encodeproject.org/files/ENCFF697STR/@@download/ENCFF697STR.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFF/ released low read depth ENCFF766QOB fastq reads ENCSR113LAS ChIP-seq EFO:0002067 K562 cell line Homo sapiens MTA2-human ENCAB744GOI DNA False 2016-06-14 ENCODE 1 1 100 paired-ended 2 ENCFF697STR 1626977381 Michael Snyder, Stanford 01c2562d976dea65e8adaed002deb397 SRA:SRR5111131 https://www.encodeproject.org/files/ENCFF766QOB/@@download/ENCFF766QOB.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFH/ released low read depth ENCFF374EZV fastq reads ENCSR113LAS ChIP-seq EFO:0002067 K562 cell line Homo sapiens MTA2-human ENCAB744GOI DNA False 2016-06-14 ENCODE 2 1 100 paired-ended 2 ENCFF887TWQ 1509157592 Michael Snyder, Stanford f4136ea8108af7fd46d80acf665be8a4 SRA:SRR5111132 https://www.encodeproject.org/files/ENCFF374EZV/@@download/ENCFF374EZV.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFA/ released low read depth ENCFF568FRV bam alignments ENCSR113LAS ChIP-seq EFO:0002067 K562 cell line Homo sapiens MTA2-human ENCAB744GOI DNA False 2016-06-14 ENCODE 1 100 ENCFF697STR, ENCFF766QOB, ENCFF807MUK 2905773575 ENCODE Processing Pipeline 297f4dae172fc5a619d35fa713777ce2 https://www.encodeproject.org/files/ENCFF568FRV/@@download/ENCFF568FRV.bam hg19 released low read depth ENCFF333NCC bam alignments ENCSR113LAS ChIP-seq EFO:0002067 K562 cell line Homo sapiens MTA2-human ENCAB744GOI DNA False 2016-06-14 ENCODE 2 100 ENCFF374EZV, ENCFF807MUK, ENCFF887TWQ 2802016440 ENCODE Processing Pipeline 7c447ea4db24663dfc7cf2fb5d48107c https://www.encodeproject.org/files/ENCFF333NCC/@@download/ENCFF333NCC.bam hg19 released low read depth ENCFF336JJI bigWig signal p-value ENCSR113LAS ChIP-seq EFO:0002067 K562 cell line Homo sapiens MTA2-human ENCAB744GOI DNA False 2016-06-14 ENCODE 1 ENCFF568FRV, ENCFF581ZJL 1000081353 ENCODE Processing Pipeline ab32b5b70ef6e75e6a89f2a611582e1b https://www.encodeproject.org/files/ENCFF336JJI/@@download/ENCFF336JJI.bigWig hg19 released low read depth ENCFF917BYM bigWig signal p-value ENCSR113LAS ChIP-seq EFO:0002067 K562 cell line Homo sapiens MTA2-human ENCAB744GOI DNA False 2016-06-14 ENCODE 2 ENCFF051LWI, ENCFF333NCC 867527742 ENCODE Processing Pipeline 8e541a4c52909517a6abe2e91d738a79 https://www.encodeproject.org/files/ENCFF917BYM/@@download/ENCFF917BYM.bigWig hg19 released low read depth ENCFF060ICO bigWig signal p-value ENCSR113LAS ChIP-seq EFO:0002067 K562 cell line Homo sapiens MTA2-human ENCAB744GOI DNA False 2016-06-14 ENCODE 1, 2 ENCFF051LWI, ENCFF333NCC, ENCFF568FRV, ENCFF581ZJL 1613148476 ENCODE Processing Pipeline 1683f4d51a5bba8bdf4bfded3ba83567 https://www.encodeproject.org/files/ENCFF060ICO/@@download/ENCFF060ICO.bigWig hg19 released low read depth ENCFF426LYI bigWig fold change over control ENCSR113LAS ChIP-seq EFO:0002067 K562 cell line Homo sapiens MTA2-human ENCAB744GOI DNA False 2016-06-14 ENCODE 1 ENCFF568FRV, ENCFF581ZJL 905355606 ENCODE Processing Pipeline 414cca2594a431ce114e41e793738af1 https://www.encodeproject.org/files/ENCFF426LYI/@@download/ENCFF426LYI.bigWig hg19 released low read depth ENCFF842KMB bigWig fold change over control ENCSR113LAS ChIP-seq EFO:0002067 K562 cell line Homo sapiens MTA2-human ENCAB744GOI DNA False 2016-06-14 ENCODE 2 ENCFF051LWI, ENCFF333NCC 881049267 ENCODE Processing Pipeline f5dd8a32bdb510e390934fd68493eda0 https://www.encodeproject.org/files/ENCFF842KMB/@@download/ENCFF842KMB.bigWig hg19 released low read depth ENCFF749MZJ bigWig fold change over control ENCSR113LAS ChIP-seq EFO:0002067 K562 cell line Homo sapiens MTA2-human ENCAB744GOI DNA False 2016-06-14 ENCODE 1, 2 ENCFF051LWI, ENCFF333NCC, ENCFF568FRV, ENCFF581ZJL 1786543276 ENCODE Processing Pipeline ad5ceecbebc2f7832b51636a603ccb73 https://www.encodeproject.org/files/ENCFF749MZJ/@@download/ENCFF749MZJ.bigWig hg19 released low read depth ENCFF329FRY bigBed narrowPeak peaks ENCSR113LAS ChIP-seq EFO:0002067 K562 cell line Homo sapiens MTA2-human ENCAB744GOI DNA False 2016-06-14 ENCODE 1 ENCFF501DZY 13396964 ENCODE Processing Pipeline 55f2a14a34be309556a327b90d86fe50 https://www.encodeproject.org/files/ENCFF329FRY/@@download/ENCFF329FRY.bigBed hg19 released low read depth ENCFF094YIY bed narrowPeak peaks ENCSR113LAS ChIP-seq EFO:0002067 K562 cell line Homo sapiens MTA2-human ENCAB744GOI DNA False 2016-06-14 ENCODE 2 ENCFF051LWI, ENCFF333NCC 6297379 ENCODE Processing Pipeline 642dae0844a0e8d8dd075f82b553215f https://www.encodeproject.org/files/ENCFF094YIY/@@download/ENCFF094YIY.bed.gz hg19 released low read depth ENCFF501DZY bed narrowPeak peaks ENCSR113LAS ChIP-seq EFO:0002067 K562 cell line Homo sapiens MTA2-human ENCAB744GOI DNA False 2016-06-14 ENCODE 1 ENCFF568FRV, ENCFF581ZJL 6216671 ENCODE Processing Pipeline 930752e7e889e06e0e3a436fa59bb5ef https://www.encodeproject.org/files/ENCFF501DZY/@@download/ENCFF501DZY.bed.gz hg19 released low read depth ENCFF648SNQ bigBed narrowPeak peaks ENCSR113LAS ChIP-seq EFO:0002067 K562 cell line Homo sapiens MTA2-human ENCAB744GOI DNA False 2016-06-14 ENCODE 2 ENCFF094YIY 13362123 ENCODE Processing Pipeline 1838c35e1391ee011dc3b2700477dcc8 https://www.encodeproject.org/files/ENCFF648SNQ/@@download/ENCFF648SNQ.bigBed hg19 released low read depth ENCFF186VAU bed narrowPeak peaks ENCSR113LAS ChIP-seq EFO:0002067 K562 cell line Homo sapiens MTA2-human ENCAB744GOI DNA False 2016-06-14 ENCODE 1, 2 ENCFF051LWI, ENCFF333NCC, ENCFF568FRV, ENCFF581ZJL 7097726 ENCODE Processing Pipeline d7c9ad3f216460e2d0dd721db5ec966e https://www.encodeproject.org/files/ENCFF186VAU/@@download/ENCFF186VAU.bed.gz hg19 released low read depth ENCFF316TDH bigBed narrowPeak peaks ENCSR113LAS ChIP-seq EFO:0002067 K562 cell line Homo sapiens MTA2-human ENCAB744GOI DNA False 2016-06-14 ENCODE 1, 2 ENCFF186VAU 13332392 ENCODE Processing Pipeline 19a17b2e682ae5218d16211789d60702 https://www.encodeproject.org/files/ENCFF316TDH/@@download/ENCFF316TDH.bigBed hg19 released low read depth ENCFF158BEJ bam unfiltered alignments ENCSR113LAS ChIP-seq EFO:0002067 K562 cell line Homo sapiens MTA2-human ENCAB744GOI DNA False 2016-06-14 ENCODE 2 100 ENCFF374EZV, ENCFF643CGH, ENCFF887TWQ 3307702605 ENCODE Processing Pipeline d11ea33f4d9019cc161861fbb938535a https://www.encodeproject.org/files/ENCFF158BEJ/@@download/ENCFF158BEJ.bam GRCh38 released low read depth ENCFF509PAP bam unfiltered alignments ENCSR113LAS ChIP-seq EFO:0002067 K562 cell line Homo sapiens MTA2-human ENCAB744GOI DNA False 2016-06-14 ENCODE 1 100 ENCFF643CGH, ENCFF697STR, ENCFF766QOB 3596801382 ENCODE Processing Pipeline f1c926b0c7b288e3beb72465453bc8e2 https://www.encodeproject.org/files/ENCFF509PAP/@@download/ENCFF509PAP.bam GRCh38 released low read depth ENCFF254IUH bam alignments ENCSR113LAS ChIP-seq EFO:0002067 K562 cell line Homo sapiens MTA2-human ENCAB744GOI DNA False 2016-06-14 ENCODE 1 100 ENCFF643CGH, ENCFF697STR, ENCFF766QOB 2907338780 ENCODE Processing Pipeline 743060d1a4e279740492b634f01be06d https://www.encodeproject.org/files/ENCFF254IUH/@@download/ENCFF254IUH.bam GRCh38 released low read depth ENCFF167NVK bam alignments ENCSR113LAS ChIP-seq EFO:0002067 K562 cell line Homo sapiens MTA2-human ENCAB744GOI DNA False 2016-06-14 ENCODE 2 100 ENCFF374EZV, ENCFF643CGH, ENCFF887TWQ 2804124820 ENCODE Processing Pipeline eacdcd40493b32e31a9f978a19de2178 https://www.encodeproject.org/files/ENCFF167NVK/@@download/ENCFF167NVK.bam GRCh38 released low read depth ENCFF085ZWO bigWig signal p-value ENCSR113LAS ChIP-seq EFO:0002067 K562 cell line Homo sapiens MTA2-human ENCAB744GOI DNA False 2016-06-14 ENCODE 1 ENCFF254IUH, ENCFF910IKB 927422434 ENCODE Processing Pipeline c10f0fd96290e52059c4821d798f194b https://www.encodeproject.org/files/ENCFF085ZWO/@@download/ENCFF085ZWO.bigWig GRCh38 released low read depth ENCFF157QPI bigWig signal p-value ENCSR113LAS ChIP-seq EFO:0002067 K562 cell line Homo sapiens MTA2-human ENCAB744GOI DNA False 2016-06-14 ENCODE 2 ENCFF167NVK, ENCFF227IZS 889081880 ENCODE Processing Pipeline 7f7b89e41eb7cbc75dd8d900f0555c1f https://www.encodeproject.org/files/ENCFF157QPI/@@download/ENCFF157QPI.bigWig GRCh38 released low read depth ENCFF175ESC bigWig signal p-value ENCSR113LAS ChIP-seq EFO:0002067 K562 cell line Homo sapiens MTA2-human ENCAB744GOI DNA False 2016-06-14 ENCODE 1, 2 ENCFF167NVK, ENCFF227IZS, ENCFF254IUH, ENCFF910IKB 1818903033 ENCODE Processing Pipeline 90293a09dbf7f47dd59e2511a7efb620 https://www.encodeproject.org/files/ENCFF175ESC/@@download/ENCFF175ESC.bigWig GRCh38 released low read depth ENCFF220ANT bigWig fold change over control ENCSR113LAS ChIP-seq EFO:0002067 K562 cell line Homo sapiens MTA2-human ENCAB744GOI DNA False 2016-06-14 ENCODE 1 ENCFF254IUH, ENCFF910IKB 915138037 ENCODE Processing Pipeline 231097a76931246ee6ff8fd0ae9ecd9a https://www.encodeproject.org/files/ENCFF220ANT/@@download/ENCFF220ANT.bigWig GRCh38 released low read depth ENCFF539UWO bigWig fold change over control ENCSR113LAS ChIP-seq EFO:0002067 K562 cell line Homo sapiens MTA2-human ENCAB744GOI DNA False 2016-06-14 ENCODE 2 ENCFF167NVK, ENCFF227IZS 882508802 ENCODE Processing Pipeline 68666a13db52d7193b80e084eebcb31a https://www.encodeproject.org/files/ENCFF539UWO/@@download/ENCFF539UWO.bigWig GRCh38 released low read depth ENCFF113RTQ bigWig fold change over control ENCSR113LAS ChIP-seq EFO:0002067 K562 cell line Homo sapiens MTA2-human ENCAB744GOI DNA False 2016-06-14 ENCODE 1, 2 ENCFF167NVK, ENCFF227IZS, ENCFF254IUH, ENCFF910IKB 1781016960 ENCODE Processing Pipeline b149deeac849d6c2e075c6e1c1ca9a4b https://www.encodeproject.org/files/ENCFF113RTQ/@@download/ENCFF113RTQ.bigWig GRCh38 released low read depth ENCFF817DXM bed narrowPeak peaks ENCSR113LAS ChIP-seq EFO:0002067 K562 cell line Homo sapiens MTA2-human ENCAB744GOI DNA False 2016-06-14 ENCODE 1 ENCFF254IUH, ENCFF910IKB 6097340 ENCODE Processing Pipeline 91c110f53c2a075d1f90a5e9f3caa392 https://www.encodeproject.org/files/ENCFF817DXM/@@download/ENCFF817DXM.bed.gz GRCh38 released low read depth ENCFF136BJU bed narrowPeak peaks ENCSR113LAS ChIP-seq EFO:0002067 K562 cell line Homo sapiens MTA2-human ENCAB744GOI DNA False 2016-06-14 ENCODE 2 ENCFF167NVK, ENCFF227IZS 6171534 ENCODE Processing Pipeline c52340bfe4754d2535b7a9213ffc54f5 https://www.encodeproject.org/files/ENCFF136BJU/@@download/ENCFF136BJU.bed.gz GRCh38 released low read depth ENCFF418PEX bed narrowPeak peaks ENCSR113LAS ChIP-seq EFO:0002067 K562 cell line Homo sapiens MTA2-human ENCAB744GOI DNA False 2016-06-14 ENCODE 1, 2 ENCFF167NVK, ENCFF227IZS, ENCFF254IUH, ENCFF910IKB 7069186 ENCODE Processing Pipeline 51d63d06686f5205a3d744be3053fdc2 https://www.encodeproject.org/files/ENCFF418PEX/@@download/ENCFF418PEX.bed.gz GRCh38 released low read depth ENCFF134HLI bigBed narrowPeak peaks ENCSR113LAS ChIP-seq EFO:0002067 K562 cell line Homo sapiens MTA2-human ENCAB744GOI DNA False 2016-06-14 ENCODE 1 ENCFF817DXM 13386457 ENCODE Processing Pipeline da5186e4a3984e7d4c8da73e25e4ec6a https://www.encodeproject.org/files/ENCFF134HLI/@@download/ENCFF134HLI.bigBed GRCh38 released low read depth ENCFF929ZLA bigBed narrowPeak peaks ENCSR113LAS ChIP-seq EFO:0002067 K562 cell line Homo sapiens MTA2-human ENCAB744GOI DNA False 2016-06-14 ENCODE 2 ENCFF136BJU 13375679 ENCODE Processing Pipeline 815793f2a99684c6c6f0cc78dfd56586 https://www.encodeproject.org/files/ENCFF929ZLA/@@download/ENCFF929ZLA.bigBed GRCh38 released low read depth ENCFF453AGZ bigBed narrowPeak peaks ENCSR113LAS ChIP-seq EFO:0002067 K562 cell line Homo sapiens MTA2-human ENCAB744GOI DNA False 2016-06-14 ENCODE 1, 2 ENCFF418PEX 13364338 ENCODE Processing Pipeline b8974d7c5b67ca61c454064996377fa9 https://www.encodeproject.org/files/ENCFF453AGZ/@@download/ENCFF453AGZ.bigBed GRCh38 released low read depth ENCFF683KZE bigBed narrowPeak conservative idr thresholded peaks ENCSR113LAS ChIP-seq EFO:0002067 K562 cell line Homo sapiens MTA2-human ENCAB744GOI DNA False 2016-06-14 ENCODE 1, 2 ENCFF299JOC 523731 ENCODE Processing Pipeline b5f0c000cad8f4ec649ee16c5558171a https://www.encodeproject.org/files/ENCFF683KZE/@@download/ENCFF683KZE.bigBed GRCh38 released low read depth ENCFF299JOC bed narrowPeak conservative idr thresholded peaks ENCSR113LAS ChIP-seq EFO:0002067 K562 cell line Homo sapiens MTA2-human ENCAB744GOI DNA False 2016-06-14 ENCODE 1, 2 ENCFF136BJU, ENCFF418PEX, ENCFF419RSJ, ENCFF817DXM 254119 ENCODE Processing Pipeline 92589e53ff60a66e990c49240bfe374b https://www.encodeproject.org/files/ENCFF299JOC/@@download/ENCFF299JOC.bed.gz GRCh38 released low read depth ENCFF713ZVD bed narrowPeak optimal idr thresholded peaks ENCSR113LAS ChIP-seq EFO:0002067 K562 cell line Homo sapiens MTA2-human ENCAB744GOI DNA False 2016-06-14 ENCODE 1, 2 ENCFF136BJU, ENCFF418PEX, ENCFF419RSJ, ENCFF817DXM 311438 ENCODE Processing Pipeline 7d5c422e2e0fbd38738e7f2e5ba6653d https://www.encodeproject.org/files/ENCFF713ZVD/@@download/ENCFF713ZVD.bed.gz GRCh38 released low read depth ENCFF094QEC bigBed narrowPeak optimal idr thresholded peaks ENCSR113LAS ChIP-seq EFO:0002067 K562 cell line Homo sapiens MTA2-human ENCAB744GOI DNA False 2016-06-14 ENCODE 1, 2 ENCFF713ZVD 602137 ENCODE Processing Pipeline 9b96c8ed90ad35760299a293300cf4ce https://www.encodeproject.org/files/ENCFF094QEC/@@download/ENCFF094QEC.bigBed GRCh38 released low read depth ENCFF552FHP bigBed narrowPeak conservative idr thresholded peaks ENCSR113LAS ChIP-seq EFO:0002067 K562 cell line Homo sapiens MTA2-human ENCAB744GOI DNA False 2016-06-14 ENCODE 1, 2 ENCFF752DRC 468624 ENCODE Processing Pipeline aae88fc54cadc7c2dd75771f42bbac3b https://www.encodeproject.org/files/ENCFF552FHP/@@download/ENCFF552FHP.bigBed hg19 released low read depth ENCFF752DRC bed narrowPeak conservative idr thresholded peaks ENCSR113LAS ChIP-seq EFO:0002067 K562 cell line Homo sapiens MTA2-human ENCAB744GOI DNA False 2016-06-14 ENCODE 1, 2 ENCFF001TDO, ENCFF094YIY, ENCFF186VAU, ENCFF501DZY 216437 ENCODE Processing Pipeline d34a115aeb98915ee5cbc17d740e2677 https://www.encodeproject.org/files/ENCFF752DRC/@@download/ENCFF752DRC.bed.gz hg19 released low read depth ENCFF410EDG bed narrowPeak optimal idr thresholded peaks ENCSR113LAS ChIP-seq EFO:0002067 K562 cell line Homo sapiens MTA2-human ENCAB744GOI DNA False 2016-06-14 ENCODE 1, 2 ENCFF001TDO, ENCFF094YIY, ENCFF186VAU, ENCFF501DZY 259215 ENCODE Processing Pipeline dcb6e6f91e09c643f12408b087773474 https://www.encodeproject.org/files/ENCFF410EDG/@@download/ENCFF410EDG.bed.gz hg19 released low read depth ENCFF436REM bigBed narrowPeak optimal idr thresholded peaks ENCSR113LAS ChIP-seq EFO:0002067 K562 cell line Homo sapiens MTA2-human ENCAB744GOI DNA False 2016-06-14 ENCODE 1, 2 ENCFF410EDG 524630 ENCODE Processing Pipeline 1471211ef3617d7e336559aae3630e29 https://www.encodeproject.org/files/ENCFF436REM/@@download/ENCFF436REM.bigBed hg19 released low read depth ENCFF130DQU bam unfiltered alignments ENCSR591CCL ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF512-human ENCAB728YTO DNA False 2016-08-24 ENCODE 2 100 ENCFF055XKT, ENCFF807MUK, ENCFF968UUM 9318667967 ENCODE Processing Pipeline 367c83e4df8d77fa2ac53bcc05a07f25 https://www.encodeproject.org/files/ENCFF130DQU/@@download/ENCFF130DQU.bam hg19 released missing genetic modification characterization ENCFF461XCU bam unfiltered alignments ENCSR591CCL ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF512-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1 100 ENCFF123LEB, ENCFF229NRD, ENCFF807MUK 10436702035 ENCODE Processing Pipeline 3eea8a8b636fd8e12f0509ee330b1ca1 https://www.encodeproject.org/files/ENCFF461XCU/@@download/ENCFF461XCU.bam hg19 released missing genetic modification characterization ENCFF123LEB fastq reads ENCSR591CCL ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF512-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1 1 100 paired-ended 1 ENCFF229NRD 4824886729 Michael Snyder, Stanford 105e12cb51784992f3f8be4fba8bd63f SRA:SRR5111876 https://www.encodeproject.org/files/ENCFF123LEB/@@download/ENCFF123LEB.fastq.gz Illumina HiSeq 2000 /files/ENCFF144ZOK/, /files/ENCFF514OKS/ released missing genetic modification characterization ENCFF968UUM fastq reads ENCSR591CCL ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF512-human ENCAB728YTO DNA False 2016-08-24 ENCODE 2 1 100 paired-ended 1 ENCFF055XKT 4304013696 Michael Snyder, Stanford c242e985012e71e2f4aca0c45e722ad2 SRA:SRR5111877 https://www.encodeproject.org/files/ENCFF968UUM/@@download/ENCFF968UUM.fastq.gz Illumina HiSeq 2000 /files/ENCFF144ZOK/, /files/ENCFF514OKS/ released missing genetic modification characterization ENCFF055XKT fastq reads ENCSR591CCL ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF512-human ENCAB728YTO DNA False 2016-08-24 ENCODE 2 1 100 paired-ended 2 ENCFF968UUM 4403233188 Michael Snyder, Stanford 32d9b4361731a95c698f82352a468705 SRA:SRR5111877 https://www.encodeproject.org/files/ENCFF055XKT/@@download/ENCFF055XKT.fastq.gz Illumina HiSeq 2000 /files/ENCFF144ZOK/, /files/ENCFF514OKS/ released missing genetic modification characterization ENCFF229NRD fastq reads ENCSR591CCL ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF512-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1 1 100 paired-ended 2 ENCFF123LEB 4992703432 Michael Snyder, Stanford 2e7e62d520fd87eb51c2aae5cdb83471 SRA:SRR5111876 https://www.encodeproject.org/files/ENCFF229NRD/@@download/ENCFF229NRD.fastq.gz Illumina HiSeq 2000 /files/ENCFF144ZOK/, /files/ENCFF514OKS/ released missing genetic modification characterization ENCFF512JPN bam alignments ENCSR591CCL ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF512-human ENCAB728YTO DNA False 2016-08-24 ENCODE 2 ENCFF055XKT, ENCFF807MUK, ENCFF968UUM 7846285260 ENCODE Processing Pipeline ec62d2bcca56ec3c7b2f9fc246b39caa https://www.encodeproject.org/files/ENCFF512JPN/@@download/ENCFF512JPN.bam hg19 released missing genetic modification characterization ENCFF187NQM bam alignments ENCSR591CCL ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF512-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1 ENCFF123LEB, ENCFF229NRD, ENCFF807MUK 8802767033 ENCODE Processing Pipeline 0c6d08a9602d27c082c2548e0b7779f0 https://www.encodeproject.org/files/ENCFF187NQM/@@download/ENCFF187NQM.bam hg19 released missing genetic modification characterization ENCFF905QBR bigWig signal p-value ENCSR591CCL ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF512-human ENCAB728YTO DNA False 2016-08-24 ENCODE 2 ENCFF267TAG, ENCFF512JPN 1642163013 ENCODE Processing Pipeline 39b36f57d74e52c68a104a0572c02d8e https://www.encodeproject.org/files/ENCFF905QBR/@@download/ENCFF905QBR.bigWig hg19 released missing genetic modification characterization ENCFF720FMQ bigWig signal p-value ENCSR591CCL ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF512-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF187NQM, ENCFF267TAG, ENCFF512JPN 2058758858 ENCODE Processing Pipeline 98c595bbce876068e4652b498cb9f293 https://www.encodeproject.org/files/ENCFF720FMQ/@@download/ENCFF720FMQ.bigWig hg19 released missing genetic modification characterization ENCFF357VCS bed narrowPeak peaks ENCSR591CCL ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF512-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1 ENCFF187NQM, ENCFF267TAG 7293894 ENCODE Processing Pipeline 518350f213fd7e62dcdac573752d7de7 https://www.encodeproject.org/files/ENCFF357VCS/@@download/ENCFF357VCS.bed.gz hg19 released missing genetic modification characterization ENCFF200CGX bigBed narrowPeak conservative idr thresholded peaks ENCSR591CCL ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF512-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF617CTX 792914 ENCODE Processing Pipeline 222b556a854a463ee3ad77cddf9c8281 https://www.encodeproject.org/files/ENCFF200CGX/@@download/ENCFF200CGX.bigBed hg19 released missing genetic modification characterization ENCFF630AMB bigWig signal p-value ENCSR591CCL ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF512-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1 ENCFF187NQM, ENCFF267TAG 2041132665 ENCODE Processing Pipeline 10849b143b4d3e36ffcbbcea749d1ae3 https://www.encodeproject.org/files/ENCFF630AMB/@@download/ENCFF630AMB.bigWig hg19 released missing genetic modification characterization ENCFF530EDL bed narrowPeak peaks ENCSR591CCL ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF512-human ENCAB728YTO DNA False 2016-08-24 ENCODE 2 ENCFF267TAG, ENCFF512JPN 7255330 ENCODE Processing Pipeline 6633f9702b47a79ee6cd79f14b0037b6 https://www.encodeproject.org/files/ENCFF530EDL/@@download/ENCFF530EDL.bed.gz hg19 released missing genetic modification characterization ENCFF870WHI bigWig fold change over control ENCSR591CCL ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF512-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF187NQM, ENCFF267TAG, ENCFF512JPN 2693717105 ENCODE Processing Pipeline 3c88cbe7fc7adb9fabd72700e1797a2a https://www.encodeproject.org/files/ENCFF870WHI/@@download/ENCFF870WHI.bigWig hg19 released missing genetic modification characterization ENCFF188IJE bed narrowPeak peaks ENCSR591CCL ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF512-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF187NQM, ENCFF267TAG, ENCFF512JPN 7382572 ENCODE Processing Pipeline d7a9ee4b6cd62d3ecdfb0efc045880bd https://www.encodeproject.org/files/ENCFF188IJE/@@download/ENCFF188IJE.bed.gz hg19 released missing genetic modification characterization ENCFF719JIJ bigBed narrowPeak optimal idr thresholded peaks ENCSR591CCL ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF512-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF447QUG 848249 ENCODE Processing Pipeline 24601f9e716df3360e722f230c73e98a https://www.encodeproject.org/files/ENCFF719JIJ/@@download/ENCFF719JIJ.bigBed hg19 released missing genetic modification characterization ENCFF350FJL bigWig fold change over control ENCSR591CCL ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF512-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1 ENCFF187NQM, ENCFF267TAG 2047031691 ENCODE Processing Pipeline b685844ab06b2f8d78810ce33112f652 https://www.encodeproject.org/files/ENCFF350FJL/@@download/ENCFF350FJL.bigWig hg19 released missing genetic modification characterization ENCFF206SWP bigWig fold change over control ENCSR591CCL ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF512-human ENCAB728YTO DNA False 2016-08-24 ENCODE 2 ENCFF267TAG, ENCFF512JPN 1961835903 ENCODE Processing Pipeline fe6db8c22861ab3626dc0f35a12c42c5 https://www.encodeproject.org/files/ENCFF206SWP/@@download/ENCFF206SWP.bigWig hg19 released missing genetic modification characterization ENCFF607ZMI bigBed narrowPeak peaks ENCSR591CCL ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF512-human ENCAB728YTO DNA False 2016-08-24 ENCODE 2 ENCFF530EDL 13251257 ENCODE Processing Pipeline 8f7c30e906a0c82914a53aa1fc9eac2d https://www.encodeproject.org/files/ENCFF607ZMI/@@download/ENCFF607ZMI.bigBed hg19 released missing genetic modification characterization ENCFF913XDQ bigBed narrowPeak peaks ENCSR591CCL ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF512-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1 ENCFF357VCS 13023649 ENCODE Processing Pipeline 526eda57c4c76f2fd2837e05514b0e99 https://www.encodeproject.org/files/ENCFF913XDQ/@@download/ENCFF913XDQ.bigBed hg19 released missing genetic modification characterization ENCFF401LSS bigBed narrowPeak peaks ENCSR591CCL ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF512-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF188IJE 13125929 ENCODE Processing Pipeline 91800274e8f71575bb5626fc702b1ac1 https://www.encodeproject.org/files/ENCFF401LSS/@@download/ENCFF401LSS.bigBed hg19 released missing genetic modification characterization ENCFF617CTX bed narrowPeak conservative idr thresholded peaks ENCSR591CCL ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF512-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF001TDO, ENCFF188IJE, ENCFF357VCS, ENCFF530EDL 399859 ENCODE Processing Pipeline 4ebf8b06f0559b86426be620d5035f64 https://www.encodeproject.org/files/ENCFF617CTX/@@download/ENCFF617CTX.bed.gz hg19 released missing genetic modification characterization ENCFF447QUG bed narrowPeak optimal idr thresholded peaks ENCSR591CCL ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF512-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF001TDO, ENCFF188IJE, ENCFF357VCS, ENCFF530EDL 434983 ENCODE Processing Pipeline dccf07316b700c70e29bc268987e06b7 https://www.encodeproject.org/files/ENCFF447QUG/@@download/ENCFF447QUG.bed.gz hg19 released missing genetic modification characterization ENCFF120HZB bam unfiltered alignments ENCSR591CCL ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF512-human ENCAB728YTO DNA False 2016-08-24 ENCODE 2 100 ENCFF055XKT, ENCFF643CGH, ENCFF968UUM 9331172309 ENCODE Processing Pipeline a33ccc82fb196ddacfcf38eb9c591884 https://www.encodeproject.org/files/ENCFF120HZB/@@download/ENCFF120HZB.bam GRCh38 released missing genetic modification characterization ENCFF093LOE bam unfiltered alignments ENCSR591CCL ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF512-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1 100 ENCFF123LEB, ENCFF229NRD, ENCFF643CGH 10451816636 ENCODE Processing Pipeline 5bce9222d870a771a385476ce05ced8e https://www.encodeproject.org/files/ENCFF093LOE/@@download/ENCFF093LOE.bam GRCh38 released missing genetic modification characterization ENCFF300AUR bam alignments ENCSR591CCL ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF512-human ENCAB728YTO DNA False 2016-08-24 ENCODE 2 100 ENCFF055XKT, ENCFF643CGH, ENCFF968UUM 7854969982 ENCODE Processing Pipeline fdb3b060053582b8198bd3619262199e https://www.encodeproject.org/files/ENCFF300AUR/@@download/ENCFF300AUR.bam GRCh38 released missing genetic modification characterization ENCFF996AFH bam alignments ENCSR591CCL ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF512-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1 100 ENCFF123LEB, ENCFF229NRD, ENCFF643CGH 8812012236 ENCODE Processing Pipeline f84bd2a367445b3d27b5011ee01321cc https://www.encodeproject.org/files/ENCFF996AFH/@@download/ENCFF996AFH.bam GRCh38 released missing genetic modification characterization ENCFF686QXP bigWig signal p-value ENCSR591CCL ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF512-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1 ENCFF752BZZ, ENCFF996AFH 1530051586 ENCODE Processing Pipeline aff3d1f32d4335fb1c28727c5fe00bfd https://www.encodeproject.org/files/ENCFF686QXP/@@download/ENCFF686QXP.bigWig GRCh38 released missing genetic modification characterization ENCFF340RSO bigWig signal p-value ENCSR591CCL ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF512-human ENCAB728YTO DNA False 2016-08-24 ENCODE 2 ENCFF300AUR, ENCFF752BZZ 1850013074 ENCODE Processing Pipeline e4ba84082c0f24bb594b7773c2101b5e https://www.encodeproject.org/files/ENCFF340RSO/@@download/ENCFF340RSO.bigWig GRCh38 released missing genetic modification characterization ENCFF547EAU bigWig signal p-value ENCSR591CCL ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF512-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF300AUR, ENCFF752BZZ, ENCFF996AFH 2062513149 ENCODE Processing Pipeline 6b106f2f7451bfd6859bdeec2d1b7f15 https://www.encodeproject.org/files/ENCFF547EAU/@@download/ENCFF547EAU.bigWig GRCh38 released missing genetic modification characterization ENCFF849NDY bigWig fold change over control ENCSR591CCL ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF512-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1 ENCFF752BZZ, ENCFF996AFH 2071061461 ENCODE Processing Pipeline da48e22ef61eb3f613c7c6b73e2494ff https://www.encodeproject.org/files/ENCFF849NDY/@@download/ENCFF849NDY.bigWig GRCh38 released missing genetic modification characterization ENCFF293WHT bigWig fold change over control ENCSR591CCL ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF512-human ENCAB728YTO DNA False 2016-08-24 ENCODE 2 ENCFF300AUR, ENCFF752BZZ 1974935755 ENCODE Processing Pipeline f2bc2c826d456aa3ddab0d22c7160b27 https://www.encodeproject.org/files/ENCFF293WHT/@@download/ENCFF293WHT.bigWig GRCh38 released missing genetic modification characterization ENCFF296TWV bigBed narrowPeak peaks ENCSR591CCL ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF512-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1 ENCFF239NNB 13067166 ENCODE Processing Pipeline 2c16cd7c576526f5fb96c8f4b6f5e5e1 https://www.encodeproject.org/files/ENCFF296TWV/@@download/ENCFF296TWV.bigBed GRCh38 released missing genetic modification characterization ENCFF843CXH bigWig fold change over control ENCSR591CCL ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF512-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF300AUR, ENCFF752BZZ, ENCFF996AFH 2697572506 ENCODE Processing Pipeline 362c9c52e2e020d7abac11af44edd570 https://www.encodeproject.org/files/ENCFF843CXH/@@download/ENCFF843CXH.bigWig GRCh38 released missing genetic modification characterization ENCFF641OLH bed narrowPeak peaks ENCSR591CCL ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF512-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF300AUR, ENCFF752BZZ, ENCFF996AFH 7391955 ENCODE Processing Pipeline ea535c3abe68c6feaba73c05f7a00e36 https://www.encodeproject.org/files/ENCFF641OLH/@@download/ENCFF641OLH.bed.gz GRCh38 released missing genetic modification characterization ENCFF521LOL bed narrowPeak peaks ENCSR591CCL ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF512-human ENCAB728YTO DNA False 2016-08-24 ENCODE 2 ENCFF300AUR, ENCFF752BZZ 7251978 ENCODE Processing Pipeline 383c6e878ccec7b358f50069511bda8a https://www.encodeproject.org/files/ENCFF521LOL/@@download/ENCFF521LOL.bed.gz GRCh38 released missing genetic modification characterization ENCFF231IYV bigBed narrowPeak peaks ENCSR591CCL ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF512-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF641OLH 13156168 ENCODE Processing Pipeline 53f8b4ec38c5915830e14b5c40706906 https://www.encodeproject.org/files/ENCFF231IYV/@@download/ENCFF231IYV.bigBed GRCh38 released missing genetic modification characterization ENCFF528UHH bigBed narrowPeak optimal idr thresholded peaks ENCSR591CCL ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF512-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF825ZIU 848545 ENCODE Processing Pipeline b657ec1885546c905ce02f7495add757 https://www.encodeproject.org/files/ENCFF528UHH/@@download/ENCFF528UHH.bigBed GRCh38 released missing genetic modification characterization ENCFF239NNB bed narrowPeak peaks ENCSR591CCL ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF512-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1 ENCFF752BZZ, ENCFF996AFH 7323908 ENCODE Processing Pipeline 2265d973a36e20077bfb27a294168d9c https://www.encodeproject.org/files/ENCFF239NNB/@@download/ENCFF239NNB.bed.gz GRCh38 released missing genetic modification characterization ENCFF558SDJ bed narrowPeak conservative idr thresholded peaks ENCSR591CCL ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF512-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF239NNB, ENCFF419RSJ, ENCFF521LOL, ENCFF641OLH 405121 ENCODE Processing Pipeline 0c6e95c472c512800fe287ed46a5c9c2 https://www.encodeproject.org/files/ENCFF558SDJ/@@download/ENCFF558SDJ.bed.gz GRCh38 released missing genetic modification characterization ENCFF378AKK bigBed narrowPeak peaks ENCSR591CCL ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF512-human ENCAB728YTO DNA False 2016-08-24 ENCODE 2 ENCFF521LOL 13269013 ENCODE Processing Pipeline 25be5333ec787293deddb85c24dbf41a https://www.encodeproject.org/files/ENCFF378AKK/@@download/ENCFF378AKK.bigBed GRCh38 released missing genetic modification characterization ENCFF485VKN bigBed narrowPeak conservative idr thresholded peaks ENCSR591CCL ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF512-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF558SDJ 806399 ENCODE Processing Pipeline 29200d85d398fd65dac62ef596dcf68f https://www.encodeproject.org/files/ENCFF485VKN/@@download/ENCFF485VKN.bigBed GRCh38 released missing genetic modification characterization ENCFF825ZIU bed narrowPeak optimal idr thresholded peaks ENCSR591CCL ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF512-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF239NNB, ENCFF419RSJ, ENCFF521LOL, ENCFF641OLH 431257 ENCODE Processing Pipeline 4ab70d959a8e6194fb15b79f10ce6026 https://www.encodeproject.org/files/ENCFF825ZIU/@@download/ENCFF825ZIU.bed.gz GRCh38 released missing genetic modification characterization ENCFF599NEO bam unfiltered alignments ENCSR138YYY ChIP-seq EFO:0002067 K562 cell line Homo sapiens GABPB1-human ENCAB704OHJ DNA False 2018-01-26 ENCODE 1 100 ENCFF504MVU, ENCFF807MUK, ENCFF887CDX 5234183463 ENCODE Processing Pipeline 46b092f1f85a41e7f603ed45e9b85c4f https://www.encodeproject.org/files/ENCFF599NEO/@@download/ENCFF599NEO.bam hg19 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF548NJR bam unfiltered alignments ENCSR138YYY ChIP-seq EFO:0002067 K562 cell line Homo sapiens GABPB1-human ENCAB704OHJ DNA False 2018-01-26 ENCODE 2 100 ENCFF381AJO, ENCFF698RJT, ENCFF807MUK 5677565168 ENCODE Processing Pipeline e9d9ef7ad6aa91250fd56349b6144d1a https://www.encodeproject.org/files/ENCFF548NJR/@@download/ENCFF548NJR.bam hg19 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF887CDX fastq reads ENCSR138YYY ChIP-seq EFO:0002067 K562 cell line Homo sapiens GABPB1-human ENCAB704OHJ DNA False 2018-01-26 ENCODE 1 1 100 paired-ended 1 ENCFF504MVU 2528960819 Michael Snyder, Stanford f48ac3f1fc856b01653fc9480c18bc7a https://www.encodeproject.org/files/ENCFF887CDX/@@download/ENCFF887CDX.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFF/ released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF381AJO fastq reads ENCSR138YYY ChIP-seq EFO:0002067 K562 cell line Homo sapiens GABPB1-human ENCAB704OHJ DNA False 2018-01-26 ENCODE 2 1 100 paired-ended 2 ENCFF698RJT 2850538159 Michael Snyder, Stanford d40cd26a3beeb1c52c6933f4ae1e323b https://www.encodeproject.org/files/ENCFF381AJO/@@download/ENCFF381AJO.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFA/ released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF504MVU fastq reads ENCSR138YYY ChIP-seq EFO:0002067 K562 cell line Homo sapiens GABPB1-human ENCAB704OHJ DNA False 2018-01-26 ENCODE 1 1 100 paired-ended 2 ENCFF887CDX 2574119738 Michael Snyder, Stanford 09641c89f5264fcf74ee707096c491c7 https://www.encodeproject.org/files/ENCFF504MVU/@@download/ENCFF504MVU.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFH/ released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF698RJT fastq reads ENCSR138YYY ChIP-seq EFO:0002067 K562 cell line Homo sapiens GABPB1-human ENCAB704OHJ DNA False 2018-01-26 ENCODE 2 1 100 paired-ended 1 ENCFF381AJO 2795201623 Michael Snyder, Stanford 2508e475654e132d0c1c410deea9e222 https://www.encodeproject.org/files/ENCFF698RJT/@@download/ENCFF698RJT.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFD/ released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF960FUD bam alignments ENCSR138YYY ChIP-seq EFO:0002067 K562 cell line Homo sapiens GABPB1-human ENCAB704OHJ DNA False 2018-01-26 ENCODE 2 100 ENCFF381AJO, ENCFF698RJT, ENCFF807MUK 4434335142 ENCODE Processing Pipeline a40b4763fb6e122b39dc61a54cbc6662 https://www.encodeproject.org/files/ENCFF960FUD/@@download/ENCFF960FUD.bam hg19 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF767WRS bam alignments ENCSR138YYY ChIP-seq EFO:0002067 K562 cell line Homo sapiens GABPB1-human ENCAB704OHJ DNA False 2018-01-26 ENCODE 1 100 ENCFF504MVU, ENCFF807MUK, ENCFF887CDX 4254318914 ENCODE Processing Pipeline 93fae145e6e36b2d9c1bc2ef8f1ed107 https://www.encodeproject.org/files/ENCFF767WRS/@@download/ENCFF767WRS.bam hg19 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF048GOD bam unfiltered alignments ENCSR138YYY ChIP-seq EFO:0002067 K562 cell line Homo sapiens GABPB1-human ENCAB704OHJ DNA False 2018-01-26 ENCODE 1 100 ENCFF504MVU, ENCFF643CGH, ENCFF887CDX 5235962982 ENCODE Processing Pipeline dce08b535f50bb4ba632351841a88f74 https://www.encodeproject.org/files/ENCFF048GOD/@@download/ENCFF048GOD.bam GRCh38 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF329TLK bam unfiltered alignments ENCSR138YYY ChIP-seq EFO:0002067 K562 cell line Homo sapiens GABPB1-human ENCAB704OHJ DNA False 2018-01-26 ENCODE 2 100 ENCFF381AJO, ENCFF643CGH, ENCFF698RJT 5678980607 ENCODE Processing Pipeline 9b4be4fdf9cc79adc035c34c7c2d721e https://www.encodeproject.org/files/ENCFF329TLK/@@download/ENCFF329TLK.bam GRCh38 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF838GWC bam alignments ENCSR138YYY ChIP-seq EFO:0002067 K562 cell line Homo sapiens GABPB1-human ENCAB704OHJ DNA False 2018-01-26 ENCODE 2 100 ENCFF381AJO, ENCFF643CGH, ENCFF698RJT 4437749369 ENCODE Processing Pipeline d8d37527df3f0cd0e258b37aac9f0fb9 https://www.encodeproject.org/files/ENCFF838GWC/@@download/ENCFF838GWC.bam GRCh38 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF183DVK bam alignments ENCSR138YYY ChIP-seq EFO:0002067 K562 cell line Homo sapiens GABPB1-human ENCAB704OHJ DNA False 2018-01-26 ENCODE 1 100 ENCFF504MVU, ENCFF643CGH, ENCFF887CDX 4257787373 ENCODE Processing Pipeline 64f72a1aa3d741fd3ba5b6620b07a705 https://www.encodeproject.org/files/ENCFF183DVK/@@download/ENCFF183DVK.bam GRCh38 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF094PNJ bigWig signal p-value ENCSR138YYY ChIP-seq EFO:0002067 K562 cell line Homo sapiens GABPB1-human ENCAB704OHJ DNA False 2018-01-26 ENCODE 1 ENCFF183DVK, ENCFF910IKB 1011094514 ENCODE Processing Pipeline 6f2dd11301362b0708230b55a493e11e https://www.encodeproject.org/files/ENCFF094PNJ/@@download/ENCFF094PNJ.bigWig GRCh38 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF250YLO bigWig signal p-value ENCSR138YYY ChIP-seq EFO:0002067 K562 cell line Homo sapiens GABPB1-human ENCAB704OHJ DNA False 2018-01-26 ENCODE 2 ENCFF227IZS, ENCFF838GWC 986203125 ENCODE Processing Pipeline a53632fd533e17faa4df7bc06c99da7e https://www.encodeproject.org/files/ENCFF250YLO/@@download/ENCFF250YLO.bigWig GRCh38 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF323MBF bigWig signal p-value ENCSR138YYY ChIP-seq EFO:0002067 K562 cell line Homo sapiens GABPB1-human ENCAB704OHJ DNA False 2018-01-26 ENCODE 1, 2 ENCFF183DVK, ENCFF227IZS, ENCFF838GWC, ENCFF910IKB 1619485236 ENCODE Processing Pipeline 99106d6c1f6938da93c3b8262bd52eeb https://www.encodeproject.org/files/ENCFF323MBF/@@download/ENCFF323MBF.bigWig GRCh38 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF790DMB bigWig fold change over control ENCSR138YYY ChIP-seq EFO:0002067 K562 cell line Homo sapiens GABPB1-human ENCAB704OHJ DNA False 2018-01-26 ENCODE 1 ENCFF183DVK, ENCFF910IKB 1115551646 ENCODE Processing Pipeline b0dc2442cdaaa381739a358eab4fa2d3 https://www.encodeproject.org/files/ENCFF790DMB/@@download/ENCFF790DMB.bigWig GRCh38 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF337JKA bigWig fold change over control ENCSR138YYY ChIP-seq EFO:0002067 K562 cell line Homo sapiens GABPB1-human ENCAB704OHJ DNA False 2018-01-26 ENCODE 2 ENCFF227IZS, ENCFF838GWC 1107997838 ENCODE Processing Pipeline 010ef9aa390d9775ae4d593455a4cad1 https://www.encodeproject.org/files/ENCFF337JKA/@@download/ENCFF337JKA.bigWig GRCh38 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF902BRN bigWig fold change over control ENCSR138YYY ChIP-seq EFO:0002067 K562 cell line Homo sapiens GABPB1-human ENCAB704OHJ DNA False 2018-01-26 ENCODE 1, 2 ENCFF183DVK, ENCFF227IZS, ENCFF838GWC, ENCFF910IKB 2034301936 ENCODE Processing Pipeline 9130a6c348f91cdba6ce2e58d14ca153 https://www.encodeproject.org/files/ENCFF902BRN/@@download/ENCFF902BRN.bigWig GRCh38 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF696GBH bed narrowPeak peaks ENCSR138YYY ChIP-seq EFO:0002067 K562 cell line Homo sapiens GABPB1-human ENCAB704OHJ DNA False 2018-01-26 ENCODE 1 ENCFF183DVK, ENCFF910IKB 7002811 ENCODE Processing Pipeline 5ecfe3168dce81fee1ae97b530604439 https://www.encodeproject.org/files/ENCFF696GBH/@@download/ENCFF696GBH.bed.gz GRCh38 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF205ADU bed narrowPeak peaks ENCSR138YYY ChIP-seq EFO:0002067 K562 cell line Homo sapiens GABPB1-human ENCAB704OHJ DNA False 2018-01-26 ENCODE 1, 2 ENCFF183DVK, ENCFF227IZS, ENCFF838GWC, ENCFF910IKB 7209549 ENCODE Processing Pipeline 6198eae85cd548308a956a8729678534 https://www.encodeproject.org/files/ENCFF205ADU/@@download/ENCFF205ADU.bed.gz GRCh38 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF159ZJR bigBed narrowPeak peaks ENCSR138YYY ChIP-seq EFO:0002067 K562 cell line Homo sapiens GABPB1-human ENCAB704OHJ DNA False 2018-01-26 ENCODE 1 ENCFF696GBH 13171612 ENCODE Processing Pipeline 975fe907945119cdb38b8051ec4055bc https://www.encodeproject.org/files/ENCFF159ZJR/@@download/ENCFF159ZJR.bigBed GRCh38 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF369FKU bigBed narrowPeak peaks ENCSR138YYY ChIP-seq EFO:0002067 K562 cell line Homo sapiens GABPB1-human ENCAB704OHJ DNA False 2018-01-26 ENCODE 1, 2 ENCFF205ADU 13039655 ENCODE Processing Pipeline 035f22bf8808a370dab9c6e76a1815d9 https://www.encodeproject.org/files/ENCFF369FKU/@@download/ENCFF369FKU.bigBed GRCh38 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF736VPE bigBed narrowPeak peaks ENCSR138YYY ChIP-seq EFO:0002067 K562 cell line Homo sapiens GABPB1-human ENCAB704OHJ DNA False 2018-01-26 ENCODE 2 ENCFF944EQQ 13114854 ENCODE Processing Pipeline 26fd08296100b766c9994695d8e80b9f https://www.encodeproject.org/files/ENCFF736VPE/@@download/ENCFF736VPE.bigBed GRCh38 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF944EQQ bed narrowPeak peaks ENCSR138YYY ChIP-seq EFO:0002067 K562 cell line Homo sapiens GABPB1-human ENCAB704OHJ DNA False 2018-01-26 ENCODE 2 ENCFF227IZS, ENCFF838GWC 7000541 ENCODE Processing Pipeline 8e291fbf15028a36ce6c1c878ab487fd https://www.encodeproject.org/files/ENCFF944EQQ/@@download/ENCFF944EQQ.bed.gz GRCh38 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF091RKP bigBed narrowPeak conservative idr thresholded peaks ENCSR138YYY ChIP-seq EFO:0002067 K562 cell line Homo sapiens GABPB1-human ENCAB704OHJ DNA False 2018-01-26 ENCODE 1, 2 ENCFF589ZQU 1065483 ENCODE Processing Pipeline 6761d521807d940093515c1541cdf604 https://www.encodeproject.org/files/ENCFF091RKP/@@download/ENCFF091RKP.bigBed GRCh38 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF756JSH bigBed narrowPeak optimal idr thresholded peaks ENCSR138YYY ChIP-seq EFO:0002067 K562 cell line Homo sapiens GABPB1-human ENCAB704OHJ DNA False 2018-01-26 ENCODE 1, 2 ENCFF700DXR 1090173 ENCODE Processing Pipeline 7fc6109760311aa85246b25f9f0876ba https://www.encodeproject.org/files/ENCFF756JSH/@@download/ENCFF756JSH.bigBed GRCh38 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF589ZQU bed narrowPeak conservative idr thresholded peaks ENCSR138YYY ChIP-seq EFO:0002067 K562 cell line Homo sapiens GABPB1-human ENCAB704OHJ DNA False 2018-01-26 ENCODE 1, 2 ENCFF205ADU, ENCFF419RSJ, ENCFF696GBH, ENCFF944EQQ 543451 ENCODE Processing Pipeline 938b1f584ecd2aa84d95b296467e610b https://www.encodeproject.org/files/ENCFF589ZQU/@@download/ENCFF589ZQU.bed.gz GRCh38 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF700DXR bed narrowPeak optimal idr thresholded peaks ENCSR138YYY ChIP-seq EFO:0002067 K562 cell line Homo sapiens GABPB1-human ENCAB704OHJ DNA False 2018-01-26 ENCODE 1, 2 ENCFF205ADU, ENCFF419RSJ, ENCFF696GBH, ENCFF944EQQ 556975 ENCODE Processing Pipeline 3762f1d9d39f122dad2f23e26972d833 https://www.encodeproject.org/files/ENCFF700DXR/@@download/ENCFF700DXR.bed.gz GRCh38 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF445FFT bigWig signal p-value ENCSR138YYY ChIP-seq EFO:0002067 K562 cell line Homo sapiens GABPB1-human ENCAB704OHJ DNA False 2018-01-26 ENCODE 1 ENCFF581ZJL, ENCFF767WRS 1018907981 ENCODE Processing Pipeline 842fd4ba26224efc244aaa85b2c168f4 https://www.encodeproject.org/files/ENCFF445FFT/@@download/ENCFF445FFT.bigWig hg19 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF634YME bigWig fold change over control ENCSR138YYY ChIP-seq EFO:0002067 K562 cell line Homo sapiens GABPB1-human ENCAB704OHJ DNA False 2018-01-26 ENCODE 1 ENCFF581ZJL, ENCFF767WRS 1131190993 ENCODE Processing Pipeline ab50b5a1a1eb864897909727785aebbd https://www.encodeproject.org/files/ENCFF634YME/@@download/ENCFF634YME.bigWig hg19 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF280LGH bigWig signal p-value ENCSR138YYY ChIP-seq EFO:0002067 K562 cell line Homo sapiens GABPB1-human ENCAB704OHJ DNA False 2018-01-26 ENCODE 2 ENCFF051LWI, ENCFF960FUD 1012537621 ENCODE Processing Pipeline 4415d8b19ba055976d87e34198609b8a https://www.encodeproject.org/files/ENCFF280LGH/@@download/ENCFF280LGH.bigWig hg19 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF521FXD bigWig signal p-value ENCSR138YYY ChIP-seq EFO:0002067 K562 cell line Homo sapiens GABPB1-human ENCAB704OHJ DNA False 2018-01-26 ENCODE 1, 2 ENCFF051LWI, ENCFF581ZJL, ENCFF767WRS, ENCFF960FUD 1887106612 ENCODE Processing Pipeline 0c410cc51c0d32a1acae1cc0d139dffc https://www.encodeproject.org/files/ENCFF521FXD/@@download/ENCFF521FXD.bigWig hg19 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF389ZEM bigWig fold change over control ENCSR138YYY ChIP-seq EFO:0002067 K562 cell line Homo sapiens GABPB1-human ENCAB704OHJ DNA False 2018-01-26 ENCODE 1, 2 ENCFF051LWI, ENCFF581ZJL, ENCFF767WRS, ENCFF960FUD 2008589496 ENCODE Processing Pipeline a674017ab86f10a3a4e1637345aa2201 https://www.encodeproject.org/files/ENCFF389ZEM/@@download/ENCFF389ZEM.bigWig hg19 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF032UKF bigWig fold change over control ENCSR138YYY ChIP-seq EFO:0002067 K562 cell line Homo sapiens GABPB1-human ENCAB704OHJ DNA False 2018-01-26 ENCODE 2 ENCFF051LWI, ENCFF960FUD 1103293301 ENCODE Processing Pipeline 4b5da70d2f95e86eb3f3bd1b912a0ea0 https://www.encodeproject.org/files/ENCFF032UKF/@@download/ENCFF032UKF.bigWig hg19 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF451ZHQ bed narrowPeak peaks ENCSR138YYY ChIP-seq EFO:0002067 K562 cell line Homo sapiens GABPB1-human ENCAB704OHJ DNA False 2018-01-26 ENCODE 1, 2 ENCFF051LWI, ENCFF581ZJL, ENCFF767WRS, ENCFF960FUD 7198629 ENCODE Processing Pipeline f047b4467e442222518375c0d8c8d972 https://www.encodeproject.org/files/ENCFF451ZHQ/@@download/ENCFF451ZHQ.bed.gz hg19 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF507BPN bigBed narrowPeak peaks ENCSR138YYY ChIP-seq EFO:0002067 K562 cell line Homo sapiens GABPB1-human ENCAB704OHJ DNA False 2018-01-26 ENCODE 2 ENCFF566QTT 13109001 ENCODE Processing Pipeline 86a1769f98d51681eedaa75eaee882a8 https://www.encodeproject.org/files/ENCFF507BPN/@@download/ENCFF507BPN.bigBed hg19 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF527OVH bed narrowPeak peaks ENCSR138YYY ChIP-seq EFO:0002067 K562 cell line Homo sapiens GABPB1-human ENCAB704OHJ DNA False 2018-01-26 ENCODE 1 ENCFF581ZJL, ENCFF767WRS 7016503 ENCODE Processing Pipeline 4d1f0ebce3bbc49cd26c4b43daf8ae07 https://www.encodeproject.org/files/ENCFF527OVH/@@download/ENCFF527OVH.bed.gz hg19 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF566QTT bed narrowPeak peaks ENCSR138YYY ChIP-seq EFO:0002067 K562 cell line Homo sapiens GABPB1-human ENCAB704OHJ DNA False 2018-01-26 ENCODE 2 ENCFF051LWI, ENCFF960FUD 7002875 ENCODE Processing Pipeline 600fb82586199d1124e579a2893f3444 https://www.encodeproject.org/files/ENCFF566QTT/@@download/ENCFF566QTT.bed.gz hg19 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF165YSV bigBed narrowPeak optimal idr thresholded peaks ENCSR138YYY ChIP-seq EFO:0002067 K562 cell line Homo sapiens GABPB1-human ENCAB704OHJ DNA False 2018-01-26 ENCODE 1, 2 ENCFF517KRT 1075131 ENCODE Processing Pipeline 6cbd19074aa46dd9de74dcae7bec0feb https://www.encodeproject.org/files/ENCFF165YSV/@@download/ENCFF165YSV.bigBed hg19 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF898NOY bigBed narrowPeak peaks ENCSR138YYY ChIP-seq EFO:0002067 K562 cell line Homo sapiens GABPB1-human ENCAB704OHJ DNA False 2018-01-26 ENCODE 1 ENCFF527OVH 13190730 ENCODE Processing Pipeline d54c566550ad2ccd8cc69cb774af4242 https://www.encodeproject.org/files/ENCFF898NOY/@@download/ENCFF898NOY.bigBed hg19 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF599EMD bigBed narrowPeak peaks ENCSR138YYY ChIP-seq EFO:0002067 K562 cell line Homo sapiens GABPB1-human ENCAB704OHJ DNA False 2018-01-26 ENCODE 1, 2 ENCFF451ZHQ 13015500 ENCODE Processing Pipeline ca45bfc65dc14702b3602ff47fa8374d https://www.encodeproject.org/files/ENCFF599EMD/@@download/ENCFF599EMD.bigBed hg19 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF325IMI bed narrowPeak conservative idr thresholded peaks ENCSR138YYY ChIP-seq EFO:0002067 K562 cell line Homo sapiens GABPB1-human ENCAB704OHJ DNA False 2018-01-26 ENCODE 1, 2 ENCFF001TDO, ENCFF451ZHQ, ENCFF527OVH, ENCFF566QTT 536740 ENCODE Processing Pipeline 56be7d89607d0df94b197638b90043a1 https://www.encodeproject.org/files/ENCFF325IMI/@@download/ENCFF325IMI.bed.gz hg19 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF517KRT bed narrowPeak optimal idr thresholded peaks ENCSR138YYY ChIP-seq EFO:0002067 K562 cell line Homo sapiens GABPB1-human ENCAB704OHJ DNA False 2018-01-26 ENCODE 1, 2 ENCFF001TDO, ENCFF451ZHQ, ENCFF527OVH, ENCFF566QTT 549424 ENCODE Processing Pipeline 1f83d9a4aa4dfe13ce2316b957eee10c https://www.encodeproject.org/files/ENCFF517KRT/@@download/ENCFF517KRT.bed.gz hg19 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF409LJY bigBed narrowPeak conservative idr thresholded peaks ENCSR138YYY ChIP-seq EFO:0002067 K562 cell line Homo sapiens GABPB1-human ENCAB704OHJ DNA False 2018-01-26 ENCODE 1, 2 ENCFF325IMI 1052754 ENCODE Processing Pipeline 132d2957908199921b18af290d107e7e https://www.encodeproject.org/files/ENCFF409LJY/@@download/ENCFF409LJY.bigBed hg19 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF000QKT bigBed broadPeak peaks ENCSR000BME ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB7A-human ENCAB000AMM DNA see document see document False 2011-07-18 ENCODE 1 1 ENCFF001UMH 301144 Richard Myers, HAIB f9c0c691ca1929e1b70b49df49f57058 https://www.encodeproject.org/files/ENCFF000QKT/@@download/ENCFF000QKT.bigBed hg19 archived borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF000QKU bigBed broadPeak peaks ENCSR000BME ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB7A-human ENCAB000AMM DNA see document see document False 2011-07-18 ENCODE 2 1 ENCFF001UMI 1079521 Richard Myers, HAIB 2d16d19815f72cd9ea86359999de984b https://www.encodeproject.org/files/ENCFF000QKU/@@download/ENCFF000QKU.bigBed hg19 archived borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF000QKV bam alignments ENCSR000BME ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB7A-human ENCAB000AMM DNA see document see document False 2011-07-18 ENCODE 1 ENCFF000QLC 670606460 Richard Myers, HAIB 1b1bd63f5fc1052f9e1b4b19050bb6d3 https://www.encodeproject.org/files/ENCFF000QKV/@@download/ENCFF000QKV.bam hg19 archived borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF000QKW bigWig raw signal ENCSR000BME ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB7A-human ENCAB000AMM DNA see document see document False 2011-07-18 ENCODE 1 1 9308814 Richard Myers, HAIB e8178129a0d723472ae065af4c254b3d https://www.encodeproject.org/files/ENCFF000QKW/@@download/ENCFF000QKW.bigWig hg19 archived borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample, missing derived_from control insufficient read depth ENCFF000QKX bam alignments ENCSR000BME ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB7A-human ENCAB000AMM DNA see document see document False 2011-07-18 ENCODE 2 ENCFF000QLG 1070912704 Richard Myers, HAIB 5930d9f7f2c09d87f602a9e5145fed98 https://www.encodeproject.org/files/ENCFF000QKX/@@download/ENCFF000QKX.bam hg19 archived borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF000QKY bigWig raw signal ENCSR000BME ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB7A-human ENCAB000AMM DNA see document see document False 2011-07-18 ENCODE 2 1 50131825 Richard Myers, HAIB e9c027b21778c68cf5a2789013bf6af5 https://www.encodeproject.org/files/ENCFF000QKY/@@download/ENCFF000QKY.bigWig hg19 archived borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample, missing derived_from control insufficient read depth ENCFF000QLC fastq reads ENCSR000BME ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB7A-human ENCAB000AMM DNA see document see document False 2011-07-18 ENCODE 1 1 36 single-ended 618832603 Richard Myers, HAIB 1d9bf5b6afbe57efc07f5808ba038f82 https://www.encodeproject.org/files/ENCFF000QLC/@@download/ENCFF000QLC.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000QEX/ released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF000QLG fastq reads ENCSR000BME ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB7A-human ENCAB000AMM DNA see document see document False 2011-07-18 ENCODE 2 1 36 single-ended 1112162617 Richard Myers, HAIB 279b1cc74435f5272963dad002aa47bf https://www.encodeproject.org/files/ENCFF000QLG/@@download/ENCFF000QLG.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000QEX/ released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF001UMH bed broadPeak peaks ENCSR000BME ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB7A-human ENCAB000AMM DNA see document see document False 2011-07-18 ENCODE 1 1 152029 Richard Myers, HAIB a638098859d8abb82f51742a716f29d7 https://www.encodeproject.org/files/ENCFF001UMH/@@download/ENCFF001UMH.bed.gz hg19 archived borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample, missing derived_from control insufficient read depth ENCFF001UMI bed broadPeak peaks ENCSR000BME ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB7A-human ENCAB000AMM DNA see document see document False 2011-07-18 ENCODE 2 1 603742 Richard Myers, HAIB d3ee2bb1e8d1e70d5ce927e6acd95d20 https://www.encodeproject.org/files/ENCFF001UMI/@@download/ENCFF001UMI.bed.gz hg19 archived borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample, missing derived_from control insufficient read depth ENCFF002CMZ bed narrowPeak optimal idr thresholded peaks ENCSR000BME ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB7A-human ENCAB000AMM DNA see document see document False 2011-07-18 ENCODE 441449 ENCODE Consortium Analysis Working Group f57e8302a733b1d28d1d8fc097de34cd https://www.encodeproject.org/files/ENCFF002CMZ/@@download/ENCFF002CMZ.bed.gz hg19 archived borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample, missing derived_from control insufficient read depth ENCFF378XCF bigBed narrowPeak optimal idr thresholded peaks ENCSR000BME ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB7A-human ENCAB000AMM DNA see document see document False 2011-07-18 ENCODE ENCFF002CMZ 1104926 ENCODE Consortium 7125335bb7ee2dcb1332322a615111e1 https://www.encodeproject.org/files/ENCFF378XCF/@@download/ENCFF378XCF.bigBed hg19 archived borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF927KAH bam unfiltered alignments ENCSR000BME ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB7A-human ENCAB000AMM DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000QLC, ENCFF807MUK 820027638 ENCODE Processing Pipeline 212c1ec8961049cb70e90b9c3f12fe3b https://www.encodeproject.org/files/ENCFF927KAH/@@download/ENCFF927KAH.bam hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF859KGS bam alignments ENCSR000BME ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB7A-human ENCAB000AMM DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000QLC, ENCFF807MUK 438697653 ENCODE Processing Pipeline 54d59877e85df1a35f7d0ec4cf6f02a9 https://www.encodeproject.org/files/ENCFF859KGS/@@download/ENCFF859KGS.bam hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF642RRS bam unfiltered alignments ENCSR000BME ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB7A-human ENCAB000AMM DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000QLG, ENCFF807MUK 1379183545 ENCODE Processing Pipeline c8e2a66cc0e811602b8735d340b65eb0 https://www.encodeproject.org/files/ENCFF642RRS/@@download/ENCFF642RRS.bam hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF920CCJ bam alignments ENCSR000BME ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB7A-human ENCAB000AMM DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000QLG, ENCFF807MUK 691782077 ENCODE Processing Pipeline e311fa3ed5ebfe8934071940a176d24a https://www.encodeproject.org/files/ENCFF920CCJ/@@download/ENCFF920CCJ.bam hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF919LAP bam unfiltered alignments ENCSR000BME ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB7A-human ENCAB000AMM DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000QLC, ENCFF643CGH 821713349 ENCODE Processing Pipeline efa894d63021eb9bdf3046540d6dab75 https://www.encodeproject.org/files/ENCFF919LAP/@@download/ENCFF919LAP.bam GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF784SCN bam alignments ENCSR000BME ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB7A-human ENCAB000AMM DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000QLC, ENCFF643CGH 438447819 ENCODE Processing Pipeline b5973d93299d0c5813c759b060824952 https://www.encodeproject.org/files/ENCFF784SCN/@@download/ENCFF784SCN.bam GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF203KTA bam unfiltered alignments ENCSR000BME ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB7A-human ENCAB000AMM DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000QLG, ENCFF643CGH 1380732916 ENCODE Processing Pipeline ce22ff256f8ea55d7fa2c44d2ea6df3a https://www.encodeproject.org/files/ENCFF203KTA/@@download/ENCFF203KTA.bam GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF778PDI bam alignments ENCSR000BME ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB7A-human ENCAB000AMM DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000QLG, ENCFF643CGH 691292650 ENCODE Processing Pipeline e8964b8c48ed513a5bedcad1b6f8772c https://www.encodeproject.org/files/ENCFF778PDI/@@download/ENCFF778PDI.bam GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF123NAN bigBed narrowPeak peaks ENCSR000BME ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB7A-human ENCAB000AMM DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF101JWH 12717810 ENCODE Processing Pipeline 387037b87cf9bcbaa9a995769f00d575 https://www.encodeproject.org/files/ENCFF123NAN/@@download/ENCFF123NAN.bigBed hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF345YFV bed narrowPeak conservative idr thresholded peaks ENCSR000BME ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB7A-human ENCAB000AMM DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF001TDO, ENCFF101JWH, ENCFF412YTK, ENCFF644MVI 375088 ENCODE Processing Pipeline b39d11d380e03f50421cf04de59abee9 https://www.encodeproject.org/files/ENCFF345YFV/@@download/ENCFF345YFV.bed.gz hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF415GBQ bigWig signal p-value ENCSR000BME ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB7A-human ENCAB000AMM DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF750MIM, ENCFF859KGS, ENCFF920CCJ 191860357 ENCODE Processing Pipeline 268b457bc13712540fbc3c3b3c64b4a6 https://www.encodeproject.org/files/ENCFF415GBQ/@@download/ENCFF415GBQ.bigWig hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF457PSO bigWig fold change over control ENCSR000BME ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB7A-human ENCAB000AMM DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF750MIM, ENCFF859KGS, ENCFF920CCJ 376292347 ENCODE Processing Pipeline 34be4c636498f0fa27eae120d0ce3e7e https://www.encodeproject.org/files/ENCFF457PSO/@@download/ENCFF457PSO.bigWig hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF219ISV bigBed narrowPeak peaks ENCSR000BME ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB7A-human ENCAB000AMM DNA see document see document False 2011-07-18 ENCODE 1 ENCFF412YTK 9638875 ENCODE Processing Pipeline d486980ffc6e414df452a0ac3d8567c4 https://www.encodeproject.org/files/ENCFF219ISV/@@download/ENCFF219ISV.bigBed hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF412YTK bed narrowPeak peaks ENCSR000BME ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB7A-human ENCAB000AMM DNA see document see document False 2011-07-18 ENCODE 1 ENCFF750MIM, ENCFF859KGS 4043931 ENCODE Processing Pipeline d6b3c6ecd2f902f4c5f59525622b62da https://www.encodeproject.org/files/ENCFF412YTK/@@download/ENCFF412YTK.bed.gz hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF612PZL bigBed narrowPeak peaks ENCSR000BME ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB7A-human ENCAB000AMM DNA see document see document False 2011-07-18 ENCODE 2 ENCFF644MVI 12501354 ENCODE Processing Pipeline 1c3d3fc4c736f28ebc5e41cf7594a9de https://www.encodeproject.org/files/ENCFF612PZL/@@download/ENCFF612PZL.bigBed hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF706ISJ bed narrowPeak optimal idr thresholded peaks ENCSR000BME ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB7A-human ENCAB000AMM DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF001TDO, ENCFF101JWH, ENCFF412YTK, ENCFF644MVI 533464 ENCODE Processing Pipeline ee9d4887416c08e558ca9ce0f11d8c69 https://www.encodeproject.org/files/ENCFF706ISJ/@@download/ENCFF706ISJ.bed.gz hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF216ASX bigWig signal p-value ENCSR000BME ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB7A-human ENCAB000AMM DNA see document see document False 2011-07-18 ENCODE 2 ENCFF750MIM, ENCFF920CCJ 218870299 ENCODE Processing Pipeline 03792c06624aa35dd2c07ff57d1b656d https://www.encodeproject.org/files/ENCFF216ASX/@@download/ENCFF216ASX.bigWig hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF101JWH bed narrowPeak peaks ENCSR000BME ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB7A-human ENCAB000AMM DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF750MIM, ENCFF859KGS, ENCFF920CCJ 5825370 ENCODE Processing Pipeline b2c53b5b3a7acccd8ff47083c3ffb2dc https://www.encodeproject.org/files/ENCFF101JWH/@@download/ENCFF101JWH.bed.gz hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF783TOK bigBed narrowPeak optimal idr thresholded peaks ENCSR000BME ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB7A-human ENCAB000AMM DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF706ISJ 1161542 ENCODE Processing Pipeline ac6d014e8b88825b6202eb63d32e50ff https://www.encodeproject.org/files/ENCFF783TOK/@@download/ENCFF783TOK.bigBed hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF627GEZ bigWig signal p-value ENCSR000BME ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB7A-human ENCAB000AMM DNA see document see document False 2011-07-18 ENCODE 1 ENCFF750MIM, ENCFF859KGS 208211355 ENCODE Processing Pipeline ef79f9719d8d798ef761346f9f5e5466 https://www.encodeproject.org/files/ENCFF627GEZ/@@download/ENCFF627GEZ.bigWig hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF436RWF bigWig fold change over control ENCSR000BME ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB7A-human ENCAB000AMM DNA see document see document False 2011-07-18 ENCODE 1 ENCFF750MIM, ENCFF859KGS 186818731 ENCODE Processing Pipeline 2af9ae38bc28d77ac1fc9f35cb25df42 https://www.encodeproject.org/files/ENCFF436RWF/@@download/ENCFF436RWF.bigWig hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF722WMS bigWig fold change over control ENCSR000BME ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB7A-human ENCAB000AMM DNA see document see document False 2011-07-18 ENCODE 2 ENCFF750MIM, ENCFF920CCJ 230668529 ENCODE Processing Pipeline 8a19325662972c5362a70448996455d0 https://www.encodeproject.org/files/ENCFF722WMS/@@download/ENCFF722WMS.bigWig hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF644MVI bed narrowPeak peaks ENCSR000BME ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB7A-human ENCAB000AMM DNA see document see document False 2011-07-18 ENCODE 2 ENCFF750MIM, ENCFF920CCJ 5401132 ENCODE Processing Pipeline 2d9ed99c4264b18ec0eb5cc5200d7a3d https://www.encodeproject.org/files/ENCFF644MVI/@@download/ENCFF644MVI.bed.gz hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF695ASQ bigBed narrowPeak conservative idr thresholded peaks ENCSR000BME ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB7A-human ENCAB000AMM DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF345YFV 883070 ENCODE Processing Pipeline 152f3419a427bc33782d91c240697afe https://www.encodeproject.org/files/ENCFF695ASQ/@@download/ENCFF695ASQ.bigBed hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF004TYN bigWig signal p-value ENCSR000BME ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB7A-human ENCAB000AMM DNA see document see document False 2011-07-18 ENCODE 1 ENCFF772PJM, ENCFF784SCN 211103483 ENCODE Processing Pipeline 941408bfef87467305baa6e154083e55 https://www.encodeproject.org/files/ENCFF004TYN/@@download/ENCFF004TYN.bigWig GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF896ACB bigWig signal p-value ENCSR000BME ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB7A-human ENCAB000AMM DNA see document see document False 2011-07-18 ENCODE 2 ENCFF772PJM, ENCFF778PDI 214779289 ENCODE Processing Pipeline 2323a9782c82579b6a8908737aa9efbf https://www.encodeproject.org/files/ENCFF896ACB/@@download/ENCFF896ACB.bigWig GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF921NME bigWig signal p-value ENCSR000BME ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB7A-human ENCAB000AMM DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF772PJM, ENCFF778PDI, ENCFF784SCN 191595483 ENCODE Processing Pipeline 29f94bb349675e9fd63a289170531f1f https://www.encodeproject.org/files/ENCFF921NME/@@download/ENCFF921NME.bigWig GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF134GDG bigWig fold change over control ENCSR000BME ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB7A-human ENCAB000AMM DNA see document see document False 2011-07-18 ENCODE 1 ENCFF772PJM, ENCFF784SCN 190920155 ENCODE Processing Pipeline 51ff96a089084f231bc8ebacf0fab703 https://www.encodeproject.org/files/ENCFF134GDG/@@download/ENCFF134GDG.bigWig GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF108DKO bigWig fold change over control ENCSR000BME ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB7A-human ENCAB000AMM DNA see document see document False 2011-07-18 ENCODE 2 ENCFF772PJM, ENCFF778PDI 230750456 ENCODE Processing Pipeline 927fddbdb7a9c6ef8fef9803455f8045 https://www.encodeproject.org/files/ENCFF108DKO/@@download/ENCFF108DKO.bigWig GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF183DNX bigBed narrowPeak peaks ENCSR000BME ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB7A-human ENCAB000AMM DNA see document see document False 2011-07-18 ENCODE 1 ENCFF348XKJ 9608764 ENCODE Processing Pipeline 79968a4663d31dce1323471c3ca769d4 https://www.encodeproject.org/files/ENCFF183DNX/@@download/ENCFF183DNX.bigBed GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF348XKJ bed narrowPeak peaks ENCSR000BME ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB7A-human ENCAB000AMM DNA see document see document False 2011-07-18 ENCODE 1 ENCFF772PJM, ENCFF784SCN 4015381 ENCODE Processing Pipeline fff268e3ec4aad8fb0d9f0616aa0cbd9 https://www.encodeproject.org/files/ENCFF348XKJ/@@download/ENCFF348XKJ.bed.gz GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF193NOO bed narrowPeak peaks ENCSR000BME ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB7A-human ENCAB000AMM DNA see document see document False 2011-07-18 ENCODE 2 ENCFF772PJM, ENCFF778PDI 5345806 ENCODE Processing Pipeline 394514c5b53808ab5532cbfc0e2931ed https://www.encodeproject.org/files/ENCFF193NOO/@@download/ENCFF193NOO.bed.gz GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF482PBU bed narrowPeak conservative idr thresholded peaks ENCSR000BME ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB7A-human ENCAB000AMM DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF193NOO, ENCFF348XKJ, ENCFF419RSJ, ENCFF586QIP 373605 ENCODE Processing Pipeline bf7a3dd26551f2231aa18a2735e7f1dd https://www.encodeproject.org/files/ENCFF482PBU/@@download/ENCFF482PBU.bed.gz GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF961EMF bigWig fold change over control ENCSR000BME ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB7A-human ENCAB000AMM DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF772PJM, ENCFF778PDI, ENCFF784SCN 376814782 ENCODE Processing Pipeline 2f056394d8b0f4d31805e0dc85580f5e https://www.encodeproject.org/files/ENCFF961EMF/@@download/ENCFF961EMF.bigWig GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF245LRG bed narrowPeak optimal idr thresholded peaks ENCSR000BME ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB7A-human ENCAB000AMM DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF193NOO, ENCFF348XKJ, ENCFF419RSJ, ENCFF586QIP 530654 ENCODE Processing Pipeline 2c00a20ed88a81bb259b21e8faf4d309 https://www.encodeproject.org/files/ENCFF245LRG/@@download/ENCFF245LRG.bed.gz GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF287KON bigBed narrowPeak peaks ENCSR000BME ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB7A-human ENCAB000AMM DNA see document see document False 2011-07-18 ENCODE 2 ENCFF193NOO 12449569 ENCODE Processing Pipeline 013531a5fc8117c93577be073b180060 https://www.encodeproject.org/files/ENCFF287KON/@@download/ENCFF287KON.bigBed GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF093HJF bigBed narrowPeak peaks ENCSR000BME ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB7A-human ENCAB000AMM DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF586QIP 12715525 ENCODE Processing Pipeline f1bc54b9aead60bb589015156ee3f59c https://www.encodeproject.org/files/ENCFF093HJF/@@download/ENCFF093HJF.bigBed GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF586QIP bed narrowPeak peaks ENCSR000BME ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB7A-human ENCAB000AMM DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF772PJM, ENCFF778PDI, ENCFF784SCN 5817996 ENCODE Processing Pipeline 43bad6f80050c426813c06b0ebe8a806 https://www.encodeproject.org/files/ENCFF586QIP/@@download/ENCFF586QIP.bed.gz GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF666EAQ bigBed narrowPeak optimal idr thresholded peaks ENCSR000BME ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB7A-human ENCAB000AMM DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF245LRG 1155141 ENCODE Processing Pipeline cf041437baa3e22fc8c155245c51f62f https://www.encodeproject.org/files/ENCFF666EAQ/@@download/ENCFF666EAQ.bigBed GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF218PTA bigBed narrowPeak conservative idr thresholded peaks ENCSR000BME ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZBTB7A-human ENCAB000AMM DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF482PBU 881864 ENCODE Processing Pipeline 75063389716c2e2fd51efd4abcc8332b https://www.encodeproject.org/files/ENCFF218PTA/@@download/ENCFF218PTA.bigBed GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF752WRF fastq reads ENCSR635EXI ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZSCAN29-human ENCAB211EDR DNA False 2017-11-20 ENCODE 1 1 100 paired-ended 1 ENCFF761OSS 2021544541 Michael Snyder, Stanford d8a5a068bc826d2a81b384924e7f7582 https://www.encodeproject.org/files/ENCFF752WRF/@@download/ENCFF752WRF.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFF/ released experiment not submitted to GEO ENCFF761OSS fastq reads ENCSR635EXI ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZSCAN29-human ENCAB211EDR DNA False 2017-11-20 ENCODE 1 1 100 paired-ended 2 ENCFF752WRF 2082712199 Michael Snyder, Stanford df24a0371db55eb08fd0d43d45b50f98 https://www.encodeproject.org/files/ENCFF761OSS/@@download/ENCFF761OSS.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFH/ released experiment not submitted to GEO ENCFF949FMK bam alignments ENCSR635EXI ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZSCAN29-human ENCAB211EDR DNA False 2017-11-20 ENCODE 1 100 ENCFF752WRF, ENCFF761OSS, ENCFF807MUK 3780307148 ENCODE Processing Pipeline 0f8d3fa5769f1bf2118efc819984427e https://www.encodeproject.org/files/ENCFF949FMK/@@download/ENCFF949FMK.bam hg19 released experiment not submitted to GEO ENCFF684YTI fastq reads ENCSR635EXI ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZSCAN29-human ENCAB211EDR DNA False 2017-11-20 ENCODE 3 1 101 paired-ended 1 ENCFF412VSI 3975367499 Michael Snyder, Stanford b4bc1238bd36a3407e49ec2b54d887b9 https://www.encodeproject.org/files/ENCFF684YTI/@@download/ENCFF684YTI.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFD/ released experiment not submitted to GEO ENCFF412VSI fastq reads ENCSR635EXI ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZSCAN29-human ENCAB211EDR DNA False 2017-11-20 ENCODE 3 1 101 paired-ended 2 ENCFF684YTI 3960630188 Michael Snyder, Stanford a0d38ccb6387e5cdd967b64f23127b27 https://www.encodeproject.org/files/ENCFF412VSI/@@download/ENCFF412VSI.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFA/ released experiment not submitted to GEO ENCFF077WZY bam alignments ENCSR635EXI ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZSCAN29-human ENCAB211EDR DNA False 2017-11-20 ENCODE 1 100 ENCFF643CGH, ENCFF752WRF, ENCFF761OSS 3782017955 ENCODE Processing Pipeline b614062bb3e148809baa680763191432 https://www.encodeproject.org/files/ENCFF077WZY/@@download/ENCFF077WZY.bam GRCh38 released experiment not submitted to GEO ENCFF726DFP bam unfiltered alignments ENCSR635EXI ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZSCAN29-human ENCAB211EDR DNA False 2017-11-20 ENCODE 1 100 ENCFF643CGH, ENCFF752WRF, ENCFF761OSS 4524207950 ENCODE Processing Pipeline 6d738867d8b88b31546bbec81b23c865 https://www.encodeproject.org/files/ENCFF726DFP/@@download/ENCFF726DFP.bam GRCh38 released experiment not submitted to GEO ENCFF063HJG bam unfiltered alignments ENCSR635EXI ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZSCAN29-human ENCAB211EDR DNA False 2017-11-20 ENCODE 3 101 ENCFF412VSI, ENCFF643CGH, ENCFF684YTI 7539742182 ENCODE Processing Pipeline 01c828cd460251983c98fd7e37b5dc3d https://www.encodeproject.org/files/ENCFF063HJG/@@download/ENCFF063HJG.bam GRCh38 released experiment not submitted to GEO ENCFF592NKN bam alignments ENCSR635EXI ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZSCAN29-human ENCAB211EDR DNA False 2017-11-20 ENCODE 3 101 ENCFF412VSI, ENCFF643CGH, ENCFF684YTI 6529987744 ENCODE Processing Pipeline a199dea795bb27c3beabb57321c16566 https://www.encodeproject.org/files/ENCFF592NKN/@@download/ENCFF592NKN.bam GRCh38 released experiment not submitted to GEO ENCFF468MXQ bam alignments ENCSR635EXI ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZSCAN29-human ENCAB211EDR DNA False 2017-11-20 ENCODE 3 101 ENCFF412VSI, ENCFF684YTI, ENCFF807MUK 6528672768 ENCODE Processing Pipeline d5d92b6829b1027cc521557a5de9462d https://www.encodeproject.org/files/ENCFF468MXQ/@@download/ENCFF468MXQ.bam hg19 released experiment not submitted to GEO ENCFF576FLY bam unfiltered alignments ENCSR635EXI ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZSCAN29-human ENCAB211EDR DNA False 2017-11-20 ENCODE 3 101 ENCFF412VSI, ENCFF684YTI, ENCFF807MUK 7530897648 ENCODE Processing Pipeline 095b6818bbca18f2da672f12c1e361e1 https://www.encodeproject.org/files/ENCFF576FLY/@@download/ENCFF576FLY.bam hg19 released experiment not submitted to GEO ENCFF763CRS bed narrowPeak peaks ENCSR635EXI ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZSCAN29-human ENCAB211EDR DNA False 2017-11-20 ENCODE 1 ENCFF077WZY, ENCFF910IKB 6607522 ENCODE Processing Pipeline d5ffa2cf4bff4b7b70ac35873a09eedf https://www.encodeproject.org/files/ENCFF763CRS/@@download/ENCFF763CRS.bed.gz GRCh38 released experiment not submitted to GEO ENCFF509XKO bigWig signal p-value ENCSR635EXI ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZSCAN29-human ENCAB211EDR DNA False 2017-11-20 ENCODE 1 ENCFF077WZY, ENCFF910IKB 1122564292 ENCODE Processing Pipeline d22392de09a23e06cce37711ea130b5d https://www.encodeproject.org/files/ENCFF509XKO/@@download/ENCFF509XKO.bigWig GRCh38 released experiment not submitted to GEO ENCFF963EIT bigWig fold change over control ENCSR635EXI ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZSCAN29-human ENCAB211EDR DNA False 2017-11-20 ENCODE 1, 3 ENCFF077WZY, ENCFF227IZS, ENCFF592NKN, ENCFF910IKB 2311718553 ENCODE Processing Pipeline 694418e2a0646a495e99b7607bbeae23 https://www.encodeproject.org/files/ENCFF963EIT/@@download/ENCFF963EIT.bigWig GRCh38 released experiment not submitted to GEO ENCFF695LCK bed narrowPeak peaks ENCSR635EXI ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZSCAN29-human ENCAB211EDR DNA False 2017-11-20 ENCODE 1, 3 ENCFF077WZY, ENCFF227IZS, ENCFF592NKN, ENCFF910IKB 7195293 ENCODE Processing Pipeline 0e1ea22bf01046ba412bbd4829735a05 https://www.encodeproject.org/files/ENCFF695LCK/@@download/ENCFF695LCK.bed.gz GRCh38 released experiment not submitted to GEO ENCFF177PAY bigBed narrowPeak peaks ENCSR635EXI ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZSCAN29-human ENCAB211EDR DNA False 2017-11-20 ENCODE 1, 3 ENCFF695LCK 13129706 ENCODE Processing Pipeline f928260c8d862c1549b249548995fb7f https://www.encodeproject.org/files/ENCFF177PAY/@@download/ENCFF177PAY.bigBed GRCh38 released experiment not submitted to GEO ENCFF848ONP bigBed narrowPeak conservative idr thresholded peaks ENCSR635EXI ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZSCAN29-human ENCAB211EDR DNA False 2017-11-20 ENCODE 1, 3 ENCFF529AJE 204285 ENCODE Processing Pipeline bb398e8493251157af26737b438bb4c9 https://www.encodeproject.org/files/ENCFF848ONP/@@download/ENCFF848ONP.bigBed GRCh38 released experiment not submitted to GEO ENCFF057PZJ bigWig fold change over control ENCSR635EXI ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZSCAN29-human ENCAB211EDR DNA False 2017-11-20 ENCODE 1 ENCFF077WZY, ENCFF910IKB 1113423693 ENCODE Processing Pipeline c3d42365936e9e2e726e5ceb26bff2b9 https://www.encodeproject.org/files/ENCFF057PZJ/@@download/ENCFF057PZJ.bigWig GRCh38 released experiment not submitted to GEO ENCFF109VHO bigBed narrowPeak optimal idr thresholded peaks ENCSR635EXI ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZSCAN29-human ENCAB211EDR DNA False 2017-11-20 ENCODE 1, 3 ENCFF979GFF 247313 ENCODE Processing Pipeline 9a096302b213fa4b4d82902b4b6890c6 https://www.encodeproject.org/files/ENCFF109VHO/@@download/ENCFF109VHO.bigBed GRCh38 released experiment not submitted to GEO ENCFF864BPZ bigWig signal p-value ENCSR635EXI ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZSCAN29-human ENCAB211EDR DNA False 2017-11-20 ENCODE 3 ENCFF227IZS, ENCFF592NKN, ENCFF910IKB 1837344786 ENCODE Processing Pipeline 33a2a0d3ab4f492dbe4ee6a2f83318bb https://www.encodeproject.org/files/ENCFF864BPZ/@@download/ENCFF864BPZ.bigWig GRCh38 released experiment not submitted to GEO ENCFF213KDE bed narrowPeak peaks ENCSR635EXI ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZSCAN29-human ENCAB211EDR DNA False 2017-11-20 ENCODE 3 ENCFF227IZS, ENCFF592NKN, ENCFF910IKB 6868277 ENCODE Processing Pipeline 3dd539b2b1f3e7e4a527028b4286de15 https://www.encodeproject.org/files/ENCFF213KDE/@@download/ENCFF213KDE.bed.gz GRCh38 released experiment not submitted to GEO ENCFF979GFF bed narrowPeak optimal idr thresholded peaks ENCSR635EXI ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZSCAN29-human ENCAB211EDR DNA False 2017-11-20 ENCODE 1, 3 ENCFF213KDE, ENCFF419RSJ, ENCFF695LCK, ENCFF763CRS 102256 ENCODE Processing Pipeline 2b592e6a75fb28ad53ac77be04c8ff20 https://www.encodeproject.org/files/ENCFF979GFF/@@download/ENCFF979GFF.bed.gz GRCh38 released experiment not submitted to GEO ENCFF792OCL bigWig signal p-value ENCSR635EXI ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZSCAN29-human ENCAB211EDR DNA False 2017-11-20 ENCODE 1, 3 ENCFF077WZY, ENCFF227IZS, ENCFF592NKN, ENCFF910IKB 2042607741 ENCODE Processing Pipeline 094880fe8c9c7b152686b77f17cba83f https://www.encodeproject.org/files/ENCFF792OCL/@@download/ENCFF792OCL.bigWig GRCh38 released experiment not submitted to GEO ENCFF948TRW bigWig fold change over control ENCSR635EXI ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZSCAN29-human ENCAB211EDR DNA False 2017-11-20 ENCODE 3 ENCFF227IZS, ENCFF592NKN, ENCFF910IKB 1952522950 ENCODE Processing Pipeline 4399faa1edcec5dde9389a0699044078 https://www.encodeproject.org/files/ENCFF948TRW/@@download/ENCFF948TRW.bigWig GRCh38 released experiment not submitted to GEO ENCFF567GMN bigBed narrowPeak peaks ENCSR635EXI ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZSCAN29-human ENCAB211EDR DNA False 2017-11-20 ENCODE 1 ENCFF763CRS 13304423 ENCODE Processing Pipeline 6602185780b00f90fa0da3351d9ab045 https://www.encodeproject.org/files/ENCFF567GMN/@@download/ENCFF567GMN.bigBed GRCh38 released experiment not submitted to GEO ENCFF400VUF bigBed narrowPeak peaks ENCSR635EXI ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZSCAN29-human ENCAB211EDR DNA False 2017-11-20 ENCODE 3 ENCFF213KDE 11217728 ENCODE Processing Pipeline ae3a301f8cd9e7569da330af85c70ee5 https://www.encodeproject.org/files/ENCFF400VUF/@@download/ENCFF400VUF.bigBed GRCh38 released experiment not submitted to GEO ENCFF529AJE bed narrowPeak conservative idr thresholded peaks ENCSR635EXI ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZSCAN29-human ENCAB211EDR DNA False 2017-11-20 ENCODE 1, 3 ENCFF213KDE, ENCFF419RSJ, ENCFF695LCK, ENCFF763CRS 75052 ENCODE Processing Pipeline d9ee38d656ac77d33d9def012ac547c9 https://www.encodeproject.org/files/ENCFF529AJE/@@download/ENCFF529AJE.bed.gz GRCh38 released experiment not submitted to GEO ENCFF607JKX bam unfiltered alignments ENCSR635EXI ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZSCAN29-human ENCAB211EDR DNA False 2017-11-20 ENCODE 1 100 ENCFF752WRF, ENCFF761OSS, ENCFF807MUK 4518754782 ENCODE Processing Pipeline 291a6dc5c35cdb35701613402e1b28b6 https://www.encodeproject.org/files/ENCFF607JKX/@@download/ENCFF607JKX.bam hg19 released experiment not submitted to GEO ENCFF098RVJ bam alignments ENCSR635EXI ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZSCAN29-human ENCAB211EDR DNA False 2017-11-20 ENCODE 1 100 ENCFF752WRF, ENCFF761OSS, ENCFF807MUK 3780307176 ENCODE Processing Pipeline b2fa64dc8e9179e757bd17c0d3997e39 https://www.encodeproject.org/files/ENCFF098RVJ/@@download/ENCFF098RVJ.bam hg19 released experiment not submitted to GEO ENCFF028OLZ bigWig signal p-value ENCSR635EXI ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZSCAN29-human ENCAB211EDR DNA False 2017-11-20 ENCODE 1 ENCFF098RVJ, ENCFF581ZJL 1063393303 ENCODE Processing Pipeline 90f42b92b4339b928c2a15af12e8023e https://www.encodeproject.org/files/ENCFF028OLZ/@@download/ENCFF028OLZ.bigWig hg19 released experiment not submitted to GEO ENCFF788MZM bigWig fold change over control ENCSR635EXI ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZSCAN29-human ENCAB211EDR DNA False 2017-11-20 ENCODE 1 ENCFF098RVJ, ENCFF581ZJL 1110005789 ENCODE Processing Pipeline 7032fe1aaf1aedd2cad43e0d2017fd61 https://www.encodeproject.org/files/ENCFF788MZM/@@download/ENCFF788MZM.bigWig hg19 released experiment not submitted to GEO ENCFF996UAE bigWig signal p-value ENCSR635EXI ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZSCAN29-human ENCAB211EDR DNA False 2017-11-20 ENCODE 3 ENCFF051LWI, ENCFF468MXQ, ENCFF581ZJL 1741531409 ENCODE Processing Pipeline 1d093cf92bbbc675e9931204e45ceea2 https://www.encodeproject.org/files/ENCFF996UAE/@@download/ENCFF996UAE.bigWig hg19 released experiment not submitted to GEO ENCFF692CVG bigWig signal p-value ENCSR635EXI ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZSCAN29-human ENCAB211EDR DNA False 2017-11-20 ENCODE 1, 3 ENCFF051LWI, ENCFF098RVJ, ENCFF468MXQ, ENCFF581ZJL 2273575772 ENCODE Processing Pipeline 36def076b5e5c9971d868203cc8480a5 https://www.encodeproject.org/files/ENCFF692CVG/@@download/ENCFF692CVG.bigWig hg19 released experiment not submitted to GEO ENCFF792SGT bigWig fold change over control ENCSR635EXI ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZSCAN29-human ENCAB211EDR DNA False 2017-11-20 ENCODE 3 ENCFF051LWI, ENCFF468MXQ, ENCFF581ZJL 1925475740 ENCODE Processing Pipeline a0898cee08e6e520fbe239c57b76f223 https://www.encodeproject.org/files/ENCFF792SGT/@@download/ENCFF792SGT.bigWig hg19 released experiment not submitted to GEO ENCFF025DGW bigWig fold change over control ENCSR635EXI ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZSCAN29-human ENCAB211EDR DNA False 2017-11-20 ENCODE 1, 3 ENCFF051LWI, ENCFF098RVJ, ENCFF468MXQ, ENCFF581ZJL 2296280638 ENCODE Processing Pipeline 91eb729eb44e63cec1cb128c8d7baa06 https://www.encodeproject.org/files/ENCFF025DGW/@@download/ENCFF025DGW.bigWig hg19 released experiment not submitted to GEO ENCFF259GFJ bed narrowPeak peaks ENCSR635EXI ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZSCAN29-human ENCAB211EDR DNA False 2017-11-20 ENCODE 1 ENCFF098RVJ, ENCFF581ZJL 6608166 ENCODE Processing Pipeline be6550ae5866d12ab52518bf4a4365df https://www.encodeproject.org/files/ENCFF259GFJ/@@download/ENCFF259GFJ.bed.gz hg19 released experiment not submitted to GEO ENCFF959BCM bed narrowPeak peaks ENCSR635EXI ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZSCAN29-human ENCAB211EDR DNA False 2017-11-20 ENCODE 3 ENCFF051LWI, ENCFF468MXQ, ENCFF581ZJL 6867581 ENCODE Processing Pipeline 39927921f223a5a170cd617cb04b0f8f https://www.encodeproject.org/files/ENCFF959BCM/@@download/ENCFF959BCM.bed.gz hg19 released experiment not submitted to GEO ENCFF301MWW bed narrowPeak peaks ENCSR635EXI ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZSCAN29-human ENCAB211EDR DNA False 2017-11-20 ENCODE 1, 3 ENCFF051LWI, ENCFF098RVJ, ENCFF468MXQ, ENCFF581ZJL 7188444 ENCODE Processing Pipeline 7b522e0e03771150f6a44cee014b09d0 https://www.encodeproject.org/files/ENCFF301MWW/@@download/ENCFF301MWW.bed.gz hg19 released experiment not submitted to GEO ENCFF036WCQ bigBed narrowPeak peaks ENCSR635EXI ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZSCAN29-human ENCAB211EDR DNA False 2017-11-20 ENCODE 1 ENCFF259GFJ 13290904 ENCODE Processing Pipeline ecb0a2b3b441a81f9e405fabff5d2090 https://www.encodeproject.org/files/ENCFF036WCQ/@@download/ENCFF036WCQ.bigBed hg19 released experiment not submitted to GEO ENCFF251BRV bigBed narrowPeak peaks ENCSR635EXI ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZSCAN29-human ENCAB211EDR DNA False 2017-11-20 ENCODE 3 ENCFF959BCM 11203139 ENCODE Processing Pipeline 385b8a440118e0bde9bc05b6a74bb34f https://www.encodeproject.org/files/ENCFF251BRV/@@download/ENCFF251BRV.bigBed hg19 released experiment not submitted to GEO ENCFF132RZH bigBed narrowPeak peaks ENCSR635EXI ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZSCAN29-human ENCAB211EDR DNA False 2017-11-20 ENCODE 1, 3 ENCFF301MWW 13129105 ENCODE Processing Pipeline b46406764ace0aae48d4acc0b16d595b https://www.encodeproject.org/files/ENCFF132RZH/@@download/ENCFF132RZH.bigBed hg19 released experiment not submitted to GEO ENCFF609XKW bed narrowPeak conservative idr thresholded peaks ENCSR635EXI ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZSCAN29-human ENCAB211EDR DNA False 2017-11-20 ENCODE 1, 3 ENCFF001TDO, ENCFF259GFJ, ENCFF301MWW, ENCFF959BCM 74242 ENCODE Processing Pipeline 400112d6c2d97f1c4650512716dc15da https://www.encodeproject.org/files/ENCFF609XKW/@@download/ENCFF609XKW.bed.gz hg19 released experiment not submitted to GEO ENCFF460OQH bigBed narrowPeak conservative idr thresholded peaks ENCSR635EXI ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZSCAN29-human ENCAB211EDR DNA False 2017-11-20 ENCODE 1, 3 ENCFF609XKW 201671 ENCODE Processing Pipeline 11b87a94e592f69a02841c564f564a67 https://www.encodeproject.org/files/ENCFF460OQH/@@download/ENCFF460OQH.bigBed hg19 released experiment not submitted to GEO ENCFF303PMJ bed narrowPeak optimal idr thresholded peaks ENCSR635EXI ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZSCAN29-human ENCAB211EDR DNA False 2017-11-20 ENCODE 1, 3 ENCFF001TDO, ENCFF259GFJ, ENCFF301MWW, ENCFF959BCM 105003 ENCODE Processing Pipeline d1ef6c0a0056c7d72b674fe178969dd2 https://www.encodeproject.org/files/ENCFF303PMJ/@@download/ENCFF303PMJ.bed.gz hg19 released experiment not submitted to GEO ENCFF789MTT bigBed narrowPeak optimal idr thresholded peaks ENCSR635EXI ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZSCAN29-human ENCAB211EDR DNA False 2017-11-20 ENCODE 1, 3 ENCFF303PMJ 249803 ENCODE Processing Pipeline 42f8c188f595e68905833233e528a6f9 https://www.encodeproject.org/files/ENCFF789MTT/@@download/ENCFF789MTT.bigBed hg19 released experiment not submitted to GEO ENCFF000PVN bam alignments ENCSR000BNU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF3-human ENCAB000ADZ DNA see document see document False 2011-07-18 ENCODE 1 ENCFF000PWC 1240281330 Richard Myers, HAIB b0716bd81170efe1fd0a8e411fb669d8 https://www.encodeproject.org/files/ENCFF000PVN/@@download/ENCFF000PVN.bam hg19 archived borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF000PVO bigBed broadPeak peaks ENCSR000BNU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF3-human ENCAB000ADZ DNA see document see document False 2011-07-18 ENCODE 1 1 ENCFF001UIW 302804 Richard Myers, HAIB 86ed02350d76fe7b223e6928fbdb3912 https://www.encodeproject.org/files/ENCFF000PVO/@@download/ENCFF000PVO.bigBed hg19 archived borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF000PVQ bigBed broadPeak peaks ENCSR000BNU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF3-human ENCAB000ADZ DNA see document see document False 2011-07-18 ENCODE 2 1 ENCFF001UIY 448130 Richard Myers, HAIB f5fb7ff9e1ec4cab381400a170232012 https://www.encodeproject.org/files/ENCFF000PVQ/@@download/ENCFF000PVQ.bigBed hg19 archived borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF000PVR bam alignments ENCSR000BNU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF3-human ENCAB000ADZ DNA see document see document False 2011-07-18 ENCODE 2 ENCFF000PWA 973300680 Richard Myers, HAIB 56ab039797ad4b71211e211ebc837ae0 https://www.encodeproject.org/files/ENCFF000PVR/@@download/ENCFF000PVR.bam hg19 archived borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF000PVS bigWig raw signal ENCSR000BNU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF3-human ENCAB000ADZ DNA see document see document False 2011-07-18 ENCODE 1 1 18255912 Richard Myers, HAIB fb3b9dc8e85636a3a1226d22f8c1dbec https://www.encodeproject.org/files/ENCFF000PVS/@@download/ENCFF000PVS.bigWig hg19 archived borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample, missing derived_from control insufficient read depth ENCFF000PVU bigWig raw signal ENCSR000BNU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF3-human ENCAB000ADZ DNA see document see document False 2011-07-18 ENCODE 2 1 21800354 Richard Myers, HAIB 4ac1cd7306a68743492173e12c2c827e https://www.encodeproject.org/files/ENCFF000PVU/@@download/ENCFF000PVU.bigWig hg19 archived borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample, missing derived_from control insufficient read depth ENCFF000PWA fastq reads ENCSR000BNU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF3-human ENCAB000ADZ DNA see document see document False 2011-07-18 ENCODE 2 1 36 single-ended 969133678 Richard Myers, HAIB 086560bad3ea9a7d18174a8eaa67fc4e https://www.encodeproject.org/files/ENCFF000PWA/@@download/ENCFF000PWA.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000QEX/ released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF000PWC fastq reads ENCSR000BNU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF3-human ENCAB000ADZ DNA see document see document False 2011-07-18 ENCODE 1 1 36 single-ended 1119632052 Richard Myers, HAIB 42dd51a08ec18fc8f911366cebab1cd8 https://www.encodeproject.org/files/ENCFF000PWC/@@download/ENCFF000PWC.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000QEX/ released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF001UIW bed broadPeak peaks ENCSR000BNU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF3-human ENCAB000ADZ DNA see document see document False 2011-07-18 ENCODE 1 1 177639 Richard Myers, HAIB 6e8f85d3ab428ef95e3382237b1b2419 https://www.encodeproject.org/files/ENCFF001UIW/@@download/ENCFF001UIW.bed.gz hg19 archived borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample, missing derived_from control insufficient read depth ENCFF001UIY bed broadPeak peaks ENCSR000BNU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF3-human ENCAB000ADZ DNA see document see document False 2011-07-18 ENCODE 2 1 218408 Richard Myers, HAIB f8be948c85a0facd73902d03412464c0 https://www.encodeproject.org/files/ENCFF001UIY/@@download/ENCFF001UIY.bed.gz hg19 archived borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample, missing derived_from control insufficient read depth ENCFF002CLN bed narrowPeak optimal idr thresholded peaks ENCSR000BNU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF3-human ENCAB000ADZ DNA see document see document False 2011-07-18 ENCODE 312249 ENCODE Consortium Analysis Working Group d1af167591078c356c4ff1f625297619 https://www.encodeproject.org/files/ENCFF002CLN/@@download/ENCFF002CLN.bed.gz hg19 archived borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample, missing derived_from control insufficient read depth ENCFF968XJD bigBed narrowPeak optimal idr thresholded peaks ENCSR000BNU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF3-human ENCAB000ADZ DNA see document see document False 2011-07-18 ENCODE ENCFF002CLN 622854 ENCODE Consortium 780afa7d0324a4b3680a92a240e56202 https://www.encodeproject.org/files/ENCFF968XJD/@@download/ENCFF968XJD.bigBed hg19 archived borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF917RFP bam unfiltered alignments ENCSR000BNU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF3-human ENCAB000ADZ DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000PWA, ENCFF643CGH 1152325423 ENCODE Processing Pipeline 9ada609b03b7810758b863901298df22 https://www.encodeproject.org/files/ENCFF917RFP/@@download/ENCFF917RFP.bam GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF438DHS bam alignments ENCSR000BNU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF3-human ENCAB000ADZ DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000PWA, ENCFF643CGH 612365247 ENCODE Processing Pipeline eed32ba312b25c9564c5e5f9d0d4d3d1 https://www.encodeproject.org/files/ENCFF438DHS/@@download/ENCFF438DHS.bam GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF308RGN bam alignments ENCSR000BNU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF3-human ENCAB000ADZ DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000PWC, ENCFF643CGH 914277873 ENCODE Processing Pipeline 2130fc207690f965c7a70e73e6ee2d25 https://www.encodeproject.org/files/ENCFF308RGN/@@download/ENCFF308RGN.bam GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF005MDO bam unfiltered alignments ENCSR000BNU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF3-human ENCAB000ADZ DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000PWC, ENCFF643CGH 1510432253 ENCODE Processing Pipeline 4822bd73719d863c15ad918833679a8e https://www.encodeproject.org/files/ENCFF005MDO/@@download/ENCFF005MDO.bam GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF727DWE bam unfiltered alignments ENCSR000BNU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF3-human ENCAB000ADZ DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000PWA, ENCFF807MUK 1150169255 ENCODE Processing Pipeline 4ebd526a66f2a7eafea475cbe1ea74a2 https://www.encodeproject.org/files/ENCFF727DWE/@@download/ENCFF727DWE.bam hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF849WYX bam alignments ENCSR000BNU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF3-human ENCAB000ADZ DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000PWA, ENCFF807MUK 612766004 ENCODE Processing Pipeline 2026e3ba49cd1962705f2941d8b9f7a5 https://www.encodeproject.org/files/ENCFF849WYX/@@download/ENCFF849WYX.bam hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF501RLG bam unfiltered alignments ENCSR000BNU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF3-human ENCAB000ADZ DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000PWC, ENCFF807MUK 1507713767 ENCODE Processing Pipeline 1ab19b47462c39f6de0662e520f828c9 https://www.encodeproject.org/files/ENCFF501RLG/@@download/ENCFF501RLG.bam hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF747HGM bam alignments ENCSR000BNU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF3-human ENCAB000ADZ DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000PWC, ENCFF807MUK 914786444 ENCODE Processing Pipeline 65d015a573436527cfbb02c83685506f https://www.encodeproject.org/files/ENCFF747HGM/@@download/ENCFF747HGM.bam hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF281HBB bigWig signal p-value ENCSR000BNU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF3-human ENCAB000ADZ DNA see document see document False 2011-07-18 ENCODE 2 ENCFF438DHS, ENCFF772PJM 214904341 ENCODE Processing Pipeline 65b58222adc956d921614e5e4b089004 https://www.encodeproject.org/files/ENCFF281HBB/@@download/ENCFF281HBB.bigWig GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF932PBI bigWig signal p-value ENCSR000BNU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF3-human ENCAB000ADZ DNA see document see document False 2011-07-18 ENCODE 1 ENCFF308RGN, ENCFF772PJM 201969144 ENCODE Processing Pipeline e32b421c586c1eb836f5cd2d7f62c0a5 https://www.encodeproject.org/files/ENCFF932PBI/@@download/ENCFF932PBI.bigWig GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF507KDS bigWig signal p-value ENCSR000BNU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF3-human ENCAB000ADZ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF308RGN, ENCFF438DHS, ENCFF772PJM 186713116 ENCODE Processing Pipeline 3663075a3824d5e632c1dcd0a08f9442 https://www.encodeproject.org/files/ENCFF507KDS/@@download/ENCFF507KDS.bigWig GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF862YKN bigWig fold change over control ENCSR000BNU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF3-human ENCAB000ADZ DNA see document see document False 2011-07-18 ENCODE 1 ENCFF308RGN, ENCFF772PJM 320179376 ENCODE Processing Pipeline c8aa2dc15a0c63341fee2e926c07c61f https://www.encodeproject.org/files/ENCFF862YKN/@@download/ENCFF862YKN.bigWig GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF102FPL bigWig fold change over control ENCSR000BNU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF3-human ENCAB000ADZ DNA see document see document False 2011-07-18 ENCODE 2 ENCFF438DHS, ENCFF772PJM 244670503 ENCODE Processing Pipeline eab076b1f60c537497cb1aa055b74cfd https://www.encodeproject.org/files/ENCFF102FPL/@@download/ENCFF102FPL.bigWig GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF550IIR bigBed narrowPeak peaks ENCSR000BNU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF3-human ENCAB000ADZ DNA see document see document False 2011-07-18 ENCODE 1 ENCFF980RKS 10239110 ENCODE Processing Pipeline 7fff50c28712d161e380b55bd2b05568 https://www.encodeproject.org/files/ENCFF550IIR/@@download/ENCFF550IIR.bigBed GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF011BTB bigBed narrowPeak peaks ENCSR000BNU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF3-human ENCAB000ADZ DNA see document see document False 2011-07-18 ENCODE 2 ENCFF145FYQ 2045757 ENCODE Processing Pipeline bbdd2ffe220c5da0b7f42c58823ca279 https://www.encodeproject.org/files/ENCFF011BTB/@@download/ENCFF011BTB.bigBed GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF650KQD bed narrowPeak peaks ENCSR000BNU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF3-human ENCAB000ADZ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF308RGN, ENCFF438DHS, ENCFF772PJM 5153728 ENCODE Processing Pipeline 7f5b53d2cccfd07ff26ce65cdd16f86a https://www.encodeproject.org/files/ENCFF650KQD/@@download/ENCFF650KQD.bed.gz GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF980RKS bed narrowPeak peaks ENCSR000BNU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF3-human ENCAB000ADZ DNA see document see document False 2011-07-18 ENCODE 1 ENCFF308RGN, ENCFF772PJM 4304832 ENCODE Processing Pipeline 3801d07b163dae30363e2fb2af8a73e3 https://www.encodeproject.org/files/ENCFF980RKS/@@download/ENCFF980RKS.bed.gz GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF364WAT bed narrowPeak conservative idr thresholded peaks ENCSR000BNU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF3-human ENCAB000ADZ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF145FYQ, ENCFF419RSJ, ENCFF650KQD, ENCFF980RKS 7082 ENCODE Processing Pipeline 43434f95dab24f3f53d2e33b299e6116 https://www.encodeproject.org/files/ENCFF364WAT/@@download/ENCFF364WAT.bed.gz GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF619WVY bigWig fold change over control ENCSR000BNU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF3-human ENCAB000ADZ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF308RGN, ENCFF438DHS, ENCFF772PJM 504874826 ENCODE Processing Pipeline 64d97b0b6b4857ae7eeef4e2d0905518 https://www.encodeproject.org/files/ENCFF619WVY/@@download/ENCFF619WVY.bigWig GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF145FYQ bed narrowPeak peaks ENCSR000BNU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF3-human ENCAB000ADZ DNA see document see document False 2011-07-18 ENCODE 2 ENCFF438DHS, ENCFF772PJM 934563 ENCODE Processing Pipeline a1f72cc6c4bbbf5378d73c25d6760d80 https://www.encodeproject.org/files/ENCFF145FYQ/@@download/ENCFF145FYQ.bed.gz GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF615EDN bigBed narrowPeak peaks ENCSR000BNU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF3-human ENCAB000ADZ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF650KQD 10795762 ENCODE Processing Pipeline f442d97bb4900568a2eff163084248e4 https://www.encodeproject.org/files/ENCFF615EDN/@@download/ENCFF615EDN.bigBed GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF467WOR bed narrowPeak optimal idr thresholded peaks ENCSR000BNU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF3-human ENCAB000ADZ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF145FYQ, ENCFF419RSJ, ENCFF650KQD, ENCFF980RKS 131560 ENCODE Processing Pipeline 0eea4ec13ed728c59950c45219d7f880 https://www.encodeproject.org/files/ENCFF467WOR/@@download/ENCFF467WOR.bed.gz GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF787GVU bigBed narrowPeak optimal idr thresholded peaks ENCSR000BNU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF3-human ENCAB000ADZ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF467WOR 250881 ENCODE Processing Pipeline 2bf30aae32668b231ba6d4efaf8a745a https://www.encodeproject.org/files/ENCFF787GVU/@@download/ENCFF787GVU.bigBed GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF472AQO bigBed narrowPeak conservative idr thresholded peaks ENCSR000BNU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF3-human ENCAB000ADZ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF364WAT 46544 ENCODE Processing Pipeline b93a4e3bc08fa7f030af9dc71d7e068c https://www.encodeproject.org/files/ENCFF472AQO/@@download/ENCFF472AQO.bigBed GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF301NGC bigWig signal p-value ENCSR000BNU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF3-human ENCAB000ADZ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF747HGM, ENCFF750MIM, ENCFF849WYX 186852405 ENCODE Processing Pipeline 39cd008636af18efda8096bc4a757644 https://www.encodeproject.org/files/ENCFF301NGC/@@download/ENCFF301NGC.bigWig hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF159FEO bigWig fold change over control ENCSR000BNU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF3-human ENCAB000ADZ DNA see document see document False 2011-07-18 ENCODE 2 ENCFF750MIM, ENCFF849WYX 244716492 ENCODE Processing Pipeline 52d887d48d1e5dbb1a2be9b07b787100 https://www.encodeproject.org/files/ENCFF159FEO/@@download/ENCFF159FEO.bigWig hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF015HEH bed narrowPeak peaks ENCSR000BNU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF3-human ENCAB000ADZ DNA see document see document False 2011-07-18 ENCODE 1 ENCFF747HGM, ENCFF750MIM 4316404 ENCODE Processing Pipeline 8207f76f290825f56931668fde6dc792 https://www.encodeproject.org/files/ENCFF015HEH/@@download/ENCFF015HEH.bed.gz hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF475TQE bed narrowPeak optimal idr thresholded peaks ENCSR000BNU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF3-human ENCAB000ADZ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF001TDO, ENCFF015HEH, ENCFF146YXX, ENCFF251XOI 128953 ENCODE Processing Pipeline 146c148cf8221517c340d416403eefc1 https://www.encodeproject.org/files/ENCFF475TQE/@@download/ENCFF475TQE.bed.gz hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF979LFW bigWig signal p-value ENCSR000BNU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF3-human ENCAB000ADZ DNA see document see document False 2011-07-18 ENCODE 1 ENCFF747HGM, ENCFF750MIM 202223249 ENCODE Processing Pipeline 006798a2c2b780d7dd16c7c6708b246d https://www.encodeproject.org/files/ENCFF979LFW/@@download/ENCFF979LFW.bigWig hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF363CMR bigWig signal p-value ENCSR000BNU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF3-human ENCAB000ADZ DNA see document see document False 2011-07-18 ENCODE 2 ENCFF750MIM, ENCFF849WYX 215005974 ENCODE Processing Pipeline f2f8e15ec84d9b22386c05d67edc41da https://www.encodeproject.org/files/ENCFF363CMR/@@download/ENCFF363CMR.bigWig hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF384SYF bigBed narrowPeak conservative idr thresholded peaks ENCSR000BNU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF3-human ENCAB000ADZ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF355QAJ 47198 ENCODE Processing Pipeline e220bbf32d7a048f5c4a91847764cf51 https://www.encodeproject.org/files/ENCFF384SYF/@@download/ENCFF384SYF.bigBed hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF738BYI bigWig fold change over control ENCSR000BNU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF3-human ENCAB000ADZ DNA see document see document False 2011-07-18 ENCODE 1 ENCFF747HGM, ENCFF750MIM 316982094 ENCODE Processing Pipeline a7305aebf52b28c875ee20cf8c63c671 https://www.encodeproject.org/files/ENCFF738BYI/@@download/ENCFF738BYI.bigWig hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF813RAT bigWig fold change over control ENCSR000BNU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF3-human ENCAB000ADZ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF747HGM, ENCFF750MIM, ENCFF849WYX 496022079 ENCODE Processing Pipeline cf18d1d2dcecdb06ce477f07efe53ace https://www.encodeproject.org/files/ENCFF813RAT/@@download/ENCFF813RAT.bigWig hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF931LMI bigBed narrowPeak peaks ENCSR000BNU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF3-human ENCAB000ADZ DNA see document see document False 2011-07-18 ENCODE 1 ENCFF015HEH 10247016 ENCODE Processing Pipeline 40776a4d2570fe8b5e4cd7f9b626ab17 https://www.encodeproject.org/files/ENCFF931LMI/@@download/ENCFF931LMI.bigBed hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF777FYO bigBed narrowPeak peaks ENCSR000BNU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF3-human ENCAB000ADZ DNA see document see document False 2011-07-18 ENCODE 2 ENCFF146YXX 2050395 ENCODE Processing Pipeline a555f293c234bc755b85802eb798b311 https://www.encodeproject.org/files/ENCFF777FYO/@@download/ENCFF777FYO.bigBed hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF251XOI bed narrowPeak peaks ENCSR000BNU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF3-human ENCAB000ADZ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF747HGM, ENCFF750MIM, ENCFF849WYX 5158904 ENCODE Processing Pipeline a6af902871f1bad066237d162797d318 https://www.encodeproject.org/files/ENCFF251XOI/@@download/ENCFF251XOI.bed.gz hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF442BAV bigBed narrowPeak peaks ENCSR000BNU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF3-human ENCAB000ADZ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF251XOI 10794087 ENCODE Processing Pipeline 879cf95bb4ffcdf4041d733d79156242 https://www.encodeproject.org/files/ENCFF442BAV/@@download/ENCFF442BAV.bigBed hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF355QAJ bed narrowPeak conservative idr thresholded peaks ENCSR000BNU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF3-human ENCAB000ADZ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF001TDO, ENCFF015HEH, ENCFF146YXX, ENCFF251XOI 7620 ENCODE Processing Pipeline fcdee593f587490905a36eea5714b299 https://www.encodeproject.org/files/ENCFF355QAJ/@@download/ENCFF355QAJ.bed.gz hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF146YXX bed narrowPeak peaks ENCSR000BNU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF3-human ENCAB000ADZ DNA see document see document False 2011-07-18 ENCODE 2 ENCFF750MIM, ENCFF849WYX 937915 ENCODE Processing Pipeline 5a4600cdc6485de1e8feaea493b849e8 https://www.encodeproject.org/files/ENCFF146YXX/@@download/ENCFF146YXX.bed.gz hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF405NCV bigBed narrowPeak optimal idr thresholded peaks ENCSR000BNU ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF3-human ENCAB000ADZ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF475TQE 246868 ENCODE Processing Pipeline 91d2d8182a18ce488fb501bf4725d7dd https://www.encodeproject.org/files/ENCFF405NCV/@@download/ENCFF405NCV.bigBed hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF000ZAW bam alignments ENCSR000EGA ChIP-seq EFO:0002067 K562 cell line Homo sapiens TBL1XR1-human ENCAB000ALP DNA see document see document False 2012-05-14 ENCODE 1 1 555963223 Michael Snyder, Stanford 75ad6bcef1b63c05e936a0cd2c0d925d https://www.encodeproject.org/files/ENCFF000ZAW/@@download/ENCFF000ZAW.bam hg19 archived low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample, missing derived_from ENCFF000ZAX bigBed narrowPeak peaks ENCSR000EGA ChIP-seq EFO:0002067 K562 cell line Homo sapiens TBL1XR1-human ENCAB000ALP DNA see document see document False 2012-05-14 ENCODE ENCFF001VPA 1838155 Michael Snyder, Stanford 9b90a07b5e17fdb2da3848640c1f3dcb https://www.encodeproject.org/files/ENCFF000ZAX/@@download/ENCFF000ZAX.bigBed hg19 archived low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF000ZAY fastq reads ENCSR000EGA ChIP-seq EFO:0002067 K562 cell line Homo sapiens TBL1XR1-human ENCAB000ALP DNA see document see document False 2012-05-14 ENCODE 1 1 36 single-ended 1089528817 Michael Snyder, Stanford bd6158c2a6497f67731000c8624ef614 https://www.encodeproject.org/files/ENCFF000ZAY/@@download/ENCFF000ZAY.fastq.gz Illumina Genome Analyzer /files/ENCFF000YRB/ released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF000ZBA fastq reads ENCSR000EGA ChIP-seq EFO:0002067 K562 cell line Homo sapiens TBL1XR1-human ENCAB000ALP DNA see document see document False 2012-05-14 ENCODE 2 1 36 single-ended 984042749 Michael Snyder, Stanford 5df641f16848db69fe7b77fa5763498a https://www.encodeproject.org/files/ENCFF000ZBA/@@download/ENCFF000ZBA.fastq.gz Illumina Genome Analyzer /files/ENCFF000YRB/ released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF000ZBB bam alignments ENCSR000EGA ChIP-seq EFO:0002067 K562 cell line Homo sapiens TBL1XR1-human ENCAB000ALP DNA see document see document False 2012-05-14 ENCODE 2 1 497484529 Michael Snyder, Stanford 22051f374e26e5c359c0c9239b5c4044 https://www.encodeproject.org/files/ENCFF000ZBB/@@download/ENCFF000ZBB.bam hg19 archived low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample, missing derived_from ENCFF000ZBD bigWig signal ENCSR000EGA ChIP-seq EFO:0002067 K562 cell line Homo sapiens TBL1XR1-human ENCAB000ALP DNA see document see document False 2012-05-14 ENCODE 402772518 Michael Snyder, Stanford a07a4de374a051d69225cbc665355c3c https://www.encodeproject.org/files/ENCFF000ZBD/@@download/ENCFF000ZBD.bigWig hg19 archived low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample, missing derived_from ENCFF001VPA bed narrowPeak peaks ENCSR000EGA ChIP-seq EFO:0002067 K562 cell line Homo sapiens TBL1XR1-human ENCAB000ALP DNA see document see document False 2012-05-14 ENCODE 694993 Michael Snyder, Stanford 1a5b0eb668f8ebaa2382eefc709dc80f https://www.encodeproject.org/files/ENCFF001VPA/@@download/ENCFF001VPA.bed.gz hg19 archived low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample, missing derived_from ENCFF002CYI bed narrowPeak optimal idr thresholded peaks ENCSR000EGA ChIP-seq EFO:0002067 K562 cell line Homo sapiens TBL1XR1-human ENCAB000ALP DNA see document see document False 2012-05-14 ENCODE 132380 ENCODE Consortium Analysis Working Group 7179d23bbb19655b2530129332aab3e8 https://www.encodeproject.org/files/ENCFF002CYI/@@download/ENCFF002CYI.bed.gz hg19 archived low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample, missing derived_from ENCFF812RYR bigBed narrowPeak optimal idr thresholded peaks ENCSR000EGA ChIP-seq EFO:0002067 K562 cell line Homo sapiens TBL1XR1-human ENCAB000ALP DNA see document see document False 2012-05-14 ENCODE ENCFF002CYI 401366 ENCODE Consortium b6a010d1f914728343856e7d091ac23a https://www.encodeproject.org/files/ENCFF812RYR/@@download/ENCFF812RYR.bigBed hg19 archived low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF769NEJ bam unfiltered alignments ENCSR000EGA ChIP-seq EFO:0002067 K562 cell line Homo sapiens TBL1XR1-human ENCAB000ALP DNA see document see document False 2012-05-14 ENCODE 2 36 ENCFF000ZBA, ENCFF643CGH 1162269418 ENCODE Processing Pipeline a0981d41f1ba989b32f7205b4bb6d10b https://www.encodeproject.org/files/ENCFF769NEJ/@@download/ENCFF769NEJ.bam GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF964COC bam alignments ENCSR000EGA ChIP-seq EFO:0002067 K562 cell line Homo sapiens TBL1XR1-human ENCAB000ALP DNA see document see document False 2012-05-14 ENCODE 2 36 ENCFF000ZBA, ENCFF643CGH 777997097 ENCODE Processing Pipeline ade6e3186fd79d0f672ff140df956a95 https://www.encodeproject.org/files/ENCFF964COC/@@download/ENCFF964COC.bam GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF397AQJ bam unfiltered alignments ENCSR000EGA ChIP-seq EFO:0002067 K562 cell line Homo sapiens TBL1XR1-human ENCAB000ALP DNA see document see document False 2012-05-14 ENCODE 1 36 ENCFF000ZAY, ENCFF643CGH 1251616369 ENCODE Processing Pipeline 1e4c39bc752003a046be0ca3e39363cc https://www.encodeproject.org/files/ENCFF397AQJ/@@download/ENCFF397AQJ.bam GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF946HWT bam alignments ENCSR000EGA ChIP-seq EFO:0002067 K562 cell line Homo sapiens TBL1XR1-human ENCAB000ALP DNA see document see document False 2012-05-14 ENCODE 1 36 ENCFF000ZAY, ENCFF643CGH 853885397 ENCODE Processing Pipeline 34c60cf470f247bbe8c7fd659b7c2ae7 https://www.encodeproject.org/files/ENCFF946HWT/@@download/ENCFF946HWT.bam GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF853HTM bam unfiltered alignments ENCSR000EGA ChIP-seq EFO:0002067 K562 cell line Homo sapiens TBL1XR1-human ENCAB000ALP DNA see document see document False 2012-05-14 ENCODE 2 36 ENCFF000ZBA, ENCFF807MUK 1157067199 ENCODE Processing Pipeline 2d22d3f45917dfff4f3b12ba98cbdea9 https://www.encodeproject.org/files/ENCFF853HTM/@@download/ENCFF853HTM.bam hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF645ZSW bam alignments ENCSR000EGA ChIP-seq EFO:0002067 K562 cell line Homo sapiens TBL1XR1-human ENCAB000ALP DNA see document see document False 2012-05-14 ENCODE 2 36 ENCFF000ZBA, ENCFF807MUK 778551098 ENCODE Processing Pipeline fc305d51601094e0213617d79188ef4e https://www.encodeproject.org/files/ENCFF645ZSW/@@download/ENCFF645ZSW.bam hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF376MQL bam unfiltered alignments ENCSR000EGA ChIP-seq EFO:0002067 K562 cell line Homo sapiens TBL1XR1-human ENCAB000ALP DNA see document see document False 2012-05-14 ENCODE 1 36 ENCFF000ZAY, ENCFF807MUK 1244589344 ENCODE Processing Pipeline bca26856930b2e873460f04ccb38ac78 https://www.encodeproject.org/files/ENCFF376MQL/@@download/ENCFF376MQL.bam hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF676WXJ bam alignments ENCSR000EGA ChIP-seq EFO:0002067 K562 cell line Homo sapiens TBL1XR1-human ENCAB000ALP DNA see document see document False 2012-05-14 ENCODE 1 36 ENCFF000ZAY, ENCFF807MUK 854465237 ENCODE Processing Pipeline f23a65cfceac4edd1463d9a1427eb6ae https://www.encodeproject.org/files/ENCFF676WXJ/@@download/ENCFF676WXJ.bam hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF550AUT bigWig signal p-value ENCSR000EGA ChIP-seq EFO:0002067 K562 cell line Homo sapiens TBL1XR1-human ENCAB000ALP DNA see document see document False 2012-05-14 ENCODE 2 ENCFF645ZSW, ENCFF710NTS 455932885 ENCODE Processing Pipeline 3c9e1f9a1648489ce803fb45beb3d8d9 https://www.encodeproject.org/files/ENCFF550AUT/@@download/ENCFF550AUT.bigWig hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF046SKK bigBed narrowPeak peaks ENCSR000EGA ChIP-seq EFO:0002067 K562 cell line Homo sapiens TBL1XR1-human ENCAB000ALP DNA see document see document False 2012-05-14 ENCODE 1 ENCFF570BGF 13185308 ENCODE Processing Pipeline 8410d2041f064868bac3229b52ff0ac3 https://www.encodeproject.org/files/ENCFF046SKK/@@download/ENCFF046SKK.bigBed hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF570BGF bed narrowPeak peaks ENCSR000EGA ChIP-seq EFO:0002067 K562 cell line Homo sapiens TBL1XR1-human ENCAB000ALP DNA see document see document False 2012-05-14 ENCODE 1 ENCFF676WXJ, ENCFF710NTS 5126978 ENCODE Processing Pipeline 3dbc54e6e80b80390a000d4502766d78 https://www.encodeproject.org/files/ENCFF570BGF/@@download/ENCFF570BGF.bed.gz hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF041WFQ bigWig fold change over control ENCSR000EGA ChIP-seq EFO:0002067 K562 cell line Homo sapiens TBL1XR1-human ENCAB000ALP DNA see document see document False 2012-05-14 ENCODE 1 ENCFF676WXJ, ENCFF710NTS 432535639 ENCODE Processing Pipeline 9ef9fac66d5ddade481c8fd6b6d78e64 https://www.encodeproject.org/files/ENCFF041WFQ/@@download/ENCFF041WFQ.bigWig hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF350TPD bigWig fold change over control ENCSR000EGA ChIP-seq EFO:0002067 K562 cell line Homo sapiens TBL1XR1-human ENCAB000ALP DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF645ZSW, ENCFF676WXJ, ENCFF710NTS 687840686 ENCODE Processing Pipeline 4122ec2326267bb9f90f832bdf72160b https://www.encodeproject.org/files/ENCFF350TPD/@@download/ENCFF350TPD.bigWig hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF079WSL bigWig signal p-value ENCSR000EGA ChIP-seq EFO:0002067 K562 cell line Homo sapiens TBL1XR1-human ENCAB000ALP DNA see document see document False 2012-05-14 ENCODE 1 ENCFF676WXJ, ENCFF710NTS 474639922 ENCODE Processing Pipeline f9bfd26afd777b081bccd37a085557f7 https://www.encodeproject.org/files/ENCFF079WSL/@@download/ENCFF079WSL.bigWig hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF029WBH bed narrowPeak peaks ENCSR000EGA ChIP-seq EFO:0002067 K562 cell line Homo sapiens TBL1XR1-human ENCAB000ALP DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF645ZSW, ENCFF676WXJ, ENCFF710NTS 6005378 ENCODE Processing Pipeline fa7e9ed24a7267861d7c2a5a0676614c https://www.encodeproject.org/files/ENCFF029WBH/@@download/ENCFF029WBH.bed.gz hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF169QNX bigBed narrowPeak peaks ENCSR000EGA ChIP-seq EFO:0002067 K562 cell line Homo sapiens TBL1XR1-human ENCAB000ALP DNA see document see document False 2012-05-14 ENCODE 2 ENCFF148FBK 13014790 ENCODE Processing Pipeline d409a8b8e0686e316f1afd87c7d6e754 https://www.encodeproject.org/files/ENCFF169QNX/@@download/ENCFF169QNX.bigBed hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF531SEM bed narrowPeak conservative idr thresholded peaks ENCSR000EGA ChIP-seq EFO:0002067 K562 cell line Homo sapiens TBL1XR1-human ENCAB000ALP DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF001TDO, ENCFF029WBH, ENCFF148FBK, ENCFF570BGF 96529 ENCODE Processing Pipeline c9dd62cbe23924e6a27e0c5ec0ce92fe https://www.encodeproject.org/files/ENCFF531SEM/@@download/ENCFF531SEM.bed.gz hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF514QSC bigBed narrowPeak conservative idr thresholded peaks ENCSR000EGA ChIP-seq EFO:0002067 K562 cell line Homo sapiens TBL1XR1-human ENCAB000ALP DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF531SEM 224842 ENCODE Processing Pipeline c32cb0ed40777facc0b55cb4422b3f01 https://www.encodeproject.org/files/ENCFF514QSC/@@download/ENCFF514QSC.bigBed hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF048OBR bed narrowPeak optimal idr thresholded peaks ENCSR000EGA ChIP-seq EFO:0002067 K562 cell line Homo sapiens TBL1XR1-human ENCAB000ALP DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF001TDO, ENCFF029WBH, ENCFF148FBK, ENCFF570BGF 116170 ENCODE Processing Pipeline af849a8e32cce9ef81c5076327bc52fa https://www.encodeproject.org/files/ENCFF048OBR/@@download/ENCFF048OBR.bed.gz hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF779GLP bigBed narrowPeak optimal idr thresholded peaks ENCSR000EGA ChIP-seq EFO:0002067 K562 cell line Homo sapiens TBL1XR1-human ENCAB000ALP DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF048OBR 301609 ENCODE Processing Pipeline 21c081745133b1102f8a3003e0dd671a https://www.encodeproject.org/files/ENCFF779GLP/@@download/ENCFF779GLP.bigBed hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF912CSE bigWig signal p-value ENCSR000EGA ChIP-seq EFO:0002067 K562 cell line Homo sapiens TBL1XR1-human ENCAB000ALP DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF645ZSW, ENCFF676WXJ, ENCFF710NTS 559384070 ENCODE Processing Pipeline c81a21d14ef754259ecf3c8fccbc98ab https://www.encodeproject.org/files/ENCFF912CSE/@@download/ENCFF912CSE.bigWig hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF148FBK bed narrowPeak peaks ENCSR000EGA ChIP-seq EFO:0002067 K562 cell line Homo sapiens TBL1XR1-human ENCAB000ALP DNA see document see document False 2012-05-14 ENCODE 2 ENCFF645ZSW, ENCFF710NTS 5143978 ENCODE Processing Pipeline dcb2ca543a2f81c300abae00838438a4 https://www.encodeproject.org/files/ENCFF148FBK/@@download/ENCFF148FBK.bed.gz hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF399ZJA bigWig fold change over control ENCSR000EGA ChIP-seq EFO:0002067 K562 cell line Homo sapiens TBL1XR1-human ENCAB000ALP DNA see document see document False 2012-05-14 ENCODE 2 ENCFF645ZSW, ENCFF710NTS 378055832 ENCODE Processing Pipeline 977cb32d65fef3ae2ecaf5418b11a070 https://www.encodeproject.org/files/ENCFF399ZJA/@@download/ENCFF399ZJA.bigWig hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF167OYF bigBed narrowPeak peaks ENCSR000EGA ChIP-seq EFO:0002067 K562 cell line Homo sapiens TBL1XR1-human ENCAB000ALP DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF029WBH 13279194 ENCODE Processing Pipeline 183b740c3ad8b7dd8d057288301c22ca https://www.encodeproject.org/files/ENCFF167OYF/@@download/ENCFF167OYF.bigBed hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF002KZG bigWig signal p-value ENCSR000EGA ChIP-seq EFO:0002067 K562 cell line Homo sapiens TBL1XR1-human ENCAB000ALP DNA see document see document False 2012-05-14 ENCODE 1 ENCFF023NGN, ENCFF946HWT 559204205 ENCODE Processing Pipeline 972d93ea80661bec656b95c99f6b6340 https://www.encodeproject.org/files/ENCFF002KZG/@@download/ENCFF002KZG.bigWig GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF055TLK bigWig signal p-value ENCSR000EGA ChIP-seq EFO:0002067 K562 cell line Homo sapiens TBL1XR1-human ENCAB000ALP DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF023NGN, ENCFF946HWT, ENCFF964COC 559070496 ENCODE Processing Pipeline 952a68fa7716aaf615753144b98d107f https://www.encodeproject.org/files/ENCFF055TLK/@@download/ENCFF055TLK.bigWig GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF946NVU bigWig signal p-value ENCSR000EGA ChIP-seq EFO:0002067 K562 cell line Homo sapiens TBL1XR1-human ENCAB000ALP DNA see document see document False 2012-05-14 ENCODE 2 ENCFF023NGN, ENCFF964COC 462245841 ENCODE Processing Pipeline c00bca4609248f2c03bef16ef8efdf13 https://www.encodeproject.org/files/ENCFF946NVU/@@download/ENCFF946NVU.bigWig GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF137HJL bigWig fold change over control ENCSR000EGA ChIP-seq EFO:0002067 K562 cell line Homo sapiens TBL1XR1-human ENCAB000ALP DNA see document see document False 2012-05-14 ENCODE 1 ENCFF023NGN, ENCFF946HWT 430629835 ENCODE Processing Pipeline 1d9afd606ad11412a2fddb94c4f27c4c https://www.encodeproject.org/files/ENCFF137HJL/@@download/ENCFF137HJL.bigWig GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF211ZZS bigWig fold change over control ENCSR000EGA ChIP-seq EFO:0002067 K562 cell line Homo sapiens TBL1XR1-human ENCAB000ALP DNA see document see document False 2012-05-14 ENCODE 2 ENCFF023NGN, ENCFF964COC 373664997 ENCODE Processing Pipeline 1ffbdb7a8fc7d6c532f14ce6a91f8c64 https://www.encodeproject.org/files/ENCFF211ZZS/@@download/ENCFF211ZZS.bigWig GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF012SWD bigWig fold change over control ENCSR000EGA ChIP-seq EFO:0002067 K562 cell line Homo sapiens TBL1XR1-human ENCAB000ALP DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF023NGN, ENCFF946HWT, ENCFF964COC 689147637 ENCODE Processing Pipeline c6c5190dc1dcb5a45971f9d52b497ff3 https://www.encodeproject.org/files/ENCFF012SWD/@@download/ENCFF012SWD.bigWig GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF172HUV bed narrowPeak peaks ENCSR000EGA ChIP-seq EFO:0002067 K562 cell line Homo sapiens TBL1XR1-human ENCAB000ALP DNA see document see document False 2012-05-14 ENCODE 1 ENCFF023NGN, ENCFF946HWT 5048555 ENCODE Processing Pipeline d49981a8c968db9c6e0d3563222b6d9e https://www.encodeproject.org/files/ENCFF172HUV/@@download/ENCFF172HUV.bed.gz GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF140JVE bed narrowPeak peaks ENCSR000EGA ChIP-seq EFO:0002067 K562 cell line Homo sapiens TBL1XR1-human ENCAB000ALP DNA see document see document False 2012-05-14 ENCODE 2 ENCFF023NGN, ENCFF964COC 5129323 ENCODE Processing Pipeline 8f93783c28ddb7eb66e80634938eaa23 https://www.encodeproject.org/files/ENCFF140JVE/@@download/ENCFF140JVE.bed.gz GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF708TPP bed narrowPeak peaks ENCSR000EGA ChIP-seq EFO:0002067 K562 cell line Homo sapiens TBL1XR1-human ENCAB000ALP DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF023NGN, ENCFF946HWT, ENCFF964COC 5989284 ENCODE Processing Pipeline 05dcf53e8581f96009b9c03d9ce1c5aa https://www.encodeproject.org/files/ENCFF708TPP/@@download/ENCFF708TPP.bed.gz GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF389JGN bigBed narrowPeak peaks ENCSR000EGA ChIP-seq EFO:0002067 K562 cell line Homo sapiens TBL1XR1-human ENCAB000ALP DNA see document see document False 2012-05-14 ENCODE 1 ENCFF172HUV 11016284 ENCODE Processing Pipeline 91a78699c10613a46c8ef841560fa0f0 https://www.encodeproject.org/files/ENCFF389JGN/@@download/ENCFF389JGN.bigBed GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF828HPR bigBed narrowPeak peaks ENCSR000EGA ChIP-seq EFO:0002067 K562 cell line Homo sapiens TBL1XR1-human ENCAB000ALP DNA see document see document False 2012-05-14 ENCODE 2 ENCFF140JVE 13008929 ENCODE Processing Pipeline e83af621f7d1e232e8b5f4d80cd9f63d https://www.encodeproject.org/files/ENCFF828HPR/@@download/ENCFF828HPR.bigBed GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF168HNG bigBed narrowPeak peaks ENCSR000EGA ChIP-seq EFO:0002067 K562 cell line Homo sapiens TBL1XR1-human ENCAB000ALP DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF708TPP 13284232 ENCODE Processing Pipeline 167cb5a37f0f4225e0db7411c4e7e74e https://www.encodeproject.org/files/ENCFF168HNG/@@download/ENCFF168HNG.bigBed GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF939RXT bigBed narrowPeak conservative idr thresholded peaks ENCSR000EGA ChIP-seq EFO:0002067 K562 cell line Homo sapiens TBL1XR1-human ENCAB000ALP DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF117UOA 229737 ENCODE Processing Pipeline 25f897ae35d630ddc54c435763daa43b https://www.encodeproject.org/files/ENCFF939RXT/@@download/ENCFF939RXT.bigBed GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF117UOA bed narrowPeak conservative idr thresholded peaks ENCSR000EGA ChIP-seq EFO:0002067 K562 cell line Homo sapiens TBL1XR1-human ENCAB000ALP DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF140JVE, ENCFF172HUV, ENCFF419RSJ, ENCFF708TPP 98813 ENCODE Processing Pipeline e6913cd83fb6875729a355488118b229 https://www.encodeproject.org/files/ENCFF117UOA/@@download/ENCFF117UOA.bed.gz GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF239WFN bed narrowPeak optimal idr thresholded peaks ENCSR000EGA ChIP-seq EFO:0002067 K562 cell line Homo sapiens TBL1XR1-human ENCAB000ALP DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF140JVE, ENCFF172HUV, ENCFF419RSJ, ENCFF708TPP 117271 ENCODE Processing Pipeline 0bb3f6845b1bbca94e1dfd27a3c65a75 https://www.encodeproject.org/files/ENCFF239WFN/@@download/ENCFF239WFN.bed.gz GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF851XFB bigBed narrowPeak optimal idr thresholded peaks ENCSR000EGA ChIP-seq EFO:0002067 K562 cell line Homo sapiens TBL1XR1-human ENCAB000ALP DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF239WFN 257779 ENCODE Processing Pipeline 5a0226e6c999bef2f38efcf7dbb346f1 https://www.encodeproject.org/files/ENCFF851XFB/@@download/ENCFF851XFB.bigBed GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF398DGY bam unfiltered alignments ENCSR920ASP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZFX-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 50 ENCFF215QBP, ENCFF807MUK 1077376643 ENCODE Processing Pipeline ee13406c5ce9b544f80f07bd0338061b https://www.encodeproject.org/files/ENCFF398DGY/@@download/ENCFF398DGY.bam hg19 released missing genetic modification characterization, low read depth ENCFF714TQJ bam unfiltered alignments ENCSR920ASP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZFX-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 50 ENCFF426DFS, ENCFF807MUK 1039915912 ENCODE Processing Pipeline addafaca92d0e727d3f38ec4ee5b37d0 https://www.encodeproject.org/files/ENCFF714TQJ/@@download/ENCFF714TQJ.bam hg19 released missing genetic modification characterization, low read depth ENCFF426DFS fastq reads ENCSR920ASP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZFX-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 1 50 single-ended 956201588 Kevin White, UChicago c6a9e3a4951d3c24a8ed393b30fe17f8 SRA:SRR6213986 https://www.encodeproject.org/files/ENCFF426DFS/@@download/ENCFF426DFS.fastq.gz Illumina HiSeq 2000 /files/ENCFF044EPS/ released missing genetic modification characterization, low read depth ENCFF215QBP fastq reads ENCSR920ASP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZFX-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 1 50 single-ended 1000451826 Kevin White, UChicago be8698180095a77f5d64937813609ce3 SRA:SRR6213985 https://www.encodeproject.org/files/ENCFF215QBP/@@download/ENCFF215QBP.fastq.gz Illumina HiSeq 2000 /files/ENCFF044EPS/ released missing genetic modification characterization, low read depth ENCFF500GNW bam alignments ENCSR920ASP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZFX-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 50 ENCFF426DFS, ENCFF807MUK 811862923 ENCODE Processing Pipeline 751976903f70f3ec33e30d1314028bc4 https://www.encodeproject.org/files/ENCFF500GNW/@@download/ENCFF500GNW.bam hg19 released missing genetic modification characterization, low read depth ENCFF804GZU bam alignments ENCSR920ASP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZFX-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 50 ENCFF215QBP, ENCFF807MUK 841766508 ENCODE Processing Pipeline c8b0e5f0b3de657348a08c08a5bcf35a https://www.encodeproject.org/files/ENCFF804GZU/@@download/ENCFF804GZU.bam hg19 released missing genetic modification characterization, low read depth ENCFF917MWY bigWig fold change over control ENCSR920ASP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZFX-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF053ULL, ENCFF804GZU 474991837 ENCODE Processing Pipeline 1e22cc40726eb963fa76dbf79d180272 https://www.encodeproject.org/files/ENCFF917MWY/@@download/ENCFF917MWY.bigWig hg19 released missing genetic modification characterization, low read depth ENCFF487JYD bed narrowPeak peaks ENCSR920ASP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZFX-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF053ULL, ENCFF804GZU 6198220 ENCODE Processing Pipeline 149c202090cd8c1452ad189901f54d15 https://www.encodeproject.org/files/ENCFF487JYD/@@download/ENCFF487JYD.bed.gz hg19 released missing genetic modification characterization, low read depth ENCFF583QEJ bigWig signal p-value ENCSR920ASP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZFX-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF053ULL, ENCFF804GZU 552528857 ENCODE Processing Pipeline fb3d44d4728a1bf8f0a74bfa7c705646 https://www.encodeproject.org/files/ENCFF583QEJ/@@download/ENCFF583QEJ.bigWig hg19 released missing genetic modification characterization, low read depth ENCFF002QEB bigWig signal p-value ENCSR920ASP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZFX-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF053ULL, ENCFF500GNW, ENCFF804GZU 692921792 ENCODE Processing Pipeline 570a011c0ac7c7011f17cf6f2aca0e70 https://www.encodeproject.org/files/ENCFF002QEB/@@download/ENCFF002QEB.bigWig hg19 released missing genetic modification characterization, low read depth ENCFF423GZH bed narrowPeak peaks ENCSR920ASP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZFX-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF053ULL, ENCFF500GNW 6055436 ENCODE Processing Pipeline 6b81da2f832fd3de56ca5db061472997 https://www.encodeproject.org/files/ENCFF423GZH/@@download/ENCFF423GZH.bed.gz hg19 released missing genetic modification characterization, low read depth ENCFF823IBN bigBed narrowPeak peaks ENCSR920ASP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZFX-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF423GZH 13102410 ENCODE Processing Pipeline 80bbbd0a42f7ffb48563094e6ce72c13 https://www.encodeproject.org/files/ENCFF823IBN/@@download/ENCFF823IBN.bigBed hg19 released missing genetic modification characterization, low read depth ENCFF104RJR bigBed narrowPeak peaks ENCSR920ASP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZFX-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF590NAP 13167345 ENCODE Processing Pipeline eaf33e2aacacac41d0f563de14f04110 https://www.encodeproject.org/files/ENCFF104RJR/@@download/ENCFF104RJR.bigBed hg19 released missing genetic modification characterization, low read depth ENCFF117IQQ bigWig signal p-value ENCSR920ASP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZFX-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF053ULL, ENCFF500GNW 514803191 ENCODE Processing Pipeline bd7f025a433de976cb79e6b1d2b18572 https://www.encodeproject.org/files/ENCFF117IQQ/@@download/ENCFF117IQQ.bigWig hg19 released missing genetic modification characterization, low read depth ENCFF236GVP bigWig fold change over control ENCSR920ASP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZFX-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF053ULL, ENCFF500GNW 458132775 ENCODE Processing Pipeline 40265e02cc1877fe29832e02231d2905 https://www.encodeproject.org/files/ENCFF236GVP/@@download/ENCFF236GVP.bigWig hg19 released missing genetic modification characterization, low read depth ENCFF962YAA bigWig fold change over control ENCSR920ASP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZFX-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF053ULL, ENCFF500GNW, ENCFF804GZU 731194457 ENCODE Processing Pipeline adee7e7c59d45ba22e1a4fffcc6ccce4 https://www.encodeproject.org/files/ENCFF962YAA/@@download/ENCFF962YAA.bigWig hg19 released missing genetic modification characterization, low read depth ENCFF590NAP bed narrowPeak peaks ENCSR920ASP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZFX-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF053ULL, ENCFF500GNW, ENCFF804GZU 6747513 ENCODE Processing Pipeline 5f5dfbcf75ed5937e8532fe3b8b44953 https://www.encodeproject.org/files/ENCFF590NAP/@@download/ENCFF590NAP.bed.gz hg19 released missing genetic modification characterization, low read depth ENCFF127JDK bigBed narrowPeak peaks ENCSR920ASP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZFX-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF487JYD 13097092 ENCODE Processing Pipeline 26795abae8a1e1bde04d6c44dfe56413 https://www.encodeproject.org/files/ENCFF127JDK/@@download/ENCFF127JDK.bigBed hg19 released missing genetic modification characterization, low read depth ENCFF338NPG bam unfiltered alignments ENCSR920ASP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZFX-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 50 ENCFF426DFS, ENCFF643CGH 1044721119 ENCODE Processing Pipeline d267b3c8188abd313d4e0d22f988989e https://www.encodeproject.org/files/ENCFF338NPG/@@download/ENCFF338NPG.bam GRCh38 released missing genetic modification characterization, low read depth ENCFF172GCN bam unfiltered alignments ENCSR920ASP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZFX-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 50 ENCFF215QBP, ENCFF643CGH 1082045820 ENCODE Processing Pipeline 6910c4bca8ffe77387ee7b52f2ef8041 https://www.encodeproject.org/files/ENCFF172GCN/@@download/ENCFF172GCN.bam GRCh38 released missing genetic modification characterization, low read depth ENCFF680KUB bam alignments ENCSR920ASP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZFX-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 50 ENCFF215QBP, ENCFF643CGH 841330804 ENCODE Processing Pipeline e274afe97bacb1f00d005d4247697cb0 https://www.encodeproject.org/files/ENCFF680KUB/@@download/ENCFF680KUB.bam GRCh38 released missing genetic modification characterization, low read depth ENCFF757TIT bam alignments ENCSR920ASP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZFX-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 50 ENCFF426DFS, ENCFF643CGH 811445298 ENCODE Processing Pipeline c6d9725640693da9c93fdcc0c18ac1a0 https://www.encodeproject.org/files/ENCFF757TIT/@@download/ENCFF757TIT.bam GRCh38 released missing genetic modification characterization, low read depth ENCFF214SAR bigWig signal p-value ENCSR920ASP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZFX-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF756KAA, ENCFF757TIT 590849558 ENCODE Processing Pipeline 70dd8e762c307fba73aea5d1e327a428 https://www.encodeproject.org/files/ENCFF214SAR/@@download/ENCFF214SAR.bigWig GRCh38 released missing genetic modification characterization, low read depth ENCFF313LSS bigWig signal p-value ENCSR920ASP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZFX-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF680KUB, ENCFF756KAA 461995395 ENCODE Processing Pipeline 2fde67a49ce1968f98fc8489378c2f89 https://www.encodeproject.org/files/ENCFF313LSS/@@download/ENCFF313LSS.bigWig GRCh38 released missing genetic modification characterization, low read depth ENCFF727NQN bigWig signal p-value ENCSR920ASP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZFX-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF680KUB, ENCFF756KAA, ENCFF757TIT 686665841 ENCODE Processing Pipeline 5590536cffdc51006d77d59b9bc3390d https://www.encodeproject.org/files/ENCFF727NQN/@@download/ENCFF727NQN.bigWig GRCh38 released missing genetic modification characterization, low read depth ENCFF479LED bigWig fold change over control ENCSR920ASP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZFX-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF680KUB, ENCFF756KAA 476092158 ENCODE Processing Pipeline 96e4ad24517c042a8861da651566f007 https://www.encodeproject.org/files/ENCFF479LED/@@download/ENCFF479LED.bigWig GRCh38 released missing genetic modification characterization, low read depth ENCFF904NRE bigWig fold change over control ENCSR920ASP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZFX-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF756KAA, ENCFF757TIT 461307671 ENCODE Processing Pipeline 1591ae61695e490b8d429a5b8d94aafb https://www.encodeproject.org/files/ENCFF904NRE/@@download/ENCFF904NRE.bigWig GRCh38 released missing genetic modification characterization, low read depth ENCFF201REJ bigWig fold change over control ENCSR920ASP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZFX-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF680KUB, ENCFF756KAA, ENCFF757TIT 737447969 ENCODE Processing Pipeline 680b9fe45e2f028dff3e1c411c5aaa39 https://www.encodeproject.org/files/ENCFF201REJ/@@download/ENCFF201REJ.bigWig GRCh38 released missing genetic modification characterization, low read depth ENCFF867DSB bed narrowPeak peaks ENCSR920ASP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZFX-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF680KUB, ENCFF756KAA, ENCFF757TIT 6565491 ENCODE Processing Pipeline e6bbcd9c0153dcdd1046f08a4f1d64bd https://www.encodeproject.org/files/ENCFF867DSB/@@download/ENCFF867DSB.bed.gz GRCh38 released missing genetic modification characterization, low read depth ENCFF022NSD bed narrowPeak peaks ENCSR920ASP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZFX-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF756KAA, ENCFF757TIT 5860452 ENCODE Processing Pipeline f1164658831219149c3f9f05cd436562 https://www.encodeproject.org/files/ENCFF022NSD/@@download/ENCFF022NSD.bed.gz GRCh38 released missing genetic modification characterization, low read depth ENCFF799ZUU bigBed narrowPeak peaks ENCSR920ASP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZFX-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF022NSD 13076980 ENCODE Processing Pipeline 4e79abfb16b7366940bd9b322eb3b8d4 https://www.encodeproject.org/files/ENCFF799ZUU/@@download/ENCFF799ZUU.bigBed GRCh38 released missing genetic modification characterization, low read depth ENCFF901HEW bigBed narrowPeak peaks ENCSR920ASP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZFX-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF867DSB 13167224 ENCODE Processing Pipeline a0cf19071b543058ebc579d9be6c49db https://www.encodeproject.org/files/ENCFF901HEW/@@download/ENCFF901HEW.bigBed GRCh38 released missing genetic modification characterization, low read depth ENCFF907LHK bigBed narrowPeak peaks ENCSR920ASP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZFX-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF593LGK 13039502 ENCODE Processing Pipeline 3cb03a5e01b8caa4fb41364bb12321a0 https://www.encodeproject.org/files/ENCFF907LHK/@@download/ENCFF907LHK.bigBed GRCh38 released missing genetic modification characterization, low read depth ENCFF572OWY bed narrowPeak optimal idr thresholded peaks ENCSR920ASP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZFX-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF022NSD, ENCFF419RSJ, ENCFF593LGK, ENCFF867DSB 473778 ENCODE Processing Pipeline 80a1eb3e913e8186076f68b3dc53905b https://www.encodeproject.org/files/ENCFF572OWY/@@download/ENCFF572OWY.bed.gz GRCh38 released missing genetic modification characterization, low read depth ENCFF340KMA bigBed narrowPeak optimal idr thresholded peaks ENCSR920ASP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZFX-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF572OWY 1093024 ENCODE Processing Pipeline 091ba0ce5fd2b94eef532c92ced12ee2 https://www.encodeproject.org/files/ENCFF340KMA/@@download/ENCFF340KMA.bigBed GRCh38 released missing genetic modification characterization, low read depth ENCFF593LGK bed narrowPeak peaks ENCSR920ASP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZFX-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF680KUB, ENCFF756KAA 5945742 ENCODE Processing Pipeline 555b9912348b75042f6fc92936e5f796 https://www.encodeproject.org/files/ENCFF593LGK/@@download/ENCFF593LGK.bed.gz GRCh38 released missing genetic modification characterization, low read depth ENCFF709IUJ bed narrowPeak conservative idr thresholded peaks ENCSR920ASP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZFX-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF022NSD, ENCFF419RSJ, ENCFF593LGK, ENCFF867DSB 470038 ENCODE Processing Pipeline 5dcd831928ffef01b05fbd2b54e2d844 https://www.encodeproject.org/files/ENCFF709IUJ/@@download/ENCFF709IUJ.bed.gz GRCh38 released missing genetic modification characterization, low read depth ENCFF782LGJ bigBed narrowPeak conservative idr thresholded peaks ENCSR920ASP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZFX-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF709IUJ 1086084 ENCODE Processing Pipeline 1bac79ec90b7dc550ed084f97fbcce08 https://www.encodeproject.org/files/ENCFF782LGJ/@@download/ENCFF782LGJ.bigBed GRCh38 released missing genetic modification characterization, low read depth ENCFF244YEY bigBed narrowPeak conservative idr thresholded peaks ENCSR920ASP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZFX-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF575JXW 808223 ENCODE Processing Pipeline 9d9e2d7d929d82788bfda3d2ea3e7fcf https://www.encodeproject.org/files/ENCFF244YEY/@@download/ENCFF244YEY.bigBed hg19 released missing genetic modification characterization, low read depth ENCFF575JXW bed narrowPeak conservative idr thresholded peaks ENCSR920ASP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZFX-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF001TDO, ENCFF423GZH, ENCFF487JYD, ENCFF590NAP 414991 ENCODE Processing Pipeline 2e9780b666c281818fe50560613fe84b https://www.encodeproject.org/files/ENCFF575JXW/@@download/ENCFF575JXW.bed.gz hg19 released missing genetic modification characterization, low read depth ENCFF433RKB bed narrowPeak optimal idr thresholded peaks ENCSR920ASP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZFX-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF001TDO, ENCFF423GZH, ENCFF487JYD, ENCFF590NAP 422337 ENCODE Processing Pipeline f5ce515799a684a69f3d908d6f5358e2 https://www.encodeproject.org/files/ENCFF433RKB/@@download/ENCFF433RKB.bed.gz hg19 released missing genetic modification characterization, low read depth ENCFF926KSY bigBed narrowPeak optimal idr thresholded peaks ENCSR920ASP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZFX-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF433RKB 817532 ENCODE Processing Pipeline fe197c0204c00e99f7da9fd48af57c0c https://www.encodeproject.org/files/ENCFF926KSY/@@download/ENCFF926KSY.bigBed hg19 released missing genetic modification characterization, low read depth ENCFF466MIW fastq reads ENCSR754ZHU ChIP-seq EFO:0002067 K562 cell line Homo sapiens SNRNP70-human ENCAB649NDD DNA SDS formaldehyde False 2017-02-27 ENCODE 2 1 40 single-ended 715090523 Xiang-Dong Fu, UCSD e690c01118415d31992676d81392510d SRA:SRR6214189 https://www.encodeproject.org/files/ENCFF466MIW/@@download/ENCFF466MIW.fastq.gz Illumina HiSeq 2500 /files/ENCFF201ZVH/ released low read depth, low read length ENCFF110EDY fastq reads ENCSR754ZHU ChIP-seq EFO:0002067 K562 cell line Homo sapiens SNRNP70-human ENCAB649NDD DNA SDS formaldehyde False 2017-02-27 ENCODE 1 1 40 single-ended 675813758 Xiang-Dong Fu, UCSD 4fd64619a3524df0116d4c0f566a309a SRA:SRR6214190 https://www.encodeproject.org/files/ENCFF110EDY/@@download/ENCFF110EDY.fastq.gz Illumina HiSeq 2500 /files/ENCFF025UQF/ released low read depth, low read length ENCFF403WEJ bam unfiltered alignments ENCSR754ZHU ChIP-seq EFO:0002067 K562 cell line Homo sapiens SNRNP70-human ENCAB649NDD DNA SDS formaldehyde False 2017-02-27 ENCODE 1 40 ENCFF110EDY, ENCFF807MUK 940541325 ENCODE Processing Pipeline 7440a07d10286d29e2ced77a8ce034ec https://www.encodeproject.org/files/ENCFF403WEJ/@@download/ENCFF403WEJ.bam hg19 released low read depth, low read length ENCFF551QCK bam alignments ENCSR754ZHU ChIP-seq EFO:0002067 K562 cell line Homo sapiens SNRNP70-human ENCAB649NDD DNA SDS formaldehyde False 2017-02-27 ENCODE 1 40 ENCFF110EDY, ENCFF807MUK 594643035 ENCODE Processing Pipeline 035431d6db3a4437276f3d8a4adfea10 https://www.encodeproject.org/files/ENCFF551QCK/@@download/ENCFF551QCK.bam hg19 released low read depth, low read length ENCFF917XAY bam unfiltered alignments ENCSR754ZHU ChIP-seq EFO:0002067 K562 cell line Homo sapiens SNRNP70-human ENCAB649NDD DNA SDS formaldehyde False 2017-02-27 ENCODE 1 40 ENCFF110EDY, ENCFF643CGH 943098778 ENCODE Processing Pipeline 8615c37e1304ef11834a69cd50223b4b https://www.encodeproject.org/files/ENCFF917XAY/@@download/ENCFF917XAY.bam GRCh38 released low read depth, low read length ENCFF157WFG bam alignments ENCSR754ZHU ChIP-seq EFO:0002067 K562 cell line Homo sapiens SNRNP70-human ENCAB649NDD DNA SDS formaldehyde False 2017-02-27 ENCODE 1 40 ENCFF110EDY, ENCFF643CGH 593942400 ENCODE Processing Pipeline f051bf36dcc70c92832d5614f55ae7d8 https://www.encodeproject.org/files/ENCFF157WFG/@@download/ENCFF157WFG.bam GRCh38 released low read depth, low read length ENCFF546AFS bam alignments ENCSR754ZHU ChIP-seq EFO:0002067 K562 cell line Homo sapiens SNRNP70-human ENCAB649NDD DNA SDS formaldehyde False 2017-02-27 ENCODE 2 40 ENCFF466MIW, ENCFF807MUK 634629540 ENCODE Processing Pipeline 6b5bf2a1dfa3db24e5b9c5a89b0f353a https://www.encodeproject.org/files/ENCFF546AFS/@@download/ENCFF546AFS.bam hg19 released low read depth, low read length ENCFF317XGT bam unfiltered alignments ENCSR754ZHU ChIP-seq EFO:0002067 K562 cell line Homo sapiens SNRNP70-human ENCAB649NDD DNA SDS formaldehyde False 2017-02-27 ENCODE 2 40 ENCFF466MIW, ENCFF807MUK 996087134 ENCODE Processing Pipeline 46c50ba732dc96caac65e0e7cb29abd3 https://www.encodeproject.org/files/ENCFF317XGT/@@download/ENCFF317XGT.bam hg19 released low read depth, low read length ENCFF438HVZ bam unfiltered alignments ENCSR754ZHU ChIP-seq EFO:0002067 K562 cell line Homo sapiens SNRNP70-human ENCAB649NDD DNA SDS formaldehyde False 2017-02-27 ENCODE 2 40 ENCFF466MIW, ENCFF643CGH 998969154 ENCODE Processing Pipeline d8331d50df4a297bac4480f9494af6f5 https://www.encodeproject.org/files/ENCFF438HVZ/@@download/ENCFF438HVZ.bam GRCh38 released low read depth, low read length ENCFF372NDR bam alignments ENCSR754ZHU ChIP-seq EFO:0002067 K562 cell line Homo sapiens SNRNP70-human ENCAB649NDD DNA SDS formaldehyde False 2017-02-27 ENCODE 2 40 ENCFF466MIW, ENCFF643CGH 633932582 ENCODE Processing Pipeline 666656120a552574dacdea095fe265cd https://www.encodeproject.org/files/ENCFF372NDR/@@download/ENCFF372NDR.bam GRCh38 released low read depth, low read length ENCFF044JID bigWig fold change over control ENCSR754ZHU ChIP-seq EFO:0002067 K562 cell line Homo sapiens SNRNP70-human ENCAB649NDD DNA SDS formaldehyde False 2017-02-27 ENCODE 1 ENCFF477SGV, ENCFF551QCK 348227944 ENCODE Processing Pipeline a53797adb7ec458bcc83990311d0803d https://www.encodeproject.org/files/ENCFF044JID/@@download/ENCFF044JID.bigWig hg19 released low read depth, low read length ENCFF769MWV bed narrowPeak peaks ENCSR754ZHU ChIP-seq EFO:0002067 K562 cell line Homo sapiens SNRNP70-human ENCAB649NDD DNA SDS formaldehyde False 2017-02-27 ENCODE 1 ENCFF477SGV, ENCFF551QCK 4718222 ENCODE Processing Pipeline 19256ba74f45415382b6ea8f51a7244a https://www.encodeproject.org/files/ENCFF769MWV/@@download/ENCFF769MWV.bed.gz hg19 released low read depth, low read length ENCFF833FDT bigWig signal p-value ENCSR754ZHU ChIP-seq EFO:0002067 K562 cell line Homo sapiens SNRNP70-human ENCAB649NDD DNA SDS formaldehyde False 2017-02-27 ENCODE 2 ENCFF546AFS, ENCFF705ZEH 514189913 ENCODE Processing Pipeline 55205cf822dd8231b8aa5b5d7ad997bb https://www.encodeproject.org/files/ENCFF833FDT/@@download/ENCFF833FDT.bigWig hg19 released low read depth, low read length ENCFF622THV bed narrowPeak peaks ENCSR754ZHU ChIP-seq EFO:0002067 K562 cell line Homo sapiens SNRNP70-human ENCAB649NDD DNA SDS formaldehyde False 2017-02-27 ENCODE 2 ENCFF546AFS, ENCFF705ZEH 4834476 ENCODE Processing Pipeline a78791463de6509ad4f36b0cacb53445 https://www.encodeproject.org/files/ENCFF622THV/@@download/ENCFF622THV.bed.gz hg19 released low read depth, low read length ENCFF647LCC bigWig signal p-value ENCSR754ZHU ChIP-seq EFO:0002067 K562 cell line Homo sapiens SNRNP70-human ENCAB649NDD DNA SDS formaldehyde False 2017-02-27 ENCODE 1 ENCFF477SGV, ENCFF551QCK 416480113 ENCODE Processing Pipeline a67284f2fbd9cee5977fdf2bae84c449 https://www.encodeproject.org/files/ENCFF647LCC/@@download/ENCFF647LCC.bigWig hg19 released low read depth, low read length ENCFF989OXX bigWig fold change over control ENCSR754ZHU ChIP-seq EFO:0002067 K562 cell line Homo sapiens SNRNP70-human ENCAB649NDD DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF477SGV, ENCFF546AFS, ENCFF551QCK, ENCFF705ZEH 798403378 ENCODE Processing Pipeline 9cd80ad41dc52f964b09d3bf427d0631 https://www.encodeproject.org/files/ENCFF989OXX/@@download/ENCFF989OXX.bigWig hg19 released low read depth, low read length ENCFF704ZRB bigBed narrowPeak peaks ENCSR754ZHU ChIP-seq EFO:0002067 K562 cell line Homo sapiens SNRNP70-human ENCAB649NDD DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF626AAZ 13291997 ENCODE Processing Pipeline 0a2979cb440d9d3930dabc81bbd67e7b https://www.encodeproject.org/files/ENCFF704ZRB/@@download/ENCFF704ZRB.bigBed hg19 released low read depth, low read length ENCFF190QFS bigBed narrowPeak conservative idr thresholded peaks ENCSR754ZHU ChIP-seq EFO:0002067 K562 cell line Homo sapiens SNRNP70-human ENCAB649NDD DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF260IOV 106151 ENCODE Processing Pipeline c9a8b9f4962bd71f365da5cd63dd70f6 https://www.encodeproject.org/files/ENCFF190QFS/@@download/ENCFF190QFS.bigBed hg19 released low read depth, low read length ENCFF774YIJ bigWig signal p-value ENCSR754ZHU ChIP-seq EFO:0002067 K562 cell line Homo sapiens SNRNP70-human ENCAB649NDD DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF477SGV, ENCFF546AFS, ENCFF551QCK, ENCFF705ZEH 861252699 ENCODE Processing Pipeline aabdf352eaa674f5b85b1766f61b84d1 https://www.encodeproject.org/files/ENCFF774YIJ/@@download/ENCFF774YIJ.bigWig hg19 released low read depth, low read length ENCFF978NDZ bigWig fold change over control ENCSR754ZHU ChIP-seq EFO:0002067 K562 cell line Homo sapiens SNRNP70-human ENCAB649NDD DNA SDS formaldehyde False 2017-02-27 ENCODE 2 ENCFF546AFS, ENCFF705ZEH 361651377 ENCODE Processing Pipeline 90c715b3fdcb969d328b8ef576038120 https://www.encodeproject.org/files/ENCFF978NDZ/@@download/ENCFF978NDZ.bigWig hg19 released low read depth, low read length ENCFF626AAZ bed narrowPeak peaks ENCSR754ZHU ChIP-seq EFO:0002067 K562 cell line Homo sapiens SNRNP70-human ENCAB649NDD DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF477SGV, ENCFF546AFS, ENCFF551QCK, ENCFF705ZEH 6248155 ENCODE Processing Pipeline 3c16a9fa34574cb39077b028da90d179 https://www.encodeproject.org/files/ENCFF626AAZ/@@download/ENCFF626AAZ.bed.gz hg19 released low read depth, low read length ENCFF166CCA bigBed narrowPeak peaks ENCSR754ZHU ChIP-seq EFO:0002067 K562 cell line Homo sapiens SNRNP70-human ENCAB649NDD DNA SDS formaldehyde False 2017-02-27 ENCODE 1 ENCFF769MWV 10752509 ENCODE Processing Pipeline 143d248c87cd346f22b1dd03a507572b https://www.encodeproject.org/files/ENCFF166CCA/@@download/ENCFF166CCA.bigBed hg19 released low read depth, low read length ENCFF152KZE bigBed narrowPeak peaks ENCSR754ZHU ChIP-seq EFO:0002067 K562 cell line Homo sapiens SNRNP70-human ENCAB649NDD DNA SDS formaldehyde False 2017-02-27 ENCODE 2 ENCFF622THV 10810877 ENCODE Processing Pipeline 41f2e4cd708f2a2f1bf353e093f3a643 https://www.encodeproject.org/files/ENCFF152KZE/@@download/ENCFF152KZE.bigBed hg19 released low read depth, low read length ENCFF260IOV bed narrowPeak conservative idr thresholded peaks ENCSR754ZHU ChIP-seq EFO:0002067 K562 cell line Homo sapiens SNRNP70-human ENCAB649NDD DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF001TDO, ENCFF622THV, ENCFF626AAZ, ENCFF769MWV 15938 ENCODE Processing Pipeline d8b65e9cb8984b6f9c549de80aa8b6ae https://www.encodeproject.org/files/ENCFF260IOV/@@download/ENCFF260IOV.bed.gz hg19 released low read depth, low read length ENCFF206MLH bigBed narrowPeak optimal idr thresholded peaks ENCSR754ZHU ChIP-seq EFO:0002067 K562 cell line Homo sapiens SNRNP70-human ENCAB649NDD DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF033KXY 110897 ENCODE Processing Pipeline d32fd83cbcb21157e24518be14c3543b https://www.encodeproject.org/files/ENCFF206MLH/@@download/ENCFF206MLH.bigBed hg19 released low read depth, low read length ENCFF033KXY bed narrowPeak optimal idr thresholded peaks ENCSR754ZHU ChIP-seq EFO:0002067 K562 cell line Homo sapiens SNRNP70-human ENCAB649NDD DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF001TDO, ENCFF622THV, ENCFF626AAZ, ENCFF769MWV 17570 ENCODE Processing Pipeline c90f03895f7cadf139446946d20832a2 https://www.encodeproject.org/files/ENCFF033KXY/@@download/ENCFF033KXY.bed.gz hg19 released low read depth, low read length ENCFF786WEP bigWig signal p-value ENCSR754ZHU ChIP-seq EFO:0002067 K562 cell line Homo sapiens SNRNP70-human ENCAB649NDD DNA SDS formaldehyde False 2017-02-27 ENCODE 2 ENCFF198JCQ, ENCFF372NDR 428764078 ENCODE Processing Pipeline 8788aa4f25a37dfd83bd028659ccc6d1 https://www.encodeproject.org/files/ENCFF786WEP/@@download/ENCFF786WEP.bigWig GRCh38 released low read depth, low read length ENCFF362RUB bigWig signal p-value ENCSR754ZHU ChIP-seq EFO:0002067 K562 cell line Homo sapiens SNRNP70-human ENCAB649NDD DNA SDS formaldehyde False 2017-02-27 ENCODE 1 ENCFF157WFG, ENCFF308PSW 408799170 ENCODE Processing Pipeline e913a469738019edaff28fafac0a7bd7 https://www.encodeproject.org/files/ENCFF362RUB/@@download/ENCFF362RUB.bigWig GRCh38 released low read depth, low read length ENCFF800WMI bed narrowPeak peaks ENCSR754ZHU ChIP-seq EFO:0002067 K562 cell line Homo sapiens SNRNP70-human ENCAB649NDD DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF157WFG, ENCFF198JCQ, ENCFF308PSW, ENCFF372NDR 6174033 ENCODE Processing Pipeline f09ca1add0a3c8a3e067abfbd6b89d62 https://www.encodeproject.org/files/ENCFF800WMI/@@download/ENCFF800WMI.bed.gz GRCh38 released low read depth, low read length ENCFF105WKL bigWig signal p-value ENCSR754ZHU ChIP-seq EFO:0002067 K562 cell line Homo sapiens SNRNP70-human ENCAB649NDD DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF157WFG, ENCFF198JCQ, ENCFF308PSW, ENCFF372NDR 905615341 ENCODE Processing Pipeline 7bef40121ba35fbe1d3686bd3fde61b2 https://www.encodeproject.org/files/ENCFF105WKL/@@download/ENCFF105WKL.bigWig GRCh38 released low read depth, low read length ENCFF996CLC bigWig fold change over control ENCSR754ZHU ChIP-seq EFO:0002067 K562 cell line Homo sapiens SNRNP70-human ENCAB649NDD DNA SDS formaldehyde False 2017-02-27 ENCODE 1 ENCFF157WFG, ENCFF308PSW 350217514 ENCODE Processing Pipeline e9dd2a2abd7842bc3263834b838aad74 https://www.encodeproject.org/files/ENCFF996CLC/@@download/ENCFF996CLC.bigWig GRCh38 released low read depth, low read length ENCFF586LJA bed narrowPeak peaks ENCSR754ZHU ChIP-seq EFO:0002067 K562 cell line Homo sapiens SNRNP70-human ENCAB649NDD DNA SDS formaldehyde False 2017-02-27 ENCODE 1 ENCFF157WFG, ENCFF308PSW 4739769 ENCODE Processing Pipeline a6d62eb90700bcdbdf231a363865a1d7 https://www.encodeproject.org/files/ENCFF586LJA/@@download/ENCFF586LJA.bed.gz GRCh38 released low read depth, low read length ENCFF363KCU bed narrowPeak peaks ENCSR754ZHU ChIP-seq EFO:0002067 K562 cell line Homo sapiens SNRNP70-human ENCAB649NDD DNA SDS formaldehyde False 2017-02-27 ENCODE 2 ENCFF198JCQ, ENCFF372NDR 4768721 ENCODE Processing Pipeline 2395d1b3d24901d47d59648c74974b6d https://www.encodeproject.org/files/ENCFF363KCU/@@download/ENCFF363KCU.bed.gz GRCh38 released low read depth, low read length ENCFF896TLD bigBed narrowPeak peaks ENCSR754ZHU ChIP-seq EFO:0002067 K562 cell line Homo sapiens SNRNP70-human ENCAB649NDD DNA SDS formaldehyde False 2017-02-27 ENCODE 1 ENCFF586LJA 10762763 ENCODE Processing Pipeline e670d71357977499483d7e892d8bacec https://www.encodeproject.org/files/ENCFF896TLD/@@download/ENCFF896TLD.bigBed GRCh38 released low read depth, low read length ENCFF725OUP bigBed narrowPeak peaks ENCSR754ZHU ChIP-seq EFO:0002067 K562 cell line Homo sapiens SNRNP70-human ENCAB649NDD DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF800WMI 13307560 ENCODE Processing Pipeline 6cc68de5ae981661b9dead7e2ee19d0f https://www.encodeproject.org/files/ENCFF725OUP/@@download/ENCFF725OUP.bigBed GRCh38 released low read depth, low read length ENCFF404SDU bigWig fold change over control ENCSR754ZHU ChIP-seq EFO:0002067 K562 cell line Homo sapiens SNRNP70-human ENCAB649NDD DNA SDS formaldehyde False 2017-02-27 ENCODE 2 ENCFF198JCQ, ENCFF372NDR 362469625 ENCODE Processing Pipeline c2b8cccebc07c42081ed6d6930fc99e4 https://www.encodeproject.org/files/ENCFF404SDU/@@download/ENCFF404SDU.bigWig GRCh38 released low read depth, low read length ENCFF962YWD bigWig fold change over control ENCSR754ZHU ChIP-seq EFO:0002067 K562 cell line Homo sapiens SNRNP70-human ENCAB649NDD DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF157WFG, ENCFF198JCQ, ENCFF308PSW, ENCFF372NDR 779517377 ENCODE Processing Pipeline a9ea9b98fe2b5b64b2aaaf4f99dd9e0c https://www.encodeproject.org/files/ENCFF962YWD/@@download/ENCFF962YWD.bigWig GRCh38 released low read depth, low read length ENCFF206MJS bed narrowPeak optimal idr thresholded peaks ENCSR754ZHU ChIP-seq EFO:0002067 K562 cell line Homo sapiens SNRNP70-human ENCAB649NDD DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF363KCU, ENCFF419RSJ, ENCFF586LJA, ENCFF800WMI 15551 ENCODE Processing Pipeline 02b18c003378b3efe5b4b035dcd08b15 https://www.encodeproject.org/files/ENCFF206MJS/@@download/ENCFF206MJS.bed.gz GRCh38 released low read depth, low read length ENCFF470XDL bigBed narrowPeak optimal idr thresholded peaks ENCSR754ZHU ChIP-seq EFO:0002067 K562 cell line Homo sapiens SNRNP70-human ENCAB649NDD DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF206MJS 107452 ENCODE Processing Pipeline 40fb814940d439a21b1f9fac92466396 https://www.encodeproject.org/files/ENCFF470XDL/@@download/ENCFF470XDL.bigBed GRCh38 released low read depth, low read length ENCFF352GQK bigBed narrowPeak peaks ENCSR754ZHU ChIP-seq EFO:0002067 K562 cell line Homo sapiens SNRNP70-human ENCAB649NDD DNA SDS formaldehyde False 2017-02-27 ENCODE 2 ENCFF363KCU 10796853 ENCODE Processing Pipeline 59aef30ac75f7f5ee8b823eec2cd0b70 https://www.encodeproject.org/files/ENCFF352GQK/@@download/ENCFF352GQK.bigBed GRCh38 released low read depth, low read length ENCFF591EEZ bigBed narrowPeak conservative idr thresholded peaks ENCSR754ZHU ChIP-seq EFO:0002067 K562 cell line Homo sapiens SNRNP70-human ENCAB649NDD DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF012DPW 105040 ENCODE Processing Pipeline 63f1684281b420c1290dbb1245234c76 https://www.encodeproject.org/files/ENCFF591EEZ/@@download/ENCFF591EEZ.bigBed GRCh38 released low read depth, low read length ENCFF012DPW bed narrowPeak conservative idr thresholded peaks ENCSR754ZHU ChIP-seq EFO:0002067 K562 cell line Homo sapiens SNRNP70-human ENCAB649NDD DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF363KCU, ENCFF419RSJ, ENCFF586LJA, ENCFF800WMI 14943 ENCODE Processing Pipeline 519d0ea3ca46a1e1658b04d4753b082d https://www.encodeproject.org/files/ENCFF012DPW/@@download/ENCFF012DPW.bed.gz GRCh38 released low read depth, low read length ENCFF000BWG bam alignments ENCSR000AQE ChIP-seq EFO:0002067 K562 cell line Homo sapiens EZH2-human ENCAB000AGH DNA see document see document False 2012-03-06 ENCODE 1 ENCFF000BWQ 1888402715 Bradley Bernstein, Broad be2deac429d566474c91c3574752d04f https://www.encodeproject.org/files/ENCFF000BWG/@@download/ENCFF000BWG.bam hg19 archived inconsistent platforms, low read depth, mild to moderate bottlenecking, low read length ENCFF000BWH bam alignments ENCSR000AQE ChIP-seq EFO:0002067 K562 cell line Homo sapiens EZH2-human ENCAB000AGH DNA see document see document False 2012-03-06 ENCODE 2 ENCFF000BWS 1080238221 Bradley Bernstein, Broad db037e71ad56c7e540c6649a6a40d89b https://www.encodeproject.org/files/ENCFF000BWH/@@download/ENCFF000BWH.bam hg19 archived inconsistent platforms, low read depth, mild to moderate bottlenecking, low read length ENCFF000BWI bigBed broadPeak peaks ENCSR000AQE ChIP-seq EFO:0002067 K562 cell line Homo sapiens EZH2-human ENCAB000AGH DNA see document see document False 2012-03-06 ENCODE ENCFF001SZC 1597327 Bradley Bernstein, Broad 62546cdf9765da6038ca483054f63237 https://www.encodeproject.org/files/ENCFF000BWI/@@download/ENCFF000BWI.bigBed hg19 archived inconsistent platforms, low read depth, mild to moderate bottlenecking, low read length ENCFF000BWL bigWig signal ENCSR000AQE ChIP-seq EFO:0002067 K562 cell line Homo sapiens EZH2-human ENCAB000AGH DNA see document see document False 2012-03-06 ENCODE 539156683 Bradley Bernstein, Broad 9bdf50d759e639de5fa9bdcef9b8599a https://www.encodeproject.org/files/ENCFF000BWL/@@download/ENCFF000BWL.bigWig hg19 archived inconsistent platforms, low read depth, mild to moderate bottlenecking, low read length missing derived_from ENCFF000BWQ fastq reads ENCSR000AQE ChIP-seq EFO:0002067 K562 cell line Homo sapiens EZH2-human ENCAB000AGH DNA see document see document False 2012-03-06 ENCODE 1 1 36 single-ended 1992897436 Bradley Bernstein, Broad 0d58c404f4d2209fe4383af22cff55fe https://www.encodeproject.org/files/ENCFF000BWQ/@@download/ENCFF000BWQ.fastq.gz Illumina Genome Analyzer /files/ENCFF000BWK/ released inconsistent platforms, low read depth, mild to moderate bottlenecking, low read length ENCFF000BWS fastq reads ENCSR000AQE ChIP-seq EFO:0002067 K562 cell line Homo sapiens EZH2-human ENCAB000AGH DNA see document see document False 2012-03-06 ENCODE 2 1 36 single-ended 1267870247 Bradley Bernstein, Broad 01d76e5ad412c591fa2bc15ef94c29d7 https://www.encodeproject.org/files/ENCFF000BWS/@@download/ENCFF000BWS.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000BWK/ released inconsistent platforms, low read depth, mild to moderate bottlenecking, low read length ENCFF001SZC bed broadPeak peaks ENCSR000AQE ChIP-seq EFO:0002067 K562 cell line Homo sapiens EZH2-human ENCAB000AGH DNA see document see document False 2012-03-06 ENCODE 942460 Bradley Bernstein, Broad a289d82fada7e12137bc7657e207a543 https://www.encodeproject.org/files/ENCFF001SZC/@@download/ENCFF001SZC.bed.gz hg19 archived inconsistent platforms, low read depth, mild to moderate bottlenecking, low read length missing derived_from ENCFF002CEM bed narrowPeak optimal idr thresholded peaks ENCSR000AQE ChIP-seq EFO:0002067 K562 cell line Homo sapiens EZH2-human ENCAB000AGH DNA see document see document False 2012-03-06 ENCODE 45174 ENCODE Consortium Analysis Working Group 74f6a178b30866dcc4cb2563536ecc37 https://www.encodeproject.org/files/ENCFF002CEM/@@download/ENCFF002CEM.bed.gz hg19 archived inconsistent platforms, low read depth, mild to moderate bottlenecking, low read length missing derived_from ENCFF464QCZ bigBed narrowPeak optimal idr thresholded peaks ENCSR000AQE ChIP-seq EFO:0002067 K562 cell line Homo sapiens EZH2-human ENCAB000AGH DNA see document see document False 2012-03-06 ENCODE ENCFF002CEM 189416 ENCODE Consortium 7520a6825e9162805699397881a29938 https://www.encodeproject.org/files/ENCFF464QCZ/@@download/ENCFF464QCZ.bigBed hg19 archived inconsistent platforms, low read depth, mild to moderate bottlenecking, low read length ENCFF772XOJ bam unfiltered alignments ENCSR000AQE ChIP-seq EFO:0002067 K562 cell line Homo sapiens EZH2-human ENCAB000AGH DNA see document see document False 2012-03-06 ENCODE 2 36 ENCFF000BWS, ENCFF643CGH 1570900330 ENCODE Processing Pipeline 0e7d0a5e61b343e4e481d6cf37a1d5cc https://www.encodeproject.org/files/ENCFF772XOJ/@@download/ENCFF772XOJ.bam GRCh38 released inconsistent platforms, low read depth, mild to moderate bottlenecking, low read length ENCFF912PNB bam alignments ENCSR000AQE ChIP-seq EFO:0002067 K562 cell line Homo sapiens EZH2-human ENCAB000AGH DNA see document see document False 2012-03-06 ENCODE 2 36 ENCFF000BWS, ENCFF643CGH 900047391 ENCODE Processing Pipeline 4824332d28efbc124bf5727063a8e558 https://www.encodeproject.org/files/ENCFF912PNB/@@download/ENCFF912PNB.bam GRCh38 released inconsistent platforms, low read depth, mild to moderate bottlenecking, low read length ENCFF495WQM bam unfiltered alignments ENCSR000AQE ChIP-seq EFO:0002067 K562 cell line Homo sapiens EZH2-human ENCAB000AGH DNA see document see document False 2012-03-06 ENCODE 1 36 ENCFF000BWQ, ENCFF643CGH 2546240418 ENCODE Processing Pipeline f8b92ed26ebe9aa9d2c0ff0fbe6a7cd5 https://www.encodeproject.org/files/ENCFF495WQM/@@download/ENCFF495WQM.bam GRCh38 released inconsistent platforms, low read depth, mild to moderate bottlenecking, low read length ENCFF678EGD bam alignments ENCSR000AQE ChIP-seq EFO:0002067 K562 cell line Homo sapiens EZH2-human ENCAB000AGH DNA see document see document False 2012-03-06 ENCODE 1 36 ENCFF000BWQ, ENCFF643CGH 1695109218 ENCODE Processing Pipeline b1634cc18d5a679ff0c8e563ee8a9d82 https://www.encodeproject.org/files/ENCFF678EGD/@@download/ENCFF678EGD.bam GRCh38 released inconsistent platforms, low read depth, mild to moderate bottlenecking, low read length ENCFF329JQS bam unfiltered alignments ENCSR000AQE ChIP-seq EFO:0002067 K562 cell line Homo sapiens EZH2-human ENCAB000AGH DNA see document see document False 2012-03-06 ENCODE 2 36 ENCFF000BWS, ENCFF807MUK 1567279056 ENCODE Processing Pipeline 211d12c60a2392e824bd652fa42e94b1 https://www.encodeproject.org/files/ENCFF329JQS/@@download/ENCFF329JQS.bam hg19 released inconsistent platforms, low read depth, mild to moderate bottlenecking, low read length ENCFF257UWF bam alignments ENCSR000AQE ChIP-seq EFO:0002067 K562 cell line Homo sapiens EZH2-human ENCAB000AGH DNA see document see document False 2012-03-06 ENCODE 2 36 ENCFF000BWS, ENCFF807MUK 900676765 ENCODE Processing Pipeline 071a32ff38ef69a169feb00c58debb59 https://www.encodeproject.org/files/ENCFF257UWF/@@download/ENCFF257UWF.bam hg19 released inconsistent platforms, low read depth, mild to moderate bottlenecking, low read length ENCFF779PUK bam unfiltered alignments ENCSR000AQE ChIP-seq EFO:0002067 K562 cell line Homo sapiens EZH2-human ENCAB000AGH DNA see document see document False 2012-03-06 ENCODE 1 36 ENCFF000BWQ, ENCFF807MUK 2533389995 ENCODE Processing Pipeline 90aa1613d2a4c4ffbf718ad310dc2142 https://www.encodeproject.org/files/ENCFF779PUK/@@download/ENCFF779PUK.bam hg19 released inconsistent platforms, low read depth, mild to moderate bottlenecking, low read length ENCFF083IDB bam alignments ENCSR000AQE ChIP-seq EFO:0002067 K562 cell line Homo sapiens EZH2-human ENCAB000AGH DNA see document see document False 2012-03-06 ENCODE 1 36 ENCFF000BWQ, ENCFF807MUK 1695980985 ENCODE Processing Pipeline 4ee9a816507173b77954ff0bf634906f https://www.encodeproject.org/files/ENCFF083IDB/@@download/ENCFF083IDB.bam hg19 released inconsistent platforms, low read depth, mild to moderate bottlenecking, low read length ENCFF345SRH fastq reads ENCSR112RNT ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPLL-human ENCAB698BTS DNA SDS formaldehyde False 2017-12-01 ENCODE 1 1 40 single-ended 1797300253 Xiang-Dong Fu, UCSD d56696c96b86f270f971e4def07e43bc https://www.encodeproject.org/files/ENCFF345SRH/@@download/ENCFF345SRH.fastq.gz Illumina HiSeq 2500 /files/ENCFF089EYX/ released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF218JDY fastq reads ENCSR112RNT ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPLL-human ENCAB698BTS DNA SDS formaldehyde False 2017-12-01 ENCODE 2 1 40 single-ended 1969891716 Xiang-Dong Fu, UCSD 4235c8249200d9b97a96e0ad2f4df78a https://www.encodeproject.org/files/ENCFF218JDY/@@download/ENCFF218JDY.fastq.gz Illumina HiSeq 2500 /files/ENCFF419XJY/ released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF201JRP bam unfiltered alignments ENCSR112RNT ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPLL-human ENCAB698BTS DNA SDS formaldehyde False 2017-12-01 ENCODE 1 40 ENCFF345SRH, ENCFF643CGH 2120097104 ENCODE Processing Pipeline 947fa1e69138a6980c48f100585c2756 https://www.encodeproject.org/files/ENCFF201JRP/@@download/ENCFF201JRP.bam GRCh38 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF994GKJ bam alignments ENCSR112RNT ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPLL-human ENCAB698BTS DNA SDS formaldehyde False 2017-12-01 ENCODE 1 40 ENCFF345SRH, ENCFF643CGH 725130559 ENCODE Processing Pipeline eff8c8a18ad446560b3d437847852a89 https://www.encodeproject.org/files/ENCFF994GKJ/@@download/ENCFF994GKJ.bam GRCh38 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF768SVS bam alignments ENCSR112RNT ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPLL-human ENCAB698BTS DNA SDS formaldehyde False 2017-12-01 ENCODE 1 40 ENCFF345SRH, ENCFF807MUK 726011145 ENCODE Processing Pipeline c94e4789b3ef262f66f0e77b3c2b6ee7 https://www.encodeproject.org/files/ENCFF768SVS/@@download/ENCFF768SVS.bam hg19 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF820XPW bam unfiltered alignments ENCSR112RNT ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPLL-human ENCAB698BTS DNA SDS formaldehyde False 2017-12-01 ENCODE 1 40 ENCFF345SRH, ENCFF807MUK 2109342775 ENCODE Processing Pipeline 1c52261caee59571dc70e331771d3cb5 https://www.encodeproject.org/files/ENCFF820XPW/@@download/ENCFF820XPW.bam hg19 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF247AFE bam unfiltered alignments ENCSR112RNT ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPLL-human ENCAB698BTS DNA SDS formaldehyde False 2017-12-01 ENCODE 2 40 ENCFF218JDY, ENCFF807MUK 2171003149 ENCODE Processing Pipeline ae99ab4c79cd97bc0a3b59dc2eb32b30 https://www.encodeproject.org/files/ENCFF247AFE/@@download/ENCFF247AFE.bam hg19 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF813JWE bam alignments ENCSR112RNT ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPLL-human ENCAB698BTS DNA SDS formaldehyde False 2017-12-01 ENCODE 2 40 ENCFF218JDY, ENCFF807MUK 541808386 ENCODE Processing Pipeline 8fd2cd7abb23355537c1be2a01bd212b https://www.encodeproject.org/files/ENCFF813JWE/@@download/ENCFF813JWE.bam hg19 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF424HUP bam unfiltered alignments ENCSR112RNT ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPLL-human ENCAB698BTS DNA SDS formaldehyde False 2017-12-01 ENCODE 2 40 ENCFF218JDY, ENCFF643CGH 2182585936 ENCODE Processing Pipeline 576a0f58bb636e8597305ea35be28b30 https://www.encodeproject.org/files/ENCFF424HUP/@@download/ENCFF424HUP.bam GRCh38 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF909BWR bam alignments ENCSR112RNT ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPLL-human ENCAB698BTS DNA SDS formaldehyde False 2017-12-01 ENCODE 2 40 ENCFF218JDY, ENCFF643CGH 541016935 ENCODE Processing Pipeline ebb1189a00352b0c6c8a4128b03aa7f5 https://www.encodeproject.org/files/ENCFF909BWR/@@download/ENCFF909BWR.bam GRCh38 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF343WVR bigWig signal p-value ENCSR112RNT ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPLL-human ENCAB698BTS DNA SDS formaldehyde False 2017-12-01 ENCODE 1 ENCFF456BYT, ENCFF768SVS 553554309 ENCODE Processing Pipeline b1e8ab237cc163018ec7534b3a7ed1ab https://www.encodeproject.org/files/ENCFF343WVR/@@download/ENCFF343WVR.bigWig hg19 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF250BGK bigWig fold change over control ENCSR112RNT ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPLL-human ENCAB698BTS DNA SDS formaldehyde False 2017-12-01 ENCODE 1 ENCFF456BYT, ENCFF768SVS 493825867 ENCODE Processing Pipeline 678b6bf1ddb2baa4f7f52b30d53e1931 https://www.encodeproject.org/files/ENCFF250BGK/@@download/ENCFF250BGK.bigWig hg19 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF013TMO bigWig signal p-value ENCSR112RNT ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPLL-human ENCAB698BTS DNA SDS formaldehyde False 2017-12-01 ENCODE 2 ENCFF321CYT, ENCFF813JWE 507995060 ENCODE Processing Pipeline 869435bb3c19a748e3dfa982d120f27f https://www.encodeproject.org/files/ENCFF013TMO/@@download/ENCFF013TMO.bigWig hg19 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF553QWJ bigWig signal p-value ENCSR112RNT ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPLL-human ENCAB698BTS DNA SDS formaldehyde False 2017-12-01 ENCODE 1, 2 ENCFF321CYT, ENCFF456BYT, ENCFF768SVS, ENCFF813JWE 1003623559 ENCODE Processing Pipeline e74fb144b3747403b447d1a2c0ed7f39 https://www.encodeproject.org/files/ENCFF553QWJ/@@download/ENCFF553QWJ.bigWig hg19 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF987VPA bigWig fold change over control ENCSR112RNT ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPLL-human ENCAB698BTS DNA SDS formaldehyde False 2017-12-01 ENCODE 2 ENCFF321CYT, ENCFF813JWE 407644213 ENCODE Processing Pipeline b1c9c0e9554a4c10159939d2a1d54b0a https://www.encodeproject.org/files/ENCFF987VPA/@@download/ENCFF987VPA.bigWig hg19 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF973NPC bigWig fold change over control ENCSR112RNT ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPLL-human ENCAB698BTS DNA SDS formaldehyde False 2017-12-01 ENCODE 1, 2 ENCFF321CYT, ENCFF456BYT, ENCFF768SVS, ENCFF813JWE 1011935722 ENCODE Processing Pipeline 55eea1c90cbeeb6047a6cded8004f4d5 https://www.encodeproject.org/files/ENCFF973NPC/@@download/ENCFF973NPC.bigWig hg19 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF433KJT bed narrowPeak peaks ENCSR112RNT ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPLL-human ENCAB698BTS DNA SDS formaldehyde False 2017-12-01 ENCODE 1 ENCFF456BYT, ENCFF768SVS 6278109 ENCODE Processing Pipeline 8949bddbdc88054247ad6b4ee81e1e64 https://www.encodeproject.org/files/ENCFF433KJT/@@download/ENCFF433KJT.bed.gz hg19 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF456UCJ bigBed narrowPeak peaks ENCSR112RNT ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPLL-human ENCAB698BTS DNA SDS formaldehyde False 2017-12-01 ENCODE 2 ENCFF657LPF 13050032 ENCODE Processing Pipeline f7a0beb170bbfbb99d94d06e174b9aee https://www.encodeproject.org/files/ENCFF456UCJ/@@download/ENCFF456UCJ.bigBed hg19 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF236YAX bigBed narrowPeak conservative idr thresholded peaks ENCSR112RNT ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPLL-human ENCAB698BTS DNA SDS formaldehyde False 2017-12-01 ENCODE 1, 2 ENCFF069FZQ 583999 ENCODE Processing Pipeline 042ec71d01615e7a24d6ffc28e13a106 https://www.encodeproject.org/files/ENCFF236YAX/@@download/ENCFF236YAX.bigBed hg19 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF343RFS bed narrowPeak peaks ENCSR112RNT ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPLL-human ENCAB698BTS DNA SDS formaldehyde False 2017-12-01 ENCODE 1, 2 ENCFF321CYT, ENCFF456BYT, ENCFF768SVS, ENCFF813JWE 7138041 ENCODE Processing Pipeline f89a0bb73afe906b16e3e34f10d11a16 https://www.encodeproject.org/files/ENCFF343RFS/@@download/ENCFF343RFS.bed.gz hg19 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF069FZQ bed narrowPeak conservative idr thresholded peaks ENCSR112RNT ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPLL-human ENCAB698BTS DNA SDS formaldehyde False 2017-12-01 ENCODE 1, 2 ENCFF001TDO, ENCFF343RFS, ENCFF433KJT, ENCFF657LPF 254351 ENCODE Processing Pipeline 66447ac005b80da088e421b4642fb716 https://www.encodeproject.org/files/ENCFF069FZQ/@@download/ENCFF069FZQ.bed.gz hg19 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF657LPF bed narrowPeak peaks ENCSR112RNT ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPLL-human ENCAB698BTS DNA SDS formaldehyde False 2017-12-01 ENCODE 2 ENCFF321CYT, ENCFF813JWE 6083473 ENCODE Processing Pipeline bce63864da546534586631a4ae6e039a https://www.encodeproject.org/files/ENCFF657LPF/@@download/ENCFF657LPF.bed.gz hg19 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF431UER bigBed narrowPeak peaks ENCSR112RNT ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPLL-human ENCAB698BTS DNA SDS formaldehyde False 2017-12-01 ENCODE 1 ENCFF433KJT 13070368 ENCODE Processing Pipeline 92f67c174f5a3ce6b375c5f05dadea3f https://www.encodeproject.org/files/ENCFF431UER/@@download/ENCFF431UER.bigBed hg19 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF156DEC bigBed narrowPeak peaks ENCSR112RNT ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPLL-human ENCAB698BTS DNA SDS formaldehyde False 2017-12-01 ENCODE 1, 2 ENCFF343RFS 12972437 ENCODE Processing Pipeline 585d81adbc78d8edf94d97c80feb60d4 https://www.encodeproject.org/files/ENCFF156DEC/@@download/ENCFF156DEC.bigBed hg19 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF122QSN bed narrowPeak optimal idr thresholded peaks ENCSR112RNT ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPLL-human ENCAB698BTS DNA SDS formaldehyde False 2017-12-01 ENCODE 1, 2 ENCFF001TDO, ENCFF343RFS, ENCFF433KJT, ENCFF657LPF 273665 ENCODE Processing Pipeline 45e71ff27266791196cebd444eafddf2 https://www.encodeproject.org/files/ENCFF122QSN/@@download/ENCFF122QSN.bed.gz hg19 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF039WOE bigBed narrowPeak optimal idr thresholded peaks ENCSR112RNT ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPLL-human ENCAB698BTS DNA SDS formaldehyde False 2017-12-01 ENCODE 1, 2 ENCFF122QSN 614329 ENCODE Processing Pipeline 1b27e0822dfe58c3bb2e26f48189ac3f https://www.encodeproject.org/files/ENCFF039WOE/@@download/ENCFF039WOE.bigBed hg19 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF562PTA bigWig signal p-value ENCSR112RNT ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPLL-human ENCAB698BTS DNA SDS formaldehyde False 2017-12-01 ENCODE 1 ENCFF661ZRO, ENCFF994GKJ 576809157 ENCODE Processing Pipeline 8084a6ae12853f6667ad07197f3f156b https://www.encodeproject.org/files/ENCFF562PTA/@@download/ENCFF562PTA.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF266ZJD bigWig signal p-value ENCSR112RNT ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPLL-human ENCAB698BTS DNA SDS formaldehyde False 2017-12-01 ENCODE 2 ENCFF872FDX, ENCFF909BWR 533388514 ENCODE Processing Pipeline 53c0d67a4d0e757214f372fdf27b029a https://www.encodeproject.org/files/ENCFF266ZJD/@@download/ENCFF266ZJD.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF886ZRM bigWig fold change over control ENCSR112RNT ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPLL-human ENCAB698BTS DNA SDS formaldehyde False 2017-12-01 ENCODE 1 ENCFF661ZRO, ENCFF994GKJ 493210990 ENCODE Processing Pipeline 2ae18858abcf849865d4e5adb820e961 https://www.encodeproject.org/files/ENCFF886ZRM/@@download/ENCFF886ZRM.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF694KEE bigWig signal p-value ENCSR112RNT ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPLL-human ENCAB698BTS DNA SDS formaldehyde False 2017-12-01 ENCODE 1, 2 ENCFF661ZRO, ENCFF872FDX, ENCFF909BWR, ENCFF994GKJ 1081201270 ENCODE Processing Pipeline a68f6340f288717f25b663bded2c5842 https://www.encodeproject.org/files/ENCFF694KEE/@@download/ENCFF694KEE.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF105DAM bigWig fold change over control ENCSR112RNT ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPLL-human ENCAB698BTS DNA SDS formaldehyde False 2017-12-01 ENCODE 2 ENCFF872FDX, ENCFF909BWR 413582349 ENCODE Processing Pipeline 90bb2c9c478a6af85b1a2e9caf829db4 https://www.encodeproject.org/files/ENCFF105DAM/@@download/ENCFF105DAM.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF779GAL bigWig fold change over control ENCSR112RNT ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPLL-human ENCAB698BTS DNA SDS formaldehyde False 2017-12-01 ENCODE 1, 2 ENCFF661ZRO, ENCFF872FDX, ENCFF909BWR, ENCFF994GKJ 1024352164 ENCODE Processing Pipeline b04480121797181a8f53f3c84fad9b54 https://www.encodeproject.org/files/ENCFF779GAL/@@download/ENCFF779GAL.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF479DMK bed narrowPeak peaks ENCSR112RNT ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPLL-human ENCAB698BTS DNA SDS formaldehyde False 2017-12-01 ENCODE 1 ENCFF661ZRO, ENCFF994GKJ 6285227 ENCODE Processing Pipeline 5f3a941ed3014e4ec45c978acdac785e https://www.encodeproject.org/files/ENCFF479DMK/@@download/ENCFF479DMK.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF087YUB bed narrowPeak peaks ENCSR112RNT ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPLL-human ENCAB698BTS DNA SDS formaldehyde False 2017-12-01 ENCODE 2 ENCFF872FDX, ENCFF909BWR 6133964 ENCODE Processing Pipeline 8939029ef4e91c34edafb404f4f0a383 https://www.encodeproject.org/files/ENCFF087YUB/@@download/ENCFF087YUB.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF755UFL bigBed narrowPeak peaks ENCSR112RNT ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPLL-human ENCAB698BTS DNA SDS formaldehyde False 2017-12-01 ENCODE 2 ENCFF087YUB 13059308 ENCODE Processing Pipeline c0f638dc5e3d4caebc12dad92f3330f8 https://www.encodeproject.org/files/ENCFF755UFL/@@download/ENCFF755UFL.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF391GBE bed narrowPeak peaks ENCSR112RNT ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPLL-human ENCAB698BTS DNA SDS formaldehyde False 2017-12-01 ENCODE 1, 2 ENCFF661ZRO, ENCFF872FDX, ENCFF909BWR, ENCFF994GKJ 7151787 ENCODE Processing Pipeline 2d2784b38934ec15adf49ea86c8e7358 https://www.encodeproject.org/files/ENCFF391GBE/@@download/ENCFF391GBE.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF481EBR bigBed narrowPeak peaks ENCSR112RNT ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPLL-human ENCAB698BTS DNA SDS formaldehyde False 2017-12-01 ENCODE 1 ENCFF479DMK 13090478 ENCODE Processing Pipeline 3259463ec78614a7d163ddde92f7926e https://www.encodeproject.org/files/ENCFF481EBR/@@download/ENCFF481EBR.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF306RJB bigBed narrowPeak peaks ENCSR112RNT ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPLL-human ENCAB698BTS DNA SDS formaldehyde False 2017-12-01 ENCODE 1, 2 ENCFF391GBE 12990724 ENCODE Processing Pipeline a050ca791fc1e58d89f0d72b875c927c https://www.encodeproject.org/files/ENCFF306RJB/@@download/ENCFF306RJB.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF107VTI bed narrowPeak conservative idr thresholded peaks ENCSR112RNT ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPLL-human ENCAB698BTS DNA SDS formaldehyde False 2017-12-01 ENCODE 1, 2 ENCFF087YUB, ENCFF391GBE, ENCFF419RSJ, ENCFF479DMK 257379 ENCODE Processing Pipeline af2d63a4f3521d98358aaa9d1b629552 https://www.encodeproject.org/files/ENCFF107VTI/@@download/ENCFF107VTI.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF662WPN bed narrowPeak optimal idr thresholded peaks ENCSR112RNT ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPLL-human ENCAB698BTS DNA SDS formaldehyde False 2017-12-01 ENCODE 1, 2 ENCFF087YUB, ENCFF391GBE, ENCFF419RSJ, ENCFF479DMK 273144 ENCODE Processing Pipeline c62ec7b0e5aa0d3196d5f29a760c10fe https://www.encodeproject.org/files/ENCFF662WPN/@@download/ENCFF662WPN.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF642HUK bigBed narrowPeak conservative idr thresholded peaks ENCSR112RNT ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPLL-human ENCAB698BTS DNA SDS formaldehyde False 2017-12-01 ENCODE 1, 2 ENCFF107VTI 589925 ENCODE Processing Pipeline 69b54d6a15cf14b364029b4cb7445a36 https://www.encodeproject.org/files/ENCFF642HUK/@@download/ENCFF642HUK.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF541ZGX bigBed narrowPeak optimal idr thresholded peaks ENCSR112RNT ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPLL-human ENCAB698BTS DNA SDS formaldehyde False 2017-12-01 ENCODE 1, 2 ENCFF662WPN 614991 ENCODE Processing Pipeline 5f653735c66cf1156f1139feef290c6a https://www.encodeproject.org/files/ENCFF541ZGX/@@download/ENCFF541ZGX.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF610TGH fastq reads ENCSR334HSW ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF318-human ENCAB295BCT DNA False 2016-09-27 ENCODE 1 1 100 paired-ended 1 ENCFF976NWF 4216119209 Michael Snyder, Stanford f538395551c9a9b09279407180b17b0c SRA:SRR5111458 https://www.encodeproject.org/files/ENCFF610TGH/@@download/ENCFF610TGH.fastq.gz Illumina HiSeq 4000 /files/ENCFF498JMO/ released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF187NIJ fastq reads ENCSR334HSW ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF318-human ENCAB295BCT DNA False 2016-09-27 ENCODE 2 1 100 paired-ended 1 ENCFF252HPP 3281748579 Michael Snyder, Stanford 494d5ac79c228a366333a27a05c4445c SRA:SRR5111457 https://www.encodeproject.org/files/ENCFF187NIJ/@@download/ENCFF187NIJ.fastq.gz Illumina HiSeq 4000 /files/ENCFF259GQA/ released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF976NWF fastq reads ENCSR334HSW ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF318-human ENCAB295BCT DNA False 2016-09-27 ENCODE 1 1 100 paired-ended 2 ENCFF610TGH 4690507669 Michael Snyder, Stanford 676c09fe710adfec4b4dc26dd00fa073 SRA:SRR5111458 https://www.encodeproject.org/files/ENCFF976NWF/@@download/ENCFF976NWF.fastq.gz Illumina HiSeq 4000 /files/ENCFF502GTS/ released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF252HPP fastq reads ENCSR334HSW ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF318-human ENCAB295BCT DNA False 2016-09-27 ENCODE 2 1 100 paired-ended 2 ENCFF187NIJ 3613076040 Michael Snyder, Stanford ddb154c312aec26424fb9ac8e90340aa SRA:SRR5111457 https://www.encodeproject.org/files/ENCFF252HPP/@@download/ENCFF252HPP.fastq.gz Illumina HiSeq 4000 /files/ENCFF837MIV/ released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF897DYL bam unfiltered alignments ENCSR334HSW ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF318-human ENCAB295BCT DNA False 2016-09-27 ENCODE 2 100 ENCFF187NIJ, ENCFF252HPP, ENCFF643CGH 6380285558 ENCODE Processing Pipeline 8b7980f9362bf07d6bdccfbf6c3fdde6 https://www.encodeproject.org/files/ENCFF897DYL/@@download/ENCFF897DYL.bam GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF497PYQ bam unfiltered alignments ENCSR334HSW ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF318-human ENCAB295BCT DNA False 2016-09-27 ENCODE 2 100 ENCFF187NIJ, ENCFF252HPP, ENCFF807MUK 6375382667 ENCODE Processing Pipeline 4180af527922068654e5529d0033c6b6 https://www.encodeproject.org/files/ENCFF497PYQ/@@download/ENCFF497PYQ.bam hg19 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF549UDR bam unfiltered alignments ENCSR334HSW ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF318-human ENCAB295BCT DNA False 2016-09-27 ENCODE 1 100 ENCFF610TGH, ENCFF807MUK, ENCFF976NWF 7784401655 ENCODE Processing Pipeline 55953f088f121d29207b763472678b41 https://www.encodeproject.org/files/ENCFF549UDR/@@download/ENCFF549UDR.bam hg19 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF637TXA bam unfiltered alignments ENCSR334HSW ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF318-human ENCAB295BCT DNA False 2016-09-27 ENCODE 1 100 ENCFF610TGH, ENCFF643CGH, ENCFF976NWF 7785555523 ENCODE Processing Pipeline 9964ef37074b6db6d99e5a9a4bc47cde https://www.encodeproject.org/files/ENCFF637TXA/@@download/ENCFF637TXA.bam GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF373YTD bam alignments ENCSR334HSW ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF318-human ENCAB295BCT DNA False 2016-09-27 ENCODE 2 100 ENCFF187NIJ, ENCFF252HPP, ENCFF643CGH 4436394341 ENCODE Processing Pipeline 2323fa2dace3f4875870b7d36d543c46 https://www.encodeproject.org/files/ENCFF373YTD/@@download/ENCFF373YTD.bam GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF974JDO bam alignments ENCSR334HSW ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF318-human ENCAB295BCT DNA False 2016-09-27 ENCODE 2 100 ENCFF187NIJ, ENCFF252HPP, ENCFF807MUK 4433087833 ENCODE Processing Pipeline 0cb53c143f05b3b0cd48e031ef5e511f https://www.encodeproject.org/files/ENCFF974JDO/@@download/ENCFF974JDO.bam hg19 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF720ZIN bam alignments ENCSR334HSW ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF318-human ENCAB295BCT DNA False 2016-09-27 ENCODE 1 100 ENCFF610TGH, ENCFF807MUK, ENCFF976NWF 3988760237 ENCODE Processing Pipeline a2891e9b5373f7dfe5e339726c486b36 https://www.encodeproject.org/files/ENCFF720ZIN/@@download/ENCFF720ZIN.bam hg19 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF304KSV bam alignments ENCSR334HSW ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF318-human ENCAB295BCT DNA False 2016-09-27 ENCODE 1 100 ENCFF610TGH, ENCFF643CGH, ENCFF976NWF 3991286277 ENCODE Processing Pipeline 89a063eea50bdf0037572290b0e1a611 https://www.encodeproject.org/files/ENCFF304KSV/@@download/ENCFF304KSV.bam GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF193YMP bigWig signal p-value ENCSR334HSW ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF318-human ENCAB295BCT DNA False 2016-09-27 ENCODE 1 ENCFF160VXC, ENCFF720ZIN 972854083 ENCODE Processing Pipeline 091aac111e303a4482638c95f0950431 https://www.encodeproject.org/files/ENCFF193YMP/@@download/ENCFF193YMP.bigWig hg19 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF496FIE bigWig signal p-value ENCSR334HSW ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF318-human ENCAB295BCT DNA False 2016-09-27 ENCODE 2 ENCFF834TUP, ENCFF974JDO 1475611776 ENCODE Processing Pipeline e90ccc2f27d461de35626dd892719e70 https://www.encodeproject.org/files/ENCFF496FIE/@@download/ENCFF496FIE.bigWig hg19 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF288KRZ bigWig signal p-value ENCSR334HSW ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF318-human ENCAB295BCT DNA False 2016-09-27 ENCODE 1, 2 ENCFF160VXC, ENCFF720ZIN, ENCFF834TUP, ENCFF974JDO 1913703473 ENCODE Processing Pipeline 59c204e551a710a9b97d8b799e7ff886 https://www.encodeproject.org/files/ENCFF288KRZ/@@download/ENCFF288KRZ.bigWig hg19 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF712QVE bigWig fold change over control ENCSR334HSW ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF318-human ENCAB295BCT DNA False 2016-09-27 ENCODE 2 ENCFF834TUP, ENCFF974JDO 1448139374 ENCODE Processing Pipeline 00b83447bc352dbabc55050c39567227 https://www.encodeproject.org/files/ENCFF712QVE/@@download/ENCFF712QVE.bigWig hg19 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF070JJJ bigWig fold change over control ENCSR334HSW ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF318-human ENCAB295BCT DNA False 2016-09-27 ENCODE 1 ENCFF160VXC, ENCFF720ZIN 1322830164 ENCODE Processing Pipeline 85679190930bb74db0021a7f5b85c6dd https://www.encodeproject.org/files/ENCFF070JJJ/@@download/ENCFF070JJJ.bigWig hg19 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF092NLA bigWig fold change over control ENCSR334HSW ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF318-human ENCAB295BCT DNA False 2016-09-27 ENCODE 1, 2 ENCFF160VXC, ENCFF720ZIN, ENCFF834TUP, ENCFF974JDO 2371873154 ENCODE Processing Pipeline c410b819d84bc1045197ddaa01ea3cbe https://www.encodeproject.org/files/ENCFF092NLA/@@download/ENCFF092NLA.bigWig hg19 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF688JRI bed narrowPeak peaks ENCSR334HSW ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF318-human ENCAB295BCT DNA False 2016-09-27 ENCODE 2 ENCFF834TUP, ENCFF974JDO 6894888 ENCODE Processing Pipeline 793d3c3aaad36a9eb226e1d4420a0d34 https://www.encodeproject.org/files/ENCFF688JRI/@@download/ENCFF688JRI.bed.gz hg19 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF279UBV bigBed narrowPeak peaks ENCSR334HSW ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF318-human ENCAB295BCT DNA False 2016-09-27 ENCODE 1 ENCFF071TPY 10800788 ENCODE Processing Pipeline 41e96a86a5102ea204b912888b8ea71a https://www.encodeproject.org/files/ENCFF279UBV/@@download/ENCFF279UBV.bigBed hg19 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF071TPY bed narrowPeak peaks ENCSR334HSW ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF318-human ENCAB295BCT DNA False 2016-09-27 ENCODE 1 ENCFF160VXC, ENCFF720ZIN 6730526 ENCODE Processing Pipeline ed84f45cddfdff51c39de9b315cdc819 https://www.encodeproject.org/files/ENCFF071TPY/@@download/ENCFF071TPY.bed.gz hg19 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF854NST bed narrowPeak peaks ENCSR334HSW ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF318-human ENCAB295BCT DNA False 2016-09-27 ENCODE 1, 2 ENCFF160VXC, ENCFF720ZIN, ENCFF834TUP, ENCFF974JDO 7193210 ENCODE Processing Pipeline f3fb390effebfb531d644a18850a92db https://www.encodeproject.org/files/ENCFF854NST/@@download/ENCFF854NST.bed.gz hg19 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF737LSF bed narrowPeak conservative idr thresholded peaks ENCSR334HSW ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF318-human ENCAB295BCT DNA False 2016-09-27 ENCODE 1, 2 ENCFF001TDO, ENCFF071TPY, ENCFF688JRI, ENCFF854NST 14648 ENCODE Processing Pipeline 3f76160de1dba2a9f3ec67dfacbcd6fd https://www.encodeproject.org/files/ENCFF737LSF/@@download/ENCFF737LSF.bed.gz hg19 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF140NSX bigBed narrowPeak peaks ENCSR334HSW ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF318-human ENCAB295BCT DNA False 2016-09-27 ENCODE 2 ENCFF688JRI 10852571 ENCODE Processing Pipeline e9802cf16eb8ce2878ceaa369d9aa8a6 https://www.encodeproject.org/files/ENCFF140NSX/@@download/ENCFF140NSX.bigBed hg19 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF528PSL bigBed narrowPeak peaks ENCSR334HSW ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF318-human ENCAB295BCT DNA False 2016-09-27 ENCODE 1, 2 ENCFF854NST 12878496 ENCODE Processing Pipeline ceba9fe1035613c971bcd356d96b3c91 https://www.encodeproject.org/files/ENCFF528PSL/@@download/ENCFF528PSL.bigBed hg19 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF698MLW bed narrowPeak optimal idr thresholded peaks ENCSR334HSW ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF318-human ENCAB295BCT DNA False 2016-09-27 ENCODE 1, 2 ENCFF001TDO, ENCFF071TPY, ENCFF688JRI, ENCFF854NST 36732 ENCODE Processing Pipeline feaff44cd5137aa6ef07a5d4c399875b https://www.encodeproject.org/files/ENCFF698MLW/@@download/ENCFF698MLW.bed.gz hg19 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF030GAR bigBed narrowPeak conservative idr thresholded peaks ENCSR334HSW ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF318-human ENCAB295BCT DNA False 2016-09-27 ENCODE 1, 2 ENCFF737LSF 97518 ENCODE Processing Pipeline 497de0a054e470a52aa77982088418d9 https://www.encodeproject.org/files/ENCFF030GAR/@@download/ENCFF030GAR.bigBed hg19 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF603UZW bigBed narrowPeak optimal idr thresholded peaks ENCSR334HSW ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF318-human ENCAB295BCT DNA False 2016-09-27 ENCODE 1, 2 ENCFF698MLW 125918 ENCODE Processing Pipeline c62536e7f64be548248cee083d947124 https://www.encodeproject.org/files/ENCFF603UZW/@@download/ENCFF603UZW.bigBed hg19 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF353HNM bigWig signal p-value ENCSR334HSW ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF318-human ENCAB295BCT DNA False 2016-09-27 ENCODE 1 ENCFF304KSV 1075415569 ENCODE Processing Pipeline 9747e4078c99c25e4d09660a53e1b018 https://www.encodeproject.org/files/ENCFF353HNM/@@download/ENCFF353HNM.bigWig GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF803HAP bigWig signal p-value ENCSR334HSW ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF318-human ENCAB295BCT DNA False 2016-09-27 ENCODE 2 ENCFF373YTD 1481033034 ENCODE Processing Pipeline 94053235d51290239ccbeb0fb845fb93 https://www.encodeproject.org/files/ENCFF803HAP/@@download/ENCFF803HAP.bigWig GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF872WUI bigWig signal p-value ENCSR334HSW ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF318-human ENCAB295BCT DNA False 2016-09-27 ENCODE 1, 2 ENCFF304KSV, ENCFF373YTD 1885817533 ENCODE Processing Pipeline 5440af068e10fc805a79ae67947cf09d https://www.encodeproject.org/files/ENCFF872WUI/@@download/ENCFF872WUI.bigWig GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF642RGY bigWig fold change over control ENCSR334HSW ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF318-human ENCAB295BCT DNA False 2016-09-27 ENCODE 1 ENCFF304KSV 1338163038 ENCODE Processing Pipeline daa0df05182f0d0f122d8022d9ffe519 https://www.encodeproject.org/files/ENCFF642RGY/@@download/ENCFF642RGY.bigWig GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF554UVF bigWig fold change over control ENCSR334HSW ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF318-human ENCAB295BCT DNA False 2016-09-27 ENCODE 2 ENCFF373YTD 1455394740 ENCODE Processing Pipeline 05f7bc7029f8de96dd14c63225218fbf https://www.encodeproject.org/files/ENCFF554UVF/@@download/ENCFF554UVF.bigWig GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF672WCV bed narrowPeak peaks ENCSR334HSW ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF318-human ENCAB295BCT DNA False 2016-09-27 ENCODE 1, 2 ENCFF304KSV, ENCFF373YTD 7187681 ENCODE Processing Pipeline 856e501a78742acacf39db62fc23c2b3 https://www.encodeproject.org/files/ENCFF672WCV/@@download/ENCFF672WCV.bed.gz GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF402HHJ bed narrowPeak peaks ENCSR334HSW ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF318-human ENCAB295BCT DNA False 2016-09-27 ENCODE 1 ENCFF304KSV 6602763 ENCODE Processing Pipeline 4861b3eeda09c00652d15bfbc4418fc7 https://www.encodeproject.org/files/ENCFF402HHJ/@@download/ENCFF402HHJ.bed.gz GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF343TGD bed narrowPeak peaks ENCSR334HSW ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF318-human ENCAB295BCT DNA False 2016-09-27 ENCODE 2 ENCFF373YTD 6812592 ENCODE Processing Pipeline 7ba72f5ecc31190a4a34e20ed7a6cb6b https://www.encodeproject.org/files/ENCFF343TGD/@@download/ENCFF343TGD.bed.gz GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF081TVQ bigBed narrowPeak peaks ENCSR334HSW ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF318-human ENCAB295BCT DNA False 2016-09-27 ENCODE 1 ENCFF402HHJ 10804405 ENCODE Processing Pipeline 5c9648341fdbf92d442af3b4504d38e2 https://www.encodeproject.org/files/ENCFF081TVQ/@@download/ENCFF081TVQ.bigBed GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF702EPX bigBed narrowPeak peaks ENCSR334HSW ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF318-human ENCAB295BCT DNA False 2016-09-27 ENCODE 2 ENCFF343TGD 10863909 ENCODE Processing Pipeline afdd2a259c23c142db80b5307606b821 https://www.encodeproject.org/files/ENCFF702EPX/@@download/ENCFF702EPX.bigBed GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF903WLD bigBed narrowPeak peaks ENCSR334HSW ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF318-human ENCAB295BCT DNA False 2016-09-27 ENCODE 1, 2 ENCFF672WCV 12890421 ENCODE Processing Pipeline b29ad70d50cb29f1cf21a65d3fdbb4ba https://www.encodeproject.org/files/ENCFF903WLD/@@download/ENCFF903WLD.bigBed GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF082RIZ bed narrowPeak optimal idr thresholded peaks ENCSR334HSW ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF318-human ENCAB295BCT DNA False 2016-09-27 ENCODE 1, 2 ENCFF343TGD, ENCFF402HHJ, ENCFF419RSJ, ENCFF672WCV 35445 ENCODE Processing Pipeline 43264cb78152663aa4e31c68033a0126 https://www.encodeproject.org/files/ENCFF082RIZ/@@download/ENCFF082RIZ.bed.gz GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF438FCN bed narrowPeak conservative idr thresholded peaks ENCSR334HSW ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF318-human ENCAB295BCT DNA False 2016-09-27 ENCODE 1, 2 ENCFF343TGD, ENCFF402HHJ, ENCFF419RSJ, ENCFF672WCV 14449 ENCODE Processing Pipeline e3af8a54113109071b12162a28f7259d https://www.encodeproject.org/files/ENCFF438FCN/@@download/ENCFF438FCN.bed.gz GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF207HYL bigBed narrowPeak conservative idr thresholded peaks ENCSR334HSW ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF318-human ENCAB295BCT DNA False 2016-09-27 ENCODE 1, 2 ENCFF438FCN 98733 ENCODE Processing Pipeline 48eecb092604a251c83689125bd957ca https://www.encodeproject.org/files/ENCFF207HYL/@@download/ENCFF207HYL.bigBed GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF155WYX bigBed narrowPeak optimal idr thresholded peaks ENCSR334HSW ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF318-human ENCAB295BCT DNA False 2016-09-27 ENCODE 1, 2 ENCFF082RIZ 125076 ENCODE Processing Pipeline 66dd65e2c3e0504cea753064f7ccfbc9 https://www.encodeproject.org/files/ENCFF155WYX/@@download/ENCFF155WYX.bigBed GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF806RPA bigWig fold change over control ENCSR334HSW ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF318-human ENCAB295BCT DNA False 2016-09-27 ENCODE 1, 2 ENCFF304KSV, ENCFF373YTD 2374538329 ENCODE Processing Pipeline 1a68344959bac4e613ff706faa736fc7 https://www.encodeproject.org/files/ENCFF806RPA/@@download/ENCFF806RPA.bigWig GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF000CAP bam alignments ENCSR000AQH ChIP-seq EFO:0002067 K562 cell line Homo sapiens PHF8-human ENCAB000AJX, ENCAB757LUG DNA see document see document False 2012-03-06 ENCODE 1 1 1146121122 Bradley Bernstein, Broad c489d05e6d16934f6ebc91a29f7bd182 https://www.encodeproject.org/files/ENCFF000CAP/@@download/ENCFF000CAP.bam hg19 archived inconsistent platforms, mixed run types, mild to moderate bottlenecking, low read length, moderate library complexity mismatched status, missing derived_from, missing raw data in replicate insufficient replicate concordance ENCFF000CAQ bigBed broadPeak peaks ENCSR000AQH ChIP-seq EFO:0002067 K562 cell line Homo sapiens PHF8-human ENCAB000AJX, ENCAB757LUG DNA see document see document False 2012-03-06 ENCODE ENCFF001SZX 1835819 Bradley Bernstein, Broad 4eeeccc20d2d0464c2701a73f9a495c4 https://www.encodeproject.org/files/ENCFF000CAQ/@@download/ENCFF000CAQ.bigBed hg19 archived inconsistent platforms, mixed run types, mild to moderate bottlenecking, low read length, moderate library complexity missing raw data in replicate insufficient replicate concordance ENCFF000CAR bam alignments ENCSR000AQH ChIP-seq EFO:0002067 K562 cell line Homo sapiens PHF8-human ENCAB000AJX, ENCAB757LUG DNA see document see document False 2012-03-06 ENCODE 2 1 860223219 Bradley Bernstein, Broad c8ffae3ad040d6e35e614db06b4ada1d https://www.encodeproject.org/files/ENCFF000CAR/@@download/ENCFF000CAR.bam hg19 archived inconsistent platforms, mixed run types, mild to moderate bottlenecking, low read length, moderate library complexity missing derived_from, missing raw data in replicate insufficient replicate concordance ENCFF000CAT bigWig signal ENCSR000AQH ChIP-seq EFO:0002067 K562 cell line Homo sapiens PHF8-human ENCAB000AJX, ENCAB757LUG DNA see document see document False 2012-03-06 ENCODE 332421915 Bradley Bernstein, Broad 5a482b444a2028ebff3762b88403a03e https://www.encodeproject.org/files/ENCFF000CAT/@@download/ENCFF000CAT.bigWig hg19 archived inconsistent platforms, mixed run types, mild to moderate bottlenecking, low read length, moderate library complexity missing derived_from, missing raw data in replicate insufficient replicate concordance ENCFF000CBB fastq reads ENCSR000AQH ChIP-seq EFO:0002067 K562 cell line Homo sapiens PHF8-human ENCAB000AJX, ENCAB757LUG DNA see document see document False 2012-03-06 ENCODE 2 1 36 single-ended 1323006296 Bradley Bernstein, Broad 3580a915c4997dc3081b368472867fa9 https://www.encodeproject.org/files/ENCFF000CBB/@@download/ENCFF000CBB.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF283HQV/, /files/ENCFF994FIB/ released inconsistent platforms, mixed run types, mild to moderate bottlenecking, low read length, moderate library complexity missing raw data in replicate insufficient replicate concordance ENCFF001SZX bed broadPeak peaks ENCSR000AQH ChIP-seq EFO:0002067 K562 cell line Homo sapiens PHF8-human ENCAB000AJX, ENCAB757LUG DNA see document see document False 2012-03-06 ENCODE 912359 Bradley Bernstein, Broad ac17c190d3ee41737ebe9351f8e5f310 https://www.encodeproject.org/files/ENCFF001SZX/@@download/ENCFF001SZX.bed.gz hg19 archived inconsistent platforms, mixed run types, mild to moderate bottlenecking, low read length, moderate library complexity missing derived_from, missing raw data in replicate insufficient replicate concordance ENCFF002CER bed narrowPeak optimal idr thresholded peaks ENCSR000AQH ChIP-seq EFO:0002067 K562 cell line Homo sapiens PHF8-human ENCAB000AJX, ENCAB757LUG DNA see document see document False 2012-03-06 ENCODE 471008 ENCODE Consortium Analysis Working Group 72b25cc6efcdb2305f20e2fcdad29a58 https://www.encodeproject.org/files/ENCFF002CER/@@download/ENCFF002CER.bed.gz hg19 archived inconsistent platforms, mixed run types, mild to moderate bottlenecking, low read length, moderate library complexity missing derived_from, missing raw data in replicate insufficient replicate concordance ENCFF004YQN bigBed narrowPeak optimal idr thresholded peaks ENCSR000AQH ChIP-seq EFO:0002067 K562 cell line Homo sapiens PHF8-human ENCAB000AJX, ENCAB757LUG DNA see document see document False 2012-03-06 ENCODE ENCFF002CER 1300328 ENCODE Consortium 2357d2d2ef62941fedf2fa00a2e58eec https://www.encodeproject.org/files/ENCFF004YQN/@@download/ENCFF004YQN.bigBed hg19 archived inconsistent platforms, mixed run types, mild to moderate bottlenecking, low read length, moderate library complexity missing raw data in replicate insufficient replicate concordance ENCFF461XDG fastq reads ENCSR000AQH ChIP-seq EFO:0002067 K562 cell line Homo sapiens PHF8-human ENCAB000AJX, ENCAB757LUG DNA see document see document False 2012-03-06 ENCODE 2 1 36 single-ended 1131203010 Bradley Bernstein, Broad 157b13eee18bb99c9dd04a63937add67 https://www.encodeproject.org/files/ENCFF461XDG/@@download/ENCFF461XDG.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF283HQV/, /files/ENCFF994FIB/ released inconsistent platforms, mixed run types, mild to moderate bottlenecking, low read length, moderate library complexity missing raw data in replicate insufficient replicate concordance ENCFF931EAU fastq reads ENCSR000AQH ChIP-seq EFO:0002067 K562 cell line Homo sapiens PHF8-human ENCAB000AJX, ENCAB757LUG DNA see document see document False 2012-03-06 ENCODE 4 1 25 paired-ended 2 ENCFF205QLX 650624854 Bradley Bernstein, Broad a2abecf60fee18ee9e66713af69587f3 https://www.encodeproject.org/files/ENCFF931EAU/@@download/ENCFF931EAU.fastq.gz Illumina HiSeq 2500 archived inconsistent platforms, mixed run types, mild to moderate bottlenecking, low read length, moderate library complexity missing raw data in replicate insufficient replicate concordance, missing controlled_by ENCFF205QLX fastq reads ENCSR000AQH ChIP-seq EFO:0002067 K562 cell line Homo sapiens PHF8-human ENCAB000AJX, ENCAB757LUG DNA see document see document False 2012-03-06 ENCODE 4 1 36 paired-ended 1 ENCFF931EAU 819585056 Bradley Bernstein, Broad 0a94ab003020f87635a7ebf646d63e35 https://www.encodeproject.org/files/ENCFF205QLX/@@download/ENCFF205QLX.fastq.gz Illumina HiSeq 2500 archived inconsistent platforms, mixed run types, mild to moderate bottlenecking, low read length, moderate library complexity missing raw data in replicate insufficient replicate concordance, missing controlled_by ENCFF592RSM fastq reads ENCSR000AQH ChIP-seq EFO:0002067 K562 cell line Homo sapiens PHF8-human ENCAB000AJX, ENCAB757LUG DNA see document see document False 2012-03-06 ENCODE 3 1 25 paired-ended 2 ENCFF609HJW 935669136 Bradley Bernstein, Broad c2ea42abd20d4b68b4dff0621240fbab https://www.encodeproject.org/files/ENCFF592RSM/@@download/ENCFF592RSM.fastq.gz Illumina HiSeq 2500 archived inconsistent platforms, mixed run types, mild to moderate bottlenecking, low read length, moderate library complexity missing raw data in replicate insufficient replicate concordance, missing controlled_by ENCFF609HJW fastq reads ENCSR000AQH ChIP-seq EFO:0002067 K562 cell line Homo sapiens PHF8-human ENCAB000AJX, ENCAB757LUG DNA see document see document False 2012-03-06 ENCODE 3 1 36 paired-ended 1 ENCFF592RSM 1193111743 Bradley Bernstein, Broad 97b87943c05c8739639c2087347ad2db https://www.encodeproject.org/files/ENCFF609HJW/@@download/ENCFF609HJW.fastq.gz Illumina HiSeq 2500 /files/ENCFF156ECZ/, /files/ENCFF561WFK/ released inconsistent platforms, mixed run types, mild to moderate bottlenecking, low read length, moderate library complexity mismatched status, missing raw data in replicate insufficient replicate concordance ENCFF387ZPG bam unfiltered alignments ENCSR000AQH ChIP-seq EFO:0002067 K562 cell line Homo sapiens PHF8-human ENCAB000AJX, ENCAB757LUG DNA see document see document False 2012-03-06 ENCODE 2 36 ENCFF000CBB, ENCFF461XDG, ENCFF643CGH 3053827794 ENCODE Processing Pipeline 518d2ef2944a9cd1d9d297e10b567a4f https://www.encodeproject.org/files/ENCFF387ZPG/@@download/ENCFF387ZPG.bam GRCh38 released inconsistent platforms, mixed run types, mild to moderate bottlenecking, low read length, moderate library complexity missing raw data in replicate insufficient replicate concordance ENCFF509IQQ bam alignments ENCSR000AQH ChIP-seq EFO:0002067 K562 cell line Homo sapiens PHF8-human ENCAB000AJX, ENCAB757LUG DNA see document see document False 2012-03-06 ENCODE 2 36 ENCFF000CBB, ENCFF461XDG, ENCFF643CGH 1142085296 ENCODE Processing Pipeline 89c82da369cc74d9ef7377d82e03ca85 https://www.encodeproject.org/files/ENCFF509IQQ/@@download/ENCFF509IQQ.bam GRCh38 released inconsistent platforms, mixed run types, mild to moderate bottlenecking, low read length, moderate library complexity missing raw data in replicate insufficient replicate concordance ENCFF845EFA bam alignments ENCSR000AQH ChIP-seq EFO:0002067 K562 cell line Homo sapiens PHF8-human ENCAB000AJX, ENCAB757LUG DNA see document see document False 2012-03-06 ENCODE 2 36 ENCFF000CBB, ENCFF461XDG, ENCFF807MUK 1142886140 ENCODE Processing Pipeline bebaad9428d5b407470a74d4701b2282 https://www.encodeproject.org/files/ENCFF845EFA/@@download/ENCFF845EFA.bam hg19 released inconsistent platforms, mixed run types, mild to moderate bottlenecking, low read length, moderate library complexity missing raw data in replicate insufficient replicate concordance ENCFF228ATX bam unfiltered alignments ENCSR000AQH ChIP-seq EFO:0002067 K562 cell line Homo sapiens PHF8-human ENCAB000AJX, ENCAB757LUG DNA see document see document False 2012-03-06 ENCODE 2 36 ENCFF000CBB, ENCFF461XDG, ENCFF807MUK 3043577309 ENCODE Processing Pipeline 8b072bdefdaced88cb89abe4ac47dc37 https://www.encodeproject.org/files/ENCFF228ATX/@@download/ENCFF228ATX.bam hg19 released inconsistent platforms, mixed run types, mild to moderate bottlenecking, low read length, moderate library complexity missing raw data in replicate insufficient replicate concordance ENCFF666RSM bam unfiltered alignments ENCSR000AQH ChIP-seq EFO:0002067 K562 cell line Homo sapiens PHF8-human ENCAB000AJX, ENCAB757LUG DNA see document see document False 2012-03-06 ENCODE 3 36 ENCFF609HJW, ENCFF807MUK 1692762946 ENCODE Processing Pipeline 11d4d9e804f6d8bc72c384abcd0fa4db https://www.encodeproject.org/files/ENCFF666RSM/@@download/ENCFF666RSM.bam hg19 released inconsistent platforms, mixed run types, mild to moderate bottlenecking, low read length, moderate library complexity missing raw data in replicate insufficient replicate concordance ENCFF302WSZ bam alignments ENCSR000AQH ChIP-seq EFO:0002067 K562 cell line Homo sapiens PHF8-human ENCAB000AJX, ENCAB757LUG DNA see document see document False 2012-03-06 ENCODE 3 36 ENCFF609HJW, ENCFF643CGH 1108389224 ENCODE Processing Pipeline cde2e988048879f8c5b79d0e4611bd9c https://www.encodeproject.org/files/ENCFF302WSZ/@@download/ENCFF302WSZ.bam GRCh38 released inconsistent platforms, mixed run types, mild to moderate bottlenecking, low read length, moderate library complexity missing raw data in replicate insufficient replicate concordance ENCFF121RMK bam alignments ENCSR000AQH ChIP-seq EFO:0002067 K562 cell line Homo sapiens PHF8-human ENCAB000AJX, ENCAB757LUG DNA see document see document False 2012-03-06 ENCODE 3 36 ENCFF609HJW, ENCFF807MUK 1108864530 ENCODE Processing Pipeline a03b8419f659703157f27b73d3166d37 https://www.encodeproject.org/files/ENCFF121RMK/@@download/ENCFF121RMK.bam hg19 released inconsistent platforms, mixed run types, mild to moderate bottlenecking, low read length, moderate library complexity missing raw data in replicate insufficient replicate concordance ENCFF741XCT bam unfiltered alignments ENCSR000AQH ChIP-seq EFO:0002067 K562 cell line Homo sapiens PHF8-human ENCAB000AJX, ENCAB757LUG DNA see document see document False 2012-03-06 ENCODE 3 36 ENCFF609HJW, ENCFF643CGH 1703772115 ENCODE Processing Pipeline 0c57255733c8df0f8a2694d9a32a8d3b https://www.encodeproject.org/files/ENCFF741XCT/@@download/ENCFF741XCT.bam GRCh38 released inconsistent platforms, mixed run types, mild to moderate bottlenecking, low read length, moderate library complexity missing raw data in replicate insufficient replicate concordance ENCFF785NZH bigWig signal p-value ENCSR000AQH ChIP-seq EFO:0002067 K562 cell line Homo sapiens PHF8-human ENCAB000AJX, ENCAB757LUG DNA see document see document False 2012-03-06 ENCODE 3 ENCFF121RMK, ENCFF245PJA, ENCFF319GFP 587178615 ENCODE Processing Pipeline fcf74bf6a4c9bc3362a95fa2ea9b25ba https://www.encodeproject.org/files/ENCFF785NZH/@@download/ENCFF785NZH.bigWig hg19 released inconsistent platforms, mixed run types, mild to moderate bottlenecking, low read length, moderate library complexity missing raw data in replicate insufficient replicate concordance ENCFF400KUD bigWig fold change over control ENCSR000AQH ChIP-seq EFO:0002067 K562 cell line Homo sapiens PHF8-human ENCAB000AJX, ENCAB757LUG DNA see document see document False 2012-03-06 ENCODE 3 ENCFF121RMK, ENCFF245PJA, ENCFF319GFP 695546778 ENCODE Processing Pipeline a698db75b0bc79c41bc20ae128cc97fc https://www.encodeproject.org/files/ENCFF400KUD/@@download/ENCFF400KUD.bigWig hg19 released inconsistent platforms, mixed run types, mild to moderate bottlenecking, low read length, moderate library complexity missing raw data in replicate insufficient replicate concordance ENCFF100WXV bed narrowPeak conservative idr thresholded peaks ENCSR000AQH ChIP-seq EFO:0002067 K562 cell line Homo sapiens PHF8-human ENCAB000AJX, ENCAB757LUG DNA see document see document False 2012-03-06 ENCODE 2, 3 ENCFF001TDO, ENCFF192RQZ, ENCFF430CBL, ENCFF739TWP 257274 ENCODE Processing Pipeline ab28ccd801d27dbd54fb35b2382fc226 https://www.encodeproject.org/files/ENCFF100WXV/@@download/ENCFF100WXV.bed.gz hg19 released inconsistent platforms, mixed run types, mild to moderate bottlenecking, low read length, moderate library complexity missing raw data in replicate insufficient replicate concordance ENCFF626KTJ bed narrowPeak optimal idr thresholded peaks ENCSR000AQH ChIP-seq EFO:0002067 K562 cell line Homo sapiens PHF8-human ENCAB000AJX, ENCAB757LUG DNA see document see document False 2012-03-06 ENCODE 2, 3 ENCFF001TDO, ENCFF192RQZ, ENCFF430CBL, ENCFF739TWP 514874 ENCODE Processing Pipeline cd4e59b9e70e529ce4a9b478d544124a https://www.encodeproject.org/files/ENCFF626KTJ/@@download/ENCFF626KTJ.bed.gz hg19 released inconsistent platforms, mixed run types, mild to moderate bottlenecking, low read length, moderate library complexity missing raw data in replicate insufficient replicate concordance ENCFF427QTV bigWig fold change over control ENCSR000AQH ChIP-seq EFO:0002067 K562 cell line Homo sapiens PHF8-human ENCAB000AJX, ENCAB757LUG DNA see document see document False 2012-03-06 ENCODE 2, 3 ENCFF121RMK, ENCFF245PJA, ENCFF319GFP, ENCFF845EFA 985973695 ENCODE Processing Pipeline c9beab9a2e75cf534b0526669ec8a8ea https://www.encodeproject.org/files/ENCFF427QTV/@@download/ENCFF427QTV.bigWig hg19 released inconsistent platforms, mixed run types, mild to moderate bottlenecking, low read length, moderate library complexity missing raw data in replicate insufficient replicate concordance ENCFF739TWP bed narrowPeak peaks ENCSR000AQH ChIP-seq EFO:0002067 K562 cell line Homo sapiens PHF8-human ENCAB000AJX, ENCAB757LUG DNA see document see document False 2012-03-06 ENCODE 2 ENCFF245PJA, ENCFF319GFP, ENCFF845EFA 6501404 ENCODE Processing Pipeline 860d76c0cd5d8dcce10658f8a1dcfaa6 https://www.encodeproject.org/files/ENCFF739TWP/@@download/ENCFF739TWP.bed.gz hg19 released inconsistent platforms, mixed run types, mild to moderate bottlenecking, low read length, moderate library complexity missing raw data in replicate insufficient replicate concordance ENCFF192RQZ bed narrowPeak peaks ENCSR000AQH ChIP-seq EFO:0002067 K562 cell line Homo sapiens PHF8-human ENCAB000AJX, ENCAB757LUG DNA see document see document False 2012-03-06 ENCODE 2, 3 ENCFF121RMK, ENCFF245PJA, ENCFF319GFP, ENCFF845EFA 6995318 ENCODE Processing Pipeline 10501d436f31125cd55d5c35f81a0041 https://www.encodeproject.org/files/ENCFF192RQZ/@@download/ENCFF192RQZ.bed.gz hg19 released inconsistent platforms, mixed run types, mild to moderate bottlenecking, low read length, moderate library complexity missing raw data in replicate insufficient replicate concordance ENCFF444YMV bigBed narrowPeak peaks ENCSR000AQH ChIP-seq EFO:0002067 K562 cell line Homo sapiens PHF8-human ENCAB000AJX, ENCAB757LUG DNA see document see document False 2012-03-06 ENCODE 3 ENCFF430CBL 13409862 ENCODE Processing Pipeline 6733434571b06a879db6210eedd50193 https://www.encodeproject.org/files/ENCFF444YMV/@@download/ENCFF444YMV.bigBed hg19 released inconsistent platforms, mixed run types, mild to moderate bottlenecking, low read length, moderate library complexity missing raw data in replicate insufficient replicate concordance ENCFF430CBL bed narrowPeak peaks ENCSR000AQH ChIP-seq EFO:0002067 K562 cell line Homo sapiens PHF8-human ENCAB000AJX, ENCAB757LUG DNA see document see document False 2012-03-06 ENCODE 3 ENCFF121RMK, ENCFF245PJA, ENCFF319GFP 5748212 ENCODE Processing Pipeline ca3f630f6788e9fdfc49f5649995d014 https://www.encodeproject.org/files/ENCFF430CBL/@@download/ENCFF430CBL.bed.gz hg19 released inconsistent platforms, mixed run types, mild to moderate bottlenecking, low read length, moderate library complexity missing raw data in replicate insufficient replicate concordance ENCFF982OPG bigBed narrowPeak peaks ENCSR000AQH ChIP-seq EFO:0002067 K562 cell line Homo sapiens PHF8-human ENCAB000AJX, ENCAB757LUG DNA see document see document False 2012-03-06 ENCODE 2, 3 ENCFF192RQZ 13316021 ENCODE Processing Pipeline e35002cba172b14e471d75e413b6be79 https://www.encodeproject.org/files/ENCFF982OPG/@@download/ENCFF982OPG.bigBed hg19 released inconsistent platforms, mixed run types, mild to moderate bottlenecking, low read length, moderate library complexity missing raw data in replicate insufficient replicate concordance ENCFF241UPO bigBed narrowPeak optimal idr thresholded peaks ENCSR000AQH ChIP-seq EFO:0002067 K562 cell line Homo sapiens PHF8-human ENCAB000AJX, ENCAB757LUG DNA see document see document False 2012-03-06 ENCODE 2, 3 ENCFF626KTJ 1395595 ENCODE Processing Pipeline 3a38cde355c087a4b6c45a75a7fb5d0a https://www.encodeproject.org/files/ENCFF241UPO/@@download/ENCFF241UPO.bigBed hg19 released inconsistent platforms, mixed run types, mild to moderate bottlenecking, low read length, moderate library complexity missing raw data in replicate insufficient replicate concordance ENCFF756UVZ bigWig fold change over control ENCSR000AQH ChIP-seq EFO:0002067 K562 cell line Homo sapiens PHF8-human ENCAB000AJX, ENCAB757LUG DNA see document see document False 2012-03-06 ENCODE 2 ENCFF509IQQ, ENCFF829HZY, ENCFF893MMO 493552223 ENCODE Processing Pipeline 8790c6d57973ca40e82c4f9f28cba8e8 https://www.encodeproject.org/files/ENCFF756UVZ/@@download/ENCFF756UVZ.bigWig GRCh38 released inconsistent platforms, mixed run types, mild to moderate bottlenecking, low read length, moderate library complexity missing raw data in replicate insufficient replicate concordance ENCFF033ARN bigWig signal p-value ENCSR000AQH ChIP-seq EFO:0002067 K562 cell line Homo sapiens PHF8-human ENCAB000AJX, ENCAB757LUG DNA see document see document False 2012-03-06 ENCODE 2 ENCFF245PJA, ENCFF319GFP, ENCFF845EFA 671067308 ENCODE Processing Pipeline 5f55d2cbe0323bb767706591288f8c4c https://www.encodeproject.org/files/ENCFF033ARN/@@download/ENCFF033ARN.bigWig hg19 released inconsistent platforms, mixed run types, mild to moderate bottlenecking, low read length, moderate library complexity missing raw data in replicate insufficient replicate concordance ENCFF140HPP bigWig fold change over control ENCSR000AQH ChIP-seq EFO:0002067 K562 cell line Homo sapiens PHF8-human ENCAB000AJX, ENCAB757LUG DNA see document see document False 2012-03-06 ENCODE 2 ENCFF245PJA, ENCFF319GFP, ENCFF845EFA 494033454 ENCODE Processing Pipeline 3477dc0f58be7d049fbce235ea9206da https://www.encodeproject.org/files/ENCFF140HPP/@@download/ENCFF140HPP.bigWig hg19 released inconsistent platforms, mixed run types, mild to moderate bottlenecking, low read length, moderate library complexity missing raw data in replicate insufficient replicate concordance ENCFF594ZHW bigWig signal p-value ENCSR000AQH ChIP-seq EFO:0002067 K562 cell line Homo sapiens PHF8-human ENCAB000AJX, ENCAB757LUG DNA see document see document False 2012-03-06 ENCODE 2, 3 ENCFF121RMK, ENCFF245PJA, ENCFF319GFP, ENCFF845EFA 854943923 ENCODE Processing Pipeline 74db03f60b030af1053ac8581de574c4 https://www.encodeproject.org/files/ENCFF594ZHW/@@download/ENCFF594ZHW.bigWig hg19 released inconsistent platforms, mixed run types, mild to moderate bottlenecking, low read length, moderate library complexity missing raw data in replicate insufficient replicate concordance ENCFF541UBY bigBed narrowPeak peaks ENCSR000AQH ChIP-seq EFO:0002067 K562 cell line Homo sapiens PHF8-human ENCAB000AJX, ENCAB757LUG DNA see document see document False 2012-03-06 ENCODE 2 ENCFF739TWP 12945132 ENCODE Processing Pipeline 5c80bb67baf9c8557bb87365efb6afb4 https://www.encodeproject.org/files/ENCFF541UBY/@@download/ENCFF541UBY.bigBed hg19 released inconsistent platforms, mixed run types, mild to moderate bottlenecking, low read length, moderate library complexity missing raw data in replicate insufficient replicate concordance ENCFF860HRF bigBed narrowPeak conservative idr thresholded peaks ENCSR000AQH ChIP-seq EFO:0002067 K562 cell line Homo sapiens PHF8-human ENCAB000AJX, ENCAB757LUG DNA see document see document False 2012-03-06 ENCODE 2, 3 ENCFF100WXV 788111 ENCODE Processing Pipeline 8a1ba4a4e1873ac781fbb7e239c412d6 https://www.encodeproject.org/files/ENCFF860HRF/@@download/ENCFF860HRF.bigBed hg19 released inconsistent platforms, mixed run types, mild to moderate bottlenecking, low read length, moderate library complexity missing raw data in replicate insufficient replicate concordance ENCFF913SYY bigWig signal p-value ENCSR000AQH ChIP-seq EFO:0002067 K562 cell line Homo sapiens PHF8-human ENCAB000AJX, ENCAB757LUG DNA see document see document False 2012-03-06 ENCODE 2, 3 ENCFF302WSZ, ENCFF509IQQ, ENCFF829HZY, ENCFF893MMO 840498935 ENCODE Processing Pipeline 92373ce2ea2a40630163559312305948 https://www.encodeproject.org/files/ENCFF913SYY/@@download/ENCFF913SYY.bigWig GRCh38 released inconsistent platforms, mixed run types, mild to moderate bottlenecking, low read length, moderate library complexity missing raw data in replicate insufficient replicate concordance ENCFF973ABC bigBed narrowPeak peaks ENCSR000AQH ChIP-seq EFO:0002067 K562 cell line Homo sapiens PHF8-human ENCAB000AJX, ENCAB757LUG DNA see document see document False 2012-03-06 ENCODE 2 ENCFF460IWD 12957293 ENCODE Processing Pipeline d7988877accc5808e99016f670ed91aa https://www.encodeproject.org/files/ENCFF973ABC/@@download/ENCFF973ABC.bigBed GRCh38 released inconsistent platforms, mixed run types, mild to moderate bottlenecking, low read length, moderate library complexity missing raw data in replicate insufficient replicate concordance ENCFF619ZYB bigBed narrowPeak peaks ENCSR000AQH ChIP-seq EFO:0002067 K562 cell line Homo sapiens PHF8-human ENCAB000AJX, ENCAB757LUG DNA see document see document False 2012-03-06 ENCODE 3 ENCFF250MHG 13427982 ENCODE Processing Pipeline 57f9412b175412f7e1448d73fc5adeb6 https://www.encodeproject.org/files/ENCFF619ZYB/@@download/ENCFF619ZYB.bigBed GRCh38 released inconsistent platforms, mixed run types, mild to moderate bottlenecking, low read length, moderate library complexity missing raw data in replicate insufficient replicate concordance ENCFF754RGW bigBed narrowPeak peaks ENCSR000AQH ChIP-seq EFO:0002067 K562 cell line Homo sapiens PHF8-human ENCAB000AJX, ENCAB757LUG DNA see document see document False 2012-03-06 ENCODE 2, 3 ENCFF952YYL 13311868 ENCODE Processing Pipeline 6a5bacdabf2bb671fbf5bb36c9c36d53 https://www.encodeproject.org/files/ENCFF754RGW/@@download/ENCFF754RGW.bigBed GRCh38 released inconsistent platforms, mixed run types, mild to moderate bottlenecking, low read length, moderate library complexity missing raw data in replicate insufficient replicate concordance ENCFF581VHB bigBed narrowPeak conservative idr thresholded peaks ENCSR000AQH ChIP-seq EFO:0002067 K562 cell line Homo sapiens PHF8-human ENCAB000AJX, ENCAB757LUG DNA see document see document False 2012-03-06 ENCODE 2, 3 ENCFF225IZQ 796470 ENCODE Processing Pipeline 38ba9a1d4820d9278d4984be0b32fd56 https://www.encodeproject.org/files/ENCFF581VHB/@@download/ENCFF581VHB.bigBed GRCh38 released inconsistent platforms, mixed run types, mild to moderate bottlenecking, low read length, moderate library complexity missing raw data in replicate insufficient replicate concordance ENCFF124NVZ bigWig signal p-value ENCSR000AQH ChIP-seq EFO:0002067 K562 cell line Homo sapiens PHF8-human ENCAB000AJX, ENCAB757LUG DNA see document see document False 2012-03-06 ENCODE 2 ENCFF509IQQ, ENCFF829HZY, ENCFF893MMO 645066098 ENCODE Processing Pipeline bec98baff5c288728bb716d3a429af97 https://www.encodeproject.org/files/ENCFF124NVZ/@@download/ENCFF124NVZ.bigWig GRCh38 released inconsistent platforms, mixed run types, mild to moderate bottlenecking, low read length, moderate library complexity missing raw data in replicate insufficient replicate concordance ENCFF414RIR bigWig fold change over control ENCSR000AQH ChIP-seq EFO:0002067 K562 cell line Homo sapiens PHF8-human ENCAB000AJX, ENCAB757LUG DNA see document see document False 2012-03-06 ENCODE 2, 3 ENCFF302WSZ, ENCFF509IQQ, ENCFF829HZY, ENCFF893MMO 968783307 ENCODE Processing Pipeline 98823207772c5551175609fce83dc718 https://www.encodeproject.org/files/ENCFF414RIR/@@download/ENCFF414RIR.bigWig GRCh38 released inconsistent platforms, mixed run types, mild to moderate bottlenecking, low read length, moderate library complexity missing raw data in replicate insufficient replicate concordance ENCFF952YYL bed narrowPeak peaks ENCSR000AQH ChIP-seq EFO:0002067 K562 cell line Homo sapiens PHF8-human ENCAB000AJX, ENCAB757LUG DNA see document see document False 2012-03-06 ENCODE 2, 3 ENCFF302WSZ, ENCFF509IQQ, ENCFF829HZY, ENCFF893MMO 6985074 ENCODE Processing Pipeline 9ecea3e906c483200974c5509a175081 https://www.encodeproject.org/files/ENCFF952YYL/@@download/ENCFF952YYL.bed.gz GRCh38 released inconsistent platforms, mixed run types, mild to moderate bottlenecking, low read length, moderate library complexity missing raw data in replicate insufficient replicate concordance ENCFF952YDR bed narrowPeak optimal idr thresholded peaks ENCSR000AQH ChIP-seq EFO:0002067 K562 cell line Homo sapiens PHF8-human ENCAB000AJX, ENCAB757LUG DNA see document see document False 2012-03-06 ENCODE 2, 3 ENCFF250MHG, ENCFF419RSJ, ENCFF460IWD, ENCFF952YYL 507030 ENCODE Processing Pipeline 93137eae8a0a7e4817a43790e41b0849 https://www.encodeproject.org/files/ENCFF952YDR/@@download/ENCFF952YDR.bed.gz GRCh38 released inconsistent platforms, mixed run types, mild to moderate bottlenecking, low read length, moderate library complexity missing raw data in replicate insufficient replicate concordance ENCFF259PAD bigWig signal p-value ENCSR000AQH ChIP-seq EFO:0002067 K562 cell line Homo sapiens PHF8-human ENCAB000AJX, ENCAB757LUG DNA see document see document False 2012-03-06 ENCODE 3 ENCFF302WSZ, ENCFF829HZY, ENCFF893MMO 740758799 ENCODE Processing Pipeline d2f6273d0a0f598929d18214cfbf7e03 https://www.encodeproject.org/files/ENCFF259PAD/@@download/ENCFF259PAD.bigWig GRCh38 released inconsistent platforms, mixed run types, mild to moderate bottlenecking, low read length, moderate library complexity missing raw data in replicate insufficient replicate concordance ENCFF184LSS bigWig fold change over control ENCSR000AQH ChIP-seq EFO:0002067 K562 cell line Homo sapiens PHF8-human ENCAB000AJX, ENCAB757LUG DNA see document see document False 2012-03-06 ENCODE 3 ENCFF302WSZ, ENCFF829HZY, ENCFF893MMO 670869390 ENCODE Processing Pipeline 5fe8d6c7065a37d308cbbd79623b7765 https://www.encodeproject.org/files/ENCFF184LSS/@@download/ENCFF184LSS.bigWig GRCh38 released inconsistent platforms, mixed run types, mild to moderate bottlenecking, low read length, moderate library complexity missing raw data in replicate insufficient replicate concordance ENCFF250MHG bed narrowPeak peaks ENCSR000AQH ChIP-seq EFO:0002067 K562 cell line Homo sapiens PHF8-human ENCAB000AJX, ENCAB757LUG DNA see document see document False 2012-03-06 ENCODE 3 ENCFF302WSZ, ENCFF829HZY, ENCFF893MMO 5597610 ENCODE Processing Pipeline 58906dff9cc275b97776b0ff2fcf64e8 https://www.encodeproject.org/files/ENCFF250MHG/@@download/ENCFF250MHG.bed.gz GRCh38 released inconsistent platforms, mixed run types, mild to moderate bottlenecking, low read length, moderate library complexity missing raw data in replicate insufficient replicate concordance ENCFF225IZQ bed narrowPeak conservative idr thresholded peaks ENCSR000AQH ChIP-seq EFO:0002067 K562 cell line Homo sapiens PHF8-human ENCAB000AJX, ENCAB757LUG DNA see document see document False 2012-03-06 ENCODE 2, 3 ENCFF250MHG, ENCFF419RSJ, ENCFF460IWD, ENCFF952YYL 260477 ENCODE Processing Pipeline f006d8e7bbc432bde7a13efd4c5c8639 https://www.encodeproject.org/files/ENCFF225IZQ/@@download/ENCFF225IZQ.bed.gz GRCh38 released inconsistent platforms, mixed run types, mild to moderate bottlenecking, low read length, moderate library complexity missing raw data in replicate insufficient replicate concordance ENCFF708OCF bigBed narrowPeak optimal idr thresholded peaks ENCSR000AQH ChIP-seq EFO:0002067 K562 cell line Homo sapiens PHF8-human ENCAB000AJX, ENCAB757LUG DNA see document see document False 2012-03-06 ENCODE 2, 3 ENCFF952YDR 1381558 ENCODE Processing Pipeline 4712746794e20f8434c0102b922c883d https://www.encodeproject.org/files/ENCFF708OCF/@@download/ENCFF708OCF.bigBed GRCh38 released inconsistent platforms, mixed run types, mild to moderate bottlenecking, low read length, moderate library complexity missing raw data in replicate insufficient replicate concordance ENCFF460IWD bed narrowPeak peaks ENCSR000AQH ChIP-seq EFO:0002067 K562 cell line Homo sapiens PHF8-human ENCAB000AJX, ENCAB757LUG DNA see document see document False 2012-03-06 ENCODE 2 ENCFF509IQQ, ENCFF829HZY, ENCFF893MMO 6500610 ENCODE Processing Pipeline 92b2a0783bec6379ed050421e7f6fc4f https://www.encodeproject.org/files/ENCFF460IWD/@@download/ENCFF460IWD.bed.gz GRCh38 released inconsistent platforms, mixed run types, mild to moderate bottlenecking, low read length, moderate library complexity missing raw data in replicate insufficient replicate concordance ENCFF873EXA fastq reads ENCSR189TRZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens TCF12-human ENCAB521XDP DNA False 2016-07-08 ENCODE 2 1 100 paired-ended 2 ENCFF007HDS 2910093144 Michael Snyder, Stanford 230256efb9103d343104eadac88430ac SRA:SRR6212942 https://www.encodeproject.org/files/ENCFF873EXA/@@download/ENCFF873EXA.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFA/ released antibody characterized with exemption ENCFF007HDS fastq reads ENCSR189TRZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens TCF12-human ENCAB521XDP DNA False 2016-07-08 ENCODE 2 1 100 paired-ended 1 ENCFF873EXA 2848491547 Michael Snyder, Stanford 3f6fe9685d0e95fb05cf5ebdba48b681 SRA:SRR6212942 https://www.encodeproject.org/files/ENCFF007HDS/@@download/ENCFF007HDS.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFD/ released antibody characterized with exemption ENCFF043MCW fastq reads ENCSR189TRZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens TCF12-human ENCAB521XDP DNA False 2016-07-08 ENCODE 1 1 100 paired-ended 1 ENCFF520WVU 2357011286 Michael Snyder, Stanford b766d5693bd99650bede659a49e0a928 SRA:SRR6212943 https://www.encodeproject.org/files/ENCFF043MCW/@@download/ENCFF043MCW.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFF/ released antibody characterized with exemption ENCFF520WVU fastq reads ENCSR189TRZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens TCF12-human ENCAB521XDP DNA False 2016-07-08 ENCODE 1 1 100 paired-ended 2 ENCFF043MCW 2416462649 Michael Snyder, Stanford c63c73967f97415755fd89d34e137395 SRA:SRR6212943 https://www.encodeproject.org/files/ENCFF520WVU/@@download/ENCFF520WVU.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFH/ released antibody characterized with exemption ENCFF702MHE bam alignments ENCSR189TRZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens TCF12-human ENCAB521XDP DNA False 2016-07-08 ENCODE 1 100 ENCFF043MCW, ENCFF520WVU, ENCFF807MUK 4231217857 ENCODE Processing Pipeline 9d4b2abefc11c63a92eefa59b4c65ceb https://www.encodeproject.org/files/ENCFF702MHE/@@download/ENCFF702MHE.bam hg19 released antibody characterized with exemption ENCFF652SID bam alignments ENCSR189TRZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens TCF12-human ENCAB521XDP DNA False 2016-07-08 ENCODE 2 100 ENCFF007HDS, ENCFF807MUK, ENCFF873EXA 4867175121 ENCODE Processing Pipeline a77229da3814d471aef0810cd3a9213e https://www.encodeproject.org/files/ENCFF652SID/@@download/ENCFF652SID.bam hg19 released antibody characterized with exemption ENCFF362IGC bam unfiltered alignments ENCSR189TRZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens TCF12-human ENCAB521XDP DNA False 2016-07-08 ENCODE 1 100 ENCFF043MCW, ENCFF520WVU, ENCFF643CGH 5219303894 ENCODE Processing Pipeline 950d50743de1874cf840036232681000 https://www.encodeproject.org/files/ENCFF362IGC/@@download/ENCFF362IGC.bam GRCh38 released antibody characterized with exemption ENCFF283SLJ bam alignments ENCSR189TRZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens TCF12-human ENCAB521XDP DNA False 2016-07-08 ENCODE 1 100 ENCFF043MCW, ENCFF520WVU, ENCFF643CGH 4237264705 ENCODE Processing Pipeline 1c8c1f77c1637fef241c47349b381fb9 https://www.encodeproject.org/files/ENCFF283SLJ/@@download/ENCFF283SLJ.bam GRCh38 released antibody characterized with exemption ENCFF532BVM bam alignments ENCSR189TRZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens TCF12-human ENCAB521XDP DNA False 2016-07-08 ENCODE 2 100 ENCFF007HDS, ENCFF643CGH, ENCFF873EXA 4877994385 ENCODE Processing Pipeline efb8f102591f29526010a5e03796abfd https://www.encodeproject.org/files/ENCFF532BVM/@@download/ENCFF532BVM.bam GRCh38 released antibody characterized with exemption ENCFF413MNX bam unfiltered alignments ENCSR189TRZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens TCF12-human ENCAB521XDP DNA False 2016-07-08 ENCODE 2 100 ENCFF007HDS, ENCFF643CGH, ENCFF873EXA 6198099662 ENCODE Processing Pipeline 0400f85245c38394a8eb2775f7dda9c1 https://www.encodeproject.org/files/ENCFF413MNX/@@download/ENCFF413MNX.bam GRCh38 released antibody characterized with exemption ENCFF521UMF bigWig signal p-value ENCSR189TRZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens TCF12-human ENCAB521XDP DNA False 2016-07-08 ENCODE 2 ENCFF227IZS, ENCFF532BVM 971738504 ENCODE Processing Pipeline c3012f466aa698e5f6b8dc741f7afc66 https://www.encodeproject.org/files/ENCFF521UMF/@@download/ENCFF521UMF.bigWig GRCh38 released antibody characterized with exemption ENCFF131PYL bigWig signal p-value ENCSR189TRZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens TCF12-human ENCAB521XDP DNA False 2016-07-08 ENCODE 1 ENCFF283SLJ, ENCFF910IKB 1045783018 ENCODE Processing Pipeline cec5bd3d490e46fe97ecd371573ed7b3 https://www.encodeproject.org/files/ENCFF131PYL/@@download/ENCFF131PYL.bigWig GRCh38 released antibody characterized with exemption ENCFF911EPM bigWig signal p-value ENCSR189TRZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens TCF12-human ENCAB521XDP DNA False 2016-07-08 ENCODE 1, 2 ENCFF227IZS, ENCFF283SLJ, ENCFF532BVM, ENCFF910IKB 1981916536 ENCODE Processing Pipeline bbb3817c0ab4a6692f65e093e10ad805 https://www.encodeproject.org/files/ENCFF911EPM/@@download/ENCFF911EPM.bigWig GRCh38 released antibody characterized with exemption ENCFF679PYB bigWig fold change over control ENCSR189TRZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens TCF12-human ENCAB521XDP DNA False 2016-07-08 ENCODE 1 ENCFF283SLJ, ENCFF910IKB 1211374085 ENCODE Processing Pipeline 2ad08c815c1183fc681262032b6c8100 https://www.encodeproject.org/files/ENCFF679PYB/@@download/ENCFF679PYB.bigWig GRCh38 released antibody characterized with exemption ENCFF686DQR bigWig fold change over control ENCSR189TRZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens TCF12-human ENCAB521XDP DNA False 2016-07-08 ENCODE 2 ENCFF227IZS, ENCFF532BVM 1227456144 ENCODE Processing Pipeline 09a1cc036bec587c83ec0d4db7eafbb8 https://www.encodeproject.org/files/ENCFF686DQR/@@download/ENCFF686DQR.bigWig GRCh38 released antibody characterized with exemption ENCFF007RUV bigWig fold change over control ENCSR189TRZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens TCF12-human ENCAB521XDP DNA False 2016-07-08 ENCODE 1, 2 ENCFF227IZS, ENCFF283SLJ, ENCFF532BVM, ENCFF910IKB 2175659181 ENCODE Processing Pipeline f742585c8523d66477290ae4225ac6e7 https://www.encodeproject.org/files/ENCFF007RUV/@@download/ENCFF007RUV.bigWig GRCh38 released antibody characterized with exemption ENCFF044BDY bed narrowPeak peaks ENCSR189TRZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens TCF12-human ENCAB521XDP DNA False 2016-07-08 ENCODE 2 ENCFF227IZS, ENCFF532BVM 6471115 ENCODE Processing Pipeline 3caabdf7296c8f602cc28ed8af78873f https://www.encodeproject.org/files/ENCFF044BDY/@@download/ENCFF044BDY.bed.gz GRCh38 released antibody characterized with exemption ENCFF304BDR bed narrowPeak peaks ENCSR189TRZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens TCF12-human ENCAB521XDP DNA False 2016-07-08 ENCODE 1 ENCFF283SLJ, ENCFF910IKB 6607409 ENCODE Processing Pipeline 29a97c01d23a2cfd53c3cb12a42e343e https://www.encodeproject.org/files/ENCFF304BDR/@@download/ENCFF304BDR.bed.gz GRCh38 released antibody characterized with exemption ENCFF647ZZA bigBed narrowPeak peaks ENCSR189TRZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens TCF12-human ENCAB521XDP DNA False 2016-07-08 ENCODE 1 ENCFF304BDR 13391367 ENCODE Processing Pipeline 8c131cd7f0fe95d2baab426a44dbf86f https://www.encodeproject.org/files/ENCFF647ZZA/@@download/ENCFF647ZZA.bigBed GRCh38 released antibody characterized with exemption ENCFF011BON bigBed narrowPeak conservative idr thresholded peaks ENCSR189TRZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens TCF12-human ENCAB521XDP DNA False 2016-07-08 ENCODE 1, 2 ENCFF883AYB 430003 ENCODE Processing Pipeline 36ec053a90aa8affabdf2773d99851b6 https://www.encodeproject.org/files/ENCFF011BON/@@download/ENCFF011BON.bigBed GRCh38 released antibody characterized with exemption ENCFF952JIK bed narrowPeak optimal idr thresholded peaks ENCSR189TRZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens TCF12-human ENCAB521XDP DNA False 2016-07-08 ENCODE 1, 2 ENCFF044BDY, ENCFF223ZVT, ENCFF304BDR, ENCFF419RSJ 294522 ENCODE Processing Pipeline 52ed0332d740140a177782f40e0872bc https://www.encodeproject.org/files/ENCFF952JIK/@@download/ENCFF952JIK.bed.gz GRCh38 released antibody characterized with exemption ENCFF223ZVT bed narrowPeak peaks ENCSR189TRZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens TCF12-human ENCAB521XDP DNA False 2016-07-08 ENCODE 1, 2 ENCFF227IZS, ENCFF283SLJ, ENCFF532BVM, ENCFF910IKB 7193691 ENCODE Processing Pipeline 0f12f6f00f46c3eaa03f0faacb533b8f https://www.encodeproject.org/files/ENCFF223ZVT/@@download/ENCFF223ZVT.bed.gz GRCh38 released antibody characterized with exemption ENCFF892NQP bigBed narrowPeak peaks ENCSR189TRZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens TCF12-human ENCAB521XDP DNA False 2016-07-08 ENCODE 1, 2 ENCFF223ZVT 13382200 ENCODE Processing Pipeline 238d6e0c8cf7459cf1d81341e74cd365 https://www.encodeproject.org/files/ENCFF892NQP/@@download/ENCFF892NQP.bigBed GRCh38 released antibody characterized with exemption ENCFF883AYB bed narrowPeak conservative idr thresholded peaks ENCSR189TRZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens TCF12-human ENCAB521XDP DNA False 2016-07-08 ENCODE 1, 2 ENCFF044BDY, ENCFF223ZVT, ENCFF304BDR, ENCFF419RSJ 196231 ENCODE Processing Pipeline 2566c03c3201c8842a55f9491c3171de https://www.encodeproject.org/files/ENCFF883AYB/@@download/ENCFF883AYB.bed.gz GRCh38 released antibody characterized with exemption ENCFF504YLB bigBed narrowPeak peaks ENCSR189TRZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens TCF12-human ENCAB521XDP DNA False 2016-07-08 ENCODE 2 ENCFF044BDY 11279491 ENCODE Processing Pipeline 435bceca3a760aeffe98cb9914f1adc8 https://www.encodeproject.org/files/ENCFF504YLB/@@download/ENCFF504YLB.bigBed GRCh38 released antibody characterized with exemption ENCFF464YDZ bigBed narrowPeak optimal idr thresholded peaks ENCSR189TRZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens TCF12-human ENCAB521XDP DNA False 2016-07-08 ENCODE 1, 2 ENCFF952JIK 571991 ENCODE Processing Pipeline 8d564bb085db946b87f42c336fc163f0 https://www.encodeproject.org/files/ENCFF464YDZ/@@download/ENCFF464YDZ.bigBed GRCh38 released antibody characterized with exemption ENCFF337KXR bam unfiltered alignments ENCSR189TRZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens TCF12-human ENCAB521XDP DNA False 2016-07-08 ENCODE 1 100 ENCFF043MCW, ENCFF520WVU, ENCFF807MUK 5213491715 ENCODE Processing Pipeline fac28a64b4019707c015b70c91073e4a https://www.encodeproject.org/files/ENCFF337KXR/@@download/ENCFF337KXR.bam hg19 released antibody characterized with exemption ENCFF073LVN bam unfiltered alignments ENCSR189TRZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens TCF12-human ENCAB521XDP DNA False 2016-07-08 ENCODE 2 100 ENCFF007HDS, ENCFF807MUK, ENCFF873EXA 6191036573 ENCODE Processing Pipeline d99782c24fae52f6aa5ca0d371ae81b1 https://www.encodeproject.org/files/ENCFF073LVN/@@download/ENCFF073LVN.bam hg19 released antibody characterized with exemption ENCFF802RYP bigWig signal p-value ENCSR189TRZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens TCF12-human ENCAB521XDP DNA False 2016-07-08 ENCODE 1, 2 ENCFF051LWI, ENCFF581ZJL, ENCFF652SID, ENCFF702MHE 1854628757 ENCODE Processing Pipeline 89c0f294d4be0d5905faa83cae898169 https://www.encodeproject.org/files/ENCFF802RYP/@@download/ENCFF802RYP.bigWig hg19 released antibody characterized with exemption ENCFF173GQY bigWig signal p-value ENCSR189TRZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens TCF12-human ENCAB521XDP DNA False 2016-07-08 ENCODE 1 ENCFF581ZJL, ENCFF702MHE 1219778707 ENCODE Processing Pipeline 2b0fa36401d82fa6e14480f64c8c54dd https://www.encodeproject.org/files/ENCFF173GQY/@@download/ENCFF173GQY.bigWig hg19 released antibody characterized with exemption ENCFF258GEA bigWig fold change over control ENCSR189TRZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens TCF12-human ENCAB521XDP DNA False 2016-07-08 ENCODE 1 ENCFF581ZJL, ENCFF702MHE 1209097245 ENCODE Processing Pipeline 74f3f9b949a88ae0816e4e4aaccb2604 https://www.encodeproject.org/files/ENCFF258GEA/@@download/ENCFF258GEA.bigWig hg19 released antibody characterized with exemption ENCFF627NVL bed narrowPeak peaks ENCSR189TRZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens TCF12-human ENCAB521XDP DNA False 2016-07-08 ENCODE 2 ENCFF051LWI, ENCFF652SID 6612322 ENCODE Processing Pipeline c94f36c4657842187a9a2e757738c0f2 https://www.encodeproject.org/files/ENCFF627NVL/@@download/ENCFF627NVL.bed.gz hg19 released antibody characterized with exemption ENCFF031PSQ bigBed narrowPeak peaks ENCSR189TRZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens TCF12-human ENCAB521XDP DNA False 2016-07-08 ENCODE 1 ENCFF436EEZ 13392280 ENCODE Processing Pipeline b9be4e78b902fadaefbf76abb47d9130 https://www.encodeproject.org/files/ENCFF031PSQ/@@download/ENCFF031PSQ.bigBed hg19 released antibody characterized with exemption ENCFF242IWJ bed narrowPeak optimal idr thresholded peaks ENCSR189TRZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens TCF12-human ENCAB521XDP DNA False 2016-07-08 ENCODE 1, 2 ENCFF001TDO, ENCFF436EEZ, ENCFF627NVL, ENCFF777QKF 294099 ENCODE Processing Pipeline a3a1e5f8f633db2836973205f624314e https://www.encodeproject.org/files/ENCFF242IWJ/@@download/ENCFF242IWJ.bed.gz hg19 released antibody characterized with exemption ENCFF436EEZ bed narrowPeak peaks ENCSR189TRZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens TCF12-human ENCAB521XDP DNA False 2016-07-08 ENCODE 1 ENCFF581ZJL, ENCFF702MHE 6757441 ENCODE Processing Pipeline 43e8a65d9d33f9e5bf8e0dfaccc72e29 https://www.encodeproject.org/files/ENCFF436EEZ/@@download/ENCFF436EEZ.bed.gz hg19 released antibody characterized with exemption ENCFF351LLM bigWig fold change over control ENCSR189TRZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens TCF12-human ENCAB521XDP DNA False 2016-07-08 ENCODE 2 ENCFF051LWI, ENCFF652SID 1221639317 ENCODE Processing Pipeline 3bef9eeaf0a712ea5332b58ccc79505b https://www.encodeproject.org/files/ENCFF351LLM/@@download/ENCFF351LLM.bigWig hg19 released antibody characterized with exemption ENCFF518HBT bigWig fold change over control ENCSR189TRZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens TCF12-human ENCAB521XDP DNA False 2016-07-08 ENCODE 1, 2 ENCFF051LWI, ENCFF581ZJL, ENCFF652SID, ENCFF702MHE 2138107240 ENCODE Processing Pipeline be4eb8c7fafe587d82bea9717ba0efcf https://www.encodeproject.org/files/ENCFF518HBT/@@download/ENCFF518HBT.bigWig hg19 released antibody characterized with exemption ENCFF777QKF bed narrowPeak peaks ENCSR189TRZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens TCF12-human ENCAB521XDP DNA False 2016-07-08 ENCODE 1, 2 ENCFF051LWI, ENCFF581ZJL, ENCFF652SID, ENCFF702MHE 7214303 ENCODE Processing Pipeline 38df1b0cb28d70f686b34b3b8802e292 https://www.encodeproject.org/files/ENCFF777QKF/@@download/ENCFF777QKF.bed.gz hg19 released antibody characterized with exemption ENCFF346MQD bigBed narrowPeak peaks ENCSR189TRZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens TCF12-human ENCAB521XDP DNA False 2016-07-08 ENCODE 2 ENCFF627NVL 11269933 ENCODE Processing Pipeline dc3b32c815d878f7f7a1491bd0e00117 https://www.encodeproject.org/files/ENCFF346MQD/@@download/ENCFF346MQD.bigBed hg19 released antibody characterized with exemption ENCFF096WIO bigBed narrowPeak conservative idr thresholded peaks ENCSR189TRZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens TCF12-human ENCAB521XDP DNA False 2016-07-08 ENCODE 1, 2 ENCFF766PSK 429833 ENCODE Processing Pipeline 55d5e305509939510cd6bc999463c953 https://www.encodeproject.org/files/ENCFF096WIO/@@download/ENCFF096WIO.bigBed hg19 released antibody characterized with exemption ENCFF912KFC bigWig signal p-value ENCSR189TRZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens TCF12-human ENCAB521XDP DNA False 2016-07-08 ENCODE 2 ENCFF051LWI, ENCFF652SID 1244350354 ENCODE Processing Pipeline ca37db6af8e14271ce492b0350abb928 https://www.encodeproject.org/files/ENCFF912KFC/@@download/ENCFF912KFC.bigWig hg19 released antibody characterized with exemption ENCFF438ZLU bigBed narrowPeak peaks ENCSR189TRZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens TCF12-human ENCAB521XDP DNA False 2016-07-08 ENCODE 1, 2 ENCFF777QKF 13378389 ENCODE Processing Pipeline 6dbc5a487a5ae7f384594053d4ba5bca https://www.encodeproject.org/files/ENCFF438ZLU/@@download/ENCFF438ZLU.bigBed hg19 released antibody characterized with exemption ENCFF766PSK bed narrowPeak conservative idr thresholded peaks ENCSR189TRZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens TCF12-human ENCAB521XDP DNA False 2016-07-08 ENCODE 1, 2 ENCFF001TDO, ENCFF436EEZ, ENCFF627NVL, ENCFF777QKF 198181 ENCODE Processing Pipeline 40eeca92928cbaa227f538cca2e80ea9 https://www.encodeproject.org/files/ENCFF766PSK/@@download/ENCFF766PSK.bed.gz hg19 released antibody characterized with exemption ENCFF502KMQ bigBed narrowPeak optimal idr thresholded peaks ENCSR189TRZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens TCF12-human ENCAB521XDP DNA False 2016-07-08 ENCODE 1, 2 ENCFF242IWJ 567810 ENCODE Processing Pipeline 5831d615cabc338ea89ac8a456f374db https://www.encodeproject.org/files/ENCFF502KMQ/@@download/ENCFF502KMQ.bigBed hg19 released antibody characterized with exemption ENCFF000CBZ bam alignments ENCSR000AUB ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIRT6-human ENCAB000AKT DNA see document see document False 2012-08-06 ENCODE 1 ENCFF000CCK 859826555 Bradley Bernstein, Broad aab74df1dad5c409090523081cccf75e https://www.encodeproject.org/files/ENCFF000CBZ/@@download/ENCFF000CBZ.bam hg19 archived control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length ENCFF000CCA bigBed broadPeak peaks ENCSR000AUB ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIRT6-human ENCAB000AKT DNA see document see document False 2012-08-06 ENCODE ENCFF001TAE 666639 Bradley Bernstein, Broad b82566e837ed4eb71c01ea790ab50e81 https://www.encodeproject.org/files/ENCFF000CCA/@@download/ENCFF000CCA.bigBed hg19 archived control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length ENCFF000CCC bigWig signal ENCSR000AUB ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIRT6-human ENCAB000AKT DNA see document see document False 2012-08-06 ENCODE 233190006 Bradley Bernstein, Broad f1cd48a54c6a76115eb412d590da1b51 https://www.encodeproject.org/files/ENCFF000CCC/@@download/ENCFF000CCC.bigWig hg19 archived control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length missing derived_from ENCFF000CCK fastq reads ENCSR000AUB ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIRT6-human ENCAB000AKT DNA see document see document False 2012-08-06 ENCODE 1 1 36 single-ended 1123981474 Bradley Bernstein, Broad 5ffd208d0bf5f74166b854393b99d09f https://www.encodeproject.org/files/ENCFF000CCK/@@download/ENCFF000CCK.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000BWK/ released control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length ENCFF001TAE bed broadPeak peaks ENCSR000AUB ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIRT6-human ENCAB000AKT DNA see document see document False 2012-08-06 ENCODE 365700 Bradley Bernstein, Broad be0ef94bb51b4846a20b963ae52f7ed6 https://www.encodeproject.org/files/ENCFF001TAE/@@download/ENCFF001TAE.bed.gz hg19 archived control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length missing derived_from ENCFF650RQR bam alignments ENCSR000AUB ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIRT6-human ENCAB000AKT DNA see document see document False 2012-08-06 ENCODE 1 36 ENCFF000CCK, ENCFF807MUK 454945489 ENCODE Processing Pipeline d26ec999644a1b46254e36c7e1eac6d3 https://www.encodeproject.org/files/ENCFF650RQR/@@download/ENCFF650RQR.bam hg19 released control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length ENCFF714MHA bam unfiltered alignments ENCSR000AUB ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIRT6-human ENCAB000AKT DNA see document see document False 2012-08-06 ENCODE 1 36 ENCFF000CCK, ENCFF807MUK 1396564653 ENCODE Processing Pipeline 78a5af603d16add9db579e5bb9a30965 https://www.encodeproject.org/files/ENCFF714MHA/@@download/ENCFF714MHA.bam hg19 released control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length ENCFF817FTZ bam alignments ENCSR000AUB ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIRT6-human ENCAB000AKT DNA see document see document False 2012-08-06 ENCODE 1 36 ENCFF000CCK, ENCFF643CGH 454550648 ENCODE Processing Pipeline cb93e9422f9ce20af0b1fcce6d04f9a8 https://www.encodeproject.org/files/ENCFF817FTZ/@@download/ENCFF817FTZ.bam GRCh38 released control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length ENCFF163KLJ bam unfiltered alignments ENCSR000AUB ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIRT6-human ENCAB000AKT DNA see document see document False 2012-08-06 ENCODE 1 36 ENCFF000CCK, ENCFF643CGH 1403282393 ENCODE Processing Pipeline 24559551e52370aac36e7415f0255b1b https://www.encodeproject.org/files/ENCFF163KLJ/@@download/ENCFF163KLJ.bam GRCh38 released control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length ENCFF667ZBS bed narrowPeak peaks ENCSR000AUB ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIRT6-human ENCAB000AKT DNA see document see document False 2012-08-06 ENCODE 1 ENCFF574XYY, ENCFF650RQR 4013435 ENCODE Processing Pipeline de80fc1248efcb8b0603f4c7ab04ce2f https://www.encodeproject.org/files/ENCFF667ZBS/@@download/ENCFF667ZBS.bed.gz hg19 released control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length ENCFF297NTZ bigWig signal p-value ENCSR000AUB ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIRT6-human ENCAB000AKT DNA see document see document False 2012-08-06 ENCODE 1 ENCFF574XYY, ENCFF650RQR 344686792 ENCODE Processing Pipeline 31f45fa6051cdd15ffeb8f4bf9566346 https://www.encodeproject.org/files/ENCFF297NTZ/@@download/ENCFF297NTZ.bigWig hg19 released control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length ENCFF563TWG bigWig fold change over control ENCSR000AUB ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIRT6-human ENCAB000AKT DNA see document see document False 2012-08-06 ENCODE 1 ENCFF392XRJ, ENCFF817FTZ 213927200 ENCODE Processing Pipeline 31309f0134ea1a152cdf58f4d1a4fbe4 https://www.encodeproject.org/files/ENCFF563TWG/@@download/ENCFF563TWG.bigWig GRCh38 released control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length ENCFF430LQG bigWig fold change over control ENCSR000AUB ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIRT6-human ENCAB000AKT DNA see document see document False 2012-08-06 ENCODE 1 ENCFF574XYY, ENCFF650RQR 217018538 ENCODE Processing Pipeline ffdf5caf40369b3d1da58e63f5037ff6 https://www.encodeproject.org/files/ENCFF430LQG/@@download/ENCFF430LQG.bigWig hg19 released control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length ENCFF355NGR bigBed narrowPeak peaks ENCSR000AUB ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIRT6-human ENCAB000AKT DNA see document see document False 2012-08-06 ENCODE 1 ENCFF667ZBS 9945744 ENCODE Processing Pipeline a804cb32c396c54284d1e296aeb7ff10 https://www.encodeproject.org/files/ENCFF355NGR/@@download/ENCFF355NGR.bigBed hg19 released control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length ENCFF671JEN bed narrowPeak pseudoreplicated idr thresholded peaks ENCSR000AUB ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIRT6-human ENCAB000AKT DNA see document see document False 2012-08-06 ENCODE 1 ENCFF001TDO, ENCFF667ZBS 12882 ENCODE Processing Pipeline 1e1fa62cc678c778a5189ea5504b9c9e https://www.encodeproject.org/files/ENCFF671JEN/@@download/ENCFF671JEN.bed.gz hg19 released control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length ENCFF584VGN bigBed narrowPeak pseudoreplicated idr thresholded peaks ENCSR000AUB ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIRT6-human ENCAB000AKT DNA see document see document False 2012-08-06 ENCODE 1 ENCFF671JEN 101840 ENCODE Processing Pipeline 962f586038754e4fd6414616ef9e7d04 https://www.encodeproject.org/files/ENCFF584VGN/@@download/ENCFF584VGN.bigBed hg19 released control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length ENCFF202WRI bigWig signal p-value ENCSR000AUB ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIRT6-human ENCAB000AKT DNA see document see document False 2012-08-06 ENCODE 1 ENCFF392XRJ, ENCFF817FTZ 312301203 ENCODE Processing Pipeline a6908decf41d07cd8135b6187860884c https://www.encodeproject.org/files/ENCFF202WRI/@@download/ENCFF202WRI.bigWig GRCh38 released control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length ENCFF954TIN bed narrowPeak peaks ENCSR000AUB ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIRT6-human ENCAB000AKT DNA see document see document False 2012-08-06 ENCODE 1 ENCFF392XRJ, ENCFF817FTZ 3973538 ENCODE Processing Pipeline b9333bee00335986ba9f8cd1af718159 https://www.encodeproject.org/files/ENCFF954TIN/@@download/ENCFF954TIN.bed.gz GRCh38 released control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length ENCFF827UWM bigBed narrowPeak peaks ENCSR000AUB ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIRT6-human ENCAB000AKT DNA see document see document False 2012-08-06 ENCODE 1 ENCFF954TIN 9916493 ENCODE Processing Pipeline 2c96e20a1f9b8349186c1d20d66fab78 https://www.encodeproject.org/files/ENCFF827UWM/@@download/ENCFF827UWM.bigBed GRCh38 released control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length ENCFF747XDN bed narrowPeak pseudoreplicated idr thresholded peaks ENCSR000AUB ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIRT6-human ENCAB000AKT DNA see document see document False 2012-08-06 ENCODE 1 ENCFF419RSJ, ENCFF954TIN 10741 ENCODE Processing Pipeline 622eb271ee34e8a4a61bb2a5d85e7e61 https://www.encodeproject.org/files/ENCFF747XDN/@@download/ENCFF747XDN.bed.gz GRCh38 released control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length ENCFF945NOR bigBed narrowPeak pseudoreplicated idr thresholded peaks ENCSR000AUB ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIRT6-human ENCAB000AKT DNA see document see document False 2012-08-06 ENCODE 1 ENCFF747XDN 97204 ENCODE Processing Pipeline a212c6a3eb41be198a3e8270828d3f8e https://www.encodeproject.org/files/ENCFF945NOR/@@download/ENCFF945NOR.bigBed GRCh38 released control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length ENCFF086EMX bam unfiltered alignments ENCSR508DQA ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOXK2-human ENCAB625ERS DNA False 2016-04-22 ENCODE 2 100 ENCFF164JCA, ENCFF344DMA, ENCFF807MUK 3810245359 ENCODE Processing Pipeline 9170df017cf9f3918b021aa086bd1617 https://www.encodeproject.org/files/ENCFF086EMX/@@download/ENCFF086EMX.bam hg19 released low read depth, mild to moderate bottlenecking ENCFF681LIU bam unfiltered alignments ENCSR508DQA ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOXK2-human ENCAB625ERS DNA False 2016-04-22 ENCODE 1 100 ENCFF260CTF, ENCFF807MUK, ENCFF959CFI 4270921722 ENCODE Processing Pipeline 34c8ef81c09d4790502c1d57762f7cd0 https://www.encodeproject.org/files/ENCFF681LIU/@@download/ENCFF681LIU.bam hg19 released low read depth, mild to moderate bottlenecking ENCFF959CFI fastq reads ENCSR508DQA ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOXK2-human ENCAB625ERS DNA False 2016-04-22 ENCODE 1 1 100 paired-ended 2 ENCFF260CTF 1970922229 Michael Snyder, Stanford ca86d98fa40984b617cd3f3ccfb94b69 SRA:SRR5111695 https://www.encodeproject.org/files/ENCFF959CFI/@@download/ENCFF959CFI.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFH/ released low read depth, mild to moderate bottlenecking ENCFF260CTF fastq reads ENCSR508DQA ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOXK2-human ENCAB625ERS DNA False 2016-04-22 ENCODE 1 1 100 paired-ended 1 ENCFF959CFI 1990292131 Michael Snyder, Stanford 6dc54782342e78c9c06f55c0885e307c SRA:SRR5111695 https://www.encodeproject.org/files/ENCFF260CTF/@@download/ENCFF260CTF.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFF/ released low read depth, mild to moderate bottlenecking ENCFF344DMA fastq reads ENCSR508DQA ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOXK2-human ENCAB625ERS DNA False 2016-04-22 ENCODE 2 1 100 paired-ended 1 ENCFF164JCA 1682223921 Michael Snyder, Stanford d5ad9ccc1f263d24f4b164d602fbe7a6 SRA:SRR5111696 https://www.encodeproject.org/files/ENCFF344DMA/@@download/ENCFF344DMA.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFD/ released low read depth, mild to moderate bottlenecking ENCFF164JCA fastq reads ENCSR508DQA ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOXK2-human ENCAB625ERS DNA False 2016-04-22 ENCODE 2 1 100 paired-ended 2 ENCFF344DMA 1755299366 Michael Snyder, Stanford 4d9478fcf4d4fd696f1c116d364f98b7 SRA:SRR5111696 https://www.encodeproject.org/files/ENCFF164JCA/@@download/ENCFF164JCA.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFA/ released low read depth, mild to moderate bottlenecking ENCFF599UMI bam alignments ENCSR508DQA ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOXK2-human ENCAB625ERS DNA False 2016-04-22 ENCODE 1 100 ENCFF260CTF, ENCFF807MUK, ENCFF959CFI 3328064038 ENCODE Processing Pipeline dd163be14c67ac70ccb4b736f4185bd5 https://www.encodeproject.org/files/ENCFF599UMI/@@download/ENCFF599UMI.bam hg19 released low read depth, mild to moderate bottlenecking ENCFF928REO bam alignments ENCSR508DQA ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOXK2-human ENCAB625ERS DNA False 2016-04-22 ENCODE 2 100 ENCFF164JCA, ENCFF344DMA, ENCFF807MUK 3267135358 ENCODE Processing Pipeline ef18442585702fcf79cdf5c60033b16e https://www.encodeproject.org/files/ENCFF928REO/@@download/ENCFF928REO.bam hg19 released low read depth, mild to moderate bottlenecking ENCFF367JTQ bigWig signal p-value ENCSR508DQA ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOXK2-human ENCAB625ERS DNA False 2016-04-22 ENCODE 1 ENCFF581ZJL, ENCFF599UMI 1124953742 ENCODE Processing Pipeline 7f846f9386d5079f6f658fdc94ac10a4 https://www.encodeproject.org/files/ENCFF367JTQ/@@download/ENCFF367JTQ.bigWig hg19 released low read depth, mild to moderate bottlenecking ENCFF242SUG bigWig signal p-value ENCSR508DQA ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOXK2-human ENCAB625ERS DNA False 2016-04-22 ENCODE 2 ENCFF051LWI, ENCFF928REO 987429842 ENCODE Processing Pipeline af834dd4bcf09ba01103a69abfe53667 https://www.encodeproject.org/files/ENCFF242SUG/@@download/ENCFF242SUG.bigWig hg19 released low read depth, mild to moderate bottlenecking ENCFF120FED bigWig signal p-value ENCSR508DQA ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOXK2-human ENCAB625ERS DNA False 2016-04-22 ENCODE 1, 2 ENCFF051LWI, ENCFF581ZJL, ENCFF599UMI, ENCFF928REO 1565241542 ENCODE Processing Pipeline 873526977153ef3a793852ff6b657fc5 https://www.encodeproject.org/files/ENCFF120FED/@@download/ENCFF120FED.bigWig hg19 released low read depth, mild to moderate bottlenecking ENCFF582QDN bigWig fold change over control ENCSR508DQA ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOXK2-human ENCAB625ERS DNA False 2016-04-22 ENCODE 1 ENCFF581ZJL, ENCFF599UMI 993805942 ENCODE Processing Pipeline 3c3330e9f6509a54bbe90ae1fc57ca3c https://www.encodeproject.org/files/ENCFF582QDN/@@download/ENCFF582QDN.bigWig hg19 released low read depth, mild to moderate bottlenecking ENCFF357DIT bigWig fold change over control ENCSR508DQA ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOXK2-human ENCAB625ERS DNA False 2016-04-22 ENCODE 2 ENCFF051LWI, ENCFF928REO 987156703 ENCODE Processing Pipeline 5f791f06209affa65f143d0572045b92 https://www.encodeproject.org/files/ENCFF357DIT/@@download/ENCFF357DIT.bigWig hg19 released low read depth, mild to moderate bottlenecking ENCFF688YSP bigWig fold change over control ENCSR508DQA ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOXK2-human ENCAB625ERS DNA False 2016-04-22 ENCODE 1, 2 ENCFF051LWI, ENCFF581ZJL, ENCFF599UMI, ENCFF928REO 1892643464 ENCODE Processing Pipeline 5589d26fcfe2a17d700896b5f1769b99 https://www.encodeproject.org/files/ENCFF688YSP/@@download/ENCFF688YSP.bigWig hg19 released low read depth, mild to moderate bottlenecking ENCFF188GHO bed narrowPeak peaks ENCSR508DQA ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOXK2-human ENCAB625ERS DNA False 2016-04-22 ENCODE 2 ENCFF051LWI, ENCFF928REO 6860119 ENCODE Processing Pipeline fd59c3000d29184e8110f9bdc7c6ecc8 https://www.encodeproject.org/files/ENCFF188GHO/@@download/ENCFF188GHO.bed.gz hg19 released low read depth, mild to moderate bottlenecking ENCFF451DBC bed narrowPeak peaks ENCSR508DQA ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOXK2-human ENCAB625ERS DNA False 2016-04-22 ENCODE 1, 2 ENCFF051LWI, ENCFF581ZJL, ENCFF599UMI, ENCFF928REO 7143490 ENCODE Processing Pipeline 4e4e927c22ff9106926871ad25ca7a9f https://www.encodeproject.org/files/ENCFF451DBC/@@download/ENCFF451DBC.bed.gz hg19 released low read depth, mild to moderate bottlenecking ENCFF632VHL bigBed narrowPeak peaks ENCSR508DQA ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOXK2-human ENCAB625ERS DNA False 2016-04-22 ENCODE 1 ENCFF158PJI 11391405 ENCODE Processing Pipeline 9e7f41d74cc46fc2fd42eb60b73db6d2 https://www.encodeproject.org/files/ENCFF632VHL/@@download/ENCFF632VHL.bigBed hg19 released low read depth, mild to moderate bottlenecking ENCFF951AAA bigBed narrowPeak peaks ENCSR508DQA ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOXK2-human ENCAB625ERS DNA False 2016-04-22 ENCODE 2 ENCFF188GHO 13220404 ENCODE Processing Pipeline 81da02c7c2f51f4a27bbb408333d9cf4 https://www.encodeproject.org/files/ENCFF951AAA/@@download/ENCFF951AAA.bigBed hg19 released low read depth, mild to moderate bottlenecking ENCFF158PJI bed narrowPeak peaks ENCSR508DQA ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOXK2-human ENCAB625ERS DNA False 2016-04-22 ENCODE 1 ENCFF581ZJL, ENCFF599UMI 6292302 ENCODE Processing Pipeline 5817bd2bc47a0d98ce9dbc84ff763fe4 https://www.encodeproject.org/files/ENCFF158PJI/@@download/ENCFF158PJI.bed.gz hg19 released low read depth, mild to moderate bottlenecking ENCFF511KTE bigBed narrowPeak peaks ENCSR508DQA ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOXK2-human ENCAB625ERS DNA False 2016-04-22 ENCODE 1, 2 ENCFF451DBC 13088863 ENCODE Processing Pipeline 3b4e0d9602f2b1a43b6835f224469139 https://www.encodeproject.org/files/ENCFF511KTE/@@download/ENCFF511KTE.bigBed hg19 released low read depth, mild to moderate bottlenecking ENCFF156DFG bam unfiltered alignments ENCSR508DQA ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOXK2-human ENCAB625ERS DNA False 2016-04-22 ENCODE 2 100 ENCFF164JCA, ENCFF344DMA, ENCFF643CGH 3814068462 ENCODE Processing Pipeline ef5a1855a95581e1290ae9e2c4de734e https://www.encodeproject.org/files/ENCFF156DFG/@@download/ENCFF156DFG.bam GRCh38 released low read depth, mild to moderate bottlenecking ENCFF718ARO bam unfiltered alignments ENCSR508DQA ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOXK2-human ENCAB625ERS DNA False 2016-04-22 ENCODE 1 100 ENCFF260CTF, ENCFF643CGH, ENCFF959CFI 4273991045 ENCODE Processing Pipeline b72d5e9899c5e578fe1907bb24126b3b https://www.encodeproject.org/files/ENCFF718ARO/@@download/ENCFF718ARO.bam GRCh38 released low read depth, mild to moderate bottlenecking ENCFF563FZR bam alignments ENCSR508DQA ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOXK2-human ENCAB625ERS DNA False 2016-04-22 ENCODE 2 100 ENCFF164JCA, ENCFF344DMA, ENCFF643CGH 3269628811 ENCODE Processing Pipeline 1acefed48b146bee9666e763cd9f8d7b https://www.encodeproject.org/files/ENCFF563FZR/@@download/ENCFF563FZR.bam GRCh38 released low read depth, mild to moderate bottlenecking ENCFF373AFZ bam alignments ENCSR508DQA ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOXK2-human ENCAB625ERS DNA False 2016-04-22 ENCODE 1 100 ENCFF260CTF, ENCFF643CGH, ENCFF959CFI 3329641808 ENCODE Processing Pipeline a363eb22f07745c63d028b3d1c792ae6 https://www.encodeproject.org/files/ENCFF373AFZ/@@download/ENCFF373AFZ.bam GRCh38 released low read depth, mild to moderate bottlenecking ENCFF460PUQ bigWig signal p-value ENCSR508DQA ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOXK2-human ENCAB625ERS DNA False 2016-04-22 ENCODE 1 ENCFF373AFZ, ENCFF910IKB 1108992264 ENCODE Processing Pipeline 67ad6a388ac88a06dee184646757f483 https://www.encodeproject.org/files/ENCFF460PUQ/@@download/ENCFF460PUQ.bigWig GRCh38 released low read depth, mild to moderate bottlenecking ENCFF506HWT bigWig signal p-value ENCSR508DQA ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOXK2-human ENCAB625ERS DNA False 2016-04-22 ENCODE 2 ENCFF227IZS, ENCFF563FZR 976242607 ENCODE Processing Pipeline 428d0a4633fcec1d395f076eba79dd16 https://www.encodeproject.org/files/ENCFF506HWT/@@download/ENCFF506HWT.bigWig GRCh38 released low read depth, mild to moderate bottlenecking ENCFF883WBQ bigWig signal p-value ENCSR508DQA ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOXK2-human ENCAB625ERS DNA False 2016-04-22 ENCODE 1, 2 ENCFF227IZS, ENCFF373AFZ, ENCFF563FZR, ENCFF910IKB 1755126266 ENCODE Processing Pipeline b07e0772f1a762aa9aa786b96d4ecfa7 https://www.encodeproject.org/files/ENCFF883WBQ/@@download/ENCFF883WBQ.bigWig GRCh38 released low read depth, mild to moderate bottlenecking ENCFF431AVN bigWig fold change over control ENCSR508DQA ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOXK2-human ENCAB625ERS DNA False 2016-04-22 ENCODE 1 ENCFF373AFZ, ENCFF910IKB 991389093 ENCODE Processing Pipeline d5d1e9de34b6579eebf8cd87c6d2b622 https://www.encodeproject.org/files/ENCFF431AVN/@@download/ENCFF431AVN.bigWig GRCh38 released low read depth, mild to moderate bottlenecking ENCFF783FOE bigWig fold change over control ENCSR508DQA ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOXK2-human ENCAB625ERS DNA False 2016-04-22 ENCODE 2 ENCFF227IZS, ENCFF563FZR 994230530 ENCODE Processing Pipeline 9218732a3703fdb5fe7362808844b756 https://www.encodeproject.org/files/ENCFF783FOE/@@download/ENCFF783FOE.bigWig GRCh38 released low read depth, mild to moderate bottlenecking ENCFF523BNY bigWig fold change over control ENCSR508DQA ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOXK2-human ENCAB625ERS DNA False 2016-04-22 ENCODE 1, 2 ENCFF227IZS, ENCFF373AFZ, ENCFF563FZR, ENCFF910IKB 1894665941 ENCODE Processing Pipeline 9d69ef9c744b3670dd2e407fd57139c0 https://www.encodeproject.org/files/ENCFF523BNY/@@download/ENCFF523BNY.bigWig GRCh38 released low read depth, mild to moderate bottlenecking ENCFF327NEA bed narrowPeak peaks ENCSR508DQA ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOXK2-human ENCAB625ERS DNA False 2016-04-22 ENCODE 1 ENCFF373AFZ, ENCFF910IKB 6150060 ENCODE Processing Pipeline 7fe57bd5d92128f13b9d59975aae8ad2 https://www.encodeproject.org/files/ENCFF327NEA/@@download/ENCFF327NEA.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking ENCFF640PWR bigBed narrowPeak peaks ENCSR508DQA ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOXK2-human ENCAB625ERS DNA False 2016-04-22 ENCODE 1 ENCFF327NEA 11395114 ENCODE Processing Pipeline 4cd0340625876176b4af97b56c5483b7 https://www.encodeproject.org/files/ENCFF640PWR/@@download/ENCFF640PWR.bigBed GRCh38 released low read depth, mild to moderate bottlenecking ENCFF060MAZ bed narrowPeak peaks ENCSR508DQA ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOXK2-human ENCAB625ERS DNA False 2016-04-22 ENCODE 2 ENCFF227IZS, ENCFF563FZR 6723612 ENCODE Processing Pipeline 1279efdb9aaa9db46c04750a0a805be1 https://www.encodeproject.org/files/ENCFF060MAZ/@@download/ENCFF060MAZ.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking ENCFF793PES bigBed narrowPeak conservative idr thresholded peaks ENCSR508DQA ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOXK2-human ENCAB625ERS DNA False 2016-04-22 ENCODE 1, 2 ENCFF606WYG 767430 ENCODE Processing Pipeline c8fb2a814f9c403629764d01e22e5f84 https://www.encodeproject.org/files/ENCFF793PES/@@download/ENCFF793PES.bigBed GRCh38 released low read depth, mild to moderate bottlenecking ENCFF738BXO bed narrowPeak peaks ENCSR508DQA ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOXK2-human ENCAB625ERS DNA False 2016-04-22 ENCODE 1, 2 ENCFF227IZS, ENCFF373AFZ, ENCFF563FZR, ENCFF910IKB 7155862 ENCODE Processing Pipeline 14df7082ddd06acdb544ec1b9b0c008a https://www.encodeproject.org/files/ENCFF738BXO/@@download/ENCFF738BXO.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking ENCFF816WLZ bigBed narrowPeak peaks ENCSR508DQA ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOXK2-human ENCAB625ERS DNA False 2016-04-22 ENCODE 2 ENCFF060MAZ 13178662 ENCODE Processing Pipeline e7e249bc656855d84ef77b77d3eced5a https://www.encodeproject.org/files/ENCFF816WLZ/@@download/ENCFF816WLZ.bigBed GRCh38 released low read depth, mild to moderate bottlenecking ENCFF981COV bigBed narrowPeak peaks ENCSR508DQA ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOXK2-human ENCAB625ERS DNA False 2016-04-22 ENCODE 1, 2 ENCFF738BXO 13135619 ENCODE Processing Pipeline 0a6067995ef239473ede180255fd9a02 https://www.encodeproject.org/files/ENCFF981COV/@@download/ENCFF981COV.bigBed GRCh38 released low read depth, mild to moderate bottlenecking ENCFF606WYG bed narrowPeak conservative idr thresholded peaks ENCSR508DQA ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOXK2-human ENCAB625ERS DNA False 2016-04-22 ENCODE 1, 2 ENCFF060MAZ, ENCFF327NEA, ENCFF419RSJ, ENCFF738BXO 352017 ENCODE Processing Pipeline c6cbfb388bba0fa6bb93bfb303a38b28 https://www.encodeproject.org/files/ENCFF606WYG/@@download/ENCFF606WYG.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking ENCFF490EQR bed narrowPeak optimal idr thresholded peaks ENCSR508DQA ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOXK2-human ENCAB625ERS DNA False 2016-04-22 ENCODE 1, 2 ENCFF060MAZ, ENCFF327NEA, ENCFF419RSJ, ENCFF738BXO 413118 ENCODE Processing Pipeline 8e7d965948f669a017bdd7bc2b7685dd https://www.encodeproject.org/files/ENCFF490EQR/@@download/ENCFF490EQR.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking ENCFF807MGO bigBed narrowPeak optimal idr thresholded peaks ENCSR508DQA ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOXK2-human ENCAB625ERS DNA False 2016-04-22 ENCODE 1, 2 ENCFF490EQR 867316 ENCODE Processing Pipeline 9540df3e6dd1c36fa360a1fa4a0ec107 https://www.encodeproject.org/files/ENCFF807MGO/@@download/ENCFF807MGO.bigBed GRCh38 released low read depth, mild to moderate bottlenecking ENCFF492GXZ bed narrowPeak optimal idr thresholded peaks ENCSR508DQA ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOXK2-human ENCAB625ERS DNA False 2016-04-22 ENCODE 1, 2 ENCFF001TDO, ENCFF158PJI, ENCFF188GHO, ENCFF451DBC 368132 ENCODE Processing Pipeline 78f64e4354c002e60b1ba43e77ebe73c https://www.encodeproject.org/files/ENCFF492GXZ/@@download/ENCFF492GXZ.bed.gz hg19 released low read depth, mild to moderate bottlenecking ENCFF078OFT bigBed narrowPeak optimal idr thresholded peaks ENCSR508DQA ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOXK2-human ENCAB625ERS DNA False 2016-04-22 ENCODE 1, 2 ENCFF492GXZ 634752 ENCODE Processing Pipeline 14f1ec579c429f5c435b1e53cbd40e24 https://www.encodeproject.org/files/ENCFF078OFT/@@download/ENCFF078OFT.bigBed hg19 released low read depth, mild to moderate bottlenecking ENCFF960WIT bed narrowPeak conservative idr thresholded peaks ENCSR508DQA ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOXK2-human ENCAB625ERS DNA False 2016-04-22 ENCODE 1, 2 ENCFF001TDO, ENCFF158PJI, ENCFF188GHO, ENCFF451DBC 311177 ENCODE Processing Pipeline 097a863b523b10d3ecf4bbba3e058663 https://www.encodeproject.org/files/ENCFF960WIT/@@download/ENCFF960WIT.bed.gz hg19 released low read depth, mild to moderate bottlenecking ENCFF624QOU bigBed narrowPeak conservative idr thresholded peaks ENCSR508DQA ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOXK2-human ENCAB625ERS DNA False 2016-04-22 ENCODE 1, 2 ENCFF960WIT 563252 ENCODE Processing Pipeline f067d02bd0d1d32939bbbf45a8630644 https://www.encodeproject.org/files/ENCFF624QOU/@@download/ENCFF624QOU.bigBed hg19 released low read depth, mild to moderate bottlenecking ENCFF566VEY bam unfiltered alignments ENCSR990AZC ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM3-human ENCAB353TGR DNA False 2016-09-27 ENCODE 2 100 ENCFF501RUA, ENCFF721WRK, ENCFF807MUK 7542511696 ENCODE Processing Pipeline 2040dbfac7dd33ae7b1d7fe8d188dc21 https://www.encodeproject.org/files/ENCFF566VEY/@@download/ENCFF566VEY.bam hg19 released ENCFF598LRF bam unfiltered alignments ENCSR990AZC ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM3-human ENCAB353TGR DNA False 2016-09-27 ENCODE 1 100 ENCFF567PIT, ENCFF568RGZ, ENCFF807MUK 6552589560 ENCODE Processing Pipeline 8e5bc988bd56d1dd969fa975a5d4b2ff https://www.encodeproject.org/files/ENCFF598LRF/@@download/ENCFF598LRF.bam hg19 released ENCFF568RGZ fastq reads ENCSR990AZC ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM3-human ENCAB353TGR DNA False 2016-09-27 ENCODE 1 1 100 paired-ended 1 ENCFF567PIT 3009794003 Michael Snyder, Stanford 66be1c461800ec1ada0b48971b6aabd4 SRA:SRR5112354 https://www.encodeproject.org/files/ENCFF568RGZ/@@download/ENCFF568RGZ.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFF/ released ENCFF721WRK fastq reads ENCSR990AZC ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM3-human ENCAB353TGR DNA False 2016-09-27 ENCODE 2 1 100 paired-ended 1 ENCFF501RUA 3489761444 Michael Snyder, Stanford e5cc83638f0ac44287c70c6240be75a8 SRA:SRR5112355 https://www.encodeproject.org/files/ENCFF721WRK/@@download/ENCFF721WRK.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFD/ released ENCFF501RUA fastq reads ENCSR990AZC ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM3-human ENCAB353TGR DNA False 2016-09-27 ENCODE 2 1 100 paired-ended 2 ENCFF721WRK 3547511726 Michael Snyder, Stanford 41e72f6f9dc89eb3c322659b52910415 SRA:SRR5112355 https://www.encodeproject.org/files/ENCFF501RUA/@@download/ENCFF501RUA.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFA/ released ENCFF567PIT fastq reads ENCSR990AZC ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM3-human ENCAB353TGR DNA False 2016-09-27 ENCODE 1 1 100 paired-ended 2 ENCFF568RGZ 3048737428 Michael Snyder, Stanford 629b95e354965588673062c4fdb01a9e SRA:SRR5112354 https://www.encodeproject.org/files/ENCFF567PIT/@@download/ENCFF567PIT.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFH/ released ENCFF621JTB bam alignments ENCSR990AZC ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM3-human ENCAB353TGR DNA False 2016-09-27 ENCODE 2 100 ENCFF501RUA, ENCFF721WRK, ENCFF807MUK 6514679259 ENCODE Processing Pipeline bb47ad417d035d554b9ba1c5e7fb003d https://www.encodeproject.org/files/ENCFF621JTB/@@download/ENCFF621JTB.bam hg19 released ENCFF508SEX bam alignments ENCSR990AZC ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM3-human ENCAB353TGR DNA False 2016-09-27 ENCODE 1 100 ENCFF567PIT, ENCFF568RGZ, ENCFF807MUK 5634227522 ENCODE Processing Pipeline 3ac416fe01d0765726196b55a99a457c https://www.encodeproject.org/files/ENCFF508SEX/@@download/ENCFF508SEX.bam hg19 released ENCFF602HHC bigWig signal p-value ENCSR990AZC ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM3-human ENCAB353TGR DNA False 2016-09-27 ENCODE 1 ENCFF508SEX, ENCFF581ZJL 1377277478 ENCODE Processing Pipeline ace0eb498d5b3ccf7b140fe95596846b https://www.encodeproject.org/files/ENCFF602HHC/@@download/ENCFF602HHC.bigWig hg19 released ENCFF573VHS bigWig signal p-value ENCSR990AZC ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM3-human ENCAB353TGR DNA False 2016-09-27 ENCODE 2 ENCFF051LWI, ENCFF581ZJL, ENCFF621JTB 1928165008 ENCODE Processing Pipeline 5a7a14f6a665e35734b73fc43e31d2de https://www.encodeproject.org/files/ENCFF573VHS/@@download/ENCFF573VHS.bigWig hg19 released ENCFF050OCX bigWig signal p-value ENCSR990AZC ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM3-human ENCAB353TGR DNA False 2016-09-27 ENCODE 1, 2 ENCFF051LWI, ENCFF508SEX, ENCFF581ZJL, ENCFF621JTB 1966070385 ENCODE Processing Pipeline ba15c86bb9316a6b09a395b5cea2af34 https://www.encodeproject.org/files/ENCFF050OCX/@@download/ENCFF050OCX.bigWig hg19 released ENCFF608TZE bigWig fold change over control ENCSR990AZC ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM3-human ENCAB353TGR DNA False 2016-09-27 ENCODE 1 ENCFF508SEX, ENCFF581ZJL 1345395851 ENCODE Processing Pipeline c75a5d5f4ba33fe80a9f5460caa94913 https://www.encodeproject.org/files/ENCFF608TZE/@@download/ENCFF608TZE.bigWig hg19 released ENCFF776KNN bigWig fold change over control ENCSR990AZC ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM3-human ENCAB353TGR DNA False 2016-09-27 ENCODE 2 ENCFF051LWI, ENCFF581ZJL, ENCFF621JTB 1893112148 ENCODE Processing Pipeline c43166a171731d5311f7991ade482f08 https://www.encodeproject.org/files/ENCFF776KNN/@@download/ENCFF776KNN.bigWig hg19 released ENCFF332WPW bigWig fold change over control ENCSR990AZC ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM3-human ENCAB353TGR DNA False 2016-09-27 ENCODE 1, 2 ENCFF051LWI, ENCFF508SEX, ENCFF581ZJL, ENCFF621JTB 2432054798 ENCODE Processing Pipeline 27e0d67bec6d4ac913388cae5e6a4be6 https://www.encodeproject.org/files/ENCFF332WPW/@@download/ENCFF332WPW.bigWig hg19 released ENCFF208YXN bigBed narrowPeak peaks ENCSR990AZC ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM3-human ENCAB353TGR DNA False 2016-09-27 ENCODE 1 ENCFF260MCD 11023087 ENCODE Processing Pipeline 1e1c55ea642b34da53c9a62d2576ad65 https://www.encodeproject.org/files/ENCFF208YXN/@@download/ENCFF208YXN.bigBed hg19 released ENCFF260MCD bed narrowPeak peaks ENCSR990AZC ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM3-human ENCAB353TGR DNA False 2016-09-27 ENCODE 1 ENCFF508SEX, ENCFF581ZJL 6644738 ENCODE Processing Pipeline 38fc5094fedb938a0cd694b3d2ffd88e https://www.encodeproject.org/files/ENCFF260MCD/@@download/ENCFF260MCD.bed.gz hg19 released ENCFF262RPX bed narrowPeak peaks ENCSR990AZC ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM3-human ENCAB353TGR DNA False 2016-09-27 ENCODE 2 ENCFF051LWI, ENCFF581ZJL, ENCFF621JTB 7072773 ENCODE Processing Pipeline ed8b89f25a858edca351d442df02f59a https://www.encodeproject.org/files/ENCFF262RPX/@@download/ENCFF262RPX.bed.gz hg19 released ENCFF530ETK bed narrowPeak peaks ENCSR990AZC ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM3-human ENCAB353TGR DNA False 2016-09-27 ENCODE 1, 2 ENCFF051LWI, ENCFF508SEX, ENCFF581ZJL, ENCFF621JTB 7233376 ENCODE Processing Pipeline 200d67b2045a04d5547c856cde94ac0b https://www.encodeproject.org/files/ENCFF530ETK/@@download/ENCFF530ETK.bed.gz hg19 released ENCFF824BFL bigBed narrowPeak peaks ENCSR990AZC ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM3-human ENCAB353TGR DNA False 2016-09-27 ENCODE 2 ENCFF262RPX 10943590 ENCODE Processing Pipeline 5be690b67e1b66eb461f79d74a5c3a02 https://www.encodeproject.org/files/ENCFF824BFL/@@download/ENCFF824BFL.bigBed hg19 released ENCFF967ENR bigBed narrowPeak peaks ENCSR990AZC ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM3-human ENCAB353TGR DNA False 2016-09-27 ENCODE 1, 2 ENCFF530ETK 13042427 ENCODE Processing Pipeline 505313246c05d1ae2293745f2985b199 https://www.encodeproject.org/files/ENCFF967ENR/@@download/ENCFF967ENR.bigBed hg19 released ENCFF605QGJ bed narrowPeak conservative idr thresholded peaks ENCSR990AZC ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM3-human ENCAB353TGR DNA False 2016-09-27 ENCODE 1, 2 ENCFF001TDO, ENCFF260MCD, ENCFF262RPX, ENCFF530ETK 33226 ENCODE Processing Pipeline 442aefc6145383ced59d427b142cd044 https://www.encodeproject.org/files/ENCFF605QGJ/@@download/ENCFF605QGJ.bed.gz hg19 released ENCFF394PVD bigBed narrowPeak conservative idr thresholded peaks ENCSR990AZC ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM3-human ENCAB353TGR DNA False 2016-09-27 ENCODE 1, 2 ENCFF605QGJ 121008 ENCODE Processing Pipeline 55e1bf97cf4fc02e50bb02ce081d3da0 https://www.encodeproject.org/files/ENCFF394PVD/@@download/ENCFF394PVD.bigBed hg19 released ENCFF895DKT bigBed narrowPeak optimal idr thresholded peaks ENCSR990AZC ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM3-human ENCAB353TGR DNA False 2016-09-27 ENCODE 1, 2 ENCFF679ITJ 156649 ENCODE Processing Pipeline 4cce95777ac263136867f761824cf4d6 https://www.encodeproject.org/files/ENCFF895DKT/@@download/ENCFF895DKT.bigBed hg19 released ENCFF679ITJ bed narrowPeak optimal idr thresholded peaks ENCSR990AZC ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM3-human ENCAB353TGR DNA False 2016-09-27 ENCODE 1, 2 ENCFF001TDO, ENCFF260MCD, ENCFF262RPX, ENCFF530ETK 53864 ENCODE Processing Pipeline 4809a1434ba955b7c1164f4b9f572b67 https://www.encodeproject.org/files/ENCFF679ITJ/@@download/ENCFF679ITJ.bed.gz hg19 released ENCFF642KOW bam unfiltered alignments ENCSR990AZC ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM3-human ENCAB353TGR DNA False 2016-09-27 ENCODE 1 100 ENCFF567PIT, ENCFF568RGZ, ENCFF643CGH 6561797504 ENCODE Processing Pipeline d6676688b07740b05238deb0b95ce80f https://www.encodeproject.org/files/ENCFF642KOW/@@download/ENCFF642KOW.bam GRCh38 released ENCFF961BZW bam unfiltered alignments ENCSR990AZC ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM3-human ENCAB353TGR DNA False 2016-09-27 ENCODE 2 100 ENCFF501RUA, ENCFF643CGH, ENCFF721WRK 7552849077 ENCODE Processing Pipeline cd50aa8aa23a322f879af9e5f8da8df3 https://www.encodeproject.org/files/ENCFF961BZW/@@download/ENCFF961BZW.bam GRCh38 released ENCFF668FCG bam alignments ENCSR990AZC ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM3-human ENCAB353TGR DNA False 2016-09-27 ENCODE 1 100 ENCFF567PIT, ENCFF568RGZ, ENCFF643CGH 5638457482 ENCODE Processing Pipeline 21f9edceb8e77e091293ec350ba32a02 https://www.encodeproject.org/files/ENCFF668FCG/@@download/ENCFF668FCG.bam GRCh38 released ENCFF145NON bam alignments ENCSR990AZC ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM3-human ENCAB353TGR DNA False 2016-09-27 ENCODE 2 100 ENCFF501RUA, ENCFF643CGH, ENCFF721WRK 6519958105 ENCODE Processing Pipeline a7ca88f7c13cf4edde97dbf91ca22e69 https://www.encodeproject.org/files/ENCFF145NON/@@download/ENCFF145NON.bam GRCh38 released ENCFF631UKM bigWig signal p-value ENCSR990AZC ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM3-human ENCAB353TGR DNA False 2016-09-27 ENCODE 1 ENCFF668FCG, ENCFF910IKB 1293935796 ENCODE Processing Pipeline 7b2a034b4d0482fb2a8e8c8c4d8c6af0 https://www.encodeproject.org/files/ENCFF631UKM/@@download/ENCFF631UKM.bigWig GRCh38 released ENCFF256GKD bigWig signal p-value ENCSR990AZC ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM3-human ENCAB353TGR DNA False 2016-09-27 ENCODE 2 ENCFF145NON, ENCFF227IZS, ENCFF910IKB 1659091883 ENCODE Processing Pipeline 75bb83beae1f0ee92cb6cdd8cebae318 https://www.encodeproject.org/files/ENCFF256GKD/@@download/ENCFF256GKD.bigWig GRCh38 released ENCFF367WKR bigWig signal p-value ENCSR990AZC ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM3-human ENCAB353TGR DNA False 2016-09-27 ENCODE 1, 2 ENCFF145NON, ENCFF227IZS, ENCFF668FCG, ENCFF910IKB 2126016569 ENCODE Processing Pipeline ec37c6fd916519733e7ac07f03d0ed95 https://www.encodeproject.org/files/ENCFF367WKR/@@download/ENCFF367WKR.bigWig GRCh38 released ENCFF784PNF bigWig fold change over control ENCSR990AZC ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM3-human ENCAB353TGR DNA False 2016-09-27 ENCODE 1 ENCFF668FCG, ENCFF910IKB 1354163764 ENCODE Processing Pipeline 328fff08a385cddb6bbf9c9c351b9486 https://www.encodeproject.org/files/ENCFF784PNF/@@download/ENCFF784PNF.bigWig GRCh38 released ENCFF362LEI bigWig fold change over control ENCSR990AZC ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM3-human ENCAB353TGR DNA False 2016-09-27 ENCODE 2 ENCFF145NON, ENCFF227IZS, ENCFF910IKB 1911099147 ENCODE Processing Pipeline 422cf9a8f103b6421558190bda4ecddf https://www.encodeproject.org/files/ENCFF362LEI/@@download/ENCFF362LEI.bigWig GRCh38 released ENCFF419BHQ bigWig fold change over control ENCSR990AZC ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM3-human ENCAB353TGR DNA False 2016-09-27 ENCODE 1, 2 ENCFF145NON, ENCFF227IZS, ENCFF668FCG, ENCFF910IKB 2451685638 ENCODE Processing Pipeline f6ebd080380606b5d9e2b20be5824846 https://www.encodeproject.org/files/ENCFF419BHQ/@@download/ENCFF419BHQ.bigWig GRCh38 released ENCFF209WCI bed narrowPeak peaks ENCSR990AZC ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM3-human ENCAB353TGR DNA False 2016-09-27 ENCODE 1 ENCFF668FCG, ENCFF910IKB 6502942 ENCODE Processing Pipeline ef14b3ef0c28e0e8c859f6514c67555f https://www.encodeproject.org/files/ENCFF209WCI/@@download/ENCFF209WCI.bed.gz GRCh38 released ENCFF007DSK bigBed narrowPeak peaks ENCSR990AZC ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM3-human ENCAB353TGR DNA False 2016-09-27 ENCODE 1 ENCFF209WCI 11036534 ENCODE Processing Pipeline 102ae7c05def047068c3bac194811cc2 https://www.encodeproject.org/files/ENCFF007DSK/@@download/ENCFF007DSK.bigBed GRCh38 released ENCFF487PEJ bigBed narrowPeak peaks ENCSR990AZC ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM3-human ENCAB353TGR DNA False 2016-09-27 ENCODE 2 ENCFF799RSQ 10956940 ENCODE Processing Pipeline 6816d99117bc0a209c781b19dff75e85 https://www.encodeproject.org/files/ENCFF487PEJ/@@download/ENCFF487PEJ.bigBed GRCh38 released ENCFF799RSQ bed narrowPeak peaks ENCSR990AZC ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM3-human ENCAB353TGR DNA False 2016-09-27 ENCODE 2 ENCFF145NON, ENCFF227IZS, ENCFF910IKB 7010408 ENCODE Processing Pipeline 9439994cd87a99d3dc7df0f035af8883 https://www.encodeproject.org/files/ENCFF799RSQ/@@download/ENCFF799RSQ.bed.gz GRCh38 released ENCFF483MZB bed narrowPeak peaks ENCSR990AZC ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM3-human ENCAB353TGR DNA False 2016-09-27 ENCODE 1, 2 ENCFF145NON, ENCFF227IZS, ENCFF668FCG, ENCFF910IKB 7234067 ENCODE Processing Pipeline ddec7b234e581e12173910bd3fb5d9f8 https://www.encodeproject.org/files/ENCFF483MZB/@@download/ENCFF483MZB.bed.gz GRCh38 released ENCFF122GOC bed narrowPeak conservative idr thresholded peaks ENCSR990AZC ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM3-human ENCAB353TGR DNA False 2016-09-27 ENCODE 1, 2 ENCFF209WCI, ENCFF419RSJ, ENCFF483MZB, ENCFF799RSQ 30438 ENCODE Processing Pipeline 9bc7be50679ae4d8c6eb6c09da1b758d https://www.encodeproject.org/files/ENCFF122GOC/@@download/ENCFF122GOC.bed.gz GRCh38 released ENCFF922PVI bigBed narrowPeak conservative idr thresholded peaks ENCSR990AZC ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM3-human ENCAB353TGR DNA False 2016-09-27 ENCODE 1, 2 ENCFF122GOC 120678 ENCODE Processing Pipeline 6547e1467c06626f45193b67df432243 https://www.encodeproject.org/files/ENCFF922PVI/@@download/ENCFF922PVI.bigBed GRCh38 released ENCFF672PYP bed narrowPeak optimal idr thresholded peaks ENCSR990AZC ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM3-human ENCAB353TGR DNA False 2016-09-27 ENCODE 1, 2 ENCFF209WCI, ENCFF419RSJ, ENCFF483MZB, ENCFF799RSQ 51856 ENCODE Processing Pipeline 6c8a3fa3bb9dcefb3bb5f8c48cd57489 https://www.encodeproject.org/files/ENCFF672PYP/@@download/ENCFF672PYP.bed.gz GRCh38 released ENCFF040QJR bigBed narrowPeak peaks ENCSR990AZC ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM3-human ENCAB353TGR DNA False 2016-09-27 ENCODE 1, 2 ENCFF483MZB 10910236 ENCODE Processing Pipeline 421c75e102be1ceb484659d25d726432 https://www.encodeproject.org/files/ENCFF040QJR/@@download/ENCFF040QJR.bigBed GRCh38 released ENCFF509ARI bigBed narrowPeak optimal idr thresholded peaks ENCSR990AZC ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM3-human ENCAB353TGR DNA False 2016-09-27 ENCODE 1, 2 ENCFF672PYP 158136 ENCODE Processing Pipeline 0f64b7f726a70b2f64ab238c8704b5a2 https://www.encodeproject.org/files/ENCFF509ARI/@@download/ENCFF509ARI.bigBed GRCh38 released ENCFF313OQV bam unfiltered alignments ENCSR647ZXA ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-MEF2D-human ENCAB728YTO DNA False 2016-08-24 ENCODE 2 100 ENCFF703DNA, ENCFF807MUK, ENCFF958CZA 4781652394 ENCODE Processing Pipeline 8d47e92f6d855a2864d9edb4074aa490 https://www.encodeproject.org/files/ENCFF313OQV/@@download/ENCFF313OQV.bam hg19 released missing genetic modification characterization, low read depth missing control alignments ENCFF673WEJ bam unfiltered alignments ENCSR647ZXA ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-MEF2D-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1 100 ENCFF482ODR, ENCFF807MUK, ENCFF987YBA 3741170938 ENCODE Processing Pipeline d41353a9b9b10e8c22a4d81bee985abe https://www.encodeproject.org/files/ENCFF673WEJ/@@download/ENCFF673WEJ.bam hg19 released missing genetic modification characterization, low read depth missing control alignments ENCFF958CZA fastq reads ENCSR647ZXA ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-MEF2D-human ENCAB728YTO DNA False 2016-08-24 ENCODE 2 1 100 paired-ended 2 ENCFF703DNA 2171792251 Michael Snyder, Stanford 122de01c2d663a9e400e8a76fe115f8e SRA:SRR5111903 https://www.encodeproject.org/files/ENCFF958CZA/@@download/ENCFF958CZA.fastq.gz Illumina HiSeq 2000 /files/ENCFF132ASO/, /files/ENCFF650GDL/ released missing genetic modification characterization, low read depth missing control alignments ENCFF482ODR fastq reads ENCSR647ZXA ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-MEF2D-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1 1 100 paired-ended 2 ENCFF987YBA 1711870433 Michael Snyder, Stanford 3139d9466ac2349c00aae742de18854e SRA:SRR5111902 https://www.encodeproject.org/files/ENCFF482ODR/@@download/ENCFF482ODR.fastq.gz Illumina HiSeq 2000 /files/ENCFF132ASO/, /files/ENCFF650GDL/ released missing genetic modification characterization, low read depth missing control alignments ENCFF703DNA fastq reads ENCSR647ZXA ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-MEF2D-human ENCAB728YTO DNA False 2016-08-24 ENCODE 2 1 100 paired-ended 1 ENCFF958CZA 2043048258 Michael Snyder, Stanford 29f1ae8862ab6303ab58c6345252c3d1 SRA:SRR5111903 https://www.encodeproject.org/files/ENCFF703DNA/@@download/ENCFF703DNA.fastq.gz Illumina HiSeq 2000 /files/ENCFF132ASO/, /files/ENCFF650GDL/ released missing genetic modification characterization, low read depth missing control alignments ENCFF987YBA fastq reads ENCSR647ZXA ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-MEF2D-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1 1 100 paired-ended 1 ENCFF482ODR 1634965699 Michael Snyder, Stanford 8f72b86d5cf202be9d5f4e2ddb1ec8dd SRA:SRR5111902 https://www.encodeproject.org/files/ENCFF987YBA/@@download/ENCFF987YBA.fastq.gz Illumina HiSeq 2000 /files/ENCFF132ASO/, /files/ENCFF650GDL/ released missing genetic modification characterization, low read depth missing control alignments ENCFF124TQP bam alignments ENCSR647ZXA ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-MEF2D-human ENCAB728YTO DNA False 2016-08-24 ENCODE 2 ENCFF703DNA, ENCFF807MUK, ENCFF958CZA 3436790908 ENCODE Processing Pipeline 5f2d9e3bad6fa2d5ebaed8f7b481787d https://www.encodeproject.org/files/ENCFF124TQP/@@download/ENCFF124TQP.bam hg19 released missing genetic modification characterization, low read depth missing control alignments ENCFF132XOC bam alignments ENCSR647ZXA ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-MEF2D-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1 ENCFF482ODR, ENCFF807MUK, ENCFF987YBA 3049261310 ENCODE Processing Pipeline 7c4e6ddf8559731a2f77f30f4ce263e6 https://www.encodeproject.org/files/ENCFF132XOC/@@download/ENCFF132XOC.bam hg19 released missing genetic modification characterization, low read depth missing control alignments ENCFF628LDC bigWig signal p-value ENCSR647ZXA ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-MEF2D-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1 ENCFF132XOC, ENCFF587NFZ 742674291 ENCODE Processing Pipeline 2c464f838558520f989baad922114e72 https://www.encodeproject.org/files/ENCFF628LDC/@@download/ENCFF628LDC.bigWig hg19 released missing genetic modification characterization, low read depth missing control alignments ENCFF095REB bigWig signal p-value ENCSR647ZXA ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-MEF2D-human ENCAB728YTO DNA False 2016-08-24 ENCODE 2 ENCFF124TQP, ENCFF587NFZ 800796597 ENCODE Processing Pipeline bf8ba9bc8503db7e8fe87529aa7d8729 https://www.encodeproject.org/files/ENCFF095REB/@@download/ENCFF095REB.bigWig hg19 released missing genetic modification characterization, low read depth missing control alignments ENCFF366PTL bigWig signal p-value ENCSR647ZXA ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-MEF2D-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF124TQP, ENCFF132XOC, ENCFF587NFZ 1120678290 ENCODE Processing Pipeline 3007a0265ba051d873309c958cbe300a https://www.encodeproject.org/files/ENCFF366PTL/@@download/ENCFF366PTL.bigWig hg19 released missing genetic modification characterization, low read depth missing control alignments ENCFF981VAE bigWig fold change over control ENCSR647ZXA ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-MEF2D-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1 ENCFF132XOC, ENCFF587NFZ 830457404 ENCODE Processing Pipeline d2a46c90c13cd294641ef2158f3b7025 https://www.encodeproject.org/files/ENCFF981VAE/@@download/ENCFF981VAE.bigWig hg19 released missing genetic modification characterization, low read depth missing control alignments ENCFF739OKV bigBed narrowPeak peaks ENCSR647ZXA ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-MEF2D-human ENCAB728YTO DNA False 2016-08-24 ENCODE 2 ENCFF369MAB 13349744 ENCODE Processing Pipeline fa00c1f53e82bd8ea58fc6194e78401c https://www.encodeproject.org/files/ENCFF739OKV/@@download/ENCFF739OKV.bigBed hg19 released missing genetic modification characterization, low read depth missing control alignments ENCFF170VIW bed narrowPeak peaks ENCSR647ZXA ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-MEF2D-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1 ENCFF132XOC, ENCFF587NFZ 6469689 ENCODE Processing Pipeline da1a2393510932d7e6a5e9280790a881 https://www.encodeproject.org/files/ENCFF170VIW/@@download/ENCFF170VIW.bed.gz hg19 released missing genetic modification characterization, low read depth missing control alignments ENCFF369MAB bed narrowPeak peaks ENCSR647ZXA ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-MEF2D-human ENCAB728YTO DNA False 2016-08-24 ENCODE 2 ENCFF124TQP, ENCFF587NFZ 6413409 ENCODE Processing Pipeline 3c8dc9701c59e3459d05d0c85a53f7e7 https://www.encodeproject.org/files/ENCFF369MAB/@@download/ENCFF369MAB.bed.gz hg19 released missing genetic modification characterization, low read depth missing control alignments ENCFF669WIT bigBed narrowPeak peaks ENCSR647ZXA ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-MEF2D-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF345KFF 13130344 ENCODE Processing Pipeline 764b1ac4631356ff0a30c43a991add33 https://www.encodeproject.org/files/ENCFF669WIT/@@download/ENCFF669WIT.bigBed hg19 released missing genetic modification characterization, low read depth missing control alignments ENCFF257RYT bed narrowPeak optimal idr thresholded peaks ENCSR647ZXA ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-MEF2D-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF001TDO, ENCFF170VIW, ENCFF345KFF, ENCFF369MAB 270622 ENCODE Processing Pipeline 7e3090a199e6b19be857acc869c561a1 https://www.encodeproject.org/files/ENCFF257RYT/@@download/ENCFF257RYT.bed.gz hg19 released missing genetic modification characterization, low read depth missing control alignments ENCFF345KFF bed narrowPeak peaks ENCSR647ZXA ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-MEF2D-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF124TQP, ENCFF132XOC, ENCFF587NFZ 7050591 ENCODE Processing Pipeline ff61621cea4897c161f8b69f2d4ea21c https://www.encodeproject.org/files/ENCFF345KFF/@@download/ENCFF345KFF.bed.gz hg19 released missing genetic modification characterization, low read depth missing control alignments ENCFF635FMD bigWig fold change over control ENCSR647ZXA ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-MEF2D-human ENCAB728YTO DNA False 2016-08-24 ENCODE 2 ENCFF124TQP, ENCFF587NFZ 860567978 ENCODE Processing Pipeline 0b4826bcd99a476264054e792ee5d2cc https://www.encodeproject.org/files/ENCFF635FMD/@@download/ENCFF635FMD.bigWig hg19 released missing genetic modification characterization, low read depth missing control alignments ENCFF311QYP bigWig fold change over control ENCSR647ZXA ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-MEF2D-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF124TQP, ENCFF132XOC, ENCFF587NFZ 1287701680 ENCODE Processing Pipeline 0474c2251916e9599868b8af1b32d45d https://www.encodeproject.org/files/ENCFF311QYP/@@download/ENCFF311QYP.bigWig hg19 released missing genetic modification characterization, low read depth missing control alignments ENCFF815VGW bigBed narrowPeak peaks ENCSR647ZXA ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-MEF2D-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1 ENCFF170VIW 13308859 ENCODE Processing Pipeline b54f9b2f096bab75012cbd060119a641 https://www.encodeproject.org/files/ENCFF815VGW/@@download/ENCFF815VGW.bigBed hg19 released missing genetic modification characterization, low read depth missing control alignments ENCFF776UTN bed narrowPeak conservative idr thresholded peaks ENCSR647ZXA ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-MEF2D-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF001TDO, ENCFF170VIW, ENCFF345KFF, ENCFF369MAB 230173 ENCODE Processing Pipeline d2dc072bac32b1a8a4b80447f779b60a https://www.encodeproject.org/files/ENCFF776UTN/@@download/ENCFF776UTN.bed.gz hg19 released missing genetic modification characterization, low read depth missing control alignments ENCFF207HGO bigBed narrowPeak conservative idr thresholded peaks ENCSR647ZXA ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-MEF2D-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF776UTN 525023 ENCODE Processing Pipeline ee2719b247a646b0ba8e7adc553d0ebf https://www.encodeproject.org/files/ENCFF207HGO/@@download/ENCFF207HGO.bigBed hg19 released missing genetic modification characterization, low read depth missing control alignments ENCFF793VCZ bigBed narrowPeak optimal idr thresholded peaks ENCSR647ZXA ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-MEF2D-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF257RYT 590218 ENCODE Processing Pipeline d021bfcd60895e79ff85db3713aa65d7 https://www.encodeproject.org/files/ENCFF793VCZ/@@download/ENCFF793VCZ.bigBed hg19 released missing genetic modification characterization, low read depth missing control alignments ENCFF968AVX bam unfiltered alignments ENCSR647ZXA ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-MEF2D-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1 100 ENCFF482ODR, ENCFF643CGH, ENCFF987YBA 3746599648 ENCODE Processing Pipeline 9545359b3a8f6e09192731d55cf9387a https://www.encodeproject.org/files/ENCFF968AVX/@@download/ENCFF968AVX.bam GRCh38 released missing genetic modification characterization, low read depth missing control alignments ENCFF161JEL bam unfiltered alignments ENCSR647ZXA ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-MEF2D-human ENCAB728YTO DNA False 2016-08-24 ENCODE 2 100 ENCFF643CGH, ENCFF703DNA, ENCFF958CZA 4791520453 ENCODE Processing Pipeline c18c2bc074a41cbcb505da5c709f4100 https://www.encodeproject.org/files/ENCFF161JEL/@@download/ENCFF161JEL.bam GRCh38 released missing genetic modification characterization, low read depth missing control alignments ENCFF047IWR bam alignments ENCSR647ZXA ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-MEF2D-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1 100 ENCFF482ODR, ENCFF643CGH, ENCFF987YBA 3050785616 ENCODE Processing Pipeline 8936c9d137f75beb9801c03330b6af1e https://www.encodeproject.org/files/ENCFF047IWR/@@download/ENCFF047IWR.bam GRCh38 released missing genetic modification characterization, low read depth missing control alignments ENCFF662HRL bam alignments ENCSR647ZXA ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-MEF2D-human ENCAB728YTO DNA False 2016-08-24 ENCODE 2 100 ENCFF643CGH, ENCFF703DNA, ENCFF958CZA 3439373677 ENCODE Processing Pipeline 2345c765358000c245c049a418898537 https://www.encodeproject.org/files/ENCFF662HRL/@@download/ENCFF662HRL.bam GRCh38 released missing genetic modification characterization, low read depth missing control alignments ENCFF567PHN bigWig signal p-value ENCSR647ZXA ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-MEF2D-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1 ENCFF047IWR 836257230 ENCODE Processing Pipeline a80a272fe5a9360e5d5aaf64eb8ca01d https://www.encodeproject.org/files/ENCFF567PHN/@@download/ENCFF567PHN.bigWig GRCh38 released missing genetic modification characterization, low read depth missing control alignments ENCFF931MMV bigWig signal p-value ENCSR647ZXA ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-MEF2D-human ENCAB728YTO DNA False 2016-08-24 ENCODE 2 ENCFF662HRL 861291754 ENCODE Processing Pipeline dfb6b59dcdb2cae9f521914332c59cac https://www.encodeproject.org/files/ENCFF931MMV/@@download/ENCFF931MMV.bigWig GRCh38 released missing genetic modification characterization, low read depth missing control alignments ENCFF792POC bigWig signal p-value ENCSR647ZXA ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-MEF2D-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF047IWR, ENCFF662HRL 1127587473 ENCODE Processing Pipeline 33a9e88ea326721fa3aeb9f508d568ef https://www.encodeproject.org/files/ENCFF792POC/@@download/ENCFF792POC.bigWig GRCh38 released missing genetic modification characterization, low read depth missing control alignments ENCFF871MCF bigWig fold change over control ENCSR647ZXA ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-MEF2D-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1 ENCFF047IWR 829658810 ENCODE Processing Pipeline 61016c9c05f18390b6b20ad4101836b8 https://www.encodeproject.org/files/ENCFF871MCF/@@download/ENCFF871MCF.bigWig GRCh38 released missing genetic modification characterization, low read depth missing control alignments ENCFF049SHX bigWig fold change over control ENCSR647ZXA ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-MEF2D-human ENCAB728YTO DNA False 2016-08-24 ENCODE 2 ENCFF662HRL 860205655 ENCODE Processing Pipeline 1e1f6b91fc947b878637c4cd5f284a0f https://www.encodeproject.org/files/ENCFF049SHX/@@download/ENCFF049SHX.bigWig GRCh38 released missing genetic modification characterization, low read depth missing control alignments ENCFF098CBY bigWig fold change over control ENCSR647ZXA ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-MEF2D-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF047IWR, ENCFF662HRL 1297993510 ENCODE Processing Pipeline cf515aa10f949d90a82a315663436081 https://www.encodeproject.org/files/ENCFF098CBY/@@download/ENCFF098CBY.bigWig GRCh38 released missing genetic modification characterization, low read depth missing control alignments ENCFF255VIQ bigBed narrowPeak peaks ENCSR647ZXA ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-MEF2D-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1 ENCFF007YKY 13310512 ENCODE Processing Pipeline 00d3c821270e3ff9d26aa74e45d12ad4 https://www.encodeproject.org/files/ENCFF255VIQ/@@download/ENCFF255VIQ.bigBed GRCh38 released missing genetic modification characterization, low read depth missing control alignments ENCFF822JLL bigBed narrowPeak peaks ENCSR647ZXA ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-MEF2D-human ENCAB728YTO DNA False 2016-08-24 ENCODE 2 ENCFF171DGV 13360336 ENCODE Processing Pipeline 07d435fef1623f883f02221699cd1ea9 https://www.encodeproject.org/files/ENCFF822JLL/@@download/ENCFF822JLL.bigBed GRCh38 released missing genetic modification characterization, low read depth missing control alignments ENCFF007YKY bed narrowPeak peaks ENCSR647ZXA ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-MEF2D-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1 ENCFF047IWR 6323536 ENCODE Processing Pipeline 0563937b862d4d53151640c42c9642a2 https://www.encodeproject.org/files/ENCFF007YKY/@@download/ENCFF007YKY.bed.gz GRCh38 released missing genetic modification characterization, low read depth missing control alignments ENCFF309OUB bed narrowPeak peaks ENCSR647ZXA ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-MEF2D-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF047IWR, ENCFF662HRL 6991139 ENCODE Processing Pipeline dd167a1561914b9ac738499f1a691e10 https://www.encodeproject.org/files/ENCFF309OUB/@@download/ENCFF309OUB.bed.gz GRCh38 released missing genetic modification characterization, low read depth missing control alignments ENCFF171DGV bed narrowPeak peaks ENCSR647ZXA ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-MEF2D-human ENCAB728YTO DNA False 2016-08-24 ENCODE 2 ENCFF662HRL 6277653 ENCODE Processing Pipeline 3fd275633ca21c0831c422c18c969680 https://www.encodeproject.org/files/ENCFF171DGV/@@download/ENCFF171DGV.bed.gz GRCh38 released missing genetic modification characterization, low read depth missing control alignments ENCFF014VRD bed narrowPeak conservative idr thresholded peaks ENCSR647ZXA ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-MEF2D-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF007YKY, ENCFF171DGV, ENCFF309OUB, ENCFF419RSJ 231998 ENCODE Processing Pipeline cbf6e087e8c23d649ea371e666b3fb07 https://www.encodeproject.org/files/ENCFF014VRD/@@download/ENCFF014VRD.bed.gz GRCh38 released missing genetic modification characterization, low read depth missing control alignments ENCFF333RKA bigBed narrowPeak conservative idr thresholded peaks ENCSR647ZXA ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-MEF2D-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF014VRD 530388 ENCODE Processing Pipeline 2a1bf1d704f54871e20a020fba0da25d https://www.encodeproject.org/files/ENCFF333RKA/@@download/ENCFF333RKA.bigBed GRCh38 released missing genetic modification characterization, low read depth missing control alignments ENCFF932ULW bigBed narrowPeak peaks ENCSR647ZXA ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-MEF2D-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF309OUB 13146598 ENCODE Processing Pipeline 52249ffd13cb8f71a66e31da4f78d13d https://www.encodeproject.org/files/ENCFF932ULW/@@download/ENCFF932ULW.bigBed GRCh38 released missing genetic modification characterization, low read depth missing control alignments ENCFF436DME bed narrowPeak optimal idr thresholded peaks ENCSR647ZXA ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-MEF2D-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF007YKY, ENCFF171DGV, ENCFF309OUB, ENCFF419RSJ 269263 ENCODE Processing Pipeline a24d0901a1740e0003b54864aabf5c15 https://www.encodeproject.org/files/ENCFF436DME/@@download/ENCFF436DME.bed.gz GRCh38 released missing genetic modification characterization, low read depth missing control alignments ENCFF568EWM bigBed narrowPeak optimal idr thresholded peaks ENCSR647ZXA ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-MEF2D-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF436DME 591268 ENCODE Processing Pipeline c7f501c8ef00b5c5335b7a0d32f69583 https://www.encodeproject.org/files/ENCFF568EWM/@@download/ENCFF568EWM.bigBed GRCh38 released missing genetic modification characterization, low read depth missing control alignments ENCFF000YFB bigBed narrowPeak peaks ENCSR000DNZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF1-human ENCAB000ASR DNA see document see document False 2012-05-14 ENCODE ENCFF001VLX 1861649 Kevin Struhl, HMS d479013c183624d8964988df2f244926 https://www.encodeproject.org/files/ENCFF000YFB/@@download/ENCFF000YFB.bigBed hg19 released low read length biological replicates with identical biosample ENCFF000YFC fastq reads ENCSR000DNZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF1-human ENCAB000ASR DNA see document see document False 2012-05-14 ENCODE 1 1 36 single-ended 1197728872 Kevin Struhl, HMS 951a4ba4b33763070cc8d227292b5900 https://www.encodeproject.org/files/ENCFF000YFC/@@download/ENCFF000YFC.fastq.gz Illumina Genome Analyzer /files/ENCFF000YRN/ released inconsistent control read length, low read length biological replicates with identical biosample ENCFF000YFE fastq reads ENCSR000DNZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF1-human ENCAB000ASR DNA see document see document False 2012-05-14 ENCODE 2 1 36 single-ended 1417838165 Kevin Struhl, HMS fff138976284100ca6c0d7460005adfc https://www.encodeproject.org/files/ENCFF000YFE/@@download/ENCFF000YFE.fastq.gz Illumina Genome Analyzer /files/ENCFF000YRC/ released inconsistent control read length, low read length biological replicates with identical biosample ENCFF000YFF bam alignments ENCSR000DNZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF1-human ENCAB000ASR DNA see document see document False 2012-05-14 ENCODE 1 ENCFF000YFC 620600383 Kevin Struhl, HMS 39b0e9a06a04b0271929092b25490f4c https://www.encodeproject.org/files/ENCFF000YFF/@@download/ENCFF000YFF.bam hg19 released low read length biological replicates with identical biosample ENCFF000YFH bigWig signal ENCSR000DNZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF1-human ENCAB000ASR DNA see document see document False 2012-05-14 ENCODE 430421426 Kevin Struhl, HMS 29cfd49de2206195dc3c4410ed1f7ab8 https://www.encodeproject.org/files/ENCFF000YFH/@@download/ENCFF000YFH.bigWig hg19 released low read length biological replicates with identical biosample, missing derived_from ENCFF000YFI bam alignments ENCSR000DNZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF1-human ENCAB000ASR DNA see document see document False 2012-05-14 ENCODE 2 ENCFF000YFE 687640730 Kevin Struhl, HMS 9e5ea5e2246e678839920cb827ae472e https://www.encodeproject.org/files/ENCFF000YFI/@@download/ENCFF000YFI.bam hg19 released low read length biological replicates with identical biosample ENCFF001VLX bed narrowPeak peaks ENCSR000DNZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF1-human ENCAB000ASR DNA see document see document False 2012-05-14 ENCODE 834029 Kevin Struhl, HMS 95c2925ddbe06732dab3375c07d57fd0 https://www.encodeproject.org/files/ENCFF001VLX/@@download/ENCFF001VLX.bed.gz hg19 released low read length biological replicates with identical biosample, missing derived_from ENCFF002CVM bed narrowPeak optimal idr thresholded peaks ENCSR000DNZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF1-human ENCAB000ASR DNA see document see document False 2012-05-14 ENCODE 373491 ENCODE Consortium Analysis Working Group 225df5bb216e466ac39f799e1eaa6e61 https://www.encodeproject.org/files/ENCFF002CVM/@@download/ENCFF002CVM.bed.gz hg19 released low read length biological replicates with identical biosample, missing derived_from ENCFF254UOG bigBed narrowPeak optimal idr thresholded peaks ENCSR000DNZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF1-human ENCAB000ASR DNA see document see document False 2012-05-14 ENCODE ENCFF002CVM 890164 ENCODE Consortium 6c8f32b74d0dcb6cdca50b5174beaa37 https://www.encodeproject.org/files/ENCFF254UOG/@@download/ENCFF254UOG.bigBed hg19 released low read length biological replicates with identical biosample ENCFF000QFM bam alignments ENCSR000BLR ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2011-07-18 ENCODE 1 ENCFF000QFY 1104731999 Richard Myers, HAIB 1b02f6f4302d2d466ca2747abc203625 https://www.encodeproject.org/files/ENCFF000QFM/@@download/ENCFF000QFM.bam hg19 archived low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, control insufficient read depth ENCFF000QFN bigBed broadPeak peaks ENCSR000BLR ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2011-07-18 ENCODE 1 1 ENCFF001UKZ 125019 Richard Myers, HAIB e924b8a2de2ecce4335a7f5906e6d203 https://www.encodeproject.org/files/ENCFF000QFN/@@download/ENCFF000QFN.bigBed hg19 archived low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, control insufficient read depth ENCFF000QFO bigBed broadPeak peaks ENCSR000BLR ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2011-07-18 ENCODE 2 1 ENCFF001ULA 377061 Richard Myers, HAIB d3003871ef08d54da2af62e02f91b0ff https://www.encodeproject.org/files/ENCFF000QFO/@@download/ENCFF000QFO.bigBed hg19 archived low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, control insufficient read depth ENCFF000QFP bam alignments ENCSR000BLR ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2011-07-18 ENCODE 2 ENCFF000QGA 1389342272 Richard Myers, HAIB 69bd7e663fc080eab0918eefd926cb92 https://www.encodeproject.org/files/ENCFF000QFP/@@download/ENCFF000QFP.bam hg19 archived low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, control insufficient read depth ENCFF000QFQ bigWig raw signal ENCSR000BLR ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2011-07-18 ENCODE 1 1 16013780 Richard Myers, HAIB e5e803450632812fda3a7257ade0070f https://www.encodeproject.org/files/ENCFF000QFQ/@@download/ENCFF000QFQ.bigWig hg19 archived low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample, missing derived_from insufficient replicate concordance, control insufficient read depth ENCFF000QFR bigWig raw signal ENCSR000BLR ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2011-07-18 ENCODE 2 1 31940480 Richard Myers, HAIB ac6c43f9136a41b238d4d6bf487edd15 https://www.encodeproject.org/files/ENCFF000QFR/@@download/ENCFF000QFR.bigWig hg19 archived low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample, missing derived_from insufficient replicate concordance, control insufficient read depth ENCFF000QFY fastq reads ENCSR000BLR ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2011-07-18 ENCODE 1 1 36 single-ended 1020121151 Richard Myers, HAIB a097769d3b4cf57bdd13e0001d0bd107 https://www.encodeproject.org/files/ENCFF000QFY/@@download/ENCFF000QFY.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000QEX/ released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, control insufficient read depth ENCFF000QGA fastq reads ENCSR000BLR ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2011-07-18 ENCODE 2 1 36 single-ended 1334965584 Richard Myers, HAIB 9e18df3f57739452f007b4427357a2e1 https://www.encodeproject.org/files/ENCFF000QGA/@@download/ENCFF000QGA.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000QEX/ released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, control insufficient read depth ENCFF001UKZ bed broadPeak peaks ENCSR000BLR ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2011-07-18 ENCODE 1 1 41434 Richard Myers, HAIB 3370f7be2274c325532db967868d8f3d https://www.encodeproject.org/files/ENCFF001UKZ/@@download/ENCFF001UKZ.bed.gz hg19 archived low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample, missing derived_from insufficient replicate concordance, control insufficient read depth ENCFF001ULA bed broadPeak peaks ENCSR000BLR ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2011-07-18 ENCODE 2 1 211027 Richard Myers, HAIB f5e879a43aabcb257b8553eed167e53a https://www.encodeproject.org/files/ENCFF001ULA/@@download/ENCFF001ULA.bed.gz hg19 archived low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample, missing derived_from insufficient replicate concordance, control insufficient read depth ENCFF002CML bed narrowPeak optimal idr thresholded peaks ENCSR000BLR ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2011-07-18 ENCODE 289014 ENCODE Consortium Analysis Working Group bda8755d57b4e4a73c98bd34c38c2fe1 https://www.encodeproject.org/files/ENCFF002CML/@@download/ENCFF002CML.bed.gz hg19 archived low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample, missing derived_from insufficient replicate concordance, control insufficient read depth ENCFF141QDT bigBed narrowPeak optimal idr thresholded peaks ENCSR000BLR ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2011-07-18 ENCODE ENCFF002CML 715121 ENCODE Consortium c836d6d36f60ebc89400eced6979a54f https://www.encodeproject.org/files/ENCFF141QDT/@@download/ENCFF141QDT.bigBed hg19 archived low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, control insufficient read depth ENCFF329LWM bam alignments ENCSR000BLR ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000QFY, ENCFF643CGH 682820508 ENCODE Processing Pipeline 92f019effc0dde5f35af91880b0df07a https://www.encodeproject.org/files/ENCFF329LWM/@@download/ENCFF329LWM.bam GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, control insufficient read depth ENCFF669DGA bam unfiltered alignments ENCSR000BLR ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000QFY, ENCFF643CGH 1313492897 ENCODE Processing Pipeline 6aac345a8400ea0f6e28c52fd0f52532 https://www.encodeproject.org/files/ENCFF669DGA/@@download/ENCFF669DGA.bam GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, control insufficient read depth ENCFF466NDO bam unfiltered alignments ENCSR000BLR ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000QGA, ENCFF643CGH 1696529585 ENCODE Processing Pipeline 2ad11d045fc61c2ba8aecb7f5b0819c0 https://www.encodeproject.org/files/ENCFF466NDO/@@download/ENCFF466NDO.bam GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, control insufficient read depth ENCFF334QAB bam alignments ENCSR000BLR ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000QGA, ENCFF643CGH 883001618 ENCODE Processing Pipeline 1f65ed54747371e6c05b24bdfe31b8ce https://www.encodeproject.org/files/ENCFF334QAB/@@download/ENCFF334QAB.bam GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, control insufficient read depth ENCFF205GHW bam unfiltered alignments ENCSR000BLR ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000QFY, ENCFF807MUK 1308334504 ENCODE Processing Pipeline 0867a364871de94c1e6b54f7e5fe4ef7 https://www.encodeproject.org/files/ENCFF205GHW/@@download/ENCFF205GHW.bam hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, control insufficient read depth ENCFF154ZWB bam alignments ENCSR000BLR ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000QFY, ENCFF807MUK 683210409 ENCODE Processing Pipeline 05350367f4c464957b7b82f236fb87c8 https://www.encodeproject.org/files/ENCFF154ZWB/@@download/ENCFF154ZWB.bam hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, control insufficient read depth ENCFF125VLH bam unfiltered alignments ENCSR000BLR ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000QGA, ENCFF807MUK 1691121889 ENCODE Processing Pipeline 5bdd7fbc9afa63a18ea6e703a0c4f8fd https://www.encodeproject.org/files/ENCFF125VLH/@@download/ENCFF125VLH.bam hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, control insufficient read depth ENCFF696ANF bam alignments ENCSR000BLR ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000QGA, ENCFF807MUK 883557406 ENCODE Processing Pipeline 24250ac6c243fb14a61fb296bafc051d https://www.encodeproject.org/files/ENCFF696ANF/@@download/ENCFF696ANF.bam hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, control insufficient read depth ENCFF315OMI bigWig signal p-value ENCSR000BLR ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2011-07-18 ENCODE 1 ENCFF329LWM, ENCFF772PJM 214954553 ENCODE Processing Pipeline bacd841501d5ff6f04d36b7cbb8a11d3 https://www.encodeproject.org/files/ENCFF315OMI/@@download/ENCFF315OMI.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, control insufficient read depth ENCFF665IPD bigWig signal p-value ENCSR000BLR ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF329LWM, ENCFF334QAB, ENCFF772PJM 182538061 ENCODE Processing Pipeline fcbc63750bd2ccd3a13a4b47deea7b97 https://www.encodeproject.org/files/ENCFF665IPD/@@download/ENCFF665IPD.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, control insufficient read depth ENCFF175ESY bigWig fold change over control ENCSR000BLR ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2011-07-18 ENCODE 2 ENCFF334QAB, ENCFF772PJM 309837765 ENCODE Processing Pipeline 06a7917fb60d2c46bbe2d153951eea9a https://www.encodeproject.org/files/ENCFF175ESY/@@download/ENCFF175ESY.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, control insufficient read depth ENCFF876MPC bigWig fold change over control ENCSR000BLR ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF329LWM, ENCFF334QAB, ENCFF772PJM 507313232 ENCODE Processing Pipeline e27837e31b6377fd14b6be7cac8640c0 https://www.encodeproject.org/files/ENCFF876MPC/@@download/ENCFF876MPC.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, control insufficient read depth ENCFF566ABE bigWig signal p-value ENCSR000BLR ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2011-07-18 ENCODE 2 ENCFF334QAB, ENCFF772PJM 192662146 ENCODE Processing Pipeline e9b694cc18aa320a77b1dbd8baf797fc https://www.encodeproject.org/files/ENCFF566ABE/@@download/ENCFF566ABE.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, control insufficient read depth ENCFF397MIK bigWig fold change over control ENCSR000BLR ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2011-07-18 ENCODE 1 ENCFF329LWM, ENCFF772PJM 255098544 ENCODE Processing Pipeline 2fb256e06c1e112c73778eea1bbcb0ce https://www.encodeproject.org/files/ENCFF397MIK/@@download/ENCFF397MIK.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, control insufficient read depth ENCFF472UBP bigBed narrowPeak peaks ENCSR000BLR ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2011-07-18 ENCODE 1 ENCFF628XGA 291649 ENCODE Processing Pipeline b1e80c18d4b9a0afdbde0d7695aea2d9 https://www.encodeproject.org/files/ENCFF472UBP/@@download/ENCFF472UBP.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, control insufficient read depth ENCFF643PFS bed narrowPeak conservative idr thresholded peaks ENCSR000BLR ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF419RSJ, ENCFF628XGA, ENCFF740XTI, ENCFF966MTK 12457 ENCODE Processing Pipeline 8d04c895e8b5b66b9d80aae8eea917f7 https://www.encodeproject.org/files/ENCFF643PFS/@@download/ENCFF643PFS.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, control insufficient read depth ENCFF740XTI bed narrowPeak peaks ENCSR000BLR ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2011-07-18 ENCODE 2 ENCFF334QAB, ENCFF772PJM 4403214 ENCODE Processing Pipeline 74fbc7e9392c031558a90301479c9a20 https://www.encodeproject.org/files/ENCFF740XTI/@@download/ENCFF740XTI.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, control insufficient read depth ENCFF628XGA bed narrowPeak peaks ENCSR000BLR ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2011-07-18 ENCODE 1 ENCFF329LWM, ENCFF772PJM 89962 ENCODE Processing Pipeline e355484f1860478019b7368c7c5c6d76 https://www.encodeproject.org/files/ENCFF628XGA/@@download/ENCFF628XGA.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, control insufficient read depth ENCFF941WGF bigBed narrowPeak peaks ENCSR000BLR ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2011-07-18 ENCODE 2 ENCFF740XTI 10205700 ENCODE Processing Pipeline b1b06e36507075e27a40f79f77cb1a32 https://www.encodeproject.org/files/ENCFF941WGF/@@download/ENCFF941WGF.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, control insufficient read depth ENCFF407VGB bed narrowPeak optimal idr thresholded peaks ENCSR000BLR ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF419RSJ, ENCFF628XGA, ENCFF740XTI, ENCFF966MTK 35624 ENCODE Processing Pipeline 65f6f45f8f01ff27847c8d1f175cddb6 https://www.encodeproject.org/files/ENCFF407VGB/@@download/ENCFF407VGB.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, control insufficient read depth ENCFF966MTK bed narrowPeak peaks ENCSR000BLR ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF329LWM, ENCFF334QAB, ENCFF772PJM 4833456 ENCODE Processing Pipeline daa8283138c35cb43f1d943295216391 https://www.encodeproject.org/files/ENCFF966MTK/@@download/ENCFF966MTK.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, control insufficient read depth ENCFF088UIB bigBed narrowPeak peaks ENCSR000BLR ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF966MTK 10868402 ENCODE Processing Pipeline 1468a495cbe6194298810bdc04924e7f https://www.encodeproject.org/files/ENCFF088UIB/@@download/ENCFF088UIB.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, control insufficient read depth ENCFF569YSW bigBed narrowPeak conservative idr thresholded peaks ENCSR000BLR ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF643PFS 64276 ENCODE Processing Pipeline 5b8ec5882127f862ad4de3b9ba733dc9 https://www.encodeproject.org/files/ENCFF569YSW/@@download/ENCFF569YSW.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, control insufficient read depth ENCFF518BUB bigBed narrowPeak optimal idr thresholded peaks ENCSR000BLR ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF407VGB 113786 ENCODE Processing Pipeline 6d699ff8bdf203c127987f46819cf878 https://www.encodeproject.org/files/ENCFF518BUB/@@download/ENCFF518BUB.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, control insufficient read depth ENCFF308MNN bigWig signal p-value ENCSR000BLR ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2011-07-18 ENCODE 1 ENCFF154ZWB, ENCFF750MIM 215013281 ENCODE Processing Pipeline 1674ae8bae6a4b12841b28bc1deabc2a https://www.encodeproject.org/files/ENCFF308MNN/@@download/ENCFF308MNN.bigWig hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, control insufficient read depth ENCFF412DAN bigWig fold change over control ENCSR000BLR ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2011-07-18 ENCODE 1 ENCFF154ZWB, ENCFF750MIM 255203697 ENCODE Processing Pipeline 88fe3b5f2653d1fcaf5004d421d9c991 https://www.encodeproject.org/files/ENCFF412DAN/@@download/ENCFF412DAN.bigWig hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, control insufficient read depth ENCFF273XIF bigWig signal p-value ENCSR000BLR ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2011-07-18 ENCODE 2 ENCFF696ANF, ENCFF750MIM 192135413 ENCODE Processing Pipeline 16bab305c06e3a315f4e041efbc04fe1 https://www.encodeproject.org/files/ENCFF273XIF/@@download/ENCFF273XIF.bigWig hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, control insufficient read depth ENCFF300XWN bigWig signal p-value ENCSR000BLR ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF154ZWB, ENCFF696ANF, ENCFF750MIM 182560135 ENCODE Processing Pipeline 0c13f03c7b0e7afef64559ec69833281 https://www.encodeproject.org/files/ENCFF300XWN/@@download/ENCFF300XWN.bigWig hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, control insufficient read depth ENCFF937FEX bigWig fold change over control ENCSR000BLR ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2011-07-18 ENCODE 2 ENCFF696ANF, ENCFF750MIM 309674468 ENCODE Processing Pipeline b82212f41b17a2182ea60eeb11187ba3 https://www.encodeproject.org/files/ENCFF937FEX/@@download/ENCFF937FEX.bigWig hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, control insufficient read depth ENCFF520DLY bigWig fold change over control ENCSR000BLR ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF154ZWB, ENCFF696ANF, ENCFF750MIM 507817264 ENCODE Processing Pipeline e5dac1cfa7727836632442294aa69e03 https://www.encodeproject.org/files/ENCFF520DLY/@@download/ENCFF520DLY.bigWig hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, control insufficient read depth ENCFF562KJJ bigBed narrowPeak peaks ENCSR000BLR ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2011-07-18 ENCODE 1 ENCFF638TWN 293307 ENCODE Processing Pipeline 422a20aec7ab7bac87b680f0281f9c6d https://www.encodeproject.org/files/ENCFF562KJJ/@@download/ENCFF562KJJ.bigBed hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, control insufficient read depth ENCFF128YRA bigBed narrowPeak peaks ENCSR000BLR ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF701TJB 10808690 ENCODE Processing Pipeline 911a8cf6c626195befcd2d35011bd9d1 https://www.encodeproject.org/files/ENCFF128YRA/@@download/ENCFF128YRA.bigBed hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, control insufficient read depth ENCFF638TWN bed narrowPeak peaks ENCSR000BLR ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2011-07-18 ENCODE 1 ENCFF154ZWB, ENCFF750MIM 90874 ENCODE Processing Pipeline c715cc4d1528dbbe6f962990cf69f86a https://www.encodeproject.org/files/ENCFF638TWN/@@download/ENCFF638TWN.bed.gz hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, control insufficient read depth ENCFF453GLP bed narrowPeak peaks ENCSR000BLR ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2011-07-18 ENCODE 2 ENCFF696ANF, ENCFF750MIM 4405161 ENCODE Processing Pipeline 51309dfc21ce52b1d5332ff936e37bda https://www.encodeproject.org/files/ENCFF453GLP/@@download/ENCFF453GLP.bed.gz hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, control insufficient read depth ENCFF701TJB bed narrowPeak peaks ENCSR000BLR ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF154ZWB, ENCFF696ANF, ENCFF750MIM 4769264 ENCODE Processing Pipeline cf762b5e0bd7400d736a250250fb7ef8 https://www.encodeproject.org/files/ENCFF701TJB/@@download/ENCFF701TJB.bed.gz hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, control insufficient read depth ENCFF736XYI bigBed narrowPeak peaks ENCSR000BLR ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2011-07-18 ENCODE 2 ENCFF453GLP 10201442 ENCODE Processing Pipeline 2000bdbce0aca6b8e44785b9c5be8c5b https://www.encodeproject.org/files/ENCFF736XYI/@@download/ENCFF736XYI.bigBed hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, control insufficient read depth ENCFF490VNU bigBed narrowPeak optimal idr thresholded peaks ENCSR000BLR ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF803COK 111167 ENCODE Processing Pipeline adc1cdc9add593b85e7f45dc1f9ce5ba https://www.encodeproject.org/files/ENCFF490VNU/@@download/ENCFF490VNU.bigBed hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, control insufficient read depth ENCFF210HYN bed narrowPeak conservative idr thresholded peaks ENCSR000BLR ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF001TDO, ENCFF453GLP, ENCFF638TWN, ENCFF701TJB 12784 ENCODE Processing Pipeline 7a98224127440b9ae58d8bcf2f1e48ab https://www.encodeproject.org/files/ENCFF210HYN/@@download/ENCFF210HYN.bed.gz hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, control insufficient read depth ENCFF305YPY bigBed narrowPeak conservative idr thresholded peaks ENCSR000BLR ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF210HYN 64719 ENCODE Processing Pipeline da14d59ba1aab912c1bd7ca86cb6a6a4 https://www.encodeproject.org/files/ENCFF305YPY/@@download/ENCFF305YPY.bigBed hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, control insufficient read depth ENCFF803COK bed narrowPeak optimal idr thresholded peaks ENCSR000BLR ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIN3A-human ENCAB000AKS DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF001TDO, ENCFF453GLP, ENCFF638TWN, ENCFF701TJB 33975 ENCODE Processing Pipeline e601678321e35fd0a4da40e7902d95c4 https://www.encodeproject.org/files/ENCFF803COK/@@download/ENCFF803COK.bed.gz hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, control insufficient read depth ENCFF511MHY bam unfiltered alignments ENCSR085QEV ChIP-seq EFO:0002067 K562 cell line Homo sapiens NBN-human ENCAB543ANT DNA False 2016-06-14 ENCODE 1 100 ENCFF807MUK, ENCFF854CCC, ENCFF881JDL 4108588207 ENCODE Processing Pipeline 1ec7214e95b46af78cc1f0babad20cb9 https://www.encodeproject.org/files/ENCFF511MHY/@@download/ENCFF511MHY.bam hg19 released low read depth, mild to moderate bottlenecking ENCFF757THT bam unfiltered alignments ENCSR085QEV ChIP-seq EFO:0002067 K562 cell line Homo sapiens NBN-human ENCAB543ANT DNA False 2016-06-14 ENCODE 2 100 ENCFF321LCC, ENCFF581MDG, ENCFF807MUK 7027502175 ENCODE Processing Pipeline dd2238428a2c5daa8187f157e1615852 https://www.encodeproject.org/files/ENCFF757THT/@@download/ENCFF757THT.bam hg19 released low read depth, mild to moderate bottlenecking ENCFF581MDG fastq reads ENCSR085QEV ChIP-seq EFO:0002067 K562 cell line Homo sapiens NBN-human ENCAB543ANT DNA False 2016-06-14 ENCODE 2 1 100 paired-ended 2 ENCFF321LCC 3327339438 Michael Snyder, Stanford 638ef9ba519933b7f6f7fd46e3f93c64 SRA:SRR5111059 https://www.encodeproject.org/files/ENCFF581MDG/@@download/ENCFF581MDG.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFA/ released low read depth, mild to moderate bottlenecking ENCFF321LCC fastq reads ENCSR085QEV ChIP-seq EFO:0002067 K562 cell line Homo sapiens NBN-human ENCAB543ANT DNA False 2016-06-14 ENCODE 2 1 100 paired-ended 1 ENCFF581MDG 3239576574 Michael Snyder, Stanford cb6fa618467e164e83e97fe730c25828 SRA:SRR5111059 https://www.encodeproject.org/files/ENCFF321LCC/@@download/ENCFF321LCC.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFD/ released low read depth, mild to moderate bottlenecking ENCFF881JDL fastq reads ENCSR085QEV ChIP-seq EFO:0002067 K562 cell line Homo sapiens NBN-human ENCAB543ANT DNA False 2016-06-14 ENCODE 1 1 100 paired-ended 2 ENCFF854CCC 1906331476 Michael Snyder, Stanford aa7bbc22999c06d3a742c28243b8bcfb SRA:SRR5111060 https://www.encodeproject.org/files/ENCFF881JDL/@@download/ENCFF881JDL.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFH/ released low read depth, mild to moderate bottlenecking ENCFF854CCC fastq reads ENCSR085QEV ChIP-seq EFO:0002067 K562 cell line Homo sapiens NBN-human ENCAB543ANT DNA False 2016-06-14 ENCODE 1 1 100 paired-ended 1 ENCFF881JDL 1883208033 Michael Snyder, Stanford c9f578993971016450788080bfb1619d SRA:SRR5111060 https://www.encodeproject.org/files/ENCFF854CCC/@@download/ENCFF854CCC.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFF/ released low read depth, mild to moderate bottlenecking ENCFF948RVR bam alignments ENCSR085QEV ChIP-seq EFO:0002067 K562 cell line Homo sapiens NBN-human ENCAB543ANT DNA False 2016-06-14 ENCODE 1 100 ENCFF807MUK, ENCFF854CCC, ENCFF881JDL 3347954121 ENCODE Processing Pipeline c29a4800762a56eef472b279e60eb76c https://www.encodeproject.org/files/ENCFF948RVR/@@download/ENCFF948RVR.bam hg19 released low read depth, mild to moderate bottlenecking ENCFF262STC bam alignments ENCSR085QEV ChIP-seq EFO:0002067 K562 cell line Homo sapiens NBN-human ENCAB543ANT DNA False 2016-06-14 ENCODE 2 100 ENCFF321LCC, ENCFF581MDG, ENCFF807MUK 5486195713 ENCODE Processing Pipeline edd5c50c63d9de67f51e5136bf804ce0 https://www.encodeproject.org/files/ENCFF262STC/@@download/ENCFF262STC.bam hg19 released low read depth, mild to moderate bottlenecking ENCFF211FEP bigWig signal p-value ENCSR085QEV ChIP-seq EFO:0002067 K562 cell line Homo sapiens NBN-human ENCAB543ANT DNA False 2016-06-14 ENCODE 1 ENCFF581ZJL, ENCFF948RVR 1123137016 ENCODE Processing Pipeline 6d66adb07e4a654241009fbceb1b3d4a https://www.encodeproject.org/files/ENCFF211FEP/@@download/ENCFF211FEP.bigWig hg19 released low read depth, mild to moderate bottlenecking ENCFF385DNN bigWig signal p-value ENCSR085QEV ChIP-seq EFO:0002067 K562 cell line Homo sapiens NBN-human ENCAB543ANT DNA False 2016-06-14 ENCODE 2 ENCFF051LWI, ENCFF262STC 1235038724 ENCODE Processing Pipeline adb88a6de7a0d8ae27671f5f0a602d43 https://www.encodeproject.org/files/ENCFF385DNN/@@download/ENCFF385DNN.bigWig hg19 released low read depth, mild to moderate bottlenecking ENCFF345EIT bigWig signal p-value ENCSR085QEV ChIP-seq EFO:0002067 K562 cell line Homo sapiens NBN-human ENCAB543ANT DNA False 2016-06-14 ENCODE 1, 2 ENCFF051LWI, ENCFF262STC, ENCFF581ZJL, ENCFF948RVR 1786484803 ENCODE Processing Pipeline dbf7d6177361021ef5cbaf5f1a6b8df3 https://www.encodeproject.org/files/ENCFF345EIT/@@download/ENCFF345EIT.bigWig hg19 released low read depth, mild to moderate bottlenecking ENCFF354SEI bigWig fold change over control ENCSR085QEV ChIP-seq EFO:0002067 K562 cell line Homo sapiens NBN-human ENCAB543ANT DNA False 2016-06-14 ENCODE 1 ENCFF581ZJL, ENCFF948RVR 1065261839 ENCODE Processing Pipeline 7539c35c896694fd7249f90e7fc96a7e https://www.encodeproject.org/files/ENCFF354SEI/@@download/ENCFF354SEI.bigWig hg19 released low read depth, mild to moderate bottlenecking ENCFF516WDU bigWig fold change over control ENCSR085QEV ChIP-seq EFO:0002067 K562 cell line Homo sapiens NBN-human ENCAB543ANT DNA False 2016-06-14 ENCODE 2 ENCFF051LWI, ENCFF262STC 1286327012 ENCODE Processing Pipeline e114a5a46fb466aaa59655ff295e19db https://www.encodeproject.org/files/ENCFF516WDU/@@download/ENCFF516WDU.bigWig hg19 released low read depth, mild to moderate bottlenecking ENCFF676AOK bigWig fold change over control ENCSR085QEV ChIP-seq EFO:0002067 K562 cell line Homo sapiens NBN-human ENCAB543ANT DNA False 2016-06-14 ENCODE 1, 2 ENCFF051LWI, ENCFF262STC, ENCFF581ZJL, ENCFF948RVR 2085623723 ENCODE Processing Pipeline 876b901f287ee77faa06645623e458b0 https://www.encodeproject.org/files/ENCFF676AOK/@@download/ENCFF676AOK.bigWig hg19 released low read depth, mild to moderate bottlenecking ENCFF032UMZ bed narrowPeak peaks ENCSR085QEV ChIP-seq EFO:0002067 K562 cell line Homo sapiens NBN-human ENCAB543ANT DNA False 2016-06-14 ENCODE 1 ENCFF581ZJL, ENCFF948RVR 6940315 ENCODE Processing Pipeline 7fe98b1db8a51da117e0bb6035488924 https://www.encodeproject.org/files/ENCFF032UMZ/@@download/ENCFF032UMZ.bed.gz hg19 released low read depth, mild to moderate bottlenecking ENCFF621PYJ bigBed narrowPeak peaks ENCSR085QEV ChIP-seq EFO:0002067 K562 cell line Homo sapiens NBN-human ENCAB543ANT DNA False 2016-06-14 ENCODE 2 ENCFF021DHZ 13094065 ENCODE Processing Pipeline c19ae49d3c0a86c014a375232bc0e121 https://www.encodeproject.org/files/ENCFF621PYJ/@@download/ENCFF621PYJ.bigBed hg19 released low read depth, mild to moderate bottlenecking ENCFF266LAP bigBed narrowPeak peaks ENCSR085QEV ChIP-seq EFO:0002067 K562 cell line Homo sapiens NBN-human ENCAB543ANT DNA False 2016-06-14 ENCODE 1 ENCFF032UMZ 13013237 ENCODE Processing Pipeline dff601cfe105bfac68f74995ce535352 https://www.encodeproject.org/files/ENCFF266LAP/@@download/ENCFF266LAP.bigBed hg19 released low read depth, mild to moderate bottlenecking ENCFF650HMR bed narrowPeak peaks ENCSR085QEV ChIP-seq EFO:0002067 K562 cell line Homo sapiens NBN-human ENCAB543ANT DNA False 2016-06-14 ENCODE 1, 2 ENCFF051LWI, ENCFF262STC, ENCFF581ZJL, ENCFF948RVR 7268761 ENCODE Processing Pipeline 95bafa47f2faeff7d2d871566b7a397f https://www.encodeproject.org/files/ENCFF650HMR/@@download/ENCFF650HMR.bed.gz hg19 released low read depth, mild to moderate bottlenecking ENCFF021DHZ bed narrowPeak peaks ENCSR085QEV ChIP-seq EFO:0002067 K562 cell line Homo sapiens NBN-human ENCAB543ANT DNA False 2016-06-14 ENCODE 2 ENCFF051LWI, ENCFF262STC 7016934 ENCODE Processing Pipeline 2b207983b554dccb298e6a982558fbca https://www.encodeproject.org/files/ENCFF021DHZ/@@download/ENCFF021DHZ.bed.gz hg19 released low read depth, mild to moderate bottlenecking ENCFF437RQT bigBed narrowPeak peaks ENCSR085QEV ChIP-seq EFO:0002067 K562 cell line Homo sapiens NBN-human ENCAB543ANT DNA False 2016-06-14 ENCODE 1, 2 ENCFF650HMR 12834794 ENCODE Processing Pipeline aed7c69ed89cd64ec457b082533d3828 https://www.encodeproject.org/files/ENCFF437RQT/@@download/ENCFF437RQT.bigBed hg19 released low read depth, mild to moderate bottlenecking ENCFF732ZCF bam unfiltered alignments ENCSR085QEV ChIP-seq EFO:0002067 K562 cell line Homo sapiens NBN-human ENCAB543ANT DNA False 2016-06-14 ENCODE 1 100 ENCFF643CGH, ENCFF854CCC, ENCFF881JDL 4111759687 ENCODE Processing Pipeline 8f03eb9df7ea4f449e893773821bf5c1 https://www.encodeproject.org/files/ENCFF732ZCF/@@download/ENCFF732ZCF.bam GRCh38 released low read depth, mild to moderate bottlenecking ENCFF397LNB bam alignments ENCSR085QEV ChIP-seq EFO:0002067 K562 cell line Homo sapiens NBN-human ENCAB543ANT DNA False 2016-06-14 ENCODE 1 100 ENCFF643CGH, ENCFF854CCC, ENCFF881JDL 3349420446 ENCODE Processing Pipeline 9fc8ef3a1c0043612a0c4a9c2edba69b https://www.encodeproject.org/files/ENCFF397LNB/@@download/ENCFF397LNB.bam GRCh38 released low read depth, mild to moderate bottlenecking ENCFF106JJJ bam unfiltered alignments ENCSR085QEV ChIP-seq EFO:0002067 K562 cell line Homo sapiens NBN-human ENCAB543ANT DNA False 2016-06-14 ENCODE 2 100 ENCFF321LCC, ENCFF581MDG, ENCFF643CGH 7032936422 ENCODE Processing Pipeline 04f31424c6bedbb423bd6f79919f99a3 https://www.encodeproject.org/files/ENCFF106JJJ/@@download/ENCFF106JJJ.bam GRCh38 released low read depth, mild to moderate bottlenecking ENCFF700WSI bam alignments ENCSR085QEV ChIP-seq EFO:0002067 K562 cell line Homo sapiens NBN-human ENCAB543ANT DNA False 2016-06-14 ENCODE 2 100 ENCFF321LCC, ENCFF581MDG, ENCFF643CGH 5489300678 ENCODE Processing Pipeline 3a013ccf59abd959b6eec94e204bdddd https://www.encodeproject.org/files/ENCFF700WSI/@@download/ENCFF700WSI.bam GRCh38 released low read depth, mild to moderate bottlenecking ENCFF150WKJ bigWig signal p-value ENCSR085QEV ChIP-seq EFO:0002067 K562 cell line Homo sapiens NBN-human ENCAB543ANT DNA False 2016-06-14 ENCODE 1 ENCFF397LNB, ENCFF910IKB 1123841442 ENCODE Processing Pipeline 784d98a493fa986c94dc5457a37b2b76 https://www.encodeproject.org/files/ENCFF150WKJ/@@download/ENCFF150WKJ.bigWig GRCh38 released low read depth, mild to moderate bottlenecking ENCFF467QSK bigWig signal p-value ENCSR085QEV ChIP-seq EFO:0002067 K562 cell line Homo sapiens NBN-human ENCAB543ANT DNA False 2016-06-14 ENCODE 2 ENCFF227IZS, ENCFF700WSI 1002282786 ENCODE Processing Pipeline 00bf8398c47ea71922ea9b98a59b242c https://www.encodeproject.org/files/ENCFF467QSK/@@download/ENCFF467QSK.bigWig GRCh38 released low read depth, mild to moderate bottlenecking ENCFF043TNW bigWig signal p-value ENCSR085QEV ChIP-seq EFO:0002067 K562 cell line Homo sapiens NBN-human ENCAB543ANT DNA False 2016-06-14 ENCODE 1, 2 ENCFF227IZS, ENCFF397LNB, ENCFF700WSI, ENCFF910IKB 1889640962 ENCODE Processing Pipeline 203f4d9afcb3d8e45ea62fe1c5fd4a8a https://www.encodeproject.org/files/ENCFF043TNW/@@download/ENCFF043TNW.bigWig GRCh38 released low read depth, mild to moderate bottlenecking ENCFF782XIT bigWig fold change over control ENCSR085QEV ChIP-seq EFO:0002067 K562 cell line Homo sapiens NBN-human ENCAB543ANT DNA False 2016-06-14 ENCODE 1 ENCFF397LNB, ENCFF910IKB 1064417312 ENCODE Processing Pipeline 07a88f0d4a2788f2519ada609de55691 https://www.encodeproject.org/files/ENCFF782XIT/@@download/ENCFF782XIT.bigWig GRCh38 released low read depth, mild to moderate bottlenecking ENCFF473IIF bigWig fold change over control ENCSR085QEV ChIP-seq EFO:0002067 K562 cell line Homo sapiens NBN-human ENCAB543ANT DNA False 2016-06-14 ENCODE 2 ENCFF227IZS, ENCFF700WSI 1279555549 ENCODE Processing Pipeline 6704cab8ca6241a7db812dbf2db38a4d https://www.encodeproject.org/files/ENCFF473IIF/@@download/ENCFF473IIF.bigWig GRCh38 released low read depth, mild to moderate bottlenecking ENCFF065RHP bigWig fold change over control ENCSR085QEV ChIP-seq EFO:0002067 K562 cell line Homo sapiens NBN-human ENCAB543ANT DNA False 2016-06-14 ENCODE 1, 2 ENCFF227IZS, ENCFF397LNB, ENCFF700WSI, ENCFF910IKB 2084585240 ENCODE Processing Pipeline a189e0da007cba75e436f94701f09f94 https://www.encodeproject.org/files/ENCFF065RHP/@@download/ENCFF065RHP.bigWig GRCh38 released low read depth, mild to moderate bottlenecking ENCFF650QRE bed narrowPeak peaks ENCSR085QEV ChIP-seq EFO:0002067 K562 cell line Homo sapiens NBN-human ENCAB543ANT DNA False 2016-06-14 ENCODE 1 ENCFF397LNB, ENCFF910IKB 6801433 ENCODE Processing Pipeline 6daffeac26caf78eb938152fe8dbb664 https://www.encodeproject.org/files/ENCFF650QRE/@@download/ENCFF650QRE.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking ENCFF219QEL bed narrowPeak peaks ENCSR085QEV ChIP-seq EFO:0002067 K562 cell line Homo sapiens NBN-human ENCAB543ANT DNA False 2016-06-14 ENCODE 2 ENCFF227IZS, ENCFF700WSI 6931066 ENCODE Processing Pipeline d6e0e882359ceacc4f0c99523f8fff66 https://www.encodeproject.org/files/ENCFF219QEL/@@download/ENCFF219QEL.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking ENCFF676XEI bed narrowPeak peaks ENCSR085QEV ChIP-seq EFO:0002067 K562 cell line Homo sapiens NBN-human ENCAB543ANT DNA False 2016-06-14 ENCODE 1, 2 ENCFF227IZS, ENCFF397LNB, ENCFF700WSI, ENCFF910IKB 7247901 ENCODE Processing Pipeline 12997715425bce34a2f104788cd94e9f https://www.encodeproject.org/files/ENCFF676XEI/@@download/ENCFF676XEI.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking ENCFF633CVT bigBed narrowPeak peaks ENCSR085QEV ChIP-seq EFO:0002067 K562 cell line Homo sapiens NBN-human ENCAB543ANT DNA False 2016-06-14 ENCODE 1 ENCFF650QRE 12964783 ENCODE Processing Pipeline 09835f4263a9acf7a10438aa2b207e47 https://www.encodeproject.org/files/ENCFF633CVT/@@download/ENCFF633CVT.bigBed GRCh38 released low read depth, mild to moderate bottlenecking ENCFF355RBE bigBed narrowPeak peaks ENCSR085QEV ChIP-seq EFO:0002067 K562 cell line Homo sapiens NBN-human ENCAB543ANT DNA False 2016-06-14 ENCODE 2 ENCFF219QEL 13090586 ENCODE Processing Pipeline d58b2edfe1d293b52f92ac7d2af225b7 https://www.encodeproject.org/files/ENCFF355RBE/@@download/ENCFF355RBE.bigBed GRCh38 released low read depth, mild to moderate bottlenecking ENCFF301ASL bigBed narrowPeak peaks ENCSR085QEV ChIP-seq EFO:0002067 K562 cell line Homo sapiens NBN-human ENCAB543ANT DNA False 2016-06-14 ENCODE 1, 2 ENCFF676XEI 12824647 ENCODE Processing Pipeline 5f86a1c59c0353e6e66f8ac32bf09a89 https://www.encodeproject.org/files/ENCFF301ASL/@@download/ENCFF301ASL.bigBed GRCh38 released low read depth, mild to moderate bottlenecking ENCFF023PLP bed narrowPeak conservative idr thresholded peaks ENCSR085QEV ChIP-seq EFO:0002067 K562 cell line Homo sapiens NBN-human ENCAB543ANT DNA False 2016-06-14 ENCODE 1, 2 ENCFF219QEL, ENCFF419RSJ, ENCFF650QRE, ENCFF676XEI 258032 ENCODE Processing Pipeline 8024a88a7c27ba193731001e1ab55caa https://www.encodeproject.org/files/ENCFF023PLP/@@download/ENCFF023PLP.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking ENCFF462FUG bigBed narrowPeak conservative idr thresholded peaks ENCSR085QEV ChIP-seq EFO:0002067 K562 cell line Homo sapiens NBN-human ENCAB543ANT DNA False 2016-06-14 ENCODE 1, 2 ENCFF023PLP 554918 ENCODE Processing Pipeline 98c422823cbe9033aed2d883c5b6c757 https://www.encodeproject.org/files/ENCFF462FUG/@@download/ENCFF462FUG.bigBed GRCh38 released low read depth, mild to moderate bottlenecking ENCFF728KKP bed narrowPeak optimal idr thresholded peaks ENCSR085QEV ChIP-seq EFO:0002067 K562 cell line Homo sapiens NBN-human ENCAB543ANT DNA False 2016-06-14 ENCODE 1, 2 ENCFF219QEL, ENCFF419RSJ, ENCFF650QRE, ENCFF676XEI 383162 ENCODE Processing Pipeline 8dd1f3b760d18bb50be1a56c01c5bcf3 https://www.encodeproject.org/files/ENCFF728KKP/@@download/ENCFF728KKP.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking ENCFF062UXM bigBed narrowPeak optimal idr thresholded peaks ENCSR085QEV ChIP-seq EFO:0002067 K562 cell line Homo sapiens NBN-human ENCAB543ANT DNA False 2016-06-14 ENCODE 1, 2 ENCFF728KKP 749565 ENCODE Processing Pipeline 078d1d5c7cde1376bc6c98be1861ce8d https://www.encodeproject.org/files/ENCFF062UXM/@@download/ENCFF062UXM.bigBed GRCh38 released low read depth, mild to moderate bottlenecking ENCFF981VUX bed narrowPeak conservative idr thresholded peaks ENCSR085QEV ChIP-seq EFO:0002067 K562 cell line Homo sapiens NBN-human ENCAB543ANT DNA False 2016-06-14 ENCODE 1, 2 ENCFF001TDO, ENCFF021DHZ, ENCFF032UMZ, ENCFF650HMR 211292 ENCODE Processing Pipeline eb96ca3f7828b9ca78b44ddbe4345336 https://www.encodeproject.org/files/ENCFF981VUX/@@download/ENCFF981VUX.bed.gz hg19 released low read depth, mild to moderate bottlenecking ENCFF671VCR bigBed narrowPeak conservative idr thresholded peaks ENCSR085QEV ChIP-seq EFO:0002067 K562 cell line Homo sapiens NBN-human ENCAB543ANT DNA False 2016-06-14 ENCODE 1, 2 ENCFF981VUX 399000 ENCODE Processing Pipeline 96f18485b13878177db6af890b93ec45 https://www.encodeproject.org/files/ENCFF671VCR/@@download/ENCFF671VCR.bigBed hg19 released low read depth, mild to moderate bottlenecking ENCFF074EZL bed narrowPeak optimal idr thresholded peaks ENCSR085QEV ChIP-seq EFO:0002067 K562 cell line Homo sapiens NBN-human ENCAB543ANT DNA False 2016-06-14 ENCODE 1, 2 ENCFF001TDO, ENCFF021DHZ, ENCFF032UMZ, ENCFF650HMR 321865 ENCODE Processing Pipeline 7e52fb41f5a8121abd5a3b5a07f42747 https://www.encodeproject.org/files/ENCFF074EZL/@@download/ENCFF074EZL.bed.gz hg19 released low read depth, mild to moderate bottlenecking ENCFF546HOZ bigBed narrowPeak optimal idr thresholded peaks ENCSR085QEV ChIP-seq EFO:0002067 K562 cell line Homo sapiens NBN-human ENCAB543ANT DNA False 2016-06-14 ENCODE 1, 2 ENCFF074EZL 662278 ENCODE Processing Pipeline 322d9f882e5e24b94394d0f9b52156f3 https://www.encodeproject.org/files/ENCFF546HOZ/@@download/ENCFF546HOZ.bigBed hg19 released low read depth, mild to moderate bottlenecking ENCFF492AMG bam unfiltered alignments ENCSR145TSJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF4-human ENCAB306IYD DNA False 2018-01-26 ENCODE 2 100 ENCFF565KLI, ENCFF682IGK, ENCFF807MUK 5477981809 ENCODE Processing Pipeline 9698808c78a80f9f04b48af864d377a3 https://www.encodeproject.org/files/ENCFF492AMG/@@download/ENCFF492AMG.bam hg19 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF389CSQ bam unfiltered alignments ENCSR145TSJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF4-human ENCAB306IYD DNA False 2018-01-26 ENCODE 1 100 ENCFF069VNL, ENCFF081USS, ENCFF807MUK 4348682310 ENCODE Processing Pipeline 4e709c18caf9e3af887b2358db3d18a7 https://www.encodeproject.org/files/ENCFF389CSQ/@@download/ENCFF389CSQ.bam hg19 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF069VNL fastq reads ENCSR145TSJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF4-human ENCAB306IYD DNA False 2018-01-26 ENCODE 1 1 100 paired-ended 2 ENCFF081USS 2061983801 Michael Snyder, Stanford 1dab4e0806e875b2d9238a7b72636eab https://www.encodeproject.org/files/ENCFF069VNL/@@download/ENCFF069VNL.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFH/ released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF682IGK fastq reads ENCSR145TSJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF4-human ENCAB306IYD DNA False 2018-01-26 ENCODE 2 1 100 paired-ended 2 ENCFF565KLI 2622885479 Michael Snyder, Stanford 9cf6f5269f81a8261b9076667b8d943b https://www.encodeproject.org/files/ENCFF682IGK/@@download/ENCFF682IGK.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFA/ released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF081USS fastq reads ENCSR145TSJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF4-human ENCAB306IYD DNA False 2018-01-26 ENCODE 1 1 100 paired-ended 1 ENCFF069VNL 2034930251 Michael Snyder, Stanford f42fe9495ac96c5cfc572c0acae7ccab https://www.encodeproject.org/files/ENCFF081USS/@@download/ENCFF081USS.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFF/ released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF565KLI fastq reads ENCSR145TSJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF4-human ENCAB306IYD DNA False 2018-01-26 ENCODE 2 1 100 paired-ended 1 ENCFF682IGK 2552386998 Michael Snyder, Stanford e96488cf3d55f7bdaa12ab3e18f76618 https://www.encodeproject.org/files/ENCFF565KLI/@@download/ENCFF565KLI.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFD/ released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF676XEB bam alignments ENCSR145TSJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF4-human ENCAB306IYD DNA False 2018-01-26 ENCODE 1 100 ENCFF069VNL, ENCFF081USS, ENCFF807MUK 3466917795 ENCODE Processing Pipeline 7530e3493612f61ed9124341fb8d4702 https://www.encodeproject.org/files/ENCFF676XEB/@@download/ENCFF676XEB.bam hg19 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF258YDE bam alignments ENCSR145TSJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF4-human ENCAB306IYD DNA False 2018-01-26 ENCODE 2 100 ENCFF565KLI, ENCFF682IGK, ENCFF807MUK 4213726636 ENCODE Processing Pipeline e88dc849eb900bdefec4cfecf711cf13 https://www.encodeproject.org/files/ENCFF258YDE/@@download/ENCFF258YDE.bam hg19 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF111CNS bigWig signal p-value ENCSR145TSJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF4-human ENCAB306IYD DNA False 2018-01-26 ENCODE 1, 2 ENCFF051LWI, ENCFF258YDE, ENCFF581ZJL, ENCFF676XEB 1843905192 ENCODE Processing Pipeline 5497e0a7361d320b33ef614fe90dc5d0 https://www.encodeproject.org/files/ENCFF111CNS/@@download/ENCFF111CNS.bigWig hg19 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF703NOB bigWig fold change over control ENCSR145TSJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF4-human ENCAB306IYD DNA False 2018-01-26 ENCODE 1, 2 ENCFF051LWI, ENCFF258YDE, ENCFF581ZJL, ENCFF676XEB 2001536299 ENCODE Processing Pipeline 27147a897083d2024b6e46b786fca5b9 https://www.encodeproject.org/files/ENCFF703NOB/@@download/ENCFF703NOB.bigWig hg19 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF552SPI bam unfiltered alignments ENCSR145TSJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF4-human ENCAB306IYD DNA False 2018-01-26 ENCODE 1 100 ENCFF069VNL, ENCFF081USS, ENCFF643CGH 4352236082 ENCODE Processing Pipeline 9ce38d4fb6860565a70faacc06f21d02 https://www.encodeproject.org/files/ENCFF552SPI/@@download/ENCFF552SPI.bam GRCh38 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF933IST bam unfiltered alignments ENCSR145TSJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF4-human ENCAB306IYD DNA False 2018-01-26 ENCODE 2 100 ENCFF565KLI, ENCFF643CGH, ENCFF682IGK 5481518458 ENCODE Processing Pipeline e41e47e8d542b4e6624ad10d45b48810 https://www.encodeproject.org/files/ENCFF933IST/@@download/ENCFF933IST.bam GRCh38 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF102VJO bam alignments ENCSR145TSJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF4-human ENCAB306IYD DNA False 2018-01-26 ENCODE 1 100 ENCFF069VNL, ENCFF081USS, ENCFF643CGH 3468020208 ENCODE Processing Pipeline 2ab83cc5862ce5f119281fc4cb974ec8 https://www.encodeproject.org/files/ENCFF102VJO/@@download/ENCFF102VJO.bam GRCh38 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF313JTU bam alignments ENCSR145TSJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF4-human ENCAB306IYD DNA False 2018-01-26 ENCODE 2 100 ENCFF565KLI, ENCFF643CGH, ENCFF682IGK 4214753889 ENCODE Processing Pipeline c3141d62197520a97ef4757b432fc9bd https://www.encodeproject.org/files/ENCFF313JTU/@@download/ENCFF313JTU.bam GRCh38 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF484GNY bigWig signal p-value ENCSR145TSJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF4-human ENCAB306IYD DNA False 2018-01-26 ENCODE 1 ENCFF102VJO, ENCFF910IKB 1156537506 ENCODE Processing Pipeline 3ede18a5c544d8f90854898ef6a93008 https://www.encodeproject.org/files/ENCFF484GNY/@@download/ENCFF484GNY.bigWig GRCh38 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF742FPU bigWig signal p-value ENCSR145TSJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF4-human ENCAB306IYD DNA False 2018-01-26 ENCODE 2 ENCFF227IZS, ENCFF313JTU 1009333078 ENCODE Processing Pipeline d58d8d88fcc9c3257b1a658c5bb98ab4 https://www.encodeproject.org/files/ENCFF742FPU/@@download/ENCFF742FPU.bigWig GRCh38 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF560GZS bigWig signal p-value ENCSR145TSJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF4-human ENCAB306IYD DNA False 2018-01-26 ENCODE 1, 2 ENCFF102VJO, ENCFF227IZS, ENCFF313JTU, ENCFF910IKB 1584673058 ENCODE Processing Pipeline 12ae45915ca9e21af23bb400948275a0 https://www.encodeproject.org/files/ENCFF560GZS/@@download/ENCFF560GZS.bigWig GRCh38 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF195CWQ bigWig fold change over control ENCSR145TSJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF4-human ENCAB306IYD DNA False 2018-01-26 ENCODE 1 ENCFF102VJO, ENCFF910IKB 1071459139 ENCODE Processing Pipeline e3b8e2f84e30d35aec6b1c3033d13b79 https://www.encodeproject.org/files/ENCFF195CWQ/@@download/ENCFF195CWQ.bigWig GRCh38 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF509CGW bigWig fold change over control ENCSR145TSJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF4-human ENCAB306IYD DNA False 2018-01-26 ENCODE 2 ENCFF227IZS, ENCFF313JTU 1118611874 ENCODE Processing Pipeline f3a75f8ae41413661e2fe2577c103312 https://www.encodeproject.org/files/ENCFF509CGW/@@download/ENCFF509CGW.bigWig GRCh38 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF308UOK bigWig fold change over control ENCSR145TSJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF4-human ENCAB306IYD DNA False 2018-01-26 ENCODE 1, 2 ENCFF102VJO, ENCFF227IZS, ENCFF313JTU, ENCFF910IKB 2001931028 ENCODE Processing Pipeline 3b398203d27b760fba28a1799355a9b7 https://www.encodeproject.org/files/ENCFF308UOK/@@download/ENCFF308UOK.bigWig GRCh38 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF872NFM bed narrowPeak peaks ENCSR145TSJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF4-human ENCAB306IYD DNA False 2018-01-26 ENCODE 1 ENCFF102VJO, ENCFF910IKB 6732632 ENCODE Processing Pipeline c4d1b882f3b78a9750ed95bc919e74c8 https://www.encodeproject.org/files/ENCFF872NFM/@@download/ENCFF872NFM.bed.gz GRCh38 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF827GWN bed narrowPeak peaks ENCSR145TSJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF4-human ENCAB306IYD DNA False 2018-01-26 ENCODE 2 ENCFF227IZS, ENCFF313JTU 6985590 ENCODE Processing Pipeline dce69541ea66280103054d87e829963e https://www.encodeproject.org/files/ENCFF827GWN/@@download/ENCFF827GWN.bed.gz GRCh38 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF271QTZ bed narrowPeak peaks ENCSR145TSJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF4-human ENCAB306IYD DNA False 2018-01-26 ENCODE 1, 2 ENCFF102VJO, ENCFF227IZS, ENCFF313JTU, ENCFF910IKB 7245087 ENCODE Processing Pipeline a329607dcb29ab32abada97e7b83820c https://www.encodeproject.org/files/ENCFF271QTZ/@@download/ENCFF271QTZ.bed.gz GRCh38 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF903FJS bigBed narrowPeak peaks ENCSR145TSJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF4-human ENCAB306IYD DNA False 2018-01-26 ENCODE 1 ENCFF872NFM 13612340 ENCODE Processing Pipeline d10ce4f2d757eea923b1eabbd4ad0049 https://www.encodeproject.org/files/ENCFF903FJS/@@download/ENCFF903FJS.bigBed GRCh38 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF806FBL bigBed narrowPeak peaks ENCSR145TSJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF4-human ENCAB306IYD DNA False 2018-01-26 ENCODE 2 ENCFF827GWN 13353680 ENCODE Processing Pipeline fc2a90b511166c92812f580f8e792f91 https://www.encodeproject.org/files/ENCFF806FBL/@@download/ENCFF806FBL.bigBed GRCh38 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF336QRA bigBed narrowPeak peaks ENCSR145TSJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF4-human ENCAB306IYD DNA False 2018-01-26 ENCODE 1, 2 ENCFF271QTZ 13628042 ENCODE Processing Pipeline 0aaf6159738239c4760c94f1c62ae465 https://www.encodeproject.org/files/ENCFF336QRA/@@download/ENCFF336QRA.bigBed GRCh38 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF771LVW bed narrowPeak conservative idr thresholded peaks ENCSR145TSJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF4-human ENCAB306IYD DNA False 2018-01-26 ENCODE 1, 2 ENCFF271QTZ, ENCFF419RSJ, ENCFF827GWN, ENCFF872NFM 669929 ENCODE Processing Pipeline 386295fbc82dde319150f304741c8fce https://www.encodeproject.org/files/ENCFF771LVW/@@download/ENCFF771LVW.bed.gz GRCh38 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF065FSR bigBed narrowPeak conservative idr thresholded peaks ENCSR145TSJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF4-human ENCAB306IYD DNA False 2018-01-26 ENCODE 1, 2 ENCFF771LVW 1454054 ENCODE Processing Pipeline e4cd4e08e3755173f89081341e136a88 https://www.encodeproject.org/files/ENCFF065FSR/@@download/ENCFF065FSR.bigBed GRCh38 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF182MNO bed narrowPeak optimal idr thresholded peaks ENCSR145TSJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF4-human ENCAB306IYD DNA False 2018-01-26 ENCODE 1, 2 ENCFF271QTZ, ENCFF419RSJ, ENCFF827GWN, ENCFF872NFM 753608 ENCODE Processing Pipeline 62346989db6fe72bd2f91d3dc4ab8251 https://www.encodeproject.org/files/ENCFF182MNO/@@download/ENCFF182MNO.bed.gz GRCh38 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF719PKP bigBed narrowPeak optimal idr thresholded peaks ENCSR145TSJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF4-human ENCAB306IYD DNA False 2018-01-26 ENCODE 1, 2 ENCFF182MNO 1590730 ENCODE Processing Pipeline 52aecf64314b592e705cb6e43cdde33c https://www.encodeproject.org/files/ENCFF719PKP/@@download/ENCFF719PKP.bigBed GRCh38 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF667AIA bigWig signal p-value ENCSR145TSJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF4-human ENCAB306IYD DNA False 2018-01-26 ENCODE 1 ENCFF581ZJL, ENCFF676XEB 1066698457 ENCODE Processing Pipeline e9f2119230b3a99c53fa57835ec2def0 https://www.encodeproject.org/files/ENCFF667AIA/@@download/ENCFF667AIA.bigWig hg19 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF104XHY bigWig fold change over control ENCSR145TSJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF4-human ENCAB306IYD DNA False 2018-01-26 ENCODE 1 ENCFF581ZJL, ENCFF676XEB 1073415000 ENCODE Processing Pipeline cba7938a87e22ad0a4adb01edacaf7b5 https://www.encodeproject.org/files/ENCFF104XHY/@@download/ENCFF104XHY.bigWig hg19 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF079QLM bigWig signal p-value ENCSR145TSJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF4-human ENCAB306IYD DNA False 2018-01-26 ENCODE 2 ENCFF051LWI, ENCFF258YDE 1120829601 ENCODE Processing Pipeline 73b72954725789fec8bc88d454257e12 https://www.encodeproject.org/files/ENCFF079QLM/@@download/ENCFF079QLM.bigWig hg19 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF113DJG bigWig fold change over control ENCSR145TSJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF4-human ENCAB306IYD DNA False 2018-01-26 ENCODE 2 ENCFF051LWI, ENCFF258YDE 1117967331 ENCODE Processing Pipeline 21b2097a709ddd2cd093c034fe11181d https://www.encodeproject.org/files/ENCFF113DJG/@@download/ENCFF113DJG.bigWig hg19 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF391MYD bigBed narrowPeak peaks ENCSR145TSJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF4-human ENCAB306IYD DNA False 2018-01-26 ENCODE 1, 2 ENCFF921XMX 13616988 ENCODE Processing Pipeline 4da71ad02c334c4934ac6996cd65bfe1 https://www.encodeproject.org/files/ENCFF391MYD/@@download/ENCFF391MYD.bigBed hg19 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF921XMX bed narrowPeak peaks ENCSR145TSJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF4-human ENCAB306IYD DNA False 2018-01-26 ENCODE 1, 2 ENCFF051LWI, ENCFF258YDE, ENCFF581ZJL, ENCFF676XEB 7239819 ENCODE Processing Pipeline 7723316ad3320154f372a4bf52e89296 https://www.encodeproject.org/files/ENCFF921XMX/@@download/ENCFF921XMX.bed.gz hg19 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF194ITG bigBed narrowPeak peaks ENCSR145TSJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF4-human ENCAB306IYD DNA False 2018-01-26 ENCODE 1 ENCFF548UHD 13680493 ENCODE Processing Pipeline 32044e50980d29993b5dc059ff3d1380 https://www.encodeproject.org/files/ENCFF194ITG/@@download/ENCFF194ITG.bigBed hg19 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF491DNM bed narrowPeak conservative idr thresholded peaks ENCSR145TSJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF4-human ENCAB306IYD DNA False 2018-01-26 ENCODE 1, 2 ENCFF001TDO, ENCFF548UHD, ENCFF921XMX, ENCFF970NGB 667035 ENCODE Processing Pipeline c3c71c57616b074751381f76028d805f https://www.encodeproject.org/files/ENCFF491DNM/@@download/ENCFF491DNM.bed.gz hg19 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF548UHD bed narrowPeak peaks ENCSR145TSJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF4-human ENCAB306IYD DNA False 2018-01-26 ENCODE 1 ENCFF581ZJL, ENCFF676XEB 6799104 ENCODE Processing Pipeline e68b977e6644a4f73fac05bed4c8dc48 https://www.encodeproject.org/files/ENCFF548UHD/@@download/ENCFF548UHD.bed.gz hg19 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF786NCN bigBed narrowPeak peaks ENCSR145TSJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF4-human ENCAB306IYD DNA False 2018-01-26 ENCODE 2 ENCFF970NGB 13377483 ENCODE Processing Pipeline 7868b99d9b5a049854bff33c94378512 https://www.encodeproject.org/files/ENCFF786NCN/@@download/ENCFF786NCN.bigBed hg19 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF710IEF bed narrowPeak optimal idr thresholded peaks ENCSR145TSJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF4-human ENCAB306IYD DNA False 2018-01-26 ENCODE 1, 2 ENCFF001TDO, ENCFF548UHD, ENCFF921XMX, ENCFF970NGB 764540 ENCODE Processing Pipeline e9766301d4959d4c2c900a42e3e9c2d2 https://www.encodeproject.org/files/ENCFF710IEF/@@download/ENCFF710IEF.bed.gz hg19 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF970NGB bed narrowPeak peaks ENCSR145TSJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF4-human ENCAB306IYD DNA False 2018-01-26 ENCODE 2 ENCFF051LWI, ENCFF258YDE 7015068 ENCODE Processing Pipeline 08c59c7cf79bbb2336108666f30034c4 https://www.encodeproject.org/files/ENCFF970NGB/@@download/ENCFF970NGB.bed.gz hg19 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF335HBO bigBed narrowPeak conservative idr thresholded peaks ENCSR145TSJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF4-human ENCAB306IYD DNA False 2018-01-26 ENCODE 1, 2 ENCFF491DNM 1446404 ENCODE Processing Pipeline d6571dbba2abbd032f987bb53d5682e4 https://www.encodeproject.org/files/ENCFF335HBO/@@download/ENCFF335HBO.bigBed hg19 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF881VCR bigBed narrowPeak optimal idr thresholded peaks ENCSR145TSJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens ATF4-human ENCAB306IYD DNA False 2018-01-26 ENCODE 1, 2 ENCFF710IEF 1604210 ENCODE Processing Pipeline 3beef78b46c46b85617718cdaf32df84 https://www.encodeproject.org/files/ENCFF881VCR/@@download/ENCFF881VCR.bigBed hg19 released mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF443EYQ bam unfiltered alignments ENCSR426MDV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MIER1-human ENCAB956LLD DNA False 2016-06-14 ENCODE 1 100 ENCFF060OGJ, ENCFF391PZV, ENCFF807MUK 7336900303 ENCODE Processing Pipeline 53f91ec835feeb7e481c5d39f1d9aa86 https://www.encodeproject.org/files/ENCFF443EYQ/@@download/ENCFF443EYQ.bam hg19 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption ENCFF871NXR bam unfiltered alignments ENCSR426MDV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MIER1-human ENCAB956LLD DNA False 2016-06-14 ENCODE 2 100 ENCFF612DVW, ENCFF807MUK, ENCFF910KPS 3717412662 ENCODE Processing Pipeline 82c2701ff341c7f97e8c7e60aac99482 https://www.encodeproject.org/files/ENCFF871NXR/@@download/ENCFF871NXR.bam hg19 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption ENCFF060OGJ fastq reads ENCSR426MDV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MIER1-human ENCAB956LLD DNA False 2016-06-14 ENCODE 1 1 100 paired-ended 2 ENCFF391PZV 3497475777 Michael Snyder, Stanford 3146c59a4d349806636f6d9dbd24e893 SRA:SRR5111584 https://www.encodeproject.org/files/ENCFF060OGJ/@@download/ENCFF060OGJ.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFH/ released low read depth, mild to moderate bottlenecking, antibody characterized with exemption ENCFF391PZV fastq reads ENCSR426MDV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MIER1-human ENCAB956LLD DNA False 2016-06-14 ENCODE 1 1 100 paired-ended 1 ENCFF060OGJ 3443904663 Michael Snyder, Stanford 67abfae30a100eaa1f36b2df64076c0f SRA:SRR5111584 https://www.encodeproject.org/files/ENCFF391PZV/@@download/ENCFF391PZV.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFF/ released low read depth, mild to moderate bottlenecking, antibody characterized with exemption ENCFF910KPS fastq reads ENCSR426MDV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MIER1-human ENCAB956LLD DNA False 2016-06-14 ENCODE 2 1 100 paired-ended 1 ENCFF612DVW 1673360585 Michael Snyder, Stanford 9e0442395ec277b4dd9e6a1af10b73ba SRA:SRR5111583 https://www.encodeproject.org/files/ENCFF910KPS/@@download/ENCFF910KPS.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFD/ released low read depth, mild to moderate bottlenecking, antibody characterized with exemption ENCFF612DVW fastq reads ENCSR426MDV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MIER1-human ENCAB956LLD DNA False 2016-06-14 ENCODE 2 1 100 paired-ended 2 ENCFF910KPS 1703507834 Michael Snyder, Stanford e5e98c7d402686d386d06f63d8887bc2 SRA:SRR5111583 https://www.encodeproject.org/files/ENCFF612DVW/@@download/ENCFF612DVW.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFA/ released low read depth, mild to moderate bottlenecking, antibody characterized with exemption ENCFF465ENL bam alignments ENCSR426MDV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MIER1-human ENCAB956LLD DNA False 2016-06-14 ENCODE 2 100 ENCFF612DVW, ENCFF807MUK, ENCFF910KPS 3044517214 ENCODE Processing Pipeline 52ca06441c844be5f3d9832c2bd788c0 https://www.encodeproject.org/files/ENCFF465ENL/@@download/ENCFF465ENL.bam hg19 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption ENCFF042HRP bam alignments ENCSR426MDV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MIER1-human ENCAB956LLD DNA False 2016-06-14 ENCODE 1 100 ENCFF060OGJ, ENCFF391PZV, ENCFF807MUK 6064401763 ENCODE Processing Pipeline 9403ffff238deb12aee5af704db9fcc8 https://www.encodeproject.org/files/ENCFF042HRP/@@download/ENCFF042HRP.bam hg19 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption ENCFF130UJM bigWig signal p-value ENCSR426MDV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MIER1-human ENCAB956LLD DNA False 2016-06-14 ENCODE 1 ENCFF042HRP, ENCFF581ZJL 1283753356 ENCODE Processing Pipeline b7d43d6c829c20626c241e056a0780b0 https://www.encodeproject.org/files/ENCFF130UJM/@@download/ENCFF130UJM.bigWig hg19 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption ENCFF040ZZO bigWig signal p-value ENCSR426MDV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MIER1-human ENCAB956LLD DNA False 2016-06-14 ENCODE 2 ENCFF051LWI, ENCFF465ENL 1016109033 ENCODE Processing Pipeline 995b1bff7953d77cb78d07c0f7c12e1e https://www.encodeproject.org/files/ENCFF040ZZO/@@download/ENCFF040ZZO.bigWig hg19 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption ENCFF338EDO bigWig signal p-value ENCSR426MDV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MIER1-human ENCAB956LLD DNA False 2016-06-14 ENCODE 1, 2 ENCFF042HRP, ENCFF051LWI, ENCFF465ENL, ENCFF581ZJL 1796078395 ENCODE Processing Pipeline de02dbc8c001d4a8b1b169da476d4691 https://www.encodeproject.org/files/ENCFF338EDO/@@download/ENCFF338EDO.bigWig hg19 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption ENCFF574QCU bigWig fold change over control ENCSR426MDV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MIER1-human ENCAB956LLD DNA False 2016-06-14 ENCODE 1 ENCFF042HRP, ENCFF581ZJL 1540800076 ENCODE Processing Pipeline 7ab730a460653aebc8db45c567a1984b https://www.encodeproject.org/files/ENCFF574QCU/@@download/ENCFF574QCU.bigWig hg19 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption ENCFF702LLJ bigWig fold change over control ENCSR426MDV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MIER1-human ENCAB956LLD DNA False 2016-06-14 ENCODE 2 ENCFF051LWI, ENCFF465ENL 981980701 ENCODE Processing Pipeline 61af5d5f1464adb6118c3877dbdf2d0f https://www.encodeproject.org/files/ENCFF702LLJ/@@download/ENCFF702LLJ.bigWig hg19 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption ENCFF332DMO bigWig fold change over control ENCSR426MDV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MIER1-human ENCAB956LLD DNA False 2016-06-14 ENCODE 1, 2 ENCFF042HRP, ENCFF051LWI, ENCFF465ENL, ENCFF581ZJL 2229710421 ENCODE Processing Pipeline 6a7c431869a2446a6ddc25d19741972f https://www.encodeproject.org/files/ENCFF332DMO/@@download/ENCFF332DMO.bigWig hg19 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption ENCFF438RUW bed narrowPeak peaks ENCSR426MDV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MIER1-human ENCAB956LLD DNA False 2016-06-14 ENCODE 1 ENCFF042HRP, ENCFF581ZJL 7190369 ENCODE Processing Pipeline 29979f3a75ae2c25cf3e69c12045ab0c https://www.encodeproject.org/files/ENCFF438RUW/@@download/ENCFF438RUW.bed.gz hg19 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption ENCFF601IZU bed narrowPeak peaks ENCSR426MDV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MIER1-human ENCAB956LLD DNA False 2016-06-14 ENCODE 1, 2 ENCFF042HRP, ENCFF051LWI, ENCFF465ENL, ENCFF581ZJL 7275622 ENCODE Processing Pipeline b5cf75c692c3f8c8a6ecae96896aa146 https://www.encodeproject.org/files/ENCFF601IZU/@@download/ENCFF601IZU.bed.gz hg19 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption ENCFF034WZF bigBed narrowPeak peaks ENCSR426MDV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MIER1-human ENCAB956LLD DNA False 2016-06-14 ENCODE 1, 2 ENCFF601IZU 12853251 ENCODE Processing Pipeline 13c22f1b3d0fbd9a87d5680f105d5c43 https://www.encodeproject.org/files/ENCFF034WZF/@@download/ENCFF034WZF.bigBed hg19 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption ENCFF648JAT bed narrowPeak peaks ENCSR426MDV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MIER1-human ENCAB956LLD DNA False 2016-06-14 ENCODE 2 ENCFF051LWI, ENCFF465ENL 6825636 ENCODE Processing Pipeline 573107bfc0e8e29ef5b25a41ef1594c0 https://www.encodeproject.org/files/ENCFF648JAT/@@download/ENCFF648JAT.bed.gz hg19 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption ENCFF842XCE bigBed narrowPeak peaks ENCSR426MDV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MIER1-human ENCAB956LLD DNA False 2016-06-14 ENCODE 2 ENCFF648JAT 13121603 ENCODE Processing Pipeline dce94bc1ace2f4003ec433703cab0f45 https://www.encodeproject.org/files/ENCFF842XCE/@@download/ENCFF842XCE.bigBed hg19 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption ENCFF333MZV bigBed narrowPeak peaks ENCSR426MDV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MIER1-human ENCAB956LLD DNA False 2016-06-14 ENCODE 1 ENCFF438RUW 12976601 ENCODE Processing Pipeline 5dddc7e80f27f3444b5f41e6ae150e43 https://www.encodeproject.org/files/ENCFF333MZV/@@download/ENCFF333MZV.bigBed hg19 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption ENCFF722EKW bam unfiltered alignments ENCSR426MDV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MIER1-human ENCAB956LLD DNA False 2016-06-14 ENCODE 2 100 ENCFF612DVW, ENCFF643CGH, ENCFF910KPS 3720026845 ENCODE Processing Pipeline 4d643560c9d73d7011ec3338ae583a8b https://www.encodeproject.org/files/ENCFF722EKW/@@download/ENCFF722EKW.bam GRCh38 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption ENCFF940ZRQ bam unfiltered alignments ENCSR426MDV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MIER1-human ENCAB956LLD DNA False 2016-06-14 ENCODE 1 100 ENCFF060OGJ, ENCFF391PZV, ENCFF643CGH 7343967518 ENCODE Processing Pipeline 1ec8da0d50e26fbf34d544f217a12974 https://www.encodeproject.org/files/ENCFF940ZRQ/@@download/ENCFF940ZRQ.bam GRCh38 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption ENCFF639CLN bam alignments ENCSR426MDV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MIER1-human ENCAB956LLD DNA False 2016-06-14 ENCODE 2 100 ENCFF612DVW, ENCFF643CGH, ENCFF910KPS 3045973174 ENCODE Processing Pipeline 04ed141468c9d3cf4a33149f401ec68c https://www.encodeproject.org/files/ENCFF639CLN/@@download/ENCFF639CLN.bam GRCh38 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption ENCFF682OCC bam alignments ENCSR426MDV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MIER1-human ENCAB956LLD DNA False 2016-06-14 ENCODE 1 100 ENCFF060OGJ, ENCFF391PZV, ENCFF643CGH 6068733754 ENCODE Processing Pipeline 4e1aecd5e88a1af79218478329cceb37 https://www.encodeproject.org/files/ENCFF682OCC/@@download/ENCFF682OCC.bam GRCh38 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption ENCFF657WIT bigWig signal p-value ENCSR426MDV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MIER1-human ENCAB956LLD DNA False 2016-06-14 ENCODE 1 ENCFF682OCC, ENCFF910IKB 1289834504 ENCODE Processing Pipeline aa2f52a5c20f2807aab6eb7b0da58ccb https://www.encodeproject.org/files/ENCFF657WIT/@@download/ENCFF657WIT.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption ENCFF774XUB bigWig signal p-value ENCSR426MDV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MIER1-human ENCAB956LLD DNA False 2016-06-14 ENCODE 2 ENCFF227IZS, ENCFF639CLN 1046476991 ENCODE Processing Pipeline 034ca6133ba9ed3b9facc8847179f91e https://www.encodeproject.org/files/ENCFF774XUB/@@download/ENCFF774XUB.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption ENCFF987YJV bigWig signal p-value ENCSR426MDV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MIER1-human ENCAB956LLD DNA False 2016-06-14 ENCODE 1, 2 ENCFF227IZS, ENCFF639CLN, ENCFF682OCC, ENCFF910IKB 1808253610 ENCODE Processing Pipeline 8ed6334f9813a8ca29e6988ff0adfe4c https://www.encodeproject.org/files/ENCFF987YJV/@@download/ENCFF987YJV.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption ENCFF881YVF bigWig fold change over control ENCSR426MDV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MIER1-human ENCAB956LLD DNA False 2016-06-14 ENCODE 1 ENCFF682OCC, ENCFF910IKB 1542437913 ENCODE Processing Pipeline 9ba200c4d1cb693c24f909fa1a1e7db1 https://www.encodeproject.org/files/ENCFF881YVF/@@download/ENCFF881YVF.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption ENCFF309PZN bigWig fold change over control ENCSR426MDV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MIER1-human ENCAB956LLD DNA False 2016-06-14 ENCODE 2 ENCFF227IZS, ENCFF639CLN 983930122 ENCODE Processing Pipeline 176d4154bf944622be3986930597a3b5 https://www.encodeproject.org/files/ENCFF309PZN/@@download/ENCFF309PZN.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption ENCFF406QJG bigWig fold change over control ENCSR426MDV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MIER1-human ENCAB956LLD DNA False 2016-06-14 ENCODE 1, 2 ENCFF227IZS, ENCFF639CLN, ENCFF682OCC, ENCFF910IKB 2210228359 ENCODE Processing Pipeline 68ac661eea141c2db48ad487f213b2f4 https://www.encodeproject.org/files/ENCFF406QJG/@@download/ENCFF406QJG.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption ENCFF949HEL bed narrowPeak peaks ENCSR426MDV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MIER1-human ENCAB956LLD DNA False 2016-06-14 ENCODE 1 ENCFF682OCC, ENCFF910IKB 7150016 ENCODE Processing Pipeline 41f6f260225cf2a2cb3f73d4e8965429 https://www.encodeproject.org/files/ENCFF949HEL/@@download/ENCFF949HEL.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption ENCFF991PXQ bed narrowPeak peaks ENCSR426MDV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MIER1-human ENCAB956LLD DNA False 2016-06-14 ENCODE 2 ENCFF227IZS, ENCFF639CLN 6726180 ENCODE Processing Pipeline 93f78692efaca8138b2e133a8c199266 https://www.encodeproject.org/files/ENCFF991PXQ/@@download/ENCFF991PXQ.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption ENCFF318JNW bed narrowPeak peaks ENCSR426MDV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MIER1-human ENCAB956LLD DNA False 2016-06-14 ENCODE 1, 2 ENCFF227IZS, ENCFF639CLN, ENCFF682OCC, ENCFF910IKB 7271574 ENCODE Processing Pipeline 11cffb5a9615064667a373e7bea3de88 https://www.encodeproject.org/files/ENCFF318JNW/@@download/ENCFF318JNW.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption ENCFF396JJK bigBed narrowPeak peaks ENCSR426MDV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MIER1-human ENCAB956LLD DNA False 2016-06-14 ENCODE 1 ENCFF949HEL 12983443 ENCODE Processing Pipeline 67289bd26f44c65bfea547e60249743a https://www.encodeproject.org/files/ENCFF396JJK/@@download/ENCFF396JJK.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption ENCFF393HMQ bigBed narrowPeak peaks ENCSR426MDV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MIER1-human ENCAB956LLD DNA False 2016-06-14 ENCODE 2 ENCFF991PXQ 13127316 ENCODE Processing Pipeline e7fa3afd5e1410583f7a8695aae15e75 https://www.encodeproject.org/files/ENCFF393HMQ/@@download/ENCFF393HMQ.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption ENCFF549LDQ bigBed narrowPeak peaks ENCSR426MDV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MIER1-human ENCAB956LLD DNA False 2016-06-14 ENCODE 1, 2 ENCFF318JNW 12855767 ENCODE Processing Pipeline c9e71adf6d438a6a328eb93e122bcacb https://www.encodeproject.org/files/ENCFF549LDQ/@@download/ENCFF549LDQ.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption ENCFF710ZFM bed narrowPeak conservative idr thresholded peaks ENCSR426MDV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MIER1-human ENCAB956LLD DNA False 2016-06-14 ENCODE 1, 2 ENCFF318JNW, ENCFF419RSJ, ENCFF949HEL, ENCFF991PXQ 135199 ENCODE Processing Pipeline db2e5731edcb19bb8ed3dbabc8c35cba https://www.encodeproject.org/files/ENCFF710ZFM/@@download/ENCFF710ZFM.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption ENCFF499LTC bigBed narrowPeak conservative idr thresholded peaks ENCSR426MDV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MIER1-human ENCAB956LLD DNA False 2016-06-14 ENCODE 1, 2 ENCFF710ZFM 352131 ENCODE Processing Pipeline fbfbd7d4866cd141b56cf3bf9985d7ad https://www.encodeproject.org/files/ENCFF499LTC/@@download/ENCFF499LTC.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption ENCFF163YZB bed narrowPeak optimal idr thresholded peaks ENCSR426MDV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MIER1-human ENCAB956LLD DNA False 2016-06-14 ENCODE 1, 2 ENCFF318JNW, ENCFF419RSJ, ENCFF949HEL, ENCFF991PXQ 187646 ENCODE Processing Pipeline 7852cd66283e8e5a48b2b02aaece67e0 https://www.encodeproject.org/files/ENCFF163YZB/@@download/ENCFF163YZB.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption ENCFF169TUC bigBed narrowPeak optimal idr thresholded peaks ENCSR426MDV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MIER1-human ENCAB956LLD DNA False 2016-06-14 ENCODE 1, 2 ENCFF163YZB 442409 ENCODE Processing Pipeline 69a0f01acba78d2f2313bc4aed1ed887 https://www.encodeproject.org/files/ENCFF169TUC/@@download/ENCFF169TUC.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption ENCFF945LXQ bed narrowPeak conservative idr thresholded peaks ENCSR426MDV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MIER1-human ENCAB956LLD DNA False 2016-06-14 ENCODE 1, 2 ENCFF001TDO, ENCFF438RUW, ENCFF601IZU, ENCFF648JAT 107428 ENCODE Processing Pipeline 74dff9470dbcc23c534e9a72e1717c2c https://www.encodeproject.org/files/ENCFF945LXQ/@@download/ENCFF945LXQ.bed.gz hg19 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption ENCFF206GHG bigBed narrowPeak optimal idr thresholded peaks ENCSR426MDV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MIER1-human ENCAB956LLD DNA False 2016-06-14 ENCODE 1, 2 ENCFF365NKO 316984 ENCODE Processing Pipeline 8cc00cf4053eb00c20a5775455113d33 https://www.encodeproject.org/files/ENCFF206GHG/@@download/ENCFF206GHG.bigBed hg19 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption ENCFF937CUB bigBed narrowPeak conservative idr thresholded peaks ENCSR426MDV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MIER1-human ENCAB956LLD DNA False 2016-06-14 ENCODE 1, 2 ENCFF945LXQ 257349 ENCODE Processing Pipeline 293c9e8dd76091be381854eb0d969be9 https://www.encodeproject.org/files/ENCFF937CUB/@@download/ENCFF937CUB.bigBed hg19 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption ENCFF365NKO bed narrowPeak optimal idr thresholded peaks ENCSR426MDV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MIER1-human ENCAB956LLD DNA False 2016-06-14 ENCODE 1, 2 ENCFF001TDO, ENCFF438RUW, ENCFF601IZU, ENCFF648JAT 150984 ENCODE Processing Pipeline 76edeea358cea581c91fbf496c434e0a https://www.encodeproject.org/files/ENCFF365NKO/@@download/ENCFF365NKO.bed.gz hg19 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption ENCFF000ZDX bam alignments ENCSR000EGP ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF143-human ENCAB000AMR DNA see document see document False 2011-10-29 ENCODE 2 1 485620606 Michael Snyder, Stanford 6d76cacc56d108a04980d30d19cf1388 https://www.encodeproject.org/files/ENCFF000ZDX/@@download/ENCFF000ZDX.bam hg19 archived low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample, missing derived_from ENCFF000ZDY bigBed narrowPeak peaks ENCSR000EGP ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF143-human ENCAB000AMR DNA see document see document False 2011-10-29 ENCODE ENCFF001VPL 2748675 Michael Snyder, Stanford b8c3662e51e27e3c20bc59e88eb8cbea https://www.encodeproject.org/files/ENCFF000ZDY/@@download/ENCFF000ZDY.bigBed hg19 archived low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF000ZDZ bam alignments ENCSR000EGP ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF143-human ENCAB000AMR DNA see document see document False 2011-10-29 ENCODE 1 1 651130651 Michael Snyder, Stanford 718c81480ffb5e40f1fa81c1d8eed7de https://www.encodeproject.org/files/ENCFF000ZDZ/@@download/ENCFF000ZDZ.bam hg19 archived low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample, missing derived_from ENCFF000ZEA fastq reads ENCSR000EGP ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF143-human ENCAB000AMR DNA see document see document False 2011-10-29 ENCODE 1 1 36 single-ended 1480951873 Michael Snyder, Stanford db7f875d9c9469b01777565980897b9d https://www.encodeproject.org/files/ENCFF000ZEA/@@download/ENCFF000ZEA.fastq.gz Illumina Genome Analyzer /files/ENCFF000YRB/ released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF000ZEC fastq reads ENCSR000EGP ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF143-human ENCAB000AMR DNA see document see document False 2011-10-29 ENCODE 2 1 36 single-ended 1032301049 Michael Snyder, Stanford 7edcb2e487ad6524c11ad3c344620ffd https://www.encodeproject.org/files/ENCFF000ZEC/@@download/ENCFF000ZEC.fastq.gz Illumina Genome Analyzer /files/ENCFF000YRB/ released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF000ZEE bigWig signal ENCSR000EGP ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF143-human ENCAB000AMR DNA see document see document False 2011-10-29 ENCODE 425147325 Michael Snyder, Stanford 2ca049e6d00939692fe80fbf1ff1fa9e https://www.encodeproject.org/files/ENCFF000ZEE/@@download/ENCFF000ZEE.bigWig hg19 archived low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample, missing derived_from ENCFF001VPL bed narrowPeak peaks ENCSR000EGP ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF143-human ENCAB000AMR DNA see document see document False 2011-10-29 ENCODE 1294981 Michael Snyder, Stanford 259dc65d0d017eadee8cce89dddddf24 https://www.encodeproject.org/files/ENCFF001VPL/@@download/ENCFF001VPL.bed.gz hg19 archived low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample, missing derived_from ENCFF002CYR bed narrowPeak optimal idr thresholded peaks ENCSR000EGP ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF143-human ENCAB000AMR DNA see document see document False 2011-10-29 ENCODE 686281 ENCODE Consortium Analysis Working Group 0a9d8e90c7bf4abb3e7a2e3320eba6b3 https://www.encodeproject.org/files/ENCFF002CYR/@@download/ENCFF002CYR.bed.gz hg19 archived low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample, missing derived_from ENCFF432JDP bigBed narrowPeak optimal idr thresholded peaks ENCSR000EGP ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF143-human ENCAB000AMR DNA see document see document False 2011-10-29 ENCODE ENCFF002CYR 1531798 ENCODE Consortium e0f65a162a444716edb04d42be3b79b5 https://www.encodeproject.org/files/ENCFF432JDP/@@download/ENCFF432JDP.bigBed hg19 archived low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF682XGC bam alignments ENCSR000EGP ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF143-human ENCAB000AMR DNA see document see document False 2011-10-29 ENCODE 2 36 ENCFF000ZEC, ENCFF643CGH 787162278 ENCODE Processing Pipeline af150cb077cc0dc0bde92850b6358a02 https://www.encodeproject.org/files/ENCFF682XGC/@@download/ENCFF682XGC.bam GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF519ADB bam unfiltered alignments ENCSR000EGP ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF143-human ENCAB000AMR DNA see document see document False 2011-10-29 ENCODE 2 36 ENCFF000ZEC, ENCFF643CGH 1154143165 ENCODE Processing Pipeline 9eab1350b1160c716f79245bccb64798 https://www.encodeproject.org/files/ENCFF519ADB/@@download/ENCFF519ADB.bam GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF107KAO bam unfiltered alignments ENCSR000EGP ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF143-human ENCAB000AMR DNA see document see document False 2011-10-29 ENCODE 1 36 ENCFF000ZEA, ENCFF643CGH 1666353739 ENCODE Processing Pipeline 1d5e64c033affbb6dbf72d8976709484 https://www.encodeproject.org/files/ENCFF107KAO/@@download/ENCFF107KAO.bam GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF975ZXB bam alignments ENCSR000EGP ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF143-human ENCAB000AMR DNA see document see document False 2011-10-29 ENCODE 1 36 ENCFF000ZEA, ENCFF643CGH 1163632893 ENCODE Processing Pipeline 7b84762e044235d41aea79208dd53b9e https://www.encodeproject.org/files/ENCFF975ZXB/@@download/ENCFF975ZXB.bam GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF095BUY bam unfiltered alignments ENCSR000EGP ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF143-human ENCAB000AMR DNA see document see document False 2011-10-29 ENCODE 2 36 ENCFF000ZEC, ENCFF807MUK 1149539744 ENCODE Processing Pipeline 09c6098e39e7bb21a27e9df802f84e6e https://www.encodeproject.org/files/ENCFF095BUY/@@download/ENCFF095BUY.bam hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF872IPB bam alignments ENCSR000EGP ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF143-human ENCAB000AMR DNA see document see document False 2011-10-29 ENCODE 2 36 ENCFF000ZEC, ENCFF807MUK 787717478 ENCODE Processing Pipeline 99e7ee2437bc916119657c3ae534af46 https://www.encodeproject.org/files/ENCFF872IPB/@@download/ENCFF872IPB.bam hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF701HQG bam unfiltered alignments ENCSR000EGP ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF143-human ENCAB000AMR DNA see document see document False 2011-10-29 ENCODE 1 36 ENCFF000ZEA, ENCFF807MUK 1660125991 ENCODE Processing Pipeline c7d64089fe6ed77324cc744de3233a2a https://www.encodeproject.org/files/ENCFF701HQG/@@download/ENCFF701HQG.bam hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF347FTA bam alignments ENCSR000EGP ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF143-human ENCAB000AMR DNA see document see document False 2011-10-29 ENCODE 1 36 ENCFF000ZEA, ENCFF807MUK 1164317195 ENCODE Processing Pipeline 86c24af8e5400c15bfcd0cdc25472ccb https://www.encodeproject.org/files/ENCFF347FTA/@@download/ENCFF347FTA.bam hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF327TQA bigWig signal p-value ENCSR000EGP ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF143-human ENCAB000AMR DNA see document see document False 2011-10-29 ENCODE 2 ENCFF023NGN, ENCFF682XGC 473952830 ENCODE Processing Pipeline ff62bbf29131d63071e15f5e22f09371 https://www.encodeproject.org/files/ENCFF327TQA/@@download/ENCFF327TQA.bigWig GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF780KVE bigWig signal p-value ENCSR000EGP ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF143-human ENCAB000AMR DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF023NGN, ENCFF682XGC, ENCFF975ZXB 581646892 ENCODE Processing Pipeline 2e246d529916c95188b31ef0c28a3c47 https://www.encodeproject.org/files/ENCFF780KVE/@@download/ENCFF780KVE.bigWig GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF581UCW bigWig signal p-value ENCSR000EGP ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF143-human ENCAB000AMR DNA see document see document False 2011-10-29 ENCODE 1 ENCFF023NGN, ENCFF975ZXB 544637512 ENCODE Processing Pipeline 8584b0a9fe4c7895d5d0eedf068156a6 https://www.encodeproject.org/files/ENCFF581UCW/@@download/ENCFF581UCW.bigWig GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF779NNV bigWig fold change over control ENCSR000EGP ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF143-human ENCAB000AMR DNA see document see document False 2011-10-29 ENCODE 1 ENCFF023NGN, ENCFF975ZXB 501607548 ENCODE Processing Pipeline cf62a052a7786a03c32e1a066052d252 https://www.encodeproject.org/files/ENCFF779NNV/@@download/ENCFF779NNV.bigWig GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF912GXX bigWig fold change over control ENCSR000EGP ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF143-human ENCAB000AMR DNA see document see document False 2011-10-29 ENCODE 2 ENCFF023NGN, ENCFF682XGC 391759827 ENCODE Processing Pipeline 85037558d2671761363b84b6b5ce2e10 https://www.encodeproject.org/files/ENCFF912GXX/@@download/ENCFF912GXX.bigWig GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF811ZGP bigWig fold change over control ENCSR000EGP ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF143-human ENCAB000AMR DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF023NGN, ENCFF682XGC, ENCFF975ZXB 742119892 ENCODE Processing Pipeline 85c1f50390d9a4f01b1869798212603f https://www.encodeproject.org/files/ENCFF811ZGP/@@download/ENCFF811ZGP.bigWig GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF912GFX bed narrowPeak peaks ENCSR000EGP ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF143-human ENCAB000AMR DNA see document see document False 2011-10-29 ENCODE 1 ENCFF023NGN, ENCFF975ZXB 5230461 ENCODE Processing Pipeline 1dff45d0100d976f37a77ff96ab1320a https://www.encodeproject.org/files/ENCFF912GFX/@@download/ENCFF912GFX.bed.gz GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF678KIC bigBed narrowPeak peaks ENCSR000EGP ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF143-human ENCAB000AMR DNA see document see document False 2011-10-29 ENCODE 1 ENCFF912GFX 11190066 ENCODE Processing Pipeline b18180db97fb7f6fb3d4ac61c7354c74 https://www.encodeproject.org/files/ENCFF678KIC/@@download/ENCFF678KIC.bigBed GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF493ZHZ bed narrowPeak peaks ENCSR000EGP ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF143-human ENCAB000AMR DNA see document see document False 2011-10-29 ENCODE 2 ENCFF023NGN, ENCFF682XGC 4770260 ENCODE Processing Pipeline dfd0acc6803913c793fc368c546744d7 https://www.encodeproject.org/files/ENCFF493ZHZ/@@download/ENCFF493ZHZ.bed.gz GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF086USH bed narrowPeak conservative idr thresholded peaks ENCSR000EGP ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF143-human ENCAB000AMR DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF256RXW, ENCFF419RSJ, ENCFF493ZHZ, ENCFF912GFX 418038 ENCODE Processing Pipeline 5d148ece198c9a75d566251b85914259 https://www.encodeproject.org/files/ENCFF086USH/@@download/ENCFF086USH.bed.gz GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF738AMP bigBed narrowPeak conservative idr thresholded peaks ENCSR000EGP ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF143-human ENCAB000AMR DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF086USH 744935 ENCODE Processing Pipeline 89e1ae25a386f1df0b60c3d25380497b https://www.encodeproject.org/files/ENCFF738AMP/@@download/ENCFF738AMP.bigBed GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF256RXW bed narrowPeak peaks ENCSR000EGP ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF143-human ENCAB000AMR DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF023NGN, ENCFF682XGC, ENCFF975ZXB 2860111 ENCODE Processing Pipeline 3b2de140ca940de34b8947c6639fea71 https://www.encodeproject.org/files/ENCFF256RXW/@@download/ENCFF256RXW.bed.gz GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF966QHJ bigBed narrowPeak peaks ENCSR000EGP ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF143-human ENCAB000AMR DNA see document see document False 2011-10-29 ENCODE 2 ENCFF493ZHZ 10883565 ENCODE Processing Pipeline 1c8873bd79ff46bc539beb37a1e32379 https://www.encodeproject.org/files/ENCFF966QHJ/@@download/ENCFF966QHJ.bigBed GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF761SGQ bigBed narrowPeak peaks ENCSR000EGP ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF143-human ENCAB000AMR DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF256RXW 5339494 ENCODE Processing Pipeline d245d2601a06243271af9d05c91e18be https://www.encodeproject.org/files/ENCFF761SGQ/@@download/ENCFF761SGQ.bigBed GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF700GZI bed narrowPeak optimal idr thresholded peaks ENCSR000EGP ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF143-human ENCAB000AMR DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF256RXW, ENCFF419RSJ, ENCFF493ZHZ, ENCFF912GFX 506955 ENCODE Processing Pipeline 0763f9b615cf96f8212332eb4a11703f https://www.encodeproject.org/files/ENCFF700GZI/@@download/ENCFF700GZI.bed.gz GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF845VPO bigBed narrowPeak optimal idr thresholded peaks ENCSR000EGP ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF143-human ENCAB000AMR DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF700GZI 866480 ENCODE Processing Pipeline 0806b16365b9580a5cdc24e966f33edd https://www.encodeproject.org/files/ENCFF845VPO/@@download/ENCFF845VPO.bigBed GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF093OOU bigWig signal p-value ENCSR000EGP ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF143-human ENCAB000AMR DNA see document see document False 2011-10-29 ENCODE 1 ENCFF347FTA, ENCFF710NTS 512748008 ENCODE Processing Pipeline 2a7209021d95d50d4ec9b402d5460339 https://www.encodeproject.org/files/ENCFF093OOU/@@download/ENCFF093OOU.bigWig hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF284VVH bigWig signal p-value ENCSR000EGP ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF143-human ENCAB000AMR DNA see document see document False 2011-10-29 ENCODE 2 ENCFF710NTS, ENCFF872IPB 455344436 ENCODE Processing Pipeline ab9070645e7758ec1ffc2cd12032d361 https://www.encodeproject.org/files/ENCFF284VVH/@@download/ENCFF284VVH.bigWig hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF524SLR bigWig fold change over control ENCSR000EGP ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF143-human ENCAB000AMR DNA see document see document False 2011-10-29 ENCODE 2 ENCFF710NTS, ENCFF872IPB 394332400 ENCODE Processing Pipeline 0d1ac6624c20317affcc69d1ffb1788f https://www.encodeproject.org/files/ENCFF524SLR/@@download/ENCFF524SLR.bigWig hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF480IMY bed narrowPeak conservative idr thresholded peaks ENCSR000EGP ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF143-human ENCAB000AMR DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF001TDO, ENCFF178ANU, ENCFF971SGR, ENCFF984KWO 413759 ENCODE Processing Pipeline 40b5ab31d087df93584ef56c7b5c71bc https://www.encodeproject.org/files/ENCFF480IMY/@@download/ENCFF480IMY.bed.gz hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF718MRX bigBed narrowPeak conservative idr thresholded peaks ENCSR000EGP ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF143-human ENCAB000AMR DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF480IMY 737517 ENCODE Processing Pipeline 662948da53754725b18d6970f7fdc80c https://www.encodeproject.org/files/ENCFF718MRX/@@download/ENCFF718MRX.bigBed hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF433DSB bigWig signal p-value ENCSR000EGP ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF143-human ENCAB000AMR DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF347FTA, ENCFF710NTS, ENCFF872IPB 581899881 ENCODE Processing Pipeline 9b5e98a915e3022a96f35cb350636964 https://www.encodeproject.org/files/ENCFF433DSB/@@download/ENCFF433DSB.bigWig hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF114IWY bed narrowPeak optimal idr thresholded peaks ENCSR000EGP ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF143-human ENCAB000AMR DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF001TDO, ENCFF178ANU, ENCFF971SGR, ENCFF984KWO 507074 ENCODE Processing Pipeline 2080efa4f0591f3162e78e92da027eb5 https://www.encodeproject.org/files/ENCFF114IWY/@@download/ENCFF114IWY.bed.gz hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF149FQR bigWig fold change over control ENCSR000EGP ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF143-human ENCAB000AMR DNA see document see document False 2011-10-29 ENCODE 1 ENCFF347FTA, ENCFF710NTS 485082952 ENCODE Processing Pipeline 909934c7c349489e35f597d11d32f5d4 https://www.encodeproject.org/files/ENCFF149FQR/@@download/ENCFF149FQR.bigWig hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF165ALS bigBed narrowPeak peaks ENCSR000EGP ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF143-human ENCAB000AMR DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF984KWO 5312778 ENCODE Processing Pipeline 7a02f999afc1e133dce961b49471d6c3 https://www.encodeproject.org/files/ENCFF165ALS/@@download/ENCFF165ALS.bigBed hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF178ANU bed narrowPeak peaks ENCSR000EGP ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF143-human ENCAB000AMR DNA see document see document False 2011-10-29 ENCODE 2 ENCFF710NTS, ENCFF872IPB 4771447 ENCODE Processing Pipeline c491087f20ab9c04bfa876874b59502c https://www.encodeproject.org/files/ENCFF178ANU/@@download/ENCFF178ANU.bed.gz hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF227SIP bigBed narrowPeak peaks ENCSR000EGP ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF143-human ENCAB000AMR DNA see document see document False 2011-10-29 ENCODE 1 ENCFF971SGR 11137591 ENCODE Processing Pipeline e88840f487e5d74f0c4828ead5c5c465 https://www.encodeproject.org/files/ENCFF227SIP/@@download/ENCFF227SIP.bigBed hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF178RYF bigWig fold change over control ENCSR000EGP ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF143-human ENCAB000AMR DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF347FTA, ENCFF710NTS, ENCFF872IPB 757448804 ENCODE Processing Pipeline 0dc8bf06da2bd379b46ed7b0869bc7d1 https://www.encodeproject.org/files/ENCFF178RYF/@@download/ENCFF178RYF.bigWig hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF971SGR bed narrowPeak peaks ENCSR000EGP ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF143-human ENCAB000AMR DNA see document see document False 2011-10-29 ENCODE 1 ENCFF347FTA, ENCFF710NTS 5103569 ENCODE Processing Pipeline db8c61fb2f09825b33c89d66fc02a24a https://www.encodeproject.org/files/ENCFF971SGR/@@download/ENCFF971SGR.bed.gz hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF984KWO bed narrowPeak peaks ENCSR000EGP ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF143-human ENCAB000AMR DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF347FTA, ENCFF710NTS, ENCFF872IPB 2847576 ENCODE Processing Pipeline f52f093100b1ca7d42534ce5b44d7c9c https://www.encodeproject.org/files/ENCFF984KWO/@@download/ENCFF984KWO.bed.gz hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF468SUD bigBed narrowPeak peaks ENCSR000EGP ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF143-human ENCAB000AMR DNA see document see document False 2011-10-29 ENCODE 2 ENCFF178ANU 10869730 ENCODE Processing Pipeline e0a85bd6d35f7a5c314c424ecff4a017 https://www.encodeproject.org/files/ENCFF468SUD/@@download/ENCFF468SUD.bigBed hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF976GGT bigBed narrowPeak optimal idr thresholded peaks ENCSR000EGP ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF143-human ENCAB000AMR DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF114IWY 866225 ENCODE Processing Pipeline 94055f585bf73370ea61598a98c9806b https://www.encodeproject.org/files/ENCFF976GGT/@@download/ENCFF976GGT.bigBed hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF902NOA bam unfiltered alignments ENCSR400FSM ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-POLR2H-human ENCAB728YTO DNA False 2016-08-24 ENCODE 2 100 ENCFF022SAF, ENCFF277ZND, ENCFF446YHR, ENCFF524UOO, ENCFF807MUK 5168459783 ENCODE Processing Pipeline c137a886e14c0e496ac7031247c895fa https://www.encodeproject.org/files/ENCFF902NOA/@@download/ENCFF902NOA.bam hg19 released control low read depth, low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF995XPS bam unfiltered alignments ENCSR400FSM ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-POLR2H-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1 100 ENCFF613UAT, ENCFF618IBA, ENCFF807MUK 4687829583 ENCODE Processing Pipeline f741cb2bd6ad87a8e2a3543e8bce8315 https://www.encodeproject.org/files/ENCFF995XPS/@@download/ENCFF995XPS.bam hg19 released control low read depth, low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF277ZND fastq reads ENCSR400FSM ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-POLR2H-human ENCAB728YTO DNA False 2016-08-24 ENCODE 2 1 100 paired-ended 2 ENCFF524UOO 1549079725 Michael Snyder, Stanford 473f3f62e168e3e027b0ab1d7a8bb001 SRA:SRR5111541 https://www.encodeproject.org/files/ENCFF277ZND/@@download/ENCFF277ZND.fastq.gz Illumina HiSeq 2000 /files/ENCFF026HSI/, /files/ENCFF096LLU/ released control low read depth, low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF613UAT fastq reads ENCSR400FSM ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-POLR2H-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1 1 100 paired-ended 1 ENCFF618IBA 2318704612 Michael Snyder, Stanford defc7a4f9384dfd28bc2477e423fb8ff SRA:SRR5111539 https://www.encodeproject.org/files/ENCFF613UAT/@@download/ENCFF613UAT.fastq.gz Illumina HiSeq 2000 /files/ENCFF026HSI/, /files/ENCFF096LLU/ released control low read depth, low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF446YHR fastq reads ENCSR400FSM ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-POLR2H-human ENCAB728YTO DNA False 2016-08-24 ENCODE 2 1 100 paired-ended 2 ENCFF022SAF 1032838611 Michael Snyder, Stanford 7eae997c3b0f88a02f294d3dee0cca3d SRA:SRR5111540 https://www.encodeproject.org/files/ENCFF446YHR/@@download/ENCFF446YHR.fastq.gz Illumina HiSeq 2000 /files/ENCFF026HSI/, /files/ENCFF096LLU/ released control low read depth, low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF022SAF fastq reads ENCSR400FSM ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-POLR2H-human ENCAB728YTO DNA False 2016-08-24 ENCODE 2 1 100 paired-ended 1 ENCFF446YHR 987927105 Michael Snyder, Stanford 8df8212df71ec6f5eba971b6b618ff09 SRA:SRR5111540 https://www.encodeproject.org/files/ENCFF022SAF/@@download/ENCFF022SAF.fastq.gz Illumina HiSeq 2000 /files/ENCFF026HSI/, /files/ENCFF096LLU/ released control low read depth, low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF618IBA fastq reads ENCSR400FSM ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-POLR2H-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1 1 100 paired-ended 2 ENCFF613UAT 2431254592 Michael Snyder, Stanford 43a1c3a054513cfa20065c1244d36e7e SRA:SRR5111539 https://www.encodeproject.org/files/ENCFF618IBA/@@download/ENCFF618IBA.fastq.gz Illumina HiSeq 2000 /files/ENCFF026HSI/, /files/ENCFF096LLU/ released control low read depth, low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF524UOO fastq reads ENCSR400FSM ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-POLR2H-human ENCAB728YTO DNA False 2016-08-24 ENCODE 2 1 100 paired-ended 1 ENCFF277ZND 1547613635 Michael Snyder, Stanford e7933e68b456fc41264816ec54ea369b SRA:SRR5111541 https://www.encodeproject.org/files/ENCFF524UOO/@@download/ENCFF524UOO.fastq.gz Illumina HiSeq 2000 /files/ENCFF026HSI/, /files/ENCFF096LLU/ released control low read depth, low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF658ADO bam alignments ENCSR400FSM ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-POLR2H-human ENCAB728YTO DNA False 2016-08-24 ENCODE 2 ENCFF022SAF, ENCFF277ZND, ENCFF446YHR, ENCFF524UOO, ENCFF807MUK 3439976857 ENCODE Processing Pipeline 5556514db160db4778806961082f94be https://www.encodeproject.org/files/ENCFF658ADO/@@download/ENCFF658ADO.bam hg19 released control low read depth, low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF800BIH bam alignments ENCSR400FSM ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-POLR2H-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1 ENCFF613UAT, ENCFF618IBA, ENCFF807MUK 2764817616 ENCODE Processing Pipeline 3935af74c9962cfe8db1fbee67ed9981 https://www.encodeproject.org/files/ENCFF800BIH/@@download/ENCFF800BIH.bam hg19 released control low read depth, low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF302ZWQ bigWig signal p-value ENCSR400FSM ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-POLR2H-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1 ENCFF469YUW, ENCFF800BIH 633912790 ENCODE Processing Pipeline e133d78a9d726a67d58629d1e2115b8c https://www.encodeproject.org/files/ENCFF302ZWQ/@@download/ENCFF302ZWQ.bigWig hg19 released control low read depth, low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF003VRX bigWig fold change over control ENCSR400FSM ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-POLR2H-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1 ENCFF469YUW, ENCFF800BIH 662947884 ENCODE Processing Pipeline ede0e05cf4740d864658eb1ba5a58751 https://www.encodeproject.org/files/ENCFF003VRX/@@download/ENCFF003VRX.bigWig hg19 released control low read depth, low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF062XFS bigWig fold change over control ENCSR400FSM ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-POLR2H-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF469YUW, ENCFF658ADO, ENCFF800BIH 1099189163 ENCODE Processing Pipeline e2dffeca567c5d7e8f798184dde6ea6d https://www.encodeproject.org/files/ENCFF062XFS/@@download/ENCFF062XFS.bigWig hg19 released control low read depth, low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF005WLV bigWig signal p-value ENCSR400FSM ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-POLR2H-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF469YUW, ENCFF658ADO, ENCFF800BIH 720497318 ENCODE Processing Pipeline 4f60407e99a0740f21a394bd93211f5d https://www.encodeproject.org/files/ENCFF005WLV/@@download/ENCFF005WLV.bigWig hg19 released control low read depth, low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF559WEI bigWig fold change over control ENCSR400FSM ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-POLR2H-human ENCAB728YTO DNA False 2016-08-24 ENCODE 2 ENCFF469YUW, ENCFF658ADO 753966248 ENCODE Processing Pipeline b046fd7fc360c7285d009f8c69ee96a3 https://www.encodeproject.org/files/ENCFF559WEI/@@download/ENCFF559WEI.bigWig hg19 released control low read depth, low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF568ATE bigWig signal p-value ENCSR400FSM ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-POLR2H-human ENCAB728YTO DNA False 2016-08-24 ENCODE 2 ENCFF469YUW, ENCFF658ADO 753102829 ENCODE Processing Pipeline 137d046ad5fc0704fbdd2fb9962e440b https://www.encodeproject.org/files/ENCFF568ATE/@@download/ENCFF568ATE.bigWig hg19 released control low read depth, low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF642AZQ bed narrowPeak peaks ENCSR400FSM ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-POLR2H-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1 ENCFF469YUW, ENCFF800BIH 6908161 ENCODE Processing Pipeline df619303cb7cd7dd5aa205ccf8675504 https://www.encodeproject.org/files/ENCFF642AZQ/@@download/ENCFF642AZQ.bed.gz hg19 released control low read depth, low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF229OHX bigBed narrowPeak peaks ENCSR400FSM ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-POLR2H-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF923FBF 12237068 ENCODE Processing Pipeline a88fe483d6d9cb52fb54ce2c947b3794 https://www.encodeproject.org/files/ENCFF229OHX/@@download/ENCFF229OHX.bigBed hg19 released control low read depth, low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF964AOB bigBed narrowPeak optimal idr thresholded peaks ENCSR400FSM ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-POLR2H-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF801YZV 1091420 ENCODE Processing Pipeline b5a2fa7f39c96aabcd256bdcc41bf875 https://www.encodeproject.org/files/ENCFF964AOB/@@download/ENCFF964AOB.bigBed hg19 released control low read depth, low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF910COF bed narrowPeak conservative idr thresholded peaks ENCSR400FSM ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-POLR2H-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF001TDO, ENCFF138QHW, ENCFF642AZQ, ENCFF923FBF 427638 ENCODE Processing Pipeline 431e0ad1d8469bf48bd6bf98ff3065d3 https://www.encodeproject.org/files/ENCFF910COF/@@download/ENCFF910COF.bed.gz hg19 released control low read depth, low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF575QDQ bigBed narrowPeak peaks ENCSR400FSM ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-POLR2H-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1 ENCFF642AZQ 12488731 ENCODE Processing Pipeline 8682d10ea4f6f46133a4568218e47817 https://www.encodeproject.org/files/ENCFF575QDQ/@@download/ENCFF575QDQ.bigBed hg19 released control low read depth, low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF138QHW bed narrowPeak peaks ENCSR400FSM ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-POLR2H-human ENCAB728YTO DNA False 2016-08-24 ENCODE 2 ENCFF469YUW, ENCFF658ADO 6967604 ENCODE Processing Pipeline 3332e75add43e3f65ea6492367248cb1 https://www.encodeproject.org/files/ENCFF138QHW/@@download/ENCFF138QHW.bed.gz hg19 released control low read depth, low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF923FBF bed narrowPeak peaks ENCSR400FSM ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-POLR2H-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF469YUW, ENCFF658ADO, ENCFF800BIH 7258022 ENCODE Processing Pipeline 7635e09ee8a1201a82a81ebfe3ccb1e5 https://www.encodeproject.org/files/ENCFF923FBF/@@download/ENCFF923FBF.bed.gz hg19 released control low read depth, low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF411VMP bigBed narrowPeak peaks ENCSR400FSM ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-POLR2H-human ENCAB728YTO DNA False 2016-08-24 ENCODE 2 ENCFF138QHW 12397066 ENCODE Processing Pipeline 739d85383625fd8354768384924ca2fa https://www.encodeproject.org/files/ENCFF411VMP/@@download/ENCFF411VMP.bigBed hg19 released control low read depth, low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF176ZVU bigBed narrowPeak conservative idr thresholded peaks ENCSR400FSM ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-POLR2H-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF910COF 1084455 ENCODE Processing Pipeline 66f88706ca7e766091c81228793d4c79 https://www.encodeproject.org/files/ENCFF176ZVU/@@download/ENCFF176ZVU.bigBed hg19 released control low read depth, low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF801YZV bed narrowPeak optimal idr thresholded peaks ENCSR400FSM ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-POLR2H-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF001TDO, ENCFF138QHW, ENCFF642AZQ, ENCFF923FBF 430559 ENCODE Processing Pipeline 21629fbc4edc4f436e21cde911048f95 https://www.encodeproject.org/files/ENCFF801YZV/@@download/ENCFF801YZV.bed.gz hg19 released control low read depth, low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF398YEY bam unfiltered alignments ENCSR400FSM ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-POLR2H-human ENCAB728YTO DNA False 2016-08-24 ENCODE 2 100 ENCFF022SAF, ENCFF277ZND, ENCFF446YHR, ENCFF524UOO, ENCFF643CGH 5169857312 ENCODE Processing Pipeline 82cd8adb137330fa2dc1db3b8fe1632b https://www.encodeproject.org/files/ENCFF398YEY/@@download/ENCFF398YEY.bam GRCh38 released control low read depth, low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF241ZAF bam alignments ENCSR400FSM ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-POLR2H-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1 100 ENCFF613UAT, ENCFF618IBA, ENCFF643CGH 2765822513 ENCODE Processing Pipeline 870f03c0fc788af1256644b612fd4647 https://www.encodeproject.org/files/ENCFF241ZAF/@@download/ENCFF241ZAF.bam GRCh38 released control low read depth, low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF825VBC bam alignments ENCSR400FSM ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-POLR2H-human ENCAB728YTO DNA False 2016-08-24 ENCODE 2 100 ENCFF022SAF, ENCFF277ZND, ENCFF446YHR, ENCFF524UOO, ENCFF643CGH 3442023711 ENCODE Processing Pipeline c1627a8054a7ad4e1e0985535816fb13 https://www.encodeproject.org/files/ENCFF825VBC/@@download/ENCFF825VBC.bam GRCh38 released control low read depth, low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF665FNS bam unfiltered alignments ENCSR400FSM ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-POLR2H-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1 100 ENCFF613UAT, ENCFF618IBA, ENCFF643CGH 4687145462 ENCODE Processing Pipeline c9f382d2d7e92e0b22df70233fde536e https://www.encodeproject.org/files/ENCFF665FNS/@@download/ENCFF665FNS.bam GRCh38 released control low read depth, low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF400QUR bigWig signal p-value ENCSR400FSM ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-POLR2H-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1 ENCFF241ZAF, ENCFF448DJP 535774413 ENCODE Processing Pipeline 2d509c54df2665347ccd8907f8460b23 https://www.encodeproject.org/files/ENCFF400QUR/@@download/ENCFF400QUR.bigWig GRCh38 released control low read depth, low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF511QRN bigWig signal p-value ENCSR400FSM ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-POLR2H-human ENCAB728YTO DNA False 2016-08-24 ENCODE 2 ENCFF448DJP, ENCFF825VBC 725558650 ENCODE Processing Pipeline 3f0d1f723f8d153be742ba34c08928ef https://www.encodeproject.org/files/ENCFF511QRN/@@download/ENCFF511QRN.bigWig GRCh38 released control low read depth, low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF019RIT bigWig signal p-value ENCSR400FSM ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-POLR2H-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF241ZAF, ENCFF448DJP, ENCFF825VBC 727328613 ENCODE Processing Pipeline d7f140b27983e82eb0e357eba6115ded https://www.encodeproject.org/files/ENCFF019RIT/@@download/ENCFF019RIT.bigWig GRCh38 released control low read depth, low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF310SPV bigWig fold change over control ENCSR400FSM ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-POLR2H-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1 ENCFF241ZAF, ENCFF448DJP 679245816 ENCODE Processing Pipeline 288196f59f6d543a6f1258541485ccf6 https://www.encodeproject.org/files/ENCFF310SPV/@@download/ENCFF310SPV.bigWig GRCh38 released control low read depth, low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF127UGQ bigWig fold change over control ENCSR400FSM ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-POLR2H-human ENCAB728YTO DNA False 2016-08-24 ENCODE 2 ENCFF448DJP, ENCFF825VBC 752870095 ENCODE Processing Pipeline 5cc42132a7bfa05fdcc5931c6a56268e https://www.encodeproject.org/files/ENCFF127UGQ/@@download/ENCFF127UGQ.bigWig GRCh38 released control low read depth, low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF717XWU bed narrowPeak peaks ENCSR400FSM ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-POLR2H-human ENCAB728YTO DNA False 2016-08-24 ENCODE 2 ENCFF448DJP, ENCFF825VBC 6873192 ENCODE Processing Pipeline 1f57ba82231b59474d4751b8a434c3e6 https://www.encodeproject.org/files/ENCFF717XWU/@@download/ENCFF717XWU.bed.gz GRCh38 released control low read depth, low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF276SWS bigWig fold change over control ENCSR400FSM ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-POLR2H-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF241ZAF, ENCFF448DJP, ENCFF825VBC 1109629632 ENCODE Processing Pipeline 74104b4ea83148d7f924bfed17cb2d66 https://www.encodeproject.org/files/ENCFF276SWS/@@download/ENCFF276SWS.bigWig GRCh38 released control low read depth, low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF357PZU bed narrowPeak peaks ENCSR400FSM ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-POLR2H-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1 ENCFF241ZAF, ENCFF448DJP 6781607 ENCODE Processing Pipeline 9e116b17ae83577de98675a3ee3e8457 https://www.encodeproject.org/files/ENCFF357PZU/@@download/ENCFF357PZU.bed.gz GRCh38 released control low read depth, low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF026FEJ bed narrowPeak conservative idr thresholded peaks ENCSR400FSM ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-POLR2H-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF357PZU, ENCFF419RSJ, ENCFF420GQF, ENCFF717XWU 429898 ENCODE Processing Pipeline c2331f927f2bc802a49835662479d625 https://www.encodeproject.org/files/ENCFF026FEJ/@@download/ENCFF026FEJ.bed.gz GRCh38 released control low read depth, low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF420GQF bed narrowPeak peaks ENCSR400FSM ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-POLR2H-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF241ZAF, ENCFF448DJP, ENCFF825VBC 7240416 ENCODE Processing Pipeline 2bf2d97a56fc21758d740dae80bbcf2d https://www.encodeproject.org/files/ENCFF420GQF/@@download/ENCFF420GQF.bed.gz GRCh38 released control low read depth, low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF489BXE bigBed narrowPeak peaks ENCSR400FSM ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-POLR2H-human ENCAB728YTO DNA False 2016-08-24 ENCODE 2 ENCFF717XWU 12422624 ENCODE Processing Pipeline 5bc6f55f85698f37d062a69ce6615e65 https://www.encodeproject.org/files/ENCFF489BXE/@@download/ENCFF489BXE.bigBed GRCh38 released control low read depth, low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF726AIY bigBed narrowPeak conservative idr thresholded peaks ENCSR400FSM ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-POLR2H-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF026FEJ 1090904 ENCODE Processing Pipeline 7a88dc773a7e5243c703f72e039cc396 https://www.encodeproject.org/files/ENCFF726AIY/@@download/ENCFF726AIY.bigBed GRCh38 released control low read depth, low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF922MYE bed narrowPeak optimal idr thresholded peaks ENCSR400FSM ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-POLR2H-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF357PZU, ENCFF419RSJ, ENCFF420GQF, ENCFF717XWU 431668 ENCODE Processing Pipeline 2e77a9768dd3084d806135f4607f3d3d https://www.encodeproject.org/files/ENCFF922MYE/@@download/ENCFF922MYE.bed.gz GRCh38 released control low read depth, low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF959CCZ bigBed narrowPeak optimal idr thresholded peaks ENCSR400FSM ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-POLR2H-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF922MYE 1096503 ENCODE Processing Pipeline 4c5b69e62f6014e1589b7be273994ebe https://www.encodeproject.org/files/ENCFF959CCZ/@@download/ENCFF959CCZ.bigBed GRCh38 released control low read depth, low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF921ZEU bigBed narrowPeak peaks ENCSR400FSM ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-POLR2H-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1 ENCFF357PZU 12497544 ENCODE Processing Pipeline fa9e678ce2a68b34f487845c6dd2a5fc https://www.encodeproject.org/files/ENCFF921ZEU/@@download/ENCFF921ZEU.bigBed GRCh38 released control low read depth, low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF002LRU bigBed narrowPeak peaks ENCSR400FSM ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-POLR2H-human ENCAB728YTO DNA False 2016-08-24 ENCODE 1, 2 ENCFF420GQF 12245697 ENCODE Processing Pipeline 846a8202c8af202d79c8b028ad613cec https://www.encodeproject.org/files/ENCFF002LRU/@@download/ENCFF002LRU.bigBed GRCh38 released control low read depth, low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF615SOF fastq reads ENCSR670JDQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens RB1-human ENCAB000BFB DNA False 2017-03-16 ENCODE 3 1 100 paired-ended 1 ENCFF656UEH 3290865264 Michael Snyder, Stanford 0e8855a3e0f4727fe70de4dff17e674b SRA:SRR6213609 https://www.encodeproject.org/files/ENCFF615SOF/@@download/ENCFF615SOF.fastq.gz Illumina HiSeq 2000 /files/ENCFF410PHD/ released low read depth, mild to moderate bottlenecking ENCFF268JOY fastq reads ENCSR670JDQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens RB1-human ENCAB000BFB DNA False 2017-03-16 ENCODE 4 1 100 paired-ended 2 ENCFF935GDU 2913537991 Michael Snyder, Stanford 22c7807770b1e3fd4cba322a5cb65690 SRA:SRR6213608 https://www.encodeproject.org/files/ENCFF268JOY/@@download/ENCFF268JOY.fastq.gz Illumina HiSeq 2000 /files/ENCFF608MDV/ released low read depth, mild to moderate bottlenecking ENCFF656UEH fastq reads ENCSR670JDQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens RB1-human ENCAB000BFB DNA False 2017-03-16 ENCODE 3 1 100 paired-ended 2 ENCFF615SOF 3508990409 Michael Snyder, Stanford 356d9b9d5eb7afeb6f445c3406b0b0eb SRA:SRR6213609 https://www.encodeproject.org/files/ENCFF656UEH/@@download/ENCFF656UEH.fastq.gz Illumina HiSeq 2000 /files/ENCFF368UOC/ released low read depth, mild to moderate bottlenecking ENCFF935GDU fastq reads ENCSR670JDQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens RB1-human ENCAB000BFB DNA False 2017-03-16 ENCODE 4 1 100 paired-ended 1 ENCFF268JOY 2793274381 Michael Snyder, Stanford 6e674c92f3eed3f641966148f222afdb SRA:SRR6213608 https://www.encodeproject.org/files/ENCFF935GDU/@@download/ENCFF935GDU.fastq.gz Illumina HiSeq 2000 /files/ENCFF240DTE/ released low read depth, mild to moderate bottlenecking ENCFF003UGN bam unfiltered alignments ENCSR670JDQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens RB1-human ENCAB000BFB DNA False 2017-03-16 ENCODE 3 100 ENCFF615SOF, ENCFF656UEH, ENCFF807MUK 6404842039 ENCODE Processing Pipeline e0f8a6f3d37d8f834cb50d281e0ca236 https://www.encodeproject.org/files/ENCFF003UGN/@@download/ENCFF003UGN.bam hg19 released low read depth, mild to moderate bottlenecking ENCFF637PNR bam alignments ENCSR670JDQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens RB1-human ENCAB000BFB DNA False 2017-03-16 ENCODE 4 100 ENCFF268JOY, ENCFF807MUK, ENCFF935GDU 3731919249 ENCODE Processing Pipeline a46d5faf54276324a80a93dc8cb45b9b https://www.encodeproject.org/files/ENCFF637PNR/@@download/ENCFF637PNR.bam hg19 released low read depth, mild to moderate bottlenecking ENCFF023AOR bam unfiltered alignments ENCSR670JDQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens RB1-human ENCAB000BFB DNA False 2017-03-16 ENCODE 4 100 ENCFF268JOY, ENCFF643CGH, ENCFF935GDU 5479143820 ENCODE Processing Pipeline 4ef36bd10bf872636d4ae0f85360a6b3 https://www.encodeproject.org/files/ENCFF023AOR/@@download/ENCFF023AOR.bam GRCh38 released low read depth, mild to moderate bottlenecking ENCFF459MNI bam alignments ENCSR670JDQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens RB1-human ENCAB000BFB DNA False 2017-03-16 ENCODE 4 100 ENCFF268JOY, ENCFF643CGH, ENCFF935GDU 3732395970 ENCODE Processing Pipeline 03c54338d5cc2afc578eae917b0fe13b https://www.encodeproject.org/files/ENCFF459MNI/@@download/ENCFF459MNI.bam GRCh38 released low read depth, mild to moderate bottlenecking ENCFF692TUA bam unfiltered alignments ENCSR670JDQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens RB1-human ENCAB000BFB DNA False 2017-03-16 ENCODE 4 100 ENCFF268JOY, ENCFF807MUK, ENCFF935GDU 5477682748 ENCODE Processing Pipeline e69a3210c5f169aaa6d62652dc1413ef https://www.encodeproject.org/files/ENCFF692TUA/@@download/ENCFF692TUA.bam hg19 released low read depth, mild to moderate bottlenecking ENCFF621VLS bam unfiltered alignments ENCSR670JDQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens RB1-human ENCAB000BFB DNA False 2017-03-16 ENCODE 3 100 ENCFF615SOF, ENCFF643CGH, ENCFF656UEH 6405003827 ENCODE Processing Pipeline 54482e785e441bdb45a430594f48ce1e https://www.encodeproject.org/files/ENCFF621VLS/@@download/ENCFF621VLS.bam GRCh38 released low read depth, mild to moderate bottlenecking ENCFF706XFF bam alignments ENCSR670JDQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens RB1-human ENCAB000BFB DNA False 2017-03-16 ENCODE 3 100 ENCFF615SOF, ENCFF643CGH, ENCFF656UEH 3511182038 ENCODE Processing Pipeline 2ed5208dc0128e5916a3ee9565c92d4d https://www.encodeproject.org/files/ENCFF706XFF/@@download/ENCFF706XFF.bam GRCh38 released low read depth, mild to moderate bottlenecking ENCFF594JBQ bam alignments ENCSR670JDQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens RB1-human ENCAB000BFB DNA False 2017-03-16 ENCODE 3 100 ENCFF615SOF, ENCFF656UEH, ENCFF807MUK 3511379072 ENCODE Processing Pipeline 3f3c390476f41b44b047fabfa7f3cff8 https://www.encodeproject.org/files/ENCFF594JBQ/@@download/ENCFF594JBQ.bam hg19 released low read depth, mild to moderate bottlenecking ENCFF651NGP bigWig fold change over control ENCSR670JDQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens RB1-human ENCAB000BFB DNA False 2017-03-16 ENCODE 3 ENCFF262CJE, ENCFF506DFV, ENCFF594JBQ 1120970348 ENCODE Processing Pipeline 5d5a3e3eaffef10ffb28fe679eb8d6cc https://www.encodeproject.org/files/ENCFF651NGP/@@download/ENCFF651NGP.bigWig hg19 released low read depth, mild to moderate bottlenecking ENCFF634SVO bed narrowPeak peaks ENCSR670JDQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens RB1-human ENCAB000BFB DNA False 2017-03-16 ENCODE 4 ENCFF262CJE, ENCFF506DFV, ENCFF637PNR 6429786 ENCODE Processing Pipeline e0d3f9a83e1cb435065912e0a3b08a02 https://www.encodeproject.org/files/ENCFF634SVO/@@download/ENCFF634SVO.bed.gz hg19 released low read depth, mild to moderate bottlenecking ENCFF197MJO bed narrowPeak peaks ENCSR670JDQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens RB1-human ENCAB000BFB DNA False 2017-03-16 ENCODE 3 ENCFF262CJE, ENCFF506DFV, ENCFF594JBQ 5923774 ENCODE Processing Pipeline 121bb1bdc84e093168dc663ffbb01560 https://www.encodeproject.org/files/ENCFF197MJO/@@download/ENCFF197MJO.bed.gz hg19 released low read depth, mild to moderate bottlenecking ENCFF420RMA bigBed narrowPeak peaks ENCSR670JDQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens RB1-human ENCAB000BFB DNA False 2017-03-16 ENCODE 3 ENCFF197MJO 11381488 ENCODE Processing Pipeline c4efd649e246f8b20d36f3769be232cd https://www.encodeproject.org/files/ENCFF420RMA/@@download/ENCFF420RMA.bigBed hg19 released low read depth, mild to moderate bottlenecking ENCFF359SHT bigWig signal p-value ENCSR670JDQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens RB1-human ENCAB000BFB DNA False 2017-03-16 ENCODE 3, 4 ENCFF262CJE, ENCFF506DFV, ENCFF594JBQ, ENCFF637PNR 1556849531 ENCODE Processing Pipeline 4b80e168b6700e99211003b2553c340b https://www.encodeproject.org/files/ENCFF359SHT/@@download/ENCFF359SHT.bigWig hg19 released low read depth, mild to moderate bottlenecking ENCFF400NKF bed narrowPeak conservative idr thresholded peaks ENCSR670JDQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens RB1-human ENCAB000BFB DNA False 2017-03-16 ENCODE 3, 4 ENCFF001TDO, ENCFF197MJO, ENCFF634SVO, ENCFF801LNJ 395202 ENCODE Processing Pipeline ab7de6bb6896665b52f6e4f3189cfb79 https://www.encodeproject.org/files/ENCFF400NKF/@@download/ENCFF400NKF.bed.gz hg19 released low read depth, mild to moderate bottlenecking ENCFF020FEG bigWig signal p-value ENCSR670JDQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens RB1-human ENCAB000BFB DNA False 2017-03-16 ENCODE 3 ENCFF262CJE, ENCFF506DFV, ENCFF594JBQ 1073559165 ENCODE Processing Pipeline d2ceba60dd94df23027a03c3ac5acec4 https://www.encodeproject.org/files/ENCFF020FEG/@@download/ENCFF020FEG.bigWig hg19 released low read depth, mild to moderate bottlenecking ENCFF132EQK bigBed narrowPeak conservative idr thresholded peaks ENCSR670JDQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens RB1-human ENCAB000BFB DNA False 2017-03-16 ENCODE 3, 4 ENCFF400NKF 848492 ENCODE Processing Pipeline 0eb8a6155d2971b609a026eff626497e https://www.encodeproject.org/files/ENCFF132EQK/@@download/ENCFF132EQK.bigBed hg19 released low read depth, mild to moderate bottlenecking ENCFF975IRM bed narrowPeak optimal idr thresholded peaks ENCSR670JDQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens RB1-human ENCAB000BFB DNA False 2017-03-16 ENCODE 3, 4 ENCFF001TDO, ENCFF197MJO, ENCFF634SVO, ENCFF801LNJ 469880 ENCODE Processing Pipeline 36677304d38b5f80815daf0f71286681 https://www.encodeproject.org/files/ENCFF975IRM/@@download/ENCFF975IRM.bed.gz hg19 released low read depth, mild to moderate bottlenecking ENCFF328QZM bed narrowPeak optimal idr thresholded peaks ENCSR670JDQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens RB1-human ENCAB000BFB DNA False 2017-03-16 ENCODE 3, 4 ENCFF036GCO, ENCFF115DWC, ENCFF419RSJ, ENCFF651LFT 472665 ENCODE Processing Pipeline a03eb83debb7f343eca8e52bf576135f https://www.encodeproject.org/files/ENCFF328QZM/@@download/ENCFF328QZM.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking ENCFF043GKY bigWig signal p-value ENCSR670JDQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens RB1-human ENCAB000BFB DNA False 2017-03-16 ENCODE 4 ENCFF262CJE, ENCFF506DFV, ENCFF637PNR 1311430266 ENCODE Processing Pipeline 1da63ed0c2298b143ef6079f0f8628e1 https://www.encodeproject.org/files/ENCFF043GKY/@@download/ENCFF043GKY.bigWig hg19 released low read depth, mild to moderate bottlenecking ENCFF676BPY bigWig fold change over control ENCSR670JDQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens RB1-human ENCAB000BFB DNA False 2017-03-16 ENCODE 4 ENCFF262CJE, ENCFF506DFV, ENCFF637PNR 1182882432 ENCODE Processing Pipeline 42c52a1837185ab571d4b6b1693e47b8 https://www.encodeproject.org/files/ENCFF676BPY/@@download/ENCFF676BPY.bigWig hg19 released low read depth, mild to moderate bottlenecking ENCFF989VKY bigWig fold change over control ENCSR670JDQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens RB1-human ENCAB000BFB DNA False 2017-03-16 ENCODE 3, 4 ENCFF262CJE, ENCFF506DFV, ENCFF594JBQ, ENCFF637PNR 1697752046 ENCODE Processing Pipeline 81d7b48595b50d216b26a231f666d86b https://www.encodeproject.org/files/ENCFF989VKY/@@download/ENCFF989VKY.bigWig hg19 released low read depth, mild to moderate bottlenecking ENCFF801LNJ bed narrowPeak peaks ENCSR670JDQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens RB1-human ENCAB000BFB DNA False 2017-03-16 ENCODE 3, 4 ENCFF262CJE, ENCFF506DFV, ENCFF594JBQ, ENCFF637PNR 7009580 ENCODE Processing Pipeline b57ed07d810b8a2fde28215fecfdd12b https://www.encodeproject.org/files/ENCFF801LNJ/@@download/ENCFF801LNJ.bed.gz hg19 released low read depth, mild to moderate bottlenecking ENCFF456QKB bigBed narrowPeak peaks ENCSR670JDQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens RB1-human ENCAB000BFB DNA False 2017-03-16 ENCODE 4 ENCFF634SVO 13391774 ENCODE Processing Pipeline f5a202b8634c720ab6ad59b9cf0a9556 https://www.encodeproject.org/files/ENCFF456QKB/@@download/ENCFF456QKB.bigBed hg19 released low read depth, mild to moderate bottlenecking ENCFF944SUN bigBed narrowPeak peaks ENCSR670JDQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens RB1-human ENCAB000BFB DNA False 2017-03-16 ENCODE 3, 4 ENCFF801LNJ 13262850 ENCODE Processing Pipeline ecce0195f2a05babb029758ec69fdd7a https://www.encodeproject.org/files/ENCFF944SUN/@@download/ENCFF944SUN.bigBed hg19 released low read depth, mild to moderate bottlenecking ENCFF068OGU bigBed narrowPeak optimal idr thresholded peaks ENCSR670JDQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens RB1-human ENCAB000BFB DNA False 2017-03-16 ENCODE 3, 4 ENCFF975IRM 971631 ENCODE Processing Pipeline e86acf5f0abe949a017dbdaff76a553d https://www.encodeproject.org/files/ENCFF068OGU/@@download/ENCFF068OGU.bigBed hg19 released low read depth, mild to moderate bottlenecking ENCFF940IER bigWig signal p-value ENCSR670JDQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens RB1-human ENCAB000BFB DNA False 2017-03-16 ENCODE 3, 4 ENCFF459MNI, ENCFF706XFF, ENCFF720AUK, ENCFF796JTX 1646904856 ENCODE Processing Pipeline c415ffa3035ac211626d2db7c0700e23 https://www.encodeproject.org/files/ENCFF940IER/@@download/ENCFF940IER.bigWig GRCh38 released low read depth, mild to moderate bottlenecking ENCFF169OTC bigWig fold change over control ENCSR670JDQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens RB1-human ENCAB000BFB DNA False 2017-03-16 ENCODE 3, 4 ENCFF459MNI, ENCFF706XFF, ENCFF720AUK, ENCFF796JTX 1719002893 ENCODE Processing Pipeline 23b7323c8ea92d36c681adcea4135b5f https://www.encodeproject.org/files/ENCFF169OTC/@@download/ENCFF169OTC.bigWig GRCh38 released low read depth, mild to moderate bottlenecking ENCFF456ZUZ bigWig fold change over control ENCSR670JDQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens RB1-human ENCAB000BFB DNA False 2017-03-16 ENCODE 4 ENCFF459MNI, ENCFF720AUK, ENCFF796JTX 1185754656 ENCODE Processing Pipeline 9418a23b3345c38688ba283f15bc16cf https://www.encodeproject.org/files/ENCFF456ZUZ/@@download/ENCFF456ZUZ.bigWig GRCh38 released low read depth, mild to moderate bottlenecking ENCFF036GCO bed narrowPeak peaks ENCSR670JDQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens RB1-human ENCAB000BFB DNA False 2017-03-16 ENCODE 3 ENCFF706XFF, ENCFF720AUK, ENCFF796JTX 5929424 ENCODE Processing Pipeline 58be04e03165c4566bde3eea49f1d475 https://www.encodeproject.org/files/ENCFF036GCO/@@download/ENCFF036GCO.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking ENCFF651LFT bed narrowPeak peaks ENCSR670JDQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens RB1-human ENCAB000BFB DNA False 2017-03-16 ENCODE 4 ENCFF459MNI, ENCFF720AUK, ENCFF796JTX 6432840 ENCODE Processing Pipeline a651a82f989ca268b25ebbb200137b0f https://www.encodeproject.org/files/ENCFF651LFT/@@download/ENCFF651LFT.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking ENCFF115DWC bed narrowPeak peaks ENCSR670JDQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens RB1-human ENCAB000BFB DNA False 2017-03-16 ENCODE 3, 4 ENCFF459MNI, ENCFF706XFF, ENCFF720AUK, ENCFF796JTX 7015551 ENCODE Processing Pipeline 9a28e354d7e74c16028201b4f9c6f099 https://www.encodeproject.org/files/ENCFF115DWC/@@download/ENCFF115DWC.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking ENCFF751TCJ bigBed narrowPeak peaks ENCSR670JDQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens RB1-human ENCAB000BFB DNA False 2017-03-16 ENCODE 3 ENCFF036GCO 11402275 ENCODE Processing Pipeline c4719f2bce214f9b4497b6022a9124ae https://www.encodeproject.org/files/ENCFF751TCJ/@@download/ENCFF751TCJ.bigBed GRCh38 released low read depth, mild to moderate bottlenecking ENCFF944ZFL bigWig signal p-value ENCSR670JDQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens RB1-human ENCAB000BFB DNA False 2017-03-16 ENCODE 4 ENCFF459MNI, ENCFF720AUK, ENCFF796JTX 1304560103 ENCODE Processing Pipeline ea6bdb1537d035f1f25a63d52e6918fe https://www.encodeproject.org/files/ENCFF944ZFL/@@download/ENCFF944ZFL.bigWig GRCh38 released low read depth, mild to moderate bottlenecking ENCFF188HKC bigWig signal p-value ENCSR670JDQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens RB1-human ENCAB000BFB DNA False 2017-03-16 ENCODE 3 ENCFF706XFF, ENCFF720AUK, ENCFF796JTX 1176156755 ENCODE Processing Pipeline beb41a8248562fd1411e7c0d11e038d0 https://www.encodeproject.org/files/ENCFF188HKC/@@download/ENCFF188HKC.bigWig GRCh38 released low read depth, mild to moderate bottlenecking ENCFF675CXL bigWig fold change over control ENCSR670JDQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens RB1-human ENCAB000BFB DNA False 2017-03-16 ENCODE 3 ENCFF706XFF, ENCFF720AUK, ENCFF796JTX 1122887072 ENCODE Processing Pipeline 55f0e8fdca37e20340ab694ef96dc316 https://www.encodeproject.org/files/ENCFF675CXL/@@download/ENCFF675CXL.bigWig GRCh38 released low read depth, mild to moderate bottlenecking ENCFF124NBN bed narrowPeak conservative idr thresholded peaks ENCSR670JDQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens RB1-human ENCAB000BFB DNA False 2017-03-16 ENCODE 3, 4 ENCFF036GCO, ENCFF115DWC, ENCFF419RSJ, ENCFF651LFT 395542 ENCODE Processing Pipeline 342c028380b0ae5e674af8f89e26a152 https://www.encodeproject.org/files/ENCFF124NBN/@@download/ENCFF124NBN.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking ENCFF204ALA bigBed narrowPeak peaks ENCSR670JDQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens RB1-human ENCAB000BFB DNA False 2017-03-16 ENCODE 3, 4 ENCFF115DWC 13278055 ENCODE Processing Pipeline 71c081031045e514f90ed9f19dd62ba1 https://www.encodeproject.org/files/ENCFF204ALA/@@download/ENCFF204ALA.bigBed GRCh38 released low read depth, mild to moderate bottlenecking ENCFF903SWK bigBed narrowPeak conservative idr thresholded peaks ENCSR670JDQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens RB1-human ENCAB000BFB DNA False 2017-03-16 ENCODE 3, 4 ENCFF124NBN 851424 ENCODE Processing Pipeline 064a18469d9a1f758e09b2ce8b47ef78 https://www.encodeproject.org/files/ENCFF903SWK/@@download/ENCFF903SWK.bigBed GRCh38 released low read depth, mild to moderate bottlenecking ENCFF625JCE bigBed narrowPeak optimal idr thresholded peaks ENCSR670JDQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens RB1-human ENCAB000BFB DNA False 2017-03-16 ENCODE 3, 4 ENCFF328QZM 977878 ENCODE Processing Pipeline e1984458609bf8debb23dc3ea24fd2e3 https://www.encodeproject.org/files/ENCFF625JCE/@@download/ENCFF625JCE.bigBed GRCh38 released low read depth, mild to moderate bottlenecking ENCFF595MNU bigBed narrowPeak peaks ENCSR670JDQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens RB1-human ENCAB000BFB DNA False 2017-03-16 ENCODE 4 ENCFF651LFT 13407510 ENCODE Processing Pipeline bbe6615b1a162f1dd7c18f14ba3d0a50 https://www.encodeproject.org/files/ENCFF595MNU/@@download/ENCFF595MNU.bigBed GRCh38 released low read depth, mild to moderate bottlenecking ENCFF441NRT bam unfiltered alignments ENCSR314BBS ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-PTTG1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 2 100 ENCFF349DXW, ENCFF660MJG, ENCFF807MUK 5039918311 ENCODE Processing Pipeline faf7934ca25e596b004857eb5c55852a https://www.encodeproject.org/files/ENCFF441NRT/@@download/ENCFF441NRT.bam hg19 released missing genetic modification characterization, low read depth, mild to moderate bottlenecking ENCFF320XMR bam unfiltered alignments ENCSR314BBS ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-PTTG1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1 100 ENCFF277CCO, ENCFF529BRM, ENCFF807MUK 4054806967 ENCODE Processing Pipeline 4e5c18b43e15553e69bc79c265f5a837 https://www.encodeproject.org/files/ENCFF320XMR/@@download/ENCFF320XMR.bam hg19 released missing genetic modification characterization, low read depth, mild to moderate bottlenecking ENCFF349DXW fastq reads ENCSR314BBS ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-PTTG1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 2 1 100 paired-ended 1 ENCFF660MJG 2222208371 Michael Snyder, Stanford 3cddd6f9861a03e552067fabc4c15bd4 SRA:SRR5111420 https://www.encodeproject.org/files/ENCFF349DXW/@@download/ENCFF349DXW.fastq.gz Illumina HiSeq 2000 /files/ENCFF760WPA/ released missing genetic modification characterization, low read depth, mild to moderate bottlenecking ENCFF277CCO fastq reads ENCSR314BBS ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-PTTG1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1 1 100 paired-ended 2 ENCFF529BRM 1842084903 Michael Snyder, Stanford e39cc7598bd71c76b9ed2239f2fa5896 SRA:SRR5111421 https://www.encodeproject.org/files/ENCFF277CCO/@@download/ENCFF277CCO.fastq.gz Illumina HiSeq 2000 /files/ENCFF950USL/ released missing genetic modification characterization, low read depth, mild to moderate bottlenecking ENCFF660MJG fastq reads ENCSR314BBS ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-PTTG1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 2 1 100 paired-ended 2 ENCFF349DXW 2381079346 Michael Snyder, Stanford c0e90118477f05b270f36d7a4a483c00 SRA:SRR5111420 https://www.encodeproject.org/files/ENCFF660MJG/@@download/ENCFF660MJG.fastq.gz Illumina HiSeq 2000 /files/ENCFF950USL/ released missing genetic modification characterization, low read depth, mild to moderate bottlenecking ENCFF529BRM fastq reads ENCSR314BBS ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-PTTG1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1 1 100 paired-ended 1 ENCFF277CCO 1781896662 Michael Snyder, Stanford 3a8ed29e7c367b506271cdb0914417cc SRA:SRR5111421 https://www.encodeproject.org/files/ENCFF529BRM/@@download/ENCFF529BRM.fastq.gz Illumina HiSeq 2000 /files/ENCFF760WPA/ released missing genetic modification characterization, low read depth, mild to moderate bottlenecking ENCFF860REV bam alignments ENCSR314BBS ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-PTTG1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1 100 ENCFF277CCO, ENCFF529BRM, ENCFF807MUK 3235888168 ENCODE Processing Pipeline d59992f3f536c1b6f3fb1ac5a6415cbe https://www.encodeproject.org/files/ENCFF860REV/@@download/ENCFF860REV.bam hg19 released missing genetic modification characterization, low read depth, mild to moderate bottlenecking ENCFF400FDW bam alignments ENCSR314BBS ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-PTTG1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 2 100 ENCFF349DXW, ENCFF660MJG, ENCFF807MUK 4096252330 ENCODE Processing Pipeline 0f488a08976baae851e5279618817f3b https://www.encodeproject.org/files/ENCFF400FDW/@@download/ENCFF400FDW.bam hg19 released missing genetic modification characterization, low read depth, mild to moderate bottlenecking ENCFF283GJL bigWig signal p-value ENCSR314BBS ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-PTTG1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1 ENCFF124STW, ENCFF860REV 927509629 ENCODE Processing Pipeline 5b7d757f561d87bb7107b421fdd7d8fe https://www.encodeproject.org/files/ENCFF283GJL/@@download/ENCFF283GJL.bigWig hg19 released missing genetic modification characterization, low read depth, mild to moderate bottlenecking ENCFF169NAG bigWig signal p-value ENCSR314BBS ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-PTTG1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 2 ENCFF124STW, ENCFF400FDW 929120170 ENCODE Processing Pipeline 269069d817a3a46e80e4f77101a07840 https://www.encodeproject.org/files/ENCFF169NAG/@@download/ENCFF169NAG.bigWig hg19 released missing genetic modification characterization, low read depth, mild to moderate bottlenecking ENCFF897WDU bigWig signal p-value ENCSR314BBS ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-PTTG1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF124STW, ENCFF400FDW, ENCFF860REV 1124505543 ENCODE Processing Pipeline 924fca83fa23609c9566414d47990ec5 https://www.encodeproject.org/files/ENCFF897WDU/@@download/ENCFF897WDU.bigWig hg19 released missing genetic modification characterization, low read depth, mild to moderate bottlenecking ENCFF785XZC bigWig fold change over control ENCSR314BBS ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-PTTG1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1 ENCFF124STW, ENCFF860REV 874720448 ENCODE Processing Pipeline 62c95a575c980f455fa206befb9d6747 https://www.encodeproject.org/files/ENCFF785XZC/@@download/ENCFF785XZC.bigWig hg19 released missing genetic modification characterization, low read depth, mild to moderate bottlenecking ENCFF760VSW bigWig fold change over control ENCSR314BBS ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-PTTG1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 2 ENCFF124STW, ENCFF400FDW 969100650 ENCODE Processing Pipeline 66777b0f17202406358852f56a164f3d https://www.encodeproject.org/files/ENCFF760VSW/@@download/ENCFF760VSW.bigWig hg19 released missing genetic modification characterization, low read depth, mild to moderate bottlenecking ENCFF981LHO bed narrowPeak peaks ENCSR314BBS ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-PTTG1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1 ENCFF124STW, ENCFF860REV 5953388 ENCODE Processing Pipeline 20b265d3d51a939bbb83700dca54c959 https://www.encodeproject.org/files/ENCFF981LHO/@@download/ENCFF981LHO.bed.gz hg19 released missing genetic modification characterization, low read depth, mild to moderate bottlenecking ENCFF997ETO bigWig fold change over control ENCSR314BBS ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-PTTG1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF124STW, ENCFF400FDW, ENCFF860REV 1414624457 ENCODE Processing Pipeline a66d58438be0084e7987c25fac27c840 https://www.encodeproject.org/files/ENCFF997ETO/@@download/ENCFF997ETO.bigWig hg19 released missing genetic modification characterization, low read depth, mild to moderate bottlenecking ENCFF351JUL bed narrowPeak peaks ENCSR314BBS ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-PTTG1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF124STW, ENCFF400FDW, ENCFF860REV 6972262 ENCODE Processing Pipeline e0d0cbad321bdcda11cb355184863281 https://www.encodeproject.org/files/ENCFF351JUL/@@download/ENCFF351JUL.bed.gz hg19 released missing genetic modification characterization, low read depth, mild to moderate bottlenecking ENCFF065BIE bigBed narrowPeak peaks ENCSR314BBS ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-PTTG1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF351JUL 13244308 ENCODE Processing Pipeline b297aab337bd4f0b1e72cb0c0c285b1e https://www.encodeproject.org/files/ENCFF065BIE/@@download/ENCFF065BIE.bigBed hg19 released missing genetic modification characterization, low read depth, mild to moderate bottlenecking ENCFF069PPO bed narrowPeak peaks ENCSR314BBS ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-PTTG1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 2 ENCFF124STW, ENCFF400FDW 6175393 ENCODE Processing Pipeline 6641e81b3eae2a5e024312e55a53bba0 https://www.encodeproject.org/files/ENCFF069PPO/@@download/ENCFF069PPO.bed.gz hg19 released missing genetic modification characterization, low read depth, mild to moderate bottlenecking ENCFF062ZTH bigBed narrowPeak peaks ENCSR314BBS ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-PTTG1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 2 ENCFF069PPO 11174584 ENCODE Processing Pipeline ce85eb0023fab05532f98b678d23089a https://www.encodeproject.org/files/ENCFF062ZTH/@@download/ENCFF062ZTH.bigBed hg19 released missing genetic modification characterization, low read depth, mild to moderate bottlenecking ENCFF637RAZ bigBed narrowPeak peaks ENCSR314BBS ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-PTTG1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1 ENCFF981LHO 11238617 ENCODE Processing Pipeline b139b4088efbdce744eef1ec9d171106 https://www.encodeproject.org/files/ENCFF637RAZ/@@download/ENCFF637RAZ.bigBed hg19 released missing genetic modification characterization, low read depth, mild to moderate bottlenecking ENCFF102GIR bam unfiltered alignments ENCSR314BBS ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-PTTG1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1 100 ENCFF277CCO, ENCFF529BRM, ENCFF643CGH 4062223023 ENCODE Processing Pipeline 3db60e29d3f17664ce80e0f31122ce0a https://www.encodeproject.org/files/ENCFF102GIR/@@download/ENCFF102GIR.bam GRCh38 released missing genetic modification characterization, low read depth, mild to moderate bottlenecking ENCFF109QZW bam unfiltered alignments ENCSR314BBS ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-PTTG1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 2 100 ENCFF349DXW, ENCFF643CGH, ENCFF660MJG 5047240773 ENCODE Processing Pipeline 6c7db2c12dd80074f843423c3a4d5d58 https://www.encodeproject.org/files/ENCFF109QZW/@@download/ENCFF109QZW.bam GRCh38 released missing genetic modification characterization, low read depth, mild to moderate bottlenecking ENCFF586KRI bam alignments ENCSR314BBS ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-PTTG1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1 100 ENCFF277CCO, ENCFF529BRM, ENCFF643CGH 3237648557 ENCODE Processing Pipeline 2041b4b35a91ac18080a08e8887b9813 https://www.encodeproject.org/files/ENCFF586KRI/@@download/ENCFF586KRI.bam GRCh38 released missing genetic modification characterization, low read depth, mild to moderate bottlenecking ENCFF662KUU bam alignments ENCSR314BBS ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-PTTG1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 2 100 ENCFF349DXW, ENCFF643CGH, ENCFF660MJG 4098492067 ENCODE Processing Pipeline f6eb048a098852b21210333aa501f732 https://www.encodeproject.org/files/ENCFF662KUU/@@download/ENCFF662KUU.bam GRCh38 released missing genetic modification characterization, low read depth, mild to moderate bottlenecking ENCFF936MJV bigWig signal p-value ENCSR314BBS ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-PTTG1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1 ENCFF586KRI, ENCFF898KHD 743932844 ENCODE Processing Pipeline 8202a7a9b8a831a18a1646df9572c99b https://www.encodeproject.org/files/ENCFF936MJV/@@download/ENCFF936MJV.bigWig GRCh38 released missing genetic modification characterization, low read depth, mild to moderate bottlenecking ENCFF473HJO bigWig signal p-value ENCSR314BBS ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-PTTG1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 2 ENCFF662KUU, ENCFF898KHD 919338951 ENCODE Processing Pipeline 625121dc021d51503f8d3cd3617c66b2 https://www.encodeproject.org/files/ENCFF473HJO/@@download/ENCFF473HJO.bigWig GRCh38 released missing genetic modification characterization, low read depth, mild to moderate bottlenecking ENCFF989JQZ bigWig signal p-value ENCSR314BBS ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-PTTG1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF586KRI, ENCFF662KUU, ENCFF898KHD 1126997553 ENCODE Processing Pipeline 92141a6d3c6832e0ecf1b07136626836 https://www.encodeproject.org/files/ENCFF989JQZ/@@download/ENCFF989JQZ.bigWig GRCh38 released missing genetic modification characterization, low read depth, mild to moderate bottlenecking ENCFF923BHW bigWig fold change over control ENCSR314BBS ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-PTTG1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1 ENCFF586KRI, ENCFF898KHD 883918710 ENCODE Processing Pipeline 42cf8a8f0db267b0beca2fcfd5904872 https://www.encodeproject.org/files/ENCFF923BHW/@@download/ENCFF923BHW.bigWig GRCh38 released missing genetic modification characterization, low read depth, mild to moderate bottlenecking ENCFF563KWV bigWig fold change over control ENCSR314BBS ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-PTTG1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 2 ENCFF662KUU, ENCFF898KHD 976426066 ENCODE Processing Pipeline da0edbe0db98fcc4fd1faf606c0c13f5 https://www.encodeproject.org/files/ENCFF563KWV/@@download/ENCFF563KWV.bigWig GRCh38 released missing genetic modification characterization, low read depth, mild to moderate bottlenecking ENCFF570CAT bigWig fold change over control ENCSR314BBS ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-PTTG1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF586KRI, ENCFF662KUU, ENCFF898KHD 1415072974 ENCODE Processing Pipeline 532d5d965dae82be99472cbf4f64178e https://www.encodeproject.org/files/ENCFF570CAT/@@download/ENCFF570CAT.bigWig GRCh38 released missing genetic modification characterization, low read depth, mild to moderate bottlenecking ENCFF235HIP bed narrowPeak peaks ENCSR314BBS ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-PTTG1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF586KRI, ENCFF662KUU, ENCFF898KHD 6862390 ENCODE Processing Pipeline a58c3dfb906f93014f62c68595b938cc https://www.encodeproject.org/files/ENCFF235HIP/@@download/ENCFF235HIP.bed.gz GRCh38 released missing genetic modification characterization, low read depth, mild to moderate bottlenecking ENCFF041ATK bed narrowPeak peaks ENCSR314BBS ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-PTTG1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1 ENCFF586KRI, ENCFF898KHD 5806562 ENCODE Processing Pipeline e2b7ca1ee767ebdb89591f59e8053eca https://www.encodeproject.org/files/ENCFF041ATK/@@download/ENCFF041ATK.bed.gz GRCh38 released missing genetic modification characterization, low read depth, mild to moderate bottlenecking ENCFF841XAB bed narrowPeak peaks ENCSR314BBS ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-PTTG1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 2 ENCFF662KUU, ENCFF898KHD 6016291 ENCODE Processing Pipeline 9cd3ff136e0f576a3ef7523933153408 https://www.encodeproject.org/files/ENCFF841XAB/@@download/ENCFF841XAB.bed.gz GRCh38 released missing genetic modification characterization, low read depth, mild to moderate bottlenecking ENCFF597SRV bigBed narrowPeak peaks ENCSR314BBS ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-PTTG1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1 ENCFF041ATK 11234334 ENCODE Processing Pipeline 206c855cee4acb983248d32f1a85aff9 https://www.encodeproject.org/files/ENCFF597SRV/@@download/ENCFF597SRV.bigBed GRCh38 released missing genetic modification characterization, low read depth, mild to moderate bottlenecking ENCFF736KJH bigBed narrowPeak peaks ENCSR314BBS ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-PTTG1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 2 ENCFF841XAB 11181506 ENCODE Processing Pipeline 48d485b662610ff14db30d73f70ea36f https://www.encodeproject.org/files/ENCFF736KJH/@@download/ENCFF736KJH.bigBed GRCh38 released missing genetic modification characterization, low read depth, mild to moderate bottlenecking ENCFF395KZN bigBed narrowPeak peaks ENCSR314BBS ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-PTTG1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF235HIP 13257708 ENCODE Processing Pipeline a4450567073883eecc2007fea4f41a9c https://www.encodeproject.org/files/ENCFF395KZN/@@download/ENCFF395KZN.bigBed GRCh38 released missing genetic modification characterization, low read depth, mild to moderate bottlenecking ENCFF803HUH bed narrowPeak conservative idr thresholded peaks ENCSR314BBS ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-PTTG1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF041ATK, ENCFF235HIP, ENCFF419RSJ, ENCFF841XAB 79132 ENCODE Processing Pipeline b1d1973297dd68897052bef9c5f1efb3 https://www.encodeproject.org/files/ENCFF803HUH/@@download/ENCFF803HUH.bed.gz GRCh38 released missing genetic modification characterization, low read depth, mild to moderate bottlenecking ENCFF498POS bigBed narrowPeak conservative idr thresholded peaks ENCSR314BBS ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-PTTG1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF803HUH 210798 ENCODE Processing Pipeline 355a1832d6f3121ae2111258c3f47c0c https://www.encodeproject.org/files/ENCFF498POS/@@download/ENCFF498POS.bigBed GRCh38 released missing genetic modification characterization, low read depth, mild to moderate bottlenecking ENCFF587PBU bed narrowPeak optimal idr thresholded peaks ENCSR314BBS ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-PTTG1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF041ATK, ENCFF235HIP, ENCFF419RSJ, ENCFF841XAB 87923 ENCODE Processing Pipeline 89af7748e051ca3be492460952e50e39 https://www.encodeproject.org/files/ENCFF587PBU/@@download/ENCFF587PBU.bed.gz GRCh38 released missing genetic modification characterization, low read depth, mild to moderate bottlenecking ENCFF438ZXV bigBed narrowPeak optimal idr thresholded peaks ENCSR314BBS ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-PTTG1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF587PBU 224366 ENCODE Processing Pipeline 02ad3173d82aee2c351c72f642ee27f1 https://www.encodeproject.org/files/ENCFF438ZXV/@@download/ENCFF438ZXV.bigBed GRCh38 released missing genetic modification characterization, low read depth, mild to moderate bottlenecking ENCFF332DRG bed narrowPeak optimal idr thresholded peaks ENCSR314BBS ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-PTTG1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF001TDO, ENCFF069PPO, ENCFF351JUL, ENCFF981LHO 86566 ENCODE Processing Pipeline 1e20dd325116baacb561791a59333622 https://www.encodeproject.org/files/ENCFF332DRG/@@download/ENCFF332DRG.bed.gz hg19 released missing genetic modification characterization, low read depth, mild to moderate bottlenecking ENCFF055DBO bigBed narrowPeak conservative idr thresholded peaks ENCSR314BBS ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-PTTG1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF320ZVD 158059 ENCODE Processing Pipeline 0875c301e62a4525734dec609b6f395a https://www.encodeproject.org/files/ENCFF055DBO/@@download/ENCFF055DBO.bigBed hg19 released missing genetic modification characterization, low read depth, mild to moderate bottlenecking ENCFF320ZVD bed narrowPeak conservative idr thresholded peaks ENCSR314BBS ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-PTTG1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF001TDO, ENCFF069PPO, ENCFF351JUL, ENCFF981LHO 65637 ENCODE Processing Pipeline d2a7ec45263ca5b3e3377e81acd82e71 https://www.encodeproject.org/files/ENCFF320ZVD/@@download/ENCFF320ZVD.bed.gz hg19 released missing genetic modification characterization, low read depth, mild to moderate bottlenecking ENCFF139WSC bigBed narrowPeak optimal idr thresholded peaks ENCSR314BBS ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-PTTG1-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF332DRG 184456 ENCODE Processing Pipeline 3396189ef51e776a40c8a477bd0d5a93 https://www.encodeproject.org/files/ENCFF139WSC/@@download/ENCFF139WSC.bigBed hg19 released missing genetic modification characterization, low read depth, mild to moderate bottlenecking ENCFF153XNI bam unfiltered alignments ENCSR782WRO ChIP-seq EFO:0002067 K562 cell line Homo sapiens BMI1-human ENCAB000BDV DNA False 2014-07-07 ENCODE 2 36 ENCFF002EEX, ENCFF807MUK 1200539167 ENCODE Processing Pipeline b8dcc7a54c8a975f8cf8ae91c8f8eff0 https://www.encodeproject.org/files/ENCFF153XNI/@@download/ENCFF153XNI.bam hg19 released borderline replicate concordance, low read length ENCFF553HCB bam unfiltered alignments ENCSR782WRO ChIP-seq EFO:0002067 K562 cell line Homo sapiens BMI1-human ENCAB000BDV DNA False 2014-07-07 ENCODE 1 36 ENCFF002EEY, ENCFF807MUK 1339498935 ENCODE Processing Pipeline 2e1a2c0041366b180b041bb4fd2fb0ff https://www.encodeproject.org/files/ENCFF553HCB/@@download/ENCFF553HCB.bam hg19 released borderline replicate concordance, low read length ENCFF836FYL bigWig signal p-value ENCSR782WRO ChIP-seq EFO:0002067 K562 cell line Homo sapiens BMI1-human ENCAB000BDV DNA False 2014-07-07 ENCODE 1 ENCFF136XHP, ENCFF335IPE 564808823 ENCODE Processing Pipeline 6239d5df603979f72af57ea00d756f5f https://www.encodeproject.org/files/ENCFF836FYL/@@download/ENCFF836FYL.bigWig hg19 released borderline replicate concordance, low read length ENCFF592UTJ bigWig fold change over control ENCSR782WRO ChIP-seq EFO:0002067 K562 cell line Homo sapiens BMI1-human ENCAB000BDV DNA False 2014-07-07 ENCODE 1 ENCFF136XHP, ENCFF335IPE 511591022 ENCODE Processing Pipeline 5e894d779745c5adf2b91c1cdd902da2 https://www.encodeproject.org/files/ENCFF592UTJ/@@download/ENCFF592UTJ.bigWig hg19 released borderline replicate concordance, low read length ENCFF414IYE bigWig signal p-value ENCSR782WRO ChIP-seq EFO:0002067 K562 cell line Homo sapiens BMI1-human ENCAB000BDV DNA False 2014-07-07 ENCODE 2 ENCFF355RGO, ENCFF879OQC 477616534 ENCODE Processing Pipeline 49c9f0e6595dda82f7919572040a1587 https://www.encodeproject.org/files/ENCFF414IYE/@@download/ENCFF414IYE.bigWig hg19 released borderline replicate concordance, low read length ENCFF866MJE bigWig signal p-value ENCSR782WRO ChIP-seq EFO:0002067 K562 cell line Homo sapiens BMI1-human ENCAB000BDV DNA False 2014-07-07 ENCODE 1, 2 ENCFF136XHP, ENCFF335IPE, ENCFF355RGO, ENCFF879OQC 939745923 ENCODE Processing Pipeline 598f15a387877b9ab2a278d07f9cde48 https://www.encodeproject.org/files/ENCFF866MJE/@@download/ENCFF866MJE.bigWig hg19 released borderline replicate concordance, low read length ENCFF336FET bigWig fold change over control ENCSR782WRO ChIP-seq EFO:0002067 K562 cell line Homo sapiens BMI1-human ENCAB000BDV DNA False 2014-07-07 ENCODE 2 ENCFF355RGO, ENCFF879OQC 487856683 ENCODE Processing Pipeline 2021cf819678f8b00618663c625913b8 https://www.encodeproject.org/files/ENCFF336FET/@@download/ENCFF336FET.bigWig hg19 released borderline replicate concordance, low read length ENCFF186JXU bed narrowPeak peaks ENCSR782WRO ChIP-seq EFO:0002067 K562 cell line Homo sapiens BMI1-human ENCAB000BDV DNA False 2014-07-07 ENCODE 2 ENCFF355RGO, ENCFF879OQC 4948567 ENCODE Processing Pipeline 265da055467795a7eaa2550983ccbd02 https://www.encodeproject.org/files/ENCFF186JXU/@@download/ENCFF186JXU.bed.gz hg19 released borderline replicate concordance, low read length ENCFF235ECP bigBed narrowPeak peaks ENCSR782WRO ChIP-seq EFO:0002067 K562 cell line Homo sapiens BMI1-human ENCAB000BDV DNA False 2014-07-07 ENCODE 1 ENCFF841ZJM 11013226 ENCODE Processing Pipeline 8a4c488b2dc9bd7262d721cdc2cfb075 https://www.encodeproject.org/files/ENCFF235ECP/@@download/ENCFF235ECP.bigBed hg19 released borderline replicate concordance, low read length ENCFF339WFE bigBed narrowPeak peaks ENCSR782WRO ChIP-seq EFO:0002067 K562 cell line Homo sapiens BMI1-human ENCAB000BDV DNA False 2014-07-07 ENCODE 1, 2 ENCFF594TUH 13433957 ENCODE Processing Pipeline 0c316a5c9297ff9174c0eb33c15f63a1 https://www.encodeproject.org/files/ENCFF339WFE/@@download/ENCFF339WFE.bigBed hg19 released borderline replicate concordance, low read length ENCFF514QBY bigWig fold change over control ENCSR782WRO ChIP-seq EFO:0002067 K562 cell line Homo sapiens BMI1-human ENCAB000BDV DNA False 2014-07-07 ENCODE 1, 2 ENCFF136XHP, ENCFF335IPE, ENCFF355RGO, ENCFF879OQC 1070239988 ENCODE Processing Pipeline 88f090a1d17ef93318bca5157e085a60 https://www.encodeproject.org/files/ENCFF514QBY/@@download/ENCFF514QBY.bigWig hg19 released borderline replicate concordance, low read length ENCFF594TUH bed narrowPeak peaks ENCSR782WRO ChIP-seq EFO:0002067 K562 cell line Homo sapiens BMI1-human ENCAB000BDV DNA False 2014-07-07 ENCODE 1, 2 ENCFF136XHP, ENCFF335IPE, ENCFF355RGO, ENCFF879OQC 6397068 ENCODE Processing Pipeline 82273fc91909318a5c18f1a98af9a88f https://www.encodeproject.org/files/ENCFF594TUH/@@download/ENCFF594TUH.bed.gz hg19 released borderline replicate concordance, low read length ENCFF733YYF bigBed narrowPeak peaks ENCSR782WRO ChIP-seq EFO:0002067 K562 cell line Homo sapiens BMI1-human ENCAB000BDV DNA False 2014-07-07 ENCODE 2 ENCFF186JXU 10981798 ENCODE Processing Pipeline 7ac4fa62c9e86a04cb51322e10432b05 https://www.encodeproject.org/files/ENCFF733YYF/@@download/ENCFF733YYF.bigBed hg19 released borderline replicate concordance, low read length ENCFF259NPX bed narrowPeak conservative idr thresholded peaks ENCSR782WRO ChIP-seq EFO:0002067 K562 cell line Homo sapiens BMI1-human ENCAB000BDV DNA False 2014-07-07 ENCODE 1, 2 ENCFF001TDO, ENCFF186JXU, ENCFF594TUH, ENCFF841ZJM 38228 ENCODE Processing Pipeline a64123622ef4b94c7a67fb3b5120e4db https://www.encodeproject.org/files/ENCFF259NPX/@@download/ENCFF259NPX.bed.gz hg19 released borderline replicate concordance, low read length ENCFF841ZJM bed narrowPeak peaks ENCSR782WRO ChIP-seq EFO:0002067 K562 cell line Homo sapiens BMI1-human ENCAB000BDV DNA False 2014-07-07 ENCODE 1 ENCFF136XHP, ENCFF335IPE 4896452 ENCODE Processing Pipeline aaa5da43b96e4c70a786ea337a51f0ee https://www.encodeproject.org/files/ENCFF841ZJM/@@download/ENCFF841ZJM.bed.gz hg19 released borderline replicate concordance, low read length ENCFF811XCV bigBed narrowPeak conservative idr thresholded peaks ENCSR782WRO ChIP-seq EFO:0002067 K562 cell line Homo sapiens BMI1-human ENCAB000BDV DNA False 2014-07-07 ENCODE 1, 2 ENCFF259NPX 122835 ENCODE Processing Pipeline b507098e2bf69519cb04ce51f3d3d53a https://www.encodeproject.org/files/ENCFF811XCV/@@download/ENCFF811XCV.bigBed hg19 released borderline replicate concordance, low read length ENCFF048OIZ bed narrowPeak optimal idr thresholded peaks ENCSR782WRO ChIP-seq EFO:0002067 K562 cell line Homo sapiens BMI1-human ENCAB000BDV DNA False 2014-07-07 ENCODE 1, 2 ENCFF001TDO, ENCFF186JXU, ENCFF594TUH, ENCFF841ZJM 51870 ENCODE Processing Pipeline 0b13df6bf0e0f44b245b86c92814e49f https://www.encodeproject.org/files/ENCFF048OIZ/@@download/ENCFF048OIZ.bed.gz hg19 released borderline replicate concordance, low read length ENCFF002EEX fastq reads ENCSR782WRO ChIP-seq EFO:0002067 K562 cell line Homo sapiens BMI1-human ENCAB000BDV DNA False 2014-07-07 ENCODE 2 1 36 single-ended 828314629 Michael Snyder, Stanford a33ad8d74eb56a7c8a236ed9f9ee6cb4 SRA:SRR5112109 https://www.encodeproject.org/files/ENCFF002EEX/@@download/ENCFF002EEX.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF002ECS/ released borderline replicate concordance, low read length ENCFF002EEY fastq reads ENCSR782WRO ChIP-seq EFO:0002067 K562 cell line Homo sapiens BMI1-human ENCAB000BDV DNA False 2014-07-07 ENCODE 1 1 36 single-ended 933764346 Michael Snyder, Stanford 87c252b7796d3dc8da76873a863b89e8 SRA:SRR5112108 https://www.encodeproject.org/files/ENCFF002EEY/@@download/ENCFF002EEY.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF002ECW/ released borderline replicate concordance, low read length ENCFF117LYG bigBed narrowPeak optimal idr thresholded peaks ENCSR782WRO ChIP-seq EFO:0002067 K562 cell line Homo sapiens BMI1-human ENCAB000BDV DNA False 2014-07-07 ENCODE 1, 2 ENCFF048OIZ 142306 ENCODE Processing Pipeline caa280246c00dc508b4797bd94ffad2a https://www.encodeproject.org/files/ENCFF117LYG/@@download/ENCFF117LYG.bigBed hg19 released borderline replicate concordance, low read length ENCFF355RGO bam alignments ENCSR782WRO ChIP-seq EFO:0002067 K562 cell line Homo sapiens BMI1-human ENCAB000BDV DNA False 2014-07-07 ENCODE 2 36 ENCFF002EEX, ENCFF807MUK 830360165 ENCODE Processing Pipeline 9585cb1ef9f7ecc6e3cd52706bfbb946 https://www.encodeproject.org/files/ENCFF355RGO/@@download/ENCFF355RGO.bam hg19 released borderline replicate concordance, low read length ENCFF136XHP bam alignments ENCSR782WRO ChIP-seq EFO:0002067 K562 cell line Homo sapiens BMI1-human ENCAB000BDV DNA False 2014-07-07 ENCODE 1 36 ENCFF002EEY, ENCFF807MUK 951731022 ENCODE Processing Pipeline e1a5dc84147aeef7d01f31849fdf3e5a https://www.encodeproject.org/files/ENCFF136XHP/@@download/ENCFF136XHP.bam hg19 released borderline replicate concordance, low read length ENCFF916KIG bigWig signal p-value ENCSR782WRO ChIP-seq EFO:0002067 K562 cell line Homo sapiens BMI1-human ENCAB000BDV DNA False 2014-07-07 ENCODE 1 ENCFF136XHP, ENCFF335IPE 559527715 ENCODE Processing Pipeline d4348d62b9ba5ca668da5d0d99be7d83 https://www.encodeproject.org/files/ENCFF916KIG/@@download/ENCFF916KIG.bigWig hg19 archived borderline replicate concordance, low read length ENCFF091CXO bigWig signal p-value ENCSR782WRO ChIP-seq EFO:0002067 K562 cell line Homo sapiens BMI1-human ENCAB000BDV DNA False 2014-07-07 ENCODE 2 ENCFF355RGO, ENCFF879OQC 478976443 ENCODE Processing Pipeline a58abd2b3dec3c6330cd42e373377b3e https://www.encodeproject.org/files/ENCFF091CXO/@@download/ENCFF091CXO.bigWig hg19 archived borderline replicate concordance, low read length ENCFF725FFJ bigWig signal p-value ENCSR782WRO ChIP-seq EFO:0002067 K562 cell line Homo sapiens BMI1-human ENCAB000BDV DNA False 2014-07-07 ENCODE 1, 2 ENCFF136XHP, ENCFF335IPE, ENCFF355RGO, ENCFF879OQC 954710507 ENCODE Processing Pipeline bba5e31c407e7d63edb6a0a1c8fe54df https://www.encodeproject.org/files/ENCFF725FFJ/@@download/ENCFF725FFJ.bigWig hg19 archived borderline replicate concordance, low read length ENCFF841CET bigWig fold change over control ENCSR782WRO ChIP-seq EFO:0002067 K562 cell line Homo sapiens BMI1-human ENCAB000BDV DNA False 2014-07-07 ENCODE 2 ENCFF355RGO, ENCFF879OQC 492025402 ENCODE Processing Pipeline 66f45f7f8a62b977b98a570f3806c713 https://www.encodeproject.org/files/ENCFF841CET/@@download/ENCFF841CET.bigWig hg19 archived borderline replicate concordance, low read length ENCFF533JJE bed narrowPeak peaks ENCSR782WRO ChIP-seq EFO:0002067 K562 cell line Homo sapiens BMI1-human ENCAB000BDV DNA False 2014-07-07 ENCODE 2 ENCFF355RGO, ENCFF879OQC 5168158 ENCODE Processing Pipeline 0a40f43f66e87af77fa6b37d4e25d8ca https://www.encodeproject.org/files/ENCFF533JJE/@@download/ENCFF533JJE.bed.gz hg19 archived borderline replicate concordance, low read length ENCFF836ZJA bigBed narrowPeak peaks ENCSR782WRO ChIP-seq EFO:0002067 K562 cell line Homo sapiens BMI1-human ENCAB000BDV DNA False 2014-07-07 ENCODE 1 ENCFF965OFQ 11132556 ENCODE Processing Pipeline 4cf728581e11cf318165ca2dcf7433b1 https://www.encodeproject.org/files/ENCFF836ZJA/@@download/ENCFF836ZJA.bigBed hg19 archived borderline replicate concordance, low read length ENCFF403FIE bigWig fold change over control ENCSR782WRO ChIP-seq EFO:0002067 K562 cell line Homo sapiens BMI1-human ENCAB000BDV DNA False 2014-07-07 ENCODE 1 ENCFF136XHP, ENCFF335IPE 501356081 ENCODE Processing Pipeline aca946f65e5083027e40c2f730106105 https://www.encodeproject.org/files/ENCFF403FIE/@@download/ENCFF403FIE.bigWig hg19 archived borderline replicate concordance, low read length ENCFF585JRW bed narrowPeak peaks ENCSR782WRO ChIP-seq EFO:0002067 K562 cell line Homo sapiens BMI1-human ENCAB000BDV DNA False 2014-07-07 ENCODE 1, 2 ENCFF136XHP, ENCFF335IPE, ENCFF355RGO, ENCFF879OQC 6606695 ENCODE Processing Pipeline 6bf3d8f04632c683cd7e18b182fce60b https://www.encodeproject.org/files/ENCFF585JRW/@@download/ENCFF585JRW.bed.gz hg19 archived borderline replicate concordance, low read length ENCFF424UYP bigWig fold change over control ENCSR782WRO ChIP-seq EFO:0002067 K562 cell line Homo sapiens BMI1-human ENCAB000BDV DNA False 2014-07-07 ENCODE 1, 2 ENCFF136XHP, ENCFF335IPE, ENCFF355RGO, ENCFF879OQC 1065996400 ENCODE Processing Pipeline 81c12f4db2d53c64a3757a41fe4ba923 https://www.encodeproject.org/files/ENCFF424UYP/@@download/ENCFF424UYP.bigWig hg19 archived borderline replicate concordance, low read length ENCFF105FZO bigBed narrowPeak peaks ENCSR782WRO ChIP-seq EFO:0002067 K562 cell line Homo sapiens BMI1-human ENCAB000BDV DNA False 2014-07-07 ENCODE 2 ENCFF533JJE 11100326 ENCODE Processing Pipeline 9b121db85a7d154146a200951bea04f2 https://www.encodeproject.org/files/ENCFF105FZO/@@download/ENCFF105FZO.bigBed hg19 archived borderline replicate concordance, low read length ENCFF020WDT bigBed narrowPeak peaks ENCSR782WRO ChIP-seq EFO:0002067 K562 cell line Homo sapiens BMI1-human ENCAB000BDV DNA False 2014-07-07 ENCODE 1, 2 ENCFF585JRW 13442385 ENCODE Processing Pipeline 0c69857ba3ab2363fb32e9f2e26c2ce3 https://www.encodeproject.org/files/ENCFF020WDT/@@download/ENCFF020WDT.bigBed hg19 archived borderline replicate concordance, low read length ENCFF965OFQ bed narrowPeak peaks ENCSR782WRO ChIP-seq EFO:0002067 K562 cell line Homo sapiens BMI1-human ENCAB000BDV DNA False 2014-07-07 ENCODE 1 ENCFF136XHP, ENCFF335IPE 5138333 ENCODE Processing Pipeline ccd55d8ab868c1c9d2233bbe675e6445 https://www.encodeproject.org/files/ENCFF965OFQ/@@download/ENCFF965OFQ.bed.gz hg19 archived borderline replicate concordance, low read length ENCFF163NLK bam unfiltered alignments ENCSR782WRO ChIP-seq EFO:0002067 K562 cell line Homo sapiens BMI1-human ENCAB000BDV DNA False 2014-07-07 ENCODE 2 36 ENCFF002EEX, ENCFF643CGH 1205856059 ENCODE Processing Pipeline ba6f4be32b7d76609c7ce011174f1bee https://www.encodeproject.org/files/ENCFF163NLK/@@download/ENCFF163NLK.bam GRCh38 released borderline replicate concordance, low read length ENCFF032TPO bam unfiltered alignments ENCSR782WRO ChIP-seq EFO:0002067 K562 cell line Homo sapiens BMI1-human ENCAB000BDV DNA False 2014-07-07 ENCODE 1 36 ENCFF002EEY, ENCFF643CGH 1345273481 ENCODE Processing Pipeline a12deeb5b79ca9fc81601e76ea23e628 https://www.encodeproject.org/files/ENCFF032TPO/@@download/ENCFF032TPO.bam GRCh38 released borderline replicate concordance, low read length ENCFF918CSI bam alignments ENCSR782WRO ChIP-seq EFO:0002067 K562 cell line Homo sapiens BMI1-human ENCAB000BDV DNA False 2014-07-07 ENCODE 2 36 ENCFF002EEX, ENCFF643CGH 829777510 ENCODE Processing Pipeline f14183f3f97b3d5125dc85ec8dd9e597 https://www.encodeproject.org/files/ENCFF918CSI/@@download/ENCFF918CSI.bam GRCh38 released borderline replicate concordance, low read length ENCFF110FDC bam alignments ENCSR782WRO ChIP-seq EFO:0002067 K562 cell line Homo sapiens BMI1-human ENCAB000BDV DNA False 2014-07-07 ENCODE 1 36 ENCFF002EEY, ENCFF643CGH 951086608 ENCODE Processing Pipeline f60eda69d0863bbdf45bfb6d8a454051 https://www.encodeproject.org/files/ENCFF110FDC/@@download/ENCFF110FDC.bam GRCh38 released borderline replicate concordance, low read length ENCFF533ZHY bigWig signal p-value ENCSR782WRO ChIP-seq EFO:0002067 K562 cell line Homo sapiens BMI1-human ENCAB000BDV DNA False 2014-07-07 ENCODE 1 ENCFF110FDC, ENCFF156FED 661298837 ENCODE Processing Pipeline 8c216110e1dcd93455f7150f563a82eb https://www.encodeproject.org/files/ENCFF533ZHY/@@download/ENCFF533ZHY.bigWig GRCh38 released borderline replicate concordance, low read length ENCFF003RZA bigWig signal p-value ENCSR782WRO ChIP-seq EFO:0002067 K562 cell line Homo sapiens BMI1-human ENCAB000BDV DNA False 2014-07-07 ENCODE 2 ENCFF577FNG, ENCFF918CSI 627001782 ENCODE Processing Pipeline 95d155888d95966d3fd1d23e6039b82d https://www.encodeproject.org/files/ENCFF003RZA/@@download/ENCFF003RZA.bigWig GRCh38 released borderline replicate concordance, low read length ENCFF564LPQ bigWig signal p-value ENCSR782WRO ChIP-seq EFO:0002067 K562 cell line Homo sapiens BMI1-human ENCAB000BDV DNA False 2014-07-07 ENCODE 1, 2 ENCFF110FDC, ENCFF156FED, ENCFF577FNG, ENCFF918CSI 1095710354 ENCODE Processing Pipeline 95c263fccb9244a901900c80768ddab2 https://www.encodeproject.org/files/ENCFF564LPQ/@@download/ENCFF564LPQ.bigWig GRCh38 released borderline replicate concordance, low read length ENCFF602CYQ bigWig fold change over control ENCSR782WRO ChIP-seq EFO:0002067 K562 cell line Homo sapiens BMI1-human ENCAB000BDV DNA False 2014-07-07 ENCODE 1 ENCFF110FDC, ENCFF156FED 511552254 ENCODE Processing Pipeline 0e40d60050b32ba431aff4705e77f755 https://www.encodeproject.org/files/ENCFF602CYQ/@@download/ENCFF602CYQ.bigWig GRCh38 released borderline replicate concordance, low read length ENCFF604PGE bigWig fold change over control ENCSR782WRO ChIP-seq EFO:0002067 K562 cell line Homo sapiens BMI1-human ENCAB000BDV DNA False 2014-07-07 ENCODE 2 ENCFF577FNG, ENCFF918CSI 463580790 ENCODE Processing Pipeline 8b4927def7a536723b016e397868fdb1 https://www.encodeproject.org/files/ENCFF604PGE/@@download/ENCFF604PGE.bigWig GRCh38 released borderline replicate concordance, low read length ENCFF376OMS bigWig fold change over control ENCSR782WRO ChIP-seq EFO:0002067 K562 cell line Homo sapiens BMI1-human ENCAB000BDV DNA False 2014-07-07 ENCODE 1, 2 ENCFF110FDC, ENCFF156FED, ENCFF577FNG, ENCFF918CSI 1056441819 ENCODE Processing Pipeline 95ad9b18c0e504abb8835bd5a37b6b22 https://www.encodeproject.org/files/ENCFF376OMS/@@download/ENCFF376OMS.bigWig GRCh38 released borderline replicate concordance, low read length ENCFF468IXU bed narrowPeak peaks ENCSR782WRO ChIP-seq EFO:0002067 K562 cell line Homo sapiens BMI1-human ENCAB000BDV DNA False 2014-07-07 ENCODE 2 ENCFF577FNG, ENCFF918CSI 4909507 ENCODE Processing Pipeline 948c7e088d0b63d7a7e0c04949998116 https://www.encodeproject.org/files/ENCFF468IXU/@@download/ENCFF468IXU.bed.gz GRCh38 released borderline replicate concordance, low read length ENCFF639VZZ bed narrowPeak peaks ENCSR782WRO ChIP-seq EFO:0002067 K562 cell line Homo sapiens BMI1-human ENCAB000BDV DNA False 2014-07-07 ENCODE 1 ENCFF110FDC, ENCFF156FED 4798606 ENCODE Processing Pipeline 86f56df383ec7eda19ddae203ff773f9 https://www.encodeproject.org/files/ENCFF639VZZ/@@download/ENCFF639VZZ.bed.gz GRCh38 released borderline replicate concordance, low read length ENCFF890SFW bed narrowPeak peaks ENCSR782WRO ChIP-seq EFO:0002067 K562 cell line Homo sapiens BMI1-human ENCAB000BDV DNA False 2014-07-07 ENCODE 1, 2 ENCFF110FDC, ENCFF156FED, ENCFF577FNG, ENCFF918CSI 6354971 ENCODE Processing Pipeline 91d82c0629b576a9b7d3824f68c61999 https://www.encodeproject.org/files/ENCFF890SFW/@@download/ENCFF890SFW.bed.gz GRCh38 released borderline replicate concordance, low read length ENCFF531HBZ bigBed narrowPeak peaks ENCSR782WRO ChIP-seq EFO:0002067 K562 cell line Homo sapiens BMI1-human ENCAB000BDV DNA False 2014-07-07 ENCODE 1 ENCFF639VZZ 11025793 ENCODE Processing Pipeline bc02dcfe5862cc9af91ad60b4c4cac50 https://www.encodeproject.org/files/ENCFF531HBZ/@@download/ENCFF531HBZ.bigBed GRCh38 released borderline replicate concordance, low read length ENCFF113PRG bigBed narrowPeak peaks ENCSR782WRO ChIP-seq EFO:0002067 K562 cell line Homo sapiens BMI1-human ENCAB000BDV DNA False 2014-07-07 ENCODE 2 ENCFF468IXU 10949497 ENCODE Processing Pipeline a1a2e3f9e9f90dd663135c365d4e4c4a https://www.encodeproject.org/files/ENCFF113PRG/@@download/ENCFF113PRG.bigBed GRCh38 released borderline replicate concordance, low read length ENCFF743AZY bigBed narrowPeak peaks ENCSR782WRO ChIP-seq EFO:0002067 K562 cell line Homo sapiens BMI1-human ENCAB000BDV DNA False 2014-07-07 ENCODE 1, 2 ENCFF890SFW 13443236 ENCODE Processing Pipeline f37ffb3032f9d3dfa56afc8d8f279322 https://www.encodeproject.org/files/ENCFF743AZY/@@download/ENCFF743AZY.bigBed GRCh38 released borderline replicate concordance, low read length ENCFF352DRR bed narrowPeak optimal idr thresholded peaks ENCSR782WRO ChIP-seq EFO:0002067 K562 cell line Homo sapiens BMI1-human ENCAB000BDV DNA False 2014-07-07 ENCODE 1, 2 ENCFF419RSJ, ENCFF468IXU, ENCFF639VZZ, ENCFF890SFW 52553 ENCODE Processing Pipeline d1d7aba5f95aad6a5682208eec556e60 https://www.encodeproject.org/files/ENCFF352DRR/@@download/ENCFF352DRR.bed.gz GRCh38 released borderline replicate concordance, low read length ENCFF622QWM bigBed narrowPeak conservative idr thresholded peaks ENCSR782WRO ChIP-seq EFO:0002067 K562 cell line Homo sapiens BMI1-human ENCAB000BDV DNA False 2014-07-07 ENCODE 1, 2 ENCFF753LFL 124821 ENCODE Processing Pipeline 78cf362e8c9f0e51a4d485b24635fc6a https://www.encodeproject.org/files/ENCFF622QWM/@@download/ENCFF622QWM.bigBed GRCh38 released borderline replicate concordance, low read length ENCFF753LFL bed narrowPeak conservative idr thresholded peaks ENCSR782WRO ChIP-seq EFO:0002067 K562 cell line Homo sapiens BMI1-human ENCAB000BDV DNA False 2014-07-07 ENCODE 1, 2 ENCFF419RSJ, ENCFF468IXU, ENCFF639VZZ, ENCFF890SFW 38960 ENCODE Processing Pipeline 7edea7a982228e98681c36c5f0be1b9b https://www.encodeproject.org/files/ENCFF753LFL/@@download/ENCFF753LFL.bed.gz GRCh38 released borderline replicate concordance, low read length ENCFF024XJB bigBed narrowPeak optimal idr thresholded peaks ENCSR782WRO ChIP-seq EFO:0002067 K562 cell line Homo sapiens BMI1-human ENCAB000BDV DNA False 2014-07-07 ENCODE 1, 2 ENCFF352DRR 143823 ENCODE Processing Pipeline d9cdc1cbc4d54743a09194475dfdd655 https://www.encodeproject.org/files/ENCFF024XJB/@@download/ENCFF024XJB.bigBed GRCh38 released borderline replicate concordance, low read length ENCFF427CNQ bed narrowPeak conservative idr thresholded peaks ENCSR782WRO ChIP-seq EFO:0002067 K562 cell line Homo sapiens BMI1-human ENCAB000BDV DNA False 2014-07-07 ENCODE 1, 2 ENCFF001TDO, ENCFF533JJE, ENCFF585JRW, ENCFF965OFQ 33839 ENCODE Processing Pipeline d99078965015adc3a09061142e13db44 https://www.encodeproject.org/files/ENCFF427CNQ/@@download/ENCFF427CNQ.bed.gz hg19 archived borderline replicate concordance, low read length ENCFF625LFC bigBed narrowPeak conservative idr thresholded peaks ENCSR782WRO ChIP-seq EFO:0002067 K562 cell line Homo sapiens BMI1-human ENCAB000BDV DNA False 2014-07-07 ENCODE 1, 2 ENCFF427CNQ 95790 ENCODE Processing Pipeline d8c35801ce73bca2af9e850128566297 https://www.encodeproject.org/files/ENCFF625LFC/@@download/ENCFF625LFC.bigBed hg19 archived borderline replicate concordance, low read length ENCFF477YQY bigBed narrowPeak optimal idr thresholded peaks ENCSR782WRO ChIP-seq EFO:0002067 K562 cell line Homo sapiens BMI1-human ENCAB000BDV DNA False 2014-07-07 ENCODE 1, 2 ENCFF633VCV 108116 ENCODE Processing Pipeline 5feac29db25158b61aa0237a91df71c9 https://www.encodeproject.org/files/ENCFF477YQY/@@download/ENCFF477YQY.bigBed hg19 archived borderline replicate concordance, low read length ENCFF633VCV bed narrowPeak optimal idr thresholded peaks ENCSR782WRO ChIP-seq EFO:0002067 K562 cell line Homo sapiens BMI1-human ENCAB000BDV DNA False 2014-07-07 ENCODE 1, 2 ENCFF001TDO, ENCFF533JJE, ENCFF585JRW, ENCFF965OFQ 44104 ENCODE Processing Pipeline a3731781debd99421892562f126a3fee https://www.encodeproject.org/files/ENCFF633VCV/@@download/ENCFF633VCV.bed.gz hg19 archived borderline replicate concordance, low read length ENCFF325DTB fastq reads ENCSR350XWY ChIP-seq EFO:0002067 K562 cell line Homo sapiens C11orf30-human ENCAB311BPZ DNA False 2016-09-20 ENCODE 2 1 100 paired-ended 2 ENCFF749RRK 1240437687 Michael Snyder, Stanford 177e498de2c125ec6a04e51c5c7068d0 SRA:SRR5111471 https://www.encodeproject.org/files/ENCFF325DTB/@@download/ENCFF325DTB.fastq.gz Illumina HiSeq 4000 /files/ENCFF502GTS/ released low read depth, mild to moderate bottlenecking ENCFF076YGT fastq reads ENCSR350XWY ChIP-seq EFO:0002067 K562 cell line Homo sapiens C11orf30-human ENCAB311BPZ DNA False 2016-09-20 ENCODE 1 1 100 paired-ended 1 ENCFF380PYR 3587655202 Michael Snyder, Stanford e680f88189fd28936aa5953ca2189c06 SRA:SRR5111472 https://www.encodeproject.org/files/ENCFF076YGT/@@download/ENCFF076YGT.fastq.gz Illumina HiSeq 4000 /files/ENCFF259GQA/ released low read depth, mild to moderate bottlenecking ENCFF749RRK fastq reads ENCSR350XWY ChIP-seq EFO:0002067 K562 cell line Homo sapiens C11orf30-human ENCAB311BPZ DNA False 2016-09-20 ENCODE 2 1 100 paired-ended 1 ENCFF325DTB 1117272403 Michael Snyder, Stanford ec6465453aefbdf90412ed2424114ee4 SRA:SRR5111471 https://www.encodeproject.org/files/ENCFF749RRK/@@download/ENCFF749RRK.fastq.gz Illumina HiSeq 4000 /files/ENCFF498JMO/ released low read depth, mild to moderate bottlenecking ENCFF380PYR fastq reads ENCSR350XWY ChIP-seq EFO:0002067 K562 cell line Homo sapiens C11orf30-human ENCAB311BPZ DNA False 2016-09-20 ENCODE 1 1 100 paired-ended 2 ENCFF076YGT 3808846823 Michael Snyder, Stanford 12d1bed63acc1580aa1c327f2a1549e5 SRA:SRR5111472 https://www.encodeproject.org/files/ENCFF380PYR/@@download/ENCFF380PYR.fastq.gz Illumina HiSeq 4000 /files/ENCFF837MIV/ released low read depth, mild to moderate bottlenecking ENCFF163ARJ bam alignments ENCSR350XWY ChIP-seq EFO:0002067 K562 cell line Homo sapiens C11orf30-human ENCAB311BPZ DNA False 2016-09-20 ENCODE 2 100 ENCFF325DTB, ENCFF749RRK, ENCFF807MUK 1895864682 ENCODE Processing Pipeline cee74e01b41e65e84fb825123154fabc https://www.encodeproject.org/files/ENCFF163ARJ/@@download/ENCFF163ARJ.bam hg19 released low read depth, mild to moderate bottlenecking ENCFF472UWP bam unfiltered alignments ENCSR350XWY ChIP-seq EFO:0002067 K562 cell line Homo sapiens C11orf30-human ENCAB311BPZ DNA False 2016-09-20 ENCODE 1 100 ENCFF076YGT, ENCFF380PYR, ENCFF807MUK 6870059386 ENCODE Processing Pipeline 438c9078121a7f4837e524736621cccf https://www.encodeproject.org/files/ENCFF472UWP/@@download/ENCFF472UWP.bam hg19 released low read depth, mild to moderate bottlenecking ENCFF464JSQ bam unfiltered alignments ENCSR350XWY ChIP-seq EFO:0002067 K562 cell line Homo sapiens C11orf30-human ENCAB311BPZ DNA False 2016-09-20 ENCODE 2 100 ENCFF325DTB, ENCFF643CGH, ENCFF749RRK 2377299316 ENCODE Processing Pipeline ccbfc113540498a89de7540e1ba4ee44 https://www.encodeproject.org/files/ENCFF464JSQ/@@download/ENCFF464JSQ.bam GRCh38 released low read depth, mild to moderate bottlenecking ENCFF552FSK bam unfiltered alignments ENCSR350XWY ChIP-seq EFO:0002067 K562 cell line Homo sapiens C11orf30-human ENCAB311BPZ DNA False 2016-09-20 ENCODE 2 100 ENCFF325DTB, ENCFF749RRK, ENCFF807MUK 2374588435 ENCODE Processing Pipeline c666d188c6b2a255b1f774539ddd4097 https://www.encodeproject.org/files/ENCFF552FSK/@@download/ENCFF552FSK.bam hg19 released low read depth, mild to moderate bottlenecking ENCFF904OXK bam alignments ENCSR350XWY ChIP-seq EFO:0002067 K562 cell line Homo sapiens C11orf30-human ENCAB311BPZ DNA False 2016-09-20 ENCODE 2 100 ENCFF325DTB, ENCFF643CGH, ENCFF749RRK 1897347970 ENCODE Processing Pipeline 3e656a2cd3cd0b5f934b75c2bc387942 https://www.encodeproject.org/files/ENCFF904OXK/@@download/ENCFF904OXK.bam GRCh38 released low read depth, mild to moderate bottlenecking ENCFF284AJX bam unfiltered alignments ENCSR350XWY ChIP-seq EFO:0002067 K562 cell line Homo sapiens C11orf30-human ENCAB311BPZ DNA False 2016-09-20 ENCODE 1 100 ENCFF076YGT, ENCFF380PYR, ENCFF643CGH 6873905905 ENCODE Processing Pipeline 9b6cc06d7658b107c963031456abb82b https://www.encodeproject.org/files/ENCFF284AJX/@@download/ENCFF284AJX.bam GRCh38 released low read depth, mild to moderate bottlenecking ENCFF290MFM bam alignments ENCSR350XWY ChIP-seq EFO:0002067 K562 cell line Homo sapiens C11orf30-human ENCAB311BPZ DNA False 2016-09-20 ENCODE 1 100 ENCFF076YGT, ENCFF380PYR, ENCFF807MUK 4693498249 ENCODE Processing Pipeline dd72f6a25a0e0f1df274b0f904fd02f3 https://www.encodeproject.org/files/ENCFF290MFM/@@download/ENCFF290MFM.bam hg19 released low read depth, mild to moderate bottlenecking ENCFF077NYA bam alignments ENCSR350XWY ChIP-seq EFO:0002067 K562 cell line Homo sapiens C11orf30-human ENCAB311BPZ DNA False 2016-09-20 ENCODE 1 100 ENCFF076YGT, ENCFF380PYR, ENCFF643CGH 4697667356 ENCODE Processing Pipeline c34bb214c8b862fd5c5faf573b383fc0 https://www.encodeproject.org/files/ENCFF077NYA/@@download/ENCFF077NYA.bam GRCh38 released low read depth, mild to moderate bottlenecking ENCFF958NIG bigWig signal p-value ENCSR350XWY ChIP-seq EFO:0002067 K562 cell line Homo sapiens C11orf30-human ENCAB311BPZ DNA False 2016-09-20 ENCODE 2 ENCFF160VXC, ENCFF163ARJ 966121248 ENCODE Processing Pipeline 1e1bdc656441682858ff40fe7289167c https://www.encodeproject.org/files/ENCFF958NIG/@@download/ENCFF958NIG.bigWig hg19 released low read depth, mild to moderate bottlenecking ENCFF844XBQ bigWig signal p-value ENCSR350XWY ChIP-seq EFO:0002067 K562 cell line Homo sapiens C11orf30-human ENCAB311BPZ DNA False 2016-09-20 ENCODE 1, 2 ENCFF160VXC, ENCFF163ARJ, ENCFF290MFM, ENCFF834TUP 1721344413 ENCODE Processing Pipeline 8dc39ae7d04e915d9d3d8c0f9195eb8c https://www.encodeproject.org/files/ENCFF844XBQ/@@download/ENCFF844XBQ.bigWig hg19 released low read depth, mild to moderate bottlenecking ENCFF750INL bigWig signal p-value ENCSR350XWY ChIP-seq EFO:0002067 K562 cell line Homo sapiens C11orf30-human ENCAB311BPZ DNA False 2016-09-20 ENCODE 1 ENCFF160VXC, ENCFF290MFM, ENCFF834TUP 1507626772 ENCODE Processing Pipeline 3847011724c5d51931298ecbec0d1956 https://www.encodeproject.org/files/ENCFF750INL/@@download/ENCFF750INL.bigWig hg19 released low read depth, mild to moderate bottlenecking ENCFF551DCQ bigWig fold change over control ENCSR350XWY ChIP-seq EFO:0002067 K562 cell line Homo sapiens C11orf30-human ENCAB311BPZ DNA False 2016-09-20 ENCODE 1 ENCFF160VXC, ENCFF290MFM, ENCFF834TUP 1913710934 ENCODE Processing Pipeline a8901b7b6922fc57b084adc90374b1f1 https://www.encodeproject.org/files/ENCFF551DCQ/@@download/ENCFF551DCQ.bigWig hg19 released low read depth, mild to moderate bottlenecking ENCFF406JQQ bigWig fold change over control ENCSR350XWY ChIP-seq EFO:0002067 K562 cell line Homo sapiens C11orf30-human ENCAB311BPZ DNA False 2016-09-20 ENCODE 2 ENCFF160VXC, ENCFF163ARJ 813965046 ENCODE Processing Pipeline 2290586a58587dd6b51a475c17365d22 https://www.encodeproject.org/files/ENCFF406JQQ/@@download/ENCFF406JQQ.bigWig hg19 released low read depth, mild to moderate bottlenecking ENCFF559KAV bed narrowPeak peaks ENCSR350XWY ChIP-seq EFO:0002067 K562 cell line Homo sapiens C11orf30-human ENCAB311BPZ DNA False 2016-09-20 ENCODE 1 ENCFF160VXC, ENCFF290MFM, ENCFF834TUP 7220426 ENCODE Processing Pipeline 67f2d90491c50a8dd513d9433326ee96 https://www.encodeproject.org/files/ENCFF559KAV/@@download/ENCFF559KAV.bed.gz hg19 released low read depth, mild to moderate bottlenecking ENCFF861KBO bigBed narrowPeak peaks ENCSR350XWY ChIP-seq EFO:0002067 K562 cell line Homo sapiens C11orf30-human ENCAB311BPZ DNA False 2016-09-20 ENCODE 1, 2 ENCFF820UXS 13931850 ENCODE Processing Pipeline a6b8127c8f422235e88b8706aa50f3c8 https://www.encodeproject.org/files/ENCFF861KBO/@@download/ENCFF861KBO.bigBed hg19 released low read depth, mild to moderate bottlenecking ENCFF996ZGL bed narrowPeak optimal idr thresholded peaks ENCSR350XWY ChIP-seq EFO:0002067 K562 cell line Homo sapiens C11orf30-human ENCAB311BPZ DNA False 2016-09-20 ENCODE 1, 2 ENCFF001TDO, ENCFF486RQW, ENCFF559KAV, ENCFF820UXS 1088718 ENCODE Processing Pipeline 7dc77d245f171e4a785144bb7ec5342c https://www.encodeproject.org/files/ENCFF996ZGL/@@download/ENCFF996ZGL.bed.gz hg19 released low read depth, mild to moderate bottlenecking ENCFF820UXS bed narrowPeak peaks ENCSR350XWY ChIP-seq EFO:0002067 K562 cell line Homo sapiens C11orf30-human ENCAB311BPZ DNA False 2016-09-20 ENCODE 1, 2 ENCFF160VXC, ENCFF163ARJ, ENCFF290MFM, ENCFF834TUP 7233158 ENCODE Processing Pipeline bee511eb11daba31bae945c82eaebc64 https://www.encodeproject.org/files/ENCFF820UXS/@@download/ENCFF820UXS.bed.gz hg19 released low read depth, mild to moderate bottlenecking ENCFF219HQE bigWig fold change over control ENCSR350XWY ChIP-seq EFO:0002067 K562 cell line Homo sapiens C11orf30-human ENCAB311BPZ DNA False 2016-09-20 ENCODE 1, 2 ENCFF160VXC, ENCFF163ARJ, ENCFF290MFM, ENCFF834TUP 2126063930 ENCODE Processing Pipeline cc34720919fb91657a7a59db74789721 https://www.encodeproject.org/files/ENCFF219HQE/@@download/ENCFF219HQE.bigWig hg19 released low read depth, mild to moderate bottlenecking ENCFF602NCB bed narrowPeak conservative idr thresholded peaks ENCSR350XWY ChIP-seq EFO:0002067 K562 cell line Homo sapiens C11orf30-human ENCAB311BPZ DNA False 2016-09-20 ENCODE 1, 2 ENCFF001TDO, ENCFF486RQW, ENCFF559KAV, ENCFF820UXS 871663 ENCODE Processing Pipeline 69cc024cd6a350ea564706807f60c6f1 https://www.encodeproject.org/files/ENCFF602NCB/@@download/ENCFF602NCB.bed.gz hg19 released low read depth, mild to moderate bottlenecking ENCFF486RQW bed narrowPeak peaks ENCSR350XWY ChIP-seq EFO:0002067 K562 cell line Homo sapiens C11orf30-human ENCAB311BPZ DNA False 2016-09-20 ENCODE 2 ENCFF160VXC, ENCFF163ARJ 6476407 ENCODE Processing Pipeline fbfee1e1f572133bd719fcf43a6ed903 https://www.encodeproject.org/files/ENCFF486RQW/@@download/ENCFF486RQW.bed.gz hg19 released low read depth, mild to moderate bottlenecking ENCFF633RQU bigBed narrowPeak peaks ENCSR350XWY ChIP-seq EFO:0002067 K562 cell line Homo sapiens C11orf30-human ENCAB311BPZ DNA False 2016-09-20 ENCODE 2 ENCFF486RQW 13593993 ENCODE Processing Pipeline 2e71c289c105b5dda407dbcf9ef342c0 https://www.encodeproject.org/files/ENCFF633RQU/@@download/ENCFF633RQU.bigBed hg19 released low read depth, mild to moderate bottlenecking ENCFF304UPC bigBed narrowPeak optimal idr thresholded peaks ENCSR350XWY ChIP-seq EFO:0002067 K562 cell line Homo sapiens C11orf30-human ENCAB311BPZ DNA False 2016-09-20 ENCODE 1, 2 ENCFF996ZGL 2133445 ENCODE Processing Pipeline 4276dfa9ab28139a6c29d47a494f0d84 https://www.encodeproject.org/files/ENCFF304UPC/@@download/ENCFF304UPC.bigBed hg19 released low read depth, mild to moderate bottlenecking ENCFF178UHY bigBed narrowPeak peaks ENCSR350XWY ChIP-seq EFO:0002067 K562 cell line Homo sapiens C11orf30-human ENCAB311BPZ DNA False 2016-09-20 ENCODE 1 ENCFF559KAV 13886616 ENCODE Processing Pipeline 7f613d99189c86ce6d3d88398bea79f2 https://www.encodeproject.org/files/ENCFF178UHY/@@download/ENCFF178UHY.bigBed hg19 released low read depth, mild to moderate bottlenecking ENCFF826NFI bigBed narrowPeak conservative idr thresholded peaks ENCSR350XWY ChIP-seq EFO:0002067 K562 cell line Homo sapiens C11orf30-human ENCAB311BPZ DNA False 2016-09-20 ENCODE 1, 2 ENCFF602NCB 1792282 ENCODE Processing Pipeline 8d37b0870a550b545b75b76f86fd610c https://www.encodeproject.org/files/ENCFF826NFI/@@download/ENCFF826NFI.bigBed hg19 released low read depth, mild to moderate bottlenecking ENCFF517WFZ bigWig signal p-value ENCSR350XWY ChIP-seq EFO:0002067 K562 cell line Homo sapiens C11orf30-human ENCAB311BPZ DNA False 2016-09-20 ENCODE 1 ENCFF077NYA, ENCFF712WXB, ENCFF790TAN 1740226530 ENCODE Processing Pipeline 43b7a30a22440d071648f1c5b03d1eeb https://www.encodeproject.org/files/ENCFF517WFZ/@@download/ENCFF517WFZ.bigWig GRCh38 released low read depth, mild to moderate bottlenecking ENCFF197TSC bigWig signal p-value ENCSR350XWY ChIP-seq EFO:0002067 K562 cell line Homo sapiens C11orf30-human ENCAB311BPZ DNA False 2016-09-20 ENCODE 2 ENCFF790TAN, ENCFF904OXK 959208657 ENCODE Processing Pipeline 0c2bbaf058472ffce29a1461c27fc58a https://www.encodeproject.org/files/ENCFF197TSC/@@download/ENCFF197TSC.bigWig GRCh38 released low read depth, mild to moderate bottlenecking ENCFF141UIY bigWig signal p-value ENCSR350XWY ChIP-seq EFO:0002067 K562 cell line Homo sapiens C11orf30-human ENCAB311BPZ DNA False 2016-09-20 ENCODE 1, 2 ENCFF077NYA, ENCFF712WXB, ENCFF790TAN, ENCFF904OXK 1690670908 ENCODE Processing Pipeline 5464db21610a7de13749be01af8158dd https://www.encodeproject.org/files/ENCFF141UIY/@@download/ENCFF141UIY.bigWig GRCh38 released low read depth, mild to moderate bottlenecking ENCFF675FVS bigWig fold change over control ENCSR350XWY ChIP-seq EFO:0002067 K562 cell line Homo sapiens C11orf30-human ENCAB311BPZ DNA False 2016-09-20 ENCODE 1 ENCFF077NYA, ENCFF712WXB, ENCFF790TAN 1914988828 ENCODE Processing Pipeline 873ec93387921282fe319e1b769a7633 https://www.encodeproject.org/files/ENCFF675FVS/@@download/ENCFF675FVS.bigWig GRCh38 released low read depth, mild to moderate bottlenecking ENCFF856HEX bigWig fold change over control ENCSR350XWY ChIP-seq EFO:0002067 K562 cell line Homo sapiens C11orf30-human ENCAB311BPZ DNA False 2016-09-20 ENCODE 2 ENCFF790TAN, ENCFF904OXK 812100136 ENCODE Processing Pipeline cd0618493b5c1607ca366502240e0277 https://www.encodeproject.org/files/ENCFF856HEX/@@download/ENCFF856HEX.bigWig GRCh38 released low read depth, mild to moderate bottlenecking ENCFF210EVB bigWig fold change over control ENCSR350XWY ChIP-seq EFO:0002067 K562 cell line Homo sapiens C11orf30-human ENCAB311BPZ DNA False 2016-09-20 ENCODE 1, 2 ENCFF077NYA, ENCFF712WXB, ENCFF790TAN, ENCFF904OXK 2116715826 ENCODE Processing Pipeline 778bebbed9264d25bf158ed7b687d984 https://www.encodeproject.org/files/ENCFF210EVB/@@download/ENCFF210EVB.bigWig GRCh38 released low read depth, mild to moderate bottlenecking ENCFF839JZV bed narrowPeak peaks ENCSR350XWY ChIP-seq EFO:0002067 K562 cell line Homo sapiens C11orf30-human ENCAB311BPZ DNA False 2016-09-20 ENCODE 1 ENCFF077NYA, ENCFF712WXB, ENCFF790TAN 7141204 ENCODE Processing Pipeline 476ac3e0225d92a71fd82a03729d3ab5 https://www.encodeproject.org/files/ENCFF839JZV/@@download/ENCFF839JZV.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking ENCFF610EDP bed narrowPeak peaks ENCSR350XWY ChIP-seq EFO:0002067 K562 cell line Homo sapiens C11orf30-human ENCAB311BPZ DNA False 2016-09-20 ENCODE 2 ENCFF790TAN, ENCFF904OXK 6329803 ENCODE Processing Pipeline a6ff5eb80f5b136d4580ccaaaad7b699 https://www.encodeproject.org/files/ENCFF610EDP/@@download/ENCFF610EDP.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking ENCFF184OEL bed narrowPeak peaks ENCSR350XWY ChIP-seq EFO:0002067 K562 cell line Homo sapiens C11orf30-human ENCAB311BPZ DNA False 2016-09-20 ENCODE 1, 2 ENCFF077NYA, ENCFF712WXB, ENCFF790TAN, ENCFF904OXK 7208505 ENCODE Processing Pipeline a3aba52733269e8b29fa4155ec7b72a4 https://www.encodeproject.org/files/ENCFF184OEL/@@download/ENCFF184OEL.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking ENCFF531NHZ bigBed narrowPeak peaks ENCSR350XWY ChIP-seq EFO:0002067 K562 cell line Homo sapiens C11orf30-human ENCAB311BPZ DNA False 2016-09-20 ENCODE 1 ENCFF839JZV 13813020 ENCODE Processing Pipeline 78e6e89186ed882c41976b8a20fbc5a9 https://www.encodeproject.org/files/ENCFF531NHZ/@@download/ENCFF531NHZ.bigBed GRCh38 released low read depth, mild to moderate bottlenecking ENCFF776VQJ bigBed narrowPeak optimal idr thresholded peaks ENCSR350XWY ChIP-seq EFO:0002067 K562 cell line Homo sapiens C11orf30-human ENCAB311BPZ DNA False 2016-09-20 ENCODE 1, 2 ENCFF104MXG 2143223 ENCODE Processing Pipeline cc3968d306dec46cebb4d507f0cff28c https://www.encodeproject.org/files/ENCFF776VQJ/@@download/ENCFF776VQJ.bigBed GRCh38 released low read depth, mild to moderate bottlenecking ENCFF964LCJ bigBed narrowPeak peaks ENCSR350XWY ChIP-seq EFO:0002067 K562 cell line Homo sapiens C11orf30-human ENCAB311BPZ DNA False 2016-09-20 ENCODE 2 ENCFF610EDP 13517973 ENCODE Processing Pipeline 98ac1ec7eb6c63f433ec0f4631431aed https://www.encodeproject.org/files/ENCFF964LCJ/@@download/ENCFF964LCJ.bigBed GRCh38 released low read depth, mild to moderate bottlenecking ENCFF825LBQ bed narrowPeak conservative idr thresholded peaks ENCSR350XWY ChIP-seq EFO:0002067 K562 cell line Homo sapiens C11orf30-human ENCAB311BPZ DNA False 2016-09-20 ENCODE 1, 2 ENCFF184OEL, ENCFF419RSJ, ENCFF610EDP, ENCFF839JZV 868829 ENCODE Processing Pipeline 5a251b14e8176d83630b79dd1f79a9e4 https://www.encodeproject.org/files/ENCFF825LBQ/@@download/ENCFF825LBQ.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking ENCFF104MXG bed narrowPeak optimal idr thresholded peaks ENCSR350XWY ChIP-seq EFO:0002067 K562 cell line Homo sapiens C11orf30-human ENCAB311BPZ DNA False 2016-09-20 ENCODE 1, 2 ENCFF184OEL, ENCFF419RSJ, ENCFF610EDP, ENCFF839JZV 1093881 ENCODE Processing Pipeline deefb2b075a1019cafbcf0117822e8dc https://www.encodeproject.org/files/ENCFF104MXG/@@download/ENCFF104MXG.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking ENCFF839VXE bigBed narrowPeak peaks ENCSR350XWY ChIP-seq EFO:0002067 K562 cell line Homo sapiens C11orf30-human ENCAB311BPZ DNA False 2016-09-20 ENCODE 1, 2 ENCFF184OEL 13918958 ENCODE Processing Pipeline 0947695230f9dd5cd08875641a60dd07 https://www.encodeproject.org/files/ENCFF839VXE/@@download/ENCFF839VXE.bigBed GRCh38 released low read depth, mild to moderate bottlenecking ENCFF129HUO bigBed narrowPeak conservative idr thresholded peaks ENCSR350XWY ChIP-seq EFO:0002067 K562 cell line Homo sapiens C11orf30-human ENCAB311BPZ DNA False 2016-09-20 ENCODE 1, 2 ENCFF825LBQ 1790195 ENCODE Processing Pipeline 7c282d44c3a3866b2191a8ef9757d79a https://www.encodeproject.org/files/ENCFF129HUO/@@download/ENCFF129HUO.bigBed GRCh38 released low read depth, mild to moderate bottlenecking ENCFF157XWR bam unfiltered alignments ENCSR124BJR ChIP-seq EFO:0002067 K562 cell line Homo sapiens ETV6-human ENCAB997CJG DNA False 2014-07-07 ENCODE 2 36 ENCFF002EEB, ENCFF807MUK 1154479057 ENCODE Processing Pipeline c269717dec9fc70558bff457f81a4029 https://www.encodeproject.org/files/ENCFF157XWR/@@download/ENCFF157XWR.bam hg19 released borderline replicate concordance, low read depth, low read length ENCFF380QNJ bam unfiltered alignments ENCSR124BJR ChIP-seq EFO:0002067 K562 cell line Homo sapiens ETV6-human ENCAB997CJG DNA False 2014-07-07 ENCODE 1 36 ENCFF002EEK, ENCFF807MUK 1259238902 ENCODE Processing Pipeline 0cf35d1e567159f23961b5826da61233 https://www.encodeproject.org/files/ENCFF380QNJ/@@download/ENCFF380QNJ.bam hg19 released borderline replicate concordance, low read depth, low read length ENCFF002EEB fastq reads ENCSR124BJR ChIP-seq EFO:0002067 K562 cell line Homo sapiens ETV6-human ENCAB997CJG DNA False 2014-07-07 ENCODE 2 1 36 single-ended 828202573 Michael Snyder, Stanford 34e3d186046f404947bf0b638459e29e SRA:SRR5111238 https://www.encodeproject.org/files/ENCFF002EEB/@@download/ENCFF002EEB.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF002ECS/ released borderline replicate concordance, low read depth, low read length ENCFF002EEK fastq reads ENCSR124BJR ChIP-seq EFO:0002067 K562 cell line Homo sapiens ETV6-human ENCAB997CJG DNA False 2014-07-07 ENCODE 1 1 36 single-ended 901767594 Michael Snyder, Stanford 16d63ab4b2855b7e1e898f3b49d08c94 SRA:SRR5111237 https://www.encodeproject.org/files/ENCFF002EEK/@@download/ENCFF002EEK.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF002ECW/ released borderline replicate concordance, low read depth, low read length ENCFF890OID bam alignments ENCSR124BJR ChIP-seq EFO:0002067 K562 cell line Homo sapiens ETV6-human ENCAB997CJG DNA False 2014-07-07 ENCODE 1 ENCFF002EEK, ENCFF807MUK 796998509 ENCODE Processing Pipeline c838bca76f12095f6c534e188cfe1c9a https://www.encodeproject.org/files/ENCFF890OID/@@download/ENCFF890OID.bam hg19 released borderline replicate concordance, low read depth, low read length ENCFF460VLB bam alignments ENCSR124BJR ChIP-seq EFO:0002067 K562 cell line Homo sapiens ETV6-human ENCAB997CJG DNA False 2014-07-07 ENCODE 2 ENCFF002EEB, ENCFF807MUK 726426359 ENCODE Processing Pipeline 4e4c412254e8765d373bfa463564c689 https://www.encodeproject.org/files/ENCFF460VLB/@@download/ENCFF460VLB.bam hg19 released borderline replicate concordance, low read depth, low read length ENCFF698AJT bigWig signal p-value ENCSR124BJR ChIP-seq EFO:0002067 K562 cell line Homo sapiens ETV6-human ENCAB997CJG DNA False 2014-07-07 ENCODE 1 ENCFF335IPE, ENCFF890OID 512768055 ENCODE Processing Pipeline 98252f362dcef49a8fdab6ae9f9c2c84 https://www.encodeproject.org/files/ENCFF698AJT/@@download/ENCFF698AJT.bigWig hg19 released borderline replicate concordance, low read depth, low read length ENCFF558BWS bed narrowPeak peaks ENCSR124BJR ChIP-seq EFO:0002067 K562 cell line Homo sapiens ETV6-human ENCAB997CJG DNA False 2014-07-07 ENCODE 1, 2 ENCFF335IPE, ENCFF460VLB, ENCFF879OQC, ENCFF890OID 6044352 ENCODE Processing Pipeline 9214e6951304b9d8adf49bcdd36c2dd7 https://www.encodeproject.org/files/ENCFF558BWS/@@download/ENCFF558BWS.bed.gz hg19 released borderline replicate concordance, low read depth, low read length ENCFF535TIU bigWig signal p-value ENCSR124BJR ChIP-seq EFO:0002067 K562 cell line Homo sapiens ETV6-human ENCAB997CJG DNA False 2014-07-07 ENCODE 1, 2 ENCFF335IPE, ENCFF460VLB, ENCFF879OQC, ENCFF890OID 987536449 ENCODE Processing Pipeline 2e35e44b9b8691b229ce5d3fb8faf664 https://www.encodeproject.org/files/ENCFF535TIU/@@download/ENCFF535TIU.bigWig hg19 released borderline replicate concordance, low read depth, low read length ENCFF493CPV bigWig fold change over control ENCSR124BJR ChIP-seq EFO:0002067 K562 cell line Homo sapiens ETV6-human ENCAB997CJG DNA False 2014-07-07 ENCODE 1 ENCFF335IPE, ENCFF890OID 434883875 ENCODE Processing Pipeline 3a4194c3ead4159ec416c7544b62d285 https://www.encodeproject.org/files/ENCFF493CPV/@@download/ENCFF493CPV.bigWig hg19 released borderline replicate concordance, low read depth, low read length ENCFF394FCW bigWig fold change over control ENCSR124BJR ChIP-seq EFO:0002067 K562 cell line Homo sapiens ETV6-human ENCAB997CJG DNA False 2014-07-07 ENCODE 2 ENCFF460VLB, ENCFF879OQC 444123179 ENCODE Processing Pipeline 929cc47ea0f50a27da374c14969c2966 https://www.encodeproject.org/files/ENCFF394FCW/@@download/ENCFF394FCW.bigWig hg19 released borderline replicate concordance, low read depth, low read length ENCFF611XPF bed narrowPeak peaks ENCSR124BJR ChIP-seq EFO:0002067 K562 cell line Homo sapiens ETV6-human ENCAB997CJG DNA False 2014-07-07 ENCODE 1 ENCFF335IPE, ENCFF890OID 4886038 ENCODE Processing Pipeline b3815ddeec64dda0ee78e87fa3eebd62 https://www.encodeproject.org/files/ENCFF611XPF/@@download/ENCFF611XPF.bed.gz hg19 released borderline replicate concordance, low read depth, low read length ENCFF315GZR bed narrowPeak peaks ENCSR124BJR ChIP-seq EFO:0002067 K562 cell line Homo sapiens ETV6-human ENCAB997CJG DNA False 2014-07-07 ENCODE 2 ENCFF460VLB, ENCFF879OQC 4255538 ENCODE Processing Pipeline 4f8d22993149919034182d1036579416 https://www.encodeproject.org/files/ENCFF315GZR/@@download/ENCFF315GZR.bed.gz hg19 released borderline replicate concordance, low read depth, low read length ENCFF456OUS bigBed narrowPeak peaks ENCSR124BJR ChIP-seq EFO:0002067 K562 cell line Homo sapiens ETV6-human ENCAB997CJG DNA False 2014-07-07 ENCODE 1, 2 ENCFF558BWS 11319836 ENCODE Processing Pipeline 6e16bfe762fc940cdefda63e306180ca https://www.encodeproject.org/files/ENCFF456OUS/@@download/ENCFF456OUS.bigBed hg19 released borderline replicate concordance, low read depth, low read length ENCFF926PGH bigWig signal p-value ENCSR124BJR ChIP-seq EFO:0002067 K562 cell line Homo sapiens ETV6-human ENCAB997CJG DNA False 2014-07-07 ENCODE 2 ENCFF460VLB, ENCFF879OQC 465272578 ENCODE Processing Pipeline 21754eeccf2f435328a880540744568a https://www.encodeproject.org/files/ENCFF926PGH/@@download/ENCFF926PGH.bigWig hg19 released borderline replicate concordance, low read depth, low read length ENCFF720YCI bigWig fold change over control ENCSR124BJR ChIP-seq EFO:0002067 K562 cell line Homo sapiens ETV6-human ENCAB997CJG DNA False 2014-07-07 ENCODE 1, 2 ENCFF335IPE, ENCFF460VLB, ENCFF879OQC, ENCFF890OID 924593513 ENCODE Processing Pipeline 4edbb2afb674f2b8d01e33da8ed4f22d https://www.encodeproject.org/files/ENCFF720YCI/@@download/ENCFF720YCI.bigWig hg19 released borderline replicate concordance, low read depth, low read length ENCFF861ZFM bigBed narrowPeak optimal idr thresholded peaks ENCSR124BJR ChIP-seq EFO:0002067 K562 cell line Homo sapiens ETV6-human ENCAB997CJG DNA False 2014-07-07 ENCODE 1, 2 ENCFF660VPM 135411 ENCODE Processing Pipeline 88b91ce458c67e68322933f71361257f https://www.encodeproject.org/files/ENCFF861ZFM/@@download/ENCFF861ZFM.bigBed hg19 released borderline replicate concordance, low read depth, low read length ENCFF808CFK bed narrowPeak conservative idr thresholded peaks ENCSR124BJR ChIP-seq EFO:0002067 K562 cell line Homo sapiens ETV6-human ENCAB997CJG DNA False 2014-07-07 ENCODE 1, 2 ENCFF001TDO, ENCFF315GZR, ENCFF558BWS, ENCFF611XPF 27851 ENCODE Processing Pipeline b907dc9da9a5797b4a3025ff2473167f https://www.encodeproject.org/files/ENCFF808CFK/@@download/ENCFF808CFK.bed.gz hg19 released borderline replicate concordance, low read depth, low read length ENCFF717UBI bigBed narrowPeak peaks ENCSR124BJR ChIP-seq EFO:0002067 K562 cell line Homo sapiens ETV6-human ENCAB997CJG DNA False 2014-07-07 ENCODE 1 ENCFF611XPF 11000431 ENCODE Processing Pipeline f643ad322e5f13486176d8b4d9d41568 https://www.encodeproject.org/files/ENCFF717UBI/@@download/ENCFF717UBI.bigBed hg19 released borderline replicate concordance, low read depth, low read length ENCFF793EQW bigBed narrowPeak peaks ENCSR124BJR ChIP-seq EFO:0002067 K562 cell line Homo sapiens ETV6-human ENCAB997CJG DNA False 2014-07-07 ENCODE 2 ENCFF315GZR 10761250 ENCODE Processing Pipeline c805642d3c1300b3d5da3bbd8deb05fd https://www.encodeproject.org/files/ENCFF793EQW/@@download/ENCFF793EQW.bigBed hg19 released borderline replicate concordance, low read depth, low read length ENCFF055AYE bigBed narrowPeak conservative idr thresholded peaks ENCSR124BJR ChIP-seq EFO:0002067 K562 cell line Homo sapiens ETV6-human ENCAB997CJG DNA False 2014-07-07 ENCODE 1, 2 ENCFF808CFK 104341 ENCODE Processing Pipeline e46bca0b82cd5a3ebe5eadda26419e2e https://www.encodeproject.org/files/ENCFF055AYE/@@download/ENCFF055AYE.bigBed hg19 released borderline replicate concordance, low read depth, low read length ENCFF660VPM bed narrowPeak optimal idr thresholded peaks ENCSR124BJR ChIP-seq EFO:0002067 K562 cell line Homo sapiens ETV6-human ENCAB997CJG DNA False 2014-07-07 ENCODE 1, 2 ENCFF001TDO, ENCFF315GZR, ENCFF558BWS, ENCFF611XPF 48570 ENCODE Processing Pipeline 627872c6c63dc5283d8687e9efa8fe7b https://www.encodeproject.org/files/ENCFF660VPM/@@download/ENCFF660VPM.bed.gz hg19 released borderline replicate concordance, low read depth, low read length ENCFF807KWU bam unfiltered alignments ENCSR124BJR ChIP-seq EFO:0002067 K562 cell line Homo sapiens ETV6-human ENCAB997CJG DNA False 2014-07-07 ENCODE 1 36 ENCFF002EEK, ENCFF643CGH 1264282874 ENCODE Processing Pipeline 119abee6289b6d8cd0c3fba72731ce0c https://www.encodeproject.org/files/ENCFF807KWU/@@download/ENCFF807KWU.bam GRCh38 released borderline replicate concordance, low read depth, low read length ENCFF417FHN bam alignments ENCSR124BJR ChIP-seq EFO:0002067 K562 cell line Homo sapiens ETV6-human ENCAB997CJG DNA False 2014-07-07 ENCODE 2 36 ENCFF002EEB, ENCFF643CGH 725898596 ENCODE Processing Pipeline 4d5699d2cd86734f1595141095503f92 https://www.encodeproject.org/files/ENCFF417FHN/@@download/ENCFF417FHN.bam GRCh38 released borderline replicate concordance, low read depth, low read length ENCFF373SHV bam unfiltered alignments ENCSR124BJR ChIP-seq EFO:0002067 K562 cell line Homo sapiens ETV6-human ENCAB997CJG DNA False 2014-07-07 ENCODE 2 36 ENCFF002EEB, ENCFF643CGH 1159101782 ENCODE Processing Pipeline d7fcdf90fc8a67a8f5e17d65422f0334 https://www.encodeproject.org/files/ENCFF373SHV/@@download/ENCFF373SHV.bam GRCh38 released borderline replicate concordance, low read depth, low read length ENCFF003FNG bam alignments ENCSR124BJR ChIP-seq EFO:0002067 K562 cell line Homo sapiens ETV6-human ENCAB997CJG DNA False 2014-07-07 ENCODE 1 36 ENCFF002EEK, ENCFF643CGH 796413587 ENCODE Processing Pipeline 53866be3b69bf37033b72c5ab053ff58 https://www.encodeproject.org/files/ENCFF003FNG/@@download/ENCFF003FNG.bam GRCh38 released borderline replicate concordance, low read depth, low read length ENCFF917UZZ bigWig signal p-value ENCSR124BJR ChIP-seq EFO:0002067 K562 cell line Homo sapiens ETV6-human ENCAB997CJG DNA False 2014-07-07 ENCODE 1 ENCFF003FNG, ENCFF156FED 464488413 ENCODE Processing Pipeline 1da1b29f0107b1b04bd75e2412881ae0 https://www.encodeproject.org/files/ENCFF917UZZ/@@download/ENCFF917UZZ.bigWig GRCh38 released borderline replicate concordance, low read depth, low read length ENCFF842BNX bigWig signal p-value ENCSR124BJR ChIP-seq EFO:0002067 K562 cell line Homo sapiens ETV6-human ENCAB997CJG DNA False 2014-07-07 ENCODE 2 ENCFF417FHN, ENCFF577FNG 466021497 ENCODE Processing Pipeline 67b2fed22ed17e49c9a7b0f8c07042f8 https://www.encodeproject.org/files/ENCFF842BNX/@@download/ENCFF842BNX.bigWig GRCh38 released borderline replicate concordance, low read depth, low read length ENCFF870EFW bigWig signal p-value ENCSR124BJR ChIP-seq EFO:0002067 K562 cell line Homo sapiens ETV6-human ENCAB997CJG DNA False 2014-07-07 ENCODE 1, 2 ENCFF003FNG, ENCFF156FED, ENCFF417FHN, ENCFF577FNG 1034090693 ENCODE Processing Pipeline 8288ab9a0fcbcf4c769130de1099dfa2 https://www.encodeproject.org/files/ENCFF870EFW/@@download/ENCFF870EFW.bigWig GRCh38 released borderline replicate concordance, low read depth, low read length ENCFF127PLS bigWig fold change over control ENCSR124BJR ChIP-seq EFO:0002067 K562 cell line Homo sapiens ETV6-human ENCAB997CJG DNA False 2014-07-07 ENCODE 1 ENCFF003FNG, ENCFF156FED 434802037 ENCODE Processing Pipeline a7a09ca88d2f2787912c119219d79013 https://www.encodeproject.org/files/ENCFF127PLS/@@download/ENCFF127PLS.bigWig GRCh38 released borderline replicate concordance, low read depth, low read length ENCFF526IDO bigWig fold change over control ENCSR124BJR ChIP-seq EFO:0002067 K562 cell line Homo sapiens ETV6-human ENCAB997CJG DNA False 2014-07-07 ENCODE 2 ENCFF417FHN, ENCFF577FNG 443467112 ENCODE Processing Pipeline d1a2fc9605e4cad62b2371dc9a4f2b2a https://www.encodeproject.org/files/ENCFF526IDO/@@download/ENCFF526IDO.bigWig GRCh38 released borderline replicate concordance, low read depth, low read length ENCFF492DSP bigWig fold change over control ENCSR124BJR ChIP-seq EFO:0002067 K562 cell line Homo sapiens ETV6-human ENCAB997CJG DNA False 2014-07-07 ENCODE 1, 2 ENCFF003FNG, ENCFF156FED, ENCFF417FHN, ENCFF577FNG 955456160 ENCODE Processing Pipeline f766b23c6058faae05d19c4daafc8856 https://www.encodeproject.org/files/ENCFF492DSP/@@download/ENCFF492DSP.bigWig GRCh38 released borderline replicate concordance, low read depth, low read length ENCFF899ZVN bed narrowPeak peaks ENCSR124BJR ChIP-seq EFO:0002067 K562 cell line Homo sapiens ETV6-human ENCAB997CJG DNA False 2014-07-07 ENCODE 1, 2 ENCFF003FNG, ENCFF156FED, ENCFF417FHN, ENCFF577FNG 5977605 ENCODE Processing Pipeline 7cae2a795579bba647f9eb7ecbf87719 https://www.encodeproject.org/files/ENCFF899ZVN/@@download/ENCFF899ZVN.bed.gz GRCh38 released borderline replicate concordance, low read depth, low read length ENCFF484FZK bed narrowPeak peaks ENCSR124BJR ChIP-seq EFO:0002067 K562 cell line Homo sapiens ETV6-human ENCAB997CJG DNA False 2014-07-07 ENCODE 2 ENCFF417FHN, ENCFF577FNG 4091359 ENCODE Processing Pipeline 1db8132c60456cce55068c509756f938 https://www.encodeproject.org/files/ENCFF484FZK/@@download/ENCFF484FZK.bed.gz GRCh38 released borderline replicate concordance, low read depth, low read length ENCFF638URI bigBed narrowPeak peaks ENCSR124BJR ChIP-seq EFO:0002067 K562 cell line Homo sapiens ETV6-human ENCAB997CJG DNA False 2014-07-07 ENCODE 1, 2 ENCFF899ZVN 11321904 ENCODE Processing Pipeline 891a3d3e864c2f0604a8cacb2c6cd64f https://www.encodeproject.org/files/ENCFF638URI/@@download/ENCFF638URI.bigBed GRCh38 released borderline replicate concordance, low read depth, low read length ENCFF020ENW bigBed narrowPeak peaks ENCSR124BJR ChIP-seq EFO:0002067 K562 cell line Homo sapiens ETV6-human ENCAB997CJG DNA False 2014-07-07 ENCODE 2 ENCFF484FZK 10538888 ENCODE Processing Pipeline e2455266f2fb99eded75acc612cce510 https://www.encodeproject.org/files/ENCFF020ENW/@@download/ENCFF020ENW.bigBed GRCh38 released borderline replicate concordance, low read depth, low read length ENCFF460HJU bed narrowPeak peaks ENCSR124BJR ChIP-seq EFO:0002067 K562 cell line Homo sapiens ETV6-human ENCAB997CJG DNA False 2014-07-07 ENCODE 1 ENCFF003FNG, ENCFF156FED 4663355 ENCODE Processing Pipeline 56a32039f7074be351bdd56e206248f6 https://www.encodeproject.org/files/ENCFF460HJU/@@download/ENCFF460HJU.bed.gz GRCh38 released borderline replicate concordance, low read depth, low read length ENCFF294NOX bigBed narrowPeak peaks ENCSR124BJR ChIP-seq EFO:0002067 K562 cell line Homo sapiens ETV6-human ENCAB997CJG DNA False 2014-07-07 ENCODE 1 ENCFF460HJU 10865647 ENCODE Processing Pipeline a39bb6abdc8d3412ece7b3745db1d66f https://www.encodeproject.org/files/ENCFF294NOX/@@download/ENCFF294NOX.bigBed GRCh38 released borderline replicate concordance, low read depth, low read length ENCFF277XFN bigBed narrowPeak conservative idr thresholded peaks ENCSR124BJR ChIP-seq EFO:0002067 K562 cell line Homo sapiens ETV6-human ENCAB997CJG DNA False 2014-07-07 ENCODE 1, 2 ENCFF569AQR 103670 ENCODE Processing Pipeline 3439b2bc988e4b840c6708fc976ada0b https://www.encodeproject.org/files/ENCFF277XFN/@@download/ENCFF277XFN.bigBed GRCh38 released borderline replicate concordance, low read depth, low read length ENCFF569AQR bed narrowPeak conservative idr thresholded peaks ENCSR124BJR ChIP-seq EFO:0002067 K562 cell line Homo sapiens ETV6-human ENCAB997CJG DNA False 2014-07-07 ENCODE 1, 2 ENCFF419RSJ, ENCFF460HJU, ENCFF484FZK, ENCFF899ZVN 26950 ENCODE Processing Pipeline 4dee60c47e9d12c1762d288f21ef47f1 https://www.encodeproject.org/files/ENCFF569AQR/@@download/ENCFF569AQR.bed.gz GRCh38 released borderline replicate concordance, low read depth, low read length ENCFF658SGJ bed narrowPeak optimal idr thresholded peaks ENCSR124BJR ChIP-seq EFO:0002067 K562 cell line Homo sapiens ETV6-human ENCAB997CJG DNA False 2014-07-07 ENCODE 1, 2 ENCFF419RSJ, ENCFF460HJU, ENCFF484FZK, ENCFF899ZVN 46712 ENCODE Processing Pipeline 4de570718b1b7ba652606e67430ff594 https://www.encodeproject.org/files/ENCFF658SGJ/@@download/ENCFF658SGJ.bed.gz GRCh38 released borderline replicate concordance, low read depth, low read length ENCFF787DQV bigBed narrowPeak optimal idr thresholded peaks ENCSR124BJR ChIP-seq EFO:0002067 K562 cell line Homo sapiens ETV6-human ENCAB997CJG DNA False 2014-07-07 ENCODE 1, 2 ENCFF658SGJ 134233 ENCODE Processing Pipeline 5724b6d6cc351a19d6ce2c6e03340a41 https://www.encodeproject.org/files/ENCFF787DQV/@@download/ENCFF787DQV.bigBed GRCh38 released borderline replicate concordance, low read depth, low read length ENCFF349MIY fastq reads ENCSR744WOO ChIP-seq EFO:0002067 K562 cell line Homo sapiens TCF12-human ENCAB506UYG DNA False 2016-10-24 ENCODE 1 1 100 paired-ended 2 ENCFF017IMJ 2075872266 Michael Snyder, Stanford f7396c330854dc664f2e27848684dd6a SRA:SRR6214159 https://www.encodeproject.org/files/ENCFF349MIY/@@download/ENCFF349MIY.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFH/ released antibody characterized with exemption ENCFF920GYM fastq reads ENCSR744WOO ChIP-seq EFO:0002067 K562 cell line Homo sapiens TCF12-human ENCAB506UYG DNA False 2016-10-24 ENCODE 2 1 100 paired-ended 1 ENCFF171QIU 2575463643 Michael Snyder, Stanford 11a1da9016da79926701c9624259f9e0 SRA:SRR6214160 https://www.encodeproject.org/files/ENCFF920GYM/@@download/ENCFF920GYM.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFD/ released antibody characterized with exemption ENCFF017IMJ fastq reads ENCSR744WOO ChIP-seq EFO:0002067 K562 cell line Homo sapiens TCF12-human ENCAB506UYG DNA False 2016-10-24 ENCODE 1 1 100 paired-ended 1 ENCFF349MIY 2086569253 Michael Snyder, Stanford da58c2252770d023815075115aad1c18 SRA:SRR6214159 https://www.encodeproject.org/files/ENCFF017IMJ/@@download/ENCFF017IMJ.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFF/ released antibody characterized with exemption ENCFF171QIU fastq reads ENCSR744WOO ChIP-seq EFO:0002067 K562 cell line Homo sapiens TCF12-human ENCAB506UYG DNA False 2016-10-24 ENCODE 2 1 100 paired-ended 2 ENCFF920GYM 2551777753 Michael Snyder, Stanford 6d6dbbda436156b2a5c92d64877df50d SRA:SRR6214160 https://www.encodeproject.org/files/ENCFF171QIU/@@download/ENCFF171QIU.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFA/ released antibody characterized with exemption ENCFF795XNL bam alignments ENCSR744WOO ChIP-seq EFO:0002067 K562 cell line Homo sapiens TCF12-human ENCAB506UYG DNA False 2016-10-24 ENCODE 1 100 ENCFF017IMJ, ENCFF349MIY, ENCFF807MUK 3709819467 ENCODE Processing Pipeline 47652183cd8e93c130a4cf04cbc6493a https://www.encodeproject.org/files/ENCFF795XNL/@@download/ENCFF795XNL.bam hg19 released antibody characterized with exemption ENCFF316QXZ bam alignments ENCSR744WOO ChIP-seq EFO:0002067 K562 cell line Homo sapiens TCF12-human ENCAB506UYG DNA False 2016-10-24 ENCODE 2 100 ENCFF171QIU, ENCFF807MUK, ENCFF920GYM 4708379292 ENCODE Processing Pipeline a587da96025d9d8ce74fe0a41bd5e34b https://www.encodeproject.org/files/ENCFF316QXZ/@@download/ENCFF316QXZ.bam hg19 released antibody characterized with exemption ENCFF460BPQ bam unfiltered alignments ENCSR744WOO ChIP-seq EFO:0002067 K562 cell line Homo sapiens TCF12-human ENCAB506UYG DNA False 2016-10-24 ENCODE 1 100 ENCFF017IMJ, ENCFF349MIY, ENCFF643CGH 4451211756 ENCODE Processing Pipeline 06e3eeee02962a14ab7d925b1d404d46 https://www.encodeproject.org/files/ENCFF460BPQ/@@download/ENCFF460BPQ.bam GRCh38 released antibody characterized with exemption ENCFF715AOC bam alignments ENCSR744WOO ChIP-seq EFO:0002067 K562 cell line Homo sapiens TCF12-human ENCAB506UYG DNA False 2016-10-24 ENCODE 1 100 ENCFF017IMJ, ENCFF349MIY, ENCFF643CGH 3712062830 ENCODE Processing Pipeline fac5968690fbaba3bd134c4682ed3034 https://www.encodeproject.org/files/ENCFF715AOC/@@download/ENCFF715AOC.bam GRCh38 released antibody characterized with exemption ENCFF388ZQS bam unfiltered alignments ENCSR744WOO ChIP-seq EFO:0002067 K562 cell line Homo sapiens TCF12-human ENCAB506UYG DNA False 2016-10-24 ENCODE 2 100 ENCFF171QIU, ENCFF643CGH, ENCFF920GYM 5541131138 ENCODE Processing Pipeline b6ef3fbe51fe380b7271bf426c6ee496 https://www.encodeproject.org/files/ENCFF388ZQS/@@download/ENCFF388ZQS.bam GRCh38 released antibody characterized with exemption ENCFF516TOF bam alignments ENCSR744WOO ChIP-seq EFO:0002067 K562 cell line Homo sapiens TCF12-human ENCAB506UYG DNA False 2016-10-24 ENCODE 2 100 ENCFF171QIU, ENCFF643CGH, ENCFF920GYM 4711099203 ENCODE Processing Pipeline 8f6a725f8f747df14aa60d3efcc1c596 https://www.encodeproject.org/files/ENCFF516TOF/@@download/ENCFF516TOF.bam GRCh38 released antibody characterized with exemption ENCFF491QED bigWig signal p-value ENCSR744WOO ChIP-seq EFO:0002067 K562 cell line Homo sapiens TCF12-human ENCAB506UYG DNA False 2016-10-24 ENCODE 1 ENCFF715AOC, ENCFF910IKB 1143314958 ENCODE Processing Pipeline 0a8c1219ba463660acceb28a87d7096d https://www.encodeproject.org/files/ENCFF491QED/@@download/ENCFF491QED.bigWig GRCh38 released antibody characterized with exemption ENCFF703MYE bigWig signal p-value ENCSR744WOO ChIP-seq EFO:0002067 K562 cell line Homo sapiens TCF12-human ENCAB506UYG DNA False 2016-10-24 ENCODE 2 ENCFF227IZS, ENCFF516TOF 944819293 ENCODE Processing Pipeline 1f5eb00b0143b1832a4fdf4ee92201ba https://www.encodeproject.org/files/ENCFF703MYE/@@download/ENCFF703MYE.bigWig GRCh38 released antibody characterized with exemption ENCFF882LDR bigWig signal p-value ENCSR744WOO ChIP-seq EFO:0002067 K562 cell line Homo sapiens TCF12-human ENCAB506UYG DNA False 2016-10-24 ENCODE 1, 2 ENCFF227IZS, ENCFF516TOF, ENCFF715AOC, ENCFF910IKB 2030806941 ENCODE Processing Pipeline 412e431b2cae19e4016d53a41d5cdad3 https://www.encodeproject.org/files/ENCFF882LDR/@@download/ENCFF882LDR.bigWig GRCh38 released antibody characterized with exemption ENCFF622LJZ bigWig fold change over control ENCSR744WOO ChIP-seq EFO:0002067 K562 cell line Homo sapiens TCF12-human ENCAB506UYG DNA False 2016-10-24 ENCODE 1 ENCFF715AOC, ENCFF910IKB 1063596716 ENCODE Processing Pipeline 459bc3fb3803b12c69ac6bb9cf48f8f9 https://www.encodeproject.org/files/ENCFF622LJZ/@@download/ENCFF622LJZ.bigWig GRCh38 released antibody characterized with exemption ENCFF841EBY bigWig fold change over control ENCSR744WOO ChIP-seq EFO:0002067 K562 cell line Homo sapiens TCF12-human ENCAB506UYG DNA False 2016-10-24 ENCODE 2 ENCFF227IZS, ENCFF516TOF 1158863847 ENCODE Processing Pipeline 990a8f16ddf8a5e960e9ab60abd11e4b https://www.encodeproject.org/files/ENCFF841EBY/@@download/ENCFF841EBY.bigWig GRCh38 released antibody characterized with exemption ENCFF505OTI bigWig fold change over control ENCSR744WOO ChIP-seq EFO:0002067 K562 cell line Homo sapiens TCF12-human ENCAB506UYG DNA False 2016-10-24 ENCODE 1, 2 ENCFF227IZS, ENCFF516TOF, ENCFF715AOC, ENCFF910IKB 2020743509 ENCODE Processing Pipeline 3794ce6ed5b6e82b3039dbc8b085f862 https://www.encodeproject.org/files/ENCFF505OTI/@@download/ENCFF505OTI.bigWig GRCh38 released antibody characterized with exemption ENCFF231HME bed narrowPeak peaks ENCSR744WOO ChIP-seq EFO:0002067 K562 cell line Homo sapiens TCF12-human ENCAB506UYG DNA False 2016-10-24 ENCODE 2 ENCFF227IZS, ENCFF516TOF 6500271 ENCODE Processing Pipeline ba17e5819f3161a36760a3921a55a2ce https://www.encodeproject.org/files/ENCFF231HME/@@download/ENCFF231HME.bed.gz GRCh38 released antibody characterized with exemption ENCFF912LXU bed narrowPeak optimal idr thresholded peaks ENCSR744WOO ChIP-seq EFO:0002067 K562 cell line Homo sapiens TCF12-human ENCAB506UYG DNA False 2016-10-24 ENCODE 1, 2 ENCFF231HME, ENCFF269WSX, ENCFF378QNO, ENCFF419RSJ 512986 ENCODE Processing Pipeline 5b1fd7afd9bf8cc4eff806045deca8bb https://www.encodeproject.org/files/ENCFF912LXU/@@download/ENCFF912LXU.bed.gz GRCh38 released antibody characterized with exemption ENCFF249EZG bigBed narrowPeak optimal idr thresholded peaks ENCSR744WOO ChIP-seq EFO:0002067 K562 cell line Homo sapiens TCF12-human ENCAB506UYG DNA False 2016-10-24 ENCODE 1, 2 ENCFF912LXU 1125678 ENCODE Processing Pipeline 3fd6a128aabecdae21fa364c04a148ec https://www.encodeproject.org/files/ENCFF249EZG/@@download/ENCFF249EZG.bigBed GRCh38 released antibody characterized with exemption ENCFF378QNO bed narrowPeak peaks ENCSR744WOO ChIP-seq EFO:0002067 K562 cell line Homo sapiens TCF12-human ENCAB506UYG DNA False 2016-10-24 ENCODE 1 ENCFF715AOC, ENCFF910IKB 6638817 ENCODE Processing Pipeline ef56fc5c6e73b279a71c35e457c43adf https://www.encodeproject.org/files/ENCFF378QNO/@@download/ENCFF378QNO.bed.gz GRCh38 released antibody characterized with exemption ENCFF528SUF bigBed narrowPeak peaks ENCSR744WOO ChIP-seq EFO:0002067 K562 cell line Homo sapiens TCF12-human ENCAB506UYG DNA False 2016-10-24 ENCODE 1 ENCFF378QNO 13528673 ENCODE Processing Pipeline 1e1c9a84f5a8b06031c8784921048f19 https://www.encodeproject.org/files/ENCFF528SUF/@@download/ENCFF528SUF.bigBed GRCh38 released antibody characterized with exemption ENCFF269WSX bed narrowPeak peaks ENCSR744WOO ChIP-seq EFO:0002067 K562 cell line Homo sapiens TCF12-human ENCAB506UYG DNA False 2016-10-24 ENCODE 1, 2 ENCFF227IZS, ENCFF516TOF, ENCFF715AOC, ENCFF910IKB 7189263 ENCODE Processing Pipeline b8d08fd262f954af88176d3acfb3a58b https://www.encodeproject.org/files/ENCFF269WSX/@@download/ENCFF269WSX.bed.gz GRCh38 released antibody characterized with exemption ENCFF243DCE bigBed narrowPeak conservative idr thresholded peaks ENCSR744WOO ChIP-seq EFO:0002067 K562 cell line Homo sapiens TCF12-human ENCAB506UYG DNA False 2016-10-24 ENCODE 1, 2 ENCFF619AEN 750579 ENCODE Processing Pipeline b0310316709c814655089ea6d15986ed https://www.encodeproject.org/files/ENCFF243DCE/@@download/ENCFF243DCE.bigBed GRCh38 released antibody characterized with exemption ENCFF387VHR bigBed narrowPeak peaks ENCSR744WOO ChIP-seq EFO:0002067 K562 cell line Homo sapiens TCF12-human ENCAB506UYG DNA False 2016-10-24 ENCODE 2 ENCFF231HME 11329114 ENCODE Processing Pipeline d38b33e819853f44259e51a9c21ae5e4 https://www.encodeproject.org/files/ENCFF387VHR/@@download/ENCFF387VHR.bigBed GRCh38 released antibody characterized with exemption ENCFF841IQQ bigBed narrowPeak peaks ENCSR744WOO ChIP-seq EFO:0002067 K562 cell line Homo sapiens TCF12-human ENCAB506UYG DNA False 2016-10-24 ENCODE 1, 2 ENCFF269WSX 13494354 ENCODE Processing Pipeline 81dfa2335df479009a157412e4c394ee https://www.encodeproject.org/files/ENCFF841IQQ/@@download/ENCFF841IQQ.bigBed GRCh38 released antibody characterized with exemption ENCFF619AEN bed narrowPeak conservative idr thresholded peaks ENCSR744WOO ChIP-seq EFO:0002067 K562 cell line Homo sapiens TCF12-human ENCAB506UYG DNA False 2016-10-24 ENCODE 1, 2 ENCFF231HME, ENCFF269WSX, ENCFF378QNO, ENCFF419RSJ 404912 ENCODE Processing Pipeline 63061bf463563b29a07f88d089140ed8 https://www.encodeproject.org/files/ENCFF619AEN/@@download/ENCFF619AEN.bed.gz GRCh38 released antibody characterized with exemption ENCFF615DLD bam unfiltered alignments ENCSR744WOO ChIP-seq EFO:0002067 K562 cell line Homo sapiens TCF12-human ENCAB506UYG DNA False 2016-10-24 ENCODE 1 100 ENCFF017IMJ, ENCFF349MIY, ENCFF807MUK 4447881227 ENCODE Processing Pipeline c615ea3c603ec8765a4119f924a92f39 https://www.encodeproject.org/files/ENCFF615DLD/@@download/ENCFF615DLD.bam hg19 released antibody characterized with exemption ENCFF490NLT bam unfiltered alignments ENCSR744WOO ChIP-seq EFO:0002067 K562 cell line Homo sapiens TCF12-human ENCAB506UYG DNA False 2016-10-24 ENCODE 2 100 ENCFF171QIU, ENCFF807MUK, ENCFF920GYM 5535631191 ENCODE Processing Pipeline 6087954628eb918345120c29f5bddd82 https://www.encodeproject.org/files/ENCFF490NLT/@@download/ENCFF490NLT.bam hg19 released antibody characterized with exemption ENCFF611YKV bigWig signal p-value ENCSR744WOO ChIP-seq EFO:0002067 K562 cell line Homo sapiens TCF12-human ENCAB506UYG DNA False 2016-10-24 ENCODE 2 ENCFF051LWI, ENCFF316QXZ 1111175796 ENCODE Processing Pipeline 3805a48bbfa6bd6fd35c152ba0f6d661 https://www.encodeproject.org/files/ENCFF611YKV/@@download/ENCFF611YKV.bigWig hg19 released antibody characterized with exemption ENCFF007BTP bigWig fold change over control ENCSR744WOO ChIP-seq EFO:0002067 K562 cell line Homo sapiens TCF12-human ENCAB506UYG DNA False 2016-10-24 ENCODE 2 ENCFF051LWI, ENCFF316QXZ 1158724730 ENCODE Processing Pipeline ca220fa4bafa81afe3df805edcdc56be https://www.encodeproject.org/files/ENCFF007BTP/@@download/ENCFF007BTP.bigWig hg19 released antibody characterized with exemption ENCFF870JMX bed narrowPeak peaks ENCSR744WOO ChIP-seq EFO:0002067 K562 cell line Homo sapiens TCF12-human ENCAB506UYG DNA False 2016-10-24 ENCODE 1 ENCFF581ZJL, ENCFF795XNL 6627135 ENCODE Processing Pipeline 1936337eec37b48544e0fc591363ca1b https://www.encodeproject.org/files/ENCFF870JMX/@@download/ENCFF870JMX.bed.gz hg19 released antibody characterized with exemption ENCFF578MTS bigBed narrowPeak peaks ENCSR744WOO ChIP-seq EFO:0002067 K562 cell line Homo sapiens TCF12-human ENCAB506UYG DNA False 2016-10-24 ENCODE 1 ENCFF870JMX 13509808 ENCODE Processing Pipeline e19df2488c6abcdbc76937f2eddde950 https://www.encodeproject.org/files/ENCFF578MTS/@@download/ENCFF578MTS.bigBed hg19 released antibody characterized with exemption ENCFF493TZM bed narrowPeak optimal idr thresholded peaks ENCSR744WOO ChIP-seq EFO:0002067 K562 cell line Homo sapiens TCF12-human ENCAB506UYG DNA False 2016-10-24 ENCODE 1, 2 ENCFF001TDO, ENCFF334SEU, ENCFF337ISL, ENCFF870JMX 509065 ENCODE Processing Pipeline 3683eb367b6ea3aaab2799d3a4abd218 https://www.encodeproject.org/files/ENCFF493TZM/@@download/ENCFF493TZM.bed.gz hg19 released antibody characterized with exemption ENCFF573SBF bigWig signal p-value ENCSR744WOO ChIP-seq EFO:0002067 K562 cell line Homo sapiens TCF12-human ENCAB506UYG DNA False 2016-10-24 ENCODE 1 ENCFF581ZJL, ENCFF795XNL 1014246300 ENCODE Processing Pipeline 85e4dc5dc90aebbb28127db5842f9176 https://www.encodeproject.org/files/ENCFF573SBF/@@download/ENCFF573SBF.bigWig hg19 released antibody characterized with exemption ENCFF307HCN bigWig signal p-value ENCSR744WOO ChIP-seq EFO:0002067 K562 cell line Homo sapiens TCF12-human ENCAB506UYG DNA False 2016-10-24 ENCODE 1, 2 ENCFF051LWI, ENCFF316QXZ, ENCFF581ZJL, ENCFF795XNL 1915830876 ENCODE Processing Pipeline cf39bf3cbdacb3314ddea33ff082b380 https://www.encodeproject.org/files/ENCFF307HCN/@@download/ENCFF307HCN.bigWig hg19 released antibody characterized with exemption ENCFF996MSD bigWig fold change over control ENCSR744WOO ChIP-seq EFO:0002067 K562 cell line Homo sapiens TCF12-human ENCAB506UYG DNA False 2016-10-24 ENCODE 1 ENCFF581ZJL, ENCFF795XNL 1032984689 ENCODE Processing Pipeline 0aebe6ef1b46888c9977fd17b6db56a6 https://www.encodeproject.org/files/ENCFF996MSD/@@download/ENCFF996MSD.bigWig hg19 released antibody characterized with exemption ENCFF471XQM bigWig fold change over control ENCSR744WOO ChIP-seq EFO:0002067 K562 cell line Homo sapiens TCF12-human ENCAB506UYG DNA False 2016-10-24 ENCODE 1, 2 ENCFF051LWI, ENCFF316QXZ, ENCFF581ZJL, ENCFF795XNL 2069942005 ENCODE Processing Pipeline d407aa1cacacc50c90e02629744fa1a8 https://www.encodeproject.org/files/ENCFF471XQM/@@download/ENCFF471XQM.bigWig hg19 released antibody characterized with exemption ENCFF337ISL bed narrowPeak peaks ENCSR744WOO ChIP-seq EFO:0002067 K562 cell line Homo sapiens TCF12-human ENCAB506UYG DNA False 2016-10-24 ENCODE 2 ENCFF051LWI, ENCFF316QXZ 6500158 ENCODE Processing Pipeline ea9c81a1b970ba86b392f3154ebd0115 https://www.encodeproject.org/files/ENCFF337ISL/@@download/ENCFF337ISL.bed.gz hg19 released antibody characterized with exemption ENCFF334SEU bed narrowPeak peaks ENCSR744WOO ChIP-seq EFO:0002067 K562 cell line Homo sapiens TCF12-human ENCAB506UYG DNA False 2016-10-24 ENCODE 1, 2 ENCFF051LWI, ENCFF316QXZ, ENCFF581ZJL, ENCFF795XNL 7187022 ENCODE Processing Pipeline 972dd524ce2b7557d282612e7c086b19 https://www.encodeproject.org/files/ENCFF334SEU/@@download/ENCFF334SEU.bed.gz hg19 released antibody characterized with exemption ENCFF708JXD bigBed narrowPeak peaks ENCSR744WOO ChIP-seq EFO:0002067 K562 cell line Homo sapiens TCF12-human ENCAB506UYG DNA False 2016-10-24 ENCODE 2 ENCFF337ISL 11314783 ENCODE Processing Pipeline b433b6845d99836baebaf803248c6fad https://www.encodeproject.org/files/ENCFF708JXD/@@download/ENCFF708JXD.bigBed hg19 released antibody characterized with exemption ENCFF807SPC bigBed narrowPeak peaks ENCSR744WOO ChIP-seq EFO:0002067 K562 cell line Homo sapiens TCF12-human ENCAB506UYG DNA False 2016-10-24 ENCODE 1, 2 ENCFF334SEU 13484434 ENCODE Processing Pipeline 35cac36a2354d069aeeffb9f1b31ac37 https://www.encodeproject.org/files/ENCFF807SPC/@@download/ENCFF807SPC.bigBed hg19 released antibody characterized with exemption ENCFF139SRI bed narrowPeak conservative idr thresholded peaks ENCSR744WOO ChIP-seq EFO:0002067 K562 cell line Homo sapiens TCF12-human ENCAB506UYG DNA False 2016-10-24 ENCODE 1, 2 ENCFF001TDO, ENCFF334SEU, ENCFF337ISL, ENCFF870JMX 402824 ENCODE Processing Pipeline 603c30db2124ed38ab65a75b2e2e15ff https://www.encodeproject.org/files/ENCFF139SRI/@@download/ENCFF139SRI.bed.gz hg19 released antibody characterized with exemption ENCFF330ZKU bigBed narrowPeak conservative idr thresholded peaks ENCSR744WOO ChIP-seq EFO:0002067 K562 cell line Homo sapiens TCF12-human ENCAB506UYG DNA False 2016-10-24 ENCODE 1, 2 ENCFF139SRI 746161 ENCODE Processing Pipeline 23cb14069c069d605b9200e3f3064f5d https://www.encodeproject.org/files/ENCFF330ZKU/@@download/ENCFF330ZKU.bigBed hg19 released antibody characterized with exemption ENCFF865DQO bigBed narrowPeak optimal idr thresholded peaks ENCSR744WOO ChIP-seq EFO:0002067 K562 cell line Homo sapiens TCF12-human ENCAB506UYG DNA False 2016-10-24 ENCODE 1, 2 ENCFF493TZM 1116728 ENCODE Processing Pipeline 9921343315359621e52feb7e70818fc8 https://www.encodeproject.org/files/ENCFF865DQO/@@download/ENCFF865DQO.bigBed hg19 released antibody characterized with exemption ENCFF009OJF bam unfiltered alignments ENCSR440VKE ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ADNP-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 50 ENCFF516GOL, ENCFF807MUK 1098827875 ENCODE Processing Pipeline 968ad78b952c76f8539ce860132785f7 https://www.encodeproject.org/files/ENCFF009OJF/@@download/ENCFF009OJF.bam hg19 released low read depth, missing genetic modification characterization ENCFF256CWL bam unfiltered alignments ENCSR440VKE ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ADNP-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 50 ENCFF652IDC, ENCFF807MUK 1446823520 ENCODE Processing Pipeline 28426b49dba38452d491becd667406ce https://www.encodeproject.org/files/ENCFF256CWL/@@download/ENCFF256CWL.bam hg19 released low read depth, missing genetic modification characterization ENCFF516GOL fastq reads ENCSR440VKE ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ADNP-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 1 50 single-ended 1005829869 Kevin White, UChicago ea6295872952de8e13949d4ed643335d SRA:SRR6213521 https://www.encodeproject.org/files/ENCFF516GOL/@@download/ENCFF516GOL.fastq.gz Illumina HiSeq 2500 /files/ENCFF080EHD/, /files/ENCFF165PUN/ released low read depth, missing genetic modification characterization ENCFF652IDC fastq reads ENCSR440VKE ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ADNP-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 1 50 single-ended 1335169925 Kevin White, UChicago 9769b2964c82e79a992541e8749e17a2 SRA:SRR6213520 https://www.encodeproject.org/files/ENCFF652IDC/@@download/ENCFF652IDC.fastq.gz Illumina HiSeq 2500 /files/ENCFF080EHD/, /files/ENCFF165PUN/ released low read depth, missing genetic modification characterization ENCFF479XRX bam alignments ENCSR440VKE ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ADNP-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 50 ENCFF652IDC, ENCFF807MUK 1138556853 ENCODE Processing Pipeline f6b028f702cb3f8cec326d38f8b66fdd https://www.encodeproject.org/files/ENCFF479XRX/@@download/ENCFF479XRX.bam hg19 released low read depth, missing genetic modification characterization ENCFF783CXK bam alignments ENCSR440VKE ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ADNP-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 50 ENCFF516GOL, ENCFF807MUK 864675233 ENCODE Processing Pipeline 0cb4ad96e32a5ae8bd5d109f04fe1054 https://www.encodeproject.org/files/ENCFF783CXK/@@download/ENCFF783CXK.bam hg19 released low read depth, missing genetic modification characterization ENCFF049ICF bigWig signal p-value ENCSR440VKE ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ADNP-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF479XRX, ENCFF503YHD 684753952 ENCODE Processing Pipeline 6ca9d65a5aef5ecb1967d6331be94a99 https://www.encodeproject.org/files/ENCFF049ICF/@@download/ENCFF049ICF.bigWig hg19 released low read depth, missing genetic modification characterization ENCFF414DFZ bigWig signal p-value ENCSR440VKE ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ADNP-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF503YHD, ENCFF783CXK 503401537 ENCODE Processing Pipeline eba942d34cdb588a7b98497997560b17 https://www.encodeproject.org/files/ENCFF414DFZ/@@download/ENCFF414DFZ.bigWig hg19 released low read depth, missing genetic modification characterization ENCFF509LKC bigWig signal p-value ENCSR440VKE ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ADNP-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF479XRX, ENCFF503YHD, ENCFF783CXK 819159117 ENCODE Processing Pipeline 741b86d41c4aac211900b4c28083f625 https://www.encodeproject.org/files/ENCFF509LKC/@@download/ENCFF509LKC.bigWig hg19 released low read depth, missing genetic modification characterization ENCFF660MCI bigWig fold change over control ENCSR440VKE ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ADNP-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF479XRX, ENCFF503YHD 699547308 ENCODE Processing Pipeline 8bce40cb56ae06cee09cfe6619d8255d https://www.encodeproject.org/files/ENCFF660MCI/@@download/ENCFF660MCI.bigWig hg19 released low read depth, missing genetic modification characterization ENCFF185CUQ bigWig fold change over control ENCSR440VKE ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ADNP-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF503YHD, ENCFF783CXK 604209323 ENCODE Processing Pipeline 438d15e39eff36416de11a75c9745a21 https://www.encodeproject.org/files/ENCFF185CUQ/@@download/ENCFF185CUQ.bigWig hg19 released low read depth, missing genetic modification characterization ENCFF821EOT bigBed narrowPeak peaks ENCSR440VKE ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ADNP-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF603BTL 12423545 ENCODE Processing Pipeline 64c2affce9884a407b81f83289202fda https://www.encodeproject.org/files/ENCFF821EOT/@@download/ENCFF821EOT.bigBed hg19 released low read depth, missing genetic modification characterization ENCFF946EOR bigWig fold change over control ENCSR440VKE ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ADNP-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF479XRX, ENCFF503YHD, ENCFF783CXK 940813364 ENCODE Processing Pipeline fc793b93a7fd1037c331765424a2d5e4 https://www.encodeproject.org/files/ENCFF946EOR/@@download/ENCFF946EOR.bigWig hg19 released low read depth, missing genetic modification characterization ENCFF590LRH bed narrowPeak peaks ENCSR440VKE ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ADNP-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF479XRX, ENCFF503YHD 7126045 ENCODE Processing Pipeline c4dd620d8cb73921a71e311ff1644875 https://www.encodeproject.org/files/ENCFF590LRH/@@download/ENCFF590LRH.bed.gz hg19 released low read depth, missing genetic modification characterization ENCFF603BTL bed narrowPeak peaks ENCSR440VKE ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ADNP-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF503YHD, ENCFF783CXK 7009038 ENCODE Processing Pipeline 4d3412ad428852982210ca66bd1e37a2 https://www.encodeproject.org/files/ENCFF603BTL/@@download/ENCFF603BTL.bed.gz hg19 released low read depth, missing genetic modification characterization ENCFF748XDB bed narrowPeak peaks ENCSR440VKE ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ADNP-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF479XRX, ENCFF503YHD, ENCFF783CXK 7269760 ENCODE Processing Pipeline c5fac7fdbbf59314cecc01c9477e6fbf https://www.encodeproject.org/files/ENCFF748XDB/@@download/ENCFF748XDB.bed.gz hg19 released low read depth, missing genetic modification characterization ENCFF289ZGP bigBed narrowPeak peaks ENCSR440VKE ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ADNP-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF748XDB 12331921 ENCODE Processing Pipeline 8f6232153fee28a88bfea07431460973 https://www.encodeproject.org/files/ENCFF289ZGP/@@download/ENCFF289ZGP.bigBed hg19 released low read depth, missing genetic modification characterization ENCFF336YHV bigBed narrowPeak peaks ENCSR440VKE ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ADNP-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF590LRH 12473230 ENCODE Processing Pipeline c0d313873a8c87eff5574993f3615f75 https://www.encodeproject.org/files/ENCFF336YHV/@@download/ENCFF336YHV.bigBed hg19 released low read depth, missing genetic modification characterization ENCFF591QMG bam unfiltered alignments ENCSR440VKE ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ADNP-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 50 ENCFF643CGH, ENCFF652IDC 1450210980 ENCODE Processing Pipeline 1953fff7724945a81a2c98feee986a73 https://www.encodeproject.org/files/ENCFF591QMG/@@download/ENCFF591QMG.bam GRCh38 released low read depth, missing genetic modification characterization ENCFF072MZF bam unfiltered alignments ENCSR440VKE ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ADNP-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 50 ENCFF516GOL, ENCFF643CGH 1101084341 ENCODE Processing Pipeline 625dec524cc2b762c6ae1e1fe75b4ca6 https://www.encodeproject.org/files/ENCFF072MZF/@@download/ENCFF072MZF.bam GRCh38 released low read depth, missing genetic modification characterization ENCFF540ZTB bam alignments ENCSR440VKE ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ADNP-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 50 ENCFF516GOL, ENCFF643CGH 864322626 ENCODE Processing Pipeline 6905976d24991e396c9701347b4c18b9 https://www.encodeproject.org/files/ENCFF540ZTB/@@download/ENCFF540ZTB.bam GRCh38 released low read depth, missing genetic modification characterization ENCFF666EIZ bam alignments ENCSR440VKE ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ADNP-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 50 ENCFF643CGH, ENCFF652IDC 1138158002 ENCODE Processing Pipeline e13bd171fbcc1a5c5a27619b1cc1d176 https://www.encodeproject.org/files/ENCFF666EIZ/@@download/ENCFF666EIZ.bam GRCh38 released low read depth, missing genetic modification characterization ENCFF657FLG bigWig signal p-value ENCSR440VKE ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ADNP-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF609HLC, ENCFF666EIZ 603830412 ENCODE Processing Pipeline 709ecd18852fd068261742a686dc743a https://www.encodeproject.org/files/ENCFF657FLG/@@download/ENCFF657FLG.bigWig GRCh38 released low read depth, missing genetic modification characterization ENCFF085CHM bigWig signal p-value ENCSR440VKE ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ADNP-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF540ZTB, ENCFF609HLC 512788926 ENCODE Processing Pipeline b3ab08c45c7c5f00ebd8b7cafb4d51f8 https://www.encodeproject.org/files/ENCFF085CHM/@@download/ENCFF085CHM.bigWig GRCh38 released low read depth, missing genetic modification characterization ENCFF693PZX bigWig signal p-value ENCSR440VKE ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ADNP-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF540ZTB, ENCFF609HLC, ENCFF666EIZ 816216584 ENCODE Processing Pipeline 117223b5547cc14853d0aad572ac4c55 https://www.encodeproject.org/files/ENCFF693PZX/@@download/ENCFF693PZX.bigWig GRCh38 released low read depth, missing genetic modification characterization ENCFF177JJR bigWig fold change over control ENCSR440VKE ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ADNP-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF609HLC, ENCFF666EIZ 700899929 ENCODE Processing Pipeline 22a0d9811e30cf739637a75a01e3597a https://www.encodeproject.org/files/ENCFF177JJR/@@download/ENCFF177JJR.bigWig GRCh38 released low read depth, missing genetic modification characterization ENCFF834WWY bigWig fold change over control ENCSR440VKE ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ADNP-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF540ZTB, ENCFF609HLC 615760309 ENCODE Processing Pipeline 26c3551d8c0dfcc371638374f0be2c30 https://www.encodeproject.org/files/ENCFF834WWY/@@download/ENCFF834WWY.bigWig GRCh38 released low read depth, missing genetic modification characterization ENCFF340UTP bigWig fold change over control ENCSR440VKE ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ADNP-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF540ZTB, ENCFF609HLC, ENCFF666EIZ 934868078 ENCODE Processing Pipeline 73640de32f41f720242e002ace516b1e https://www.encodeproject.org/files/ENCFF340UTP/@@download/ENCFF340UTP.bigWig GRCh38 released low read depth, missing genetic modification characterization ENCFF827OBX bed narrowPeak peaks ENCSR440VKE ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ADNP-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF540ZTB, ENCFF609HLC 6920685 ENCODE Processing Pipeline 68f2d01dba737b3b6e74223ed81289de https://www.encodeproject.org/files/ENCFF827OBX/@@download/ENCFF827OBX.bed.gz GRCh38 released low read depth, missing genetic modification characterization ENCFF836SVL bed narrowPeak peaks ENCSR440VKE ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ADNP-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF609HLC, ENCFF666EIZ 7045570 ENCODE Processing Pipeline 2cc3e244bc2ab1cbd8537d2d33cf1377 https://www.encodeproject.org/files/ENCFF836SVL/@@download/ENCFF836SVL.bed.gz GRCh38 released low read depth, missing genetic modification characterization ENCFF903TXM bigBed narrowPeak peaks ENCSR440VKE ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ADNP-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF295TTE 12334237 ENCODE Processing Pipeline c53ae21925d9bd506ad6da2e43169315 https://www.encodeproject.org/files/ENCFF903TXM/@@download/ENCFF903TXM.bigBed GRCh38 released low read depth, missing genetic modification characterization ENCFF295TTE bed narrowPeak peaks ENCSR440VKE ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ADNP-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF540ZTB, ENCFF609HLC, ENCFF666EIZ 7236886 ENCODE Processing Pipeline 7c385676ff72f84b83c12d4fad863ecb https://www.encodeproject.org/files/ENCFF295TTE/@@download/ENCFF295TTE.bed.gz GRCh38 released low read depth, missing genetic modification characterization ENCFF645NRG bigBed narrowPeak peaks ENCSR440VKE ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ADNP-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF827OBX 12422380 ENCODE Processing Pipeline 9459f5a75462617b84ecd9e109a0be34 https://www.encodeproject.org/files/ENCFF645NRG/@@download/ENCFF645NRG.bigBed GRCh38 released low read depth, missing genetic modification characterization ENCFF740DZV bigBed narrowPeak conservative idr thresholded peaks ENCSR440VKE ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ADNP-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF003MTQ 816410 ENCODE Processing Pipeline bea424c44ac6eac0ae1830cc1d6c7fcc https://www.encodeproject.org/files/ENCFF740DZV/@@download/ENCFF740DZV.bigBed GRCh38 released low read depth, missing genetic modification characterization ENCFF231KUA bigBed narrowPeak optimal idr thresholded peaks ENCSR440VKE ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ADNP-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF817ARM 984869 ENCODE Processing Pipeline 0279c8c81c3370e802832f06e19d12ea https://www.encodeproject.org/files/ENCFF231KUA/@@download/ENCFF231KUA.bigBed GRCh38 released low read depth, missing genetic modification characterization ENCFF003MTQ bed narrowPeak conservative idr thresholded peaks ENCSR440VKE ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ADNP-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF295TTE, ENCFF419RSJ, ENCFF827OBX, ENCFF836SVL 393067 ENCODE Processing Pipeline 5e03d2e650a7f229a61df5ae8907700b https://www.encodeproject.org/files/ENCFF003MTQ/@@download/ENCFF003MTQ.bed.gz GRCh38 released low read depth, missing genetic modification characterization ENCFF591GVI bigBed narrowPeak peaks ENCSR440VKE ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ADNP-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF836SVL 12486875 ENCODE Processing Pipeline 3de762ccdad773ab84a1bcba5d6c2c84 https://www.encodeproject.org/files/ENCFF591GVI/@@download/ENCFF591GVI.bigBed GRCh38 released low read depth, missing genetic modification characterization ENCFF817ARM bed narrowPeak optimal idr thresholded peaks ENCSR440VKE ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ADNP-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF295TTE, ENCFF419RSJ, ENCFF827OBX, ENCFF836SVL 401684 ENCODE Processing Pipeline 89c7f08b01d55a381b810fbd45dd5481 https://www.encodeproject.org/files/ENCFF817ARM/@@download/ENCFF817ARM.bed.gz GRCh38 released low read depth, missing genetic modification characterization ENCFF219ZRU bed narrowPeak conservative idr thresholded peaks ENCSR440VKE ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ADNP-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF001TDO, ENCFF590LRH, ENCFF603BTL, ENCFF748XDB 325491 ENCODE Processing Pipeline 51e3bb743f954592f2e9b14ce8f1ef29 https://www.encodeproject.org/files/ENCFF219ZRU/@@download/ENCFF219ZRU.bed.gz hg19 released low read depth, missing genetic modification characterization ENCFF309MYM bigBed narrowPeak conservative idr thresholded peaks ENCSR440VKE ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ADNP-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF219ZRU 586862 ENCODE Processing Pipeline eaf77892a2c65150112fe2ba071b8347 https://www.encodeproject.org/files/ENCFF309MYM/@@download/ENCFF309MYM.bigBed hg19 released low read depth, missing genetic modification characterization ENCFF396GUH bed narrowPeak optimal idr thresholded peaks ENCSR440VKE ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ADNP-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF001TDO, ENCFF590LRH, ENCFF603BTL, ENCFF748XDB 328085 ENCODE Processing Pipeline c0f9021391f0142e862d9de195e2fccc https://www.encodeproject.org/files/ENCFF396GUH/@@download/ENCFF396GUH.bed.gz hg19 released low read depth, missing genetic modification characterization ENCFF087HQG bigBed narrowPeak optimal idr thresholded peaks ENCSR440VKE ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ADNP-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF396GUH 590103 ENCODE Processing Pipeline f2ae56591e340d9df9251eba9aa33fa2 https://www.encodeproject.org/files/ENCFF087HQG/@@download/ENCFF087HQG.bigBed hg19 released low read depth, missing genetic modification characterization ENCFF715ELD bam unfiltered alignments ENCSR608HVP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-KLF13-human ENCAB728YTO DNA False 2016-03-02 ENCODE 2 100 ENCFF519FTA, ENCFF607CQM, ENCFF807MUK 7737934520 ENCODE Processing Pipeline 0e3f653a9fa52cec0f923285bb3d2956 https://www.encodeproject.org/files/ENCFF715ELD/@@download/ENCFF715ELD.bam hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity missing control alignments ENCFF119KHE bam unfiltered alignments ENCSR608HVP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-KLF13-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1 100 ENCFF358PYP, ENCFF684JBQ, ENCFF807MUK 5792116115 ENCODE Processing Pipeline 7d56fec227b89e92c48031d2cc5eb594 https://www.encodeproject.org/files/ENCFF119KHE/@@download/ENCFF119KHE.bam hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity missing control alignments ENCFF358PYP fastq reads ENCSR608HVP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-KLF13-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1 1 100 paired-ended 1 ENCFF684JBQ 2689324638 Michael Snyder, Stanford 644a6b12a05fd8055bcedb2d6548d279 SRA:SRR5111835 https://www.encodeproject.org/files/ENCFF358PYP/@@download/ENCFF358PYP.fastq.gz Illumina HiSeq 2000 /files/ENCFF697PWI/ released borderline replicate concordance, low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity missing control alignments ENCFF519FTA fastq reads ENCSR608HVP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-KLF13-human ENCAB728YTO DNA False 2016-03-02 ENCODE 2 1 100 paired-ended 1 ENCFF607CQM 3510850911 Michael Snyder, Stanford eca8bda3047653b0119071cf4dbb9d5f SRA:SRR5111834 https://www.encodeproject.org/files/ENCFF519FTA/@@download/ENCFF519FTA.fastq.gz Illumina HiSeq 2000 /files/ENCFF697PWI/ released borderline replicate concordance, low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity missing control alignments ENCFF684JBQ fastq reads ENCSR608HVP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-KLF13-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1 1 100 paired-ended 2 ENCFF358PYP 2722456132 Michael Snyder, Stanford 49b7243d6e800b84deeecef3f03868cf SRA:SRR5111835 https://www.encodeproject.org/files/ENCFF684JBQ/@@download/ENCFF684JBQ.fastq.gz Illumina HiSeq 2000 /files/ENCFF486HGM/ released borderline replicate concordance, low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity missing control alignments ENCFF607CQM fastq reads ENCSR608HVP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-KLF13-human ENCAB728YTO DNA False 2016-03-02 ENCODE 2 1 100 paired-ended 2 ENCFF519FTA 3547218126 Michael Snyder, Stanford 2cd6d3ea11095dc05f975bd94075f65e SRA:SRR5111834 https://www.encodeproject.org/files/ENCFF607CQM/@@download/ENCFF607CQM.fastq.gz Illumina HiSeq 2000 /files/ENCFF486HGM/ released borderline replicate concordance, low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity missing control alignments ENCFF708ZXK bam alignments ENCSR608HVP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-KLF13-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1 100 ENCFF358PYP, ENCFF684JBQ, ENCFF807MUK 3779657404 ENCODE Processing Pipeline c60ffeee94ef61ca65ca88a526496d64 https://www.encodeproject.org/files/ENCFF708ZXK/@@download/ENCFF708ZXK.bam hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity missing control alignments ENCFF169LKQ bam alignments ENCSR608HVP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-KLF13-human ENCAB728YTO DNA False 2016-03-02 ENCODE 2 100 ENCFF519FTA, ENCFF607CQM, ENCFF807MUK 6325586843 ENCODE Processing Pipeline 0f762170d89fc16c20a17072b5f4514e https://www.encodeproject.org/files/ENCFF169LKQ/@@download/ENCFF169LKQ.bam hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity missing control alignments ENCFF630QQM bigWig signal p-value ENCSR608HVP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-KLF13-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1 ENCFF563OVT, ENCFF708ZXK 859881012 ENCODE Processing Pipeline 59f34899f8cda6a2f7adc18cce16769e https://www.encodeproject.org/files/ENCFF630QQM/@@download/ENCFF630QQM.bigWig hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity missing control alignments ENCFF645XKW bigWig signal p-value ENCSR608HVP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-KLF13-human ENCAB728YTO DNA False 2016-03-02 ENCODE 2 ENCFF169LKQ, ENCFF563OVT 1074220295 ENCODE Processing Pipeline 807470513bec26d303e39135c0a2b58e https://www.encodeproject.org/files/ENCFF645XKW/@@download/ENCFF645XKW.bigWig hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity missing control alignments ENCFF260RPO bigWig signal p-value ENCSR608HVP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-KLF13-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF169LKQ, ENCFF563OVT, ENCFF708ZXK 1376429982 ENCODE Processing Pipeline d04277d0376904dee29b2df336fca57d https://www.encodeproject.org/files/ENCFF260RPO/@@download/ENCFF260RPO.bigWig hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity missing control alignments ENCFF800KSB bigWig fold change over control ENCSR608HVP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-KLF13-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1 ENCFF563OVT, ENCFF708ZXK 922405486 ENCODE Processing Pipeline 9fe341a73d05971713c567093f9777da https://www.encodeproject.org/files/ENCFF800KSB/@@download/ENCFF800KSB.bigWig hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity missing control alignments ENCFF991UQW bigWig fold change over control ENCSR608HVP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-KLF13-human ENCAB728YTO DNA False 2016-03-02 ENCODE 2 ENCFF169LKQ, ENCFF563OVT 1289880045 ENCODE Processing Pipeline 5ada8b0fd5606b15cb30aa38bd255153 https://www.encodeproject.org/files/ENCFF991UQW/@@download/ENCFF991UQW.bigWig hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity missing control alignments ENCFF229SYD bigWig fold change over control ENCSR608HVP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-KLF13-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF169LKQ, ENCFF563OVT, ENCFF708ZXK 1703851808 ENCODE Processing Pipeline 9c0375027f9b630a509dec17ed32b036 https://www.encodeproject.org/files/ENCFF229SYD/@@download/ENCFF229SYD.bigWig hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity missing control alignments ENCFF367KYN bed narrowPeak peaks ENCSR608HVP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-KLF13-human ENCAB728YTO DNA False 2016-03-02 ENCODE 2 ENCFF169LKQ, ENCFF563OVT 6402393 ENCODE Processing Pipeline 4b7df7883c2538296b947e03cbc3ab8d https://www.encodeproject.org/files/ENCFF367KYN/@@download/ENCFF367KYN.bed.gz hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity missing control alignments ENCFF119DBB bed narrowPeak peaks ENCSR608HVP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-KLF13-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1 ENCFF563OVT, ENCFF708ZXK 5808722 ENCODE Processing Pipeline 61b7ec4a83f998815e2e8b035034a85c https://www.encodeproject.org/files/ENCFF119DBB/@@download/ENCFF119DBB.bed.gz hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity missing control alignments ENCFF013RUD bigBed narrowPeak peaks ENCSR608HVP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-KLF13-human ENCAB728YTO DNA False 2016-03-02 ENCODE 2 ENCFF367KYN 11216954 ENCODE Processing Pipeline f1c7510d3cec16657e8ed2b0d47c9f6f https://www.encodeproject.org/files/ENCFF013RUD/@@download/ENCFF013RUD.bigBed hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity missing control alignments ENCFF258DEA bigBed narrowPeak peaks ENCSR608HVP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-KLF13-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF163SYH 13388829 ENCODE Processing Pipeline 1e3b334d2593a33c9d4c13f653468649 https://www.encodeproject.org/files/ENCFF258DEA/@@download/ENCFF258DEA.bigBed hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity missing control alignments ENCFF163SYH bed narrowPeak peaks ENCSR608HVP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-KLF13-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF169LKQ, ENCFF563OVT, ENCFF708ZXK 7095681 ENCODE Processing Pipeline 207f90c80050a48c07e83c72c794639f https://www.encodeproject.org/files/ENCFF163SYH/@@download/ENCFF163SYH.bed.gz hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity missing control alignments ENCFF203IKW bigBed narrowPeak peaks ENCSR608HVP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-KLF13-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1 ENCFF119DBB 11292579 ENCODE Processing Pipeline dfaa45011275df2ec4cf909ccc1ab6a0 https://www.encodeproject.org/files/ENCFF203IKW/@@download/ENCFF203IKW.bigBed hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity missing control alignments ENCFF046OVB bam unfiltered alignments ENCSR608HVP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-KLF13-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1 100 ENCFF358PYP, ENCFF643CGH, ENCFF684JBQ 5799509450 ENCODE Processing Pipeline ea965999bf3fd41e109290a9d40826c6 https://www.encodeproject.org/files/ENCFF046OVB/@@download/ENCFF046OVB.bam GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity missing control alignments ENCFF466WRX bam unfiltered alignments ENCSR608HVP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-KLF13-human ENCAB728YTO DNA False 2016-03-02 ENCODE 2 100 ENCFF519FTA, ENCFF607CQM, ENCFF643CGH 7751455846 ENCODE Processing Pipeline 284ec10693ce004a50530f714de6630e https://www.encodeproject.org/files/ENCFF466WRX/@@download/ENCFF466WRX.bam GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity missing control alignments ENCFF829XLC bam alignments ENCSR608HVP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-KLF13-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1 100 ENCFF358PYP, ENCFF643CGH, ENCFF684JBQ 3781074241 ENCODE Processing Pipeline 9ba5be4b5bd3ecc30911e165f142804b https://www.encodeproject.org/files/ENCFF829XLC/@@download/ENCFF829XLC.bam GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity missing control alignments ENCFF771KEQ bam alignments ENCSR608HVP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-KLF13-human ENCAB728YTO DNA False 2016-03-02 ENCODE 2 100 ENCFF519FTA, ENCFF607CQM, ENCFF643CGH 6328776224 ENCODE Processing Pipeline 44d76c726cbb618ee906d738047f33d7 https://www.encodeproject.org/files/ENCFF771KEQ/@@download/ENCFF771KEQ.bam GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity missing control alignments ENCFF817SSK bigWig signal p-value ENCSR608HVP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-KLF13-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1 ENCFF829XLC 1029319049 ENCODE Processing Pipeline 7e74e8137c475f3b6ebfd2c3d6da549c https://www.encodeproject.org/files/ENCFF817SSK/@@download/ENCFF817SSK.bigWig GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity missing control alignments ENCFF099PNY bigWig signal p-value ENCSR608HVP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-KLF13-human ENCAB728YTO DNA False 2016-03-02 ENCODE 2 ENCFF771KEQ 1088363978 ENCODE Processing Pipeline 8b83920a10b38857f384561bce01aea1 https://www.encodeproject.org/files/ENCFF099PNY/@@download/ENCFF099PNY.bigWig GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity missing control alignments ENCFF922MHS bigWig signal p-value ENCSR608HVP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-KLF13-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF771KEQ, ENCFF829XLC 1379460937 ENCODE Processing Pipeline 381968c825fea7c7a7b053069b882070 https://www.encodeproject.org/files/ENCFF922MHS/@@download/ENCFF922MHS.bigWig GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity missing control alignments ENCFF991QMG bigWig fold change over control ENCSR608HVP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-KLF13-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1 ENCFF829XLC 955463249 ENCODE Processing Pipeline e4a86c96db9c71de01e7b75606e3018d https://www.encodeproject.org/files/ENCFF991QMG/@@download/ENCFF991QMG.bigWig GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity missing control alignments ENCFF975TUN bigWig fold change over control ENCSR608HVP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-KLF13-human ENCAB728YTO DNA False 2016-03-02 ENCODE 2 ENCFF771KEQ 1292421681 ENCODE Processing Pipeline ac49c0b11454299322bdae10faeb7c91 https://www.encodeproject.org/files/ENCFF975TUN/@@download/ENCFF975TUN.bigWig GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity missing control alignments ENCFF314TEX bigWig fold change over control ENCSR608HVP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-KLF13-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF771KEQ, ENCFF829XLC 1707275232 ENCODE Processing Pipeline cf0824e9577aca7ecc9e7e7b6a2eeffe https://www.encodeproject.org/files/ENCFF314TEX/@@download/ENCFF314TEX.bigWig GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity missing control alignments ENCFF471VXD bed narrowPeak peaks ENCSR608HVP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-KLF13-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1 ENCFF829XLC 5668159 ENCODE Processing Pipeline a6bac39081c84d1b8c1604783a50dba4 https://www.encodeproject.org/files/ENCFF471VXD/@@download/ENCFF471VXD.bed.gz GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity missing control alignments ENCFF625AOG bed narrowPeak peaks ENCSR608HVP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-KLF13-human ENCAB728YTO DNA False 2016-03-02 ENCODE 2 ENCFF771KEQ 6257787 ENCODE Processing Pipeline ccbd56a931d20fc930e84f7b34c9fef1 https://www.encodeproject.org/files/ENCFF625AOG/@@download/ENCFF625AOG.bed.gz GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity missing control alignments ENCFF855LPG bigBed narrowPeak peaks ENCSR608HVP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-KLF13-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1 ENCFF471VXD 11288184 ENCODE Processing Pipeline ab4db346a818fd5666b903e212d1ee5f https://www.encodeproject.org/files/ENCFF855LPG/@@download/ENCFF855LPG.bigBed GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity missing control alignments ENCFF631VNO bigBed narrowPeak peaks ENCSR608HVP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-KLF13-human ENCAB728YTO DNA False 2016-03-02 ENCODE 2 ENCFF625AOG 11236463 ENCODE Processing Pipeline 4bec6c056085c049eb8bf31c502a4049 https://www.encodeproject.org/files/ENCFF631VNO/@@download/ENCFF631VNO.bigBed GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity missing control alignments ENCFF200RYV bed narrowPeak peaks ENCSR608HVP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-KLF13-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF771KEQ, ENCFF829XLC 6995284 ENCODE Processing Pipeline f0e4ea7436bf884646ce2abbff27188d https://www.encodeproject.org/files/ENCFF200RYV/@@download/ENCFF200RYV.bed.gz GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity missing control alignments ENCFF286JTK bed narrowPeak conservative idr thresholded peaks ENCSR608HVP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-KLF13-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF200RYV, ENCFF419RSJ, ENCFF471VXD, ENCFF625AOG 152294 ENCODE Processing Pipeline 11c6a1983e80e59d32f1455140ed9ae4 https://www.encodeproject.org/files/ENCFF286JTK/@@download/ENCFF286JTK.bed.gz GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity missing control alignments ENCFF022UKX bigBed narrowPeak optimal idr thresholded peaks ENCSR608HVP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-KLF13-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF381GEK 427808 ENCODE Processing Pipeline 12bd4f4d58aaf6904fff62acd09b34d4 https://www.encodeproject.org/files/ENCFF022UKX/@@download/ENCFF022UKX.bigBed GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity missing control alignments ENCFF381GEK bed narrowPeak optimal idr thresholded peaks ENCSR608HVP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-KLF13-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF200RYV, ENCFF419RSJ, ENCFF471VXD, ENCFF625AOG 224803 ENCODE Processing Pipeline 90e495f57873d7227a45d82efa759347 https://www.encodeproject.org/files/ENCFF381GEK/@@download/ENCFF381GEK.bed.gz GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity missing control alignments ENCFF574HPK bigBed narrowPeak peaks ENCSR608HVP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-KLF13-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF200RYV 13405683 ENCODE Processing Pipeline 22365a144d666da74ac9bf3f77317fdb https://www.encodeproject.org/files/ENCFF574HPK/@@download/ENCFF574HPK.bigBed GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity missing control alignments ENCFF210PRE bigBed narrowPeak conservative idr thresholded peaks ENCSR608HVP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-KLF13-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF286JTK 322673 ENCODE Processing Pipeline eb86d58c7aa1bdcb32a704f261c75597 https://www.encodeproject.org/files/ENCFF210PRE/@@download/ENCFF210PRE.bigBed GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity missing control alignments ENCFF387ZED bed narrowPeak conservative idr thresholded peaks ENCSR608HVP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-KLF13-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF001TDO, ENCFF119DBB, ENCFF163SYH, ENCFF367KYN 124796 ENCODE Processing Pipeline 1c47d766d473a12e61a1c3dc9c644db4 https://www.encodeproject.org/files/ENCFF387ZED/@@download/ENCFF387ZED.bed.gz hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity missing control alignments ENCFF643CWU bigBed narrowPeak conservative idr thresholded peaks ENCSR608HVP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-KLF13-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF387ZED 232306 ENCODE Processing Pipeline 9d6fe50023ff75ae1224663c1c1add1c https://www.encodeproject.org/files/ENCFF643CWU/@@download/ENCFF643CWU.bigBed hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity missing control alignments ENCFF802XZN bed narrowPeak optimal idr thresholded peaks ENCSR608HVP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-KLF13-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF001TDO, ENCFF119DBB, ENCFF163SYH, ENCFF367KYN 180679 ENCODE Processing Pipeline c2b97dbdcdb1a3eb640515e00cd7a237 https://www.encodeproject.org/files/ENCFF802XZN/@@download/ENCFF802XZN.bed.gz hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity missing control alignments ENCFF925KNL bigBed narrowPeak optimal idr thresholded peaks ENCSR608HVP ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-KLF13-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF802XZN 362676 ENCODE Processing Pipeline ecfd5b01017ca51fe0bc5210a685729f https://www.encodeproject.org/files/ENCFF925KNL/@@download/ENCFF925KNL.bigBed hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity missing control alignments ENCFF000PZB bam alignments ENCSR000BNE ChIP-seq EFO:0002067 K562 cell line Homo sapiens EGR1-human ENCAB000ASX DNA see document see document False 2011-07-18 ENCODE 1 ENCFF000PZK 867489576 Richard Myers, HAIB 2b523559364b24036fe3674f07b829ee https://www.encodeproject.org/files/ENCFF000PZB/@@download/ENCFF000PZB.bam hg19 archived low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF000PZC bam alignments ENCSR000BNE ChIP-seq EFO:0002067 K562 cell line Homo sapiens EGR1-human ENCAB000ASX DNA see document see document False 2011-07-18 ENCODE 2 ENCFF000PZP 1402173759 Richard Myers, HAIB 5a2f247300b27e0a1b1ac4222fef520a https://www.encodeproject.org/files/ENCFF000PZC/@@download/ENCFF000PZC.bam hg19 archived low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF000PZD bigBed broadPeak peaks ENCSR000BNE ChIP-seq EFO:0002067 K562 cell line Homo sapiens EGR1-human ENCAB000ASX DNA see document see document False 2011-07-18 ENCODE 1 1 ENCFF001UJR 915894 Richard Myers, HAIB 500e9848b44742d30d303e50becccf91 https://www.encodeproject.org/files/ENCFF000PZD/@@download/ENCFF000PZD.bigBed hg19 archived low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF000PZE bigBed broadPeak peaks ENCSR000BNE ChIP-seq EFO:0002067 K562 cell line Homo sapiens EGR1-human ENCAB000ASX DNA see document see document False 2011-07-18 ENCODE 2 1 ENCFF001UJS 736178 Richard Myers, HAIB a6b2e4b4b5fcba4d8cc9832597f937b4 https://www.encodeproject.org/files/ENCFF000PZE/@@download/ENCFF000PZE.bigBed hg19 archived low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF000PZH bigWig raw signal ENCSR000BNE ChIP-seq EFO:0002067 K562 cell line Homo sapiens EGR1-human ENCAB000ASX DNA see document see document False 2011-07-18 ENCODE 1 1 45907910 Richard Myers, HAIB d82d11631ef53cd12c3f5eacb415b09c https://www.encodeproject.org/files/ENCFF000PZH/@@download/ENCFF000PZH.bigWig hg19 archived low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample, missing derived_from control insufficient read depth ENCFF000PZI bigWig raw signal ENCSR000BNE ChIP-seq EFO:0002067 K562 cell line Homo sapiens EGR1-human ENCAB000ASX DNA see document see document False 2011-07-18 ENCODE 2 1 39441358 Richard Myers, HAIB 0d3ecd45d914db581faf6d125de473a3 https://www.encodeproject.org/files/ENCFF000PZI/@@download/ENCFF000PZI.bigWig hg19 archived low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample, missing derived_from control insufficient read depth ENCFF000PZK fastq reads ENCSR000BNE ChIP-seq EFO:0002067 K562 cell line Homo sapiens EGR1-human ENCAB000ASX DNA see document see document False 2011-07-18 ENCODE 1 1 36 single-ended 830913112 Richard Myers, HAIB f1f075f13b2f621260ef1a9270242c37 https://www.encodeproject.org/files/ENCFF000PZK/@@download/ENCFF000PZK.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000QEX/ released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF000PZP fastq reads ENCSR000BNE ChIP-seq EFO:0002067 K562 cell line Homo sapiens EGR1-human ENCAB000ASX DNA see document see document False 2011-07-18 ENCODE 2 1 36 single-ended 1344326303 Richard Myers, HAIB 14685a1532e030cd4f14d6d78d7e2e38 https://www.encodeproject.org/files/ENCFF000PZP/@@download/ENCFF000PZP.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000QEX/ released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF001UJR bed broadPeak peaks ENCSR000BNE ChIP-seq EFO:0002067 K562 cell line Homo sapiens EGR1-human ENCAB000ASX DNA see document see document False 2011-07-18 ENCODE 1 1 617800 Richard Myers, HAIB 0598cde9a4ca5b347a48186f3ae321f9 https://www.encodeproject.org/files/ENCFF001UJR/@@download/ENCFF001UJR.bed.gz hg19 archived low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample, missing derived_from control insufficient read depth ENCFF001UJS bed broadPeak peaks ENCSR000BNE ChIP-seq EFO:0002067 K562 cell line Homo sapiens EGR1-human ENCAB000ASX DNA see document see document False 2011-07-18 ENCODE 2 1 457052 Richard Myers, HAIB 395155e13146ba3c058da7bc53d2a5d5 https://www.encodeproject.org/files/ENCFF001UJS/@@download/ENCFF001UJS.bed.gz hg19 archived low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample, missing derived_from control insufficient read depth ENCFF002CLV bed narrowPeak optimal idr thresholded peaks ENCSR000BNE ChIP-seq EFO:0002067 K562 cell line Homo sapiens EGR1-human ENCAB000ASX DNA see document see document False 2011-07-18 ENCODE 754687 ENCODE Consortium Analysis Working Group 703c04df1ee5c8d5245c2751d593b317 https://www.encodeproject.org/files/ENCFF002CLV/@@download/ENCFF002CLV.bed.gz hg19 archived low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample, missing derived_from control insufficient read depth ENCFF396YCE bigBed narrowPeak optimal idr thresholded peaks ENCSR000BNE ChIP-seq EFO:0002067 K562 cell line Homo sapiens EGR1-human ENCAB000ASX DNA see document see document False 2011-07-18 ENCODE ENCFF002CLV 1848984 ENCODE Consortium 3aa8cad2f2f86b12b661228ccdda2175 https://www.encodeproject.org/files/ENCFF396YCE/@@download/ENCFF396YCE.bigBed hg19 archived low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF083SFE bam unfiltered alignments ENCSR000BNE ChIP-seq EFO:0002067 K562 cell line Homo sapiens EGR1-human ENCAB000ASX DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000PZK, ENCFF643CGH 1025218179 ENCODE Processing Pipeline f6e236d776affad72daca70a92aec3c1 https://www.encodeproject.org/files/ENCFF083SFE/@@download/ENCFF083SFE.bam GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF645IYJ bam alignments ENCSR000BNE ChIP-seq EFO:0002067 K562 cell line Homo sapiens EGR1-human ENCAB000ASX DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000PZK, ENCFF643CGH 477698469 ENCODE Processing Pipeline 2ebaef637e9456f1b62b589b7511d4f2 https://www.encodeproject.org/files/ENCFF645IYJ/@@download/ENCFF645IYJ.bam GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF148LZI bam unfiltered alignments ENCSR000BNE ChIP-seq EFO:0002067 K562 cell line Homo sapiens EGR1-human ENCAB000ASX DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000PZP, ENCFF643CGH 1741930687 ENCODE Processing Pipeline e60149a92ea5004e2d0634250b63ffb9 https://www.encodeproject.org/files/ENCFF148LZI/@@download/ENCFF148LZI.bam GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF021CMK bam alignments ENCSR000BNE ChIP-seq EFO:0002067 K562 cell line Homo sapiens EGR1-human ENCAB000ASX DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000PZP, ENCFF643CGH 1051595007 ENCODE Processing Pipeline 728a9eba80041bc0f4f02ce1f793d9a8 https://www.encodeproject.org/files/ENCFF021CMK/@@download/ENCFF021CMK.bam GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF623RBS bam unfiltered alignments ENCSR000BNE ChIP-seq EFO:0002067 K562 cell line Homo sapiens EGR1-human ENCAB000ASX DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000PZK, ENCFF807MUK 1022970828 ENCODE Processing Pipeline 913bad3ce8d463011d83284cd84c1702 https://www.encodeproject.org/files/ENCFF623RBS/@@download/ENCFF623RBS.bam hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF052PXH bam alignments ENCSR000BNE ChIP-seq EFO:0002067 K562 cell line Homo sapiens EGR1-human ENCAB000ASX DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000PZK, ENCFF807MUK 477952202 ENCODE Processing Pipeline 2ae770e1ee340a8c935a9aa2a8398147 https://www.encodeproject.org/files/ENCFF052PXH/@@download/ENCFF052PXH.bam hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF526BJV bam unfiltered alignments ENCSR000BNE ChIP-seq EFO:0002067 K562 cell line Homo sapiens EGR1-human ENCAB000ASX DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000PZP, ENCFF807MUK 1738084453 ENCODE Processing Pipeline 02a342ea1a27bf61ae516e9eb16a2a77 https://www.encodeproject.org/files/ENCFF526BJV/@@download/ENCFF526BJV.bam hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF481PJT bam alignments ENCSR000BNE ChIP-seq EFO:0002067 K562 cell line Homo sapiens EGR1-human ENCAB000ASX DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000PZP, ENCFF807MUK 1052098571 ENCODE Processing Pipeline 03de0b75e84ed721c6cb565bf3289f7d https://www.encodeproject.org/files/ENCFF481PJT/@@download/ENCFF481PJT.bam hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF815LPT bigWig fold change over control ENCSR000BNE ChIP-seq EFO:0002067 K562 cell line Homo sapiens EGR1-human ENCAB000ASX DNA see document see document False 2011-07-18 ENCODE 2 ENCFF021CMK, ENCFF772PJM 349851143 ENCODE Processing Pipeline 37b343d66be9579fd670c3798a08190b https://www.encodeproject.org/files/ENCFF815LPT/@@download/ENCFF815LPT.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF526PCX bigWig signal p-value ENCSR000BNE ChIP-seq EFO:0002067 K562 cell line Homo sapiens EGR1-human ENCAB000ASX DNA see document see document False 2011-07-18 ENCODE 1 ENCFF645IYJ, ENCFF772PJM 214266788 ENCODE Processing Pipeline e0cad4d8b0f171bb2b90952104ce4db5 https://www.encodeproject.org/files/ENCFF526PCX/@@download/ENCFF526PCX.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF893YOF bigWig signal p-value ENCSR000BNE ChIP-seq EFO:0002067 K562 cell line Homo sapiens EGR1-human ENCAB000ASX DNA see document see document False 2011-07-18 ENCODE 2 ENCFF021CMK, ENCFF772PJM 199740159 ENCODE Processing Pipeline 9164cb572cc6350b90a4fa86081601ac https://www.encodeproject.org/files/ENCFF893YOF/@@download/ENCFF893YOF.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF642WHJ bigWig signal p-value ENCSR000BNE ChIP-seq EFO:0002067 K562 cell line Homo sapiens EGR1-human ENCAB000ASX DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF021CMK, ENCFF645IYJ, ENCFF772PJM 185051990 ENCODE Processing Pipeline 690d6c9c2a56bc3eeecdc50a1a3001a7 https://www.encodeproject.org/files/ENCFF642WHJ/@@download/ENCFF642WHJ.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF822TXT bigWig fold change over control ENCSR000BNE ChIP-seq EFO:0002067 K562 cell line Homo sapiens EGR1-human ENCAB000ASX DNA see document see document False 2011-07-18 ENCODE 1 ENCFF645IYJ, ENCFF772PJM 185499721 ENCODE Processing Pipeline e49f4b6676bd99ddb6f953f8124db64f https://www.encodeproject.org/files/ENCFF822TXT/@@download/ENCFF822TXT.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF422BSY bigWig fold change over control ENCSR000BNE ChIP-seq EFO:0002067 K562 cell line Homo sapiens EGR1-human ENCAB000ASX DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF021CMK, ENCFF645IYJ, ENCFF772PJM 485067015 ENCODE Processing Pipeline 2caac4dde7db2d6030d0f8daf13a7665 https://www.encodeproject.org/files/ENCFF422BSY/@@download/ENCFF422BSY.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF178PTI bed narrowPeak peaks ENCSR000BNE ChIP-seq EFO:0002067 K562 cell line Homo sapiens EGR1-human ENCAB000ASX DNA see document see document False 2011-07-18 ENCODE 1 ENCFF645IYJ, ENCFF772PJM 4230594 ENCODE Processing Pipeline e7a24eb01ffe31e6234de92ec1547908 https://www.encodeproject.org/files/ENCFF178PTI/@@download/ENCFF178PTI.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF913QDG bed narrowPeak peaks ENCSR000BNE ChIP-seq EFO:0002067 K562 cell line Homo sapiens EGR1-human ENCAB000ASX DNA see document see document False 2011-07-18 ENCODE 2 ENCFF021CMK, ENCFF772PJM 4401711 ENCODE Processing Pipeline af0a13a9fda72df45edb4fc6dbc385c0 https://www.encodeproject.org/files/ENCFF913QDG/@@download/ENCFF913QDG.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF361DGT bed narrowPeak peaks ENCSR000BNE ChIP-seq EFO:0002067 K562 cell line Homo sapiens EGR1-human ENCAB000ASX DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF021CMK, ENCFF645IYJ, ENCFF772PJM 5111608 ENCODE Processing Pipeline 90b8af4e1e46a9f9acf4903cab5f580d https://www.encodeproject.org/files/ENCFF361DGT/@@download/ENCFF361DGT.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF233SHC bigBed narrowPeak peaks ENCSR000BNE ChIP-seq EFO:0002067 K562 cell line Homo sapiens EGR1-human ENCAB000ASX DNA see document see document False 2011-07-18 ENCODE 1 ENCFF178PTI 9750355 ENCODE Processing Pipeline 9f03650711dfd83eda8f7691ec69afd4 https://www.encodeproject.org/files/ENCFF233SHC/@@download/ENCFF233SHC.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF743KLO bigBed narrowPeak peaks ENCSR000BNE ChIP-seq EFO:0002067 K562 cell line Homo sapiens EGR1-human ENCAB000ASX DNA see document see document False 2011-07-18 ENCODE 2 ENCFF913QDG 10216157 ENCODE Processing Pipeline 733a06c866cda9edf54705777437a112 https://www.encodeproject.org/files/ENCFF743KLO/@@download/ENCFF743KLO.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF359NJA bigBed narrowPeak peaks ENCSR000BNE ChIP-seq EFO:0002067 K562 cell line Homo sapiens EGR1-human ENCAB000ASX DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF361DGT 10785159 ENCODE Processing Pipeline d47c303e381d8fb98cbeff4628ff66b6 https://www.encodeproject.org/files/ENCFF359NJA/@@download/ENCFF359NJA.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF561OGS bed narrowPeak optimal idr thresholded peaks ENCSR000BNE ChIP-seq EFO:0002067 K562 cell line Homo sapiens EGR1-human ENCAB000ASX DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF178PTI, ENCFF361DGT, ENCFF419RSJ, ENCFF913QDG 627927 ENCODE Processing Pipeline b45c5bffe7443eafc8922d733c211f2a https://www.encodeproject.org/files/ENCFF561OGS/@@download/ENCFF561OGS.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF962GIJ bigBed narrowPeak optimal idr thresholded peaks ENCSR000BNE ChIP-seq EFO:0002067 K562 cell line Homo sapiens EGR1-human ENCAB000ASX DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF561OGS 1237621 ENCODE Processing Pipeline f623cdfe6303f5bc51f7ad572e39cf07 https://www.encodeproject.org/files/ENCFF962GIJ/@@download/ENCFF962GIJ.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF270CPX bigWig fold change over control ENCSR000BNE ChIP-seq EFO:0002067 K562 cell line Homo sapiens EGR1-human ENCAB000ASX DNA see document see document False 2011-07-18 ENCODE 2 ENCFF481PJT, ENCFF750MIM 351244524 ENCODE Processing Pipeline 918061bc38923b2b4efcf5848b15a220 https://www.encodeproject.org/files/ENCFF270CPX/@@download/ENCFF270CPX.bigWig hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF067ELR bigWig signal p-value ENCSR000BNE ChIP-seq EFO:0002067 K562 cell line Homo sapiens EGR1-human ENCAB000ASX DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF052PXH, ENCFF481PJT, ENCFF750MIM 186032463 ENCODE Processing Pipeline 49e96cefe6c31b37a07f906496f9075a https://www.encodeproject.org/files/ENCFF067ELR/@@download/ENCFF067ELR.bigWig hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF671MRQ bed narrowPeak peaks ENCSR000BNE ChIP-seq EFO:0002067 K562 cell line Homo sapiens EGR1-human ENCAB000ASX DNA see document see document False 2011-07-18 ENCODE 2 ENCFF481PJT, ENCFF750MIM 4415578 ENCODE Processing Pipeline 923cb3d41bb396499735f3ecefeedf4c https://www.encodeproject.org/files/ENCFF671MRQ/@@download/ENCFF671MRQ.bed.gz hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF354BUW bigBed narrowPeak peaks ENCSR000BNE ChIP-seq EFO:0002067 K562 cell line Homo sapiens EGR1-human ENCAB000ASX DNA see document see document False 2011-07-18 ENCODE 1 ENCFF511ZEU 9753972 ENCODE Processing Pipeline 3accedec20e861a32f27708c13c6f03e https://www.encodeproject.org/files/ENCFF354BUW/@@download/ENCFF354BUW.bigBed hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF602MOA bigWig signal p-value ENCSR000BNE ChIP-seq EFO:0002067 K562 cell line Homo sapiens EGR1-human ENCAB000ASX DNA see document see document False 2011-07-18 ENCODE 2 ENCFF481PJT, ENCFF750MIM 199783797 ENCODE Processing Pipeline 60fa9700f13951d9dd6d0681e7041aaa https://www.encodeproject.org/files/ENCFF602MOA/@@download/ENCFF602MOA.bigWig hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF511ZEU bed narrowPeak peaks ENCSR000BNE ChIP-seq EFO:0002067 K562 cell line Homo sapiens EGR1-human ENCAB000ASX DNA see document see document False 2011-07-18 ENCODE 1 ENCFF052PXH, ENCFF750MIM 4238268 ENCODE Processing Pipeline 3d1d035ab43db38b2cad069a26cc2e8b https://www.encodeproject.org/files/ENCFF511ZEU/@@download/ENCFF511ZEU.bed.gz hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF537QVM bed narrowPeak peaks ENCSR000BNE ChIP-seq EFO:0002067 K562 cell line Homo sapiens EGR1-human ENCAB000ASX DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF052PXH, ENCFF481PJT, ENCFF750MIM 5123503 ENCODE Processing Pipeline ac75bda26ea184e834746f62d5b76ee3 https://www.encodeproject.org/files/ENCFF537QVM/@@download/ENCFF537QVM.bed.gz hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF199RLH bigBed narrowPeak peaks ENCSR000BNE ChIP-seq EFO:0002067 K562 cell line Homo sapiens EGR1-human ENCAB000ASX DNA see document see document False 2011-07-18 ENCODE 2 ENCFF671MRQ 10225025 ENCODE Processing Pipeline 115d1818cddb959da7e5d51e27581bbf https://www.encodeproject.org/files/ENCFF199RLH/@@download/ENCFF199RLH.bigBed hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF650QBX bigBed narrowPeak peaks ENCSR000BNE ChIP-seq EFO:0002067 K562 cell line Homo sapiens EGR1-human ENCAB000ASX DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF537QVM 10794397 ENCODE Processing Pipeline abb0f0d225247a832f08aad6ec377b2a https://www.encodeproject.org/files/ENCFF650QBX/@@download/ENCFF650QBX.bigBed hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF171SJU bigWig signal p-value ENCSR000BNE ChIP-seq EFO:0002067 K562 cell line Homo sapiens EGR1-human ENCAB000ASX DNA see document see document False 2011-07-18 ENCODE 1 ENCFF052PXH, ENCFF750MIM 214437909 ENCODE Processing Pipeline a4d524ca86018bcb5ca3d4bc0c7db233 https://www.encodeproject.org/files/ENCFF171SJU/@@download/ENCFF171SJU.bigWig hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF037SVQ bigBed narrowPeak optimal idr thresholded peaks ENCSR000BNE ChIP-seq EFO:0002067 K562 cell line Homo sapiens EGR1-human ENCAB000ASX DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF182QDI 1240949 ENCODE Processing Pipeline 6ed50a57101afffb2693996e6976f045 https://www.encodeproject.org/files/ENCFF037SVQ/@@download/ENCFF037SVQ.bigBed hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF960YPS bigWig fold change over control ENCSR000BNE ChIP-seq EFO:0002067 K562 cell line Homo sapiens EGR1-human ENCAB000ASX DNA see document see document False 2011-07-18 ENCODE 1 ENCFF052PXH, ENCFF750MIM 184003042 ENCODE Processing Pipeline 97d368627c85b717d021a6ab27e617e5 https://www.encodeproject.org/files/ENCFF960YPS/@@download/ENCFF960YPS.bigWig hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF182QDI bed narrowPeak optimal idr thresholded peaks ENCSR000BNE ChIP-seq EFO:0002067 K562 cell line Homo sapiens EGR1-human ENCAB000ASX DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF001TDO, ENCFF511ZEU, ENCFF537QVM, ENCFF671MRQ 630223 ENCODE Processing Pipeline 32b8aef967771ff7865454fc10cc9ab3 https://www.encodeproject.org/files/ENCFF182QDI/@@download/ENCFF182QDI.bed.gz hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF920HQZ bigWig fold change over control ENCSR000BNE ChIP-seq EFO:0002067 K562 cell line Homo sapiens EGR1-human ENCAB000ASX DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF052PXH, ENCFF481PJT, ENCFF750MIM 484085866 ENCODE Processing Pipeline 217aa7f140a624420652e3e9c469c194 https://www.encodeproject.org/files/ENCFF920HQZ/@@download/ENCFF920HQZ.bigWig hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth ENCFF675KKR bam unfiltered alignments ENCSR093FKD ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CREB3-human ENCAB728YTO DNA False 2016-03-02 ENCODE 2 100 ENCFF274ZEZ, ENCFF565JGI, ENCFF807MUK 3496159759 ENCODE Processing Pipeline ba53220812b4ccc96155da014993c533 https://www.encodeproject.org/files/ENCFF675KKR/@@download/ENCFF675KKR.bam hg19 released low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF381SAQ bam unfiltered alignments ENCSR093FKD ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CREB3-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1 100 ENCFF026WQA, ENCFF199DAD, ENCFF807MUK 4221085414 ENCODE Processing Pipeline 9d3e3b129276aea8340bc3729ba41d36 https://www.encodeproject.org/files/ENCFF381SAQ/@@download/ENCFF381SAQ.bam hg19 released low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF199DAD fastq reads ENCSR093FKD ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CREB3-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1 1 100 paired-ended 1 ENCFF026WQA 1901486531 Michael Snyder, Stanford 211b4c2b45703ed5a457c6d924f7f720 SRA:SRR5111083 https://www.encodeproject.org/files/ENCFF199DAD/@@download/ENCFF199DAD.fastq.gz Illumina HiSeq 2000 /files/ENCFF390XLA/ released low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF026WQA fastq reads ENCSR093FKD ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CREB3-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1 1 100 paired-ended 2 ENCFF199DAD 1996695085 Michael Snyder, Stanford fb93c1c7642e7f6f4bc443077acd881a SRA:SRR5111083 https://www.encodeproject.org/files/ENCFF026WQA/@@download/ENCFF026WQA.fastq.gz Illumina HiSeq 2000 /files/ENCFF783BXZ/ released low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF274ZEZ fastq reads ENCSR093FKD ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CREB3-human ENCAB728YTO DNA False 2016-03-02 ENCODE 2 1 100 paired-ended 1 ENCFF565JGI 1612005871 Michael Snyder, Stanford 74905e113c92f3587fc104848e4d4608 SRA:SRR5111082 https://www.encodeproject.org/files/ENCFF274ZEZ/@@download/ENCFF274ZEZ.fastq.gz Illumina HiSeq 2000 /files/ENCFF390XLA/ released low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF565JGI fastq reads ENCSR093FKD ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CREB3-human ENCAB728YTO DNA False 2016-03-02 ENCODE 2 1 100 paired-ended 2 ENCFF274ZEZ 1674121341 Michael Snyder, Stanford 71ce1095cf4eb6285e262595b1224016 SRA:SRR5111082 https://www.encodeproject.org/files/ENCFF565JGI/@@download/ENCFF565JGI.fastq.gz Illumina HiSeq 2000 /files/ENCFF783BXZ/ released low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF678WSG bam alignments ENCSR093FKD ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CREB3-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1 100 ENCFF026WQA, ENCFF199DAD, ENCFF807MUK 2960969785 ENCODE Processing Pipeline 2c025867a1b3069f6398d8a21e212646 https://www.encodeproject.org/files/ENCFF678WSG/@@download/ENCFF678WSG.bam hg19 released low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF252BPD bam alignments ENCSR093FKD ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CREB3-human ENCAB728YTO DNA False 2016-03-02 ENCODE 2 100 ENCFF274ZEZ, ENCFF565JGI, ENCFF807MUK 2333810785 ENCODE Processing Pipeline f47a96c00d0f28b6977e05109b796b81 https://www.encodeproject.org/files/ENCFF252BPD/@@download/ENCFF252BPD.bam hg19 released low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF874SSJ bigWig signal p-value ENCSR093FKD ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CREB3-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1 ENCFF678WSG, ENCFF847WWC 876325005 ENCODE Processing Pipeline 9cccb228846187a98d844187e05799d1 https://www.encodeproject.org/files/ENCFF874SSJ/@@download/ENCFF874SSJ.bigWig hg19 released low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF728KXF bigWig signal p-value ENCSR093FKD ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CREB3-human ENCAB728YTO DNA False 2016-03-02 ENCODE 2 ENCFF252BPD, ENCFF847WWC 656263191 ENCODE Processing Pipeline 19b7052fdb663baec9e21f6782303cb7 https://www.encodeproject.org/files/ENCFF728KXF/@@download/ENCFF728KXF.bigWig hg19 released low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF736PXD bigWig signal p-value ENCSR093FKD ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CREB3-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF252BPD, ENCFF678WSG, ENCFF847WWC 1122508793 ENCODE Processing Pipeline 7060f2b598a3645d3a91975fade3642d https://www.encodeproject.org/files/ENCFF736PXD/@@download/ENCFF736PXD.bigWig hg19 released low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF372AXO bigWig fold change over control ENCSR093FKD ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CREB3-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1 ENCFF678WSG, ENCFF847WWC 735024345 ENCODE Processing Pipeline c9d6246e8479e57e4522e819a2cae973 https://www.encodeproject.org/files/ENCFF372AXO/@@download/ENCFF372AXO.bigWig hg19 released low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF223HQQ bigWig fold change over control ENCSR093FKD ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CREB3-human ENCAB728YTO DNA False 2016-03-02 ENCODE 2 ENCFF252BPD, ENCFF847WWC 669417465 ENCODE Processing Pipeline 1e097d9eafa5a8c38cd68a434230000b https://www.encodeproject.org/files/ENCFF223HQQ/@@download/ENCFF223HQQ.bigWig hg19 released low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF328JKG bed narrowPeak peaks ENCSR093FKD ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CREB3-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1 ENCFF678WSG, ENCFF847WWC 5957104 ENCODE Processing Pipeline 6e62a8695452b07cd3c97d0583220ac3 https://www.encodeproject.org/files/ENCFF328JKG/@@download/ENCFF328JKG.bed.gz hg19 released low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF313HJO bed narrowPeak peaks ENCSR093FKD ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CREB3-human ENCAB728YTO DNA False 2016-03-02 ENCODE 2 ENCFF252BPD, ENCFF847WWC 6066355 ENCODE Processing Pipeline b487f0b2226a0251fa87c44d3d0f3897 https://www.encodeproject.org/files/ENCFF313HJO/@@download/ENCFF313HJO.bed.gz hg19 released low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF879MML bigWig fold change over control ENCSR093FKD ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CREB3-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF252BPD, ENCFF678WSG, ENCFF847WWC 1107109011 ENCODE Processing Pipeline 60b4467f1b03c6a9bf49adeb9c123793 https://www.encodeproject.org/files/ENCFF879MML/@@download/ENCFF879MML.bigWig hg19 released low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF572YZB bed narrowPeak peaks ENCSR093FKD ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CREB3-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF252BPD, ENCFF678WSG, ENCFF847WWC 6832331 ENCODE Processing Pipeline b91e0ce07796c45372e0303da36a545c https://www.encodeproject.org/files/ENCFF572YZB/@@download/ENCFF572YZB.bed.gz hg19 released low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF872TWC bigBed narrowPeak peaks ENCSR093FKD ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CREB3-human ENCAB728YTO DNA False 2016-03-02 ENCODE 2 ENCFF313HJO 13252854 ENCODE Processing Pipeline d4327953a26242ab50c341776a503336 https://www.encodeproject.org/files/ENCFF872TWC/@@download/ENCFF872TWC.bigBed hg19 released low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF623FNX bigBed narrowPeak peaks ENCSR093FKD ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CREB3-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1 ENCFF328JKG 13303566 ENCODE Processing Pipeline 459f8c030b9ae9185eb1985e6bd91c2b https://www.encodeproject.org/files/ENCFF623FNX/@@download/ENCFF623FNX.bigBed hg19 released low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF257VYN bigBed narrowPeak peaks ENCSR093FKD ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CREB3-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF572YZB 13175648 ENCODE Processing Pipeline 12fd3269f757cf43b207b75d11ae3ca4 https://www.encodeproject.org/files/ENCFF257VYN/@@download/ENCFF257VYN.bigBed hg19 released low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF324FUU bam unfiltered alignments ENCSR093FKD ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CREB3-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1 100 ENCFF026WQA, ENCFF199DAD, ENCFF643CGH 4225714203 ENCODE Processing Pipeline d6998800d21f0998992d08deb62f807b https://www.encodeproject.org/files/ENCFF324FUU/@@download/ENCFF324FUU.bam GRCh38 released low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF907KXX bam unfiltered alignments ENCSR093FKD ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CREB3-human ENCAB728YTO DNA False 2016-03-02 ENCODE 2 100 ENCFF274ZEZ, ENCFF565JGI, ENCFF643CGH 3498899046 ENCODE Processing Pipeline 17e49db20cf8cfe4d7f542d17eaa9ea2 https://www.encodeproject.org/files/ENCFF907KXX/@@download/ENCFF907KXX.bam GRCh38 released low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF294DBF bam alignments ENCSR093FKD ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CREB3-human ENCAB728YTO DNA False 2016-03-02 ENCODE 2 100 ENCFF274ZEZ, ENCFF565JGI, ENCFF643CGH 2334268629 ENCODE Processing Pipeline 6a5e5759c17fa5c66df22f752bdcb77e https://www.encodeproject.org/files/ENCFF294DBF/@@download/ENCFF294DBF.bam GRCh38 released low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF334OKF bam alignments ENCSR093FKD ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CREB3-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1 100 ENCFF026WQA, ENCFF199DAD, ENCFF643CGH 2961520443 ENCODE Processing Pipeline 9dccde4aaab5586ad2109c3f23ba28d2 https://www.encodeproject.org/files/ENCFF334OKF/@@download/ENCFF334OKF.bam GRCh38 released low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF386CVM bigWig signal p-value ENCSR093FKD ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CREB3-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1 ENCFF209VFR, ENCFF334OKF 729537420 ENCODE Processing Pipeline 6655958f23414db084196912ab847b89 https://www.encodeproject.org/files/ENCFF386CVM/@@download/ENCFF386CVM.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF291PXD bigWig signal p-value ENCSR093FKD ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CREB3-human ENCAB728YTO DNA False 2016-03-02 ENCODE 2 ENCFF209VFR, ENCFF294DBF 690521654 ENCODE Processing Pipeline e2dfc894ef3cc582dc0a845e39316c93 https://www.encodeproject.org/files/ENCFF291PXD/@@download/ENCFF291PXD.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF257DGE bigWig signal p-value ENCSR093FKD ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CREB3-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF209VFR, ENCFF294DBF, ENCFF334OKF 1124316553 ENCODE Processing Pipeline 137ab6aa013c16941eaf063a30aa91dc https://www.encodeproject.org/files/ENCFF257DGE/@@download/ENCFF257DGE.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF766RVF bigWig fold change over control ENCSR093FKD ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CREB3-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1 ENCFF209VFR, ENCFF334OKF 741021712 ENCODE Processing Pipeline 9df3e5d8be9fab12e53d7fb3e5f69ff2 https://www.encodeproject.org/files/ENCFF766RVF/@@download/ENCFF766RVF.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF731JFV bigWig fold change over control ENCSR093FKD ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CREB3-human ENCAB728YTO DNA False 2016-03-02 ENCODE 2 ENCFF209VFR, ENCFF294DBF 681449205 ENCODE Processing Pipeline bfa0616d17fc43162e7cfb6c422b8d13 https://www.encodeproject.org/files/ENCFF731JFV/@@download/ENCFF731JFV.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF543DHU bigWig fold change over control ENCSR093FKD ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CREB3-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF209VFR, ENCFF294DBF, ENCFF334OKF 1110085527 ENCODE Processing Pipeline 69f3ba2cc6f7be8f218b64f764a0b22c https://www.encodeproject.org/files/ENCFF543DHU/@@download/ENCFF543DHU.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF476ZIX bed narrowPeak peaks ENCSR093FKD ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CREB3-human ENCAB728YTO DNA False 2016-03-02 ENCODE 2 ENCFF209VFR, ENCFF294DBF 5883211 ENCODE Processing Pipeline 556c9fe28f60cfafcaf6a2934f3f2214 https://www.encodeproject.org/files/ENCFF476ZIX/@@download/ENCFF476ZIX.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF959FRJ bigBed narrowPeak peaks ENCSR093FKD ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CREB3-human ENCAB728YTO DNA False 2016-03-02 ENCODE 2 ENCFF476ZIX 13237683 ENCODE Processing Pipeline a899622d4e6d8c42dc2656a316fa95a2 https://www.encodeproject.org/files/ENCFF959FRJ/@@download/ENCFF959FRJ.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF861ZJS bigBed narrowPeak peaks ENCSR093FKD ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CREB3-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF701RAG 13190249 ENCODE Processing Pipeline 0270c1a6898951c4e3c6ac223776b434 https://www.encodeproject.org/files/ENCFF861ZJS/@@download/ENCFF861ZJS.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF573MKN bed narrowPeak peaks ENCSR093FKD ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CREB3-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1 ENCFF209VFR, ENCFF334OKF 5825591 ENCODE Processing Pipeline 62ef11a776d3ce2b61131cec29d8b8c8 https://www.encodeproject.org/files/ENCFF573MKN/@@download/ENCFF573MKN.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF701RAG bed narrowPeak peaks ENCSR093FKD ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CREB3-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF209VFR, ENCFF294DBF, ENCFF334OKF 6726452 ENCODE Processing Pipeline e75f061f4ef3bea7ab864fe840f8b560 https://www.encodeproject.org/files/ENCFF701RAG/@@download/ENCFF701RAG.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF365CIQ bigBed narrowPeak peaks ENCSR093FKD ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CREB3-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1 ENCFF573MKN 13297654 ENCODE Processing Pipeline c3c8cc6604b0d22ec83b3e05a12c37ed https://www.encodeproject.org/files/ENCFF365CIQ/@@download/ENCFF365CIQ.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF027GDP bed narrowPeak conservative idr thresholded peaks ENCSR093FKD ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CREB3-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF419RSJ, ENCFF476ZIX, ENCFF573MKN, ENCFF701RAG 192313 ENCODE Processing Pipeline 688bc3aff832e80b446a12a5a10f6fb2 https://www.encodeproject.org/files/ENCFF027GDP/@@download/ENCFF027GDP.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF606EUI bed narrowPeak optimal idr thresholded peaks ENCSR093FKD ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CREB3-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF419RSJ, ENCFF476ZIX, ENCFF573MKN, ENCFF701RAG 274057 ENCODE Processing Pipeline 6995dcc0acd4f25451c7ad5ca83be19e https://www.encodeproject.org/files/ENCFF606EUI/@@download/ENCFF606EUI.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF587YVD bigBed narrowPeak conservative idr thresholded peaks ENCSR093FKD ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CREB3-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF027GDP 440048 ENCODE Processing Pipeline d8af82301a410e948b566d1dcb557e6e https://www.encodeproject.org/files/ENCFF587YVD/@@download/ENCFF587YVD.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF329BDJ bigBed narrowPeak optimal idr thresholded peaks ENCSR093FKD ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CREB3-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF606EUI 573846 ENCODE Processing Pipeline bd4c6308a686229b8b0e43b73e143d96 https://www.encodeproject.org/files/ENCFF329BDJ/@@download/ENCFF329BDJ.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF726XKT bigBed narrowPeak optimal idr thresholded peaks ENCSR093FKD ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CREB3-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF665FHC 400697 ENCODE Processing Pipeline a582b01b41429c3cbf247229c87cada2 https://www.encodeproject.org/files/ENCFF726XKT/@@download/ENCFF726XKT.bigBed hg19 released low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF459GME bed narrowPeak conservative idr thresholded peaks ENCSR093FKD ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CREB3-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF001TDO, ENCFF313HJO, ENCFF328JKG, ENCFF572YZB 156638 ENCODE Processing Pipeline ece1d1bd0ea684a057482ba82dad6e56 https://www.encodeproject.org/files/ENCFF459GME/@@download/ENCFF459GME.bed.gz hg19 released low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF072NSN bigBed narrowPeak conservative idr thresholded peaks ENCSR093FKD ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CREB3-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF459GME 321550 ENCODE Processing Pipeline 5f3817f8a261558ed60ea2b34acbcf5a https://www.encodeproject.org/files/ENCFF072NSN/@@download/ENCFF072NSN.bigBed hg19 released low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF665FHC bed narrowPeak optimal idr thresholded peaks ENCSR093FKD ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CREB3-human ENCAB728YTO DNA False 2016-03-02 ENCODE 1, 2 ENCFF001TDO, ENCFF313HJO, ENCFF328JKG, ENCFF572YZB 215831 ENCODE Processing Pipeline 13b3ccebe630aa070e48ffa45ad69399 https://www.encodeproject.org/files/ENCFF665FHC/@@download/ENCFF665FHC.bed.gz hg19 released low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF476SSR bam unfiltered alignments ENCSR302AWT ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOXK2-human ENCAB078NIW DNA False 2016-06-14 ENCODE 2 100 ENCFF383GMF, ENCFF441GEH, ENCFF807MUK 4438655750 ENCODE Processing Pipeline 38707f6cb2f79a7f504a024430a0a942 https://www.encodeproject.org/files/ENCFF476SSR/@@download/ENCFF476SSR.bam hg19 released low read depth missing control alignments ENCFF496RYT bam unfiltered alignments ENCSR302AWT ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOXK2-human ENCAB078NIW DNA False 2016-06-14 ENCODE 1 100 ENCFF097VAH, ENCFF795LQA, ENCFF807MUK 3570569051 ENCODE Processing Pipeline 95d9028112504d233375b961d71f2fc7 https://www.encodeproject.org/files/ENCFF496RYT/@@download/ENCFF496RYT.bam hg19 released low read depth missing control alignments ENCFF795LQA fastq reads ENCSR302AWT ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOXK2-human ENCAB078NIW DNA False 2016-06-14 ENCODE 1 1 100 paired-ended 2 ENCFF097VAH 1601634914 Michael Snyder, Stanford 7f81e4271bd8adbf985dba5af3ddedcc SRA:SRR5111404 https://www.encodeproject.org/files/ENCFF795LQA/@@download/ENCFF795LQA.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFH/ released low read depth missing control alignments ENCFF097VAH fastq reads ENCSR302AWT ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOXK2-human ENCAB078NIW DNA False 2016-06-14 ENCODE 1 1 100 paired-ended 1 ENCFF795LQA 1603221421 Michael Snyder, Stanford 3fea425fad2176632a9bbb1d1cd36b77 SRA:SRR5111404 https://www.encodeproject.org/files/ENCFF097VAH/@@download/ENCFF097VAH.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFF/ released low read depth missing control alignments ENCFF383GMF fastq reads ENCSR302AWT ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOXK2-human ENCAB078NIW DNA False 2016-06-14 ENCODE 2 1 100 paired-ended 1 ENCFF441GEH 1982535214 Michael Snyder, Stanford e4c42d10cd05a03ac70f247189a41c8d SRA:SRR5111405 https://www.encodeproject.org/files/ENCFF383GMF/@@download/ENCFF383GMF.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFD/ released low read depth missing control alignments ENCFF441GEH fastq reads ENCSR302AWT ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOXK2-human ENCAB078NIW DNA False 2016-06-14 ENCODE 2 1 100 paired-ended 2 ENCFF383GMF 2055954680 Michael Snyder, Stanford cb95c3992bd23be4a15bebbedc6aa93a SRA:SRR5111405 https://www.encodeproject.org/files/ENCFF441GEH/@@download/ENCFF441GEH.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFA/ released low read depth missing control alignments ENCFF073XZO bam alignments ENCSR302AWT ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOXK2-human ENCAB078NIW DNA False 2016-06-14 ENCODE 2 100 ENCFF383GMF, ENCFF441GEH, ENCFF807MUK 3831769480 ENCODE Processing Pipeline b6999d7a7f1325c15799c19ed8f534a5 https://www.encodeproject.org/files/ENCFF073XZO/@@download/ENCFF073XZO.bam hg19 released low read depth missing control alignments ENCFF135OYM bam alignments ENCSR302AWT ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOXK2-human ENCAB078NIW DNA False 2016-06-14 ENCODE 1 100 ENCFF097VAH, ENCFF795LQA, ENCFF807MUK 3006991865 ENCODE Processing Pipeline 07c6a4530d68b7c42e369b8ee32a46a1 https://www.encodeproject.org/files/ENCFF135OYM/@@download/ENCFF135OYM.bam hg19 released low read depth missing control alignments ENCFF543HMP bigWig signal p-value ENCSR302AWT ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOXK2-human ENCAB078NIW DNA False 2016-06-14 ENCODE 1 ENCFF135OYM, ENCFF581ZJL 1071679234 ENCODE Processing Pipeline 9bf5efda59603d5b0425d3b07118202c https://www.encodeproject.org/files/ENCFF543HMP/@@download/ENCFF543HMP.bigWig hg19 released low read depth missing control alignments ENCFF601NQQ bigWig signal p-value ENCSR302AWT ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOXK2-human ENCAB078NIW DNA False 2016-06-14 ENCODE 2 ENCFF051LWI, ENCFF073XZO 979502758 ENCODE Processing Pipeline ac59a7ac7e16d7abec14f9692575cd54 https://www.encodeproject.org/files/ENCFF601NQQ/@@download/ENCFF601NQQ.bigWig hg19 released low read depth missing control alignments ENCFF298WCQ bigWig fold change over control ENCSR302AWT ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOXK2-human ENCAB078NIW DNA False 2016-06-14 ENCODE 1 ENCFF135OYM, ENCFF581ZJL 964659501 ENCODE Processing Pipeline 7f81d78ee370036055782c57d5a41b3e https://www.encodeproject.org/files/ENCFF298WCQ/@@download/ENCFF298WCQ.bigWig hg19 released low read depth missing control alignments ENCFF568MDW bigWig signal p-value ENCSR302AWT ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOXK2-human ENCAB078NIW DNA False 2016-06-14 ENCODE 1, 2 ENCFF051LWI, ENCFF073XZO, ENCFF135OYM, ENCFF581ZJL 1614255786 ENCODE Processing Pipeline c2594c7216a80f3b9d053e1e78d22544 https://www.encodeproject.org/files/ENCFF568MDW/@@download/ENCFF568MDW.bigWig hg19 released low read depth missing control alignments ENCFF745QWA bigWig fold change over control ENCSR302AWT ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOXK2-human ENCAB078NIW DNA False 2016-06-14 ENCODE 2 ENCFF051LWI, ENCFF073XZO 1068856226 ENCODE Processing Pipeline 7598b50a335cbeded3ffaa7239e90be6 https://www.encodeproject.org/files/ENCFF745QWA/@@download/ENCFF745QWA.bigWig hg19 released low read depth missing control alignments ENCFF852WRN bigWig fold change over control ENCSR302AWT ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOXK2-human ENCAB078NIW DNA False 2016-06-14 ENCODE 1, 2 ENCFF051LWI, ENCFF073XZO, ENCFF135OYM, ENCFF581ZJL 1908245620 ENCODE Processing Pipeline 625fa8075f47bfc90bbd8648ca203ed7 https://www.encodeproject.org/files/ENCFF852WRN/@@download/ENCFF852WRN.bigWig hg19 released low read depth missing control alignments ENCFF203SUN bed narrowPeak peaks ENCSR302AWT ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOXK2-human ENCAB078NIW DNA False 2016-06-14 ENCODE 2 ENCFF051LWI, ENCFF073XZO 6769212 ENCODE Processing Pipeline 23d5725b84132909e80e5661417b18a3 https://www.encodeproject.org/files/ENCFF203SUN/@@download/ENCFF203SUN.bed.gz hg19 released low read depth missing control alignments ENCFF037YFB bed narrowPeak peaks ENCSR302AWT ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOXK2-human ENCAB078NIW DNA False 2016-06-14 ENCODE 1 ENCFF135OYM, ENCFF581ZJL 6453786 ENCODE Processing Pipeline 8f2d9cef390dd17b72020147d0bd37c5 https://www.encodeproject.org/files/ENCFF037YFB/@@download/ENCFF037YFB.bed.gz hg19 released low read depth missing control alignments ENCFF732HYH bed narrowPeak peaks ENCSR302AWT ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOXK2-human ENCAB078NIW DNA False 2016-06-14 ENCODE 1, 2 ENCFF051LWI, ENCFF073XZO, ENCFF135OYM, ENCFF581ZJL 7124871 ENCODE Processing Pipeline 3ef725c04659439dcfb40c8b0e4b2113 https://www.encodeproject.org/files/ENCFF732HYH/@@download/ENCFF732HYH.bed.gz hg19 released low read depth missing control alignments ENCFF931VRM bigBed narrowPeak peaks ENCSR302AWT ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOXK2-human ENCAB078NIW DNA False 2016-06-14 ENCODE 1, 2 ENCFF732HYH 13084716 ENCODE Processing Pipeline 22308960436b9deb7d6bc60c8afdf3ea https://www.encodeproject.org/files/ENCFF931VRM/@@download/ENCFF931VRM.bigBed hg19 released low read depth missing control alignments ENCFF538PNG bigBed narrowPeak peaks ENCSR302AWT ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOXK2-human ENCAB078NIW DNA False 2016-06-14 ENCODE 2 ENCFF203SUN 13279688 ENCODE Processing Pipeline 290faa7e20261910828351562c96115d https://www.encodeproject.org/files/ENCFF538PNG/@@download/ENCFF538PNG.bigBed hg19 released low read depth missing control alignments ENCFF825HMZ bigBed narrowPeak peaks ENCSR302AWT ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOXK2-human ENCAB078NIW DNA False 2016-06-14 ENCODE 1 ENCFF037YFB 13361371 ENCODE Processing Pipeline 20e8443421cb1ab51492eb6cb99d0e4c https://www.encodeproject.org/files/ENCFF825HMZ/@@download/ENCFF825HMZ.bigBed hg19 released low read depth missing control alignments ENCFF919HNS bam unfiltered alignments ENCSR302AWT ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOXK2-human ENCAB078NIW DNA False 2016-06-14 ENCODE 1 100 ENCFF097VAH, ENCFF643CGH, ENCFF795LQA 3574337465 ENCODE Processing Pipeline d7b6407be161f8cc1860ee898260a758 https://www.encodeproject.org/files/ENCFF919HNS/@@download/ENCFF919HNS.bam GRCh38 released low read depth missing control alignments ENCFF172BUN bam unfiltered alignments ENCSR302AWT ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOXK2-human ENCAB078NIW DNA False 2016-06-14 ENCODE 2 100 ENCFF383GMF, ENCFF441GEH, ENCFF643CGH 4443513322 ENCODE Processing Pipeline 5fc95c4ac3fd83bc62c1c9da93f69ca8 https://www.encodeproject.org/files/ENCFF172BUN/@@download/ENCFF172BUN.bam GRCh38 released low read depth missing control alignments ENCFF703CKR bam alignments ENCSR302AWT ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOXK2-human ENCAB078NIW DNA False 2016-06-14 ENCODE 1 100 ENCFF097VAH, ENCFF643CGH, ENCFF795LQA 3008581364 ENCODE Processing Pipeline 434023a8f536d7feed790a4c221b3679 https://www.encodeproject.org/files/ENCFF703CKR/@@download/ENCFF703CKR.bam GRCh38 released low read depth missing control alignments ENCFF931HHQ bam alignments ENCSR302AWT ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOXK2-human ENCAB078NIW DNA False 2016-06-14 ENCODE 2 100 ENCFF383GMF, ENCFF441GEH, ENCFF643CGH 3834523294 ENCODE Processing Pipeline 559953405d7c051abc3cce0d2effb650 https://www.encodeproject.org/files/ENCFF931HHQ/@@download/ENCFF931HHQ.bam GRCh38 released low read depth missing control alignments ENCFF094CBK bigWig signal p-value ENCSR302AWT ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOXK2-human ENCAB078NIW DNA False 2016-06-14 ENCODE 1 ENCFF703CKR 1047515139 ENCODE Processing Pipeline 7eeca1f80d0936b41e46ba0eb915dc3b https://www.encodeproject.org/files/ENCFF094CBK/@@download/ENCFF094CBK.bigWig GRCh38 released low read depth missing control alignments ENCFF175DQJ bigWig signal p-value ENCSR302AWT ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOXK2-human ENCAB078NIW DNA False 2016-06-14 ENCODE 2 ENCFF931HHQ 1002065215 ENCODE Processing Pipeline ba678450f674dc48c9e22a366870f303 https://www.encodeproject.org/files/ENCFF175DQJ/@@download/ENCFF175DQJ.bigWig GRCh38 released low read depth missing control alignments ENCFF052XNM bigWig signal p-value ENCSR302AWT ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOXK2-human ENCAB078NIW DNA False 2016-06-14 ENCODE 1, 2 ENCFF703CKR, ENCFF931HHQ 1675809848 ENCODE Processing Pipeline 9fcf1e2738d5e5085ce82dba5eba2350 https://www.encodeproject.org/files/ENCFF052XNM/@@download/ENCFF052XNM.bigWig GRCh38 released low read depth missing control alignments ENCFF403LBT bigWig fold change over control ENCSR302AWT ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOXK2-human ENCAB078NIW DNA False 2016-06-14 ENCODE 1 ENCFF703CKR 964082251 ENCODE Processing Pipeline f0419a817fe46ab735125d5813c966c0 https://www.encodeproject.org/files/ENCFF403LBT/@@download/ENCFF403LBT.bigWig GRCh38 released low read depth missing control alignments ENCFF555QQD bigWig fold change over control ENCSR302AWT ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOXK2-human ENCAB078NIW DNA False 2016-06-14 ENCODE 2 ENCFF931HHQ 1069281258 ENCODE Processing Pipeline ae5b4e3e7d21046887b7f4f4de4865a0 https://www.encodeproject.org/files/ENCFF555QQD/@@download/ENCFF555QQD.bigWig GRCh38 released low read depth missing control alignments ENCFF648RXN bigWig fold change over control ENCSR302AWT ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOXK2-human ENCAB078NIW DNA False 2016-06-14 ENCODE 1, 2 ENCFF703CKR, ENCFF931HHQ 1952750606 ENCODE Processing Pipeline a2ac3b285a41fa8666c76a111b260b56 https://www.encodeproject.org/files/ENCFF648RXN/@@download/ENCFF648RXN.bigWig GRCh38 released low read depth missing control alignments ENCFF491ELB bed narrowPeak peaks ENCSR302AWT ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOXK2-human ENCAB078NIW DNA False 2016-06-14 ENCODE 2 ENCFF931HHQ 6648837 ENCODE Processing Pipeline c91f4f0afc2a3634203ae9858c4fa288 https://www.encodeproject.org/files/ENCFF491ELB/@@download/ENCFF491ELB.bed.gz GRCh38 released low read depth missing control alignments ENCFF754RKE bed narrowPeak peaks ENCSR302AWT ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOXK2-human ENCAB078NIW DNA False 2016-06-14 ENCODE 1, 2 ENCFF703CKR, ENCFF931HHQ 7175534 ENCODE Processing Pipeline 5542a6f954d9927d2385f3c1c24f60dd https://www.encodeproject.org/files/ENCFF754RKE/@@download/ENCFF754RKE.bed.gz GRCh38 released low read depth missing control alignments ENCFF373LNE bigBed narrowPeak peaks ENCSR302AWT ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOXK2-human ENCAB078NIW DNA False 2016-06-14 ENCODE 2 ENCFF491ELB 13270367 ENCODE Processing Pipeline 73cde894cf93b2bd76f335d898b278b3 https://www.encodeproject.org/files/ENCFF373LNE/@@download/ENCFF373LNE.bigBed GRCh38 released low read depth missing control alignments ENCFF817NFR bigBed narrowPeak peaks ENCSR302AWT ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOXK2-human ENCAB078NIW DNA False 2016-06-14 ENCODE 1, 2 ENCFF754RKE 13183228 ENCODE Processing Pipeline 2106335b9764ac4e19af478da9aeb859 https://www.encodeproject.org/files/ENCFF817NFR/@@download/ENCFF817NFR.bigBed GRCh38 released low read depth missing control alignments ENCFF066CWG bed narrowPeak optimal idr thresholded peaks ENCSR302AWT ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOXK2-human ENCAB078NIW DNA False 2016-06-14 ENCODE 1, 2 ENCFF419RSJ, ENCFF491ELB, ENCFF621LTB, ENCFF754RKE 416652 ENCODE Processing Pipeline e5b124183cfc87b447bf46aeec688b49 https://www.encodeproject.org/files/ENCFF066CWG/@@download/ENCFF066CWG.bed.gz GRCh38 released low read depth missing control alignments ENCFF621LTB bed narrowPeak peaks ENCSR302AWT ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOXK2-human ENCAB078NIW DNA False 2016-06-14 ENCODE 1 ENCFF703CKR 6311330 ENCODE Processing Pipeline 9c0e0fa9325b5b66f6777ec47fa2ce38 https://www.encodeproject.org/files/ENCFF621LTB/@@download/ENCFF621LTB.bed.gz GRCh38 released low read depth missing control alignments ENCFF802WID bigBed narrowPeak peaks ENCSR302AWT ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOXK2-human ENCAB078NIW DNA False 2016-06-14 ENCODE 1 ENCFF621LTB 13340145 ENCODE Processing Pipeline 33778ca103267785851b1a9b31e00af0 https://www.encodeproject.org/files/ENCFF802WID/@@download/ENCFF802WID.bigBed GRCh38 released low read depth missing control alignments ENCFF154SRU bed narrowPeak conservative idr thresholded peaks ENCSR302AWT ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOXK2-human ENCAB078NIW DNA False 2016-06-14 ENCODE 1, 2 ENCFF419RSJ, ENCFF491ELB, ENCFF621LTB, ENCFF754RKE 329078 ENCODE Processing Pipeline da971323006e67aad36b282e569f788b https://www.encodeproject.org/files/ENCFF154SRU/@@download/ENCFF154SRU.bed.gz GRCh38 released low read depth missing control alignments ENCFF406NUR bigBed narrowPeak conservative idr thresholded peaks ENCSR302AWT ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOXK2-human ENCAB078NIW DNA False 2016-06-14 ENCODE 1, 2 ENCFF154SRU 726865 ENCODE Processing Pipeline 842c93261f65c821df478f0b72709e32 https://www.encodeproject.org/files/ENCFF406NUR/@@download/ENCFF406NUR.bigBed GRCh38 released low read depth missing control alignments ENCFF039LQD bigBed narrowPeak optimal idr thresholded peaks ENCSR302AWT ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOXK2-human ENCAB078NIW DNA False 2016-06-14 ENCODE 1, 2 ENCFF066CWG 864411 ENCODE Processing Pipeline 70bc466febb75460985ea2305c8e24fd https://www.encodeproject.org/files/ENCFF039LQD/@@download/ENCFF039LQD.bigBed GRCh38 released low read depth missing control alignments ENCFF548MLJ bigBed narrowPeak conservative idr thresholded peaks ENCSR302AWT ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOXK2-human ENCAB078NIW DNA False 2016-06-14 ENCODE 1, 2 ENCFF540IYS 521251 ENCODE Processing Pipeline c5948002d721eaefc35fe93d0c0fb289 https://www.encodeproject.org/files/ENCFF548MLJ/@@download/ENCFF548MLJ.bigBed hg19 released low read depth missing control alignments ENCFF540IYS bed narrowPeak conservative idr thresholded peaks ENCSR302AWT ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOXK2-human ENCAB078NIW DNA False 2016-06-14 ENCODE 1, 2 ENCFF001TDO, ENCFF037YFB, ENCFF203SUN, ENCFF732HYH 280128 ENCODE Processing Pipeline bbcf86dc31f22b419bcd6680ed3fb772 https://www.encodeproject.org/files/ENCFF540IYS/@@download/ENCFF540IYS.bed.gz hg19 released low read depth missing control alignments ENCFF248VHN bed narrowPeak optimal idr thresholded peaks ENCSR302AWT ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOXK2-human ENCAB078NIW DNA False 2016-06-14 ENCODE 1, 2 ENCFF001TDO, ENCFF037YFB, ENCFF203SUN, ENCFF732HYH 358492 ENCODE Processing Pipeline 6617b946d9b9a9e353cf71f681323126 https://www.encodeproject.org/files/ENCFF248VHN/@@download/ENCFF248VHN.bed.gz hg19 released low read depth missing control alignments ENCFF259WQJ bigBed narrowPeak optimal idr thresholded peaks ENCSR302AWT ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOXK2-human ENCAB078NIW DNA False 2016-06-14 ENCODE 1, 2 ENCFF248VHN 620191 ENCODE Processing Pipeline 4a4cfd3399a2846df65a4ff4234579b4 https://www.encodeproject.org/files/ENCFF259WQJ/@@download/ENCFF259WQJ.bigBed hg19 released low read depth missing control alignments ENCFF665CXV fastq reads ENCSR948QLZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX1-human ENCAB000BPO DNA False 2016-02-05 ENCODE 1 1 50 single-ended 1584223225 Richard Myers, HAIB ee34101b64221922c7123b4cbeb8d589 SRA:SRR5339580 https://www.encodeproject.org/files/ENCFF665CXV/@@download/ENCFF665CXV.fastq.gz Illumina HiSeq 2000 /files/ENCFF400XMH/ released low read depth, antibody characterized with exemption ENCFF946BAN fastq reads ENCSR948QLZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX1-human ENCAB000BPO DNA False 2016-02-05 ENCODE 2 1 50 single-ended 1255278551 Richard Myers, HAIB ddbdf8e5a1fa0578843fe8be2b0e7da2 https://www.encodeproject.org/files/ENCFF946BAN/@@download/ENCFF946BAN.fastq.gz Illumina HiSeq 2000 /files/ENCFF001RVO/ released low read depth, antibody characterized with exemption ENCFF713QBG bam alignments ENCSR948QLZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX1-human ENCAB000BPO DNA False 2016-02-05 ENCODE 1 ENCFF665CXV, ENCFF807MUK 1222977489 ENCODE Processing Pipeline 1ed304cc9bb022d8da175d84b3c11410 https://www.encodeproject.org/files/ENCFF713QBG/@@download/ENCFF713QBG.bam hg19 released low read depth, antibody characterized with exemption ENCFF493UYW bam alignments ENCSR948QLZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX1-human ENCAB000BPO DNA False 2016-02-05 ENCODE 2 ENCFF807MUK, ENCFF946BAN 932941826 ENCODE Processing Pipeline 4f0f23e754489417db9b990291d358eb https://www.encodeproject.org/files/ENCFF493UYW/@@download/ENCFF493UYW.bam hg19 released low read depth, antibody characterized with exemption ENCFF758UNJ bam unfiltered alignments ENCSR948QLZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX1-human ENCAB000BPO DNA False 2016-02-05 ENCODE 1 50 ENCFF643CGH, ENCFF665CXV 1718635019 ENCODE Processing Pipeline c8df0d9856868c9051c089cc23b30924 https://www.encodeproject.org/files/ENCFF758UNJ/@@download/ENCFF758UNJ.bam GRCh38 released low read depth, antibody characterized with exemption ENCFF971UIQ bam unfiltered alignments ENCSR948QLZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX1-human ENCAB000BPO DNA False 2016-02-05 ENCODE 2 50 ENCFF643CGH, ENCFF946BAN 1342725116 ENCODE Processing Pipeline bf99720421bf0e777eff6a22bb2613db https://www.encodeproject.org/files/ENCFF971UIQ/@@download/ENCFF971UIQ.bam GRCh38 released low read depth, antibody characterized with exemption ENCFF382DBE bam alignments ENCSR948QLZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX1-human ENCAB000BPO DNA False 2016-02-05 ENCODE 1 50 ENCFF643CGH, ENCFF665CXV 1223177321 ENCODE Processing Pipeline cbf1ebb9f3d4fc6cea3e4fa3c4f67aff https://www.encodeproject.org/files/ENCFF382DBE/@@download/ENCFF382DBE.bam GRCh38 released low read depth, antibody characterized with exemption ENCFF888AOR bam alignments ENCSR948QLZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX1-human ENCAB000BPO DNA False 2016-02-05 ENCODE 2 50 ENCFF643CGH, ENCFF946BAN 932564663 ENCODE Processing Pipeline c29b68ac34e0bd63f2ea4d09174c1f33 https://www.encodeproject.org/files/ENCFF888AOR/@@download/ENCFF888AOR.bam GRCh38 released low read depth, antibody characterized with exemption ENCFF701SKJ bigWig signal p-value ENCSR948QLZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX1-human ENCAB000BPO DNA False 2016-02-05 ENCODE 1 ENCFF063BAN, ENCFF382DBE 833642095 ENCODE Processing Pipeline 4d3994ec37589ed32815e7b35d4d3f59 https://www.encodeproject.org/files/ENCFF701SKJ/@@download/ENCFF701SKJ.bigWig GRCh38 released low read depth, antibody characterized with exemption ENCFF113NMU bigWig signal p-value ENCSR948QLZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX1-human ENCAB000BPO DNA False 2016-02-05 ENCODE 2 ENCFF332SVJ, ENCFF888AOR 634541586 ENCODE Processing Pipeline d3ba39bf02686ff6194efd171a4f9369 https://www.encodeproject.org/files/ENCFF113NMU/@@download/ENCFF113NMU.bigWig GRCh38 released low read depth, antibody characterized with exemption ENCFF401SID bigWig fold change over control ENCSR948QLZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX1-human ENCAB000BPO DNA False 2016-02-05 ENCODE 1 ENCFF063BAN, ENCFF382DBE 535867688 ENCODE Processing Pipeline c729b4a88ae986a963a08ace9513a53c https://www.encodeproject.org/files/ENCFF401SID/@@download/ENCFF401SID.bigWig GRCh38 released low read depth, antibody characterized with exemption ENCFF692LXI bigWig signal p-value ENCSR948QLZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX1-human ENCAB000BPO DNA False 2016-02-05 ENCODE 1, 2 ENCFF063BAN, ENCFF332SVJ, ENCFF382DBE, ENCFF888AOR 1215164739 ENCODE Processing Pipeline 15cc0699b789e312ed9677311bc9ed52 https://www.encodeproject.org/files/ENCFF692LXI/@@download/ENCFF692LXI.bigWig GRCh38 released low read depth, antibody characterized with exemption ENCFF865QNO bigWig fold change over control ENCSR948QLZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX1-human ENCAB000BPO DNA False 2016-02-05 ENCODE 2 ENCFF332SVJ, ENCFF888AOR 488537011 ENCODE Processing Pipeline 90d58287da5a133c0cce95debbf3cdcb https://www.encodeproject.org/files/ENCFF865QNO/@@download/ENCFF865QNO.bigWig GRCh38 released low read depth, antibody characterized with exemption ENCFF058NFI bigWig fold change over control ENCSR948QLZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX1-human ENCAB000BPO DNA False 2016-02-05 ENCODE 1, 2 ENCFF063BAN, ENCFF332SVJ, ENCFF382DBE, ENCFF888AOR 1099201356 ENCODE Processing Pipeline 68fe864c22aaa4f0838f3a328fa0a4df https://www.encodeproject.org/files/ENCFF058NFI/@@download/ENCFF058NFI.bigWig GRCh38 released low read depth, antibody characterized with exemption ENCFF990SRA bed narrowPeak peaks ENCSR948QLZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX1-human ENCAB000BPO DNA False 2016-02-05 ENCODE 2 ENCFF332SVJ, ENCFF888AOR 6419371 ENCODE Processing Pipeline 0ee4136d06a2513eae8bbc68898ee1cd https://www.encodeproject.org/files/ENCFF990SRA/@@download/ENCFF990SRA.bed.gz GRCh38 released low read depth, antibody characterized with exemption ENCFF670HFC bed narrowPeak peaks ENCSR948QLZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX1-human ENCAB000BPO DNA False 2016-02-05 ENCODE 1, 2 ENCFF063BAN, ENCFF332SVJ, ENCFF382DBE, ENCFF888AOR 7098085 ENCODE Processing Pipeline ec9952c78441f3ac198de9908e8b0d8c https://www.encodeproject.org/files/ENCFF670HFC/@@download/ENCFF670HFC.bed.gz GRCh38 released low read depth, antibody characterized with exemption ENCFF698PDD bigBed narrowPeak peaks ENCSR948QLZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX1-human ENCAB000BPO DNA False 2016-02-05 ENCODE 2 ENCFF990SRA 13060481 ENCODE Processing Pipeline ed0cddf2b95bd8393dff9ebde12512a3 https://www.encodeproject.org/files/ENCFF698PDD/@@download/ENCFF698PDD.bigBed GRCh38 released low read depth, antibody characterized with exemption ENCFF881HOX bigBed narrowPeak peaks ENCSR948QLZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX1-human ENCAB000BPO DNA False 2016-02-05 ENCODE 1, 2 ENCFF670HFC 13263987 ENCODE Processing Pipeline 5e024042e6b34c99d4b2815deaf65b93 https://www.encodeproject.org/files/ENCFF881HOX/@@download/ENCFF881HOX.bigBed GRCh38 released low read depth, antibody characterized with exemption ENCFF046QEQ bed narrowPeak peaks ENCSR948QLZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX1-human ENCAB000BPO DNA False 2016-02-05 ENCODE 1 ENCFF063BAN, ENCFF382DBE 6126018 ENCODE Processing Pipeline 544d72f381ce8441b5d3b265945b2c96 https://www.encodeproject.org/files/ENCFF046QEQ/@@download/ENCFF046QEQ.bed.gz GRCh38 released low read depth, antibody characterized with exemption ENCFF743YOX bigBed narrowPeak peaks ENCSR948QLZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX1-human ENCAB000BPO DNA False 2016-02-05 ENCODE 1 ENCFF046QEQ 13385105 ENCODE Processing Pipeline b3ad7602db03ada65ad0bf104c1e829c https://www.encodeproject.org/files/ENCFF743YOX/@@download/ENCFF743YOX.bigBed GRCh38 released low read depth, antibody characterized with exemption ENCFF191MYC bed narrowPeak conservative idr thresholded peaks ENCSR948QLZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX1-human ENCAB000BPO DNA False 2016-02-05 ENCODE 1, 2 ENCFF046QEQ, ENCFF419RSJ, ENCFF670HFC, ENCFF990SRA 176306 ENCODE Processing Pipeline 221dcf358f7454630cd40eb494850607 https://www.encodeproject.org/files/ENCFF191MYC/@@download/ENCFF191MYC.bed.gz GRCh38 released low read depth, antibody characterized with exemption ENCFF163FLA bed narrowPeak optimal idr thresholded peaks ENCSR948QLZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX1-human ENCAB000BPO DNA False 2016-02-05 ENCODE 1, 2 ENCFF046QEQ, ENCFF419RSJ, ENCFF670HFC, ENCFF990SRA 275708 ENCODE Processing Pipeline c62dfebc3a00c7cd0535bd47ec04a154 https://www.encodeproject.org/files/ENCFF163FLA/@@download/ENCFF163FLA.bed.gz GRCh38 released low read depth, antibody characterized with exemption ENCFF586NQQ bigBed narrowPeak conservative idr thresholded peaks ENCSR948QLZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX1-human ENCAB000BPO DNA False 2016-02-05 ENCODE 1, 2 ENCFF191MYC 421179 ENCODE Processing Pipeline 6d73d62dc1bfd8dbfd0ac241c3419abd https://www.encodeproject.org/files/ENCFF586NQQ/@@download/ENCFF586NQQ.bigBed GRCh38 released low read depth, antibody characterized with exemption ENCFF432ZFR bigBed narrowPeak optimal idr thresholded peaks ENCSR948QLZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX1-human ENCAB000BPO DNA False 2016-02-05 ENCODE 1, 2 ENCFF163FLA 584395 ENCODE Processing Pipeline 8ad3f9cfa73c3b40faabbc89ce6f34c5 https://www.encodeproject.org/files/ENCFF432ZFR/@@download/ENCFF432ZFR.bigBed GRCh38 released low read depth, antibody characterized with exemption ENCFF284HTQ bam unfiltered alignments ENCSR948QLZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX1-human ENCAB000BPO DNA False 2016-02-05 ENCODE 1 50 ENCFF665CXV, ENCFF807MUK 1710856975 ENCODE Processing Pipeline 540e789e351be00cb6571797c24525bf https://www.encodeproject.org/files/ENCFF284HTQ/@@download/ENCFF284HTQ.bam hg19 released low read depth, antibody characterized with exemption ENCFF997CVO bam unfiltered alignments ENCSR948QLZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX1-human ENCAB000BPO DNA False 2016-02-05 ENCODE 2 50 ENCFF807MUK, ENCFF946BAN 1339666498 ENCODE Processing Pipeline 73abeb30ab16f2c60734f48f79cf277c https://www.encodeproject.org/files/ENCFF997CVO/@@download/ENCFF997CVO.bam hg19 released low read depth, antibody characterized with exemption ENCFF476EGJ bam alignments ENCSR948QLZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX1-human ENCAB000BPO DNA False 2016-02-05 ENCODE 1 50 ENCFF665CXV, ENCFF807MUK 1222977518 ENCODE Processing Pipeline c808f5e505d29c48bc3e06918611ee38 https://www.encodeproject.org/files/ENCFF476EGJ/@@download/ENCFF476EGJ.bam hg19 released low read depth, antibody characterized with exemption ENCFF798GLN bam alignments ENCSR948QLZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX1-human ENCAB000BPO DNA False 2016-02-05 ENCODE 2 50 ENCFF807MUK, ENCFF946BAN 932941854 ENCODE Processing Pipeline e04c78fc03112d729e56b6067dd5c447 https://www.encodeproject.org/files/ENCFF798GLN/@@download/ENCFF798GLN.bam hg19 released low read depth, antibody characterized with exemption ENCFF814LTT bigBed narrowPeak peaks ENCSR948QLZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX1-human ENCAB000BPO DNA False 2016-02-05 ENCODE 2 ENCFF135TJX 13062200 ENCODE Processing Pipeline 63fd2f363d7bec68ff5f39430572f07b https://www.encodeproject.org/files/ENCFF814LTT/@@download/ENCFF814LTT.bigBed hg19 released low read depth, antibody characterized with exemption ENCFF135ALT bigBed narrowPeak conservative idr thresholded peaks ENCSR948QLZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX1-human ENCAB000BPO DNA False 2016-02-05 ENCODE 1, 2 ENCFF740VTJ 333869 ENCODE Processing Pipeline 50f4dd1a44e3fd10e64ac9e5c123d17c https://www.encodeproject.org/files/ENCFF135ALT/@@download/ENCFF135ALT.bigBed hg19 released low read depth, antibody characterized with exemption ENCFF484DKT bed narrowPeak optimal idr thresholded peaks ENCSR948QLZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX1-human ENCAB000BPO DNA False 2016-02-05 ENCODE 1, 2 ENCFF001TDO, ENCFF135TJX, ENCFF491AYX, ENCFF908UOT 257946 ENCODE Processing Pipeline 4ef8751c301c235ed067836ca888b02b https://www.encodeproject.org/files/ENCFF484DKT/@@download/ENCFF484DKT.bed.gz hg19 released low read depth, antibody characterized with exemption ENCFF670CQZ bigBed narrowPeak optimal idr thresholded peaks ENCSR948QLZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX1-human ENCAB000BPO DNA False 2016-02-05 ENCODE 1, 2 ENCFF484DKT 557243 ENCODE Processing Pipeline 1afc306179e4c73457c3cce37a5bf401 https://www.encodeproject.org/files/ENCFF670CQZ/@@download/ENCFF670CQZ.bigBed hg19 released low read depth, antibody characterized with exemption ENCFF016ERH bigWig signal p-value ENCSR948QLZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX1-human ENCAB000BPO DNA False 2016-02-05 ENCODE 2 ENCFF061QOJ, ENCFF798GLN 784261797 ENCODE Processing Pipeline d811814ddc03314c6a6b7b30796ef5bd https://www.encodeproject.org/files/ENCFF016ERH/@@download/ENCFF016ERH.bigWig hg19 released low read depth, antibody characterized with exemption ENCFF135TJX bed narrowPeak peaks ENCSR948QLZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX1-human ENCAB000BPO DNA False 2016-02-05 ENCODE 2 ENCFF061QOJ, ENCFF798GLN 6448558 ENCODE Processing Pipeline fe994e22e5535e903c5d1b003e19c321 https://www.encodeproject.org/files/ENCFF135TJX/@@download/ENCFF135TJX.bed.gz hg19 released low read depth, antibody characterized with exemption ENCFF908UOT bed narrowPeak peaks ENCSR948QLZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX1-human ENCAB000BPO DNA False 2016-02-05 ENCODE 1, 2 ENCFF061QOJ, ENCFF227XXD, ENCFF476EGJ, ENCFF798GLN 7071954 ENCODE Processing Pipeline f23079c4c92c24d44c132d688663e3f5 https://www.encodeproject.org/files/ENCFF908UOT/@@download/ENCFF908UOT.bed.gz hg19 released low read depth, antibody characterized with exemption ENCFF843TPP bigWig signal p-value ENCSR948QLZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX1-human ENCAB000BPO DNA False 2016-02-05 ENCODE 1 ENCFF227XXD, ENCFF476EGJ 796755153 ENCODE Processing Pipeline 393b2eab317cdf415ce40ec7c8c3df8e https://www.encodeproject.org/files/ENCFF843TPP/@@download/ENCFF843TPP.bigWig hg19 released low read depth, antibody characterized with exemption ENCFF985MBQ bigWig fold change over control ENCSR948QLZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX1-human ENCAB000BPO DNA False 2016-02-05 ENCODE 1 ENCFF227XXD, ENCFF476EGJ 539444918 ENCODE Processing Pipeline 9ac181a6cdfcd0537310e4bd6e6e4b08 https://www.encodeproject.org/files/ENCFF985MBQ/@@download/ENCFF985MBQ.bigWig hg19 released low read depth, antibody characterized with exemption ENCFF779XVG bigWig signal p-value ENCSR948QLZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX1-human ENCAB000BPO DNA False 2016-02-05 ENCODE 1, 2 ENCFF061QOJ, ENCFF227XXD, ENCFF476EGJ, ENCFF798GLN 1319242479 ENCODE Processing Pipeline 462f8ca41d0ab6598d72ce934e7738d2 https://www.encodeproject.org/files/ENCFF779XVG/@@download/ENCFF779XVG.bigWig hg19 released low read depth, antibody characterized with exemption ENCFF824OMP bigWig fold change over control ENCSR948QLZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX1-human ENCAB000BPO DNA False 2016-02-05 ENCODE 2 ENCFF061QOJ, ENCFF798GLN 446286079 ENCODE Processing Pipeline 68e6d2f2f20ac9b2a072385ed4c3a5d5 https://www.encodeproject.org/files/ENCFF824OMP/@@download/ENCFF824OMP.bigWig hg19 released low read depth, antibody characterized with exemption ENCFF762MAM bigWig fold change over control ENCSR948QLZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX1-human ENCAB000BPO DNA False 2016-02-05 ENCODE 1, 2 ENCFF061QOJ, ENCFF227XXD, ENCFF476EGJ, ENCFF798GLN 1085683293 ENCODE Processing Pipeline 575de9171f2dc30c44e5e472772263ef https://www.encodeproject.org/files/ENCFF762MAM/@@download/ENCFF762MAM.bigWig hg19 released low read depth, antibody characterized with exemption ENCFF491AYX bed narrowPeak peaks ENCSR948QLZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX1-human ENCAB000BPO DNA False 2016-02-05 ENCODE 1 ENCFF227XXD, ENCFF476EGJ 6115452 ENCODE Processing Pipeline dda65365ecde455a4549c284db4677e3 https://www.encodeproject.org/files/ENCFF491AYX/@@download/ENCFF491AYX.bed.gz hg19 released low read depth, antibody characterized with exemption ENCFF088DLY bigBed narrowPeak peaks ENCSR948QLZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX1-human ENCAB000BPO DNA False 2016-02-05 ENCODE 1 ENCFF491AYX 13348674 ENCODE Processing Pipeline 764cbffa4b0bdb61befe3011177a48d2 https://www.encodeproject.org/files/ENCFF088DLY/@@download/ENCFF088DLY.bigBed hg19 released low read depth, antibody characterized with exemption ENCFF125KZN bigBed narrowPeak peaks ENCSR948QLZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX1-human ENCAB000BPO DNA False 2016-02-05 ENCODE 1, 2 ENCFF908UOT 13206413 ENCODE Processing Pipeline 25c32a72f5d0e95a3d010a020d09988a https://www.encodeproject.org/files/ENCFF125KZN/@@download/ENCFF125KZN.bigBed hg19 released low read depth, antibody characterized with exemption ENCFF740VTJ bed narrowPeak conservative idr thresholded peaks ENCSR948QLZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX1-human ENCAB000BPO DNA False 2016-02-05 ENCODE 1, 2 ENCFF001TDO, ENCFF135TJX, ENCFF491AYX, ENCFF908UOT 165903 ENCODE Processing Pipeline 55a46c61ae40dbfeefbf981ed442e630 https://www.encodeproject.org/files/ENCFF740VTJ/@@download/ENCFF740VTJ.bed.gz hg19 released low read depth, antibody characterized with exemption ENCFF000YWV bam alignments ENCSR000FAJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 1 ENCFF000YXH 325430434 Sherman Weissman, Yale 646fb37d23ddb941fda0834fae292c6a https://www.encodeproject.org/files/ENCFF000YWV/@@download/ENCFF000YWV.bam hg19 released biological replicates with identical biosample insufficient read length ENCFF000YWW bam alignments ENCSR000FAJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 2 ENCFF000YXG 344769705 Sherman Weissman, Yale 719a43b38965fa74b8e6325f7dd6b214 https://www.encodeproject.org/files/ENCFF000YWW/@@download/ENCFF000YWW.bam hg19 released biological replicates with identical biosample insufficient read length ENCFF000YWX bigBed narrowPeak peaks ENCSR000FAJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE ENCFF001VOI 699144 Sherman Weissman, Yale 52f05012d76927db0aec94d450c6d73e https://www.encodeproject.org/files/ENCFF000YWX/@@download/ENCFF000YWX.bigBed hg19 released biological replicates with identical biosample insufficient read length ENCFF000YWY bigWig signal ENCSR000FAJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 302296850 Sherman Weissman, Yale 86e02c859d476b4fdc69d6ddf4d014ce https://www.encodeproject.org/files/ENCFF000YWY/@@download/ENCFF000YWY.bigWig hg19 released biological replicates with identical biosample, missing derived_from insufficient read length ENCFF000YXG fastq reads ENCSR000FAJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 2 1 27 single-ended 286322171 Sherman Weissman, Yale 6a6755d5f9a2c28a959a3d592128f707 https://www.encodeproject.org/files/ENCFF000YXG/@@download/ENCFF000YXG.fastq.gz Illumina Genome Analyzer released biological replicates with identical biosample insufficient read length, missing controlled_by ENCFF000YXH fastq reads ENCSR000FAJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 1 1 27 single-ended 263358616 Sherman Weissman, Yale 839c9bbc3f7693e6e07a70a94875390c https://www.encodeproject.org/files/ENCFF000YXH/@@download/ENCFF000YXH.fastq.gz Illumina Genome Analyzer released biological replicates with identical biosample insufficient read length, missing controlled_by ENCFF001VOI bed narrowPeak peaks ENCSR000FAJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 278310 Sherman Weissman, Yale 41d68a9c6796b020e88d2adcf9be1ba3 https://www.encodeproject.org/files/ENCFF001VOI/@@download/ENCFF001VOI.bed.gz hg19 released biological replicates with identical biosample, missing derived_from insufficient read length ENCFF002CXR bed narrowPeak optimal idr thresholded peaks ENCSR000FAJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE 372941 ENCODE Consortium Analysis Working Group c05fd64032c0e77d1958bafa8ecad68b https://www.encodeproject.org/files/ENCFF002CXR/@@download/ENCFF002CXR.bed.gz hg19 released biological replicates with identical biosample, missing derived_from insufficient read length ENCFF783XWJ bigBed narrowPeak optimal idr thresholded peaks ENCSR000FAJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2A-human ENCAB000AOC DNA see document see document False 2011-10-29 ENCODE ENCFF002CXR 993628 ENCODE Consortium 9b55480964b5e32c1de43a045c03783e https://www.encodeproject.org/files/ENCFF783XWJ/@@download/ENCFF783XWJ.bigBed hg19 released biological replicates with identical biosample insufficient read length ENCFF393ZLC fastq reads ENCSR979QYJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MNT-human ENCAB887GAG DNA False 2017-01-27 ENCODE 2 1 100 paired-ended 2 ENCFF911ICF 3572836024 Michael Snyder, Stanford 117801533caaf2e96ffaf4f59933427a SRA:SRR6214200 https://www.encodeproject.org/files/ENCFF393ZLC/@@download/ENCFF393ZLC.fastq.gz Illumina HiSeq 4000 /files/ENCFF837MIV/ released mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF678PWC fastq reads ENCSR979QYJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MNT-human ENCAB887GAG DNA False 2017-01-27 ENCODE 1 1 100 paired-ended 1 ENCFF627YOB 3235657658 Michael Snyder, Stanford 1f7b31d2cdffa8901007e9f54ffcc170 SRA:SRR6214199 https://www.encodeproject.org/files/ENCFF678PWC/@@download/ENCFF678PWC.fastq.gz Illumina HiSeq 4000 /files/ENCFF498JMO/ released mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF627YOB fastq reads ENCSR979QYJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MNT-human ENCAB887GAG DNA False 2017-01-27 ENCODE 1 1 100 paired-ended 2 ENCFF678PWC 3546874393 Michael Snyder, Stanford 0fbd0b16dec09e6dc753dfac31b12af0 SRA:SRR6214199 https://www.encodeproject.org/files/ENCFF627YOB/@@download/ENCFF627YOB.fastq.gz Illumina HiSeq 4000 /files/ENCFF502GTS/ released mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF911ICF fastq reads ENCSR979QYJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MNT-human ENCAB887GAG DNA False 2017-01-27 ENCODE 2 1 100 paired-ended 1 ENCFF393ZLC 2926449638 Michael Snyder, Stanford c01d031479282a5b7f4026409b0e60ed SRA:SRR6214200 https://www.encodeproject.org/files/ENCFF911ICF/@@download/ENCFF911ICF.fastq.gz Illumina HiSeq 4000 /files/ENCFF259GQA/ released mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF572ZQQ bam unfiltered alignments ENCSR979QYJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MNT-human ENCAB887GAG DNA False 2017-01-27 ENCODE 1 100 ENCFF627YOB, ENCFF643CGH, ENCFF678PWC 6091055817 ENCODE Processing Pipeline 89a5339b3a21d4e453ba2813521635ca https://www.encodeproject.org/files/ENCFF572ZQQ/@@download/ENCFF572ZQQ.bam GRCh38 released mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF291YBA bam unfiltered alignments ENCSR979QYJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MNT-human ENCAB887GAG DNA False 2017-01-27 ENCODE 2 100 ENCFF393ZLC, ENCFF643CGH, ENCFF911ICF 5635087263 ENCODE Processing Pipeline 366c950ad1b6c0a0233caa1058539173 https://www.encodeproject.org/files/ENCFF291YBA/@@download/ENCFF291YBA.bam GRCh38 released mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF550JXQ bam unfiltered alignments ENCSR979QYJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MNT-human ENCAB887GAG DNA False 2017-01-27 ENCODE 1 100 ENCFF627YOB, ENCFF678PWC, ENCFF807MUK 6088574060 ENCODE Processing Pipeline 6b73ae2a6e3047aac42fe8405d65c708 https://www.encodeproject.org/files/ENCFF550JXQ/@@download/ENCFF550JXQ.bam hg19 released mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF295BSY bam unfiltered alignments ENCSR979QYJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MNT-human ENCAB887GAG DNA False 2017-01-27 ENCODE 2 100 ENCFF393ZLC, ENCFF807MUK, ENCFF911ICF 5633592441 ENCODE Processing Pipeline 64e2d1330f75db7a816b00facc0c4354 https://www.encodeproject.org/files/ENCFF295BSY/@@download/ENCFF295BSY.bam hg19 released mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF036IOO bam alignments ENCSR979QYJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MNT-human ENCAB887GAG DNA False 2017-01-27 ENCODE 2 100 ENCFF393ZLC, ENCFF643CGH, ENCFF911ICF 3260076884 ENCODE Processing Pipeline 5c4d88055d36f0e822b99b792c29217e https://www.encodeproject.org/files/ENCFF036IOO/@@download/ENCFF036IOO.bam GRCh38 released mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF464PKB bam alignments ENCSR979QYJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MNT-human ENCAB887GAG DNA False 2017-01-27 ENCODE 2 100 ENCFF393ZLC, ENCFF807MUK, ENCFF911ICF 3257607311 ENCODE Processing Pipeline e12739e65a2d534fce721213e87da6b3 https://www.encodeproject.org/files/ENCFF464PKB/@@download/ENCFF464PKB.bam hg19 released mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF117LCX bam alignments ENCSR979QYJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MNT-human ENCAB887GAG DNA False 2017-01-27 ENCODE 1 100 ENCFF627YOB, ENCFF678PWC, ENCFF807MUK 4042046673 ENCODE Processing Pipeline 776297779d610ab370631e785f4cde17 https://www.encodeproject.org/files/ENCFF117LCX/@@download/ENCFF117LCX.bam hg19 released mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF358HOW bam alignments ENCSR979QYJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MNT-human ENCAB887GAG DNA False 2017-01-27 ENCODE 1 100 ENCFF627YOB, ENCFF643CGH, ENCFF678PWC 4045351895 ENCODE Processing Pipeline 5fab3ec07a99cb0567ebe5f977bd61c1 https://www.encodeproject.org/files/ENCFF358HOW/@@download/ENCFF358HOW.bam GRCh38 released mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF645OKI bigBed narrowPeak peaks ENCSR979QYJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MNT-human ENCAB887GAG DNA False 2017-01-27 ENCODE 2 ENCFF513RYM 13132242 ENCODE Processing Pipeline 3188eb273db83b48a8b35354e4eff18e https://www.encodeproject.org/files/ENCFF645OKI/@@download/ENCFF645OKI.bigBed hg19 released mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF443HME bigBed narrowPeak peaks ENCSR979QYJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MNT-human ENCAB887GAG DNA False 2017-01-27 ENCODE 1, 2 ENCFF215LBC 12914012 ENCODE Processing Pipeline 1104a932316f8cdc398d4949795fba1a https://www.encodeproject.org/files/ENCFF443HME/@@download/ENCFF443HME.bigBed hg19 released mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF461DTF bigWig signal p-value ENCSR979QYJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MNT-human ENCAB887GAG DNA False 2017-01-27 ENCODE 1 ENCFF117LCX, ENCFF160VXC 1041286276 ENCODE Processing Pipeline ddce5b0a3050c2357d1013efedeb1da8 https://www.encodeproject.org/files/ENCFF461DTF/@@download/ENCFF461DTF.bigWig hg19 released mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF671OVE bed narrowPeak peaks ENCSR979QYJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MNT-human ENCAB887GAG DNA False 2017-01-27 ENCODE 1 ENCFF117LCX, ENCFF160VXC 7000743 ENCODE Processing Pipeline 6128a1faa54737510c43c78ce33a8341 https://www.encodeproject.org/files/ENCFF671OVE/@@download/ENCFF671OVE.bed.gz hg19 released mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF513RYM bed narrowPeak peaks ENCSR979QYJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MNT-human ENCAB887GAG DNA False 2017-01-27 ENCODE 2 ENCFF464PKB, ENCFF834TUP 7019864 ENCODE Processing Pipeline 8a4ba87bbb665cd7592881e04722644b https://www.encodeproject.org/files/ENCFF513RYM/@@download/ENCFF513RYM.bed.gz hg19 released mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF215LBC bed narrowPeak peaks ENCSR979QYJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MNT-human ENCAB887GAG DNA False 2017-01-27 ENCODE 1, 2 ENCFF117LCX, ENCFF160VXC, ENCFF464PKB, ENCFF834TUP 7247453 ENCODE Processing Pipeline 80089c9088b36cf66fd54bf9a024a8e7 https://www.encodeproject.org/files/ENCFF215LBC/@@download/ENCFF215LBC.bed.gz hg19 released mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF704GEC bigBed narrowPeak conservative idr thresholded peaks ENCSR979QYJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MNT-human ENCAB887GAG DNA False 2017-01-27 ENCODE 1, 2 ENCFF578SWL 872680 ENCODE Processing Pipeline 93c352bbe8105a39ef01bb4b6c333376 https://www.encodeproject.org/files/ENCFF704GEC/@@download/ENCFF704GEC.bigBed hg19 released mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF896ZXR bigWig signal p-value ENCSR979QYJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MNT-human ENCAB887GAG DNA False 2017-01-27 ENCODE 1, 2 ENCFF117LCX, ENCFF160VXC, ENCFF464PKB, ENCFF834TUP 1805275412 ENCODE Processing Pipeline 7fa217d77d0128be48a0c817e1f7f2f6 https://www.encodeproject.org/files/ENCFF896ZXR/@@download/ENCFF896ZXR.bigWig hg19 released mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF722YBQ bigWig fold change over control ENCSR979QYJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MNT-human ENCAB887GAG DNA False 2017-01-27 ENCODE 1 ENCFF117LCX, ENCFF160VXC 1352296634 ENCODE Processing Pipeline 3228a9f0ee78d3505ea04d0a1cac73f2 https://www.encodeproject.org/files/ENCFF722YBQ/@@download/ENCFF722YBQ.bigWig hg19 released mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF193MBE bigWig fold change over control ENCSR979QYJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MNT-human ENCAB887GAG DNA False 2017-01-27 ENCODE 2 ENCFF464PKB, ENCFF834TUP 1260557879 ENCODE Processing Pipeline 8f77a530ba45144a8e3f441e3fd7f304 https://www.encodeproject.org/files/ENCFF193MBE/@@download/ENCFF193MBE.bigWig hg19 released mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF127ASJ bigBed narrowPeak peaks ENCSR979QYJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MNT-human ENCAB887GAG DNA False 2017-01-27 ENCODE 1 ENCFF671OVE 13054861 ENCODE Processing Pipeline fb19c583b398bf3264d2d78d79b5a660 https://www.encodeproject.org/files/ENCFF127ASJ/@@download/ENCFF127ASJ.bigBed hg19 released mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF973OME bed narrowPeak optimal idr thresholded peaks ENCSR979QYJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MNT-human ENCAB887GAG DNA False 2017-01-27 ENCODE 1, 2 ENCFF001TDO, ENCFF215LBC, ENCFF513RYM, ENCFF671OVE 404380 ENCODE Processing Pipeline 19ef8e287c2b6736403247c2b5842fef https://www.encodeproject.org/files/ENCFF973OME/@@download/ENCFF973OME.bed.gz hg19 released mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF754NOL bigWig signal p-value ENCSR979QYJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MNT-human ENCAB887GAG DNA False 2017-01-27 ENCODE 2 ENCFF464PKB, ENCFF834TUP 1116139457 ENCODE Processing Pipeline a7f32906c8c5574cd61c8372e080a5a0 https://www.encodeproject.org/files/ENCFF754NOL/@@download/ENCFF754NOL.bigWig hg19 released mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF205WHE bigWig fold change over control ENCSR979QYJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MNT-human ENCAB887GAG DNA False 2017-01-27 ENCODE 1, 2 ENCFF117LCX, ENCFF160VXC, ENCFF464PKB, ENCFF834TUP 2240720591 ENCODE Processing Pipeline befc786b9b3758b2713a63727d8d6ad0 https://www.encodeproject.org/files/ENCFF205WHE/@@download/ENCFF205WHE.bigWig hg19 released mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF578SWL bed narrowPeak conservative idr thresholded peaks ENCSR979QYJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MNT-human ENCAB887GAG DNA False 2017-01-27 ENCODE 1, 2 ENCFF001TDO, ENCFF215LBC, ENCFF513RYM, ENCFF671OVE 357006 ENCODE Processing Pipeline 1c89e99464115b04700766624858774e https://www.encodeproject.org/files/ENCFF578SWL/@@download/ENCFF578SWL.bed.gz hg19 released mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF060WRW bigBed narrowPeak optimal idr thresholded peaks ENCSR979QYJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MNT-human ENCAB887GAG DNA False 2017-01-27 ENCODE 1, 2 ENCFF973OME 962859 ENCODE Processing Pipeline 7bb91e6f0184d0b0f1c774fc36be8ee3 https://www.encodeproject.org/files/ENCFF060WRW/@@download/ENCFF060WRW.bigBed hg19 released mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF804HFO bigWig signal p-value ENCSR979QYJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MNT-human ENCAB887GAG DNA False 2017-01-27 ENCODE 1 ENCFF358HOW 1166814669 ENCODE Processing Pipeline d5d687daec37beda9160c14b84e82813 https://www.encodeproject.org/files/ENCFF804HFO/@@download/ENCFF804HFO.bigWig GRCh38 released mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF450IBL bigWig signal p-value ENCSR979QYJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MNT-human ENCAB887GAG DNA False 2017-01-27 ENCODE 2 ENCFF036IOO 1238980674 ENCODE Processing Pipeline bedea026bba091a0ec8c159557d183eb https://www.encodeproject.org/files/ENCFF450IBL/@@download/ENCFF450IBL.bigWig GRCh38 released mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF501PKI bigWig signal p-value ENCSR979QYJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MNT-human ENCAB887GAG DNA False 2017-01-27 ENCODE 1, 2 ENCFF036IOO, ENCFF358HOW 1925573263 ENCODE Processing Pipeline 121f9a8e9a2df1a84d194fd09a8cd4dd https://www.encodeproject.org/files/ENCFF501PKI/@@download/ENCFF501PKI.bigWig GRCh38 released mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF980SFN bigWig fold change over control ENCSR979QYJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MNT-human ENCAB887GAG DNA False 2017-01-27 ENCODE 1 ENCFF358HOW 1357514208 ENCODE Processing Pipeline 12a25a727cdab791aa703bf187c2c0dd https://www.encodeproject.org/files/ENCFF980SFN/@@download/ENCFF980SFN.bigWig GRCh38 released mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF038GFD bigWig fold change over control ENCSR979QYJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MNT-human ENCAB887GAG DNA False 2017-01-27 ENCODE 2 ENCFF036IOO 1248803864 ENCODE Processing Pipeline 671cea7eb34a0838472015c3fb724d21 https://www.encodeproject.org/files/ENCFF038GFD/@@download/ENCFF038GFD.bigWig GRCh38 released mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF665LAS bigWig fold change over control ENCSR979QYJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MNT-human ENCAB887GAG DNA False 2017-01-27 ENCODE 1, 2 ENCFF036IOO, ENCFF358HOW 2232836750 ENCODE Processing Pipeline dab0a5f09802f1130b0acb4d24570754 https://www.encodeproject.org/files/ENCFF665LAS/@@download/ENCFF665LAS.bigWig GRCh38 released mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF506MLA bed narrowPeak peaks ENCSR979QYJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MNT-human ENCAB887GAG DNA False 2017-01-27 ENCODE 1 ENCFF358HOW 7007806 ENCODE Processing Pipeline e7ab81cf77f80f93ab12adba474b1ab4 https://www.encodeproject.org/files/ENCFF506MLA/@@download/ENCFF506MLA.bed.gz GRCh38 released mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF197KEG bed narrowPeak peaks ENCSR979QYJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MNT-human ENCAB887GAG DNA False 2017-01-27 ENCODE 2 ENCFF036IOO 7011676 ENCODE Processing Pipeline 25da779ebf1630e3d426a9f118431db1 https://www.encodeproject.org/files/ENCFF197KEG/@@download/ENCFF197KEG.bed.gz GRCh38 released mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF540KLM bed narrowPeak peaks ENCSR979QYJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MNT-human ENCAB887GAG DNA False 2017-01-27 ENCODE 1, 2 ENCFF036IOO, ENCFF358HOW 7253030 ENCODE Processing Pipeline af5fe5f2849bfb651fb4411852ab8619 https://www.encodeproject.org/files/ENCFF540KLM/@@download/ENCFF540KLM.bed.gz GRCh38 released mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF911ZDH bigBed narrowPeak peaks ENCSR979QYJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MNT-human ENCAB887GAG DNA False 2017-01-27 ENCODE 1 ENCFF506MLA 13072478 ENCODE Processing Pipeline 88cf9bf68769ce0f7622d1139fb10e29 https://www.encodeproject.org/files/ENCFF911ZDH/@@download/ENCFF911ZDH.bigBed GRCh38 released mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF997YPX bigBed narrowPeak peaks ENCSR979QYJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MNT-human ENCAB887GAG DNA False 2017-01-27 ENCODE 2 ENCFF197KEG 13131854 ENCODE Processing Pipeline d6d7c45451f1d4871071882343572319 https://www.encodeproject.org/files/ENCFF997YPX/@@download/ENCFF997YPX.bigBed GRCh38 released mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF349DNC bigBed narrowPeak peaks ENCSR979QYJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MNT-human ENCAB887GAG DNA False 2017-01-27 ENCODE 1, 2 ENCFF540KLM 12928388 ENCODE Processing Pipeline a3bc15dc650a652db1e76379235d3cea https://www.encodeproject.org/files/ENCFF349DNC/@@download/ENCFF349DNC.bigBed GRCh38 released mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF596TWD bed narrowPeak conservative idr thresholded peaks ENCSR979QYJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MNT-human ENCAB887GAG DNA False 2017-01-27 ENCODE 1, 2 ENCFF197KEG, ENCFF419RSJ, ENCFF506MLA, ENCFF540KLM 358929 ENCODE Processing Pipeline 95c6309ea56b3edfdbe5a4f16bedc7aa https://www.encodeproject.org/files/ENCFF596TWD/@@download/ENCFF596TWD.bed.gz GRCh38 released mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF378XFW bigBed narrowPeak conservative idr thresholded peaks ENCSR979QYJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MNT-human ENCAB887GAG DNA False 2017-01-27 ENCODE 1, 2 ENCFF596TWD 879043 ENCODE Processing Pipeline 478cd9064d249a3872d5b295694d9949 https://www.encodeproject.org/files/ENCFF378XFW/@@download/ENCFF378XFW.bigBed GRCh38 released mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF454QQD bed narrowPeak optimal idr thresholded peaks ENCSR979QYJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MNT-human ENCAB887GAG DNA False 2017-01-27 ENCODE 1, 2 ENCFF197KEG, ENCFF419RSJ, ENCFF506MLA, ENCFF540KLM 409477 ENCODE Processing Pipeline 772a82f2af4913c70907f14868bbe9d7 https://www.encodeproject.org/files/ENCFF454QQD/@@download/ENCFF454QQD.bed.gz GRCh38 released mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF501YVJ bigBed narrowPeak optimal idr thresholded peaks ENCSR979QYJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens MNT-human ENCAB887GAG DNA False 2017-01-27 ENCODE 1, 2 ENCFF454QQD 975201 ENCODE Processing Pipeline b00c8be2160f9820af64a5fe1b897495 https://www.encodeproject.org/files/ENCFF501YVJ/@@download/ENCFF501YVJ.bigBed GRCh38 released mild to moderate bottlenecking, moderate library complexity missing control alignments ENCFF000YOW fastq reads ENCSR000FAV ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 1 1 27 single-ended 654223052 Sherman Weissman, Yale f3a1fb60b75e3b633ef8dff7f4b9574f https://www.encodeproject.org/files/ENCFF000YOW/@@download/ENCFF000YOW.fastq.gz Illumina Genome Analyzer /files/ENCFF000YOV/ released control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF000YOY fastq reads ENCSR000FAV ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 2 1 27 single-ended 593406344 Sherman Weissman, Yale 6585ccd8b3af4e843440f9e251278e52 https://www.encodeproject.org/files/ENCFF000YOY/@@download/ENCFF000YOY.fastq.gz Illumina Genome Analyzer /files/ENCFF000YOV/ released control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF000YZN bam alignments ENCSR000FAV ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 1 ENCFF000YOW 848983675 Sherman Weissman, Yale 5321dcccc580b5ad82f618ef1ad8c309 https://www.encodeproject.org/files/ENCFF000YZN/@@download/ENCFF000YZN.bam hg19 archived control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF000YZO bam alignments ENCSR000FAV ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 2 ENCFF000YOY 771477520 Sherman Weissman, Yale 60875820357603b55b91c165714bcb93 https://www.encodeproject.org/files/ENCFF000YZO/@@download/ENCFF000YZO.bam hg19 archived control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF000YZP bigBed narrowPeak peaks ENCSR000FAV ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE ENCFF001VOS 103087 Sherman Weissman, Yale 55fb96df3f67048551bc286dc9efb799 https://www.encodeproject.org/files/ENCFF000YZP/@@download/ENCFF000YZP.bigBed hg19 archived control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF000YZQ bigWig signal ENCSR000FAV ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 412996834 Sherman Weissman, Yale bc0bf6e496e3cb1f955fe4aba0066c04 https://www.encodeproject.org/files/ENCFF000YZQ/@@download/ENCFF000YZQ.bigWig hg19 archived control low read depth biological replicates with identical biosample, missing derived_from insufficient read length, insufficient read depth ENCFF001VOS bed narrowPeak peaks ENCSR000FAV ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 6887 Sherman Weissman, Yale 3ee906e3f2b296a935a77fbe0cadbcd4 https://www.encodeproject.org/files/ENCFF001VOS/@@download/ENCFF001VOS.bed.gz hg19 archived control low read depth biological replicates with identical biosample, missing derived_from insufficient read length, insufficient read depth ENCFF002CYB bed narrowPeak optimal idr thresholded peaks ENCSR000FAV ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 40339 ENCODE Consortium Analysis Working Group 1718fd972f2325347a55591909f5d6da https://www.encodeproject.org/files/ENCFF002CYB/@@download/ENCFF002CYB.bed.gz hg19 archived control low read depth biological replicates with identical biosample, missing derived_from insufficient read length, insufficient read depth ENCFF024UQS bigBed narrowPeak optimal idr thresholded peaks ENCSR000FAV ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE ENCFF002CYB 173439 ENCODE Consortium 52e88da23c1a15b3236d142354ca8c05 https://www.encodeproject.org/files/ENCFF024UQS/@@download/ENCFF024UQS.bigBed hg19 archived control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF581MWG bam unfiltered alignments ENCSR000FAV ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 2 27 ENCFF000YOY, ENCFF643CGH 774075302 ENCODE Processing Pipeline 08e4e284d847d1370f567d71676be289 https://www.encodeproject.org/files/ENCFF581MWG/@@download/ENCFF581MWG.bam GRCh38 released control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF463LMJ bam alignments ENCSR000FAV ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 2 27 ENCFF000YOY, ENCFF643CGH 297505948 ENCODE Processing Pipeline ca3e661fee7e4464b51a128972cdae99 https://www.encodeproject.org/files/ENCFF463LMJ/@@download/ENCFF463LMJ.bam GRCh38 released control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF473CUL bam unfiltered alignments ENCSR000FAV ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 1 27 ENCFF000YOW, ENCFF643CGH 852818409 ENCODE Processing Pipeline c7de386f16284fbb58b8810d977cada7 https://www.encodeproject.org/files/ENCFF473CUL/@@download/ENCFF473CUL.bam GRCh38 released control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF479UPB bam unfiltered alignments ENCSR000FAV ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 2 27 ENCFF000YOY, ENCFF807MUK 772076460 ENCODE Processing Pipeline 9a8e114fd78e7c6de06f2d7e8aa07cc8 https://www.encodeproject.org/files/ENCFF479UPB/@@download/ENCFF479UPB.bam hg19 released control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF465UCG bam alignments ENCSR000FAV ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 2 27 ENCFF000YOY, ENCFF807MUK 297874800 ENCODE Processing Pipeline 4da05d8fc8d1ef48310a5a81d6373ba0 https://www.encodeproject.org/files/ENCFF465UCG/@@download/ENCFF465UCG.bam hg19 released control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF403WNR bam alignments ENCSR000FAV ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 1 27 ENCFF000YOW, ENCFF643CGH 324701596 ENCODE Processing Pipeline 04d0312b2d3e82d850c3fa7cf7cec30d https://www.encodeproject.org/files/ENCFF403WNR/@@download/ENCFF403WNR.bam GRCh38 released control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF764OHG bam alignments ENCSR000FAV ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 1 27 ENCFF000YOW, ENCFF807MUK 325114367 ENCODE Processing Pipeline da1a08a467db23ad3de385cc750d1191 https://www.encodeproject.org/files/ENCFF764OHG/@@download/ENCFF764OHG.bam hg19 released control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF524MMM bam unfiltered alignments ENCSR000FAV ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 1 27 ENCFF000YOW, ENCFF807MUK 849799807 ENCODE Processing Pipeline 025b8603617926dc96132a1268bed6be https://www.encodeproject.org/files/ENCFF524MMM/@@download/ENCFF524MMM.bam hg19 released control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF215GNU bigWig signal p-value ENCSR000FAV ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 1 ENCFF650MOB, ENCFF764OHG 236107967 ENCODE Processing Pipeline 62f4b5a0eb7cdb2e7bfeedd87dd8aea0 https://www.encodeproject.org/files/ENCFF215GNU/@@download/ENCFF215GNU.bigWig hg19 released control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF369GRE bigWig signal p-value ENCSR000FAV ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 1 ENCFF403WNR, ENCFF767FSP 232397932 ENCODE Processing Pipeline c5229fe3ed884dff15cd1a58ec4e4a92 https://www.encodeproject.org/files/ENCFF369GRE/@@download/ENCFF369GRE.bigWig GRCh38 released control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF325ULG bigWig signal p-value ENCSR000FAV ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 2 ENCFF465UCG, ENCFF650MOB 267570140 ENCODE Processing Pipeline 89dd53b45bd246c521d100526ee7ba68 https://www.encodeproject.org/files/ENCFF325ULG/@@download/ENCFF325ULG.bigWig hg19 released control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF622FBS bigWig signal p-value ENCSR000FAV ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 2 ENCFF463LMJ, ENCFF767FSP 287969776 ENCODE Processing Pipeline 1e1afbed14e856d9a61ea89f7c90d314 https://www.encodeproject.org/files/ENCFF622FBS/@@download/ENCFF622FBS.bigWig GRCh38 released control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF535LOZ bigWig signal p-value ENCSR000FAV ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF465UCG, ENCFF650MOB, ENCFF764OHG 293790861 ENCODE Processing Pipeline 2a857ebe80babc6c3cb25e08cbf1462e https://www.encodeproject.org/files/ENCFF535LOZ/@@download/ENCFF535LOZ.bigWig hg19 released control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF773ESK bigWig fold change over control ENCSR000FAV ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 2 ENCFF463LMJ, ENCFF767FSP 135052850 ENCODE Processing Pipeline c7e289cf1a2ae15c9a5267b85b368c4d https://www.encodeproject.org/files/ENCFF773ESK/@@download/ENCFF773ESK.bigWig GRCh38 released control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF622FPS bed narrowPeak peaks ENCSR000FAV ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF465UCG, ENCFF650MOB, ENCFF764OHG 4185597 ENCODE Processing Pipeline cae15d972cebb57bdfb84f52d5b0076f https://www.encodeproject.org/files/ENCFF622FPS/@@download/ENCFF622FPS.bed.gz hg19 released control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF106TZC bigWig fold change over control ENCSR000FAV ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 1 ENCFF403WNR, ENCFF767FSP 139013379 ENCODE Processing Pipeline 3ce67248cd7cafe873c7834338697a97 https://www.encodeproject.org/files/ENCFF106TZC/@@download/ENCFF106TZC.bigWig GRCh38 released control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF627HUR bigWig fold change over control ENCSR000FAV ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 2 ENCFF465UCG, ENCFF650MOB 136424137 ENCODE Processing Pipeline 2a637f45e5448555930b82c8e703291a https://www.encodeproject.org/files/ENCFF627HUR/@@download/ENCFF627HUR.bigWig hg19 released control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF361XNT bigWig fold change over control ENCSR000FAV ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 1 ENCFF650MOB, ENCFF764OHG 143882123 ENCODE Processing Pipeline 177e9c15ff33b7840370a5e842033489 https://www.encodeproject.org/files/ENCFF361XNT/@@download/ENCFF361XNT.bigWig hg19 released control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF695SDJ bed narrowPeak peaks ENCSR000FAV ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 1 ENCFF650MOB, ENCFF764OHG 2226729 ENCODE Processing Pipeline e5fa53b68f9680bfff30fcb11a3997e2 https://www.encodeproject.org/files/ENCFF695SDJ/@@download/ENCFF695SDJ.bed.gz hg19 released control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF026AVN bigWig signal p-value ENCSR000FAV ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF403WNR, ENCFF463LMJ, ENCFF767FSP 294797097 ENCODE Processing Pipeline 6c19a294f8311058edb8f7c593dd2fa3 https://www.encodeproject.org/files/ENCFF026AVN/@@download/ENCFF026AVN.bigWig GRCh38 released control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF364CEV bigWig fold change over control ENCSR000FAV ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF403WNR, ENCFF463LMJ, ENCFF767FSP 257931676 ENCODE Processing Pipeline da8b6683be6af964e12eaf2056dc90fa https://www.encodeproject.org/files/ENCFF364CEV/@@download/ENCFF364CEV.bigWig GRCh38 released control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF490WRP bed narrowPeak peaks ENCSR000FAV ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 2 ENCFF465UCG, ENCFF650MOB 2645766 ENCODE Processing Pipeline b4c91a9f9340d89c0975816c7cdab774 https://www.encodeproject.org/files/ENCFF490WRP/@@download/ENCFF490WRP.bed.gz hg19 released control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF785LIV bigWig fold change over control ENCSR000FAV ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF465UCG, ENCFF650MOB, ENCFF764OHG 257440382 ENCODE Processing Pipeline 48259cbb20e32b0945b0543228a76c55 https://www.encodeproject.org/files/ENCFF785LIV/@@download/ENCFF785LIV.bigWig hg19 released control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF400RQY bigBed narrowPeak peaks ENCSR000FAV ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 1 ENCFF904TMD 4814411 ENCODE Processing Pipeline f55da1f92f1ecd71ba28b6d18a7370ae https://www.encodeproject.org/files/ENCFF400RQY/@@download/ENCFF400RQY.bigBed GRCh38 released control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF068CSN bed narrowPeak peaks ENCSR000FAV ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF403WNR, ENCFF463LMJ, ENCFF767FSP 4184621 ENCODE Processing Pipeline 7284864293e4e8004eac4fd81634ea18 https://www.encodeproject.org/files/ENCFF068CSN/@@download/ENCFF068CSN.bed.gz GRCh38 released control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF098NHJ bigBed narrowPeak peaks ENCSR000FAV ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 2 ENCFF490WRP 6543461 ENCODE Processing Pipeline 65880d4437d17613ffab3b46379af5a3 https://www.encodeproject.org/files/ENCFF098NHJ/@@download/ENCFF098NHJ.bigBed hg19 released control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF861RPG bigBed narrowPeak peaks ENCSR000FAV ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF622FPS 10294672 ENCODE Processing Pipeline 86348c0bbc7439980635c01c10b1bf2c https://www.encodeproject.org/files/ENCFF861RPG/@@download/ENCFF861RPG.bigBed hg19 released control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF595BKT bed narrowPeak conservative idr thresholded peaks ENCSR000FAV ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF001TDO, ENCFF490WRP, ENCFF622FPS, ENCFF695SDJ 18246 ENCODE Processing Pipeline abb69af55b20a7cbe28eb01eb54002a3 https://www.encodeproject.org/files/ENCFF595BKT/@@download/ENCFF595BKT.bed.gz hg19 released control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF904TMD bed narrowPeak peaks ENCSR000FAV ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 1 ENCFF403WNR, ENCFF767FSP 2221464 ENCODE Processing Pipeline 33e36cc30c30eb5cb3276dc9882d7824 https://www.encodeproject.org/files/ENCFF904TMD/@@download/ENCFF904TMD.bed.gz GRCh38 released control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF920DKX bed narrowPeak peaks ENCSR000FAV ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 2 ENCFF463LMJ, ENCFF767FSP 2635949 ENCODE Processing Pipeline 9bfc992fbbff0406222f1eb01565fe95 https://www.encodeproject.org/files/ENCFF920DKX/@@download/ENCFF920DKX.bed.gz GRCh38 released control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF372WXA bigBed narrowPeak peaks ENCSR000FAV ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 1 ENCFF695SDJ 4818192 ENCODE Processing Pipeline 2df25cd32b51820178cfb762c86d5ca1 https://www.encodeproject.org/files/ENCFF372WXA/@@download/ENCFF372WXA.bigBed hg19 released control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF365VTM bigBed narrowPeak peaks ENCSR000FAV ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 2 ENCFF920DKX 6536291 ENCODE Processing Pipeline 11265b0a0c877142310815293682fae1 https://www.encodeproject.org/files/ENCFF365VTM/@@download/ENCFF365VTM.bigBed GRCh38 released control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF290HTJ bed narrowPeak optimal idr thresholded peaks ENCSR000FAV ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF001TDO, ENCFF490WRP, ENCFF622FPS, ENCFF695SDJ 25619 ENCODE Processing Pipeline a9aa20b61b6e61db5f4a49be039c6f10 https://www.encodeproject.org/files/ENCFF290HTJ/@@download/ENCFF290HTJ.bed.gz hg19 released control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF030CBS bigBed narrowPeak conservative idr thresholded peaks ENCSR000FAV ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF595BKT 73576 ENCODE Processing Pipeline 82f2a4cda3d9860cda73398a1fe7108e https://www.encodeproject.org/files/ENCFF030CBS/@@download/ENCFF030CBS.bigBed hg19 released control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF181PHR bed narrowPeak conservative idr thresholded peaks ENCSR000FAV ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF068CSN, ENCFF419RSJ, ENCFF904TMD, ENCFF920DKX 18501 ENCODE Processing Pipeline 12e61019930f5ebf56452dcef5e1e09d https://www.encodeproject.org/files/ENCFF181PHR/@@download/ENCFF181PHR.bed.gz GRCh38 released control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF657VDG bigBed narrowPeak peaks ENCSR000FAV ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF068CSN 10297771 ENCODE Processing Pipeline e31b21d3b42cdfb37d8c8dd43f785e36 https://www.encodeproject.org/files/ENCFF657VDG/@@download/ENCFF657VDG.bigBed GRCh38 released control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF646MXG bed narrowPeak optimal idr thresholded peaks ENCSR000FAV ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF068CSN, ENCFF419RSJ, ENCFF904TMD, ENCFF920DKX 26514 ENCODE Processing Pipeline f89b2c4ecdac0570b786a0bd15c3ad2d https://www.encodeproject.org/files/ENCFF646MXG/@@download/ENCFF646MXG.bed.gz GRCh38 released control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF532CKD bigBed narrowPeak optimal idr thresholded peaks ENCSR000FAV ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF290HTJ 99215 ENCODE Processing Pipeline 23828b6327d296cc7edc3ce5e104be2d https://www.encodeproject.org/files/ENCFF532CKD/@@download/ENCFF532CKD.bigBed hg19 released control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF744IYR bigBed narrowPeak conservative idr thresholded peaks ENCSR000FAV ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF181PHR 74035 ENCODE Processing Pipeline 7c432e84896f3efaabcf978a0a497d6d https://www.encodeproject.org/files/ENCFF744IYR/@@download/ENCFF744IYR.bigBed GRCh38 released control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF681ZDG bigBed narrowPeak optimal idr thresholded peaks ENCSR000FAV ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 30.0 minute STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF646MXG 100344 ENCODE Processing Pipeline be6d23b40f05a653f6375fe83b0a5d0a https://www.encodeproject.org/files/ENCFF681ZDG/@@download/ENCFF681ZDG.bigBed GRCh38 released control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF862QKP bam unfiltered alignments ENCSR033VAZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens TARDBP-human ENCAB000BAX DNA False 2016-04-22 ENCODE 3 100 ENCFF228EWB, ENCFF807MUK, ENCFF922VLO 5920611211 ENCODE Processing Pipeline 8d94a9a4325d44322e2840162ee12d8a https://www.encodeproject.org/files/ENCFF862QKP/@@download/ENCFF862QKP.bam hg19 released ENCFF290RPU bam unfiltered alignments ENCSR033VAZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens TARDBP-human ENCAB000BAX DNA False 2016-04-22 ENCODE 2 100 ENCFF654EXQ, ENCFF807MUK, ENCFF996BVX 6707038731 ENCODE Processing Pipeline 16ab318f7f310295230270aaa37ac5bd https://www.encodeproject.org/files/ENCFF290RPU/@@download/ENCFF290RPU.bam hg19 released ENCFF228EWB fastq reads ENCSR033VAZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens TARDBP-human ENCAB000BAX DNA False 2016-04-22 ENCODE 3 1 100 paired-ended 2 ENCFF922VLO 2769130323 Michael Snyder, Stanford 90b297d5d31e912c5be6ad75bdfde918 SRA:SRR5112429 https://www.encodeproject.org/files/ENCFF228EWB/@@download/ENCFF228EWB.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFH/ released ENCFF996BVX fastq reads ENCSR033VAZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens TARDBP-human ENCAB000BAX DNA False 2016-04-22 ENCODE 2 1 100 paired-ended 1 ENCFF654EXQ 3098450438 Michael Snyder, Stanford 422a745d708ebc4dbc44dfa028ce8833 SRA:SRR5112428 https://www.encodeproject.org/files/ENCFF996BVX/@@download/ENCFF996BVX.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFD/ released ENCFF654EXQ fastq reads ENCSR033VAZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens TARDBP-human ENCAB000BAX DNA False 2016-04-22 ENCODE 2 1 100 paired-ended 2 ENCFF996BVX 3128788707 Michael Snyder, Stanford 29b335c50a868b6736646b9567558772 SRA:SRR5112428 https://www.encodeproject.org/files/ENCFF654EXQ/@@download/ENCFF654EXQ.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFA/ released ENCFF922VLO fastq reads ENCSR033VAZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens TARDBP-human ENCAB000BAX DNA False 2016-04-22 ENCODE 3 1 100 paired-ended 1 ENCFF228EWB 2775877539 Michael Snyder, Stanford 8f937084a277f19ee54e8d117e467219 SRA:SRR5112429 https://www.encodeproject.org/files/ENCFF922VLO/@@download/ENCFF922VLO.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFF/ released ENCFF770FOE bam alignments ENCSR033VAZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens TARDBP-human ENCAB000BAX DNA False 2016-04-22 ENCODE 2 100 ENCFF654EXQ, ENCFF807MUK, ENCFF996BVX 5811273006 ENCODE Processing Pipeline c6cf2eec682891f43f26e4248cd0ae0c https://www.encodeproject.org/files/ENCFF770FOE/@@download/ENCFF770FOE.bam hg19 released ENCFF978JTT bam alignments ENCSR033VAZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens TARDBP-human ENCAB000BAX DNA False 2016-04-22 ENCODE 3 100 ENCFF228EWB, ENCFF807MUK, ENCFF922VLO 5117185192 ENCODE Processing Pipeline 668425614033a147a739237807434f83 https://www.encodeproject.org/files/ENCFF978JTT/@@download/ENCFF978JTT.bam hg19 released ENCFF884ZQD bigWig signal p-value ENCSR033VAZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens TARDBP-human ENCAB000BAX DNA False 2016-04-22 ENCODE 2 ENCFF051LWI, ENCFF770FOE 1412164025 ENCODE Processing Pipeline 469b3bd1e1f0019bf92343d2a3b9697a https://www.encodeproject.org/files/ENCFF884ZQD/@@download/ENCFF884ZQD.bigWig hg19 released ENCFF355VNJ bigWig signal p-value ENCSR033VAZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens TARDBP-human ENCAB000BAX DNA False 2016-04-22 ENCODE 3 ENCFF581ZJL, ENCFF978JTT 1220385397 ENCODE Processing Pipeline 3b0e70daf39feab6bd229dac428f4a1a https://www.encodeproject.org/files/ENCFF355VNJ/@@download/ENCFF355VNJ.bigWig hg19 released ENCFF767XMJ bigWig fold change over control ENCSR033VAZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens TARDBP-human ENCAB000BAX DNA False 2016-04-22 ENCODE 2 ENCFF051LWI, ENCFF770FOE 1405092969 ENCODE Processing Pipeline f749741c688e0cabe8ea504f5658feb4 https://www.encodeproject.org/files/ENCFF767XMJ/@@download/ENCFF767XMJ.bigWig hg19 released ENCFF977KOS bigWig fold change over control ENCSR033VAZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens TARDBP-human ENCAB000BAX DNA False 2016-04-22 ENCODE 3 ENCFF581ZJL, ENCFF978JTT 1372434779 ENCODE Processing Pipeline 9e83c1f53782b330a4d58719a762f874 https://www.encodeproject.org/files/ENCFF977KOS/@@download/ENCFF977KOS.bigWig hg19 released ENCFF145DUR bam unfiltered alignments ENCSR033VAZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens TARDBP-human ENCAB000BAX DNA False 2016-04-22 ENCODE 2 100 ENCFF643CGH, ENCFF654EXQ, ENCFF996BVX 6715975989 ENCODE Processing Pipeline 462c1262d375ab26ee4c6b0b576ea0ee https://www.encodeproject.org/files/ENCFF145DUR/@@download/ENCFF145DUR.bam GRCh38 released ENCFF642SQY bam unfiltered alignments ENCSR033VAZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens TARDBP-human ENCAB000BAX DNA False 2016-04-22 ENCODE 3 100 ENCFF228EWB, ENCFF643CGH, ENCFF922VLO 5929067053 ENCODE Processing Pipeline 753a67aa6850e40a22cf766285ea05a2 https://www.encodeproject.org/files/ENCFF642SQY/@@download/ENCFF642SQY.bam GRCh38 released ENCFF860IRS bam alignments ENCSR033VAZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens TARDBP-human ENCAB000BAX DNA False 2016-04-22 ENCODE 3 100 ENCFF228EWB, ENCFF643CGH, ENCFF922VLO 5119317624 ENCODE Processing Pipeline dbb5326354f18a1f5c536392292fe3d3 https://www.encodeproject.org/files/ENCFF860IRS/@@download/ENCFF860IRS.bam GRCh38 released ENCFF263MBV bam alignments ENCSR033VAZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens TARDBP-human ENCAB000BAX DNA False 2016-04-22 ENCODE 2 100 ENCFF643CGH, ENCFF654EXQ, ENCFF996BVX 5814595941 ENCODE Processing Pipeline e08da8ba0ea59d85f32262d7b974d5e1 https://www.encodeproject.org/files/ENCFF263MBV/@@download/ENCFF263MBV.bam GRCh38 released ENCFF144QDR bigWig signal p-value ENCSR033VAZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens TARDBP-human ENCAB000BAX DNA False 2016-04-22 ENCODE 2 ENCFF227IZS, ENCFF263MBV 1419585233 ENCODE Processing Pipeline 78ae24c1c721cc0e4fb72f0e3affe53c https://www.encodeproject.org/files/ENCFF144QDR/@@download/ENCFF144QDR.bigWig GRCh38 released ENCFF506PZB bigWig signal p-value ENCSR033VAZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens TARDBP-human ENCAB000BAX DNA False 2016-04-22 ENCODE 3 ENCFF860IRS, ENCFF910IKB 1253551679 ENCODE Processing Pipeline 9de04a77d9cfc417a42727f0e449d4d0 https://www.encodeproject.org/files/ENCFF506PZB/@@download/ENCFF506PZB.bigWig GRCh38 released ENCFF518HIX bigWig signal p-value ENCSR033VAZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens TARDBP-human ENCAB000BAX DNA False 2016-04-22 ENCODE 2, 3 ENCFF227IZS, ENCFF263MBV, ENCFF860IRS, ENCFF910IKB 1923990443 ENCODE Processing Pipeline 4a96949117897a42a9e27434d02623b5 https://www.encodeproject.org/files/ENCFF518HIX/@@download/ENCFF518HIX.bigWig GRCh38 released ENCFF280EKZ bigWig fold change over control ENCSR033VAZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens TARDBP-human ENCAB000BAX DNA False 2016-04-22 ENCODE 2 ENCFF227IZS, ENCFF263MBV 1405596579 ENCODE Processing Pipeline 9eff2d7b02c05754ebe2c30f5978c867 https://www.encodeproject.org/files/ENCFF280EKZ/@@download/ENCFF280EKZ.bigWig GRCh38 released ENCFF804NKW bigWig fold change over control ENCSR033VAZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens TARDBP-human ENCAB000BAX DNA False 2016-04-22 ENCODE 3 ENCFF860IRS, ENCFF910IKB 1385602193 ENCODE Processing Pipeline 502b8dd661e5821ac87df26fa4d1185b https://www.encodeproject.org/files/ENCFF804NKW/@@download/ENCFF804NKW.bigWig GRCh38 released ENCFF098QMC bigWig fold change over control ENCSR033VAZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens TARDBP-human ENCAB000BAX DNA False 2016-04-22 ENCODE 2, 3 ENCFF227IZS, ENCFF263MBV, ENCFF860IRS, ENCFF910IKB 2383816812 ENCODE Processing Pipeline b870fe01c1082bd89e9bf4de05f66306 https://www.encodeproject.org/files/ENCFF098QMC/@@download/ENCFF098QMC.bigWig GRCh38 released ENCFF698PFW bed narrowPeak peaks ENCSR033VAZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens TARDBP-human ENCAB000BAX DNA False 2016-04-22 ENCODE 2 ENCFF227IZS, ENCFF263MBV 6816846 ENCODE Processing Pipeline 9d9fb9b2a61fa31b2115892e3a0973a7 https://www.encodeproject.org/files/ENCFF698PFW/@@download/ENCFF698PFW.bed.gz GRCh38 released ENCFF350AET bed narrowPeak peaks ENCSR033VAZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens TARDBP-human ENCAB000BAX DNA False 2016-04-22 ENCODE 3 ENCFF860IRS, ENCFF910IKB 6664929 ENCODE Processing Pipeline 0abc58eb407274509ee0756648997027 https://www.encodeproject.org/files/ENCFF350AET/@@download/ENCFF350AET.bed.gz GRCh38 released ENCFF617JTC bed narrowPeak peaks ENCSR033VAZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens TARDBP-human ENCAB000BAX DNA False 2016-04-22 ENCODE 2, 3 ENCFF227IZS, ENCFF263MBV, ENCFF860IRS, ENCFF910IKB 7267852 ENCODE Processing Pipeline ea204ba38af0a06568afd393be48c473 https://www.encodeproject.org/files/ENCFF617JTC/@@download/ENCFF617JTC.bed.gz GRCh38 released ENCFF344XNC bigBed narrowPeak peaks ENCSR033VAZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens TARDBP-human ENCAB000BAX DNA False 2016-04-22 ENCODE 2 ENCFF698PFW 13143502 ENCODE Processing Pipeline 0995f3ea424be98f4e51f63eaca7ee76 https://www.encodeproject.org/files/ENCFF344XNC/@@download/ENCFF344XNC.bigBed GRCh38 released ENCFF553XXQ bigBed narrowPeak peaks ENCSR033VAZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens TARDBP-human ENCAB000BAX DNA False 2016-04-22 ENCODE 3 ENCFF350AET 13377959 ENCODE Processing Pipeline 075ea91f667ae28a6f30c4c098b4252e https://www.encodeproject.org/files/ENCFF553XXQ/@@download/ENCFF553XXQ.bigBed GRCh38 released ENCFF289JBE bigBed narrowPeak peaks ENCSR033VAZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens TARDBP-human ENCAB000BAX DNA False 2016-04-22 ENCODE 2, 3 ENCFF617JTC 13190965 ENCODE Processing Pipeline 6c660d61cfc81789eeffb43f007f8c11 https://www.encodeproject.org/files/ENCFF289JBE/@@download/ENCFF289JBE.bigBed GRCh38 released ENCFF937LGS bed narrowPeak conservative idr thresholded peaks ENCSR033VAZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens TARDBP-human ENCAB000BAX DNA False 2016-04-22 ENCODE 2, 3 ENCFF350AET, ENCFF419RSJ, ENCFF617JTC, ENCFF698PFW 154306 ENCODE Processing Pipeline 10e41f35487806314be10a7bc33c89f1 https://www.encodeproject.org/files/ENCFF937LGS/@@download/ENCFF937LGS.bed.gz GRCh38 released ENCFF522JFX bigBed narrowPeak conservative idr thresholded peaks ENCSR033VAZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens TARDBP-human ENCAB000BAX DNA False 2016-04-22 ENCODE 2, 3 ENCFF937LGS 375897 ENCODE Processing Pipeline 3462e589efe0bf47d4bc762bc5b70450 https://www.encodeproject.org/files/ENCFF522JFX/@@download/ENCFF522JFX.bigBed GRCh38 released ENCFF909RMQ bed narrowPeak optimal idr thresholded peaks ENCSR033VAZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens TARDBP-human ENCAB000BAX DNA False 2016-04-22 ENCODE 2, 3 ENCFF350AET, ENCFF419RSJ, ENCFF617JTC, ENCFF698PFW 240056 ENCODE Processing Pipeline 15bf101d68f40346d3faec87fbca4aa1 https://www.encodeproject.org/files/ENCFF909RMQ/@@download/ENCFF909RMQ.bed.gz GRCh38 released ENCFF492SEP bigBed narrowPeak optimal idr thresholded peaks ENCSR033VAZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens TARDBP-human ENCAB000BAX DNA False 2016-04-22 ENCODE 2, 3 ENCFF909RMQ 526394 ENCODE Processing Pipeline 40662dc34c35ade8acec9fc58ae6a8a2 https://www.encodeproject.org/files/ENCFF492SEP/@@download/ENCFF492SEP.bigBed GRCh38 released ENCFF305FZG bigWig fold change over control ENCSR033VAZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens TARDBP-human ENCAB000BAX DNA False 2016-04-22 ENCODE 2, 3 ENCFF051LWI, ENCFF581ZJL, ENCFF770FOE, ENCFF978JTT 2380356512 ENCODE Processing Pipeline 693498957e6b866b4039a443891e033a https://www.encodeproject.org/files/ENCFF305FZG/@@download/ENCFF305FZG.bigWig hg19 released ENCFF922XNG bigWig signal p-value ENCSR033VAZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens TARDBP-human ENCAB000BAX DNA False 2016-04-22 ENCODE 2, 3 ENCFF051LWI, ENCFF581ZJL, ENCFF770FOE, ENCFF978JTT 1821139851 ENCODE Processing Pipeline 67267b74a7b8c5c3c81af3af2255b988 https://www.encodeproject.org/files/ENCFF922XNG/@@download/ENCFF922XNG.bigWig hg19 released ENCFF654INX bed narrowPeak peaks ENCSR033VAZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens TARDBP-human ENCAB000BAX DNA False 2016-04-22 ENCODE 3 ENCFF581ZJL, ENCFF978JTT 6632005 ENCODE Processing Pipeline 91abe29c9a4aed1614168c0945be1519 https://www.encodeproject.org/files/ENCFF654INX/@@download/ENCFF654INX.bed.gz hg19 released ENCFF361XVV bigBed narrowPeak conservative idr thresholded peaks ENCSR033VAZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens TARDBP-human ENCAB000BAX DNA False 2016-04-22 ENCODE 2, 3 ENCFF235UZG 371801 ENCODE Processing Pipeline c0d75c1c057e40969e6f77536b305414 https://www.encodeproject.org/files/ENCFF361XVV/@@download/ENCFF361XVV.bigBed hg19 released ENCFF261XPP bed narrowPeak optimal idr thresholded peaks ENCSR033VAZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens TARDBP-human ENCAB000BAX DNA False 2016-04-22 ENCODE 2, 3 ENCFF001TDO, ENCFF506ZBZ, ENCFF612BYB, ENCFF654INX 242184 ENCODE Processing Pipeline ac65d03826f780526495ec873aa0d673 https://www.encodeproject.org/files/ENCFF261XPP/@@download/ENCFF261XPP.bed.gz hg19 released ENCFF519FSN bigBed narrowPeak optimal idr thresholded peaks ENCSR033VAZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens TARDBP-human ENCAB000BAX DNA False 2016-04-22 ENCODE 2, 3 ENCFF261XPP 526439 ENCODE Processing Pipeline 3107dd2f15376c523fd4b809d4213a58 https://www.encodeproject.org/files/ENCFF519FSN/@@download/ENCFF519FSN.bigBed hg19 released ENCFF506ZBZ bed narrowPeak peaks ENCSR033VAZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens TARDBP-human ENCAB000BAX DNA False 2016-04-22 ENCODE 2 ENCFF051LWI, ENCFF770FOE 6818155 ENCODE Processing Pipeline 608eaff7ddd2e050aa1865b7cbf368e2 https://www.encodeproject.org/files/ENCFF506ZBZ/@@download/ENCFF506ZBZ.bed.gz hg19 released ENCFF612BYB bed narrowPeak peaks ENCSR033VAZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens TARDBP-human ENCAB000BAX DNA False 2016-04-22 ENCODE 2, 3 ENCFF051LWI, ENCFF581ZJL, ENCFF770FOE, ENCFF978JTT 7262870 ENCODE Processing Pipeline 09fd9a63d684e03969815904c0fe1c20 https://www.encodeproject.org/files/ENCFF612BYB/@@download/ENCFF612BYB.bed.gz hg19 released ENCFF007OJR bigBed narrowPeak peaks ENCSR033VAZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens TARDBP-human ENCAB000BAX DNA False 2016-04-22 ENCODE 3 ENCFF654INX 13369187 ENCODE Processing Pipeline 2ef74a51099b516baf2a1002de9726b5 https://www.encodeproject.org/files/ENCFF007OJR/@@download/ENCFF007OJR.bigBed hg19 released ENCFF088QFX bigBed narrowPeak peaks ENCSR033VAZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens TARDBP-human ENCAB000BAX DNA False 2016-04-22 ENCODE 2, 3 ENCFF612BYB 13174418 ENCODE Processing Pipeline 9f72beb164e21ff2b0383d72986ca713 https://www.encodeproject.org/files/ENCFF088QFX/@@download/ENCFF088QFX.bigBed hg19 released ENCFF235UZG bed narrowPeak conservative idr thresholded peaks ENCSR033VAZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens TARDBP-human ENCAB000BAX DNA False 2016-04-22 ENCODE 2, 3 ENCFF001TDO, ENCFF506ZBZ, ENCFF612BYB, ENCFF654INX 153665 ENCODE Processing Pipeline 457f23bc42d399c1f2eeccd3a189a518 https://www.encodeproject.org/files/ENCFF235UZG/@@download/ENCFF235UZG.bed.gz hg19 released ENCFF982TZK bigBed narrowPeak peaks ENCSR033VAZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens TARDBP-human ENCAB000BAX DNA False 2016-04-22 ENCODE 2 ENCFF506ZBZ 13128719 ENCODE Processing Pipeline e62274c1ba9f092361bab27884dca700 https://www.encodeproject.org/files/ENCFF982TZK/@@download/ENCFF982TZK.bigBed hg19 released ENCFF100SGJ fastq reads ENCSR795IYP ChIP-seq EFO:0002067 K562 cell line Homo sapiens JUNB-human ENCAB000BQG DNA False 2016-03-02 ENCODE 1 1 50 single-ended 1546790653 Richard Myers, HAIB 298f825295fcec7de481afb182a90441 SRA:SRR5339320 https://www.encodeproject.org/files/ENCFF100SGJ/@@download/ENCFF100SGJ.fastq.gz Illumina HiSeq 2000 /files/ENCFF001RVO/ released borderline replicate concordance, low read depth, antibody characterized with exemption ENCFF821MJN fastq reads ENCSR795IYP ChIP-seq EFO:0002067 K562 cell line Homo sapiens JUNB-human ENCAB000BQG DNA False 2016-03-02 ENCODE 2 1 50 single-ended 1186717752 Richard Myers, HAIB 404c266467c42448ce5252f8f669b34f SRA:SRR5339319 https://www.encodeproject.org/files/ENCFF821MJN/@@download/ENCFF821MJN.fastq.gz Illumina HiSeq 2000 /files/ENCFF913JVQ/ released borderline replicate concordance, low read depth, antibody characterized with exemption ENCFF889JSZ bam alignments ENCSR795IYP ChIP-seq EFO:0002067 K562 cell line Homo sapiens JUNB-human ENCAB000BQG DNA False 2016-03-02 ENCODE 1 ENCFF100SGJ, ENCFF807MUK 1270080293 ENCODE Processing Pipeline b7ba1221d69865414ce4d8a84e7e6993 https://www.encodeproject.org/files/ENCFF889JSZ/@@download/ENCFF889JSZ.bam hg19 released borderline replicate concordance, low read depth, antibody characterized with exemption ENCFF193ALV bam alignments ENCSR795IYP ChIP-seq EFO:0002067 K562 cell line Homo sapiens JUNB-human ENCAB000BQG DNA False 2016-03-02 ENCODE 2 ENCFF807MUK, ENCFF821MJN 935800845 ENCODE Processing Pipeline b6d267b7a4d3cc10a23cda6eb91cecc0 https://www.encodeproject.org/files/ENCFF193ALV/@@download/ENCFF193ALV.bam hg19 released borderline replicate concordance, low read depth, antibody characterized with exemption ENCFF227WDE bigWig signal p-value ENCSR795IYP ChIP-seq EFO:0002067 K562 cell line Homo sapiens JUNB-human ENCAB000BQG DNA False 2016-03-02 ENCODE 1, 2 ENCFF061QOJ, ENCFF095BVD, ENCFF444TNY, ENCFF709WYV 1243004184 ENCODE Processing Pipeline 2c50fe58b2f5ff8807db659277a27d21 https://www.encodeproject.org/files/ENCFF227WDE/@@download/ENCFF227WDE.bigWig hg19 released borderline replicate concordance, low read depth, antibody characterized with exemption ENCFF511DBK bigWig fold change over control ENCSR795IYP ChIP-seq EFO:0002067 K562 cell line Homo sapiens JUNB-human ENCAB000BQG DNA False 2016-03-02 ENCODE 1, 2 ENCFF061QOJ, ENCFF095BVD, ENCFF444TNY, ENCFF709WYV 1162467224 ENCODE Processing Pipeline 066faeb51bada5d4dececabecbdda61a https://www.encodeproject.org/files/ENCFF511DBK/@@download/ENCFF511DBK.bigWig hg19 released borderline replicate concordance, low read depth, antibody characterized with exemption ENCFF610YQQ bam unfiltered alignments ENCSR795IYP ChIP-seq EFO:0002067 K562 cell line Homo sapiens JUNB-human ENCAB000BQG DNA False 2016-03-02 ENCODE 1 50 ENCFF100SGJ, ENCFF643CGH 1666388255 ENCODE Processing Pipeline 95a79814b865500d67388f92bea8eb92 https://www.encodeproject.org/files/ENCFF610YQQ/@@download/ENCFF610YQQ.bam GRCh38 released borderline replicate concordance, low read depth, antibody characterized with exemption ENCFF921PES bam unfiltered alignments ENCSR795IYP ChIP-seq EFO:0002067 K562 cell line Homo sapiens JUNB-human ENCAB000BQG DNA False 2016-03-02 ENCODE 2 50 ENCFF643CGH, ENCFF821MJN 1281209292 ENCODE Processing Pipeline cfac68a8a19bc7d27a07fc12c97a91c0 https://www.encodeproject.org/files/ENCFF921PES/@@download/ENCFF921PES.bam GRCh38 released borderline replicate concordance, low read depth, antibody characterized with exemption ENCFF512YJL bam alignments ENCSR795IYP ChIP-seq EFO:0002067 K562 cell line Homo sapiens JUNB-human ENCAB000BQG DNA False 2016-03-02 ENCODE 1 50 ENCFF100SGJ, ENCFF643CGH 1269599344 ENCODE Processing Pipeline af7a13a094cbfc65d61861c8592d4ce2 https://www.encodeproject.org/files/ENCFF512YJL/@@download/ENCFF512YJL.bam GRCh38 released borderline replicate concordance, low read depth, antibody characterized with exemption ENCFF090SFR bam alignments ENCSR795IYP ChIP-seq EFO:0002067 K562 cell line Homo sapiens JUNB-human ENCAB000BQG DNA False 2016-03-02 ENCODE 2 50 ENCFF643CGH, ENCFF821MJN 935341586 ENCODE Processing Pipeline 5b5bc93902c434023216b2e1d7183707 https://www.encodeproject.org/files/ENCFF090SFR/@@download/ENCFF090SFR.bam GRCh38 released borderline replicate concordance, low read depth, antibody characterized with exemption ENCFF357LSR bigWig signal p-value ENCSR795IYP ChIP-seq EFO:0002067 K562 cell line Homo sapiens JUNB-human ENCAB000BQG DNA False 2016-03-02 ENCODE 1 ENCFF332SVJ, ENCFF512YJL 750080504 ENCODE Processing Pipeline f07e4f18b13224212ade3646186e3c74 https://www.encodeproject.org/files/ENCFF357LSR/@@download/ENCFF357LSR.bigWig GRCh38 released borderline replicate concordance, low read depth, antibody characterized with exemption ENCFF726ECH bigWig signal p-value ENCSR795IYP ChIP-seq EFO:0002067 K562 cell line Homo sapiens JUNB-human ENCAB000BQG DNA False 2016-03-02 ENCODE 2 ENCFF090SFR, ENCFF162ZOO 639782931 ENCODE Processing Pipeline 97be04a52d6b96b1b43ceb6ac357d0a9 https://www.encodeproject.org/files/ENCFF726ECH/@@download/ENCFF726ECH.bigWig GRCh38 released borderline replicate concordance, low read depth, antibody characterized with exemption ENCFF248DQQ bigWig signal p-value ENCSR795IYP ChIP-seq EFO:0002067 K562 cell line Homo sapiens JUNB-human ENCAB000BQG DNA False 2016-03-02 ENCODE 1, 2 ENCFF090SFR, ENCFF162ZOO, ENCFF332SVJ, ENCFF512YJL 1346948777 ENCODE Processing Pipeline de0cabd609e841b44980a9358a10b873 https://www.encodeproject.org/files/ENCFF248DQQ/@@download/ENCFF248DQQ.bigWig GRCh38 released borderline replicate concordance, low read depth, antibody characterized with exemption ENCFF656EDK bigWig fold change over control ENCSR795IYP ChIP-seq EFO:0002067 K562 cell line Homo sapiens JUNB-human ENCAB000BQG DNA False 2016-03-02 ENCODE 1 ENCFF332SVJ, ENCFF512YJL 592001584 ENCODE Processing Pipeline 0fd9b463db909f30b094ae284202c63c https://www.encodeproject.org/files/ENCFF656EDK/@@download/ENCFF656EDK.bigWig GRCh38 released borderline replicate concordance, low read depth, antibody characterized with exemption ENCFF956ZZP bigWig fold change over control ENCSR795IYP ChIP-seq EFO:0002067 K562 cell line Homo sapiens JUNB-human ENCAB000BQG DNA False 2016-03-02 ENCODE 2 ENCFF090SFR, ENCFF162ZOO 454917758 ENCODE Processing Pipeline 883617aa522a5a4e6d0a9d6a9cd3ceba https://www.encodeproject.org/files/ENCFF956ZZP/@@download/ENCFF956ZZP.bigWig GRCh38 released borderline replicate concordance, low read depth, antibody characterized with exemption ENCFF694DDU bigWig fold change over control ENCSR795IYP ChIP-seq EFO:0002067 K562 cell line Homo sapiens JUNB-human ENCAB000BQG DNA False 2016-03-02 ENCODE 1, 2 ENCFF090SFR, ENCFF162ZOO, ENCFF332SVJ, ENCFF512YJL 1157982636 ENCODE Processing Pipeline 7fa9a19f242307aff00937625e23a6b7 https://www.encodeproject.org/files/ENCFF694DDU/@@download/ENCFF694DDU.bigWig GRCh38 released borderline replicate concordance, low read depth, antibody characterized with exemption ENCFF867NYH bed narrowPeak peaks ENCSR795IYP ChIP-seq EFO:0002067 K562 cell line Homo sapiens JUNB-human ENCAB000BQG DNA False 2016-03-02 ENCODE 1, 2 ENCFF090SFR, ENCFF162ZOO, ENCFF332SVJ, ENCFF512YJL 6694469 ENCODE Processing Pipeline 4443b2f52359735db8559ae5077158e0 https://www.encodeproject.org/files/ENCFF867NYH/@@download/ENCFF867NYH.bed.gz GRCh38 released borderline replicate concordance, low read depth, antibody characterized with exemption ENCFF823FMJ bigBed narrowPeak peaks ENCSR795IYP ChIP-seq EFO:0002067 K562 cell line Homo sapiens JUNB-human ENCAB000BQG DNA False 2016-03-02 ENCODE 1 ENCFF736LSP 11199060 ENCODE Processing Pipeline 979bf518c0f732ed92271ecb824690a6 https://www.encodeproject.org/files/ENCFF823FMJ/@@download/ENCFF823FMJ.bigBed GRCh38 released borderline replicate concordance, low read depth, antibody characterized with exemption ENCFF883ODA bigBed narrowPeak peaks ENCSR795IYP ChIP-seq EFO:0002067 K562 cell line Homo sapiens JUNB-human ENCAB000BQG DNA False 2016-03-02 ENCODE 1, 2 ENCFF867NYH 13454735 ENCODE Processing Pipeline 02bbc011d1667b4493927a3165083b48 https://www.encodeproject.org/files/ENCFF883ODA/@@download/ENCFF883ODA.bigBed GRCh38 released borderline replicate concordance, low read depth, antibody characterized with exemption ENCFF529CTW bed narrowPeak conservative idr thresholded peaks ENCSR795IYP ChIP-seq EFO:0002067 K562 cell line Homo sapiens JUNB-human ENCAB000BQG DNA False 2016-03-02 ENCODE 1, 2 ENCFF419RSJ, ENCFF736LSP, ENCFF867NYH, ENCFF953QWL 59369 ENCODE Processing Pipeline f559647127a153384e1d0729e29ada42 https://www.encodeproject.org/files/ENCFF529CTW/@@download/ENCFF529CTW.bed.gz GRCh38 released borderline replicate concordance, low read depth, antibody characterized with exemption ENCFF736LSP bed narrowPeak peaks ENCSR795IYP ChIP-seq EFO:0002067 K562 cell line Homo sapiens JUNB-human ENCAB000BQG DNA False 2016-03-02 ENCODE 1 ENCFF332SVJ, ENCFF512YJL 5584155 ENCODE Processing Pipeline 5a0a61ede9d89286e74f9a63e52525c6 https://www.encodeproject.org/files/ENCFF736LSP/@@download/ENCFF736LSP.bed.gz GRCh38 released borderline replicate concordance, low read depth, antibody characterized with exemption ENCFF953QWL bed narrowPeak peaks ENCSR795IYP ChIP-seq EFO:0002067 K562 cell line Homo sapiens JUNB-human ENCAB000BQG DNA False 2016-03-02 ENCODE 2 ENCFF090SFR, ENCFF162ZOO 5515829 ENCODE Processing Pipeline a6559f06dba3b2a1a7967c0b4a061391 https://www.encodeproject.org/files/ENCFF953QWL/@@download/ENCFF953QWL.bed.gz GRCh38 released borderline replicate concordance, low read depth, antibody characterized with exemption ENCFF382HOA bigBed narrowPeak peaks ENCSR795IYP ChIP-seq EFO:0002067 K562 cell line Homo sapiens JUNB-human ENCAB000BQG DNA False 2016-03-02 ENCODE 2 ENCFF953QWL 13292286 ENCODE Processing Pipeline c0e8880f4ec651fc817fcb45862acf0d https://www.encodeproject.org/files/ENCFF382HOA/@@download/ENCFF382HOA.bigBed GRCh38 released borderline replicate concordance, low read depth, antibody characterized with exemption ENCFF123BAT bigBed narrowPeak conservative idr thresholded peaks ENCSR795IYP ChIP-seq EFO:0002067 K562 cell line Homo sapiens JUNB-human ENCAB000BQG DNA False 2016-03-02 ENCODE 1, 2 ENCFF529CTW 152155 ENCODE Processing Pipeline a3b38fdb4b6a4cf9236546426a70f067 https://www.encodeproject.org/files/ENCFF123BAT/@@download/ENCFF123BAT.bigBed GRCh38 released borderline replicate concordance, low read depth, antibody characterized with exemption ENCFF739XTO bed narrowPeak optimal idr thresholded peaks ENCSR795IYP ChIP-seq EFO:0002067 K562 cell line Homo sapiens JUNB-human ENCAB000BQG DNA False 2016-03-02 ENCODE 1, 2 ENCFF419RSJ, ENCFF736LSP, ENCFF867NYH, ENCFF953QWL 92277 ENCODE Processing Pipeline 6a857de42db30576df96a5224a3d56b8 https://www.encodeproject.org/files/ENCFF739XTO/@@download/ENCFF739XTO.bed.gz GRCh38 released borderline replicate concordance, low read depth, antibody characterized with exemption ENCFF521NPG bigBed narrowPeak optimal idr thresholded peaks ENCSR795IYP ChIP-seq EFO:0002067 K562 cell line Homo sapiens JUNB-human ENCAB000BQG DNA False 2016-03-02 ENCODE 1, 2 ENCFF739XTO 238627 ENCODE Processing Pipeline 8bd98c30b2d23236869bddb101dd3a2c https://www.encodeproject.org/files/ENCFF521NPG/@@download/ENCFF521NPG.bigBed GRCh38 released borderline replicate concordance, low read depth, antibody characterized with exemption ENCFF337DCW bam unfiltered alignments ENCSR795IYP ChIP-seq EFO:0002067 K562 cell line Homo sapiens JUNB-human ENCAB000BQG DNA False 2016-03-02 ENCODE 1 50 ENCFF100SGJ, ENCFF807MUK 1662727921 ENCODE Processing Pipeline 8496922bc56221a4c2aa458b9fbc667c https://www.encodeproject.org/files/ENCFF337DCW/@@download/ENCFF337DCW.bam hg19 released borderline replicate concordance, low read depth, antibody characterized with exemption ENCFF394DYO bam unfiltered alignments ENCSR795IYP ChIP-seq EFO:0002067 K562 cell line Homo sapiens JUNB-human ENCAB000BQG DNA False 2016-03-02 ENCODE 2 50 ENCFF807MUK, ENCFF821MJN 1277189234 ENCODE Processing Pipeline 7a2552505f86daddd44fbc94e096bef9 https://www.encodeproject.org/files/ENCFF394DYO/@@download/ENCFF394DYO.bam hg19 released borderline replicate concordance, low read depth, antibody characterized with exemption ENCFF709WYV bam alignments ENCSR795IYP ChIP-seq EFO:0002067 K562 cell line Homo sapiens JUNB-human ENCAB000BQG DNA False 2016-03-02 ENCODE 2 50 ENCFF807MUK, ENCFF821MJN 935800873 ENCODE Processing Pipeline bfbe82c03beea28731796ebbef77ea27 https://www.encodeproject.org/files/ENCFF709WYV/@@download/ENCFF709WYV.bam hg19 released borderline replicate concordance, low read depth, antibody characterized with exemption ENCFF095BVD bam alignments ENCSR795IYP ChIP-seq EFO:0002067 K562 cell line Homo sapiens JUNB-human ENCAB000BQG DNA False 2016-03-02 ENCODE 1 50 ENCFF100SGJ, ENCFF807MUK 1270080323 ENCODE Processing Pipeline d942c8de90f3447fa116ba07c8071eaa https://www.encodeproject.org/files/ENCFF095BVD/@@download/ENCFF095BVD.bam hg19 released borderline replicate concordance, low read depth, antibody characterized with exemption ENCFF269XNA bigWig fold change over control ENCSR795IYP ChIP-seq EFO:0002067 K562 cell line Homo sapiens JUNB-human ENCAB000BQG DNA False 2016-03-02 ENCODE 1 ENCFF061QOJ, ENCFF095BVD 603917166 ENCODE Processing Pipeline 29253956a0b148f013da763c8dfa0958 https://www.encodeproject.org/files/ENCFF269XNA/@@download/ENCFF269XNA.bigWig hg19 released borderline replicate concordance, low read depth, antibody characterized with exemption ENCFF997SXB bed narrowPeak peaks ENCSR795IYP ChIP-seq EFO:0002067 K562 cell line Homo sapiens JUNB-human ENCAB000BQG DNA False 2016-03-02 ENCODE 1 ENCFF061QOJ, ENCFF095BVD 5589037 ENCODE Processing Pipeline decbba0f1d48cd087724ff92cac4575c https://www.encodeproject.org/files/ENCFF997SXB/@@download/ENCFF997SXB.bed.gz hg19 released borderline replicate concordance, low read depth, antibody characterized with exemption ENCFF325KGM bed narrowPeak peaks ENCSR795IYP ChIP-seq EFO:0002067 K562 cell line Homo sapiens JUNB-human ENCAB000BQG DNA False 2016-03-02 ENCODE 1, 2 ENCFF061QOJ, ENCFF095BVD, ENCFF444TNY, ENCFF709WYV 6693331 ENCODE Processing Pipeline 8426882f9c1e9f96649011903ff68939 https://www.encodeproject.org/files/ENCFF325KGM/@@download/ENCFF325KGM.bed.gz hg19 released borderline replicate concordance, low read depth, antibody characterized with exemption ENCFF267VFV bigBed narrowPeak peaks ENCSR795IYP ChIP-seq EFO:0002067 K562 cell line Homo sapiens JUNB-human ENCAB000BQG DNA False 2016-03-02 ENCODE 1 ENCFF997SXB 11195455 ENCODE Processing Pipeline b5e49fa03f0ee1947f77e1119c74ca44 https://www.encodeproject.org/files/ENCFF267VFV/@@download/ENCFF267VFV.bigBed hg19 released borderline replicate concordance, low read depth, antibody characterized with exemption ENCFF127XOZ bed narrowPeak peaks ENCSR795IYP ChIP-seq EFO:0002067 K562 cell line Homo sapiens JUNB-human ENCAB000BQG DNA False 2016-03-02 ENCODE 2 ENCFF444TNY, ENCFF709WYV 5234413 ENCODE Processing Pipeline 2540b3700f187069edc19cf750478f22 https://www.encodeproject.org/files/ENCFF127XOZ/@@download/ENCFF127XOZ.bed.gz hg19 released borderline replicate concordance, low read depth, antibody characterized with exemption ENCFF687TKV bigBed narrowPeak conservative idr thresholded peaks ENCSR795IYP ChIP-seq EFO:0002067 K562 cell line Homo sapiens JUNB-human ENCAB000BQG DNA False 2016-03-02 ENCODE 1, 2 ENCFF209OUI 150782 ENCODE Processing Pipeline 0099b0118ab442e371675e53ee89fa3f https://www.encodeproject.org/files/ENCFF687TKV/@@download/ENCFF687TKV.bigBed hg19 released borderline replicate concordance, low read depth, antibody characterized with exemption ENCFF316GIH bigWig signal p-value ENCSR795IYP ChIP-seq EFO:0002067 K562 cell line Homo sapiens JUNB-human ENCAB000BQG DNA False 2016-03-02 ENCODE 1 ENCFF061QOJ, ENCFF095BVD 851354104 ENCODE Processing Pipeline 56bbd96e26eebfc14baffdd1f2aa0b08 https://www.encodeproject.org/files/ENCFF316GIH/@@download/ENCFF316GIH.bigWig hg19 released borderline replicate concordance, low read depth, antibody characterized with exemption ENCFF051BIA bigWig fold change over control ENCSR795IYP ChIP-seq EFO:0002067 K562 cell line Homo sapiens JUNB-human ENCAB000BQG DNA False 2016-03-02 ENCODE 2 ENCFF444TNY, ENCFF709WYV 420026095 ENCODE Processing Pipeline 86c7ad4048a32ab7ac6541b063e2d2b5 https://www.encodeproject.org/files/ENCFF051BIA/@@download/ENCFF051BIA.bigWig hg19 released borderline replicate concordance, low read depth, antibody characterized with exemption ENCFF568VQS bigBed narrowPeak peaks ENCSR795IYP ChIP-seq EFO:0002067 K562 cell line Homo sapiens JUNB-human ENCAB000BQG DNA False 2016-03-02 ENCODE 2 ENCFF127XOZ 13211674 ENCODE Processing Pipeline 4177a56cb224a764fe3c6165b932152b https://www.encodeproject.org/files/ENCFF568VQS/@@download/ENCFF568VQS.bigBed hg19 released borderline replicate concordance, low read depth, antibody characterized with exemption ENCFF368FRQ bigBed narrowPeak peaks ENCSR795IYP ChIP-seq EFO:0002067 K562 cell line Homo sapiens JUNB-human ENCAB000BQG DNA False 2016-03-02 ENCODE 1, 2 ENCFF325KGM 13441918 ENCODE Processing Pipeline a2e3e42059607c3e3d65b5256420b06d https://www.encodeproject.org/files/ENCFF368FRQ/@@download/ENCFF368FRQ.bigBed hg19 released borderline replicate concordance, low read depth, antibody characterized with exemption ENCFF209OUI bed narrowPeak conservative idr thresholded peaks ENCSR795IYP ChIP-seq EFO:0002067 K562 cell line Homo sapiens JUNB-human ENCAB000BQG DNA False 2016-03-02 ENCODE 1, 2 ENCFF001TDO, ENCFF127XOZ, ENCFF325KGM, ENCFF997SXB 59020 ENCODE Processing Pipeline 5ab02af87b3770c3fb0b0d8b956220e9 https://www.encodeproject.org/files/ENCFF209OUI/@@download/ENCFF209OUI.bed.gz hg19 released borderline replicate concordance, low read depth, antibody characterized with exemption ENCFF491ERB bigBed narrowPeak optimal idr thresholded peaks ENCSR795IYP ChIP-seq EFO:0002067 K562 cell line Homo sapiens JUNB-human ENCAB000BQG DNA False 2016-03-02 ENCODE 1, 2 ENCFF426DUB 241770 ENCODE Processing Pipeline 10616fb9d5417123934677f1cd8be1b2 https://www.encodeproject.org/files/ENCFF491ERB/@@download/ENCFF491ERB.bigBed hg19 released borderline replicate concordance, low read depth, antibody characterized with exemption ENCFF604ULO bigWig signal p-value ENCSR795IYP ChIP-seq EFO:0002067 K562 cell line Homo sapiens JUNB-human ENCAB000BQG DNA False 2016-03-02 ENCODE 2 ENCFF444TNY, ENCFF709WYV 568843484 ENCODE Processing Pipeline 4e509084d389c2323cbf08880677b9fe https://www.encodeproject.org/files/ENCFF604ULO/@@download/ENCFF604ULO.bigWig hg19 released borderline replicate concordance, low read depth, antibody characterized with exemption ENCFF426DUB bed narrowPeak optimal idr thresholded peaks ENCSR795IYP ChIP-seq EFO:0002067 K562 cell line Homo sapiens JUNB-human ENCAB000BQG DNA False 2016-03-02 ENCODE 1, 2 ENCFF001TDO, ENCFF127XOZ, ENCFF325KGM, ENCFF997SXB 95173 ENCODE Processing Pipeline 9f0888598e4c0a94620276153bf94d46 https://www.encodeproject.org/files/ENCFF426DUB/@@download/ENCFF426DUB.bed.gz hg19 released borderline replicate concordance, low read depth, antibody characterized with exemption ENCFF280ZEV bam unfiltered alignments ENCSR494UQJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR3C1-human ENCAB221RKB DNA False 2018-01-26 ENCODE 1 100 ENCFF349XHH, ENCFF807MUK, ENCFF998XOV 4770001631 ENCODE Processing Pipeline bd5251bb66a893197b76e0170f62b9fa https://www.encodeproject.org/files/ENCFF280ZEV/@@download/ENCFF280ZEV.bam hg19 released borderline replicate concordance, low read depth experiment not submitted to GEO partially characterized antibody ENCFF069RAV bam unfiltered alignments ENCSR494UQJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR3C1-human ENCAB221RKB DNA False 2018-01-26 ENCODE 2 100 ENCFF195DWB, ENCFF703FVJ, ENCFF807MUK 5591222609 ENCODE Processing Pipeline 5a89a72f511bb9fb2e3dfddac5330dbe https://www.encodeproject.org/files/ENCFF069RAV/@@download/ENCFF069RAV.bam hg19 released borderline replicate concordance, low read depth experiment not submitted to GEO partially characterized antibody ENCFF998XOV fastq reads ENCSR494UQJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR3C1-human ENCAB221RKB DNA False 2018-01-26 ENCODE 1 1 100 paired-ended 2 ENCFF349XHH 2208697032 Michael Snyder, Stanford f86e74c7ccb734e729e1f3ebe81bff85 https://www.encodeproject.org/files/ENCFF998XOV/@@download/ENCFF998XOV.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFH/ released borderline replicate concordance, low read depth experiment not submitted to GEO partially characterized antibody ENCFF349XHH fastq reads ENCSR494UQJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR3C1-human ENCAB221RKB DNA False 2018-01-26 ENCODE 1 1 100 paired-ended 1 ENCFF998XOV 2142564149 Michael Snyder, Stanford 22c4c5494b804e497af1710809de7bff https://www.encodeproject.org/files/ENCFF349XHH/@@download/ENCFF349XHH.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFF/ released borderline replicate concordance, low read depth experiment not submitted to GEO partially characterized antibody ENCFF703FVJ fastq reads ENCSR494UQJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR3C1-human ENCAB221RKB DNA False 2018-01-26 ENCODE 2 1 100 paired-ended 1 ENCFF195DWB 2528782094 Michael Snyder, Stanford eabb084c855420a98e9f4d300cbb962e https://www.encodeproject.org/files/ENCFF703FVJ/@@download/ENCFF703FVJ.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFD/ released borderline replicate concordance, low read depth experiment not submitted to GEO partially characterized antibody ENCFF195DWB fastq reads ENCSR494UQJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR3C1-human ENCAB221RKB DNA False 2018-01-26 ENCODE 2 1 100 paired-ended 2 ENCFF703FVJ 2605360683 Michael Snyder, Stanford aae31d5908879fafca597fe606c93f6c https://www.encodeproject.org/files/ENCFF195DWB/@@download/ENCFF195DWB.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFA/ released borderline replicate concordance, low read depth experiment not submitted to GEO partially characterized antibody ENCFF298RPP bam alignments ENCSR494UQJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR3C1-human ENCAB221RKB DNA False 2018-01-26 ENCODE 1 100 ENCFF349XHH, ENCFF807MUK, ENCFF998XOV 3568892989 ENCODE Processing Pipeline bb5c10aedf32596116d87b0e229a89e3 https://www.encodeproject.org/files/ENCFF298RPP/@@download/ENCFF298RPP.bam hg19 released borderline replicate concordance, low read depth experiment not submitted to GEO partially characterized antibody ENCFF695INR bam alignments ENCSR494UQJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR3C1-human ENCAB221RKB DNA False 2018-01-26 ENCODE 2 100 ENCFF195DWB, ENCFF703FVJ, ENCFF807MUK 4259733582 ENCODE Processing Pipeline 37985f249c9d73034ad12ced822324d7 https://www.encodeproject.org/files/ENCFF695INR/@@download/ENCFF695INR.bam hg19 released borderline replicate concordance, low read depth experiment not submitted to GEO partially characterized antibody ENCFF076ZYV bigWig signal p-value ENCSR494UQJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR3C1-human ENCAB221RKB DNA False 2018-01-26 ENCODE 1 ENCFF298RPP, ENCFF581ZJL 921076293 ENCODE Processing Pipeline 0f160b8bddf037bd5c737a2eaf95f954 https://www.encodeproject.org/files/ENCFF076ZYV/@@download/ENCFF076ZYV.bigWig hg19 released borderline replicate concordance, low read depth experiment not submitted to GEO partially characterized antibody ENCFF482YDW bigWig signal p-value ENCSR494UQJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR3C1-human ENCAB221RKB DNA False 2018-01-26 ENCODE 2 ENCFF051LWI, ENCFF695INR 1089540641 ENCODE Processing Pipeline 6bcf2d4191a0b3154df96a0574e0284b https://www.encodeproject.org/files/ENCFF482YDW/@@download/ENCFF482YDW.bigWig hg19 released borderline replicate concordance, low read depth experiment not submitted to GEO partially characterized antibody ENCFF247DIC bigWig signal p-value ENCSR494UQJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR3C1-human ENCAB221RKB DNA False 2018-01-26 ENCODE 1, 2 ENCFF051LWI, ENCFF298RPP, ENCFF581ZJL, ENCFF695INR 1948336999 ENCODE Processing Pipeline 6fdb4f8c448bbf7f7d3dc0716d86eb2d https://www.encodeproject.org/files/ENCFF247DIC/@@download/ENCFF247DIC.bigWig hg19 released borderline replicate concordance, low read depth experiment not submitted to GEO partially characterized antibody ENCFF224NCR bigWig fold change over control ENCSR494UQJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR3C1-human ENCAB221RKB DNA False 2018-01-26 ENCODE 1 ENCFF298RPP, ENCFF581ZJL 1054183780 ENCODE Processing Pipeline ac59b19f55550a31ed3abc56a74a325b https://www.encodeproject.org/files/ENCFF224NCR/@@download/ENCFF224NCR.bigWig hg19 released borderline replicate concordance, low read depth experiment not submitted to GEO partially characterized antibody ENCFF180CCM bigWig fold change over control ENCSR494UQJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR3C1-human ENCAB221RKB DNA False 2018-01-26 ENCODE 2 ENCFF051LWI, ENCFF695INR 1112137682 ENCODE Processing Pipeline 426050a6aaabf117811f937a32ca607a https://www.encodeproject.org/files/ENCFF180CCM/@@download/ENCFF180CCM.bigWig hg19 released borderline replicate concordance, low read depth experiment not submitted to GEO partially characterized antibody ENCFF868UXP bigWig fold change over control ENCSR494UQJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR3C1-human ENCAB221RKB DNA False 2018-01-26 ENCODE 1, 2 ENCFF051LWI, ENCFF298RPP, ENCFF581ZJL, ENCFF695INR 2009870110 ENCODE Processing Pipeline 48563b937d20c8d795542e492b3568a2 https://www.encodeproject.org/files/ENCFF868UXP/@@download/ENCFF868UXP.bigWig hg19 released borderline replicate concordance, low read depth experiment not submitted to GEO partially characterized antibody ENCFF923WYM bed narrowPeak peaks ENCSR494UQJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR3C1-human ENCAB221RKB DNA False 2018-01-26 ENCODE 1, 2 ENCFF051LWI, ENCFF298RPP, ENCFF581ZJL, ENCFF695INR 7143082 ENCODE Processing Pipeline fe318886d2865030fc712f4595cbadea https://www.encodeproject.org/files/ENCFF923WYM/@@download/ENCFF923WYM.bed.gz hg19 released borderline replicate concordance, low read depth experiment not submitted to GEO partially characterized antibody ENCFF939VKQ bed narrowPeak peaks ENCSR494UQJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR3C1-human ENCAB221RKB DNA False 2018-01-26 ENCODE 1 ENCFF298RPP, ENCFF581ZJL 6452652 ENCODE Processing Pipeline 99eb1c6a796e6f18b5c580fbceb21067 https://www.encodeproject.org/files/ENCFF939VKQ/@@download/ENCFF939VKQ.bed.gz hg19 released borderline replicate concordance, low read depth experiment not submitted to GEO partially characterized antibody ENCFF269CZZ bed narrowPeak peaks ENCSR494UQJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR3C1-human ENCAB221RKB DNA False 2018-01-26 ENCODE 2 ENCFF051LWI, ENCFF695INR 6536831 ENCODE Processing Pipeline eb59420ac468be2b23c240c9cce56837 https://www.encodeproject.org/files/ENCFF269CZZ/@@download/ENCFF269CZZ.bed.gz hg19 released borderline replicate concordance, low read depth experiment not submitted to GEO partially characterized antibody ENCFF734STL bigBed narrowPeak peaks ENCSR494UQJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR3C1-human ENCAB221RKB DNA False 2018-01-26 ENCODE 1 ENCFF939VKQ 13316614 ENCODE Processing Pipeline 42bef5867d974014c8eda4ae83a4d8c1 https://www.encodeproject.org/files/ENCFF734STL/@@download/ENCFF734STL.bigBed hg19 released borderline replicate concordance, low read depth experiment not submitted to GEO partially characterized antibody ENCFF276UFW bigBed narrowPeak peaks ENCSR494UQJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR3C1-human ENCAB221RKB DNA False 2018-01-26 ENCODE 2 ENCFF269CZZ 11096778 ENCODE Processing Pipeline 7bc5a589ba2211e3291cbbcd451cd9a3 https://www.encodeproject.org/files/ENCFF276UFW/@@download/ENCFF276UFW.bigBed hg19 released borderline replicate concordance, low read depth experiment not submitted to GEO partially characterized antibody ENCFF015PGL bigBed narrowPeak peaks ENCSR494UQJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR3C1-human ENCAB221RKB DNA False 2018-01-26 ENCODE 1, 2 ENCFF923WYM 13131133 ENCODE Processing Pipeline b184fbded71064352dcf4eaa7ff2538a https://www.encodeproject.org/files/ENCFF015PGL/@@download/ENCFF015PGL.bigBed hg19 released borderline replicate concordance, low read depth experiment not submitted to GEO partially characterized antibody ENCFF583CIY bed narrowPeak optimal idr thresholded peaks ENCSR494UQJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR3C1-human ENCAB221RKB DNA False 2018-01-26 ENCODE 1, 2 ENCFF001TDO, ENCFF269CZZ, ENCFF923WYM, ENCFF939VKQ 73618 ENCODE Processing Pipeline fab8230df4fac667f59e49a65da4daab https://www.encodeproject.org/files/ENCFF583CIY/@@download/ENCFF583CIY.bed.gz hg19 released borderline replicate concordance, low read depth experiment not submitted to GEO partially characterized antibody ENCFF091PDT bed narrowPeak conservative idr thresholded peaks ENCSR494UQJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR3C1-human ENCAB221RKB DNA False 2018-01-26 ENCODE 1, 2 ENCFF001TDO, ENCFF269CZZ, ENCFF923WYM, ENCFF939VKQ 31175 ENCODE Processing Pipeline 761b6f3fee2318cdcfd0559d4dbe503a https://www.encodeproject.org/files/ENCFF091PDT/@@download/ENCFF091PDT.bed.gz hg19 released borderline replicate concordance, low read depth experiment not submitted to GEO partially characterized antibody ENCFF920ZAF bigBed narrowPeak conservative idr thresholded peaks ENCSR494UQJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR3C1-human ENCAB221RKB DNA False 2018-01-26 ENCODE 1, 2 ENCFF091PDT 116581 ENCODE Processing Pipeline 1229c6c7f8c0d35e68efc74845a59eb4 https://www.encodeproject.org/files/ENCFF920ZAF/@@download/ENCFF920ZAF.bigBed hg19 released borderline replicate concordance, low read depth experiment not submitted to GEO partially characterized antibody ENCFF215IMW bigBed narrowPeak optimal idr thresholded peaks ENCSR494UQJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR3C1-human ENCAB221RKB DNA False 2018-01-26 ENCODE 1, 2 ENCFF583CIY 186578 ENCODE Processing Pipeline 48d5771014001770a5c9b48ebec20cfe https://www.encodeproject.org/files/ENCFF215IMW/@@download/ENCFF215IMW.bigBed hg19 released borderline replicate concordance, low read depth experiment not submitted to GEO partially characterized antibody ENCFF919WAX bam unfiltered alignments ENCSR494UQJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR3C1-human ENCAB221RKB DNA False 2018-01-26 ENCODE 2 100 ENCFF195DWB, ENCFF643CGH, ENCFF703FVJ 5594185862 ENCODE Processing Pipeline 9ccc010fa7aef7c93acd929c2738f2a6 https://www.encodeproject.org/files/ENCFF919WAX/@@download/ENCFF919WAX.bam GRCh38 released borderline replicate concordance, low read depth experiment not submitted to GEO partially characterized antibody ENCFF060FAH bam unfiltered alignments ENCSR494UQJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR3C1-human ENCAB221RKB DNA False 2018-01-26 ENCODE 1 100 ENCFF349XHH, ENCFF643CGH, ENCFF998XOV 4772462332 ENCODE Processing Pipeline 794d2b8ca590b9df4d1da952e3630d8a https://www.encodeproject.org/files/ENCFF060FAH/@@download/ENCFF060FAH.bam GRCh38 released borderline replicate concordance, low read depth experiment not submitted to GEO partially characterized antibody ENCFF768DLZ bam alignments ENCSR494UQJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR3C1-human ENCAB221RKB DNA False 2018-01-26 ENCODE 1 100 ENCFF349XHH, ENCFF643CGH, ENCFF998XOV 3571417175 ENCODE Processing Pipeline c3231b5c8049ac300374dc13ab7df112 https://www.encodeproject.org/files/ENCFF768DLZ/@@download/ENCFF768DLZ.bam GRCh38 released borderline replicate concordance, low read depth experiment not submitted to GEO partially characterized antibody ENCFF887EIG bam alignments ENCSR494UQJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR3C1-human ENCAB221RKB DNA False 2018-01-26 ENCODE 2 100 ENCFF195DWB, ENCFF643CGH, ENCFF703FVJ 4262652048 ENCODE Processing Pipeline cc7abe497aab54594c366b8a04834d62 https://www.encodeproject.org/files/ENCFF887EIG/@@download/ENCFF887EIG.bam GRCh38 released borderline replicate concordance, low read depth experiment not submitted to GEO partially characterized antibody ENCFF553OIV bigWig signal p-value ENCSR494UQJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR3C1-human ENCAB221RKB DNA False 2018-01-26 ENCODE 1 ENCFF768DLZ, ENCFF910IKB 930281523 ENCODE Processing Pipeline 80e36596b8db0298681894762e1ab663 https://www.encodeproject.org/files/ENCFF553OIV/@@download/ENCFF553OIV.bigWig GRCh38 released borderline replicate concordance, low read depth experiment not submitted to GEO partially characterized antibody ENCFF239GVW bigWig signal p-value ENCSR494UQJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR3C1-human ENCAB221RKB DNA False 2018-01-26 ENCODE 2 ENCFF227IZS, ENCFF887EIG 1145636008 ENCODE Processing Pipeline c205a634a11c86bf4a57a3630c181256 https://www.encodeproject.org/files/ENCFF239GVW/@@download/ENCFF239GVW.bigWig GRCh38 released borderline replicate concordance, low read depth experiment not submitted to GEO partially characterized antibody ENCFF551LBC bigWig signal p-value ENCSR494UQJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR3C1-human ENCAB221RKB DNA False 2018-01-26 ENCODE 1, 2 ENCFF227IZS, ENCFF768DLZ, ENCFF887EIG, ENCFF910IKB 1583741763 ENCODE Processing Pipeline 26b9e01a71556cb249ef13fe4a278b33 https://www.encodeproject.org/files/ENCFF551LBC/@@download/ENCFF551LBC.bigWig GRCh38 released borderline replicate concordance, low read depth experiment not submitted to GEO partially characterized antibody ENCFF567AOI bigWig fold change over control ENCSR494UQJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR3C1-human ENCAB221RKB DNA False 2018-01-26 ENCODE 1 ENCFF768DLZ, ENCFF910IKB 1060002033 ENCODE Processing Pipeline 3e98b7dc5c24000ca113d87f234d64e8 https://www.encodeproject.org/files/ENCFF567AOI/@@download/ENCFF567AOI.bigWig GRCh38 released borderline replicate concordance, low read depth experiment not submitted to GEO partially characterized antibody ENCFF024UHZ bigWig fold change over control ENCSR494UQJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR3C1-human ENCAB221RKB DNA False 2018-01-26 ENCODE 2 ENCFF227IZS, ENCFF887EIG 1117187638 ENCODE Processing Pipeline 33fe637e7f399a60c4308d79239dd916 https://www.encodeproject.org/files/ENCFF024UHZ/@@download/ENCFF024UHZ.bigWig GRCh38 released borderline replicate concordance, low read depth experiment not submitted to GEO partially characterized antibody ENCFF532SLM bigWig fold change over control ENCSR494UQJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR3C1-human ENCAB221RKB DNA False 2018-01-26 ENCODE 1, 2 ENCFF227IZS, ENCFF768DLZ, ENCFF887EIG, ENCFF910IKB 1986103028 ENCODE Processing Pipeline 8f6a0132d3825901ec4d6321bde6c657 https://www.encodeproject.org/files/ENCFF532SLM/@@download/ENCFF532SLM.bigWig GRCh38 released borderline replicate concordance, low read depth experiment not submitted to GEO partially characterized antibody ENCFF722QUS bed narrowPeak peaks ENCSR494UQJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR3C1-human ENCAB221RKB DNA False 2018-01-26 ENCODE 1 ENCFF768DLZ, ENCFF910IKB 6350866 ENCODE Processing Pipeline c5c340d75c5905e940a5ecd3cd86f42d https://www.encodeproject.org/files/ENCFF722QUS/@@download/ENCFF722QUS.bed.gz GRCh38 released borderline replicate concordance, low read depth experiment not submitted to GEO partially characterized antibody ENCFF042IUA bed narrowPeak peaks ENCSR494UQJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR3C1-human ENCAB221RKB DNA False 2018-01-26 ENCODE 2 ENCFF227IZS, ENCFF887EIG 6383641 ENCODE Processing Pipeline 93acae56f072c13b0ad26545cba6880d https://www.encodeproject.org/files/ENCFF042IUA/@@download/ENCFF042IUA.bed.gz GRCh38 released borderline replicate concordance, low read depth experiment not submitted to GEO partially characterized antibody ENCFF041RZO bed narrowPeak peaks ENCSR494UQJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR3C1-human ENCAB221RKB DNA False 2018-01-26 ENCODE 1, 2 ENCFF227IZS, ENCFF768DLZ, ENCFF887EIG, ENCFF910IKB 7105988 ENCODE Processing Pipeline 898a7ba3a0f866145e3ea74e331cea48 https://www.encodeproject.org/files/ENCFF041RZO/@@download/ENCFF041RZO.bed.gz GRCh38 released borderline replicate concordance, low read depth experiment not submitted to GEO partially characterized antibody ENCFF547VVP bigBed narrowPeak peaks ENCSR494UQJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR3C1-human ENCAB221RKB DNA False 2018-01-26 ENCODE 1 ENCFF722QUS 13320911 ENCODE Processing Pipeline 28ab0f5b66b4348916aa77ab57bc84eb https://www.encodeproject.org/files/ENCFF547VVP/@@download/ENCFF547VVP.bigBed GRCh38 released borderline replicate concordance, low read depth experiment not submitted to GEO partially characterized antibody ENCFF939DWO bigBed narrowPeak peaks ENCSR494UQJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR3C1-human ENCAB221RKB DNA False 2018-01-26 ENCODE 2 ENCFF042IUA 11103696 ENCODE Processing Pipeline 6e1f68d20091e3342c0391f874fd7f45 https://www.encodeproject.org/files/ENCFF939DWO/@@download/ENCFF939DWO.bigBed GRCh38 released borderline replicate concordance, low read depth experiment not submitted to GEO partially characterized antibody ENCFF744NSR bigBed narrowPeak peaks ENCSR494UQJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR3C1-human ENCAB221RKB DNA False 2018-01-26 ENCODE 1, 2 ENCFF041RZO 13140609 ENCODE Processing Pipeline 3f433c36cdf4e21a8fe34d4534c07ca2 https://www.encodeproject.org/files/ENCFF744NSR/@@download/ENCFF744NSR.bigBed GRCh38 released borderline replicate concordance, low read depth experiment not submitted to GEO partially characterized antibody ENCFF162TOM bed narrowPeak conservative idr thresholded peaks ENCSR494UQJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR3C1-human ENCAB221RKB DNA False 2018-01-26 ENCODE 1, 2 ENCFF041RZO, ENCFF042IUA, ENCFF419RSJ, ENCFF722QUS 30544 ENCODE Processing Pipeline d37855016be4d70db96e0870e78e6c06 https://www.encodeproject.org/files/ENCFF162TOM/@@download/ENCFF162TOM.bed.gz GRCh38 released borderline replicate concordance, low read depth experiment not submitted to GEO partially characterized antibody ENCFF563UXY bigBed narrowPeak conservative idr thresholded peaks ENCSR494UQJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR3C1-human ENCAB221RKB DNA False 2018-01-26 ENCODE 1, 2 ENCFF162TOM 116669 ENCODE Processing Pipeline e71ded26ee474c656922d474a13cab07 https://www.encodeproject.org/files/ENCFF563UXY/@@download/ENCFF563UXY.bigBed GRCh38 released borderline replicate concordance, low read depth experiment not submitted to GEO partially characterized antibody ENCFF821YMC bed narrowPeak optimal idr thresholded peaks ENCSR494UQJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR3C1-human ENCAB221RKB DNA False 2018-01-26 ENCODE 1, 2 ENCFF041RZO, ENCFF042IUA, ENCFF419RSJ, ENCFF722QUS 74160 ENCODE Processing Pipeline c9c4220e59a9e0a0b0d9bae6f4b9f840 https://www.encodeproject.org/files/ENCFF821YMC/@@download/ENCFF821YMC.bed.gz GRCh38 released borderline replicate concordance, low read depth experiment not submitted to GEO partially characterized antibody ENCFF533DTY bigBed narrowPeak optimal idr thresholded peaks ENCSR494UQJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR3C1-human ENCAB221RKB DNA False 2018-01-26 ENCODE 1, 2 ENCFF821YMC 187995 ENCODE Processing Pipeline 48e30cfeebf7a4c0c8b5eb49fc587486 https://www.encodeproject.org/files/ENCFF533DTY/@@download/ENCFF533DTY.bigBed GRCh38 released borderline replicate concordance, low read depth experiment not submitted to GEO partially characterized antibody ENCFF999VUF fastq reads ENCSR581CVA ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPH1-human ENCAB000AVT DNA SDS formaldehyde False 2017-12-01 ENCODE 1 1 40 single-ended 726731061 Xiang-Dong Fu, UCSD 4f7bb954d3d18a1c90edcad584eac300 https://www.encodeproject.org/files/ENCFF999VUF/@@download/ENCFF999VUF.fastq.gz Illumina HiSeq 2500 /files/ENCFF025UQF/ released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity experiment not submitted to GEO ENCFF753OYD fastq reads ENCSR581CVA ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPH1-human ENCAB000AVT DNA SDS formaldehyde False 2017-12-01 ENCODE 2 1 40 single-ended 824050518 Xiang-Dong Fu, UCSD 733834bf859f0ddd2650eddb640c75e8 https://www.encodeproject.org/files/ENCFF753OYD/@@download/ENCFF753OYD.fastq.gz Illumina HiSeq 2500 /files/ENCFF201ZVH/ released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity experiment not submitted to GEO ENCFF791DFG bam unfiltered alignments ENCSR581CVA ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPH1-human ENCAB000AVT DNA SDS formaldehyde False 2017-12-01 ENCODE 1 40 ENCFF807MUK, ENCFF999VUF 914414822 ENCODE Processing Pipeline ce51ddb72c8b2f01048ebdb8d954472a https://www.encodeproject.org/files/ENCFF791DFG/@@download/ENCFF791DFG.bam hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity experiment not submitted to GEO ENCFF594IKC bam alignments ENCSR581CVA ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPH1-human ENCAB000AVT DNA SDS formaldehyde False 2017-12-01 ENCODE 1 40 ENCFF807MUK, ENCFF999VUF 501564193 ENCODE Processing Pipeline 65a1c84412f2255d5e03eeedada58074 https://www.encodeproject.org/files/ENCFF594IKC/@@download/ENCFF594IKC.bam hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity experiment not submitted to GEO ENCFF904WUN bam unfiltered alignments ENCSR581CVA ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPH1-human ENCAB000AVT DNA SDS formaldehyde False 2017-12-01 ENCODE 1 40 ENCFF643CGH, ENCFF999VUF 917748961 ENCODE Processing Pipeline 6667580a9b82483fc163bb763776fe5f https://www.encodeproject.org/files/ENCFF904WUN/@@download/ENCFF904WUN.bam GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity experiment not submitted to GEO ENCFF510PCF bam unfiltered alignments ENCSR581CVA ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPH1-human ENCAB000AVT DNA SDS formaldehyde False 2017-12-01 ENCODE 2 40 ENCFF753OYD, ENCFF807MUK 1029154001 ENCODE Processing Pipeline 384343859ab8fad0389389f6581bd295 https://www.encodeproject.org/files/ENCFF510PCF/@@download/ENCFF510PCF.bam hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity experiment not submitted to GEO ENCFF658SGW bam alignments ENCSR581CVA ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPH1-human ENCAB000AVT DNA SDS formaldehyde False 2017-12-01 ENCODE 1 40 ENCFF643CGH, ENCFF999VUF 501025320 ENCODE Processing Pipeline 434842bc7b61d77ae7f7e5bb34f159cb https://www.encodeproject.org/files/ENCFF658SGW/@@download/ENCFF658SGW.bam GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity experiment not submitted to GEO ENCFF870AMF bam alignments ENCSR581CVA ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPH1-human ENCAB000AVT DNA SDS formaldehyde False 2017-12-01 ENCODE 2 40 ENCFF753OYD, ENCFF807MUK 551254873 ENCODE Processing Pipeline 405cf588abfaa5efa1b5dc776d808bae https://www.encodeproject.org/files/ENCFF870AMF/@@download/ENCFF870AMF.bam hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity experiment not submitted to GEO ENCFF278POV bam alignments ENCSR581CVA ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPH1-human ENCAB000AVT DNA SDS formaldehyde False 2017-12-01 ENCODE 2 40 ENCFF643CGH, ENCFF753OYD 550703548 ENCODE Processing Pipeline c44b2405357b640c6a9a5873ea1369ca https://www.encodeproject.org/files/ENCFF278POV/@@download/ENCFF278POV.bam GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity experiment not submitted to GEO ENCFF826IAO bam unfiltered alignments ENCSR581CVA ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPH1-human ENCAB000AVT DNA SDS formaldehyde False 2017-12-01 ENCODE 2 40 ENCFF643CGH, ENCFF753OYD 1033459422 ENCODE Processing Pipeline 45e478d5a9f19aed868cc15820823d70 https://www.encodeproject.org/files/ENCFF826IAO/@@download/ENCFF826IAO.bam GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity experiment not submitted to GEO ENCFF351HSM bed narrowPeak peaks ENCSR581CVA ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPH1-human ENCAB000AVT DNA SDS formaldehyde False 2017-12-01 ENCODE 1 ENCFF477SGV, ENCFF594IKC 5428885 ENCODE Processing Pipeline a7fd826f7392e09bc6263c84edd354dc https://www.encodeproject.org/files/ENCFF351HSM/@@download/ENCFF351HSM.bed.gz hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity experiment not submitted to GEO ENCFF568TTD bigBed narrowPeak peaks ENCSR581CVA ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPH1-human ENCAB000AVT DNA SDS formaldehyde False 2017-12-01 ENCODE 2 ENCFF706ONY 13097170 ENCODE Processing Pipeline ab75db427c5578315c33d190430e510a https://www.encodeproject.org/files/ENCFF568TTD/@@download/ENCFF568TTD.bigBed hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity experiment not submitted to GEO ENCFF856WBX bigWig fold change over control ENCSR581CVA ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPH1-human ENCAB000AVT DNA SDS formaldehyde False 2017-12-01 ENCODE 1 ENCFF477SGV, ENCFF594IKC 313639074 ENCODE Processing Pipeline 4769b9286612d7c6b71ec5d5f6ab2f13 https://www.encodeproject.org/files/ENCFF856WBX/@@download/ENCFF856WBX.bigWig hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity experiment not submitted to GEO ENCFF706ONY bed narrowPeak peaks ENCSR581CVA ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPH1-human ENCAB000AVT DNA SDS formaldehyde False 2017-12-01 ENCODE 2 ENCFF705ZEH, ENCFF870AMF 5478238 ENCODE Processing Pipeline 022d8a2670228f69d1e6f043311b001e https://www.encodeproject.org/files/ENCFF706ONY/@@download/ENCFF706ONY.bed.gz hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity experiment not submitted to GEO ENCFF325SFZ bed narrowPeak conservative idr thresholded peaks ENCSR581CVA ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPH1-human ENCAB000AVT DNA SDS formaldehyde False 2017-12-01 ENCODE 1, 2 ENCFF001TDO, ENCFF253KPM, ENCFF351HSM, ENCFF706ONY 5341 ENCODE Processing Pipeline 65bfc34b644f852d6cf86edaec4fbf98 https://www.encodeproject.org/files/ENCFF325SFZ/@@download/ENCFF325SFZ.bed.gz hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity experiment not submitted to GEO ENCFF292JRY bed narrowPeak optimal idr thresholded peaks ENCSR581CVA ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPH1-human ENCAB000AVT DNA SDS formaldehyde False 2017-12-01 ENCODE 1, 2 ENCFF001TDO, ENCFF253KPM, ENCFF351HSM, ENCFF706ONY 6299 ENCODE Processing Pipeline 97f2c8d1d04eee8ffadd48bb50e8f670 https://www.encodeproject.org/files/ENCFF292JRY/@@download/ENCFF292JRY.bed.gz hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity experiment not submitted to GEO ENCFF254PLU bigWig signal p-value ENCSR581CVA ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPH1-human ENCAB000AVT DNA SDS formaldehyde False 2017-12-01 ENCODE 1 ENCFF477SGV, ENCFF594IKC 385363122 ENCODE Processing Pipeline 6b2faaf3c01039e6e2d1249ccdd25bd4 https://www.encodeproject.org/files/ENCFF254PLU/@@download/ENCFF254PLU.bigWig hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity experiment not submitted to GEO ENCFF133JFO bigWig signal p-value ENCSR581CVA ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPH1-human ENCAB000AVT DNA SDS formaldehyde False 2017-12-01 ENCODE 2 ENCFF705ZEH, ENCFF870AMF 412540017 ENCODE Processing Pipeline 6e998ce744ff997d76ca4d329562cf89 https://www.encodeproject.org/files/ENCFF133JFO/@@download/ENCFF133JFO.bigWig hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity experiment not submitted to GEO ENCFF666JWH bigBed narrowPeak peaks ENCSR581CVA ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPH1-human ENCAB000AVT DNA SDS formaldehyde False 2017-12-01 ENCODE 1, 2 ENCFF253KPM 13252155 ENCODE Processing Pipeline 74a2ba1605b9ba4927abeed514ab55ed https://www.encodeproject.org/files/ENCFF666JWH/@@download/ENCFF666JWH.bigBed hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity experiment not submitted to GEO ENCFF238AUB bigWig signal p-value ENCSR581CVA ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPH1-human ENCAB000AVT DNA SDS formaldehyde False 2017-12-01 ENCODE 1, 2 ENCFF477SGV, ENCFF594IKC, ENCFF705ZEH, ENCFF870AMF 703964966 ENCODE Processing Pipeline 6cbb388fa61a47cc69dfd8831a65842a https://www.encodeproject.org/files/ENCFF238AUB/@@download/ENCFF238AUB.bigWig hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity experiment not submitted to GEO ENCFF578VSR bigWig fold change over control ENCSR581CVA ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPH1-human ENCAB000AVT DNA SDS formaldehyde False 2017-12-01 ENCODE 2 ENCFF705ZEH, ENCFF870AMF 315489242 ENCODE Processing Pipeline aebe422325b93a5a7d0e6fd806dc146c https://www.encodeproject.org/files/ENCFF578VSR/@@download/ENCFF578VSR.bigWig hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity experiment not submitted to GEO ENCFF424LYB bigWig fold change over control ENCSR581CVA ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPH1-human ENCAB000AVT DNA SDS formaldehyde False 2017-12-01 ENCODE 1, 2 ENCFF477SGV, ENCFF594IKC, ENCFF705ZEH, ENCFF870AMF 690741757 ENCODE Processing Pipeline ee6d58d1e2158d1cd5f4a9e5710389d3 https://www.encodeproject.org/files/ENCFF424LYB/@@download/ENCFF424LYB.bigWig hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity experiment not submitted to GEO ENCFF253KPM bed narrowPeak peaks ENCSR581CVA ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPH1-human ENCAB000AVT DNA SDS formaldehyde False 2017-12-01 ENCODE 1, 2 ENCFF477SGV, ENCFF594IKC, ENCFF705ZEH, ENCFF870AMF 6661099 ENCODE Processing Pipeline fa73763851765d75c1c4095a95481d2a https://www.encodeproject.org/files/ENCFF253KPM/@@download/ENCFF253KPM.bed.gz hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity experiment not submitted to GEO ENCFF339BWX bigBed narrowPeak peaks ENCSR581CVA ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPH1-human ENCAB000AVT DNA SDS formaldehyde False 2017-12-01 ENCODE 1 ENCFF351HSM 13090422 ENCODE Processing Pipeline 709bf3c9e8a827de02adb6443e9c23d7 https://www.encodeproject.org/files/ENCFF339BWX/@@download/ENCFF339BWX.bigBed hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity experiment not submitted to GEO ENCFF968BHS bigBed narrowPeak conservative idr thresholded peaks ENCSR581CVA ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPH1-human ENCAB000AVT DNA SDS formaldehyde False 2017-12-01 ENCODE 1, 2 ENCFF325SFZ 93413 ENCODE Processing Pipeline d629d56643bb0d23a4757765d7a495e1 https://www.encodeproject.org/files/ENCFF968BHS/@@download/ENCFF968BHS.bigBed hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity experiment not submitted to GEO ENCFF674SSL bigBed narrowPeak optimal idr thresholded peaks ENCSR581CVA ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPH1-human ENCAB000AVT DNA SDS formaldehyde False 2017-12-01 ENCODE 1, 2 ENCFF292JRY 96979 ENCODE Processing Pipeline 2951b0afa2bbef9cd337f0a022582632 https://www.encodeproject.org/files/ENCFF674SSL/@@download/ENCFF674SSL.bigBed hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity experiment not submitted to GEO ENCFF478CZF bigWig fold change over control ENCSR581CVA ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPH1-human ENCAB000AVT DNA SDS formaldehyde False 2017-12-01 ENCODE 1 ENCFF308PSW, ENCFF658SGW 297562091 ENCODE Processing Pipeline 43b0d8d33f468bbbd209cfb83e7af9f1 https://www.encodeproject.org/files/ENCFF478CZF/@@download/ENCFF478CZF.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity experiment not submitted to GEO ENCFF859JWK bigWig signal p-value ENCSR581CVA ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPH1-human ENCAB000AVT DNA SDS formaldehyde False 2017-12-01 ENCODE 2 ENCFF198JCQ, ENCFF278POV 413327751 ENCODE Processing Pipeline 65597de38b7999f8002314c6c016bd8c https://www.encodeproject.org/files/ENCFF859JWK/@@download/ENCFF859JWK.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity experiment not submitted to GEO ENCFF541UDD bigWig fold change over control ENCSR581CVA ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPH1-human ENCAB000AVT DNA SDS formaldehyde False 2017-12-01 ENCODE 2 ENCFF198JCQ, ENCFF278POV 315442017 ENCODE Processing Pipeline e25afdb002c556340d3caf69e862b8e8 https://www.encodeproject.org/files/ENCFF541UDD/@@download/ENCFF541UDD.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity experiment not submitted to GEO ENCFF953NCJ bigWig signal p-value ENCSR581CVA ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPH1-human ENCAB000AVT DNA SDS formaldehyde False 2017-12-01 ENCODE 1, 2 ENCFF198JCQ, ENCFF278POV, ENCFF308PSW, ENCFF658SGW 774525557 ENCODE Processing Pipeline a08c0c80ab4f82745546b2bcf0c850f2 https://www.encodeproject.org/files/ENCFF953NCJ/@@download/ENCFF953NCJ.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity experiment not submitted to GEO ENCFF489LOZ bigWig signal p-value ENCSR581CVA ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPH1-human ENCAB000AVT DNA SDS formaldehyde False 2017-12-01 ENCODE 1 ENCFF308PSW, ENCFF658SGW 442823769 ENCODE Processing Pipeline bb957cae3b6e66e55b7e5d864cb9ab0c https://www.encodeproject.org/files/ENCFF489LOZ/@@download/ENCFF489LOZ.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity experiment not submitted to GEO ENCFF081ACP bed narrowPeak peaks ENCSR581CVA ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPH1-human ENCAB000AVT DNA SDS formaldehyde False 2017-12-01 ENCODE 1 ENCFF308PSW, ENCFF658SGW 5338305 ENCODE Processing Pipeline bd9559f58f024fe68bfc56e42e1883b2 https://www.encodeproject.org/files/ENCFF081ACP/@@download/ENCFF081ACP.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity experiment not submitted to GEO ENCFF413RAW bigBed narrowPeak conservative idr thresholded peaks ENCSR581CVA ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPH1-human ENCAB000AVT DNA SDS formaldehyde False 2017-12-01 ENCODE 1, 2 ENCFF920ETU 96909 ENCODE Processing Pipeline f75f1d807000ab6e8b43246168c0117e https://www.encodeproject.org/files/ENCFF413RAW/@@download/ENCFF413RAW.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity experiment not submitted to GEO ENCFF844QFF bed narrowPeak optimal idr thresholded peaks ENCSR581CVA ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPH1-human ENCAB000AVT DNA SDS formaldehyde False 2017-12-01 ENCODE 1, 2 ENCFF081ACP, ENCFF419RSJ, ENCFF782XJI, ENCFF808QGE 6512 ENCODE Processing Pipeline 8dc20f0543a8aac6dd4f4ee582d0a74e https://www.encodeproject.org/files/ENCFF844QFF/@@download/ENCFF844QFF.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity experiment not submitted to GEO ENCFF142BIO bigBed narrowPeak peaks ENCSR581CVA ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPH1-human ENCAB000AVT DNA SDS formaldehyde False 2017-12-01 ENCODE 2 ENCFF782XJI 13114926 ENCODE Processing Pipeline 18a683d65478ee2f95149987284d1507 https://www.encodeproject.org/files/ENCFF142BIO/@@download/ENCFF142BIO.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity experiment not submitted to GEO ENCFF452ULT bigWig fold change over control ENCSR581CVA ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPH1-human ENCAB000AVT DNA SDS formaldehyde False 2017-12-01 ENCODE 1, 2 ENCFF198JCQ, ENCFF278POV, ENCFF308PSW, ENCFF658SGW 690178553 ENCODE Processing Pipeline 35d860b0e7649e312e00575df59d2e80 https://www.encodeproject.org/files/ENCFF452ULT/@@download/ENCFF452ULT.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity experiment not submitted to GEO ENCFF808QGE bed narrowPeak peaks ENCSR581CVA ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPH1-human ENCAB000AVT DNA SDS formaldehyde False 2017-12-01 ENCODE 1, 2 ENCFF198JCQ, ENCFF278POV, ENCFF308PSW, ENCFF658SGW 6562899 ENCODE Processing Pipeline 337e9be3e4864946d231a4f40b2b8640 https://www.encodeproject.org/files/ENCFF808QGE/@@download/ENCFF808QGE.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity experiment not submitted to GEO ENCFF920ETU bed narrowPeak conservative idr thresholded peaks ENCSR581CVA ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPH1-human ENCAB000AVT DNA SDS formaldehyde False 2017-12-01 ENCODE 1, 2 ENCFF081ACP, ENCFF419RSJ, ENCFF782XJI, ENCFF808QGE 6194 ENCODE Processing Pipeline 6b246d329f86049569269f5320ab6937 https://www.encodeproject.org/files/ENCFF920ETU/@@download/ENCFF920ETU.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity experiment not submitted to GEO ENCFF782XJI bed narrowPeak peaks ENCSR581CVA ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPH1-human ENCAB000AVT DNA SDS formaldehyde False 2017-12-01 ENCODE 2 ENCFF198JCQ, ENCFF278POV 5364225 ENCODE Processing Pipeline 8b2104ce03a85afd3dfa8ed9cc04cc20 https://www.encodeproject.org/files/ENCFF782XJI/@@download/ENCFF782XJI.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity experiment not submitted to GEO ENCFF580QSY bigBed narrowPeak peaks ENCSR581CVA ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPH1-human ENCAB000AVT DNA SDS formaldehyde False 2017-12-01 ENCODE 1 ENCFF081ACP 13123218 ENCODE Processing Pipeline 9869f4cd5bc4557752b86bcc9665d057 https://www.encodeproject.org/files/ENCFF580QSY/@@download/ENCFF580QSY.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity experiment not submitted to GEO ENCFF845COV bigBed narrowPeak peaks ENCSR581CVA ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPH1-human ENCAB000AVT DNA SDS formaldehyde False 2017-12-01 ENCODE 1, 2 ENCFF808QGE 13281579 ENCODE Processing Pipeline de58992c2fcbbcf5c7e1a4f6f4c8067f https://www.encodeproject.org/files/ENCFF845COV/@@download/ENCFF845COV.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity experiment not submitted to GEO ENCFF115QJK bigBed narrowPeak optimal idr thresholded peaks ENCSR581CVA ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPH1-human ENCAB000AVT DNA SDS formaldehyde False 2017-12-01 ENCODE 1, 2 ENCFF844QFF 98326 ENCODE Processing Pipeline 6bf89725182a388ed332e4df72b324f9 https://www.encodeproject.org/files/ENCFF115QJK/@@download/ENCFF115QJK.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity experiment not submitted to GEO ENCFF823MZR bam unfiltered alignments ENCSR530XQI ChIP-seq EFO:0002067 K562 cell line Homo sapiens L3MBTL2-human ENCAB000BMG DNA False 2016-06-23 ENCODE 1 100 ENCFF139CLF, ENCFF807MUK, ENCFF945QMW 7165164076 ENCODE Processing Pipeline 4e7c31265d597f90038946553664336c https://www.encodeproject.org/files/ENCFF823MZR/@@download/ENCFF823MZR.bam hg19 released mild to moderate bottlenecking, moderate library complexity ENCFF751OZR bam unfiltered alignments ENCSR530XQI ChIP-seq EFO:0002067 K562 cell line Homo sapiens L3MBTL2-human ENCAB000BMG DNA False 2016-06-23 ENCODE 2 100 ENCFF347VNR, ENCFF756MPL, ENCFF807MUK 6425336716 ENCODE Processing Pipeline 5cb7ab51d3a1b13746e9f020e54678f0 https://www.encodeproject.org/files/ENCFF751OZR/@@download/ENCFF751OZR.bam hg19 released mild to moderate bottlenecking, moderate library complexity ENCFF945QMW fastq reads ENCSR530XQI ChIP-seq EFO:0002067 K562 cell line Homo sapiens L3MBTL2-human ENCAB000BMG DNA False 2016-06-23 ENCODE 1 1 100 paired-ended 1 ENCFF139CLF 3460433604 Michael Snyder, Stanford 92d620c9872131a9a03031948321ec1a SRA:SRR5111829 https://www.encodeproject.org/files/ENCFF945QMW/@@download/ENCFF945QMW.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFF/ released mild to moderate bottlenecking, moderate library complexity ENCFF756MPL fastq reads ENCSR530XQI ChIP-seq EFO:0002067 K562 cell line Homo sapiens L3MBTL2-human ENCAB000BMG DNA False 2016-06-23 ENCODE 2 1 100 paired-ended 1 ENCFF347VNR 3112604909 Michael Snyder, Stanford ece84c65e608ebf31cee9958e09a7ae5 SRA:SRR5111828 https://www.encodeproject.org/files/ENCFF756MPL/@@download/ENCFF756MPL.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFD/ released mild to moderate bottlenecking, moderate library complexity ENCFF139CLF fastq reads ENCSR530XQI ChIP-seq EFO:0002067 K562 cell line Homo sapiens L3MBTL2-human ENCAB000BMG DNA False 2016-06-23 ENCODE 1 1 100 paired-ended 2 ENCFF945QMW 3447442845 Michael Snyder, Stanford ee78560fdede19be09c8596d195de772 SRA:SRR5111829 https://www.encodeproject.org/files/ENCFF139CLF/@@download/ENCFF139CLF.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFH/ released mild to moderate bottlenecking, moderate library complexity ENCFF347VNR fastq reads ENCSR530XQI ChIP-seq EFO:0002067 K562 cell line Homo sapiens L3MBTL2-human ENCAB000BMG DNA False 2016-06-23 ENCODE 2 1 100 paired-ended 2 ENCFF756MPL 3113566723 Michael Snyder, Stanford 7a355c06c87004de60d5ada6b0ee7245 SRA:SRR5111828 https://www.encodeproject.org/files/ENCFF347VNR/@@download/ENCFF347VNR.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFA/ released mild to moderate bottlenecking, moderate library complexity ENCFF767TZS bam alignments ENCSR530XQI ChIP-seq EFO:0002067 K562 cell line Homo sapiens L3MBTL2-human ENCAB000BMG DNA False 2016-06-23 ENCODE 2 100 ENCFF347VNR, ENCFF756MPL, ENCFF807MUK 4874021482 ENCODE Processing Pipeline 72f070a4c5927a5a251df263cc4aa6ce https://www.encodeproject.org/files/ENCFF767TZS/@@download/ENCFF767TZS.bam hg19 released mild to moderate bottlenecking, moderate library complexity ENCFF011MCR bam alignments ENCSR530XQI ChIP-seq EFO:0002067 K562 cell line Homo sapiens L3MBTL2-human ENCAB000BMG DNA False 2016-06-23 ENCODE 1 100 ENCFF139CLF, ENCFF807MUK, ENCFF945QMW 5428997410 ENCODE Processing Pipeline b97fed0de7f8a91458e40d253bd4a82d https://www.encodeproject.org/files/ENCFF011MCR/@@download/ENCFF011MCR.bam hg19 released mild to moderate bottlenecking, moderate library complexity ENCFF587FKZ bam unfiltered alignments ENCSR530XQI ChIP-seq EFO:0002067 K562 cell line Homo sapiens L3MBTL2-human ENCAB000BMG DNA False 2016-06-23 ENCODE 2 100 ENCFF347VNR, ENCFF643CGH, ENCFF756MPL 6428483909 ENCODE Processing Pipeline 0fed56b421cd2b7f4e41edb07512edc3 https://www.encodeproject.org/files/ENCFF587FKZ/@@download/ENCFF587FKZ.bam GRCh38 released mild to moderate bottlenecking, moderate library complexity ENCFF704JZA bam unfiltered alignments ENCSR530XQI ChIP-seq EFO:0002067 K562 cell line Homo sapiens L3MBTL2-human ENCAB000BMG DNA False 2016-06-23 ENCODE 1 100 ENCFF139CLF, ENCFF643CGH, ENCFF945QMW 7169433210 ENCODE Processing Pipeline 1f537c041404f2892be9b34e6cd2f5c1 https://www.encodeproject.org/files/ENCFF704JZA/@@download/ENCFF704JZA.bam GRCh38 released mild to moderate bottlenecking, moderate library complexity ENCFF799FNR bam alignments ENCSR530XQI ChIP-seq EFO:0002067 K562 cell line Homo sapiens L3MBTL2-human ENCAB000BMG DNA False 2016-06-23 ENCODE 2 100 ENCFF347VNR, ENCFF643CGH, ENCFF756MPL 4876520938 ENCODE Processing Pipeline 615733282c87655a82cc6797e26079bf https://www.encodeproject.org/files/ENCFF799FNR/@@download/ENCFF799FNR.bam GRCh38 released mild to moderate bottlenecking, moderate library complexity ENCFF856TBD bam alignments ENCSR530XQI ChIP-seq EFO:0002067 K562 cell line Homo sapiens L3MBTL2-human ENCAB000BMG DNA False 2016-06-23 ENCODE 1 100 ENCFF139CLF, ENCFF643CGH, ENCFF945QMW 5431077726 ENCODE Processing Pipeline 0f96ab1f2249e5dd4c0cbf35abeea77d https://www.encodeproject.org/files/ENCFF856TBD/@@download/ENCFF856TBD.bam GRCh38 released mild to moderate bottlenecking, moderate library complexity ENCFF778MRQ bigWig signal p-value ENCSR530XQI ChIP-seq EFO:0002067 K562 cell line Homo sapiens L3MBTL2-human ENCAB000BMG DNA False 2016-06-23 ENCODE 1 ENCFF856TBD, ENCFF910IKB 1292168320 ENCODE Processing Pipeline c09bdcd985aff4e9d375ccaab3095f67 https://www.encodeproject.org/files/ENCFF778MRQ/@@download/ENCFF778MRQ.bigWig GRCh38 released mild to moderate bottlenecking, moderate library complexity ENCFF905FXL bigWig signal p-value ENCSR530XQI ChIP-seq EFO:0002067 K562 cell line Homo sapiens L3MBTL2-human ENCAB000BMG DNA False 2016-06-23 ENCODE 2 ENCFF227IZS, ENCFF799FNR 1051032117 ENCODE Processing Pipeline 18e5d3e5bf0e1c19220fb62f8ffd6f51 https://www.encodeproject.org/files/ENCFF905FXL/@@download/ENCFF905FXL.bigWig GRCh38 released mild to moderate bottlenecking, moderate library complexity ENCFF654MFK bigWig signal p-value ENCSR530XQI ChIP-seq EFO:0002067 K562 cell line Homo sapiens L3MBTL2-human ENCAB000BMG DNA False 2016-06-23 ENCODE 1, 2 ENCFF227IZS, ENCFF799FNR, ENCFF856TBD, ENCFF910IKB 1863410853 ENCODE Processing Pipeline a09c99b24013847382139580915c64b2 https://www.encodeproject.org/files/ENCFF654MFK/@@download/ENCFF654MFK.bigWig GRCh38 released mild to moderate bottlenecking, moderate library complexity ENCFF355ROT bigWig fold change over control ENCSR530XQI ChIP-seq EFO:0002067 K562 cell line Homo sapiens L3MBTL2-human ENCAB000BMG DNA False 2016-06-23 ENCODE 1 ENCFF856TBD, ENCFF910IKB 1385407471 ENCODE Processing Pipeline 5a97c9de861b21eedec9b921d578670b https://www.encodeproject.org/files/ENCFF355ROT/@@download/ENCFF355ROT.bigWig GRCh38 released mild to moderate bottlenecking, moderate library complexity ENCFF192KAR bigWig fold change over control ENCSR530XQI ChIP-seq EFO:0002067 K562 cell line Homo sapiens L3MBTL2-human ENCAB000BMG DNA False 2016-06-23 ENCODE 2 ENCFF227IZS, ENCFF799FNR 1183104144 ENCODE Processing Pipeline c6bd435821dbbe37b43fe49816ede2ae https://www.encodeproject.org/files/ENCFF192KAR/@@download/ENCFF192KAR.bigWig GRCh38 released mild to moderate bottlenecking, moderate library complexity ENCFF194DSG bigWig fold change over control ENCSR530XQI ChIP-seq EFO:0002067 K562 cell line Homo sapiens L3MBTL2-human ENCAB000BMG DNA False 2016-06-23 ENCODE 1, 2 ENCFF227IZS, ENCFF799FNR, ENCFF856TBD, ENCFF910IKB 2230682876 ENCODE Processing Pipeline d1867f695da43747f05e81c4e34652a7 https://www.encodeproject.org/files/ENCFF194DSG/@@download/ENCFF194DSG.bigWig GRCh38 released mild to moderate bottlenecking, moderate library complexity ENCFF579YKA bed narrowPeak peaks ENCSR530XQI ChIP-seq EFO:0002067 K562 cell line Homo sapiens L3MBTL2-human ENCAB000BMG DNA False 2016-06-23 ENCODE 1 ENCFF856TBD, ENCFF910IKB 7161401 ENCODE Processing Pipeline a60372d54cb372c01713f0b394c2a9bf https://www.encodeproject.org/files/ENCFF579YKA/@@download/ENCFF579YKA.bed.gz GRCh38 released mild to moderate bottlenecking, moderate library complexity ENCFF019FWB bed narrowPeak peaks ENCSR530XQI ChIP-seq EFO:0002067 K562 cell line Homo sapiens L3MBTL2-human ENCAB000BMG DNA False 2016-06-23 ENCODE 2 ENCFF227IZS, ENCFF799FNR 7104401 ENCODE Processing Pipeline 69a5dbdc97d345ebba1768aa6b5c8c66 https://www.encodeproject.org/files/ENCFF019FWB/@@download/ENCFF019FWB.bed.gz GRCh38 released mild to moderate bottlenecking, moderate library complexity ENCFF458SHG bed narrowPeak peaks ENCSR530XQI ChIP-seq EFO:0002067 K562 cell line Homo sapiens L3MBTL2-human ENCAB000BMG DNA False 2016-06-23 ENCODE 1, 2 ENCFF227IZS, ENCFF799FNR, ENCFF856TBD, ENCFF910IKB 7196613 ENCODE Processing Pipeline a38c8e65f2b5a2e84a025a362b85c425 https://www.encodeproject.org/files/ENCFF458SHG/@@download/ENCFF458SHG.bed.gz GRCh38 released mild to moderate bottlenecking, moderate library complexity ENCFF848QJP bigBed narrowPeak peaks ENCSR530XQI ChIP-seq EFO:0002067 K562 cell line Homo sapiens L3MBTL2-human ENCAB000BMG DNA False 2016-06-23 ENCODE 1 ENCFF579YKA 13102889 ENCODE Processing Pipeline ba0d16b9e7c4393a7d736494628d2cca https://www.encodeproject.org/files/ENCFF848QJP/@@download/ENCFF848QJP.bigBed GRCh38 released mild to moderate bottlenecking, moderate library complexity ENCFF605CSQ bigBed narrowPeak peaks ENCSR530XQI ChIP-seq EFO:0002067 K562 cell line Homo sapiens L3MBTL2-human ENCAB000BMG DNA False 2016-06-23 ENCODE 2 ENCFF019FWB 12931899 ENCODE Processing Pipeline 60a7af3654ae80365134e754c862f648 https://www.encodeproject.org/files/ENCFF605CSQ/@@download/ENCFF605CSQ.bigBed GRCh38 released mild to moderate bottlenecking, moderate library complexity ENCFF493XLI bigBed narrowPeak peaks ENCSR530XQI ChIP-seq EFO:0002067 K562 cell line Homo sapiens L3MBTL2-human ENCAB000BMG DNA False 2016-06-23 ENCODE 1, 2 ENCFF458SHG 12824001 ENCODE Processing Pipeline dbbd7e991868ce223be5569c4f0fbfd2 https://www.encodeproject.org/files/ENCFF493XLI/@@download/ENCFF493XLI.bigBed GRCh38 released mild to moderate bottlenecking, moderate library complexity ENCFF445RNG bed narrowPeak conservative idr thresholded peaks ENCSR530XQI ChIP-seq EFO:0002067 K562 cell line Homo sapiens L3MBTL2-human ENCAB000BMG DNA False 2016-06-23 ENCODE 1, 2 ENCFF019FWB, ENCFF419RSJ, ENCFF458SHG, ENCFF579YKA 830188 ENCODE Processing Pipeline 13837091c6a6564bf9bd71dc2c3b0d6d https://www.encodeproject.org/files/ENCFF445RNG/@@download/ENCFF445RNG.bed.gz GRCh38 released mild to moderate bottlenecking, moderate library complexity ENCFF857TUM bigBed narrowPeak conservative idr thresholded peaks ENCSR530XQI ChIP-seq EFO:0002067 K562 cell line Homo sapiens L3MBTL2-human ENCAB000BMG DNA False 2016-06-23 ENCODE 1, 2 ENCFF445RNG 1768646 ENCODE Processing Pipeline 86733735a1497f08c9dbb92d1193b278 https://www.encodeproject.org/files/ENCFF857TUM/@@download/ENCFF857TUM.bigBed GRCh38 released mild to moderate bottlenecking, moderate library complexity ENCFF423LPW bed narrowPeak optimal idr thresholded peaks ENCSR530XQI ChIP-seq EFO:0002067 K562 cell line Homo sapiens L3MBTL2-human ENCAB000BMG DNA False 2016-06-23 ENCODE 1, 2 ENCFF019FWB, ENCFF419RSJ, ENCFF458SHG, ENCFF579YKA 963003 ENCODE Processing Pipeline 4b1841acd8c1d519ba0db7a6c19e4987 https://www.encodeproject.org/files/ENCFF423LPW/@@download/ENCFF423LPW.bed.gz GRCh38 released mild to moderate bottlenecking, moderate library complexity ENCFF356AWU bigBed narrowPeak optimal idr thresholded peaks ENCSR530XQI ChIP-seq EFO:0002067 K562 cell line Homo sapiens L3MBTL2-human ENCAB000BMG DNA False 2016-06-23 ENCODE 1, 2 ENCFF423LPW 1994041 ENCODE Processing Pipeline db6b2e64373bc8be7feb0c001238c3e3 https://www.encodeproject.org/files/ENCFF356AWU/@@download/ENCFF356AWU.bigBed GRCh38 released mild to moderate bottlenecking, moderate library complexity ENCFF472TXS bigWig signal p-value ENCSR530XQI ChIP-seq EFO:0002067 K562 cell line Homo sapiens L3MBTL2-human ENCAB000BMG DNA False 2016-06-23 ENCODE 1, 2 ENCFF011MCR, ENCFF051LWI, ENCFF581ZJL, ENCFF767TZS 1888914293 ENCODE Processing Pipeline a3c457e0c2a3318cba57d582c8f1f9d1 https://www.encodeproject.org/files/ENCFF472TXS/@@download/ENCFF472TXS.bigWig hg19 released mild to moderate bottlenecking, moderate library complexity ENCFF890UUN bigWig fold change over control ENCSR530XQI ChIP-seq EFO:0002067 K562 cell line Homo sapiens L3MBTL2-human ENCAB000BMG DNA False 2016-06-23 ENCODE 1, 2 ENCFF011MCR, ENCFF051LWI, ENCFF581ZJL, ENCFF767TZS 2224432737 ENCODE Processing Pipeline d8976951c9f670288ec89cd31658e252 https://www.encodeproject.org/files/ENCFF890UUN/@@download/ENCFF890UUN.bigWig hg19 released mild to moderate bottlenecking, moderate library complexity ENCFF106RFM bigWig signal p-value ENCSR530XQI ChIP-seq EFO:0002067 K562 cell line Homo sapiens L3MBTL2-human ENCAB000BMG DNA False 2016-06-23 ENCODE 1 ENCFF011MCR, ENCFF581ZJL 1102462542 ENCODE Processing Pipeline a75f5ad1a49d7d9cf229351084018548 https://www.encodeproject.org/files/ENCFF106RFM/@@download/ENCFF106RFM.bigWig hg19 released mild to moderate bottlenecking, moderate library complexity ENCFF861OMW bigWig fold change over control ENCSR530XQI ChIP-seq EFO:0002067 K562 cell line Homo sapiens L3MBTL2-human ENCAB000BMG DNA False 2016-06-23 ENCODE 1 ENCFF011MCR, ENCFF581ZJL 1384007914 ENCODE Processing Pipeline eaa7e952c5ec533238e0d86c4e95e589 https://www.encodeproject.org/files/ENCFF861OMW/@@download/ENCFF861OMW.bigWig hg19 released mild to moderate bottlenecking, moderate library complexity ENCFF799TPX bigBed narrowPeak peaks ENCSR530XQI ChIP-seq EFO:0002067 K562 cell line Homo sapiens L3MBTL2-human ENCAB000BMG DNA False 2016-06-23 ENCODE 1 ENCFF471MPD 13064463 ENCODE Processing Pipeline 16bc87b2dbc3293c37c828d15a5dfe09 https://www.encodeproject.org/files/ENCFF799TPX/@@download/ENCFF799TPX.bigBed hg19 released mild to moderate bottlenecking, moderate library complexity ENCFF489ALJ bigWig signal p-value ENCSR530XQI ChIP-seq EFO:0002067 K562 cell line Homo sapiens L3MBTL2-human ENCAB000BMG DNA False 2016-06-23 ENCODE 2 ENCFF051LWI, ENCFF767TZS 1002544949 ENCODE Processing Pipeline 49b35e856e0bb4aa234c9666caed835b https://www.encodeproject.org/files/ENCFF489ALJ/@@download/ENCFF489ALJ.bigWig hg19 released mild to moderate bottlenecking, moderate library complexity ENCFF451MDI bigWig fold change over control ENCSR530XQI ChIP-seq EFO:0002067 K562 cell line Homo sapiens L3MBTL2-human ENCAB000BMG DNA False 2016-06-23 ENCODE 2 ENCFF051LWI, ENCFF767TZS 1217150604 ENCODE Processing Pipeline ad1f680e1a273b7662578bd3f00f3179 https://www.encodeproject.org/files/ENCFF451MDI/@@download/ENCFF451MDI.bigWig hg19 released mild to moderate bottlenecking, moderate library complexity ENCFF432DNZ bigBed narrowPeak optimal idr thresholded peaks ENCSR530XQI ChIP-seq EFO:0002067 K562 cell line Homo sapiens L3MBTL2-human ENCAB000BMG DNA False 2016-06-23 ENCODE 1, 2 ENCFF314ULQ 2059618 ENCODE Processing Pipeline 83b544222f64cbcb9efb984418589049 https://www.encodeproject.org/files/ENCFF432DNZ/@@download/ENCFF432DNZ.bigBed hg19 released mild to moderate bottlenecking, moderate library complexity ENCFF848CIH bigBed narrowPeak peaks ENCSR530XQI ChIP-seq EFO:0002067 K562 cell line Homo sapiens L3MBTL2-human ENCAB000BMG DNA False 2016-06-23 ENCODE 1, 2 ENCFF875ISD 12960022 ENCODE Processing Pipeline bcef46bb25a648801ab2f7ff867e69b1 https://www.encodeproject.org/files/ENCFF848CIH/@@download/ENCFF848CIH.bigBed hg19 released mild to moderate bottlenecking, moderate library complexity ENCFF026BYE bed narrowPeak conservative idr thresholded peaks ENCSR530XQI ChIP-seq EFO:0002067 K562 cell line Homo sapiens L3MBTL2-human ENCAB000BMG DNA False 2016-06-23 ENCODE 1, 2 ENCFF001TDO, ENCFF471MPD, ENCFF706LNT, ENCFF875ISD 870467 ENCODE Processing Pipeline 3ec57cb9f9f1f3c024d9dbc233cf391a https://www.encodeproject.org/files/ENCFF026BYE/@@download/ENCFF026BYE.bed.gz hg19 released mild to moderate bottlenecking, moderate library complexity ENCFF471MPD bed narrowPeak peaks ENCSR530XQI ChIP-seq EFO:0002067 K562 cell line Homo sapiens L3MBTL2-human ENCAB000BMG DNA False 2016-06-23 ENCODE 1 ENCFF011MCR, ENCFF581ZJL 7133917 ENCODE Processing Pipeline eac7607be827468e48cf0c599196747a https://www.encodeproject.org/files/ENCFF471MPD/@@download/ENCFF471MPD.bed.gz hg19 released mild to moderate bottlenecking, moderate library complexity ENCFF706LNT bed narrowPeak peaks ENCSR530XQI ChIP-seq EFO:0002067 K562 cell line Homo sapiens L3MBTL2-human ENCAB000BMG DNA False 2016-06-23 ENCODE 2 ENCFF051LWI, ENCFF767TZS 7049612 ENCODE Processing Pipeline ff995f9cd1c55eec79946c18067b474a https://www.encodeproject.org/files/ENCFF706LNT/@@download/ENCFF706LNT.bed.gz hg19 released mild to moderate bottlenecking, moderate library complexity ENCFF875ISD bed narrowPeak peaks ENCSR530XQI ChIP-seq EFO:0002067 K562 cell line Homo sapiens L3MBTL2-human ENCAB000BMG DNA False 2016-06-23 ENCODE 1, 2 ENCFF011MCR, ENCFF051LWI, ENCFF581ZJL, ENCFF767TZS 7320798 ENCODE Processing Pipeline 87a62b0c6b3efe0893fb3b22d77a4ae4 https://www.encodeproject.org/files/ENCFF875ISD/@@download/ENCFF875ISD.bed.gz hg19 released mild to moderate bottlenecking, moderate library complexity ENCFF323KHZ bigBed narrowPeak peaks ENCSR530XQI ChIP-seq EFO:0002067 K562 cell line Homo sapiens L3MBTL2-human ENCAB000BMG DNA False 2016-06-23 ENCODE 2 ENCFF706LNT 12866135 ENCODE Processing Pipeline e413c2dd32f121f0e9602de17d450b81 https://www.encodeproject.org/files/ENCFF323KHZ/@@download/ENCFF323KHZ.bigBed hg19 released mild to moderate bottlenecking, moderate library complexity ENCFF686TUG bigBed narrowPeak conservative idr thresholded peaks ENCSR530XQI ChIP-seq EFO:0002067 K562 cell line Homo sapiens L3MBTL2-human ENCAB000BMG DNA False 2016-06-23 ENCODE 1, 2 ENCFF026BYE 1827892 ENCODE Processing Pipeline 478f43ad474b5025cad1440cab39eaa5 https://www.encodeproject.org/files/ENCFF686TUG/@@download/ENCFF686TUG.bigBed hg19 released mild to moderate bottlenecking, moderate library complexity ENCFF314ULQ bed narrowPeak optimal idr thresholded peaks ENCSR530XQI ChIP-seq EFO:0002067 K562 cell line Homo sapiens L3MBTL2-human ENCAB000BMG DNA False 2016-06-23 ENCODE 1, 2 ENCFF001TDO, ENCFF471MPD, ENCFF706LNT, ENCFF875ISD 1006532 ENCODE Processing Pipeline 807407007c047f1cd624d59e5aff4373 https://www.encodeproject.org/files/ENCFF314ULQ/@@download/ENCFF314ULQ.bed.gz hg19 released mild to moderate bottlenecking, moderate library complexity ENCFF000YGC bam alignments ENCSR000EGV ChIP-seq EFO:0002067 K562 cell line Homo sapiens BHLHE40-human ENCAB000AEK DNA see document see document False 2011-10-29 ENCODE 1 ENCFF000YGJ 593240881 Michael Snyder, Stanford 023fa258daff5c2051b033cae073e587 https://www.encodeproject.org/files/ENCFF000YGC/@@download/ENCFF000YGC.bam hg19 archived inconsistent target of control experiment, low read length biological replicates with identical biosample, duplicate lane review ENCFF000YGD bigBed narrowPeak peaks ENCSR000EGV ChIP-seq EFO:0002067 K562 cell line Homo sapiens BHLHE40-human ENCAB000AEK DNA see document see document False 2011-10-29 ENCODE ENCFF001VMB 3449246 Michael Snyder, Stanford f9f33b032948d3de7b149123e7eb5f52 https://www.encodeproject.org/files/ENCFF000YGD/@@download/ENCFF000YGD.bigBed hg19 archived inconsistent target of control experiment, low read length biological replicates with identical biosample, duplicate lane review ENCFF000YGE bam alignments ENCSR000EGV ChIP-seq EFO:0002067 K562 cell line Homo sapiens BHLHE40-human ENCAB000AEK DNA see document see document False 2011-10-29 ENCODE 2 ENCFF000YGQ 631708925 Michael Snyder, Stanford 8971f3de81f7c9c87f9a6b3e3a5bb185 https://www.encodeproject.org/files/ENCFF000YGE/@@download/ENCFF000YGE.bam hg19 archived inconsistent target of control experiment, low read length biological replicates with identical biosample, duplicate lane review ENCFF000YGG bigWig signal ENCSR000EGV ChIP-seq EFO:0002067 K562 cell line Homo sapiens BHLHE40-human ENCAB000AEK DNA see document see document False 2011-10-29 ENCODE 452385333 Michael Snyder, Stanford b10d8e4445195cacc79c38b6a4c1dc40 https://www.encodeproject.org/files/ENCFF000YGG/@@download/ENCFF000YGG.bigWig hg19 archived inconsistent target of control experiment, low read length biological replicates with identical biosample, duplicate lane review, missing derived_from ENCFF000YGJ fastq reads ENCSR000EGV ChIP-seq EFO:0002067 K562 cell line Homo sapiens BHLHE40-human ENCAB000AEK DNA see document see document False 2011-10-29 ENCODE 1 1 36 single-ended 1471208804 Michael Snyder, Stanford 1ee58646fe620b30869c03f55a32f70c https://www.encodeproject.org/files/ENCFF000YGJ/@@download/ENCFF000YGJ.fastq.gz Illumina Genome Analyzer /files/ENCFF000YRB/ released inconsistent target of control experiment, low read length biological replicates with identical biosample, duplicate lane review ENCFF000YGQ fastq reads ENCSR000EGV ChIP-seq EFO:0002067 K562 cell line Homo sapiens BHLHE40-human ENCAB000AEK DNA see document see document False 2011-10-29 ENCODE 2 1 36 single-ended 1271059091 Michael Snyder, Stanford ea212715930ce9fae9641e0ba1123be7 https://www.encodeproject.org/files/ENCFF000YGQ/@@download/ENCFF000YGQ.fastq.gz Illumina Genome Analyzer /files/ENCFF000YRB/ released inconsistent target of control experiment, low read length biological replicates with identical biosample, duplicate lane review ENCFF001VMB bed narrowPeak peaks ENCSR000EGV ChIP-seq EFO:0002067 K562 cell line Homo sapiens BHLHE40-human ENCAB000AEK DNA see document see document False 2011-10-29 ENCODE 1400659 Michael Snyder, Stanford 46c2e41f59e8c2e9cdceddfe7dd8ab4c https://www.encodeproject.org/files/ENCFF001VMB/@@download/ENCFF001VMB.bed.gz hg19 archived inconsistent target of control experiment, low read length biological replicates with identical biosample, duplicate lane review, missing derived_from ENCFF002CVQ bed narrowPeak optimal idr thresholded peaks ENCSR000EGV ChIP-seq EFO:0002067 K562 cell line Homo sapiens BHLHE40-human ENCAB000AEK DNA see document see document False 2011-10-29 ENCODE 558105 ENCODE Consortium Analysis Working Group bc87d5c569c83dc64331f326019fb4d7 https://www.encodeproject.org/files/ENCFF002CVQ/@@download/ENCFF002CVQ.bed.gz hg19 archived inconsistent target of control experiment, low read length biological replicates with identical biosample, duplicate lane review, missing derived_from ENCFF072JBV bigBed narrowPeak optimal idr thresholded peaks ENCSR000EGV ChIP-seq EFO:0002067 K562 cell line Homo sapiens BHLHE40-human ENCAB000AEK DNA see document see document False 2011-10-29 ENCODE ENCFF002CVQ 1248612 ENCODE Consortium 3b4d94ae60b34a2ed3d97eebbc25dc71 https://www.encodeproject.org/files/ENCFF072JBV/@@download/ENCFF072JBV.bigBed hg19 archived inconsistent target of control experiment, low read length biological replicates with identical biosample, duplicate lane review ENCFF062TRG bam unfiltered alignments ENCSR000EGV ChIP-seq EFO:0002067 K562 cell line Homo sapiens BHLHE40-human ENCAB000AEK DNA see document see document False 2011-10-29 ENCODE 2 36 ENCFF000YGQ, ENCFF643CGH 1540541768 ENCODE Processing Pipeline d3f5644ce3e3cb3f3da21a71a527eb63 https://www.encodeproject.org/files/ENCFF062TRG/@@download/ENCFF062TRG.bam GRCh38 released inconsistent target of control experiment, low read length biological replicates with identical biosample, duplicate lane review ENCFF213JOK bam alignments ENCSR000EGV ChIP-seq EFO:0002067 K562 cell line Homo sapiens BHLHE40-human ENCAB000AEK DNA see document see document False 2011-10-29 ENCODE 2 36 ENCFF000YGQ, ENCFF643CGH 1025876348 ENCODE Processing Pipeline 8f24fbd966f9b45f47c488eab2d15ab5 https://www.encodeproject.org/files/ENCFF213JOK/@@download/ENCFF213JOK.bam GRCh38 released inconsistent target of control experiment, low read length biological replicates with identical biosample, duplicate lane review ENCFF950BGX bam unfiltered alignments ENCSR000EGV ChIP-seq EFO:0002067 K562 cell line Homo sapiens BHLHE40-human ENCAB000AEK DNA see document see document False 2011-10-29 ENCODE 1 36 ENCFF000YGJ, ENCFF643CGH 1759484240 ENCODE Processing Pipeline 4148bd702dc740c21ba320f2108bc71c https://www.encodeproject.org/files/ENCFF950BGX/@@download/ENCFF950BGX.bam GRCh38 released inconsistent target of control experiment, low read length biological replicates with identical biosample, duplicate lane review ENCFF988VSQ bam alignments ENCSR000EGV ChIP-seq EFO:0002067 K562 cell line Homo sapiens BHLHE40-human ENCAB000AEK DNA see document see document False 2011-10-29 ENCODE 1 36 ENCFF000YGJ, ENCFF643CGH 1135718560 ENCODE Processing Pipeline 4e05459f011a7889d4b83bef71e5364e https://www.encodeproject.org/files/ENCFF988VSQ/@@download/ENCFF988VSQ.bam GRCh38 released inconsistent target of control experiment, low read length biological replicates with identical biosample, duplicate lane review ENCFF726VVW bam unfiltered alignments ENCSR000EGV ChIP-seq EFO:0002067 K562 cell line Homo sapiens BHLHE40-human ENCAB000AEK DNA see document see document False 2011-10-29 ENCODE 1 36 ENCFF000YGJ, ENCFF807MUK 1752060020 ENCODE Processing Pipeline 57066a1278aadf28a01d981aa492085a https://www.encodeproject.org/files/ENCFF726VVW/@@download/ENCFF726VVW.bam hg19 released inconsistent target of control experiment, low read length biological replicates with identical biosample, duplicate lane review ENCFF106IJG bam alignments ENCSR000EGV ChIP-seq EFO:0002067 K562 cell line Homo sapiens BHLHE40-human ENCAB000AEK DNA see document see document False 2011-10-29 ENCODE 2 36 ENCFF000YGQ, ENCFF807MUK 1026537936 ENCODE Processing Pipeline e7c441f88dc275be4ddb0e628749f68b https://www.encodeproject.org/files/ENCFF106IJG/@@download/ENCFF106IJG.bam hg19 released inconsistent target of control experiment, low read length biological replicates with identical biosample, duplicate lane review ENCFF823NIQ bam alignments ENCSR000EGV ChIP-seq EFO:0002067 K562 cell line Homo sapiens BHLHE40-human ENCAB000AEK DNA see document see document False 2011-10-29 ENCODE 1 36 ENCFF000YGJ, ENCFF807MUK 1136451441 ENCODE Processing Pipeline 7f36ed455e6e004da7c1233f777568b0 https://www.encodeproject.org/files/ENCFF823NIQ/@@download/ENCFF823NIQ.bam hg19 released inconsistent target of control experiment, low read length biological replicates with identical biosample, duplicate lane review ENCFF998ZEU bam unfiltered alignments ENCSR000EGV ChIP-seq EFO:0002067 K562 cell line Homo sapiens BHLHE40-human ENCAB000AEK DNA see document see document False 2011-10-29 ENCODE 2 36 ENCFF000YGQ, ENCFF807MUK 1533962855 ENCODE Processing Pipeline ef18eab0f13e547bc089046941ff669c https://www.encodeproject.org/files/ENCFF998ZEU/@@download/ENCFF998ZEU.bam hg19 released inconsistent target of control experiment, low read length biological replicates with identical biosample, duplicate lane review ENCFF281SYI bigWig signal p-value ENCSR000EGV ChIP-seq EFO:0002067 K562 cell line Homo sapiens BHLHE40-human ENCAB000AEK DNA see document see document False 2011-10-29 ENCODE 1 ENCFF710NTS, ENCFF823NIQ 517143909 ENCODE Processing Pipeline c2f195c7268dce2a3852a62a0a7acfcc https://www.encodeproject.org/files/ENCFF281SYI/@@download/ENCFF281SYI.bigWig hg19 released inconsistent target of control experiment, low read length biological replicates with identical biosample, duplicate lane review ENCFF423JHI bigWig signal p-value ENCSR000EGV ChIP-seq EFO:0002067 K562 cell line Homo sapiens BHLHE40-human ENCAB000AEK DNA see document see document False 2011-10-29 ENCODE 2 ENCFF106IJG, ENCFF710NTS 520051215 ENCODE Processing Pipeline 4e85df6627de3343579288be050f4bc8 https://www.encodeproject.org/files/ENCFF423JHI/@@download/ENCFF423JHI.bigWig hg19 released inconsistent target of control experiment, low read length biological replicates with identical biosample, duplicate lane review ENCFF821DQQ bigWig signal p-value ENCSR000EGV ChIP-seq EFO:0002067 K562 cell line Homo sapiens BHLHE40-human ENCAB000AEK DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF106IJG, ENCFF710NTS, ENCFF823NIQ 525595467 ENCODE Processing Pipeline b1884cf7b4b81d9cd845f1e71716d375 https://www.encodeproject.org/files/ENCFF821DQQ/@@download/ENCFF821DQQ.bigWig hg19 released inconsistent target of control experiment, low read length biological replicates with identical biosample, duplicate lane review ENCFF434PYK bigWig fold change over control ENCSR000EGV ChIP-seq EFO:0002067 K562 cell line Homo sapiens BHLHE40-human ENCAB000AEK DNA see document see document False 2011-10-29 ENCODE 1 ENCFF710NTS, ENCFF823NIQ 479769197 ENCODE Processing Pipeline 40f43683fdbd5d8dd038de59496d65f7 https://www.encodeproject.org/files/ENCFF434PYK/@@download/ENCFF434PYK.bigWig hg19 released inconsistent target of control experiment, low read length biological replicates with identical biosample, duplicate lane review ENCFF741NDQ bigWig fold change over control ENCSR000EGV ChIP-seq EFO:0002067 K562 cell line Homo sapiens BHLHE40-human ENCAB000AEK DNA see document see document False 2011-10-29 ENCODE 2 ENCFF106IJG, ENCFF710NTS 491310388 ENCODE Processing Pipeline f1f1502c50e02f7909a9385d466ea20d https://www.encodeproject.org/files/ENCFF741NDQ/@@download/ENCFF741NDQ.bigWig hg19 released inconsistent target of control experiment, low read length biological replicates with identical biosample, duplicate lane review ENCFF368XWG bed narrowPeak peaks ENCSR000EGV ChIP-seq EFO:0002067 K562 cell line Homo sapiens BHLHE40-human ENCAB000AEK DNA see document see document False 2011-10-29 ENCODE 2 ENCFF106IJG, ENCFF710NTS 5431250 ENCODE Processing Pipeline 03e3bc481010a522f0be761ea0c49ec1 https://www.encodeproject.org/files/ENCFF368XWG/@@download/ENCFF368XWG.bed.gz hg19 released inconsistent target of control experiment, low read length biological replicates with identical biosample, duplicate lane review ENCFF815ARN bigBed narrowPeak conservative idr thresholded peaks ENCSR000EGV ChIP-seq EFO:0002067 K562 cell line Homo sapiens BHLHE40-human ENCAB000AEK DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF432TSX 972305 ENCODE Processing Pipeline 574bbe676c6fe63ac78f846b94967af1 https://www.encodeproject.org/files/ENCFF815ARN/@@download/ENCFF815ARN.bigBed hg19 released inconsistent target of control experiment, low read length biological replicates with identical biosample, duplicate lane review ENCFF179NDS bed narrowPeak optimal idr thresholded peaks ENCSR000EGV ChIP-seq EFO:0002067 K562 cell line Homo sapiens BHLHE40-human ENCAB000AEK DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF001TDO, ENCFF077KRK, ENCFF159GKF, ENCFF368XWG 491465 ENCODE Processing Pipeline 8a7b06a474913c6365c15ef047a6db83 https://www.encodeproject.org/files/ENCFF179NDS/@@download/ENCFF179NDS.bed.gz hg19 released inconsistent target of control experiment, low read length biological replicates with identical biosample, duplicate lane review ENCFF765OJY bigWig fold change over control ENCSR000EGV ChIP-seq EFO:0002067 K562 cell line Homo sapiens BHLHE40-human ENCAB000AEK DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF106IJG, ENCFF710NTS, ENCFF823NIQ 807870591 ENCODE Processing Pipeline ac607db429b6f42758ec74f82a9a478e https://www.encodeproject.org/files/ENCFF765OJY/@@download/ENCFF765OJY.bigWig hg19 released inconsistent target of control experiment, low read length biological replicates with identical biosample, duplicate lane review ENCFF354MLD bigBed narrowPeak peaks ENCSR000EGV ChIP-seq EFO:0002067 K562 cell line Homo sapiens BHLHE40-human ENCAB000AEK DNA see document see document False 2011-10-29 ENCODE 1 ENCFF077KRK 13171389 ENCODE Processing Pipeline 715a6ad7bfd1a38e00c62ebe6f3e90bb https://www.encodeproject.org/files/ENCFF354MLD/@@download/ENCFF354MLD.bigBed hg19 released inconsistent target of control experiment, low read length biological replicates with identical biosample, duplicate lane review ENCFF077KRK bed narrowPeak peaks ENCSR000EGV ChIP-seq EFO:0002067 K562 cell line Homo sapiens BHLHE40-human ENCAB000AEK DNA see document see document False 2011-10-29 ENCODE 1 ENCFF710NTS, ENCFF823NIQ 5501529 ENCODE Processing Pipeline 1e02c94c7e82b16b361f512039fdb43a https://www.encodeproject.org/files/ENCFF077KRK/@@download/ENCFF077KRK.bed.gz hg19 released inconsistent target of control experiment, low read length biological replicates with identical biosample, duplicate lane review ENCFF222RRB bigBed narrowPeak optimal idr thresholded peaks ENCSR000EGV ChIP-seq EFO:0002067 K562 cell line Homo sapiens BHLHE40-human ENCAB000AEK DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF179NDS 1017169 ENCODE Processing Pipeline afe31283f6131e81e7dd58c76ee6773d https://www.encodeproject.org/files/ENCFF222RRB/@@download/ENCFF222RRB.bigBed hg19 released inconsistent target of control experiment, low read length biological replicates with identical biosample, duplicate lane review ENCFF432TSX bed narrowPeak conservative idr thresholded peaks ENCSR000EGV ChIP-seq EFO:0002067 K562 cell line Homo sapiens BHLHE40-human ENCAB000AEK DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF001TDO, ENCFF077KRK, ENCFF159GKF, ENCFF368XWG 463671 ENCODE Processing Pipeline 3b2345fad1e34528d67696019967b345 https://www.encodeproject.org/files/ENCFF432TSX/@@download/ENCFF432TSX.bed.gz hg19 released inconsistent target of control experiment, low read length biological replicates with identical biosample, duplicate lane review ENCFF159GKF bed narrowPeak peaks ENCSR000EGV ChIP-seq EFO:0002067 K562 cell line Homo sapiens BHLHE40-human ENCAB000AEK DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF106IJG, ENCFF710NTS, ENCFF823NIQ 6320048 ENCODE Processing Pipeline cd322e707233bb8dcec5b05765ff167b https://www.encodeproject.org/files/ENCFF159GKF/@@download/ENCFF159GKF.bed.gz hg19 released inconsistent target of control experiment, low read length biological replicates with identical biosample, duplicate lane review ENCFF348TMB bigBed narrowPeak peaks ENCSR000EGV ChIP-seq EFO:0002067 K562 cell line Homo sapiens BHLHE40-human ENCAB000AEK DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF159GKF 13442962 ENCODE Processing Pipeline 04f8ff7644e64f864b8b7d43b96db748 https://www.encodeproject.org/files/ENCFF348TMB/@@download/ENCFF348TMB.bigBed hg19 released inconsistent target of control experiment, low read length biological replicates with identical biosample, duplicate lane review ENCFF903QXZ bigBed narrowPeak peaks ENCSR000EGV ChIP-seq EFO:0002067 K562 cell line Homo sapiens BHLHE40-human ENCAB000AEK DNA see document see document False 2011-10-29 ENCODE 2 ENCFF368XWG 11202129 ENCODE Processing Pipeline 0debf0eda8e7fb6886e72ef15aa7a08f https://www.encodeproject.org/files/ENCFF903QXZ/@@download/ENCFF903QXZ.bigBed hg19 released inconsistent target of control experiment, low read length biological replicates with identical biosample, duplicate lane review ENCFF843ITZ bigWig signal p-value ENCSR000EGV ChIP-seq EFO:0002067 K562 cell line Homo sapiens BHLHE40-human ENCAB000AEK DNA see document see document False 2011-10-29 ENCODE 1 ENCFF988VSQ 516599806 ENCODE Processing Pipeline 5877d3b7b7fcb62c3e8a039def4d455f https://www.encodeproject.org/files/ENCFF843ITZ/@@download/ENCFF843ITZ.bigWig GRCh38 released inconsistent target of control experiment, low read length biological replicates with identical biosample, duplicate lane review ENCFF212NIJ bigWig fold change over control ENCSR000EGV ChIP-seq EFO:0002067 K562 cell line Homo sapiens BHLHE40-human ENCAB000AEK DNA see document see document False 2011-10-29 ENCODE 1 ENCFF988VSQ 475540567 ENCODE Processing Pipeline bda74fd0ca1ff3292552a1d3ea78a6ee https://www.encodeproject.org/files/ENCFF212NIJ/@@download/ENCFF212NIJ.bigWig GRCh38 released inconsistent target of control experiment, low read length biological replicates with identical biosample, duplicate lane review ENCFF585OPQ bed narrowPeak peaks ENCSR000EGV ChIP-seq EFO:0002067 K562 cell line Homo sapiens BHLHE40-human ENCAB000AEK DNA see document see document False 2011-10-29 ENCODE 2 ENCFF213JOK 5407285 ENCODE Processing Pipeline c890a3dc305a9edbe1ac47477a532968 https://www.encodeproject.org/files/ENCFF585OPQ/@@download/ENCFF585OPQ.bed.gz GRCh38 released inconsistent target of control experiment, low read length biological replicates with identical biosample, duplicate lane review ENCFF356UCG bigWig signal p-value ENCSR000EGV ChIP-seq EFO:0002067 K562 cell line Homo sapiens BHLHE40-human ENCAB000AEK DNA see document see document False 2011-10-29 ENCODE 2 ENCFF213JOK 519528603 ENCODE Processing Pipeline 7ea14009a8ce621d1112834d8fdd16dc https://www.encodeproject.org/files/ENCFF356UCG/@@download/ENCFF356UCG.bigWig GRCh38 released inconsistent target of control experiment, low read length biological replicates with identical biosample, duplicate lane review ENCFF505LZQ bigWig fold change over control ENCSR000EGV ChIP-seq EFO:0002067 K562 cell line Homo sapiens BHLHE40-human ENCAB000AEK DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF213JOK, ENCFF988VSQ 808225766 ENCODE Processing Pipeline 3c35e3b0964405ded8753896fe353718 https://www.encodeproject.org/files/ENCFF505LZQ/@@download/ENCFF505LZQ.bigWig GRCh38 released inconsistent target of control experiment, low read length biological replicates with identical biosample, duplicate lane review ENCFF779FXA bigBed narrowPeak conservative idr thresholded peaks ENCSR000EGV ChIP-seq EFO:0002067 K562 cell line Homo sapiens BHLHE40-human ENCAB000AEK DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF819MHF 759502 ENCODE Processing Pipeline 9b3af870453574b9d7c03c7974718682 https://www.encodeproject.org/files/ENCFF779FXA/@@download/ENCFF779FXA.bigBed GRCh38 released inconsistent target of control experiment, low read length biological replicates with identical biosample, duplicate lane review ENCFF534PVK bed narrowPeak peaks ENCSR000EGV ChIP-seq EFO:0002067 K562 cell line Homo sapiens BHLHE40-human ENCAB000AEK DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF213JOK, ENCFF988VSQ 6244298 ENCODE Processing Pipeline 52c8c7653f45314b85b70264e9cf1009 https://www.encodeproject.org/files/ENCFF534PVK/@@download/ENCFF534PVK.bed.gz GRCh38 released inconsistent target of control experiment, low read length biological replicates with identical biosample, duplicate lane review ENCFF464XIX bigBed narrowPeak peaks ENCSR000EGV ChIP-seq EFO:0002067 K562 cell line Homo sapiens BHLHE40-human ENCAB000AEK DNA see document see document False 2011-10-29 ENCODE 2 ENCFF585OPQ 11187069 ENCODE Processing Pipeline fe61ef7d66f29c2f72ad8e418680de35 https://www.encodeproject.org/files/ENCFF464XIX/@@download/ENCFF464XIX.bigBed GRCh38 released inconsistent target of control experiment, low read length biological replicates with identical biosample, duplicate lane review ENCFF316PXK bigWig signal p-value ENCSR000EGV ChIP-seq EFO:0002067 K562 cell line Homo sapiens BHLHE40-human ENCAB000AEK DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF213JOK, ENCFF988VSQ 525051543 ENCODE Processing Pipeline dcbe4aeb172a6b50145ceb073975dbb9 https://www.encodeproject.org/files/ENCFF316PXK/@@download/ENCFF316PXK.bigWig GRCh38 released inconsistent target of control experiment, low read length biological replicates with identical biosample, duplicate lane review ENCFF868UQS bigWig fold change over control ENCSR000EGV ChIP-seq EFO:0002067 K562 cell line Homo sapiens BHLHE40-human ENCAB000AEK DNA see document see document False 2011-10-29 ENCODE 2 ENCFF213JOK 487570416 ENCODE Processing Pipeline b82e0357e1d3e28c27201907ec41b901 https://www.encodeproject.org/files/ENCFF868UQS/@@download/ENCFF868UQS.bigWig GRCh38 released inconsistent target of control experiment, low read length biological replicates with identical biosample, duplicate lane review ENCFF584IDR bigBed narrowPeak peaks ENCSR000EGV ChIP-seq EFO:0002067 K562 cell line Homo sapiens BHLHE40-human ENCAB000AEK DNA see document see document False 2011-10-29 ENCODE 1 ENCFF511YJO 13174271 ENCODE Processing Pipeline 91fabba4fb2c71e852133ce5aa719ac0 https://www.encodeproject.org/files/ENCFF584IDR/@@download/ENCFF584IDR.bigBed GRCh38 released inconsistent target of control experiment, low read length biological replicates with identical biosample, duplicate lane review ENCFF511YJO bed narrowPeak peaks ENCSR000EGV ChIP-seq EFO:0002067 K562 cell line Homo sapiens BHLHE40-human ENCAB000AEK DNA see document see document False 2011-10-29 ENCODE 1 ENCFF988VSQ 5500702 ENCODE Processing Pipeline 195a2e7c630e89781c657037aad79ef9 https://www.encodeproject.org/files/ENCFF511YJO/@@download/ENCFF511YJO.bed.gz GRCh38 released inconsistent target of control experiment, low read length biological replicates with identical biosample, duplicate lane review ENCFF819MHF bed narrowPeak conservative idr thresholded peaks ENCSR000EGV ChIP-seq EFO:0002067 K562 cell line Homo sapiens BHLHE40-human ENCAB000AEK DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF419RSJ, ENCFF511YJO, ENCFF534PVK, ENCFF585OPQ 436302 ENCODE Processing Pipeline 599c61554f65d243f3bc3523570e2707 https://www.encodeproject.org/files/ENCFF819MHF/@@download/ENCFF819MHF.bed.gz GRCh38 released inconsistent target of control experiment, low read length biological replicates with identical biosample, duplicate lane review ENCFF096VXJ bigBed narrowPeak peaks ENCSR000EGV ChIP-seq EFO:0002067 K562 cell line Homo sapiens BHLHE40-human ENCAB000AEK DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF534PVK 13363443 ENCODE Processing Pipeline 8fd1e732ae1c44fd135a5e282b62ab5c https://www.encodeproject.org/files/ENCFF096VXJ/@@download/ENCFF096VXJ.bigBed GRCh38 released inconsistent target of control experiment, low read length biological replicates with identical biosample, duplicate lane review ENCFF918GAZ bigBed narrowPeak optimal idr thresholded peaks ENCSR000EGV ChIP-seq EFO:0002067 K562 cell line Homo sapiens BHLHE40-human ENCAB000AEK DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF477JTV 798984 ENCODE Processing Pipeline 00bb075bdd958ec8bb5f8889329d9dc1 https://www.encodeproject.org/files/ENCFF918GAZ/@@download/ENCFF918GAZ.bigBed GRCh38 released inconsistent target of control experiment, low read length biological replicates with identical biosample, duplicate lane review ENCFF477JTV bed narrowPeak optimal idr thresholded peaks ENCSR000EGV ChIP-seq EFO:0002067 K562 cell line Homo sapiens BHLHE40-human ENCAB000AEK DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF419RSJ, ENCFF511YJO, ENCFF534PVK, ENCFF585OPQ 466109 ENCODE Processing Pipeline eee6b076fbdd11c420adab6839341636 https://www.encodeproject.org/files/ENCFF477JTV/@@download/ENCFF477JTV.bed.gz GRCh38 released inconsistent target of control experiment, low read length biological replicates with identical biosample, duplicate lane review ENCFF356VYM fastq reads ENCSR119VCX ChIP-seq EFO:0002067 K562 cell line Homo sapiens PHF21A-human ENCAB814YYA DNA False 2017-09-28 ENCODE 1 1 100 paired-ended 2 ENCFF282GIL 3047713005 Michael Snyder, Stanford 77311060c1079b5c17d5869db84e4dc0 SRA:SRR6212684 https://www.encodeproject.org/files/ENCFF356VYM/@@download/ENCFF356VYM.fastq.gz Illumina HiSeq 2000 /files/ENCFF368UOC/ released borderline replicate concordance, low read depth ENCFF608JOK fastq reads ENCSR119VCX ChIP-seq EFO:0002067 K562 cell line Homo sapiens PHF21A-human ENCAB814YYA DNA False 2017-09-28 ENCODE 2 1 100 paired-ended 2 ENCFF025MOI 2111287594 Michael Snyder, Stanford eb7d2bf38bf1037f8c67ed56d4d4327e SRA:SRR6212683 https://www.encodeproject.org/files/ENCFF608JOK/@@download/ENCFF608JOK.fastq.gz Illumina HiSeq 2000 /files/ENCFF608MDV/ released borderline replicate concordance, low read depth ENCFF282GIL fastq reads ENCSR119VCX ChIP-seq EFO:0002067 K562 cell line Homo sapiens PHF21A-human ENCAB814YYA DNA False 2017-09-28 ENCODE 1 1 100 paired-ended 1 ENCFF356VYM 3018520360 Michael Snyder, Stanford 28863095fbd1efd26a709d540470deb8 SRA:SRR6212684 https://www.encodeproject.org/files/ENCFF282GIL/@@download/ENCFF282GIL.fastq.gz Illumina HiSeq 2000 /files/ENCFF410PHD/ released borderline replicate concordance, low read depth ENCFF025MOI fastq reads ENCSR119VCX ChIP-seq EFO:0002067 K562 cell line Homo sapiens PHF21A-human ENCAB814YYA DNA False 2017-09-28 ENCODE 2 1 100 paired-ended 1 ENCFF608JOK 2084823258 Michael Snyder, Stanford 4f1e1ac3a8eddf29b9a68d379d2c5eef SRA:SRR6212683 https://www.encodeproject.org/files/ENCFF025MOI/@@download/ENCFF025MOI.fastq.gz Illumina HiSeq 2000 /files/ENCFF240DTE/ released borderline replicate concordance, low read depth ENCFF647GNO bam unfiltered alignments ENCSR119VCX ChIP-seq EFO:0002067 K562 cell line Homo sapiens PHF21A-human ENCAB814YYA DNA False 2017-09-28 ENCODE 2 100 ENCFF025MOI, ENCFF608JOK, ENCFF807MUK 4615497408 ENCODE Processing Pipeline 7cb9e9451fe97ef7ec2f2ed790875dc1 https://www.encodeproject.org/files/ENCFF647GNO/@@download/ENCFF647GNO.bam hg19 released borderline replicate concordance, low read depth ENCFF828EAF bam unfiltered alignments ENCSR119VCX ChIP-seq EFO:0002067 K562 cell line Homo sapiens PHF21A-human ENCAB814YYA DNA False 2017-09-28 ENCODE 2 100 ENCFF025MOI, ENCFF608JOK, ENCFF643CGH 4623678073 ENCODE Processing Pipeline 68c8e7d991d8108bf1b678db32b14c04 https://www.encodeproject.org/files/ENCFF828EAF/@@download/ENCFF828EAF.bam GRCh38 released borderline replicate concordance, low read depth ENCFF815FDI bam unfiltered alignments ENCSR119VCX ChIP-seq EFO:0002067 K562 cell line Homo sapiens PHF21A-human ENCAB814YYA DNA False 2017-09-28 ENCODE 1 100 ENCFF282GIL, ENCFF356VYM, ENCFF643CGH 6500880676 ENCODE Processing Pipeline 8fb1681cda05023dd08939b1c7ae65f5 https://www.encodeproject.org/files/ENCFF815FDI/@@download/ENCFF815FDI.bam GRCh38 released borderline replicate concordance, low read depth ENCFF565AAY bam unfiltered alignments ENCSR119VCX ChIP-seq EFO:0002067 K562 cell line Homo sapiens PHF21A-human ENCAB814YYA DNA False 2017-09-28 ENCODE 1 100 ENCFF282GIL, ENCFF356VYM, ENCFF807MUK 6492097731 ENCODE Processing Pipeline fff66a59fd3f7766d6559c4675f042e2 https://www.encodeproject.org/files/ENCFF565AAY/@@download/ENCFF565AAY.bam hg19 released borderline replicate concordance, low read depth ENCFF118SOA bam alignments ENCSR119VCX ChIP-seq EFO:0002067 K562 cell line Homo sapiens PHF21A-human ENCAB814YYA DNA False 2017-09-28 ENCODE 2 100 ENCFF025MOI, ENCFF608JOK, ENCFF643CGH 3748417070 ENCODE Processing Pipeline c49f757feeaa17d7eb54b95ec556fb3e https://www.encodeproject.org/files/ENCFF118SOA/@@download/ENCFF118SOA.bam GRCh38 released borderline replicate concordance, low read depth ENCFF376ISC bam alignments ENCSR119VCX ChIP-seq EFO:0002067 K562 cell line Homo sapiens PHF21A-human ENCAB814YYA DNA False 2017-09-28 ENCODE 2 100 ENCFF025MOI, ENCFF608JOK, ENCFF807MUK 3752858471 ENCODE Processing Pipeline 7b138886894ac422a02e509ae549d3ab https://www.encodeproject.org/files/ENCFF376ISC/@@download/ENCFF376ISC.bam hg19 released borderline replicate concordance, low read depth ENCFF359CBG bam alignments ENCSR119VCX ChIP-seq EFO:0002067 K562 cell line Homo sapiens PHF21A-human ENCAB814YYA DNA False 2017-09-28 ENCODE 1 100 ENCFF282GIL, ENCFF356VYM, ENCFF807MUK 5348158669 ENCODE Processing Pipeline 1a6b3999a0be816e6508c4cd370d0497 https://www.encodeproject.org/files/ENCFF359CBG/@@download/ENCFF359CBG.bam hg19 released borderline replicate concordance, low read depth ENCFF357AUM bam alignments ENCSR119VCX ChIP-seq EFO:0002067 K562 cell line Homo sapiens PHF21A-human ENCAB814YYA DNA False 2017-09-28 ENCODE 1 100 ENCFF282GIL, ENCFF356VYM, ENCFF643CGH 5346136014 ENCODE Processing Pipeline b9b12a3c0c6bf55d78e81ca120decb25 https://www.encodeproject.org/files/ENCFF357AUM/@@download/ENCFF357AUM.bam GRCh38 released borderline replicate concordance, low read depth ENCFF224PYH bigWig fold change over control ENCSR119VCX ChIP-seq EFO:0002067 K562 cell line Homo sapiens PHF21A-human ENCAB814YYA DNA False 2017-09-28 ENCODE 1, 2 ENCFF262CJE, ENCFF359CBG, ENCFF376ISC, ENCFF506DFV 1890073821 ENCODE Processing Pipeline f4f29048cd4ef543ab460148bc48bfa3 https://www.encodeproject.org/files/ENCFF224PYH/@@download/ENCFF224PYH.bigWig hg19 released borderline replicate concordance, low read depth ENCFF776LQY bed narrowPeak peaks ENCSR119VCX ChIP-seq EFO:0002067 K562 cell line Homo sapiens PHF21A-human ENCAB814YYA DNA False 2017-09-28 ENCODE 1 ENCFF262CJE, ENCFF359CBG, ENCFF506DFV 6394384 ENCODE Processing Pipeline b4546201bfab9d5668f1ae28cd6976eb https://www.encodeproject.org/files/ENCFF776LQY/@@download/ENCFF776LQY.bed.gz hg19 released borderline replicate concordance, low read depth ENCFF755RLA bigBed narrowPeak peaks ENCSR119VCX ChIP-seq EFO:0002067 K562 cell line Homo sapiens PHF21A-human ENCAB814YYA DNA False 2017-09-28 ENCODE 1 ENCFF776LQY 11290651 ENCODE Processing Pipeline d64277f259c8fbd7d712873fcc29d5f2 https://www.encodeproject.org/files/ENCFF755RLA/@@download/ENCFF755RLA.bigBed hg19 released borderline replicate concordance, low read depth ENCFF691UGL bigBed narrowPeak peaks ENCSR119VCX ChIP-seq EFO:0002067 K562 cell line Homo sapiens PHF21A-human ENCAB814YYA DNA False 2017-09-28 ENCODE 2 ENCFF700GJA 11292375 ENCODE Processing Pipeline 776b5dbd2fdcd2008f6697942e75be6f https://www.encodeproject.org/files/ENCFF691UGL/@@download/ENCFF691UGL.bigBed hg19 released borderline replicate concordance, low read depth ENCFF110IXX bigBed narrowPeak peaks ENCSR119VCX ChIP-seq EFO:0002067 K562 cell line Homo sapiens PHF21A-human ENCAB814YYA DNA False 2017-09-28 ENCODE 1, 2 ENCFF452MJW 11210798 ENCODE Processing Pipeline 286b2755cdc959d4d5090763b5fd1e8e https://www.encodeproject.org/files/ENCFF110IXX/@@download/ENCFF110IXX.bigBed hg19 released borderline replicate concordance, low read depth ENCFF920GJD bigWig fold change over control ENCSR119VCX ChIP-seq EFO:0002067 K562 cell line Homo sapiens PHF21A-human ENCAB814YYA DNA False 2017-09-28 ENCODE 1 ENCFF262CJE, ENCFF359CBG, ENCFF506DFV 1476624387 ENCODE Processing Pipeline c423283d40537cebf57d743f8c84f9d0 https://www.encodeproject.org/files/ENCFF920GJD/@@download/ENCFF920GJD.bigWig hg19 released borderline replicate concordance, low read depth ENCFF485QME bigWig signal p-value ENCSR119VCX ChIP-seq EFO:0002067 K562 cell line Homo sapiens PHF21A-human ENCAB814YYA DNA False 2017-09-28 ENCODE 2 ENCFF262CJE, ENCFF376ISC, ENCFF506DFV 1069593313 ENCODE Processing Pipeline 29202c369d08cde5ddfa9a133b714872 https://www.encodeproject.org/files/ENCFF485QME/@@download/ENCFF485QME.bigWig hg19 released borderline replicate concordance, low read depth ENCFF468CTD bigWig signal p-value ENCSR119VCX ChIP-seq EFO:0002067 K562 cell line Homo sapiens PHF21A-human ENCAB814YYA DNA False 2017-09-28 ENCODE 1, 2 ENCFF262CJE, ENCFF359CBG, ENCFF376ISC, ENCFF506DFV 1418989245 ENCODE Processing Pipeline 642a17b36082226b474c53f6f6269274 https://www.encodeproject.org/files/ENCFF468CTD/@@download/ENCFF468CTD.bigWig hg19 released borderline replicate concordance, low read depth ENCFF267NEQ bigWig fold change over control ENCSR119VCX ChIP-seq EFO:0002067 K562 cell line Homo sapiens PHF21A-human ENCAB814YYA DNA False 2017-09-28 ENCODE 2 ENCFF262CJE, ENCFF376ISC, ENCFF506DFV 1199376719 ENCODE Processing Pipeline c94f2894ae6dd49e21b3427278bc5660 https://www.encodeproject.org/files/ENCFF267NEQ/@@download/ENCFF267NEQ.bigWig hg19 released borderline replicate concordance, low read depth ENCFF898ZKM bigBed narrowPeak optimal idr thresholded peaks ENCSR119VCX ChIP-seq EFO:0002067 K562 cell line Homo sapiens PHF21A-human ENCAB814YYA DNA False 2017-09-28 ENCODE 1, 2 ENCFF134CUM 342860 ENCODE Processing Pipeline 789895c5dafdb48d9850c6254304b8e0 https://www.encodeproject.org/files/ENCFF898ZKM/@@download/ENCFF898ZKM.bigBed hg19 released borderline replicate concordance, low read depth ENCFF700GJA bed narrowPeak peaks ENCSR119VCX ChIP-seq EFO:0002067 K562 cell line Homo sapiens PHF21A-human ENCAB814YYA DNA False 2017-09-28 ENCODE 2 ENCFF262CJE, ENCFF376ISC, ENCFF506DFV 6027086 ENCODE Processing Pipeline 60055a48f7ef98a96310305a307328a8 https://www.encodeproject.org/files/ENCFF700GJA/@@download/ENCFF700GJA.bed.gz hg19 released borderline replicate concordance, low read depth ENCFF452MJW bed narrowPeak peaks ENCSR119VCX ChIP-seq EFO:0002067 K562 cell line Homo sapiens PHF21A-human ENCAB814YYA DNA False 2017-09-28 ENCODE 1, 2 ENCFF262CJE, ENCFF359CBG, ENCFF376ISC, ENCFF506DFV 7115881 ENCODE Processing Pipeline f2569e17f766a5f544af46b5541d9070 https://www.encodeproject.org/files/ENCFF452MJW/@@download/ENCFF452MJW.bed.gz hg19 released borderline replicate concordance, low read depth ENCFF894CCA bed narrowPeak conservative idr thresholded peaks ENCSR119VCX ChIP-seq EFO:0002067 K562 cell line Homo sapiens PHF21A-human ENCAB814YYA DNA False 2017-09-28 ENCODE 1, 2 ENCFF001TDO, ENCFF452MJW, ENCFF700GJA, ENCFF776LQY 88402 ENCODE Processing Pipeline 44d8418e275e40560e9c250960008d40 https://www.encodeproject.org/files/ENCFF894CCA/@@download/ENCFF894CCA.bed.gz hg19 released borderline replicate concordance, low read depth ENCFF484KHM bigBed narrowPeak conservative idr thresholded peaks ENCSR119VCX ChIP-seq EFO:0002067 K562 cell line Homo sapiens PHF21A-human ENCAB814YYA DNA False 2017-09-28 ENCODE 1, 2 ENCFF894CCA 223408 ENCODE Processing Pipeline 758bf2a4a1cb14042da5a2515a884324 https://www.encodeproject.org/files/ENCFF484KHM/@@download/ENCFF484KHM.bigBed hg19 released borderline replicate concordance, low read depth ENCFF460YMQ bigWig signal p-value ENCSR119VCX ChIP-seq EFO:0002067 K562 cell line Homo sapiens PHF21A-human ENCAB814YYA DNA False 2017-09-28 ENCODE 1 ENCFF262CJE, ENCFF359CBG, ENCFF506DFV 1496461374 ENCODE Processing Pipeline 10fc50fec7e066190b5e9eea5c8e5388 https://www.encodeproject.org/files/ENCFF460YMQ/@@download/ENCFF460YMQ.bigWig hg19 released borderline replicate concordance, low read depth ENCFF134CUM bed narrowPeak optimal idr thresholded peaks ENCSR119VCX ChIP-seq EFO:0002067 K562 cell line Homo sapiens PHF21A-human ENCAB814YYA DNA False 2017-09-28 ENCODE 1, 2 ENCFF001TDO, ENCFF452MJW, ENCFF700GJA, ENCFF776LQY 168516 ENCODE Processing Pipeline b52e0fd32c00468eb65ad29e0e7bf9b6 https://www.encodeproject.org/files/ENCFF134CUM/@@download/ENCFF134CUM.bed.gz hg19 released borderline replicate concordance, low read depth ENCFF205NGG bigWig signal p-value ENCSR119VCX ChIP-seq EFO:0002067 K562 cell line Homo sapiens PHF21A-human ENCAB814YYA DNA False 2017-09-28 ENCODE 1 ENCFF357AUM, ENCFF720AUK, ENCFF796JTX 1502131627 ENCODE Processing Pipeline 92a8abf76a00c4fc6b27d9718c476f6e https://www.encodeproject.org/files/ENCFF205NGG/@@download/ENCFF205NGG.bigWig GRCh38 released borderline replicate concordance, low read depth ENCFF415VQG bigWig fold change over control ENCSR119VCX ChIP-seq EFO:0002067 K562 cell line Homo sapiens PHF21A-human ENCAB814YYA DNA False 2017-09-28 ENCODE 1 ENCFF357AUM, ENCFF720AUK, ENCFF796JTX 1475852732 ENCODE Processing Pipeline e0aa634252d314c23c25a3621a47541a https://www.encodeproject.org/files/ENCFF415VQG/@@download/ENCFF415VQG.bigWig GRCh38 released borderline replicate concordance, low read depth ENCFF813NNS bigBed narrowPeak peaks ENCSR119VCX ChIP-seq EFO:0002067 K562 cell line Homo sapiens PHF21A-human ENCAB814YYA DNA False 2017-09-28 ENCODE 1 ENCFF752LGN 11311591 ENCODE Processing Pipeline 2c0ce2026d544c755b86689b6bda7dd9 https://www.encodeproject.org/files/ENCFF813NNS/@@download/ENCFF813NNS.bigBed GRCh38 released borderline replicate concordance, low read depth ENCFF312VYQ bigBed narrowPeak peaks ENCSR119VCX ChIP-seq EFO:0002067 K562 cell line Homo sapiens PHF21A-human ENCAB814YYA DNA False 2017-09-28 ENCODE 2 ENCFF105HDV 11314754 ENCODE Processing Pipeline 058873e703974e46cd7fd88cbed7915d https://www.encodeproject.org/files/ENCFF312VYQ/@@download/ENCFF312VYQ.bigBed GRCh38 released borderline replicate concordance, low read depth ENCFF657UVA bed narrowPeak optimal idr thresholded peaks ENCSR119VCX ChIP-seq EFO:0002067 K562 cell line Homo sapiens PHF21A-human ENCAB814YYA DNA False 2017-09-28 ENCODE 1, 2 ENCFF105HDV, ENCFF419RSJ, ENCFF449ZGH, ENCFF752LGN 173527 ENCODE Processing Pipeline 3f01baa89ba091ecc16de02e36e27eb7 https://www.encodeproject.org/files/ENCFF657UVA/@@download/ENCFF657UVA.bed.gz GRCh38 released borderline replicate concordance, low read depth ENCFF944DOR bigWig signal p-value ENCSR119VCX ChIP-seq EFO:0002067 K562 cell line Homo sapiens PHF21A-human ENCAB814YYA DNA False 2017-09-28 ENCODE 2 ENCFF118SOA, ENCFF720AUK, ENCFF796JTX 1188372429 ENCODE Processing Pipeline 28bead8d276000ddaca562f61d9d5d4b https://www.encodeproject.org/files/ENCFF944DOR/@@download/ENCFF944DOR.bigWig GRCh38 released borderline replicate concordance, low read depth ENCFF200ADG bigWig signal p-value ENCSR119VCX ChIP-seq EFO:0002067 K562 cell line Homo sapiens PHF21A-human ENCAB814YYA DNA False 2017-09-28 ENCODE 1, 2 ENCFF118SOA, ENCFF357AUM, ENCFF720AUK, ENCFF796JTX 1695826377 ENCODE Processing Pipeline f715cf3c64554d86c53b6b874096e5fa https://www.encodeproject.org/files/ENCFF200ADG/@@download/ENCFF200ADG.bigWig GRCh38 released borderline replicate concordance, low read depth ENCFF711YOH bigWig fold change over control ENCSR119VCX ChIP-seq EFO:0002067 K562 cell line Homo sapiens PHF21A-human ENCAB814YYA DNA False 2017-09-28 ENCODE 2 ENCFF118SOA, ENCFF720AUK, ENCFF796JTX 1199807900 ENCODE Processing Pipeline d8d59dc6f288d44e8fcf20468ac3b0d2 https://www.encodeproject.org/files/ENCFF711YOH/@@download/ENCFF711YOH.bigWig GRCh38 released borderline replicate concordance, low read depth ENCFF752LGN bed narrowPeak peaks ENCSR119VCX ChIP-seq EFO:0002067 K562 cell line Homo sapiens PHF21A-human ENCAB814YYA DNA False 2017-09-28 ENCODE 1 ENCFF357AUM, ENCFF720AUK, ENCFF796JTX 6395742 ENCODE Processing Pipeline 51ce9167efdeec46dbd17ba6aa8ddd99 https://www.encodeproject.org/files/ENCFF752LGN/@@download/ENCFF752LGN.bed.gz GRCh38 released borderline replicate concordance, low read depth ENCFF745LZA bigBed narrowPeak optimal idr thresholded peaks ENCSR119VCX ChIP-seq EFO:0002067 K562 cell line Homo sapiens PHF21A-human ENCAB814YYA DNA False 2017-09-28 ENCODE 1, 2 ENCFF657UVA 352145 ENCODE Processing Pipeline 0ac4dc9ba3d91867cab232766c800be3 https://www.encodeproject.org/files/ENCFF745LZA/@@download/ENCFF745LZA.bigBed GRCh38 released borderline replicate concordance, low read depth ENCFF530LGP bigWig fold change over control ENCSR119VCX ChIP-seq EFO:0002067 K562 cell line Homo sapiens PHF21A-human ENCAB814YYA DNA False 2017-09-28 ENCODE 1, 2 ENCFF118SOA, ENCFF357AUM, ENCFF720AUK, ENCFF796JTX 1912305724 ENCODE Processing Pipeline b5576a515624ba5fcca851811fe6d7a1 https://www.encodeproject.org/files/ENCFF530LGP/@@download/ENCFF530LGP.bigWig GRCh38 released borderline replicate concordance, low read depth ENCFF449ZGH bed narrowPeak peaks ENCSR119VCX ChIP-seq EFO:0002067 K562 cell line Homo sapiens PHF21A-human ENCAB814YYA DNA False 2017-09-28 ENCODE 1, 2 ENCFF118SOA, ENCFF357AUM, ENCFF720AUK, ENCFF796JTX 7123226 ENCODE Processing Pipeline 5262583013b92fb96ccc6dd235ba1c79 https://www.encodeproject.org/files/ENCFF449ZGH/@@download/ENCFF449ZGH.bed.gz GRCh38 released borderline replicate concordance, low read depth ENCFF836PQF bigBed narrowPeak conservative idr thresholded peaks ENCSR119VCX ChIP-seq EFO:0002067 K562 cell line Homo sapiens PHF21A-human ENCAB814YYA DNA False 2017-09-28 ENCODE 1, 2 ENCFF552BXT 227204 ENCODE Processing Pipeline 991a24ca75e8687d6c72a696cf985775 https://www.encodeproject.org/files/ENCFF836PQF/@@download/ENCFF836PQF.bigBed GRCh38 released borderline replicate concordance, low read depth ENCFF105HDV bed narrowPeak peaks ENCSR119VCX ChIP-seq EFO:0002067 K562 cell line Homo sapiens PHF21A-human ENCAB814YYA DNA False 2017-09-28 ENCODE 2 ENCFF118SOA, ENCFF720AUK, ENCFF796JTX 6027540 ENCODE Processing Pipeline 203a769ce8e208987e231c59f399ef12 https://www.encodeproject.org/files/ENCFF105HDV/@@download/ENCFF105HDV.bed.gz GRCh38 released borderline replicate concordance, low read depth ENCFF552BXT bed narrowPeak conservative idr thresholded peaks ENCSR119VCX ChIP-seq EFO:0002067 K562 cell line Homo sapiens PHF21A-human ENCAB814YYA DNA False 2017-09-28 ENCODE 1, 2 ENCFF105HDV, ENCFF419RSJ, ENCFF449ZGH, ENCFF752LGN 89575 ENCODE Processing Pipeline f3e0cb76310aa8f95c8e906490a41b62 https://www.encodeproject.org/files/ENCFF552BXT/@@download/ENCFF552BXT.bed.gz GRCh38 released borderline replicate concordance, low read depth ENCFF379WBE bigBed narrowPeak peaks ENCSR119VCX ChIP-seq EFO:0002067 K562 cell line Homo sapiens PHF21A-human ENCAB814YYA DNA False 2017-09-28 ENCODE 1, 2 ENCFF449ZGH 11229744 ENCODE Processing Pipeline dcf62fc95018650af9b4799051164fb9 https://www.encodeproject.org/files/ENCFF379WBE/@@download/ENCFF379WBE.bigBed GRCh38 released borderline replicate concordance, low read depth ENCFF143IFX fastq reads ENCSR997NGQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens XRCC3-human ENCAB805XGD DNA False 2017-09-26 ENCODE 2 1 100 paired-ended 2 ENCFF356UYQ 3601510880 Michael Snyder, Stanford 8bbd30b9d7233ca34f502e17d20d4759 SRA:SRR6214324 https://www.encodeproject.org/files/ENCFF143IFX/@@download/ENCFF143IFX.fastq.gz Illumina HiSeq 4000 /files/ENCFF837MIV/ released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity ENCFF971OYB fastq reads ENCSR997NGQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens XRCC3-human ENCAB805XGD DNA False 2017-09-26 ENCODE 1 1 100 paired-ended 2 ENCFF898UXT 3513892406 Michael Snyder, Stanford adb15eb96de1f402662a7bc8b50c0ec3 SRA:SRR6214323 https://www.encodeproject.org/files/ENCFF971OYB/@@download/ENCFF971OYB.fastq.gz Illumina HiSeq 4000 /files/ENCFF502GTS/ released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity ENCFF356UYQ fastq reads ENCSR997NGQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens XRCC3-human ENCAB805XGD DNA False 2017-09-26 ENCODE 2 1 100 paired-ended 1 ENCFF143IFX 3341722102 Michael Snyder, Stanford 79c8e07fd247a5bc96775b2783e070ac SRA:SRR6214324 https://www.encodeproject.org/files/ENCFF356UYQ/@@download/ENCFF356UYQ.fastq.gz Illumina HiSeq 4000 /files/ENCFF259GQA/ released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity ENCFF898UXT fastq reads ENCSR997NGQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens XRCC3-human ENCAB805XGD DNA False 2017-09-26 ENCODE 1 1 100 paired-ended 1 ENCFF971OYB 3158317276 Michael Snyder, Stanford afbd0b15f1fe364a77c691fb5ea143ba SRA:SRR6214323 https://www.encodeproject.org/files/ENCFF898UXT/@@download/ENCFF898UXT.fastq.gz Illumina HiSeq 4000 /files/ENCFF498JMO/ released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity ENCFF446TXX bam unfiltered alignments ENCSR997NGQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens XRCC3-human ENCAB805XGD DNA False 2017-09-26 ENCODE 1 100 ENCFF643CGH, ENCFF898UXT, ENCFF971OYB 6342421681 ENCODE Processing Pipeline c73de1f93ce899d053c6a125b7dee14d https://www.encodeproject.org/files/ENCFF446TXX/@@download/ENCFF446TXX.bam GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity ENCFF187GKL bam unfiltered alignments ENCSR997NGQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens XRCC3-human ENCAB805XGD DNA False 2017-09-26 ENCODE 2 100 ENCFF143IFX, ENCFF356UYQ, ENCFF643CGH 6798984691 ENCODE Processing Pipeline 36319b87255c918b227500198a770269 https://www.encodeproject.org/files/ENCFF187GKL/@@download/ENCFF187GKL.bam GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity ENCFF786AAB bam unfiltered alignments ENCSR997NGQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens XRCC3-human ENCAB805XGD DNA False 2017-09-26 ENCODE 1 100 ENCFF807MUK, ENCFF898UXT, ENCFF971OYB 6336015080 ENCODE Processing Pipeline 80813d11dcb741e81258a3676f60bfce https://www.encodeproject.org/files/ENCFF786AAB/@@download/ENCFF786AAB.bam hg19 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity ENCFF200ZYF bam unfiltered alignments ENCSR997NGQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens XRCC3-human ENCAB805XGD DNA False 2017-09-26 ENCODE 2 100 ENCFF143IFX, ENCFF356UYQ, ENCFF807MUK 6788225711 ENCODE Processing Pipeline 0e20cf4d74ea89729a332fecd6715f2e https://www.encodeproject.org/files/ENCFF200ZYF/@@download/ENCFF200ZYF.bam hg19 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity ENCFF723BUZ bam alignments ENCSR997NGQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens XRCC3-human ENCAB805XGD DNA False 2017-09-26 ENCODE 1 100 ENCFF643CGH, ENCFF898UXT, ENCFF971OYB 4306488549 ENCODE Processing Pipeline cbef63f55eda36d139febdc1659b7506 https://www.encodeproject.org/files/ENCFF723BUZ/@@download/ENCFF723BUZ.bam GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity ENCFF226SMC bam alignments ENCSR997NGQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens XRCC3-human ENCAB805XGD DNA False 2017-09-26 ENCODE 1 100 ENCFF807MUK, ENCFF898UXT, ENCFF971OYB 4303131168 ENCODE Processing Pipeline f4b736b750aa6417eda456482809a68d https://www.encodeproject.org/files/ENCFF226SMC/@@download/ENCFF226SMC.bam hg19 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity ENCFF739YFP bam alignments ENCSR997NGQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens XRCC3-human ENCAB805XGD DNA False 2017-09-26 ENCODE 2 100 ENCFF143IFX, ENCFF356UYQ, ENCFF643CGH 5422320753 ENCODE Processing Pipeline dcc967b32da0fa3d6fbca2e1a09cfc6f https://www.encodeproject.org/files/ENCFF739YFP/@@download/ENCFF739YFP.bam GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity ENCFF106KDN bam alignments ENCSR997NGQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens XRCC3-human ENCAB805XGD DNA False 2017-09-26 ENCODE 2 100 ENCFF143IFX, ENCFF356UYQ, ENCFF807MUK 5418120683 ENCODE Processing Pipeline dcad086603206babe97eeffd9c966500 https://www.encodeproject.org/files/ENCFF106KDN/@@download/ENCFF106KDN.bam hg19 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity ENCFF263JGK bigWig signal p-value ENCSR997NGQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens XRCC3-human ENCAB805XGD DNA False 2017-09-26 ENCODE 1 ENCFF160VXC, ENCFF226SMC 1258321710 ENCODE Processing Pipeline e702ef118502375a5079527f81515795 https://www.encodeproject.org/files/ENCFF263JGK/@@download/ENCFF263JGK.bigWig hg19 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity ENCFF570EZT bigWig signal p-value ENCSR997NGQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens XRCC3-human ENCAB805XGD DNA False 2017-09-26 ENCODE 2 ENCFF106KDN, ENCFF160VXC, ENCFF834TUP 1889233015 ENCODE Processing Pipeline 42b0a65c5fc149a7a4ec24342465f2b4 https://www.encodeproject.org/files/ENCFF570EZT/@@download/ENCFF570EZT.bigWig hg19 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity ENCFF075PMZ bigWig signal p-value ENCSR997NGQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens XRCC3-human ENCAB805XGD DNA False 2017-09-26 ENCODE 1, 2 ENCFF106KDN, ENCFF160VXC, ENCFF226SMC, ENCFF834TUP 1812938139 ENCODE Processing Pipeline 07d49eadf53c925a8af73da78f84e8d9 https://www.encodeproject.org/files/ENCFF075PMZ/@@download/ENCFF075PMZ.bigWig hg19 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity ENCFF281MXB bigWig fold change over control ENCSR997NGQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens XRCC3-human ENCAB805XGD DNA False 2017-09-26 ENCODE 1 ENCFF160VXC, ENCFF226SMC 1385714319 ENCODE Processing Pipeline 8acb933eda9f3e1a95769d85db77da84 https://www.encodeproject.org/files/ENCFF281MXB/@@download/ENCFF281MXB.bigWig hg19 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity ENCFF067SYA bigWig fold change over control ENCSR997NGQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens XRCC3-human ENCAB805XGD DNA False 2017-09-26 ENCODE 2 ENCFF106KDN, ENCFF160VXC, ENCFF834TUP 2030876348 ENCODE Processing Pipeline e43c7e5266d0975438a6297c25e0f604 https://www.encodeproject.org/files/ENCFF067SYA/@@download/ENCFF067SYA.bigWig hg19 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity ENCFF660YEV bigWig fold change over control ENCSR997NGQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens XRCC3-human ENCAB805XGD DNA False 2017-09-26 ENCODE 1, 2 ENCFF106KDN, ENCFF160VXC, ENCFF226SMC, ENCFF834TUP 2493538387 ENCODE Processing Pipeline fc48333f3244200b2c6768b1004d83ae https://www.encodeproject.org/files/ENCFF660YEV/@@download/ENCFF660YEV.bigWig hg19 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity ENCFF784XMU bed narrowPeak peaks ENCSR997NGQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens XRCC3-human ENCAB805XGD DNA False 2017-09-26 ENCODE 1 ENCFF160VXC, ENCFF226SMC 6488413 ENCODE Processing Pipeline 09e5fc32e677c4cee92b4bf569370a99 https://www.encodeproject.org/files/ENCFF784XMU/@@download/ENCFF784XMU.bed.gz hg19 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity ENCFF603XIY bed narrowPeak peaks ENCSR997NGQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens XRCC3-human ENCAB805XGD DNA False 2017-09-26 ENCODE 2 ENCFF106KDN, ENCFF160VXC, ENCFF834TUP 6995126 ENCODE Processing Pipeline 14fccdac275608c4c8aa56ebb80e9e48 https://www.encodeproject.org/files/ENCFF603XIY/@@download/ENCFF603XIY.bed.gz hg19 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity ENCFF676YFV bed narrowPeak peaks ENCSR997NGQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens XRCC3-human ENCAB805XGD DNA False 2017-09-26 ENCODE 1, 2 ENCFF106KDN, ENCFF160VXC, ENCFF226SMC, ENCFF834TUP 7220240 ENCODE Processing Pipeline 2a610860ec43ebdce30569cac29b1b1a https://www.encodeproject.org/files/ENCFF676YFV/@@download/ENCFF676YFV.bed.gz hg19 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity ENCFF008UVL bigBed narrowPeak peaks ENCSR997NGQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens XRCC3-human ENCAB805XGD DNA False 2017-09-26 ENCODE 1 ENCFF784XMU 10939976 ENCODE Processing Pipeline 9b46c18e5f3914df637c991250282ddd https://www.encodeproject.org/files/ENCFF008UVL/@@download/ENCFF008UVL.bigBed hg19 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity ENCFF430AIQ bigBed narrowPeak peaks ENCSR997NGQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens XRCC3-human ENCAB805XGD DNA False 2017-09-26 ENCODE 1, 2 ENCFF676YFV 10952571 ENCODE Processing Pipeline b0bb42fe3eae7b0636dfd8355a7b94b2 https://www.encodeproject.org/files/ENCFF430AIQ/@@download/ENCFF430AIQ.bigBed hg19 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity ENCFF877SUN bigBed narrowPeak peaks ENCSR997NGQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens XRCC3-human ENCAB805XGD DNA False 2017-09-26 ENCODE 2 ENCFF603XIY 11003232 ENCODE Processing Pipeline 23abab00ad6481f78f74db357da6208b https://www.encodeproject.org/files/ENCFF877SUN/@@download/ENCFF877SUN.bigBed hg19 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity ENCFF667ODA bed narrowPeak conservative idr thresholded peaks ENCSR997NGQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens XRCC3-human ENCAB805XGD DNA False 2017-09-26 ENCODE 1, 2 ENCFF001TDO, ENCFF603XIY, ENCFF676YFV, ENCFF784XMU 18963 ENCODE Processing Pipeline b9517d8987f956c2273e9b4b336cb1f1 https://www.encodeproject.org/files/ENCFF667ODA/@@download/ENCFF667ODA.bed.gz hg19 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity ENCFF265SHZ bigBed narrowPeak conservative idr thresholded peaks ENCSR997NGQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens XRCC3-human ENCAB805XGD DNA False 2017-09-26 ENCODE 1, 2 ENCFF667ODA 96836 ENCODE Processing Pipeline 510da9e190ba05ee70e44f3aaf994f12 https://www.encodeproject.org/files/ENCFF265SHZ/@@download/ENCFF265SHZ.bigBed hg19 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity ENCFF803LEC bed narrowPeak optimal idr thresholded peaks ENCSR997NGQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens XRCC3-human ENCAB805XGD DNA False 2017-09-26 ENCODE 1, 2 ENCFF001TDO, ENCFF603XIY, ENCFF676YFV, ENCFF784XMU 39105 ENCODE Processing Pipeline c972881736ef420770b268a96d13b327 https://www.encodeproject.org/files/ENCFF803LEC/@@download/ENCFF803LEC.bed.gz hg19 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity ENCFF854LUC bigBed narrowPeak optimal idr thresholded peaks ENCSR997NGQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens XRCC3-human ENCAB805XGD DNA False 2017-09-26 ENCODE 1, 2 ENCFF803LEC 133409 ENCODE Processing Pipeline f8f3907fe68c7e7af98c6659e1dce9ac https://www.encodeproject.org/files/ENCFF854LUC/@@download/ENCFF854LUC.bigBed hg19 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity ENCFF832KKY bigWig signal p-value ENCSR997NGQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens XRCC3-human ENCAB805XGD DNA False 2017-09-26 ENCODE 1 ENCFF723BUZ, ENCFF790TAN 1347660008 ENCODE Processing Pipeline 058da8ab0a2bb28df4fd2a07c250ec3f https://www.encodeproject.org/files/ENCFF832KKY/@@download/ENCFF832KKY.bigWig GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity ENCFF503ZCH bigWig signal p-value ENCSR997NGQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens XRCC3-human ENCAB805XGD DNA False 2017-09-26 ENCODE 2 ENCFF712WXB, ENCFF739YFP, ENCFF790TAN 1834284385 ENCODE Processing Pipeline 4dbe1df05ccc93d9a6e18b475c8ccca9 https://www.encodeproject.org/files/ENCFF503ZCH/@@download/ENCFF503ZCH.bigWig GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity ENCFF413BEJ bigWig signal p-value ENCSR997NGQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens XRCC3-human ENCAB805XGD DNA False 2017-09-26 ENCODE 1, 2 ENCFF712WXB, ENCFF723BUZ, ENCFF739YFP, ENCFF790TAN 1880485215 ENCODE Processing Pipeline e4378cc637ade1337e87f5aa6dcbe110 https://www.encodeproject.org/files/ENCFF413BEJ/@@download/ENCFF413BEJ.bigWig GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity ENCFF384NXB bigWig fold change over control ENCSR997NGQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens XRCC3-human ENCAB805XGD DNA False 2017-09-26 ENCODE 1 ENCFF723BUZ, ENCFF790TAN 1382122747 ENCODE Processing Pipeline d589678637214d5248e16062d97949c5 https://www.encodeproject.org/files/ENCFF384NXB/@@download/ENCFF384NXB.bigWig GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity ENCFF117KNW bigWig fold change over control ENCSR997NGQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens XRCC3-human ENCAB805XGD DNA False 2017-09-26 ENCODE 2 ENCFF712WXB, ENCFF739YFP, ENCFF790TAN 2023569839 ENCODE Processing Pipeline 9401afebc73b87daf31ef9c07b575ac6 https://www.encodeproject.org/files/ENCFF117KNW/@@download/ENCFF117KNW.bigWig GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity ENCFF521HWT bigWig fold change over control ENCSR997NGQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens XRCC3-human ENCAB805XGD DNA False 2017-09-26 ENCODE 1, 2 ENCFF712WXB, ENCFF723BUZ, ENCFF739YFP, ENCFF790TAN 2496841695 ENCODE Processing Pipeline 197fe43e49ac77db69bb2f0614eb04a1 https://www.encodeproject.org/files/ENCFF521HWT/@@download/ENCFF521HWT.bigWig GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity ENCFF964VWO bed narrowPeak peaks ENCSR997NGQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens XRCC3-human ENCAB805XGD DNA False 2017-09-26 ENCODE 1, 2 ENCFF712WXB, ENCFF723BUZ, ENCFF739YFP, ENCFF790TAN 7209786 ENCODE Processing Pipeline eecb745436680969948cef308f49041e https://www.encodeproject.org/files/ENCFF964VWO/@@download/ENCFF964VWO.bed.gz GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity ENCFF676DGQ bed narrowPeak peaks ENCSR997NGQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens XRCC3-human ENCAB805XGD DNA False 2017-09-26 ENCODE 1 ENCFF723BUZ, ENCFF790TAN 6298663 ENCODE Processing Pipeline 5a83a048d4c41c21d5e0b71e55e1248f https://www.encodeproject.org/files/ENCFF676DGQ/@@download/ENCFF676DGQ.bed.gz GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity ENCFF613XJM bed narrowPeak peaks ENCSR997NGQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens XRCC3-human ENCAB805XGD DNA False 2017-09-26 ENCODE 2 ENCFF712WXB, ENCFF739YFP, ENCFF790TAN 6930134 ENCODE Processing Pipeline 37883be3cb569f2e75e6b9e1557de5d4 https://www.encodeproject.org/files/ENCFF613XJM/@@download/ENCFF613XJM.bed.gz GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity ENCFF495CMT bigBed narrowPeak peaks ENCSR997NGQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens XRCC3-human ENCAB805XGD DNA False 2017-09-26 ENCODE 2 ENCFF613XJM 11014475 ENCODE Processing Pipeline 6589eb2ac592005afd686d1252d9cec7 https://www.encodeproject.org/files/ENCFF495CMT/@@download/ENCFF495CMT.bigBed GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity ENCFF095COA bigBed narrowPeak peaks ENCSR997NGQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens XRCC3-human ENCAB805XGD DNA False 2017-09-26 ENCODE 1 ENCFF676DGQ 10939742 ENCODE Processing Pipeline e566101968a287d810901160679b552a https://www.encodeproject.org/files/ENCFF095COA/@@download/ENCFF095COA.bigBed GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity ENCFF086ZSD bed narrowPeak conservative idr thresholded peaks ENCSR997NGQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens XRCC3-human ENCAB805XGD DNA False 2017-09-26 ENCODE 1, 2 ENCFF419RSJ, ENCFF613XJM, ENCFF676DGQ, ENCFF964VWO 19223 ENCODE Processing Pipeline 7a6c934a12686e635d1f922cf233a2ec https://www.encodeproject.org/files/ENCFF086ZSD/@@download/ENCFF086ZSD.bed.gz GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity ENCFF574DVM bigBed narrowPeak peaks ENCSR997NGQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens XRCC3-human ENCAB805XGD DNA False 2017-09-26 ENCODE 1, 2 ENCFF964VWO 10965539 ENCODE Processing Pipeline da2780bd24d2b858c6089c77cc69d105 https://www.encodeproject.org/files/ENCFF574DVM/@@download/ENCFF574DVM.bigBed GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity ENCFF023NGQ bigBed narrowPeak conservative idr thresholded peaks ENCSR997NGQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens XRCC3-human ENCAB805XGD DNA False 2017-09-26 ENCODE 1, 2 ENCFF086ZSD 99301 ENCODE Processing Pipeline 06b701c695b774d857cf4a559a4fe02a https://www.encodeproject.org/files/ENCFF023NGQ/@@download/ENCFF023NGQ.bigBed GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity ENCFF115PGE bed narrowPeak optimal idr thresholded peaks ENCSR997NGQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens XRCC3-human ENCAB805XGD DNA False 2017-09-26 ENCODE 1, 2 ENCFF419RSJ, ENCFF613XJM, ENCFF676DGQ, ENCFF964VWO 37362 ENCODE Processing Pipeline 8417a885ff667abd50e5bd69ad63d1bd https://www.encodeproject.org/files/ENCFF115PGE/@@download/ENCFF115PGE.bed.gz GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity ENCFF949RXP bigBed narrowPeak optimal idr thresholded peaks ENCSR997NGQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens XRCC3-human ENCAB805XGD DNA False 2017-09-26 ENCODE 1, 2 ENCFF115PGE 132162 ENCODE Processing Pipeline 373caa559b4b70e31627d59021e92b26 https://www.encodeproject.org/files/ENCFF949RXP/@@download/ENCFF949RXP.bigBed GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity ENCFF000QAH bam alignments ENCSR000BLO ChIP-seq EFO:0002067 K562 cell line Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 1 ENCFF000QAQ 466328611 Richard Myers, HAIB 020e910936b56863f515acbda2f87fda https://www.encodeproject.org/files/ENCFF000QAH/@@download/ENCFF000QAH.bam hg19 archived mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, poor library complexity, insufficient read depth, severe bottlenecking ENCFF000QAI bigBed broadPeak peaks ENCSR000BLO ChIP-seq EFO:0002067 K562 cell line Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 1 1 ENCFF001UJZ 423722 Richard Myers, HAIB bf49644be3d57182dd1ae7661925829b https://www.encodeproject.org/files/ENCFF000QAI/@@download/ENCFF000QAI.bigBed hg19 archived mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, poor library complexity, insufficient read depth, severe bottlenecking ENCFF000QAJ bigBed broadPeak peaks ENCSR000BLO ChIP-seq EFO:0002067 K562 cell line Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 2 1 ENCFF001UKA 434312 Richard Myers, HAIB 68278717a52e845e0dc221166d569d5b https://www.encodeproject.org/files/ENCFF000QAJ/@@download/ENCFF000QAJ.bigBed hg19 archived mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, poor library complexity, insufficient read depth, severe bottlenecking ENCFF000QAK bam alignments ENCSR000BLO ChIP-seq EFO:0002067 K562 cell line Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 2 ENCFF000QAV 717277101 Richard Myers, HAIB ed059f9d80a3e2b893bfd5bcddde74f5 https://www.encodeproject.org/files/ENCFF000QAK/@@download/ENCFF000QAK.bam hg19 archived mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, poor library complexity, insufficient read depth, severe bottlenecking ENCFF000QAM bigWig raw signal ENCSR000BLO ChIP-seq EFO:0002067 K562 cell line Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 1 1 13046844 Richard Myers, HAIB d2aa330a4f0d2601c8ca4004fe88fb1b https://www.encodeproject.org/files/ENCFF000QAM/@@download/ENCFF000QAM.bigWig hg19 archived mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample, missing derived_from control insufficient read depth, poor library complexity, insufficient read depth, severe bottlenecking ENCFF000QAO bigWig raw signal ENCSR000BLO ChIP-seq EFO:0002067 K562 cell line Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 2 1 28268488 Richard Myers, HAIB d6e4a38d48b13f2e91d8dd0ce0723000 https://www.encodeproject.org/files/ENCFF000QAO/@@download/ENCFF000QAO.bigWig hg19 archived mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample, missing derived_from control insufficient read depth, poor library complexity, insufficient read depth, severe bottlenecking ENCFF000QAQ fastq reads ENCSR000BLO ChIP-seq EFO:0002067 K562 cell line Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 1 1 36 single-ended 467330636 Richard Myers, HAIB 5ae5c846ee52c3cc15fbab7444ebe6ff https://www.encodeproject.org/files/ENCFF000QAQ/@@download/ENCFF000QAQ.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000QEX/ released mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, poor library complexity, insufficient read depth, severe bottlenecking ENCFF000QAV fastq reads ENCSR000BLO ChIP-seq EFO:0002067 K562 cell line Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 2 1 36 single-ended 786381143 Richard Myers, HAIB 46ab0ad46878a180cfd0c571e4afd7a0 https://www.encodeproject.org/files/ENCFF000QAV/@@download/ENCFF000QAV.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000QEX/ released mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, poor library complexity, insufficient read depth, severe bottlenecking ENCFF001UJZ bed broadPeak peaks ENCSR000BLO ChIP-seq EFO:0002067 K562 cell line Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 1 1 204699 Richard Myers, HAIB 0cb8237b6fb91cc17841d9c5bedd989f https://www.encodeproject.org/files/ENCFF001UJZ/@@download/ENCFF001UJZ.bed.gz hg19 archived mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample, missing derived_from control insufficient read depth, poor library complexity, insufficient read depth, severe bottlenecking ENCFF001UKA bed broadPeak peaks ENCSR000BLO ChIP-seq EFO:0002067 K562 cell line Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 2 1 245856 Richard Myers, HAIB afa750ef05c8e8ec1aa7e1a43c5af754 https://www.encodeproject.org/files/ENCFF001UKA/@@download/ENCFF001UKA.bed.gz hg19 archived mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample, missing derived_from control insufficient read depth, poor library complexity, insufficient read depth, severe bottlenecking ENCFF002CLZ bed narrowPeak optimal idr thresholded peaks ENCSR000BLO ChIP-seq EFO:0002067 K562 cell line Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 290707 ENCODE Consortium Analysis Working Group e81f2714fb61f80af419bc5e45682868 https://www.encodeproject.org/files/ENCFF002CLZ/@@download/ENCFF002CLZ.bed.gz hg19 archived mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample, missing derived_from control insufficient read depth, poor library complexity, insufficient read depth, severe bottlenecking ENCFF612ERP bigBed narrowPeak optimal idr thresholded peaks ENCSR000BLO ChIP-seq EFO:0002067 K562 cell line Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE ENCFF002CLZ 582996 ENCODE Consortium 5afaa5b21f1a9a388198443399f9f1ed https://www.encodeproject.org/files/ENCFF612ERP/@@download/ENCFF612ERP.bigBed hg19 archived mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, poor library complexity, insufficient read depth, severe bottlenecking ENCFF351CRO bam unfiltered alignments ENCSR000BLO ChIP-seq EFO:0002067 K562 cell line Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000QAQ, ENCFF643CGH 597085098 ENCODE Processing Pipeline c1122d659fcf4f013a953b93a8348c17 https://www.encodeproject.org/files/ENCFF351CRO/@@download/ENCFF351CRO.bam GRCh38 released mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, poor library complexity, insufficient read depth, severe bottlenecking ENCFF902IUF bam alignments ENCSR000BLO ChIP-seq EFO:0002067 K562 cell line Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000QAQ, ENCFF643CGH 303854787 ENCODE Processing Pipeline 0b7d97e48aed00e6f4753a3cfdf40906 https://www.encodeproject.org/files/ENCFF902IUF/@@download/ENCFF902IUF.bam GRCh38 released mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, poor library complexity, insufficient read depth, severe bottlenecking ENCFF603XOJ bam alignments ENCSR000BLO ChIP-seq EFO:0002067 K562 cell line Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000QAV, ENCFF643CGH 233791591 ENCODE Processing Pipeline c2640c58a8cf7ace101536ea8da8f1c7 https://www.encodeproject.org/files/ENCFF603XOJ/@@download/ENCFF603XOJ.bam GRCh38 released mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, poor library complexity, insufficient read depth, severe bottlenecking ENCFF073NRB bam unfiltered alignments ENCSR000BLO ChIP-seq EFO:0002067 K562 cell line Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000QAV, ENCFF643CGH 882019825 ENCODE Processing Pipeline 8abf72005e30dd3c67bcfe55984b76c9 https://www.encodeproject.org/files/ENCFF073NRB/@@download/ENCFF073NRB.bam GRCh38 released mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, poor library complexity, insufficient read depth, severe bottlenecking ENCFF100PUI bam unfiltered alignments ENCSR000BLO ChIP-seq EFO:0002067 K562 cell line Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000QAQ, ENCFF807MUK 596186911 ENCODE Processing Pipeline 118e048f9405cd4e076c2ce30bd6f254 https://www.encodeproject.org/files/ENCFF100PUI/@@download/ENCFF100PUI.bam hg19 released mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, poor library complexity, insufficient read depth, severe bottlenecking ENCFF538JCZ bam alignments ENCSR000BLO ChIP-seq EFO:0002067 K562 cell line Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000QAQ, ENCFF807MUK 304054813 ENCODE Processing Pipeline 7525eba97ed590f1de5640cb687d7a12 https://www.encodeproject.org/files/ENCFF538JCZ/@@download/ENCFF538JCZ.bam hg19 released mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, poor library complexity, insufficient read depth, severe bottlenecking ENCFF633ZKV bam unfiltered alignments ENCSR000BLO ChIP-seq EFO:0002067 K562 cell line Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000QAV, ENCFF807MUK 881245326 ENCODE Processing Pipeline cb44604dd05588cf62993d837c1bf08e https://www.encodeproject.org/files/ENCFF633ZKV/@@download/ENCFF633ZKV.bam hg19 released mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, poor library complexity, insufficient read depth, severe bottlenecking ENCFF175EOK bam alignments ENCSR000BLO ChIP-seq EFO:0002067 K562 cell line Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000QAV, ENCFF807MUK 233968251 ENCODE Processing Pipeline aeb8475817d5c22fd20e0b14e59a6cdd https://www.encodeproject.org/files/ENCFF175EOK/@@download/ENCFF175EOK.bam hg19 released mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, poor library complexity, insufficient read depth, severe bottlenecking ENCFF174ZDJ bigWig signal p-value ENCSR000BLO ChIP-seq EFO:0002067 K562 cell line Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 1 ENCFF772PJM, ENCFF902IUF 171945906 ENCODE Processing Pipeline c753d22f627449f8e5228333c5cda158 https://www.encodeproject.org/files/ENCFF174ZDJ/@@download/ENCFF174ZDJ.bigWig GRCh38 released mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, poor library complexity, insufficient read depth, severe bottlenecking ENCFF999FGE bigWig fold change over control ENCSR000BLO ChIP-seq EFO:0002067 K562 cell line Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 1 ENCFF772PJM, ENCFF902IUF 130670411 ENCODE Processing Pipeline 119e7d0c95d88f999500b1975e5c192e https://www.encodeproject.org/files/ENCFF999FGE/@@download/ENCFF999FGE.bigWig GRCh38 released mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, poor library complexity, insufficient read depth, severe bottlenecking ENCFF908PGZ bigWig fold change over control ENCSR000BLO ChIP-seq EFO:0002067 K562 cell line Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF603XOJ, ENCFF772PJM, ENCFF902IUF 213398081 ENCODE Processing Pipeline 1a0aa0d36d7dd0fd3ed4572e8c604505 https://www.encodeproject.org/files/ENCFF908PGZ/@@download/ENCFF908PGZ.bigWig GRCh38 released mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, poor library complexity, insufficient read depth, severe bottlenecking ENCFF455RYT bigWig signal p-value ENCSR000BLO ChIP-seq EFO:0002067 K562 cell line Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 2 ENCFF603XOJ, ENCFF772PJM 180241985 ENCODE Processing Pipeline 5e86af15e17c2639736ee4a99362adf7 https://www.encodeproject.org/files/ENCFF455RYT/@@download/ENCFF455RYT.bigWig GRCh38 released mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, poor library complexity, insufficient read depth, severe bottlenecking ENCFF883TBT bigWig fold change over control ENCSR000BLO ChIP-seq EFO:0002067 K562 cell line Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 2 ENCFF603XOJ, ENCFF772PJM 99777156 ENCODE Processing Pipeline 55c657562805a2fd5d72267a86331c4a https://www.encodeproject.org/files/ENCFF883TBT/@@download/ENCFF883TBT.bigWig GRCh38 released mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, poor library complexity, insufficient read depth, severe bottlenecking ENCFF781AWX bed narrowPeak peaks ENCSR000BLO ChIP-seq EFO:0002067 K562 cell line Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF603XOJ, ENCFF772PJM, ENCFF902IUF 4583450 ENCODE Processing Pipeline 2b4e0cbe56a01e79132a5d60ffa468fd https://www.encodeproject.org/files/ENCFF781AWX/@@download/ENCFF781AWX.bed.gz GRCh38 released mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, poor library complexity, insufficient read depth, severe bottlenecking ENCFF940QSW bigBed narrowPeak conservative idr thresholded peaks ENCSR000BLO ChIP-seq EFO:0002067 K562 cell line Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF554UPA 426468 ENCODE Processing Pipeline 2f7cee61c36c0bb0492e94c1f13c6c4b https://www.encodeproject.org/files/ENCFF940QSW/@@download/ENCFF940QSW.bigBed GRCh38 released mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, poor library complexity, insufficient read depth, severe bottlenecking ENCFF124HAC bed narrowPeak optimal idr thresholded peaks ENCSR000BLO ChIP-seq EFO:0002067 K562 cell line Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF210BNW, ENCFF419RSJ, ENCFF507LZF, ENCFF781AWX 261370 ENCODE Processing Pipeline 02eada5e9e0de75b0ff67b7d443fead1 https://www.encodeproject.org/files/ENCFF124HAC/@@download/ENCFF124HAC.bed.gz GRCh38 released mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, poor library complexity, insufficient read depth, severe bottlenecking ENCFF025QZU bigWig signal p-value ENCSR000BLO ChIP-seq EFO:0002067 K562 cell line Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF603XOJ, ENCFF772PJM, ENCFF902IUF 209106168 ENCODE Processing Pipeline 091d27dfc4e0aa87fce4eef627553317 https://www.encodeproject.org/files/ENCFF025QZU/@@download/ENCFF025QZU.bigWig GRCh38 released mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, poor library complexity, insufficient read depth, severe bottlenecking ENCFF507LZF bed narrowPeak peaks ENCSR000BLO ChIP-seq EFO:0002067 K562 cell line Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 1 ENCFF772PJM, ENCFF902IUF 2539837 ENCODE Processing Pipeline 6321a82df6d44d9c955c6489ac010538 https://www.encodeproject.org/files/ENCFF507LZF/@@download/ENCFF507LZF.bed.gz GRCh38 released mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, poor library complexity, insufficient read depth, severe bottlenecking ENCFF210BNW bed narrowPeak peaks ENCSR000BLO ChIP-seq EFO:0002067 K562 cell line Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 2 ENCFF603XOJ, ENCFF772PJM 3427898 ENCODE Processing Pipeline e6208db8813379fbb61864602f00cb73 https://www.encodeproject.org/files/ENCFF210BNW/@@download/ENCFF210BNW.bed.gz GRCh38 released mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, poor library complexity, insufficient read depth, severe bottlenecking ENCFF087NMZ bigBed narrowPeak peaks ENCSR000BLO ChIP-seq EFO:0002067 K562 cell line Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 1 ENCFF507LZF 5130893 ENCODE Processing Pipeline 2b921bb91e37001557340ca1140d7049 https://www.encodeproject.org/files/ENCFF087NMZ/@@download/ENCFF087NMZ.bigBed GRCh38 released mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, poor library complexity, insufficient read depth, severe bottlenecking ENCFF634BLI bigBed narrowPeak peaks ENCSR000BLO ChIP-seq EFO:0002067 K562 cell line Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 2 ENCFF210BNW 7655795 ENCODE Processing Pipeline 517652c08a2ec060475fefe3b088d3fc https://www.encodeproject.org/files/ENCFF634BLI/@@download/ENCFF634BLI.bigBed GRCh38 released mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, poor library complexity, insufficient read depth, severe bottlenecking ENCFF611XXI bigBed narrowPeak peaks ENCSR000BLO ChIP-seq EFO:0002067 K562 cell line Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF781AWX 10170809 ENCODE Processing Pipeline bce7f00f9ce0622dab35ff5e5935af47 https://www.encodeproject.org/files/ENCFF611XXI/@@download/ENCFF611XXI.bigBed GRCh38 released mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, poor library complexity, insufficient read depth, severe bottlenecking ENCFF554UPA bed narrowPeak conservative idr thresholded peaks ENCSR000BLO ChIP-seq EFO:0002067 K562 cell line Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF210BNW, ENCFF419RSJ, ENCFF507LZF, ENCFF781AWX 192917 ENCODE Processing Pipeline 7680f41509e7f77365503fb5992ddfc0 https://www.encodeproject.org/files/ENCFF554UPA/@@download/ENCFF554UPA.bed.gz GRCh38 released mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, poor library complexity, insufficient read depth, severe bottlenecking ENCFF155CBK bigBed narrowPeak optimal idr thresholded peaks ENCSR000BLO ChIP-seq EFO:0002067 K562 cell line Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF124HAC 527540 ENCODE Processing Pipeline d5ff1e57829ea1e5da07e258c1b3f56f https://www.encodeproject.org/files/ENCFF155CBK/@@download/ENCFF155CBK.bigBed GRCh38 released mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, poor library complexity, insufficient read depth, severe bottlenecking ENCFF261RIX bigWig signal p-value ENCSR000BLO ChIP-seq EFO:0002067 K562 cell line Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 2 ENCFF175EOK, ENCFF750MIM 207196241 ENCODE Processing Pipeline 19978d2f9f8272a79b0a5b4336c977b9 https://www.encodeproject.org/files/ENCFF261RIX/@@download/ENCFF261RIX.bigWig hg19 released mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, poor library complexity, insufficient read depth, severe bottlenecking ENCFF913NUW bigWig signal p-value ENCSR000BLO ChIP-seq EFO:0002067 K562 cell line Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 1 ENCFF538JCZ, ENCFF750MIM 235156079 ENCODE Processing Pipeline c34b605752312ee2aedb82fb332f7a3f https://www.encodeproject.org/files/ENCFF913NUW/@@download/ENCFF913NUW.bigWig hg19 released mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, poor library complexity, insufficient read depth, severe bottlenecking ENCFF649CUE bigWig signal p-value ENCSR000BLO ChIP-seq EFO:0002067 K562 cell line Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF175EOK, ENCFF538JCZ, ENCFF750MIM 209162414 ENCODE Processing Pipeline b620bfe94044dd21d009ab8a71f08027 https://www.encodeproject.org/files/ENCFF649CUE/@@download/ENCFF649CUE.bigWig hg19 released mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, poor library complexity, insufficient read depth, severe bottlenecking ENCFF704RCT bigWig fold change over control ENCSR000BLO ChIP-seq EFO:0002067 K562 cell line Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 2 ENCFF175EOK, ENCFF750MIM 99384579 ENCODE Processing Pipeline c6002edea29377ba78294be0a9a03c7f https://www.encodeproject.org/files/ENCFF704RCT/@@download/ENCFF704RCT.bigWig hg19 released mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, poor library complexity, insufficient read depth, severe bottlenecking ENCFF204SDM bigWig fold change over control ENCSR000BLO ChIP-seq EFO:0002067 K562 cell line Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 1 ENCFF538JCZ, ENCFF750MIM 129696440 ENCODE Processing Pipeline 4d28f52bc249e8704355cbdf705961be https://www.encodeproject.org/files/ENCFF204SDM/@@download/ENCFF204SDM.bigWig hg19 released mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, poor library complexity, insufficient read depth, severe bottlenecking ENCFF442HXQ bed narrowPeak peaks ENCSR000BLO ChIP-seq EFO:0002067 K562 cell line Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF175EOK, ENCFF538JCZ, ENCFF750MIM 4626126 ENCODE Processing Pipeline 58f92d989bf4eaa67d8dd540807e2815 https://www.encodeproject.org/files/ENCFF442HXQ/@@download/ENCFF442HXQ.bed.gz hg19 released mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, poor library complexity, insufficient read depth, severe bottlenecking ENCFF833FCO bed narrowPeak optimal idr thresholded peaks ENCSR000BLO ChIP-seq EFO:0002067 K562 cell line Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF001TDO, ENCFF276DPB, ENCFF442HXQ, ENCFF961HHN 265021 ENCODE Processing Pipeline c99ce128576687bc8a287943d3473029 https://www.encodeproject.org/files/ENCFF833FCO/@@download/ENCFF833FCO.bed.gz hg19 released mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, poor library complexity, insufficient read depth, severe bottlenecking ENCFF869WSZ bigWig fold change over control ENCSR000BLO ChIP-seq EFO:0002067 K562 cell line Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF175EOK, ENCFF538JCZ, ENCFF750MIM 213158831 ENCODE Processing Pipeline f8e0997277d19a4db34348e81dc1d40e https://www.encodeproject.org/files/ENCFF869WSZ/@@download/ENCFF869WSZ.bigWig hg19 released mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, poor library complexity, insufficient read depth, severe bottlenecking ENCFF976CCO bigBed narrowPeak optimal idr thresholded peaks ENCSR000BLO ChIP-seq EFO:0002067 K562 cell line Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF833FCO 530661 ENCODE Processing Pipeline 269cf32d95d5a3c1ca87bbdeb3cb0864 https://www.encodeproject.org/files/ENCFF976CCO/@@download/ENCFF976CCO.bigBed hg19 released mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, poor library complexity, insufficient read depth, severe bottlenecking ENCFF595LMV bigBed narrowPeak peaks ENCSR000BLO ChIP-seq EFO:0002067 K562 cell line Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF442HXQ 10198835 ENCODE Processing Pipeline 070e9017bb705794ae1246bf4b37e275 https://www.encodeproject.org/files/ENCFF595LMV/@@download/ENCFF595LMV.bigBed hg19 released mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, poor library complexity, insufficient read depth, severe bottlenecking ENCFF094HKE bigBed narrowPeak peaks ENCSR000BLO ChIP-seq EFO:0002067 K562 cell line Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 1 ENCFF276DPB 5150134 ENCODE Processing Pipeline b6e787c2ad2f5fb6b28afee461c6ccd1 https://www.encodeproject.org/files/ENCFF094HKE/@@download/ENCFF094HKE.bigBed hg19 released mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, poor library complexity, insufficient read depth, severe bottlenecking ENCFF797HCB bigBed narrowPeak peaks ENCSR000BLO ChIP-seq EFO:0002067 K562 cell line Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 2 ENCFF961HHN 7642028 ENCODE Processing Pipeline e026a381205d85853195991beef4c98a https://www.encodeproject.org/files/ENCFF797HCB/@@download/ENCFF797HCB.bigBed hg19 released mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, poor library complexity, insufficient read depth, severe bottlenecking ENCFF678KYI bed narrowPeak conservative idr thresholded peaks ENCSR000BLO ChIP-seq EFO:0002067 K562 cell line Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF001TDO, ENCFF276DPB, ENCFF442HXQ, ENCFF961HHN 195102 ENCODE Processing Pipeline 8806d20f5bf8c5c9c574005a38e55ece https://www.encodeproject.org/files/ENCFF678KYI/@@download/ENCFF678KYI.bed.gz hg19 released mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, poor library complexity, insufficient read depth, severe bottlenecking ENCFF276DPB bed narrowPeak peaks ENCSR000BLO ChIP-seq EFO:0002067 K562 cell line Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 1 ENCFF538JCZ, ENCFF750MIM 2554768 ENCODE Processing Pipeline 713c6ee524388deaf65c14f0ec838440 https://www.encodeproject.org/files/ENCFF276DPB/@@download/ENCFF276DPB.bed.gz hg19 released mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, poor library complexity, insufficient read depth, severe bottlenecking ENCFF961HHN bed narrowPeak peaks ENCSR000BLO ChIP-seq EFO:0002067 K562 cell line Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 2 ENCFF175EOK, ENCFF750MIM 3417919 ENCODE Processing Pipeline 572f7c3e214505beabcacec7b3f66c51 https://www.encodeproject.org/files/ENCFF961HHN/@@download/ENCFF961HHN.bed.gz hg19 released mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, poor library complexity, insufficient read depth, severe bottlenecking ENCFF035OWM bigBed narrowPeak conservative idr thresholded peaks ENCSR000BLO ChIP-seq EFO:0002067 K562 cell line Homo sapiens GABPA-human ENCAB000AGR DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF678KYI 428885 ENCODE Processing Pipeline c9786a18a8fe2217ce452a9e564f03b6 https://www.encodeproject.org/files/ENCFF035OWM/@@download/ENCFF035OWM.bigBed hg19 released mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth, poor library complexity, insufficient read depth, severe bottlenecking ENCFF000ZUV bigBed narrowPeak peaks ENCSR000DJW ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NR4A1-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE ENCFF001VRM 294278 Kevin White, UChicago 6b9ea80304dc0c2464842aabed45e32f https://www.encodeproject.org/files/ENCFF000ZUV/@@download/ENCFF000ZUV.bigBed hg19 archived missing genetic modification characterization, low read depth, low read length insufficient replicate concordance ENCFF000ZUW bigWig signal ENCSR000DJW ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NR4A1-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 292542056 Kevin White, UChicago 5382d810da2bb9da2659800c694297f8 https://www.encodeproject.org/files/ENCFF000ZUW/@@download/ENCFF000ZUW.bigWig hg19 archived missing genetic modification characterization, low read depth, low read length missing derived_from insufficient replicate concordance ENCFF000ZUX bam alignments ENCSR000DJW ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NR4A1-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 671994209 Kevin White, UChicago 770a028f9d4005de622063829caffda1 https://www.encodeproject.org/files/ENCFF000ZUX/@@download/ENCFF000ZUX.bam hg19 archived missing genetic modification characterization, low read depth, low read length missing derived_from insufficient replicate concordance ENCFF000ZUY bam alignments ENCSR000DJW ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NR4A1-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 716296990 Kevin White, UChicago d6593cdb6dbd763ee7386d174269312f https://www.encodeproject.org/files/ENCFF000ZUY/@@download/ENCFF000ZUY.bam hg19 archived missing genetic modification characterization, low read depth, low read length missing derived_from insufficient replicate concordance ENCFF000ZVE fastq reads ENCSR000DJW ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NR4A1-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 1 1 36 single-ended 848328492 Kevin White, UChicago 7d03fb3f855bb949563e61199a0ca587 https://www.encodeproject.org/files/ENCFF000ZVE/@@download/ENCFF000ZVE.fastq.gz Illumina Genome Analyzer II /files/ENCFF000ZVJ/ released missing genetic modification characterization, low read depth, low read length insufficient replicate concordance ENCFF000ZVF fastq reads ENCSR000DJW ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NR4A1-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 2 1 36 single-ended 845736353 Kevin White, UChicago 1fcb7812e8107875b334d23c6251cde2 https://www.encodeproject.org/files/ENCFF000ZVF/@@download/ENCFF000ZVF.fastq.gz Illumina Genome Analyzer II /files/ENCFF000ZXU/ released missing genetic modification characterization, low read depth, low read length insufficient replicate concordance ENCFF001VRM bed narrowPeak peaks ENCSR000DJW ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NR4A1-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 127185 Kevin White, UChicago 35973747f04c53456e53f30125e1ba96 https://www.encodeproject.org/files/ENCFF001VRM/@@download/ENCFF001VRM.bed.gz hg19 archived missing genetic modification characterization, low read depth, low read length missing derived_from insufficient replicate concordance ENCFF677UDF bam unfiltered alignments ENCSR000DJW ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NR4A1-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 1 36 ENCFF000ZVE, ENCFF643CGH 1036795439 ENCODE Processing Pipeline 22d6067cef6c384128b2d8a108752d6f https://www.encodeproject.org/files/ENCFF677UDF/@@download/ENCFF677UDF.bam GRCh38 released missing genetic modification characterization, low read depth, low read length insufficient replicate concordance ENCFF727AXF bam unfiltered alignments ENCSR000DJW ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NR4A1-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 2 36 ENCFF000ZVF, ENCFF643CGH 1056904874 ENCODE Processing Pipeline aea8c0448c96318eccdd2bbbe501de37 https://www.encodeproject.org/files/ENCFF727AXF/@@download/ENCFF727AXF.bam GRCh38 released missing genetic modification characterization, low read depth, low read length insufficient replicate concordance ENCFF586HBG bam unfiltered alignments ENCSR000DJW ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NR4A1-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 2 36 ENCFF000ZVF, ENCFF807MUK 1051945716 ENCODE Processing Pipeline 38f2ee18bfa57be2dde3bd73d0cad304 https://www.encodeproject.org/files/ENCFF586HBG/@@download/ENCFF586HBG.bam hg19 released missing genetic modification characterization, low read depth, low read length insufficient replicate concordance ENCFF245CVQ bam unfiltered alignments ENCSR000DJW ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NR4A1-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 1 36 ENCFF000ZVE, ENCFF807MUK 1029697487 ENCODE Processing Pipeline 3e09f92f2b5b65cefeae52b2c370514a https://www.encodeproject.org/files/ENCFF245CVQ/@@download/ENCFF245CVQ.bam hg19 released missing genetic modification characterization, low read depth, low read length insufficient replicate concordance ENCFF602UAC bam alignments ENCSR000DJW ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NR4A1-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 2 36 ENCFF000ZVF, ENCFF643CGH 752863847 ENCODE Processing Pipeline 7180fe9b40f918381adcd6c4357de77a https://www.encodeproject.org/files/ENCFF602UAC/@@download/ENCFF602UAC.bam GRCh38 released missing genetic modification characterization, low read depth, low read length insufficient replicate concordance ENCFF108WAD bam alignments ENCSR000DJW ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NR4A1-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 1 36 ENCFF000ZVE, ENCFF807MUK 703884003 ENCODE Processing Pipeline 6c6f5561892c9bd9b55f9df323e968ed https://www.encodeproject.org/files/ENCFF108WAD/@@download/ENCFF108WAD.bam hg19 released missing genetic modification characterization, low read depth, low read length insufficient replicate concordance ENCFF650RFL bam alignments ENCSR000DJW ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NR4A1-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 1 36 ENCFF000ZVE, ENCFF643CGH 703716633 ENCODE Processing Pipeline 37c8976e8feca2b946c2c8226a3a7b15 https://www.encodeproject.org/files/ENCFF650RFL/@@download/ENCFF650RFL.bam GRCh38 released missing genetic modification characterization, low read depth, low read length insufficient replicate concordance ENCFF387PPQ bam alignments ENCSR000DJW ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NR4A1-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 2 36 ENCFF000ZVF, ENCFF807MUK 753412701 ENCODE Processing Pipeline d114d38cbaeae73ecf7882ce06801d91 https://www.encodeproject.org/files/ENCFF387PPQ/@@download/ENCFF387PPQ.bam hg19 released missing genetic modification characterization, low read depth, low read length insufficient replicate concordance ENCFF734ZIE bigWig signal p-value ENCSR000DJW ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NR4A1-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 1 ENCFF108WAD, ENCFF647LGE, ENCFF713KWF 528977330 ENCODE Processing Pipeline 80adaf3da68fd3412d354428008d291a https://www.encodeproject.org/files/ENCFF734ZIE/@@download/ENCFF734ZIE.bigWig hg19 released missing genetic modification characterization, low read depth, low read length insufficient replicate concordance ENCFF164WSE bigWig signal p-value ENCSR000DJW ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NR4A1-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 2 ENCFF240RBJ, ENCFF244GCJ, ENCFF602UAC 584300996 ENCODE Processing Pipeline e411e0d563b9fe2d9bcbd33173b151b0 https://www.encodeproject.org/files/ENCFF164WSE/@@download/ENCFF164WSE.bigWig GRCh38 released missing genetic modification characterization, low read depth, low read length insufficient replicate concordance ENCFF903QGU bigWig signal p-value ENCSR000DJW ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NR4A1-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 2 ENCFF387PPQ, ENCFF647LGE, ENCFF713KWF 550488052 ENCODE Processing Pipeline 0f3ee001d05f7bc1e084f1fbeb6626be https://www.encodeproject.org/files/ENCFF903QGU/@@download/ENCFF903QGU.bigWig hg19 released missing genetic modification characterization, low read depth, low read length insufficient replicate concordance ENCFF411SXB bigWig signal p-value ENCSR000DJW ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NR4A1-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 1 ENCFF240RBJ, ENCFF244GCJ, ENCFF650RFL 542151244 ENCODE Processing Pipeline f05bfcaa14d6456c4dade7e13cd91e60 https://www.encodeproject.org/files/ENCFF411SXB/@@download/ENCFF411SXB.bigWig GRCh38 released missing genetic modification characterization, low read depth, low read length insufficient replicate concordance ENCFF191IYI bigWig signal p-value ENCSR000DJW ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NR4A1-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 1, 2 ENCFF240RBJ, ENCFF244GCJ, ENCFF602UAC, ENCFF650RFL 713729665 ENCODE Processing Pipeline 2421c15185681d10b4c6e6b3499ae4b6 https://www.encodeproject.org/files/ENCFF191IYI/@@download/ENCFF191IYI.bigWig GRCh38 released missing genetic modification characterization, low read depth, low read length insufficient replicate concordance ENCFF457LGG bigWig fold change over control ENCSR000DJW ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NR4A1-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 1 ENCFF108WAD, ENCFF647LGE, ENCFF713KWF 499942049 ENCODE Processing Pipeline e7092145c39ec09af730f1a2cdc9511c https://www.encodeproject.org/files/ENCFF457LGG/@@download/ENCFF457LGG.bigWig hg19 released missing genetic modification characterization, low read depth, low read length insufficient replicate concordance ENCFF713HHW bigWig fold change over control ENCSR000DJW ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NR4A1-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 2 ENCFF240RBJ, ENCFF244GCJ, ENCFF602UAC 488785862 ENCODE Processing Pipeline d6d9f403e910475de308c5a3e12ed250 https://www.encodeproject.org/files/ENCFF713HHW/@@download/ENCFF713HHW.bigWig GRCh38 released missing genetic modification characterization, low read depth, low read length insufficient replicate concordance ENCFF349DKD bigWig signal p-value ENCSR000DJW ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NR4A1-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 1, 2 ENCFF108WAD, ENCFF387PPQ, ENCFF647LGE, ENCFF713KWF 883095565 ENCODE Processing Pipeline 17baf604e4369de78dc294e3eed4d558 https://www.encodeproject.org/files/ENCFF349DKD/@@download/ENCFF349DKD.bigWig hg19 released missing genetic modification characterization, low read depth, low read length insufficient replicate concordance ENCFF216SSM bigWig fold change over control ENCSR000DJW ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NR4A1-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 1 ENCFF240RBJ, ENCFF244GCJ, ENCFF650RFL 497023103 ENCODE Processing Pipeline c13a5fc5bee6b7890230c5075d30a599 https://www.encodeproject.org/files/ENCFF216SSM/@@download/ENCFF216SSM.bigWig GRCh38 released missing genetic modification characterization, low read depth, low read length insufficient replicate concordance ENCFF033MEB bigWig fold change over control ENCSR000DJW ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NR4A1-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 2 ENCFF387PPQ, ENCFF647LGE, ENCFF713KWF 487527069 ENCODE Processing Pipeline 210304320b4bed2152347271c2592495 https://www.encodeproject.org/files/ENCFF033MEB/@@download/ENCFF033MEB.bigWig hg19 released missing genetic modification characterization, low read depth, low read length insufficient replicate concordance ENCFF710QSL bigWig fold change over control ENCSR000DJW ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NR4A1-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 1, 2 ENCFF108WAD, ENCFF387PPQ, ENCFF647LGE, ENCFF713KWF 759294431 ENCODE Processing Pipeline 3e165495d209077453b2c042698a8afd https://www.encodeproject.org/files/ENCFF710QSL/@@download/ENCFF710QSL.bigWig hg19 released missing genetic modification characterization, low read depth, low read length insufficient replicate concordance ENCFF085GMS bigWig fold change over control ENCSR000DJW ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NR4A1-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 1, 2 ENCFF240RBJ, ENCFF244GCJ, ENCFF602UAC, ENCFF650RFL 788186734 ENCODE Processing Pipeline fe4a5d83bb289b45cca0b95f664faf97 https://www.encodeproject.org/files/ENCFF085GMS/@@download/ENCFF085GMS.bigWig GRCh38 released missing genetic modification characterization, low read depth, low read length insufficient replicate concordance ENCFF585FBZ bed narrowPeak peaks ENCSR000DJW ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NR4A1-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 1, 2 ENCFF108WAD, ENCFF387PPQ, ENCFF647LGE, ENCFF713KWF 6584202 ENCODE Processing Pipeline cca6ada00315104c0fa60b7e9ffd437d https://www.encodeproject.org/files/ENCFF585FBZ/@@download/ENCFF585FBZ.bed.gz hg19 released missing genetic modification characterization, low read depth, low read length insufficient replicate concordance ENCFF559ETK bigBed narrowPeak peaks ENCSR000DJW ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NR4A1-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 2 ENCFF368NGK 13259447 ENCODE Processing Pipeline bbcb45d1790fec9e3141157f1f9bfd58 https://www.encodeproject.org/files/ENCFF559ETK/@@download/ENCFF559ETK.bigBed hg19 released missing genetic modification characterization, low read depth, low read length insufficient replicate concordance ENCFF771WFB bed narrowPeak peaks ENCSR000DJW ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NR4A1-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 1 ENCFF108WAD, ENCFF647LGE, ENCFF713KWF 5969136 ENCODE Processing Pipeline 15028b121038cbdc39e9bb1a764f4b87 https://www.encodeproject.org/files/ENCFF771WFB/@@download/ENCFF771WFB.bed.gz hg19 released missing genetic modification characterization, low read depth, low read length insufficient replicate concordance ENCFF229ZGH bed narrowPeak peaks ENCSR000DJW ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NR4A1-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 1 ENCFF240RBJ, ENCFF244GCJ, ENCFF650RFL 5921871 ENCODE Processing Pipeline eb25eadb6111f8dbd9c08c1512a86b1a https://www.encodeproject.org/files/ENCFF229ZGH/@@download/ENCFF229ZGH.bed.gz GRCh38 released missing genetic modification characterization, low read depth, low read length insufficient replicate concordance ENCFF117DTC bed narrowPeak peaks ENCSR000DJW ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NR4A1-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 1, 2 ENCFF240RBJ, ENCFF244GCJ, ENCFF602UAC, ENCFF650RFL 6584397 ENCODE Processing Pipeline 6fd2907c80ee14ec583c6b844473f4fc https://www.encodeproject.org/files/ENCFF117DTC/@@download/ENCFF117DTC.bed.gz GRCh38 released missing genetic modification characterization, low read depth, low read length insufficient replicate concordance ENCFF368NGK bed narrowPeak peaks ENCSR000DJW ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NR4A1-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 2 ENCFF387PPQ, ENCFF647LGE, ENCFF713KWF 5646841 ENCODE Processing Pipeline b58f5e76478991950ef4d8e8b5f0d8fd https://www.encodeproject.org/files/ENCFF368NGK/@@download/ENCFF368NGK.bed.gz hg19 released missing genetic modification characterization, low read depth, low read length insufficient replicate concordance ENCFF858ZAR bed narrowPeak peaks ENCSR000DJW ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NR4A1-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 2 ENCFF240RBJ, ENCFF244GCJ, ENCFF602UAC 5641637 ENCODE Processing Pipeline 15479ac58223db1458f5f3445066f9b8 https://www.encodeproject.org/files/ENCFF858ZAR/@@download/ENCFF858ZAR.bed.gz GRCh38 released missing genetic modification characterization, low read depth, low read length insufficient replicate concordance ENCFF943JBU bigBed narrowPeak peaks ENCSR000DJW ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NR4A1-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 1 ENCFF229ZGH 13156035 ENCODE Processing Pipeline c80755b0be4c4d4f6c792e514105bb37 https://www.encodeproject.org/files/ENCFF943JBU/@@download/ENCFF943JBU.bigBed GRCh38 released missing genetic modification characterization, low read depth, low read length insufficient replicate concordance ENCFF357OZC bigBed narrowPeak peaks ENCSR000DJW ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NR4A1-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 1 ENCFF771WFB 13134029 ENCODE Processing Pipeline 7e4750d178a192ff55f22099e71f0e6e https://www.encodeproject.org/files/ENCFF357OZC/@@download/ENCFF357OZC.bigBed hg19 released missing genetic modification characterization, low read depth, low read length insufficient replicate concordance ENCFF983BUB bigBed narrowPeak peaks ENCSR000DJW ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NR4A1-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 2 ENCFF858ZAR 13269628 ENCODE Processing Pipeline ccadb0acfc0caf64c0a815621e05717c https://www.encodeproject.org/files/ENCFF983BUB/@@download/ENCFF983BUB.bigBed GRCh38 released missing genetic modification characterization, low read depth, low read length insufficient replicate concordance ENCFF223YTT bed narrowPeak conservative idr thresholded peaks ENCSR000DJW ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NR4A1-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 1, 2 ENCFF001TDO, ENCFF368NGK, ENCFF585FBZ, ENCFF771WFB 1858 ENCODE Processing Pipeline 303b088828f1ffb96de7c7d845adcdc6 https://www.encodeproject.org/files/ENCFF223YTT/@@download/ENCFF223YTT.bed.gz hg19 released missing genetic modification characterization, low read depth, low read length insufficient replicate concordance ENCFF868ABD bigBed narrowPeak peaks ENCSR000DJW ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NR4A1-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 1, 2 ENCFF117DTC 13144210 ENCODE Processing Pipeline 864194b74445026ff4e31a34fcd62b0b https://www.encodeproject.org/files/ENCFF868ABD/@@download/ENCFF868ABD.bigBed GRCh38 released missing genetic modification characterization, low read depth, low read length insufficient replicate concordance ENCFF030QEM bed narrowPeak optimal idr thresholded peaks ENCSR000DJW ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NR4A1-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 1, 2 ENCFF001TDO, ENCFF368NGK, ENCFF585FBZ, ENCFF771WFB 18193 ENCODE Processing Pipeline 14a3d6885148fb51f43bf238a190ef3c https://www.encodeproject.org/files/ENCFF030QEM/@@download/ENCFF030QEM.bed.gz hg19 released missing genetic modification characterization, low read depth, low read length insufficient replicate concordance ENCFF002VSM bed narrowPeak conservative idr thresholded peaks ENCSR000DJW ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NR4A1-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 1, 2 ENCFF117DTC, ENCFF229ZGH, ENCFF419RSJ, ENCFF858ZAR 1091 ENCODE Processing Pipeline c6f18f3c7c85f19680cb89d4e58c2b17 https://www.encodeproject.org/files/ENCFF002VSM/@@download/ENCFF002VSM.bed.gz GRCh38 released missing genetic modification characterization, low read depth, low read length insufficient replicate concordance ENCFF468APC bigBed narrowPeak optimal idr thresholded peaks ENCSR000DJW ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NR4A1-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 1, 2 ENCFF868BIT 108505 ENCODE Processing Pipeline 077db3336ca5d2e78663571145a00f1b https://www.encodeproject.org/files/ENCFF468APC/@@download/ENCFF468APC.bigBed GRCh38 released missing genetic modification characterization, low read depth, low read length insufficient replicate concordance ENCFF734YFO bigBed narrowPeak peaks ENCSR000DJW ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NR4A1-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 1, 2 ENCFF585FBZ 13134565 ENCODE Processing Pipeline 062ae409d6c6212650a42cb30907169b https://www.encodeproject.org/files/ENCFF734YFO/@@download/ENCFF734YFO.bigBed hg19 released missing genetic modification characterization, low read depth, low read length insufficient replicate concordance ENCFF171BKD bigBed narrowPeak conservative idr thresholded peaks ENCSR000DJW ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NR4A1-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 1, 2 ENCFF002VSM 60658 ENCODE Processing Pipeline b6af98891b18a1bd0b17ab048609cf42 https://www.encodeproject.org/files/ENCFF171BKD/@@download/ENCFF171BKD.bigBed GRCh38 released missing genetic modification characterization, low read depth, low read length insufficient replicate concordance ENCFF997WGU bigBed narrowPeak conservative idr thresholded peaks ENCSR000DJW ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NR4A1-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 1, 2 ENCFF223YTT 55625 ENCODE Processing Pipeline 82510e99eeaf9a19feadf8dd525e3be8 https://www.encodeproject.org/files/ENCFF997WGU/@@download/ENCFF997WGU.bigBed hg19 released missing genetic modification characterization, low read depth, low read length insufficient replicate concordance ENCFF868BIT bed narrowPeak optimal idr thresholded peaks ENCSR000DJW ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NR4A1-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 1, 2 ENCFF117DTC, ENCFF229ZGH, ENCFF419RSJ, ENCFF858ZAR 15594 ENCODE Processing Pipeline 51debf39c5cf7bebc1d7e177410af26e https://www.encodeproject.org/files/ENCFF868BIT/@@download/ENCFF868BIT.bed.gz GRCh38 released missing genetic modification characterization, low read depth, low read length insufficient replicate concordance ENCFF455YGN bigBed narrowPeak optimal idr thresholded peaks ENCSR000DJW ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NR4A1-human ENCAB000ASW DNA see document see document False 2011-06-03 ENCODE 1, 2 ENCFF030QEM 111791 ENCODE Processing Pipeline 1865413e1a207e8f96f507f18d453934 https://www.encodeproject.org/files/ENCFF455YGN/@@download/ENCFF455YGN.bigBed hg19 released missing genetic modification characterization, low read depth, low read length insufficient replicate concordance ENCFF345UYZ bam unfiltered alignments ENCSR818DQV ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-MAFG-human ENCAB728YTO DNA False 2016-01-14 ENCODE 2 100 ENCFF131JSB, ENCFF711WIA, ENCFF807MUK 4837904263 ENCODE Processing Pipeline c9b96112f3c9bb771c1d95d6a4d47b2a https://www.encodeproject.org/files/ENCFF345UYZ/@@download/ENCFF345UYZ.bam hg19 released missing genetic modification characterization missing control alignments ENCFF523FHI bam unfiltered alignments ENCSR818DQV ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-MAFG-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1 100 ENCFF307CQO, ENCFF683PDC, ENCFF807MUK 5610276581 ENCODE Processing Pipeline b404fd0cd768e5a4656b65f9c401f5a0 https://www.encodeproject.org/files/ENCFF523FHI/@@download/ENCFF523FHI.bam hg19 released missing genetic modification characterization missing control alignments ENCFF131JSB fastq reads ENCSR818DQV ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-MAFG-human ENCAB728YTO DNA False 2016-01-14 ENCODE 2 1 100 paired-ended 2 ENCFF711WIA 2283754976 Michael Snyder, Stanford 81ecbc383c28d7ed2c21884908aac1e1 SRA:SRR5112119 https://www.encodeproject.org/files/ENCFF131JSB/@@download/ENCFF131JSB.fastq.gz Illumina HiSeq 2000 /files/ENCFF211RBV/ released missing genetic modification characterization missing control alignments ENCFF683PDC fastq reads ENCSR818DQV ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-MAFG-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1 1 100 paired-ended 1 ENCFF307CQO 2590415997 Michael Snyder, Stanford 1334d97655765b9eac29376fc49d6d55 SRA:SRR5112120 https://www.encodeproject.org/files/ENCFF683PDC/@@download/ENCFF683PDC.fastq.gz Illumina HiSeq 2000 /files/ENCFF345KIN/ released missing genetic modification characterization missing control alignments ENCFF307CQO fastq reads ENCSR818DQV ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-MAFG-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1 1 100 paired-ended 2 ENCFF683PDC 2681286491 Michael Snyder, Stanford bcc0616b5b85cf69fb3b4099523f5289 SRA:SRR5112120 https://www.encodeproject.org/files/ENCFF307CQO/@@download/ENCFF307CQO.fastq.gz Illumina HiSeq 2000 /files/ENCFF211RBV/ released missing genetic modification characterization missing control alignments ENCFF711WIA fastq reads ENCSR818DQV ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-MAFG-human ENCAB728YTO DNA False 2016-01-14 ENCODE 2 1 100 paired-ended 1 ENCFF131JSB 2239877231 Michael Snyder, Stanford 8c4b2247a44324e872588efe00182b33 SRA:SRR5112119 https://www.encodeproject.org/files/ENCFF711WIA/@@download/ENCFF711WIA.fastq.gz Illumina HiSeq 2000 /files/ENCFF345KIN/ released missing genetic modification characterization missing control alignments ENCFF308BKD bam alignments ENCSR818DQV ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-MAFG-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1 100 ENCFF307CQO, ENCFF683PDC, ENCFF807MUK 4492676344 ENCODE Processing Pipeline 0c3920735cb5ee18984de6cad25d2df0 https://www.encodeproject.org/files/ENCFF308BKD/@@download/ENCFF308BKD.bam hg19 released missing genetic modification characterization missing control alignments ENCFF743FRI bam alignments ENCSR818DQV ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-MAFG-human ENCAB728YTO DNA False 2016-01-14 ENCODE 2 100 ENCFF131JSB, ENCFF711WIA, ENCFF807MUK 3996168283 ENCODE Processing Pipeline a8f4427760911fb614748587c0bb0933 https://www.encodeproject.org/files/ENCFF743FRI/@@download/ENCFF743FRI.bam hg19 released missing genetic modification characterization missing control alignments ENCFF526POD bigWig signal p-value ENCSR818DQV ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-MAFG-human ENCAB728YTO DNA False 2016-01-14 ENCODE 2 ENCFF500EQZ, ENCFF743FRI 1058183629 ENCODE Processing Pipeline 9079062d2f28e7a3db5a5781403d3a6d https://www.encodeproject.org/files/ENCFF526POD/@@download/ENCFF526POD.bigWig hg19 released missing genetic modification characterization missing control alignments ENCFF667DAO bigWig signal p-value ENCSR818DQV ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-MAFG-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1 ENCFF308BKD, ENCFF500EQZ 1101347497 ENCODE Processing Pipeline 56d73276cf6b70e31e87536a67e46bbd https://www.encodeproject.org/files/ENCFF667DAO/@@download/ENCFF667DAO.bigWig hg19 released missing genetic modification characterization missing control alignments ENCFF107IDU bigWig fold change over control ENCSR818DQV ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-MAFG-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1 ENCFF308BKD, ENCFF500EQZ 1081579905 ENCODE Processing Pipeline a1cb434a0a98804cd849137d012f0d51 https://www.encodeproject.org/files/ENCFF107IDU/@@download/ENCFF107IDU.bigWig hg19 released missing genetic modification characterization missing control alignments ENCFF222GKQ bigWig fold change over control ENCSR818DQV ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-MAFG-human ENCAB728YTO DNA False 2016-01-14 ENCODE 2 ENCFF500EQZ, ENCFF743FRI 1083817698 ENCODE Processing Pipeline b3ab9dc46cd180b1d92f1ec71f2dfc93 https://www.encodeproject.org/files/ENCFF222GKQ/@@download/ENCFF222GKQ.bigWig hg19 released missing genetic modification characterization missing control alignments ENCFF181XDA bam unfiltered alignments ENCSR818DQV ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-MAFG-human ENCAB728YTO DNA False 2016-01-14 ENCODE 2 100 ENCFF131JSB, ENCFF643CGH, ENCFF711WIA 4842813653 ENCODE Processing Pipeline adcc1510a2574c9efe7be77a95063a73 https://www.encodeproject.org/files/ENCFF181XDA/@@download/ENCFF181XDA.bam GRCh38 released missing genetic modification characterization missing control alignments ENCFF804RFI bam unfiltered alignments ENCSR818DQV ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-MAFG-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1 100 ENCFF307CQO, ENCFF643CGH, ENCFF683PDC 5616272440 ENCODE Processing Pipeline 5130d55bb784f54974912201ee3f1311 https://www.encodeproject.org/files/ENCFF804RFI/@@download/ENCFF804RFI.bam GRCh38 released missing genetic modification characterization missing control alignments ENCFF253HOC bam alignments ENCSR818DQV ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-MAFG-human ENCAB728YTO DNA False 2016-01-14 ENCODE 2 100 ENCFF131JSB, ENCFF643CGH, ENCFF711WIA 3999119712 ENCODE Processing Pipeline 6dbf2c03d57b5bed5acbc5fa771565b5 https://www.encodeproject.org/files/ENCFF253HOC/@@download/ENCFF253HOC.bam GRCh38 released missing genetic modification characterization missing control alignments ENCFF773DBT bam alignments ENCSR818DQV ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-MAFG-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1 100 ENCFF307CQO, ENCFF643CGH, ENCFF683PDC 4495155363 ENCODE Processing Pipeline 0a2eac8cf5eea65727dac6c5682efdf9 https://www.encodeproject.org/files/ENCFF773DBT/@@download/ENCFF773DBT.bam GRCh38 released missing genetic modification characterization missing control alignments ENCFF359RYZ bigWig signal p-value ENCSR818DQV ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-MAFG-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1 ENCFF773DBT 1103089863 ENCODE Processing Pipeline bb29730a9393f12c8eed3a9219be0de6 https://www.encodeproject.org/files/ENCFF359RYZ/@@download/ENCFF359RYZ.bigWig GRCh38 released missing genetic modification characterization missing control alignments ENCFF469ZJN bigWig signal p-value ENCSR818DQV ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-MAFG-human ENCAB728YTO DNA False 2016-01-14 ENCODE 2 ENCFF253HOC 917807271 ENCODE Processing Pipeline 554f26946a58d4e598407600d9fac07f https://www.encodeproject.org/files/ENCFF469ZJN/@@download/ENCFF469ZJN.bigWig GRCh38 released missing genetic modification characterization missing control alignments ENCFF294GWN bigWig signal p-value ENCSR818DQV ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-MAFG-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF253HOC, ENCFF773DBT 1277579804 ENCODE Processing Pipeline 306b300dd306f8c216e679305f3c3772 https://www.encodeproject.org/files/ENCFF294GWN/@@download/ENCFF294GWN.bigWig GRCh38 released missing genetic modification characterization missing control alignments ENCFF030QUO bigWig fold change over control ENCSR818DQV ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-MAFG-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1 ENCFF773DBT 1083480960 ENCODE Processing Pipeline 0f422cabf1679c29b4ed58596e356515 https://www.encodeproject.org/files/ENCFF030QUO/@@download/ENCFF030QUO.bigWig GRCh38 released missing genetic modification characterization missing control alignments ENCFF815ZUP bigWig fold change over control ENCSR818DQV ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-MAFG-human ENCAB728YTO DNA False 2016-01-14 ENCODE 2 ENCFF253HOC 1084619456 ENCODE Processing Pipeline 2b5c451a6ca874e3759c33cffb10b420 https://www.encodeproject.org/files/ENCFF815ZUP/@@download/ENCFF815ZUP.bigWig GRCh38 released missing genetic modification characterization missing control alignments ENCFF042GTZ bigWig fold change over control ENCSR818DQV ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-MAFG-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF253HOC, ENCFF773DBT 1596162316 ENCODE Processing Pipeline 679ebeebf15eebee8718c4f796a38771 https://www.encodeproject.org/files/ENCFF042GTZ/@@download/ENCFF042GTZ.bigWig GRCh38 released missing genetic modification characterization missing control alignments ENCFF166ADO bed narrowPeak peaks ENCSR818DQV ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-MAFG-human ENCAB728YTO DNA False 2016-01-14 ENCODE 2 ENCFF253HOC 6744640 ENCODE Processing Pipeline 2dbf10c36f3953e0b10d7c52be02cce3 https://www.encodeproject.org/files/ENCFF166ADO/@@download/ENCFF166ADO.bed.gz GRCh38 released missing genetic modification characterization missing control alignments ENCFF748CBU bed narrowPeak peaks ENCSR818DQV ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-MAFG-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1 ENCFF773DBT 6770747 ENCODE Processing Pipeline 9653024a160550a16d25d441f7574d22 https://www.encodeproject.org/files/ENCFF748CBU/@@download/ENCFF748CBU.bed.gz GRCh38 released missing genetic modification characterization missing control alignments ENCFF531MOW bigBed narrowPeak peaks ENCSR818DQV ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-MAFG-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1 ENCFF748CBU 13614706 ENCODE Processing Pipeline b68fefffd9a4b9e51491d493a75cc48b https://www.encodeproject.org/files/ENCFF531MOW/@@download/ENCFF531MOW.bigBed GRCh38 released missing genetic modification characterization missing control alignments ENCFF271XRG bed narrowPeak peaks ENCSR818DQV ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-MAFG-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF253HOC, ENCFF773DBT 7216327 ENCODE Processing Pipeline 707c41f984e9e37d528b919a85415b83 https://www.encodeproject.org/files/ENCFF271XRG/@@download/ENCFF271XRG.bed.gz GRCh38 released missing genetic modification characterization missing control alignments ENCFF315YPV bigBed narrowPeak peaks ENCSR818DQV ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-MAFG-human ENCAB728YTO DNA False 2016-01-14 ENCODE 2 ENCFF166ADO 13714961 ENCODE Processing Pipeline 21e3c3329838023ff44856d374ff2d5e https://www.encodeproject.org/files/ENCFF315YPV/@@download/ENCFF315YPV.bigBed GRCh38 released missing genetic modification characterization missing control alignments ENCFF984LWO bed narrowPeak conservative idr thresholded peaks ENCSR818DQV ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-MAFG-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF166ADO, ENCFF271XRG, ENCFF419RSJ, ENCFF748CBU 754454 ENCODE Processing Pipeline 8f50cf77f97709ed1c5ecd57a93c49c2 https://www.encodeproject.org/files/ENCFF984LWO/@@download/ENCFF984LWO.bed.gz GRCh38 released missing genetic modification characterization missing control alignments ENCFF467IGT bigBed narrowPeak peaks ENCSR818DQV ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-MAFG-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF271XRG 13731841 ENCODE Processing Pipeline 6dd435337de6d8684bc307b381f7cd5c https://www.encodeproject.org/files/ENCFF467IGT/@@download/ENCFF467IGT.bigBed GRCh38 released missing genetic modification characterization missing control alignments ENCFF544XCR bigBed narrowPeak conservative idr thresholded peaks ENCSR818DQV ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-MAFG-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF984LWO 1567383 ENCODE Processing Pipeline 041604a7fe40bbb4aa7059d714e53f1a https://www.encodeproject.org/files/ENCFF544XCR/@@download/ENCFF544XCR.bigBed GRCh38 released missing genetic modification characterization missing control alignments ENCFF213YRQ bigBed narrowPeak optimal idr thresholded peaks ENCSR818DQV ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-MAFG-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF393CCU 1663248 ENCODE Processing Pipeline c0e64cc52965b727aec172c968c37d76 https://www.encodeproject.org/files/ENCFF213YRQ/@@download/ENCFF213YRQ.bigBed GRCh38 released missing genetic modification characterization missing control alignments ENCFF393CCU bed narrowPeak optimal idr thresholded peaks ENCSR818DQV ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-MAFG-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF166ADO, ENCFF271XRG, ENCFF419RSJ, ENCFF748CBU 816340 ENCODE Processing Pipeline 0f9a01aecf249adadda32dae613ae85e https://www.encodeproject.org/files/ENCFF393CCU/@@download/ENCFF393CCU.bed.gz GRCh38 released missing genetic modification characterization missing control alignments ENCFF152GXE bigWig fold change over control ENCSR818DQV ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-MAFG-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF308BKD, ENCFF500EQZ, ENCFF743FRI 1581712211 ENCODE Processing Pipeline d9605ab0fada41b89d9d0b592fb83c2d https://www.encodeproject.org/files/ENCFF152GXE/@@download/ENCFF152GXE.bigWig hg19 released missing genetic modification characterization missing control alignments ENCFF361OOM bigBed narrowPeak peaks ENCSR818DQV ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-MAFG-human ENCAB728YTO DNA False 2016-01-14 ENCODE 2 ENCFF703AYW 13712805 ENCODE Processing Pipeline 9bac9e12841661b6a9c604a7b1f8b785 https://www.encodeproject.org/files/ENCFF361OOM/@@download/ENCFF361OOM.bigBed hg19 released missing genetic modification characterization missing control alignments ENCFF638THQ bed narrowPeak peaks ENCSR818DQV ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-MAFG-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1 ENCFF308BKD, ENCFF500EQZ 6831070 ENCODE Processing Pipeline f0b5bdd047d8393493505853dc72eedc https://www.encodeproject.org/files/ENCFF638THQ/@@download/ENCFF638THQ.bed.gz hg19 released missing genetic modification characterization missing control alignments ENCFF703AYW bed narrowPeak peaks ENCSR818DQV ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-MAFG-human ENCAB728YTO DNA False 2016-01-14 ENCODE 2 ENCFF500EQZ, ENCFF743FRI 6754100 ENCODE Processing Pipeline d8dd05a8c34d3e187849ab51b732871e https://www.encodeproject.org/files/ENCFF703AYW/@@download/ENCFF703AYW.bed.gz hg19 released missing genetic modification characterization missing control alignments ENCFF927JBT bed narrowPeak optimal idr thresholded peaks ENCSR818DQV ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-MAFG-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF001TDO, ENCFF421KPL, ENCFF638THQ, ENCFF703AYW 830198 ENCODE Processing Pipeline 3767fbcb94979dba34dfa376996af7a6 https://www.encodeproject.org/files/ENCFF927JBT/@@download/ENCFF927JBT.bed.gz hg19 released missing genetic modification characterization missing control alignments ENCFF921SVE bed narrowPeak conservative idr thresholded peaks ENCSR818DQV ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-MAFG-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF001TDO, ENCFF421KPL, ENCFF638THQ, ENCFF703AYW 761326 ENCODE Processing Pipeline 7ce7acc1806b1034a155c489cdb64ab3 https://www.encodeproject.org/files/ENCFF921SVE/@@download/ENCFF921SVE.bed.gz hg19 released missing genetic modification characterization missing control alignments ENCFF077OWF bigWig signal p-value ENCSR818DQV ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-MAFG-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF308BKD, ENCFF500EQZ, ENCFF743FRI 1265070615 ENCODE Processing Pipeline a53c08f98fd7afa1b0aa6f4dc4bc9ab4 https://www.encodeproject.org/files/ENCFF077OWF/@@download/ENCFF077OWF.bigWig hg19 released missing genetic modification characterization missing control alignments ENCFF668ZJU bigBed narrowPeak peaks ENCSR818DQV ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-MAFG-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF421KPL 13750051 ENCODE Processing Pipeline ce14bab7365ef75155dee01d9f1edd9b https://www.encodeproject.org/files/ENCFF668ZJU/@@download/ENCFF668ZJU.bigBed hg19 released missing genetic modification characterization missing control alignments ENCFF303MOG bigBed narrowPeak optimal idr thresholded peaks ENCSR818DQV ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-MAFG-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF927JBT 1678997 ENCODE Processing Pipeline f7e3427088ddb36423267979bde1a37e https://www.encodeproject.org/files/ENCFF303MOG/@@download/ENCFF303MOG.bigBed hg19 released missing genetic modification characterization missing control alignments ENCFF421KPL bed narrowPeak peaks ENCSR818DQV ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-MAFG-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF308BKD, ENCFF500EQZ, ENCFF743FRI 7241734 ENCODE Processing Pipeline 58b8adab70591db2724873566c7f03ac https://www.encodeproject.org/files/ENCFF421KPL/@@download/ENCFF421KPL.bed.gz hg19 released missing genetic modification characterization missing control alignments ENCFF881CUS bigBed narrowPeak peaks ENCSR818DQV ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-MAFG-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1 ENCFF638THQ 13666100 ENCODE Processing Pipeline 767332a5877cf03411a34d8dc83bf7e5 https://www.encodeproject.org/files/ENCFF881CUS/@@download/ENCFF881CUS.bigBed hg19 released missing genetic modification characterization missing control alignments ENCFF619UGC bigBed narrowPeak conservative idr thresholded peaks ENCSR818DQV ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-MAFG-human ENCAB728YTO DNA False 2016-01-14 ENCODE 1, 2 ENCFF921SVE 1571480 ENCODE Processing Pipeline dbf8aa82daea3a24bec4c5aca6969ebd https://www.encodeproject.org/files/ENCFF619UGC/@@download/ENCFF619UGC.bigBed hg19 released missing genetic modification characterization missing control alignments ENCFF911JOD bam unfiltered alignments ENCSR920BLG ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIN3A-human ENCAB000AKR DNA False 2016-03-02 ENCODE 1 36 ENCFF002EWE, ENCFF807MUK 1215849621 ENCODE Processing Pipeline 28f087ca3842f4eda598ed52dc70546d https://www.encodeproject.org/files/ENCFF911JOD/@@download/ENCFF911JOD.bam hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF076YJG bam unfiltered alignments ENCSR920BLG ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIN3A-human ENCAB000AKR DNA False 2016-03-02 ENCODE 2 36 ENCFF002EWJ, ENCFF807MUK 966453564 ENCODE Processing Pipeline 61a6caf17b7b63a6b4debfd1e27ea035 https://www.encodeproject.org/files/ENCFF076YJG/@@download/ENCFF076YJG.bam hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF002EWE fastq reads ENCSR920BLG ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIN3A-human ENCAB000AKR DNA False 2016-03-02 ENCODE 1 1 36 single-ended 998341190 Michael Snyder, Stanford 1f02522858603fc674ede6f5acb5468d SRA:SRR5112281 https://www.encodeproject.org/files/ENCFF002EWE/@@download/ENCFF002EWE.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF002ECW/ released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF002EWJ fastq reads ENCSR920BLG ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIN3A-human ENCAB000AKR DNA False 2016-03-02 ENCODE 2 1 36 single-ended 863870734 Michael Snyder, Stanford 941dfe8274b071910504a166b9cfa976 SRA:SRR5112282 https://www.encodeproject.org/files/ENCFF002EWJ/@@download/ENCFF002EWJ.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF002ECS/ released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF579IUE bam alignments ENCSR920BLG ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIN3A-human ENCAB000AKR DNA False 2016-03-02 ENCODE 2 36 ENCFF002EWJ, ENCFF807MUK 435387015 ENCODE Processing Pipeline a43e608109766041372e4eb2b4135475 https://www.encodeproject.org/files/ENCFF579IUE/@@download/ENCFF579IUE.bam hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF729BKM bam alignments ENCSR920BLG ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIN3A-human ENCAB000AKR DNA False 2016-03-02 ENCODE 1 36 ENCFF002EWE, ENCFF807MUK 837177050 ENCODE Processing Pipeline af7fbe940e1e536e17c75e495d48e9a0 https://www.encodeproject.org/files/ENCFF729BKM/@@download/ENCFF729BKM.bam hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF718AFD bed narrowPeak peaks ENCSR920BLG ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIN3A-human ENCAB000AKR DNA False 2016-03-02 ENCODE 2 ENCFF579IUE, ENCFF879OQC 5040348 ENCODE Processing Pipeline 0ce9c9477d4487d493a5e07f3bc934fb https://www.encodeproject.org/files/ENCFF718AFD/@@download/ENCFF718AFD.bed.gz hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF699SNH bigWig fold change over control ENCSR920BLG ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIN3A-human ENCAB000AKR DNA False 2016-03-02 ENCODE 1 ENCFF335IPE, ENCFF729BKM 434903980 ENCODE Processing Pipeline 3b875737eab8852fff7cc3df95348267 https://www.encodeproject.org/files/ENCFF699SNH/@@download/ENCFF699SNH.bigWig hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF765BTX bigBed narrowPeak peaks ENCSR920BLG ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIN3A-human ENCAB000AKR DNA False 2016-03-02 ENCODE 2 ENCFF718AFD 10915628 ENCODE Processing Pipeline cdfb9ba2c2c1a83874245f8f254f37a4 https://www.encodeproject.org/files/ENCFF765BTX/@@download/ENCFF765BTX.bigBed hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF092XMT bigWig signal p-value ENCSR920BLG ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIN3A-human ENCAB000AKR DNA False 2016-03-02 ENCODE 1 ENCFF335IPE, ENCFF729BKM 459420195 ENCODE Processing Pipeline 6c578183ad5fa6a1f0cd0844a27032e0 https://www.encodeproject.org/files/ENCFF092XMT/@@download/ENCFF092XMT.bigWig hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF481KNS bigWig signal p-value ENCSR920BLG ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIN3A-human ENCAB000AKR DNA False 2016-03-02 ENCODE 2 ENCFF579IUE, ENCFF879OQC 418426754 ENCODE Processing Pipeline 204b305fac1ca0dad6c9f9a4a0af20b8 https://www.encodeproject.org/files/ENCFF481KNS/@@download/ENCFF481KNS.bigWig hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF791GAM bed narrowPeak peaks ENCSR920BLG ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIN3A-human ENCAB000AKR DNA False 2016-03-02 ENCODE 1 ENCFF335IPE, ENCFF729BKM 5988481 ENCODE Processing Pipeline 99ecd27acaeac0e97bc7a7718227b136 https://www.encodeproject.org/files/ENCFF791GAM/@@download/ENCFF791GAM.bed.gz hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF877VHC bed narrowPeak peaks ENCSR920BLG ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIN3A-human ENCAB000AKR DNA False 2016-03-02 ENCODE 1, 2 ENCFF335IPE, ENCFF579IUE, ENCFF729BKM, ENCFF879OQC 6859409 ENCODE Processing Pipeline d8dbb7005f5ec54696e86d6fe01e27c4 https://www.encodeproject.org/files/ENCFF877VHC/@@download/ENCFF877VHC.bed.gz hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF669LRL bigWig signal p-value ENCSR920BLG ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIN3A-human ENCAB000AKR DNA False 2016-03-02 ENCODE 1, 2 ENCFF335IPE, ENCFF579IUE, ENCFF729BKM, ENCFF879OQC 817415323 ENCODE Processing Pipeline 9affa393f49f976f2b6d335a90272946 https://www.encodeproject.org/files/ENCFF669LRL/@@download/ENCFF669LRL.bigWig hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF588KVD bigWig fold change over control ENCSR920BLG ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIN3A-human ENCAB000AKR DNA False 2016-03-02 ENCODE 2 ENCFF579IUE, ENCFF879OQC 263326629 ENCODE Processing Pipeline 418ebfea0ac1b685876b683bccc4900e https://www.encodeproject.org/files/ENCFF588KVD/@@download/ENCFF588KVD.bigWig hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF783JQV bigWig fold change over control ENCSR920BLG ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIN3A-human ENCAB000AKR DNA False 2016-03-02 ENCODE 1, 2 ENCFF335IPE, ENCFF579IUE, ENCFF729BKM, ENCFF879OQC 798957571 ENCODE Processing Pipeline f921e302d5ea3685ada110e92037ce4b https://www.encodeproject.org/files/ENCFF783JQV/@@download/ENCFF783JQV.bigWig hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF665MON bigBed narrowPeak peaks ENCSR920BLG ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIN3A-human ENCAB000AKR DNA False 2016-03-02 ENCODE 1 ENCFF791GAM 13078855 ENCODE Processing Pipeline 6aa3a22122d9e37ea4f7700d66a3454d https://www.encodeproject.org/files/ENCFF665MON/@@download/ENCFF665MON.bigBed hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF745QPA bigBed narrowPeak peaks ENCSR920BLG ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIN3A-human ENCAB000AKR DNA False 2016-03-02 ENCODE 1, 2 ENCFF877VHC 13108367 ENCODE Processing Pipeline b8006e5ea5f8f85328e910fbb3624004 https://www.encodeproject.org/files/ENCFF745QPA/@@download/ENCFF745QPA.bigBed hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF706HJC bam unfiltered alignments ENCSR920BLG ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIN3A-human ENCAB000AKR DNA False 2016-03-02 ENCODE 1 36 ENCFF002EWE, ENCFF643CGH 1222851194 ENCODE Processing Pipeline 993ac10050c29a68af41cdc158d08ab9 https://www.encodeproject.org/files/ENCFF706HJC/@@download/ENCFF706HJC.bam GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF900RPG bam unfiltered alignments ENCSR920BLG ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIN3A-human ENCAB000AKR DNA False 2016-03-02 ENCODE 2 36 ENCFF002EWJ, ENCFF643CGH 971288421 ENCODE Processing Pipeline 792f48792294d28e7e3bee43d39ae510 https://www.encodeproject.org/files/ENCFF900RPG/@@download/ENCFF900RPG.bam GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF385PRZ bam alignments ENCSR920BLG ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIN3A-human ENCAB000AKR DNA False 2016-03-02 ENCODE 2 36 ENCFF002EWJ, ENCFF643CGH 435059065 ENCODE Processing Pipeline a0a393f6fe1563780404b9617bf64346 https://www.encodeproject.org/files/ENCFF385PRZ/@@download/ENCFF385PRZ.bam GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF315DZX bam alignments ENCSR920BLG ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIN3A-human ENCAB000AKR DNA False 2016-03-02 ENCODE 1 36 ENCFF002EWE, ENCFF643CGH 836591325 ENCODE Processing Pipeline 7453b198663bf10a85512ffc3a8e5e22 https://www.encodeproject.org/files/ENCFF315DZX/@@download/ENCFF315DZX.bam GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF385GEE bigWig signal p-value ENCSR920BLG ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIN3A-human ENCAB000AKR DNA False 2016-03-02 ENCODE 1 ENCFF156FED, ENCFF315DZX 504465328 ENCODE Processing Pipeline b3460b8a69413c041bd91e11e68caf2f https://www.encodeproject.org/files/ENCFF385GEE/@@download/ENCFF385GEE.bigWig GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF034GFV bigWig signal p-value ENCSR920BLG ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIN3A-human ENCAB000AKR DNA False 2016-03-02 ENCODE 2 ENCFF385PRZ, ENCFF577FNG 416498004 ENCODE Processing Pipeline b6a5d156676fda14f1decfd7889c8eee https://www.encodeproject.org/files/ENCFF034GFV/@@download/ENCFF034GFV.bigWig GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF271XJX bigWig signal p-value ENCSR920BLG ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIN3A-human ENCAB000AKR DNA False 2016-03-02 ENCODE 1, 2 ENCFF156FED, ENCFF315DZX, ENCFF385PRZ, ENCFF577FNG 997518452 ENCODE Processing Pipeline bce60b7b19c8b20bae6356e19ccd8d69 https://www.encodeproject.org/files/ENCFF271XJX/@@download/ENCFF271XJX.bigWig GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF452UEO bigWig fold change over control ENCSR920BLG ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIN3A-human ENCAB000AKR DNA False 2016-03-02 ENCODE 1 ENCFF156FED, ENCFF315DZX 431093445 ENCODE Processing Pipeline 278de196aacf3d5ada6c0c901d7db800 https://www.encodeproject.org/files/ENCFF452UEO/@@download/ENCFF452UEO.bigWig GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF893PMR bigWig fold change over control ENCSR920BLG ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIN3A-human ENCAB000AKR DNA False 2016-03-02 ENCODE 2 ENCFF385PRZ, ENCFF577FNG 264009191 ENCODE Processing Pipeline 740527acde03925604ed998649caf358 https://www.encodeproject.org/files/ENCFF893PMR/@@download/ENCFF893PMR.bigWig GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF743WQN bigWig fold change over control ENCSR920BLG ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIN3A-human ENCAB000AKR DNA False 2016-03-02 ENCODE 1, 2 ENCFF156FED, ENCFF315DZX, ENCFF385PRZ, ENCFF577FNG 824203965 ENCODE Processing Pipeline e2acdef1d76c1461c980e08666707968 https://www.encodeproject.org/files/ENCFF743WQN/@@download/ENCFF743WQN.bigWig GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF006BQW bed narrowPeak peaks ENCSR920BLG ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIN3A-human ENCAB000AKR DNA False 2016-03-02 ENCODE 2 ENCFF385PRZ, ENCFF577FNG 4825137 ENCODE Processing Pipeline 00da91069b53ab211d31f1f61e1e05d7 https://www.encodeproject.org/files/ENCFF006BQW/@@download/ENCFF006BQW.bed.gz GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF930ANP bigBed narrowPeak peaks ENCSR920BLG ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIN3A-human ENCAB000AKR DNA False 2016-03-02 ENCODE 2 ENCFF006BQW 10747785 ENCODE Processing Pipeline b1a4c4629f1eb77ac8b4f71b9275a9b8 https://www.encodeproject.org/files/ENCFF930ANP/@@download/ENCFF930ANP.bigBed GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF695GOE bed narrowPeak peaks ENCSR920BLG ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIN3A-human ENCAB000AKR DNA False 2016-03-02 ENCODE 1 ENCFF156FED, ENCFF315DZX 5798010 ENCODE Processing Pipeline e2b883bccd59f19e01b7955fd7388c77 https://www.encodeproject.org/files/ENCFF695GOE/@@download/ENCFF695GOE.bed.gz GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF419HDS bed narrowPeak peaks ENCSR920BLG ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIN3A-human ENCAB000AKR DNA False 2016-03-02 ENCODE 1, 2 ENCFF156FED, ENCFF315DZX, ENCFF385PRZ, ENCFF577FNG 6734540 ENCODE Processing Pipeline ef570450c6a5057d95e592dcea641a20 https://www.encodeproject.org/files/ENCFF419HDS/@@download/ENCFF419HDS.bed.gz GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF771ZFN bigBed narrowPeak peaks ENCSR920BLG ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIN3A-human ENCAB000AKR DNA False 2016-03-02 ENCODE 1 ENCFF695GOE 13062696 ENCODE Processing Pipeline da720ff99c80b4654afad3bb83fa8b12 https://www.encodeproject.org/files/ENCFF771ZFN/@@download/ENCFF771ZFN.bigBed GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF446MUL bed narrowPeak conservative idr thresholded peaks ENCSR920BLG ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIN3A-human ENCAB000AKR DNA False 2016-03-02 ENCODE 1, 2 ENCFF006BQW, ENCFF419HDS, ENCFF419RSJ, ENCFF695GOE 213036 ENCODE Processing Pipeline b3e1cdd432d61c6e50569e9a00aafeb3 https://www.encodeproject.org/files/ENCFF446MUL/@@download/ENCFF446MUL.bed.gz GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF802JAN bed narrowPeak optimal idr thresholded peaks ENCSR920BLG ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIN3A-human ENCAB000AKR DNA False 2016-03-02 ENCODE 1, 2 ENCFF006BQW, ENCFF419HDS, ENCFF419RSJ, ENCFF695GOE 250513 ENCODE Processing Pipeline 24417aa4f4564a237fc97e6e33fd4e0c https://www.encodeproject.org/files/ENCFF802JAN/@@download/ENCFF802JAN.bed.gz GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF823LMU bigBed narrowPeak peaks ENCSR920BLG ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIN3A-human ENCAB000AKR DNA False 2016-03-02 ENCODE 1, 2 ENCFF419HDS 13114290 ENCODE Processing Pipeline d0f518c8ab7943fe8a5e6cbfbcc3b200 https://www.encodeproject.org/files/ENCFF823LMU/@@download/ENCFF823LMU.bigBed GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF045JDI bigBed narrowPeak optimal idr thresholded peaks ENCSR920BLG ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIN3A-human ENCAB000AKR DNA False 2016-03-02 ENCODE 1, 2 ENCFF802JAN 639544 ENCODE Processing Pipeline 85adb33be5eb06d0462243f8ab8dca01 https://www.encodeproject.org/files/ENCFF045JDI/@@download/ENCFF045JDI.bigBed GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF963AVA bigBed narrowPeak conservative idr thresholded peaks ENCSR920BLG ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIN3A-human ENCAB000AKR DNA False 2016-03-02 ENCODE 1, 2 ENCFF446MUL 570597 ENCODE Processing Pipeline ef3b1c5425880f1888cdbbf811bf7741 https://www.encodeproject.org/files/ENCFF963AVA/@@download/ENCFF963AVA.bigBed GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF191MPD bed narrowPeak optimal idr thresholded peaks ENCSR920BLG ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIN3A-human ENCAB000AKR DNA False 2016-03-02 ENCODE 1, 2 ENCFF001TDO, ENCFF718AFD, ENCFF791GAM, ENCFF877VHC 209919 ENCODE Processing Pipeline 73ff664a4d223fafe5f230e633552942 https://www.encodeproject.org/files/ENCFF191MPD/@@download/ENCFF191MPD.bed.gz hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF435GRA bed narrowPeak conservative idr thresholded peaks ENCSR920BLG ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIN3A-human ENCAB000AKR DNA False 2016-03-02 ENCODE 1, 2 ENCFF001TDO, ENCFF718AFD, ENCFF791GAM, ENCFF877VHC 181213 ENCODE Processing Pipeline c2b3c97807efdbd5b9476a0dcd9c6b47 https://www.encodeproject.org/files/ENCFF435GRA/@@download/ENCFF435GRA.bed.gz hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF795WTG bigBed narrowPeak optimal idr thresholded peaks ENCSR920BLG ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIN3A-human ENCAB000AKR DNA False 2016-03-02 ENCODE 1, 2 ENCFF191MPD 477739 ENCODE Processing Pipeline bc019ad36e8e1d9a420011e6890677c0 https://www.encodeproject.org/files/ENCFF795WTG/@@download/ENCFF795WTG.bigBed hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF124XAU bigBed narrowPeak conservative idr thresholded peaks ENCSR920BLG ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIN3A-human ENCAB000AKR DNA False 2016-03-02 ENCODE 1, 2 ENCFF435GRA 432611 ENCODE Processing Pipeline 0545439b470a576d07e295bf34ff75d3 https://www.encodeproject.org/files/ENCFF124XAU/@@download/ENCFF124XAU.bigBed hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF719EHQ bam unfiltered alignments ENCSR382AIB ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-DDX20-human ENCAB728YTO DNA False 2016-02-16 ENCODE 2 100 ENCFF129CFJ, ENCFF674JSK, ENCFF807MUK 3855804297 ENCODE Processing Pipeline 5c721b1969a68e1c106886da62266b5d https://www.encodeproject.org/files/ENCFF719EHQ/@@download/ENCFF719EHQ.bam hg19 released low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF776UHP bam unfiltered alignments ENCSR382AIB ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-DDX20-human ENCAB728YTO DNA False 2016-02-16 ENCODE 1 100 ENCFF077SBC, ENCFF706WJQ, ENCFF807MUK 3916472942 ENCODE Processing Pipeline 1392d368a10d683c1b271d14659d9c97 https://www.encodeproject.org/files/ENCFF776UHP/@@download/ENCFF776UHP.bam hg19 released low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF077SBC fastq reads ENCSR382AIB ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-DDX20-human ENCAB728YTO DNA False 2016-02-16 ENCODE 1 1 100 paired-ended 2 ENCFF706WJQ 1859776200 Michael Snyder, Stanford 4c6bbed0639c71c5781ac209e1554575 SRA:SRR5111506 https://www.encodeproject.org/files/ENCFF077SBC/@@download/ENCFF077SBC.fastq.gz Illumina HiSeq 2000 /files/ENCFF969JRS/ released low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF674JSK fastq reads ENCSR382AIB ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-DDX20-human ENCAB728YTO DNA False 2016-02-16 ENCODE 2 1 100 paired-ended 2 ENCFF129CFJ 1868779198 Michael Snyder, Stanford f0bda919735be3ad0f271fe63fe1f22c SRA:SRR5111507 https://www.encodeproject.org/files/ENCFF674JSK/@@download/ENCFF674JSK.fastq.gz Illumina HiSeq 2000 /files/ENCFF969JRS/ released low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF706WJQ fastq reads ENCSR382AIB ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-DDX20-human ENCAB728YTO DNA False 2016-02-16 ENCODE 1 1 100 paired-ended 1 ENCFF077SBC 1793095692 Michael Snyder, Stanford e78b26f7071d8af509deb12e51d03705 SRA:SRR5111506 https://www.encodeproject.org/files/ENCFF706WJQ/@@download/ENCFF706WJQ.fastq.gz Illumina HiSeq 2000 /files/ENCFF467ZVS/ released low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF129CFJ fastq reads ENCSR382AIB ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-DDX20-human ENCAB728YTO DNA False 2016-02-16 ENCODE 2 1 100 paired-ended 1 ENCFF674JSK 1746542075 Michael Snyder, Stanford cdb70b2abc6b74ad9ce85ec9bf4f475f SRA:SRR5111507 https://www.encodeproject.org/files/ENCFF129CFJ/@@download/ENCFF129CFJ.fastq.gz Illumina HiSeq 2000 /files/ENCFF467ZVS/ released low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF089EVB bam alignments ENCSR382AIB ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-DDX20-human ENCAB728YTO DNA False 2016-02-16 ENCODE 2 100 ENCFF129CFJ, ENCFF674JSK, ENCFF807MUK 2758758779 ENCODE Processing Pipeline 5b36905dc18ce11492b91b608ed04d89 https://www.encodeproject.org/files/ENCFF089EVB/@@download/ENCFF089EVB.bam hg19 released low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF180RGQ bam alignments ENCSR382AIB ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-DDX20-human ENCAB728YTO DNA False 2016-02-16 ENCODE 1 100 ENCFF077SBC, ENCFF706WJQ, ENCFF807MUK 2663126580 ENCODE Processing Pipeline bafd2f2a96e768e1d2398d758d45a3b9 https://www.encodeproject.org/files/ENCFF180RGQ/@@download/ENCFF180RGQ.bam hg19 released low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF266EKZ bigWig fold change over control ENCSR382AIB ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-DDX20-human ENCAB728YTO DNA False 2016-02-16 ENCODE 2 ENCFF089EVB, ENCFF548ERH 704214107 ENCODE Processing Pipeline 5a834a57b5652e7345964ac7410417c6 https://www.encodeproject.org/files/ENCFF266EKZ/@@download/ENCFF266EKZ.bigWig hg19 released low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF571WII bigWig fold change over control ENCSR382AIB ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-DDX20-human ENCAB728YTO DNA False 2016-02-16 ENCODE 1, 2 ENCFF089EVB, ENCFF180RGQ, ENCFF548ERH 1113154118 ENCODE Processing Pipeline e0e50bd34c83d1fa4201c9dd0d30d799 https://www.encodeproject.org/files/ENCFF571WII/@@download/ENCFF571WII.bigWig hg19 released low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF667SBT bed narrowPeak peaks ENCSR382AIB ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-DDX20-human ENCAB728YTO DNA False 2016-02-16 ENCODE 2 ENCFF089EVB, ENCFF548ERH 5596224 ENCODE Processing Pipeline 0590079ae7fb20d34a1ed34117199a3b https://www.encodeproject.org/files/ENCFF667SBT/@@download/ENCFF667SBT.bed.gz hg19 released low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF586VDY bigBed narrowPeak peaks ENCSR382AIB ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-DDX20-human ENCAB728YTO DNA False 2016-02-16 ENCODE 1 ENCFF316SRU 11183133 ENCODE Processing Pipeline eab9212b0b97832cce716141c190cdf9 https://www.encodeproject.org/files/ENCFF586VDY/@@download/ENCFF586VDY.bigBed hg19 released low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF626ICM bigBed narrowPeak peaks ENCSR382AIB ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-DDX20-human ENCAB728YTO DNA False 2016-02-16 ENCODE 2 ENCFF667SBT 11167570 ENCODE Processing Pipeline eb1bc2509bc742d7e3d4c8a21d6d7850 https://www.encodeproject.org/files/ENCFF626ICM/@@download/ENCFF626ICM.bigBed hg19 released low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF420CNG bigWig signal p-value ENCSR382AIB ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-DDX20-human ENCAB728YTO DNA False 2016-02-16 ENCODE 1 ENCFF180RGQ, ENCFF548ERH 715066419 ENCODE Processing Pipeline 1f90c9fa710bd2e649f659ac50f47268 https://www.encodeproject.org/files/ENCFF420CNG/@@download/ENCFF420CNG.bigWig hg19 released low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF056KYY bigWig signal p-value ENCSR382AIB ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-DDX20-human ENCAB728YTO DNA False 2016-02-16 ENCODE 1, 2 ENCFF089EVB, ENCFF180RGQ, ENCFF548ERH 1031178884 ENCODE Processing Pipeline 123c090c29a7d87aec3ccc01aaa8d60c https://www.encodeproject.org/files/ENCFF056KYY/@@download/ENCFF056KYY.bigWig hg19 released low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF814PYH bigWig fold change over control ENCSR382AIB ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-DDX20-human ENCAB728YTO DNA False 2016-02-16 ENCODE 1 ENCFF180RGQ, ENCFF548ERH 730423680 ENCODE Processing Pipeline e144dc4d0dda6700009b16df76815345 https://www.encodeproject.org/files/ENCFF814PYH/@@download/ENCFF814PYH.bigWig hg19 released low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF316SRU bed narrowPeak peaks ENCSR382AIB ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-DDX20-human ENCAB728YTO DNA False 2016-02-16 ENCODE 1 ENCFF180RGQ, ENCFF548ERH 5694368 ENCODE Processing Pipeline 846b3c258e98742cc867e2e1be70d7d5 https://www.encodeproject.org/files/ENCFF316SRU/@@download/ENCFF316SRU.bed.gz hg19 released low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF523JZB bed narrowPeak peaks ENCSR382AIB ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-DDX20-human ENCAB728YTO DNA False 2016-02-16 ENCODE 1, 2 ENCFF089EVB, ENCFF180RGQ, ENCFF548ERH 6591925 ENCODE Processing Pipeline 6dcb369ee8c1345a052f3c533b22b014 https://www.encodeproject.org/files/ENCFF523JZB/@@download/ENCFF523JZB.bed.gz hg19 released low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF829HTV bigWig signal p-value ENCSR382AIB ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-DDX20-human ENCAB728YTO DNA False 2016-02-16 ENCODE 2 ENCFF089EVB, ENCFF548ERH 657753459 ENCODE Processing Pipeline 5079b5d83664984339fc09a2022ad48e https://www.encodeproject.org/files/ENCFF829HTV/@@download/ENCFF829HTV.bigWig hg19 released low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF042YWM bigBed narrowPeak peaks ENCSR382AIB ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-DDX20-human ENCAB728YTO DNA False 2016-02-16 ENCODE 1, 2 ENCFF523JZB 13287282 ENCODE Processing Pipeline 727414e160e30ae0547f647434aac81f https://www.encodeproject.org/files/ENCFF042YWM/@@download/ENCFF042YWM.bigBed hg19 released low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF756RLM bam unfiltered alignments ENCSR382AIB ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-DDX20-human ENCAB728YTO DNA False 2016-02-16 ENCODE 1 100 ENCFF077SBC, ENCFF643CGH, ENCFF706WJQ 3919903868 ENCODE Processing Pipeline 5f152933a0b2684db770a1a84acf8dec https://www.encodeproject.org/files/ENCFF756RLM/@@download/ENCFF756RLM.bam GRCh38 released low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF542YLK bam unfiltered alignments ENCSR382AIB ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-DDX20-human ENCAB728YTO DNA False 2016-02-16 ENCODE 2 100 ENCFF129CFJ, ENCFF643CGH, ENCFF674JSK 3859677181 ENCODE Processing Pipeline c55e9eea5a92e7b7d25e3b6ee7763bfc https://www.encodeproject.org/files/ENCFF542YLK/@@download/ENCFF542YLK.bam GRCh38 released low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF810IRF bam alignments ENCSR382AIB ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-DDX20-human ENCAB728YTO DNA False 2016-02-16 ENCODE 1 100 ENCFF077SBC, ENCFF643CGH, ENCFF706WJQ 2664647704 ENCODE Processing Pipeline 1f6d6b96bde4af04d6690f155d4bd255 https://www.encodeproject.org/files/ENCFF810IRF/@@download/ENCFF810IRF.bam GRCh38 released low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF760JNE bam alignments ENCSR382AIB ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-DDX20-human ENCAB728YTO DNA False 2016-02-16 ENCODE 2 100 ENCFF129CFJ, ENCFF643CGH, ENCFF674JSK 2759991045 ENCODE Processing Pipeline d2ffc44837b3caeb47f93a3e4707d0ab https://www.encodeproject.org/files/ENCFF760JNE/@@download/ENCFF760JNE.bam GRCh38 released low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF940OZC bigWig signal p-value ENCSR382AIB ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-DDX20-human ENCAB728YTO DNA False 2016-02-16 ENCODE 1 ENCFF423TQJ, ENCFF810IRF 669489091 ENCODE Processing Pipeline b9b6f8779dca8bb02274524b7340ddae https://www.encodeproject.org/files/ENCFF940OZC/@@download/ENCFF940OZC.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF462SZS bigWig signal p-value ENCSR382AIB ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-DDX20-human ENCAB728YTO DNA False 2016-02-16 ENCODE 2 ENCFF423TQJ, ENCFF760JNE 736423301 ENCODE Processing Pipeline ce249809f02ccbd20e4a14ee642c9873 https://www.encodeproject.org/files/ENCFF462SZS/@@download/ENCFF462SZS.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF522QXV bigWig signal p-value ENCSR382AIB ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-DDX20-human ENCAB728YTO DNA False 2016-02-16 ENCODE 1, 2 ENCFF423TQJ, ENCFF760JNE, ENCFF810IRF 1028503442 ENCODE Processing Pipeline 1217cfeb9675cc37e2d3712976b93118 https://www.encodeproject.org/files/ENCFF522QXV/@@download/ENCFF522QXV.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF014HNY bigWig fold change over control ENCSR382AIB ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-DDX20-human ENCAB728YTO DNA False 2016-02-16 ENCODE 1 ENCFF423TQJ, ENCFF810IRF 731145667 ENCODE Processing Pipeline 45ce496501f5abde2e5912c96c51d355 https://www.encodeproject.org/files/ENCFF014HNY/@@download/ENCFF014HNY.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF346IUK bigWig fold change over control ENCSR382AIB ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-DDX20-human ENCAB728YTO DNA False 2016-02-16 ENCODE 2 ENCFF423TQJ, ENCFF760JNE 713966506 ENCODE Processing Pipeline cce7bce60be1c12ecc9df4ba597bc223 https://www.encodeproject.org/files/ENCFF346IUK/@@download/ENCFF346IUK.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF126WGU bigWig fold change over control ENCSR382AIB ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-DDX20-human ENCAB728YTO DNA False 2016-02-16 ENCODE 1, 2 ENCFF423TQJ, ENCFF760JNE, ENCFF810IRF 1107791717 ENCODE Processing Pipeline 813e9d5ecbf583437b19a79f7fbed999 https://www.encodeproject.org/files/ENCFF126WGU/@@download/ENCFF126WGU.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF404ETV bed narrowPeak peaks ENCSR382AIB ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-DDX20-human ENCAB728YTO DNA False 2016-02-16 ENCODE 1 ENCFF423TQJ, ENCFF810IRF 5503571 ENCODE Processing Pipeline 298365b6d9ae9e26766c015673e12c97 https://www.encodeproject.org/files/ENCFF404ETV/@@download/ENCFF404ETV.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF848WUG bed narrowPeak peaks ENCSR382AIB ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-DDX20-human ENCAB728YTO DNA False 2016-02-16 ENCODE 2 ENCFF423TQJ, ENCFF760JNE 5468581 ENCODE Processing Pipeline d1afbc43dbc56cc654c1007258b0e077 https://www.encodeproject.org/files/ENCFF848WUG/@@download/ENCFF848WUG.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF883IIP bed narrowPeak peaks ENCSR382AIB ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-DDX20-human ENCAB728YTO DNA False 2016-02-16 ENCODE 1, 2 ENCFF423TQJ, ENCFF760JNE, ENCFF810IRF 6422432 ENCODE Processing Pipeline 6388f49d3f21ebe872522425e07c00df https://www.encodeproject.org/files/ENCFF883IIP/@@download/ENCFF883IIP.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF623IYQ bigBed narrowPeak conservative idr thresholded peaks ENCSR382AIB ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-DDX20-human ENCAB728YTO DNA False 2016-02-16 ENCODE 1, 2 ENCFF007LBS 205812 ENCODE Processing Pipeline 8a9db4e6e8edc573a45c7ab8fcb8ddc1 https://www.encodeproject.org/files/ENCFF623IYQ/@@download/ENCFF623IYQ.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF944IUY bigBed narrowPeak peaks ENCSR382AIB ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-DDX20-human ENCAB728YTO DNA False 2016-02-16 ENCODE 1 ENCFF404ETV 11159993 ENCODE Processing Pipeline 8273390e97563677384f3da6e5051715 https://www.encodeproject.org/files/ENCFF944IUY/@@download/ENCFF944IUY.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF031WBV bigBed narrowPeak peaks ENCSR382AIB ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-DDX20-human ENCAB728YTO DNA False 2016-02-16 ENCODE 1, 2 ENCFF883IIP 13297265 ENCODE Processing Pipeline a0732b073ce627237fa4ba518118fcd5 https://www.encodeproject.org/files/ENCFF031WBV/@@download/ENCFF031WBV.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF546WNT bigBed narrowPeak peaks ENCSR382AIB ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-DDX20-human ENCAB728YTO DNA False 2016-02-16 ENCODE 2 ENCFF848WUG 11152204 ENCODE Processing Pipeline be5a970b56a05fa8b76c44df1fd05ffd https://www.encodeproject.org/files/ENCFF546WNT/@@download/ENCFF546WNT.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF007LBS bed narrowPeak conservative idr thresholded peaks ENCSR382AIB ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-DDX20-human ENCAB728YTO DNA False 2016-02-16 ENCODE 1, 2 ENCFF404ETV, ENCFF419RSJ, ENCFF848WUG, ENCFF883IIP 77349 ENCODE Processing Pipeline fc286d16abbb2ece5f19f58026a21c6e https://www.encodeproject.org/files/ENCFF007LBS/@@download/ENCFF007LBS.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF952MVU bed narrowPeak optimal idr thresholded peaks ENCSR382AIB ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-DDX20-human ENCAB728YTO DNA False 2016-02-16 ENCODE 1, 2 ENCFF404ETV, ENCFF419RSJ, ENCFF848WUG, ENCFF883IIP 101636 ENCODE Processing Pipeline 5f109587b86a22367553b0cbbf888dc2 https://www.encodeproject.org/files/ENCFF952MVU/@@download/ENCFF952MVU.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF240OUC bigBed narrowPeak optimal idr thresholded peaks ENCSR382AIB ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-DDX20-human ENCAB728YTO DNA False 2016-02-16 ENCODE 1, 2 ENCFF952MVU 242583 ENCODE Processing Pipeline 44d88c38143a5c2a27a187a39cad1d3d https://www.encodeproject.org/files/ENCFF240OUC/@@download/ENCFF240OUC.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF018SRT bed narrowPeak conservative idr thresholded peaks ENCSR382AIB ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-DDX20-human ENCAB728YTO DNA False 2016-02-16 ENCODE 1, 2 ENCFF001TDO, ENCFF316SRU, ENCFF523JZB, ENCFF667SBT 63131 ENCODE Processing Pipeline ae730decaca2abf01e955eb963be0284 https://www.encodeproject.org/files/ENCFF018SRT/@@download/ENCFF018SRT.bed.gz hg19 released low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF310EFP bigBed narrowPeak conservative idr thresholded peaks ENCSR382AIB ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-DDX20-human ENCAB728YTO DNA False 2016-02-16 ENCODE 1, 2 ENCFF018SRT 153546 ENCODE Processing Pipeline 8dceb243f18b348a68a122f786a569c6 https://www.encodeproject.org/files/ENCFF310EFP/@@download/ENCFF310EFP.bigBed hg19 released low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF009DUY bed narrowPeak optimal idr thresholded peaks ENCSR382AIB ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-DDX20-human ENCAB728YTO DNA False 2016-02-16 ENCODE 1, 2 ENCFF001TDO, ENCFF316SRU, ENCFF523JZB, ENCFF667SBT 81569 ENCODE Processing Pipeline 5ec5b91ac03669cedec82fbe43737f45 https://www.encodeproject.org/files/ENCFF009DUY/@@download/ENCFF009DUY.bed.gz hg19 released low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF089MRG bigBed narrowPeak optimal idr thresholded peaks ENCSR382AIB ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-DDX20-human ENCAB728YTO DNA False 2016-02-16 ENCODE 1, 2 ENCFF009DUY 177677 ENCODE Processing Pipeline 60127124dbd157ff21b73f563c911a02 https://www.encodeproject.org/files/ENCFF089MRG/@@download/ENCFF089MRG.bigBed hg19 released low read depth, mild to moderate bottlenecking, missing genetic modification characterization, moderate library complexity ENCFF644FQD fastq reads ENCSR052PTN ChIP-seq EFO:0002067 K562 cell line Homo sapiens PCBP1-human ENCAB000BFX DNA SDS formaldehyde False 2018-01-16 ENCODE 1 1 40 single-ended 479806527 Xiang-Dong Fu, UCSD 74fd6353c9e02115e3e6070e4b7098be https://www.encodeproject.org/files/ENCFF644FQD/@@download/ENCFF644FQD.fastq.gz Illumina HiSeq 2000 /files/ENCFF317LUD/ released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF641MET fastq reads ENCSR052PTN ChIP-seq EFO:0002067 K562 cell line Homo sapiens PCBP1-human ENCAB000BFX DNA SDS formaldehyde False 2018-01-16 ENCODE 2 1 40 single-ended 389790194 Xiang-Dong Fu, UCSD c52aa5db5ca47d088557aff24dffca14 https://www.encodeproject.org/files/ENCFF641MET/@@download/ENCFF641MET.fastq.gz Illumina HiSeq 2000 /files/ENCFF338QTL/ released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF889CIT fastq reads ENCSR052PTN ChIP-seq EFO:0002067 K562 cell line Homo sapiens PCBP1-human ENCAB000BFX DNA SDS formaldehyde False 2018-01-16 ENCODE 2 1 40 single-ended 1199204608 Xiang-Dong Fu, UCSD 1a47a87f9299ccb428ef66f1b3eac23e https://www.encodeproject.org/files/ENCFF889CIT/@@download/ENCFF889CIT.fastq.gz Illumina HiSeq 2500 /files/ENCFF338QTL/ released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF481WGG fastq reads ENCSR052PTN ChIP-seq EFO:0002067 K562 cell line Homo sapiens PCBP1-human ENCAB000BFX DNA SDS formaldehyde False 2018-01-16 ENCODE 1 1 40 single-ended 1307706891 Xiang-Dong Fu, UCSD e964224d7d63920fcf2606ec09e7c0ed https://www.encodeproject.org/files/ENCFF481WGG/@@download/ENCFF481WGG.fastq.gz Illumina HiSeq 2500 /files/ENCFF317LUD/ released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF984LCY bam unfiltered alignments ENCSR052PTN ChIP-seq EFO:0002067 K562 cell line Homo sapiens PCBP1-human ENCAB000BFX DNA SDS formaldehyde False 2018-01-16 ENCODE 2 40 ENCFF641MET, ENCFF807MUK, ENCFF889CIT 1541656143 ENCODE Processing Pipeline 9143a731c489fdd20972c3cc6062b311 https://www.encodeproject.org/files/ENCFF984LCY/@@download/ENCFF984LCY.bam hg19 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF732PIN bam unfiltered alignments ENCSR052PTN ChIP-seq EFO:0002067 K562 cell line Homo sapiens PCBP1-human ENCAB000BFX DNA SDS formaldehyde False 2018-01-16 ENCODE 2 40 ENCFF641MET, ENCFF643CGH, ENCFF889CIT 1550028118 ENCODE Processing Pipeline 366465a98f7f1f11b90a1283ecffcd49 https://www.encodeproject.org/files/ENCFF732PIN/@@download/ENCFF732PIN.bam GRCh38 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF539TFD bam alignments ENCSR052PTN ChIP-seq EFO:0002067 K562 cell line Homo sapiens PCBP1-human ENCAB000BFX DNA SDS formaldehyde False 2018-01-16 ENCODE 2 40 ENCFF641MET, ENCFF643CGH, ENCFF889CIT 430362376 ENCODE Processing Pipeline 5ee1b599b133c89241da620fea4be17e https://www.encodeproject.org/files/ENCFF539TFD/@@download/ENCFF539TFD.bam GRCh38 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF806CJS bam alignments ENCSR052PTN ChIP-seq EFO:0002067 K562 cell line Homo sapiens PCBP1-human ENCAB000BFX DNA SDS formaldehyde False 2018-01-16 ENCODE 2 40 ENCFF641MET, ENCFF807MUK, ENCFF889CIT 430948053 ENCODE Processing Pipeline b97a2819a9129a4accd263b32d58f77a https://www.encodeproject.org/files/ENCFF806CJS/@@download/ENCFF806CJS.bam hg19 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF150WBW bam unfiltered alignments ENCSR052PTN ChIP-seq EFO:0002067 K562 cell line Homo sapiens PCBP1-human ENCAB000BFX DNA SDS formaldehyde False 2018-01-16 ENCODE 1 40 ENCFF481WGG, ENCFF644FQD, ENCFF807MUK 1688322217 ENCODE Processing Pipeline 948bbdd15ff9c434a48419274b0a3c3a https://www.encodeproject.org/files/ENCFF150WBW/@@download/ENCFF150WBW.bam hg19 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF119AKS bam alignments ENCSR052PTN ChIP-seq EFO:0002067 K562 cell line Homo sapiens PCBP1-human ENCAB000BFX DNA SDS formaldehyde False 2018-01-16 ENCODE 1 40 ENCFF481WGG, ENCFF644FQD, ENCFF807MUK 400961139 ENCODE Processing Pipeline 7f086fec185ed6473a6414ca3b06b55f https://www.encodeproject.org/files/ENCFF119AKS/@@download/ENCFF119AKS.bam hg19 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF881LTT bam alignments ENCSR052PTN ChIP-seq EFO:0002067 K562 cell line Homo sapiens PCBP1-human ENCAB000BFX DNA SDS formaldehyde False 2018-01-16 ENCODE 1 40 ENCFF481WGG, ENCFF643CGH, ENCFF644FQD 400380975 ENCODE Processing Pipeline 85c5c45fdcda801aafd23a98527626ce https://www.encodeproject.org/files/ENCFF881LTT/@@download/ENCFF881LTT.bam GRCh38 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF289DTU bam unfiltered alignments ENCSR052PTN ChIP-seq EFO:0002067 K562 cell line Homo sapiens PCBP1-human ENCAB000BFX DNA SDS formaldehyde False 2018-01-16 ENCODE 1 40 ENCFF481WGG, ENCFF643CGH, ENCFF644FQD 1697037200 ENCODE Processing Pipeline b7c1efc037c0f35424c26ea12f4e3f56 https://www.encodeproject.org/files/ENCFF289DTU/@@download/ENCFF289DTU.bam GRCh38 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF039SFF bigWig signal p-value ENCSR052PTN ChIP-seq EFO:0002067 K562 cell line Homo sapiens PCBP1-human ENCAB000BFX DNA SDS formaldehyde False 2018-01-16 ENCODE 1, 2 ENCFF345ODV, ENCFF539TFD, ENCFF836GUS, ENCFF881LTT 913519412 ENCODE Processing Pipeline 0477ea2fa3431d2144b09fae12d2dc0f https://www.encodeproject.org/files/ENCFF039SFF/@@download/ENCFF039SFF.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF910GMC bigWig fold change over control ENCSR052PTN ChIP-seq EFO:0002067 K562 cell line Homo sapiens PCBP1-human ENCAB000BFX DNA SDS formaldehyde False 2018-01-16 ENCODE 1 ENCFF836GUS, ENCFF881LTT 302637424 ENCODE Processing Pipeline 8a32f145963d8453c9fbb498b8fc5fde https://www.encodeproject.org/files/ENCFF910GMC/@@download/ENCFF910GMC.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF722HLE bed narrowPeak peaks ENCSR052PTN ChIP-seq EFO:0002067 K562 cell line Homo sapiens PCBP1-human ENCAB000BFX DNA SDS formaldehyde False 2018-01-16 ENCODE 1 ENCFF836GUS, ENCFF881LTT 5566832 ENCODE Processing Pipeline 7c784a51d26cf8d8a63d3e7c2a305e87 https://www.encodeproject.org/files/ENCFF722HLE/@@download/ENCFF722HLE.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF121LOV bigBed narrowPeak optimal idr thresholded peaks ENCSR052PTN ChIP-seq EFO:0002067 K562 cell line Homo sapiens PCBP1-human ENCAB000BFX DNA SDS formaldehyde False 2018-01-16 ENCODE 1, 2 ENCFF467RYH 428194 ENCODE Processing Pipeline 7a6262b93860f68b888d3bc2a3f3ed58 https://www.encodeproject.org/files/ENCFF121LOV/@@download/ENCFF121LOV.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF839MTO bigWig signal p-value ENCSR052PTN ChIP-seq EFO:0002067 K562 cell line Homo sapiens PCBP1-human ENCAB000BFX DNA SDS formaldehyde False 2018-01-16 ENCODE 2 ENCFF345ODV, ENCFF539TFD 515254886 ENCODE Processing Pipeline f3b4b002c08c713f0e49d3a4d551b938 https://www.encodeproject.org/files/ENCFF839MTO/@@download/ENCFF839MTO.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF661UAG bed narrowPeak peaks ENCSR052PTN ChIP-seq EFO:0002067 K562 cell line Homo sapiens PCBP1-human ENCAB000BFX DNA SDS formaldehyde False 2018-01-16 ENCODE 2 ENCFF345ODV, ENCFF539TFD 5662694 ENCODE Processing Pipeline e432a30d48407554b83aa8189b704eba https://www.encodeproject.org/files/ENCFF661UAG/@@download/ENCFF661UAG.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF144CHJ bed narrowPeak conservative idr thresholded peaks ENCSR052PTN ChIP-seq EFO:0002067 K562 cell line Homo sapiens PCBP1-human ENCAB000BFX DNA SDS formaldehyde False 2018-01-16 ENCODE 1, 2 ENCFF419RSJ, ENCFF661UAG, ENCFF722HLE, ENCFF748GCS 175798 ENCODE Processing Pipeline cff1deee18aa5cd41bc45d6dcee0c725 https://www.encodeproject.org/files/ENCFF144CHJ/@@download/ENCFF144CHJ.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF334DTH bigBed narrowPeak peaks ENCSR052PTN ChIP-seq EFO:0002067 K562 cell line Homo sapiens PCBP1-human ENCAB000BFX DNA SDS formaldehyde False 2018-01-16 ENCODE 1 ENCFF722HLE 13137412 ENCODE Processing Pipeline 457f937aa0bd08bdbe35e739c87fe31e https://www.encodeproject.org/files/ENCFF334DTH/@@download/ENCFF334DTH.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF543YPC bigBed narrowPeak peaks ENCSR052PTN ChIP-seq EFO:0002067 K562 cell line Homo sapiens PCBP1-human ENCAB000BFX DNA SDS formaldehyde False 2018-01-16 ENCODE 1, 2 ENCFF748GCS 13311040 ENCODE Processing Pipeline 85aa8277aab1f4c0282314190a4a0efd https://www.encodeproject.org/files/ENCFF543YPC/@@download/ENCFF543YPC.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF467RYH bed narrowPeak optimal idr thresholded peaks ENCSR052PTN ChIP-seq EFO:0002067 K562 cell line Homo sapiens PCBP1-human ENCAB000BFX DNA SDS formaldehyde False 2018-01-16 ENCODE 1, 2 ENCFF419RSJ, ENCFF661UAG, ENCFF722HLE, ENCFF748GCS 189337 ENCODE Processing Pipeline 45e9c0449a5d16f8e53288cbc33ef4aa https://www.encodeproject.org/files/ENCFF467RYH/@@download/ENCFF467RYH.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF521VPM bigWig fold change over control ENCSR052PTN ChIP-seq EFO:0002067 K562 cell line Homo sapiens PCBP1-human ENCAB000BFX DNA SDS formaldehyde False 2018-01-16 ENCODE 1, 2 ENCFF345ODV, ENCFF539TFD, ENCFF836GUS, ENCFF881LTT 741593469 ENCODE Processing Pipeline 741f2406a5caa1c094acbd5f1164a0e4 https://www.encodeproject.org/files/ENCFF521VPM/@@download/ENCFF521VPM.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF748GCS bed narrowPeak peaks ENCSR052PTN ChIP-seq EFO:0002067 K562 cell line Homo sapiens PCBP1-human ENCAB000BFX DNA SDS formaldehyde False 2018-01-16 ENCODE 1, 2 ENCFF345ODV, ENCFF539TFD, ENCFF836GUS, ENCFF881LTT 6763134 ENCODE Processing Pipeline c96da195441499e8615a28c05c554685 https://www.encodeproject.org/files/ENCFF748GCS/@@download/ENCFF748GCS.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF350OTU bigBed narrowPeak peaks ENCSR052PTN ChIP-seq EFO:0002067 K562 cell line Homo sapiens PCBP1-human ENCAB000BFX DNA SDS formaldehyde False 2018-01-16 ENCODE 2 ENCFF661UAG 13222847 ENCODE Processing Pipeline 4a1e3112ee43581b24124b841498108b https://www.encodeproject.org/files/ENCFF350OTU/@@download/ENCFF350OTU.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF500CGR bigBed narrowPeak conservative idr thresholded peaks ENCSR052PTN ChIP-seq EFO:0002067 K562 cell line Homo sapiens PCBP1-human ENCAB000BFX DNA SDS formaldehyde False 2018-01-16 ENCODE 1, 2 ENCFF144CHJ 404748 ENCODE Processing Pipeline d773486eb0c4f260961784812cc214cb https://www.encodeproject.org/files/ENCFF500CGR/@@download/ENCFF500CGR.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF120HAV bigWig signal p-value ENCSR052PTN ChIP-seq EFO:0002067 K562 cell line Homo sapiens PCBP1-human ENCAB000BFX DNA SDS formaldehyde False 2018-01-16 ENCODE 1 ENCFF836GUS, ENCFF881LTT 474086061 ENCODE Processing Pipeline cbc62530c816608ec06dde54a03a9cb6 https://www.encodeproject.org/files/ENCFF120HAV/@@download/ENCFF120HAV.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF480SRL bigWig fold change over control ENCSR052PTN ChIP-seq EFO:0002067 K562 cell line Homo sapiens PCBP1-human ENCAB000BFX DNA SDS formaldehyde False 2018-01-16 ENCODE 2 ENCFF345ODV, ENCFF539TFD 335299948 ENCODE Processing Pipeline 55428f514bdfa2ccd2e929dd7daf37ee https://www.encodeproject.org/files/ENCFF480SRL/@@download/ENCFF480SRL.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF402WTE bigWig signal p-value ENCSR052PTN ChIP-seq EFO:0002067 K562 cell line Homo sapiens PCBP1-human ENCAB000BFX DNA SDS formaldehyde False 2018-01-16 ENCODE 1 ENCFF119AKS, ENCFF502LLI 480548163 ENCODE Processing Pipeline d6b7b957f79b13fc8e9ce9ec9b0993f8 https://www.encodeproject.org/files/ENCFF402WTE/@@download/ENCFF402WTE.bigWig hg19 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF609JWE bigWig fold change over control ENCSR052PTN ChIP-seq EFO:0002067 K562 cell line Homo sapiens PCBP1-human ENCAB000BFX DNA SDS formaldehyde False 2018-01-16 ENCODE 1 ENCFF119AKS, ENCFF502LLI 299978306 ENCODE Processing Pipeline fed6f88795bbb98aa95b5ea7f979563c https://www.encodeproject.org/files/ENCFF609JWE/@@download/ENCFF609JWE.bigWig hg19 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF430KJL bigWig signal p-value ENCSR052PTN ChIP-seq EFO:0002067 K562 cell line Homo sapiens PCBP1-human ENCAB000BFX DNA SDS formaldehyde False 2018-01-16 ENCODE 2 ENCFF325CNX, ENCFF806CJS 496031149 ENCODE Processing Pipeline 48ee57de2668fcbabba06fe6e3cace7c https://www.encodeproject.org/files/ENCFF430KJL/@@download/ENCFF430KJL.bigWig hg19 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF388PGZ bigBed narrowPeak peaks ENCSR052PTN ChIP-seq EFO:0002067 K562 cell line Homo sapiens PCBP1-human ENCAB000BFX DNA SDS formaldehyde False 2018-01-16 ENCODE 1 ENCFF921JTC 13096503 ENCODE Processing Pipeline fa7c917207733579aa4891fab4c1b151 https://www.encodeproject.org/files/ENCFF388PGZ/@@download/ENCFF388PGZ.bigBed hg19 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF850EDP bigWig signal p-value ENCSR052PTN ChIP-seq EFO:0002067 K562 cell line Homo sapiens PCBP1-human ENCAB000BFX DNA SDS formaldehyde False 2018-01-16 ENCODE 1, 2 ENCFF119AKS, ENCFF325CNX, ENCFF502LLI, ENCFF806CJS 925720480 ENCODE Processing Pipeline 0da8663542d8905b27e3906bd760176f https://www.encodeproject.org/files/ENCFF850EDP/@@download/ENCFF850EDP.bigWig hg19 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF340HZR bigWig fold change over control ENCSR052PTN ChIP-seq EFO:0002067 K562 cell line Homo sapiens PCBP1-human ENCAB000BFX DNA SDS formaldehyde False 2018-01-16 ENCODE 1, 2 ENCFF119AKS, ENCFF325CNX, ENCFF502LLI, ENCFF806CJS 761014181 ENCODE Processing Pipeline 4567b3e050ecd7cc7c175425a8112eff https://www.encodeproject.org/files/ENCFF340HZR/@@download/ENCFF340HZR.bigWig hg19 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF086XWF bed narrowPeak peaks ENCSR052PTN ChIP-seq EFO:0002067 K562 cell line Homo sapiens PCBP1-human ENCAB000BFX DNA SDS formaldehyde False 2018-01-16 ENCODE 1, 2 ENCFF119AKS, ENCFF325CNX, ENCFF502LLI, ENCFF806CJS 6830133 ENCODE Processing Pipeline b03e7e2558323f6378a66f70b35e72d4 https://www.encodeproject.org/files/ENCFF086XWF/@@download/ENCFF086XWF.bed.gz hg19 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF612KIF bigBed narrowPeak peaks ENCSR052PTN ChIP-seq EFO:0002067 K562 cell line Homo sapiens PCBP1-human ENCAB000BFX DNA SDS formaldehyde False 2018-01-16 ENCODE 2 ENCFF656LKP 13206018 ENCODE Processing Pipeline 1c20baa66d94311375180f35e4079530 https://www.encodeproject.org/files/ENCFF612KIF/@@download/ENCFF612KIF.bigBed hg19 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF048VNL bigBed narrowPeak optimal idr thresholded peaks ENCSR052PTN ChIP-seq EFO:0002067 K562 cell line Homo sapiens PCBP1-human ENCAB000BFX DNA SDS formaldehyde False 2018-01-16 ENCODE 1, 2 ENCFF941RVL 437226 ENCODE Processing Pipeline e194ed316dc96872a1430e99921e3ecf https://www.encodeproject.org/files/ENCFF048VNL/@@download/ENCFF048VNL.bigBed hg19 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF882OWS bigWig fold change over control ENCSR052PTN ChIP-seq EFO:0002067 K562 cell line Homo sapiens PCBP1-human ENCAB000BFX DNA SDS formaldehyde False 2018-01-16 ENCODE 2 ENCFF325CNX, ENCFF806CJS 335221435 ENCODE Processing Pipeline 654b5a4b7075df6dc8afba7f45f7da65 https://www.encodeproject.org/files/ENCFF882OWS/@@download/ENCFF882OWS.bigWig hg19 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF921JTC bed narrowPeak peaks ENCSR052PTN ChIP-seq EFO:0002067 K562 cell line Homo sapiens PCBP1-human ENCAB000BFX DNA SDS formaldehyde False 2018-01-16 ENCODE 1 ENCFF119AKS, ENCFF502LLI 5614290 ENCODE Processing Pipeline ad20690d2c1bcb19d44409d9c0d69cd4 https://www.encodeproject.org/files/ENCFF921JTC/@@download/ENCFF921JTC.bed.gz hg19 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF476JMC bigBed narrowPeak peaks ENCSR052PTN ChIP-seq EFO:0002067 K562 cell line Homo sapiens PCBP1-human ENCAB000BFX DNA SDS formaldehyde False 2018-01-16 ENCODE 1, 2 ENCFF086XWF 13260875 ENCODE Processing Pipeline 5aa05599d13ed0bd5afe5a553e5292c0 https://www.encodeproject.org/files/ENCFF476JMC/@@download/ENCFF476JMC.bigBed hg19 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF941RVL bed narrowPeak optimal idr thresholded peaks ENCSR052PTN ChIP-seq EFO:0002067 K562 cell line Homo sapiens PCBP1-human ENCAB000BFX DNA SDS formaldehyde False 2018-01-16 ENCODE 1, 2 ENCFF001TDO, ENCFF086XWF, ENCFF656LKP, ENCFF921JTC 198461 ENCODE Processing Pipeline 8fd9450404706c39c0454c49bc4f916f https://www.encodeproject.org/files/ENCFF941RVL/@@download/ENCFF941RVL.bed.gz hg19 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF395QCV bigBed narrowPeak conservative idr thresholded peaks ENCSR052PTN ChIP-seq EFO:0002067 K562 cell line Homo sapiens PCBP1-human ENCAB000BFX DNA SDS formaldehyde False 2018-01-16 ENCODE 1, 2 ENCFF632GIY 416550 ENCODE Processing Pipeline 21ff9e9a877cf8a0436cb557d1a89750 https://www.encodeproject.org/files/ENCFF395QCV/@@download/ENCFF395QCV.bigBed hg19 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF656LKP bed narrowPeak peaks ENCSR052PTN ChIP-seq EFO:0002067 K562 cell line Homo sapiens PCBP1-human ENCAB000BFX DNA SDS formaldehyde False 2018-01-16 ENCODE 2 ENCFF325CNX, ENCFF806CJS 5732253 ENCODE Processing Pipeline 4cbc1e54392aa9472a8b9c37e4fbbb43 https://www.encodeproject.org/files/ENCFF656LKP/@@download/ENCFF656LKP.bed.gz hg19 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF632GIY bed narrowPeak conservative idr thresholded peaks ENCSR052PTN ChIP-seq EFO:0002067 K562 cell line Homo sapiens PCBP1-human ENCAB000BFX DNA SDS formaldehyde False 2018-01-16 ENCODE 1, 2 ENCFF001TDO, ENCFF086XWF, ENCFF656LKP, ENCFF921JTC 185662 ENCODE Processing Pipeline 9c61aa669e2517a32c9f6b40efc1809e https://www.encodeproject.org/files/ENCFF632GIY/@@download/ENCFF632GIY.bed.gz hg19 released low read depth, mild to moderate bottlenecking, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF000QBM bam alignments ENCSR000BLP ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAX-human ENCAB000AIL DNA see document see document False 2011-07-18 ENCODE 1 ENCFF000QBZ 818726880 Richard Myers, HAIB 157723e8ab7cbfc06fb94d061c7569e6 https://www.encodeproject.org/files/ENCFF000QBM/@@download/ENCFF000QBM.bam hg19 archived control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample ENCFF000QBO bigBed broadPeak peaks ENCSR000BLP ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAX-human ENCAB000AIL DNA see document see document False 2011-07-18 ENCODE 1 1 ENCFF001UKH 1305679 Richard Myers, HAIB 8683ee678f122d328b96f55efe2aa545 https://www.encodeproject.org/files/ENCFF000QBO/@@download/ENCFF000QBO.bigBed hg19 archived control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample ENCFF000QBP bigBed broadPeak peaks ENCSR000BLP ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAX-human ENCAB000AIL DNA see document see document False 2011-07-18 ENCODE 2 1 ENCFF001UKI 1629054 Richard Myers, HAIB 76a4206d9f4bcff0917cb1206c7d79cd https://www.encodeproject.org/files/ENCFF000QBP/@@download/ENCFF000QBP.bigBed hg19 archived control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample ENCFF000QBR bigWig raw signal ENCSR000BLP ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAX-human ENCAB000AIL DNA see document see document False 2011-07-18 ENCODE 1 1 33848515 Richard Myers, HAIB f023d3a5cb5f65f493e0a39d43ecccf8 https://www.encodeproject.org/files/ENCFF000QBR/@@download/ENCFF000QBR.bigWig hg19 archived control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample, missing derived_from ENCFF000QBS bam alignments ENCSR000BLP ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAX-human ENCAB000AIL DNA see document see document False 2011-07-18 ENCODE 2 ENCFF000QCC 1275122295 Richard Myers, HAIB f60da14de4ad32835f45cc232ae01c43 https://www.encodeproject.org/files/ENCFF000QBS/@@download/ENCFF000QBS.bam hg19 archived control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample ENCFF000QBU bigWig raw signal ENCSR000BLP ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAX-human ENCAB000AIL DNA see document see document False 2011-07-18 ENCODE 2 1 77217410 Richard Myers, HAIB a386dacad8fd01a7a71a8c47a6c523bf https://www.encodeproject.org/files/ENCFF000QBU/@@download/ENCFF000QBU.bigWig hg19 archived control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample, missing derived_from ENCFF000QBZ fastq reads ENCSR000BLP ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAX-human ENCAB000AIL DNA see document see document False 2011-07-18 ENCODE 1 1 36 single-ended 808289836 Richard Myers, HAIB e3e67d3e094d5c916ccf3cbeabff4657 https://www.encodeproject.org/files/ENCFF000QBZ/@@download/ENCFF000QBZ.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000QET/ released control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample ENCFF000QCC fastq reads ENCSR000BLP ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAX-human ENCAB000AIL DNA see document see document False 2011-07-18 ENCODE 2 1 36 single-ended 1271882689 Richard Myers, HAIB 85666be4ae98fb197384f891f6b4cfe5 https://www.encodeproject.org/files/ENCFF000QCC/@@download/ENCFF000QCC.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000QEU/ released control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample ENCFF001UKH bed broadPeak peaks ENCSR000BLP ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAX-human ENCAB000AIL DNA see document see document False 2011-07-18 ENCODE 1 1 717099 Richard Myers, HAIB da0ebd35f57b33b05d05393da1f33a60 https://www.encodeproject.org/files/ENCFF001UKH/@@download/ENCFF001UKH.bed.gz hg19 archived control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample, missing derived_from ENCFF001UKI bed broadPeak peaks ENCSR000BLP ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAX-human ENCAB000AIL DNA see document see document False 2011-07-18 ENCODE 2 1 1043464 Richard Myers, HAIB d6fab7be071c8d4b24ff4f389efd1250 https://www.encodeproject.org/files/ENCFF001UKI/@@download/ENCFF001UKI.bed.gz hg19 archived control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample, missing derived_from ENCFF002CMC bed narrowPeak optimal idr thresholded peaks ENCSR000BLP ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAX-human ENCAB000AIL DNA see document see document False 2011-07-18 ENCODE 1187908 ENCODE Consortium Analysis Working Group ad3cebc9cc63d00128334a3f1539e7af https://www.encodeproject.org/files/ENCFF002CMC/@@download/ENCFF002CMC.bed.gz hg19 archived control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample, missing derived_from ENCFF335HMQ bigBed narrowPeak optimal idr thresholded peaks ENCSR000BLP ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAX-human ENCAB000AIL DNA see document see document False 2011-07-18 ENCODE ENCFF002CMC 2937336 ENCODE Consortium 8fbce0bf5524ec88c04436e0c8e32a09 https://www.encodeproject.org/files/ENCFF335HMQ/@@download/ENCFF335HMQ.bigBed hg19 archived control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample ENCFF393FKW bam unfiltered alignments ENCSR000BLP ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAX-human ENCAB000AIL DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000QBZ, ENCFF643CGH 1029801434 ENCODE Processing Pipeline b6872ae7dd9d23730bace1de4b8119ee https://www.encodeproject.org/files/ENCFF393FKW/@@download/ENCFF393FKW.bam GRCh38 released control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample ENCFF178VEA bam alignments ENCSR000BLP ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAX-human ENCAB000AIL DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000QBZ, ENCFF643CGH 481515882 ENCODE Processing Pipeline 8c11b01b11fba5b2e00ad9553b0d30ad https://www.encodeproject.org/files/ENCFF178VEA/@@download/ENCFF178VEA.bam GRCh38 released control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample ENCFF535RJW bam unfiltered alignments ENCSR000BLP ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAX-human ENCAB000AIL DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000QCC, ENCFF643CGH 1598125550 ENCODE Processing Pipeline e2e3c88bce29aca08752b1e725389ffe https://www.encodeproject.org/files/ENCFF535RJW/@@download/ENCFF535RJW.bam GRCh38 released control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample ENCFF797FEY bam alignments ENCSR000BLP ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAX-human ENCAB000AIL DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000QCC, ENCFF643CGH 971792096 ENCODE Processing Pipeline 8a018a2c20ebe932ee90cc5faae07ed3 https://www.encodeproject.org/files/ENCFF797FEY/@@download/ENCFF797FEY.bam GRCh38 released control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample ENCFF825FLR bam alignments ENCSR000BLP ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAX-human ENCAB000AIL DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000QBZ, ENCFF807MUK 481989402 ENCODE Processing Pipeline 7fc703b190f76e02ff8ec58489d4b082 https://www.encodeproject.org/files/ENCFF825FLR/@@download/ENCFF825FLR.bam hg19 released control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample ENCFF106ZVG bam unfiltered alignments ENCSR000BLP ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAX-human ENCAB000AIL DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000QBZ, ENCFF807MUK 1027257145 ENCODE Processing Pipeline b7c4148db749b0d662d6bd948968f468 https://www.encodeproject.org/files/ENCFF106ZVG/@@download/ENCFF106ZVG.bam hg19 released control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample ENCFF715OQW bam unfiltered alignments ENCSR000BLP ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAX-human ENCAB000AIL DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000QCC, ENCFF807MUK 1595301012 ENCODE Processing Pipeline 5b0bb7cd806d3bc7cb2b863bfffadf1a https://www.encodeproject.org/files/ENCFF715OQW/@@download/ENCFF715OQW.bam hg19 released control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample ENCFF112YUX bam alignments ENCSR000BLP ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAX-human ENCAB000AIL DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000QCC, ENCFF807MUK 972562441 ENCODE Processing Pipeline a61a001d48f6961b8e41a159a2bac1a3 https://www.encodeproject.org/files/ENCFF112YUX/@@download/ENCFF112YUX.bam hg19 released control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample ENCFF656MEH bigWig signal p-value ENCSR000BLP ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAX-human ENCAB000AIL DNA see document see document False 2011-07-18 ENCODE 1 ENCFF178VEA, ENCFF913HVS 353932059 ENCODE Processing Pipeline fab6070fd5cfbfe8846c0760d4115034 https://www.encodeproject.org/files/ENCFF656MEH/@@download/ENCFF656MEH.bigWig GRCh38 released control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample ENCFF489FFF bigWig signal p-value ENCSR000BLP ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAX-human ENCAB000AIL DNA see document see document False 2011-07-18 ENCODE 2 ENCFF234NVU, ENCFF797FEY, ENCFF913HVS 647192205 ENCODE Processing Pipeline 21f67eecae2c17c1eab3f89f7976b51c https://www.encodeproject.org/files/ENCFF489FFF/@@download/ENCFF489FFF.bigWig GRCh38 released control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample ENCFF043FNE bigWig signal p-value ENCSR000BLP ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAX-human ENCAB000AIL DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF178VEA, ENCFF234NVU, ENCFF797FEY, ENCFF913HVS 686224753 ENCODE Processing Pipeline a28aae1dc7372d288179b27c3492bf48 https://www.encodeproject.org/files/ENCFF043FNE/@@download/ENCFF043FNE.bigWig GRCh38 released control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample ENCFF049FYV bigWig fold change over control ENCSR000BLP ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAX-human ENCAB000AIL DNA see document see document False 2011-07-18 ENCODE 1 ENCFF178VEA, ENCFF913HVS 195143996 ENCODE Processing Pipeline 2c49dcec0f44c36e57c0c9a60526284e https://www.encodeproject.org/files/ENCFF049FYV/@@download/ENCFF049FYV.bigWig GRCh38 released control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample ENCFF539BFH bigWig fold change over control ENCSR000BLP ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAX-human ENCAB000AIL DNA see document see document False 2011-07-18 ENCODE 2 ENCFF234NVU, ENCFF797FEY, ENCFF913HVS 445640730 ENCODE Processing Pipeline 869d3e7c5d4bb133d421b739d14ab897 https://www.encodeproject.org/files/ENCFF539BFH/@@download/ENCFF539BFH.bigWig GRCh38 released control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample ENCFF070ERF bigWig fold change over control ENCSR000BLP ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAX-human ENCAB000AIL DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF178VEA, ENCFF234NVU, ENCFF797FEY, ENCFF913HVS 584396899 ENCODE Processing Pipeline ddd64a870c3094418fc8d313458e4075 https://www.encodeproject.org/files/ENCFF070ERF/@@download/ENCFF070ERF.bigWig GRCh38 released control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample ENCFF335ASE bed narrowPeak peaks ENCSR000BLP ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAX-human ENCAB000AIL DNA see document see document False 2011-07-18 ENCODE 1 ENCFF178VEA, ENCFF913HVS 5205652 ENCODE Processing Pipeline 99b677e39d8e1bb71cf78b6c60adf7f3 https://www.encodeproject.org/files/ENCFF335ASE/@@download/ENCFF335ASE.bed.gz GRCh38 released control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample ENCFF619NIZ bed narrowPeak peaks ENCSR000BLP ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAX-human ENCAB000AIL DNA see document see document False 2011-07-18 ENCODE 2 ENCFF234NVU, ENCFF797FEY, ENCFF913HVS 6453589 ENCODE Processing Pipeline 51e6a3dc883808afb2060f66baf0b69a https://www.encodeproject.org/files/ENCFF619NIZ/@@download/ENCFF619NIZ.bed.gz GRCh38 released control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample ENCFF933FSJ bed narrowPeak peaks ENCSR000BLP ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAX-human ENCAB000AIL DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF178VEA, ENCFF234NVU, ENCFF797FEY, ENCFF913HVS 6711034 ENCODE Processing Pipeline 4b9450419227b060b82892d3876f7cef https://www.encodeproject.org/files/ENCFF933FSJ/@@download/ENCFF933FSJ.bed.gz GRCh38 released control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample ENCFF770HSR bigBed narrowPeak peaks ENCSR000BLP ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAX-human ENCAB000AIL DNA see document see document False 2011-07-18 ENCODE 1 ENCFF335ASE 12769179 ENCODE Processing Pipeline a8271e139842ce8b43705f0a627f6e80 https://www.encodeproject.org/files/ENCFF770HSR/@@download/ENCFF770HSR.bigBed GRCh38 released control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample ENCFF706JQB bigBed narrowPeak peaks ENCSR000BLP ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAX-human ENCAB000AIL DNA see document see document False 2011-07-18 ENCODE 2 ENCFF619NIZ 12824313 ENCODE Processing Pipeline a4f40b114e767cc6dc5ed4d9c2f04621 https://www.encodeproject.org/files/ENCFF706JQB/@@download/ENCFF706JQB.bigBed GRCh38 released control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample ENCFF987SRA bigBed narrowPeak peaks ENCSR000BLP ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAX-human ENCAB000AIL DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF933FSJ 12940768 ENCODE Processing Pipeline 61bd3af1d05258026dec551b51958508 https://www.encodeproject.org/files/ENCFF987SRA/@@download/ENCFF987SRA.bigBed GRCh38 released control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample ENCFF448ZSO bed narrowPeak conservative idr thresholded peaks ENCSR000BLP ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAX-human ENCAB000AIL DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF335ASE, ENCFF419RSJ, ENCFF619NIZ, ENCFF933FSJ 909409 ENCODE Processing Pipeline 33fcc6e809237c1fb1bc3f66d008880e https://www.encodeproject.org/files/ENCFF448ZSO/@@download/ENCFF448ZSO.bed.gz GRCh38 released control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample ENCFF160BBX bigBed narrowPeak conservative idr thresholded peaks ENCSR000BLP ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAX-human ENCAB000AIL DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF448ZSO 1639098 ENCODE Processing Pipeline e0e3a96e929082a930767ca68a6b1411 https://www.encodeproject.org/files/ENCFF160BBX/@@download/ENCFF160BBX.bigBed GRCh38 released control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample ENCFF900NVQ bed narrowPeak optimal idr thresholded peaks ENCSR000BLP ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAX-human ENCAB000AIL DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF335ASE, ENCFF419RSJ, ENCFF619NIZ, ENCFF933FSJ 999894 ENCODE Processing Pipeline 601ed3798660585b840d49abb2d4cb1c https://www.encodeproject.org/files/ENCFF900NVQ/@@download/ENCFF900NVQ.bed.gz GRCh38 released control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample ENCFF717PDB bigBed narrowPeak optimal idr thresholded peaks ENCSR000BLP ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAX-human ENCAB000AIL DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF900NVQ 1772636 ENCODE Processing Pipeline c1bdc59ce9684cede555512c0952f960 https://www.encodeproject.org/files/ENCFF717PDB/@@download/ENCFF717PDB.bigBed GRCh38 released control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample ENCFF771VDS bigWig signal p-value ENCSR000BLP ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAX-human ENCAB000AIL DNA see document see document False 2011-07-18 ENCODE 1 ENCFF701KUD, ENCFF825FLR 357770019 ENCODE Processing Pipeline fa3deb958c5a5e494ed31d1a1f9b4df5 https://www.encodeproject.org/files/ENCFF771VDS/@@download/ENCFF771VDS.bigWig hg19 released control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample ENCFF954VKC bigWig fold change over control ENCSR000BLP ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAX-human ENCAB000AIL DNA see document see document False 2011-07-18 ENCODE 1 ENCFF701KUD, ENCFF825FLR 196830304 ENCODE Processing Pipeline 7f9f6e5384fbaf68e531378a1365abf2 https://www.encodeproject.org/files/ENCFF954VKC/@@download/ENCFF954VKC.bigWig hg19 released control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample ENCFF968MQM bigWig signal p-value ENCSR000BLP ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAX-human ENCAB000AIL DNA see document see document False 2011-07-18 ENCODE 2 ENCFF112YUX, ENCFF585PFH, ENCFF701KUD 629608306 ENCODE Processing Pipeline 6fed3809317484a12ec50029016c944a https://www.encodeproject.org/files/ENCFF968MQM/@@download/ENCFF968MQM.bigWig hg19 released control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample ENCFF462HMW bigWig signal p-value ENCSR000BLP ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAX-human ENCAB000AIL DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF112YUX, ENCFF585PFH, ENCFF701KUD, ENCFF825FLR 833517970 ENCODE Processing Pipeline 123e73eaef438fac32be310346d87957 https://www.encodeproject.org/files/ENCFF462HMW/@@download/ENCFF462HMW.bigWig hg19 released control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample ENCFF529SKC bigWig fold change over control ENCSR000BLP ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAX-human ENCAB000AIL DNA see document see document False 2011-07-18 ENCODE 2 ENCFF112YUX, ENCFF585PFH, ENCFF701KUD 443956536 ENCODE Processing Pipeline 31033e3409b8b970cb69fdbbf48d7250 https://www.encodeproject.org/files/ENCFF529SKC/@@download/ENCFF529SKC.bigWig hg19 released control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample ENCFF626PTB bigWig fold change over control ENCSR000BLP ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAX-human ENCAB000AIL DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF112YUX, ENCFF585PFH, ENCFF701KUD, ENCFF825FLR 584049188 ENCODE Processing Pipeline a29852c1ccad168dfc080d613cee229c https://www.encodeproject.org/files/ENCFF626PTB/@@download/ENCFF626PTB.bigWig hg19 released control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample ENCFF280XEL bed narrowPeak peaks ENCSR000BLP ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAX-human ENCAB000AIL DNA see document see document False 2011-07-18 ENCODE 1 ENCFF701KUD, ENCFF825FLR 5191119 ENCODE Processing Pipeline e509edea4142432ef5a6bd1bb6fcb50b https://www.encodeproject.org/files/ENCFF280XEL/@@download/ENCFF280XEL.bed.gz hg19 released control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample ENCFF221GAR bed narrowPeak conservative idr thresholded peaks ENCSR000BLP ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAX-human ENCAB000AIL DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF001TDO, ENCFF280XEL, ENCFF609KEQ, ENCFF922CBN 920952 ENCODE Processing Pipeline 868ea20b178e66b35ede2c76a99b2aa0 https://www.encodeproject.org/files/ENCFF221GAR/@@download/ENCFF221GAR.bed.gz hg19 released control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample ENCFF296VTK bigBed narrowPeak peaks ENCSR000BLP ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAX-human ENCAB000AIL DNA see document see document False 2011-07-18 ENCODE 1 ENCFF280XEL 12748053 ENCODE Processing Pipeline 81c7dd99c27573341ee30049cdeb7c4a https://www.encodeproject.org/files/ENCFF296VTK/@@download/ENCFF296VTK.bigBed hg19 released control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample ENCFF259GEV bigBed narrowPeak peaks ENCSR000BLP ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAX-human ENCAB000AIL DNA see document see document False 2011-07-18 ENCODE 2 ENCFF609KEQ 12952945 ENCODE Processing Pipeline a5bb351ac4c6bf85aff5fb226ecbecf7 https://www.encodeproject.org/files/ENCFF259GEV/@@download/ENCFF259GEV.bigBed hg19 released control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample ENCFF222CDN bigBed narrowPeak peaks ENCSR000BLP ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAX-human ENCAB000AIL DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF922CBN 13000549 ENCODE Processing Pipeline 7c081bda27185f05cb388d2b8c6bc5be https://www.encodeproject.org/files/ENCFF222CDN/@@download/ENCFF222CDN.bigBed hg19 released control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample ENCFF609KEQ bed narrowPeak peaks ENCSR000BLP ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAX-human ENCAB000AIL DNA see document see document False 2011-07-18 ENCODE 2 ENCFF112YUX, ENCFF585PFH, ENCFF701KUD 6562166 ENCODE Processing Pipeline c9ecb892a86a5097da79006baf7c5a7a https://www.encodeproject.org/files/ENCFF609KEQ/@@download/ENCFF609KEQ.bed.gz hg19 released control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample ENCFF922CBN bed narrowPeak peaks ENCSR000BLP ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAX-human ENCAB000AIL DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF112YUX, ENCFF585PFH, ENCFF701KUD, ENCFF825FLR 6764862 ENCODE Processing Pipeline a7de17e2d20b0eec93fe9649423df813 https://www.encodeproject.org/files/ENCFF922CBN/@@download/ENCFF922CBN.bed.gz hg19 released control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample ENCFF935WRY bigBed narrowPeak conservative idr thresholded peaks ENCSR000BLP ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAX-human ENCAB000AIL DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF221GAR 1657207 ENCODE Processing Pipeline 27aed69c3f80466d34248bd318647578 https://www.encodeproject.org/files/ENCFF935WRY/@@download/ENCFF935WRY.bigBed hg19 released control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample ENCFF422NGZ bed narrowPeak optimal idr thresholded peaks ENCSR000BLP ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAX-human ENCAB000AIL DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF001TDO, ENCFF280XEL, ENCFF609KEQ, ENCFF922CBN 1024235 ENCODE Processing Pipeline 747de7bd157b52cb8b23dbf18917e54a https://www.encodeproject.org/files/ENCFF422NGZ/@@download/ENCFF422NGZ.bed.gz hg19 released control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample ENCFF524MYI bigBed narrowPeak optimal idr thresholded peaks ENCSR000BLP ChIP-seq EFO:0002067 K562 cell line Homo sapiens MAX-human ENCAB000AIL DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF422NGZ 1807800 ENCODE Processing Pipeline cb0898b0a1cd3f737130bdaeb8b261e0 https://www.encodeproject.org/files/ENCFF524MYI/@@download/ENCFF524MYI.bigBed hg19 released control low read depth, borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample ENCFF053NVZ bam unfiltered alignments ENCSR638QHV ChIP-seq EFO:0002067 K562 cell line Homo sapiens ELF4-human ENCAB606JHO DNA False 2017-01-31 ENCODE 2 100 ENCFF029HOW, ENCFF270PKY, ENCFF807MUK 2795430322 ENCODE Processing Pipeline 282dec872ca549a413f127ce2224af3e https://www.encodeproject.org/files/ENCFF053NVZ/@@download/ENCFF053NVZ.bam hg19 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity ENCFF599VLE bam unfiltered alignments ENCSR638QHV ChIP-seq EFO:0002067 K562 cell line Homo sapiens ELF4-human ENCAB606JHO DNA False 2017-01-31 ENCODE 1 100 ENCFF587AYW, ENCFF625HJX, ENCFF807MUK 4210054617 ENCODE Processing Pipeline 12ecaf39b948a453f9bdbedc80c5443c https://www.encodeproject.org/files/ENCFF599VLE/@@download/ENCFF599VLE.bam hg19 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity ENCFF270PKY fastq reads ENCSR638QHV ChIP-seq EFO:0002067 K562 cell line Homo sapiens ELF4-human ENCAB606JHO DNA False 2017-01-31 ENCODE 2 1 100 paired-ended 1 ENCFF029HOW 1244830342 Michael Snyder, Stanford 3f99a2053ac0de0d11a063250fe0515d SRA:SRR6213389 https://www.encodeproject.org/files/ENCFF270PKY/@@download/ENCFF270PKY.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFD/ released low read depth, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity ENCFF625HJX fastq reads ENCSR638QHV ChIP-seq EFO:0002067 K562 cell line Homo sapiens ELF4-human ENCAB606JHO DNA False 2017-01-31 ENCODE 1 1 100 paired-ended 2 ENCFF587AYW 2026517277 Michael Snyder, Stanford 34e7c845bf08f4aa68fb77d5a2098f2f SRA:SRR6213388 https://www.encodeproject.org/files/ENCFF625HJX/@@download/ENCFF625HJX.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFH/ released low read depth, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity ENCFF587AYW fastq reads ENCSR638QHV ChIP-seq EFO:0002067 K562 cell line Homo sapiens ELF4-human ENCAB606JHO DNA False 2017-01-31 ENCODE 1 1 100 paired-ended 1 ENCFF625HJX 2002230235 Michael Snyder, Stanford 3498c0ab8db07d2da692d83df313aa67 SRA:SRR6213388 https://www.encodeproject.org/files/ENCFF587AYW/@@download/ENCFF587AYW.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFF/ released low read depth, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity ENCFF029HOW fastq reads ENCSR638QHV ChIP-seq EFO:0002067 K562 cell line Homo sapiens ELF4-human ENCAB606JHO DNA False 2017-01-31 ENCODE 2 1 100 paired-ended 2 ENCFF270PKY 1268308602 Michael Snyder, Stanford 14125f57e0673efe92f0d77e88cfbdb3 SRA:SRR6213389 https://www.encodeproject.org/files/ENCFF029HOW/@@download/ENCFF029HOW.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFA/ released low read depth, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity ENCFF606YTH bam alignments ENCSR638QHV ChIP-seq EFO:0002067 K562 cell line Homo sapiens ELF4-human ENCAB606JHO DNA False 2017-01-31 ENCODE 2 100 ENCFF029HOW, ENCFF270PKY, ENCFF807MUK 2297081950 ENCODE Processing Pipeline f3676d69056250ecb5f912f4b89afb69 https://www.encodeproject.org/files/ENCFF606YTH/@@download/ENCFF606YTH.bam hg19 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity ENCFF105XTZ bam alignments ENCSR638QHV ChIP-seq EFO:0002067 K562 cell line Homo sapiens ELF4-human ENCAB606JHO DNA False 2017-01-31 ENCODE 1 100 ENCFF587AYW, ENCFF625HJX, ENCFF807MUK 3088621409 ENCODE Processing Pipeline fa44b66aca18378a29c61b2be22339c1 https://www.encodeproject.org/files/ENCFF105XTZ/@@download/ENCFF105XTZ.bam hg19 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity ENCFF132IPA bigWig signal p-value ENCSR638QHV ChIP-seq EFO:0002067 K562 cell line Homo sapiens ELF4-human ENCAB606JHO DNA False 2017-01-31 ENCODE 1 ENCFF105XTZ, ENCFF581ZJL 997200201 ENCODE Processing Pipeline 93818e1791a9a34b81dad31df882fc17 https://www.encodeproject.org/files/ENCFF132IPA/@@download/ENCFF132IPA.bigWig hg19 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity ENCFF575NPT bigWig signal p-value ENCSR638QHV ChIP-seq EFO:0002067 K562 cell line Homo sapiens ELF4-human ENCAB606JHO DNA False 2017-01-31 ENCODE 2 ENCFF051LWI, ENCFF606YTH 952559059 ENCODE Processing Pipeline 1f5e2810b20e72ca1e680cf32975c9d6 https://www.encodeproject.org/files/ENCFF575NPT/@@download/ENCFF575NPT.bigWig hg19 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity ENCFF991LDI bigWig signal p-value ENCSR638QHV ChIP-seq EFO:0002067 K562 cell line Homo sapiens ELF4-human ENCAB606JHO DNA False 2017-01-31 ENCODE 1, 2 ENCFF051LWI, ENCFF105XTZ, ENCFF581ZJL, ENCFF606YTH 1466910343 ENCODE Processing Pipeline 981227234370e0dbd05ffbc3a8b3a4d7 https://www.encodeproject.org/files/ENCFF991LDI/@@download/ENCFF991LDI.bigWig hg19 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity ENCFF058QVY bigWig fold change over control ENCSR638QHV ChIP-seq EFO:0002067 K562 cell line Homo sapiens ELF4-human ENCAB606JHO DNA False 2017-01-31 ENCODE 1 ENCFF105XTZ, ENCFF581ZJL 1020154338 ENCODE Processing Pipeline b49b84613e81733e117365f09918faae https://www.encodeproject.org/files/ENCFF058QVY/@@download/ENCFF058QVY.bigWig hg19 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity ENCFF393XSM bigWig fold change over control ENCSR638QHV ChIP-seq EFO:0002067 K562 cell line Homo sapiens ELF4-human ENCAB606JHO DNA False 2017-01-31 ENCODE 2 ENCFF051LWI, ENCFF606YTH 819598401 ENCODE Processing Pipeline ea1ae3b4ca5e57ae56400ba646d0379a https://www.encodeproject.org/files/ENCFF393XSM/@@download/ENCFF393XSM.bigWig hg19 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity ENCFF121DYK bigWig fold change over control ENCSR638QHV ChIP-seq EFO:0002067 K562 cell line Homo sapiens ELF4-human ENCAB606JHO DNA False 2017-01-31 ENCODE 1, 2 ENCFF051LWI, ENCFF105XTZ, ENCFF581ZJL, ENCFF606YTH 1792280281 ENCODE Processing Pipeline db7302bba9d2ec991de5dbd4d83ac28e https://www.encodeproject.org/files/ENCFF121DYK/@@download/ENCFF121DYK.bigWig hg19 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity ENCFF625PVR bed narrowPeak peaks ENCSR638QHV ChIP-seq EFO:0002067 K562 cell line Homo sapiens ELF4-human ENCAB606JHO DNA False 2017-01-31 ENCODE 1, 2 ENCFF051LWI, ENCFF105XTZ, ENCFF581ZJL, ENCFF606YTH 7218596 ENCODE Processing Pipeline b7b93a32812f7a3a31bb504b9892b82d https://www.encodeproject.org/files/ENCFF625PVR/@@download/ENCFF625PVR.bed.gz hg19 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity ENCFF236DDU bigBed narrowPeak peaks ENCSR638QHV ChIP-seq EFO:0002067 K562 cell line Homo sapiens ELF4-human ENCAB606JHO DNA False 2017-01-31 ENCODE 2 ENCFF307JUJ 13275144 ENCODE Processing Pipeline 3ad1ee6f9e325408564c814e56147bf6 https://www.encodeproject.org/files/ENCFF236DDU/@@download/ENCFF236DDU.bigBed hg19 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity ENCFF630ZHT bigBed narrowPeak peaks ENCSR638QHV ChIP-seq EFO:0002067 K562 cell line Homo sapiens ELF4-human ENCAB606JHO DNA False 2017-01-31 ENCODE 1 ENCFF734SUP 13312591 ENCODE Processing Pipeline 0e019aa21610b8f4faef864c35fc3852 https://www.encodeproject.org/files/ENCFF630ZHT/@@download/ENCFF630ZHT.bigBed hg19 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity ENCFF307JUJ bed narrowPeak peaks ENCSR638QHV ChIP-seq EFO:0002067 K562 cell line Homo sapiens ELF4-human ENCAB606JHO DNA False 2017-01-31 ENCODE 2 ENCFF051LWI, ENCFF606YTH 6500043 ENCODE Processing Pipeline 5c65bc9a01516d7a56cae72f2baf034a https://www.encodeproject.org/files/ENCFF307JUJ/@@download/ENCFF307JUJ.bed.gz hg19 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity ENCFF734SUP bed narrowPeak peaks ENCSR638QHV ChIP-seq EFO:0002067 K562 cell line Homo sapiens ELF4-human ENCAB606JHO DNA False 2017-01-31 ENCODE 1 ENCFF105XTZ, ENCFF581ZJL 6729307 ENCODE Processing Pipeline 74392f29101d939774a874931fce12b7 https://www.encodeproject.org/files/ENCFF734SUP/@@download/ENCFF734SUP.bed.gz hg19 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity ENCFF897BXO bigBed narrowPeak peaks ENCSR638QHV ChIP-seq EFO:0002067 K562 cell line Homo sapiens ELF4-human ENCAB606JHO DNA False 2017-01-31 ENCODE 1, 2 ENCFF625PVR 13161994 ENCODE Processing Pipeline 958ab50d4c8dfefd790191179d51e442 https://www.encodeproject.org/files/ENCFF897BXO/@@download/ENCFF897BXO.bigBed hg19 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity ENCFF039TGK bam unfiltered alignments ENCSR638QHV ChIP-seq EFO:0002067 K562 cell line Homo sapiens ELF4-human ENCAB606JHO DNA False 2017-01-31 ENCODE 1 100 ENCFF587AYW, ENCFF625HJX, ENCFF643CGH 4211452628 ENCODE Processing Pipeline cf8c7ba68c7dc27b414784650ef55470 https://www.encodeproject.org/files/ENCFF039TGK/@@download/ENCFF039TGK.bam GRCh38 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity ENCFF921IIJ bam unfiltered alignments ENCSR638QHV ChIP-seq EFO:0002067 K562 cell line Homo sapiens ELF4-human ENCAB606JHO DNA False 2017-01-31 ENCODE 2 100 ENCFF029HOW, ENCFF270PKY, ENCFF643CGH 2797308237 ENCODE Processing Pipeline da0282026166a345c2388807bc53cbe7 https://www.encodeproject.org/files/ENCFF921IIJ/@@download/ENCFF921IIJ.bam GRCh38 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity ENCFF958WMW bam alignments ENCSR638QHV ChIP-seq EFO:0002067 K562 cell line Homo sapiens ELF4-human ENCAB606JHO DNA False 2017-01-31 ENCODE 2 100 ENCFF029HOW, ENCFF270PKY, ENCFF643CGH 2298577133 ENCODE Processing Pipeline 9135d003f675408f1f632ee1ed976d5a https://www.encodeproject.org/files/ENCFF958WMW/@@download/ENCFF958WMW.bam GRCh38 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity ENCFF339RWU bam alignments ENCSR638QHV ChIP-seq EFO:0002067 K562 cell line Homo sapiens ELF4-human ENCAB606JHO DNA False 2017-01-31 ENCODE 1 100 ENCFF587AYW, ENCFF625HJX, ENCFF643CGH 3090046520 ENCODE Processing Pipeline 763be60c3e3afa5a031952d4c9e2f101 https://www.encodeproject.org/files/ENCFF339RWU/@@download/ENCFF339RWU.bam GRCh38 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity ENCFF721IUB bigWig signal p-value ENCSR638QHV ChIP-seq EFO:0002067 K562 cell line Homo sapiens ELF4-human ENCAB606JHO DNA False 2017-01-31 ENCODE 1 ENCFF339RWU, ENCFF910IKB 997744443 ENCODE Processing Pipeline 768cc92fb09dde6f87665fb5731ddbb9 https://www.encodeproject.org/files/ENCFF721IUB/@@download/ENCFF721IUB.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity ENCFF569HHT bigWig signal p-value ENCSR638QHV ChIP-seq EFO:0002067 K562 cell line Homo sapiens ELF4-human ENCAB606JHO DNA False 2017-01-31 ENCODE 2 ENCFF227IZS, ENCFF958WMW 947339132 ENCODE Processing Pipeline 8f0feb3ed83528c9c7b3d0b037070ee5 https://www.encodeproject.org/files/ENCFF569HHT/@@download/ENCFF569HHT.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity ENCFF969RRF bigWig signal p-value ENCSR638QHV ChIP-seq EFO:0002067 K562 cell line Homo sapiens ELF4-human ENCAB606JHO DNA False 2017-01-31 ENCODE 1, 2 ENCFF227IZS, ENCFF339RWU, ENCFF910IKB, ENCFF958WMW 1579711541 ENCODE Processing Pipeline 47bba7d94eaa883edf60654d1e6d6d17 https://www.encodeproject.org/files/ENCFF969RRF/@@download/ENCFF969RRF.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity ENCFF779CBB bigWig fold change over control ENCSR638QHV ChIP-seq EFO:0002067 K562 cell line Homo sapiens ELF4-human ENCAB606JHO DNA False 2017-01-31 ENCODE 1 ENCFF339RWU, ENCFF910IKB 1021113136 ENCODE Processing Pipeline cd120cdffca8469e5589f4230803de8d https://www.encodeproject.org/files/ENCFF779CBB/@@download/ENCFF779CBB.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity ENCFF519UPE bigWig fold change over control ENCSR638QHV ChIP-seq EFO:0002067 K562 cell line Homo sapiens ELF4-human ENCAB606JHO DNA False 2017-01-31 ENCODE 2 ENCFF227IZS, ENCFF958WMW 813736932 ENCODE Processing Pipeline e4f452412eb16f0235229fb501dcd610 https://www.encodeproject.org/files/ENCFF519UPE/@@download/ENCFF519UPE.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity ENCFF383OZJ bigWig fold change over control ENCSR638QHV ChIP-seq EFO:0002067 K562 cell line Homo sapiens ELF4-human ENCAB606JHO DNA False 2017-01-31 ENCODE 1, 2 ENCFF227IZS, ENCFF339RWU, ENCFF910IKB, ENCFF958WMW 1805603872 ENCODE Processing Pipeline 4dbceca67d9f694a693f11fbfb2599f5 https://www.encodeproject.org/files/ENCFF383OZJ/@@download/ENCFF383OZJ.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity ENCFF105NCA bed narrowPeak peaks ENCSR638QHV ChIP-seq EFO:0002067 K562 cell line Homo sapiens ELF4-human ENCAB606JHO DNA False 2017-01-31 ENCODE 1 ENCFF339RWU, ENCFF910IKB 6603415 ENCODE Processing Pipeline e5a4dca9eda8d57b923ef6aa6cf65d04 https://www.encodeproject.org/files/ENCFF105NCA/@@download/ENCFF105NCA.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity ENCFF870UGO bed narrowPeak peaks ENCSR638QHV ChIP-seq EFO:0002067 K562 cell line Homo sapiens ELF4-human ENCAB606JHO DNA False 2017-01-31 ENCODE 2 ENCFF227IZS, ENCFF958WMW 6390404 ENCODE Processing Pipeline 6e707f83fe85adc367acc96f8a61b714 https://www.encodeproject.org/files/ENCFF870UGO/@@download/ENCFF870UGO.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity ENCFF114RXP bed narrowPeak peaks ENCSR638QHV ChIP-seq EFO:0002067 K562 cell line Homo sapiens ELF4-human ENCAB606JHO DNA False 2017-01-31 ENCODE 1, 2 ENCFF227IZS, ENCFF339RWU, ENCFF910IKB, ENCFF958WMW 7176379 ENCODE Processing Pipeline 5325987842ebbe8b83818280d47de0bb https://www.encodeproject.org/files/ENCFF114RXP/@@download/ENCFF114RXP.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity ENCFF612DLO bigBed narrowPeak peaks ENCSR638QHV ChIP-seq EFO:0002067 K562 cell line Homo sapiens ELF4-human ENCAB606JHO DNA False 2017-01-31 ENCODE 2 ENCFF870UGO 13281708 ENCODE Processing Pipeline e6242a7c9e0f87652a5ac92bf4232846 https://www.encodeproject.org/files/ENCFF612DLO/@@download/ENCFF612DLO.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity ENCFF021XDU bigBed narrowPeak peaks ENCSR638QHV ChIP-seq EFO:0002067 K562 cell line Homo sapiens ELF4-human ENCAB606JHO DNA False 2017-01-31 ENCODE 1 ENCFF105NCA 13300832 ENCODE Processing Pipeline 68eb9858b3be232d663e34379f589e93 https://www.encodeproject.org/files/ENCFF021XDU/@@download/ENCFF021XDU.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity ENCFF191SVO bigBed narrowPeak peaks ENCSR638QHV ChIP-seq EFO:0002067 K562 cell line Homo sapiens ELF4-human ENCAB606JHO DNA False 2017-01-31 ENCODE 1, 2 ENCFF114RXP 13153664 ENCODE Processing Pipeline c46e078ee1cef760afa5a7af0748a8d7 https://www.encodeproject.org/files/ENCFF191SVO/@@download/ENCFF191SVO.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity ENCFF136UPB bed narrowPeak conservative idr thresholded peaks ENCSR638QHV ChIP-seq EFO:0002067 K562 cell line Homo sapiens ELF4-human ENCAB606JHO DNA False 2017-01-31 ENCODE 1, 2 ENCFF105NCA, ENCFF114RXP, ENCFF419RSJ, ENCFF870UGO 321165 ENCODE Processing Pipeline 1212b8461e51602ead61133dc7f34de9 https://www.encodeproject.org/files/ENCFF136UPB/@@download/ENCFF136UPB.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity ENCFF625YZE bigBed narrowPeak conservative idr thresholded peaks ENCSR638QHV ChIP-seq EFO:0002067 K562 cell line Homo sapiens ELF4-human ENCAB606JHO DNA False 2017-01-31 ENCODE 1, 2 ENCFF136UPB 717066 ENCODE Processing Pipeline b9c9bf33f2b9a8e7ae9499f32d38b46f https://www.encodeproject.org/files/ENCFF625YZE/@@download/ENCFF625YZE.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity ENCFF539SXG bed narrowPeak optimal idr thresholded peaks ENCSR638QHV ChIP-seq EFO:0002067 K562 cell line Homo sapiens ELF4-human ENCAB606JHO DNA False 2017-01-31 ENCODE 1, 2 ENCFF105NCA, ENCFF114RXP, ENCFF419RSJ, ENCFF870UGO 372701 ENCODE Processing Pipeline 40f72df28c276c4dbe859b809f985ff0 https://www.encodeproject.org/files/ENCFF539SXG/@@download/ENCFF539SXG.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity ENCFF377OIN bigBed narrowPeak optimal idr thresholded peaks ENCSR638QHV ChIP-seq EFO:0002067 K562 cell line Homo sapiens ELF4-human ENCAB606JHO DNA False 2017-01-31 ENCODE 1, 2 ENCFF539SXG 800864 ENCODE Processing Pipeline ea8f5b90edd21a176571c54aa6b9f233 https://www.encodeproject.org/files/ENCFF377OIN/@@download/ENCFF377OIN.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity ENCFF976WHF bed narrowPeak conservative idr thresholded peaks ENCSR638QHV ChIP-seq EFO:0002067 K562 cell line Homo sapiens ELF4-human ENCAB606JHO DNA False 2017-01-31 ENCODE 1, 2 ENCFF001TDO, ENCFF307JUJ, ENCFF625PVR, ENCFF734SUP 273845 ENCODE Processing Pipeline af07b6f51bfe9fd037e268547e59f97d https://www.encodeproject.org/files/ENCFF976WHF/@@download/ENCFF976WHF.bed.gz hg19 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity ENCFF315KJE bigBed narrowPeak conservative idr thresholded peaks ENCSR638QHV ChIP-seq EFO:0002067 K562 cell line Homo sapiens ELF4-human ENCAB606JHO DNA False 2017-01-31 ENCODE 1, 2 ENCFF976WHF 514844 ENCODE Processing Pipeline 3d804e776aefeee6be281194e5bacdb6 https://www.encodeproject.org/files/ENCFF315KJE/@@download/ENCFF315KJE.bigBed hg19 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity ENCFF502KHR bed narrowPeak optimal idr thresholded peaks ENCSR638QHV ChIP-seq EFO:0002067 K562 cell line Homo sapiens ELF4-human ENCAB606JHO DNA False 2017-01-31 ENCODE 1, 2 ENCFF001TDO, ENCFF307JUJ, ENCFF625PVR, ENCFF734SUP 329872 ENCODE Processing Pipeline c2e187f6d861df3100e2acf5d12e3e45 https://www.encodeproject.org/files/ENCFF502KHR/@@download/ENCFF502KHR.bed.gz hg19 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity ENCFF705PUY bigBed narrowPeak optimal idr thresholded peaks ENCSR638QHV ChIP-seq EFO:0002067 K562 cell line Homo sapiens ELF4-human ENCAB606JHO DNA False 2017-01-31 ENCODE 1, 2 ENCFF502KHR 583983 ENCODE Processing Pipeline d082b74162382443119b06c8aaca02eb https://www.encodeproject.org/files/ENCFF705PUY/@@download/ENCFF705PUY.bigBed hg19 released low read depth, mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity ENCFF236GZM fastq reads ENCSR893WSB ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC2-human ENCAB152MRN DNA False 2018-01-26 ENCODE 1 1 100 paired-ended 1 ENCFF395GMN 3128379780 Michael Snyder, Stanford bab4b15d0e35a5d965370e599259525a https://www.encodeproject.org/files/ENCFF236GZM/@@download/ENCFF236GZM.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFF/ released borderline replicate concordance experiment not submitted to GEO partially characterized antibody ENCFF395GMN fastq reads ENCSR893WSB ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC2-human ENCAB152MRN DNA False 2018-01-26 ENCODE 1 1 100 paired-ended 2 ENCFF236GZM 3179860864 Michael Snyder, Stanford 7f27a52f2cca03a11bb96ffa0aec1541 https://www.encodeproject.org/files/ENCFF395GMN/@@download/ENCFF395GMN.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFH/ released borderline replicate concordance experiment not submitted to GEO partially characterized antibody ENCFF359AZP fastq reads ENCSR893WSB ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC2-human ENCAB152MRN DNA False 2018-01-26 ENCODE 2 1 100 paired-ended 1 ENCFF361JMR 2904883003 Michael Snyder, Stanford 8f4bcb3eb48d260f1b05a16de3a194db https://www.encodeproject.org/files/ENCFF359AZP/@@download/ENCFF359AZP.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFD/ released borderline replicate concordance experiment not submitted to GEO partially characterized antibody ENCFF361JMR fastq reads ENCSR893WSB ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC2-human ENCAB152MRN DNA False 2018-01-26 ENCODE 2 1 100 paired-ended 2 ENCFF359AZP 2946320871 Michael Snyder, Stanford 9b55867eda6bbf682e0cadba379b2206 https://www.encodeproject.org/files/ENCFF361JMR/@@download/ENCFF361JMR.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFA/ released borderline replicate concordance experiment not submitted to GEO partially characterized antibody ENCFF151TBQ bam unfiltered alignments ENCSR893WSB ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC2-human ENCAB152MRN DNA False 2018-01-26 ENCODE 2 100 ENCFF359AZP, ENCFF361JMR, ENCFF643CGH 6350404201 ENCODE Processing Pipeline 3d393ac001c7e7966f92a84fca8ebe33 https://www.encodeproject.org/files/ENCFF151TBQ/@@download/ENCFF151TBQ.bam GRCh38 released borderline replicate concordance experiment not submitted to GEO partially characterized antibody ENCFF249BJA bam unfiltered alignments ENCSR893WSB ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC2-human ENCAB152MRN DNA False 2018-01-26 ENCODE 1 100 ENCFF236GZM, ENCFF395GMN, ENCFF643CGH 6722195177 ENCODE Processing Pipeline e59c6d77e7d4fda517006175c28bad1a https://www.encodeproject.org/files/ENCFF249BJA/@@download/ENCFF249BJA.bam GRCh38 released borderline replicate concordance experiment not submitted to GEO partially characterized antibody ENCFF346DYT bam alignments ENCSR893WSB ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC2-human ENCAB152MRN DNA False 2018-01-26 ENCODE 1 100 ENCFF236GZM, ENCFF395GMN, ENCFF643CGH 5355982268 ENCODE Processing Pipeline 1ba03b23e1a5ad29b476b0e65bc107ed https://www.encodeproject.org/files/ENCFF346DYT/@@download/ENCFF346DYT.bam GRCh38 released borderline replicate concordance experiment not submitted to GEO partially characterized antibody ENCFF731EKP bam alignments ENCSR893WSB ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC2-human ENCAB152MRN DNA False 2018-01-26 ENCODE 2 100 ENCFF359AZP, ENCFF361JMR, ENCFF643CGH 5032479600 ENCODE Processing Pipeline b594f7b0e8b0f4da9989d60e2dfd1ef6 https://www.encodeproject.org/files/ENCFF731EKP/@@download/ENCFF731EKP.bam GRCh38 released borderline replicate concordance experiment not submitted to GEO partially characterized antibody ENCFF534ZQZ bigWig signal p-value ENCSR893WSB ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC2-human ENCAB152MRN DNA False 2018-01-26 ENCODE 1 ENCFF346DYT, ENCFF910IKB 1128079757 ENCODE Processing Pipeline 9b96f3c41c28f81d32ad08db0edb1b03 https://www.encodeproject.org/files/ENCFF534ZQZ/@@download/ENCFF534ZQZ.bigWig GRCh38 released borderline replicate concordance experiment not submitted to GEO partially characterized antibody ENCFF942MYK bigWig signal p-value ENCSR893WSB ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC2-human ENCAB152MRN DNA False 2018-01-26 ENCODE 2 ENCFF227IZS, ENCFF731EKP 1236890298 ENCODE Processing Pipeline 616934b884bee4fdef4d0e471d3671b6 https://www.encodeproject.org/files/ENCFF942MYK/@@download/ENCFF942MYK.bigWig GRCh38 released borderline replicate concordance experiment not submitted to GEO partially characterized antibody ENCFF523LUR bed narrowPeak peaks ENCSR893WSB ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC2-human ENCAB152MRN DNA False 2018-01-26 ENCODE 2 ENCFF227IZS, ENCFF731EKP 6795373 ENCODE Processing Pipeline 97c2c1ec653b66d77a142de7e63819b2 https://www.encodeproject.org/files/ENCFF523LUR/@@download/ENCFF523LUR.bed.gz GRCh38 released borderline replicate concordance experiment not submitted to GEO partially characterized antibody ENCFF861TVL bigBed narrowPeak conservative idr thresholded peaks ENCSR893WSB ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC2-human ENCAB152MRN DNA False 2018-01-26 ENCODE 1, 2 ENCFF286DHJ 922096 ENCODE Processing Pipeline b8715c3b8e94c47a84a6f4e03bf06ea6 https://www.encodeproject.org/files/ENCFF861TVL/@@download/ENCFF861TVL.bigBed GRCh38 released borderline replicate concordance experiment not submitted to GEO partially characterized antibody ENCFF053BQG bed narrowPeak peaks ENCSR893WSB ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC2-human ENCAB152MRN DNA False 2018-01-26 ENCODE 1 ENCFF346DYT, ENCFF910IKB 6971939 ENCODE Processing Pipeline 7c2d203dbab5d94b33caec983244b5bb https://www.encodeproject.org/files/ENCFF053BQG/@@download/ENCFF053BQG.bed.gz GRCh38 released borderline replicate concordance experiment not submitted to GEO partially characterized antibody ENCFF581NLW bigWig fold change over control ENCSR893WSB ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC2-human ENCAB152MRN DNA False 2018-01-26 ENCODE 1 ENCFF346DYT, ENCFF910IKB 1259920211 ENCODE Processing Pipeline c5d64b428daa70e4fdde995f5f8f487c https://www.encodeproject.org/files/ENCFF581NLW/@@download/ENCFF581NLW.bigWig GRCh38 released borderline replicate concordance experiment not submitted to GEO partially characterized antibody ENCFF689LWD bigWig fold change over control ENCSR893WSB ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC2-human ENCAB152MRN DNA False 2018-01-26 ENCODE 1, 2 ENCFF227IZS, ENCFF346DYT, ENCFF731EKP, ENCFF910IKB 2203545375 ENCODE Processing Pipeline 33f1d9a9f9113cd42d4ab6795b64b74f https://www.encodeproject.org/files/ENCFF689LWD/@@download/ENCFF689LWD.bigWig GRCh38 released borderline replicate concordance experiment not submitted to GEO partially characterized antibody ENCFF523NBR bigBed narrowPeak peaks ENCSR893WSB ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC2-human ENCAB152MRN DNA False 2018-01-26 ENCODE 2 ENCFF523LUR 13203545 ENCODE Processing Pipeline 13544e983d2e434a7d45d6aaad94ad85 https://www.encodeproject.org/files/ENCFF523NBR/@@download/ENCFF523NBR.bigBed GRCh38 released borderline replicate concordance experiment not submitted to GEO partially characterized antibody ENCFF321AYZ bigWig signal p-value ENCSR893WSB ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC2-human ENCAB152MRN DNA False 2018-01-26 ENCODE 1, 2 ENCFF227IZS, ENCFF346DYT, ENCFF731EKP, ENCFF910IKB 1785860026 ENCODE Processing Pipeline 6ee05652cf6b377de10bec3574777c80 https://www.encodeproject.org/files/ENCFF321AYZ/@@download/ENCFF321AYZ.bigWig GRCh38 released borderline replicate concordance experiment not submitted to GEO partially characterized antibody ENCFF519RWJ bed narrowPeak optimal idr thresholded peaks ENCSR893WSB ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC2-human ENCAB152MRN DNA False 2018-01-26 ENCODE 1, 2 ENCFF053BQG, ENCFF419RSJ, ENCFF523LUR, ENCFF729RFA 714356 ENCODE Processing Pipeline ce3ad1a0d42079a4eecba3f7e22fd380 https://www.encodeproject.org/files/ENCFF519RWJ/@@download/ENCFF519RWJ.bed.gz GRCh38 released borderline replicate concordance experiment not submitted to GEO partially characterized antibody ENCFF827VZB bigWig fold change over control ENCSR893WSB ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC2-human ENCAB152MRN DNA False 2018-01-26 ENCODE 2 ENCFF227IZS, ENCFF731EKP 1198335946 ENCODE Processing Pipeline 74d8cac139e2d18ad4d6643b5aa46b9d https://www.encodeproject.org/files/ENCFF827VZB/@@download/ENCFF827VZB.bigWig GRCh38 released borderline replicate concordance experiment not submitted to GEO partially characterized antibody ENCFF729RFA bed narrowPeak peaks ENCSR893WSB ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC2-human ENCAB152MRN DNA False 2018-01-26 ENCODE 1, 2 ENCFF227IZS, ENCFF346DYT, ENCFF731EKP, ENCFF910IKB 7210661 ENCODE Processing Pipeline 541d5dcd1fe7a168345344655f75af6e https://www.encodeproject.org/files/ENCFF729RFA/@@download/ENCFF729RFA.bed.gz GRCh38 released borderline replicate concordance experiment not submitted to GEO partially characterized antibody ENCFF942RDO bigBed narrowPeak peaks ENCSR893WSB ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC2-human ENCAB152MRN DNA False 2018-01-26 ENCODE 1 ENCFF053BQG 12758830 ENCODE Processing Pipeline f4ab5d6dabd5407fb4204e759a5fa9ce https://www.encodeproject.org/files/ENCFF942RDO/@@download/ENCFF942RDO.bigBed GRCh38 released borderline replicate concordance experiment not submitted to GEO partially characterized antibody ENCFF903BSG bigBed narrowPeak peaks ENCSR893WSB ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC2-human ENCAB152MRN DNA False 2018-01-26 ENCODE 1, 2 ENCFF729RFA 12921926 ENCODE Processing Pipeline 8dd85cfde1e4044f1a113739e35cfc11 https://www.encodeproject.org/files/ENCFF903BSG/@@download/ENCFF903BSG.bigBed GRCh38 released borderline replicate concordance experiment not submitted to GEO partially characterized antibody ENCFF286DHJ bed narrowPeak conservative idr thresholded peaks ENCSR893WSB ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC2-human ENCAB152MRN DNA False 2018-01-26 ENCODE 1, 2 ENCFF053BQG, ENCFF419RSJ, ENCFF523LUR, ENCFF729RFA 442188 ENCODE Processing Pipeline 209cbc2f976d0d280ea772b28053ddd5 https://www.encodeproject.org/files/ENCFF286DHJ/@@download/ENCFF286DHJ.bed.gz GRCh38 released borderline replicate concordance experiment not submitted to GEO partially characterized antibody ENCFF272WTW bigBed narrowPeak optimal idr thresholded peaks ENCSR893WSB ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC2-human ENCAB152MRN DNA False 2018-01-26 ENCODE 1, 2 ENCFF519RWJ 1329297 ENCODE Processing Pipeline 3c7fab1b009054fa0d8dec67f03e8d5b https://www.encodeproject.org/files/ENCFF272WTW/@@download/ENCFF272WTW.bigBed GRCh38 released borderline replicate concordance experiment not submitted to GEO partially characterized antibody ENCFF811PSW bam unfiltered alignments ENCSR893WSB ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC2-human ENCAB152MRN DNA False 2018-01-26 ENCODE 2 100 ENCFF359AZP, ENCFF361JMR, ENCFF807MUK 6343728610 ENCODE Processing Pipeline 442dccd6b30716d4f3d21efd3f23a107 https://www.encodeproject.org/files/ENCFF811PSW/@@download/ENCFF811PSW.bam hg19 released borderline replicate concordance experiment not submitted to GEO partially characterized antibody ENCFF326JFY bam unfiltered alignments ENCSR893WSB ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC2-human ENCAB152MRN DNA False 2018-01-26 ENCODE 1 100 ENCFF236GZM, ENCFF395GMN, ENCFF807MUK 6717437228 ENCODE Processing Pipeline 7e6ff0f624993d157166518c64aa7296 https://www.encodeproject.org/files/ENCFF326JFY/@@download/ENCFF326JFY.bam hg19 released borderline replicate concordance experiment not submitted to GEO partially characterized antibody ENCFF304WKT bam alignments ENCSR893WSB ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC2-human ENCAB152MRN DNA False 2018-01-26 ENCODE 1 100 ENCFF236GZM, ENCFF395GMN, ENCFF807MUK 5352413850 ENCODE Processing Pipeline 421185c5ba34dbdf876f2ea11f91ff1a https://www.encodeproject.org/files/ENCFF304WKT/@@download/ENCFF304WKT.bam hg19 released borderline replicate concordance experiment not submitted to GEO partially characterized antibody ENCFF333FLO bam alignments ENCSR893WSB ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC2-human ENCAB152MRN DNA False 2018-01-26 ENCODE 2 100 ENCFF359AZP, ENCFF361JMR, ENCFF807MUK 5028659762 ENCODE Processing Pipeline 0144fdc6339c1b536edc8565cbde51c9 https://www.encodeproject.org/files/ENCFF333FLO/@@download/ENCFF333FLO.bam hg19 released borderline replicate concordance experiment not submitted to GEO partially characterized antibody ENCFF810FPN bigWig signal p-value ENCSR893WSB ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC2-human ENCAB152MRN DNA False 2018-01-26 ENCODE 2 ENCFF051LWI, ENCFF333FLO 1092984181 ENCODE Processing Pipeline efe401b804088a6ec73aa2adfbeacc22 https://www.encodeproject.org/files/ENCFF810FPN/@@download/ENCFF810FPN.bigWig hg19 released borderline replicate concordance experiment not submitted to GEO partially characterized antibody ENCFF439QSG bigBed narrowPeak peaks ENCSR893WSB ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC2-human ENCAB152MRN DNA False 2018-01-26 ENCODE 2 ENCFF380RMA 13184827 ENCODE Processing Pipeline 956f1aa5f9413ddcd9db1c814edddf7f https://www.encodeproject.org/files/ENCFF439QSG/@@download/ENCFF439QSG.bigBed hg19 released borderline replicate concordance experiment not submitted to GEO partially characterized antibody ENCFF071NFY bigBed narrowPeak peaks ENCSR893WSB ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC2-human ENCAB152MRN DNA False 2018-01-26 ENCODE 1, 2 ENCFF368EUJ 12847737 ENCODE Processing Pipeline 9e7895f097ed220032b1094893514514 https://www.encodeproject.org/files/ENCFF071NFY/@@download/ENCFF071NFY.bigBed hg19 released borderline replicate concordance experiment not submitted to GEO partially characterized antibody ENCFF640FTG bigWig signal p-value ENCSR893WSB ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC2-human ENCAB152MRN DNA False 2018-01-26 ENCODE 1 ENCFF304WKT, ENCFF581ZJL 1276828895 ENCODE Processing Pipeline 1a07dd28dcc2c9255d966435adc73584 https://www.encodeproject.org/files/ENCFF640FTG/@@download/ENCFF640FTG.bigWig hg19 released borderline replicate concordance experiment not submitted to GEO partially characterized antibody ENCFF595TOQ bigWig fold change over control ENCSR893WSB ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC2-human ENCAB152MRN DNA False 2018-01-26 ENCODE 2 ENCFF051LWI, ENCFF333FLO 1211307798 ENCODE Processing Pipeline 7bec5b0571cd313dd1a74f873ff6d1b8 https://www.encodeproject.org/files/ENCFF595TOQ/@@download/ENCFF595TOQ.bigWig hg19 released borderline replicate concordance experiment not submitted to GEO partially characterized antibody ENCFF843MKD bigBed narrowPeak peaks ENCSR893WSB ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC2-human ENCAB152MRN DNA False 2018-01-26 ENCODE 1 ENCFF399PWD 12913475 ENCODE Processing Pipeline 192d572825e8979e5cdf156891b835bf https://www.encodeproject.org/files/ENCFF843MKD/@@download/ENCFF843MKD.bigBed hg19 released borderline replicate concordance experiment not submitted to GEO partially characterized antibody ENCFF458TCO bed narrowPeak conservative idr thresholded peaks ENCSR893WSB ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC2-human ENCAB152MRN DNA False 2018-01-26 ENCODE 1, 2 ENCFF001TDO, ENCFF368EUJ, ENCFF380RMA, ENCFF399PWD 429870 ENCODE Processing Pipeline 7a37f1d95b64151dafe224c17bbcb87b https://www.encodeproject.org/files/ENCFF458TCO/@@download/ENCFF458TCO.bed.gz hg19 released borderline replicate concordance experiment not submitted to GEO partially characterized antibody ENCFF431CAX bigWig signal p-value ENCSR893WSB ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC2-human ENCAB152MRN DNA False 2018-01-26 ENCODE 1, 2 ENCFF051LWI, ENCFF304WKT, ENCFF333FLO, ENCFF581ZJL 2050977658 ENCODE Processing Pipeline 3c22b6e4c3af9aa3adaaefd113b5bb9a https://www.encodeproject.org/files/ENCFF431CAX/@@download/ENCFF431CAX.bigWig hg19 released borderline replicate concordance experiment not submitted to GEO partially characterized antibody ENCFF990HCZ bigWig fold change over control ENCSR893WSB ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC2-human ENCAB152MRN DNA False 2018-01-26 ENCODE 1 ENCFF304WKT, ENCFF581ZJL 1257730630 ENCODE Processing Pipeline 463ef30c02a7bf6fdafdc1ff19ff0a01 https://www.encodeproject.org/files/ENCFF990HCZ/@@download/ENCFF990HCZ.bigWig hg19 released borderline replicate concordance experiment not submitted to GEO partially characterized antibody ENCFF915GWT bigWig fold change over control ENCSR893WSB ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC2-human ENCAB152MRN DNA False 2018-01-26 ENCODE 1, 2 ENCFF051LWI, ENCFF304WKT, ENCFF333FLO, ENCFF581ZJL 2187857282 ENCODE Processing Pipeline 75e14961fce68d5911d6682823ba94f6 https://www.encodeproject.org/files/ENCFF915GWT/@@download/ENCFF915GWT.bigWig hg19 released borderline replicate concordance experiment not submitted to GEO partially characterized antibody ENCFF399PWD bed narrowPeak peaks ENCSR893WSB ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC2-human ENCAB152MRN DNA False 2018-01-26 ENCODE 1 ENCFF304WKT, ENCFF581ZJL 7116658 ENCODE Processing Pipeline 45aaf01c6c66e2a1da2dd08eeffe4503 https://www.encodeproject.org/files/ENCFF399PWD/@@download/ENCFF399PWD.bed.gz hg19 released borderline replicate concordance experiment not submitted to GEO partially characterized antibody ENCFF380RMA bed narrowPeak peaks ENCSR893WSB ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC2-human ENCAB152MRN DNA False 2018-01-26 ENCODE 2 ENCFF051LWI, ENCFF333FLO 6789390 ENCODE Processing Pipeline 3e88a974bac6cd6198dc1f3be445c88e https://www.encodeproject.org/files/ENCFF380RMA/@@download/ENCFF380RMA.bed.gz hg19 released borderline replicate concordance experiment not submitted to GEO partially characterized antibody ENCFF368EUJ bed narrowPeak peaks ENCSR893WSB ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC2-human ENCAB152MRN DNA False 2018-01-26 ENCODE 1, 2 ENCFF051LWI, ENCFF304WKT, ENCFF333FLO, ENCFF581ZJL 7156152 ENCODE Processing Pipeline 66854d22b7924ae9074a67f725ad97a1 https://www.encodeproject.org/files/ENCFF368EUJ/@@download/ENCFF368EUJ.bed.gz hg19 released borderline replicate concordance experiment not submitted to GEO partially characterized antibody ENCFF473DOH bigBed narrowPeak conservative idr thresholded peaks ENCSR893WSB ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC2-human ENCAB152MRN DNA False 2018-01-26 ENCODE 1, 2 ENCFF458TCO 901780 ENCODE Processing Pipeline ce13c3c3d7e22db0e29c9a2ea5379987 https://www.encodeproject.org/files/ENCFF473DOH/@@download/ENCFF473DOH.bigBed hg19 released borderline replicate concordance experiment not submitted to GEO partially characterized antibody ENCFF490VVG bed narrowPeak optimal idr thresholded peaks ENCSR893WSB ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC2-human ENCAB152MRN DNA False 2018-01-26 ENCODE 1, 2 ENCFF001TDO, ENCFF368EUJ, ENCFF380RMA, ENCFF399PWD 687231 ENCODE Processing Pipeline fca556d6c89db48dae7c6c046425eeb5 https://www.encodeproject.org/files/ENCFF490VVG/@@download/ENCFF490VVG.bed.gz hg19 released borderline replicate concordance experiment not submitted to GEO partially characterized antibody ENCFF202VDA bigBed narrowPeak optimal idr thresholded peaks ENCSR893WSB ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC2-human ENCAB152MRN DNA False 2018-01-26 ENCODE 1, 2 ENCFF490VVG 1290493 ENCODE Processing Pipeline 164a7be19a188c14aff53e9849e6e632 https://www.encodeproject.org/files/ENCFF202VDA/@@download/ENCFF202VDA.bigBed hg19 released borderline replicate concordance experiment not submitted to GEO partially characterized antibody ENCFF267RJS bam unfiltered alignments ENCSR620VIC ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CEBPG-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 50 ENCFF271TCS, ENCFF508KFG, ENCFF807MUK 1624587393 ENCODE Processing Pipeline d53077c99b1a8b74d8a7997458ffff97 https://www.encodeproject.org/files/ENCFF267RJS/@@download/ENCFF267RJS.bam hg19 released borderline replicate concordance, missing genetic modification characterization ENCFF501LMC bam unfiltered alignments ENCSR620VIC ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CEBPG-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 50 ENCFF179MKT, ENCFF282ZHS, ENCFF807MUK 2033180679 ENCODE Processing Pipeline cc1b1cec2da5e4332d74b77cbca23a61 https://www.encodeproject.org/files/ENCFF501LMC/@@download/ENCFF501LMC.bam hg19 released borderline replicate concordance, missing genetic modification characterization ENCFF282ZHS fastq reads ENCSR620VIC ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CEBPG-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 1 50 single-ended 700156301 Kevin White, UChicago 2d3b0be9b8e54aadfe8d9ae096fc9f47 SRA:SRR6213248 https://www.encodeproject.org/files/ENCFF282ZHS/@@download/ENCFF282ZHS.fastq.gz Illumina HiSeq 2000 /files/ENCFF348XCG/, /files/ENCFF726JBF/ released borderline replicate concordance, missing genetic modification characterization ENCFF508KFG fastq reads ENCSR620VIC ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CEBPG-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 1 50 single-ended 562367446 Kevin White, UChicago 93d93f74f6a3e43df137dde0c5a35afe SRA:SRR6213246 https://www.encodeproject.org/files/ENCFF508KFG/@@download/ENCFF508KFG.fastq.gz Illumina HiSeq 2000 /files/ENCFF348XCG/, /files/ENCFF726JBF/ released borderline replicate concordance, missing genetic modification characterization ENCFF179MKT fastq reads ENCSR620VIC ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CEBPG-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 1 50 single-ended 1245376689 Kevin White, UChicago f3fea2d28086d64125aa966d4fbe9149 SRA:SRR6213249 https://www.encodeproject.org/files/ENCFF179MKT/@@download/ENCFF179MKT.fastq.gz Illumina HiSeq 2000 /files/ENCFF348XCG/, /files/ENCFF726JBF/ released borderline replicate concordance, missing genetic modification characterization ENCFF271TCS fastq reads ENCSR620VIC ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CEBPG-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 1 50 single-ended 946605878 Kevin White, UChicago d84df6f2dbb619d7df318de595baac87 SRA:SRR6213247 https://www.encodeproject.org/files/ENCFF271TCS/@@download/ENCFF271TCS.fastq.gz Illumina HiSeq 2500 /files/ENCFF348XCG/, /files/ENCFF726JBF/ released borderline replicate concordance, missing genetic modification characterization ENCFF310DOA bam alignments ENCSR620VIC ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CEBPG-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 50 ENCFF271TCS, ENCFF508KFG, ENCFF807MUK 1293363302 ENCODE Processing Pipeline 789fbe558dda760f55d27b0b36698bd8 https://www.encodeproject.org/files/ENCFF310DOA/@@download/ENCFF310DOA.bam hg19 released borderline replicate concordance, missing genetic modification characterization ENCFF303OOS bam alignments ENCSR620VIC ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CEBPG-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 50 ENCFF179MKT, ENCFF282ZHS, ENCFF807MUK 1578533844 ENCODE Processing Pipeline 5cf8edcaec83e858369417128bb83c90 https://www.encodeproject.org/files/ENCFF303OOS/@@download/ENCFF303OOS.bam hg19 released borderline replicate concordance, missing genetic modification characterization ENCFF130NOS bigWig signal p-value ENCSR620VIC ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CEBPG-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF075EEP, ENCFF303OOS 790362486 ENCODE Processing Pipeline 0bd107da44f18d175dc25e5b6c056023 https://www.encodeproject.org/files/ENCFF130NOS/@@download/ENCFF130NOS.bigWig hg19 released borderline replicate concordance, missing genetic modification characterization ENCFF718RQL bigWig signal p-value ENCSR620VIC ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CEBPG-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF075EEP, ENCFF303OOS, ENCFF310DOA 1015638933 ENCODE Processing Pipeline 37609f5f4276874cea14c14ee78741b4 https://www.encodeproject.org/files/ENCFF718RQL/@@download/ENCFF718RQL.bigWig hg19 released borderline replicate concordance, missing genetic modification characterization ENCFF485VOQ bigWig signal p-value ENCSR620VIC ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CEBPG-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF075EEP, ENCFF310DOA 660083118 ENCODE Processing Pipeline 1e1f7db38447c6322b5aeeaab0878ff6 https://www.encodeproject.org/files/ENCFF485VOQ/@@download/ENCFF485VOQ.bigWig hg19 released borderline replicate concordance, missing genetic modification characterization ENCFF540UPZ bigWig fold change over control ENCSR620VIC ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CEBPG-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF075EEP, ENCFF310DOA 781608491 ENCODE Processing Pipeline 7dbf7ea8118491bfcb4aeb8f73eec5ba https://www.encodeproject.org/files/ENCFF540UPZ/@@download/ENCFF540UPZ.bigWig hg19 released borderline replicate concordance, missing genetic modification characterization ENCFF579FZB bigWig fold change over control ENCSR620VIC ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CEBPG-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF075EEP, ENCFF303OOS 894489620 ENCODE Processing Pipeline 6dfc185bb494e0f1347979455238c8a4 https://www.encodeproject.org/files/ENCFF579FZB/@@download/ENCFF579FZB.bigWig hg19 released borderline replicate concordance, missing genetic modification characterization ENCFF481CQW bigWig fold change over control ENCSR620VIC ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CEBPG-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF075EEP, ENCFF303OOS, ENCFF310DOA 1230595444 ENCODE Processing Pipeline c10d79ace66555363342a213216a07f5 https://www.encodeproject.org/files/ENCFF481CQW/@@download/ENCFF481CQW.bigWig hg19 released borderline replicate concordance, missing genetic modification characterization ENCFF014ZNK bed narrowPeak peaks ENCSR620VIC ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CEBPG-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF075EEP, ENCFF303OOS 7084035 ENCODE Processing Pipeline 77ff4cb4f03880759fbea7159b5e1b9e https://www.encodeproject.org/files/ENCFF014ZNK/@@download/ENCFF014ZNK.bed.gz hg19 released borderline replicate concordance, missing genetic modification characterization ENCFF529YHQ bigBed narrowPeak peaks ENCSR620VIC ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CEBPG-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF593QEG 13272137 ENCODE Processing Pipeline 4a310eaee3859ba23139cba3cf4c0a39 https://www.encodeproject.org/files/ENCFF529YHQ/@@download/ENCFF529YHQ.bigBed hg19 released borderline replicate concordance, missing genetic modification characterization ENCFF593QEG bed narrowPeak peaks ENCSR620VIC ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CEBPG-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF075EEP, ENCFF303OOS, ENCFF310DOA 7216986 ENCODE Processing Pipeline 30b794e5afc03ed3440259a87f0dd797 https://www.encodeproject.org/files/ENCFF593QEG/@@download/ENCFF593QEG.bed.gz hg19 released borderline replicate concordance, missing genetic modification characterization ENCFF851RZA bed narrowPeak peaks ENCSR620VIC ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CEBPG-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF075EEP, ENCFF310DOA 6682206 ENCODE Processing Pipeline 714549be6e829c4e2ec9fc57bfc6d884 https://www.encodeproject.org/files/ENCFF851RZA/@@download/ENCFF851RZA.bed.gz hg19 released borderline replicate concordance, missing genetic modification characterization ENCFF054WHU bigBed narrowPeak peaks ENCSR620VIC ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CEBPG-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF851RZA 13468261 ENCODE Processing Pipeline 762295da7e460eabe48f610741c333b6 https://www.encodeproject.org/files/ENCFF054WHU/@@download/ENCFF054WHU.bigBed hg19 released borderline replicate concordance, missing genetic modification characterization ENCFF969EHC bigBed narrowPeak peaks ENCSR620VIC ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CEBPG-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF014ZNK 13174769 ENCODE Processing Pipeline 9a292bd8c3431490f4d10919c5ec8e16 https://www.encodeproject.org/files/ENCFF969EHC/@@download/ENCFF969EHC.bigBed hg19 released borderline replicate concordance, missing genetic modification characterization ENCFF666YZZ bam unfiltered alignments ENCSR620VIC ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CEBPG-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 50 ENCFF271TCS, ENCFF508KFG, ENCFF643CGH 1629772583 ENCODE Processing Pipeline bc8b901cd4a39610f6290d0b6f995817 https://www.encodeproject.org/files/ENCFF666YZZ/@@download/ENCFF666YZZ.bam GRCh38 released borderline replicate concordance, missing genetic modification characterization ENCFF855HYM bam unfiltered alignments ENCSR620VIC ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CEBPG-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 50 ENCFF179MKT, ENCFF282ZHS, ENCFF643CGH 2038588687 ENCODE Processing Pipeline f49a03639a9153e2d4607cae79b24ae6 https://www.encodeproject.org/files/ENCFF855HYM/@@download/ENCFF855HYM.bam GRCh38 released borderline replicate concordance, missing genetic modification characterization ENCFF693JVP bam alignments ENCSR620VIC ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CEBPG-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 50 ENCFF271TCS, ENCFF508KFG, ENCFF643CGH 1292681710 ENCODE Processing Pipeline 3e7afc416ecf184abc9225e08f265068 https://www.encodeproject.org/files/ENCFF693JVP/@@download/ENCFF693JVP.bam GRCh38 released borderline replicate concordance, missing genetic modification characterization ENCFF620VNP bam alignments ENCSR620VIC ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CEBPG-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 50 ENCFF179MKT, ENCFF282ZHS, ENCFF643CGH 1577752157 ENCODE Processing Pipeline d419d5d8c1b5d76af4be1e87a0998402 https://www.encodeproject.org/files/ENCFF620VNP/@@download/ENCFF620VNP.bam GRCh38 released borderline replicate concordance, missing genetic modification characterization ENCFF917OJQ bigWig signal p-value ENCSR620VIC ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CEBPG-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF037PYE, ENCFF693JVP 722277906 ENCODE Processing Pipeline 11051c5ee97617a8beaeb395f9daffb2 https://www.encodeproject.org/files/ENCFF917OJQ/@@download/ENCFF917OJQ.bigWig GRCh38 released borderline replicate concordance, missing genetic modification characterization ENCFF040VTF bigWig signal p-value ENCSR620VIC ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CEBPG-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF037PYE, ENCFF620VNP 885979844 ENCODE Processing Pipeline a665e64d3d320da590d88ed0ce07cbe1 https://www.encodeproject.org/files/ENCFF040VTF/@@download/ENCFF040VTF.bigWig GRCh38 released borderline replicate concordance, missing genetic modification characterization ENCFF211FHL bigWig signal p-value ENCSR620VIC ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CEBPG-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF037PYE, ENCFF620VNP, ENCFF693JVP 1017950442 ENCODE Processing Pipeline 310c2120dadcb6d91767dff49f99b6c9 https://www.encodeproject.org/files/ENCFF211FHL/@@download/ENCFF211FHL.bigWig GRCh38 released borderline replicate concordance, missing genetic modification characterization ENCFF995REM bigWig fold change over control ENCSR620VIC ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CEBPG-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF037PYE, ENCFF693JVP 787820257 ENCODE Processing Pipeline 3fb7bf51f2f66e12d9b5edb6913db79f https://www.encodeproject.org/files/ENCFF995REM/@@download/ENCFF995REM.bigWig GRCh38 released borderline replicate concordance, missing genetic modification characterization ENCFF321UQL bigWig fold change over control ENCSR620VIC ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CEBPG-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF037PYE, ENCFF620VNP 900793916 ENCODE Processing Pipeline cd2609ae33bc09bb3561f3ea94b66ca6 https://www.encodeproject.org/files/ENCFF321UQL/@@download/ENCFF321UQL.bigWig GRCh38 released borderline replicate concordance, missing genetic modification characterization ENCFF641ZDT bigWig fold change over control ENCSR620VIC ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CEBPG-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF037PYE, ENCFF620VNP, ENCFF693JVP 1238785346 ENCODE Processing Pipeline e913dc68c6d89ae5325ea2fedb8372c5 https://www.encodeproject.org/files/ENCFF641ZDT/@@download/ENCFF641ZDT.bigWig GRCh38 released borderline replicate concordance, missing genetic modification characterization ENCFF496GPP bed narrowPeak peaks ENCSR620VIC ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CEBPG-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF037PYE, ENCFF620VNP 7001524 ENCODE Processing Pipeline 75460f6418e777a081ba03bd9aeeab01 https://www.encodeproject.org/files/ENCFF496GPP/@@download/ENCFF496GPP.bed.gz GRCh38 released borderline replicate concordance, missing genetic modification characterization ENCFF391ZOJ bed narrowPeak peaks ENCSR620VIC ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CEBPG-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF037PYE, ENCFF693JVP 6555962 ENCODE Processing Pipeline f34ab2222d52cd34f97ff8050a2726f2 https://www.encodeproject.org/files/ENCFF391ZOJ/@@download/ENCFF391ZOJ.bed.gz GRCh38 released borderline replicate concordance, missing genetic modification characterization ENCFF557UGI bigBed narrowPeak peaks ENCSR620VIC ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CEBPG-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF496GPP 13178815 ENCODE Processing Pipeline bac7ca16145688ae4b516514a645175f https://www.encodeproject.org/files/ENCFF557UGI/@@download/ENCFF557UGI.bigBed GRCh38 released borderline replicate concordance, missing genetic modification characterization ENCFF305IJQ bed narrowPeak peaks ENCSR620VIC ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CEBPG-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF037PYE, ENCFF620VNP, ENCFF693JVP 7179390 ENCODE Processing Pipeline 84059ef020836f096443c1877b5c85a2 https://www.encodeproject.org/files/ENCFF305IJQ/@@download/ENCFF305IJQ.bed.gz GRCh38 released borderline replicate concordance, missing genetic modification characterization ENCFF175EUH bigBed narrowPeak peaks ENCSR620VIC ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CEBPG-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF391ZOJ 13469249 ENCODE Processing Pipeline 778e7c776fa025d9e09a2604f551845c https://www.encodeproject.org/files/ENCFF175EUH/@@download/ENCFF175EUH.bigBed GRCh38 released borderline replicate concordance, missing genetic modification characterization ENCFF539NRY bigBed narrowPeak peaks ENCSR620VIC ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CEBPG-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF305IJQ 13281882 ENCODE Processing Pipeline 1d18d11d67fd6515b64cfc6152fa0fde https://www.encodeproject.org/files/ENCFF539NRY/@@download/ENCFF539NRY.bigBed GRCh38 released borderline replicate concordance, missing genetic modification characterization ENCFF086CSF bed narrowPeak optimal idr thresholded peaks ENCSR620VIC ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CEBPG-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF305IJQ, ENCFF391ZOJ, ENCFF419RSJ, ENCFF496GPP 674912 ENCODE Processing Pipeline 014da54ab1af05561f5b8bf9aa5822da https://www.encodeproject.org/files/ENCFF086CSF/@@download/ENCFF086CSF.bed.gz GRCh38 released borderline replicate concordance, missing genetic modification characterization ENCFF707BHB bigBed narrowPeak optimal idr thresholded peaks ENCSR620VIC ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CEBPG-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF086CSF 1275480 ENCODE Processing Pipeline 5c22ef462c2230663618e63f9a8712fb https://www.encodeproject.org/files/ENCFF707BHB/@@download/ENCFF707BHB.bigBed GRCh38 released borderline replicate concordance, missing genetic modification characterization ENCFF368TTO bigBed narrowPeak optimal idr thresholded peaks ENCSR620VIC ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CEBPG-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF606CCB 1127075 ENCODE Processing Pipeline f3ab9453c74a1407c31ef516d4c608ad https://www.encodeproject.org/files/ENCFF368TTO/@@download/ENCFF368TTO.bigBed hg19 released borderline replicate concordance, missing genetic modification characterization ENCFF606CCB bed narrowPeak optimal idr thresholded peaks ENCSR620VIC ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-CEBPG-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF001TDO, ENCFF014ZNK, ENCFF593QEG, ENCFF851RZA 580428 ENCODE Processing Pipeline 36b3049693b2c5d3cc2c9991f4dbc99a https://www.encodeproject.org/files/ENCFF606CCB/@@download/ENCFF606CCB.bed.gz hg19 released borderline replicate concordance, missing genetic modification characterization ENCFF000QKB bam alignments ENCSR000BKU ChIP-seq EFO:0002067 K562 cell line Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 2 1 303331632 Richard Myers, HAIB e0837fec24ce66b8170987618c2f3212 https://www.encodeproject.org/files/ENCFF000QKB/@@download/ENCFF000QKB.bam hg19 archived mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample, missing derived_from insufficient replicate concordance, control insufficient read depth, insufficient read depth extremely low read depth ENCFF000QKC bigBed broadPeak peaks ENCSR000BKU ChIP-seq EFO:0002067 K562 cell line Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1 1 ENCFF001UME 599837 Richard Myers, HAIB 77f3d828340eed4d06c2ca51309ca427 https://www.encodeproject.org/files/ENCFF000QKC/@@download/ENCFF000QKC.bigBed hg19 archived mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, control insufficient read depth, insufficient read depth extremely low read depth ENCFF000QKD bigBed broadPeak peaks ENCSR000BKU ChIP-seq EFO:0002067 K562 cell line Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 2 1 ENCFF001UMD 231287 Richard Myers, HAIB f7ff890343f10cae9ed42cc7c2eb60b8 https://www.encodeproject.org/files/ENCFF000QKD/@@download/ENCFF000QKD.bigBed hg19 archived mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, control insufficient read depth, insufficient read depth extremely low read depth ENCFF000QKE bam alignments ENCSR000BKU ChIP-seq EFO:0002067 K562 cell line Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1 1 635311224 Richard Myers, HAIB b421f68480e06961bfc95efd8ec9557b https://www.encodeproject.org/files/ENCFF000QKE/@@download/ENCFF000QKE.bam hg19 archived mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample, missing derived_from insufficient replicate concordance, control insufficient read depth, insufficient read depth extremely low read depth ENCFF000QKG bigWig raw signal ENCSR000BKU ChIP-seq EFO:0002067 K562 cell line Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1 1 26670095 Richard Myers, HAIB 8c353db96c88331df83bd2c5831cd1d7 https://www.encodeproject.org/files/ENCFF000QKG/@@download/ENCFF000QKG.bigWig hg19 archived mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample, missing derived_from insufficient replicate concordance, control insufficient read depth, insufficient read depth extremely low read depth ENCFF000QKH bigWig raw signal ENCSR000BKU ChIP-seq EFO:0002067 K562 cell line Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 2 1 4443884 Richard Myers, HAIB 7d1424ec500c2406e16aeda1a6dfa9fa https://www.encodeproject.org/files/ENCFF000QKH/@@download/ENCFF000QKH.bigWig hg19 archived mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample, missing derived_from insufficient replicate concordance, control insufficient read depth, insufficient read depth extremely low read depth ENCFF000QKJ fastq reads ENCSR000BKU ChIP-seq EFO:0002067 K562 cell line Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 2 1 36 single-ended 277768003 Richard Myers, HAIB 5071dc49ea385d8ffcde4c3d0e3e7e91 https://www.encodeproject.org/files/ENCFF000QKJ/@@download/ENCFF000QKJ.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000QEX/ released mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, control insufficient read depth, insufficient read depth extremely low read depth ENCFF000QKK fastq reads ENCSR000BKU ChIP-seq EFO:0002067 K562 cell line Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1 1 36 single-ended 657890473 Richard Myers, HAIB fea12e86b688cfb06465f1c1d4d6bbd5 https://www.encodeproject.org/files/ENCFF000QKK/@@download/ENCFF000QKK.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000QEX/ released mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, control insufficient read depth, insufficient read depth extremely low read depth ENCFF001UMD bed broadPeak peaks ENCSR000BKU ChIP-seq EFO:0002067 K562 cell line Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 2 1 120611 Richard Myers, HAIB ef9106ed675a4543afaeaa68cad36c2a https://www.encodeproject.org/files/ENCFF001UMD/@@download/ENCFF001UMD.bed.gz hg19 archived mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample, missing derived_from insufficient replicate concordance, control insufficient read depth, insufficient read depth extremely low read depth ENCFF001UME bed broadPeak peaks ENCSR000BKU ChIP-seq EFO:0002067 K562 cell line Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1 1 383870 Richard Myers, HAIB 646e15a4bc1fecc7b9e6971f6d8bfbae https://www.encodeproject.org/files/ENCFF001UME/@@download/ENCFF001UME.bed.gz hg19 archived mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample, missing derived_from insufficient replicate concordance, control insufficient read depth, insufficient read depth extremely low read depth ENCFF002CMW bed narrowPeak optimal idr thresholded peaks ENCSR000BKU ChIP-seq EFO:0002067 K562 cell line Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 255495 ENCODE Consortium Analysis Working Group ac07a1c66425f00441835fc502af0c71 https://www.encodeproject.org/files/ENCFF002CMW/@@download/ENCFF002CMW.bed.gz hg19 archived mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample, missing derived_from insufficient replicate concordance, control insufficient read depth, insufficient read depth extremely low read depth ENCFF524QRO bigBed narrowPeak optimal idr thresholded peaks ENCSR000BKU ChIP-seq EFO:0002067 K562 cell line Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE ENCFF002CMW 518952 ENCODE Consortium 9c1a6b186e316b1742054273f548508d https://www.encodeproject.org/files/ENCFF524QRO/@@download/ENCFF524QRO.bigBed hg19 archived mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, control insufficient read depth, insufficient read depth extremely low read depth ENCFF543BDT bam unfiltered alignments ENCSR000BKU ChIP-seq EFO:0002067 K562 cell line Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000QKJ, ENCFF643CGH 352412702 ENCODE Processing Pipeline 4c3d6367b9457ca5bbfaee3cdeef9c8b https://www.encodeproject.org/files/ENCFF543BDT/@@download/ENCFF543BDT.bam GRCh38 released mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, control insufficient read depth, insufficient read depth extremely low read depth ENCFF044TAL bam alignments ENCSR000BKU ChIP-seq EFO:0002067 K562 cell line Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000QKJ, ENCFF643CGH 169814671 ENCODE Processing Pipeline c9b5f63070b8e5e1254c02bfb40d97d2 https://www.encodeproject.org/files/ENCFF044TAL/@@download/ENCFF044TAL.bam GRCh38 released mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, control insufficient read depth, insufficient read depth extremely low read depth ENCFF782TYI bam unfiltered alignments ENCSR000BKU ChIP-seq EFO:0002067 K562 cell line Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000QKK, ENCFF643CGH 771561431 ENCODE Processing Pipeline a5f350707d59af5e195cd5df64342ae6 https://www.encodeproject.org/files/ENCFF782TYI/@@download/ENCFF782TYI.bam GRCh38 released mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, control insufficient read depth, insufficient read depth extremely low read depth ENCFF651HPM bam alignments ENCSR000BKU ChIP-seq EFO:0002067 K562 cell line Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000QKK, ENCFF643CGH 270423140 ENCODE Processing Pipeline 97698697152df239505bc2c050dffd49 https://www.encodeproject.org/files/ENCFF651HPM/@@download/ENCFF651HPM.bam GRCh38 released mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, control insufficient read depth, insufficient read depth extremely low read depth ENCFF397WYE bam unfiltered alignments ENCSR000BKU ChIP-seq EFO:0002067 K562 cell line Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000QKJ, ENCFF807MUK 353138347 ENCODE Processing Pipeline b75e326fd6f3640c8727cddfe26b302b https://www.encodeproject.org/files/ENCFF397WYE/@@download/ENCFF397WYE.bam hg19 released mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, control insufficient read depth, insufficient read depth extremely low read depth ENCFF374QJL bam alignments ENCSR000BKU ChIP-seq EFO:0002067 K562 cell line Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000QKJ, ENCFF807MUK 166901482 ENCODE Processing Pipeline 641987233cf859928d06dd5e7306e296 https://www.encodeproject.org/files/ENCFF374QJL/@@download/ENCFF374QJL.bam hg19 released mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, control insufficient read depth, insufficient read depth extremely low read depth ENCFF985HYK bam unfiltered alignments ENCSR000BKU ChIP-seq EFO:0002067 K562 cell line Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000QKK, ENCFF807MUK 770939603 ENCODE Processing Pipeline d2b6792e370fd3f88d9aadc90d3d9c9f https://www.encodeproject.org/files/ENCFF985HYK/@@download/ENCFF985HYK.bam hg19 released mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, control insufficient read depth, insufficient read depth extremely low read depth ENCFF974OCA bam alignments ENCSR000BKU ChIP-seq EFO:0002067 K562 cell line Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000QKK, ENCFF807MUK 270634558 ENCODE Processing Pipeline ad27b4d06443569067b685bffac04e51 https://www.encodeproject.org/files/ENCFF974OCA/@@download/ENCFF974OCA.bam hg19 released mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, control insufficient read depth, insufficient read depth extremely low read depth ENCFF075WWP bigWig signal p-value ENCSR000BKU ChIP-seq EFO:0002067 K562 cell line Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1 ENCFF651HPM, ENCFF772PJM 217958466 ENCODE Processing Pipeline 0599efd0f47ec55ab5449832f86b375c https://www.encodeproject.org/files/ENCFF075WWP/@@download/ENCFF075WWP.bigWig GRCh38 released mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, control insufficient read depth, insufficient read depth extremely low read depth ENCFF167RTT bigWig signal p-value ENCSR000BKU ChIP-seq EFO:0002067 K562 cell line Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 2 ENCFF044TAL, ENCFF772PJM 154449335 ENCODE Processing Pipeline 28a511f6c969f0e46642fddaa7b76154 https://www.encodeproject.org/files/ENCFF167RTT/@@download/ENCFF167RTT.bigWig GRCh38 released mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, control insufficient read depth, insufficient read depth extremely low read depth ENCFF315PCN bigWig signal p-value ENCSR000BKU ChIP-seq EFO:0002067 K562 cell line Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF044TAL, ENCFF651HPM, ENCFF772PJM 206277255 ENCODE Processing Pipeline 798e2d6d7705e9a2785d6a21ea6bf67a https://www.encodeproject.org/files/ENCFF315PCN/@@download/ENCFF315PCN.bigWig GRCh38 released mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, control insufficient read depth, insufficient read depth extremely low read depth ENCFF654LSD bigWig fold change over control ENCSR000BKU ChIP-seq EFO:0002067 K562 cell line Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF044TAL, ENCFF651HPM, ENCFF772PJM 176061920 ENCODE Processing Pipeline ca038cfeb126a15a9a1d33988513ff2e https://www.encodeproject.org/files/ENCFF654LSD/@@download/ENCFF654LSD.bigWig GRCh38 released mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, control insufficient read depth, insufficient read depth extremely low read depth ENCFF381ZVE bed narrowPeak peaks ENCSR000BKU ChIP-seq EFO:0002067 K562 cell line Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1 ENCFF651HPM, ENCFF772PJM 3454051 ENCODE Processing Pipeline f078899340498ea6c7478561f691dc3f https://www.encodeproject.org/files/ENCFF381ZVE/@@download/ENCFF381ZVE.bed.gz GRCh38 released mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, control insufficient read depth, insufficient read depth extremely low read depth ENCFF371NVU bed narrowPeak conservative idr thresholded peaks ENCSR000BKU ChIP-seq EFO:0002067 K562 cell line Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF100YJH, ENCFF203XPP, ENCFF381ZVE, ENCFF419RSJ 79747 ENCODE Processing Pipeline 629c951b387e804bb8e8dff059b38051 https://www.encodeproject.org/files/ENCFF371NVU/@@download/ENCFF371NVU.bed.gz GRCh38 released mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, control insufficient read depth, insufficient read depth extremely low read depth ENCFF160WGC bigBed narrowPeak conservative idr thresholded peaks ENCSR000BKU ChIP-seq EFO:0002067 K562 cell line Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF371NVU 192553 ENCODE Processing Pipeline 3966947165825253d5f77f45f3681967 https://www.encodeproject.org/files/ENCFF160WGC/@@download/ENCFF160WGC.bigBed GRCh38 released mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, control insufficient read depth, insufficient read depth extremely low read depth ENCFF439VDJ bigBed narrowPeak optimal idr thresholded peaks ENCSR000BKU ChIP-seq EFO:0002067 K562 cell line Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF953BTB 518102 ENCODE Processing Pipeline e70628eaa6d699e5c06772e73636daec https://www.encodeproject.org/files/ENCFF439VDJ/@@download/ENCFF439VDJ.bigBed GRCh38 released mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, control insufficient read depth, insufficient read depth extremely low read depth ENCFF203XPP bed narrowPeak peaks ENCSR000BKU ChIP-seq EFO:0002067 K562 cell line Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF044TAL, ENCFF651HPM, ENCFF772PJM 4446136 ENCODE Processing Pipeline ea2672c46404418e5d6d7a259ed4b96e https://www.encodeproject.org/files/ENCFF203XPP/@@download/ENCFF203XPP.bed.gz GRCh38 released mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, control insufficient read depth, insufficient read depth extremely low read depth ENCFF469QBZ bigWig fold change over control ENCSR000BKU ChIP-seq EFO:0002067 K562 cell line Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 2 ENCFF044TAL, ENCFF772PJM 78425312 ENCODE Processing Pipeline f1953f9b61f0b23a87db45c0939e66c5 https://www.encodeproject.org/files/ENCFF469QBZ/@@download/ENCFF469QBZ.bigWig GRCh38 released mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, control insufficient read depth, insufficient read depth extremely low read depth ENCFF100YJH bed narrowPeak peaks ENCSR000BKU ChIP-seq EFO:0002067 K562 cell line Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 2 ENCFF044TAL, ENCFF772PJM 1789536 ENCODE Processing Pipeline fbf283ba506834372e630238b384c39e https://www.encodeproject.org/files/ENCFF100YJH/@@download/ENCFF100YJH.bed.gz GRCh38 released mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, control insufficient read depth, insufficient read depth extremely low read depth ENCFF570LZA bigBed narrowPeak peaks ENCSR000BKU ChIP-seq EFO:0002067 K562 cell line Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1 ENCFF381ZVE 7632821 ENCODE Processing Pipeline 8c5083c0a7eeb26abfec2207a0c75944 https://www.encodeproject.org/files/ENCFF570LZA/@@download/ENCFF570LZA.bigBed GRCh38 released mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, control insufficient read depth, insufficient read depth extremely low read depth ENCFF924PLW bigBed narrowPeak peaks ENCSR000BKU ChIP-seq EFO:0002067 K562 cell line Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF203XPP 9883640 ENCODE Processing Pipeline 67150ef851e08c0dbad9e602351b591b https://www.encodeproject.org/files/ENCFF924PLW/@@download/ENCFF924PLW.bigBed GRCh38 released mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, control insufficient read depth, insufficient read depth extremely low read depth ENCFF953BTB bed narrowPeak optimal idr thresholded peaks ENCSR000BKU ChIP-seq EFO:0002067 K562 cell line Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF100YJH, ENCFF203XPP, ENCFF381ZVE, ENCFF419RSJ 274304 ENCODE Processing Pipeline 5e0d8c3af8f5ee9de64681feb5dc4bfe https://www.encodeproject.org/files/ENCFF953BTB/@@download/ENCFF953BTB.bed.gz GRCh38 released mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, control insufficient read depth, insufficient read depth extremely low read depth ENCFF674DGV bigWig fold change over control ENCSR000BKU ChIP-seq EFO:0002067 K562 cell line Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1 ENCFF651HPM, ENCFF772PJM 109602790 ENCODE Processing Pipeline 0c707e906d7c2ff0156d056bbe355c5c https://www.encodeproject.org/files/ENCFF674DGV/@@download/ENCFF674DGV.bigWig GRCh38 released mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, control insufficient read depth, insufficient read depth extremely low read depth ENCFF821EZE bigBed narrowPeak peaks ENCSR000BKU ChIP-seq EFO:0002067 K562 cell line Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 2 ENCFF100YJH 3755275 ENCODE Processing Pipeline d69bcff8a3f5d5e0e5755bb0f185ac36 https://www.encodeproject.org/files/ENCFF821EZE/@@download/ENCFF821EZE.bigBed GRCh38 released mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, control insufficient read depth, insufficient read depth extremely low read depth ENCFF366SGW bigWig signal p-value ENCSR000BKU ChIP-seq EFO:0002067 K562 cell line Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1 ENCFF750MIM, ENCFF974OCA 170261201 ENCODE Processing Pipeline 3b1f81381021d057203c375826adfb97 https://www.encodeproject.org/files/ENCFF366SGW/@@download/ENCFF366SGW.bigWig hg19 released mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, control insufficient read depth, insufficient read depth extremely low read depth ENCFF688PRD bigWig signal p-value ENCSR000BKU ChIP-seq EFO:0002067 K562 cell line Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 2 ENCFF374QJL, ENCFF750MIM 155638470 ENCODE Processing Pipeline 59970786685fea7aec0a6c0a02a9f50b https://www.encodeproject.org/files/ENCFF688PRD/@@download/ENCFF688PRD.bigWig hg19 released mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, control insufficient read depth, insufficient read depth extremely low read depth ENCFF688PET bigWig fold change over control ENCSR000BKU ChIP-seq EFO:0002067 K562 cell line Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1 ENCFF750MIM, ENCFF974OCA 109352833 ENCODE Processing Pipeline 371a1f2af90929a3173ca03defc51e5d https://www.encodeproject.org/files/ENCFF688PET/@@download/ENCFF688PET.bigWig hg19 released mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, control insufficient read depth, insufficient read depth extremely low read depth ENCFF265UDZ bigWig signal p-value ENCSR000BKU ChIP-seq EFO:0002067 K562 cell line Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF374QJL, ENCFF750MIM, ENCFF974OCA 206239784 ENCODE Processing Pipeline a1a9a74b32c64e36e13ba604563b8dbf https://www.encodeproject.org/files/ENCFF265UDZ/@@download/ENCFF265UDZ.bigWig hg19 released mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, control insufficient read depth, insufficient read depth extremely low read depth ENCFF608RBZ bed narrowPeak peaks ENCSR000BKU ChIP-seq EFO:0002067 K562 cell line Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1 ENCFF750MIM, ENCFF974OCA 3450296 ENCODE Processing Pipeline 3f12a4be35f1c4062bfcc2b1a3d8e56e https://www.encodeproject.org/files/ENCFF608RBZ/@@download/ENCFF608RBZ.bed.gz hg19 released mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, control insufficient read depth, insufficient read depth extremely low read depth ENCFF475ICG bed narrowPeak peaks ENCSR000BKU ChIP-seq EFO:0002067 K562 cell line Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 2 ENCFF374QJL, ENCFF750MIM 1785632 ENCODE Processing Pipeline 985f27c035f182ff8942dea5b697eda7 https://www.encodeproject.org/files/ENCFF475ICG/@@download/ENCFF475ICG.bed.gz hg19 released mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, control insufficient read depth, insufficient read depth extremely low read depth ENCFF735VYZ bigWig fold change over control ENCSR000BKU ChIP-seq EFO:0002067 K562 cell line Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 2 ENCFF374QJL, ENCFF750MIM 79659303 ENCODE Processing Pipeline b93b775536eb8f773ddc98c5fdd8b357 https://www.encodeproject.org/files/ENCFF735VYZ/@@download/ENCFF735VYZ.bigWig hg19 released mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, control insufficient read depth, insufficient read depth extremely low read depth ENCFF480ZET bigWig fold change over control ENCSR000BKU ChIP-seq EFO:0002067 K562 cell line Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF374QJL, ENCFF750MIM, ENCFF974OCA 176388335 ENCODE Processing Pipeline 4692fd23387bf4c0b5b4158750d6a6c7 https://www.encodeproject.org/files/ENCFF480ZET/@@download/ENCFF480ZET.bigWig hg19 released mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, control insufficient read depth, insufficient read depth extremely low read depth ENCFF949CCF bigBed narrowPeak peaks ENCSR000BKU ChIP-seq EFO:0002067 K562 cell line Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1 ENCFF608RBZ 7625007 ENCODE Processing Pipeline 64d2d9a22058c7e3befa069035ecb1db https://www.encodeproject.org/files/ENCFF949CCF/@@download/ENCFF949CCF.bigBed hg19 released mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, control insufficient read depth, insufficient read depth extremely low read depth ENCFF391EZP bigBed narrowPeak peaks ENCSR000BKU ChIP-seq EFO:0002067 K562 cell line Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 2 ENCFF475ICG 3766872 ENCODE Processing Pipeline 463639b36d9a7bca83f3263406067911 https://www.encodeproject.org/files/ENCFF391EZP/@@download/ENCFF391EZP.bigBed hg19 released mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, control insufficient read depth, insufficient read depth extremely low read depth ENCFF100JMN bed narrowPeak conservative idr thresholded peaks ENCSR000BKU ChIP-seq EFO:0002067 K562 cell line Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF001TDO, ENCFF475ICG, ENCFF608RBZ, ENCFF897DAT 81332 ENCODE Processing Pipeline b6e9d62406a49da4bf266c7a07445902 https://www.encodeproject.org/files/ENCFF100JMN/@@download/ENCFF100JMN.bed.gz hg19 released mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, control insufficient read depth, insufficient read depth extremely low read depth ENCFF926FUM bed narrowPeak optimal idr thresholded peaks ENCSR000BKU ChIP-seq EFO:0002067 K562 cell line Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF001TDO, ENCFF475ICG, ENCFF608RBZ, ENCFF897DAT 268837 ENCODE Processing Pipeline 73708b5a1b2700584fc477fdee757ee3 https://www.encodeproject.org/files/ENCFF926FUM/@@download/ENCFF926FUM.bed.gz hg19 released mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, control insufficient read depth, insufficient read depth extremely low read depth ENCFF897DAT bed narrowPeak peaks ENCSR000BKU ChIP-seq EFO:0002067 K562 cell line Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF374QJL, ENCFF750MIM, ENCFF974OCA 4473636 ENCODE Processing Pipeline c14c00910a3b214c2e00ba89e45afb83 https://www.encodeproject.org/files/ENCFF897DAT/@@download/ENCFF897DAT.bed.gz hg19 released mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, control insufficient read depth, insufficient read depth extremely low read depth ENCFF164HWB bigBed narrowPeak conservative idr thresholded peaks ENCSR000BKU ChIP-seq EFO:0002067 K562 cell line Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF100JMN 194921 ENCODE Processing Pipeline 5792bd7c6c5e7b1819e47b6308938fdf https://www.encodeproject.org/files/ENCFF164HWB/@@download/ENCFF164HWB.bigBed hg19 released mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, control insufficient read depth, insufficient read depth extremely low read depth ENCFF823KMF bigBed narrowPeak optimal idr thresholded peaks ENCSR000BKU ChIP-seq EFO:0002067 K562 cell line Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF926FUM 520358 ENCODE Processing Pipeline 30d13bce5ee5a789b4fe59f3511b3c64 https://www.encodeproject.org/files/ENCFF823KMF/@@download/ENCFF823KMF.bigBed hg19 released mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, control insufficient read depth, insufficient read depth extremely low read depth ENCFF855RCD bigBed narrowPeak peaks ENCSR000BKU ChIP-seq EFO:0002067 K562 cell line Homo sapiens YY1-human ENCAB000ANT DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF897DAT 9931657 ENCODE Processing Pipeline 2ded87aec0595cfd73c59336e98a4a39 https://www.encodeproject.org/files/ENCFF855RCD/@@download/ENCFF855RCD.bigBed hg19 released mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient replicate concordance, control insufficient read depth, insufficient read depth extremely low read depth ENCFF000QCD bam alignments ENCSR000BRS ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2F2-human ENCAB000AJH DNA see document see document False 2012-02-29 ENCODE 2 ENCFF000QCR 1348401713 Richard Myers, HAIB 274e8e201f61826fd4f23be489d6334e https://www.encodeproject.org/files/ENCFF000QCD/@@download/ENCFF000QCD.bam hg19 archived inconsistent platforms, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample ENCFF000QCE bigBed broadPeak peaks ENCSR000BRS ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2F2-human ENCAB000AJH DNA see document see document False 2012-02-29 ENCODE 1 1 ENCFF001UKL 690036 Richard Myers, HAIB af2ee5eabf43b702b76d2d2fb4fbf244 https://www.encodeproject.org/files/ENCFF000QCE/@@download/ENCFF000QCE.bigBed hg19 archived inconsistent platforms, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample ENCFF000QCF bam alignments ENCSR000BRS ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2F2-human ENCAB000AJH DNA see document see document False 2012-02-29 ENCODE 1 ENCFF000QCS 1987058617 Richard Myers, HAIB c028dab7ff95002af578ea525722b9a7 https://www.encodeproject.org/files/ENCFF000QCF/@@download/ENCFF000QCF.bam hg19 archived inconsistent platforms, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample ENCFF000QCG bigBed broadPeak peaks ENCSR000BRS ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2F2-human ENCAB000AJH DNA see document see document False 2012-02-29 ENCODE 2 1 ENCFF001UKM 742185 Richard Myers, HAIB 64332318bbc1a77d39aea3c1733ca177 https://www.encodeproject.org/files/ENCFF000QCG/@@download/ENCFF000QCG.bigBed hg19 archived inconsistent platforms, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample ENCFF000QCJ bigWig raw signal ENCSR000BRS ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2F2-human ENCAB000AJH DNA see document see document False 2012-02-29 ENCODE 1 1 41141940 Richard Myers, HAIB 49246d880203d36d460629d23066edd3 https://www.encodeproject.org/files/ENCFF000QCJ/@@download/ENCFF000QCJ.bigWig hg19 archived inconsistent platforms, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample, missing derived_from ENCFF000QCK bigWig raw signal ENCSR000BRS ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2F2-human ENCAB000AJH DNA see document see document False 2012-02-29 ENCODE 2 1 29971547 Richard Myers, HAIB 71e6e8cfcd19007d5c21552fade5c38f https://www.encodeproject.org/files/ENCFF000QCK/@@download/ENCFF000QCK.bigWig hg19 archived inconsistent platforms, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample, missing derived_from ENCFF000QCR fastq reads ENCSR000BRS ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2F2-human ENCAB000AJH DNA see document see document False 2012-02-29 ENCODE 2 1 36 single-ended 1330005388 Richard Myers, HAIB 446b1dd05987f96061b3a7c14d1717da https://www.encodeproject.org/files/ENCFF000QCR/@@download/ENCFF000QCR.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000QFG/ released inconsistent platforms, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample ENCFF000QCS fastq reads ENCSR000BRS ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2F2-human ENCAB000AJH DNA see document see document False 2012-02-29 ENCODE 1 1 36 single-ended 1902729259 Richard Myers, HAIB d557658c1a157b2a3abb6b37c1aa88a5 https://www.encodeproject.org/files/ENCFF000QCS/@@download/ENCFF000QCS.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000QFG/ released inconsistent platforms, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample ENCFF001UKL bed broadPeak peaks ENCSR000BRS ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2F2-human ENCAB000AJH DNA see document see document False 2012-02-29 ENCODE 1 1 434822 Richard Myers, HAIB 5f288bddd95d7f6f8b9e48f34e8674ed https://www.encodeproject.org/files/ENCFF001UKL/@@download/ENCFF001UKL.bed.gz hg19 archived inconsistent platforms, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample, missing derived_from ENCFF001UKM bed broadPeak peaks ENCSR000BRS ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2F2-human ENCAB000AJH DNA see document see document False 2012-02-29 ENCODE 2 1 402146 Richard Myers, HAIB dacd21c37aced1dfec94f5b508976f22 https://www.encodeproject.org/files/ENCFF001UKM/@@download/ENCFF001UKM.bed.gz hg19 archived inconsistent platforms, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample, missing derived_from ENCFF002CME bed narrowPeak optimal idr thresholded peaks ENCSR000BRS ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2F2-human ENCAB000AJH DNA see document see document False 2012-02-29 ENCODE 342030 ENCODE Consortium Analysis Working Group 30d95e9beac104673ddddd030762942b https://www.encodeproject.org/files/ENCFF002CME/@@download/ENCFF002CME.bed.gz hg19 archived inconsistent platforms, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample, missing derived_from ENCFF707HNG bigBed narrowPeak optimal idr thresholded peaks ENCSR000BRS ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2F2-human ENCAB000AJH DNA see document see document False 2012-02-29 ENCODE ENCFF002CME 748081 ENCODE Consortium 486c6eddcb74e691f7ffcdf6d96d5b1f https://www.encodeproject.org/files/ENCFF707HNG/@@download/ENCFF707HNG.bigBed hg19 archived inconsistent platforms, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample ENCFF546YUW bam unfiltered alignments ENCSR000BRS ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2F2-human ENCAB000AJH DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000QCR, ENCFF643CGH 1440147058 ENCODE Processing Pipeline 1f264bf4ecf8d10fa2cefc87fe1ae891 https://www.encodeproject.org/files/ENCFF546YUW/@@download/ENCFF546YUW.bam GRCh38 released inconsistent platforms, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample ENCFF568RDF bam alignments ENCSR000BRS ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2F2-human ENCAB000AJH DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000QCR, ENCFF643CGH 737582256 ENCODE Processing Pipeline 16d0a4562e47ccb6ab824472397850d3 https://www.encodeproject.org/files/ENCFF568RDF/@@download/ENCFF568RDF.bam GRCh38 released inconsistent platforms, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample ENCFF214TVN bam unfiltered alignments ENCSR000BRS ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2F2-human ENCAB000AJH DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000QCS, ENCFF643CGH 2128466320 ENCODE Processing Pipeline fabfcfa92132e15829ac0733719a7db0 https://www.encodeproject.org/files/ENCFF214TVN/@@download/ENCFF214TVN.bam GRCh38 released inconsistent platforms, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample ENCFF665EXC bam alignments ENCSR000BRS ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2F2-human ENCAB000AJH DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000QCS, ENCFF643CGH 1344635885 ENCODE Processing Pipeline 350873e0388962d6d58faf38176b66ae https://www.encodeproject.org/files/ENCFF665EXC/@@download/ENCFF665EXC.bam GRCh38 released inconsistent platforms, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample ENCFF705VZW bam unfiltered alignments ENCSR000BRS ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2F2-human ENCAB000AJH DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000QCR, ENCFF807MUK 1438324609 ENCODE Processing Pipeline 58ae754d97d849b13055b965f11260cf https://www.encodeproject.org/files/ENCFF705VZW/@@download/ENCFF705VZW.bam hg19 released inconsistent platforms, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample ENCFF422ZRF bam alignments ENCSR000BRS ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2F2-human ENCAB000AJH DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000QCR, ENCFF807MUK 737872380 ENCODE Processing Pipeline 864f6fa952e84bc89517f6648ea6ab8b https://www.encodeproject.org/files/ENCFF422ZRF/@@download/ENCFF422ZRF.bam hg19 released inconsistent platforms, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample ENCFF911SMC bam unfiltered alignments ENCSR000BRS ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2F2-human ENCAB000AJH DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000QCS, ENCFF807MUK 2123654715 ENCODE Processing Pipeline 7f70eb81a7433033547ddf08e4f76840 https://www.encodeproject.org/files/ENCFF911SMC/@@download/ENCFF911SMC.bam hg19 released inconsistent platforms, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample ENCFF717CDL bam alignments ENCSR000BRS ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2F2-human ENCAB000AJH DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000QCS, ENCFF807MUK 1345242329 ENCODE Processing Pipeline fc223de23bd51ac63b15c759a3046544 https://www.encodeproject.org/files/ENCFF717CDL/@@download/ENCFF717CDL.bam hg19 released inconsistent platforms, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample ENCFF905NVW bigWig signal p-value ENCSR000BRS ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2F2-human ENCAB000AJH DNA see document see document False 2012-02-29 ENCODE 1 ENCFF665EXC, ENCFF836OEO 626693104 ENCODE Processing Pipeline 2b4d5ec6f318a2ee6fced89b9f9e577a https://www.encodeproject.org/files/ENCFF905NVW/@@download/ENCFF905NVW.bigWig GRCh38 released inconsistent platforms, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample ENCFF456LKX bigWig signal p-value ENCSR000BRS ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2F2-human ENCAB000AJH DNA see document see document False 2012-02-29 ENCODE 2 ENCFF568RDF, ENCFF836OEO 629918605 ENCODE Processing Pipeline 06700ed1e99d8d754591d10bd332d6d6 https://www.encodeproject.org/files/ENCFF456LKX/@@download/ENCFF456LKX.bigWig GRCh38 released inconsistent platforms, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample ENCFF945EWN bigWig signal p-value ENCSR000BRS ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2F2-human ENCAB000AJH DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF568RDF, ENCFF665EXC, ENCFF836OEO 851956326 ENCODE Processing Pipeline ddaa84bd771bc56a35d9bb1cb7825dc2 https://www.encodeproject.org/files/ENCFF945EWN/@@download/ENCFF945EWN.bigWig GRCh38 released inconsistent platforms, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample ENCFF545LQM bigWig fold change over control ENCSR000BRS ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2F2-human ENCAB000AJH DNA see document see document False 2012-02-29 ENCODE 1 ENCFF665EXC, ENCFF836OEO 661276138 ENCODE Processing Pipeline d73b7dbb3a3dea22e658b6cec2602a42 https://www.encodeproject.org/files/ENCFF545LQM/@@download/ENCFF545LQM.bigWig GRCh38 released inconsistent platforms, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample ENCFF720LZR bigWig fold change over control ENCSR000BRS ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2F2-human ENCAB000AJH DNA see document see document False 2012-02-29 ENCODE 2 ENCFF568RDF, ENCFF836OEO 462384121 ENCODE Processing Pipeline 4b88a7e482e144b3e66d2ac9a27e8a72 https://www.encodeproject.org/files/ENCFF720LZR/@@download/ENCFF720LZR.bigWig GRCh38 released inconsistent platforms, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample ENCFF600YIF bigWig fold change over control ENCSR000BRS ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2F2-human ENCAB000AJH DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF568RDF, ENCFF665EXC, ENCFF836OEO 894815134 ENCODE Processing Pipeline e2bc1b6ec9c17dd0bf9d2120ba4c62b6 https://www.encodeproject.org/files/ENCFF600YIF/@@download/ENCFF600YIF.bigWig GRCh38 released inconsistent platforms, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample ENCFF836ATN bed narrowPeak peaks ENCSR000BRS ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2F2-human ENCAB000AJH DNA see document see document False 2012-02-29 ENCODE 1 ENCFF665EXC, ENCFF836OEO 6196481 ENCODE Processing Pipeline cf5ad2caed13eecb0451f34aa62b80f1 https://www.encodeproject.org/files/ENCFF836ATN/@@download/ENCFF836ATN.bed.gz GRCh38 released inconsistent platforms, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample ENCFF933HXQ bigBed narrowPeak peaks ENCSR000BRS ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2F2-human ENCAB000AJH DNA see document see document False 2012-02-29 ENCODE 1 ENCFF836ATN 13134261 ENCODE Processing Pipeline b2e7e5a199b7bf6e36d2012673a60241 https://www.encodeproject.org/files/ENCFF933HXQ/@@download/ENCFF933HXQ.bigBed GRCh38 released inconsistent platforms, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample ENCFF747XLZ bed narrowPeak peaks ENCSR000BRS ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2F2-human ENCAB000AJH DNA see document see document False 2012-02-29 ENCODE 2 ENCFF568RDF, ENCFF836OEO 6630979 ENCODE Processing Pipeline ee1d7f7b2940d61745d4c49f19426578 https://www.encodeproject.org/files/ENCFF747XLZ/@@download/ENCFF747XLZ.bed.gz GRCh38 released inconsistent platforms, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample ENCFF796IXS bigBed narrowPeak peaks ENCSR000BRS ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2F2-human ENCAB000AJH DNA see document see document False 2012-02-29 ENCODE 2 ENCFF747XLZ 12496775 ENCODE Processing Pipeline 599406d1c0e2983ff77385a7921a2682 https://www.encodeproject.org/files/ENCFF796IXS/@@download/ENCFF796IXS.bigBed GRCh38 released inconsistent platforms, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample ENCFF567VBY bed narrowPeak peaks ENCSR000BRS ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2F2-human ENCAB000AJH DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF568RDF, ENCFF665EXC, ENCFF836OEO 6906555 ENCODE Processing Pipeline ce4d8a7d74914fb9f611be77bb32e571 https://www.encodeproject.org/files/ENCFF567VBY/@@download/ENCFF567VBY.bed.gz GRCh38 released inconsistent platforms, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample ENCFF927ZUH bigBed narrowPeak conservative idr thresholded peaks ENCSR000BRS ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2F2-human ENCAB000AJH DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF056DZM 543972 ENCODE Processing Pipeline 786ec440ec44ab9d6fe46f3488ab9d84 https://www.encodeproject.org/files/ENCFF927ZUH/@@download/ENCFF927ZUH.bigBed GRCh38 released inconsistent platforms, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample ENCFF518VFK bigBed narrowPeak peaks ENCSR000BRS ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2F2-human ENCAB000AJH DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF567VBY 12868576 ENCODE Processing Pipeline a16d2832303095ff5156456b8c90ea14 https://www.encodeproject.org/files/ENCFF518VFK/@@download/ENCFF518VFK.bigBed GRCh38 released inconsistent platforms, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample ENCFF056DZM bed narrowPeak conservative idr thresholded peaks ENCSR000BRS ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2F2-human ENCAB000AJH DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF419RSJ, ENCFF567VBY, ENCFF747XLZ, ENCFF836ATN 292624 ENCODE Processing Pipeline a04015dacc8ce1a693d658f9fb715acd https://www.encodeproject.org/files/ENCFF056DZM/@@download/ENCFF056DZM.bed.gz GRCh38 released inconsistent platforms, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample ENCFF118HUH bed narrowPeak optimal idr thresholded peaks ENCSR000BRS ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2F2-human ENCAB000AJH DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF419RSJ, ENCFF567VBY, ENCFF747XLZ, ENCFF836ATN 357044 ENCODE Processing Pipeline 1040399115870575346daaba5c6bc46a https://www.encodeproject.org/files/ENCFF118HUH/@@download/ENCFF118HUH.bed.gz GRCh38 released inconsistent platforms, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample ENCFF580CVU bigBed narrowPeak optimal idr thresholded peaks ENCSR000BRS ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2F2-human ENCAB000AJH DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF118HUH 782092 ENCODE Processing Pipeline 37f86405796bb3e3d6d25f895a2530b8 https://www.encodeproject.org/files/ENCFF580CVU/@@download/ENCFF580CVU.bigBed GRCh38 released inconsistent platforms, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample ENCFF490MZK bigWig signal p-value ENCSR000BRS ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2F2-human ENCAB000AJH DNA see document see document False 2012-02-29 ENCODE 2 ENCFF422ZRF, ENCFF522HDC 554586191 ENCODE Processing Pipeline 247fa3b1ed32ef96e60c6e731a77a9e5 https://www.encodeproject.org/files/ENCFF490MZK/@@download/ENCFF490MZK.bigWig hg19 released inconsistent platforms, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample ENCFF234EFL bigWig fold change over control ENCSR000BRS ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2F2-human ENCAB000AJH DNA see document see document False 2012-02-29 ENCODE 1 ENCFF522HDC, ENCFF717CDL 666820326 ENCODE Processing Pipeline ea1f8d274823ecec84e85b0750dff04a https://www.encodeproject.org/files/ENCFF234EFL/@@download/ENCFF234EFL.bigWig hg19 released inconsistent platforms, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample ENCFF400ALV bigWig fold change over control ENCSR000BRS ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2F2-human ENCAB000AJH DNA see document see document False 2012-02-29 ENCODE 2 ENCFF422ZRF, ENCFF522HDC 463975133 ENCODE Processing Pipeline 944653ee666b1122e1befb30fa2bec0a https://www.encodeproject.org/files/ENCFF400ALV/@@download/ENCFF400ALV.bigWig hg19 released inconsistent platforms, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample ENCFF977EEA bigWig signal p-value ENCSR000BRS ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2F2-human ENCAB000AJH DNA see document see document False 2012-02-29 ENCODE 1 ENCFF522HDC, ENCFF717CDL 746805463 ENCODE Processing Pipeline f6f0cb51b5217984b7f37c72ea75ebde https://www.encodeproject.org/files/ENCFF977EEA/@@download/ENCFF977EEA.bigWig hg19 released inconsistent platforms, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample ENCFF571BKM bigWig signal p-value ENCSR000BRS ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2F2-human ENCAB000AJH DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF422ZRF, ENCFF522HDC, ENCFF717CDL 848006264 ENCODE Processing Pipeline 5d089cc1502a961d4317275de0e53929 https://www.encodeproject.org/files/ENCFF571BKM/@@download/ENCFF571BKM.bigWig hg19 released inconsistent platforms, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample ENCFF622IDZ bed narrowPeak peaks ENCSR000BRS ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2F2-human ENCAB000AJH DNA see document see document False 2012-02-29 ENCODE 1 ENCFF522HDC, ENCFF717CDL 6199883 ENCODE Processing Pipeline 774fddafb4755bcf348c1ddbf015a7a7 https://www.encodeproject.org/files/ENCFF622IDZ/@@download/ENCFF622IDZ.bed.gz hg19 released inconsistent platforms, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample ENCFF829WNA bed narrowPeak peaks ENCSR000BRS ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2F2-human ENCAB000AJH DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF422ZRF, ENCFF522HDC, ENCFF717CDL 6908852 ENCODE Processing Pipeline 2db48d90c72ed8698da70add975ce764 https://www.encodeproject.org/files/ENCFF829WNA/@@download/ENCFF829WNA.bed.gz hg19 released inconsistent platforms, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample ENCFF383GMZ bigBed narrowPeak peaks ENCSR000BRS ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2F2-human ENCAB000AJH DNA see document see document False 2012-02-29 ENCODE 1 ENCFF622IDZ 13133089 ENCODE Processing Pipeline 00e31fa0e324b4d035f095af2ce57157 https://www.encodeproject.org/files/ENCFF383GMZ/@@download/ENCFF383GMZ.bigBed hg19 released inconsistent platforms, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample ENCFF804EEH bigBed narrowPeak peaks ENCSR000BRS ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2F2-human ENCAB000AJH DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF829WNA 12868424 ENCODE Processing Pipeline 2b3cedb01a66abe2cee8fd7a4dcdbb9f https://www.encodeproject.org/files/ENCFF804EEH/@@download/ENCFF804EEH.bigBed hg19 released inconsistent platforms, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample ENCFF335LTU bigWig fold change over control ENCSR000BRS ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2F2-human ENCAB000AJH DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF422ZRF, ENCFF522HDC, ENCFF717CDL 889485498 ENCODE Processing Pipeline 1def10ada690b21aad63422e482e70d3 https://www.encodeproject.org/files/ENCFF335LTU/@@download/ENCFF335LTU.bigWig hg19 released inconsistent platforms, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample ENCFF952DON bed narrowPeak peaks ENCSR000BRS ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2F2-human ENCAB000AJH DNA see document see document False 2012-02-29 ENCODE 2 ENCFF422ZRF, ENCFF522HDC 6654612 ENCODE Processing Pipeline 795e5b41a86fd9c0fb2ecffc0e96b4aa https://www.encodeproject.org/files/ENCFF952DON/@@download/ENCFF952DON.bed.gz hg19 released inconsistent platforms, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample ENCFF642XXO bigBed narrowPeak peaks ENCSR000BRS ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2F2-human ENCAB000AJH DNA see document see document False 2012-02-29 ENCODE 2 ENCFF952DON 12522362 ENCODE Processing Pipeline 3d49bacc9c1550cf0276472c73c88552 https://www.encodeproject.org/files/ENCFF642XXO/@@download/ENCFF642XXO.bigBed hg19 released inconsistent platforms, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample ENCFF823SRC bed narrowPeak conservative idr thresholded peaks ENCSR000BRS ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2F2-human ENCAB000AJH DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF001TDO, ENCFF622IDZ, ENCFF829WNA, ENCFF952DON 292585 ENCODE Processing Pipeline 4293d1c1e72cc95e6d0f0b9e2f4a7be1 https://www.encodeproject.org/files/ENCFF823SRC/@@download/ENCFF823SRC.bed.gz hg19 released inconsistent platforms, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample ENCFF613RMS bigBed narrowPeak conservative idr thresholded peaks ENCSR000BRS ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2F2-human ENCAB000AJH DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF823SRC 543700 ENCODE Processing Pipeline 54b59b7f2a25fbf1a24f39cd3bd59635 https://www.encodeproject.org/files/ENCFF613RMS/@@download/ENCFF613RMS.bigBed hg19 released inconsistent platforms, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample ENCFF077OSF bigBed narrowPeak optimal idr thresholded peaks ENCSR000BRS ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2F2-human ENCAB000AJH DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF255EOB 787219 ENCODE Processing Pipeline bbef0d15b225747fa462b20cc957007a https://www.encodeproject.org/files/ENCFF077OSF/@@download/ENCFF077OSF.bigBed hg19 released inconsistent platforms, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample ENCFF255EOB bed narrowPeak optimal idr thresholded peaks ENCSR000BRS ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2F2-human ENCAB000AJH DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF001TDO, ENCFF622IDZ, ENCFF829WNA, ENCFF952DON 359095 ENCODE Processing Pipeline 261091a7cd8dcdf58adf98e3c6d32d2b https://www.encodeproject.org/files/ENCFF255EOB/@@download/ENCFF255EOB.bed.gz hg19 released inconsistent platforms, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample ENCFF828VUL fastq reads ENCSR764YDL ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR0B1-human ENCAB651SYY DNA False 2018-01-26 ENCODE 2 1 100 paired-ended 2 ENCFF685UUM 4170786120 Michael Snyder, Stanford c30f8e216c9a497469112e7fe163f6ba https://www.encodeproject.org/files/ENCFF828VUL/@@download/ENCFF828VUL.fastq.gz Illumina HiSeq 4000 /files/ENCFF837MIV/ released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF460ZWD fastq reads ENCSR764YDL ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR0B1-human ENCAB651SYY DNA False 2018-01-26 ENCODE 1 1 100 paired-ended 1 ENCFF301KVJ 2728891077 Michael Snyder, Stanford 85825146b28061678e80332b0da34453 https://www.encodeproject.org/files/ENCFF460ZWD/@@download/ENCFF460ZWD.fastq.gz Illumina HiSeq 4000 /files/ENCFF498JMO/ released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF685UUM fastq reads ENCSR764YDL ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR0B1-human ENCAB651SYY DNA False 2018-01-26 ENCODE 2 1 100 paired-ended 1 ENCFF828VUL 3690006967 Michael Snyder, Stanford a48adfbbf266179b534bcc0d8ceb6dd4 https://www.encodeproject.org/files/ENCFF685UUM/@@download/ENCFF685UUM.fastq.gz Illumina HiSeq 4000 /files/ENCFF259GQA/ released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF301KVJ fastq reads ENCSR764YDL ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR0B1-human ENCAB651SYY DNA False 2018-01-26 ENCODE 1 1 100 paired-ended 2 ENCFF460ZWD 2785669428 Michael Snyder, Stanford 0eb5c6a131e91b4a247ad394754b514d https://www.encodeproject.org/files/ENCFF301KVJ/@@download/ENCFF301KVJ.fastq.gz Illumina HiSeq 4000 /files/ENCFF502GTS/ released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF039XRH bam unfiltered alignments ENCSR764YDL ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR0B1-human ENCAB651SYY DNA False 2018-01-26 ENCODE 1 100 ENCFF301KVJ, ENCFF460ZWD, ENCFF807MUK 5307802393 ENCODE Processing Pipeline 6ec730b16d6d42d887902ea300a8622e https://www.encodeproject.org/files/ENCFF039XRH/@@download/ENCFF039XRH.bam hg19 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF563EPX bam unfiltered alignments ENCSR764YDL ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR0B1-human ENCAB651SYY DNA False 2018-01-26 ENCODE 2 100 ENCFF643CGH, ENCFF685UUM, ENCFF828VUL 7354331570 ENCODE Processing Pipeline 0fd804999d0081eada1343de5eb72466 https://www.encodeproject.org/files/ENCFF563EPX/@@download/ENCFF563EPX.bam GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF594CSF bam unfiltered alignments ENCSR764YDL ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR0B1-human ENCAB651SYY DNA False 2018-01-26 ENCODE 1 100 ENCFF301KVJ, ENCFF460ZWD, ENCFF643CGH 5310691463 ENCODE Processing Pipeline a616022c9183c2ad0e1a1a8ed3005f49 https://www.encodeproject.org/files/ENCFF594CSF/@@download/ENCFF594CSF.bam GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF458QFF bam unfiltered alignments ENCSR764YDL ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR0B1-human ENCAB651SYY DNA False 2018-01-26 ENCODE 2 100 ENCFF685UUM, ENCFF807MUK, ENCFF828VUL 7349080939 ENCODE Processing Pipeline 16c6e5a34ff5172c2b82e32c67515133 https://www.encodeproject.org/files/ENCFF458QFF/@@download/ENCFF458QFF.bam hg19 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF332BKR bam alignments ENCSR764YDL ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR0B1-human ENCAB651SYY DNA False 2018-01-26 ENCODE 1 100 ENCFF301KVJ, ENCFF460ZWD, ENCFF807MUK 3436153770 ENCODE Processing Pipeline 3e25a796656f49149a84a6f96ccd6806 https://www.encodeproject.org/files/ENCFF332BKR/@@download/ENCFF332BKR.bam hg19 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF822ADN bam alignments ENCSR764YDL ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR0B1-human ENCAB651SYY DNA False 2018-01-26 ENCODE 1 100 ENCFF301KVJ, ENCFF460ZWD, ENCFF643CGH 3438580804 ENCODE Processing Pipeline 9c99666a88586a7aa36d6097af0b4352 https://www.encodeproject.org/files/ENCFF822ADN/@@download/ENCFF822ADN.bam GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF790KLE bam alignments ENCSR764YDL ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR0B1-human ENCAB651SYY DNA False 2018-01-26 ENCODE 2 100 ENCFF643CGH, ENCFF685UUM, ENCFF828VUL 5001589684 ENCODE Processing Pipeline 131ad19bd86dc73b0c596884152f7ef9 https://www.encodeproject.org/files/ENCFF790KLE/@@download/ENCFF790KLE.bam GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF306NYS bam alignments ENCSR764YDL ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR0B1-human ENCAB651SYY DNA False 2018-01-26 ENCODE 2 100 ENCFF685UUM, ENCFF807MUK, ENCFF828VUL 4997391492 ENCODE Processing Pipeline 3ac970829465a08bc3dcf2003b83279c https://www.encodeproject.org/files/ENCFF306NYS/@@download/ENCFF306NYS.bam hg19 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF604SKG bigWig signal p-value ENCSR764YDL ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR0B1-human ENCAB651SYY DNA False 2018-01-26 ENCODE 1 ENCFF160VXC, ENCFF332BKR 991360775 ENCODE Processing Pipeline 4fd75aa51d012445e6bdb94971b8d816 https://www.encodeproject.org/files/ENCFF604SKG/@@download/ENCFF604SKG.bigWig hg19 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF797AJN bigWig signal p-value ENCSR764YDL ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR0B1-human ENCAB651SYY DNA False 2018-01-26 ENCODE 2 ENCFF160VXC, ENCFF306NYS, ENCFF834TUP 1945747487 ENCODE Processing Pipeline 166c76f1cf2e219d744348e615847116 https://www.encodeproject.org/files/ENCFF797AJN/@@download/ENCFF797AJN.bigWig hg19 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF244ECN bigWig signal p-value ENCSR764YDL ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR0B1-human ENCAB651SYY DNA False 2018-01-26 ENCODE 1, 2 ENCFF160VXC, ENCFF306NYS, ENCFF332BKR, ENCFF834TUP 1972740058 ENCODE Processing Pipeline 59ab2eba5055838b71d21685a7eb73a0 https://www.encodeproject.org/files/ENCFF244ECN/@@download/ENCFF244ECN.bigWig hg19 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF056MKY bigWig fold change over control ENCSR764YDL ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR0B1-human ENCAB651SYY DNA False 2018-01-26 ENCODE 1 ENCFF160VXC, ENCFF332BKR 1219801871 ENCODE Processing Pipeline 4b4c882c5e6eb47fb25910e1dd7ce3a2 https://www.encodeproject.org/files/ENCFF056MKY/@@download/ENCFF056MKY.bigWig hg19 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF404PAG bigWig fold change over control ENCSR764YDL ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR0B1-human ENCAB651SYY DNA False 2018-01-26 ENCODE 2 ENCFF160VXC, ENCFF306NYS, ENCFF834TUP 1972858728 ENCODE Processing Pipeline 0e3564035edd04bdc7a4672718348193 https://www.encodeproject.org/files/ENCFF404PAG/@@download/ENCFF404PAG.bigWig hg19 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF259JBX bigWig fold change over control ENCSR764YDL ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR0B1-human ENCAB651SYY DNA False 2018-01-26 ENCODE 1, 2 ENCFF160VXC, ENCFF306NYS, ENCFF332BKR, ENCFF834TUP 2363794254 ENCODE Processing Pipeline 0f7a19971ce4277271490c9faf7929c3 https://www.encodeproject.org/files/ENCFF259JBX/@@download/ENCFF259JBX.bigWig hg19 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF040DDO bigBed narrowPeak peaks ENCSR764YDL ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR0B1-human ENCAB651SYY DNA False 2018-01-26 ENCODE 1, 2 ENCFF179GKP 8720456 ENCODE Processing Pipeline b044945aa8276e88ee8d9f3ea3460b8a https://www.encodeproject.org/files/ENCFF040DDO/@@download/ENCFF040DDO.bigBed hg19 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF531NQP bed narrowPeak peaks ENCSR764YDL ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR0B1-human ENCAB651SYY DNA False 2018-01-26 ENCODE 2 ENCFF160VXC, ENCFF306NYS, ENCFF834TUP 5971548 ENCODE Processing Pipeline 8e9c11a2ca840a085432e43460da5b42 https://www.encodeproject.org/files/ENCFF531NQP/@@download/ENCFF531NQP.bed.gz hg19 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF562QRM bigBed narrowPeak peaks ENCSR764YDL ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR0B1-human ENCAB651SYY DNA False 2018-01-26 ENCODE 1 ENCFF464TJB 8799519 ENCODE Processing Pipeline 9d862adcdb639a8a03076be19b057024 https://www.encodeproject.org/files/ENCFF562QRM/@@download/ENCFF562QRM.bigBed hg19 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF987VYV bigBed narrowPeak peaks ENCSR764YDL ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR0B1-human ENCAB651SYY DNA False 2018-01-26 ENCODE 2 ENCFF531NQP 9639435 ENCODE Processing Pipeline d1d531d42e8074cdbcd27707fcb56838 https://www.encodeproject.org/files/ENCFF987VYV/@@download/ENCFF987VYV.bigBed hg19 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF146NUZ bigBed narrowPeak conservative idr thresholded peaks ENCSR764YDL ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR0B1-human ENCAB651SYY DNA False 2018-01-26 ENCODE 1, 2 ENCFF824TGC 69629 ENCODE Processing Pipeline 265837f498ecdfff9f1652d2d0d26fe3 https://www.encodeproject.org/files/ENCFF146NUZ/@@download/ENCFF146NUZ.bigBed hg19 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF954NAJ bed narrowPeak optimal idr thresholded peaks ENCSR764YDL ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR0B1-human ENCAB651SYY DNA False 2018-01-26 ENCODE 1, 2 ENCFF001TDO, ENCFF179GKP, ENCFF464TJB, ENCFF531NQP 7023 ENCODE Processing Pipeline bdc0541201594ebca82f7ad5c31c2cdc https://www.encodeproject.org/files/ENCFF954NAJ/@@download/ENCFF954NAJ.bed.gz hg19 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF464TJB bed narrowPeak peaks ENCSR764YDL ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR0B1-human ENCAB651SYY DNA False 2018-01-26 ENCODE 1 ENCFF160VXC, ENCFF332BKR 4994184 ENCODE Processing Pipeline 9aa45d482c71c8760087f0b0d9a92608 https://www.encodeproject.org/files/ENCFF464TJB/@@download/ENCFF464TJB.bed.gz hg19 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF179GKP bed narrowPeak peaks ENCSR764YDL ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR0B1-human ENCAB651SYY DNA False 2018-01-26 ENCODE 1, 2 ENCFF160VXC, ENCFF306NYS, ENCFF332BKR, ENCFF834TUP 5541417 ENCODE Processing Pipeline 3040756355eed6d7cb0ef786f7059b79 https://www.encodeproject.org/files/ENCFF179GKP/@@download/ENCFF179GKP.bed.gz hg19 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF824TGC bed narrowPeak conservative idr thresholded peaks ENCSR764YDL ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR0B1-human ENCAB651SYY DNA False 2018-01-26 ENCODE 1, 2 ENCFF001TDO, ENCFF179GKP, ENCFF464TJB, ENCFF531NQP 3429 ENCODE Processing Pipeline 0854a647f788aa4a872d8333e25615ab https://www.encodeproject.org/files/ENCFF824TGC/@@download/ENCFF824TGC.bed.gz hg19 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF788ODW bigBed narrowPeak optimal idr thresholded peaks ENCSR764YDL ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR0B1-human ENCAB651SYY DNA False 2018-01-26 ENCODE 1, 2 ENCFF954NAJ 70458 ENCODE Processing Pipeline 8da9314e7aa75d134546fa24994f6211 https://www.encodeproject.org/files/ENCFF788ODW/@@download/ENCFF788ODW.bigBed hg19 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF767TOY bigWig signal p-value ENCSR764YDL ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR0B1-human ENCAB651SYY DNA False 2018-01-26 ENCODE 1 ENCFF822ADN 1176720654 ENCODE Processing Pipeline 8b6d35e4c8d08268fd7c526948dc2c80 https://www.encodeproject.org/files/ENCFF767TOY/@@download/ENCFF767TOY.bigWig GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF481LEW bigWig signal p-value ENCSR764YDL ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR0B1-human ENCAB651SYY DNA False 2018-01-26 ENCODE 2 ENCFF790KLE 1750078696 ENCODE Processing Pipeline 9173b14d974a94e54ecefd5c5b991ff0 https://www.encodeproject.org/files/ENCFF481LEW/@@download/ENCFF481LEW.bigWig GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF582KRW bigWig fold change over control ENCSR764YDL ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR0B1-human ENCAB651SYY DNA False 2018-01-26 ENCODE 1 ENCFF822ADN 1216906846 ENCODE Processing Pipeline 349190178b027a594f6efd49ba609c0a https://www.encodeproject.org/files/ENCFF582KRW/@@download/ENCFF582KRW.bigWig GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF234NNZ bigWig signal p-value ENCSR764YDL ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR0B1-human ENCAB651SYY DNA False 2018-01-26 ENCODE 1, 2 ENCFF790KLE, ENCFF822ADN 2118919641 ENCODE Processing Pipeline 77d4c43b903eb5a5d7ce8ffb95bc2d59 https://www.encodeproject.org/files/ENCFF234NNZ/@@download/ENCFF234NNZ.bigWig GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF763NZJ bigWig fold change over control ENCSR764YDL ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR0B1-human ENCAB651SYY DNA False 2018-01-26 ENCODE 2 ENCFF790KLE 1981462371 ENCODE Processing Pipeline f1515bffe47e9ece3495549534876bc5 https://www.encodeproject.org/files/ENCFF763NZJ/@@download/ENCFF763NZJ.bigWig GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF661MCI bigWig fold change over control ENCSR764YDL ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR0B1-human ENCAB651SYY DNA False 2018-01-26 ENCODE 1, 2 ENCFF790KLE, ENCFF822ADN 2367636495 ENCODE Processing Pipeline 6724246159ff3f74eecd83f6813d0f9b https://www.encodeproject.org/files/ENCFF661MCI/@@download/ENCFF661MCI.bigWig GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF131FBO bed narrowPeak peaks ENCSR764YDL ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR0B1-human ENCAB651SYY DNA False 2018-01-26 ENCODE 1, 2 ENCFF790KLE, ENCFF822ADN 7182722 ENCODE Processing Pipeline f9b518c92cd33fd8dea0b1451d5085ee https://www.encodeproject.org/files/ENCFF131FBO/@@download/ENCFF131FBO.bed.gz GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF043LXN bigBed narrowPeak peaks ENCSR764YDL ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR0B1-human ENCAB651SYY DNA False 2018-01-26 ENCODE 1, 2 ENCFF131FBO 10878717 ENCODE Processing Pipeline b76bf6ecdfa0faa4635d48ca92255938 https://www.encodeproject.org/files/ENCFF043LXN/@@download/ENCFF043LXN.bigBed GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF104CDG bed narrowPeak peaks ENCSR764YDL ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR0B1-human ENCAB651SYY DNA False 2018-01-26 ENCODE 1 ENCFF822ADN 6285365 ENCODE Processing Pipeline 6a95b7ab135d4da4c0ed0916f9251804 https://www.encodeproject.org/files/ENCFF104CDG/@@download/ENCFF104CDG.bed.gz GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF647TNF bed narrowPeak peaks ENCSR764YDL ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR0B1-human ENCAB651SYY DNA False 2018-01-26 ENCODE 2 ENCFF790KLE 6963208 ENCODE Processing Pipeline f8ecd1ebcd603ef761280ee153142ec1 https://www.encodeproject.org/files/ENCFF647TNF/@@download/ENCFF647TNF.bed.gz GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF113PCQ bigBed narrowPeak peaks ENCSR764YDL ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR0B1-human ENCAB651SYY DNA False 2018-01-26 ENCODE 1 ENCFF104CDG 11047753 ENCODE Processing Pipeline 9a26488ff871a7835bee08c75777ed8b https://www.encodeproject.org/files/ENCFF113PCQ/@@download/ENCFF113PCQ.bigBed GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF460EQX bed narrowPeak conservative idr thresholded peaks ENCSR764YDL ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR0B1-human ENCAB651SYY DNA False 2018-01-26 ENCODE 1, 2 ENCFF104CDG, ENCFF131FBO, ENCFF419RSJ, ENCFF647TNF 3576 ENCODE Processing Pipeline f5508bb826e9301a09378a7b979aa551 https://www.encodeproject.org/files/ENCFF460EQX/@@download/ENCFF460EQX.bed.gz GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF305OOU bed narrowPeak optimal idr thresholded peaks ENCSR764YDL ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR0B1-human ENCAB651SYY DNA False 2018-01-26 ENCODE 1, 2 ENCFF104CDG, ENCFF131FBO, ENCFF419RSJ, ENCFF647TNF 7864 ENCODE Processing Pipeline 30431117f6219609c90d541f738aee29 https://www.encodeproject.org/files/ENCFF305OOU/@@download/ENCFF305OOU.bed.gz GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF645KBB bigBed narrowPeak peaks ENCSR764YDL ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR0B1-human ENCAB651SYY DNA False 2018-01-26 ENCODE 2 ENCFF647TNF 10966340 ENCODE Processing Pipeline 3d4491180a4b67efdfd53bf9c2290c62 https://www.encodeproject.org/files/ENCFF645KBB/@@download/ENCFF645KBB.bigBed GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF217BKJ bigBed narrowPeak conservative idr thresholded peaks ENCSR764YDL ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR0B1-human ENCAB651SYY DNA False 2018-01-26 ENCODE 1, 2 ENCFF460EQX 86492 ENCODE Processing Pipeline 0316b51c24b162ff4f32dcb8cac282c5 https://www.encodeproject.org/files/ENCFF217BKJ/@@download/ENCFF217BKJ.bigBed GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF566EUN bigBed narrowPeak optimal idr thresholded peaks ENCSR764YDL ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR0B1-human ENCAB651SYY DNA False 2018-01-26 ENCODE 1, 2 ENCFF305OOU 82358 ENCODE Processing Pipeline a62c696155b75ac791c52722f02b2975 https://www.encodeproject.org/files/ENCFF566EUN/@@download/ENCFF566EUN.bigBed GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF000QBV bam alignments ENCSR000BNV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MEF2A-human ENCAB000AIQ DNA see document see document False 2011-07-18 ENCODE 1 ENCFF000QCH 929318144 Richard Myers, HAIB 1ac6a90d503c9f43ffacc3e89cef2018 https://www.encodeproject.org/files/ENCFF000QBV/@@download/ENCFF000QBV.bam hg19 archived low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth missing control alignments ENCFF000QBW bigBed broadPeak peaks ENCSR000BNV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MEF2A-human ENCAB000AIQ DNA see document see document False 2011-07-18 ENCODE 1 1 ENCFF001UKJ 147644 Richard Myers, HAIB 50a8b82b5b28db9a749615a33e5ead74 https://www.encodeproject.org/files/ENCFF000QBW/@@download/ENCFF000QBW.bigBed hg19 archived low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth missing control alignments ENCFF000QBX bigBed broadPeak peaks ENCSR000BNV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MEF2A-human ENCAB000AIQ DNA see document see document False 2011-07-18 ENCODE 2 1 ENCFF001UKK 99120 Richard Myers, HAIB 3eeae5cbd93a9f12899496e575ae11a5 https://www.encodeproject.org/files/ENCFF000QBX/@@download/ENCFF000QBX.bigBed hg19 archived low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth missing control alignments ENCFF000QBY bam alignments ENCSR000BNV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MEF2A-human ENCAB000AIQ DNA see document see document False 2011-07-18 ENCODE 2 ENCFF000QCI 939378828 Richard Myers, HAIB a266c60190e675da7486c198fb399731 https://www.encodeproject.org/files/ENCFF000QBY/@@download/ENCFF000QBY.bam hg19 archived low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth missing control alignments ENCFF000QCA bigWig raw signal ENCSR000BNV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MEF2A-human ENCAB000AIQ DNA see document see document False 2011-07-18 ENCODE 1 1 9471778 Richard Myers, HAIB 1eecece538266147deeccdbb6b97b2b1 https://www.encodeproject.org/files/ENCFF000QCA/@@download/ENCFF000QCA.bigWig hg19 archived low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample, missing derived_from control insufficient read depth missing control alignments ENCFF000QCB bigWig raw signal ENCSR000BNV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MEF2A-human ENCAB000AIQ DNA see document see document False 2011-07-18 ENCODE 2 1 14353153 Richard Myers, HAIB 4ee965248ae40abc2a102298abaf37b5 https://www.encodeproject.org/files/ENCFF000QCB/@@download/ENCFF000QCB.bigWig hg19 archived low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample, missing derived_from control insufficient read depth missing control alignments ENCFF000QCH fastq reads ENCSR000BNV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MEF2A-human ENCAB000AIQ DNA see document see document False 2011-07-18 ENCODE 1 1 36 single-ended 803468681 Richard Myers, HAIB 1fe2435122aa9395cf49bdc61c49a2ed https://www.encodeproject.org/files/ENCFF000QCH/@@download/ENCFF000QCH.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000QEX/ released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth missing control alignments ENCFF000QCI fastq reads ENCSR000BNV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MEF2A-human ENCAB000AIQ DNA see document see document False 2011-07-18 ENCODE 2 1 36 single-ended 927569797 Richard Myers, HAIB fd076189e618f7512b0bd0a4bbaf437c https://www.encodeproject.org/files/ENCFF000QCI/@@download/ENCFF000QCI.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000QEX/ released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth missing control alignments ENCFF001UKJ bed broadPeak peaks ENCSR000BNV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MEF2A-human ENCAB000AIQ DNA see document see document False 2011-07-18 ENCODE 1 1 54276 Richard Myers, HAIB 385c3b1e1b57faeff565b0cebb7e4638 https://www.encodeproject.org/files/ENCFF001UKJ/@@download/ENCFF001UKJ.bed.gz hg19 archived low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample, missing derived_from control insufficient read depth missing control alignments ENCFF001UKK bed broadPeak peaks ENCSR000BNV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MEF2A-human ENCAB000AIQ DNA see document see document False 2011-07-18 ENCODE 2 1 36858 Richard Myers, HAIB 065c8bd750bdd207882bb6023e2930d1 https://www.encodeproject.org/files/ENCFF001UKK/@@download/ENCFF001UKK.bed.gz hg19 archived low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample, missing derived_from control insufficient read depth missing control alignments ENCFF002CMD bed narrowPeak optimal idr thresholded peaks ENCSR000BNV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MEF2A-human ENCAB000AIQ DNA see document see document False 2011-07-18 ENCODE 131373 ENCODE Consortium Analysis Working Group 86f7faf8431745bababf549e8455935e https://www.encodeproject.org/files/ENCFF002CMD/@@download/ENCFF002CMD.bed.gz hg19 archived low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample, missing derived_from control insufficient read depth missing control alignments ENCFF874UPP bigBed narrowPeak optimal idr thresholded peaks ENCSR000BNV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MEF2A-human ENCAB000AIQ DNA see document see document False 2011-07-18 ENCODE ENCFF002CMD 316067 ENCODE Consortium d1c17137874e0c15d5eeed78f7661eca https://www.encodeproject.org/files/ENCFF874UPP/@@download/ENCFF874UPP.bigBed hg19 archived low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth missing control alignments ENCFF913CDO bam unfiltered alignments ENCSR000BNV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MEF2A-human ENCAB000AIQ DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000QCH, ENCFF643CGH 1138271473 ENCODE Processing Pipeline c250dfe5e897156f62be16b1e396cd2b https://www.encodeproject.org/files/ENCFF913CDO/@@download/ENCFF913CDO.bam GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth missing control alignments ENCFF850FRG bam alignments ENCSR000BNV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MEF2A-human ENCAB000AIQ DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000QCI, ENCFF643CGH 552219646 ENCODE Processing Pipeline 0dc27eaceb709b62302b71dc68fa45a6 https://www.encodeproject.org/files/ENCFF850FRG/@@download/ENCFF850FRG.bam GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth missing control alignments ENCFF401BQM bam alignments ENCSR000BNV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MEF2A-human ENCAB000AIQ DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000QCH, ENCFF643CGH 670034925 ENCODE Processing Pipeline 8c1cd145a568534df20e1a7f327813fa https://www.encodeproject.org/files/ENCFF401BQM/@@download/ENCFF401BQM.bam GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth missing control alignments ENCFF573SUC bam unfiltered alignments ENCSR000BNV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MEF2A-human ENCAB000AIQ DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000QCI, ENCFF643CGH 1118480056 ENCODE Processing Pipeline cc91354d82562aa351232eecf99b6dda https://www.encodeproject.org/files/ENCFF573SUC/@@download/ENCFF573SUC.bam GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth missing control alignments ENCFF773RUT bam unfiltered alignments ENCSR000BNV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MEF2A-human ENCAB000AIQ DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000QCI, ENCFF807MUK 1116294733 ENCODE Processing Pipeline a0256c6b2cf63603cfcfd82a5f84a59a https://www.encodeproject.org/files/ENCFF773RUT/@@download/ENCFF773RUT.bam hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth missing control alignments ENCFF037JQU bam alignments ENCSR000BNV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MEF2A-human ENCAB000AIQ DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000QCI, ENCFF807MUK 552548472 ENCODE Processing Pipeline d0955d8d02d49f9673794d0d352e6997 https://www.encodeproject.org/files/ENCFF037JQU/@@download/ENCFF037JQU.bam hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth missing control alignments ENCFF700OGN bam alignments ENCSR000BNV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MEF2A-human ENCAB000AIQ DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000QCH, ENCFF807MUK 670422920 ENCODE Processing Pipeline cfe483c267d3277c8da141e6e9d022bf https://www.encodeproject.org/files/ENCFF700OGN/@@download/ENCFF700OGN.bam hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth missing control alignments ENCFF893HCG bam unfiltered alignments ENCSR000BNV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MEF2A-human ENCAB000AIQ DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000QCH, ENCFF807MUK 1134640809 ENCODE Processing Pipeline e94d259dc7c64cee03689126a6101300 https://www.encodeproject.org/files/ENCFF893HCG/@@download/ENCFF893HCG.bam hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth missing control alignments ENCFF669MIP bigWig signal p-value ENCSR000BNV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MEF2A-human ENCAB000AIQ DNA see document see document False 2011-07-18 ENCODE 1 ENCFF401BQM 187738185 ENCODE Processing Pipeline 2602fc6813343908f10750826b7a1527 https://www.encodeproject.org/files/ENCFF669MIP/@@download/ENCFF669MIP.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth missing control alignments ENCFF852UFU bigWig signal p-value ENCSR000BNV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MEF2A-human ENCAB000AIQ DNA see document see document False 2011-07-18 ENCODE 2 ENCFF850FRG 207220442 ENCODE Processing Pipeline 82c62e018d0a3feeb8424ec8d450cccd https://www.encodeproject.org/files/ENCFF852UFU/@@download/ENCFF852UFU.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth missing control alignments ENCFF103BUT bigWig signal p-value ENCSR000BNV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MEF2A-human ENCAB000AIQ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF401BQM, ENCFF850FRG 193232655 ENCODE Processing Pipeline 1c2cd14e575898deecbc30b7efcc715b https://www.encodeproject.org/files/ENCFF103BUT/@@download/ENCFF103BUT.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth missing control alignments ENCFF086VZQ bigWig fold change over control ENCSR000BNV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MEF2A-human ENCAB000AIQ DNA see document see document False 2011-07-18 ENCODE 1 ENCFF401BQM 288713465 ENCODE Processing Pipeline 7c60db026e7034a2a9838707cd5689d5 https://www.encodeproject.org/files/ENCFF086VZQ/@@download/ENCFF086VZQ.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth missing control alignments ENCFF396TQD bigWig fold change over control ENCSR000BNV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MEF2A-human ENCAB000AIQ DNA see document see document False 2011-07-18 ENCODE 2 ENCFF850FRG 215926903 ENCODE Processing Pipeline fa6092b4a63572b7db120689f6b112c4 https://www.encodeproject.org/files/ENCFF396TQD/@@download/ENCFF396TQD.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth missing control alignments ENCFF072MKT bigWig fold change over control ENCSR000BNV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MEF2A-human ENCAB000AIQ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF401BQM, ENCFF850FRG 457373805 ENCODE Processing Pipeline d2212d8930210ac63e01cd7f5d7079c6 https://www.encodeproject.org/files/ENCFF072MKT/@@download/ENCFF072MKT.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth missing control alignments ENCFF862SVA bed narrowPeak peaks ENCSR000BNV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MEF2A-human ENCAB000AIQ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF401BQM, ENCFF850FRG 4334858 ENCODE Processing Pipeline 3498eb36e5e5745bbec797ed1ea4320d https://www.encodeproject.org/files/ENCFF862SVA/@@download/ENCFF862SVA.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth missing control alignments ENCFF190IHG bed narrowPeak conservative idr thresholded peaks ENCSR000BNV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MEF2A-human ENCAB000AIQ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF184QHH, ENCFF419RSJ, ENCFF862SVA, ENCFF894NFM 16950 ENCODE Processing Pipeline 15ab24e07bb44b0eb0172d59308cb5f2 https://www.encodeproject.org/files/ENCFF190IHG/@@download/ENCFF190IHG.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth missing control alignments ENCFF184QHH bed narrowPeak peaks ENCSR000BNV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MEF2A-human ENCAB000AIQ DNA see document see document False 2011-07-18 ENCODE 2 ENCFF850FRG 178380 ENCODE Processing Pipeline d35d70f9aa74853e1f345537054d9f28 https://www.encodeproject.org/files/ENCFF184QHH/@@download/ENCFF184QHH.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth missing control alignments ENCFF894NFM bed narrowPeak peaks ENCSR000BNV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MEF2A-human ENCAB000AIQ DNA see document see document False 2011-07-18 ENCODE 1 ENCFF401BQM 128973 ENCODE Processing Pipeline 4b35f34c99006cc3973d8555e0f4eed1 https://www.encodeproject.org/files/ENCFF894NFM/@@download/ENCFF894NFM.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth missing control alignments ENCFF103BVY bigBed narrowPeak peaks ENCSR000BNV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MEF2A-human ENCAB000AIQ DNA see document see document False 2011-07-18 ENCODE 1 ENCFF894NFM 294515 ENCODE Processing Pipeline 73105cb88df513d1e79bae74c1c8c7b4 https://www.encodeproject.org/files/ENCFF103BVY/@@download/ENCFF103BVY.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth missing control alignments ENCFF950NDS bigBed narrowPeak peaks ENCSR000BNV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MEF2A-human ENCAB000AIQ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF862SVA 10533388 ENCODE Processing Pipeline 1c88f0cb444c80504e8a1ebe746ab353 https://www.encodeproject.org/files/ENCFF950NDS/@@download/ENCFF950NDS.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth missing control alignments ENCFF481IRF bigBed narrowPeak conservative idr thresholded peaks ENCSR000BNV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MEF2A-human ENCAB000AIQ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF190IHG 66789 ENCODE Processing Pipeline 91b1c06771934e0dbc76d1083470f0b3 https://www.encodeproject.org/files/ENCFF481IRF/@@download/ENCFF481IRF.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth missing control alignments ENCFF556HYW bigBed narrowPeak optimal idr thresholded peaks ENCSR000BNV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MEF2A-human ENCAB000AIQ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF310SMW 89335 ENCODE Processing Pipeline f3a4e4678d20c1c250659a3b0f208f97 https://www.encodeproject.org/files/ENCFF556HYW/@@download/ENCFF556HYW.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth missing control alignments ENCFF310SMW bed narrowPeak optimal idr thresholded peaks ENCSR000BNV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MEF2A-human ENCAB000AIQ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF184QHH, ENCFF419RSJ, ENCFF862SVA, ENCFF894NFM 23534 ENCODE Processing Pipeline e967915ab5610d1d6ed4def309ca49c1 https://www.encodeproject.org/files/ENCFF310SMW/@@download/ENCFF310SMW.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth missing control alignments ENCFF177RIM bigBed narrowPeak peaks ENCSR000BNV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MEF2A-human ENCAB000AIQ DNA see document see document False 2011-07-18 ENCODE 2 ENCFF184QHH 452850 ENCODE Processing Pipeline e63c082da332c38b93a5a7d625308427 https://www.encodeproject.org/files/ENCFF177RIM/@@download/ENCFF177RIM.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth missing control alignments ENCFF057ZQD bigWig signal p-value ENCSR000BNV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MEF2A-human ENCAB000AIQ DNA see document see document False 2011-07-18 ENCODE 1 ENCFF700OGN, ENCFF750MIM 186963219 ENCODE Processing Pipeline 5e02b06548d90f2a9c5ace3789c59adc https://www.encodeproject.org/files/ENCFF057ZQD/@@download/ENCFF057ZQD.bigWig hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth missing control alignments ENCFF329OJL bigWig fold change over control ENCSR000BNV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MEF2A-human ENCAB000AIQ DNA see document see document False 2011-07-18 ENCODE 1 ENCFF700OGN, ENCFF750MIM 286534797 ENCODE Processing Pipeline f7d02bfce136b436ab7adb9a74d1cf70 https://www.encodeproject.org/files/ENCFF329OJL/@@download/ENCFF329OJL.bigWig hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth missing control alignments ENCFF730JPK bigWig signal p-value ENCSR000BNV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MEF2A-human ENCAB000AIQ DNA see document see document False 2011-07-18 ENCODE 2 ENCFF037JQU, ENCFF750MIM 207419607 ENCODE Processing Pipeline f034b0451aa241dccd0eaf70a0422397 https://www.encodeproject.org/files/ENCFF730JPK/@@download/ENCFF730JPK.bigWig hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth missing control alignments ENCFF333ZWG bigWig signal p-value ENCSR000BNV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MEF2A-human ENCAB000AIQ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF037JQU, ENCFF700OGN, ENCFF750MIM 193318398 ENCODE Processing Pipeline f9c69f8ed33fe5cad7eed6bf76f1a314 https://www.encodeproject.org/files/ENCFF333ZWG/@@download/ENCFF333ZWG.bigWig hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth missing control alignments ENCFF329GXM bigWig fold change over control ENCSR000BNV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MEF2A-human ENCAB000AIQ DNA see document see document False 2011-07-18 ENCODE 2 ENCFF037JQU, ENCFF750MIM 217714812 ENCODE Processing Pipeline 36a1126159b5a91233f743eefd8953ec https://www.encodeproject.org/files/ENCFF329GXM/@@download/ENCFF329GXM.bigWig hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth missing control alignments ENCFF479KSD bigWig fold change over control ENCSR000BNV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MEF2A-human ENCAB000AIQ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF037JQU, ENCFF700OGN, ENCFF750MIM 451171444 ENCODE Processing Pipeline a77ab3a94abea1f473481d1aee61b500 https://www.encodeproject.org/files/ENCFF479KSD/@@download/ENCFF479KSD.bigWig hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth missing control alignments ENCFF825VQR bed narrowPeak peaks ENCSR000BNV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MEF2A-human ENCAB000AIQ DNA see document see document False 2011-07-18 ENCODE 2 ENCFF037JQU, ENCFF750MIM 179486 ENCODE Processing Pipeline 8c675139cf606e34fb00e7098b1ea42c https://www.encodeproject.org/files/ENCFF825VQR/@@download/ENCFF825VQR.bed.gz hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth missing control alignments ENCFF269FHI bigBed narrowPeak peaks ENCSR000BNV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MEF2A-human ENCAB000AIQ DNA see document see document False 2011-07-18 ENCODE 1 ENCFF307TQZ 292225 ENCODE Processing Pipeline facfaee3fd94e2dfe33564097859e563 https://www.encodeproject.org/files/ENCFF269FHI/@@download/ENCFF269FHI.bigBed hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth missing control alignments ENCFF082RRJ bigBed narrowPeak peaks ENCSR000BNV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MEF2A-human ENCAB000AIQ DNA see document see document False 2011-07-18 ENCODE 2 ENCFF825VQR 454066 ENCODE Processing Pipeline d93b95c63759f944213a83f2b8b2acdd https://www.encodeproject.org/files/ENCFF082RRJ/@@download/ENCFF082RRJ.bigBed hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth missing control alignments ENCFF307TQZ bed narrowPeak peaks ENCSR000BNV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MEF2A-human ENCAB000AIQ DNA see document see document False 2011-07-18 ENCODE 1 ENCFF700OGN, ENCFF750MIM 128509 ENCODE Processing Pipeline 29ba80eee0d97892a5028bf68567ac0b https://www.encodeproject.org/files/ENCFF307TQZ/@@download/ENCFF307TQZ.bed.gz hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth missing control alignments ENCFF435ESC bed narrowPeak peaks ENCSR000BNV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MEF2A-human ENCAB000AIQ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF037JQU, ENCFF700OGN, ENCFF750MIM 4339920 ENCODE Processing Pipeline 2262ccbae76d8f3fcc105a8e59e93911 https://www.encodeproject.org/files/ENCFF435ESC/@@download/ENCFF435ESC.bed.gz hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth missing control alignments ENCFF701ZYD bigBed narrowPeak conservative idr thresholded peaks ENCSR000BNV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MEF2A-human ENCAB000AIQ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF883WDT 66753 ENCODE Processing Pipeline 1132b3bd5fc51702b223d7c0d033b1ce https://www.encodeproject.org/files/ENCFF701ZYD/@@download/ENCFF701ZYD.bigBed hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth missing control alignments ENCFF883WDT bed narrowPeak conservative idr thresholded peaks ENCSR000BNV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MEF2A-human ENCAB000AIQ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF001TDO, ENCFF307TQZ, ENCFF435ESC, ENCFF825VQR 16910 ENCODE Processing Pipeline 792386b776d61ff1646a09cc172ca8a1 https://www.encodeproject.org/files/ENCFF883WDT/@@download/ENCFF883WDT.bed.gz hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth missing control alignments ENCFF577UJR bed narrowPeak optimal idr thresholded peaks ENCSR000BNV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MEF2A-human ENCAB000AIQ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF001TDO, ENCFF307TQZ, ENCFF435ESC, ENCFF825VQR 22863 ENCODE Processing Pipeline 5e9c735464c7e63dba6ce09405a9eec0 https://www.encodeproject.org/files/ENCFF577UJR/@@download/ENCFF577UJR.bed.gz hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth missing control alignments ENCFF910ECQ bigBed narrowPeak peaks ENCSR000BNV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MEF2A-human ENCAB000AIQ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF435ESC 10532812 ENCODE Processing Pipeline b8571e8ea7d637e0a54ef3e9d4a97d70 https://www.encodeproject.org/files/ENCFF910ECQ/@@download/ENCFF910ECQ.bigBed hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth missing control alignments ENCFF182PJZ bigBed narrowPeak optimal idr thresholded peaks ENCSR000BNV ChIP-seq EFO:0002067 K562 cell line Homo sapiens MEF2A-human ENCAB000AIQ DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF577UJR 88320 ENCODE Processing Pipeline 4738c1da3804eefad96175e740ec3893 https://www.encodeproject.org/files/ENCFF182PJZ/@@download/ENCFF182PJZ.bigBed hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample control insufficient read depth missing control alignments ENCFF231TGV fastq reads ENCSR223MLH ChIP-seq EFO:0002067 K562 cell line Homo sapiens BRCA1-human ENCAB125OWA DNA False 2017-05-18 ENCODE 1 1 100 paired-ended 2 ENCFF276RGL 2975823740 Michael Snyder, Stanford 000deb751bef15e47400877e17d3534f SRA:SRR6212872 https://www.encodeproject.org/files/ENCFF231TGV/@@download/ENCFF231TGV.fastq.gz Illumina HiSeq 4000 /files/ENCFF502GTS/ released borderline replicate concordance, mild to moderate bottlenecking ENCFF276RGL fastq reads ENCSR223MLH ChIP-seq EFO:0002067 K562 cell line Homo sapiens BRCA1-human ENCAB125OWA DNA False 2017-05-18 ENCODE 1 1 100 paired-ended 1 ENCFF231TGV 2745062703 Michael Snyder, Stanford b54e04eb62ca7067f55a927fc1007a7b SRA:SRR6212872 https://www.encodeproject.org/files/ENCFF276RGL/@@download/ENCFF276RGL.fastq.gz Illumina HiSeq 4000 /files/ENCFF498JMO/ released borderline replicate concordance, mild to moderate bottlenecking ENCFF576EVC fastq reads ENCSR223MLH ChIP-seq EFO:0002067 K562 cell line Homo sapiens BRCA1-human ENCAB125OWA DNA False 2017-05-18 ENCODE 2 1 100 paired-ended 1 ENCFF805AVF 2661553577 Michael Snyder, Stanford 87980fc8d4b5be18a4585f33e6309523 SRA:SRR6212873 https://www.encodeproject.org/files/ENCFF576EVC/@@download/ENCFF576EVC.fastq.gz Illumina HiSeq 4000 /files/ENCFF259GQA/ released borderline replicate concordance, mild to moderate bottlenecking ENCFF805AVF fastq reads ENCSR223MLH ChIP-seq EFO:0002067 K562 cell line Homo sapiens BRCA1-human ENCAB125OWA DNA False 2017-05-18 ENCODE 2 1 100 paired-ended 2 ENCFF576EVC 2906354365 Michael Snyder, Stanford 8061cfe2e0da160de30acb8ecee2541b SRA:SRR6212873 https://www.encodeproject.org/files/ENCFF805AVF/@@download/ENCFF805AVF.fastq.gz Illumina HiSeq 4000 /files/ENCFF837MIV/ released borderline replicate concordance, mild to moderate bottlenecking ENCFF757YKP bam unfiltered alignments ENCSR223MLH ChIP-seq EFO:0002067 K562 cell line Homo sapiens BRCA1-human ENCAB125OWA DNA False 2017-05-18 ENCODE 2 100 ENCFF576EVC, ENCFF805AVF, ENCFF807MUK 5384457610 ENCODE Processing Pipeline 95c34459cf9b867325fa46f8575326b6 https://www.encodeproject.org/files/ENCFF757YKP/@@download/ENCFF757YKP.bam hg19 released borderline replicate concordance, mild to moderate bottlenecking ENCFF672AOG bam unfiltered alignments ENCSR223MLH ChIP-seq EFO:0002067 K562 cell line Homo sapiens BRCA1-human ENCAB125OWA DNA False 2017-05-18 ENCODE 1 100 ENCFF231TGV, ENCFF276RGL, ENCFF807MUK 5625689376 ENCODE Processing Pipeline be5584b1c7091613d9deb2c099884876 https://www.encodeproject.org/files/ENCFF672AOG/@@download/ENCFF672AOG.bam hg19 released borderline replicate concordance, mild to moderate bottlenecking ENCFF927PKK bam alignments ENCSR223MLH ChIP-seq EFO:0002067 K562 cell line Homo sapiens BRCA1-human ENCAB125OWA DNA False 2017-05-18 ENCODE 2 100 ENCFF576EVC, ENCFF805AVF, ENCFF807MUK 3844588516 ENCODE Processing Pipeline fa33526f8aa55345a67204b8f8dcbc9b https://www.encodeproject.org/files/ENCFF927PKK/@@download/ENCFF927PKK.bam hg19 released borderline replicate concordance, mild to moderate bottlenecking ENCFF593YDQ bam alignments ENCSR223MLH ChIP-seq EFO:0002067 K562 cell line Homo sapiens BRCA1-human ENCAB125OWA DNA False 2017-05-18 ENCODE 1 100 ENCFF231TGV, ENCFF276RGL, ENCFF807MUK 4283040091 ENCODE Processing Pipeline a942f1b8451bd8f935549f17f7bc455a https://www.encodeproject.org/files/ENCFF593YDQ/@@download/ENCFF593YDQ.bam hg19 released borderline replicate concordance, mild to moderate bottlenecking ENCFF496FJD bam unfiltered alignments ENCSR223MLH ChIP-seq EFO:0002067 K562 cell line Homo sapiens BRCA1-human ENCAB125OWA DNA False 2017-05-18 ENCODE 2 100 ENCFF576EVC, ENCFF643CGH, ENCFF805AVF 5391403445 ENCODE Processing Pipeline c9a303624fc07ea01ed2c409559c09c5 https://www.encodeproject.org/files/ENCFF496FJD/@@download/ENCFF496FJD.bam GRCh38 released borderline replicate concordance, mild to moderate bottlenecking ENCFF110TPP bam unfiltered alignments ENCSR223MLH ChIP-seq EFO:0002067 K562 cell line Homo sapiens BRCA1-human ENCAB125OWA DNA False 2017-05-18 ENCODE 1 100 ENCFF231TGV, ENCFF276RGL, ENCFF643CGH 5633480345 ENCODE Processing Pipeline a5b43168ce30685ae36148cb1afdd4a2 https://www.encodeproject.org/files/ENCFF110TPP/@@download/ENCFF110TPP.bam GRCh38 released borderline replicate concordance, mild to moderate bottlenecking ENCFF490YME bam alignments ENCSR223MLH ChIP-seq EFO:0002067 K562 cell line Homo sapiens BRCA1-human ENCAB125OWA DNA False 2017-05-18 ENCODE 2 100 ENCFF576EVC, ENCFF643CGH, ENCFF805AVF 3850107825 ENCODE Processing Pipeline 343bd0ea3e844af012febaba80131957 https://www.encodeproject.org/files/ENCFF490YME/@@download/ENCFF490YME.bam GRCh38 released borderline replicate concordance, mild to moderate bottlenecking ENCFF794MPI bam alignments ENCSR223MLH ChIP-seq EFO:0002067 K562 cell line Homo sapiens BRCA1-human ENCAB125OWA DNA False 2017-05-18 ENCODE 1 100 ENCFF231TGV, ENCFF276RGL, ENCFF643CGH 4288649564 ENCODE Processing Pipeline 5d37d50796f840118fd5f8faf2f325be https://www.encodeproject.org/files/ENCFF794MPI/@@download/ENCFF794MPI.bam GRCh38 released borderline replicate concordance, mild to moderate bottlenecking ENCFF609ZEP bigWig signal p-value ENCSR223MLH ChIP-seq EFO:0002067 K562 cell line Homo sapiens BRCA1-human ENCAB125OWA DNA False 2017-05-18 ENCODE 1 ENCFF790TAN, ENCFF794MPI 1205399758 ENCODE Processing Pipeline 46d30fdf566cde97dc3b63b292acf070 https://www.encodeproject.org/files/ENCFF609ZEP/@@download/ENCFF609ZEP.bigWig GRCh38 released borderline replicate concordance, mild to moderate bottlenecking ENCFF686DEX bed narrowPeak peaks ENCSR223MLH ChIP-seq EFO:0002067 K562 cell line Homo sapiens BRCA1-human ENCAB125OWA DNA False 2017-05-18 ENCODE 2 ENCFF490YME, ENCFF712WXB 6764661 ENCODE Processing Pipeline 339648fd144d43e9f9ead1f0457cc4f6 https://www.encodeproject.org/files/ENCFF686DEX/@@download/ENCFF686DEX.bed.gz GRCh38 released borderline replicate concordance, mild to moderate bottlenecking ENCFF295AWJ bigBed narrowPeak peaks ENCSR223MLH ChIP-seq EFO:0002067 K562 cell line Homo sapiens BRCA1-human ENCAB125OWA DNA False 2017-05-18 ENCODE 1, 2 ENCFF748JQT 12873644 ENCODE Processing Pipeline 19aa7aa03ea608f7c779dda0aed30a7a https://www.encodeproject.org/files/ENCFF295AWJ/@@download/ENCFF295AWJ.bigBed GRCh38 released borderline replicate concordance, mild to moderate bottlenecking ENCFF447LRS bigBed narrowPeak conservative idr thresholded peaks ENCSR223MLH ChIP-seq EFO:0002067 K562 cell line Homo sapiens BRCA1-human ENCAB125OWA DNA False 2017-05-18 ENCODE 1, 2 ENCFF565ADA 87844 ENCODE Processing Pipeline 2060d18cebe81b14b436a7da645b9bf5 https://www.encodeproject.org/files/ENCFF447LRS/@@download/ENCFF447LRS.bigBed GRCh38 released borderline replicate concordance, mild to moderate bottlenecking ENCFF450XAX bigWig signal p-value ENCSR223MLH ChIP-seq EFO:0002067 K562 cell line Homo sapiens BRCA1-human ENCAB125OWA DNA False 2017-05-18 ENCODE 2 ENCFF490YME, ENCFF712WXB 1000276410 ENCODE Processing Pipeline caf22b6a27a40aa7093260eb829692d7 https://www.encodeproject.org/files/ENCFF450XAX/@@download/ENCFF450XAX.bigWig GRCh38 released borderline replicate concordance, mild to moderate bottlenecking ENCFF870WRB bigWig signal p-value ENCSR223MLH ChIP-seq EFO:0002067 K562 cell line Homo sapiens BRCA1-human ENCAB125OWA DNA False 2017-05-18 ENCODE 1, 2 ENCFF490YME, ENCFF712WXB, ENCFF790TAN, ENCFF794MPI 1565142772 ENCODE Processing Pipeline 771e63e2caf3f0639a604dc0dfc11389 https://www.encodeproject.org/files/ENCFF870WRB/@@download/ENCFF870WRB.bigWig GRCh38 released borderline replicate concordance, mild to moderate bottlenecking ENCFF869MLQ bigWig fold change over control ENCSR223MLH ChIP-seq EFO:0002067 K562 cell line Homo sapiens BRCA1-human ENCAB125OWA DNA False 2017-05-18 ENCODE 1 ENCFF790TAN, ENCFF794MPI 1402806753 ENCODE Processing Pipeline 81af86ec83979f86d6021699844c2fd7 https://www.encodeproject.org/files/ENCFF869MLQ/@@download/ENCFF869MLQ.bigWig GRCh38 released borderline replicate concordance, mild to moderate bottlenecking ENCFF565ADA bed narrowPeak conservative idr thresholded peaks ENCSR223MLH ChIP-seq EFO:0002067 K562 cell line Homo sapiens BRCA1-human ENCAB125OWA DNA False 2017-05-18 ENCODE 1, 2 ENCFF419RSJ, ENCFF673NII, ENCFF686DEX, ENCFF748JQT 7842 ENCODE Processing Pipeline b9ca9de77e9af0d7e4d60c4c27995e42 https://www.encodeproject.org/files/ENCFF565ADA/@@download/ENCFF565ADA.bed.gz GRCh38 released borderline replicate concordance, mild to moderate bottlenecking ENCFF652NES bed narrowPeak optimal idr thresholded peaks ENCSR223MLH ChIP-seq EFO:0002067 K562 cell line Homo sapiens BRCA1-human ENCAB125OWA DNA False 2017-05-18 ENCODE 1, 2 ENCFF419RSJ, ENCFF673NII, ENCFF686DEX, ENCFF748JQT 16317 ENCODE Processing Pipeline a0c2cc1d1d1efce88907aa5363d135e5 https://www.encodeproject.org/files/ENCFF652NES/@@download/ENCFF652NES.bed.gz GRCh38 released borderline replicate concordance, mild to moderate bottlenecking ENCFF544ZIB bigWig signal p-value ENCSR223MLH ChIP-seq EFO:0002067 K562 cell line Homo sapiens BRCA1-human ENCAB125OWA DNA False 2017-05-18 ENCODE 1, 2 ENCFF160VXC, ENCFF593YDQ, ENCFF834TUP, ENCFF927PKK 1881939096 ENCODE Processing Pipeline 9bbedd56a8f79367a7162f2ea54d1cd9 https://www.encodeproject.org/files/ENCFF544ZIB/@@download/ENCFF544ZIB.bigWig hg19 released borderline replicate concordance, mild to moderate bottlenecking ENCFF782SPN bigWig fold change over control ENCSR223MLH ChIP-seq EFO:0002067 K562 cell line Homo sapiens BRCA1-human ENCAB125OWA DNA False 2017-05-18 ENCODE 2 ENCFF490YME, ENCFF712WXB 1311560498 ENCODE Processing Pipeline a6e0592fedfe52d24b2db78cb03364d9 https://www.encodeproject.org/files/ENCFF782SPN/@@download/ENCFF782SPN.bigWig GRCh38 released borderline replicate concordance, mild to moderate bottlenecking ENCFF748JQT bed narrowPeak peaks ENCSR223MLH ChIP-seq EFO:0002067 K562 cell line Homo sapiens BRCA1-human ENCAB125OWA DNA False 2017-05-18 ENCODE 1, 2 ENCFF490YME, ENCFF712WXB, ENCFF790TAN, ENCFF794MPI 7221944 ENCODE Processing Pipeline 72916aba8bafc8cb14999bac17914f99 https://www.encodeproject.org/files/ENCFF748JQT/@@download/ENCFF748JQT.bed.gz GRCh38 released borderline replicate concordance, mild to moderate bottlenecking ENCFF789WBS bigBed narrowPeak peaks ENCSR223MLH ChIP-seq EFO:0002067 K562 cell line Homo sapiens BRCA1-human ENCAB125OWA DNA False 2017-05-18 ENCODE 1 ENCFF673NII 10719702 ENCODE Processing Pipeline cdfd05f98270a68a8e2519e27bd7029a https://www.encodeproject.org/files/ENCFF789WBS/@@download/ENCFF789WBS.bigBed GRCh38 released borderline replicate concordance, mild to moderate bottlenecking ENCFF434BFU bigBed narrowPeak peaks ENCSR223MLH ChIP-seq EFO:0002067 K562 cell line Homo sapiens BRCA1-human ENCAB125OWA DNA False 2017-05-18 ENCODE 2 ENCFF686DEX 12981346 ENCODE Processing Pipeline bd007819f57f120acb20dd134c350529 https://www.encodeproject.org/files/ENCFF434BFU/@@download/ENCFF434BFU.bigBed GRCh38 released borderline replicate concordance, mild to moderate bottlenecking ENCFF126VNJ bigWig signal p-value ENCSR223MLH ChIP-seq EFO:0002067 K562 cell line Homo sapiens BRCA1-human ENCAB125OWA DNA False 2017-05-18 ENCODE 1 ENCFF160VXC, ENCFF593YDQ 1014285289 ENCODE Processing Pipeline ed4f2e9c3d6366ecbc6fe0b2ed03df8b https://www.encodeproject.org/files/ENCFF126VNJ/@@download/ENCFF126VNJ.bigWig hg19 released borderline replicate concordance, mild to moderate bottlenecking ENCFF060DEI bigBed narrowPeak optimal idr thresholded peaks ENCSR223MLH ChIP-seq EFO:0002067 K562 cell line Homo sapiens BRCA1-human ENCAB125OWA DNA False 2017-05-18 ENCODE 1, 2 ENCFF652NES 107862 ENCODE Processing Pipeline 7c7c9d47f8d1ca85081107f32bb5dd74 https://www.encodeproject.org/files/ENCFF060DEI/@@download/ENCFF060DEI.bigBed GRCh38 released borderline replicate concordance, mild to moderate bottlenecking ENCFF549BUB bigWig fold change over control ENCSR223MLH ChIP-seq EFO:0002067 K562 cell line Homo sapiens BRCA1-human ENCAB125OWA DNA False 2017-05-18 ENCODE 1, 2 ENCFF490YME, ENCFF712WXB, ENCFF790TAN, ENCFF794MPI 2266697757 ENCODE Processing Pipeline e654616856ad2884db60db5873a3cf44 https://www.encodeproject.org/files/ENCFF549BUB/@@download/ENCFF549BUB.bigWig GRCh38 released borderline replicate concordance, mild to moderate bottlenecking ENCFF673NII bed narrowPeak peaks ENCSR223MLH ChIP-seq EFO:0002067 K562 cell line Homo sapiens BRCA1-human ENCAB125OWA DNA False 2017-05-18 ENCODE 1 ENCFF790TAN, ENCFF794MPI 6586688 ENCODE Processing Pipeline 9efc5df0fe779e4476592da4eabc766a https://www.encodeproject.org/files/ENCFF673NII/@@download/ENCFF673NII.bed.gz GRCh38 released borderline replicate concordance, mild to moderate bottlenecking ENCFF479JNC bigWig signal p-value ENCSR223MLH ChIP-seq EFO:0002067 K562 cell line Homo sapiens BRCA1-human ENCAB125OWA DNA False 2017-05-18 ENCODE 2 ENCFF834TUP, ENCFF927PKK 1231496408 ENCODE Processing Pipeline df9339871381f33db01313d6a22df652 https://www.encodeproject.org/files/ENCFF479JNC/@@download/ENCFF479JNC.bigWig hg19 released borderline replicate concordance, mild to moderate bottlenecking ENCFF794MUJ bigWig fold change over control ENCSR223MLH ChIP-seq EFO:0002067 K562 cell line Homo sapiens BRCA1-human ENCAB125OWA DNA False 2017-05-18 ENCODE 1 ENCFF160VXC, ENCFF593YDQ 1393873126 ENCODE Processing Pipeline f040f872fd25af7e0bb10d7d8fbc6f87 https://www.encodeproject.org/files/ENCFF794MUJ/@@download/ENCFF794MUJ.bigWig hg19 released borderline replicate concordance, mild to moderate bottlenecking ENCFF002UZC bigWig fold change over control ENCSR223MLH ChIP-seq EFO:0002067 K562 cell line Homo sapiens BRCA1-human ENCAB125OWA DNA False 2017-05-18 ENCODE 2 ENCFF834TUP, ENCFF927PKK 1306990526 ENCODE Processing Pipeline 0de4a37ece00de9fca20a40839bd0f58 https://www.encodeproject.org/files/ENCFF002UZC/@@download/ENCFF002UZC.bigWig hg19 released borderline replicate concordance, mild to moderate bottlenecking ENCFF279WBA bigWig fold change over control ENCSR223MLH ChIP-seq EFO:0002067 K562 cell line Homo sapiens BRCA1-human ENCAB125OWA DNA False 2017-05-18 ENCODE 1, 2 ENCFF160VXC, ENCFF593YDQ, ENCFF834TUP, ENCFF927PKK 2295151493 ENCODE Processing Pipeline e4be9234bd37cf0e77658ea58c43b99e https://www.encodeproject.org/files/ENCFF279WBA/@@download/ENCFF279WBA.bigWig hg19 released borderline replicate concordance, mild to moderate bottlenecking ENCFF248TTW bed narrowPeak peaks ENCSR223MLH ChIP-seq EFO:0002067 K562 cell line Homo sapiens BRCA1-human ENCAB125OWA DNA False 2017-05-18 ENCODE 1, 2 ENCFF160VXC, ENCFF593YDQ, ENCFF834TUP, ENCFF927PKK 7216159 ENCODE Processing Pipeline 1112da394d3650229b3ebe1cf8bbbd23 https://www.encodeproject.org/files/ENCFF248TTW/@@download/ENCFF248TTW.bed.gz hg19 released borderline replicate concordance, mild to moderate bottlenecking ENCFF302RJE bed narrowPeak peaks ENCSR223MLH ChIP-seq EFO:0002067 K562 cell line Homo sapiens BRCA1-human ENCAB125OWA DNA False 2017-05-18 ENCODE 1 ENCFF160VXC, ENCFF593YDQ 6620058 ENCODE Processing Pipeline c1eca67e5d636b2e1ffce3d0369a48d8 https://www.encodeproject.org/files/ENCFF302RJE/@@download/ENCFF302RJE.bed.gz hg19 released borderline replicate concordance, mild to moderate bottlenecking ENCFF355GZC bigBed narrowPeak peaks ENCSR223MLH ChIP-seq EFO:0002067 K562 cell line Homo sapiens BRCA1-human ENCAB125OWA DNA False 2017-05-18 ENCODE 1 ENCFF302RJE 10706988 ENCODE Processing Pipeline a394c483cd8c71d186d16144e610ba49 https://www.encodeproject.org/files/ENCFF355GZC/@@download/ENCFF355GZC.bigBed hg19 released borderline replicate concordance, mild to moderate bottlenecking ENCFF439JGZ bigBed narrowPeak peaks ENCSR223MLH ChIP-seq EFO:0002067 K562 cell line Homo sapiens BRCA1-human ENCAB125OWA DNA False 2017-05-18 ENCODE 2 ENCFF507JPU 12966646 ENCODE Processing Pipeline 4f5ff5bab87b0ac8f519d928766761bc https://www.encodeproject.org/files/ENCFF439JGZ/@@download/ENCFF439JGZ.bigBed hg19 released borderline replicate concordance, mild to moderate bottlenecking ENCFF708LIZ bed narrowPeak conservative idr thresholded peaks ENCSR223MLH ChIP-seq EFO:0002067 K562 cell line Homo sapiens BRCA1-human ENCAB125OWA DNA False 2017-05-18 ENCODE 1, 2 ENCFF001TDO, ENCFF248TTW, ENCFF302RJE, ENCFF507JPU 7468 ENCODE Processing Pipeline a90c858ec47788b6b5c67ca3a0deeaf7 https://www.encodeproject.org/files/ENCFF708LIZ/@@download/ENCFF708LIZ.bed.gz hg19 released borderline replicate concordance, mild to moderate bottlenecking ENCFF507JPU bed narrowPeak peaks ENCSR223MLH ChIP-seq EFO:0002067 K562 cell line Homo sapiens BRCA1-human ENCAB125OWA DNA False 2017-05-18 ENCODE 2 ENCFF834TUP, ENCFF927PKK 6761455 ENCODE Processing Pipeline 192e9a0745904e52ee8620b8be176c1b https://www.encodeproject.org/files/ENCFF507JPU/@@download/ENCFF507JPU.bed.gz hg19 released borderline replicate concordance, mild to moderate bottlenecking ENCFF978EJQ bigBed narrowPeak peaks ENCSR223MLH ChIP-seq EFO:0002067 K562 cell line Homo sapiens BRCA1-human ENCAB125OWA DNA False 2017-05-18 ENCODE 1, 2 ENCFF248TTW 12856241 ENCODE Processing Pipeline cbcb51298e854f7c210df430f341b42c https://www.encodeproject.org/files/ENCFF978EJQ/@@download/ENCFF978EJQ.bigBed hg19 released borderline replicate concordance, mild to moderate bottlenecking ENCFF549GMO bed narrowPeak optimal idr thresholded peaks ENCSR223MLH ChIP-seq EFO:0002067 K562 cell line Homo sapiens BRCA1-human ENCAB125OWA DNA False 2017-05-18 ENCODE 1, 2 ENCFF001TDO, ENCFF248TTW, ENCFF302RJE, ENCFF507JPU 18922 ENCODE Processing Pipeline df978590cd462b0053dd3bfc64f17142 https://www.encodeproject.org/files/ENCFF549GMO/@@download/ENCFF549GMO.bed.gz hg19 released borderline replicate concordance, mild to moderate bottlenecking ENCFF352HZZ bigBed narrowPeak conservative idr thresholded peaks ENCSR223MLH ChIP-seq EFO:0002067 K562 cell line Homo sapiens BRCA1-human ENCAB125OWA DNA False 2017-05-18 ENCODE 1, 2 ENCFF708LIZ 85486 ENCODE Processing Pipeline aa86aef2b7cf027924cedaf94a95bdf3 https://www.encodeproject.org/files/ENCFF352HZZ/@@download/ENCFF352HZZ.bigBed hg19 released borderline replicate concordance, mild to moderate bottlenecking ENCFF480QAT bigBed narrowPeak optimal idr thresholded peaks ENCSR223MLH ChIP-seq EFO:0002067 K562 cell line Homo sapiens BRCA1-human ENCAB125OWA DNA False 2017-05-18 ENCODE 1, 2 ENCFF549GMO 98788 ENCODE Processing Pipeline 8a6d6d7fadb88ffb4755df4484c20ade https://www.encodeproject.org/files/ENCFF480QAT/@@download/ENCFF480QAT.bigBed hg19 released borderline replicate concordance, mild to moderate bottlenecking ENCFF000YZI bam alignments ENCSR000EGW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMC3-human ENCAB000AKX DNA see document see document False 2011-10-29 ENCODE 1 ENCFF000YZX 229362211 Michael Snyder, Stanford 6d60a3ee75f878f24d4b94e59706822a https://www.encodeproject.org/files/ENCFF000YZI/@@download/ENCFF000YZI.bam hg19 archived low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample insufficient read depth ENCFF000YZK bigBed narrowPeak peaks ENCSR000EGW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMC3-human ENCAB000AKX DNA see document see document False 2011-10-29 ENCODE ENCFF001VOT 1822902 Michael Snyder, Stanford f55127e00a6c09e183b7d9d516df6de0 https://www.encodeproject.org/files/ENCFF000YZK/@@download/ENCFF000YZK.bigBed hg19 archived low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample insufficient read depth ENCFF000YZL bam alignments ENCSR000EGW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMC3-human ENCAB000AKX DNA see document see document False 2011-10-29 ENCODE 2 ENCFF000YZY 278599432 Michael Snyder, Stanford 8bca40db86927fffdbf149c369d83065 https://www.encodeproject.org/files/ENCFF000YZL/@@download/ENCFF000YZL.bam hg19 archived low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample insufficient read depth ENCFF000YZM bigWig signal ENCSR000EGW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMC3-human ENCAB000AKX DNA see document see document False 2011-10-29 ENCODE 244396992 Michael Snyder, Stanford b6086105790c29856f74513d46a48d27 https://www.encodeproject.org/files/ENCFF000YZM/@@download/ENCFF000YZM.bigWig hg19 archived low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample, missing derived_from insufficient read depth ENCFF000YZX fastq reads ENCSR000EGW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMC3-human ENCAB000AKX DNA see document see document False 2011-10-29 ENCODE 1 1 36 single-ended 440276086 Michael Snyder, Stanford c1a48c3caf3541508e214dc552e38d64 https://www.encodeproject.org/files/ENCFF000YZX/@@download/ENCFF000YZX.fastq.gz Illumina Genome Analyzer /files/ENCFF000YRB/ released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample insufficient read depth ENCFF000YZY fastq reads ENCSR000EGW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMC3-human ENCAB000AKX DNA see document see document False 2011-10-29 ENCODE 2 1 36 single-ended 522032383 Michael Snyder, Stanford ef0d2b86c106ca8dd654b3e8a92a43ec https://www.encodeproject.org/files/ENCFF000YZY/@@download/ENCFF000YZY.fastq.gz Illumina Genome Analyzer /files/ENCFF000YRB/ released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample insufficient read depth ENCFF001VOT bed narrowPeak peaks ENCSR000EGW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMC3-human ENCAB000AKX DNA see document see document False 2011-10-29 ENCODE 771829 Michael Snyder, Stanford a72c84f021798c44d11750ea7679ffbf https://www.encodeproject.org/files/ENCFF001VOT/@@download/ENCFF001VOT.bed.gz hg19 archived low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample, missing derived_from insufficient read depth ENCFF002CYA bed narrowPeak optimal idr thresholded peaks ENCSR000EGW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMC3-human ENCAB000AKX DNA see document see document False 2011-10-29 ENCODE 539320 ENCODE Consortium Analysis Working Group 95bc0f5d20a06647d0aaa79420ee0dc4 https://www.encodeproject.org/files/ENCFF002CYA/@@download/ENCFF002CYA.bed.gz hg19 archived low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample, missing derived_from insufficient read depth ENCFF695EAS bigBed narrowPeak optimal idr thresholded peaks ENCSR000EGW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMC3-human ENCAB000AKX DNA see document see document False 2011-10-29 ENCODE ENCFF002CYA 1101589 ENCODE Consortium ab97ade646be1b90d6056ae8852d3318 https://www.encodeproject.org/files/ENCFF695EAS/@@download/ENCFF695EAS.bigBed hg19 archived low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample insufficient read depth ENCFF355PQK bam alignments ENCSR000EGW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMC3-human ENCAB000AKX DNA see document see document False 2011-10-29 ENCODE 1 36 ENCFF000YZX, ENCFF643CGH 358269351 ENCODE Processing Pipeline c701136f2a96b9dbc346fd11939c841e https://www.encodeproject.org/files/ENCFF355PQK/@@download/ENCFF355PQK.bam GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample insufficient read depth ENCFF353WBI bam unfiltered alignments ENCSR000EGW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMC3-human ENCAB000AKX DNA see document see document False 2011-10-29 ENCODE 1 36 ENCFF000YZX, ENCFF643CGH 556396325 ENCODE Processing Pipeline 9993b9dfd4ea579fc858529882e64d6f https://www.encodeproject.org/files/ENCFF353WBI/@@download/ENCFF353WBI.bam GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample insufficient read depth ENCFF365BCR bam alignments ENCSR000EGW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMC3-human ENCAB000AKX DNA see document see document False 2011-10-29 ENCODE 2 36 ENCFF000YZY, ENCFF643CGH 443640502 ENCODE Processing Pipeline a48aa486a33c1344117443ac715c76ab https://www.encodeproject.org/files/ENCFF365BCR/@@download/ENCFF365BCR.bam GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample insufficient read depth ENCFF271XMG bam unfiltered alignments ENCSR000EGW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMC3-human ENCAB000AKX DNA see document see document False 2011-10-29 ENCODE 2 36 ENCFF000YZY, ENCFF643CGH 651133461 ENCODE Processing Pipeline dba042a85740fc4d55680ae15ac6760b https://www.encodeproject.org/files/ENCFF271XMG/@@download/ENCFF271XMG.bam GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample insufficient read depth ENCFF762TSN bam unfiltered alignments ENCSR000EGW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMC3-human ENCAB000AKX DNA see document see document False 2011-10-29 ENCODE 2 36 ENCFF000YZY, ENCFF807MUK 648346500 ENCODE Processing Pipeline cce613507eb57d425c2f9c3edef63ad2 https://www.encodeproject.org/files/ENCFF762TSN/@@download/ENCFF762TSN.bam hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample insufficient read depth ENCFF359UWD bam alignments ENCSR000EGW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMC3-human ENCAB000AKX DNA see document see document False 2011-10-29 ENCODE 1 36 ENCFF000YZX, ENCFF807MUK 358598104 ENCODE Processing Pipeline 8b698d83db0f9f6187e6aaeb3e097c77 https://www.encodeproject.org/files/ENCFF359UWD/@@download/ENCFF359UWD.bam hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample insufficient read depth ENCFF013ESF bam unfiltered alignments ENCSR000EGW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMC3-human ENCAB000AKX DNA see document see document False 2011-10-29 ENCODE 1 36 ENCFF000YZX, ENCFF807MUK 554125195 ENCODE Processing Pipeline 40723c878cbd1da52e3f69567f52d8cb https://www.encodeproject.org/files/ENCFF013ESF/@@download/ENCFF013ESF.bam hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample insufficient read depth ENCFF845WVY bam alignments ENCSR000EGW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMC3-human ENCAB000AKX DNA see document see document False 2011-10-29 ENCODE 2 36 ENCFF000YZY, ENCFF807MUK 443970675 ENCODE Processing Pipeline 1476bc4c93496a9f50f06dd5c9f1f44f https://www.encodeproject.org/files/ENCFF845WVY/@@download/ENCFF845WVY.bam hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample insufficient read depth ENCFF199YLO bigWig signal p-value ENCSR000EGW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMC3-human ENCAB000AKX DNA see document see document False 2011-10-29 ENCODE 1 ENCFF023NGN, ENCFF355PQK 347039296 ENCODE Processing Pipeline 017452f7a6523d6093047cb7ad87d01f https://www.encodeproject.org/files/ENCFF199YLO/@@download/ENCFF199YLO.bigWig GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample insufficient read depth ENCFF067OLL bigWig signal p-value ENCSR000EGW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMC3-human ENCAB000AKX DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF023NGN, ENCFF355PQK, ENCFF365BCR 448957496 ENCODE Processing Pipeline 1c7680472e49ae76e7a0de6fecbfff62 https://www.encodeproject.org/files/ENCFF067OLL/@@download/ENCFF067OLL.bigWig GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample insufficient read depth ENCFF790SCG bigWig signal p-value ENCSR000EGW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMC3-human ENCAB000AKX DNA see document see document False 2011-10-29 ENCODE 2 ENCFF023NGN, ENCFF365BCR 428731657 ENCODE Processing Pipeline 09a03cbcd52e81b05a2329bfacad0d5c https://www.encodeproject.org/files/ENCFF790SCG/@@download/ENCFF790SCG.bigWig GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample insufficient read depth ENCFF635FNY bigWig fold change over control ENCSR000EGW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMC3-human ENCAB000AKX DNA see document see document False 2011-10-29 ENCODE 1 ENCFF023NGN, ENCFF355PQK 208280833 ENCODE Processing Pipeline ab86f7bbcc4055eca02378142b04b373 https://www.encodeproject.org/files/ENCFF635FNY/@@download/ENCFF635FNY.bigWig GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample insufficient read depth ENCFF387DUZ bigWig fold change over control ENCSR000EGW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMC3-human ENCAB000AKX DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF023NGN, ENCFF355PQK, ENCFF365BCR 407896907 ENCODE Processing Pipeline 90720d417954bb81e16d6b76f566f86a https://www.encodeproject.org/files/ENCFF387DUZ/@@download/ENCFF387DUZ.bigWig GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample insufficient read depth ENCFF797HNK bigWig fold change over control ENCSR000EGW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMC3-human ENCAB000AKX DNA see document see document False 2011-10-29 ENCODE 2 ENCFF023NGN, ENCFF365BCR 251219624 ENCODE Processing Pipeline 5fa455bd301744ff096c4e6381cc2443 https://www.encodeproject.org/files/ENCFF797HNK/@@download/ENCFF797HNK.bigWig GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample insufficient read depth ENCFF565ATC bigBed narrowPeak peaks ENCSR000EGW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMC3-human ENCAB000AKX DNA see document see document False 2011-10-29 ENCODE 1 ENCFF995RPX 8882759 ENCODE Processing Pipeline aace5bc1078b37199d72f3fefdde4ed6 https://www.encodeproject.org/files/ENCFF565ATC/@@download/ENCFF565ATC.bigBed GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample insufficient read depth ENCFF721SRJ bed narrowPeak peaks ENCSR000EGW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMC3-human ENCAB000AKX DNA see document see document False 2011-10-29 ENCODE 2 ENCFF023NGN, ENCFF365BCR 4299042 ENCODE Processing Pipeline 8d4bbeb45a99af567455f4da994b04e5 https://www.encodeproject.org/files/ENCFF721SRJ/@@download/ENCFF721SRJ.bed.gz GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample insufficient read depth ENCFF995RPX bed narrowPeak peaks ENCSR000EGW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMC3-human ENCAB000AKX DNA see document see document False 2011-10-29 ENCODE 1 ENCFF023NGN, ENCFF355PQK 3696739 ENCODE Processing Pipeline 7e8ff814648709abaf90c0c0b7e234ac https://www.encodeproject.org/files/ENCFF995RPX/@@download/ENCFF995RPX.bed.gz GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample insufficient read depth ENCFF151QJM bed narrowPeak peaks ENCSR000EGW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMC3-human ENCAB000AKX DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF023NGN, ENCFF355PQK, ENCFF365BCR 4804647 ENCODE Processing Pipeline 111db4e634d317fba0756ac2325159ab https://www.encodeproject.org/files/ENCFF151QJM/@@download/ENCFF151QJM.bed.gz GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample insufficient read depth ENCFF662LUH bed narrowPeak conservative idr thresholded peaks ENCSR000EGW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMC3-human ENCAB000AKX DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF151QJM, ENCFF419RSJ, ENCFF721SRJ, ENCFF995RPX 442869 ENCODE Processing Pipeline fc88b324e2fe8080ad2b30b605fb8e8b https://www.encodeproject.org/files/ENCFF662LUH/@@download/ENCFF662LUH.bed.gz GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample insufficient read depth ENCFF278VOA bigBed narrowPeak peaks ENCSR000EGW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMC3-human ENCAB000AKX DNA see document see document False 2011-10-29 ENCODE 2 ENCFF721SRJ 10288188 ENCODE Processing Pipeline 082d837d8a38e865d59702e3511d6f51 https://www.encodeproject.org/files/ENCFF278VOA/@@download/ENCFF278VOA.bigBed GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample insufficient read depth ENCFF046YJD bigBed narrowPeak peaks ENCSR000EGW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMC3-human ENCAB000AKX DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF151QJM 10969900 ENCODE Processing Pipeline 85b8afec82bcdf08eb4aa2a1af7c205b https://www.encodeproject.org/files/ENCFF046YJD/@@download/ENCFF046YJD.bigBed GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample insufficient read depth ENCFF339LVM bigBed narrowPeak optimal idr thresholded peaks ENCSR000EGW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMC3-human ENCAB000AKX DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF175UEE 828848 ENCODE Processing Pipeline 8546205857adb8f8701e4677f0befc83 https://www.encodeproject.org/files/ENCFF339LVM/@@download/ENCFF339LVM.bigBed GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample insufficient read depth ENCFF175UEE bed narrowPeak optimal idr thresholded peaks ENCSR000EGW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMC3-human ENCAB000AKX DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF151QJM, ENCFF419RSJ, ENCFF721SRJ, ENCFF995RPX 451497 ENCODE Processing Pipeline 4dd98262b2cba021b22620f40fbb0ad5 https://www.encodeproject.org/files/ENCFF175UEE/@@download/ENCFF175UEE.bed.gz GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample insufficient read depth ENCFF045XJJ bigBed narrowPeak conservative idr thresholded peaks ENCSR000EGW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMC3-human ENCAB000AKX DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF662LUH 817462 ENCODE Processing Pipeline 8382d2974992b380f89f1a3dfc3064e3 https://www.encodeproject.org/files/ENCFF045XJJ/@@download/ENCFF045XJJ.bigBed GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample insufficient read depth ENCFF653RFT bigWig signal p-value ENCSR000EGW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMC3-human ENCAB000AKX DNA see document see document False 2011-10-29 ENCODE 1 ENCFF359UWD, ENCFF710NTS 455157613 ENCODE Processing Pipeline 65fc1ac49aa94e93ec9e56a81fc7acb5 https://www.encodeproject.org/files/ENCFF653RFT/@@download/ENCFF653RFT.bigWig hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample insufficient read depth ENCFF253VJL bigWig fold change over control ENCSR000EGW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMC3-human ENCAB000AKX DNA see document see document False 2011-10-29 ENCODE 1 ENCFF359UWD, ENCFF710NTS 213302448 ENCODE Processing Pipeline c458f616ef1f020e74f9dba67a8b5352 https://www.encodeproject.org/files/ENCFF253VJL/@@download/ENCFF253VJL.bigWig hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample insufficient read depth ENCFF981HFS bigWig signal p-value ENCSR000EGW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMC3-human ENCAB000AKX DNA see document see document False 2011-10-29 ENCODE 2 ENCFF710NTS, ENCFF845WVY 362343155 ENCODE Processing Pipeline d79a3a15074bbd8a3b01d3958cd3c2f1 https://www.encodeproject.org/files/ENCFF981HFS/@@download/ENCFF981HFS.bigWig hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample insufficient read depth ENCFF647UOK bigWig signal p-value ENCSR000EGW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMC3-human ENCAB000AKX DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF359UWD, ENCFF710NTS, ENCFF845WVY 485849460 ENCODE Processing Pipeline 995c083ce38fb5a5d4c003f022a71f30 https://www.encodeproject.org/files/ENCFF647UOK/@@download/ENCFF647UOK.bigWig hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample insufficient read depth ENCFF003UFU bigWig fold change over control ENCSR000EGW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMC3-human ENCAB000AKX DNA see document see document False 2011-10-29 ENCODE 2 ENCFF710NTS, ENCFF845WVY 251378690 ENCODE Processing Pipeline d1b1d2eeb4ed0b35d52a1111fd87d29c https://www.encodeproject.org/files/ENCFF003UFU/@@download/ENCFF003UFU.bigWig hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample insufficient read depth ENCFF041YJV bed narrowPeak peaks ENCSR000EGW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMC3-human ENCAB000AKX DNA see document see document False 2011-10-29 ENCODE 2 ENCFF710NTS, ENCFF845WVY 4305604 ENCODE Processing Pipeline 2371b94b7137fd7a56b567acc2631c85 https://www.encodeproject.org/files/ENCFF041YJV/@@download/ENCFF041YJV.bed.gz hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample insufficient read depth ENCFF197FVX bigBed narrowPeak peaks ENCSR000EGW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMC3-human ENCAB000AKX DNA see document see document False 2011-10-29 ENCODE 2 ENCFF041YJV 10289374 ENCODE Processing Pipeline b34aaf64b2c3c75541393ca09095a58e https://www.encodeproject.org/files/ENCFF197FVX/@@download/ENCFF197FVX.bigBed hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample insufficient read depth ENCFF483CZB bed narrowPeak conservative idr thresholded peaks ENCSR000EGW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMC3-human ENCAB000AKX DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF001TDO, ENCFF041YJV, ENCFF714FTS, ENCFF892UIH 442270 ENCODE Processing Pipeline 734af70c087e70baf325717f3195035e https://www.encodeproject.org/files/ENCFF483CZB/@@download/ENCFF483CZB.bed.gz hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample insufficient read depth ENCFF011ZYD bigBed narrowPeak conservative idr thresholded peaks ENCSR000EGW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMC3-human ENCAB000AKX DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF483CZB 815386 ENCODE Processing Pipeline 2a10422a60e4e22b5dabd6bcf93bc595 https://www.encodeproject.org/files/ENCFF011ZYD/@@download/ENCFF011ZYD.bigBed hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample insufficient read depth ENCFF513GCD bigBed narrowPeak peaks ENCSR000EGW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMC3-human ENCAB000AKX DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF892UIH 10959221 ENCODE Processing Pipeline 228130b9ac1057e7ee2c1ac831a15838 https://www.encodeproject.org/files/ENCFF513GCD/@@download/ENCFF513GCD.bigBed hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample insufficient read depth ENCFF041YQC bed narrowPeak optimal idr thresholded peaks ENCSR000EGW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMC3-human ENCAB000AKX DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF001TDO, ENCFF041YJV, ENCFF714FTS, ENCFF892UIH 454792 ENCODE Processing Pipeline 2933d00ffe16c0f6bdc6e17cf2aa672e https://www.encodeproject.org/files/ENCFF041YQC/@@download/ENCFF041YQC.bed.gz hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample insufficient read depth ENCFF479BWQ bigWig fold change over control ENCSR000EGW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMC3-human ENCAB000AKX DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF359UWD, ENCFF710NTS, ENCFF845WVY 416013078 ENCODE Processing Pipeline 7083596aa04bb3bd461d2ba7e324ca6c https://www.encodeproject.org/files/ENCFF479BWQ/@@download/ENCFF479BWQ.bigWig hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample insufficient read depth ENCFF714FTS bed narrowPeak peaks ENCSR000EGW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMC3-human ENCAB000AKX DNA see document see document False 2011-10-29 ENCODE 1 ENCFF359UWD, ENCFF710NTS 3707352 ENCODE Processing Pipeline 0a5fdaca0482075d611610ccfc931034 https://www.encodeproject.org/files/ENCFF714FTS/@@download/ENCFF714FTS.bed.gz hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample insufficient read depth ENCFF892UIH bed narrowPeak peaks ENCSR000EGW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMC3-human ENCAB000AKX DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF359UWD, ENCFF710NTS, ENCFF845WVY 4807747 ENCODE Processing Pipeline afdb46ca0c625d0fd83de406cc138592 https://www.encodeproject.org/files/ENCFF892UIH/@@download/ENCFF892UIH.bed.gz hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample insufficient read depth ENCFF656AKL bigBed narrowPeak peaks ENCSR000EGW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMC3-human ENCAB000AKX DNA see document see document False 2011-10-29 ENCODE 1 ENCFF714FTS 8886512 ENCODE Processing Pipeline 2be3996a1925875a7202c0a18ddd9f2b https://www.encodeproject.org/files/ENCFF656AKL/@@download/ENCFF656AKL.bigBed hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample insufficient read depth ENCFF441IDR bigBed narrowPeak optimal idr thresholded peaks ENCSR000EGW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMC3-human ENCAB000AKX DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF041YQC 833281 ENCODE Processing Pipeline 245f9c4225d4d9d7886c048b81f85cb7 https://www.encodeproject.org/files/ENCFF441IDR/@@download/ENCFF441IDR.bigBed hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample insufficient read depth ENCFF095DPD fastq reads ENCSR387SYS ChIP-seq EFO:0002067 K562 cell line Homo sapiens DEAF1-human ENCAB698FCU DNA False 2016-03-30 ENCODE 1 1 50 single-ended 1174770776 Richard Myers, HAIB b86ff114ffba2af94130fed4be2001b2 SRA:SRR5338831 https://www.encodeproject.org/files/ENCFF095DPD/@@download/ENCFF095DPD.fastq.gz Illumina HiSeq 2000 /files/ENCFF913JVQ/ released low read depth, antibody characterized with exemption ENCFF985HSY bigWig fold change over control ENCSR387SYS ChIP-seq EFO:0002067 K562 cell line Homo sapiens DEAF1-human ENCAB698FCU DNA False 2016-03-30 ENCODE 1 ENCFF444TNY, ENCFF847YDJ, ENCFF875XTU 671051065 ENCODE Processing Pipeline 5f3c6843ad3f9525db02dbc1543e570c https://www.encodeproject.org/files/ENCFF985HSY/@@download/ENCFF985HSY.bigWig hg19 released low read depth, antibody characterized with exemption ENCFF032FAC bigWig signal p-value ENCSR387SYS ChIP-seq EFO:0002067 K562 cell line Homo sapiens DEAF1-human ENCAB698FCU DNA False 2016-03-30 ENCODE 1 ENCFF444TNY, ENCFF847YDJ, ENCFF875XTU 923187077 ENCODE Processing Pipeline 88dee013c43934bee4ed7e0580189c06 https://www.encodeproject.org/files/ENCFF032FAC/@@download/ENCFF032FAC.bigWig hg19 released low read depth, antibody characterized with exemption ENCFF087LWV fastq reads ENCSR387SYS ChIP-seq EFO:0002067 K562 cell line Homo sapiens DEAF1-human ENCAB698FCU DNA False 2016-03-30 ENCODE 2 1 50 single-ended 1389436775 Richard Myers, HAIB 5e77e780e28000cab748682eb0e91ac7 SRA:SRR5338832 https://www.encodeproject.org/files/ENCFF087LWV/@@download/ENCFF087LWV.fastq.gz Illumina HiSeq 2000 /files/ENCFF993VKM/ released low read depth, antibody characterized with exemption ENCFF301SVO bam unfiltered alignments ENCSR387SYS ChIP-seq EFO:0002067 K562 cell line Homo sapiens DEAF1-human ENCAB698FCU DNA False 2016-03-30 ENCODE 1 50 ENCFF095DPD, ENCFF807MUK 1274064679 ENCODE Processing Pipeline cffd6322eb1e1ecb2a2983c2548910c1 https://www.encodeproject.org/files/ENCFF301SVO/@@download/ENCFF301SVO.bam hg19 released low read depth, antibody characterized with exemption ENCFF552FVW bam unfiltered alignments ENCSR387SYS ChIP-seq EFO:0002067 K562 cell line Homo sapiens DEAF1-human ENCAB698FCU DNA False 2016-03-30 ENCODE 2 50 ENCFF087LWV, ENCFF807MUK 1566184110 ENCODE Processing Pipeline 7decc94c712689a5ec8c7d9327deedbb https://www.encodeproject.org/files/ENCFF552FVW/@@download/ENCFF552FVW.bam hg19 released low read depth, antibody characterized with exemption ENCFF989NDR bam unfiltered alignments ENCSR387SYS ChIP-seq EFO:0002067 K562 cell line Homo sapiens DEAF1-human ENCAB698FCU DNA False 2016-03-30 ENCODE 1 50 ENCFF095DPD, ENCFF643CGH 1278346389 ENCODE Processing Pipeline 9040035b91ace8aced628f2d0aba644d https://www.encodeproject.org/files/ENCFF989NDR/@@download/ENCFF989NDR.bam GRCh38 released low read depth, antibody characterized with exemption ENCFF320BMV bam unfiltered alignments ENCSR387SYS ChIP-seq EFO:0002067 K562 cell line Homo sapiens DEAF1-human ENCAB698FCU DNA False 2016-03-30 ENCODE 2 50 ENCFF087LWV, ENCFF643CGH 1572724611 ENCODE Processing Pipeline 3b4f1c0c19bc2dcd1c22bd0855b6d925 https://www.encodeproject.org/files/ENCFF320BMV/@@download/ENCFF320BMV.bam GRCh38 released low read depth, antibody characterized with exemption ENCFF875XTU bam alignments ENCSR387SYS ChIP-seq EFO:0002067 K562 cell line Homo sapiens DEAF1-human ENCAB698FCU DNA False 2016-03-30 ENCODE 1 50 ENCFF095DPD, ENCFF807MUK 944850440 ENCODE Processing Pipeline 63cf815bf509ea91b361efb619ca8d07 https://www.encodeproject.org/files/ENCFF875XTU/@@download/ENCFF875XTU.bam hg19 released low read depth, antibody characterized with exemption ENCFF584YAE bam alignments ENCSR387SYS ChIP-seq EFO:0002067 K562 cell line Homo sapiens DEAF1-human ENCAB698FCU DNA False 2016-03-30 ENCODE 2 50 ENCFF087LWV, ENCFF807MUK 1198640942 ENCODE Processing Pipeline 6fb515641c762da6db4a4031f8135307 https://www.encodeproject.org/files/ENCFF584YAE/@@download/ENCFF584YAE.bam hg19 released low read depth, antibody characterized with exemption ENCFF056XVW bam alignments ENCSR387SYS ChIP-seq EFO:0002067 K562 cell line Homo sapiens DEAF1-human ENCAB698FCU DNA False 2016-03-30 ENCODE 1 50 ENCFF095DPD, ENCFF643CGH 944413952 ENCODE Processing Pipeline e8e474b3e5144239c8a2669d2b083269 https://www.encodeproject.org/files/ENCFF056XVW/@@download/ENCFF056XVW.bam GRCh38 released low read depth, antibody characterized with exemption ENCFF540SXT bam alignments ENCSR387SYS ChIP-seq EFO:0002067 K562 cell line Homo sapiens DEAF1-human ENCAB698FCU DNA False 2016-03-30 ENCODE 2 50 ENCFF087LWV, ENCFF643CGH 1198353720 ENCODE Processing Pipeline aa3a1b13fc69355779aaf4d83bc1d5f6 https://www.encodeproject.org/files/ENCFF540SXT/@@download/ENCFF540SXT.bam GRCh38 released low read depth, antibody characterized with exemption ENCFF678YIU bigWig signal p-value ENCSR387SYS ChIP-seq EFO:0002067 K562 cell line Homo sapiens DEAF1-human ENCAB698FCU DNA False 2016-03-30 ENCODE 1 ENCFF056XVW, ENCFF092PMQ, ENCFF162ZOO 922455886 ENCODE Processing Pipeline 9e3284a35783023d66947ab42568c801 https://www.encodeproject.org/files/ENCFF678YIU/@@download/ENCFF678YIU.bigWig GRCh38 released low read depth, antibody characterized with exemption ENCFF324TWT bigWig signal p-value ENCSR387SYS ChIP-seq EFO:0002067 K562 cell line Homo sapiens DEAF1-human ENCAB698FCU DNA False 2016-03-30 ENCODE 2 ENCFF092PMQ, ENCFF162ZOO, ENCFF540SXT 941162646 ENCODE Processing Pipeline 4da43bf408382c8d6b9e7a7da3cb3f6c https://www.encodeproject.org/files/ENCFF324TWT/@@download/ENCFF324TWT.bigWig GRCh38 released low read depth, antibody characterized with exemption ENCFF526TGH bigWig signal p-value ENCSR387SYS ChIP-seq EFO:0002067 K562 cell line Homo sapiens DEAF1-human ENCAB698FCU DNA False 2016-03-30 ENCODE 1, 2 ENCFF056XVW, ENCFF092PMQ, ENCFF162ZOO, ENCFF540SXT 1083035089 ENCODE Processing Pipeline 365316e0c56fb9f2019a091041d6b4cf https://www.encodeproject.org/files/ENCFF526TGH/@@download/ENCFF526TGH.bigWig GRCh38 released low read depth, antibody characterized with exemption ENCFF523UOR bigWig fold change over control ENCSR387SYS ChIP-seq EFO:0002067 K562 cell line Homo sapiens DEAF1-human ENCAB698FCU DNA False 2016-03-30 ENCODE 1 ENCFF056XVW, ENCFF092PMQ, ENCFF162ZOO 669548724 ENCODE Processing Pipeline 4e041c0473cd5a577fcdf092f685d341 https://www.encodeproject.org/files/ENCFF523UOR/@@download/ENCFF523UOR.bigWig GRCh38 released low read depth, antibody characterized with exemption ENCFF385HPQ bigWig fold change over control ENCSR387SYS ChIP-seq EFO:0002067 K562 cell line Homo sapiens DEAF1-human ENCAB698FCU DNA False 2016-03-30 ENCODE 2 ENCFF092PMQ, ENCFF162ZOO, ENCFF540SXT 816696554 ENCODE Processing Pipeline 649a57edc78040c1baf8c1caeb83f811 https://www.encodeproject.org/files/ENCFF385HPQ/@@download/ENCFF385HPQ.bigWig GRCh38 released low read depth, antibody characterized with exemption ENCFF766RAU bigWig fold change over control ENCSR387SYS ChIP-seq EFO:0002067 K562 cell line Homo sapiens DEAF1-human ENCAB698FCU DNA False 2016-03-30 ENCODE 1, 2 ENCFF056XVW, ENCFF092PMQ, ENCFF162ZOO, ENCFF540SXT 1115202243 ENCODE Processing Pipeline d4a0a10d497b4275c7b9728b8e1242fc https://www.encodeproject.org/files/ENCFF766RAU/@@download/ENCFF766RAU.bigWig GRCh38 released low read depth, antibody characterized with exemption ENCFF290BUP bed narrowPeak peaks ENCSR387SYS ChIP-seq EFO:0002067 K562 cell line Homo sapiens DEAF1-human ENCAB698FCU DNA False 2016-03-30 ENCODE 1 ENCFF056XVW, ENCFF092PMQ, ENCFF162ZOO 5862231 ENCODE Processing Pipeline a1851aec8d208649a3b9f1729ac5be39 https://www.encodeproject.org/files/ENCFF290BUP/@@download/ENCFF290BUP.bed.gz GRCh38 released low read depth, antibody characterized with exemption ENCFF359CNE bed narrowPeak peaks ENCSR387SYS ChIP-seq EFO:0002067 K562 cell line Homo sapiens DEAF1-human ENCAB698FCU DNA False 2016-03-30 ENCODE 2 ENCFF092PMQ, ENCFF162ZOO, ENCFF540SXT 6153223 ENCODE Processing Pipeline d64d8d256acff1ce3d67ffd20f4997e8 https://www.encodeproject.org/files/ENCFF359CNE/@@download/ENCFF359CNE.bed.gz GRCh38 released low read depth, antibody characterized with exemption ENCFF491MFV bigBed narrowPeak peaks ENCSR387SYS ChIP-seq EFO:0002067 K562 cell line Homo sapiens DEAF1-human ENCAB698FCU DNA False 2016-03-30 ENCODE 2 ENCFF359CNE 13434710 ENCODE Processing Pipeline d49ec20a498bd12e6bb43eeb033168e6 https://www.encodeproject.org/files/ENCFF491MFV/@@download/ENCFF491MFV.bigBed GRCh38 released low read depth, antibody characterized with exemption ENCFF057EGU bed narrowPeak peaks ENCSR387SYS ChIP-seq EFO:0002067 K562 cell line Homo sapiens DEAF1-human ENCAB698FCU DNA False 2016-03-30 ENCODE 1, 2 ENCFF056XVW, ENCFF092PMQ, ENCFF162ZOO, ENCFF540SXT 6545134 ENCODE Processing Pipeline 13d8b796d014fd1a1aafa5b03e5c2569 https://www.encodeproject.org/files/ENCFF057EGU/@@download/ENCFF057EGU.bed.gz GRCh38 released low read depth, antibody characterized with exemption ENCFF066WUL bigBed narrowPeak peaks ENCSR387SYS ChIP-seq EFO:0002067 K562 cell line Homo sapiens DEAF1-human ENCAB698FCU DNA False 2016-03-30 ENCODE 1 ENCFF290BUP 13360617 ENCODE Processing Pipeline 072b1575e54c5e30ab4887702d239121 https://www.encodeproject.org/files/ENCFF066WUL/@@download/ENCFF066WUL.bigBed GRCh38 released low read depth, antibody characterized with exemption ENCFF616NNR bigBed narrowPeak conservative idr thresholded peaks ENCSR387SYS ChIP-seq EFO:0002067 K562 cell line Homo sapiens DEAF1-human ENCAB698FCU DNA False 2016-03-30 ENCODE 1, 2 ENCFF389KBV 184985 ENCODE Processing Pipeline 352d83f9de8d0d563e90b05c9b7eafed https://www.encodeproject.org/files/ENCFF616NNR/@@download/ENCFF616NNR.bigBed GRCh38 released low read depth, antibody characterized with exemption ENCFF158AZQ bigBed narrowPeak peaks ENCSR387SYS ChIP-seq EFO:0002067 K562 cell line Homo sapiens DEAF1-human ENCAB698FCU DNA False 2016-03-30 ENCODE 1, 2 ENCFF057EGU 13278708 ENCODE Processing Pipeline da08f638085b4a4a42039de3a0b6031e https://www.encodeproject.org/files/ENCFF158AZQ/@@download/ENCFF158AZQ.bigBed GRCh38 released low read depth, antibody characterized with exemption ENCFF389KBV bed narrowPeak conservative idr thresholded peaks ENCSR387SYS ChIP-seq EFO:0002067 K562 cell line Homo sapiens DEAF1-human ENCAB698FCU DNA False 2016-03-30 ENCODE 1, 2 ENCFF057EGU, ENCFF290BUP, ENCFF359CNE, ENCFF419RSJ 61908 ENCODE Processing Pipeline 6053ff17ee44221ef85259f47a011a74 https://www.encodeproject.org/files/ENCFF389KBV/@@download/ENCFF389KBV.bed.gz GRCh38 released low read depth, antibody characterized with exemption ENCFF532HCE bed narrowPeak optimal idr thresholded peaks ENCSR387SYS ChIP-seq EFO:0002067 K562 cell line Homo sapiens DEAF1-human ENCAB698FCU DNA False 2016-03-30 ENCODE 1, 2 ENCFF057EGU, ENCFF290BUP, ENCFF359CNE, ENCFF419RSJ 65861 ENCODE Processing Pipeline 024805d8bbc803eb8d4a9e158fa30823 https://www.encodeproject.org/files/ENCFF532HCE/@@download/ENCFF532HCE.bed.gz GRCh38 released low read depth, antibody characterized with exemption ENCFF669AVV bigBed narrowPeak optimal idr thresholded peaks ENCSR387SYS ChIP-seq EFO:0002067 K562 cell line Homo sapiens DEAF1-human ENCAB698FCU DNA False 2016-03-30 ENCODE 1, 2 ENCFF532HCE 190856 ENCODE Processing Pipeline de882740250df3432f7df96c78875501 https://www.encodeproject.org/files/ENCFF669AVV/@@download/ENCFF669AVV.bigBed GRCh38 released low read depth, antibody characterized with exemption ENCFF445UPX bigWig fold change over control ENCSR387SYS ChIP-seq EFO:0002067 K562 cell line Homo sapiens DEAF1-human ENCAB698FCU DNA False 2016-03-30 ENCODE 2 ENCFF444TNY, ENCFF584YAE, ENCFF847YDJ 818083728 ENCODE Processing Pipeline 853a12834971be03d4e1be8968dc9e3e https://www.encodeproject.org/files/ENCFF445UPX/@@download/ENCFF445UPX.bigWig hg19 released low read depth, antibody characterized with exemption ENCFF875YIA bigWig signal p-value ENCSR387SYS ChIP-seq EFO:0002067 K562 cell line Homo sapiens DEAF1-human ENCAB698FCU DNA False 2016-03-30 ENCODE 2 ENCFF444TNY, ENCFF584YAE, ENCFF847YDJ 965880962 ENCODE Processing Pipeline 985e2b8f618ee6ca4f4d4ba1fead752e https://www.encodeproject.org/files/ENCFF875YIA/@@download/ENCFF875YIA.bigWig hg19 released low read depth, antibody characterized with exemption ENCFF278NVP bigWig signal p-value ENCSR387SYS ChIP-seq EFO:0002067 K562 cell line Homo sapiens DEAF1-human ENCAB698FCU DNA False 2016-03-30 ENCODE 1, 2 ENCFF444TNY, ENCFF584YAE, ENCFF847YDJ, ENCFF875XTU 1206251560 ENCODE Processing Pipeline e95e3ab96070ce10421e30d4ed7b5ed8 https://www.encodeproject.org/files/ENCFF278NVP/@@download/ENCFF278NVP.bigWig hg19 released low read depth, antibody characterized with exemption ENCFF187GTP bigWig fold change over control ENCSR387SYS ChIP-seq EFO:0002067 K562 cell line Homo sapiens DEAF1-human ENCAB698FCU DNA False 2016-03-30 ENCODE 1, 2 ENCFF444TNY, ENCFF584YAE, ENCFF847YDJ, ENCFF875XTU 1113200102 ENCODE Processing Pipeline 4a5f154e7ba674d952b17d67fd5758ae https://www.encodeproject.org/files/ENCFF187GTP/@@download/ENCFF187GTP.bigWig hg19 released low read depth, antibody characterized with exemption ENCFF774DGH bed narrowPeak peaks ENCSR387SYS ChIP-seq EFO:0002067 K562 cell line Homo sapiens DEAF1-human ENCAB698FCU DNA False 2016-03-30 ENCODE 1 ENCFF444TNY, ENCFF847YDJ, ENCFF875XTU 5923453 ENCODE Processing Pipeline 1c68465e3c10cf7ca801edb567c6a1c8 https://www.encodeproject.org/files/ENCFF774DGH/@@download/ENCFF774DGH.bed.gz hg19 released low read depth, antibody characterized with exemption ENCFF659XXQ bigBed narrowPeak peaks ENCSR387SYS ChIP-seq EFO:0002067 K562 cell line Homo sapiens DEAF1-human ENCAB698FCU DNA False 2016-03-30 ENCODE 2 ENCFF433RNR 13413949 ENCODE Processing Pipeline 85e6d67edcc72fc98ffd641e0795d193 https://www.encodeproject.org/files/ENCFF659XXQ/@@download/ENCFF659XXQ.bigBed hg19 released low read depth, antibody characterized with exemption ENCFF433RNR bed narrowPeak peaks ENCSR387SYS ChIP-seq EFO:0002067 K562 cell line Homo sapiens DEAF1-human ENCAB698FCU DNA False 2016-03-30 ENCODE 2 ENCFF444TNY, ENCFF584YAE, ENCFF847YDJ 6188871 ENCODE Processing Pipeline 4f349162fa27939dac8a7fc617b685f9 https://www.encodeproject.org/files/ENCFF433RNR/@@download/ENCFF433RNR.bed.gz hg19 released low read depth, antibody characterized with exemption ENCFF671XXI bed narrowPeak peaks ENCSR387SYS ChIP-seq EFO:0002067 K562 cell line Homo sapiens DEAF1-human ENCAB698FCU DNA False 2016-03-30 ENCODE 1, 2 ENCFF444TNY, ENCFF584YAE, ENCFF847YDJ, ENCFF875XTU 6588901 ENCODE Processing Pipeline 0b32b352d9146441b84ad9468d59806b https://www.encodeproject.org/files/ENCFF671XXI/@@download/ENCFF671XXI.bed.gz hg19 released low read depth, antibody characterized with exemption ENCFF633OQQ bed narrowPeak conservative idr thresholded peaks ENCSR387SYS ChIP-seq EFO:0002067 K562 cell line Homo sapiens DEAF1-human ENCAB698FCU DNA False 2016-03-30 ENCODE 1, 2 ENCFF001TDO, ENCFF433RNR, ENCFF671XXI, ENCFF774DGH 60284 ENCODE Processing Pipeline 04088c209c696a78154ec3e0025ffc50 https://www.encodeproject.org/files/ENCFF633OQQ/@@download/ENCFF633OQQ.bed.gz hg19 released low read depth, antibody characterized with exemption ENCFF862ZWG bigBed narrowPeak conservative idr thresholded peaks ENCSR387SYS ChIP-seq EFO:0002067 K562 cell line Homo sapiens DEAF1-human ENCAB698FCU DNA False 2016-03-30 ENCODE 1, 2 ENCFF633OQQ 180625 ENCODE Processing Pipeline 9e883d2550b9596219c8eed4129d278a https://www.encodeproject.org/files/ENCFF862ZWG/@@download/ENCFF862ZWG.bigBed hg19 released low read depth, antibody characterized with exemption ENCFF786WZD bed narrowPeak optimal idr thresholded peaks ENCSR387SYS ChIP-seq EFO:0002067 K562 cell line Homo sapiens DEAF1-human ENCAB698FCU DNA False 2016-03-30 ENCODE 1, 2 ENCFF001TDO, ENCFF433RNR, ENCFF671XXI, ENCFF774DGH 64933 ENCODE Processing Pipeline 35a9ccfb765df1b979ffba0e21e27919 https://www.encodeproject.org/files/ENCFF786WZD/@@download/ENCFF786WZD.bed.gz hg19 released low read depth, antibody characterized with exemption ENCFF721WXC bigBed narrowPeak peaks ENCSR387SYS ChIP-seq EFO:0002067 K562 cell line Homo sapiens DEAF1-human ENCAB698FCU DNA False 2016-03-30 ENCODE 1 ENCFF774DGH 13340249 ENCODE Processing Pipeline 484b17aae25a943f56c3014296892366 https://www.encodeproject.org/files/ENCFF721WXC/@@download/ENCFF721WXC.bigBed hg19 released low read depth, antibody characterized with exemption ENCFF591JAC bigBed narrowPeak peaks ENCSR387SYS ChIP-seq EFO:0002067 K562 cell line Homo sapiens DEAF1-human ENCAB698FCU DNA False 2016-03-30 ENCODE 1, 2 ENCFF671XXI 13250668 ENCODE Processing Pipeline 901c5e47522d4b08b508b9572bf194f7 https://www.encodeproject.org/files/ENCFF591JAC/@@download/ENCFF591JAC.bigBed hg19 released low read depth, antibody characterized with exemption ENCFF247KGV bigBed narrowPeak optimal idr thresholded peaks ENCSR387SYS ChIP-seq EFO:0002067 K562 cell line Homo sapiens DEAF1-human ENCAB698FCU DNA False 2016-03-30 ENCODE 1, 2 ENCFF786WZD 188381 ENCODE Processing Pipeline c29196eb8f01fb0844c69bb876531356 https://www.encodeproject.org/files/ENCFF247KGV/@@download/ENCFF247KGV.bigBed hg19 released low read depth, antibody characterized with exemption ENCFF000YHT bam alignments ENCSR000EHE ChIP-seq EFO:0002067 K562 cell line Homo sapiens CEBPB-human ENCAB000AFB DNA see document see document False 2011-10-29 ENCODE 2 ENCFF000YID 408992276 Michael Snyder, Stanford e49c3b4e5bce0b2ebf98f950d7364a30 https://www.encodeproject.org/files/ENCFF000YHT/@@download/ENCFF000YHT.bam hg19 archived low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF000YHU bam alignments ENCSR000EHE ChIP-seq EFO:0002067 K562 cell line Homo sapiens CEBPB-human ENCAB000AFB DNA see document see document False 2011-10-29 ENCODE 1 ENCFF000YIC 471162093 Michael Snyder, Stanford 32c11f1c3fd5defea04977bc4043aebd https://www.encodeproject.org/files/ENCFF000YHU/@@download/ENCFF000YHU.bam hg19 archived low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF000YHV bigBed narrowPeak peaks ENCSR000EHE ChIP-seq EFO:0002067 K562 cell line Homo sapiens CEBPB-human ENCAB000AFB DNA see document see document False 2011-10-29 ENCODE ENCFF001VMI 3914136 Michael Snyder, Stanford c70508591a026a563d4cfc49eba7d5ee https://www.encodeproject.org/files/ENCFF000YHV/@@download/ENCFF000YHV.bigBed hg19 archived low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF000YHW bigWig signal ENCSR000EHE ChIP-seq EFO:0002067 K562 cell line Homo sapiens CEBPB-human ENCAB000AFB DNA see document see document False 2011-10-29 ENCODE 323593049 Michael Snyder, Stanford 4c37c4f415e7513d27e190f9020585be https://www.encodeproject.org/files/ENCFF000YHW/@@download/ENCFF000YHW.bigWig hg19 archived low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample, missing derived_from ENCFF000YIC fastq reads ENCSR000EHE ChIP-seq EFO:0002067 K562 cell line Homo sapiens CEBPB-human ENCAB000AFB DNA see document see document False 2011-10-29 ENCODE 1 1 36 single-ended 1037919457 Michael Snyder, Stanford 8ee717ffabf4e447e9a1a60dca388266 https://www.encodeproject.org/files/ENCFF000YIC/@@download/ENCFF000YIC.fastq.gz Illumina Genome Analyzer /files/ENCFF000YRB/ released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF000YID fastq reads ENCSR000EHE ChIP-seq EFO:0002067 K562 cell line Homo sapiens CEBPB-human ENCAB000AFB DNA see document see document False 2011-10-29 ENCODE 2 1 36 single-ended 804878880 Michael Snyder, Stanford 976859bf6db81607a814acaca902a945 https://www.encodeproject.org/files/ENCFF000YID/@@download/ENCFF000YID.fastq.gz Illumina Genome Analyzer /files/ENCFF000YRB/ released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF001VMI bed narrowPeak peaks ENCSR000EHE ChIP-seq EFO:0002067 K562 cell line Homo sapiens CEBPB-human ENCAB000AFB DNA see document see document False 2011-10-29 ENCODE 1882743 Michael Snyder, Stanford ebf5ea511ad1df631c5ff99c4f772e1e https://www.encodeproject.org/files/ENCFF001VMI/@@download/ENCFF001VMI.bed.gz hg19 archived low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample, missing derived_from ENCFF002CVV bed narrowPeak optimal idr thresholded peaks ENCSR000EHE ChIP-seq EFO:0002067 K562 cell line Homo sapiens CEBPB-human ENCAB000AFB DNA see document see document False 2011-10-29 ENCODE 892426 ENCODE Consortium Analysis Working Group 04e3941e0e52a83b13096436c6491a25 https://www.encodeproject.org/files/ENCFF002CVV/@@download/ENCFF002CVV.bed.gz hg19 archived low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample, missing derived_from ENCFF851XOZ bigBed narrowPeak optimal idr thresholded peaks ENCSR000EHE ChIP-seq EFO:0002067 K562 cell line Homo sapiens CEBPB-human ENCAB000AFB DNA see document see document False 2011-10-29 ENCODE ENCFF002CVV 2015807 ENCODE Consortium bfde32b3a79b960201d3b1634c66b404 https://www.encodeproject.org/files/ENCFF851XOZ/@@download/ENCFF851XOZ.bigBed hg19 archived low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF953ZZL bam alignments ENCSR000EHE ChIP-seq EFO:0002067 K562 cell line Homo sapiens CEBPB-human ENCAB000AFB DNA see document see document False 2011-10-29 ENCODE 2 36 ENCFF000YID, ENCFF643CGH 630166655 ENCODE Processing Pipeline ecf3214addf8a76c29bf49c86cb59fdb https://www.encodeproject.org/files/ENCFF953ZZL/@@download/ENCFF953ZZL.bam GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF443POA bam unfiltered alignments ENCSR000EHE ChIP-seq EFO:0002067 K562 cell line Homo sapiens CEBPB-human ENCAB000AFB DNA see document see document False 2011-10-29 ENCODE 2 36 ENCFF000YID, ENCFF643CGH 990153086 ENCODE Processing Pipeline 35e2b16ccf394d65757dce99c2efc1c9 https://www.encodeproject.org/files/ENCFF443POA/@@download/ENCFF443POA.bam GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF763YQX bam unfiltered alignments ENCSR000EHE ChIP-seq EFO:0002067 K562 cell line Homo sapiens CEBPB-human ENCAB000AFB DNA see document see document False 2011-10-29 ENCODE 1 36 ENCFF000YIC, ENCFF643CGH 1239687566 ENCODE Processing Pipeline b0c8eca0d7670f1adaa07b7fa5583a62 https://www.encodeproject.org/files/ENCFF763YQX/@@download/ENCFF763YQX.bam GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF729WGC bam alignments ENCSR000EHE ChIP-seq EFO:0002067 K562 cell line Homo sapiens CEBPB-human ENCAB000AFB DNA see document see document False 2011-10-29 ENCODE 1 36 ENCFF000YIC, ENCFF643CGH 773943061 ENCODE Processing Pipeline 19d08f372ee820620943fde08716d257 https://www.encodeproject.org/files/ENCFF729WGC/@@download/ENCFF729WGC.bam GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF197ZMK bam unfiltered alignments ENCSR000EHE ChIP-seq EFO:0002067 K562 cell line Homo sapiens CEBPB-human ENCAB000AFB DNA see document see document False 2011-10-29 ENCODE 2 36 ENCFF000YID, ENCFF807MUK 985976367 ENCODE Processing Pipeline bad93339f674ebd00d84ceccf736bd57 https://www.encodeproject.org/files/ENCFF197ZMK/@@download/ENCFF197ZMK.bam hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF523MPI bam unfiltered alignments ENCSR000EHE ChIP-seq EFO:0002067 K562 cell line Homo sapiens CEBPB-human ENCAB000AFB DNA see document see document False 2011-10-29 ENCODE 1 36 ENCFF000YIC, ENCFF807MUK 1235094193 ENCODE Processing Pipeline 87bb80b3e81bbbd4d7fcf88ba41d3791 https://www.encodeproject.org/files/ENCFF523MPI/@@download/ENCFF523MPI.bam hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF353LOM bam alignments ENCSR000EHE ChIP-seq EFO:0002067 K562 cell line Homo sapiens CEBPB-human ENCAB000AFB DNA see document see document False 2011-10-29 ENCODE 2 36 ENCFF000YID, ENCFF807MUK 630657167 ENCODE Processing Pipeline 75e46c63419d3254121106b62f82276b https://www.encodeproject.org/files/ENCFF353LOM/@@download/ENCFF353LOM.bam hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF059XPJ bam alignments ENCSR000EHE ChIP-seq EFO:0002067 K562 cell line Homo sapiens CEBPB-human ENCAB000AFB DNA see document see document False 2011-10-29 ENCODE 1 36 ENCFF000YIC, ENCFF807MUK 774450170 ENCODE Processing Pipeline e075cc65f9ae4e7036f8aa1afa7307a4 https://www.encodeproject.org/files/ENCFF059XPJ/@@download/ENCFF059XPJ.bam hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF446IYW bigWig signal p-value ENCSR000EHE ChIP-seq EFO:0002067 K562 cell line Homo sapiens CEBPB-human ENCAB000AFB DNA see document see document False 2011-10-29 ENCODE 1 ENCFF023NGN, ENCFF729WGC 443939847 ENCODE Processing Pipeline 3cf37398515c37ea2f8e69a2915f8afc https://www.encodeproject.org/files/ENCFF446IYW/@@download/ENCFF446IYW.bigWig GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF561NSS bigWig signal p-value ENCSR000EHE ChIP-seq EFO:0002067 K562 cell line Homo sapiens CEBPB-human ENCAB000AFB DNA see document see document False 2011-10-29 ENCODE 2 ENCFF023NGN, ENCFF953ZZL 408808172 ENCODE Processing Pipeline 9041c7eb9a8f6456dbf42c777f33a9dd https://www.encodeproject.org/files/ENCFF561NSS/@@download/ENCFF561NSS.bigWig GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF999NRK bigWig signal p-value ENCSR000EHE ChIP-seq EFO:0002067 K562 cell line Homo sapiens CEBPB-human ENCAB000AFB DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF023NGN, ENCFF729WGC, ENCFF953ZZL 526689549 ENCODE Processing Pipeline 3b36966e35b4afea3c3cd535a9b86a83 https://www.encodeproject.org/files/ENCFF999NRK/@@download/ENCFF999NRK.bigWig GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF966BXU bigWig fold change over control ENCSR000EHE ChIP-seq EFO:0002067 K562 cell line Homo sapiens CEBPB-human ENCAB000AFB DNA see document see document False 2011-10-29 ENCODE 1 ENCFF023NGN, ENCFF729WGC 386570850 ENCODE Processing Pipeline 6d2522806670bd4238620481aef35979 https://www.encodeproject.org/files/ENCFF966BXU/@@download/ENCFF966BXU.bigWig GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF430NNH bigWig fold change over control ENCSR000EHE ChIP-seq EFO:0002067 K562 cell line Homo sapiens CEBPB-human ENCAB000AFB DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF023NGN, ENCFF729WGC, ENCFF953ZZL 618527139 ENCODE Processing Pipeline 33a35ab99d2a83d0334e4d169b8911aa https://www.encodeproject.org/files/ENCFF430NNH/@@download/ENCFF430NNH.bigWig GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF028EKK bigWig fold change over control ENCSR000EHE ChIP-seq EFO:0002067 K562 cell line Homo sapiens CEBPB-human ENCAB000AFB DNA see document see document False 2011-10-29 ENCODE 2 ENCFF023NGN, ENCFF953ZZL 350892026 ENCODE Processing Pipeline d829897614f4f5dde5b4d3e6da93bba5 https://www.encodeproject.org/files/ENCFF028EKK/@@download/ENCFF028EKK.bigWig GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF055JYQ bed narrowPeak peaks ENCSR000EHE ChIP-seq EFO:0002067 K562 cell line Homo sapiens CEBPB-human ENCAB000AFB DNA see document see document False 2011-10-29 ENCODE 1 ENCFF023NGN, ENCFF729WGC 5039609 ENCODE Processing Pipeline 4d5e2f4ec418809660c03ea8aae3364d https://www.encodeproject.org/files/ENCFF055JYQ/@@download/ENCFF055JYQ.bed.gz GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF174YEH bed narrowPeak peaks ENCSR000EHE ChIP-seq EFO:0002067 K562 cell line Homo sapiens CEBPB-human ENCAB000AFB DNA see document see document False 2011-10-29 ENCODE 2 ENCFF023NGN, ENCFF953ZZL 5026150 ENCODE Processing Pipeline 2fc56ee9649c16389f5b9cf74edc0288 https://www.encodeproject.org/files/ENCFF174YEH/@@download/ENCFF174YEH.bed.gz GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF359XDS bigBed narrowPeak peaks ENCSR000EHE ChIP-seq EFO:0002067 K562 cell line Homo sapiens CEBPB-human ENCAB000AFB DNA see document see document False 2011-10-29 ENCODE 1 ENCFF055JYQ 11210210 ENCODE Processing Pipeline 156c65b28ff18edfbeac37d4e505bcae https://www.encodeproject.org/files/ENCFF359XDS/@@download/ENCFF359XDS.bigBed GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF817MVX bed narrowPeak peaks ENCSR000EHE ChIP-seq EFO:0002067 K562 cell line Homo sapiens CEBPB-human ENCAB000AFB DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF023NGN, ENCFF729WGC, ENCFF953ZZL 5902996 ENCODE Processing Pipeline 2320eb5e619ab2ec8e58bb429751dbf7 https://www.encodeproject.org/files/ENCFF817MVX/@@download/ENCFF817MVX.bed.gz GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF321KQD bed narrowPeak optimal idr thresholded peaks ENCSR000EHE ChIP-seq EFO:0002067 K562 cell line Homo sapiens CEBPB-human ENCAB000AFB DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF055JYQ, ENCFF174YEH, ENCFF419RSJ, ENCFF817MVX 765147 ENCODE Processing Pipeline 7eefd24d34e7e7022be375a336f82ac8 https://www.encodeproject.org/files/ENCFF321KQD/@@download/ENCFF321KQD.bed.gz GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF196UZE bed narrowPeak conservative idr thresholded peaks ENCSR000EHE ChIP-seq EFO:0002067 K562 cell line Homo sapiens CEBPB-human ENCAB000AFB DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF055JYQ, ENCFF174YEH, ENCFF419RSJ, ENCFF817MVX 720168 ENCODE Processing Pipeline 013ff1a9b0eea71e032c73043ad273db https://www.encodeproject.org/files/ENCFF196UZE/@@download/ENCFF196UZE.bed.gz GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF158KRK bigBed narrowPeak conservative idr thresholded peaks ENCSR000EHE ChIP-seq EFO:0002067 K562 cell line Homo sapiens CEBPB-human ENCAB000AFB DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF196UZE 1209675 ENCODE Processing Pipeline c8403ec13e48b12b87d387194fc27a4a https://www.encodeproject.org/files/ENCFF158KRK/@@download/ENCFF158KRK.bigBed GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF185NME bigBed narrowPeak peaks ENCSR000EHE ChIP-seq EFO:0002067 K562 cell line Homo sapiens CEBPB-human ENCAB000AFB DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF817MVX 11512813 ENCODE Processing Pipeline d614e5796c80df5042c8ce875d7720e2 https://www.encodeproject.org/files/ENCFF185NME/@@download/ENCFF185NME.bigBed GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF848UKQ bigBed narrowPeak peaks ENCSR000EHE ChIP-seq EFO:0002067 K562 cell line Homo sapiens CEBPB-human ENCAB000AFB DNA see document see document False 2011-10-29 ENCODE 2 ENCFF174YEH 11078112 ENCODE Processing Pipeline 0a6b8e06eee32ee44b37bcc2318ecc23 https://www.encodeproject.org/files/ENCFF848UKQ/@@download/ENCFF848UKQ.bigBed GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF111OHC bigBed narrowPeak optimal idr thresholded peaks ENCSR000EHE ChIP-seq EFO:0002067 K562 cell line Homo sapiens CEBPB-human ENCAB000AFB DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF321KQD 1266751 ENCODE Processing Pipeline b1b53d397280a42b4c495fac4d97489f https://www.encodeproject.org/files/ENCFF111OHC/@@download/ENCFF111OHC.bigBed GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF206GZD bigWig signal p-value ENCSR000EHE ChIP-seq EFO:0002067 K562 cell line Homo sapiens CEBPB-human ENCAB000AFB DNA see document see document False 2011-10-29 ENCODE 2 ENCFF353LOM, ENCFF710NTS 419966993 ENCODE Processing Pipeline bfe9223038c3e40de408232c9d564c59 https://www.encodeproject.org/files/ENCFF206GZD/@@download/ENCFF206GZD.bigWig hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF206BMO bed narrowPeak peaks ENCSR000EHE ChIP-seq EFO:0002067 K562 cell line Homo sapiens CEBPB-human ENCAB000AFB DNA see document see document False 2011-10-29 ENCODE 1 ENCFF059XPJ, ENCFF710NTS 5056575 ENCODE Processing Pipeline b4656163d89caf96eaf4861a3a13b877 https://www.encodeproject.org/files/ENCFF206BMO/@@download/ENCFF206BMO.bed.gz hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF766JMB bigWig fold change over control ENCSR000EHE ChIP-seq EFO:0002067 K562 cell line Homo sapiens CEBPB-human ENCAB000AFB DNA see document see document False 2011-10-29 ENCODE 1 ENCFF059XPJ, ENCFF710NTS 384269122 ENCODE Processing Pipeline 5d2f7987412539243b58a4ac4ab205f8 https://www.encodeproject.org/files/ENCFF766JMB/@@download/ENCFF766JMB.bigWig hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF096JSS bigWig fold change over control ENCSR000EHE ChIP-seq EFO:0002067 K562 cell line Homo sapiens CEBPB-human ENCAB000AFB DNA see document see document False 2011-10-29 ENCODE 2 ENCFF353LOM, ENCFF710NTS 350196524 ENCODE Processing Pipeline 38262b8666e01a70e6b50cc4ec9b6ffa https://www.encodeproject.org/files/ENCFF096JSS/@@download/ENCFF096JSS.bigWig hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF755NTM bed narrowPeak peaks ENCSR000EHE ChIP-seq EFO:0002067 K562 cell line Homo sapiens CEBPB-human ENCAB000AFB DNA see document see document False 2011-10-29 ENCODE 2 ENCFF353LOM, ENCFF710NTS 4992247 ENCODE Processing Pipeline 50117195db5af85c352e3c74b5c52af5 https://www.encodeproject.org/files/ENCFF755NTM/@@download/ENCFF755NTM.bed.gz hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF143EHM bed narrowPeak peaks ENCSR000EHE ChIP-seq EFO:0002067 K562 cell line Homo sapiens CEBPB-human ENCAB000AFB DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF059XPJ, ENCFF353LOM, ENCFF710NTS 5927380 ENCODE Processing Pipeline 88d7cb6ea70b61b2080caa85ae611e97 https://www.encodeproject.org/files/ENCFF143EHM/@@download/ENCFF143EHM.bed.gz hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF819GCB bed narrowPeak conservative idr thresholded peaks ENCSR000EHE ChIP-seq EFO:0002067 K562 cell line Homo sapiens CEBPB-human ENCAB000AFB DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF001TDO, ENCFF143EHM, ENCFF206BMO, ENCFF755NTM 725058 ENCODE Processing Pipeline 7e414ea9b397b8798ce1f8fb535b1845 https://www.encodeproject.org/files/ENCFF819GCB/@@download/ENCFF819GCB.bed.gz hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF446NGE bigBed narrowPeak conservative idr thresholded peaks ENCSR000EHE ChIP-seq EFO:0002067 K562 cell line Homo sapiens CEBPB-human ENCAB000AFB DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF819GCB 1212438 ENCODE Processing Pipeline c1a5064e9990165bcde061e3248af601 https://www.encodeproject.org/files/ENCFF446NGE/@@download/ENCFF446NGE.bigBed hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF429XKT bed narrowPeak optimal idr thresholded peaks ENCSR000EHE ChIP-seq EFO:0002067 K562 cell line Homo sapiens CEBPB-human ENCAB000AFB DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF001TDO, ENCFF143EHM, ENCFF206BMO, ENCFF755NTM 766395 ENCODE Processing Pipeline 88c12b16ffd687378e1854b5f80644c8 https://www.encodeproject.org/files/ENCFF429XKT/@@download/ENCFF429XKT.bed.gz hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF017NCS bigBed narrowPeak optimal idr thresholded peaks ENCSR000EHE ChIP-seq EFO:0002067 K562 cell line Homo sapiens CEBPB-human ENCAB000AFB DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF429XKT 1265144 ENCODE Processing Pipeline 90fe163ef22a44b717b791975902c770 https://www.encodeproject.org/files/ENCFF017NCS/@@download/ENCFF017NCS.bigBed hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF372CSD bigWig signal p-value ENCSR000EHE ChIP-seq EFO:0002067 K562 cell line Homo sapiens CEBPB-human ENCAB000AFB DNA see document see document False 2011-10-29 ENCODE 1 ENCFF059XPJ, ENCFF710NTS 546137441 ENCODE Processing Pipeline 67b9f7d5b2b2d5ca7af99d5ba65162cd https://www.encodeproject.org/files/ENCFF372CSD/@@download/ENCFF372CSD.bigWig hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF048SXS bigWig signal p-value ENCSR000EHE ChIP-seq EFO:0002067 K562 cell line Homo sapiens CEBPB-human ENCAB000AFB DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF059XPJ, ENCFF353LOM, ENCFF710NTS 527159045 ENCODE Processing Pipeline b30ab55b8600abb1c2a74de6b6b2b34b https://www.encodeproject.org/files/ENCFF048SXS/@@download/ENCFF048SXS.bigWig hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF513ZML bigWig fold change over control ENCSR000EHE ChIP-seq EFO:0002067 K562 cell line Homo sapiens CEBPB-human ENCAB000AFB DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF059XPJ, ENCFF353LOM, ENCFF710NTS 618353754 ENCODE Processing Pipeline 3ffdf17a5525eb7479cf1c2028628c4a https://www.encodeproject.org/files/ENCFF513ZML/@@download/ENCFF513ZML.bigWig hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF891UWD bigBed narrowPeak peaks ENCSR000EHE ChIP-seq EFO:0002067 K562 cell line Homo sapiens CEBPB-human ENCAB000AFB DNA see document see document False 2011-10-29 ENCODE 1 ENCFF206BMO 11220949 ENCODE Processing Pipeline cabf14c7aad07d13757c305705d4bebe https://www.encodeproject.org/files/ENCFF891UWD/@@download/ENCFF891UWD.bigBed hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF394XAF bigBed narrowPeak peaks ENCSR000EHE ChIP-seq EFO:0002067 K562 cell line Homo sapiens CEBPB-human ENCAB000AFB DNA see document see document False 2011-10-29 ENCODE 2 ENCFF755NTM 11032435 ENCODE Processing Pipeline cd5bbf137b66e890036959248b826f25 https://www.encodeproject.org/files/ENCFF394XAF/@@download/ENCFF394XAF.bigBed hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF013VFZ bigBed narrowPeak peaks ENCSR000EHE ChIP-seq EFO:0002067 K562 cell line Homo sapiens CEBPB-human ENCAB000AFB DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF143EHM 11506701 ENCODE Processing Pipeline 8482b617c82aad8c3e16b3e41724d97b https://www.encodeproject.org/files/ENCFF013VFZ/@@download/ENCFF013VFZ.bigBed hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF040TFY bam unfiltered alignments ENCSR847LBF ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-FOXJ2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 50 ENCFF218BEJ, ENCFF807MUK 1174264584 ENCODE Processing Pipeline 6a56c3bb7c63baae1b690750cb571517 https://www.encodeproject.org/files/ENCFF040TFY/@@download/ENCFF040TFY.bam hg19 released control low read depth, low read depth, missing genetic modification characterization ENCFF609DET bam unfiltered alignments ENCSR847LBF ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-FOXJ2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 50 ENCFF432PNM, ENCFF807MUK 1458644765 ENCODE Processing Pipeline 78072bab44879f2a966eb7ccc40cbba5 https://www.encodeproject.org/files/ENCFF609DET/@@download/ENCFF609DET.bam hg19 released control low read depth, low read depth, missing genetic modification characterization ENCFF218BEJ fastq reads ENCSR847LBF ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-FOXJ2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 1 50 single-ended 1099354219 Kevin White, UChicago f7d4020fa449d0400bfd836477b8722c SRA:SRR6214155 https://www.encodeproject.org/files/ENCFF218BEJ/@@download/ENCFF218BEJ.fastq.gz Illumina HiSeq 2000 /files/ENCFF890NEW/ released control low read depth, low read depth, missing genetic modification characterization ENCFF432PNM fastq reads ENCSR847LBF ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-FOXJ2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 1 50 single-ended 1368859858 Kevin White, UChicago 833dc5a349292d954912cfef23c91b41 SRA:SRR6214156 https://www.encodeproject.org/files/ENCFF432PNM/@@download/ENCFF432PNM.fastq.gz Illumina HiSeq 2500 /files/ENCFF890NEW/ released control low read depth, low read depth, missing genetic modification characterization ENCFF268SHC bam alignments ENCSR847LBF ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-FOXJ2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 50 ENCFF218BEJ, ENCFF807MUK 891689288 ENCODE Processing Pipeline 1096b47f48f7befd110a0351b9ecc2a1 https://www.encodeproject.org/files/ENCFF268SHC/@@download/ENCFF268SHC.bam hg19 released control low read depth, low read depth, missing genetic modification characterization ENCFF878ETO bam alignments ENCSR847LBF ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-FOXJ2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 50 ENCFF432PNM, ENCFF807MUK 1111497884 ENCODE Processing Pipeline f447ac10254a5e68e9ba27984f007dc0 https://www.encodeproject.org/files/ENCFF878ETO/@@download/ENCFF878ETO.bam hg19 released control low read depth, low read depth, missing genetic modification characterization ENCFF499PQM bigWig fold change over control ENCSR847LBF ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-FOXJ2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF064YUE, ENCFF878ETO 413218209 ENCODE Processing Pipeline 401a60a0b59cc6f208b2b261f267e115 https://www.encodeproject.org/files/ENCFF499PQM/@@download/ENCFF499PQM.bigWig hg19 released control low read depth, low read depth, missing genetic modification characterization ENCFF658PJX bigWig fold change over control ENCSR847LBF ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-FOXJ2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF064YUE, ENCFF268SHC, ENCFF878ETO 649752340 ENCODE Processing Pipeline a4490f092bdf85e87cffc4451ce63bce https://www.encodeproject.org/files/ENCFF658PJX/@@download/ENCFF658PJX.bigWig hg19 released control low read depth, low read depth, missing genetic modification characterization ENCFF863KXR bigBed narrowPeak peaks ENCSR847LBF ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-FOXJ2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF521WEX 12996775 ENCODE Processing Pipeline 0f7483bd9f81a3ba94f87ac86078dc6f https://www.encodeproject.org/files/ENCFF863KXR/@@download/ENCFF863KXR.bigBed hg19 released control low read depth, low read depth, missing genetic modification characterization ENCFF162HSS bigWig signal p-value ENCSR847LBF ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-FOXJ2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF064YUE, ENCFF878ETO 257078785 ENCODE Processing Pipeline 173732932033cfc0d13555f4d9c05ed5 https://www.encodeproject.org/files/ENCFF162HSS/@@download/ENCFF162HSS.bigWig hg19 released control low read depth, low read depth, missing genetic modification characterization ENCFF521WEX bed narrowPeak peaks ENCSR847LBF ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-FOXJ2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF064YUE, ENCFF268SHC 5731296 ENCODE Processing Pipeline 47f9f3c9fef8c244efac26f3a0b12900 https://www.encodeproject.org/files/ENCFF521WEX/@@download/ENCFF521WEX.bed.gz hg19 released control low read depth, low read depth, missing genetic modification characterization ENCFF629GGT bed narrowPeak peaks ENCSR847LBF ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-FOXJ2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF064YUE, ENCFF878ETO 5713700 ENCODE Processing Pipeline a321149a06867510cb81062207589609 https://www.encodeproject.org/files/ENCFF629GGT/@@download/ENCFF629GGT.bed.gz hg19 released control low read depth, low read depth, missing genetic modification characterization ENCFF639WQU bed narrowPeak peaks ENCSR847LBF ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-FOXJ2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF064YUE, ENCFF268SHC, ENCFF878ETO 6409135 ENCODE Processing Pipeline 878d8b59cd7b47cfe4587112875e991e https://www.encodeproject.org/files/ENCFF639WQU/@@download/ENCFF639WQU.bed.gz hg19 released control low read depth, low read depth, missing genetic modification characterization ENCFF591EKJ bigWig signal p-value ENCSR847LBF ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-FOXJ2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF064YUE, ENCFF268SHC, ENCFF878ETO 247101644 ENCODE Processing Pipeline 1fec3c8113e7cd830c440398f37174b4 https://www.encodeproject.org/files/ENCFF591EKJ/@@download/ENCFF591EKJ.bigWig hg19 released control low read depth, low read depth, missing genetic modification characterization ENCFF408SRM bigWig fold change over control ENCSR847LBF ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-FOXJ2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF064YUE, ENCFF268SHC 352797128 ENCODE Processing Pipeline 58b211d06959fceb1985394162d9fb4d https://www.encodeproject.org/files/ENCFF408SRM/@@download/ENCFF408SRM.bigWig hg19 released control low read depth, low read depth, missing genetic modification characterization ENCFF059MFA bigBed narrowPeak peaks ENCSR847LBF ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-FOXJ2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF629GGT 12871815 ENCODE Processing Pipeline 3ef2f20fcc58e5c240da4504e00fc0aa https://www.encodeproject.org/files/ENCFF059MFA/@@download/ENCFF059MFA.bigBed hg19 released control low read depth, low read depth, missing genetic modification characterization ENCFF300PFA bigWig signal p-value ENCSR847LBF ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-FOXJ2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF064YUE, ENCFF268SHC 275170210 ENCODE Processing Pipeline bc47467ce93925d77f80233e48dd0f3d https://www.encodeproject.org/files/ENCFF300PFA/@@download/ENCFF300PFA.bigWig hg19 released control low read depth, low read depth, missing genetic modification characterization ENCFF578ICV bigBed narrowPeak peaks ENCSR847LBF ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-FOXJ2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF639WQU 12807731 ENCODE Processing Pipeline e92e1fdc2d6287e34301760bb7d8e93d https://www.encodeproject.org/files/ENCFF578ICV/@@download/ENCFF578ICV.bigBed hg19 released control low read depth, low read depth, missing genetic modification characterization ENCFF676CZX bam unfiltered alignments ENCSR847LBF ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-FOXJ2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 50 ENCFF218BEJ, ENCFF643CGH 1179061413 ENCODE Processing Pipeline 6b2cffcf614390b80ca94d46ed258c12 https://www.encodeproject.org/files/ENCFF676CZX/@@download/ENCFF676CZX.bam GRCh38 released control low read depth, low read depth, missing genetic modification characterization ENCFF281VJS bam unfiltered alignments ENCSR847LBF ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-FOXJ2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 50 ENCFF432PNM, ENCFF643CGH 1464458957 ENCODE Processing Pipeline 4249912ba9b7c323a28c82e82bd8436e https://www.encodeproject.org/files/ENCFF281VJS/@@download/ENCFF281VJS.bam GRCh38 released control low read depth, low read depth, missing genetic modification characterization ENCFF834YLT bam alignments ENCSR847LBF ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-FOXJ2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 50 ENCFF218BEJ, ENCFF643CGH 891319891 ENCODE Processing Pipeline 5ea822399507f8a5920a0175901a753f https://www.encodeproject.org/files/ENCFF834YLT/@@download/ENCFF834YLT.bam GRCh38 released control low read depth, low read depth, missing genetic modification characterization ENCFF904PBR bam alignments ENCSR847LBF ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-FOXJ2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 50 ENCFF432PNM, ENCFF643CGH 1110981804 ENCODE Processing Pipeline aa47149b65fc5cebb2a45f26dcd88279 https://www.encodeproject.org/files/ENCFF904PBR/@@download/ENCFF904PBR.bam GRCh38 released control low read depth, low read depth, missing genetic modification characterization ENCFF764UNF bigWig fold change over control ENCSR847LBF ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-FOXJ2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF358ZBU, ENCFF834YLT 351817594 ENCODE Processing Pipeline 695f27ccdda395bb0a36d2daf03d1bcd https://www.encodeproject.org/files/ENCFF764UNF/@@download/ENCFF764UNF.bigWig GRCh38 released control low read depth, low read depth, missing genetic modification characterization ENCFF559IVA bigWig signal p-value ENCSR847LBF ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-FOXJ2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF358ZBU, ENCFF834YLT 274571508 ENCODE Processing Pipeline b858dc039196090d7b9723bc0a8f9410 https://www.encodeproject.org/files/ENCFF559IVA/@@download/ENCFF559IVA.bigWig GRCh38 released control low read depth, low read depth, missing genetic modification characterization ENCFF273YYT bigWig signal p-value ENCSR847LBF ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-FOXJ2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF358ZBU, ENCFF834YLT, ENCFF904PBR 243971116 ENCODE Processing Pipeline 453de86dd080e37523f50361b4a58977 https://www.encodeproject.org/files/ENCFF273YYT/@@download/ENCFF273YYT.bigWig GRCh38 released control low read depth, low read depth, missing genetic modification characterization ENCFF586HHM bigWig signal p-value ENCSR847LBF ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-FOXJ2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF358ZBU, ENCFF904PBR 257965170 ENCODE Processing Pipeline ee26ea807043a720442647011f6c9903 https://www.encodeproject.org/files/ENCFF586HHM/@@download/ENCFF586HHM.bigWig GRCh38 released control low read depth, low read depth, missing genetic modification characterization ENCFF054OME bigWig fold change over control ENCSR847LBF ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-FOXJ2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF358ZBU, ENCFF904PBR 415651421 ENCODE Processing Pipeline b1b4c540a5d3c9297583fe737dada3e3 https://www.encodeproject.org/files/ENCFF054OME/@@download/ENCFF054OME.bigWig GRCh38 released control low read depth, low read depth, missing genetic modification characterization ENCFF388NFD bigWig fold change over control ENCSR847LBF ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-FOXJ2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF358ZBU, ENCFF834YLT, ENCFF904PBR 646643160 ENCODE Processing Pipeline fcd983e3841cd44d5652f78fb2a44686 https://www.encodeproject.org/files/ENCFF388NFD/@@download/ENCFF388NFD.bigWig GRCh38 released control low read depth, low read depth, missing genetic modification characterization ENCFF687WBD bed narrowPeak peaks ENCSR847LBF ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-FOXJ2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF358ZBU, ENCFF834YLT 5521674 ENCODE Processing Pipeline 9fb037ae36e9c53e3b6155356816f47a https://www.encodeproject.org/files/ENCFF687WBD/@@download/ENCFF687WBD.bed.gz GRCh38 released control low read depth, low read depth, missing genetic modification characterization ENCFF317MIF bigBed narrowPeak peaks ENCSR847LBF ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-FOXJ2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF398CHE 12809299 ENCODE Processing Pipeline 38d36513713da4f6283ed5b26bede768 https://www.encodeproject.org/files/ENCFF317MIF/@@download/ENCFF317MIF.bigBed GRCh38 released control low read depth, low read depth, missing genetic modification characterization ENCFF649WHI bed narrowPeak peaks ENCSR847LBF ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-FOXJ2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF358ZBU, ENCFF904PBR 5495080 ENCODE Processing Pipeline 97c876afe1382a8e9c20e29de7d21e76 https://www.encodeproject.org/files/ENCFF649WHI/@@download/ENCFF649WHI.bed.gz GRCh38 released control low read depth, low read depth, missing genetic modification characterization ENCFF398CHE bed narrowPeak peaks ENCSR847LBF ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-FOXJ2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF358ZBU, ENCFF834YLT, ENCFF904PBR 6220193 ENCODE Processing Pipeline d33660160eefc5aca7140116c8d000f4 https://www.encodeproject.org/files/ENCFF398CHE/@@download/ENCFF398CHE.bed.gz GRCh38 released control low read depth, low read depth, missing genetic modification characterization ENCFF835IDR bigBed narrowPeak peaks ENCSR847LBF ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-FOXJ2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF649WHI 12819067 ENCODE Processing Pipeline 9524bbb9c956ff86bb02b2a0a0b59a6d https://www.encodeproject.org/files/ENCFF835IDR/@@download/ENCFF835IDR.bigBed GRCh38 released control low read depth, low read depth, missing genetic modification characterization ENCFF175IUD bed narrowPeak optimal idr thresholded peaks ENCSR847LBF ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-FOXJ2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF398CHE, ENCFF419RSJ, ENCFF649WHI, ENCFF687WBD 276928 ENCODE Processing Pipeline b3eac9d896ea336fa10a26c381005680 https://www.encodeproject.org/files/ENCFF175IUD/@@download/ENCFF175IUD.bed.gz GRCh38 released control low read depth, low read depth, missing genetic modification characterization ENCFF945PNA bigBed narrowPeak peaks ENCSR847LBF ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-FOXJ2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF687WBD 12934341 ENCODE Processing Pipeline 1ef27883317f34b997f0b1391e966ba0 https://www.encodeproject.org/files/ENCFF945PNA/@@download/ENCFF945PNA.bigBed GRCh38 released control low read depth, low read depth, missing genetic modification characterization ENCFF965DFV bigBed narrowPeak optimal idr thresholded peaks ENCSR847LBF ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-FOXJ2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF175IUD 567818 ENCODE Processing Pipeline 7764da83af8a6fb3c264a2fe6ba7c9e2 https://www.encodeproject.org/files/ENCFF965DFV/@@download/ENCFF965DFV.bigBed GRCh38 released control low read depth, low read depth, missing genetic modification characterization ENCFF452SPE bed narrowPeak optimal idr thresholded peaks ENCSR847LBF ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-FOXJ2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF001TDO, ENCFF521WEX, ENCFF629GGT, ENCFF639WQU 235803 ENCODE Processing Pipeline 7c83d0cc8201d650834cf642030fa17c https://www.encodeproject.org/files/ENCFF452SPE/@@download/ENCFF452SPE.bed.gz hg19 released control low read depth, low read depth, missing genetic modification characterization ENCFF797AAQ bed narrowPeak conservative idr thresholded peaks ENCSR847LBF ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-FOXJ2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF001TDO, ENCFF521WEX, ENCFF629GGT, ENCFF639WQU 225949 ENCODE Processing Pipeline 6e88bb45e6fc9cfcfe210b7a58aef722 https://www.encodeproject.org/files/ENCFF797AAQ/@@download/ENCFF797AAQ.bed.gz hg19 released control low read depth, low read depth, missing genetic modification characterization ENCFF195AVK bigBed narrowPeak conservative idr thresholded peaks ENCSR847LBF ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-FOXJ2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF797AAQ 400996 ENCODE Processing Pipeline e2f7c04fa66698ef7c23bc71e5ba1b19 https://www.encodeproject.org/files/ENCFF195AVK/@@download/ENCFF195AVK.bigBed hg19 released control low read depth, low read depth, missing genetic modification characterization ENCFF498WQS bigBed narrowPeak optimal idr thresholded peaks ENCSR847LBF ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-FOXJ2-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF452SPE 412519 ENCODE Processing Pipeline 0161b75881cf7c4b1c7e42a87f62eeb8 https://www.encodeproject.org/files/ENCFF498WQS/@@download/ENCFF498WQS.bigBed hg19 released control low read depth, low read depth, missing genetic modification characterization ENCFF329ODS fastq reads ENCSR162IEM ChIP-seq EFO:0002067 K562 cell line Homo sapiens MYBL2-human ENCAB572QGE DNA False 2017-08-25 ENCODE 1 1 100 paired-ended 1 ENCFF765DMW 5876029854 Michael Snyder, Stanford 542f1851ce89d2daeb7fe59d007ebb31 SRA:SRR6212868 https://www.encodeproject.org/files/ENCFF329ODS/@@download/ENCFF329ODS.fastq.gz Illumina HiSeq 4000 /files/ENCFF498JMO/ released borderline replicate concordance, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF034VXG fastq reads ENCSR162IEM ChIP-seq EFO:0002067 K562 cell line Homo sapiens MYBL2-human ENCAB572QGE DNA False 2017-08-25 ENCODE 2 1 100 paired-ended 1 ENCFF602OUR 1391037917 Michael Snyder, Stanford eeec537b107fb564c4f8c77942e85937 https://www.encodeproject.org/files/ENCFF034VXG/@@download/ENCFF034VXG.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFD/ archived borderline replicate concordance, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF765DMW fastq reads ENCSR162IEM ChIP-seq EFO:0002067 K562 cell line Homo sapiens MYBL2-human ENCAB572QGE DNA False 2017-08-25 ENCODE 1 1 100 paired-ended 2 ENCFF329ODS 6211598241 Michael Snyder, Stanford 2e88847e24e49a61e93ccbc84def8c25 SRA:SRR6212868 https://www.encodeproject.org/files/ENCFF765DMW/@@download/ENCFF765DMW.fastq.gz Illumina HiSeq 4000 /files/ENCFF502GTS/ released borderline replicate concordance, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF602OUR fastq reads ENCSR162IEM ChIP-seq EFO:0002067 K562 cell line Homo sapiens MYBL2-human ENCAB572QGE DNA False 2017-08-25 ENCODE 2 1 100 paired-ended 2 ENCFF034VXG 1452289674 Michael Snyder, Stanford 181c723888d49d1d11e61f679f493578 https://www.encodeproject.org/files/ENCFF602OUR/@@download/ENCFF602OUR.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFA/ archived borderline replicate concordance, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF570QCN fastq reads ENCSR162IEM ChIP-seq EFO:0002067 K562 cell line Homo sapiens MYBL2-human ENCAB572QGE DNA False 2017-08-25 ENCODE 2 1 100 paired-ended 1 ENCFF591FAA 1670088924 Michael Snyder, Stanford 93fa012c3ebfad02e6d214efd6d81956 SRA:SRR6212867 https://www.encodeproject.org/files/ENCFF570QCN/@@download/ENCFF570QCN.fastq.gz Illumina HiSeq 4000 /files/ENCFF259GQA/ released borderline replicate concordance, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF591FAA fastq reads ENCSR162IEM ChIP-seq EFO:0002067 K562 cell line Homo sapiens MYBL2-human ENCAB572QGE DNA False 2017-08-25 ENCODE 2 1 100 paired-ended 2 ENCFF570QCN 1755750392 Michael Snyder, Stanford b00cbbc2641350f80d58e79f23ebf06f SRA:SRR6212867 https://www.encodeproject.org/files/ENCFF591FAA/@@download/ENCFF591FAA.fastq.gz Illumina HiSeq 4000 /files/ENCFF837MIV/ released borderline replicate concordance, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF614RJJ bam unfiltered alignments ENCSR162IEM ChIP-seq EFO:0002067 K562 cell line Homo sapiens MYBL2-human ENCAB572QGE DNA False 2017-08-25 ENCODE 2 100 ENCFF570QCN, ENCFF591FAA, ENCFF643CGH 3338320690 ENCODE Processing Pipeline f36f67cfef5b96dbb893b9517857da84 https://www.encodeproject.org/files/ENCFF614RJJ/@@download/ENCFF614RJJ.bam GRCh38 released borderline replicate concordance, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF591ADX bam alignments ENCSR162IEM ChIP-seq EFO:0002067 K562 cell line Homo sapiens MYBL2-human ENCAB572QGE DNA False 2017-08-25 ENCODE 2 100 ENCFF570QCN, ENCFF591FAA, ENCFF643CGH 2200964526 ENCODE Processing Pipeline b294025b4df044322a1a4f5c7723582b https://www.encodeproject.org/files/ENCFF591ADX/@@download/ENCFF591ADX.bam GRCh38 released borderline replicate concordance, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF246FRM bam unfiltered alignments ENCSR162IEM ChIP-seq EFO:0002067 K562 cell line Homo sapiens MYBL2-human ENCAB572QGE DNA False 2017-08-25 ENCODE 1 100 ENCFF329ODS, ENCFF643CGH, ENCFF765DMW 10975821658 ENCODE Processing Pipeline 68bc2e41256f6c94c9aeb2770c2549f4 https://www.encodeproject.org/files/ENCFF246FRM/@@download/ENCFF246FRM.bam GRCh38 released borderline replicate concordance, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF298ZEH bam alignments ENCSR162IEM ChIP-seq EFO:0002067 K562 cell line Homo sapiens MYBL2-human ENCAB572QGE DNA False 2017-08-25 ENCODE 1 100 ENCFF329ODS, ENCFF643CGH, ENCFF765DMW 8472199953 ENCODE Processing Pipeline f35264dacba4002a41074efa78eae0f0 https://www.encodeproject.org/files/ENCFF298ZEH/@@download/ENCFF298ZEH.bam GRCh38 released borderline replicate concordance, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF589UVH bam unfiltered alignments ENCSR162IEM ChIP-seq EFO:0002067 K562 cell line Homo sapiens MYBL2-human ENCAB572QGE DNA False 2017-08-25 ENCODE 2 100 ENCFF570QCN, ENCFF591FAA, ENCFF807MUK 3335936132 ENCODE Processing Pipeline 26996c7b7e2b801907c447feafa340db https://www.encodeproject.org/files/ENCFF589UVH/@@download/ENCFF589UVH.bam hg19 released borderline replicate concordance, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF700FUA bam alignments ENCSR162IEM ChIP-seq EFO:0002067 K562 cell line Homo sapiens MYBL2-human ENCAB572QGE DNA False 2017-08-25 ENCODE 2 100 ENCFF570QCN, ENCFF591FAA, ENCFF807MUK 2199500520 ENCODE Processing Pipeline d6df4f60b00a578dc30a571490c6b9d6 https://www.encodeproject.org/files/ENCFF700FUA/@@download/ENCFF700FUA.bam hg19 released borderline replicate concordance, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF687RIS bam unfiltered alignments ENCSR162IEM ChIP-seq EFO:0002067 K562 cell line Homo sapiens MYBL2-human ENCAB572QGE DNA False 2017-08-25 ENCODE 1 100 ENCFF329ODS, ENCFF765DMW, ENCFF807MUK 10963680166 ENCODE Processing Pipeline 47f190e2613d00b02899c798916ae50b https://www.encodeproject.org/files/ENCFF687RIS/@@download/ENCFF687RIS.bam hg19 released borderline replicate concordance, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF189FPT bam alignments ENCSR162IEM ChIP-seq EFO:0002067 K562 cell line Homo sapiens MYBL2-human ENCAB572QGE DNA False 2017-08-25 ENCODE 1 100 ENCFF329ODS, ENCFF765DMW, ENCFF807MUK 8462435837 ENCODE Processing Pipeline b14302965f8865da144d3778bfcc2ece https://www.encodeproject.org/files/ENCFF189FPT/@@download/ENCFF189FPT.bam hg19 released borderline replicate concordance, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF846GWP bigWig signal p-value ENCSR162IEM ChIP-seq EFO:0002067 K562 cell line Homo sapiens MYBL2-human ENCAB572QGE DNA False 2017-08-25 ENCODE 1 ENCFF298ZEH, ENCFF712WXB, ENCFF790TAN 1826936022 ENCODE Processing Pipeline 4a8eb1e8098f3d951820905776475118 https://www.encodeproject.org/files/ENCFF846GWP/@@download/ENCFF846GWP.bigWig GRCh38 released borderline replicate concordance, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF675WIG bigWig signal p-value ENCSR162IEM ChIP-seq EFO:0002067 K562 cell line Homo sapiens MYBL2-human ENCAB572QGE DNA False 2017-08-25 ENCODE 2 ENCFF591ADX, ENCFF712WXB 949676206 ENCODE Processing Pipeline 5c4fba6fc91abeab1674045b1c18bf41 https://www.encodeproject.org/files/ENCFF675WIG/@@download/ENCFF675WIG.bigWig GRCh38 released borderline replicate concordance, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF328ERD bigWig signal p-value ENCSR162IEM ChIP-seq EFO:0002067 K562 cell line Homo sapiens MYBL2-human ENCAB572QGE DNA False 2017-08-25 ENCODE 1, 2 ENCFF298ZEH, ENCFF591ADX, ENCFF712WXB, ENCFF790TAN 2417691806 ENCODE Processing Pipeline 75d4414488fcb7777f6f1c989dd384e0 https://www.encodeproject.org/files/ENCFF328ERD/@@download/ENCFF328ERD.bigWig GRCh38 released borderline replicate concordance, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF055RAT bigWig fold change over control ENCSR162IEM ChIP-seq EFO:0002067 K562 cell line Homo sapiens MYBL2-human ENCAB572QGE DNA False 2017-08-25 ENCODE 1 ENCFF298ZEH, ENCFF712WXB, ENCFF790TAN 2509368981 ENCODE Processing Pipeline 9329217e92605acda61dd3503c3c762d https://www.encodeproject.org/files/ENCFF055RAT/@@download/ENCFF055RAT.bigWig GRCh38 released borderline replicate concordance, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF406XUO bed narrowPeak peaks ENCSR162IEM ChIP-seq EFO:0002067 K562 cell line Homo sapiens MYBL2-human ENCAB572QGE DNA False 2017-08-25 ENCODE 2 ENCFF591ADX, ENCFF712WXB 6130759 ENCODE Processing Pipeline fa40ab8d0ef615a3f86b370d9455780b https://www.encodeproject.org/files/ENCFF406XUO/@@download/ENCFF406XUO.bed.gz GRCh38 released borderline replicate concordance, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF037DSE bigBed narrowPeak peaks ENCSR162IEM ChIP-seq EFO:0002067 K562 cell line Homo sapiens MYBL2-human ENCAB572QGE DNA False 2017-08-25 ENCODE 1 ENCFF827OZO 11067991 ENCODE Processing Pipeline 30edb8c596c04db88e81c26648407ad8 https://www.encodeproject.org/files/ENCFF037DSE/@@download/ENCFF037DSE.bigBed GRCh38 released borderline replicate concordance, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF148HSX bigBed narrowPeak peaks ENCSR162IEM ChIP-seq EFO:0002067 K562 cell line Homo sapiens MYBL2-human ENCAB572QGE DNA False 2017-08-25 ENCODE 2 ENCFF406XUO 13363220 ENCODE Processing Pipeline efb52f6d33ce3d539527a300f916a2c8 https://www.encodeproject.org/files/ENCFF148HSX/@@download/ENCFF148HSX.bigBed GRCh38 released borderline replicate concordance, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF889AKD bigBed narrowPeak optimal idr thresholded peaks ENCSR162IEM ChIP-seq EFO:0002067 K562 cell line Homo sapiens MYBL2-human ENCAB572QGE DNA False 2017-08-25 ENCODE 1, 2 ENCFF905KOD 238657 ENCODE Processing Pipeline 679d10a9c8d81622a11ce9942804c8ef https://www.encodeproject.org/files/ENCFF889AKD/@@download/ENCFF889AKD.bigBed GRCh38 released borderline replicate concordance, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF020PDU bigWig fold change over control ENCSR162IEM ChIP-seq EFO:0002067 K562 cell line Homo sapiens MYBL2-human ENCAB572QGE DNA False 2017-08-25 ENCODE 2 ENCFF591ADX, ENCFF712WXB 908727141 ENCODE Processing Pipeline 2a91d0c5de104e82225791af637721b3 https://www.encodeproject.org/files/ENCFF020PDU/@@download/ENCFF020PDU.bigWig GRCh38 released borderline replicate concordance, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF540WYT bigBed narrowPeak peaks ENCSR162IEM ChIP-seq EFO:0002067 K562 cell line Homo sapiens MYBL2-human ENCAB572QGE DNA False 2017-08-25 ENCODE 1, 2 ENCFF434VVG 13134136 ENCODE Processing Pipeline f2845744a60ddcc5e56c03908753cf08 https://www.encodeproject.org/files/ENCFF540WYT/@@download/ENCFF540WYT.bigBed GRCh38 released borderline replicate concordance, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF415HOL bigWig fold change over control ENCSR162IEM ChIP-seq EFO:0002067 K562 cell line Homo sapiens MYBL2-human ENCAB572QGE DNA False 2017-08-25 ENCODE 1, 2 ENCFF298ZEH, ENCFF591ADX, ENCFF712WXB, ENCFF790TAN 2696733567 ENCODE Processing Pipeline 1087405c169414b90eb3db8d3eb5e1fc https://www.encodeproject.org/files/ENCFF415HOL/@@download/ENCFF415HOL.bigWig GRCh38 released borderline replicate concordance, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF827OZO bed narrowPeak peaks ENCSR162IEM ChIP-seq EFO:0002067 K562 cell line Homo sapiens MYBL2-human ENCAB572QGE DNA False 2017-08-25 ENCODE 1 ENCFF298ZEH, ENCFF712WXB, ENCFF790TAN 7244895 ENCODE Processing Pipeline 6c3bd78fdd3e0e8681d0c61c8c57d012 https://www.encodeproject.org/files/ENCFF827OZO/@@download/ENCFF827OZO.bed.gz GRCh38 released borderline replicate concordance, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF434VVG bed narrowPeak peaks ENCSR162IEM ChIP-seq EFO:0002067 K562 cell line Homo sapiens MYBL2-human ENCAB572QGE DNA False 2017-08-25 ENCODE 1, 2 ENCFF298ZEH, ENCFF591ADX, ENCFF712WXB, ENCFF790TAN 7280023 ENCODE Processing Pipeline 8afe3aec62dd66b229a91808604b4636 https://www.encodeproject.org/files/ENCFF434VVG/@@download/ENCFF434VVG.bed.gz GRCh38 released borderline replicate concordance, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF061UNO bed narrowPeak conservative idr thresholded peaks ENCSR162IEM ChIP-seq EFO:0002067 K562 cell line Homo sapiens MYBL2-human ENCAB572QGE DNA False 2017-08-25 ENCODE 1, 2 ENCFF406XUO, ENCFF419RSJ, ENCFF434VVG, ENCFF827OZO 66552 ENCODE Processing Pipeline a52ddf6a7aba9a94576c3118f814b856 https://www.encodeproject.org/files/ENCFF061UNO/@@download/ENCFF061UNO.bed.gz GRCh38 released borderline replicate concordance, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF839BUQ bigBed narrowPeak conservative idr thresholded peaks ENCSR162IEM ChIP-seq EFO:0002067 K562 cell line Homo sapiens MYBL2-human ENCAB572QGE DNA False 2017-08-25 ENCODE 1, 2 ENCFF061UNO 167325 ENCODE Processing Pipeline 055ca7d793177abdeaa75dbc5db68d67 https://www.encodeproject.org/files/ENCFF839BUQ/@@download/ENCFF839BUQ.bigBed GRCh38 released borderline replicate concordance, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF905KOD bed narrowPeak optimal idr thresholded peaks ENCSR162IEM ChIP-seq EFO:0002067 K562 cell line Homo sapiens MYBL2-human ENCAB572QGE DNA False 2017-08-25 ENCODE 1, 2 ENCFF406XUO, ENCFF419RSJ, ENCFF434VVG, ENCFF827OZO 89862 ENCODE Processing Pipeline 56cd919bdab94ad8d0462c3fb5db363a https://www.encodeproject.org/files/ENCFF905KOD/@@download/ENCFF905KOD.bed.gz GRCh38 released borderline replicate concordance, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF626TXC bigWig signal p-value ENCSR162IEM ChIP-seq EFO:0002067 K562 cell line Homo sapiens MYBL2-human ENCAB572QGE DNA False 2017-08-25 ENCODE 1 ENCFF160VXC, ENCFF189FPT, ENCFF834TUP 2168812546 ENCODE Processing Pipeline 7e60ba00cb5580186526978bf6b9eb96 https://www.encodeproject.org/files/ENCFF626TXC/@@download/ENCFF626TXC.bigWig hg19 released borderline replicate concordance, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF484VIE bigWig signal p-value ENCSR162IEM ChIP-seq EFO:0002067 K562 cell line Homo sapiens MYBL2-human ENCAB572QGE DNA False 2017-08-25 ENCODE 2 ENCFF700FUA, ENCFF834TUP 932807292 ENCODE Processing Pipeline a8cf532afb10cabfa997006768081542 https://www.encodeproject.org/files/ENCFF484VIE/@@download/ENCFF484VIE.bigWig hg19 released borderline replicate concordance, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF459FNH bigWig signal p-value ENCSR162IEM ChIP-seq EFO:0002067 K562 cell line Homo sapiens MYBL2-human ENCAB572QGE DNA False 2017-08-25 ENCODE 1, 2 ENCFF160VXC, ENCFF189FPT, ENCFF700FUA, ENCFF834TUP 2431088985 ENCODE Processing Pipeline a925528650d35ed3fedf93538fbc2897 https://www.encodeproject.org/files/ENCFF459FNH/@@download/ENCFF459FNH.bigWig hg19 released borderline replicate concordance, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF177NRM bigWig fold change over control ENCSR162IEM ChIP-seq EFO:0002067 K562 cell line Homo sapiens MYBL2-human ENCAB572QGE DNA False 2017-08-25 ENCODE 1 ENCFF160VXC, ENCFF189FPT, ENCFF834TUP 2498790079 ENCODE Processing Pipeline 0c4024ecc13123f13a7f63392b4e53b4 https://www.encodeproject.org/files/ENCFF177NRM/@@download/ENCFF177NRM.bigWig hg19 released borderline replicate concordance, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF031LSE bigWig fold change over control ENCSR162IEM ChIP-seq EFO:0002067 K562 cell line Homo sapiens MYBL2-human ENCAB572QGE DNA False 2017-08-25 ENCODE 2 ENCFF700FUA, ENCFF834TUP 901748097 ENCODE Processing Pipeline 368a6b15119272e73aa15e3cc412225b https://www.encodeproject.org/files/ENCFF031LSE/@@download/ENCFF031LSE.bigWig hg19 released borderline replicate concordance, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF487KQK bigWig fold change over control ENCSR162IEM ChIP-seq EFO:0002067 K562 cell line Homo sapiens MYBL2-human ENCAB572QGE DNA False 2017-08-25 ENCODE 1, 2 ENCFF160VXC, ENCFF189FPT, ENCFF700FUA, ENCFF834TUP 2719919632 ENCODE Processing Pipeline 8f08ae97305e5f85e39c208ddd35f77d https://www.encodeproject.org/files/ENCFF487KQK/@@download/ENCFF487KQK.bigWig hg19 released borderline replicate concordance, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF486FET bed narrowPeak peaks ENCSR162IEM ChIP-seq EFO:0002067 K562 cell line Homo sapiens MYBL2-human ENCAB572QGE DNA False 2017-08-25 ENCODE 1 ENCFF160VXC, ENCFF189FPT, ENCFF834TUP 7239229 ENCODE Processing Pipeline ec683eed7ca6abdecb559cba9830d724 https://www.encodeproject.org/files/ENCFF486FET/@@download/ENCFF486FET.bed.gz hg19 released borderline replicate concordance, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF534CIF bed narrowPeak peaks ENCSR162IEM ChIP-seq EFO:0002067 K562 cell line Homo sapiens MYBL2-human ENCAB572QGE DNA False 2017-08-25 ENCODE 2 ENCFF700FUA, ENCFF834TUP 6123736 ENCODE Processing Pipeline 1912dede8fd2149f0c07623f8daa48e5 https://www.encodeproject.org/files/ENCFF534CIF/@@download/ENCFF534CIF.bed.gz hg19 released borderline replicate concordance, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF677IKS bed narrowPeak peaks ENCSR162IEM ChIP-seq EFO:0002067 K562 cell line Homo sapiens MYBL2-human ENCAB572QGE DNA False 2017-08-25 ENCODE 1, 2 ENCFF160VXC, ENCFF189FPT, ENCFF700FUA, ENCFF834TUP 7273760 ENCODE Processing Pipeline 156b7b7a0ae57f855b38516596524aca https://www.encodeproject.org/files/ENCFF677IKS/@@download/ENCFF677IKS.bed.gz hg19 released borderline replicate concordance, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF546DAH bigBed narrowPeak peaks ENCSR162IEM ChIP-seq EFO:0002067 K562 cell line Homo sapiens MYBL2-human ENCAB572QGE DNA False 2017-08-25 ENCODE 1 ENCFF486FET 11054016 ENCODE Processing Pipeline e0e5915b55800c5a08ba384eb2e71b7f https://www.encodeproject.org/files/ENCFF546DAH/@@download/ENCFF546DAH.bigBed hg19 released borderline replicate concordance, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF344NIU bigBed narrowPeak peaks ENCSR162IEM ChIP-seq EFO:0002067 K562 cell line Homo sapiens MYBL2-human ENCAB572QGE DNA False 2017-08-25 ENCODE 2 ENCFF534CIF 13346093 ENCODE Processing Pipeline e5b89152c9f3fa8a331f1ef6c7bebc4a https://www.encodeproject.org/files/ENCFF344NIU/@@download/ENCFF344NIU.bigBed hg19 released borderline replicate concordance, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF312WOE bigBed narrowPeak peaks ENCSR162IEM ChIP-seq EFO:0002067 K562 cell line Homo sapiens MYBL2-human ENCAB572QGE DNA False 2017-08-25 ENCODE 1, 2 ENCFF677IKS 13129783 ENCODE Processing Pipeline 2444083a7c42b48b42ac03db34378985 https://www.encodeproject.org/files/ENCFF312WOE/@@download/ENCFF312WOE.bigBed hg19 released borderline replicate concordance, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF865IDL bed narrowPeak conservative idr thresholded peaks ENCSR162IEM ChIP-seq EFO:0002067 K562 cell line Homo sapiens MYBL2-human ENCAB572QGE DNA False 2017-08-25 ENCODE 1, 2 ENCFF001TDO, ENCFF486FET, ENCFF534CIF, ENCFF677IKS 64906 ENCODE Processing Pipeline 84c7261dcc551ee304a34112f3f91d2e https://www.encodeproject.org/files/ENCFF865IDL/@@download/ENCFF865IDL.bed.gz hg19 released borderline replicate concordance, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF633DAY bigBed narrowPeak conservative idr thresholded peaks ENCSR162IEM ChIP-seq EFO:0002067 K562 cell line Homo sapiens MYBL2-human ENCAB572QGE DNA False 2017-08-25 ENCODE 1, 2 ENCFF865IDL 163160 ENCODE Processing Pipeline 2fe5b7b936d87d0e6d0b2bd848e8cc44 https://www.encodeproject.org/files/ENCFF633DAY/@@download/ENCFF633DAY.bigBed hg19 released borderline replicate concordance, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF877ANE bed narrowPeak optimal idr thresholded peaks ENCSR162IEM ChIP-seq EFO:0002067 K562 cell line Homo sapiens MYBL2-human ENCAB572QGE DNA False 2017-08-25 ENCODE 1, 2 ENCFF001TDO, ENCFF486FET, ENCFF534CIF, ENCFF677IKS 87379 ENCODE Processing Pipeline 5b3373ba623689cbcabf76d230465984 https://www.encodeproject.org/files/ENCFF877ANE/@@download/ENCFF877ANE.bed.gz hg19 released borderline replicate concordance, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF745ARK bigBed narrowPeak optimal idr thresholded peaks ENCSR162IEM ChIP-seq EFO:0002067 K562 cell line Homo sapiens MYBL2-human ENCAB572QGE DNA False 2017-08-25 ENCODE 1, 2 ENCFF877ANE 232193 ENCODE Processing Pipeline 56d8e3db877287d6b7781bef0a0f740b https://www.encodeproject.org/files/ENCFF745ARK/@@download/ENCFF745ARK.bigBed hg19 released borderline replicate concordance, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity ENCFF942ZRE fastq reads ENCSR024LKA ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC3-human ENCAB179VMG DNA False 2018-01-26 ENCODE 3 1 100 paired-ended 1 ENCFF908SKY 4443988675 Michael Snyder, Stanford 7e2d551f2095c8eee31203c3dd02cd9b https://www.encodeproject.org/files/ENCFF942ZRE/@@download/ENCFF942ZRE.fastq.gz Illumina HiSeq 4000 /files/ENCFF498JMO/ released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF908SKY fastq reads ENCSR024LKA ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC3-human ENCAB179VMG DNA False 2018-01-26 ENCODE 3 1 100 paired-ended 2 ENCFF942ZRE 4955245370 Michael Snyder, Stanford c324414dc19f388da6424b5841ea9031 https://www.encodeproject.org/files/ENCFF908SKY/@@download/ENCFF908SKY.fastq.gz Illumina HiSeq 4000 /files/ENCFF502GTS/ released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF770NDG fastq reads ENCSR024LKA ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC3-human ENCAB179VMG DNA False 2018-01-26 ENCODE 4 1 100 paired-ended 1 ENCFF369MSV 4181264057 Michael Snyder, Stanford f43c35df651fa500da223cc7d11157f5 https://www.encodeproject.org/files/ENCFF770NDG/@@download/ENCFF770NDG.fastq.gz Illumina HiSeq 4000 /files/ENCFF259GQA/ released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF369MSV fastq reads ENCSR024LKA ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC3-human ENCAB179VMG DNA False 2018-01-26 ENCODE 4 1 100 paired-ended 2 ENCFF770NDG 4504943813 Michael Snyder, Stanford d09964673a604e42fa92751c151174b0 https://www.encodeproject.org/files/ENCFF369MSV/@@download/ENCFF369MSV.fastq.gz Illumina HiSeq 4000 /files/ENCFF837MIV/ released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF587CZT bam unfiltered alignments ENCSR024LKA ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC3-human ENCAB179VMG DNA False 2018-01-26 ENCODE 3 100 ENCFF807MUK, ENCFF908SKY, ENCFF942ZRE 7847864345 ENCODE Processing Pipeline c4e12579d0c93b01b3c5d89e0dbcb5a4 https://www.encodeproject.org/files/ENCFF587CZT/@@download/ENCFF587CZT.bam hg19 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF370NZS bam unfiltered alignments ENCSR024LKA ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC3-human ENCAB179VMG DNA False 2018-01-26 ENCODE 4 100 ENCFF369MSV, ENCFF770NDG, ENCFF807MUK 8032102357 ENCODE Processing Pipeline 3749067914580edad31c72d3b9b0c3b6 https://www.encodeproject.org/files/ENCFF370NZS/@@download/ENCFF370NZS.bam hg19 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF806JOR bam unfiltered alignments ENCSR024LKA ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC3-human ENCAB179VMG DNA False 2018-01-26 ENCODE 3 100 ENCFF643CGH, ENCFF908SKY, ENCFF942ZRE 7845188840 ENCODE Processing Pipeline 373aa391d531f0da18fe5964ee379bc3 https://www.encodeproject.org/files/ENCFF806JOR/@@download/ENCFF806JOR.bam GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF795LNM bam unfiltered alignments ENCSR024LKA ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC3-human ENCAB179VMG DNA False 2018-01-26 ENCODE 4 100 ENCFF369MSV, ENCFF643CGH, ENCFF770NDG 8039757861 ENCODE Processing Pipeline dabfcb34d2390e0eb693d8dee11c360a https://www.encodeproject.org/files/ENCFF795LNM/@@download/ENCFF795LNM.bam GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF127OLY bam alignments ENCSR024LKA ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC3-human ENCAB179VMG DNA False 2018-01-26 ENCODE 3 100 ENCFF807MUK, ENCFF908SKY, ENCFF942ZRE 4135383689 ENCODE Processing Pipeline 620850699dec1a60cea6040ddb7ae763 https://www.encodeproject.org/files/ENCFF127OLY/@@download/ENCFF127OLY.bam hg19 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF040NCF bam alignments ENCSR024LKA ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC3-human ENCAB179VMG DNA False 2018-01-26 ENCODE 3 100 ENCFF643CGH, ENCFF908SKY, ENCFF942ZRE 4138210429 ENCODE Processing Pipeline 143be789d3393db550005938676ec12d https://www.encodeproject.org/files/ENCFF040NCF/@@download/ENCFF040NCF.bam GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF172XFW bam alignments ENCSR024LKA ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC3-human ENCAB179VMG DNA False 2018-01-26 ENCODE 4 100 ENCFF369MSV, ENCFF643CGH, ENCFF770NDG 5607680139 ENCODE Processing Pipeline ca199e29f0396e93d077415311a7e83f https://www.encodeproject.org/files/ENCFF172XFW/@@download/ENCFF172XFW.bam GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF345VAR bam alignments ENCSR024LKA ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC3-human ENCAB179VMG DNA False 2018-01-26 ENCODE 4 100 ENCFF369MSV, ENCFF770NDG, ENCFF807MUK 5602611724 ENCODE Processing Pipeline 77a3e686caf30b5c1e0fa2706c1807bf https://www.encodeproject.org/files/ENCFF345VAR/@@download/ENCFF345VAR.bam hg19 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF775STF bigWig signal p-value ENCSR024LKA ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC3-human ENCAB179VMG DNA False 2018-01-26 ENCODE 3 ENCFF127OLY, ENCFF160VXC 1214568140 ENCODE Processing Pipeline 5dad989afc756fe28676be4b1d6c39c8 https://www.encodeproject.org/files/ENCFF775STF/@@download/ENCFF775STF.bigWig hg19 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF273PLE bigWig signal p-value ENCSR024LKA ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC3-human ENCAB179VMG DNA False 2018-01-26 ENCODE 4 ENCFF160VXC, ENCFF345VAR, ENCFF834TUP 1794147073 ENCODE Processing Pipeline 16f6b3cd1cee0f10e73e798b2244f1b2 https://www.encodeproject.org/files/ENCFF273PLE/@@download/ENCFF273PLE.bigWig hg19 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF063VGP bigWig signal p-value ENCSR024LKA ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC3-human ENCAB179VMG DNA False 2018-01-26 ENCODE 3, 4 ENCFF127OLY, ENCFF160VXC, ENCFF345VAR, ENCFF834TUP 2445175994 ENCODE Processing Pipeline 9190a6fbdd169cc6327be7fb67c6e436 https://www.encodeproject.org/files/ENCFF063VGP/@@download/ENCFF063VGP.bigWig hg19 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF864OJK bigWig fold change over control ENCSR024LKA ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC3-human ENCAB179VMG DNA False 2018-01-26 ENCODE 3 ENCFF127OLY, ENCFF160VXC 1427431090 ENCODE Processing Pipeline 2eac646bea37541461c795b56f438c4c https://www.encodeproject.org/files/ENCFF864OJK/@@download/ENCFF864OJK.bigWig hg19 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF020DCN bigWig fold change over control ENCSR024LKA ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC3-human ENCAB179VMG DNA False 2018-01-26 ENCODE 4 ENCFF160VXC, ENCFF345VAR, ENCFF834TUP 2101514701 ENCODE Processing Pipeline a8417ea38f2dadd9deec92ed305200e5 https://www.encodeproject.org/files/ENCFF020DCN/@@download/ENCFF020DCN.bigWig hg19 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF137LOO bigWig fold change over control ENCSR024LKA ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC3-human ENCAB179VMG DNA False 2018-01-26 ENCODE 3, 4 ENCFF127OLY, ENCFF160VXC, ENCFF345VAR, ENCFF834TUP 2558779371 ENCODE Processing Pipeline f938510440a7f09569f115de638ba8b8 https://www.encodeproject.org/files/ENCFF137LOO/@@download/ENCFF137LOO.bigWig hg19 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF883NAR bed narrowPeak peaks ENCSR024LKA ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC3-human ENCAB179VMG DNA False 2018-01-26 ENCODE 3 ENCFF127OLY, ENCFF160VXC 7021507 ENCODE Processing Pipeline fe45ff543ef8295a5913e3a681bfce77 https://www.encodeproject.org/files/ENCFF883NAR/@@download/ENCFF883NAR.bed.gz hg19 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF275SGC bed narrowPeak peaks ENCSR024LKA ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC3-human ENCAB179VMG DNA False 2018-01-26 ENCODE 4 ENCFF160VXC, ENCFF345VAR, ENCFF834TUP 7080034 ENCODE Processing Pipeline 4acb7dce7f05f3a92faf0b49cf25c25c https://www.encodeproject.org/files/ENCFF275SGC/@@download/ENCFF275SGC.bed.gz hg19 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF932HNN bed narrowPeak peaks ENCSR024LKA ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC3-human ENCAB179VMG DNA False 2018-01-26 ENCODE 3, 4 ENCFF127OLY, ENCFF160VXC, ENCFF345VAR, ENCFF834TUP 7256189 ENCODE Processing Pipeline 07c568604e67de0671d91cef01b6929b https://www.encodeproject.org/files/ENCFF932HNN/@@download/ENCFF932HNN.bed.gz hg19 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF080EKE bigBed narrowPeak peaks ENCSR024LKA ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC3-human ENCAB179VMG DNA False 2018-01-26 ENCODE 3 ENCFF883NAR 13033276 ENCODE Processing Pipeline 9223f63ec61024656d49a44a50e53221 https://www.encodeproject.org/files/ENCFF080EKE/@@download/ENCFF080EKE.bigBed hg19 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF385NGV bigBed narrowPeak peaks ENCSR024LKA ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC3-human ENCAB179VMG DNA False 2018-01-26 ENCODE 4 ENCFF275SGC 10877067 ENCODE Processing Pipeline 3682be03feccfd82066536d0157efeef https://www.encodeproject.org/files/ENCFF385NGV/@@download/ENCFF385NGV.bigBed hg19 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF135RRA bigBed narrowPeak peaks ENCSR024LKA ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC3-human ENCAB179VMG DNA False 2018-01-26 ENCODE 3, 4 ENCFF932HNN 12982366 ENCODE Processing Pipeline 130ce48fda3c4199c8e0335ddd0c1d2a https://www.encodeproject.org/files/ENCFF135RRA/@@download/ENCFF135RRA.bigBed hg19 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF765UDL bed narrowPeak conservative idr thresholded peaks ENCSR024LKA ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC3-human ENCAB179VMG DNA False 2018-01-26 ENCODE 3, 4 ENCFF001TDO, ENCFF275SGC, ENCFF883NAR, ENCFF932HNN 119498 ENCODE Processing Pipeline 6f18ee66326f6e50179cdb72337839af https://www.encodeproject.org/files/ENCFF765UDL/@@download/ENCFF765UDL.bed.gz hg19 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF685PMX bigBed narrowPeak conservative idr thresholded peaks ENCSR024LKA ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC3-human ENCAB179VMG DNA False 2018-01-26 ENCODE 3, 4 ENCFF765UDL 276425 ENCODE Processing Pipeline 564262954855d54ad3f766c9da5c53b5 https://www.encodeproject.org/files/ENCFF685PMX/@@download/ENCFF685PMX.bigBed hg19 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF580DYE bed narrowPeak optimal idr thresholded peaks ENCSR024LKA ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC3-human ENCAB179VMG DNA False 2018-01-26 ENCODE 3, 4 ENCFF001TDO, ENCFF275SGC, ENCFF883NAR, ENCFF932HNN 203383 ENCODE Processing Pipeline 7d4031c85c21101f3842c25c04a662c7 https://www.encodeproject.org/files/ENCFF580DYE/@@download/ENCFF580DYE.bed.gz hg19 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF933UFQ bigBed narrowPeak optimal idr thresholded peaks ENCSR024LKA ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC3-human ENCAB179VMG DNA False 2018-01-26 ENCODE 3, 4 ENCFF580DYE 474667 ENCODE Processing Pipeline 9b520d82acaa292dca7b2888d8f3fdb0 https://www.encodeproject.org/files/ENCFF933UFQ/@@download/ENCFF933UFQ.bigBed hg19 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF103KGE bigWig signal p-value ENCSR024LKA ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC3-human ENCAB179VMG DNA False 2018-01-26 ENCODE 3 ENCFF040NCF, ENCFF790TAN 1303233729 ENCODE Processing Pipeline ed7d85cce9be02ea6af0797652f152d7 https://www.encodeproject.org/files/ENCFF103KGE/@@download/ENCFF103KGE.bigWig GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF650JID bigWig signal p-value ENCSR024LKA ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC3-human ENCAB179VMG DNA False 2018-01-26 ENCODE 4 ENCFF172XFW, ENCFF712WXB, ENCFF790TAN 2005705160 ENCODE Processing Pipeline 9276358fc35c68da69e082e8fd268efa https://www.encodeproject.org/files/ENCFF650JID/@@download/ENCFF650JID.bigWig GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF458TVS bigWig signal p-value ENCSR024LKA ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC3-human ENCAB179VMG DNA False 2018-01-26 ENCODE 3, 4 ENCFF040NCF, ENCFF172XFW, ENCFF712WXB, ENCFF790TAN 2454714847 ENCODE Processing Pipeline 210ba0fa3a81d8f95ccd37ba7dddd42e https://www.encodeproject.org/files/ENCFF458TVS/@@download/ENCFF458TVS.bigWig GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF694CYO bigWig fold change over control ENCSR024LKA ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC3-human ENCAB179VMG DNA False 2018-01-26 ENCODE 3 ENCFF040NCF, ENCFF790TAN 1429721076 ENCODE Processing Pipeline 548c9604e09b1ace9b8bdad008cffdc3 https://www.encodeproject.org/files/ENCFF694CYO/@@download/ENCFF694CYO.bigWig GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF534UCW bigWig fold change over control ENCSR024LKA ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC3-human ENCAB179VMG DNA False 2018-01-26 ENCODE 4 ENCFF172XFW, ENCFF712WXB, ENCFF790TAN 2101932892 ENCODE Processing Pipeline c286541932895151986940270c43d1aa https://www.encodeproject.org/files/ENCFF534UCW/@@download/ENCFF534UCW.bigWig GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF656AYV bigWig fold change over control ENCSR024LKA ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC3-human ENCAB179VMG DNA False 2018-01-26 ENCODE 3, 4 ENCFF040NCF, ENCFF172XFW, ENCFF712WXB, ENCFF790TAN 2571840745 ENCODE Processing Pipeline 410ef7bc165408435e4c18ae9277ad4e https://www.encodeproject.org/files/ENCFF656AYV/@@download/ENCFF656AYV.bigWig GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF407QEE bed narrowPeak peaks ENCSR024LKA ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC3-human ENCAB179VMG DNA False 2018-01-26 ENCODE 4 ENCFF172XFW, ENCFF712WXB, ENCFF790TAN 7034259 ENCODE Processing Pipeline 3ef84d4a9920882d83e975d075e4b87e https://www.encodeproject.org/files/ENCFF407QEE/@@download/ENCFF407QEE.bed.gz GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF014UJZ bigBed narrowPeak peaks ENCSR024LKA ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC3-human ENCAB179VMG DNA False 2018-01-26 ENCODE 4 ENCFF407QEE 10886847 ENCODE Processing Pipeline 0a4ad519b71fe93b3c8c4ede39a4f203 https://www.encodeproject.org/files/ENCFF014UJZ/@@download/ENCFF014UJZ.bigBed GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF608YGZ bed narrowPeak conservative idr thresholded peaks ENCSR024LKA ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC3-human ENCAB179VMG DNA False 2018-01-26 ENCODE 3, 4 ENCFF230MVV, ENCFF407QEE, ENCFF419RSJ, ENCFF789HLZ 120536 ENCODE Processing Pipeline 5f7a69d6013e9d737f68d87326d59b68 https://www.encodeproject.org/files/ENCFF608YGZ/@@download/ENCFF608YGZ.bed.gz GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF913RTD bigBed narrowPeak peaks ENCSR024LKA ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC3-human ENCAB179VMG DNA False 2018-01-26 ENCODE 3 ENCFF230MVV 13046676 ENCODE Processing Pipeline fa31e14153a8c9718dfd65ba6353db9f https://www.encodeproject.org/files/ENCFF913RTD/@@download/ENCFF913RTD.bigBed GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF230MVV bed narrowPeak peaks ENCSR024LKA ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC3-human ENCAB179VMG DNA False 2018-01-26 ENCODE 3 ENCFF040NCF, ENCFF790TAN 6963863 ENCODE Processing Pipeline 383cb764aab51a75b5ad0d2686b054e6 https://www.encodeproject.org/files/ENCFF230MVV/@@download/ENCFF230MVV.bed.gz GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF789HLZ bed narrowPeak peaks ENCSR024LKA ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC3-human ENCAB179VMG DNA False 2018-01-26 ENCODE 3, 4 ENCFF040NCF, ENCFF172XFW, ENCFF712WXB, ENCFF790TAN 7256427 ENCODE Processing Pipeline 893d18e2a36b50aaf98443a14d1f8a3c https://www.encodeproject.org/files/ENCFF789HLZ/@@download/ENCFF789HLZ.bed.gz GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF674TMB bigBed narrowPeak conservative idr thresholded peaks ENCSR024LKA ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC3-human ENCAB179VMG DNA False 2018-01-26 ENCODE 3, 4 ENCFF608YGZ 279272 ENCODE Processing Pipeline 1b159540aefb1a92cc85dcafe166b950 https://www.encodeproject.org/files/ENCFF674TMB/@@download/ENCFF674TMB.bigBed GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF742LSD bed narrowPeak optimal idr thresholded peaks ENCSR024LKA ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC3-human ENCAB179VMG DNA False 2018-01-26 ENCODE 3, 4 ENCFF230MVV, ENCFF407QEE, ENCFF419RSJ, ENCFF789HLZ 203453 ENCODE Processing Pipeline a652dacc98f08a6d68539358b6889050 https://www.encodeproject.org/files/ENCFF742LSD/@@download/ENCFF742LSD.bed.gz GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF280PVF bigBed narrowPeak optimal idr thresholded peaks ENCSR024LKA ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC3-human ENCAB179VMG DNA False 2018-01-26 ENCODE 3, 4 ENCFF742LSD 475896 ENCODE Processing Pipeline 99dd039035c8bac824babf6cf53ffc24 https://www.encodeproject.org/files/ENCFF280PVF/@@download/ENCFF280PVF.bigBed GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF749CSK bigBed narrowPeak peaks ENCSR024LKA ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC3-human ENCAB179VMG DNA False 2018-01-26 ENCODE 3, 4 ENCFF789HLZ 12996085 ENCODE Processing Pipeline f07b3a8632c0796f64db0991f6daed48 https://www.encodeproject.org/files/ENCFF749CSK/@@download/ENCFF749CSK.bigBed GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity experiment not submitted to GEO partially characterized antibody ENCFF956KKU fastq reads ENCSR168CEE ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA6-human ENCAB686QMA DNA False 2017-07-28 ENCODE 1 1 100 paired-ended 1 ENCFF957QWK 3381348310 Michael Snyder, Stanford 6d04a9ca776ac908a504ebc83de2692b SRA:SRR6212880 https://www.encodeproject.org/files/ENCFF956KKU/@@download/ENCFF956KKU.fastq.gz Illumina HiSeq 4000 /files/ENCFF498JMO/ released mild to moderate bottlenecking ENCFF666XKI fastq reads ENCSR168CEE ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA6-human ENCAB686QMA DNA False 2017-07-28 ENCODE 2 1 100 paired-ended 1 ENCFF059NSA 3095998628 Michael Snyder, Stanford 779d91207d9ab0d6fcdeef555063b2b9 SRA:SRR6212881 https://www.encodeproject.org/files/ENCFF666XKI/@@download/ENCFF666XKI.fastq.gz Illumina HiSeq 4000 /files/ENCFF259GQA/ released mild to moderate bottlenecking ENCFF059NSA fastq reads ENCSR168CEE ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA6-human ENCAB686QMA DNA False 2017-07-28 ENCODE 2 1 100 paired-ended 2 ENCFF666XKI 3409233594 Michael Snyder, Stanford 69474b24328120f4bbc8676784841897 SRA:SRR6212881 https://www.encodeproject.org/files/ENCFF059NSA/@@download/ENCFF059NSA.fastq.gz Illumina HiSeq 4000 /files/ENCFF837MIV/ released mild to moderate bottlenecking ENCFF957QWK fastq reads ENCSR168CEE ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA6-human ENCAB686QMA DNA False 2017-07-28 ENCODE 1 1 100 paired-ended 2 ENCFF956KKU 3744099128 Michael Snyder, Stanford 548f98e6a4cbeaaf870a013f39c09ed5 SRA:SRR6212880 https://www.encodeproject.org/files/ENCFF957QWK/@@download/ENCFF957QWK.fastq.gz Illumina HiSeq 4000 /files/ENCFF502GTS/ released mild to moderate bottlenecking ENCFF847DHJ bam unfiltered alignments ENCSR168CEE ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA6-human ENCAB686QMA DNA False 2017-07-28 ENCODE 2 100 ENCFF059NSA, ENCFF643CGH, ENCFF666XKI 6334642429 ENCODE Processing Pipeline 63c73b9a5516b22147fc17793b7f3a3d https://www.encodeproject.org/files/ENCFF847DHJ/@@download/ENCFF847DHJ.bam GRCh38 released mild to moderate bottlenecking ENCFF472SSN bam unfiltered alignments ENCSR168CEE ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA6-human ENCAB686QMA DNA False 2017-07-28 ENCODE 2 100 ENCFF059NSA, ENCFF666XKI, ENCFF807MUK 6328297515 ENCODE Processing Pipeline 112b33872526af65af91e553e620e2b5 https://www.encodeproject.org/files/ENCFF472SSN/@@download/ENCFF472SSN.bam hg19 released mild to moderate bottlenecking ENCFF036PMT bam unfiltered alignments ENCSR168CEE ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA6-human ENCAB686QMA DNA False 2017-07-28 ENCODE 1 100 ENCFF643CGH, ENCFF956KKU, ENCFF957QWK 6973184476 ENCODE Processing Pipeline 6fd4ad0c8d0ae54ecb34f13652c74806 https://www.encodeproject.org/files/ENCFF036PMT/@@download/ENCFF036PMT.bam GRCh38 released mild to moderate bottlenecking ENCFF502UWZ bam unfiltered alignments ENCSR168CEE ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA6-human ENCAB686QMA DNA False 2017-07-28 ENCODE 1 100 ENCFF807MUK, ENCFF956KKU, ENCFF957QWK 6965649753 ENCODE Processing Pipeline 7b5aedfddc5867b58d71cd8a52846a94 https://www.encodeproject.org/files/ENCFF502UWZ/@@download/ENCFF502UWZ.bam hg19 released mild to moderate bottlenecking ENCFF362KOB bam alignments ENCSR168CEE ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA6-human ENCAB686QMA DNA False 2017-07-28 ENCODE 2 100 ENCFF059NSA, ENCFF643CGH, ENCFF666XKI 4162752331 ENCODE Processing Pipeline 8ea45a8f6a779b54da74a57dcb111926 https://www.encodeproject.org/files/ENCFF362KOB/@@download/ENCFF362KOB.bam GRCh38 released mild to moderate bottlenecking ENCFF982XUS bam alignments ENCSR168CEE ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA6-human ENCAB686QMA DNA False 2017-07-28 ENCODE 2 100 ENCFF059NSA, ENCFF666XKI, ENCFF807MUK 4159609572 ENCODE Processing Pipeline 47288cd72f354ac042e758367019969d https://www.encodeproject.org/files/ENCFF982XUS/@@download/ENCFF982XUS.bam hg19 released mild to moderate bottlenecking ENCFF910GRL bam alignments ENCSR168CEE ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA6-human ENCAB686QMA DNA False 2017-07-28 ENCODE 1 100 ENCFF643CGH, ENCFF956KKU, ENCFF957QWK 4605788067 ENCODE Processing Pipeline e4c65defc001ac49d6fab1523dc36096 https://www.encodeproject.org/files/ENCFF910GRL/@@download/ENCFF910GRL.bam GRCh38 released mild to moderate bottlenecking ENCFF557UXG bam alignments ENCSR168CEE ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA6-human ENCAB686QMA DNA False 2017-07-28 ENCODE 1 100 ENCFF807MUK, ENCFF956KKU, ENCFF957QWK 4602554646 ENCODE Processing Pipeline ef777f1b86be9283605433899b75c7c1 https://www.encodeproject.org/files/ENCFF557UXG/@@download/ENCFF557UXG.bam hg19 released mild to moderate bottlenecking ENCFF593HVY bigWig signal p-value ENCSR168CEE ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA6-human ENCAB686QMA DNA False 2017-07-28 ENCODE 1 ENCFF160VXC, ENCFF557UXG 1124705897 ENCODE Processing Pipeline 35ac911e47254f2caa2af439af5244d9 https://www.encodeproject.org/files/ENCFF593HVY/@@download/ENCFF593HVY.bigWig hg19 released mild to moderate bottlenecking ENCFF705SXY bigWig signal p-value ENCSR168CEE ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA6-human ENCAB686QMA DNA False 2017-07-28 ENCODE 2 ENCFF834TUP, ENCFF982XUS 1340424940 ENCODE Processing Pipeline cde0415d731203429eb9ce389fba2f3e https://www.encodeproject.org/files/ENCFF705SXY/@@download/ENCFF705SXY.bigWig hg19 released mild to moderate bottlenecking ENCFF454WMN bigWig signal p-value ENCSR168CEE ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA6-human ENCAB686QMA DNA False 2017-07-28 ENCODE 1, 2 ENCFF160VXC, ENCFF557UXG, ENCFF834TUP, ENCFF982XUS 1863080654 ENCODE Processing Pipeline 66a29f27bb5384cad2aba9626cfcfb7e https://www.encodeproject.org/files/ENCFF454WMN/@@download/ENCFF454WMN.bigWig hg19 released mild to moderate bottlenecking ENCFF308IRW bigWig fold change over control ENCSR168CEE ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA6-human ENCAB686QMA DNA False 2017-07-28 ENCODE 1 ENCFF160VXC, ENCFF557UXG 1393285346 ENCODE Processing Pipeline 9cbecf1a5522d50f9e67edb66e570922 https://www.encodeproject.org/files/ENCFF308IRW/@@download/ENCFF308IRW.bigWig hg19 released mild to moderate bottlenecking ENCFF653MIK bigWig fold change over control ENCSR168CEE ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA6-human ENCAB686QMA DNA False 2017-07-28 ENCODE 2 ENCFF834TUP, ENCFF982XUS 1321829988 ENCODE Processing Pipeline e6e575314dc6a6c8e5f6f1bae95bc62a https://www.encodeproject.org/files/ENCFF653MIK/@@download/ENCFF653MIK.bigWig hg19 released mild to moderate bottlenecking ENCFF547KCR bigWig fold change over control ENCSR168CEE ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA6-human ENCAB686QMA DNA False 2017-07-28 ENCODE 1, 2 ENCFF160VXC, ENCFF557UXG, ENCFF834TUP, ENCFF982XUS 2324760119 ENCODE Processing Pipeline 2a64d7de72dde727e40c6bc3c80bd82b https://www.encodeproject.org/files/ENCFF547KCR/@@download/ENCFF547KCR.bigWig hg19 released mild to moderate bottlenecking ENCFF647EHE bed narrowPeak peaks ENCSR168CEE ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA6-human ENCAB686QMA DNA False 2017-07-28 ENCODE 1 ENCFF160VXC, ENCFF557UXG 6810731 ENCODE Processing Pipeline eb698dad8929ad37dadb14376b02a824 https://www.encodeproject.org/files/ENCFF647EHE/@@download/ENCFF647EHE.bed.gz hg19 released mild to moderate bottlenecking ENCFF520CHA bed narrowPeak peaks ENCSR168CEE ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA6-human ENCAB686QMA DNA False 2017-07-28 ENCODE 2 ENCFF834TUP, ENCFF982XUS 6640626 ENCODE Processing Pipeline 3bc01a3e3799b65a9311bba589dadedc https://www.encodeproject.org/files/ENCFF520CHA/@@download/ENCFF520CHA.bed.gz hg19 released mild to moderate bottlenecking ENCFF996GWG bigBed narrowPeak peaks ENCSR168CEE ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA6-human ENCAB686QMA DNA False 2017-07-28 ENCODE 1 ENCFF647EHE 11220483 ENCODE Processing Pipeline 61f9955402c3810b33ed079330d17383 https://www.encodeproject.org/files/ENCFF996GWG/@@download/ENCFF996GWG.bigBed hg19 released mild to moderate bottlenecking ENCFF558GGF bed narrowPeak peaks ENCSR168CEE ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA6-human ENCAB686QMA DNA False 2017-07-28 ENCODE 1, 2 ENCFF160VXC, ENCFF557UXG, ENCFF834TUP, ENCFF982XUS 7158152 ENCODE Processing Pipeline 9aa9520c4e0f280d4685c9b292749ef9 https://www.encodeproject.org/files/ENCFF558GGF/@@download/ENCFF558GGF.bed.gz hg19 released mild to moderate bottlenecking ENCFF390EDP bigBed narrowPeak peaks ENCSR168CEE ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA6-human ENCAB686QMA DNA False 2017-07-28 ENCODE 1, 2 ENCFF558GGF 10813122 ENCODE Processing Pipeline 563aafe2a216c452471db0ab1c05ca3f https://www.encodeproject.org/files/ENCFF390EDP/@@download/ENCFF390EDP.bigBed hg19 released mild to moderate bottlenecking ENCFF762SIV bigBed narrowPeak peaks ENCSR168CEE ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA6-human ENCAB686QMA DNA False 2017-07-28 ENCODE 2 ENCFF520CHA 11121726 ENCODE Processing Pipeline bb778389fd6065caa5d7004256c21c4e https://www.encodeproject.org/files/ENCFF762SIV/@@download/ENCFF762SIV.bigBed hg19 released mild to moderate bottlenecking ENCFF962VRS bigBed narrowPeak conservative idr thresholded peaks ENCSR168CEE ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA6-human ENCAB686QMA DNA False 2017-07-28 ENCODE 1, 2 ENCFF758SJG 156755 ENCODE Processing Pipeline 3ccfe55872307ab0b17bd297c1b51ce5 https://www.encodeproject.org/files/ENCFF962VRS/@@download/ENCFF962VRS.bigBed hg19 released mild to moderate bottlenecking ENCFF758SJG bed narrowPeak conservative idr thresholded peaks ENCSR168CEE ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA6-human ENCAB686QMA DNA False 2017-07-28 ENCODE 1, 2 ENCFF001TDO, ENCFF520CHA, ENCFF558GGF, ENCFF647EHE 62749 ENCODE Processing Pipeline 57694830eaf58317b8d4f53ed5e892b7 https://www.encodeproject.org/files/ENCFF758SJG/@@download/ENCFF758SJG.bed.gz hg19 released mild to moderate bottlenecking ENCFF322DSX bed narrowPeak optimal idr thresholded peaks ENCSR168CEE ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA6-human ENCAB686QMA DNA False 2017-07-28 ENCODE 1, 2 ENCFF001TDO, ENCFF520CHA, ENCFF558GGF, ENCFF647EHE 88312 ENCODE Processing Pipeline 28762e7df97bdc9821817b1cd72eac8c https://www.encodeproject.org/files/ENCFF322DSX/@@download/ENCFF322DSX.bed.gz hg19 released mild to moderate bottlenecking ENCFF875HSP bigBed narrowPeak optimal idr thresholded peaks ENCSR168CEE ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA6-human ENCAB686QMA DNA False 2017-07-28 ENCODE 1, 2 ENCFF322DSX 230160 ENCODE Processing Pipeline 49d7f426ec1eeaa283b35974b20297bb https://www.encodeproject.org/files/ENCFF875HSP/@@download/ENCFF875HSP.bigBed hg19 released mild to moderate bottlenecking ENCFF554YRI bigWig signal p-value ENCSR168CEE ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA6-human ENCAB686QMA DNA False 2017-07-28 ENCODE 1 ENCFF790TAN, ENCFF910GRL 1106301847 ENCODE Processing Pipeline 54dd51e68d6c45a492fd60d9ecc76b06 https://www.encodeproject.org/files/ENCFF554YRI/@@download/ENCFF554YRI.bigWig GRCh38 released mild to moderate bottlenecking ENCFF839VWF bigWig signal p-value ENCSR168CEE ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA6-human ENCAB686QMA DNA False 2017-07-28 ENCODE 1, 2 ENCFF362KOB, ENCFF712WXB, ENCFF790TAN, ENCFF910GRL 1832444391 ENCODE Processing Pipeline da5b47a4e31225bb48b94be2a6edfe58 https://www.encodeproject.org/files/ENCFF839VWF/@@download/ENCFF839VWF.bigWig GRCh38 released mild to moderate bottlenecking ENCFF535AEY bigWig signal p-value ENCSR168CEE ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA6-human ENCAB686QMA DNA False 2017-07-28 ENCODE 2 ENCFF362KOB, ENCFF712WXB 1296280092 ENCODE Processing Pipeline ae9f0035e8820c0e202cb19841188d9b https://www.encodeproject.org/files/ENCFF535AEY/@@download/ENCFF535AEY.bigWig GRCh38 released mild to moderate bottlenecking ENCFF031FIJ bigWig fold change over control ENCSR168CEE ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA6-human ENCAB686QMA DNA False 2017-07-28 ENCODE 1 ENCFF790TAN, ENCFF910GRL 1394831378 ENCODE Processing Pipeline 109bcfb353502d47ee82967770189174 https://www.encodeproject.org/files/ENCFF031FIJ/@@download/ENCFF031FIJ.bigWig GRCh38 released mild to moderate bottlenecking ENCFF470JWT bigWig fold change over control ENCSR168CEE ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA6-human ENCAB686QMA DNA False 2017-07-28 ENCODE 2 ENCFF362KOB, ENCFF712WXB 1325351427 ENCODE Processing Pipeline 00f69f54470ade78772958e009d3dc11 https://www.encodeproject.org/files/ENCFF470JWT/@@download/ENCFF470JWT.bigWig GRCh38 released mild to moderate bottlenecking ENCFF051CKS bigWig fold change over control ENCSR168CEE ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA6-human ENCAB686QMA DNA False 2017-07-28 ENCODE 1, 2 ENCFF362KOB, ENCFF712WXB, ENCFF790TAN, ENCFF910GRL 2317513945 ENCODE Processing Pipeline 2fc6fde76b4281eb62c304aaa005e2d9 https://www.encodeproject.org/files/ENCFF051CKS/@@download/ENCFF051CKS.bigWig GRCh38 released mild to moderate bottlenecking ENCFF969WHZ bigBed narrowPeak peaks ENCSR168CEE ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA6-human ENCAB686QMA DNA False 2017-07-28 ENCODE 1, 2 ENCFF291ZTW 10829307 ENCODE Processing Pipeline 2eae9f631f8b1da06671c742247d722c https://www.encodeproject.org/files/ENCFF969WHZ/@@download/ENCFF969WHZ.bigBed GRCh38 released mild to moderate bottlenecking ENCFF601ZZJ bed narrowPeak conservative idr thresholded peaks ENCSR168CEE ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA6-human ENCAB686QMA DNA False 2017-07-28 ENCODE 1, 2 ENCFF291ZTW, ENCFF416DRI, ENCFF419RSJ, ENCFF539CDR 63704 ENCODE Processing Pipeline c51fe2506833980bb0af1596fca7408e https://www.encodeproject.org/files/ENCFF601ZZJ/@@download/ENCFF601ZZJ.bed.gz GRCh38 released mild to moderate bottlenecking ENCFF416DRI bed narrowPeak peaks ENCSR168CEE ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA6-human ENCAB686QMA DNA False 2017-07-28 ENCODE 1 ENCFF790TAN, ENCFF910GRL 6666541 ENCODE Processing Pipeline db7da79f83f28ea18aba0a846671809b https://www.encodeproject.org/files/ENCFF416DRI/@@download/ENCFF416DRI.bed.gz GRCh38 released mild to moderate bottlenecking ENCFF539CDR bed narrowPeak peaks ENCSR168CEE ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA6-human ENCAB686QMA DNA False 2017-07-28 ENCODE 2 ENCFF362KOB, ENCFF712WXB 6523459 ENCODE Processing Pipeline 98bfc3f724aa72fe8cf9d7e0fde427c9 https://www.encodeproject.org/files/ENCFF539CDR/@@download/ENCFF539CDR.bed.gz GRCh38 released mild to moderate bottlenecking ENCFF385MDJ bigBed narrowPeak peaks ENCSR168CEE ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA6-human ENCAB686QMA DNA False 2017-07-28 ENCODE 1 ENCFF416DRI 11231374 ENCODE Processing Pipeline c3f73b22033025794d41249b16eb438e https://www.encodeproject.org/files/ENCFF385MDJ/@@download/ENCFF385MDJ.bigBed GRCh38 released mild to moderate bottlenecking ENCFF674PZN bigBed narrowPeak peaks ENCSR168CEE ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA6-human ENCAB686QMA DNA False 2017-07-28 ENCODE 2 ENCFF539CDR 11132857 ENCODE Processing Pipeline 2fa617a5fd83c5d1f5aa4ff2208c18bd https://www.encodeproject.org/files/ENCFF674PZN/@@download/ENCFF674PZN.bigBed GRCh38 released mild to moderate bottlenecking ENCFF291ZTW bed narrowPeak peaks ENCSR168CEE ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA6-human ENCAB686QMA DNA False 2017-07-28 ENCODE 1, 2 ENCFF362KOB, ENCFF712WXB, ENCFF790TAN, ENCFF910GRL 7154672 ENCODE Processing Pipeline 5daae08872a5a7e2639ffdb95a5f003d https://www.encodeproject.org/files/ENCFF291ZTW/@@download/ENCFF291ZTW.bed.gz GRCh38 released mild to moderate bottlenecking ENCFF438BWN bed narrowPeak optimal idr thresholded peaks ENCSR168CEE ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA6-human ENCAB686QMA DNA False 2017-07-28 ENCODE 1, 2 ENCFF291ZTW, ENCFF416DRI, ENCFF419RSJ, ENCFF539CDR 89520 ENCODE Processing Pipeline 668c677f841ce7b7b005cdf1afaa9ff7 https://www.encodeproject.org/files/ENCFF438BWN/@@download/ENCFF438BWN.bed.gz GRCh38 released mild to moderate bottlenecking ENCFF841BDR bigBed narrowPeak conservative idr thresholded peaks ENCSR168CEE ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA6-human ENCAB686QMA DNA False 2017-07-28 ENCODE 1, 2 ENCFF601ZZJ 191300 ENCODE Processing Pipeline af32be699377fe644fc080157bb8c983 https://www.encodeproject.org/files/ENCFF841BDR/@@download/ENCFF841BDR.bigBed GRCh38 released mild to moderate bottlenecking ENCFF941BMX bigBed narrowPeak optimal idr thresholded peaks ENCSR168CEE ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA6-human ENCAB686QMA DNA False 2017-07-28 ENCODE 1, 2 ENCFF438BWN 233591 ENCODE Processing Pipeline d9e64b6c2ba9c086667af74a5a1c68e4 https://www.encodeproject.org/files/ENCFF941BMX/@@download/ENCFF941BMX.bigBed GRCh38 released mild to moderate bottlenecking ENCFF627HTL bam unfiltered alignments ENCSR788RSW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SOX6-human ENCAB000BOG DNA False 2014-07-07 ENCODE 1 100 ENCFF002DPJ, ENCFF002EGF, ENCFF807MUK 8579927803 ENCODE Processing Pipeline f0601bf1b103b6e7251fd0cfe348cfcb https://www.encodeproject.org/files/ENCFF627HTL/@@download/ENCFF627HTL.bam hg19 released mild to moderate bottlenecking ENCFF991ZLC bam unfiltered alignments ENCSR788RSW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SOX6-human ENCAB000BOG DNA False 2014-07-07 ENCODE 2 100 ENCFF002DPM, ENCFF002DUA, ENCFF807MUK 7830222655 ENCODE Processing Pipeline 45f9452477c3e65d81159338b22c6e1a https://www.encodeproject.org/files/ENCFF991ZLC/@@download/ENCFF991ZLC.bam hg19 released mild to moderate bottlenecking ENCFF002DPJ fastq reads ENCSR788RSW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SOX6-human ENCAB000BOG DNA False 2014-07-07 ENCODE 1 1 100 paired-ended 1 ENCFF002EGF 4173078656 Michael Snyder, Stanford fbc799e4689d93e528a5a5db3fd1a99e SRA:SRR6214388 https://www.encodeproject.org/files/ENCFF002DPJ/@@download/ENCFF002DPJ.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFF/ released mild to moderate bottlenecking ENCFF002DPM fastq reads ENCSR788RSW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SOX6-human ENCAB000BOG DNA False 2014-07-07 ENCODE 2 1 100 paired-ended 2 ENCFF002DUA 3697627399 Michael Snyder, Stanford 85bce0dc93257926329d8a823d3a35e9 SRA:SRR6214389 https://www.encodeproject.org/files/ENCFF002DPM/@@download/ENCFF002DPM.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFA/ released mild to moderate bottlenecking ENCFF002DUA fastq reads ENCSR788RSW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SOX6-human ENCAB000BOG DNA False 2014-07-07 ENCODE 2 1 100 paired-ended 1 ENCFF002DPM 3803308069 Michael Snyder, Stanford e07f12682a52e9a55bc4ea5e59885fed SRA:SRR6214389 https://www.encodeproject.org/files/ENCFF002DUA/@@download/ENCFF002DUA.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFD/ released mild to moderate bottlenecking ENCFF002EGF fastq reads ENCSR788RSW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SOX6-human ENCAB000BOG DNA False 2014-07-07 ENCODE 1 1 100 paired-ended 2 ENCFF002DPJ 4048302634 Michael Snyder, Stanford b3689a234ab0823589ed9862f379bf23 SRA:SRR6214388 https://www.encodeproject.org/files/ENCFF002EGF/@@download/ENCFF002EGF.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFH/ released mild to moderate bottlenecking ENCFF849SWB bam alignments ENCSR788RSW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SOX6-human ENCAB000BOG DNA False 2014-07-07 ENCODE 2 100 ENCFF002DPM, ENCFF002DUA, ENCFF807MUK 6237747688 ENCODE Processing Pipeline aa372d5953b5de7a2bc84f467b0fb4d9 https://www.encodeproject.org/files/ENCFF849SWB/@@download/ENCFF849SWB.bam hg19 released mild to moderate bottlenecking ENCFF952MSU bam alignments ENCSR788RSW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SOX6-human ENCAB000BOG DNA False 2014-07-07 ENCODE 1 100 ENCFF002DPJ, ENCFF002EGF, ENCFF807MUK 6820230208 ENCODE Processing Pipeline b481fd0016b01cae4a349d60b7656bc1 https://www.encodeproject.org/files/ENCFF952MSU/@@download/ENCFF952MSU.bam hg19 released mild to moderate bottlenecking ENCFF400URZ bigWig signal p-value ENCSR788RSW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SOX6-human ENCAB000BOG DNA False 2014-07-07 ENCODE 1 ENCFF581ZJL, ENCFF952MSU 1393662630 ENCODE Processing Pipeline 69c7c6d64bb68ffd34978663d8e6f336 https://www.encodeproject.org/files/ENCFF400URZ/@@download/ENCFF400URZ.bigWig hg19 released mild to moderate bottlenecking ENCFF549WOH bigWig fold change over control ENCSR788RSW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SOX6-human ENCAB000BOG DNA False 2014-07-07 ENCODE 1 ENCFF581ZJL, ENCFF952MSU 1507919681 ENCODE Processing Pipeline 7bf739cd4bbff942365d974649b13a07 https://www.encodeproject.org/files/ENCFF549WOH/@@download/ENCFF549WOH.bigWig hg19 released mild to moderate bottlenecking ENCFF244NNS bam unfiltered alignments ENCSR788RSW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SOX6-human ENCAB000BOG DNA False 2014-07-07 ENCODE 2 100 ENCFF002DPM, ENCFF002DUA, ENCFF643CGH 7834646660 ENCODE Processing Pipeline 2d0305fd72123035b20fd26d86c55b90 https://www.encodeproject.org/files/ENCFF244NNS/@@download/ENCFF244NNS.bam GRCh38 released mild to moderate bottlenecking ENCFF158AUC bam unfiltered alignments ENCSR788RSW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SOX6-human ENCAB000BOG DNA False 2014-07-07 ENCODE 1 100 ENCFF002DPJ, ENCFF002EGF, ENCFF643CGH 8585364284 ENCODE Processing Pipeline 1444ec02504facd3ada4471a2ff6eefb https://www.encodeproject.org/files/ENCFF158AUC/@@download/ENCFF158AUC.bam GRCh38 released mild to moderate bottlenecking ENCFF022LJH bam alignments ENCSR788RSW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SOX6-human ENCAB000BOG DNA False 2014-07-07 ENCODE 2 100 ENCFF002DPM, ENCFF002DUA, ENCFF643CGH 6238605838 ENCODE Processing Pipeline 83f796f0789f223986efa3fb6b340567 https://www.encodeproject.org/files/ENCFF022LJH/@@download/ENCFF022LJH.bam GRCh38 released mild to moderate bottlenecking ENCFF508MVS bam alignments ENCSR788RSW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SOX6-human ENCAB000BOG DNA False 2014-07-07 ENCODE 1 100 ENCFF002DPJ, ENCFF002EGF, ENCFF643CGH 6822072754 ENCODE Processing Pipeline 430b6b4a27b86a564413df24f76a4db2 https://www.encodeproject.org/files/ENCFF508MVS/@@download/ENCFF508MVS.bam GRCh38 released mild to moderate bottlenecking ENCFF354DLU bigWig signal p-value ENCSR788RSW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SOX6-human ENCAB000BOG DNA False 2014-07-07 ENCODE 1 ENCFF508MVS, ENCFF910IKB 1214703027 ENCODE Processing Pipeline 44ec9dd9434156e65239880892ccf66f https://www.encodeproject.org/files/ENCFF354DLU/@@download/ENCFF354DLU.bigWig GRCh38 released mild to moderate bottlenecking ENCFF487XCW bigWig signal p-value ENCSR788RSW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SOX6-human ENCAB000BOG DNA False 2014-07-07 ENCODE 2 ENCFF022LJH, ENCFF227IZS 1252481064 ENCODE Processing Pipeline b05b7fcd9d12230a5828d4b78cc3f456 https://www.encodeproject.org/files/ENCFF487XCW/@@download/ENCFF487XCW.bigWig GRCh38 released mild to moderate bottlenecking ENCFF891HZK bigWig signal p-value ENCSR788RSW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SOX6-human ENCAB000BOG DNA False 2014-07-07 ENCODE 1, 2 ENCFF022LJH, ENCFF227IZS, ENCFF508MVS, ENCFF910IKB 1896881299 ENCODE Processing Pipeline 2079b19f35e0a6018f1a8293fa493ca1 https://www.encodeproject.org/files/ENCFF891HZK/@@download/ENCFF891HZK.bigWig GRCh38 released mild to moderate bottlenecking ENCFF157CSA bigWig fold change over control ENCSR788RSW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SOX6-human ENCAB000BOG DNA False 2014-07-07 ENCODE 1 ENCFF508MVS, ENCFF910IKB 1510157786 ENCODE Processing Pipeline 8800c1794e2a8cb1fcabbacaa9876af8 https://www.encodeproject.org/files/ENCFF157CSA/@@download/ENCFF157CSA.bigWig GRCh38 released mild to moderate bottlenecking ENCFF783QQF bigWig fold change over control ENCSR788RSW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SOX6-human ENCAB000BOG DNA False 2014-07-07 ENCODE 2 ENCFF022LJH, ENCFF227IZS 1340297306 ENCODE Processing Pipeline 92425cb25b0e8ec0c415163e3d1cb1fc https://www.encodeproject.org/files/ENCFF783QQF/@@download/ENCFF783QQF.bigWig GRCh38 released mild to moderate bottlenecking ENCFF049NNZ bigWig fold change over control ENCSR788RSW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SOX6-human ENCAB000BOG DNA False 2014-07-07 ENCODE 1, 2 ENCFF022LJH, ENCFF227IZS, ENCFF508MVS, ENCFF910IKB 2417219818 ENCODE Processing Pipeline aba8c0b737c67963867b57cdd39f54d3 https://www.encodeproject.org/files/ENCFF049NNZ/@@download/ENCFF049NNZ.bigWig GRCh38 released mild to moderate bottlenecking ENCFF895WCF bed narrowPeak peaks ENCSR788RSW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SOX6-human ENCAB000BOG DNA False 2014-07-07 ENCODE 2 ENCFF022LJH, ENCFF227IZS 7044455 ENCODE Processing Pipeline c0d8633482c801bc7ff4c4b88d0c77ff https://www.encodeproject.org/files/ENCFF895WCF/@@download/ENCFF895WCF.bed.gz GRCh38 released mild to moderate bottlenecking ENCFF604MQF bed narrowPeak peaks ENCSR788RSW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SOX6-human ENCAB000BOG DNA False 2014-07-07 ENCODE 1 ENCFF508MVS, ENCFF910IKB 6931962 ENCODE Processing Pipeline 60ac8fa3a1633e1ae9083554986d5181 https://www.encodeproject.org/files/ENCFF604MQF/@@download/ENCFF604MQF.bed.gz GRCh38 released mild to moderate bottlenecking ENCFF477QJR bed narrowPeak peaks ENCSR788RSW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SOX6-human ENCAB000BOG DNA False 2014-07-07 ENCODE 1, 2 ENCFF022LJH, ENCFF227IZS, ENCFF508MVS, ENCFF910IKB 7257974 ENCODE Processing Pipeline f8fcf9d6e1e22c3bc367c87b03c60c5c https://www.encodeproject.org/files/ENCFF477QJR/@@download/ENCFF477QJR.bed.gz GRCh38 released mild to moderate bottlenecking ENCFF339YYL bigBed narrowPeak peaks ENCSR788RSW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SOX6-human ENCAB000BOG DNA False 2014-07-07 ENCODE 1 ENCFF604MQF 13309550 ENCODE Processing Pipeline 87d6fa3349871818da019218310870c3 https://www.encodeproject.org/files/ENCFF339YYL/@@download/ENCFF339YYL.bigBed GRCh38 released mild to moderate bottlenecking ENCFF956JQI bigBed narrowPeak peaks ENCSR788RSW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SOX6-human ENCAB000BOG DNA False 2014-07-07 ENCODE 1, 2 ENCFF477QJR 13263338 ENCODE Processing Pipeline 4552becc7861f5c11125dbc71e4285ca https://www.encodeproject.org/files/ENCFF956JQI/@@download/ENCFF956JQI.bigBed GRCh38 released mild to moderate bottlenecking ENCFF950RZR bigBed narrowPeak conservative idr thresholded peaks ENCSR788RSW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SOX6-human ENCAB000BOG DNA False 2014-07-07 ENCODE 1, 2 ENCFF251SPU 1027047 ENCODE Processing Pipeline 4acd107c1137b90df47d38f56e6be0c6 https://www.encodeproject.org/files/ENCFF950RZR/@@download/ENCFF950RZR.bigBed GRCh38 released mild to moderate bottlenecking ENCFF280GNH bigBed narrowPeak peaks ENCSR788RSW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SOX6-human ENCAB000BOG DNA False 2014-07-07 ENCODE 2 ENCFF895WCF 13231395 ENCODE Processing Pipeline 3ae94409b0fcfa3c4239e5efc498e290 https://www.encodeproject.org/files/ENCFF280GNH/@@download/ENCFF280GNH.bigBed GRCh38 released mild to moderate bottlenecking ENCFF251SPU bed narrowPeak conservative idr thresholded peaks ENCSR788RSW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SOX6-human ENCAB000BOG DNA False 2014-07-07 ENCODE 1, 2 ENCFF419RSJ, ENCFF477QJR, ENCFF604MQF, ENCFF895WCF 499744 ENCODE Processing Pipeline 93cf639e3819eb38dd6147304b6feafe https://www.encodeproject.org/files/ENCFF251SPU/@@download/ENCFF251SPU.bed.gz GRCh38 released mild to moderate bottlenecking ENCFF431STY bed narrowPeak optimal idr thresholded peaks ENCSR788RSW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SOX6-human ENCAB000BOG DNA False 2014-07-07 ENCODE 1, 2 ENCFF419RSJ, ENCFF477QJR, ENCFF604MQF, ENCFF895WCF 664255 ENCODE Processing Pipeline 53acd783fa28f833f0c3f047a2fd7f1f https://www.encodeproject.org/files/ENCFF431STY/@@download/ENCFF431STY.bed.gz GRCh38 released mild to moderate bottlenecking ENCFF290IKB bigBed narrowPeak optimal idr thresholded peaks ENCSR788RSW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SOX6-human ENCAB000BOG DNA False 2014-07-07 ENCODE 1, 2 ENCFF431STY 1276742 ENCODE Processing Pipeline 5c953d2dfceeb9ff9066611050852190 https://www.encodeproject.org/files/ENCFF290IKB/@@download/ENCFF290IKB.bigBed GRCh38 released mild to moderate bottlenecking ENCFF459VPD bigWig signal p-value ENCSR788RSW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SOX6-human ENCAB000BOG DNA False 2014-07-07 ENCODE 2 ENCFF051LWI, ENCFF849SWB 1230384053 ENCODE Processing Pipeline 252420f12221641be49c280dd78f637d https://www.encodeproject.org/files/ENCFF459VPD/@@download/ENCFF459VPD.bigWig hg19 released mild to moderate bottlenecking ENCFF275NIZ bigWig signal p-value ENCSR788RSW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SOX6-human ENCAB000BOG DNA False 2014-07-07 ENCODE 1, 2 ENCFF051LWI, ENCFF581ZJL, ENCFF849SWB, ENCFF952MSU 2054951159 ENCODE Processing Pipeline bda5c8fc21305898894a42d01a332443 https://www.encodeproject.org/files/ENCFF275NIZ/@@download/ENCFF275NIZ.bigWig hg19 released mild to moderate bottlenecking ENCFF479LSR bigWig fold change over control ENCSR788RSW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SOX6-human ENCAB000BOG DNA False 2014-07-07 ENCODE 2 ENCFF051LWI, ENCFF849SWB 1339040635 ENCODE Processing Pipeline cd6be63e1bb1129f28cdf87091a31a55 https://www.encodeproject.org/files/ENCFF479LSR/@@download/ENCFF479LSR.bigWig hg19 released mild to moderate bottlenecking ENCFF669NWG bed narrowPeak peaks ENCSR788RSW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SOX6-human ENCAB000BOG DNA False 2014-07-07 ENCODE 1, 2 ENCFF051LWI, ENCFF581ZJL, ENCFF849SWB, ENCFF952MSU 7252192 ENCODE Processing Pipeline 266f1bee56fdf2ea31ee6a6bf846a2fa https://www.encodeproject.org/files/ENCFF669NWG/@@download/ENCFF669NWG.bed.gz hg19 released mild to moderate bottlenecking ENCFF214NEU bigBed narrowPeak peaks ENCSR788RSW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SOX6-human ENCAB000BOG DNA False 2014-07-07 ENCODE 1, 2 ENCFF669NWG 13248776 ENCODE Processing Pipeline 4e8839c113fca60f77f5d9613115a609 https://www.encodeproject.org/files/ENCFF214NEU/@@download/ENCFF214NEU.bigBed hg19 released mild to moderate bottlenecking ENCFF757HAQ bigWig fold change over control ENCSR788RSW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SOX6-human ENCAB000BOG DNA False 2014-07-07 ENCODE 1, 2 ENCFF051LWI, ENCFF581ZJL, ENCFF849SWB, ENCFF952MSU 2443407353 ENCODE Processing Pipeline 20110fc9441bd04b1d0fa272ff63a917 https://www.encodeproject.org/files/ENCFF757HAQ/@@download/ENCFF757HAQ.bigWig hg19 released mild to moderate bottlenecking ENCFF954EOW bed narrowPeak peaks ENCSR788RSW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SOX6-human ENCAB000BOG DNA False 2014-07-07 ENCODE 1 ENCFF581ZJL, ENCFF952MSU 6924185 ENCODE Processing Pipeline d52ba4e7f65b735d615e3d4954ce9202 https://www.encodeproject.org/files/ENCFF954EOW/@@download/ENCFF954EOW.bed.gz hg19 released mild to moderate bottlenecking ENCFF900AXN bigBed narrowPeak peaks ENCSR788RSW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SOX6-human ENCAB000BOG DNA False 2014-07-07 ENCODE 2 ENCFF221LMV 13130178 ENCODE Processing Pipeline 0650f2a26cef49746981e76f5cc00bd8 https://www.encodeproject.org/files/ENCFF900AXN/@@download/ENCFF900AXN.bigBed hg19 released mild to moderate bottlenecking ENCFF353GUG bed narrowPeak conservative idr thresholded peaks ENCSR788RSW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SOX6-human ENCAB000BOG DNA False 2014-07-07 ENCODE 1, 2 ENCFF001TDO, ENCFF221LMV, ENCFF669NWG, ENCFF954EOW 498959 ENCODE Processing Pipeline 196208a8172a3728850a143276a9b492 https://www.encodeproject.org/files/ENCFF353GUG/@@download/ENCFF353GUG.bed.gz hg19 released mild to moderate bottlenecking ENCFF221LMV bed narrowPeak peaks ENCSR788RSW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SOX6-human ENCAB000BOG DNA False 2014-07-07 ENCODE 2 ENCFF051LWI, ENCFF849SWB 6968495 ENCODE Processing Pipeline 4f52730587772f0e911e79139e031afe https://www.encodeproject.org/files/ENCFF221LMV/@@download/ENCFF221LMV.bed.gz hg19 released mild to moderate bottlenecking ENCFF525ZBG bigBed narrowPeak peaks ENCSR788RSW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SOX6-human ENCAB000BOG DNA False 2014-07-07 ENCODE 1 ENCFF954EOW 13292494 ENCODE Processing Pipeline 67a6d020777e236614043ad287bba51a https://www.encodeproject.org/files/ENCFF525ZBG/@@download/ENCFF525ZBG.bigBed hg19 released mild to moderate bottlenecking ENCFF241TBP bed narrowPeak optimal idr thresholded peaks ENCSR788RSW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SOX6-human ENCAB000BOG DNA False 2014-07-07 ENCODE 1, 2 ENCFF001TDO, ENCFF221LMV, ENCFF669NWG, ENCFF954EOW 662988 ENCODE Processing Pipeline ddfe5ef7a5a81e0d8353f3f421ca1c7b https://www.encodeproject.org/files/ENCFF241TBP/@@download/ENCFF241TBP.bed.gz hg19 released mild to moderate bottlenecking ENCFF283IFS bigBed narrowPeak optimal idr thresholded peaks ENCSR788RSW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SOX6-human ENCAB000BOG DNA False 2014-07-07 ENCODE 1, 2 ENCFF241TBP 1274060 ENCODE Processing Pipeline b918e752e103d79aa92daf65cddb798c https://www.encodeproject.org/files/ENCFF283IFS/@@download/ENCFF283IFS.bigBed hg19 released mild to moderate bottlenecking ENCFF252KMY bigBed narrowPeak conservative idr thresholded peaks ENCSR788RSW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SOX6-human ENCAB000BOG DNA False 2014-07-07 ENCODE 1, 2 ENCFF353GUG 1024670 ENCODE Processing Pipeline 27ba2553d50b9b8812ad6b696b8b1f1a https://www.encodeproject.org/files/ENCFF252KMY/@@download/ENCFF252KMY.bigBed hg19 released mild to moderate bottlenecking ENCFF315AUP bam unfiltered alignments ENCSR658WFQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA1-human ENCAB585QVB DNA False 2018-01-26 ENCODE 2 100 ENCFF730DID, ENCFF807MUK, ENCFF907WUT 5172771042 ENCODE Processing Pipeline 491c510bfba5c44fc8232be59d1c5720 https://www.encodeproject.org/files/ENCFF315AUP/@@download/ENCFF315AUP.bam hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF196PEZ bam unfiltered alignments ENCSR658WFQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA1-human ENCAB585QVB DNA False 2018-01-26 ENCODE 1 100 ENCFF399SYU, ENCFF560UZF, ENCFF807MUK 4970206156 ENCODE Processing Pipeline 1a9375c7b2121ff93855d6f15c073b6c https://www.encodeproject.org/files/ENCFF196PEZ/@@download/ENCFF196PEZ.bam hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF399SYU fastq reads ENCSR658WFQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA1-human ENCAB585QVB DNA False 2018-01-26 ENCODE 1 1 100 paired-ended 2 ENCFF560UZF 2414414005 Michael Snyder, Stanford 71e67dee6c4cced8dc847377a8cf8e9f https://www.encodeproject.org/files/ENCFF399SYU/@@download/ENCFF399SYU.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFH/ released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF560UZF fastq reads ENCSR658WFQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA1-human ENCAB585QVB DNA False 2018-01-26 ENCODE 1 1 100 paired-ended 1 ENCFF399SYU 2328512787 Michael Snyder, Stanford 874b91955b5d29379da5562177754774 https://www.encodeproject.org/files/ENCFF560UZF/@@download/ENCFF560UZF.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFF/ released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF907WUT fastq reads ENCSR658WFQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA1-human ENCAB585QVB DNA False 2018-01-26 ENCODE 2 1 100 paired-ended 1 ENCFF730DID 2403440501 Michael Snyder, Stanford be1aeea0395a97831a822b3cf9c5922f https://www.encodeproject.org/files/ENCFF907WUT/@@download/ENCFF907WUT.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFD/ released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF730DID fastq reads ENCSR658WFQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA1-human ENCAB585QVB DNA False 2018-01-26 ENCODE 2 1 100 paired-ended 2 ENCFF907WUT 2513644974 Michael Snyder, Stanford f1060768a511c7b9bf05dd19b7ab16d6 https://www.encodeproject.org/files/ENCFF730DID/@@download/ENCFF730DID.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFA/ released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF875UQI bam alignments ENCSR658WFQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA1-human ENCAB585QVB DNA False 2018-01-26 ENCODE 2 100 ENCFF730DID, ENCFF807MUK, ENCFF907WUT 3522040864 ENCODE Processing Pipeline 1312fdcb151c4c02d72b8ed14d2303cb https://www.encodeproject.org/files/ENCFF875UQI/@@download/ENCFF875UQI.bam hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF901AKT bam alignments ENCSR658WFQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA1-human ENCAB585QVB DNA False 2018-01-26 ENCODE 1 100 ENCFF399SYU, ENCFF560UZF, ENCFF807MUK 3394920920 ENCODE Processing Pipeline 549c06c2712bbb06b9b23c388bf82305 https://www.encodeproject.org/files/ENCFF901AKT/@@download/ENCFF901AKT.bam hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF619OWC bigWig signal p-value ENCSR658WFQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA1-human ENCAB585QVB DNA False 2018-01-26 ENCODE 1 ENCFF581ZJL, ENCFF901AKT 956136611 ENCODE Processing Pipeline 24f9a44a76a12b07eeeea411a95105fe https://www.encodeproject.org/files/ENCFF619OWC/@@download/ENCFF619OWC.bigWig hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF253KSO bigWig signal p-value ENCSR658WFQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA1-human ENCAB585QVB DNA False 2018-01-26 ENCODE 2 ENCFF051LWI, ENCFF875UQI 1059193381 ENCODE Processing Pipeline 64710733e797a4f6e63f071dd8d6b8ae https://www.encodeproject.org/files/ENCFF253KSO/@@download/ENCFF253KSO.bigWig hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF550NRP bigWig signal p-value ENCSR658WFQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA1-human ENCAB585QVB DNA False 2018-01-26 ENCODE 1, 2 ENCFF051LWI, ENCFF581ZJL, ENCFF875UQI, ENCFF901AKT 1926659358 ENCODE Processing Pipeline 15c56627eb70772b16ab293958588fab https://www.encodeproject.org/files/ENCFF550NRP/@@download/ENCFF550NRP.bigWig hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF010QOB bigWig fold change over control ENCSR658WFQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA1-human ENCAB585QVB DNA False 2018-01-26 ENCODE 1 ENCFF581ZJL, ENCFF901AKT 1054843279 ENCODE Processing Pipeline a75ba17ec937b99ed231ddb20b7d844a https://www.encodeproject.org/files/ENCFF010QOB/@@download/ENCFF010QOB.bigWig hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF680JFI bigWig fold change over control ENCSR658WFQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA1-human ENCAB585QVB DNA False 2018-01-26 ENCODE 2 ENCFF051LWI, ENCFF875UQI 1040900075 ENCODE Processing Pipeline dd2299aad1ecdb1dde9f39a30f16c207 https://www.encodeproject.org/files/ENCFF680JFI/@@download/ENCFF680JFI.bigWig hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF876JSE bigWig fold change over control ENCSR658WFQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA1-human ENCAB585QVB DNA False 2018-01-26 ENCODE 1, 2 ENCFF051LWI, ENCFF581ZJL, ENCFF875UQI, ENCFF901AKT 1973676776 ENCODE Processing Pipeline 430be263bc37526544471f80f9bd1c82 https://www.encodeproject.org/files/ENCFF876JSE/@@download/ENCFF876JSE.bigWig hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF900BSR bed narrowPeak peaks ENCSR658WFQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA1-human ENCAB585QVB DNA False 2018-01-26 ENCODE 1 ENCFF581ZJL, ENCFF901AKT 6741528 ENCODE Processing Pipeline 58128ad5ec746ec21a387510fb287e67 https://www.encodeproject.org/files/ENCFF900BSR/@@download/ENCFF900BSR.bed.gz hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF904VPX bed narrowPeak peaks ENCSR658WFQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA1-human ENCAB585QVB DNA False 2018-01-26 ENCODE 1, 2 ENCFF051LWI, ENCFF581ZJL, ENCFF875UQI, ENCFF901AKT 7227830 ENCODE Processing Pipeline 44322f9f6d4443ab81f6a7cf06b7443b https://www.encodeproject.org/files/ENCFF904VPX/@@download/ENCFF904VPX.bed.gz hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF017TYA bed narrowPeak peaks ENCSR658WFQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA1-human ENCAB585QVB DNA False 2018-01-26 ENCODE 2 ENCFF051LWI, ENCFF875UQI 6781599 ENCODE Processing Pipeline 407ee578b0bb09c7021d00bb1deb39b3 https://www.encodeproject.org/files/ENCFF017TYA/@@download/ENCFF017TYA.bed.gz hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF921TZS bigBed narrowPeak peaks ENCSR658WFQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA1-human ENCAB585QVB DNA False 2018-01-26 ENCODE 1, 2 ENCFF904VPX 13026634 ENCODE Processing Pipeline ebe2cb65843edb0e803bfb0fac59eeb0 https://www.encodeproject.org/files/ENCFF921TZS/@@download/ENCFF921TZS.bigBed hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF633BIT bigBed narrowPeak peaks ENCSR658WFQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA1-human ENCAB585QVB DNA False 2018-01-26 ENCODE 1 ENCFF900BSR 13278952 ENCODE Processing Pipeline 2104c6e874fc551646b528e477f37878 https://www.encodeproject.org/files/ENCFF633BIT/@@download/ENCFF633BIT.bigBed hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF349NJS bigBed narrowPeak peaks ENCSR658WFQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA1-human ENCAB585QVB DNA False 2018-01-26 ENCODE 2 ENCFF017TYA 13160895 ENCODE Processing Pipeline 30eb164708700a03bf3991cd0ff923ab https://www.encodeproject.org/files/ENCFF349NJS/@@download/ENCFF349NJS.bigBed hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF558JEK bam unfiltered alignments ENCSR658WFQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA1-human ENCAB585QVB DNA False 2018-01-26 ENCODE 2 100 ENCFF643CGH, ENCFF730DID, ENCFF907WUT 5172698893 ENCODE Processing Pipeline 5fe0b62de72b54626324e12b36fe92ec https://www.encodeproject.org/files/ENCFF558JEK/@@download/ENCFF558JEK.bam GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF905LTM bam unfiltered alignments ENCSR658WFQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA1-human ENCAB585QVB DNA False 2018-01-26 ENCODE 1 100 ENCFF399SYU, ENCFF560UZF, ENCFF643CGH 4970272109 ENCODE Processing Pipeline c42185b82fdd23b31f08003136866812 https://www.encodeproject.org/files/ENCFF905LTM/@@download/ENCFF905LTM.bam GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF681JLI bam alignments ENCSR658WFQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA1-human ENCAB585QVB DNA False 2018-01-26 ENCODE 2 100 ENCFF643CGH, ENCFF730DID, ENCFF907WUT 3524857162 ENCODE Processing Pipeline 5f9eea0b7f045370b7a0d5a6e4afb60b https://www.encodeproject.org/files/ENCFF681JLI/@@download/ENCFF681JLI.bam GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF897GZC bam alignments ENCSR658WFQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA1-human ENCAB585QVB DNA False 2018-01-26 ENCODE 1 100 ENCFF399SYU, ENCFF560UZF, ENCFF643CGH 3396784223 ENCODE Processing Pipeline 5ebbc02ac8317ee2d1ced8e7a92f3cfb https://www.encodeproject.org/files/ENCFF897GZC/@@download/ENCFF897GZC.bam GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF401CKU bigWig signal p-value ENCSR658WFQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA1-human ENCAB585QVB DNA False 2018-01-26 ENCODE 1 ENCFF897GZC, ENCFF910IKB 1014617979 ENCODE Processing Pipeline 9dd3a3c899c057ccb4ea703b0734749b https://www.encodeproject.org/files/ENCFF401CKU/@@download/ENCFF401CKU.bigWig GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF743EIJ bigWig signal p-value ENCSR658WFQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA1-human ENCAB585QVB DNA False 2018-01-26 ENCODE 2 ENCFF227IZS, ENCFF681JLI 1066019238 ENCODE Processing Pipeline 57c9417dc9dbf9780907dab9360ea469 https://www.encodeproject.org/files/ENCFF743EIJ/@@download/ENCFF743EIJ.bigWig GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF504DZL bigWig signal p-value ENCSR658WFQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA1-human ENCAB585QVB DNA False 2018-01-26 ENCODE 1, 2 ENCFF227IZS, ENCFF681JLI, ENCFF897GZC, ENCFF910IKB 1589196903 ENCODE Processing Pipeline 70c1d2e7b33a09aeea8bd0e03519990d https://www.encodeproject.org/files/ENCFF504DZL/@@download/ENCFF504DZL.bigWig GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF843GVQ bigWig fold change over control ENCSR658WFQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA1-human ENCAB585QVB DNA False 2018-01-26 ENCODE 1 ENCFF897GZC, ENCFF910IKB 1064081317 ENCODE Processing Pipeline c86eae51373874e418b08916d4fe84a7 https://www.encodeproject.org/files/ENCFF843GVQ/@@download/ENCFF843GVQ.bigWig GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF303TME bigWig fold change over control ENCSR658WFQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA1-human ENCAB585QVB DNA False 2018-01-26 ENCODE 2 ENCFF227IZS, ENCFF681JLI 1039441344 ENCODE Processing Pipeline 99a62a9b53b9706099793f79725fea94 https://www.encodeproject.org/files/ENCFF303TME/@@download/ENCFF303TME.bigWig GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF468WLM bigWig fold change over control ENCSR658WFQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA1-human ENCAB585QVB DNA False 2018-01-26 ENCODE 1, 2 ENCFF227IZS, ENCFF681JLI, ENCFF897GZC, ENCFF910IKB 1960757959 ENCODE Processing Pipeline e3c1ebf894fd642c03cf2469aa0487b4 https://www.encodeproject.org/files/ENCFF468WLM/@@download/ENCFF468WLM.bigWig GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF721MEV bed narrowPeak peaks ENCSR658WFQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA1-human ENCAB585QVB DNA False 2018-01-26 ENCODE 1 ENCFF897GZC, ENCFF910IKB 6579077 ENCODE Processing Pipeline bdf2afebe4d760d8dd477b07efa746c4 https://www.encodeproject.org/files/ENCFF721MEV/@@download/ENCFF721MEV.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF345WGJ bed narrowPeak peaks ENCSR658WFQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA1-human ENCAB585QVB DNA False 2018-01-26 ENCODE 2 ENCFF227IZS, ENCFF681JLI 6624056 ENCODE Processing Pipeline 66b0f8373c0478b999d3c9bf0f3ad02d https://www.encodeproject.org/files/ENCFF345WGJ/@@download/ENCFF345WGJ.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF743HZW bed narrowPeak peaks ENCSR658WFQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA1-human ENCAB585QVB DNA False 2018-01-26 ENCODE 1, 2 ENCFF227IZS, ENCFF681JLI, ENCFF897GZC, ENCFF910IKB 7185552 ENCODE Processing Pipeline 6b73a9c2e87c9ffe712b5db9e8f0f181 https://www.encodeproject.org/files/ENCFF743HZW/@@download/ENCFF743HZW.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF795FFU bigBed narrowPeak peaks ENCSR658WFQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA1-human ENCAB585QVB DNA False 2018-01-26 ENCODE 2 ENCFF345WGJ 13124847 ENCODE Processing Pipeline ad17aca022c4cff86b8929b12ee48bc7 https://www.encodeproject.org/files/ENCFF795FFU/@@download/ENCFF795FFU.bigBed GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF270UNZ bigBed narrowPeak peaks ENCSR658WFQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA1-human ENCAB585QVB DNA False 2018-01-26 ENCODE 1 ENCFF721MEV 13239447 ENCODE Processing Pipeline cc2247ec10be92b34d721973454619c1 https://www.encodeproject.org/files/ENCFF270UNZ/@@download/ENCFF270UNZ.bigBed GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF724SSF bigBed narrowPeak peaks ENCSR658WFQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA1-human ENCAB585QVB DNA False 2018-01-26 ENCODE 1, 2 ENCFF743HZW 12988606 ENCODE Processing Pipeline b1d1157e9c29ef4154e32729123e5fa2 https://www.encodeproject.org/files/ENCFF724SSF/@@download/ENCFF724SSF.bigBed GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF852MFA bed narrowPeak conservative idr thresholded peaks ENCSR658WFQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA1-human ENCAB585QVB DNA False 2018-01-26 ENCODE 1, 2 ENCFF345WGJ, ENCFF419RSJ, ENCFF721MEV, ENCFF743HZW 290117 ENCODE Processing Pipeline d3aa65070ed1dc10cad932dae28c931c https://www.encodeproject.org/files/ENCFF852MFA/@@download/ENCFF852MFA.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF474QDS bed narrowPeak optimal idr thresholded peaks ENCSR658WFQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA1-human ENCAB585QVB DNA False 2018-01-26 ENCODE 1, 2 ENCFF345WGJ, ENCFF419RSJ, ENCFF721MEV, ENCFF743HZW 412523 ENCODE Processing Pipeline 8a46781063384c72279f3b61d09cf95d https://www.encodeproject.org/files/ENCFF474QDS/@@download/ENCFF474QDS.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF542HTF bigBed narrowPeak conservative idr thresholded peaks ENCSR658WFQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA1-human ENCAB585QVB DNA False 2018-01-26 ENCODE 1, 2 ENCFF852MFA 636611 ENCODE Processing Pipeline 88199cddac229181a6e7b50027601e1c https://www.encodeproject.org/files/ENCFF542HTF/@@download/ENCFF542HTF.bigBed GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF358PCQ bigBed narrowPeak optimal idr thresholded peaks ENCSR658WFQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA1-human ENCAB585QVB DNA False 2018-01-26 ENCODE 1, 2 ENCFF474QDS 833043 ENCODE Processing Pipeline 4fd17387b03686383d3711205f3eb10a https://www.encodeproject.org/files/ENCFF358PCQ/@@download/ENCFF358PCQ.bigBed GRCh38 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF774BFB bigBed narrowPeak conservative idr thresholded peaks ENCSR658WFQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA1-human ENCAB585QVB DNA False 2018-01-26 ENCODE 1, 2 ENCFF271LVS 466008 ENCODE Processing Pipeline 1d6b669b9bfea1b13ec5a62f33b8e1a8 https://www.encodeproject.org/files/ENCFF774BFB/@@download/ENCFF774BFB.bigBed hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF271LVS bed narrowPeak conservative idr thresholded peaks ENCSR658WFQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA1-human ENCAB585QVB DNA False 2018-01-26 ENCODE 1, 2 ENCFF001TDO, ENCFF017TYA, ENCFF900BSR, ENCFF904VPX 249210 ENCODE Processing Pipeline 35dd92df5e311abb582f2df352e544cc https://www.encodeproject.org/files/ENCFF271LVS/@@download/ENCFF271LVS.bed.gz hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF073LXQ bigBed narrowPeak optimal idr thresholded peaks ENCSR658WFQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA1-human ENCAB585QVB DNA False 2018-01-26 ENCODE 1, 2 ENCFF297JZQ 613805 ENCODE Processing Pipeline 0be9e53817abdb74482155faf4823160 https://www.encodeproject.org/files/ENCFF073LXQ/@@download/ENCFF073LXQ.bigBed hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF297JZQ bed narrowPeak optimal idr thresholded peaks ENCSR658WFQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOA1-human ENCAB585QVB DNA False 2018-01-26 ENCODE 1, 2 ENCFF001TDO, ENCFF017TYA, ENCFF900BSR, ENCFF904VPX 366322 ENCODE Processing Pipeline d78ea51f6aa867de601e3cf900656fb7 https://www.encodeproject.org/files/ENCFF297JZQ/@@download/ENCFF297JZQ.bed.gz hg19 released low read depth, mild to moderate bottlenecking experiment not submitted to GEO partially characterized antibody ENCFF850SND bam unfiltered alignments ENCSR618GDK ChIP-seq EFO:0002067 K562 cell line Homo sapiens CEBPZ-human ENCAB000ADO DNA False 2014-07-07 ENCODE 1 36 ENCFF002EEE, ENCFF807MUK 1015450211 ENCODE Processing Pipeline 506cd27a56c8206d4a6272cf1ada8131 https://www.encodeproject.org/files/ENCFF850SND/@@download/ENCFF850SND.bam hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length ENCFF235XWE bam unfiltered alignments ENCSR618GDK ChIP-seq EFO:0002067 K562 cell line Homo sapiens CEBPZ-human ENCAB000ADO DNA False 2014-07-07 ENCODE 4 36 ENCFF002EEI, ENCFF807MUK 1189920576 ENCODE Processing Pipeline 4c39c900870220e99de8f5a5e92c9a9e https://www.encodeproject.org/files/ENCFF235XWE/@@download/ENCFF235XWE.bam hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length ENCFF575XHE bigWig fold change over control ENCSR618GDK ChIP-seq EFO:0002067 K562 cell line Homo sapiens CEBPZ-human ENCAB000ADO DNA False 2014-07-07 ENCODE 1 ENCFF335IPE, ENCFF707DVP 381997465 ENCODE Processing Pipeline daa8db2e5c8632e2790b3dd3d150c382 https://www.encodeproject.org/files/ENCFF575XHE/@@download/ENCFF575XHE.bigWig hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length ENCFF475PLE bigWig signal p-value ENCSR618GDK ChIP-seq EFO:0002067 K562 cell line Homo sapiens CEBPZ-human ENCAB000ADO DNA False 2014-07-07 ENCODE 1 ENCFF335IPE, ENCFF707DVP 501900155 ENCODE Processing Pipeline e664318e8a0fd271eada1e761b382475 https://www.encodeproject.org/files/ENCFF475PLE/@@download/ENCFF475PLE.bigWig hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length ENCFF784ZJQ bigWig signal p-value ENCSR618GDK ChIP-seq EFO:0002067 K562 cell line Homo sapiens CEBPZ-human ENCAB000ADO DNA False 2014-07-07 ENCODE 1, 4 ENCFF335IPE, ENCFF707DVP, ENCFF729TUK, ENCFF879OQC 974336615 ENCODE Processing Pipeline 9c8d50acc10a29a4e1e5e0db3d113d37 https://www.encodeproject.org/files/ENCFF784ZJQ/@@download/ENCFF784ZJQ.bigWig hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length ENCFF324NIB bigWig fold change over control ENCSR618GDK ChIP-seq EFO:0002067 K562 cell line Homo sapiens CEBPZ-human ENCAB000ADO DNA False 2014-07-07 ENCODE 1, 4 ENCFF335IPE, ENCFF707DVP, ENCFF729TUK, ENCFF879OQC 948624567 ENCODE Processing Pipeline 77055938af1c7e34ec9b37648fccd487 https://www.encodeproject.org/files/ENCFF324NIB/@@download/ENCFF324NIB.bigWig hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length ENCFF830WTR bed narrowPeak peaks ENCSR618GDK ChIP-seq EFO:0002067 K562 cell line Homo sapiens CEBPZ-human ENCAB000ADO DNA False 2014-07-07 ENCODE 4 ENCFF729TUK, ENCFF879OQC 4750603 ENCODE Processing Pipeline da1adcf7c8e65b129d23f74d360c650a https://www.encodeproject.org/files/ENCFF830WTR/@@download/ENCFF830WTR.bed.gz hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length ENCFF355FJN bed narrowPeak peaks ENCSR618GDK ChIP-seq EFO:0002067 K562 cell line Homo sapiens CEBPZ-human ENCAB000ADO DNA False 2014-07-07 ENCODE 1 ENCFF335IPE, ENCFF707DVP 4271462 ENCODE Processing Pipeline dca743565f99bebc0a1da12f168a6062 https://www.encodeproject.org/files/ENCFF355FJN/@@download/ENCFF355FJN.bed.gz hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length ENCFF560NMX bigBed narrowPeak peaks ENCSR618GDK ChIP-seq EFO:0002067 K562 cell line Homo sapiens CEBPZ-human ENCAB000ADO DNA False 2014-07-07 ENCODE 1 ENCFF355FJN 10643754 ENCODE Processing Pipeline df22f3045904f902e503dc089a303208 https://www.encodeproject.org/files/ENCFF560NMX/@@download/ENCFF560NMX.bigBed hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length ENCFF895ZCE bed narrowPeak peaks ENCSR618GDK ChIP-seq EFO:0002067 K562 cell line Homo sapiens CEBPZ-human ENCAB000ADO DNA False 2014-07-07 ENCODE 1, 4 ENCFF335IPE, ENCFF707DVP, ENCFF729TUK, ENCFF879OQC 5962018 ENCODE Processing Pipeline 93baf08902be699318abb079c986deac https://www.encodeproject.org/files/ENCFF895ZCE/@@download/ENCFF895ZCE.bed.gz hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length ENCFF119ASS bigBed narrowPeak peaks ENCSR618GDK ChIP-seq EFO:0002067 K562 cell line Homo sapiens CEBPZ-human ENCAB000ADO DNA False 2014-07-07 ENCODE 4 ENCFF830WTR 10941614 ENCODE Processing Pipeline 9b0fc1abfc2dfcaa906110760efd54ee https://www.encodeproject.org/files/ENCFF119ASS/@@download/ENCFF119ASS.bigBed hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length ENCFF866AYD bigBed narrowPeak peaks ENCSR618GDK ChIP-seq EFO:0002067 K562 cell line Homo sapiens CEBPZ-human ENCAB000ADO DNA False 2014-07-07 ENCODE 1, 4 ENCFF895ZCE 11288710 ENCODE Processing Pipeline 4044425dd19e5fb7381a181b7870630e https://www.encodeproject.org/files/ENCFF866AYD/@@download/ENCFF866AYD.bigBed hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length ENCFF925MHB bed narrowPeak optimal idr thresholded peaks ENCSR618GDK ChIP-seq EFO:0002067 K562 cell line Homo sapiens CEBPZ-human ENCAB000ADO DNA False 2014-07-07 ENCODE 1, 4 ENCFF001TDO, ENCFF355FJN, ENCFF830WTR, ENCFF895ZCE 24634 ENCODE Processing Pipeline 883e9c0b1e68c25bad97a58920ac3f58 https://www.encodeproject.org/files/ENCFF925MHB/@@download/ENCFF925MHB.bed.gz hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length ENCFF803JOE bed narrowPeak conservative idr thresholded peaks ENCSR618GDK ChIP-seq EFO:0002067 K562 cell line Homo sapiens CEBPZ-human ENCAB000ADO DNA False 2014-07-07 ENCODE 1, 4 ENCFF001TDO, ENCFF355FJN, ENCFF830WTR, ENCFF895ZCE 16238 ENCODE Processing Pipeline 8cb60e5e44b5ae74ee8438a9aed9f48c https://www.encodeproject.org/files/ENCFF803JOE/@@download/ENCFF803JOE.bed.gz hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length ENCFF609DVV bigBed narrowPeak conservative idr thresholded peaks ENCSR618GDK ChIP-seq EFO:0002067 K562 cell line Homo sapiens CEBPZ-human ENCAB000ADO DNA False 2014-07-07 ENCODE 1, 4 ENCFF803JOE 82947 ENCODE Processing Pipeline d5fb0c175930d3aeb6b7ea5424ea114c https://www.encodeproject.org/files/ENCFF609DVV/@@download/ENCFF609DVV.bigBed hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length ENCFF108IIU bigBed narrowPeak optimal idr thresholded peaks ENCSR618GDK ChIP-seq EFO:0002067 K562 cell line Homo sapiens CEBPZ-human ENCAB000ADO DNA False 2014-07-07 ENCODE 1, 4 ENCFF925MHB 97525 ENCODE Processing Pipeline 522b7a785ec74808ab5eb46dce53d64f https://www.encodeproject.org/files/ENCFF108IIU/@@download/ENCFF108IIU.bigBed hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length ENCFF002EEE fastq reads ENCSR618GDK ChIP-seq EFO:0002067 K562 cell line Homo sapiens CEBPZ-human ENCAB000ADO DNA False 2014-07-07 ENCODE 1 1 36 single-ended 827022291 Michael Snyder, Stanford ac9fc6435c00094b45f117e17abbbc58 SRA:SRR5111851 https://www.encodeproject.org/files/ENCFF002EEE/@@download/ENCFF002EEE.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF002ECW/ released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length ENCFF002EEI fastq reads ENCSR618GDK ChIP-seq EFO:0002067 K562 cell line Homo sapiens CEBPZ-human ENCAB000ADO DNA False 2014-07-07 ENCODE 4 1 36 single-ended 983521158 Michael Snyder, Stanford 33c44d14baeb7e7fd3d03abfa5079a23 SRA:SRR5111852 https://www.encodeproject.org/files/ENCFF002EEI/@@download/ENCFF002EEI.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF002ECS/ released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length ENCFF707DVP bam alignments ENCSR618GDK ChIP-seq EFO:0002067 K562 cell line Homo sapiens CEBPZ-human ENCAB000ADO DNA False 2014-07-07 ENCODE 1 36 ENCFF002EEE, ENCFF807MUK 681503456 ENCODE Processing Pipeline 282af5c3477638886bacfcc0166486ae https://www.encodeproject.org/files/ENCFF707DVP/@@download/ENCFF707DVP.bam hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length ENCFF729TUK bam alignments ENCSR618GDK ChIP-seq EFO:0002067 K562 cell line Homo sapiens CEBPZ-human ENCAB000ADO DNA False 2014-07-07 ENCODE 4 36 ENCFF002EEI, ENCFF807MUK 769830242 ENCODE Processing Pipeline 1380c0428e1571342261d1a1af5bf14a https://www.encodeproject.org/files/ENCFF729TUK/@@download/ENCFF729TUK.bam hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length ENCFF843MLM bigWig signal p-value ENCSR618GDK ChIP-seq EFO:0002067 K562 cell line Homo sapiens CEBPZ-human ENCAB000ADO DNA False 2014-07-07 ENCODE 1, 4 ENCFF335IPE, ENCFF707DVP, ENCFF729TUK, ENCFF879OQC 969099198 ENCODE Processing Pipeline de359bbe5f39dc3841572a9a2c8276ab https://www.encodeproject.org/files/ENCFF843MLM/@@download/ENCFF843MLM.bigWig hg19 archived borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length ENCFF760MMN bigBed narrowPeak peaks ENCSR618GDK ChIP-seq EFO:0002067 K562 cell line Homo sapiens CEBPZ-human ENCAB000ADO DNA False 2014-07-07 ENCODE 1, 4 ENCFF671UIB 11306740 ENCODE Processing Pipeline c927aee9dda33440c62eb4643feae805 https://www.encodeproject.org/files/ENCFF760MMN/@@download/ENCFF760MMN.bigBed hg19 archived borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length ENCFF138IOK bigWig signal p-value ENCSR618GDK ChIP-seq EFO:0002067 K562 cell line Homo sapiens CEBPZ-human ENCAB000ADO DNA False 2014-07-07 ENCODE 1 ENCFF335IPE, ENCFF707DVP 502680441 ENCODE Processing Pipeline 2f0155afc0c23f882eb6625322867421 https://www.encodeproject.org/files/ENCFF138IOK/@@download/ENCFF138IOK.bigWig hg19 archived borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length ENCFF893YZB bigWig fold change over control ENCSR618GDK ChIP-seq EFO:0002067 K562 cell line Homo sapiens CEBPZ-human ENCAB000ADO DNA False 2014-07-07 ENCODE 1, 4 ENCFF335IPE, ENCFF707DVP, ENCFF729TUK, ENCFF879OQC 937796395 ENCODE Processing Pipeline 2be218c1781408c42c023932242b575c https://www.encodeproject.org/files/ENCFF893YZB/@@download/ENCFF893YZB.bigWig hg19 archived borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length ENCFF835EFY bigWig fold change over control ENCSR618GDK ChIP-seq EFO:0002067 K562 cell line Homo sapiens CEBPZ-human ENCAB000ADO DNA False 2014-07-07 ENCODE 4 ENCFF729TUK, ENCFF879OQC 447939293 ENCODE Processing Pipeline effc4efad896dd4597bdd3d2d4ba9fdc https://www.encodeproject.org/files/ENCFF835EFY/@@download/ENCFF835EFY.bigWig hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length ENCFF733QCO bigWig fold change over control ENCSR618GDK ChIP-seq EFO:0002067 K562 cell line Homo sapiens CEBPZ-human ENCAB000ADO DNA False 2014-07-07 ENCODE 1 ENCFF335IPE, ENCFF707DVP 393908005 ENCODE Processing Pipeline c5436961a8df215e18f37315216b8422 https://www.encodeproject.org/files/ENCFF733QCO/@@download/ENCFF733QCO.bigWig hg19 archived borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length ENCFF196NEV bed narrowPeak peaks ENCSR618GDK ChIP-seq EFO:0002067 K562 cell line Homo sapiens CEBPZ-human ENCAB000ADO DNA False 2014-07-07 ENCODE 4 ENCFF729TUK, ENCFF879OQC 4963186 ENCODE Processing Pipeline bc72f3c31d4c4930de1d951cb69f3c28 https://www.encodeproject.org/files/ENCFF196NEV/@@download/ENCFF196NEV.bed.gz hg19 archived borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length ENCFF126VUI bigWig signal p-value ENCSR618GDK ChIP-seq EFO:0002067 K562 cell line Homo sapiens CEBPZ-human ENCAB000ADO DNA False 2014-07-07 ENCODE 4 ENCFF729TUK, ENCFF879OQC 515434639 ENCODE Processing Pipeline 53337b0bd7cd8fb6de22d4d1550b8405 https://www.encodeproject.org/files/ENCFF126VUI/@@download/ENCFF126VUI.bigWig hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length ENCFF896GVG bigBed narrowPeak peaks ENCSR618GDK ChIP-seq EFO:0002067 K562 cell line Homo sapiens CEBPZ-human ENCAB000ADO DNA False 2014-07-07 ENCODE 4 ENCFF196NEV 11096441 ENCODE Processing Pipeline d74a38fe10a7cca1281b2c06ecc5b78e https://www.encodeproject.org/files/ENCFF896GVG/@@download/ENCFF896GVG.bigBed hg19 archived borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length ENCFF603ABN bed narrowPeak peaks ENCSR618GDK ChIP-seq EFO:0002067 K562 cell line Homo sapiens CEBPZ-human ENCAB000ADO DNA False 2014-07-07 ENCODE 1 ENCFF335IPE, ENCFF707DVP 4472627 ENCODE Processing Pipeline 81881c2eb3c994ca231224ff2b71f64a https://www.encodeproject.org/files/ENCFF603ABN/@@download/ENCFF603ABN.bed.gz hg19 archived borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length ENCFF518NJZ bigBed narrowPeak peaks ENCSR618GDK ChIP-seq EFO:0002067 K562 cell line Homo sapiens CEBPZ-human ENCAB000ADO DNA False 2014-07-07 ENCODE 1 ENCFF603ABN 10857027 ENCODE Processing Pipeline bf2be4c03184a135cd746280d1043f5a https://www.encodeproject.org/files/ENCFF518NJZ/@@download/ENCFF518NJZ.bigBed hg19 archived borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length ENCFF671UIB bed narrowPeak peaks ENCSR618GDK ChIP-seq EFO:0002067 K562 cell line Homo sapiens CEBPZ-human ENCAB000ADO DNA False 2014-07-07 ENCODE 1, 4 ENCFF335IPE, ENCFF707DVP, ENCFF729TUK, ENCFF879OQC 6136465 ENCODE Processing Pipeline 35579a6a058ce6955e06f44bea582a10 https://www.encodeproject.org/files/ENCFF671UIB/@@download/ENCFF671UIB.bed.gz hg19 archived borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length ENCFF588IRF bam unfiltered alignments ENCSR618GDK ChIP-seq EFO:0002067 K562 cell line Homo sapiens CEBPZ-human ENCAB000ADO DNA False 2014-07-07 ENCODE 4 36 ENCFF002EEI, ENCFF643CGH 1195391794 ENCODE Processing Pipeline c55aa0c514f64d81e05e2b4a82eac36c https://www.encodeproject.org/files/ENCFF588IRF/@@download/ENCFF588IRF.bam GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length ENCFF351YEW bam unfiltered alignments ENCSR618GDK ChIP-seq EFO:0002067 K562 cell line Homo sapiens CEBPZ-human ENCAB000ADO DNA False 2014-07-07 ENCODE 1 36 ENCFF002EEE, ENCFF643CGH 1020235978 ENCODE Processing Pipeline 8defd81ea88900880ab289bc4cb2613d https://www.encodeproject.org/files/ENCFF351YEW/@@download/ENCFF351YEW.bam GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length ENCFF799RPS bam alignments ENCSR618GDK ChIP-seq EFO:0002067 K562 cell line Homo sapiens CEBPZ-human ENCAB000ADO DNA False 2014-07-07 ENCODE 4 36 ENCFF002EEI, ENCFF643CGH 769223121 ENCODE Processing Pipeline e22e5d3c53a9dfd5c41df292d8ed835a https://www.encodeproject.org/files/ENCFF799RPS/@@download/ENCFF799RPS.bam GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length ENCFF576EDK bam alignments ENCSR618GDK ChIP-seq EFO:0002067 K562 cell line Homo sapiens CEBPZ-human ENCAB000ADO DNA False 2014-07-07 ENCODE 1 36 ENCFF002EEE, ENCFF643CGH 681034922 ENCODE Processing Pipeline a7a96e2afa6873e71aa7c8ce480204e3 https://www.encodeproject.org/files/ENCFF576EDK/@@download/ENCFF576EDK.bam GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length ENCFF897VWO bigWig signal p-value ENCSR618GDK ChIP-seq EFO:0002067 K562 cell line Homo sapiens CEBPZ-human ENCAB000ADO DNA False 2014-07-07 ENCODE 1 ENCFF156FED, ENCFF576EDK 575978256 ENCODE Processing Pipeline 8acc4a09ca480abe995176bb8a2e2777 https://www.encodeproject.org/files/ENCFF897VWO/@@download/ENCFF897VWO.bigWig GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length ENCFF512BRW bigWig signal p-value ENCSR618GDK ChIP-seq EFO:0002067 K562 cell line Homo sapiens CEBPZ-human ENCAB000ADO DNA False 2014-07-07 ENCODE 4 ENCFF577FNG, ENCFF799RPS 510296578 ENCODE Processing Pipeline 4c576002b30592ab9525b5dc0ca2497e https://www.encodeproject.org/files/ENCFF512BRW/@@download/ENCFF512BRW.bigWig GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length ENCFF380XVH bigWig signal p-value ENCSR618GDK ChIP-seq EFO:0002067 K562 cell line Homo sapiens CEBPZ-human ENCAB000ADO DNA False 2014-07-07 ENCODE 1, 4 ENCFF156FED, ENCFF576EDK, ENCFF577FNG, ENCFF799RPS 1077702489 ENCODE Processing Pipeline d383b47286d9c712740e2e6d21332dda https://www.encodeproject.org/files/ENCFF380XVH/@@download/ENCFF380XVH.bigWig GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length ENCFF234DNB bigWig fold change over control ENCSR618GDK ChIP-seq EFO:0002067 K562 cell line Homo sapiens CEBPZ-human ENCAB000ADO DNA False 2014-07-07 ENCODE 1 ENCFF156FED, ENCFF576EDK 387423870 ENCODE Processing Pipeline 9459d34548968e66b7c45d119ab07510 https://www.encodeproject.org/files/ENCFF234DNB/@@download/ENCFF234DNB.bigWig GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length ENCFF508MWG bigWig fold change over control ENCSR618GDK ChIP-seq EFO:0002067 K562 cell line Homo sapiens CEBPZ-human ENCAB000ADO DNA False 2014-07-07 ENCODE 4 ENCFF577FNG, ENCFF799RPS 450752025 ENCODE Processing Pipeline 61e5485f46a1cddec770376983cd3b82 https://www.encodeproject.org/files/ENCFF508MWG/@@download/ENCFF508MWG.bigWig GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length ENCFF387BYC bigWig fold change over control ENCSR618GDK ChIP-seq EFO:0002067 K562 cell line Homo sapiens CEBPZ-human ENCAB000ADO DNA False 2014-07-07 ENCODE 1, 4 ENCFF156FED, ENCFF576EDK, ENCFF577FNG, ENCFF799RPS 937064211 ENCODE Processing Pipeline 029d611c8e8c23cc10cde59dab0d62c6 https://www.encodeproject.org/files/ENCFF387BYC/@@download/ENCFF387BYC.bigWig GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length ENCFF183SEC bed narrowPeak peaks ENCSR618GDK ChIP-seq EFO:0002067 K562 cell line Homo sapiens CEBPZ-human ENCAB000ADO DNA False 2014-07-07 ENCODE 1 ENCFF156FED, ENCFF576EDK 4267076 ENCODE Processing Pipeline 0a40a4133c1a9c2aae902a2c88388f6b https://www.encodeproject.org/files/ENCFF183SEC/@@download/ENCFF183SEC.bed.gz GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length ENCFF120AAX bed narrowPeak peaks ENCSR618GDK ChIP-seq EFO:0002067 K562 cell line Homo sapiens CEBPZ-human ENCAB000ADO DNA False 2014-07-07 ENCODE 4 ENCFF577FNG, ENCFF799RPS 4686761 ENCODE Processing Pipeline d6992f62b5549aee9691233e824010d2 https://www.encodeproject.org/files/ENCFF120AAX/@@download/ENCFF120AAX.bed.gz GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length ENCFF653TOA bigBed narrowPeak peaks ENCSR618GDK ChIP-seq EFO:0002067 K562 cell line Homo sapiens CEBPZ-human ENCAB000ADO DNA False 2014-07-07 ENCODE 1 ENCFF183SEC 10645919 ENCODE Processing Pipeline ce149692d840d0293f90f8ce3ae9c4c9 https://www.encodeproject.org/files/ENCFF653TOA/@@download/ENCFF653TOA.bigBed GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length ENCFF443GTS bigBed narrowPeak peaks ENCSR618GDK ChIP-seq EFO:0002067 K562 cell line Homo sapiens CEBPZ-human ENCAB000ADO DNA False 2014-07-07 ENCODE 4 ENCFF120AAX 10970844 ENCODE Processing Pipeline 02f8c826ad2b95eda4f6024878643179 https://www.encodeproject.org/files/ENCFF443GTS/@@download/ENCFF443GTS.bigBed GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length ENCFF440WDS bigBed narrowPeak peaks ENCSR618GDK ChIP-seq EFO:0002067 K562 cell line Homo sapiens CEBPZ-human ENCAB000ADO DNA False 2014-07-07 ENCODE 1, 4 ENCFF274WAV 11321997 ENCODE Processing Pipeline 74826e3454b62078c2efdfa539e2c5df https://www.encodeproject.org/files/ENCFF440WDS/@@download/ENCFF440WDS.bigBed GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length ENCFF179GMV bed narrowPeak conservative idr thresholded peaks ENCSR618GDK ChIP-seq EFO:0002067 K562 cell line Homo sapiens CEBPZ-human ENCAB000ADO DNA False 2014-07-07 ENCODE 1, 4 ENCFF120AAX, ENCFF183SEC, ENCFF274WAV, ENCFF419RSJ 17075 ENCODE Processing Pipeline becb48a377e025017d3900afa248223f https://www.encodeproject.org/files/ENCFF179GMV/@@download/ENCFF179GMV.bed.gz GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length ENCFF274WAV bed narrowPeak peaks ENCSR618GDK ChIP-seq EFO:0002067 K562 cell line Homo sapiens CEBPZ-human ENCAB000ADO DNA False 2014-07-07 ENCODE 1, 4 ENCFF156FED, ENCFF576EDK, ENCFF577FNG, ENCFF799RPS 5919282 ENCODE Processing Pipeline 2a04fe2ed814b375771089eae8ec3d08 https://www.encodeproject.org/files/ENCFF274WAV/@@download/ENCFF274WAV.bed.gz GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length ENCFF632LHS bigBed narrowPeak conservative idr thresholded peaks ENCSR618GDK ChIP-seq EFO:0002067 K562 cell line Homo sapiens CEBPZ-human ENCAB000ADO DNA False 2014-07-07 ENCODE 1, 4 ENCFF179GMV 84580 ENCODE Processing Pipeline 0eaa7dd68c5393776efe2d73fae9dfc2 https://www.encodeproject.org/files/ENCFF632LHS/@@download/ENCFF632LHS.bigBed GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length ENCFF797OWK bed narrowPeak optimal idr thresholded peaks ENCSR618GDK ChIP-seq EFO:0002067 K562 cell line Homo sapiens CEBPZ-human ENCAB000ADO DNA False 2014-07-07 ENCODE 1, 4 ENCFF120AAX, ENCFF183SEC, ENCFF274WAV, ENCFF419RSJ 25073 ENCODE Processing Pipeline 84185a6b0f28628215c2fd54a269237b https://www.encodeproject.org/files/ENCFF797OWK/@@download/ENCFF797OWK.bed.gz GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length ENCFF397KMG bigBed narrowPeak optimal idr thresholded peaks ENCSR618GDK ChIP-seq EFO:0002067 K562 cell line Homo sapiens CEBPZ-human ENCAB000ADO DNA False 2014-07-07 ENCODE 1, 4 ENCFF797OWK 98552 ENCODE Processing Pipeline c3f20d540d0a9bab349dc602a6063154 https://www.encodeproject.org/files/ENCFF397KMG/@@download/ENCFF397KMG.bigBed GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length ENCFF392TKK bed narrowPeak optimal idr thresholded peaks ENCSR618GDK ChIP-seq EFO:0002067 K562 cell line Homo sapiens CEBPZ-human ENCAB000ADO DNA False 2014-07-07 ENCODE 1, 4 ENCFF001TDO, ENCFF196NEV, ENCFF603ABN, ENCFF671UIB 21050 ENCODE Processing Pipeline c3bda9e03d77f48fd2712a1af5c26a09 https://www.encodeproject.org/files/ENCFF392TKK/@@download/ENCFF392TKK.bed.gz hg19 archived borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length ENCFF054RBS bed narrowPeak conservative idr thresholded peaks ENCSR618GDK ChIP-seq EFO:0002067 K562 cell line Homo sapiens CEBPZ-human ENCAB000ADO DNA False 2014-07-07 ENCODE 1, 4 ENCFF001TDO, ENCFF196NEV, ENCFF603ABN, ENCFF671UIB 14326 ENCODE Processing Pipeline 2b767586df97e0ca28fcea7ab899d400 https://www.encodeproject.org/files/ENCFF054RBS/@@download/ENCFF054RBS.bed.gz hg19 archived borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length ENCFF518ZHA bigBed narrowPeak conservative idr thresholded peaks ENCSR618GDK ChIP-seq EFO:0002067 K562 cell line Homo sapiens CEBPZ-human ENCAB000ADO DNA False 2014-07-07 ENCODE 1, 4 ENCFF054RBS 66965 ENCODE Processing Pipeline 5f4ce1bcc88610db06e3a52c2f0e2909 https://www.encodeproject.org/files/ENCFF518ZHA/@@download/ENCFF518ZHA.bigBed hg19 archived borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length ENCFF821WVM bigBed narrowPeak optimal idr thresholded peaks ENCSR618GDK ChIP-seq EFO:0002067 K562 cell line Homo sapiens CEBPZ-human ENCAB000ADO DNA False 2014-07-07 ENCODE 1, 4 ENCFF392TKK 76241 ENCODE Processing Pipeline 712087e850710575774b5a5eefec8048 https://www.encodeproject.org/files/ENCFF821WVM/@@download/ENCFF821WVM.bigBed hg19 archived borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length ENCFF672NIZ fastq reads ENCSR924GXX ChIP-seq EFO:0002067 K562 cell line Homo sapiens PHB2-human ENCAB081KLG DNA False 2017-01-27 ENCODE 2 1 100 paired-ended 1 ENCFF513NXC 2314860984 Michael Snyder, Stanford 57c80bcb76281fed346d72676e10ccfa SRA:SRR6214001 https://www.encodeproject.org/files/ENCFF672NIZ/@@download/ENCFF672NIZ.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFD/ released low read depth ENCFF513NXC fastq reads ENCSR924GXX ChIP-seq EFO:0002067 K562 cell line Homo sapiens PHB2-human ENCAB081KLG DNA False 2017-01-27 ENCODE 2 1 100 paired-ended 2 ENCFF672NIZ 2399791595 Michael Snyder, Stanford d25ef761c88bb5a423e94cdb30eef956 SRA:SRR6214001 https://www.encodeproject.org/files/ENCFF513NXC/@@download/ENCFF513NXC.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFA/ released low read depth ENCFF499ADG fastq reads ENCSR924GXX ChIP-seq EFO:0002067 K562 cell line Homo sapiens PHB2-human ENCAB081KLG DNA False 2017-01-27 ENCODE 1 1 100 paired-ended 1 ENCFF005PFF 2743712592 Michael Snyder, Stanford aedda9fcc8dc605181e4c107f23156bc SRA:SRR6214002 https://www.encodeproject.org/files/ENCFF499ADG/@@download/ENCFF499ADG.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFF/ released low read depth ENCFF005PFF fastq reads ENCSR924GXX ChIP-seq EFO:0002067 K562 cell line Homo sapiens PHB2-human ENCAB081KLG DNA False 2017-01-27 ENCODE 1 1 100 paired-ended 2 ENCFF499ADG 2812837110 Michael Snyder, Stanford 52a0ad66cd97f4e18ab13c566521b417 SRA:SRR6214002 https://www.encodeproject.org/files/ENCFF005PFF/@@download/ENCFF005PFF.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFH/ released low read depth ENCFF591WCM bam unfiltered alignments ENCSR924GXX ChIP-seq EFO:0002067 K562 cell line Homo sapiens PHB2-human ENCAB081KLG DNA False 2017-01-27 ENCODE 2 100 ENCFF513NXC, ENCFF672NIZ, ENCFF807MUK 5119161561 ENCODE Processing Pipeline aeae5c5c08a89b640d2ddc1b9bc4d862 https://www.encodeproject.org/files/ENCFF591WCM/@@download/ENCFF591WCM.bam hg19 released low read depth ENCFF383RGH bam unfiltered alignments ENCSR924GXX ChIP-seq EFO:0002067 K562 cell line Homo sapiens PHB2-human ENCAB081KLG DNA False 2017-01-27 ENCODE 2 100 ENCFF513NXC, ENCFF643CGH, ENCFF672NIZ 5120638639 ENCODE Processing Pipeline defcd79acd1be6091f844f1897dc31f1 https://www.encodeproject.org/files/ENCFF383RGH/@@download/ENCFF383RGH.bam GRCh38 released low read depth ENCFF828ZBV bam unfiltered alignments ENCSR924GXX ChIP-seq EFO:0002067 K562 cell line Homo sapiens PHB2-human ENCAB081KLG DNA False 2017-01-27 ENCODE 1 100 ENCFF005PFF, ENCFF499ADG, ENCFF643CGH 6064308130 ENCODE Processing Pipeline 7fa5cc9e9d71ef835992c1411ec4f1e4 https://www.encodeproject.org/files/ENCFF828ZBV/@@download/ENCFF828ZBV.bam GRCh38 released low read depth ENCFF640KEQ bam unfiltered alignments ENCSR924GXX ChIP-seq EFO:0002067 K562 cell line Homo sapiens PHB2-human ENCAB081KLG DNA False 2017-01-27 ENCODE 1 100 ENCFF005PFF, ENCFF499ADG, ENCFF807MUK 6060451398 ENCODE Processing Pipeline 473307604dbf7c50330d73ad2d904031 https://www.encodeproject.org/files/ENCFF640KEQ/@@download/ENCFF640KEQ.bam hg19 released low read depth ENCFF229VMU bam alignments ENCSR924GXX ChIP-seq EFO:0002067 K562 cell line Homo sapiens PHB2-human ENCAB081KLG DNA False 2017-01-27 ENCODE 1 100 ENCFF005PFF, ENCFF499ADG, ENCFF643CGH 4744141691 ENCODE Processing Pipeline 9acc50e697b2451285f72e63758232c7 https://www.encodeproject.org/files/ENCFF229VMU/@@download/ENCFF229VMU.bam GRCh38 released low read depth ENCFF134HTY bam alignments ENCSR924GXX ChIP-seq EFO:0002067 K562 cell line Homo sapiens PHB2-human ENCAB081KLG DNA False 2017-01-27 ENCODE 2 100 ENCFF513NXC, ENCFF672NIZ, ENCFF807MUK 3706560681 ENCODE Processing Pipeline 5f051d201019b9932c94b120dbba4d75 https://www.encodeproject.org/files/ENCFF134HTY/@@download/ENCFF134HTY.bam hg19 released low read depth ENCFF802CIM bam alignments ENCSR924GXX ChIP-seq EFO:0002067 K562 cell line Homo sapiens PHB2-human ENCAB081KLG DNA False 2017-01-27 ENCODE 2 100 ENCFF513NXC, ENCFF643CGH, ENCFF672NIZ 3709998175 ENCODE Processing Pipeline a2b95e968a163c517143752817db5f75 https://www.encodeproject.org/files/ENCFF802CIM/@@download/ENCFF802CIM.bam GRCh38 released low read depth ENCFF518TII bam alignments ENCSR924GXX ChIP-seq EFO:0002067 K562 cell line Homo sapiens PHB2-human ENCAB081KLG DNA False 2017-01-27 ENCODE 1 100 ENCFF005PFF, ENCFF499ADG, ENCFF807MUK 4740574128 ENCODE Processing Pipeline f882fef081b87eb3baf64940ce105b95 https://www.encodeproject.org/files/ENCFF518TII/@@download/ENCFF518TII.bam hg19 released low read depth ENCFF804DGH bigWig signal p-value ENCSR924GXX ChIP-seq EFO:0002067 K562 cell line Homo sapiens PHB2-human ENCAB081KLG DNA False 2017-01-27 ENCODE 1 ENCFF518TII, ENCFF581ZJL 1216200582 ENCODE Processing Pipeline 3f764014f507af05f408e554fa679c61 https://www.encodeproject.org/files/ENCFF804DGH/@@download/ENCFF804DGH.bigWig hg19 released low read depth ENCFF339BHB bigWig signal p-value ENCSR924GXX ChIP-seq EFO:0002067 K562 cell line Homo sapiens PHB2-human ENCAB081KLG DNA False 2017-01-27 ENCODE 2 ENCFF051LWI, ENCFF134HTY 1098052161 ENCODE Processing Pipeline 140041942090fec42bc0a2372804688d https://www.encodeproject.org/files/ENCFF339BHB/@@download/ENCFF339BHB.bigWig hg19 released low read depth ENCFF774DDH bigWig signal p-value ENCSR924GXX ChIP-seq EFO:0002067 K562 cell line Homo sapiens PHB2-human ENCAB081KLG DNA False 2017-01-27 ENCODE 1, 2 ENCFF051LWI, ENCFF134HTY, ENCFF518TII, ENCFF581ZJL 1963013717 ENCODE Processing Pipeline 4e46109b71e6aea499b51ad7cd515470 https://www.encodeproject.org/files/ENCFF774DDH/@@download/ENCFF774DDH.bigWig hg19 released low read depth ENCFF989IJR bigWig fold change over control ENCSR924GXX ChIP-seq EFO:0002067 K562 cell line Homo sapiens PHB2-human ENCAB081KLG DNA False 2017-01-27 ENCODE 1 ENCFF518TII, ENCFF581ZJL 1228064271 ENCODE Processing Pipeline a93c0557bbe7c15578805faea73d27d3 https://www.encodeproject.org/files/ENCFF989IJR/@@download/ENCFF989IJR.bigWig hg19 released low read depth ENCFF265BZV bigWig fold change over control ENCSR924GXX ChIP-seq EFO:0002067 K562 cell line Homo sapiens PHB2-human ENCAB081KLG DNA False 2017-01-27 ENCODE 2 ENCFF051LWI, ENCFF134HTY 991188031 ENCODE Processing Pipeline 1e834ba61ced4b3469ba5ade76fe80a9 https://www.encodeproject.org/files/ENCFF265BZV/@@download/ENCFF265BZV.bigWig hg19 released low read depth ENCFF508MDN bed narrowPeak peaks ENCSR924GXX ChIP-seq EFO:0002067 K562 cell line Homo sapiens PHB2-human ENCAB081KLG DNA False 2017-01-27 ENCODE 1 ENCFF518TII, ENCFF581ZJL 6690900 ENCODE Processing Pipeline 04bd69cb516b2ca5310ee105263c240d https://www.encodeproject.org/files/ENCFF508MDN/@@download/ENCFF508MDN.bed.gz hg19 released low read depth ENCFF044DKD bigBed narrowPeak peaks ENCSR924GXX ChIP-seq EFO:0002067 K562 cell line Homo sapiens PHB2-human ENCAB081KLG DNA False 2017-01-27 ENCODE 1 ENCFF508MDN 13229236 ENCODE Processing Pipeline 02df47f0a73237d150e8a5f1c2590d7d https://www.encodeproject.org/files/ENCFF044DKD/@@download/ENCFF044DKD.bigBed hg19 released low read depth ENCFF505XYY bed narrowPeak conservative idr thresholded peaks ENCSR924GXX ChIP-seq EFO:0002067 K562 cell line Homo sapiens PHB2-human ENCAB081KLG DNA False 2017-01-27 ENCODE 1, 2 ENCFF001TDO, ENCFF231LOJ, ENCFF370RBU, ENCFF508MDN 90306 ENCODE Processing Pipeline ba8c797d9cd4eb7d4d8f76fe9d65c0ae https://www.encodeproject.org/files/ENCFF505XYY/@@download/ENCFF505XYY.bed.gz hg19 released low read depth ENCFF231LOJ bed narrowPeak peaks ENCSR924GXX ChIP-seq EFO:0002067 K562 cell line Homo sapiens PHB2-human ENCAB081KLG DNA False 2017-01-27 ENCODE 1, 2 ENCFF051LWI, ENCFF134HTY, ENCFF518TII, ENCFF581ZJL 7221782 ENCODE Processing Pipeline 7ae8cbc53fa189cbfe53de27f75f9909 https://www.encodeproject.org/files/ENCFF231LOJ/@@download/ENCFF231LOJ.bed.gz hg19 released low read depth ENCFF277SXW bigBed narrowPeak peaks ENCSR924GXX ChIP-seq EFO:0002067 K562 cell line Homo sapiens PHB2-human ENCAB081KLG DNA False 2017-01-27 ENCODE 1, 2 ENCFF231LOJ 13114422 ENCODE Processing Pipeline 98b083af30931cc4794b0f1f650e47cc https://www.encodeproject.org/files/ENCFF277SXW/@@download/ENCFF277SXW.bigBed hg19 released low read depth ENCFF462FRU bed narrowPeak optimal idr thresholded peaks ENCSR924GXX ChIP-seq EFO:0002067 K562 cell line Homo sapiens PHB2-human ENCAB081KLG DNA False 2017-01-27 ENCODE 1, 2 ENCFF001TDO, ENCFF231LOJ, ENCFF370RBU, ENCFF508MDN 140167 ENCODE Processing Pipeline 1426f48c300e84e812d6c2bc81cb4162 https://www.encodeproject.org/files/ENCFF462FRU/@@download/ENCFF462FRU.bed.gz hg19 released low read depth ENCFF149FPK bigBed narrowPeak optimal idr thresholded peaks ENCSR924GXX ChIP-seq EFO:0002067 K562 cell line Homo sapiens PHB2-human ENCAB081KLG DNA False 2017-01-27 ENCODE 1, 2 ENCFF462FRU 309946 ENCODE Processing Pipeline d224c44356394f2c12b52643de2ee2fd https://www.encodeproject.org/files/ENCFF149FPK/@@download/ENCFF149FPK.bigBed hg19 released low read depth ENCFF776ZKG bigWig fold change over control ENCSR924GXX ChIP-seq EFO:0002067 K562 cell line Homo sapiens PHB2-human ENCAB081KLG DNA False 2017-01-27 ENCODE 1, 2 ENCFF051LWI, ENCFF134HTY, ENCFF518TII, ENCFF581ZJL 2060028257 ENCODE Processing Pipeline a4efc591e066ec320ff57486f612459a https://www.encodeproject.org/files/ENCFF776ZKG/@@download/ENCFF776ZKG.bigWig hg19 released low read depth ENCFF370RBU bed narrowPeak peaks ENCSR924GXX ChIP-seq EFO:0002067 K562 cell line Homo sapiens PHB2-human ENCAB081KLG DNA False 2017-01-27 ENCODE 2 ENCFF051LWI, ENCFF134HTY 6668633 ENCODE Processing Pipeline 508447dc5f2ece5fee0b0816bac0d5c7 https://www.encodeproject.org/files/ENCFF370RBU/@@download/ENCFF370RBU.bed.gz hg19 released low read depth ENCFF418ORJ bigBed narrowPeak peaks ENCSR924GXX ChIP-seq EFO:0002067 K562 cell line Homo sapiens PHB2-human ENCAB081KLG DNA False 2017-01-27 ENCODE 2 ENCFF370RBU 13239043 ENCODE Processing Pipeline f145f1e867b2211b93a32712e45bd52d https://www.encodeproject.org/files/ENCFF418ORJ/@@download/ENCFF418ORJ.bigBed hg19 released low read depth ENCFF470LCU bigBed narrowPeak conservative idr thresholded peaks ENCSR924GXX ChIP-seq EFO:0002067 K562 cell line Homo sapiens PHB2-human ENCAB081KLG DNA False 2017-01-27 ENCODE 1, 2 ENCFF505XYY 234987 ENCODE Processing Pipeline 457f2be02ed4e454fb54bf8d116fc1f2 https://www.encodeproject.org/files/ENCFF470LCU/@@download/ENCFF470LCU.bigBed hg19 released low read depth ENCFF565PXY bigWig signal p-value ENCSR924GXX ChIP-seq EFO:0002067 K562 cell line Homo sapiens PHB2-human ENCAB081KLG DNA False 2017-01-27 ENCODE 1 ENCFF229VMU, ENCFF910IKB 1285420980 ENCODE Processing Pipeline d9c7abfe55c09d26104078a5727150b0 https://www.encodeproject.org/files/ENCFF565PXY/@@download/ENCFF565PXY.bigWig GRCh38 released low read depth ENCFF423QHE bigWig signal p-value ENCSR924GXX ChIP-seq EFO:0002067 K562 cell line Homo sapiens PHB2-human ENCAB081KLG DNA False 2017-01-27 ENCODE 2 ENCFF227IZS, ENCFF802CIM 1023511874 ENCODE Processing Pipeline 66fbfdaeea8ee37bbc88752fd3da3386 https://www.encodeproject.org/files/ENCFF423QHE/@@download/ENCFF423QHE.bigWig GRCh38 released low read depth ENCFF271NTC bigWig signal p-value ENCSR924GXX ChIP-seq EFO:0002067 K562 cell line Homo sapiens PHB2-human ENCAB081KLG DNA False 2017-01-27 ENCODE 1, 2 ENCFF227IZS, ENCFF229VMU, ENCFF802CIM, ENCFF910IKB 1835987945 ENCODE Processing Pipeline 1632181c6cae889faf62282631e1bc66 https://www.encodeproject.org/files/ENCFF271NTC/@@download/ENCFF271NTC.bigWig GRCh38 released low read depth ENCFF827RID bigWig fold change over control ENCSR924GXX ChIP-seq EFO:0002067 K562 cell line Homo sapiens PHB2-human ENCAB081KLG DNA False 2017-01-27 ENCODE 1 ENCFF229VMU, ENCFF910IKB 1249100710 ENCODE Processing Pipeline 741865b4bce09f7125a094017c114dfa https://www.encodeproject.org/files/ENCFF827RID/@@download/ENCFF827RID.bigWig GRCh38 released low read depth ENCFF465MBL bigWig fold change over control ENCSR924GXX ChIP-seq EFO:0002067 K562 cell line Homo sapiens PHB2-human ENCAB081KLG DNA False 2017-01-27 ENCODE 2 ENCFF227IZS, ENCFF802CIM 1016906673 ENCODE Processing Pipeline f5c01ee0b26ece024afd12e0d8438b22 https://www.encodeproject.org/files/ENCFF465MBL/@@download/ENCFF465MBL.bigWig GRCh38 released low read depth ENCFF539UUP bigWig fold change over control ENCSR924GXX ChIP-seq EFO:0002067 K562 cell line Homo sapiens PHB2-human ENCAB081KLG DNA False 2017-01-27 ENCODE 1, 2 ENCFF227IZS, ENCFF229VMU, ENCFF802CIM, ENCFF910IKB 2060400364 ENCODE Processing Pipeline 5895110ffd6c38e812b4a4a0d7254fda https://www.encodeproject.org/files/ENCFF539UUP/@@download/ENCFF539UUP.bigWig GRCh38 released low read depth ENCFF460KXU bed narrowPeak peaks ENCSR924GXX ChIP-seq EFO:0002067 K562 cell line Homo sapiens PHB2-human ENCAB081KLG DNA False 2017-01-27 ENCODE 1 ENCFF229VMU, ENCFF910IKB 6559854 ENCODE Processing Pipeline d5c43ac0583934baf38c2668a9ac59ab https://www.encodeproject.org/files/ENCFF460KXU/@@download/ENCFF460KXU.bed.gz GRCh38 released low read depth ENCFF004DDR bed narrowPeak peaks ENCSR924GXX ChIP-seq EFO:0002067 K562 cell line Homo sapiens PHB2-human ENCAB081KLG DNA False 2017-01-27 ENCODE 2 ENCFF227IZS, ENCFF802CIM 6486265 ENCODE Processing Pipeline 950043a6f5ce35dfb7dabf5ef9a8112d https://www.encodeproject.org/files/ENCFF004DDR/@@download/ENCFF004DDR.bed.gz GRCh38 released low read depth ENCFF417RJF bed narrowPeak peaks ENCSR924GXX ChIP-seq EFO:0002067 K562 cell line Homo sapiens PHB2-human ENCAB081KLG DNA False 2017-01-27 ENCODE 1, 2 ENCFF227IZS, ENCFF229VMU, ENCFF802CIM, ENCFF910IKB 7197461 ENCODE Processing Pipeline 1185fef69c066d37829c4115ce75ec24 https://www.encodeproject.org/files/ENCFF417RJF/@@download/ENCFF417RJF.bed.gz GRCh38 released low read depth ENCFF052UGB bigBed narrowPeak peaks ENCSR924GXX ChIP-seq EFO:0002067 K562 cell line Homo sapiens PHB2-human ENCAB081KLG DNA False 2017-01-27 ENCODE 1 ENCFF460KXU 13237075 ENCODE Processing Pipeline 561fce5ccc7290de4f83246a05c30378 https://www.encodeproject.org/files/ENCFF052UGB/@@download/ENCFF052UGB.bigBed GRCh38 released low read depth ENCFF682ELN bigBed narrowPeak peaks ENCSR924GXX ChIP-seq EFO:0002067 K562 cell line Homo sapiens PHB2-human ENCAB081KLG DNA False 2017-01-27 ENCODE 2 ENCFF004DDR 13249317 ENCODE Processing Pipeline 7ebc1dc9bde08ed43f1dcde30adf4c52 https://www.encodeproject.org/files/ENCFF682ELN/@@download/ENCFF682ELN.bigBed GRCh38 released low read depth ENCFF400UZP bigBed narrowPeak peaks ENCSR924GXX ChIP-seq EFO:0002067 K562 cell line Homo sapiens PHB2-human ENCAB081KLG DNA False 2017-01-27 ENCODE 1, 2 ENCFF417RJF 13120843 ENCODE Processing Pipeline 102c895f93eb32f06dd937badb967761 https://www.encodeproject.org/files/ENCFF400UZP/@@download/ENCFF400UZP.bigBed GRCh38 released low read depth ENCFF028CLF bigBed narrowPeak conservative idr thresholded peaks ENCSR924GXX ChIP-seq EFO:0002067 K562 cell line Homo sapiens PHB2-human ENCAB081KLG DNA False 2017-01-27 ENCODE 1, 2 ENCFF111EXG 235116 ENCODE Processing Pipeline 7d53579d4cf7e1ccde6f06bb2af26dd0 https://www.encodeproject.org/files/ENCFF028CLF/@@download/ENCFF028CLF.bigBed GRCh38 released low read depth ENCFF988OXX bed narrowPeak optimal idr thresholded peaks ENCSR924GXX ChIP-seq EFO:0002067 K562 cell line Homo sapiens PHB2-human ENCAB081KLG DNA False 2017-01-27 ENCODE 1, 2 ENCFF004DDR, ENCFF417RJF, ENCFF419RSJ, ENCFF460KXU 134417 ENCODE Processing Pipeline 5c57af4ee5d1b18dd20c07695adbcf98 https://www.encodeproject.org/files/ENCFF988OXX/@@download/ENCFF988OXX.bed.gz GRCh38 released low read depth ENCFF111EXG bed narrowPeak conservative idr thresholded peaks ENCSR924GXX ChIP-seq EFO:0002067 K562 cell line Homo sapiens PHB2-human ENCAB081KLG DNA False 2017-01-27 ENCODE 1, 2 ENCFF004DDR, ENCFF417RJF, ENCFF419RSJ, ENCFF460KXU 89302 ENCODE Processing Pipeline 322741a82aca469029f5129e9f70f9f0 https://www.encodeproject.org/files/ENCFF111EXG/@@download/ENCFF111EXG.bed.gz GRCh38 released low read depth ENCFF776XQD bigBed narrowPeak optimal idr thresholded peaks ENCSR924GXX ChIP-seq EFO:0002067 K562 cell line Homo sapiens PHB2-human ENCAB081KLG DNA False 2017-01-27 ENCODE 1, 2 ENCFF988OXX 303725 ENCODE Processing Pipeline f812c5944bf86baaa9429facc9962442 https://www.encodeproject.org/files/ENCFF776XQD/@@download/ENCFF776XQD.bigBed GRCh38 released low read depth ENCFF000YOB bam alignments ENCSR000EFN ChIP-seq EFO:0002067 K562 cell line Homo sapiens HCFC1-human ENCAB000AHG DNA see document see document False 2012-08-20 ENCODE 2 1 459043417 Michael Snyder, Stanford 9da7bce746b7a3855fc31010f84ede6c https://www.encodeproject.org/files/ENCFF000YOB/@@download/ENCFF000YOB.bam hg19 archived low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample, missing derived_from missing control alignments ENCFF000YOC bam alignments ENCSR000EFN ChIP-seq EFO:0002067 K562 cell line Homo sapiens HCFC1-human ENCAB000AHG DNA see document see document False 2012-08-20 ENCODE 1 1 542874495 Michael Snyder, Stanford 2a8e8caa17e4deec1f91f97e93257449 https://www.encodeproject.org/files/ENCFF000YOC/@@download/ENCFF000YOC.bam hg19 archived low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample, missing derived_from missing control alignments ENCFF000YOD bigBed narrowPeak peaks ENCSR000EFN ChIP-seq EFO:0002067 K562 cell line Homo sapiens HCFC1-human ENCAB000AHG DNA see document see document False 2012-08-20 ENCODE ENCFF001VNH 2074550 Michael Snyder, Stanford 24556ad14169208e0db0c278750722d5 https://www.encodeproject.org/files/ENCFF000YOD/@@download/ENCFF000YOD.bigBed hg19 archived low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample missing control alignments ENCFF000YOE fastq reads ENCSR000EFN ChIP-seq EFO:0002067 K562 cell line Homo sapiens HCFC1-human ENCAB000AHG DNA see document see document False 2012-08-20 ENCODE 1 1 36 single-ended 1070829024 Michael Snyder, Stanford a55d85f91a18ea2850fc3b5053da5deb https://www.encodeproject.org/files/ENCFF000YOE/@@download/ENCFF000YOE.fastq.gz Illumina Genome Analyzer /files/ENCFF000YRB/ released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample missing control alignments ENCFF000YOG fastq reads ENCSR000EFN ChIP-seq EFO:0002067 K562 cell line Homo sapiens HCFC1-human ENCAB000AHG DNA see document see document False 2012-08-20 ENCODE 2 1 36 single-ended 793263569 Michael Snyder, Stanford d25df13fb7021a919f34f7316ee0e95c https://www.encodeproject.org/files/ENCFF000YOG/@@download/ENCFF000YOG.fastq.gz Illumina Genome Analyzer /files/ENCFF000YRB/ released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample missing control alignments ENCFF000YOI bigWig signal ENCSR000EFN ChIP-seq EFO:0002067 K562 cell line Homo sapiens HCFC1-human ENCAB000AHG DNA see document see document False 2012-08-20 ENCODE 374693403 Michael Snyder, Stanford 283a65221cdf2deb62b9992dc51c8db9 https://www.encodeproject.org/files/ENCFF000YOI/@@download/ENCFF000YOI.bigWig hg19 archived low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample, missing derived_from missing control alignments ENCFF001VNH bed narrowPeak peaks ENCSR000EFN ChIP-seq EFO:0002067 K562 cell line Homo sapiens HCFC1-human ENCAB000AHG DNA see document see document False 2012-08-20 ENCODE 798205 Michael Snyder, Stanford 0b23a5f7826f7719d4c7b71a54db8c89 https://www.encodeproject.org/files/ENCFF001VNH/@@download/ENCFF001VNH.bed.gz hg19 archived low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample, missing derived_from missing control alignments ENCFF068XVC bam alignments ENCSR000EFN ChIP-seq EFO:0002067 K562 cell line Homo sapiens HCFC1-human ENCAB000AHG DNA see document see document False 2012-08-20 ENCODE 2 36 ENCFF000YOG, ENCFF643CGH 623093231 ENCODE Processing Pipeline f09c6530480586f1aae943cc19954db9 https://www.encodeproject.org/files/ENCFF068XVC/@@download/ENCFF068XVC.bam GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample missing control alignments ENCFF220DXN bam unfiltered alignments ENCSR000EFN ChIP-seq EFO:0002067 K562 cell line Homo sapiens HCFC1-human ENCAB000AHG DNA see document see document False 2012-08-20 ENCODE 2 36 ENCFF000YOG, ENCFF643CGH 903954336 ENCODE Processing Pipeline 1890eea8c9530acaee88d031a50e3323 https://www.encodeproject.org/files/ENCFF220DXN/@@download/ENCFF220DXN.bam GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample missing control alignments ENCFF754SCV bam unfiltered alignments ENCSR000EFN ChIP-seq EFO:0002067 K562 cell line Homo sapiens HCFC1-human ENCAB000AHG DNA see document see document False 2012-08-20 ENCODE 1 36 ENCFF000YOE, ENCFF643CGH 1210723777 ENCODE Processing Pipeline e4e10e97836e16008bf50a6de0907762 https://www.encodeproject.org/files/ENCFF754SCV/@@download/ENCFF754SCV.bam GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample missing control alignments ENCFF976DWY bam alignments ENCSR000EFN ChIP-seq EFO:0002067 K562 cell line Homo sapiens HCFC1-human ENCAB000AHG DNA see document see document False 2012-08-20 ENCODE 1 36 ENCFF000YOE, ENCFF643CGH 836421921 ENCODE Processing Pipeline 3568280eedcf434ba1e93c18beed60f0 https://www.encodeproject.org/files/ENCFF976DWY/@@download/ENCFF976DWY.bam GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample missing control alignments ENCFF282DFJ bam unfiltered alignments ENCSR000EFN ChIP-seq EFO:0002067 K562 cell line Homo sapiens HCFC1-human ENCAB000AHG DNA see document see document False 2012-08-20 ENCODE 2 36 ENCFF000YOG, ENCFF807MUK 901054495 ENCODE Processing Pipeline d8dcbff43f8e5e4a9e33902aa6b59e7c https://www.encodeproject.org/files/ENCFF282DFJ/@@download/ENCFF282DFJ.bam hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample missing control alignments ENCFF906VXN bam alignments ENCSR000EFN ChIP-seq EFO:0002067 K562 cell line Homo sapiens HCFC1-human ENCAB000AHG DNA see document see document False 2012-08-20 ENCODE 2 36 ENCFF000YOG, ENCFF807MUK 623607592 ENCODE Processing Pipeline 44e2e94fe5c903937a9269cfd6cdfe21 https://www.encodeproject.org/files/ENCFF906VXN/@@download/ENCFF906VXN.bam hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample missing control alignments ENCFF807AJD bam unfiltered alignments ENCSR000EFN ChIP-seq EFO:0002067 K562 cell line Homo sapiens HCFC1-human ENCAB000AHG DNA see document see document False 2012-08-20 ENCODE 1 36 ENCFF000YOE, ENCFF807MUK 1206593043 ENCODE Processing Pipeline 6a15ca5621f22cde2774babd95d07ee3 https://www.encodeproject.org/files/ENCFF807AJD/@@download/ENCFF807AJD.bam hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample missing control alignments ENCFF042SFT bam alignments ENCSR000EFN ChIP-seq EFO:0002067 K562 cell line Homo sapiens HCFC1-human ENCAB000AHG DNA see document see document False 2012-08-20 ENCODE 1 36 ENCFF000YOE, ENCFF807MUK 837033830 ENCODE Processing Pipeline 43affdd36f5d53891db2717f9605ae02 https://www.encodeproject.org/files/ENCFF042SFT/@@download/ENCFF042SFT.bam hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample missing control alignments ENCFF692WZC bigBed narrowPeak optimal idr thresholded peaks ENCSR000EFN ChIP-seq EFO:0002067 K562 cell line Homo sapiens HCFC1-human ENCAB000AHG DNA see document see document False 2012-08-20 ENCODE 1, 2 ENCFF474NLG 488009 ENCODE Processing Pipeline fc99f02febba6bf7d286938d4fc6d61e https://www.encodeproject.org/files/ENCFF692WZC/@@download/ENCFF692WZC.bigBed hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample missing control alignments ENCFF943BDN bigWig signal p-value ENCSR000EFN ChIP-seq EFO:0002067 K562 cell line Homo sapiens HCFC1-human ENCAB000AHG DNA see document see document False 2012-08-20 ENCODE 2 ENCFF710NTS, ENCFF906VXN 407148822 ENCODE Processing Pipeline 6af395466802e78467b8cdf4e67d5127 https://www.encodeproject.org/files/ENCFF943BDN/@@download/ENCFF943BDN.bigWig hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample missing control alignments ENCFF782ELS bigWig signal p-value ENCSR000EFN ChIP-seq EFO:0002067 K562 cell line Homo sapiens HCFC1-human ENCAB000AHG DNA see document see document False 2012-08-20 ENCODE 1, 2 ENCFF042SFT, ENCFF710NTS, ENCFF906VXN 528887239 ENCODE Processing Pipeline 3bfeb4f6fb6909eeb1fa0ca71ec098be https://www.encodeproject.org/files/ENCFF782ELS/@@download/ENCFF782ELS.bigWig hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample missing control alignments ENCFF912AHN bed narrowPeak peaks ENCSR000EFN ChIP-seq EFO:0002067 K562 cell line Homo sapiens HCFC1-human ENCAB000AHG DNA see document see document False 2012-08-20 ENCODE 2 ENCFF710NTS, ENCFF906VXN 4867217 ENCODE Processing Pipeline 9166549a0bef72476e102ad417f38e98 https://www.encodeproject.org/files/ENCFF912AHN/@@download/ENCFF912AHN.bed.gz hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample missing control alignments ENCFF228TYH bigBed narrowPeak peaks ENCSR000EFN ChIP-seq EFO:0002067 K562 cell line Homo sapiens HCFC1-human ENCAB000AHG DNA see document see document False 2012-08-20 ENCODE 1, 2 ENCFF386FIZ 7876669 ENCODE Processing Pipeline e341b4bdd98369f587ee7507f826efa4 https://www.encodeproject.org/files/ENCFF228TYH/@@download/ENCFF228TYH.bigBed hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample missing control alignments ENCFF317AIN bed narrowPeak peaks ENCSR000EFN ChIP-seq EFO:0002067 K562 cell line Homo sapiens HCFC1-human ENCAB000AHG DNA see document see document False 2012-08-20 ENCODE 1 ENCFF042SFT, ENCFF710NTS 4992350 ENCODE Processing Pipeline 9fe7d779b69b121ed7b469075d758d9e https://www.encodeproject.org/files/ENCFF317AIN/@@download/ENCFF317AIN.bed.gz hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample missing control alignments ENCFF386FIZ bed narrowPeak peaks ENCSR000EFN ChIP-seq EFO:0002067 K562 cell line Homo sapiens HCFC1-human ENCAB000AHG DNA see document see document False 2012-08-20 ENCODE 1, 2 ENCFF042SFT, ENCFF710NTS, ENCFF906VXN 3510066 ENCODE Processing Pipeline 13d3449b2c1f2a3d85f276c4dff934a0 https://www.encodeproject.org/files/ENCFF386FIZ/@@download/ENCFF386FIZ.bed.gz hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample missing control alignments ENCFF098JZZ bigBed narrowPeak peaks ENCSR000EFN ChIP-seq EFO:0002067 K562 cell line Homo sapiens HCFC1-human ENCAB000AHG DNA see document see document False 2012-08-20 ENCODE 2 ENCFF912AHN 10790197 ENCODE Processing Pipeline fafc00eb1f98e20c3fae3675a13f350e https://www.encodeproject.org/files/ENCFF098JZZ/@@download/ENCFF098JZZ.bigBed hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample missing control alignments ENCFF780MBM bed narrowPeak conservative idr thresholded peaks ENCSR000EFN ChIP-seq EFO:0002067 K562 cell line Homo sapiens HCFC1-human ENCAB000AHG DNA see document see document False 2012-08-20 ENCODE 1, 2 ENCFF001TDO, ENCFF317AIN, ENCFF386FIZ, ENCFF912AHN 226888 ENCODE Processing Pipeline dca636cdd0e2849e9463ecb02a718f08 https://www.encodeproject.org/files/ENCFF780MBM/@@download/ENCFF780MBM.bed.gz hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample missing control alignments ENCFF264JMN bigWig fold change over control ENCSR000EFN ChIP-seq EFO:0002067 K562 cell line Homo sapiens HCFC1-human ENCAB000AHG DNA see document see document False 2012-08-20 ENCODE 2 ENCFF710NTS, ENCFF906VXN 336855166 ENCODE Processing Pipeline c35385d0754239f13bdc609abd58ceaf https://www.encodeproject.org/files/ENCFF264JMN/@@download/ENCFF264JMN.bigWig hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample missing control alignments ENCFF633TLX bigWig fold change over control ENCSR000EFN ChIP-seq EFO:0002067 K562 cell line Homo sapiens HCFC1-human ENCAB000AHG DNA see document see document False 2012-08-20 ENCODE 1, 2 ENCFF042SFT, ENCFF710NTS, ENCFF906VXN 633918672 ENCODE Processing Pipeline 86365d20617a92bef6cbaef004321c68 https://www.encodeproject.org/files/ENCFF633TLX/@@download/ENCFF633TLX.bigWig hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample missing control alignments ENCFF474NLG bed narrowPeak optimal idr thresholded peaks ENCSR000EFN ChIP-seq EFO:0002067 K562 cell line Homo sapiens HCFC1-human ENCAB000AHG DNA see document see document False 2012-08-20 ENCODE 1, 2 ENCFF001TDO, ENCFF317AIN, ENCFF386FIZ, ENCFF912AHN 236039 ENCODE Processing Pipeline fe108db88c03657b64f8b0ec52bd7c3e https://www.encodeproject.org/files/ENCFF474NLG/@@download/ENCFF474NLG.bed.gz hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample missing control alignments ENCFF618MGF bigWig signal p-value ENCSR000EFN ChIP-seq EFO:0002067 K562 cell line Homo sapiens HCFC1-human ENCAB000AHG DNA see document see document False 2012-08-20 ENCODE 1 ENCFF042SFT, ENCFF710NTS 445521627 ENCODE Processing Pipeline 1e5f9f98d71bdf1a21db66080a3b9c5b https://www.encodeproject.org/files/ENCFF618MGF/@@download/ENCFF618MGF.bigWig hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample missing control alignments ENCFF434RSV bigBed narrowPeak peaks ENCSR000EFN ChIP-seq EFO:0002067 K562 cell line Homo sapiens HCFC1-human ENCAB000AHG DNA see document see document False 2012-08-20 ENCODE 1 ENCFF317AIN 10917902 ENCODE Processing Pipeline a7b62eb4fa15d74b8879587928aa9afb https://www.encodeproject.org/files/ENCFF434RSV/@@download/ENCFF434RSV.bigBed hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample missing control alignments ENCFF196HTD bigWig fold change over control ENCSR000EFN ChIP-seq EFO:0002067 K562 cell line Homo sapiens HCFC1-human ENCAB000AHG DNA see document see document False 2012-08-20 ENCODE 1 ENCFF042SFT, ENCFF710NTS 422635231 ENCODE Processing Pipeline f1a828f6ecc0a077e2dae93ffd470573 https://www.encodeproject.org/files/ENCFF196HTD/@@download/ENCFF196HTD.bigWig hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample missing control alignments ENCFF402XBZ bigBed narrowPeak conservative idr thresholded peaks ENCSR000EFN ChIP-seq EFO:0002067 K562 cell line Homo sapiens HCFC1-human ENCAB000AHG DNA see document see document False 2012-08-20 ENCODE 1, 2 ENCFF780MBM 475799 ENCODE Processing Pipeline 5ec6ca232a3515128fa791163f59022d https://www.encodeproject.org/files/ENCFF402XBZ/@@download/ENCFF402XBZ.bigBed hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample missing control alignments ENCFF169FNX bigWig signal p-value ENCSR000EFN ChIP-seq EFO:0002067 K562 cell line Homo sapiens HCFC1-human ENCAB000AHG DNA see document see document False 2012-08-20 ENCODE 1, 2 ENCFF068XVC, ENCFF976DWY 528813799 ENCODE Processing Pipeline 3d4e6a61ce51363c2e8225a0982ff362 https://www.encodeproject.org/files/ENCFF169FNX/@@download/ENCFF169FNX.bigWig GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample missing control alignments ENCFF879XKY bigWig fold change over control ENCSR000EFN ChIP-seq EFO:0002067 K562 cell line Homo sapiens HCFC1-human ENCAB000AHG DNA see document see document False 2012-08-20 ENCODE 1 ENCFF976DWY 427672465 ENCODE Processing Pipeline 8b8423aaed8f04c6b481851a8ca1bdb8 https://www.encodeproject.org/files/ENCFF879XKY/@@download/ENCFF879XKY.bigWig GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample missing control alignments ENCFF497XBI bigWig fold change over control ENCSR000EFN ChIP-seq EFO:0002067 K562 cell line Homo sapiens HCFC1-human ENCAB000AHG DNA see document see document False 2012-08-20 ENCODE 2 ENCFF068XVC 337251886 ENCODE Processing Pipeline c779ea54589214f70d7cd540f2d94f1f https://www.encodeproject.org/files/ENCFF497XBI/@@download/ENCFF497XBI.bigWig GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample missing control alignments ENCFF339TEC bigWig fold change over control ENCSR000EFN ChIP-seq EFO:0002067 K562 cell line Homo sapiens HCFC1-human ENCAB000AHG DNA see document see document False 2012-08-20 ENCODE 1, 2 ENCFF068XVC, ENCFF976DWY 630355091 ENCODE Processing Pipeline d67df5a4f5f1f64d6d16a6b5eebeadc0 https://www.encodeproject.org/files/ENCFF339TEC/@@download/ENCFF339TEC.bigWig GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample missing control alignments ENCFF865AWY bigWig signal p-value ENCSR000EFN ChIP-seq EFO:0002067 K562 cell line Homo sapiens HCFC1-human ENCAB000AHG DNA see document see document False 2012-08-20 ENCODE 1 ENCFF976DWY 588831507 ENCODE Processing Pipeline 8eeabd40452ac5ce5c6af09ace256805 https://www.encodeproject.org/files/ENCFF865AWY/@@download/ENCFF865AWY.bigWig GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample missing control alignments ENCFF597CNC bed narrowPeak peaks ENCSR000EFN ChIP-seq EFO:0002067 K562 cell line Homo sapiens HCFC1-human ENCAB000AHG DNA see document see document False 2012-08-20 ENCODE 1 ENCFF976DWY 5003141 ENCODE Processing Pipeline c3ef2be2351d104b4fee1a07992f1793 https://www.encodeproject.org/files/ENCFF597CNC/@@download/ENCFF597CNC.bed.gz GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample missing control alignments ENCFF531RWP bigBed narrowPeak peaks ENCSR000EFN ChIP-seq EFO:0002067 K562 cell line Homo sapiens HCFC1-human ENCAB000AHG DNA see document see document False 2012-08-20 ENCODE 1 ENCFF597CNC 10933724 ENCODE Processing Pipeline 3d69330fcba1b8123e7986af46ba8df7 https://www.encodeproject.org/files/ENCFF531RWP/@@download/ENCFF531RWP.bigBed GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample missing control alignments ENCFF734CJH bed narrowPeak conservative idr thresholded peaks ENCSR000EFN ChIP-seq EFO:0002067 K562 cell line Homo sapiens HCFC1-human ENCAB000AHG DNA see document see document False 2012-08-20 ENCODE 1, 2 ENCFF138HLO, ENCFF419RSJ, ENCFF587HWD, ENCFF597CNC 227045 ENCODE Processing Pipeline 3e156bea19565d96dcbe468174d3ce4e https://www.encodeproject.org/files/ENCFF734CJH/@@download/ENCFF734CJH.bed.gz GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample missing control alignments ENCFF167RXK bed narrowPeak optimal idr thresholded peaks ENCSR000EFN ChIP-seq EFO:0002067 K562 cell line Homo sapiens HCFC1-human ENCAB000AHG DNA see document see document False 2012-08-20 ENCODE 1, 2 ENCFF138HLO, ENCFF419RSJ, ENCFF587HWD, ENCFF597CNC 231740 ENCODE Processing Pipeline 9fb1d6927269b28a07d2a4418fb2486b https://www.encodeproject.org/files/ENCFF167RXK/@@download/ENCFF167RXK.bed.gz GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample missing control alignments ENCFF444VMI bigWig signal p-value ENCSR000EFN ChIP-seq EFO:0002067 K562 cell line Homo sapiens HCFC1-human ENCAB000AHG DNA see document see document False 2012-08-20 ENCODE 2 ENCFF068XVC 375835281 ENCODE Processing Pipeline 6a01cbb8d12c24868aadeb5bdb28c688 https://www.encodeproject.org/files/ENCFF444VMI/@@download/ENCFF444VMI.bigWig GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample missing control alignments ENCFF587HWD bed narrowPeak peaks ENCSR000EFN ChIP-seq EFO:0002067 K562 cell line Homo sapiens HCFC1-human ENCAB000AHG DNA see document see document False 2012-08-20 ENCODE 2 ENCFF068XVC 4862254 ENCODE Processing Pipeline b60c9ca96400e0311c85b087cf7f6d5d https://www.encodeproject.org/files/ENCFF587HWD/@@download/ENCFF587HWD.bed.gz GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample missing control alignments ENCFF138HLO bed narrowPeak peaks ENCSR000EFN ChIP-seq EFO:0002067 K562 cell line Homo sapiens HCFC1-human ENCAB000AHG DNA see document see document False 2012-08-20 ENCODE 1, 2 ENCFF068XVC, ENCFF976DWY 3501333 ENCODE Processing Pipeline 4eab57df1806b70d1e94a62b440a02d2 https://www.encodeproject.org/files/ENCFF138HLO/@@download/ENCFF138HLO.bed.gz GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample missing control alignments ENCFF225QYB bigBed narrowPeak conservative idr thresholded peaks ENCSR000EFN ChIP-seq EFO:0002067 K562 cell line Homo sapiens HCFC1-human ENCAB000AHG DNA see document see document False 2012-08-20 ENCODE 1, 2 ENCFF734CJH 477204 ENCODE Processing Pipeline bc38a2f849cf99b5b7bba221f320f6c8 https://www.encodeproject.org/files/ENCFF225QYB/@@download/ENCFF225QYB.bigBed GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample missing control alignments ENCFF900MKF bigBed narrowPeak peaks ENCSR000EFN ChIP-seq EFO:0002067 K562 cell line Homo sapiens HCFC1-human ENCAB000AHG DNA see document see document False 2012-08-20 ENCODE 2 ENCFF587HWD 10788770 ENCODE Processing Pipeline 15437315fe9da296ac91f30ac26dc278 https://www.encodeproject.org/files/ENCFF900MKF/@@download/ENCFF900MKF.bigBed GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample missing control alignments ENCFF388XTZ bigBed narrowPeak optimal idr thresholded peaks ENCSR000EFN ChIP-seq EFO:0002067 K562 cell line Homo sapiens HCFC1-human ENCAB000AHG DNA see document see document False 2012-08-20 ENCODE 1, 2 ENCFF167RXK 482827 ENCODE Processing Pipeline 4e68a055243498f8dda1fb22e3bb758f https://www.encodeproject.org/files/ENCFF388XTZ/@@download/ENCFF388XTZ.bigBed GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample missing control alignments ENCFF707SAL bigBed narrowPeak peaks ENCSR000EFN ChIP-seq EFO:0002067 K562 cell line Homo sapiens HCFC1-human ENCAB000AHG DNA see document see document False 2012-08-20 ENCODE 1, 2 ENCFF138HLO 7859558 ENCODE Processing Pipeline ce30f50e7ccee67dbc4231ee6eac0c43 https://www.encodeproject.org/files/ENCFF707SAL/@@download/ENCFF707SAL.bigBed GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample missing control alignments ENCFF243UPJ bam unfiltered alignments ENCSR157TCS ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCE1-human ENCAB550CKA DNA False 2016-07-28 ENCODE 2 100 ENCFF531SYI, ENCFF615EVJ, ENCFF807MUK 4872863259 ENCODE Processing Pipeline e710c145a46d4a460433789146b64ce8 https://www.encodeproject.org/files/ENCFF243UPJ/@@download/ENCFF243UPJ.bam hg19 released mild to moderate bottlenecking ENCFF339MMC bam unfiltered alignments ENCSR157TCS ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCE1-human ENCAB550CKA DNA False 2016-07-28 ENCODE 1 100 ENCFF034ESF, ENCFF668WFT, ENCFF807MUK 5155122463 ENCODE Processing Pipeline 9beaba14a91a608d09da2f0588bac574 https://www.encodeproject.org/files/ENCFF339MMC/@@download/ENCFF339MMC.bam hg19 released mild to moderate bottlenecking ENCFF034ESF fastq reads ENCSR157TCS ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCE1-human ENCAB550CKA DNA False 2016-07-28 ENCODE 1 1 100 paired-ended 1 ENCFF668WFT 2412170659 Michael Snyder, Stanford a0d12a165a3927c1c26fe94230d61567 SRA:SRR5111192 https://www.encodeproject.org/files/ENCFF034ESF/@@download/ENCFF034ESF.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFF/ released mild to moderate bottlenecking ENCFF668WFT fastq reads ENCSR157TCS ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCE1-human ENCAB550CKA DNA False 2016-07-28 ENCODE 1 1 100 paired-ended 2 ENCFF034ESF 2497130301 Michael Snyder, Stanford b8565af8cf5bc7a28f5cc43f5d6a08d4 SRA:SRR5111192 https://www.encodeproject.org/files/ENCFF668WFT/@@download/ENCFF668WFT.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFH/ released mild to moderate bottlenecking ENCFF531SYI fastq reads ENCSR157TCS ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCE1-human ENCAB550CKA DNA False 2016-07-28 ENCODE 2 1 100 paired-ended 2 ENCFF615EVJ 2303841701 Michael Snyder, Stanford 67d6eb51266c1cad313fbfe2ec6c0096 SRA:SRR5111191 https://www.encodeproject.org/files/ENCFF531SYI/@@download/ENCFF531SYI.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFA/ released mild to moderate bottlenecking ENCFF615EVJ fastq reads ENCSR157TCS ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCE1-human ENCAB550CKA DNA False 2016-07-28 ENCODE 2 1 100 paired-ended 1 ENCFF531SYI 2237816414 Michael Snyder, Stanford f650510769000a6cec4eaf5f47002509 SRA:SRR5111191 https://www.encodeproject.org/files/ENCFF615EVJ/@@download/ENCFF615EVJ.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFD/ released mild to moderate bottlenecking ENCFF115WLQ bam alignments ENCSR157TCS ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCE1-human ENCAB550CKA DNA False 2016-07-28 ENCODE 2 100 ENCFF531SYI, ENCFF615EVJ, ENCFF807MUK 3844067971 ENCODE Processing Pipeline e0b7f26ffdcb5bc0aea3e2b7da04be9f https://www.encodeproject.org/files/ENCFF115WLQ/@@download/ENCFF115WLQ.bam hg19 released mild to moderate bottlenecking ENCFF868URB bam alignments ENCSR157TCS ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCE1-human ENCAB550CKA DNA False 2016-07-28 ENCODE 1 100 ENCFF034ESF, ENCFF668WFT, ENCFF807MUK 3819756270 ENCODE Processing Pipeline f9bc088cd6904defad61fd60e82d9ddc https://www.encodeproject.org/files/ENCFF868URB/@@download/ENCFF868URB.bam hg19 released mild to moderate bottlenecking ENCFF107JFM bigWig signal p-value ENCSR157TCS ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCE1-human ENCAB550CKA DNA False 2016-07-28 ENCODE 2 ENCFF051LWI, ENCFF115WLQ 1099763285 ENCODE Processing Pipeline a498080644aa03c7808a6a5392c2157f https://www.encodeproject.org/files/ENCFF107JFM/@@download/ENCFF107JFM.bigWig hg19 released mild to moderate bottlenecking ENCFF125YCK bigWig fold change over control ENCSR157TCS ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCE1-human ENCAB550CKA DNA False 2016-07-28 ENCODE 2 ENCFF051LWI, ENCFF115WLQ 1093985226 ENCODE Processing Pipeline 62b7e0000e04d268c87185c222663220 https://www.encodeproject.org/files/ENCFF125YCK/@@download/ENCFF125YCK.bigWig hg19 released mild to moderate bottlenecking ENCFF816RJG bam unfiltered alignments ENCSR157TCS ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCE1-human ENCAB550CKA DNA False 2016-07-28 ENCODE 2 100 ENCFF531SYI, ENCFF615EVJ, ENCFF643CGH 4874350280 ENCODE Processing Pipeline bbad078280800583d78c7bb1f2c51779 https://www.encodeproject.org/files/ENCFF816RJG/@@download/ENCFF816RJG.bam GRCh38 released mild to moderate bottlenecking ENCFF269YDC bam unfiltered alignments ENCSR157TCS ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCE1-human ENCAB550CKA DNA False 2016-07-28 ENCODE 1 100 ENCFF034ESF, ENCFF643CGH, ENCFF668WFT 5155631449 ENCODE Processing Pipeline 2ea1e21325f5727adbd82cdc04847166 https://www.encodeproject.org/files/ENCFF269YDC/@@download/ENCFF269YDC.bam GRCh38 released mild to moderate bottlenecking ENCFF294UTM bam alignments ENCSR157TCS ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCE1-human ENCAB550CKA DNA False 2016-07-28 ENCODE 2 100 ENCFF531SYI, ENCFF615EVJ, ENCFF643CGH 3846528508 ENCODE Processing Pipeline 5a7301cf90baee3667d053624e9987e7 https://www.encodeproject.org/files/ENCFF294UTM/@@download/ENCFF294UTM.bam GRCh38 released mild to moderate bottlenecking ENCFF387BDW bam alignments ENCSR157TCS ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCE1-human ENCAB550CKA DNA False 2016-07-28 ENCODE 1 100 ENCFF034ESF, ENCFF643CGH, ENCFF668WFT 3822377080 ENCODE Processing Pipeline 78d515ea9cc89fc2ae3a9de068f4cb5c https://www.encodeproject.org/files/ENCFF387BDW/@@download/ENCFF387BDW.bam GRCh38 released mild to moderate bottlenecking ENCFF299MZX bigWig signal p-value ENCSR157TCS ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCE1-human ENCAB550CKA DNA False 2016-07-28 ENCODE 1 ENCFF387BDW, ENCFF910IKB 1146509705 ENCODE Processing Pipeline 4507c3910423f8e5732a122439a6f6ab https://www.encodeproject.org/files/ENCFF299MZX/@@download/ENCFF299MZX.bigWig GRCh38 released mild to moderate bottlenecking ENCFF641SPH bigWig signal p-value ENCSR157TCS ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCE1-human ENCAB550CKA DNA False 2016-07-28 ENCODE 2 ENCFF227IZS, ENCFF294UTM 936788768 ENCODE Processing Pipeline 3f93860291752d5ddc6c45ecf4398e04 https://www.encodeproject.org/files/ENCFF641SPH/@@download/ENCFF641SPH.bigWig GRCh38 released mild to moderate bottlenecking ENCFF700OGW bigWig signal p-value ENCSR157TCS ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCE1-human ENCAB550CKA DNA False 2016-07-28 ENCODE 1, 2 ENCFF227IZS, ENCFF294UTM, ENCFF387BDW, ENCFF910IKB 1963141551 ENCODE Processing Pipeline 96a3b417e7dca7fa1fbd245581aff341 https://www.encodeproject.org/files/ENCFF700OGW/@@download/ENCFF700OGW.bigWig GRCh38 released mild to moderate bottlenecking ENCFF714ASE bigWig fold change over control ENCSR157TCS ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCE1-human ENCAB550CKA DNA False 2016-07-28 ENCODE 1 ENCFF387BDW, ENCFF910IKB 1100568844 ENCODE Processing Pipeline d723bbfc0cb239cb12ecc9f43a4e91ec https://www.encodeproject.org/files/ENCFF714ASE/@@download/ENCFF714ASE.bigWig GRCh38 released mild to moderate bottlenecking ENCFF280JMW bigWig fold change over control ENCSR157TCS ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCE1-human ENCAB550CKA DNA False 2016-07-28 ENCODE 2 ENCFF227IZS, ENCFF294UTM 1094511364 ENCODE Processing Pipeline 62de3f5e7c21b6772ecf79592815b3ac https://www.encodeproject.org/files/ENCFF280JMW/@@download/ENCFF280JMW.bigWig GRCh38 released mild to moderate bottlenecking ENCFF939SCH bigWig fold change over control ENCSR157TCS ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCE1-human ENCAB550CKA DNA False 2016-07-28 ENCODE 1, 2 ENCFF227IZS, ENCFF294UTM, ENCFF387BDW, ENCFF910IKB 2028167822 ENCODE Processing Pipeline 72271319d12267bf6484d58fbb4864a0 https://www.encodeproject.org/files/ENCFF939SCH/@@download/ENCFF939SCH.bigWig GRCh38 released mild to moderate bottlenecking ENCFF714QFT bed narrowPeak peaks ENCSR157TCS ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCE1-human ENCAB550CKA DNA False 2016-07-28 ENCODE 1 ENCFF387BDW, ENCFF910IKB 7036368 ENCODE Processing Pipeline 83a131a0e537cbc0f623d4adfc8b9ec2 https://www.encodeproject.org/files/ENCFF714QFT/@@download/ENCFF714QFT.bed.gz GRCh38 released mild to moderate bottlenecking ENCFF361OHW bed narrowPeak peaks ENCSR157TCS ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCE1-human ENCAB550CKA DNA False 2016-07-28 ENCODE 2 ENCFF227IZS, ENCFF294UTM 6964158 ENCODE Processing Pipeline ee9b3d8b92752a01cb4f31f7aea4bdd7 https://www.encodeproject.org/files/ENCFF361OHW/@@download/ENCFF361OHW.bed.gz GRCh38 released mild to moderate bottlenecking ENCFF993DRQ bed narrowPeak peaks ENCSR157TCS ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCE1-human ENCAB550CKA DNA False 2016-07-28 ENCODE 1, 2 ENCFF227IZS, ENCFF294UTM, ENCFF387BDW, ENCFF910IKB 7106346 ENCODE Processing Pipeline 924a15247057c31eb932639946fd80a9 https://www.encodeproject.org/files/ENCFF993DRQ/@@download/ENCFF993DRQ.bed.gz GRCh38 released mild to moderate bottlenecking ENCFF694AIS bigBed narrowPeak peaks ENCSR157TCS ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCE1-human ENCAB550CKA DNA False 2016-07-28 ENCODE 1 ENCFF714QFT 12824724 ENCODE Processing Pipeline c3821e1e4e257d91d236b90c86ac5d4c https://www.encodeproject.org/files/ENCFF694AIS/@@download/ENCFF694AIS.bigBed GRCh38 released mild to moderate bottlenecking ENCFF934MWQ bigBed narrowPeak peaks ENCSR157TCS ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCE1-human ENCAB550CKA DNA False 2016-07-28 ENCODE 2 ENCFF361OHW 12987654 ENCODE Processing Pipeline 063db3a832c050d0f18242a7732bfc02 https://www.encodeproject.org/files/ENCFF934MWQ/@@download/ENCFF934MWQ.bigBed GRCh38 released mild to moderate bottlenecking ENCFF751YOC bigBed narrowPeak peaks ENCSR157TCS ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCE1-human ENCAB550CKA DNA False 2016-07-28 ENCODE 1, 2 ENCFF993DRQ 12617901 ENCODE Processing Pipeline 3fcea7f0840530396c6c0d4e38615501 https://www.encodeproject.org/files/ENCFF751YOC/@@download/ENCFF751YOC.bigBed GRCh38 released mild to moderate bottlenecking ENCFF355IGX bed narrowPeak conservative idr thresholded peaks ENCSR157TCS ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCE1-human ENCAB550CKA DNA False 2016-07-28 ENCODE 1, 2 ENCFF361OHW, ENCFF419RSJ, ENCFF714QFT, ENCFF993DRQ 414697 ENCODE Processing Pipeline cd9b36fedd530fc6d8ce1f485971b921 https://www.encodeproject.org/files/ENCFF355IGX/@@download/ENCFF355IGX.bed.gz GRCh38 released mild to moderate bottlenecking ENCFF086ULZ bigBed narrowPeak conservative idr thresholded peaks ENCSR157TCS ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCE1-human ENCAB550CKA DNA False 2016-07-28 ENCODE 1, 2 ENCFF355IGX 852318 ENCODE Processing Pipeline 28da30631ea4ddba708bc6b627967e62 https://www.encodeproject.org/files/ENCFF086ULZ/@@download/ENCFF086ULZ.bigBed GRCh38 released mild to moderate bottlenecking ENCFF435SZS bed narrowPeak optimal idr thresholded peaks ENCSR157TCS ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCE1-human ENCAB550CKA DNA False 2016-07-28 ENCODE 1, 2 ENCFF361OHW, ENCFF419RSJ, ENCFF714QFT, ENCFF993DRQ 628471 ENCODE Processing Pipeline 8bfd54d7b34ff6b8b5afaebb7957e9f7 https://www.encodeproject.org/files/ENCFF435SZS/@@download/ENCFF435SZS.bed.gz GRCh38 released mild to moderate bottlenecking ENCFF871WOL bigBed narrowPeak optimal idr thresholded peaks ENCSR157TCS ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCE1-human ENCAB550CKA DNA False 2016-07-28 ENCODE 1, 2 ENCFF435SZS 1168038 ENCODE Processing Pipeline ec2513589de29df6755f5fcfe02a8001 https://www.encodeproject.org/files/ENCFF871WOL/@@download/ENCFF871WOL.bigBed GRCh38 released mild to moderate bottlenecking ENCFF156YWV bigWig signal p-value ENCSR157TCS ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCE1-human ENCAB550CKA DNA False 2016-07-28 ENCODE 1 ENCFF581ZJL, ENCFF868URB 1121370854 ENCODE Processing Pipeline f89957ffb58c0e71b3f75a5ea6387a5a https://www.encodeproject.org/files/ENCFF156YWV/@@download/ENCFF156YWV.bigWig hg19 released mild to moderate bottlenecking ENCFF149IXH bigBed narrowPeak peaks ENCSR157TCS ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCE1-human ENCAB550CKA DNA False 2016-07-28 ENCODE 1 ENCFF216OFC 12825711 ENCODE Processing Pipeline 5937b201014a37f73916a99fc0b9c636 https://www.encodeproject.org/files/ENCFF149IXH/@@download/ENCFF149IXH.bigBed hg19 released mild to moderate bottlenecking ENCFF217ZRA bigWig fold change over control ENCSR157TCS ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCE1-human ENCAB550CKA DNA False 2016-07-28 ENCODE 1 ENCFF581ZJL, ENCFF868URB 1103190349 ENCODE Processing Pipeline 877196273e2db3fa7caf578ec6986613 https://www.encodeproject.org/files/ENCFF217ZRA/@@download/ENCFF217ZRA.bigWig hg19 released mild to moderate bottlenecking ENCFF216OFC bed narrowPeak peaks ENCSR157TCS ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCE1-human ENCAB550CKA DNA False 2016-07-28 ENCODE 1 ENCFF581ZJL, ENCFF868URB 7046613 ENCODE Processing Pipeline 46d98ee5e5f4ed73ee11ee9bf5aa5bd7 https://www.encodeproject.org/files/ENCFF216OFC/@@download/ENCFF216OFC.bed.gz hg19 released mild to moderate bottlenecking ENCFF704QCS bed narrowPeak peaks ENCSR157TCS ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCE1-human ENCAB550CKA DNA False 2016-07-28 ENCODE 1, 2 ENCFF051LWI, ENCFF115WLQ, ENCFF581ZJL, ENCFF868URB 7123376 ENCODE Processing Pipeline 803bc987900fd64dee1c82633eb30979 https://www.encodeproject.org/files/ENCFF704QCS/@@download/ENCFF704QCS.bed.gz hg19 released mild to moderate bottlenecking ENCFF896SOU bigWig signal p-value ENCSR157TCS ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCE1-human ENCAB550CKA DNA False 2016-07-28 ENCODE 1, 2 ENCFF051LWI, ENCFF115WLQ, ENCFF581ZJL, ENCFF868URB 1824693928 ENCODE Processing Pipeline f57ced610b76dc73cf01bc2a77ab8bc7 https://www.encodeproject.org/files/ENCFF896SOU/@@download/ENCFF896SOU.bigWig hg19 released mild to moderate bottlenecking ENCFF348YUO bigWig fold change over control ENCSR157TCS ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCE1-human ENCAB550CKA DNA False 2016-07-28 ENCODE 1, 2 ENCFF051LWI, ENCFF115WLQ, ENCFF581ZJL, ENCFF868URB 2017661496 ENCODE Processing Pipeline 899e40ea7e51bca340da6f3a340cc469 https://www.encodeproject.org/files/ENCFF348YUO/@@download/ENCFF348YUO.bigWig hg19 released mild to moderate bottlenecking ENCFF118OEM bed narrowPeak peaks ENCSR157TCS ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCE1-human ENCAB550CKA DNA False 2016-07-28 ENCODE 2 ENCFF051LWI, ENCFF115WLQ 6930776 ENCODE Processing Pipeline 7ebe12154b71d7b0c29387f0c8cd6fa8 https://www.encodeproject.org/files/ENCFF118OEM/@@download/ENCFF118OEM.bed.gz hg19 released mild to moderate bottlenecking ENCFF811SJN bed narrowPeak conservative idr thresholded peaks ENCSR157TCS ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCE1-human ENCAB550CKA DNA False 2016-07-28 ENCODE 1, 2 ENCFF001TDO, ENCFF118OEM, ENCFF216OFC, ENCFF704QCS 415363 ENCODE Processing Pipeline 9d94ddf8c251fb24c62858a99c618dc8 https://www.encodeproject.org/files/ENCFF811SJN/@@download/ENCFF811SJN.bed.gz hg19 released mild to moderate bottlenecking ENCFF622RBW bed narrowPeak optimal idr thresholded peaks ENCSR157TCS ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCE1-human ENCAB550CKA DNA False 2016-07-28 ENCODE 1, 2 ENCFF001TDO, ENCFF118OEM, ENCFF216OFC, ENCFF704QCS 630202 ENCODE Processing Pipeline 5f057957225cf1e6e0f6ab38a3f8c7fd https://www.encodeproject.org/files/ENCFF622RBW/@@download/ENCFF622RBW.bed.gz hg19 released mild to moderate bottlenecking ENCFF956MXA bigBed narrowPeak optimal idr thresholded peaks ENCSR157TCS ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCE1-human ENCAB550CKA DNA False 2016-07-28 ENCODE 1, 2 ENCFF622RBW 1170201 ENCODE Processing Pipeline 561e44448f519e22f3ec186c8fa8ab88 https://www.encodeproject.org/files/ENCFF956MXA/@@download/ENCFF956MXA.bigBed hg19 released mild to moderate bottlenecking ENCFF005HYP bigBed narrowPeak conservative idr thresholded peaks ENCSR157TCS ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCE1-human ENCAB550CKA DNA False 2016-07-28 ENCODE 1, 2 ENCFF811SJN 851819 ENCODE Processing Pipeline 405fd551982fa8b674917b8e49da3660 https://www.encodeproject.org/files/ENCFF005HYP/@@download/ENCFF005HYP.bigBed hg19 released mild to moderate bottlenecking ENCFF737OVH bigBed narrowPeak peaks ENCSR157TCS ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCE1-human ENCAB550CKA DNA False 2016-07-28 ENCODE 2 ENCFF118OEM 12941751 ENCODE Processing Pipeline 7867ad43b8dc6912f38ce2ac15c56e80 https://www.encodeproject.org/files/ENCFF737OVH/@@download/ENCFF737OVH.bigBed hg19 released mild to moderate bottlenecking ENCFF517KZY bigBed narrowPeak peaks ENCSR157TCS ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCE1-human ENCAB550CKA DNA False 2016-07-28 ENCODE 1, 2 ENCFF704QCS 12632029 ENCODE Processing Pipeline 0f01a240659c3b24d5cfcaa01c3dd1f4 https://www.encodeproject.org/files/ENCFF517KZY/@@download/ENCFF517KZY.bigBed hg19 released mild to moderate bottlenecking ENCFF185NFH bam unfiltered alignments ENCSR041AXL ChIP-seq EFO:0002067 K562 cell line Homo sapiens RFX1-human ENCAB000BCV DNA False 2016-06-23 ENCODE 2 100 ENCFF280GFD, ENCFF807MUK, ENCFF899IKW 4712313304 ENCODE Processing Pipeline 462b112e889e4c179963742f4736315e https://www.encodeproject.org/files/ENCFF185NFH/@@download/ENCFF185NFH.bam hg19 released low read depth, mild to moderate bottlenecking missing control alignments ENCFF437PTI bam unfiltered alignments ENCSR041AXL ChIP-seq EFO:0002067 K562 cell line Homo sapiens RFX1-human ENCAB000BCV DNA False 2016-06-23 ENCODE 1 100 ENCFF677RCM, ENCFF807MUK, ENCFF954WVJ 4205675976 ENCODE Processing Pipeline a70ae21138fe1d8705bb863e995b2b14 https://www.encodeproject.org/files/ENCFF437PTI/@@download/ENCFF437PTI.bam hg19 released low read depth, mild to moderate bottlenecking missing control alignments ENCFF954WVJ fastq reads ENCSR041AXL ChIP-seq EFO:0002067 K562 cell line Homo sapiens RFX1-human ENCAB000BCV DNA False 2016-06-23 ENCODE 1 1 100 paired-ended 1 ENCFF677RCM 1941634939 Michael Snyder, Stanford 48ffb9f4097a196342b821622ecf4d80 SRA:SRR5112435 https://www.encodeproject.org/files/ENCFF954WVJ/@@download/ENCFF954WVJ.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFF/ released low read depth, mild to moderate bottlenecking missing control alignments ENCFF677RCM fastq reads ENCSR041AXL ChIP-seq EFO:0002067 K562 cell line Homo sapiens RFX1-human ENCAB000BCV DNA False 2016-06-23 ENCODE 1 1 100 paired-ended 2 ENCFF954WVJ 1974112198 Michael Snyder, Stanford 40ee0c3a3032f9c292822ad3bbd8f4b3 SRA:SRR5112435 https://www.encodeproject.org/files/ENCFF677RCM/@@download/ENCFF677RCM.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFH/ released low read depth, mild to moderate bottlenecking missing control alignments ENCFF899IKW fastq reads ENCSR041AXL ChIP-seq EFO:0002067 K562 cell line Homo sapiens RFX1-human ENCAB000BCV DNA False 2016-06-23 ENCODE 2 1 100 paired-ended 1 ENCFF280GFD 2180299930 Michael Snyder, Stanford 19a6177f511fc54cb59d191f562ebd00 SRA:SRR5112434 https://www.encodeproject.org/files/ENCFF899IKW/@@download/ENCFF899IKW.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFD/ released low read depth, mild to moderate bottlenecking missing control alignments ENCFF280GFD fastq reads ENCSR041AXL ChIP-seq EFO:0002067 K562 cell line Homo sapiens RFX1-human ENCAB000BCV DNA False 2016-06-23 ENCODE 2 1 100 paired-ended 2 ENCFF899IKW 2252705431 Michael Snyder, Stanford 391251e4993ddb7bbc3ccf133adf80cc SRA:SRR5112434 https://www.encodeproject.org/files/ENCFF280GFD/@@download/ENCFF280GFD.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFA/ released low read depth, mild to moderate bottlenecking missing control alignments ENCFF862UZN bam alignments ENCSR041AXL ChIP-seq EFO:0002067 K562 cell line Homo sapiens RFX1-human ENCAB000BCV DNA False 2016-06-23 ENCODE 1 100 ENCFF677RCM, ENCFF807MUK, ENCFF954WVJ 3374914779 ENCODE Processing Pipeline 5b8721a0e900ddd5fa8e86744336c084 https://www.encodeproject.org/files/ENCFF862UZN/@@download/ENCFF862UZN.bam hg19 released low read depth, mild to moderate bottlenecking missing control alignments ENCFF080MNK bam alignments ENCSR041AXL ChIP-seq EFO:0002067 K562 cell line Homo sapiens RFX1-human ENCAB000BCV DNA False 2016-06-23 ENCODE 2 100 ENCFF280GFD, ENCFF807MUK, ENCFF899IKW 3723990459 ENCODE Processing Pipeline 9fe4ba26f81b283d5a7d3c453cec2d26 https://www.encodeproject.org/files/ENCFF080MNK/@@download/ENCFF080MNK.bam hg19 released low read depth, mild to moderate bottlenecking missing control alignments ENCFF302IYD bigWig signal p-value ENCSR041AXL ChIP-seq EFO:0002067 K562 cell line Homo sapiens RFX1-human ENCAB000BCV DNA False 2016-06-23 ENCODE 2 ENCFF051LWI, ENCFF080MNK 867182926 ENCODE Processing Pipeline e225bfebdb63dc580a6ce7e325d5f53b https://www.encodeproject.org/files/ENCFF302IYD/@@download/ENCFF302IYD.bigWig hg19 released low read depth, mild to moderate bottlenecking missing control alignments ENCFF285ZQY bigWig signal p-value ENCSR041AXL ChIP-seq EFO:0002067 K562 cell line Homo sapiens RFX1-human ENCAB000BCV DNA False 2016-06-23 ENCODE 1 ENCFF581ZJL, ENCFF862UZN 1030061078 ENCODE Processing Pipeline 2397458a42dbb0bf236f157f6f5e5647 https://www.encodeproject.org/files/ENCFF285ZQY/@@download/ENCFF285ZQY.bigWig hg19 released low read depth, mild to moderate bottlenecking missing control alignments ENCFF099VJR bigWig signal p-value ENCSR041AXL ChIP-seq EFO:0002067 K562 cell line Homo sapiens RFX1-human ENCAB000BCV DNA False 2016-06-23 ENCODE 1, 2 ENCFF051LWI, ENCFF080MNK, ENCFF581ZJL, ENCFF862UZN 1583882516 ENCODE Processing Pipeline 802c8f1624f7e7f1d7951c3e02d11f2b https://www.encodeproject.org/files/ENCFF099VJR/@@download/ENCFF099VJR.bigWig hg19 released low read depth, mild to moderate bottlenecking missing control alignments ENCFF105MND bigWig fold change over control ENCSR041AXL ChIP-seq EFO:0002067 K562 cell line Homo sapiens RFX1-human ENCAB000BCV DNA False 2016-06-23 ENCODE 1 ENCFF581ZJL, ENCFF862UZN 1068524758 ENCODE Processing Pipeline 1094f7500cf9b66c5c54e3536a249e52 https://www.encodeproject.org/files/ENCFF105MND/@@download/ENCFF105MND.bigWig hg19 released low read depth, mild to moderate bottlenecking missing control alignments ENCFF542RIR bigWig fold change over control ENCSR041AXL ChIP-seq EFO:0002067 K562 cell line Homo sapiens RFX1-human ENCAB000BCV DNA False 2016-06-23 ENCODE 2 ENCFF051LWI, ENCFF080MNK 1011928799 ENCODE Processing Pipeline 8e822e5be119c614bd953244c3082a0d https://www.encodeproject.org/files/ENCFF542RIR/@@download/ENCFF542RIR.bigWig hg19 released low read depth, mild to moderate bottlenecking missing control alignments ENCFF362QFP bigWig fold change over control ENCSR041AXL ChIP-seq EFO:0002067 K562 cell line Homo sapiens RFX1-human ENCAB000BCV DNA False 2016-06-23 ENCODE 1, 2 ENCFF051LWI, ENCFF080MNK, ENCFF581ZJL, ENCFF862UZN 1949928958 ENCODE Processing Pipeline 88d09986152bb765394305215c4673dd https://www.encodeproject.org/files/ENCFF362QFP/@@download/ENCFF362QFP.bigWig hg19 released low read depth, mild to moderate bottlenecking missing control alignments ENCFF008XTO bed narrowPeak peaks ENCSR041AXL ChIP-seq EFO:0002067 K562 cell line Homo sapiens RFX1-human ENCAB000BCV DNA False 2016-06-23 ENCODE 1 ENCFF581ZJL, ENCFF862UZN 6606736 ENCODE Processing Pipeline f35483d19c4445bdeed1b505251a418e https://www.encodeproject.org/files/ENCFF008XTO/@@download/ENCFF008XTO.bed.gz hg19 released low read depth, mild to moderate bottlenecking missing control alignments ENCFF830YCS bed narrowPeak peaks ENCSR041AXL ChIP-seq EFO:0002067 K562 cell line Homo sapiens RFX1-human ENCAB000BCV DNA False 2016-06-23 ENCODE 2 ENCFF051LWI, ENCFF080MNK 6824938 ENCODE Processing Pipeline 1f26fecef2e02649484455fc3cc1772f https://www.encodeproject.org/files/ENCFF830YCS/@@download/ENCFF830YCS.bed.gz hg19 released low read depth, mild to moderate bottlenecking missing control alignments ENCFF811RGP bed narrowPeak peaks ENCSR041AXL ChIP-seq EFO:0002067 K562 cell line Homo sapiens RFX1-human ENCAB000BCV DNA False 2016-06-23 ENCODE 1, 2 ENCFF051LWI, ENCFF080MNK, ENCFF581ZJL, ENCFF862UZN 7183477 ENCODE Processing Pipeline de10bf4b5542e94981e07d5156011e3b https://www.encodeproject.org/files/ENCFF811RGP/@@download/ENCFF811RGP.bed.gz hg19 released low read depth, mild to moderate bottlenecking missing control alignments ENCFF662SYL bigBed narrowPeak peaks ENCSR041AXL ChIP-seq EFO:0002067 K562 cell line Homo sapiens RFX1-human ENCAB000BCV DNA False 2016-06-23 ENCODE 1 ENCFF008XTO 13501824 ENCODE Processing Pipeline 4903d91d9cd1b51773ca13d96cbd38ae https://www.encodeproject.org/files/ENCFF662SYL/@@download/ENCFF662SYL.bigBed hg19 released low read depth, mild to moderate bottlenecking missing control alignments ENCFF872KNP bigBed narrowPeak peaks ENCSR041AXL ChIP-seq EFO:0002067 K562 cell line Homo sapiens RFX1-human ENCAB000BCV DNA False 2016-06-23 ENCODE 1, 2 ENCFF811RGP 13433028 ENCODE Processing Pipeline cdd16aec8aef2671060c7be85360fa59 https://www.encodeproject.org/files/ENCFF872KNP/@@download/ENCFF872KNP.bigBed hg19 released low read depth, mild to moderate bottlenecking missing control alignments ENCFF857XZI bigBed narrowPeak peaks ENCSR041AXL ChIP-seq EFO:0002067 K562 cell line Homo sapiens RFX1-human ENCAB000BCV DNA False 2016-06-23 ENCODE 2 ENCFF830YCS 13432599 ENCODE Processing Pipeline 85a7ff28e3eb335edc2902381187aa6a https://www.encodeproject.org/files/ENCFF857XZI/@@download/ENCFF857XZI.bigBed hg19 released low read depth, mild to moderate bottlenecking missing control alignments ENCFF340YYY bam unfiltered alignments ENCSR041AXL ChIP-seq EFO:0002067 K562 cell line Homo sapiens RFX1-human ENCAB000BCV DNA False 2016-06-23 ENCODE 1 100 ENCFF643CGH, ENCFF677RCM, ENCFF954WVJ 4209807152 ENCODE Processing Pipeline 9f540dcd8d18d59e18c10efdf7bee0ac https://www.encodeproject.org/files/ENCFF340YYY/@@download/ENCFF340YYY.bam GRCh38 released low read depth, mild to moderate bottlenecking missing control alignments ENCFF836CNG bam unfiltered alignments ENCSR041AXL ChIP-seq EFO:0002067 K562 cell line Homo sapiens RFX1-human ENCAB000BCV DNA False 2016-06-23 ENCODE 2 100 ENCFF280GFD, ENCFF643CGH, ENCFF899IKW 4715185946 ENCODE Processing Pipeline f994ecaf2e1f4630e7dc0f9453453631 https://www.encodeproject.org/files/ENCFF836CNG/@@download/ENCFF836CNG.bam GRCh38 released low read depth, mild to moderate bottlenecking missing control alignments ENCFF871KNP bam alignments ENCSR041AXL ChIP-seq EFO:0002067 K562 cell line Homo sapiens RFX1-human ENCAB000BCV DNA False 2016-06-23 ENCODE 1 100 ENCFF643CGH, ENCFF677RCM, ENCFF954WVJ 3377392964 ENCODE Processing Pipeline 6cad181803020a000048d63c8b07b988 https://www.encodeproject.org/files/ENCFF871KNP/@@download/ENCFF871KNP.bam GRCh38 released low read depth, mild to moderate bottlenecking missing control alignments ENCFF490ICL bam alignments ENCSR041AXL ChIP-seq EFO:0002067 K562 cell line Homo sapiens RFX1-human ENCAB000BCV DNA False 2016-06-23 ENCODE 2 100 ENCFF280GFD, ENCFF643CGH, ENCFF899IKW 3726758860 ENCODE Processing Pipeline 847be0d9056301bb4fd01eab5589ef2a https://www.encodeproject.org/files/ENCFF490ICL/@@download/ENCFF490ICL.bam GRCh38 released low read depth, mild to moderate bottlenecking missing control alignments ENCFF305GHX bigWig signal p-value ENCSR041AXL ChIP-seq EFO:0002067 K562 cell line Homo sapiens RFX1-human ENCAB000BCV DNA False 2016-06-23 ENCODE 1 ENCFF871KNP 1067207971 ENCODE Processing Pipeline f471f33df65cf6ee002b352683076ef5 https://www.encodeproject.org/files/ENCFF305GHX/@@download/ENCFF305GHX.bigWig GRCh38 released low read depth, mild to moderate bottlenecking missing control alignments ENCFF694VNO bigWig signal p-value ENCSR041AXL ChIP-seq EFO:0002067 K562 cell line Homo sapiens RFX1-human ENCAB000BCV DNA False 2016-06-23 ENCODE 2 ENCFF490ICL 891134259 ENCODE Processing Pipeline f36e0c98b91911aee850d1c5d8eabdd7 https://www.encodeproject.org/files/ENCFF694VNO/@@download/ENCFF694VNO.bigWig GRCh38 released low read depth, mild to moderate bottlenecking missing control alignments ENCFF992RWH bigWig signal p-value ENCSR041AXL ChIP-seq EFO:0002067 K562 cell line Homo sapiens RFX1-human ENCAB000BCV DNA False 2016-06-23 ENCODE 1, 2 ENCFF490ICL, ENCFF871KNP 1837000027 ENCODE Processing Pipeline 54106f2fc6c72eba4537a739c14628b1 https://www.encodeproject.org/files/ENCFF992RWH/@@download/ENCFF992RWH.bigWig GRCh38 released low read depth, mild to moderate bottlenecking missing control alignments ENCFF313LZB bigWig fold change over control ENCSR041AXL ChIP-seq EFO:0002067 K562 cell line Homo sapiens RFX1-human ENCAB000BCV DNA False 2016-06-23 ENCODE 1 ENCFF871KNP 1062957234 ENCODE Processing Pipeline 97782fe101cf1b2cd2d8dd773613bb9a https://www.encodeproject.org/files/ENCFF313LZB/@@download/ENCFF313LZB.bigWig GRCh38 released low read depth, mild to moderate bottlenecking missing control alignments ENCFF270RBT bigWig fold change over control ENCSR041AXL ChIP-seq EFO:0002067 K562 cell line Homo sapiens RFX1-human ENCAB000BCV DNA False 2016-06-23 ENCODE 2 ENCFF490ICL 1012677811 ENCODE Processing Pipeline dc984120c924c7dc7b7e3433c32b2c70 https://www.encodeproject.org/files/ENCFF270RBT/@@download/ENCFF270RBT.bigWig GRCh38 released low read depth, mild to moderate bottlenecking missing control alignments ENCFF931NXG bigWig fold change over control ENCSR041AXL ChIP-seq EFO:0002067 K562 cell line Homo sapiens RFX1-human ENCAB000BCV DNA False 2016-06-23 ENCODE 1, 2 ENCFF490ICL, ENCFF871KNP 1938422483 ENCODE Processing Pipeline cee0982c4ed4eb7273f55087fdabb4aa https://www.encodeproject.org/files/ENCFF931NXG/@@download/ENCFF931NXG.bigWig GRCh38 released low read depth, mild to moderate bottlenecking missing control alignments ENCFF097OOH bed narrowPeak peaks ENCSR041AXL ChIP-seq EFO:0002067 K562 cell line Homo sapiens RFX1-human ENCAB000BCV DNA False 2016-06-23 ENCODE 1 ENCFF871KNP 6498924 ENCODE Processing Pipeline cf88dee06d156cccad7e33a003b5c7b0 https://www.encodeproject.org/files/ENCFF097OOH/@@download/ENCFF097OOH.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking missing control alignments ENCFF276DDZ bed narrowPeak peaks ENCSR041AXL ChIP-seq EFO:0002067 K562 cell line Homo sapiens RFX1-human ENCAB000BCV DNA False 2016-06-23 ENCODE 2 ENCFF490ICL 6693668 ENCODE Processing Pipeline 0f21f5e7ff1602801567634053e61590 https://www.encodeproject.org/files/ENCFF276DDZ/@@download/ENCFF276DDZ.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking missing control alignments ENCFF477XNB bigBed narrowPeak peaks ENCSR041AXL ChIP-seq EFO:0002067 K562 cell line Homo sapiens RFX1-human ENCAB000BCV DNA False 2016-06-23 ENCODE 1 ENCFF097OOH 13538337 ENCODE Processing Pipeline acc7772613c0377ed70b7b29b01f0a60 https://www.encodeproject.org/files/ENCFF477XNB/@@download/ENCFF477XNB.bigBed GRCh38 released low read depth, mild to moderate bottlenecking missing control alignments ENCFF155AMX bigBed narrowPeak peaks ENCSR041AXL ChIP-seq EFO:0002067 K562 cell line Homo sapiens RFX1-human ENCAB000BCV DNA False 2016-06-23 ENCODE 2 ENCFF276DDZ 13422087 ENCODE Processing Pipeline 73483922b3a0d42726d82fc72a1526c4 https://www.encodeproject.org/files/ENCFF155AMX/@@download/ENCFF155AMX.bigBed GRCh38 released low read depth, mild to moderate bottlenecking missing control alignments ENCFF482TTM bed narrowPeak peaks ENCSR041AXL ChIP-seq EFO:0002067 K562 cell line Homo sapiens RFX1-human ENCAB000BCV DNA False 2016-06-23 ENCODE 1, 2 ENCFF490ICL, ENCFF871KNP 7156825 ENCODE Processing Pipeline 9fa2a5ce4ce8c130036e12dd24f8d1c6 https://www.encodeproject.org/files/ENCFF482TTM/@@download/ENCFF482TTM.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking missing control alignments ENCFF380PBE bigBed narrowPeak peaks ENCSR041AXL ChIP-seq EFO:0002067 K562 cell line Homo sapiens RFX1-human ENCAB000BCV DNA False 2016-06-23 ENCODE 1, 2 ENCFF482TTM 13447870 ENCODE Processing Pipeline efb466c29b1167c9704db674cfc5c1d5 https://www.encodeproject.org/files/ENCFF380PBE/@@download/ENCFF380PBE.bigBed GRCh38 released low read depth, mild to moderate bottlenecking missing control alignments ENCFF951EDR bed narrowPeak conservative idr thresholded peaks ENCSR041AXL ChIP-seq EFO:0002067 K562 cell line Homo sapiens RFX1-human ENCAB000BCV DNA False 2016-06-23 ENCODE 1, 2 ENCFF097OOH, ENCFF276DDZ, ENCFF419RSJ, ENCFF482TTM 312211 ENCODE Processing Pipeline def0445013b104e6d0cb84dfd757c1c3 https://www.encodeproject.org/files/ENCFF951EDR/@@download/ENCFF951EDR.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking missing control alignments ENCFF073SVU bigBed narrowPeak optimal idr thresholded peaks ENCSR041AXL ChIP-seq EFO:0002067 K562 cell line Homo sapiens RFX1-human ENCAB000BCV DNA False 2016-06-23 ENCODE 1, 2 ENCFF905GXS 651504 ENCODE Processing Pipeline 75317dad1023750131b4671bb9651fbd https://www.encodeproject.org/files/ENCFF073SVU/@@download/ENCFF073SVU.bigBed GRCh38 released low read depth, mild to moderate bottlenecking missing control alignments ENCFF841XZB bigBed narrowPeak conservative idr thresholded peaks ENCSR041AXL ChIP-seq EFO:0002067 K562 cell line Homo sapiens RFX1-human ENCAB000BCV DNA False 2016-06-23 ENCODE 1, 2 ENCFF951EDR 616627 ENCODE Processing Pipeline 02f32c7e35c200148f6d6671744bbebd https://www.encodeproject.org/files/ENCFF841XZB/@@download/ENCFF841XZB.bigBed GRCh38 released low read depth, mild to moderate bottlenecking missing control alignments ENCFF905GXS bed narrowPeak optimal idr thresholded peaks ENCSR041AXL ChIP-seq EFO:0002067 K562 cell line Homo sapiens RFX1-human ENCAB000BCV DNA False 2016-06-23 ENCODE 1, 2 ENCFF097OOH, ENCFF276DDZ, ENCFF419RSJ, ENCFF482TTM 336627 ENCODE Processing Pipeline f9cf1c77884bac03869a5b8f336e1ac2 https://www.encodeproject.org/files/ENCFF905GXS/@@download/ENCFF905GXS.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking missing control alignments ENCFF934JXG bed narrowPeak conservative idr thresholded peaks ENCSR041AXL ChIP-seq EFO:0002067 K562 cell line Homo sapiens RFX1-human ENCAB000BCV DNA False 2016-06-23 ENCODE 1, 2 ENCFF001TDO, ENCFF008XTO, ENCFF811RGP, ENCFF830YCS 275981 ENCODE Processing Pipeline cccc8f6c4b7f9ac00b6a7c6dd18431df https://www.encodeproject.org/files/ENCFF934JXG/@@download/ENCFF934JXG.bed.gz hg19 released low read depth, mild to moderate bottlenecking missing control alignments ENCFF164HUB bigBed narrowPeak conservative idr thresholded peaks ENCSR041AXL ChIP-seq EFO:0002067 K562 cell line Homo sapiens RFX1-human ENCAB000BCV DNA False 2016-06-23 ENCODE 1, 2 ENCFF934JXG 564810 ENCODE Processing Pipeline 43f91fd1aa91079c9edcc783e965baae https://www.encodeproject.org/files/ENCFF164HUB/@@download/ENCFF164HUB.bigBed hg19 released low read depth, mild to moderate bottlenecking missing control alignments ENCFF237UAN bed narrowPeak optimal idr thresholded peaks ENCSR041AXL ChIP-seq EFO:0002067 K562 cell line Homo sapiens RFX1-human ENCAB000BCV DNA False 2016-06-23 ENCODE 1, 2 ENCFF001TDO, ENCFF008XTO, ENCFF811RGP, ENCFF830YCS 297362 ENCODE Processing Pipeline cf2d85601c8811ad39574a73908395c8 https://www.encodeproject.org/files/ENCFF237UAN/@@download/ENCFF237UAN.bed.gz hg19 released low read depth, mild to moderate bottlenecking missing control alignments ENCFF849DJZ bigBed narrowPeak optimal idr thresholded peaks ENCSR041AXL ChIP-seq EFO:0002067 K562 cell line Homo sapiens RFX1-human ENCAB000BCV DNA False 2016-06-23 ENCODE 1, 2 ENCFF237UAN 593370 ENCODE Processing Pipeline 64653562c38789f03fc701266c080537 https://www.encodeproject.org/files/ENCFF849DJZ/@@download/ENCFF849DJZ.bigBed hg19 released low read depth, mild to moderate bottlenecking missing control alignments ENCFF232KYF bam unfiltered alignments ENCSR158RYZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZBTB40-human ENCAB728YTO DNA False 2017-12-01 ENCODE 4 50 ENCFF166AWJ, ENCFF358JWM, ENCFF807MUK 1703538761 ENCODE Processing Pipeline f12505ac73c0c94ace0d628574bf2dc4 https://www.encodeproject.org/files/ENCFF232KYF/@@download/ENCFF232KYF.bam hg19 released control low read depth, borderline replicate concordance, missing genetic modification characterization experiment not submitted to GEO ENCFF394VMG bam unfiltered alignments ENCSR158RYZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZBTB40-human ENCAB728YTO DNA False 2017-12-01 ENCODE 3 50 ENCFF180XGO, ENCFF807MUK, ENCFF988NSQ 1390494117 ENCODE Processing Pipeline aca5ea2c05c586e55a562890e21dd85f https://www.encodeproject.org/files/ENCFF394VMG/@@download/ENCFF394VMG.bam hg19 released control low read depth, borderline replicate concordance, missing genetic modification characterization experiment not submitted to GEO ENCFF709ELM fastq reads ENCSR158RYZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZBTB40-human ENCAB728YTO DNA False 2017-12-01 ENCODE 1 1 50 single-ended 628010529 Kevin White, UChicago 890c2d4bd318a9047e4f7a625f67e4da https://www.encodeproject.org/files/ENCFF709ELM/@@download/ENCFF709ELM.fastq.gz Illumina HiSeq 2500 /files/ENCFF748FSB/ archived control low read depth, borderline replicate concordance, missing genetic modification characterization experiment not submitted to GEO ENCFF988NSQ fastq reads ENCSR158RYZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZBTB40-human ENCAB728YTO DNA False 2017-12-01 ENCODE 3 1 50 single-ended 489989848 Kevin White, UChicago 0d31fcd66a4c42d7d4b05e575c69cd09 https://www.encodeproject.org/files/ENCFF988NSQ/@@download/ENCFF988NSQ.fastq.gz Illumina HiSeq 2500 /files/ENCFF748FSB/ released control low read depth, borderline replicate concordance, missing genetic modification characterization experiment not submitted to GEO ENCFF358JWM fastq reads ENCSR158RYZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZBTB40-human ENCAB728YTO DNA False 2017-12-01 ENCODE 4 1 50 single-ended 707041578 Kevin White, UChicago 99378c852c5be68251cbb125ffcf045a https://www.encodeproject.org/files/ENCFF358JWM/@@download/ENCFF358JWM.fastq.gz Illumina HiSeq 2500 /files/ENCFF748FSB/ released control low read depth, borderline replicate concordance, missing genetic modification characterization experiment not submitted to GEO ENCFF190YEE fastq reads ENCSR158RYZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZBTB40-human ENCAB728YTO DNA False 2017-12-01 ENCODE 1 1 50 single-ended 108278353 Kevin White, UChicago edf676c91938682a87f230b147c17b01 https://www.encodeproject.org/files/ENCFF190YEE/@@download/ENCFF190YEE.fastq.gz Illumina HiSeq 2000 /files/ENCFF748FSB/ archived control low read depth, borderline replicate concordance, missing genetic modification characterization experiment not submitted to GEO ENCFF166AWJ fastq reads ENCSR158RYZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZBTB40-human ENCAB728YTO DNA False 2017-12-01 ENCODE 4 1 50 single-ended 877858005 Kevin White, UChicago 4c846c1bbc508e485270559171f3d9f1 https://www.encodeproject.org/files/ENCFF166AWJ/@@download/ENCFF166AWJ.fastq.gz Illumina HiSeq 2500 /files/ENCFF748FSB/ released control low read depth, borderline replicate concordance, missing genetic modification characterization experiment not submitted to GEO ENCFF180XGO fastq reads ENCSR158RYZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZBTB40-human ENCAB728YTO DNA False 2017-12-01 ENCODE 3 1 50 single-ended 764616332 Kevin White, UChicago 5cb65fe771f4615784d8211982cc93f6 https://www.encodeproject.org/files/ENCFF180XGO/@@download/ENCFF180XGO.fastq.gz Illumina HiSeq 2500 /files/ENCFF748FSB/ released control low read depth, borderline replicate concordance, missing genetic modification characterization experiment not submitted to GEO ENCFF974GMB bam alignments ENCSR158RYZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZBTB40-human ENCAB728YTO DNA False 2017-12-01 ENCODE 1 ENCFF190YEE, ENCFF709ELM, ENCFF807MUK 608932959 ENCODE Processing Pipeline 136e501c4bacf4aab87debab20d76648 https://www.encodeproject.org/files/ENCFF974GMB/@@download/ENCFF974GMB.bam hg19 archived control low read depth, borderline replicate concordance, missing genetic modification characterization experiment not submitted to GEO ENCFF380DQS bam alignments ENCSR158RYZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZBTB40-human ENCAB728YTO DNA False 2017-12-01 ENCODE 3 ENCFF180XGO, ENCFF807MUK, ENCFF988NSQ 1076891192 ENCODE Processing Pipeline 4536f8285bdeb1de706beabc4213f491 https://www.encodeproject.org/files/ENCFF380DQS/@@download/ENCFF380DQS.bam hg19 released control low read depth, borderline replicate concordance, missing genetic modification characterization experiment not submitted to GEO ENCFF487EDR bam alignments ENCSR158RYZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZBTB40-human ENCAB728YTO DNA False 2017-12-01 ENCODE 4 ENCFF166AWJ, ENCFF358JWM, ENCFF807MUK 1290696666 ENCODE Processing Pipeline 356c38ae1f7b804628d0a3bf9a0c7065 https://www.encodeproject.org/files/ENCFF487EDR/@@download/ENCFF487EDR.bam hg19 released control low read depth, borderline replicate concordance, missing genetic modification characterization experiment not submitted to GEO ENCFF186QYY bam unfiltered alignments ENCSR158RYZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZBTB40-human ENCAB728YTO DNA False 2017-12-01 ENCODE 3 50 ENCFF180XGO, ENCFF643CGH, ENCFF988NSQ 1396107613 ENCODE Processing Pipeline 5f5e5136e81623501b76b3e1adfd29d3 https://www.encodeproject.org/files/ENCFF186QYY/@@download/ENCFF186QYY.bam GRCh38 released control low read depth, borderline replicate concordance, missing genetic modification characterization experiment not submitted to GEO ENCFF155JVO bam alignments ENCSR158RYZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZBTB40-human ENCAB728YTO DNA False 2017-12-01 ENCODE 3 50 ENCFF180XGO, ENCFF643CGH, ENCFF988NSQ 1076302557 ENCODE Processing Pipeline bb5a62d5b1f0a6c6063994c0765a3e12 https://www.encodeproject.org/files/ENCFF155JVO/@@download/ENCFF155JVO.bam GRCh38 released control low read depth, borderline replicate concordance, missing genetic modification characterization experiment not submitted to GEO ENCFF771AMR bam unfiltered alignments ENCSR158RYZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZBTB40-human ENCAB728YTO DNA False 2017-12-01 ENCODE 4 50 ENCFF166AWJ, ENCFF358JWM, ENCFF643CGH 1709358249 ENCODE Processing Pipeline 559240e3355a3dc9291c4ff2127758b8 https://www.encodeproject.org/files/ENCFF771AMR/@@download/ENCFF771AMR.bam GRCh38 released control low read depth, borderline replicate concordance, missing genetic modification characterization experiment not submitted to GEO ENCFF438XHU bam alignments ENCSR158RYZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZBTB40-human ENCAB728YTO DNA False 2017-12-01 ENCODE 4 50 ENCFF166AWJ, ENCFF358JWM, ENCFF643CGH 1289945267 ENCODE Processing Pipeline 244d6b19a8443bb3da93092846d2a888 https://www.encodeproject.org/files/ENCFF438XHU/@@download/ENCFF438XHU.bam GRCh38 released control low read depth, borderline replicate concordance, missing genetic modification characterization experiment not submitted to GEO ENCFF926HZQ bigWig signal p-value ENCSR158RYZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZBTB40-human ENCAB728YTO DNA False 2017-12-01 ENCODE 3, 4 ENCFF266BSJ, ENCFF380DQS, ENCFF487EDR 455498361 ENCODE Processing Pipeline cbb1fa8ec1f8afd71f5d1a42d6810759 https://www.encodeproject.org/files/ENCFF926HZQ/@@download/ENCFF926HZQ.bigWig hg19 released control low read depth, borderline replicate concordance, missing genetic modification characterization experiment not submitted to GEO ENCFF516GMY bigWig signal p-value ENCSR158RYZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZBTB40-human ENCAB728YTO DNA False 2017-12-01 ENCODE 4 ENCFF266BSJ, ENCFF487EDR 478465425 ENCODE Processing Pipeline 75eb198b46ef49f08cf20f8aff086d8a https://www.encodeproject.org/files/ENCFF516GMY/@@download/ENCFF516GMY.bigWig hg19 released control low read depth, borderline replicate concordance, missing genetic modification characterization experiment not submitted to GEO ENCFF432AZP bigBed narrowPeak peaks ENCSR158RYZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZBTB40-human ENCAB728YTO DNA False 2017-12-01 ENCODE 3 ENCFF016RIL 13162872 ENCODE Processing Pipeline 88f3e1cb43061a366d492235faca44cd https://www.encodeproject.org/files/ENCFF432AZP/@@download/ENCFF432AZP.bigBed hg19 released control low read depth, borderline replicate concordance, missing genetic modification characterization experiment not submitted to GEO ENCFF561XVS bigWig fold change over control ENCSR158RYZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZBTB40-human ENCAB728YTO DNA False 2017-12-01 ENCODE 3, 4 ENCFF266BSJ, ENCFF380DQS, ENCFF487EDR 816822398 ENCODE Processing Pipeline 10ae26406fc76cd3c8a4f83c4a84f807 https://www.encodeproject.org/files/ENCFF561XVS/@@download/ENCFF561XVS.bigWig hg19 released control low read depth, borderline replicate concordance, missing genetic modification characterization experiment not submitted to GEO ENCFF387NJK bigBed narrowPeak peaks ENCSR158RYZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZBTB40-human ENCAB728YTO DNA False 2017-12-01 ENCODE 4 ENCFF997KYE 12956928 ENCODE Processing Pipeline 032c5e7829defd7540fa986b5090c341 https://www.encodeproject.org/files/ENCFF387NJK/@@download/ENCFF387NJK.bigBed hg19 released control low read depth, borderline replicate concordance, missing genetic modification characterization experiment not submitted to GEO ENCFF649BGQ bigWig fold change over control ENCSR158RYZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZBTB40-human ENCAB728YTO DNA False 2017-12-01 ENCODE 3 ENCFF266BSJ, ENCFF380DQS 477846658 ENCODE Processing Pipeline 74b60e22aedde5cee9d24095e1791e58 https://www.encodeproject.org/files/ENCFF649BGQ/@@download/ENCFF649BGQ.bigWig hg19 released control low read depth, borderline replicate concordance, missing genetic modification characterization experiment not submitted to GEO ENCFF986DSB bigBed narrowPeak conservative idr thresholded peaks ENCSR158RYZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZBTB40-human ENCAB728YTO DNA False 2017-12-01 ENCODE 3, 4 ENCFF413TRG 577007 ENCODE Processing Pipeline 303c3847277943d8515184d316cbfd7e https://www.encodeproject.org/files/ENCFF986DSB/@@download/ENCFF986DSB.bigBed hg19 released control low read depth, borderline replicate concordance, missing genetic modification characterization experiment not submitted to GEO ENCFF016GDI bigWig fold change over control ENCSR158RYZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZBTB40-human ENCAB728YTO DNA False 2017-12-01 ENCODE 4 ENCFF266BSJ, ENCFF487EDR 558392191 ENCODE Processing Pipeline 7009e18c6822631a63de895572316a76 https://www.encodeproject.org/files/ENCFF016GDI/@@download/ENCFF016GDI.bigWig hg19 released control low read depth, borderline replicate concordance, missing genetic modification characterization experiment not submitted to GEO ENCFF097BNT bigBed narrowPeak peaks ENCSR158RYZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZBTB40-human ENCAB728YTO DNA False 2017-12-01 ENCODE 3, 4 ENCFF696LOS 12999859 ENCODE Processing Pipeline 9f71b25482007394202c03fa8d7bbabc https://www.encodeproject.org/files/ENCFF097BNT/@@download/ENCFF097BNT.bigBed hg19 released control low read depth, borderline replicate concordance, missing genetic modification characterization experiment not submitted to GEO ENCFF413TRG bed narrowPeak conservative idr thresholded peaks ENCSR158RYZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZBTB40-human ENCAB728YTO DNA False 2017-12-01 ENCODE 3, 4 ENCFF001TDO, ENCFF016RIL, ENCFF696LOS, ENCFF997KYE 261997 ENCODE Processing Pipeline af10f3d0b988f3db5bedc64c65a34cc2 https://www.encodeproject.org/files/ENCFF413TRG/@@download/ENCFF413TRG.bed.gz hg19 released control low read depth, borderline replicate concordance, missing genetic modification characterization experiment not submitted to GEO ENCFF995IAC bed narrowPeak optimal idr thresholded peaks ENCSR158RYZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZBTB40-human ENCAB728YTO DNA False 2017-12-01 ENCODE 3, 4 ENCFF001TDO, ENCFF016RIL, ENCFF696LOS, ENCFF997KYE 350377 ENCODE Processing Pipeline 5fc18b2a8f2ddbf62a95eb4350681ef0 https://www.encodeproject.org/files/ENCFF995IAC/@@download/ENCFF995IAC.bed.gz hg19 released control low read depth, borderline replicate concordance, missing genetic modification characterization experiment not submitted to GEO ENCFF012RUC bigWig signal p-value ENCSR158RYZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZBTB40-human ENCAB728YTO DNA False 2017-12-01 ENCODE 3 ENCFF266BSJ, ENCFF380DQS 468609675 ENCODE Processing Pipeline f170022129afd006417d32bf6ff9ab21 https://www.encodeproject.org/files/ENCFF012RUC/@@download/ENCFF012RUC.bigWig hg19 released control low read depth, borderline replicate concordance, missing genetic modification characterization experiment not submitted to GEO ENCFF997KYE bed narrowPeak peaks ENCSR158RYZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZBTB40-human ENCAB728YTO DNA False 2017-12-01 ENCODE 4 ENCFF266BSJ, ENCFF487EDR 6453669 ENCODE Processing Pipeline ce6afeb7bed75e0c3e91c7bc06053b62 https://www.encodeproject.org/files/ENCFF997KYE/@@download/ENCFF997KYE.bed.gz hg19 released control low read depth, borderline replicate concordance, missing genetic modification characterization experiment not submitted to GEO ENCFF696LOS bed narrowPeak peaks ENCSR158RYZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZBTB40-human ENCAB728YTO DNA False 2017-12-01 ENCODE 3, 4 ENCFF266BSJ, ENCFF380DQS, ENCFF487EDR 6805260 ENCODE Processing Pipeline bb0f0ea1b5ef316ba97bab1890dd653d https://www.encodeproject.org/files/ENCFF696LOS/@@download/ENCFF696LOS.bed.gz hg19 released control low read depth, borderline replicate concordance, missing genetic modification characterization experiment not submitted to GEO ENCFF841JIB bigBed narrowPeak optimal idr thresholded peaks ENCSR158RYZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZBTB40-human ENCAB728YTO DNA False 2017-12-01 ENCODE 3, 4 ENCFF995IAC 713169 ENCODE Processing Pipeline c05f5a9de27e14cee26f4579f4679233 https://www.encodeproject.org/files/ENCFF841JIB/@@download/ENCFF841JIB.bigBed hg19 released control low read depth, borderline replicate concordance, missing genetic modification characterization experiment not submitted to GEO ENCFF016RIL bed narrowPeak peaks ENCSR158RYZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZBTB40-human ENCAB728YTO DNA False 2017-12-01 ENCODE 3 ENCFF266BSJ, ENCFF380DQS 5528435 ENCODE Processing Pipeline fdf6f45287ff29286dd7035ff27beeae https://www.encodeproject.org/files/ENCFF016RIL/@@download/ENCFF016RIL.bed.gz hg19 released control low read depth, borderline replicate concordance, missing genetic modification characterization experiment not submitted to GEO ENCFF582ZTK bigWig signal p-value ENCSR158RYZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZBTB40-human ENCAB728YTO DNA False 2017-12-01 ENCODE 3 ENCFF155JVO, ENCFF758WOL 472479215 ENCODE Processing Pipeline 7733b9d31587a42bf1b58327b6a5daed https://www.encodeproject.org/files/ENCFF582ZTK/@@download/ENCFF582ZTK.bigWig GRCh38 released control low read depth, borderline replicate concordance, missing genetic modification characterization experiment not submitted to GEO ENCFF838GNT bigWig signal p-value ENCSR158RYZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZBTB40-human ENCAB728YTO DNA False 2017-12-01 ENCODE 4 ENCFF438XHU, ENCFF758WOL 466855115 ENCODE Processing Pipeline 64cd36da58d2ddbb9a046430ab27d6c9 https://www.encodeproject.org/files/ENCFF838GNT/@@download/ENCFF838GNT.bigWig GRCh38 released control low read depth, borderline replicate concordance, missing genetic modification characterization experiment not submitted to GEO ENCFF294ORX bigWig signal p-value ENCSR158RYZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZBTB40-human ENCAB728YTO DNA False 2017-12-01 ENCODE 3, 4 ENCFF155JVO, ENCFF438XHU, ENCFF758WOL 455218034 ENCODE Processing Pipeline 6d6c90aa95582e478c5e0573a5430624 https://www.encodeproject.org/files/ENCFF294ORX/@@download/ENCFF294ORX.bigWig GRCh38 released control low read depth, borderline replicate concordance, missing genetic modification characterization experiment not submitted to GEO ENCFF677CTQ bigBed narrowPeak peaks ENCSR158RYZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZBTB40-human ENCAB728YTO DNA False 2017-12-01 ENCODE 4 ENCFF209DCT 12971105 ENCODE Processing Pipeline 9cd0d8ef1feeca8b5c948a1338b6d4e6 https://www.encodeproject.org/files/ENCFF677CTQ/@@download/ENCFF677CTQ.bigBed GRCh38 released control low read depth, borderline replicate concordance, missing genetic modification characterization experiment not submitted to GEO ENCFF318MYB bigWig fold change over control ENCSR158RYZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZBTB40-human ENCAB728YTO DNA False 2017-12-01 ENCODE 4 ENCFF438XHU, ENCFF758WOL 544567244 ENCODE Processing Pipeline 83e32180bc8dd26c321bc01a01744b51 https://www.encodeproject.org/files/ENCFF318MYB/@@download/ENCFF318MYB.bigWig GRCh38 released control low read depth, borderline replicate concordance, missing genetic modification characterization experiment not submitted to GEO ENCFF836TFW bigWig fold change over control ENCSR158RYZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZBTB40-human ENCAB728YTO DNA False 2017-12-01 ENCODE 3, 4 ENCFF155JVO, ENCFF438XHU, ENCFF758WOL 819023580 ENCODE Processing Pipeline 0c04d3cb5bbc99dae73204ea3faf5606 https://www.encodeproject.org/files/ENCFF836TFW/@@download/ENCFF836TFW.bigWig GRCh38 released control low read depth, borderline replicate concordance, missing genetic modification characterization experiment not submitted to GEO ENCFF729WVO bed narrowPeak peaks ENCSR158RYZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZBTB40-human ENCAB728YTO DNA False 2017-12-01 ENCODE 3 ENCFF155JVO, ENCFF758WOL 5547122 ENCODE Processing Pipeline f0154bf48b12a98da61fc7e72555a31c https://www.encodeproject.org/files/ENCFF729WVO/@@download/ENCFF729WVO.bed.gz GRCh38 released control low read depth, borderline replicate concordance, missing genetic modification characterization experiment not submitted to GEO ENCFF209DCT bed narrowPeak peaks ENCSR158RYZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZBTB40-human ENCAB728YTO DNA False 2017-12-01 ENCODE 4 ENCFF438XHU, ENCFF758WOL 6459159 ENCODE Processing Pipeline 15b7b4abf47d2f2d62e978db719ae45f https://www.encodeproject.org/files/ENCFF209DCT/@@download/ENCFF209DCT.bed.gz GRCh38 released control low read depth, borderline replicate concordance, missing genetic modification characterization experiment not submitted to GEO ENCFF621AHM bigWig fold change over control ENCSR158RYZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZBTB40-human ENCAB728YTO DNA False 2017-12-01 ENCODE 3 ENCFF155JVO, ENCFF758WOL 484682223 ENCODE Processing Pipeline 6c26870024b88fc724a96ffd9adedd15 https://www.encodeproject.org/files/ENCFF621AHM/@@download/ENCFF621AHM.bigWig GRCh38 released control low read depth, borderline replicate concordance, missing genetic modification characterization experiment not submitted to GEO ENCFF845EPR bigBed narrowPeak peaks ENCSR158RYZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZBTB40-human ENCAB728YTO DNA False 2017-12-01 ENCODE 3 ENCFF729WVO 13173331 ENCODE Processing Pipeline a9a9105c3adff1aabfb120d57d658724 https://www.encodeproject.org/files/ENCFF845EPR/@@download/ENCFF845EPR.bigBed GRCh38 released control low read depth, borderline replicate concordance, missing genetic modification characterization experiment not submitted to GEO ENCFF584XHJ bigBed narrowPeak peaks ENCSR158RYZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZBTB40-human ENCAB728YTO DNA False 2017-12-01 ENCODE 3, 4 ENCFF291TTY 13006297 ENCODE Processing Pipeline 65eccbdd48619f1f98be587cf596a048 https://www.encodeproject.org/files/ENCFF584XHJ/@@download/ENCFF584XHJ.bigBed GRCh38 released control low read depth, borderline replicate concordance, missing genetic modification characterization experiment not submitted to GEO ENCFF545JMF bigBed narrowPeak conservative idr thresholded peaks ENCSR158RYZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZBTB40-human ENCAB728YTO DNA False 2017-12-01 ENCODE 3, 4 ENCFF619KPM 582299 ENCODE Processing Pipeline 0a21dfd73c8dab11f3e9cd802442e32f https://www.encodeproject.org/files/ENCFF545JMF/@@download/ENCFF545JMF.bigBed GRCh38 released control low read depth, borderline replicate concordance, missing genetic modification characterization experiment not submitted to GEO ENCFF291TTY bed narrowPeak peaks ENCSR158RYZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZBTB40-human ENCAB728YTO DNA False 2017-12-01 ENCODE 3, 4 ENCFF155JVO, ENCFF438XHU, ENCFF758WOL 6806385 ENCODE Processing Pipeline bb8caddea29d6c5fa06ec0bba16ad8bb https://www.encodeproject.org/files/ENCFF291TTY/@@download/ENCFF291TTY.bed.gz GRCh38 released control low read depth, borderline replicate concordance, missing genetic modification characterization experiment not submitted to GEO ENCFF619KPM bed narrowPeak conservative idr thresholded peaks ENCSR158RYZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZBTB40-human ENCAB728YTO DNA False 2017-12-01 ENCODE 3, 4 ENCFF209DCT, ENCFF291TTY, ENCFF419RSJ, ENCFF729WVO 265211 ENCODE Processing Pipeline f4524e62d2597d5001b12db2c76c47d9 https://www.encodeproject.org/files/ENCFF619KPM/@@download/ENCFF619KPM.bed.gz GRCh38 released control low read depth, borderline replicate concordance, missing genetic modification characterization experiment not submitted to GEO ENCFF312NVO bed narrowPeak optimal idr thresholded peaks ENCSR158RYZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZBTB40-human ENCAB728YTO DNA False 2017-12-01 ENCODE 3, 4 ENCFF209DCT, ENCFF291TTY, ENCFF419RSJ, ENCFF729WVO 357551 ENCODE Processing Pipeline c2cf5f805de40ee8d34fd1f833b9c9ba https://www.encodeproject.org/files/ENCFF312NVO/@@download/ENCFF312NVO.bed.gz GRCh38 released control low read depth, borderline replicate concordance, missing genetic modification characterization experiment not submitted to GEO ENCFF892NKM bigBed narrowPeak optimal idr thresholded peaks ENCSR158RYZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZBTB40-human ENCAB728YTO DNA False 2017-12-01 ENCODE 3, 4 ENCFF312NVO 724848 ENCODE Processing Pipeline 15f55699eaded9732b69abe058d12635 https://www.encodeproject.org/files/ENCFF892NKM/@@download/ENCFF892NKM.bigBed GRCh38 released control low read depth, borderline replicate concordance, missing genetic modification characterization experiment not submitted to GEO ENCFF000QHI bigBed broadPeak peaks ENCSR000BRR ChIP-seq EFO:0002067 K562 cell line Homo sapiens STAT5A-human ENCAB000ALI DNA see document see document False 2012-02-29 ENCODE 1 1 ENCFF001ULL 429738 Richard Myers, HAIB f9536abec6c1132b6776373996d03954 https://www.encodeproject.org/files/ENCFF000QHI/@@download/ENCFF000QHI.bigBed hg19 archived borderline replicate concordance, inconsistent platforms, low read length biological replicates with identical biosample ENCFF000QHJ bigBed broadPeak peaks ENCSR000BRR ChIP-seq EFO:0002067 K562 cell line Homo sapiens STAT5A-human ENCAB000ALI DNA see document see document False 2012-02-29 ENCODE 2 1 ENCFF001ULM 312248 Richard Myers, HAIB f0b40451cfa204ef928d79c8dbddec86 https://www.encodeproject.org/files/ENCFF000QHJ/@@download/ENCFF000QHJ.bigBed hg19 archived borderline replicate concordance, inconsistent platforms, low read length biological replicates with identical biosample ENCFF000QHL bam alignments ENCSR000BRR ChIP-seq EFO:0002067 K562 cell line Homo sapiens STAT5A-human ENCAB000ALI DNA see document see document False 2012-02-29 ENCODE 1 ENCFF000QIB 1857020943 Richard Myers, HAIB d002541fee6a8bddb5c89aa53dd7eb02 https://www.encodeproject.org/files/ENCFF000QHL/@@download/ENCFF000QHL.bam hg19 archived borderline replicate concordance, inconsistent platforms, low read length biological replicates with identical biosample ENCFF000QHM bigWig raw signal ENCSR000BRR ChIP-seq EFO:0002067 K562 cell line Homo sapiens STAT5A-human ENCAB000ALI DNA see document see document False 2012-02-29 ENCODE 1 1 30382906 Richard Myers, HAIB 084d8d7262ad06fc523850182e3ad6b7 https://www.encodeproject.org/files/ENCFF000QHM/@@download/ENCFF000QHM.bigWig hg19 archived borderline replicate concordance, inconsistent platforms, low read length biological replicates with identical biosample, missing derived_from ENCFF000QHN bam alignments ENCSR000BRR ChIP-seq EFO:0002067 K562 cell line Homo sapiens STAT5A-human ENCAB000ALI DNA see document see document False 2012-02-29 ENCODE 2 ENCFF000QID 2074379467 Richard Myers, HAIB d28d623b6fff281f9f0b2ffd405b97d0 https://www.encodeproject.org/files/ENCFF000QHN/@@download/ENCFF000QHN.bam hg19 archived borderline replicate concordance, inconsistent platforms, low read length biological replicates with identical biosample ENCFF000QHO bigWig raw signal ENCSR000BRR ChIP-seq EFO:0002067 K562 cell line Homo sapiens STAT5A-human ENCAB000ALI DNA see document see document False 2012-02-29 ENCODE 2 1 20159200 Richard Myers, HAIB 05494b1e2ab8745803258f35a08125a5 https://www.encodeproject.org/files/ENCFF000QHO/@@download/ENCFF000QHO.bigWig hg19 archived borderline replicate concordance, inconsistent platforms, low read length biological replicates with identical biosample, missing derived_from ENCFF000QIB fastq reads ENCSR000BRR ChIP-seq EFO:0002067 K562 cell line Homo sapiens STAT5A-human ENCAB000ALI DNA see document see document False 2012-02-29 ENCODE 1 1 36 single-ended 1775274771 Richard Myers, HAIB 753d7cbd2c5bb0aa7a27db2b3f1c232b https://www.encodeproject.org/files/ENCFF000QIB/@@download/ENCFF000QIB.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000QFG/ released borderline replicate concordance, inconsistent platforms, low read length biological replicates with identical biosample ENCFF000QID fastq reads ENCSR000BRR ChIP-seq EFO:0002067 K562 cell line Homo sapiens STAT5A-human ENCAB000ALI DNA see document see document False 2012-02-29 ENCODE 2 1 36 single-ended 1970505014 Richard Myers, HAIB c39c0243f34877beff7e07e55223824f https://www.encodeproject.org/files/ENCFF000QID/@@download/ENCFF000QID.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000QFJ/ released borderline replicate concordance, inconsistent platforms, low read length biological replicates with identical biosample ENCFF001ULL bed broadPeak peaks ENCSR000BRR ChIP-seq EFO:0002067 K562 cell line Homo sapiens STAT5A-human ENCAB000ALI DNA see document see document False 2012-02-29 ENCODE 1 1 234403 Richard Myers, HAIB 9e621be00defddae25724931841fa8b5 https://www.encodeproject.org/files/ENCFF001ULL/@@download/ENCFF001ULL.bed.gz hg19 archived borderline replicate concordance, inconsistent platforms, low read length biological replicates with identical biosample, missing derived_from ENCFF001ULM bed broadPeak peaks ENCSR000BRR ChIP-seq EFO:0002067 K562 cell line Homo sapiens STAT5A-human ENCAB000ALI DNA see document see document False 2012-02-29 ENCODE 2 1 143298 Richard Myers, HAIB dd498413aa76fb71d86c44612010229d https://www.encodeproject.org/files/ENCFF001ULM/@@download/ENCFF001ULM.bed.gz hg19 archived borderline replicate concordance, inconsistent platforms, low read length biological replicates with identical biosample, missing derived_from ENCFF002CMQ bed narrowPeak optimal idr thresholded peaks ENCSR000BRR ChIP-seq EFO:0002067 K562 cell line Homo sapiens STAT5A-human ENCAB000ALI DNA see document see document False 2012-02-29 ENCODE 221518 ENCODE Consortium Analysis Working Group 3e5196912f2efefafdfbb24469bf2423 https://www.encodeproject.org/files/ENCFF002CMQ/@@download/ENCFF002CMQ.bed.gz hg19 archived borderline replicate concordance, inconsistent platforms, low read length biological replicates with identical biosample, missing derived_from ENCFF991EKU bigBed narrowPeak optimal idr thresholded peaks ENCSR000BRR ChIP-seq EFO:0002067 K562 cell line Homo sapiens STAT5A-human ENCAB000ALI DNA see document see document False 2012-02-29 ENCODE ENCFF002CMQ 526292 ENCODE Consortium faf17c07e3e7d8f7d3a82774dd0fc630 https://www.encodeproject.org/files/ENCFF991EKU/@@download/ENCFF991EKU.bigBed hg19 archived borderline replicate concordance, inconsistent platforms, low read length biological replicates with identical biosample ENCFF989BZQ bam unfiltered alignments ENCSR000BRR ChIP-seq EFO:0002067 K562 cell line Homo sapiens STAT5A-human ENCAB000ALI DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000QIB, ENCFF643CGH 1989527175 ENCODE Processing Pipeline bfd473c4fae8e4a38bed42edd2c20c03 https://www.encodeproject.org/files/ENCFF989BZQ/@@download/ENCFF989BZQ.bam GRCh38 released borderline replicate concordance, inconsistent platforms, low read length biological replicates with identical biosample ENCFF222UZK bam alignments ENCSR000BRR ChIP-seq EFO:0002067 K562 cell line Homo sapiens STAT5A-human ENCAB000ALI DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000QIB, ENCFF643CGH 1296042131 ENCODE Processing Pipeline 9c4f3d1e8c601da3d6169561b011b774 https://www.encodeproject.org/files/ENCFF222UZK/@@download/ENCFF222UZK.bam GRCh38 released borderline replicate concordance, inconsistent platforms, low read length biological replicates with identical biosample ENCFF560FJD bam unfiltered alignments ENCSR000BRR ChIP-seq EFO:0002067 K562 cell line Homo sapiens STAT5A-human ENCAB000ALI DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000QID, ENCFF643CGH 2223125883 ENCODE Processing Pipeline 8f461e79f9b21d3b3213872d0087d661 https://www.encodeproject.org/files/ENCFF560FJD/@@download/ENCFF560FJD.bam GRCh38 released borderline replicate concordance, inconsistent platforms, low read length biological replicates with identical biosample ENCFF526DBU bam alignments ENCSR000BRR ChIP-seq EFO:0002067 K562 cell line Homo sapiens STAT5A-human ENCAB000ALI DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000QID, ENCFF643CGH 1470060274 ENCODE Processing Pipeline 20b7e2b1fa239e377d49ad247f1cfaaf https://www.encodeproject.org/files/ENCFF526DBU/@@download/ENCFF526DBU.bam GRCh38 released borderline replicate concordance, inconsistent platforms, low read length biological replicates with identical biosample ENCFF876COD bam unfiltered alignments ENCSR000BRR ChIP-seq EFO:0002067 K562 cell line Homo sapiens STAT5A-human ENCAB000ALI DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000QIB, ENCFF807MUK 1984243732 ENCODE Processing Pipeline 42f979f34f523624afd00052d6fcf760 https://www.encodeproject.org/files/ENCFF876COD/@@download/ENCFF876COD.bam hg19 released borderline replicate concordance, inconsistent platforms, low read length biological replicates with identical biosample ENCFF404IDD bam unfiltered alignments ENCSR000BRR ChIP-seq EFO:0002067 K562 cell line Homo sapiens STAT5A-human ENCAB000ALI DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000QID, ENCFF807MUK 2214226379 ENCODE Processing Pipeline 6f06778e694435df45c347cf5ff17660 https://www.encodeproject.org/files/ENCFF404IDD/@@download/ENCFF404IDD.bam hg19 released borderline replicate concordance, inconsistent platforms, low read length biological replicates with identical biosample ENCFF448TVU bam alignments ENCSR000BRR ChIP-seq EFO:0002067 K562 cell line Homo sapiens STAT5A-human ENCAB000ALI DNA see document see document False 2012-02-29 ENCODE 1 36 ENCFF000QIB, ENCFF807MUK 1296506873 ENCODE Processing Pipeline abe25ba4670746723789251d9e1a7139 https://www.encodeproject.org/files/ENCFF448TVU/@@download/ENCFF448TVU.bam hg19 released borderline replicate concordance, inconsistent platforms, low read length biological replicates with identical biosample ENCFF711QEM bam alignments ENCSR000BRR ChIP-seq EFO:0002067 K562 cell line Homo sapiens STAT5A-human ENCAB000ALI DNA see document see document False 2012-02-29 ENCODE 2 36 ENCFF000QID, ENCFF807MUK 1470601491 ENCODE Processing Pipeline dfb68d2387b539ec5079fb0b50671034 https://www.encodeproject.org/files/ENCFF711QEM/@@download/ENCFF711QEM.bam hg19 released borderline replicate concordance, inconsistent platforms, low read length biological replicates with identical biosample ENCFF997GFC bigWig signal p-value ENCSR000BRR ChIP-seq EFO:0002067 K562 cell line Homo sapiens STAT5A-human ENCAB000ALI DNA see document see document False 2012-02-29 ENCODE 1 ENCFF222UZK, ENCFF533FQH, ENCFF836OEO 983595831 ENCODE Processing Pipeline 3bb20a4853376f9c0569545e753458af https://www.encodeproject.org/files/ENCFF997GFC/@@download/ENCFF997GFC.bigWig GRCh38 released borderline replicate concordance, inconsistent platforms, low read length biological replicates with identical biosample ENCFF264KML bigWig signal p-value ENCSR000BRR ChIP-seq EFO:0002067 K562 cell line Homo sapiens STAT5A-human ENCAB000ALI DNA see document see document False 2012-02-29 ENCODE 2 ENCFF526DBU, ENCFF533FQH, ENCFF836OEO 1018124105 ENCODE Processing Pipeline 1a5539a2c128c8ea38e4a88080823043 https://www.encodeproject.org/files/ENCFF264KML/@@download/ENCFF264KML.bigWig GRCh38 released borderline replicate concordance, inconsistent platforms, low read length biological replicates with identical biosample ENCFF641YMU bigWig signal p-value ENCSR000BRR ChIP-seq EFO:0002067 K562 cell line Homo sapiens STAT5A-human ENCAB000ALI DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF222UZK, ENCFF526DBU, ENCFF533FQH, ENCFF836OEO 1390868577 ENCODE Processing Pipeline 279e1ad3698ecb2be26a308eeb4a45b8 https://www.encodeproject.org/files/ENCFF641YMU/@@download/ENCFF641YMU.bigWig GRCh38 released borderline replicate concordance, inconsistent platforms, low read length biological replicates with identical biosample ENCFF964JOG bigWig fold change over control ENCSR000BRR ChIP-seq EFO:0002067 K562 cell line Homo sapiens STAT5A-human ENCAB000ALI DNA see document see document False 2012-02-29 ENCODE 1 ENCFF222UZK, ENCFF533FQH, ENCFF836OEO 858150727 ENCODE Processing Pipeline 0cc7c32c4c1caac7b0387ded74ba94ff https://www.encodeproject.org/files/ENCFF964JOG/@@download/ENCFF964JOG.bigWig GRCh38 released borderline replicate concordance, inconsistent platforms, low read length biological replicates with identical biosample ENCFF738ISI bigWig fold change over control ENCSR000BRR ChIP-seq EFO:0002067 K562 cell line Homo sapiens STAT5A-human ENCAB000ALI DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF222UZK, ENCFF526DBU, ENCFF533FQH, ENCFF836OEO 1351596151 ENCODE Processing Pipeline 43cd8947ad562cfae79bbc2ab73af965 https://www.encodeproject.org/files/ENCFF738ISI/@@download/ENCFF738ISI.bigWig GRCh38 released borderline replicate concordance, inconsistent platforms, low read length biological replicates with identical biosample ENCFF253IEH bigWig fold change over control ENCSR000BRR ChIP-seq EFO:0002067 K562 cell line Homo sapiens STAT5A-human ENCAB000ALI DNA see document see document False 2012-02-29 ENCODE 2 ENCFF526DBU, ENCFF533FQH, ENCFF836OEO 922958129 ENCODE Processing Pipeline 763f61ecd6850a0fcbb78fbb194e3f9c https://www.encodeproject.org/files/ENCFF253IEH/@@download/ENCFF253IEH.bigWig GRCh38 released borderline replicate concordance, inconsistent platforms, low read length biological replicates with identical biosample ENCFF788VWT bed narrowPeak peaks ENCSR000BRR ChIP-seq EFO:0002067 K562 cell line Homo sapiens STAT5A-human ENCAB000ALI DNA see document see document False 2012-02-29 ENCODE 1 ENCFF222UZK, ENCFF533FQH, ENCFF836OEO 6222897 ENCODE Processing Pipeline 54254c31c8f876ab8e61083e9d1c4523 https://www.encodeproject.org/files/ENCFF788VWT/@@download/ENCFF788VWT.bed.gz GRCh38 released borderline replicate concordance, inconsistent platforms, low read length biological replicates with identical biosample ENCFF489GYZ bigBed narrowPeak peaks ENCSR000BRR ChIP-seq EFO:0002067 K562 cell line Homo sapiens STAT5A-human ENCAB000ALI DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF651KJX 13412398 ENCODE Processing Pipeline 001d25cc96b6b4e1d2fccfc7f58edfaf https://www.encodeproject.org/files/ENCFF489GYZ/@@download/ENCFF489GYZ.bigBed GRCh38 released borderline replicate concordance, inconsistent platforms, low read length biological replicates with identical biosample ENCFF651KJX bed narrowPeak peaks ENCSR000BRR ChIP-seq EFO:0002067 K562 cell line Homo sapiens STAT5A-human ENCAB000ALI DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF222UZK, ENCFF526DBU, ENCFF533FQH, ENCFF836OEO 6834126 ENCODE Processing Pipeline 30af8f308b4b5023fc7195e6db502b05 https://www.encodeproject.org/files/ENCFF651KJX/@@download/ENCFF651KJX.bed.gz GRCh38 released borderline replicate concordance, inconsistent platforms, low read length biological replicates with identical biosample ENCFF916OUG bed narrowPeak conservative idr thresholded peaks ENCSR000BRR ChIP-seq EFO:0002067 K562 cell line Homo sapiens STAT5A-human ENCAB000ALI DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF313VQW, ENCFF419RSJ, ENCFF651KJX, ENCFF788VWT 168648 ENCODE Processing Pipeline c43ed1d7e6aa9735cf1fe51825df27ed https://www.encodeproject.org/files/ENCFF916OUG/@@download/ENCFF916OUG.bed.gz GRCh38 released borderline replicate concordance, inconsistent platforms, low read length biological replicates with identical biosample ENCFF065VPF bigBed narrowPeak conservative idr thresholded peaks ENCSR000BRR ChIP-seq EFO:0002067 K562 cell line Homo sapiens STAT5A-human ENCAB000ALI DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF916OUG 382971 ENCODE Processing Pipeline 2875015d63ac92c1311443844f03d414 https://www.encodeproject.org/files/ENCFF065VPF/@@download/ENCFF065VPF.bigBed GRCh38 released borderline replicate concordance, inconsistent platforms, low read length biological replicates with identical biosample ENCFF313VQW bed narrowPeak peaks ENCSR000BRR ChIP-seq EFO:0002067 K562 cell line Homo sapiens STAT5A-human ENCAB000ALI DNA see document see document False 2012-02-29 ENCODE 2 ENCFF526DBU, ENCFF533FQH, ENCFF836OEO 6072430 ENCODE Processing Pipeline 42b19a4904c846138e74f4eaef8128bc https://www.encodeproject.org/files/ENCFF313VQW/@@download/ENCFF313VQW.bed.gz GRCh38 released borderline replicate concordance, inconsistent platforms, low read length biological replicates with identical biosample ENCFF517IXK bed narrowPeak optimal idr thresholded peaks ENCSR000BRR ChIP-seq EFO:0002067 K562 cell line Homo sapiens STAT5A-human ENCAB000ALI DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF313VQW, ENCFF419RSJ, ENCFF651KJX, ENCFF788VWT 236998 ENCODE Processing Pipeline 25aaa0e8f779d8d52cd52bed7d3e3c34 https://www.encodeproject.org/files/ENCFF517IXK/@@download/ENCFF517IXK.bed.gz GRCh38 released borderline replicate concordance, inconsistent platforms, low read length biological replicates with identical biosample ENCFF930EDE bigBed narrowPeak peaks ENCSR000BRR ChIP-seq EFO:0002067 K562 cell line Homo sapiens STAT5A-human ENCAB000ALI DNA see document see document False 2012-02-29 ENCODE 1 ENCFF788VWT 13404554 ENCODE Processing Pipeline 10eeaa396281742a8d4864b7e9aee2b7 https://www.encodeproject.org/files/ENCFF930EDE/@@download/ENCFF930EDE.bigBed GRCh38 released borderline replicate concordance, inconsistent platforms, low read length biological replicates with identical biosample ENCFF896AZL bigBed narrowPeak peaks ENCSR000BRR ChIP-seq EFO:0002067 K562 cell line Homo sapiens STAT5A-human ENCAB000ALI DNA see document see document False 2012-02-29 ENCODE 2 ENCFF313VQW 11344552 ENCODE Processing Pipeline 544629796b87fc3dbf634daf06a07941 https://www.encodeproject.org/files/ENCFF896AZL/@@download/ENCFF896AZL.bigBed GRCh38 released borderline replicate concordance, inconsistent platforms, low read length biological replicates with identical biosample ENCFF994QPA bigBed narrowPeak optimal idr thresholded peaks ENCSR000BRR ChIP-seq EFO:0002067 K562 cell line Homo sapiens STAT5A-human ENCAB000ALI DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF517IXK 481509 ENCODE Processing Pipeline 07e0e34298b24eec186e8a7d49705ce3 https://www.encodeproject.org/files/ENCFF994QPA/@@download/ENCFF994QPA.bigBed GRCh38 released borderline replicate concordance, inconsistent platforms, low read length biological replicates with identical biosample ENCFF199ALJ bigWig signal p-value ENCSR000BRR ChIP-seq EFO:0002067 K562 cell line Homo sapiens STAT5A-human ENCAB000ALI DNA see document see document False 2012-02-29 ENCODE 1 ENCFF448TVU, ENCFF522HDC, ENCFF727JYL 1000340789 ENCODE Processing Pipeline f404e838e1e8ba42a853d9366a4171d8 https://www.encodeproject.org/files/ENCFF199ALJ/@@download/ENCFF199ALJ.bigWig hg19 released borderline replicate concordance, inconsistent platforms, low read length biological replicates with identical biosample ENCFF722WMT bigWig fold change over control ENCSR000BRR ChIP-seq EFO:0002067 K562 cell line Homo sapiens STAT5A-human ENCAB000ALI DNA see document see document False 2012-02-29 ENCODE 1 ENCFF448TVU, ENCFF522HDC, ENCFF727JYL 871968723 ENCODE Processing Pipeline c29ea4e91312c02da099f23c5da733de https://www.encodeproject.org/files/ENCFF722WMT/@@download/ENCFF722WMT.bigWig hg19 released borderline replicate concordance, inconsistent platforms, low read length biological replicates with identical biosample ENCFF253AWU bigWig signal p-value ENCSR000BRR ChIP-seq EFO:0002067 K562 cell line Homo sapiens STAT5A-human ENCAB000ALI DNA see document see document False 2012-02-29 ENCODE 2 ENCFF522HDC, ENCFF711QEM, ENCFF727JYL 1113344000 ENCODE Processing Pipeline 56ee7d62db7b3fe1694e7e32e4c83867 https://www.encodeproject.org/files/ENCFF253AWU/@@download/ENCFF253AWU.bigWig hg19 released borderline replicate concordance, inconsistent platforms, low read length biological replicates with identical biosample ENCFF746KSV bigWig signal p-value ENCSR000BRR ChIP-seq EFO:0002067 K562 cell line Homo sapiens STAT5A-human ENCAB000ALI DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF448TVU, ENCFF522HDC, ENCFF711QEM, ENCFF727JYL 1171653920 ENCODE Processing Pipeline 976ceefb960790db0178b97e76dc4082 https://www.encodeproject.org/files/ENCFF746KSV/@@download/ENCFF746KSV.bigWig hg19 released borderline replicate concordance, inconsistent platforms, low read length biological replicates with identical biosample ENCFF373WLW bed narrowPeak peaks ENCSR000BRR ChIP-seq EFO:0002067 K562 cell line Homo sapiens STAT5A-human ENCAB000ALI DNA see document see document False 2012-02-29 ENCODE 1 ENCFF448TVU, ENCFF522HDC, ENCFF727JYL 6224554 ENCODE Processing Pipeline 63cf6cc7aeb614a2c75208157d5e59db https://www.encodeproject.org/files/ENCFF373WLW/@@download/ENCFF373WLW.bed.gz hg19 released borderline replicate concordance, inconsistent platforms, low read length biological replicates with identical biosample ENCFF562UJV bed narrowPeak peaks ENCSR000BRR ChIP-seq EFO:0002067 K562 cell line Homo sapiens STAT5A-human ENCAB000ALI DNA see document see document False 2012-02-29 ENCODE 2 ENCFF522HDC, ENCFF711QEM, ENCFF727JYL 6125895 ENCODE Processing Pipeline 4fe3ea1090463a5a9479a4052efef902 https://www.encodeproject.org/files/ENCFF562UJV/@@download/ENCFF562UJV.bed.gz hg19 released borderline replicate concordance, inconsistent platforms, low read length biological replicates with identical biosample ENCFF556KAN bed narrowPeak peaks ENCSR000BRR ChIP-seq EFO:0002067 K562 cell line Homo sapiens STAT5A-human ENCAB000ALI DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF448TVU, ENCFF522HDC, ENCFF711QEM, ENCFF727JYL 6855621 ENCODE Processing Pipeline 5597f3e31d0ec9d2934628ea38c5037b https://www.encodeproject.org/files/ENCFF556KAN/@@download/ENCFF556KAN.bed.gz hg19 released borderline replicate concordance, inconsistent platforms, low read length biological replicates with identical biosample ENCFF506CUM bigBed narrowPeak peaks ENCSR000BRR ChIP-seq EFO:0002067 K562 cell line Homo sapiens STAT5A-human ENCAB000ALI DNA see document see document False 2012-02-29 ENCODE 2 ENCFF562UJV 11356294 ENCODE Processing Pipeline f99e598ab582a78cca271901b10f9006 https://www.encodeproject.org/files/ENCFF506CUM/@@download/ENCFF506CUM.bigBed hg19 released borderline replicate concordance, inconsistent platforms, low read length biological replicates with identical biosample ENCFF082PNV bigWig fold change over control ENCSR000BRR ChIP-seq EFO:0002067 K562 cell line Homo sapiens STAT5A-human ENCAB000ALI DNA see document see document False 2012-02-29 ENCODE 2 ENCFF522HDC, ENCFF711QEM, ENCFF727JYL 927693642 ENCODE Processing Pipeline abd3a7d37370309fec66c59fb5b9577b https://www.encodeproject.org/files/ENCFF082PNV/@@download/ENCFF082PNV.bigWig hg19 released borderline replicate concordance, inconsistent platforms, low read length biological replicates with identical biosample ENCFF885JRR bigBed narrowPeak optimal idr thresholded peaks ENCSR000BRR ChIP-seq EFO:0002067 K562 cell line Homo sapiens STAT5A-human ENCAB000ALI DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF696KPD 487067 ENCODE Processing Pipeline d883871d8eb32e6026b24661481a2f9d https://www.encodeproject.org/files/ENCFF885JRR/@@download/ENCFF885JRR.bigBed hg19 released borderline replicate concordance, inconsistent platforms, low read length biological replicates with identical biosample ENCFF832FFP bigWig fold change over control ENCSR000BRR ChIP-seq EFO:0002067 K562 cell line Homo sapiens STAT5A-human ENCAB000ALI DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF448TVU, ENCFF522HDC, ENCFF711QEM, ENCFF727JYL 1348285513 ENCODE Processing Pipeline 374416bfaecd580901d6387401a5c2b4 https://www.encodeproject.org/files/ENCFF832FFP/@@download/ENCFF832FFP.bigWig hg19 released borderline replicate concordance, inconsistent platforms, low read length biological replicates with identical biosample ENCFF126MOY bed narrowPeak conservative idr thresholded peaks ENCSR000BRR ChIP-seq EFO:0002067 K562 cell line Homo sapiens STAT5A-human ENCAB000ALI DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF001TDO, ENCFF373WLW, ENCFF556KAN, ENCFF562UJV 175641 ENCODE Processing Pipeline 2746234744df3cd478f150b01f6ea2a5 https://www.encodeproject.org/files/ENCFF126MOY/@@download/ENCFF126MOY.bed.gz hg19 released borderline replicate concordance, inconsistent platforms, low read length biological replicates with identical biosample ENCFF631JIT bigBed narrowPeak peaks ENCSR000BRR ChIP-seq EFO:0002067 K562 cell line Homo sapiens STAT5A-human ENCAB000ALI DNA see document see document False 2012-02-29 ENCODE 1 ENCFF373WLW 13402850 ENCODE Processing Pipeline 334ce4ef1acf85cab072f10a944448fb https://www.encodeproject.org/files/ENCFF631JIT/@@download/ENCFF631JIT.bigBed hg19 released borderline replicate concordance, inconsistent platforms, low read length biological replicates with identical biosample ENCFF087XZN bigBed narrowPeak conservative idr thresholded peaks ENCSR000BRR ChIP-seq EFO:0002067 K562 cell line Homo sapiens STAT5A-human ENCAB000ALI DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF126MOY 391197 ENCODE Processing Pipeline 47aaf38be18563d087f6f56a42aa8dfa https://www.encodeproject.org/files/ENCFF087XZN/@@download/ENCFF087XZN.bigBed hg19 released borderline replicate concordance, inconsistent platforms, low read length biological replicates with identical biosample ENCFF696KPD bed narrowPeak optimal idr thresholded peaks ENCSR000BRR ChIP-seq EFO:0002067 K562 cell line Homo sapiens STAT5A-human ENCAB000ALI DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF001TDO, ENCFF373WLW, ENCFF556KAN, ENCFF562UJV 241687 ENCODE Processing Pipeline c7fe8f342e3192db1d65922e864f8c7e https://www.encodeproject.org/files/ENCFF696KPD/@@download/ENCFF696KPD.bed.gz hg19 released borderline replicate concordance, inconsistent platforms, low read length biological replicates with identical biosample ENCFF399LBK bigBed narrowPeak peaks ENCSR000BRR ChIP-seq EFO:0002067 K562 cell line Homo sapiens STAT5A-human ENCAB000ALI DNA see document see document False 2012-02-29 ENCODE 1, 2 ENCFF556KAN 13426352 ENCODE Processing Pipeline c1d3d9786b9fd7a6020a29c2b98ab40b https://www.encodeproject.org/files/ENCFF399LBK/@@download/ENCFF399LBK.bigBed hg19 released borderline replicate concordance, inconsistent platforms, low read length biological replicates with identical biosample ENCFF000ZBE bam alignments ENCSR000EGB ChIP-seq EFO:0002067 K562 cell line Homo sapiens TBL1XR1-human ENCAB000ALQ DNA see document see document False 2012-05-14 ENCODE 1 1 586586793 Michael Snyder, Stanford 360f1c714c590965681f37822b87c499 https://www.encodeproject.org/files/ENCFF000ZBE/@@download/ENCFF000ZBE.bam hg19 archived mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample, missing derived_from ENCFF000ZBG bigBed narrowPeak peaks ENCSR000EGB ChIP-seq EFO:0002067 K562 cell line Homo sapiens TBL1XR1-human ENCAB000ALQ DNA see document see document False 2012-05-14 ENCODE ENCFF001VPB 2875582 Michael Snyder, Stanford 865aaeb5a0857b70861edc63a5dcb7a6 https://www.encodeproject.org/files/ENCFF000ZBG/@@download/ENCFF000ZBG.bigBed hg19 archived mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF000ZBH fastq reads ENCSR000EGB ChIP-seq EFO:0002067 K562 cell line Homo sapiens TBL1XR1-human ENCAB000ALQ DNA see document see document False 2012-05-14 ENCODE 1 1 36 single-ended 1002188440 Michael Snyder, Stanford e055c2b30d0ae02b7076d60f9ead3b0b https://www.encodeproject.org/files/ENCFF000ZBH/@@download/ENCFF000ZBH.fastq.gz Illumina Genome Analyzer /files/ENCFF000YRB/ released mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF000ZBJ fastq reads ENCSR000EGB ChIP-seq EFO:0002067 K562 cell line Homo sapiens TBL1XR1-human ENCAB000ALQ DNA see document see document False 2012-05-14 ENCODE 2 1 36 single-ended 1523575651 Michael Snyder, Stanford 7c5a5ad29dc7644a8ee8b18191580bd3 https://www.encodeproject.org/files/ENCFF000ZBJ/@@download/ENCFF000ZBJ.fastq.gz Illumina Genome Analyzer /files/ENCFF000YRB/ released mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF000ZBL bigWig signal ENCSR000EGB ChIP-seq EFO:0002067 K562 cell line Homo sapiens TBL1XR1-human ENCAB000ALQ DNA see document see document False 2012-05-14 ENCODE 469516456 Michael Snyder, Stanford 3565a94d7ffd6fc662a46931982a5bb7 https://www.encodeproject.org/files/ENCFF000ZBL/@@download/ENCFF000ZBL.bigWig hg19 archived mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample, missing derived_from ENCFF000ZBM bam alignments ENCSR000EGB ChIP-seq EFO:0002067 K562 cell line Homo sapiens TBL1XR1-human ENCAB000ALQ DNA see document see document False 2012-05-14 ENCODE 2 1 785507860 Michael Snyder, Stanford 55617a27051b453be5fed59d24ac6d85 https://www.encodeproject.org/files/ENCFF000ZBM/@@download/ENCFF000ZBM.bam hg19 archived mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample, missing derived_from ENCFF001VPB bed narrowPeak peaks ENCSR000EGB ChIP-seq EFO:0002067 K562 cell line Homo sapiens TBL1XR1-human ENCAB000ALQ DNA see document see document False 2012-05-14 ENCODE 1157057 Michael Snyder, Stanford c4f170ccd454708a9833617832e98eda https://www.encodeproject.org/files/ENCFF001VPB/@@download/ENCFF001VPB.bed.gz hg19 archived mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample, missing derived_from ENCFF002CYJ bed narrowPeak optimal idr thresholded peaks ENCSR000EGB ChIP-seq EFO:0002067 K562 cell line Homo sapiens TBL1XR1-human ENCAB000ALQ DNA see document see document False 2012-05-14 ENCODE 190993 ENCODE Consortium Analysis Working Group ff50199d757b891bf404ac2488933573 https://www.encodeproject.org/files/ENCFF002CYJ/@@download/ENCFF002CYJ.bed.gz hg19 archived mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample, missing derived_from ENCFF063UNZ bigBed narrowPeak optimal idr thresholded peaks ENCSR000EGB ChIP-seq EFO:0002067 K562 cell line Homo sapiens TBL1XR1-human ENCAB000ALQ DNA see document see document False 2012-05-14 ENCODE ENCFF002CYJ 439190 ENCODE Consortium 1ecdaafea25737078952adae38d56286 https://www.encodeproject.org/files/ENCFF063UNZ/@@download/ENCFF063UNZ.bigBed hg19 archived mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF015ZXF bam unfiltered alignments ENCSR000EGB ChIP-seq EFO:0002067 K562 cell line Homo sapiens TBL1XR1-human ENCAB000ALQ DNA see document see document False 2012-05-14 ENCODE 1 36 ENCFF000ZBH, ENCFF643CGH 1148559494 ENCODE Processing Pipeline 53d2601e1a59cbac0521c51c2a489ecb https://www.encodeproject.org/files/ENCFF015ZXF/@@download/ENCFF015ZXF.bam GRCh38 released mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF188QGH bam alignments ENCSR000EGB ChIP-seq EFO:0002067 K562 cell line Homo sapiens TBL1XR1-human ENCAB000ALQ DNA see document see document False 2012-05-14 ENCODE 1 36 ENCFF000ZBH, ENCFF643CGH 814517192 ENCODE Processing Pipeline b40b68187f57193df60a1fd61a8f8587 https://www.encodeproject.org/files/ENCFF188QGH/@@download/ENCFF188QGH.bam GRCh38 released mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF298NWW bam unfiltered alignments ENCSR000EGB ChIP-seq EFO:0002067 K562 cell line Homo sapiens TBL1XR1-human ENCAB000ALQ DNA see document see document False 2012-05-14 ENCODE 2 36 ENCFF000ZBJ, ENCFF643CGH 1711972157 ENCODE Processing Pipeline 4c1685ef805a52f6c2a61f0dcc07d85e https://www.encodeproject.org/files/ENCFF298NWW/@@download/ENCFF298NWW.bam GRCh38 released mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF719NDH bam alignments ENCSR000EGB ChIP-seq EFO:0002067 K562 cell line Homo sapiens TBL1XR1-human ENCAB000ALQ DNA see document see document False 2012-05-14 ENCODE 2 36 ENCFF000ZBJ, ENCFF643CGH 1159188367 ENCODE Processing Pipeline e4bd21387bd2bf74181f8a6f8faefe40 https://www.encodeproject.org/files/ENCFF719NDH/@@download/ENCFF719NDH.bam GRCh38 released mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF999RTZ bam unfiltered alignments ENCSR000EGB ChIP-seq EFO:0002067 K562 cell line Homo sapiens TBL1XR1-human ENCAB000ALQ DNA see document see document False 2012-05-14 ENCODE 1 36 ENCFF000ZBH, ENCFF807MUK 1143828037 ENCODE Processing Pipeline 418249c32ef4291a8d631abf527670f0 https://www.encodeproject.org/files/ENCFF999RTZ/@@download/ENCFF999RTZ.bam hg19 released mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF232HND bam alignments ENCSR000EGB ChIP-seq EFO:0002067 K562 cell line Homo sapiens TBL1XR1-human ENCAB000ALQ DNA see document see document False 2012-05-14 ENCODE 1 36 ENCFF000ZBH, ENCFF807MUK 815128030 ENCODE Processing Pipeline 9bcd68f523d0ee6019ce697c61ad0cd5 https://www.encodeproject.org/files/ENCFF232HND/@@download/ENCFF232HND.bam hg19 released mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF587GLT bam unfiltered alignments ENCSR000EGB ChIP-seq EFO:0002067 K562 cell line Homo sapiens TBL1XR1-human ENCAB000ALQ DNA see document see document False 2012-05-14 ENCODE 2 36 ENCFF000ZBJ, ENCFF807MUK 1704668416 ENCODE Processing Pipeline 05ce54ad7e89500ba50c8f43cd0f62a5 https://www.encodeproject.org/files/ENCFF587GLT/@@download/ENCFF587GLT.bam hg19 released mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF375HMX bam alignments ENCSR000EGB ChIP-seq EFO:0002067 K562 cell line Homo sapiens TBL1XR1-human ENCAB000ALQ DNA see document see document False 2012-05-14 ENCODE 2 36 ENCFF000ZBJ, ENCFF807MUK 1159869390 ENCODE Processing Pipeline 52376b4f687b8f6c25b27d39e4d11c75 https://www.encodeproject.org/files/ENCFF375HMX/@@download/ENCFF375HMX.bam hg19 released mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF850MTK bed narrowPeak peaks ENCSR000EGB ChIP-seq EFO:0002067 K562 cell line Homo sapiens TBL1XR1-human ENCAB000ALQ DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF232HND, ENCFF375HMX, ENCFF710NTS 6177942 ENCODE Processing Pipeline 3ef47a2b6d104c8390e87b2833a15a91 https://www.encodeproject.org/files/ENCFF850MTK/@@download/ENCFF850MTK.bed.gz hg19 released mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF349SGO bigWig signal p-value ENCSR000EGB ChIP-seq EFO:0002067 K562 cell line Homo sapiens TBL1XR1-human ENCAB000ALQ DNA see document see document False 2012-05-14 ENCODE 1 ENCFF232HND, ENCFF710NTS 544694523 ENCODE Processing Pipeline f9062b97da35a05773fcb55c24e93ffb https://www.encodeproject.org/files/ENCFF349SGO/@@download/ENCFF349SGO.bigWig hg19 released mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF708HEG bigWig fold change over control ENCSR000EGB ChIP-seq EFO:0002067 K562 cell line Homo sapiens TBL1XR1-human ENCAB000ALQ DNA see document see document False 2012-05-14 ENCODE 1 ENCFF232HND, ENCFF710NTS 425464036 ENCODE Processing Pipeline 93f7bd380d31c7a2d85b8ee25c665000 https://www.encodeproject.org/files/ENCFF708HEG/@@download/ENCFF708HEG.bigWig hg19 released mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF676HRI bed narrowPeak peaks ENCSR000EGB ChIP-seq EFO:0002067 K562 cell line Homo sapiens TBL1XR1-human ENCAB000ALQ DNA see document see document False 2012-05-14 ENCODE 2 ENCFF375HMX, ENCFF710NTS 5153956 ENCODE Processing Pipeline 8d4df699854aa4528b138d46b01e6f27 https://www.encodeproject.org/files/ENCFF676HRI/@@download/ENCFF676HRI.bed.gz hg19 released mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF751EWQ bigBed narrowPeak peaks ENCSR000EGB ChIP-seq EFO:0002067 K562 cell line Homo sapiens TBL1XR1-human ENCAB000ALQ DNA see document see document False 2012-05-14 ENCODE 2 ENCFF676HRI 11080381 ENCODE Processing Pipeline 6376fbb8f302e2666fbb9d71aa6e947f https://www.encodeproject.org/files/ENCFF751EWQ/@@download/ENCFF751EWQ.bigBed hg19 released mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF128RDF bigBed narrowPeak peaks ENCSR000EGB ChIP-seq EFO:0002067 K562 cell line Homo sapiens TBL1XR1-human ENCAB000ALQ DNA see document see document False 2012-05-14 ENCODE 1 ENCFF205BAR 10983693 ENCODE Processing Pipeline 79e7200dd310faf3a034c61d7cde49e3 https://www.encodeproject.org/files/ENCFF128RDF/@@download/ENCFF128RDF.bigBed hg19 released mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF791AOX bigWig signal p-value ENCSR000EGB ChIP-seq EFO:0002067 K562 cell line Homo sapiens TBL1XR1-human ENCAB000ALQ DNA see document see document False 2012-05-14 ENCODE 2 ENCFF375HMX, ENCFF710NTS 540612820 ENCODE Processing Pipeline 11f911c049ab69fee5bf220f0325e0ed https://www.encodeproject.org/files/ENCFF791AOX/@@download/ENCFF791AOX.bigWig hg19 released mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF563ATS bigWig fold change over control ENCSR000EGB ChIP-seq EFO:0002067 K562 cell line Homo sapiens TBL1XR1-human ENCAB000ALQ DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF232HND, ENCFF375HMX, ENCFF710NTS 789926495 ENCODE Processing Pipeline b1cbfcb951dbe3b0c3aada0670394d39 https://www.encodeproject.org/files/ENCFF563ATS/@@download/ENCFF563ATS.bigWig hg19 released mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF205BAR bed narrowPeak peaks ENCSR000EGB ChIP-seq EFO:0002067 K562 cell line Homo sapiens TBL1XR1-human ENCAB000ALQ DNA see document see document False 2012-05-14 ENCODE 1 ENCFF232HND, ENCFF710NTS 5205295 ENCODE Processing Pipeline 0668bcb1f596df50e9193d8ba5c90e50 https://www.encodeproject.org/files/ENCFF205BAR/@@download/ENCFF205BAR.bed.gz hg19 released mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF120BCE bigWig fold change over control ENCSR000EGB ChIP-seq EFO:0002067 K562 cell line Homo sapiens TBL1XR1-human ENCAB000ALQ DNA see document see document False 2012-05-14 ENCODE 2 ENCFF375HMX, ENCFF710NTS 528262664 ENCODE Processing Pipeline bd57e37df725a9844a84be7b226e6093 https://www.encodeproject.org/files/ENCFF120BCE/@@download/ENCFF120BCE.bigWig hg19 released mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF626MVT bed narrowPeak optimal idr thresholded peaks ENCSR000EGB ChIP-seq EFO:0002067 K562 cell line Homo sapiens TBL1XR1-human ENCAB000ALQ DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF001TDO, ENCFF205BAR, ENCFF676HRI, ENCFF850MTK 276959 ENCODE Processing Pipeline 2431f6463d18398443482deaf2effc00 https://www.encodeproject.org/files/ENCFF626MVT/@@download/ENCFF626MVT.bed.gz hg19 released mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF477JYV bigWig signal p-value ENCSR000EGB ChIP-seq EFO:0002067 K562 cell line Homo sapiens TBL1XR1-human ENCAB000ALQ DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF232HND, ENCFF375HMX, ENCFF710NTS 510895125 ENCODE Processing Pipeline b8d75dce9147e5420b96add39c525cdd https://www.encodeproject.org/files/ENCFF477JYV/@@download/ENCFF477JYV.bigWig hg19 released mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF823JUG bed narrowPeak conservative idr thresholded peaks ENCSR000EGB ChIP-seq EFO:0002067 K562 cell line Homo sapiens TBL1XR1-human ENCAB000ALQ DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF001TDO, ENCFF205BAR, ENCFF676HRI, ENCFF850MTK 253500 ENCODE Processing Pipeline 857c0f6ad4a05f14a3198a73d5d69eb9 https://www.encodeproject.org/files/ENCFF823JUG/@@download/ENCFF823JUG.bed.gz hg19 released mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF221KYS bigBed narrowPeak peaks ENCSR000EGB ChIP-seq EFO:0002067 K562 cell line Homo sapiens TBL1XR1-human ENCAB000ALQ DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF850MTK 13379689 ENCODE Processing Pipeline 80685e3c133648af05c0354da8eca314 https://www.encodeproject.org/files/ENCFF221KYS/@@download/ENCFF221KYS.bigBed hg19 released mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF957DJB bigBed narrowPeak conservative idr thresholded peaks ENCSR000EGB ChIP-seq EFO:0002067 K562 cell line Homo sapiens TBL1XR1-human ENCAB000ALQ DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF823JUG 471762 ENCODE Processing Pipeline bba8006d861bdc07eed8491ff6b07104 https://www.encodeproject.org/files/ENCFF957DJB/@@download/ENCFF957DJB.bigBed hg19 released mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF239EOW bigBed narrowPeak optimal idr thresholded peaks ENCSR000EGB ChIP-seq EFO:0002067 K562 cell line Homo sapiens TBL1XR1-human ENCAB000ALQ DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF626MVT 504034 ENCODE Processing Pipeline 02f39dff490b03e233daf0c41539b671 https://www.encodeproject.org/files/ENCFF239EOW/@@download/ENCFF239EOW.bigBed hg19 released mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF543IVG bigWig signal p-value ENCSR000EGB ChIP-seq EFO:0002067 K562 cell line Homo sapiens TBL1XR1-human ENCAB000ALQ DNA see document see document False 2012-05-14 ENCODE 2 ENCFF719NDH 540003920 ENCODE Processing Pipeline cbd9c3cb1e52dd0079edb281017f9fb7 https://www.encodeproject.org/files/ENCFF543IVG/@@download/ENCFF543IVG.bigWig GRCh38 released mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF745NRL bigWig signal p-value ENCSR000EGB ChIP-seq EFO:0002067 K562 cell line Homo sapiens TBL1XR1-human ENCAB000ALQ DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF188QGH, ENCFF719NDH 536219215 ENCODE Processing Pipeline 68964c95bbf577eab81b27dbc690f482 https://www.encodeproject.org/files/ENCFF745NRL/@@download/ENCFF745NRL.bigWig GRCh38 released mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF852AMU bigWig signal p-value ENCSR000EGB ChIP-seq EFO:0002067 K562 cell line Homo sapiens TBL1XR1-human ENCAB000ALQ DNA see document see document False 2012-05-14 ENCODE 1 ENCFF188QGH 485686853 ENCODE Processing Pipeline ebca9769e12d49866959e947e3587171 https://www.encodeproject.org/files/ENCFF852AMU/@@download/ENCFF852AMU.bigWig GRCh38 released mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF882MIL bigWig fold change over control ENCSR000EGB ChIP-seq EFO:0002067 K562 cell line Homo sapiens TBL1XR1-human ENCAB000ALQ DNA see document see document False 2012-05-14 ENCODE 1 ENCFF188QGH 431717581 ENCODE Processing Pipeline 75e4b87163a652f35aeac527e71fa098 https://www.encodeproject.org/files/ENCFF882MIL/@@download/ENCFF882MIL.bigWig GRCh38 released mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF914ZVR bigWig fold change over control ENCSR000EGB ChIP-seq EFO:0002067 K562 cell line Homo sapiens TBL1XR1-human ENCAB000ALQ DNA see document see document False 2012-05-14 ENCODE 2 ENCFF719NDH 520783063 ENCODE Processing Pipeline 9090c2e12ac29129a55c7cd2f3d100a2 https://www.encodeproject.org/files/ENCFF914ZVR/@@download/ENCFF914ZVR.bigWig GRCh38 released mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF957BZU bigBed narrowPeak optimal idr thresholded peaks ENCSR000EGB ChIP-seq EFO:0002067 K562 cell line Homo sapiens TBL1XR1-human ENCAB000ALQ DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF868SWL 503459 ENCODE Processing Pipeline 4ee9593f10534bac3538cde4313e9b89 https://www.encodeproject.org/files/ENCFF957BZU/@@download/ENCFF957BZU.bigBed GRCh38 released mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF394OPM bigBed narrowPeak peaks ENCSR000EGB ChIP-seq EFO:0002067 K562 cell line Homo sapiens TBL1XR1-human ENCAB000ALQ DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF487WEO 13385300 ENCODE Processing Pipeline 3e0fb029603bdeea88784d016c596127 https://www.encodeproject.org/files/ENCFF394OPM/@@download/ENCFF394OPM.bigBed GRCh38 released mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF400AUH bed narrowPeak peaks ENCSR000EGB ChIP-seq EFO:0002067 K562 cell line Homo sapiens TBL1XR1-human ENCAB000ALQ DNA see document see document False 2012-05-14 ENCODE 1 ENCFF188QGH 5179889 ENCODE Processing Pipeline 64651123ac68cdda4ccd879a59b7a88c https://www.encodeproject.org/files/ENCFF400AUH/@@download/ENCFF400AUH.bed.gz GRCh38 released mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF992BIU bed narrowPeak conservative idr thresholded peaks ENCSR000EGB ChIP-seq EFO:0002067 K562 cell line Homo sapiens TBL1XR1-human ENCAB000ALQ DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF400AUH, ENCFF417VTJ, ENCFF419RSJ, ENCFF487WEO 255392 ENCODE Processing Pipeline 4a6121d29f763e2669f6f26fd10cc0fc https://www.encodeproject.org/files/ENCFF992BIU/@@download/ENCFF992BIU.bed.gz GRCh38 released mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF562MWN bigBed narrowPeak conservative idr thresholded peaks ENCSR000EGB ChIP-seq EFO:0002067 K562 cell line Homo sapiens TBL1XR1-human ENCAB000ALQ DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF992BIU 475619 ENCODE Processing Pipeline e7a579ec253377c2fe3f9b5f216d0832 https://www.encodeproject.org/files/ENCFF562MWN/@@download/ENCFF562MWN.bigBed GRCh38 released mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF487WEO bed narrowPeak peaks ENCSR000EGB ChIP-seq EFO:0002067 K562 cell line Homo sapiens TBL1XR1-human ENCAB000ALQ DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF188QGH, ENCFF719NDH 6159793 ENCODE Processing Pipeline 4165e7a04706d12b67cde4429c706821 https://www.encodeproject.org/files/ENCFF487WEO/@@download/ENCFF487WEO.bed.gz GRCh38 released mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF435DZW bigBed narrowPeak peaks ENCSR000EGB ChIP-seq EFO:0002067 K562 cell line Homo sapiens TBL1XR1-human ENCAB000ALQ DNA see document see document False 2012-05-14 ENCODE 1 ENCFF400AUH 10985678 ENCODE Processing Pipeline 5122714be75e61bd91d902f24e2085a6 https://www.encodeproject.org/files/ENCFF435DZW/@@download/ENCFF435DZW.bigBed GRCh38 released mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF026RZR bigBed narrowPeak peaks ENCSR000EGB ChIP-seq EFO:0002067 K562 cell line Homo sapiens TBL1XR1-human ENCAB000ALQ DNA see document see document False 2012-05-14 ENCODE 2 ENCFF417VTJ 11091863 ENCODE Processing Pipeline 02ac684d2dce1225f4716847539ae23f https://www.encodeproject.org/files/ENCFF026RZR/@@download/ENCFF026RZR.bigBed GRCh38 released mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF805ZUL bigWig fold change over control ENCSR000EGB ChIP-seq EFO:0002067 K562 cell line Homo sapiens TBL1XR1-human ENCAB000ALQ DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF188QGH, ENCFF719NDH 807674200 ENCODE Processing Pipeline 67e68d7a2195c15738b04569458ee284 https://www.encodeproject.org/files/ENCFF805ZUL/@@download/ENCFF805ZUL.bigWig GRCh38 released mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF417VTJ bed narrowPeak peaks ENCSR000EGB ChIP-seq EFO:0002067 K562 cell line Homo sapiens TBL1XR1-human ENCAB000ALQ DNA see document see document False 2012-05-14 ENCODE 2 ENCFF719NDH 5148978 ENCODE Processing Pipeline b99fda23e3d932f7df6eca9baa7d036e https://www.encodeproject.org/files/ENCFF417VTJ/@@download/ENCFF417VTJ.bed.gz GRCh38 released mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF868SWL bed narrowPeak optimal idr thresholded peaks ENCSR000EGB ChIP-seq EFO:0002067 K562 cell line Homo sapiens TBL1XR1-human ENCAB000ALQ DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF400AUH, ENCFF417VTJ, ENCFF419RSJ, ENCFF487WEO 275587 ENCODE Processing Pipeline 36c7bcbb729dc172e1cf6fbe7620a435 https://www.encodeproject.org/files/ENCFF868SWL/@@download/ENCFF868SWL.bed.gz GRCh38 released mild to moderate bottlenecking, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF842TRZ bam unfiltered alignments ENCSR580IAO ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF197-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 50 ENCFF379LXN, ENCFF807MUK, ENCFF978YQI 840993186 ENCODE Processing Pipeline 25126dc081827d9402ef861a963cea12 https://www.encodeproject.org/files/ENCFF842TRZ/@@download/ENCFF842TRZ.bam hg19 released missing genetic modification characterization, low read depth ENCFF604BYO bam unfiltered alignments ENCSR580IAO ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF197-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 50 ENCFF807MUK, ENCFF814FHF, ENCFF841KDB 790053812 ENCODE Processing Pipeline e4953fc783c8c969e21b5e11cfeec5db https://www.encodeproject.org/files/ENCFF604BYO/@@download/ENCFF604BYO.bam hg19 released missing genetic modification characterization, low read depth ENCFF814FHF fastq reads ENCSR580IAO ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF197-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 1 50 single-ended 621796491 Kevin White, UChicago 1acbc197590cce33f7b3a29338e0f6aa SRA:SRR6213878 https://www.encodeproject.org/files/ENCFF814FHF/@@download/ENCFF814FHF.fastq.gz Illumina HiSeq 2500 /files/ENCFF159WTO/ released missing genetic modification characterization, low read depth ENCFF978YQI fastq reads ENCSR580IAO ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF197-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 1 50 single-ended 655926298 Kevin White, UChicago a7664b3ed1e1154d09419a3892747741 SRA:SRR6213880 https://www.encodeproject.org/files/ENCFF978YQI/@@download/ENCFF978YQI.fastq.gz Illumina HiSeq 2500 /files/ENCFF159WTO/ released missing genetic modification characterization, low read depth ENCFF841KDB fastq reads ENCSR580IAO ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF197-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 1 50 single-ended 99519554 Kevin White, UChicago 1d20ac8edcbd004b338ee649160996de SRA:SRR6213879 https://www.encodeproject.org/files/ENCFF841KDB/@@download/ENCFF841KDB.fastq.gz Illumina HiSeq 2000 /files/ENCFF159WTO/ released missing genetic modification characterization, low read depth ENCFF379LXN fastq reads ENCSR580IAO ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF197-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 1 50 single-ended 109466868 Kevin White, UChicago 24319377b532a2f26bdb61967b8db2e1 SRA:SRR6213881 https://www.encodeproject.org/files/ENCFF379LXN/@@download/ENCFF379LXN.fastq.gz Illumina HiSeq 2000 /files/ENCFF159WTO/ released missing genetic modification characterization, low read depth ENCFF764PZX bam alignments ENCSR580IAO ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF197-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 50 ENCFF379LXN, ENCFF807MUK, ENCFF978YQI 659448304 ENCODE Processing Pipeline 254f1cbbd19b531b098c1ec14c204cd0 https://www.encodeproject.org/files/ENCFF764PZX/@@download/ENCFF764PZX.bam hg19 released missing genetic modification characterization, low read depth ENCFF947CVN bam alignments ENCSR580IAO ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF197-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 50 ENCFF807MUK, ENCFF814FHF, ENCFF841KDB 614327383 ENCODE Processing Pipeline 3b8ced888df67bbd778fed0755ea5503 https://www.encodeproject.org/files/ENCFF947CVN/@@download/ENCFF947CVN.bam hg19 released missing genetic modification characterization, low read depth ENCFF973NIW bigWig signal p-value ENCSR580IAO ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF197-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF764PZX, ENCFF947CVN, ENCFF977MTW 631246773 ENCODE Processing Pipeline 835f0ae66e8e209bb5db4eec64d0f173 https://www.encodeproject.org/files/ENCFF973NIW/@@download/ENCFF973NIW.bigWig hg19 released missing genetic modification characterization, low read depth ENCFF622JMW bigWig signal p-value ENCSR580IAO ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF197-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF947CVN, ENCFF977MTW 462884194 ENCODE Processing Pipeline 8326d6398a031f6e3460bf0c371dcc31 https://www.encodeproject.org/files/ENCFF622JMW/@@download/ENCFF622JMW.bigWig hg19 released missing genetic modification characterization, low read depth ENCFF415KDK bigWig fold change over control ENCSR580IAO ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF197-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF947CVN, ENCFF977MTW 372136023 ENCODE Processing Pipeline aa2fb14be1c6face927bab525c83e5c3 https://www.encodeproject.org/files/ENCFF415KDK/@@download/ENCFF415KDK.bigWig hg19 released missing genetic modification characterization, low read depth ENCFF496HOU bigWig fold change over control ENCSR580IAO ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF197-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF764PZX, ENCFF947CVN, ENCFF977MTW 620610673 ENCODE Processing Pipeline 822e104f0ba906199c051abf8aba3544 https://www.encodeproject.org/files/ENCFF496HOU/@@download/ENCFF496HOU.bigWig hg19 released missing genetic modification characterization, low read depth ENCFF355WLJ bigWig signal p-value ENCSR580IAO ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF197-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF764PZX, ENCFF977MTW 521599985 ENCODE Processing Pipeline 8bc88ebb92bfc421c82a94746580a0ac https://www.encodeproject.org/files/ENCFF355WLJ/@@download/ENCFF355WLJ.bigWig hg19 released missing genetic modification characterization, low read depth ENCFF401TSJ bigWig fold change over control ENCSR580IAO ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF197-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF764PZX, ENCFF977MTW 399500588 ENCODE Processing Pipeline 271705405819d993b3d62f26c382321b https://www.encodeproject.org/files/ENCFF401TSJ/@@download/ENCFF401TSJ.bigWig hg19 released missing genetic modification characterization, low read depth ENCFF830WFG bigBed narrowPeak peaks ENCSR580IAO ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF197-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF061VCB 12862341 ENCODE Processing Pipeline d6d7fd54da19aa6d0469522a92d24de7 https://www.encodeproject.org/files/ENCFF830WFG/@@download/ENCFF830WFG.bigBed hg19 released missing genetic modification characterization, low read depth ENCFF820OCS bed narrowPeak peaks ENCSR580IAO ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF197-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF764PZX, ENCFF947CVN, ENCFF977MTW 6972441 ENCODE Processing Pipeline ae5666be81653ceec822d96358b12f0c https://www.encodeproject.org/files/ENCFF820OCS/@@download/ENCFF820OCS.bed.gz hg19 released missing genetic modification characterization, low read depth ENCFF061VCB bed narrowPeak peaks ENCSR580IAO ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF197-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF947CVN, ENCFF977MTW 6359309 ENCODE Processing Pipeline 3ec09c55ea1f7b4322b25ffae57fbbd1 https://www.encodeproject.org/files/ENCFF061VCB/@@download/ENCFF061VCB.bed.gz hg19 released missing genetic modification characterization, low read depth ENCFF866TCF bed narrowPeak peaks ENCSR580IAO ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF197-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF764PZX, ENCFF977MTW 6282247 ENCODE Processing Pipeline 5266e1b14addcb13437e5be3c60e2a4a https://www.encodeproject.org/files/ENCFF866TCF/@@download/ENCFF866TCF.bed.gz hg19 released missing genetic modification characterization, low read depth ENCFF635PHA bigBed narrowPeak peaks ENCSR580IAO ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF197-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF866TCF 12873592 ENCODE Processing Pipeline 6b8c9d2b646df44d766f9de638ab89fc https://www.encodeproject.org/files/ENCFF635PHA/@@download/ENCFF635PHA.bigBed hg19 released missing genetic modification characterization, low read depth ENCFF826YPF bigBed narrowPeak peaks ENCSR580IAO ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF197-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF820OCS 12818334 ENCODE Processing Pipeline 1b048c07a8b3d1f3ee57ec0984c5d105 https://www.encodeproject.org/files/ENCFF826YPF/@@download/ENCFF826YPF.bigBed hg19 released missing genetic modification characterization, low read depth ENCFF212GET bam unfiltered alignments ENCSR580IAO ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF197-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 50 ENCFF379LXN, ENCFF643CGH, ENCFF978YQI 843566615 ENCODE Processing Pipeline 109022ad30be112f8152c33b322a0901 https://www.encodeproject.org/files/ENCFF212GET/@@download/ENCFF212GET.bam GRCh38 released missing genetic modification characterization, low read depth ENCFF458OMJ bam unfiltered alignments ENCSR580IAO ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF197-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 50 ENCFF643CGH, ENCFF814FHF, ENCFF841KDB 792292876 ENCODE Processing Pipeline 24067140341af0110717de3718d56428 https://www.encodeproject.org/files/ENCFF458OMJ/@@download/ENCFF458OMJ.bam GRCh38 released missing genetic modification characterization, low read depth ENCFF687QLR bam alignments ENCSR580IAO ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF197-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 50 ENCFF643CGH, ENCFF814FHF, ENCFF841KDB 613900307 ENCODE Processing Pipeline 3398aa630c4f920f614978ac8b440647 https://www.encodeproject.org/files/ENCFF687QLR/@@download/ENCFF687QLR.bam GRCh38 released missing genetic modification characterization, low read depth ENCFF191EJM bam alignments ENCSR580IAO ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF197-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 50 ENCFF379LXN, ENCFF643CGH, ENCFF978YQI 658974040 ENCODE Processing Pipeline fed53bc02bbdfdda0f801c8688cbd5e1 https://www.encodeproject.org/files/ENCFF191EJM/@@download/ENCFF191EJM.bam GRCh38 released missing genetic modification characterization, low read depth ENCFF877EYQ bigWig signal p-value ENCSR580IAO ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF197-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF115YFR, ENCFF687QLR 497867682 ENCODE Processing Pipeline df4f2fc53319f6a2ded8e63d665964c0 https://www.encodeproject.org/files/ENCFF877EYQ/@@download/ENCFF877EYQ.bigWig GRCh38 released missing genetic modification characterization, low read depth ENCFF717MBE bigWig fold change over control ENCSR580IAO ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF197-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF115YFR, ENCFF687QLR 389683251 ENCODE Processing Pipeline fae1fb96d4fbad29a00733f80d17bf18 https://www.encodeproject.org/files/ENCFF717MBE/@@download/ENCFF717MBE.bigWig GRCh38 released missing genetic modification characterization, low read depth ENCFF080QEG bigWig signal p-value ENCSR580IAO ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF197-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF115YFR, ENCFF191EJM, ENCFF687QLR 640766582 ENCODE Processing Pipeline 9371044337ffb1e6e08c56ceab8f42c2 https://www.encodeproject.org/files/ENCFF080QEG/@@download/ENCFF080QEG.bigWig GRCh38 released missing genetic modification characterization, low read depth ENCFF690JPX bigWig signal p-value ENCSR580IAO ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF197-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF115YFR, ENCFF191EJM 528609741 ENCODE Processing Pipeline e9fd7cb47c162bfb2c9c8e13439f9d4f https://www.encodeproject.org/files/ENCFF690JPX/@@download/ENCFF690JPX.bigWig GRCh38 released missing genetic modification characterization, low read depth ENCFF052CLG bigWig fold change over control ENCSR580IAO ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF197-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF115YFR, ENCFF191EJM 398461205 ENCODE Processing Pipeline 80592b0007070267aa439b23e034797e https://www.encodeproject.org/files/ENCFF052CLG/@@download/ENCFF052CLG.bigWig GRCh38 released missing genetic modification characterization, low read depth ENCFF563CUY bigWig fold change over control ENCSR580IAO ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF197-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF115YFR, ENCFF191EJM, ENCFF687QLR 627393042 ENCODE Processing Pipeline 27d7e85d5199eea886c946754435f5a8 https://www.encodeproject.org/files/ENCFF563CUY/@@download/ENCFF563CUY.bigWig GRCh38 released missing genetic modification characterization, low read depth ENCFF508PVH bed narrowPeak peaks ENCSR580IAO ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF197-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF115YFR, ENCFF687QLR 6202262 ENCODE Processing Pipeline d629a3b5e8680573c197930792f42565 https://www.encodeproject.org/files/ENCFF508PVH/@@download/ENCFF508PVH.bed.gz GRCh38 released missing genetic modification characterization, low read depth ENCFF991YRK bed narrowPeak peaks ENCSR580IAO ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF197-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF115YFR, ENCFF191EJM 6073686 ENCODE Processing Pipeline 745e75a1f4c905160243c9c517dba314 https://www.encodeproject.org/files/ENCFF991YRK/@@download/ENCFF991YRK.bed.gz GRCh38 released missing genetic modification characterization, low read depth ENCFF757JLA bed narrowPeak peaks ENCSR580IAO ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF197-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF115YFR, ENCFF191EJM, ENCFF687QLR 6827776 ENCODE Processing Pipeline e644636532c450a2487d99a9a949e823 https://www.encodeproject.org/files/ENCFF757JLA/@@download/ENCFF757JLA.bed.gz GRCh38 released missing genetic modification characterization, low read depth ENCFF158SEE bigBed narrowPeak peaks ENCSR580IAO ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF197-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF508PVH 12863369 ENCODE Processing Pipeline d27b7190d3481459d248ea9d86327e96 https://www.encodeproject.org/files/ENCFF158SEE/@@download/ENCFF158SEE.bigBed GRCh38 released missing genetic modification characterization, low read depth ENCFF928XUE bigBed narrowPeak peaks ENCSR580IAO ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF197-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF991YRK 12848397 ENCODE Processing Pipeline dd08670b5173c2aece1217e1dcbe0576 https://www.encodeproject.org/files/ENCFF928XUE/@@download/ENCFF928XUE.bigBed GRCh38 released missing genetic modification characterization, low read depth ENCFF545HVR bigBed narrowPeak peaks ENCSR580IAO ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF197-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF757JLA 12827838 ENCODE Processing Pipeline 0b8daa873fa6b8cff52a75432ee2626e https://www.encodeproject.org/files/ENCFF545HVR/@@download/ENCFF545HVR.bigBed GRCh38 released missing genetic modification characterization, low read depth ENCFF165GSE bed narrowPeak optimal idr thresholded peaks ENCSR580IAO ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF197-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF419RSJ, ENCFF508PVH, ENCFF757JLA, ENCFF991YRK 198673 ENCODE Processing Pipeline 2149e2bff9cdd51af53a0c0635250c02 https://www.encodeproject.org/files/ENCFF165GSE/@@download/ENCFF165GSE.bed.gz GRCh38 released missing genetic modification characterization, low read depth ENCFF299SDS bigBed narrowPeak optimal idr thresholded peaks ENCSR580IAO ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF197-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF165GSE 507554 ENCODE Processing Pipeline dc5a88353bb9ed541c66546c70ca7704 https://www.encodeproject.org/files/ENCFF299SDS/@@download/ENCFF299SDS.bigBed GRCh38 released missing genetic modification characterization, low read depth ENCFF040AYZ bigBed narrowPeak optimal idr thresholded peaks ENCSR580IAO ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF197-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF853TZC 310247 ENCODE Processing Pipeline 6d9e0349c0f775edb38856006bfad39b https://www.encodeproject.org/files/ENCFF040AYZ/@@download/ENCFF040AYZ.bigBed hg19 released missing genetic modification characterization, low read depth ENCFF853TZC bed narrowPeak optimal idr thresholded peaks ENCSR580IAO ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-ZNF197-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF001TDO, ENCFF061VCB, ENCFF820OCS, ENCFF866TCF 161658 ENCODE Processing Pipeline 76dff59260974ea4959eabcd3f275a6a https://www.encodeproject.org/files/ENCFF853TZC/@@download/ENCFF853TZC.bed.gz hg19 released missing genetic modification characterization, low read depth ENCFF000YNJ bam alignments ENCSR000EWG ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATA2-human ENCAB000AGT DNA see document see document False 2011-10-29 ENCODE 1 ENCFF000YNY 704562530 Peggy Farnham, USC 83006e3d8d4e38f9e8a92afd099f557c https://www.encodeproject.org/files/ENCFF000YNJ/@@download/ENCFF000YNJ.bam hg19 archived biological replicates with identical biosample insufficient replicate concordance, insufficient read length, insufficient read depth ENCFF000YNK bam alignments ENCSR000EWG ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATA2-human ENCAB000AGT DNA see document see document False 2011-10-29 ENCODE 2 ENCFF000YNZ 753698993 Peggy Farnham, USC 195bdcb676a383f272e8760c9588ecf8 https://www.encodeproject.org/files/ENCFF000YNK/@@download/ENCFF000YNK.bam hg19 archived biological replicates with identical biosample insufficient replicate concordance, insufficient read length, insufficient read depth ENCFF000YNN bigWig signal ENCSR000EWG ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATA2-human ENCAB000AGT DNA see document see document False 2011-10-29 ENCODE 347811688 Peggy Farnham, USC 3eb997e7061343be6b4e54a188fc5b21 https://www.encodeproject.org/files/ENCFF000YNN/@@download/ENCFF000YNN.bigWig hg19 archived biological replicates with identical biosample, missing derived_from insufficient replicate concordance, insufficient read length, insufficient read depth ENCFF000YNO bigBed narrowPeak peaks ENCSR000EWG ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATA2-human ENCAB000AGT DNA see document see document False 2011-10-29 ENCODE ENCFF001VNE 358612 Peggy Farnham, USC 3fa531b3cc4ef065724a1c0531de2562 https://www.encodeproject.org/files/ENCFF000YNO/@@download/ENCFF000YNO.bigBed hg19 archived biological replicates with identical biosample insufficient replicate concordance, insufficient read length, insufficient read depth ENCFF000YNY fastq reads ENCSR000EWG ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATA2-human ENCAB000AGT DNA see document see document False 2011-10-29 ENCODE 1 1 32 single-ended 541825410 Peggy Farnham, USC 0466385322288dd0f1e663828188c369 https://www.encodeproject.org/files/ENCFF000YNY/@@download/ENCFF000YNY.fastq.gz Illumina Genome Analyzer /files/ENCFF000VEK/ released inconsistent control read length biological replicates with identical biosample insufficient replicate concordance, insufficient read length, insufficient read depth ENCFF000YNZ fastq reads ENCSR000EWG ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATA2-human ENCAB000AGT DNA see document see document False 2011-10-29 ENCODE 2 1 32 single-ended 576686589 Peggy Farnham, USC 3fe2825e6560a35e00c6552072d864af https://www.encodeproject.org/files/ENCFF000YNZ/@@download/ENCFF000YNZ.fastq.gz Illumina Genome Analyzer /files/ENCFF000VEK/ released inconsistent control read length biological replicates with identical biosample insufficient replicate concordance, insufficient read length, insufficient read depth ENCFF001VNE bed narrowPeak peaks ENCSR000EWG ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATA2-human ENCAB000AGT DNA see document see document False 2011-10-29 ENCODE 124606 Peggy Farnham, USC d7f7e77f95b44fbe690dfb976de51a5a https://www.encodeproject.org/files/ENCFF001VNE/@@download/ENCFF001VNE.bed.gz hg19 archived biological replicates with identical biosample, missing derived_from insufficient replicate concordance, insufficient read length, insufficient read depth ENCFF002CWQ bed narrowPeak optimal idr thresholded peaks ENCSR000EWG ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATA2-human ENCAB000AGT DNA see document see document False 2011-10-29 ENCODE 209407 ENCODE Consortium Analysis Working Group 36c61da27aae1632856794e5867b58b3 https://www.encodeproject.org/files/ENCFF002CWQ/@@download/ENCFF002CWQ.bed.gz hg19 archived biological replicates with identical biosample, missing derived_from insufficient replicate concordance, insufficient read length, insufficient read depth ENCFF150JOH bigBed narrowPeak optimal idr thresholded peaks ENCSR000EWG ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATA2-human ENCAB000AGT DNA see document see document False 2011-10-29 ENCODE ENCFF002CWQ 421738 ENCODE Consortium b47f2906d3ab4c334a01946a5c1dd106 https://www.encodeproject.org/files/ENCFF150JOH/@@download/ENCFF150JOH.bigBed hg19 archived biological replicates with identical biosample insufficient replicate concordance, insufficient read length, insufficient read depth ENCFF252WPQ bam unfiltered alignments ENCSR000EWG ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATA2-human ENCAB000AGT DNA see document see document False 2011-10-29 ENCODE 1 32 ENCFF000YNY, ENCFF643CGH 707160552 ENCODE Processing Pipeline 61699d434e9a142c78934b9fd7049f5a https://www.encodeproject.org/files/ENCFF252WPQ/@@download/ENCFF252WPQ.bam GRCh38 released biological replicates with identical biosample insufficient replicate concordance, insufficient read length, insufficient read depth ENCFF829VOR bed narrowPeak peaks ENCSR000EWG ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATA2-human ENCAB000AGT DNA see document see document False 2011-10-29 ENCODE 2 ENCFF340JWK, ENCFF355SGP 2807656 ENCODE Processing Pipeline 034d781a3942a300075bd95cfb274084 https://www.encodeproject.org/files/ENCFF829VOR/@@download/ENCFF829VOR.bed.gz GRCh38 released biological replicates with identical biosample insufficient replicate concordance, insufficient read length, insufficient read depth ENCFF224NNV bed narrowPeak peaks ENCSR000EWG ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATA2-human ENCAB000AGT DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF340JWK, ENCFF355SGP, ENCFF779CRV 5002808 ENCODE Processing Pipeline 8f066b0e916b306aa90dc8a591f6b6a1 https://www.encodeproject.org/files/ENCFF224NNV/@@download/ENCFF224NNV.bed.gz GRCh38 released biological replicates with identical biosample insufficient replicate concordance, insufficient read length, insufficient read depth ENCFF654HDB bigBed narrowPeak peaks ENCSR000EWG ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATA2-human ENCAB000AGT DNA see document see document False 2011-10-29 ENCODE 2 ENCFF829VOR 6072388 ENCODE Processing Pipeline db72d7e43f650bde2f26bb6a29992e2c https://www.encodeproject.org/files/ENCFF654HDB/@@download/ENCFF654HDB.bigBed GRCh38 released biological replicates with identical biosample insufficient replicate concordance, insufficient read length, insufficient read depth ENCFF340JWK bam alignments ENCSR000EWG ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATA2-human ENCAB000AGT DNA see document see document False 2011-10-29 ENCODE 2 32 ENCFF000YNZ, ENCFF643CGH 359755177 ENCODE Processing Pipeline 73d6aa313a2989308ff4864895fcfee5 https://www.encodeproject.org/files/ENCFF340JWK/@@download/ENCFF340JWK.bam GRCh38 released biological replicates with identical biosample insufficient replicate concordance, insufficient read length, insufficient read depth ENCFF441UQW bigWig fold change over control ENCSR000EWG ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATA2-human ENCAB000AGT DNA see document see document False 2011-10-29 ENCODE 1 ENCFF355SGP, ENCFF779CRV 202442376 ENCODE Processing Pipeline b84361b2119faf488c82557be840995d https://www.encodeproject.org/files/ENCFF441UQW/@@download/ENCFF441UQW.bigWig GRCh38 released biological replicates with identical biosample insufficient replicate concordance, insufficient read length, insufficient read depth ENCFF781FFF bigWig fold change over control ENCSR000EWG ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATA2-human ENCAB000AGT DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF340JWK, ENCFF355SGP, ENCFF779CRV 342830991 ENCODE Processing Pipeline 0a3b972d6b2a46451cb01c142c29233b https://www.encodeproject.org/files/ENCFF781FFF/@@download/ENCFF781FFF.bigWig GRCh38 released biological replicates with identical biosample insufficient replicate concordance, insufficient read length, insufficient read depth ENCFF440KMN bed narrowPeak conservative idr thresholded peaks ENCSR000EWG ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATA2-human ENCAB000AGT DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF224NNV, ENCFF419RSJ, ENCFF510BVA, ENCFF829VOR 74680 ENCODE Processing Pipeline a935b660b0dc6d69044c43bf15f3c914 https://www.encodeproject.org/files/ENCFF440KMN/@@download/ENCFF440KMN.bed.gz GRCh38 released biological replicates with identical biosample insufficient replicate concordance, insufficient read length, insufficient read depth ENCFF173TXA bed narrowPeak optimal idr thresholded peaks ENCSR000EWG ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATA2-human ENCAB000AGT DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF224NNV, ENCFF419RSJ, ENCFF510BVA, ENCFF829VOR 185059 ENCODE Processing Pipeline c395f505b604dfc3a2e6759e674e5857 https://www.encodeproject.org/files/ENCFF173TXA/@@download/ENCFF173TXA.bed.gz GRCh38 released biological replicates with identical biosample insufficient replicate concordance, insufficient read length, insufficient read depth ENCFF847QQW bigWig signal p-value ENCSR000EWG ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATA2-human ENCAB000AGT DNA see document see document False 2011-10-29 ENCODE 1 ENCFF355SGP, ENCFF779CRV 364633911 ENCODE Processing Pipeline 5ce3131d6c4e50cd62909a217fdd71f2 https://www.encodeproject.org/files/ENCFF847QQW/@@download/ENCFF847QQW.bigWig GRCh38 released biological replicates with identical biosample insufficient replicate concordance, insufficient read length, insufficient read depth ENCFF779CRV bam alignments ENCSR000EWG ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATA2-human ENCAB000AGT DNA see document see document False 2011-10-29 ENCODE 1 32 ENCFF000YNY, ENCFF643CGH 361753558 ENCODE Processing Pipeline 5bac9acabf257870b0dcc4a40cf81ad5 https://www.encodeproject.org/files/ENCFF779CRV/@@download/ENCFF779CRV.bam GRCh38 released biological replicates with identical biosample insufficient replicate concordance, insufficient read length, insufficient read depth ENCFF259SDS bam unfiltered alignments ENCSR000EWG ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATA2-human ENCAB000AGT DNA see document see document False 2011-10-29 ENCODE 2 32 ENCFF000YNZ, ENCFF643CGH 755993185 ENCODE Processing Pipeline 0e75540dc5f13f3b410d32a10a9286a4 https://www.encodeproject.org/files/ENCFF259SDS/@@download/ENCFF259SDS.bam GRCh38 released biological replicates with identical biosample insufficient replicate concordance, insufficient read length, insufficient read depth ENCFF019HZN bigWig signal p-value ENCSR000EWG ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATA2-human ENCAB000AGT DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF340JWK, ENCFF355SGP, ENCFF779CRV 457836931 ENCODE Processing Pipeline 8ecb30c8e0d4a2d8bdffb5d2b6649ad2 https://www.encodeproject.org/files/ENCFF019HZN/@@download/ENCFF019HZN.bigWig GRCh38 released biological replicates with identical biosample insufficient replicate concordance, insufficient read length, insufficient read depth ENCFF362RCK bigWig fold change over control ENCSR000EWG ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATA2-human ENCAB000AGT DNA see document see document False 2011-10-29 ENCODE 2 ENCFF340JWK, ENCFF355SGP 147962097 ENCODE Processing Pipeline d7f7d32cf7456a281578504fb5fbcf3c https://www.encodeproject.org/files/ENCFF362RCK/@@download/ENCFF362RCK.bigWig GRCh38 released biological replicates with identical biosample insufficient replicate concordance, insufficient read length, insufficient read depth ENCFF223INH bigBed narrowPeak peaks ENCSR000EWG ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATA2-human ENCAB000AGT DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF224NNV 10932693 ENCODE Processing Pipeline 66909e56650c48bcc2d70deba6653f38 https://www.encodeproject.org/files/ENCFF223INH/@@download/ENCFF223INH.bigBed GRCh38 released biological replicates with identical biosample insufficient replicate concordance, insufficient read length, insufficient read depth ENCFF827ENU bigBed narrowPeak optimal idr thresholded peaks ENCSR000EWG ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATA2-human ENCAB000AGT DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF173TXA 394290 ENCODE Processing Pipeline 99ec60287a0b70327fa7981e53900bc6 https://www.encodeproject.org/files/ENCFF827ENU/@@download/ENCFF827ENU.bigBed GRCh38 released biological replicates with identical biosample insufficient replicate concordance, insufficient read length, insufficient read depth ENCFF510BVA bed narrowPeak peaks ENCSR000EWG ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATA2-human ENCAB000AGT DNA see document see document False 2011-10-29 ENCODE 1 ENCFF355SGP, ENCFF779CRV 4116494 ENCODE Processing Pipeline 6ea655dbcbd66b25fbd1057e53281e70 https://www.encodeproject.org/files/ENCFF510BVA/@@download/ENCFF510BVA.bed.gz GRCh38 released biological replicates with identical biosample insufficient replicate concordance, insufficient read length, insufficient read depth ENCFF320BBP bigBed narrowPeak peaks ENCSR000EWG ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATA2-human ENCAB000AGT DNA see document see document False 2011-10-29 ENCODE 1 ENCFF510BVA 9540623 ENCODE Processing Pipeline cf66e399a87de07437f390df330e00eb https://www.encodeproject.org/files/ENCFF320BBP/@@download/ENCFF320BBP.bigBed GRCh38 released biological replicates with identical biosample insufficient replicate concordance, insufficient read length, insufficient read depth ENCFF475QTZ bigBed narrowPeak conservative idr thresholded peaks ENCSR000EWG ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATA2-human ENCAB000AGT DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF440KMN 181553 ENCODE Processing Pipeline 74cfcb7432933a8543dd0edf704395ad https://www.encodeproject.org/files/ENCFF475QTZ/@@download/ENCFF475QTZ.bigBed GRCh38 released biological replicates with identical biosample insufficient replicate concordance, insufficient read length, insufficient read depth ENCFF864IKU bigWig signal p-value ENCSR000EWG ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATA2-human ENCAB000AGT DNA see document see document False 2011-10-29 ENCODE 2 ENCFF340JWK, ENCFF355SGP 463316310 ENCODE Processing Pipeline fa8cb3c7d2fb3bd7f3c4b0e30d04dc69 https://www.encodeproject.org/files/ENCFF864IKU/@@download/ENCFF864IKU.bigWig GRCh38 released biological replicates with identical biosample insufficient replicate concordance, insufficient read length, insufficient read depth ENCFF896RKY bam unfiltered alignments ENCSR000EWG ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATA2-human ENCAB000AGT DNA see document see document False 2011-10-29 ENCODE 1 32 ENCFF000YNY, ENCFF807MUK 705497799 ENCODE Processing Pipeline efb32a58ec6cc0e4f354299d72e66d4f https://www.encodeproject.org/files/ENCFF896RKY/@@download/ENCFF896RKY.bam hg19 released biological replicates with identical biosample insufficient replicate concordance, insufficient read length, insufficient read depth ENCFF990JRT bam alignments ENCSR000EWG ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATA2-human ENCAB000AGT DNA see document see document False 2011-10-29 ENCODE 1 32 ENCFF000YNY, ENCFF807MUK 362157879 ENCODE Processing Pipeline 6271700d48d736a457c31ab5df5a2745 https://www.encodeproject.org/files/ENCFF990JRT/@@download/ENCFF990JRT.bam hg19 released biological replicates with identical biosample insufficient replicate concordance, insufficient read length, insufficient read depth ENCFF778HCA bam alignments ENCSR000EWG ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATA2-human ENCAB000AGT DNA see document see document False 2011-10-29 ENCODE 2 32 ENCFF000YNZ, ENCFF807MUK 360015772 ENCODE Processing Pipeline be39b4edc4c7a2e7b1c2248a710c464f https://www.encodeproject.org/files/ENCFF778HCA/@@download/ENCFF778HCA.bam hg19 released biological replicates with identical biosample insufficient replicate concordance, insufficient read length, insufficient read depth ENCFF543ZGZ bigWig signal p-value ENCSR000EWG ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATA2-human ENCAB000AGT DNA see document see document False 2011-10-29 ENCODE 1 ENCFF051ZZR, ENCFF990JRT 345756474 ENCODE Processing Pipeline c81913c08ea46f39d156f2b4e8463fca https://www.encodeproject.org/files/ENCFF543ZGZ/@@download/ENCFF543ZGZ.bigWig hg19 released biological replicates with identical biosample insufficient replicate concordance, insufficient read length, insufficient read depth ENCFF706HJR bigWig signal p-value ENCSR000EWG ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATA2-human ENCAB000AGT DNA see document see document False 2011-10-29 ENCODE 2 ENCFF051ZZR, ENCFF778HCA 396624681 ENCODE Processing Pipeline be7e934927d36753c0212bb5b2deb6f7 https://www.encodeproject.org/files/ENCFF706HJR/@@download/ENCFF706HJR.bigWig hg19 released biological replicates with identical biosample insufficient replicate concordance, insufficient read length, insufficient read depth ENCFF850TLB bigWig fold change over control ENCSR000EWG ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATA2-human ENCAB000AGT DNA see document see document False 2011-10-29 ENCODE 2 ENCFF051ZZR, ENCFF778HCA 148441951 ENCODE Processing Pipeline c82f898714616b4e48c4e629c6679df9 https://www.encodeproject.org/files/ENCFF850TLB/@@download/ENCFF850TLB.bigWig hg19 released biological replicates with identical biosample insufficient replicate concordance, insufficient read length, insufficient read depth ENCFF716IDC bigBed narrowPeak peaks ENCSR000EWG ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATA2-human ENCAB000AGT DNA see document see document False 2011-10-29 ENCODE 1 ENCFF061TTI 9561263 ENCODE Processing Pipeline 40e702e9c06d5f609dce87a548e65aae https://www.encodeproject.org/files/ENCFF716IDC/@@download/ENCFF716IDC.bigBed hg19 released biological replicates with identical biosample insufficient replicate concordance, insufficient read length, insufficient read depth ENCFF407RUQ bigWig fold change over control ENCSR000EWG ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATA2-human ENCAB000AGT DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF051ZZR, ENCFF778HCA, ENCFF990JRT 349894995 ENCODE Processing Pipeline a6535aa86feb563dea2e14e9e61777f5 https://www.encodeproject.org/files/ENCFF407RUQ/@@download/ENCFF407RUQ.bigWig hg19 released biological replicates with identical biosample insufficient replicate concordance, insufficient read length, insufficient read depth ENCFF358BOB bam unfiltered alignments ENCSR000EWG ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATA2-human ENCAB000AGT DNA see document see document False 2011-10-29 ENCODE 2 32 ENCFF000YNZ, ENCFF807MUK 754520198 ENCODE Processing Pipeline 285b51da69ac9bb93129db5d29bd013f https://www.encodeproject.org/files/ENCFF358BOB/@@download/ENCFF358BOB.bam hg19 released biological replicates with identical biosample insufficient replicate concordance, insufficient read length, insufficient read depth ENCFF866WJN bigWig signal p-value ENCSR000EWG ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATA2-human ENCAB000AGT DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF051ZZR, ENCFF778HCA, ENCFF990JRT 501715344 ENCODE Processing Pipeline 1c40c69dfbee96251ba8c24e737c7e45 https://www.encodeproject.org/files/ENCFF866WJN/@@download/ENCFF866WJN.bigWig hg19 released biological replicates with identical biosample insufficient replicate concordance, insufficient read length, insufficient read depth ENCFF732HOE bed narrowPeak optimal idr thresholded peaks ENCSR000EWG ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATA2-human ENCAB000AGT DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF001TDO, ENCFF061TTI, ENCFF163ZFQ, ENCFF717ZNF 185950 ENCODE Processing Pipeline 0a5986cb974e654436fe293de05e5274 https://www.encodeproject.org/files/ENCFF732HOE/@@download/ENCFF732HOE.bed.gz hg19 released biological replicates with identical biosample insufficient replicate concordance, insufficient read length, insufficient read depth ENCFF642ZZB bigWig fold change over control ENCSR000EWG ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATA2-human ENCAB000AGT DNA see document see document False 2011-10-29 ENCODE 1 ENCFF051ZZR, ENCFF990JRT 206174966 ENCODE Processing Pipeline 387a62df7218d7aa5afe68ff936b07f8 https://www.encodeproject.org/files/ENCFF642ZZB/@@download/ENCFF642ZZB.bigWig hg19 released biological replicates with identical biosample insufficient replicate concordance, insufficient read length, insufficient read depth ENCFF717ZNF bed narrowPeak peaks ENCSR000EWG ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATA2-human ENCAB000AGT DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF051ZZR, ENCFF778HCA, ENCFF990JRT 5049856 ENCODE Processing Pipeline 4b8b4d5a7dc25ccddf6939ee2c2f2b65 https://www.encodeproject.org/files/ENCFF717ZNF/@@download/ENCFF717ZNF.bed.gz hg19 released biological replicates with identical biosample insufficient replicate concordance, insufficient read length, insufficient read depth ENCFF350KQQ bigBed narrowPeak peaks ENCSR000EWG ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATA2-human ENCAB000AGT DNA see document see document False 2011-10-29 ENCODE 2 ENCFF163ZFQ 6076431 ENCODE Processing Pipeline 36f1182fb21d03fc4314dd1449270330 https://www.encodeproject.org/files/ENCFF350KQQ/@@download/ENCFF350KQQ.bigBed hg19 released biological replicates with identical biosample insufficient replicate concordance, insufficient read length, insufficient read depth ENCFF727SRR bed narrowPeak conservative idr thresholded peaks ENCSR000EWG ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATA2-human ENCAB000AGT DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF001TDO, ENCFF061TTI, ENCFF163ZFQ, ENCFF717ZNF 74527 ENCODE Processing Pipeline 37886e11895c8e10ce30d0389d587035 https://www.encodeproject.org/files/ENCFF727SRR/@@download/ENCFF727SRR.bed.gz hg19 released biological replicates with identical biosample insufficient replicate concordance, insufficient read length, insufficient read depth ENCFF342ILG bigBed narrowPeak conservative idr thresholded peaks ENCSR000EWG ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATA2-human ENCAB000AGT DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF727SRR 181335 ENCODE Processing Pipeline af0ec9817e97b52fc17d2c5cd5d89cf3 https://www.encodeproject.org/files/ENCFF342ILG/@@download/ENCFF342ILG.bigBed hg19 released biological replicates with identical biosample insufficient replicate concordance, insufficient read length, insufficient read depth ENCFF919CIV bigBed narrowPeak optimal idr thresholded peaks ENCSR000EWG ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATA2-human ENCAB000AGT DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF732HOE 394477 ENCODE Processing Pipeline 3ad546e93813b37ec95e30221f2b7f32 https://www.encodeproject.org/files/ENCFF919CIV/@@download/ENCFF919CIV.bigBed hg19 released biological replicates with identical biosample insufficient replicate concordance, insufficient read length, insufficient read depth ENCFF061TTI bed narrowPeak peaks ENCSR000EWG ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATA2-human ENCAB000AGT DNA see document see document False 2011-10-29 ENCODE 1 ENCFF051ZZR, ENCFF990JRT 4134004 ENCODE Processing Pipeline 460d8efe582bd8ac3d839aaaa1cb871e https://www.encodeproject.org/files/ENCFF061TTI/@@download/ENCFF061TTI.bed.gz hg19 released biological replicates with identical biosample insufficient replicate concordance, insufficient read length, insufficient read depth ENCFF163ZFQ bed narrowPeak peaks ENCSR000EWG ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATA2-human ENCAB000AGT DNA see document see document False 2011-10-29 ENCODE 2 ENCFF051ZZR, ENCFF778HCA 2818433 ENCODE Processing Pipeline c6f4e290a05030a7b7d4cb89d6b57354 https://www.encodeproject.org/files/ENCFF163ZFQ/@@download/ENCFF163ZFQ.bed.gz hg19 released biological replicates with identical biosample insufficient replicate concordance, insufficient read length, insufficient read depth ENCFF754NTO bigBed narrowPeak peaks ENCSR000EWG ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATA2-human ENCAB000AGT DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF717ZNF 10948931 ENCODE Processing Pipeline 48c9de9d92529ce79c359c99e1b8fef4 https://www.encodeproject.org/files/ENCFF754NTO/@@download/ENCFF754NTO.bigBed hg19 released biological replicates with identical biosample insufficient replicate concordance, insufficient read length, insufficient read depth ENCFF634HPP bam unfiltered alignments ENCSR563YDA ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDGF-human ENCAB691BTB DNA False 2016-06-13 ENCODE 2 100 ENCFF214MWL, ENCFF664YJD, ENCFF807MUK 6177746514 ENCODE Processing Pipeline 7563cb7b072d45ae2fe7a16b88a8da09 https://www.encodeproject.org/files/ENCFF634HPP/@@download/ENCFF634HPP.bam hg19 released ENCFF771ZUM bam unfiltered alignments ENCSR563YDA ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDGF-human ENCAB691BTB DNA False 2016-06-13 ENCODE 1 100 ENCFF324VNE, ENCFF598OBQ, ENCFF807MUK 4456670446 ENCODE Processing Pipeline 64365aa032f77fbd87ce84e64871b9f8 https://www.encodeproject.org/files/ENCFF771ZUM/@@download/ENCFF771ZUM.bam hg19 released ENCFF598OBQ fastq reads ENCSR563YDA ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDGF-human ENCAB691BTB DNA False 2016-06-13 ENCODE 1 1 100 paired-ended 1 ENCFF324VNE 1969199303 Michael Snyder, Stanford a3f8113dcea69188bfb15c73d2ccee16 SRA:SRR5111786 https://www.encodeproject.org/files/ENCFF598OBQ/@@download/ENCFF598OBQ.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFF/ released ENCFF214MWL fastq reads ENCSR563YDA ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDGF-human ENCAB691BTB DNA False 2016-06-13 ENCODE 2 1 100 paired-ended 2 ENCFF664YJD 2861588553 Michael Snyder, Stanford a05a159eb6d4c5823f02fee699621c6b SRA:SRR5111785 https://www.encodeproject.org/files/ENCFF214MWL/@@download/ENCFF214MWL.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFA/ released ENCFF664YJD fastq reads ENCSR563YDA ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDGF-human ENCAB691BTB DNA False 2016-06-13 ENCODE 2 1 100 paired-ended 1 ENCFF214MWL 2747127472 Michael Snyder, Stanford 72920b0881dc3e715e191a381c43b410 SRA:SRR5111785 https://www.encodeproject.org/files/ENCFF664YJD/@@download/ENCFF664YJD.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFD/ released ENCFF324VNE fastq reads ENCSR563YDA ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDGF-human ENCAB691BTB DNA False 2016-06-13 ENCODE 1 1 100 paired-ended 2 ENCFF598OBQ 2054983420 Michael Snyder, Stanford 094daa008ad8a6de6aa9ca01d0bfbf9c SRA:SRR5111786 https://www.encodeproject.org/files/ENCFF324VNE/@@download/ENCFF324VNE.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFH/ released ENCFF204DQZ bam alignments ENCSR563YDA ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDGF-human ENCAB691BTB DNA False 2016-06-13 ENCODE 2 100 ENCFF214MWL, ENCFF664YJD, ENCFF807MUK 4867192478 ENCODE Processing Pipeline 1166992b99b8f16793987b404670ebda https://www.encodeproject.org/files/ENCFF204DQZ/@@download/ENCFF204DQZ.bam hg19 released ENCFF073BGI bam alignments ENCSR563YDA ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDGF-human ENCAB691BTB DNA False 2016-06-13 ENCODE 1 100 ENCFF324VNE, ENCFF598OBQ, ENCFF807MUK 3928499421 ENCODE Processing Pipeline a9d4533d0f50b42c5715d8d6d0bc436e https://www.encodeproject.org/files/ENCFF073BGI/@@download/ENCFF073BGI.bam hg19 released ENCFF437QWN bigWig signal p-value ENCSR563YDA ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDGF-human ENCAB691BTB DNA False 2016-06-13 ENCODE 2 ENCFF051LWI, ENCFF204DQZ 1119299148 ENCODE Processing Pipeline fa481f28a6ce44b8b84e5133e0067934 https://www.encodeproject.org/files/ENCFF437QWN/@@download/ENCFF437QWN.bigWig hg19 released ENCFF866XBU bigWig fold change over control ENCSR563YDA ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDGF-human ENCAB691BTB DNA False 2016-06-13 ENCODE 2 ENCFF051LWI, ENCFF204DQZ 1244894870 ENCODE Processing Pipeline 78632a95ac47b75b9bbbc66357e67afd https://www.encodeproject.org/files/ENCFF866XBU/@@download/ENCFF866XBU.bigWig hg19 released ENCFF603HFB bam unfiltered alignments ENCSR563YDA ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDGF-human ENCAB691BTB DNA False 2016-06-13 ENCODE 1 100 ENCFF324VNE, ENCFF598OBQ, ENCFF643CGH 4461680958 ENCODE Processing Pipeline 85c848f9c1b5ff28c58610d830c51dda https://www.encodeproject.org/files/ENCFF603HFB/@@download/ENCFF603HFB.bam GRCh38 released ENCFF878BKO bam unfiltered alignments ENCSR563YDA ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDGF-human ENCAB691BTB DNA False 2016-06-13 ENCODE 2 100 ENCFF214MWL, ENCFF643CGH, ENCFF664YJD 6184667004 ENCODE Processing Pipeline 4adebec1b45ab242f42bf184a4f79e54 https://www.encodeproject.org/files/ENCFF878BKO/@@download/ENCFF878BKO.bam GRCh38 released ENCFF769DDY bam alignments ENCSR563YDA ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDGF-human ENCAB691BTB DNA False 2016-06-13 ENCODE 1 100 ENCFF324VNE, ENCFF598OBQ, ENCFF643CGH 3931401851 ENCODE Processing Pipeline 2505b77d11ca0befa372363d4c6f08af https://www.encodeproject.org/files/ENCFF769DDY/@@download/ENCFF769DDY.bam GRCh38 released ENCFF221CPW bam alignments ENCSR563YDA ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDGF-human ENCAB691BTB DNA False 2016-06-13 ENCODE 2 100 ENCFF214MWL, ENCFF643CGH, ENCFF664YJD 4870220233 ENCODE Processing Pipeline 2db17521cc3875be5a0f76a9f08a7a1e https://www.encodeproject.org/files/ENCFF221CPW/@@download/ENCFF221CPW.bam GRCh38 released ENCFF835XYY bigWig signal p-value ENCSR563YDA ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDGF-human ENCAB691BTB DNA False 2016-06-13 ENCODE 1 ENCFF769DDY, ENCFF910IKB 1320006965 ENCODE Processing Pipeline 0dc62a67015b6447e9a780b6dc58a2bf https://www.encodeproject.org/files/ENCFF835XYY/@@download/ENCFF835XYY.bigWig GRCh38 released ENCFF559BHR bigWig signal p-value ENCSR563YDA ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDGF-human ENCAB691BTB DNA False 2016-06-13 ENCODE 2 ENCFF221CPW, ENCFF227IZS 1106793658 ENCODE Processing Pipeline b41840da1d5d9b7d12fa7ebe00a4bedf https://www.encodeproject.org/files/ENCFF559BHR/@@download/ENCFF559BHR.bigWig GRCh38 released ENCFF753GGN bigWig signal p-value ENCSR563YDA ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDGF-human ENCAB691BTB DNA False 2016-06-13 ENCODE 1, 2 ENCFF221CPW, ENCFF227IZS, ENCFF769DDY, ENCFF910IKB 2048279313 ENCODE Processing Pipeline 9ecaa09a8bf351d4b12c65eceb63bd76 https://www.encodeproject.org/files/ENCFF753GGN/@@download/ENCFF753GGN.bigWig GRCh38 released ENCFF899ACG bigWig fold change over control ENCSR563YDA ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDGF-human ENCAB691BTB DNA False 2016-06-13 ENCODE 1 ENCFF769DDY, ENCFF910IKB 1205124223 ENCODE Processing Pipeline d844ac24fef7c4d9f1ba87715a1421aa https://www.encodeproject.org/files/ENCFF899ACG/@@download/ENCFF899ACG.bigWig GRCh38 released ENCFF014QZX bigWig fold change over control ENCSR563YDA ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDGF-human ENCAB691BTB DNA False 2016-06-13 ENCODE 2 ENCFF221CPW, ENCFF227IZS 1259948931 ENCODE Processing Pipeline ae42ea34a9a4c7419cf80291ca56a5fb https://www.encodeproject.org/files/ENCFF014QZX/@@download/ENCFF014QZX.bigWig GRCh38 released ENCFF422WMR bigWig fold change over control ENCSR563YDA ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDGF-human ENCAB691BTB DNA False 2016-06-13 ENCODE 1, 2 ENCFF221CPW, ENCFF227IZS, ENCFF769DDY, ENCFF910IKB 2157765376 ENCODE Processing Pipeline 9fda8e8ddbb6a3076b5d3c2c9fbb6c09 https://www.encodeproject.org/files/ENCFF422WMR/@@download/ENCFF422WMR.bigWig GRCh38 released ENCFF118MIQ bed narrowPeak peaks ENCSR563YDA ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDGF-human ENCAB691BTB DNA False 2016-06-13 ENCODE 1 ENCFF769DDY, ENCFF910IKB 6924357 ENCODE Processing Pipeline 754ee193f4606544cb76668109fb26e8 https://www.encodeproject.org/files/ENCFF118MIQ/@@download/ENCFF118MIQ.bed.gz GRCh38 released ENCFF289CCG bed narrowPeak peaks ENCSR563YDA ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDGF-human ENCAB691BTB DNA False 2016-06-13 ENCODE 2 ENCFF221CPW, ENCFF227IZS 7079306 ENCODE Processing Pipeline 6f7c8dca19181e7bef59866421bcf054 https://www.encodeproject.org/files/ENCFF289CCG/@@download/ENCFF289CCG.bed.gz GRCh38 released ENCFF593YVU bed narrowPeak peaks ENCSR563YDA ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDGF-human ENCAB691BTB DNA False 2016-06-13 ENCODE 1, 2 ENCFF221CPW, ENCFF227IZS, ENCFF769DDY, ENCFF910IKB 7209233 ENCODE Processing Pipeline a63254c14d64305c9c90d1f3126723ee https://www.encodeproject.org/files/ENCFF593YVU/@@download/ENCFF593YVU.bed.gz GRCh38 released ENCFF417WDT bigBed narrowPeak peaks ENCSR563YDA ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDGF-human ENCAB691BTB DNA False 2016-06-13 ENCODE 1 ENCFF118MIQ 12789687 ENCODE Processing Pipeline fa9c246cc6a4b522ad7c63f8fc7b8c5f https://www.encodeproject.org/files/ENCFF417WDT/@@download/ENCFF417WDT.bigBed GRCh38 released ENCFF881EOY bigBed narrowPeak peaks ENCSR563YDA ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDGF-human ENCAB691BTB DNA False 2016-06-13 ENCODE 2 ENCFF289CCG 12671311 ENCODE Processing Pipeline 19e63f4b5bae0f2d8dba582692783166 https://www.encodeproject.org/files/ENCFF881EOY/@@download/ENCFF881EOY.bigBed GRCh38 released ENCFF292RMD bigBed narrowPeak peaks ENCSR563YDA ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDGF-human ENCAB691BTB DNA False 2016-06-13 ENCODE 1, 2 ENCFF593YVU 12479112 ENCODE Processing Pipeline 915db738bd39baf9920f7d6109a0fd8d https://www.encodeproject.org/files/ENCFF292RMD/@@download/ENCFF292RMD.bigBed GRCh38 released ENCFF428RTI bed narrowPeak conservative idr thresholded peaks ENCSR563YDA ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDGF-human ENCAB691BTB DNA False 2016-06-13 ENCODE 1, 2 ENCFF118MIQ, ENCFF289CCG, ENCFF419RSJ, ENCFF593YVU 144033 ENCODE Processing Pipeline ca643415cb59762fab086b5a51da4b48 https://www.encodeproject.org/files/ENCFF428RTI/@@download/ENCFF428RTI.bed.gz GRCh38 released ENCFF497NLG bigBed narrowPeak conservative idr thresholded peaks ENCSR563YDA ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDGF-human ENCAB691BTB DNA False 2016-06-13 ENCODE 1, 2 ENCFF428RTI 336108 ENCODE Processing Pipeline d8f2e4a7313165bf54b12c59b53eaf09 https://www.encodeproject.org/files/ENCFF497NLG/@@download/ENCFF497NLG.bigBed GRCh38 released ENCFF297WMY bed narrowPeak optimal idr thresholded peaks ENCSR563YDA ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDGF-human ENCAB691BTB DNA False 2016-06-13 ENCODE 1, 2 ENCFF118MIQ, ENCFF289CCG, ENCFF419RSJ, ENCFF593YVU 216647 ENCODE Processing Pipeline 3606e415e91b6de4450102636c9a356a https://www.encodeproject.org/files/ENCFF297WMY/@@download/ENCFF297WMY.bed.gz GRCh38 released ENCFF161XWV bigBed narrowPeak optimal idr thresholded peaks ENCSR563YDA ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDGF-human ENCAB691BTB DNA False 2016-06-13 ENCODE 1, 2 ENCFF297WMY 453034 ENCODE Processing Pipeline f075d3ced8da3db5f2c74227c85c8522 https://www.encodeproject.org/files/ENCFF161XWV/@@download/ENCFF161XWV.bigBed GRCh38 released ENCFF954OKQ bigWig signal p-value ENCSR563YDA ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDGF-human ENCAB691BTB DNA False 2016-06-13 ENCODE 1 ENCFF073BGI, ENCFF581ZJL 997512375 ENCODE Processing Pipeline c1bf85012f1f2bd1787d9082b1555dc7 https://www.encodeproject.org/files/ENCFF954OKQ/@@download/ENCFF954OKQ.bigWig hg19 released ENCFF083TQV bigWig fold change over control ENCSR563YDA ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDGF-human ENCAB691BTB DNA False 2016-06-13 ENCODE 1 ENCFF073BGI, ENCFF581ZJL 1158107846 ENCODE Processing Pipeline bfc5dde36a2997e97482f5b7d8498008 https://www.encodeproject.org/files/ENCFF083TQV/@@download/ENCFF083TQV.bigWig hg19 released ENCFF606AWH bigWig fold change over control ENCSR563YDA ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDGF-human ENCAB691BTB DNA False 2016-06-13 ENCODE 1, 2 ENCFF051LWI, ENCFF073BGI, ENCFF204DQZ, ENCFF581ZJL 2156072319 ENCODE Processing Pipeline 03fcd512665ca51be2c2c5cecaedea9b https://www.encodeproject.org/files/ENCFF606AWH/@@download/ENCFF606AWH.bigWig hg19 released ENCFF875MXE bigWig signal p-value ENCSR563YDA ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDGF-human ENCAB691BTB DNA False 2016-06-13 ENCODE 1, 2 ENCFF051LWI, ENCFF073BGI, ENCFF204DQZ, ENCFF581ZJL 2059199551 ENCODE Processing Pipeline 692718155ab981d53242025a18629d24 https://www.encodeproject.org/files/ENCFF875MXE/@@download/ENCFF875MXE.bigWig hg19 released ENCFF676QZG bigBed narrowPeak peaks ENCSR563YDA ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDGF-human ENCAB691BTB DNA False 2016-06-13 ENCODE 2 ENCFF328KFN 12658206 ENCODE Processing Pipeline 0f3f7dcc8ba0540f9ffbc298f309917e https://www.encodeproject.org/files/ENCFF676QZG/@@download/ENCFF676QZG.bigBed hg19 released ENCFF942DKZ bigBed narrowPeak conservative idr thresholded peaks ENCSR563YDA ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDGF-human ENCAB691BTB DNA False 2016-06-13 ENCODE 1, 2 ENCFF926PTQ 331055 ENCODE Processing Pipeline 051222c1235d7e8cf28fe3a5dffca04e https://www.encodeproject.org/files/ENCFF942DKZ/@@download/ENCFF942DKZ.bigBed hg19 released ENCFF415ZVO bed narrowPeak peaks ENCSR563YDA ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDGF-human ENCAB691BTB DNA False 2016-06-13 ENCODE 1, 2 ENCFF051LWI, ENCFF073BGI, ENCFF204DQZ, ENCFF581ZJL 7200902 ENCODE Processing Pipeline 1c2c73dcaf3d5995047ec9d24c4ed272 https://www.encodeproject.org/files/ENCFF415ZVO/@@download/ENCFF415ZVO.bed.gz hg19 released ENCFF701JMF bed narrowPeak peaks ENCSR563YDA ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDGF-human ENCAB691BTB DNA False 2016-06-13 ENCODE 1 ENCFF073BGI, ENCFF581ZJL 6933666 ENCODE Processing Pipeline 1620ca7375f85882e35e913c96ae9ec5 https://www.encodeproject.org/files/ENCFF701JMF/@@download/ENCFF701JMF.bed.gz hg19 released ENCFF926PTQ bed narrowPeak conservative idr thresholded peaks ENCSR563YDA ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDGF-human ENCAB691BTB DNA False 2016-06-13 ENCODE 1, 2 ENCFF001TDO, ENCFF328KFN, ENCFF415ZVO, ENCFF701JMF 142211 ENCODE Processing Pipeline 115d779926062d7aa719aec177231932 https://www.encodeproject.org/files/ENCFF926PTQ/@@download/ENCFF926PTQ.bed.gz hg19 released ENCFF328KFN bed narrowPeak peaks ENCSR563YDA ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDGF-human ENCAB691BTB DNA False 2016-06-13 ENCODE 2 ENCFF051LWI, ENCFF204DQZ 7070560 ENCODE Processing Pipeline d09fa112a2f46a52ff767bac569d3e8d https://www.encodeproject.org/files/ENCFF328KFN/@@download/ENCFF328KFN.bed.gz hg19 released ENCFF032USN bigBed narrowPeak peaks ENCSR563YDA ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDGF-human ENCAB691BTB DNA False 2016-06-13 ENCODE 1, 2 ENCFF415ZVO 12468355 ENCODE Processing Pipeline 166a0a5276ebc26bc37f8fe47853ebac https://www.encodeproject.org/files/ENCFF032USN/@@download/ENCFF032USN.bigBed hg19 released ENCFF849ZUF bed narrowPeak optimal idr thresholded peaks ENCSR563YDA ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDGF-human ENCAB691BTB DNA False 2016-06-13 ENCODE 1, 2 ENCFF001TDO, ENCFF328KFN, ENCFF415ZVO, ENCFF701JMF 214540 ENCODE Processing Pipeline 5889d9be33d5b555b97ac8b885edd835 https://www.encodeproject.org/files/ENCFF849ZUF/@@download/ENCFF849ZUF.bed.gz hg19 released ENCFF197KYC bigBed narrowPeak peaks ENCSR563YDA ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDGF-human ENCAB691BTB DNA False 2016-06-13 ENCODE 1 ENCFF701JMF 12767001 ENCODE Processing Pipeline f23a1b892e4d58b488cf69a34af9d947 https://www.encodeproject.org/files/ENCFF197KYC/@@download/ENCFF197KYC.bigBed hg19 released ENCFF836FFC bigBed narrowPeak optimal idr thresholded peaks ENCSR563YDA ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDGF-human ENCAB691BTB DNA False 2016-06-13 ENCODE 1, 2 ENCFF849ZUF 447540 ENCODE Processing Pipeline 6c0d01b0b29a092cd4b6d25fe55e2d61 https://www.encodeproject.org/files/ENCFF836FFC/@@download/ENCFF836FFC.bigBed hg19 released ENCFF437CXV bam unfiltered alignments ENCSR776CYN ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZFP36-human ENCAB118PND DNA False 2018-01-26 ENCODE 1 36 ENCFF002EWV, ENCFF807MUK 1248878133 ENCODE Processing Pipeline 34d11e0cf19160a44dd2c19e2b55d2a8 https://www.encodeproject.org/files/ENCFF437CXV/@@download/ENCFF437CXV.bam hg19 released low read depth, low read length experiment not submitted to GEO partially characterized antibody ENCFF485TYG bam unfiltered alignments ENCSR776CYN ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZFP36-human ENCAB118PND DNA False 2018-01-26 ENCODE 2 36 ENCFF002EWM, ENCFF807MUK 919254646 ENCODE Processing Pipeline 057b15056f8d806010f45fa3b68b6915 https://www.encodeproject.org/files/ENCFF485TYG/@@download/ENCFF485TYG.bam hg19 released low read depth, low read length experiment not submitted to GEO partially characterized antibody ENCFF002EWM fastq reads ENCSR776CYN ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZFP36-human ENCAB118PND DNA False 2018-01-26 ENCODE 2 1 36 single-ended 764629015 Michael Snyder, Stanford 6ecd735bf470bb23853645d3125aa6ac https://www.encodeproject.org/files/ENCFF002EWM/@@download/ENCFF002EWM.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF002ECS/ released low read depth, low read length experiment not submitted to GEO partially characterized antibody ENCFF002EWV fastq reads ENCSR776CYN ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZFP36-human ENCAB118PND DNA False 2018-01-26 ENCODE 1 1 36 single-ended 1035437334 Michael Snyder, Stanford af28234a344b9eda7db8a20bec9ba4e9 https://www.encodeproject.org/files/ENCFF002EWV/@@download/ENCFF002EWV.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF002ECW/ released low read depth, low read length experiment not submitted to GEO partially characterized antibody ENCFF537VTS bam alignments ENCSR776CYN ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZFP36-human ENCAB118PND DNA False 2018-01-26 ENCODE 2 36 ENCFF002EWM, ENCFF807MUK 641770979 ENCODE Processing Pipeline 9f8bacddad08c5b5f163351fda9cc829 https://www.encodeproject.org/files/ENCFF537VTS/@@download/ENCFF537VTS.bam hg19 released low read depth, low read length experiment not submitted to GEO partially characterized antibody ENCFF698CGK bam alignments ENCSR776CYN ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZFP36-human ENCAB118PND DNA False 2018-01-26 ENCODE 1 36 ENCFF002EWV, ENCFF807MUK 857821994 ENCODE Processing Pipeline 8a247fbf795b14aa997f8923dc5cc368 https://www.encodeproject.org/files/ENCFF698CGK/@@download/ENCFF698CGK.bam hg19 released low read depth, low read length experiment not submitted to GEO partially characterized antibody ENCFF540JYM bigWig fold change over control ENCSR776CYN ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZFP36-human ENCAB118PND DNA False 2018-01-26 ENCODE 2 ENCFF537VTS, ENCFF879OQC 342883843 ENCODE Processing Pipeline 3a950ee1d094a76518b9183ac412e49b https://www.encodeproject.org/files/ENCFF540JYM/@@download/ENCFF540JYM.bigWig hg19 released low read depth, low read length experiment not submitted to GEO partially characterized antibody ENCFF535JGP bigBed narrowPeak peaks ENCSR776CYN ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZFP36-human ENCAB118PND DNA False 2018-01-26 ENCODE 1 ENCFF734ODE 11105791 ENCODE Processing Pipeline a057608d73e373f432596ba8d68e65e9 https://www.encodeproject.org/files/ENCFF535JGP/@@download/ENCFF535JGP.bigBed hg19 released low read depth, low read length experiment not submitted to GEO partially characterized antibody ENCFF548TLZ bigWig signal p-value ENCSR776CYN ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZFP36-human ENCAB118PND DNA False 2018-01-26 ENCODE 2 ENCFF537VTS, ENCFF879OQC 605896716 ENCODE Processing Pipeline f275ed19383bb590f071785fd83d9bd7 https://www.encodeproject.org/files/ENCFF548TLZ/@@download/ENCFF548TLZ.bigWig hg19 released low read depth, low read length experiment not submitted to GEO partially characterized antibody ENCFF688ELV bed narrowPeak peaks ENCSR776CYN ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZFP36-human ENCAB118PND DNA False 2018-01-26 ENCODE 2 ENCFF537VTS, ENCFF879OQC 5214652 ENCODE Processing Pipeline 1e982fdcdd0d5a33ec084f5e05996c50 https://www.encodeproject.org/files/ENCFF688ELV/@@download/ENCFF688ELV.bed.gz hg19 released low read depth, low read length experiment not submitted to GEO partially characterized antibody ENCFF372WDK bigWig signal p-value ENCSR776CYN ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZFP36-human ENCAB118PND DNA False 2018-01-26 ENCODE 1 ENCFF335IPE, ENCFF698CGK 468868412 ENCODE Processing Pipeline fc2b046d5d944b891fe8dc2ed249015c https://www.encodeproject.org/files/ENCFF372WDK/@@download/ENCFF372WDK.bigWig hg19 released low read depth, low read length experiment not submitted to GEO partially characterized antibody ENCFF427BZX bigWig signal p-value ENCSR776CYN ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZFP36-human ENCAB118PND DNA False 2018-01-26 ENCODE 1, 2 ENCFF335IPE, ENCFF537VTS, ENCFF698CGK, ENCFF879OQC 1016129019 ENCODE Processing Pipeline 5ac72e92c2b8fc17a65e4163a785f708 https://www.encodeproject.org/files/ENCFF427BZX/@@download/ENCFF427BZX.bigWig hg19 released low read depth, low read length experiment not submitted to GEO partially characterized antibody ENCFF399DRV bigWig fold change over control ENCSR776CYN ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZFP36-human ENCAB118PND DNA False 2018-01-26 ENCODE 1 ENCFF335IPE, ENCFF698CGK 447679511 ENCODE Processing Pipeline e45de9bfd13be78a66882639df7a68ed https://www.encodeproject.org/files/ENCFF399DRV/@@download/ENCFF399DRV.bigWig hg19 released low read depth, low read length experiment not submitted to GEO partially characterized antibody ENCFF926GDZ bigWig fold change over control ENCSR776CYN ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZFP36-human ENCAB118PND DNA False 2018-01-26 ENCODE 1, 2 ENCFF335IPE, ENCFF537VTS, ENCFF698CGK, ENCFF879OQC 874677728 ENCODE Processing Pipeline 4c790eeff9164e63d7eb4aca762344f4 https://www.encodeproject.org/files/ENCFF926GDZ/@@download/ENCFF926GDZ.bigWig hg19 released low read depth, low read length experiment not submitted to GEO partially characterized antibody ENCFF002SJT bigBed narrowPeak peaks ENCSR776CYN ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZFP36-human ENCAB118PND DNA False 2018-01-26 ENCODE 1, 2 ENCFF233END 13409715 ENCODE Processing Pipeline 6106bd1ae454f49f8bd9d26b302bfa5c https://www.encodeproject.org/files/ENCFF002SJT/@@download/ENCFF002SJT.bigBed hg19 released low read depth, low read length experiment not submitted to GEO partially characterized antibody ENCFF734ODE bed narrowPeak peaks ENCSR776CYN ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZFP36-human ENCAB118PND DNA False 2018-01-26 ENCODE 1 ENCFF335IPE, ENCFF698CGK 5398160 ENCODE Processing Pipeline 0785087fd5337e650d276effc250e9d1 https://www.encodeproject.org/files/ENCFF734ODE/@@download/ENCFF734ODE.bed.gz hg19 released low read depth, low read length experiment not submitted to GEO partially characterized antibody ENCFF233END bed narrowPeak peaks ENCSR776CYN ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZFP36-human ENCAB118PND DNA False 2018-01-26 ENCODE 1, 2 ENCFF335IPE, ENCFF537VTS, ENCFF698CGK, ENCFF879OQC 6583655 ENCODE Processing Pipeline 33004bcb8a0a22e15068fa9b27037dc6 https://www.encodeproject.org/files/ENCFF233END/@@download/ENCFF233END.bed.gz hg19 released low read depth, low read length experiment not submitted to GEO partially characterized antibody ENCFF446WGO bigBed narrowPeak peaks ENCSR776CYN ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZFP36-human ENCAB118PND DNA False 2018-01-26 ENCODE 2 ENCFF688ELV 10792816 ENCODE Processing Pipeline d8847f5cca9f9af3bb9d16abc29efdc3 https://www.encodeproject.org/files/ENCFF446WGO/@@download/ENCFF446WGO.bigBed hg19 released low read depth, low read length experiment not submitted to GEO partially characterized antibody ENCFF091NTA bam unfiltered alignments ENCSR776CYN ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZFP36-human ENCAB118PND DNA False 2018-01-26 ENCODE 2 36 ENCFF002EWM, ENCFF643CGH 922216150 ENCODE Processing Pipeline eed933ac97e4f63ed2d94dca410235e1 https://www.encodeproject.org/files/ENCFF091NTA/@@download/ENCFF091NTA.bam GRCh38 released low read depth, low read length experiment not submitted to GEO partially characterized antibody ENCFF866SCT bam unfiltered alignments ENCSR776CYN ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZFP36-human ENCAB118PND DNA False 2018-01-26 ENCODE 1 36 ENCFF002EWV, ENCFF643CGH 1254461437 ENCODE Processing Pipeline 5d7806d98d76987b2775582c02a12cce https://www.encodeproject.org/files/ENCFF866SCT/@@download/ENCFF866SCT.bam GRCh38 released low read depth, low read length experiment not submitted to GEO partially characterized antibody ENCFF200KSU bam alignments ENCSR776CYN ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZFP36-human ENCAB118PND DNA False 2018-01-26 ENCODE 1 36 ENCFF002EWV, ENCFF643CGH 857295497 ENCODE Processing Pipeline f82d709f6fbd23d0d6cdb5646e89aa7e https://www.encodeproject.org/files/ENCFF200KSU/@@download/ENCFF200KSU.bam GRCh38 released low read depth, low read length experiment not submitted to GEO partially characterized antibody ENCFF444QTA bam alignments ENCSR776CYN ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZFP36-human ENCAB118PND DNA False 2018-01-26 ENCODE 2 36 ENCFF002EWM, ENCFF643CGH 641245931 ENCODE Processing Pipeline 38d93af11dcddf8f2cc5f09b0ab8b87c https://www.encodeproject.org/files/ENCFF444QTA/@@download/ENCFF444QTA.bam GRCh38 released low read depth, low read length experiment not submitted to GEO partially characterized antibody ENCFF183PKB bigWig signal p-value ENCSR776CYN ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZFP36-human ENCAB118PND DNA False 2018-01-26 ENCODE 1 ENCFF156FED, ENCFF200KSU 505580618 ENCODE Processing Pipeline df59ee2835acde07458be8748c8357ba https://www.encodeproject.org/files/ENCFF183PKB/@@download/ENCFF183PKB.bigWig GRCh38 released low read depth, low read length experiment not submitted to GEO partially characterized antibody ENCFF292KEE bigWig signal p-value ENCSR776CYN ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZFP36-human ENCAB118PND DNA False 2018-01-26 ENCODE 2 ENCFF444QTA, ENCFF577FNG 464548599 ENCODE Processing Pipeline 102ab0ba2f3cfc1c5c5caf578a740627 https://www.encodeproject.org/files/ENCFF292KEE/@@download/ENCFF292KEE.bigWig GRCh38 released low read depth, low read length experiment not submitted to GEO partially characterized antibody ENCFF552LGZ bigWig signal p-value ENCSR776CYN ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZFP36-human ENCAB118PND DNA False 2018-01-26 ENCODE 1, 2 ENCFF156FED, ENCFF200KSU, ENCFF444QTA, ENCFF577FNG 936414248 ENCODE Processing Pipeline 5eabd88be3ad6944c585ad9c112f8325 https://www.encodeproject.org/files/ENCFF552LGZ/@@download/ENCFF552LGZ.bigWig GRCh38 released low read depth, low read length experiment not submitted to GEO partially characterized antibody ENCFF638HLC bigWig fold change over control ENCSR776CYN ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZFP36-human ENCAB118PND DNA False 2018-01-26 ENCODE 1 ENCFF156FED, ENCFF200KSU 458793521 ENCODE Processing Pipeline 461fc92b7343210ad849f30a165ed177 https://www.encodeproject.org/files/ENCFF638HLC/@@download/ENCFF638HLC.bigWig GRCh38 released low read depth, low read length experiment not submitted to GEO partially characterized antibody ENCFF903NZK bigWig fold change over control ENCSR776CYN ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZFP36-human ENCAB118PND DNA False 2018-01-26 ENCODE 2 ENCFF444QTA, ENCFF577FNG 334483074 ENCODE Processing Pipeline 5b383cd5da2794eb688f01442a3f4c4c https://www.encodeproject.org/files/ENCFF903NZK/@@download/ENCFF903NZK.bigWig GRCh38 released low read depth, low read length experiment not submitted to GEO partially characterized antibody ENCFF414YUK bigWig fold change over control ENCSR776CYN ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZFP36-human ENCAB118PND DNA False 2018-01-26 ENCODE 1, 2 ENCFF156FED, ENCFF200KSU, ENCFF444QTA, ENCFF577FNG 880020764 ENCODE Processing Pipeline 201dbe798d6943742cd8db02edaae53c https://www.encodeproject.org/files/ENCFF414YUK/@@download/ENCFF414YUK.bigWig GRCh38 released low read depth, low read length experiment not submitted to GEO partially characterized antibody ENCFF286ISA bed narrowPeak peaks ENCSR776CYN ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZFP36-human ENCAB118PND DNA False 2018-01-26 ENCODE 1 ENCFF156FED, ENCFF200KSU 5200918 ENCODE Processing Pipeline 304a20339a8fc3b0eca5e7cc7774b4f6 https://www.encodeproject.org/files/ENCFF286ISA/@@download/ENCFF286ISA.bed.gz GRCh38 released low read depth, low read length experiment not submitted to GEO partially characterized antibody ENCFF706TCL bed narrowPeak peaks ENCSR776CYN ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZFP36-human ENCAB118PND DNA False 2018-01-26 ENCODE 2 ENCFF444QTA, ENCFF577FNG 5120503 ENCODE Processing Pipeline 7c6b16a3a4bf7577ac8a4944199be313 https://www.encodeproject.org/files/ENCFF706TCL/@@download/ENCFF706TCL.bed.gz GRCh38 released low read depth, low read length experiment not submitted to GEO partially characterized antibody ENCFF244DDU bed narrowPeak peaks ENCSR776CYN ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZFP36-human ENCAB118PND DNA False 2018-01-26 ENCODE 1, 2 ENCFF156FED, ENCFF200KSU, ENCFF444QTA, ENCFF577FNG 6414849 ENCODE Processing Pipeline c774c50819a787a3b57b8d35245a702c https://www.encodeproject.org/files/ENCFF244DDU/@@download/ENCFF244DDU.bed.gz GRCh38 released low read depth, low read length experiment not submitted to GEO partially characterized antibody ENCFF336XUD bigBed narrowPeak peaks ENCSR776CYN ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZFP36-human ENCAB118PND DNA False 2018-01-26 ENCODE 1 ENCFF286ISA 11018863 ENCODE Processing Pipeline 8b9c89a14e8ab1ad3606f21f86181f73 https://www.encodeproject.org/files/ENCFF336XUD/@@download/ENCFF336XUD.bigBed GRCh38 released low read depth, low read length experiment not submitted to GEO partially characterized antibody ENCFF828NGB bigBed narrowPeak peaks ENCSR776CYN ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZFP36-human ENCAB118PND DNA False 2018-01-26 ENCODE 2 ENCFF706TCL 10793504 ENCODE Processing Pipeline b9386dcd09e1343d6f1e52fc48e44357 https://www.encodeproject.org/files/ENCFF828NGB/@@download/ENCFF828NGB.bigBed GRCh38 released low read depth, low read length experiment not submitted to GEO partially characterized antibody ENCFF493ULM bigBed narrowPeak peaks ENCSR776CYN ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZFP36-human ENCAB118PND DNA False 2018-01-26 ENCODE 1, 2 ENCFF244DDU 13366049 ENCODE Processing Pipeline 2967cae8501f4e92c269555fcb022930 https://www.encodeproject.org/files/ENCFF493ULM/@@download/ENCFF493ULM.bigBed GRCh38 released low read depth, low read length experiment not submitted to GEO partially characterized antibody ENCFF301SLW bed narrowPeak conservative idr thresholded peaks ENCSR776CYN ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZFP36-human ENCAB118PND DNA False 2018-01-26 ENCODE 1, 2 ENCFF244DDU, ENCFF286ISA, ENCFF419RSJ, ENCFF706TCL 337570 ENCODE Processing Pipeline 32a0abce09e3a4f9d3dc82846ebf9b3d https://www.encodeproject.org/files/ENCFF301SLW/@@download/ENCFF301SLW.bed.gz GRCh38 released low read depth, low read length experiment not submitted to GEO partially characterized antibody ENCFF825ODI bigBed narrowPeak conservative idr thresholded peaks ENCSR776CYN ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZFP36-human ENCAB118PND DNA False 2018-01-26 ENCODE 1, 2 ENCFF301SLW 632456 ENCODE Processing Pipeline a3294fa740d174318bb07c0d3849849d https://www.encodeproject.org/files/ENCFF825ODI/@@download/ENCFF825ODI.bigBed GRCh38 released low read depth, low read length experiment not submitted to GEO partially characterized antibody ENCFF763HPQ bed narrowPeak optimal idr thresholded peaks ENCSR776CYN ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZFP36-human ENCAB118PND DNA False 2018-01-26 ENCODE 1, 2 ENCFF244DDU, ENCFF286ISA, ENCFF419RSJ, ENCFF706TCL 382406 ENCODE Processing Pipeline 2c0b59eb801d4029352779b1d40a193e https://www.encodeproject.org/files/ENCFF763HPQ/@@download/ENCFF763HPQ.bed.gz GRCh38 released low read depth, low read length experiment not submitted to GEO partially characterized antibody ENCFF067FEI bigBed narrowPeak optimal idr thresholded peaks ENCSR776CYN ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZFP36-human ENCAB118PND DNA False 2018-01-26 ENCODE 1, 2 ENCFF763HPQ 694780 ENCODE Processing Pipeline 25f0743e05bda977407c4cf58cd594bf https://www.encodeproject.org/files/ENCFF067FEI/@@download/ENCFF067FEI.bigBed GRCh38 released low read depth, low read length experiment not submitted to GEO partially characterized antibody ENCFF521CRG bed narrowPeak optimal idr thresholded peaks ENCSR776CYN ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZFP36-human ENCAB118PND DNA False 2018-01-26 ENCODE 1, 2 ENCFF001TDO, ENCFF233END, ENCFF688ELV, ENCFF734ODE 361453 ENCODE Processing Pipeline 8905c7dc4614bdddbe70d643dae0973b https://www.encodeproject.org/files/ENCFF521CRG/@@download/ENCFF521CRG.bed.gz hg19 released low read depth, low read length experiment not submitted to GEO partially characterized antibody ENCFF622ZJW bigBed narrowPeak optimal idr thresholded peaks ENCSR776CYN ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZFP36-human ENCAB118PND DNA False 2018-01-26 ENCODE 1, 2 ENCFF521CRG 662978 ENCODE Processing Pipeline 1b6cec940e54c9e7f2c99b28473064b2 https://www.encodeproject.org/files/ENCFF622ZJW/@@download/ENCFF622ZJW.bigBed hg19 released low read depth, low read length experiment not submitted to GEO partially characterized antibody ENCFF262ZUB bed narrowPeak conservative idr thresholded peaks ENCSR776CYN ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZFP36-human ENCAB118PND DNA False 2018-01-26 ENCODE 1, 2 ENCFF001TDO, ENCFF233END, ENCFF688ELV, ENCFF734ODE 319016 ENCODE Processing Pipeline fa7c97e75eda3649cacea317695be06e https://www.encodeproject.org/files/ENCFF262ZUB/@@download/ENCFF262ZUB.bed.gz hg19 released low read depth, low read length experiment not submitted to GEO partially characterized antibody ENCFF142MPO bigBed narrowPeak conservative idr thresholded peaks ENCSR776CYN ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZFP36-human ENCAB118PND DNA False 2018-01-26 ENCODE 1, 2 ENCFF262ZUB 605924 ENCODE Processing Pipeline 61c0eee0abbe873663958d2c63766cd3 https://www.encodeproject.org/files/ENCFF142MPO/@@download/ENCFF142MPO.bigBed hg19 released low read depth, low read length experiment not submitted to GEO partially characterized antibody ENCFF485IHI fastq reads ENCSR047LSJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAF15-human ENCAB228JAJ DNA SDS formaldehyde False 2017-02-27 ENCODE 1 1 40 single-ended 588794480 Xiang-Dong Fu, UCSD 68ea857e0bb36973f6bf1fea403195ed SRA:SRR6212593 https://www.encodeproject.org/files/ENCFF485IHI/@@download/ENCFF485IHI.fastq.gz Illumina HiSeq 2500 /files/ENCFF089EYX/ released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF676SIM fastq reads ENCSR047LSJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAF15-human ENCAB228JAJ DNA SDS formaldehyde False 2017-02-27 ENCODE 2 1 40 single-ended 735942386 Xiang-Dong Fu, UCSD 3abe9f92aadfdc5959dbd4614844dc0b SRA:SRR6212594 https://www.encodeproject.org/files/ENCFF676SIM/@@download/ENCFF676SIM.fastq.gz Illumina HiSeq 2500 /files/ENCFF419XJY/ released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF178QOE bam unfiltered alignments ENCSR047LSJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAF15-human ENCAB228JAJ DNA SDS formaldehyde False 2017-02-27 ENCODE 1 40 ENCFF485IHI, ENCFF807MUK 796133545 ENCODE Processing Pipeline bfa0ea4f74a837ffd70c7daebbe257ac https://www.encodeproject.org/files/ENCFF178QOE/@@download/ENCFF178QOE.bam hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF974IYP bam unfiltered alignments ENCSR047LSJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAF15-human ENCAB228JAJ DNA SDS formaldehyde False 2017-02-27 ENCODE 1 40 ENCFF485IHI, ENCFF643CGH 798518590 ENCODE Processing Pipeline 6df93c80f3645d67d93dbed98e651c2c https://www.encodeproject.org/files/ENCFF974IYP/@@download/ENCFF974IYP.bam GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF641OBF bam alignments ENCSR047LSJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAF15-human ENCAB228JAJ DNA SDS formaldehyde False 2017-02-27 ENCODE 1 40 ENCFF485IHI, ENCFF643CGH 469676118 ENCODE Processing Pipeline a9205be45f820d034ddeecfa506dd283 https://www.encodeproject.org/files/ENCFF641OBF/@@download/ENCFF641OBF.bam GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF818HIH bam alignments ENCSR047LSJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAF15-human ENCAB228JAJ DNA SDS formaldehyde False 2017-02-27 ENCODE 1 40 ENCFF485IHI, ENCFF807MUK 470289195 ENCODE Processing Pipeline edd428e000e1c7100391a00ecad0a122 https://www.encodeproject.org/files/ENCFF818HIH/@@download/ENCFF818HIH.bam hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF224GTG bam alignments ENCSR047LSJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAF15-human ENCAB228JAJ DNA SDS formaldehyde False 2017-02-27 ENCODE 2 40 ENCFF676SIM, ENCFF807MUK 510969265 ENCODE Processing Pipeline 70d1a1fd863afd96c4d038469ab35e96 https://www.encodeproject.org/files/ENCFF224GTG/@@download/ENCFF224GTG.bam hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF076NZJ bam unfiltered alignments ENCSR047LSJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAF15-human ENCAB228JAJ DNA SDS formaldehyde False 2017-02-27 ENCODE 2 40 ENCFF676SIM, ENCFF807MUK 966727626 ENCODE Processing Pipeline 5f5b423599568082f2d7f042a8587a99 https://www.encodeproject.org/files/ENCFF076NZJ/@@download/ENCFF076NZJ.bam hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF408AOV bam unfiltered alignments ENCSR047LSJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAF15-human ENCAB228JAJ DNA SDS formaldehyde False 2017-02-27 ENCODE 2 40 ENCFF643CGH, ENCFF676SIM 970206041 ENCODE Processing Pipeline 1eb942b16e5236cdf64223e9845e7513 https://www.encodeproject.org/files/ENCFF408AOV/@@download/ENCFF408AOV.bam GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF408GAN bam alignments ENCSR047LSJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAF15-human ENCAB228JAJ DNA SDS formaldehyde False 2017-02-27 ENCODE 2 40 ENCFF643CGH, ENCFF676SIM 510389308 ENCODE Processing Pipeline 9c2327e622a30c6c244e305107892f0c https://www.encodeproject.org/files/ENCFF408GAN/@@download/ENCFF408GAN.bam GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF783FTH bigWig signal p-value ENCSR047LSJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAF15-human ENCAB228JAJ DNA SDS formaldehyde False 2017-02-27 ENCODE 1 ENCFF456BYT, ENCFF818HIH 454731330 ENCODE Processing Pipeline a011da42d62b07961a5103a338f1a622 https://www.encodeproject.org/files/ENCFF783FTH/@@download/ENCFF783FTH.bigWig hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF409XKG bigWig signal p-value ENCSR047LSJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAF15-human ENCAB228JAJ DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF224GTG, ENCFF321CYT, ENCFF456BYT, ENCFF818HIH 1053371521 ENCODE Processing Pipeline 785980c10ea2ca4fd4eed6adb1dd0164 https://www.encodeproject.org/files/ENCFF409XKG/@@download/ENCFF409XKG.bigWig hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF485PMQ bigWig fold change over control ENCSR047LSJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAF15-human ENCAB228JAJ DNA SDS formaldehyde False 2017-02-27 ENCODE 1 ENCFF456BYT, ENCFF818HIH 335554921 ENCODE Processing Pipeline 24534cfcf130fdce8328d9e2d3ca7bce https://www.encodeproject.org/files/ENCFF485PMQ/@@download/ENCFF485PMQ.bigWig hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF629KZP bigWig signal p-value ENCSR047LSJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAF15-human ENCAB228JAJ DNA SDS formaldehyde False 2017-02-27 ENCODE 2 ENCFF224GTG, ENCFF321CYT 504390777 ENCODE Processing Pipeline 9583e1b19c8c44b561e909cb97de0842 https://www.encodeproject.org/files/ENCFF629KZP/@@download/ENCFF629KZP.bigWig hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF183YMK bigWig fold change over control ENCSR047LSJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAF15-human ENCAB228JAJ DNA SDS formaldehyde False 2017-02-27 ENCODE 2 ENCFF224GTG, ENCFF321CYT 375580110 ENCODE Processing Pipeline f403e746308146d564ae7dee02f0efa2 https://www.encodeproject.org/files/ENCFF183YMK/@@download/ENCFF183YMK.bigWig hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF405IFO bigWig fold change over control ENCSR047LSJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAF15-human ENCAB228JAJ DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF224GTG, ENCFF321CYT, ENCFF456BYT, ENCFF818HIH 839115829 ENCODE Processing Pipeline 79de97ec6af6457b00621cf5c715e206 https://www.encodeproject.org/files/ENCFF405IFO/@@download/ENCFF405IFO.bigWig hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF789HHG bed narrowPeak peaks ENCSR047LSJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAF15-human ENCAB228JAJ DNA SDS formaldehyde False 2017-02-27 ENCODE 2 ENCFF224GTG, ENCFF321CYT 4774722 ENCODE Processing Pipeline 2b980e8a647d156579335201a39ef984 https://www.encodeproject.org/files/ENCFF789HHG/@@download/ENCFF789HHG.bed.gz hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF176TKM bigBed narrowPeak peaks ENCSR047LSJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAF15-human ENCAB228JAJ DNA SDS formaldehyde False 2017-02-27 ENCODE 1 ENCFF690XXK 13061280 ENCODE Processing Pipeline f907f3e8e9b2b1eec9e8af593c954416 https://www.encodeproject.org/files/ENCFF176TKM/@@download/ENCFF176TKM.bigBed hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF690XXK bed narrowPeak peaks ENCSR047LSJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAF15-human ENCAB228JAJ DNA SDS formaldehyde False 2017-02-27 ENCODE 1 ENCFF456BYT, ENCFF818HIH 5047502 ENCODE Processing Pipeline fa771e766c74b2ac2c02538825850bed https://www.encodeproject.org/files/ENCFF690XXK/@@download/ENCFF690XXK.bed.gz hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF151HYU bed narrowPeak peaks ENCSR047LSJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAF15-human ENCAB228JAJ DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF224GTG, ENCFF321CYT, ENCFF456BYT, ENCFF818HIH 6362327 ENCODE Processing Pipeline c316effd94b7f25ca9f99bbb89663fa4 https://www.encodeproject.org/files/ENCFF151HYU/@@download/ENCFF151HYU.bed.gz hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF095GRH bigBed narrowPeak peaks ENCSR047LSJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAF15-human ENCAB228JAJ DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF151HYU 13414296 ENCODE Processing Pipeline e59dc2d3dc84f02c75f9034b38985c6b https://www.encodeproject.org/files/ENCFF095GRH/@@download/ENCFF095GRH.bigBed hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF392KOM bigBed narrowPeak optimal idr thresholded peaks ENCSR047LSJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAF15-human ENCAB228JAJ DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF617CAZ 107171 ENCODE Processing Pipeline 0a8d3b20b31500d366ea6fce49c49816 https://www.encodeproject.org/files/ENCFF392KOM/@@download/ENCFF392KOM.bigBed hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF477ZCJ bigBed narrowPeak peaks ENCSR047LSJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAF15-human ENCAB228JAJ DNA SDS formaldehyde False 2017-02-27 ENCODE 2 ENCFF789HHG 10966192 ENCODE Processing Pipeline 7436eebe62b456d71df42069e5647af5 https://www.encodeproject.org/files/ENCFF477ZCJ/@@download/ENCFF477ZCJ.bigBed hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF713VPX bigBed narrowPeak conservative idr thresholded peaks ENCSR047LSJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAF15-human ENCAB228JAJ DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF975SNX 95254 ENCODE Processing Pipeline 244bb238b6790a88b0beb769e011f71e https://www.encodeproject.org/files/ENCFF713VPX/@@download/ENCFF713VPX.bigBed hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF617CAZ bed narrowPeak optimal idr thresholded peaks ENCSR047LSJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAF15-human ENCAB228JAJ DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF001TDO, ENCFF151HYU, ENCFF690XXK, ENCFF789HHG 14792 ENCODE Processing Pipeline 454b3aaf30cc5d814dc031bb5e8ca333 https://www.encodeproject.org/files/ENCFF617CAZ/@@download/ENCFF617CAZ.bed.gz hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF975SNX bed narrowPeak conservative idr thresholded peaks ENCSR047LSJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAF15-human ENCAB228JAJ DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF001TDO, ENCFF151HYU, ENCFF690XXK, ENCFF789HHG 10928 ENCODE Processing Pipeline 3e6254c2f3895cc2ed733012a597f5f6 https://www.encodeproject.org/files/ENCFF975SNX/@@download/ENCFF975SNX.bed.gz hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF927TRB bigWig signal p-value ENCSR047LSJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAF15-human ENCAB228JAJ DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF408GAN, ENCFF641OBF, ENCFF661ZRO, ENCFF872FDX 852510562 ENCODE Processing Pipeline 1adbfddc9d363ebd58049135bb887256 https://www.encodeproject.org/files/ENCFF927TRB/@@download/ENCFF927TRB.bigWig GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF017LTH bigWig signal p-value ENCSR047LSJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAF15-human ENCAB228JAJ DNA SDS formaldehyde False 2017-02-27 ENCODE 1 ENCFF641OBF, ENCFF661ZRO 468033123 ENCODE Processing Pipeline e2b9c0bba7ae9586469689946ec14a44 https://www.encodeproject.org/files/ENCFF017LTH/@@download/ENCFF017LTH.bigWig GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF331JDA bigWig signal p-value ENCSR047LSJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAF15-human ENCAB228JAJ DNA SDS formaldehyde False 2017-02-27 ENCODE 2 ENCFF408GAN, ENCFF872FDX 513414050 ENCODE Processing Pipeline e1154725f3f2d00034d605f6e502e5cc https://www.encodeproject.org/files/ENCFF331JDA/@@download/ENCFF331JDA.bigWig GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF998ZUC bigWig fold change over control ENCSR047LSJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAF15-human ENCAB228JAJ DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF408GAN, ENCFF641OBF, ENCFF661ZRO, ENCFF872FDX 808617521 ENCODE Processing Pipeline b9cfa6bf29d59e3b1f5fe39e446a8048 https://www.encodeproject.org/files/ENCFF998ZUC/@@download/ENCFF998ZUC.bigWig GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF603GHG bed narrowPeak peaks ENCSR047LSJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAF15-human ENCAB228JAJ DNA SDS formaldehyde False 2017-02-27 ENCODE 1 ENCFF641OBF, ENCFF661ZRO 4971802 ENCODE Processing Pipeline d37cf813e2e91871901aa7e7d88da0e6 https://www.encodeproject.org/files/ENCFF603GHG/@@download/ENCFF603GHG.bed.gz GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF346NMC bed narrowPeak conservative idr thresholded peaks ENCSR047LSJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAF15-human ENCAB228JAJ DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF010DBI, ENCFF419RSJ, ENCFF603GHG, ENCFF979TPQ 9205 ENCODE Processing Pipeline 98ce6d730ab5245aa16eba89d8f019a2 https://www.encodeproject.org/files/ENCFF346NMC/@@download/ENCFF346NMC.bed.gz GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF890FHB bigWig fold change over control ENCSR047LSJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAF15-human ENCAB228JAJ DNA SDS formaldehyde False 2017-02-27 ENCODE 1 ENCFF641OBF, ENCFF661ZRO 335173078 ENCODE Processing Pipeline 88a79c33161633576fb4b5b5acdc1bfd https://www.encodeproject.org/files/ENCFF890FHB/@@download/ENCFF890FHB.bigWig GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF010DBI bed narrowPeak peaks ENCSR047LSJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAF15-human ENCAB228JAJ DNA SDS formaldehyde False 2017-02-27 ENCODE 2 ENCFF408GAN, ENCFF872FDX 4768702 ENCODE Processing Pipeline ad202b7b7bb662274f63c91c08feabad https://www.encodeproject.org/files/ENCFF010DBI/@@download/ENCFF010DBI.bed.gz GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF979TPQ bed narrowPeak peaks ENCSR047LSJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAF15-human ENCAB228JAJ DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF408GAN, ENCFF641OBF, ENCFF661ZRO, ENCFF872FDX 6235743 ENCODE Processing Pipeline c01d1a59261478c3f7b54959e1a1e8cb https://www.encodeproject.org/files/ENCFF979TPQ/@@download/ENCFF979TPQ.bed.gz GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF133HAS bigBed narrowPeak conservative idr thresholded peaks ENCSR047LSJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAF15-human ENCAB228JAJ DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF346NMC 92893 ENCODE Processing Pipeline 8bdee13dde06d8750b8281b4af2cf397 https://www.encodeproject.org/files/ENCFF133HAS/@@download/ENCFF133HAS.bigBed GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF710LLF bed narrowPeak optimal idr thresholded peaks ENCSR047LSJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAF15-human ENCAB228JAJ DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF010DBI, ENCFF419RSJ, ENCFF603GHG, ENCFF979TPQ 13465 ENCODE Processing Pipeline 8feb6509c8f0d41bf06713a6127b027c https://www.encodeproject.org/files/ENCFF710LLF/@@download/ENCFF710LLF.bed.gz GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF985GIN bigWig fold change over control ENCSR047LSJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAF15-human ENCAB228JAJ DNA SDS formaldehyde False 2017-02-27 ENCODE 2 ENCFF408GAN, ENCFF872FDX 382670465 ENCODE Processing Pipeline 18210ad2024b00ac32146d7c83344023 https://www.encodeproject.org/files/ENCFF985GIN/@@download/ENCFF985GIN.bigWig GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF189KCM bigBed narrowPeak peaks ENCSR047LSJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAF15-human ENCAB228JAJ DNA SDS formaldehyde False 2017-02-27 ENCODE 1 ENCFF603GHG 10914877 ENCODE Processing Pipeline a4f5aff4e28ed5d5a34f5b31b69b28f6 https://www.encodeproject.org/files/ENCFF189KCM/@@download/ENCFF189KCM.bigBed GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF030GJB bigBed narrowPeak peaks ENCSR047LSJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAF15-human ENCAB228JAJ DNA SDS formaldehyde False 2017-02-27 ENCODE 2 ENCFF010DBI 10974265 ENCODE Processing Pipeline 0f8ac192787ca5ee9d2ae6fa7b626064 https://www.encodeproject.org/files/ENCFF030GJB/@@download/ENCFF030GJB.bigBed GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF402PFE bigBed narrowPeak peaks ENCSR047LSJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAF15-human ENCAB228JAJ DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF979TPQ 13450826 ENCODE Processing Pipeline 41b2e0ed800bc53b230eaf5169da590a https://www.encodeproject.org/files/ENCFF402PFE/@@download/ENCFF402PFE.bigBed GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF932TEL bigBed narrowPeak optimal idr thresholded peaks ENCSR047LSJ ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAF15-human ENCAB228JAJ DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF710LLF 106099 ENCODE Processing Pipeline 35f7b5c473f6fc0e2843871d6bde1b68 https://www.encodeproject.org/files/ENCFF932TEL/@@download/ENCFF932TEL.bigBed GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity ENCFF000YMD bam alignments ENCSR000EWL ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F4-human ENCAB000AFV DNA see document see document False 2011-10-29 ENCODE 1 ENCFF000YMI 269624221 Peggy Farnham, USC 6ecb62750761d18c74504f21be1baf6b https://www.encodeproject.org/files/ENCFF000YMD/@@download/ENCFF000YMD.bam hg19 archived borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth, missing control alignments ENCFF000YME bigBed narrowPeak peaks ENCSR000EWL ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F4-human ENCAB000AFV DNA see document see document False 2011-10-29 ENCODE ENCFF001VMY 358058 Peggy Farnham, USC d83b787561c5c8920246ff576511cab2 https://www.encodeproject.org/files/ENCFF000YME/@@download/ENCFF000YME.bigBed hg19 archived borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth, missing control alignments ENCFF000YMF bigWig signal ENCSR000EWL ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F4-human ENCAB000AFV DNA see document see document False 2011-10-29 ENCODE 287729040 Peggy Farnham, USC 4f5e2d5aae04f91d603cda5910685b88 https://www.encodeproject.org/files/ENCFF000YMF/@@download/ENCFF000YMF.bigWig hg19 archived borderline replicate concordance biological replicates with identical biosample, missing derived_from insufficient read length, insufficient read depth extremely low read depth, missing control alignments ENCFF000YMG bam alignments ENCSR000EWL ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F4-human ENCAB000AFV DNA see document see document False 2011-10-29 ENCODE 2 ENCFF000YMW 543700781 Peggy Farnham, USC 90ed7b53be9f0b7d6e9450c4de2511a8 https://www.encodeproject.org/files/ENCFF000YMG/@@download/ENCFF000YMG.bam hg19 archived borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth, missing control alignments ENCFF000YMI fastq reads ENCSR000EWL ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F4-human ENCAB000AFV DNA see document see document False 2011-10-29 ENCODE 1 1 27 single-ended 208953328 Peggy Farnham, USC a121fe69be4fa43ec714b690ac704bef https://www.encodeproject.org/files/ENCFF000YMI/@@download/ENCFF000YMI.fastq.gz Illumina Genome Analyzer /files/ENCFF000VEK/ released borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth, missing control alignments ENCFF000YMW fastq reads ENCSR000EWL ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F4-human ENCAB000AFV DNA see document see document False 2011-10-29 ENCODE 2 1 27 single-ended 444371509 Peggy Farnham, USC c50266f3b652eabbc21c141257b7b4d5 https://www.encodeproject.org/files/ENCFF000YMW/@@download/ENCFF000YMW.fastq.gz Illumina Genome Analyzer /files/ENCFF000VEK/ released borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth, missing control alignments ENCFF001VMY bed narrowPeak peaks ENCSR000EWL ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F4-human ENCAB000AFV DNA see document see document False 2011-10-29 ENCODE 139981 Peggy Farnham, USC 45f5d92b80be9bf03731e22373b94415 https://www.encodeproject.org/files/ENCFF001VMY/@@download/ENCFF001VMY.bed.gz hg19 archived borderline replicate concordance biological replicates with identical biosample, missing derived_from insufficient read length, insufficient read depth extremely low read depth, missing control alignments ENCFF002CWM bed narrowPeak optimal idr thresholded peaks ENCSR000EWL ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F4-human ENCAB000AFV DNA see document see document False 2011-10-29 ENCODE 160130 ENCODE Consortium Analysis Working Group da49675ab05c9063e70e6dd11b5e566b https://www.encodeproject.org/files/ENCFF002CWM/@@download/ENCFF002CWM.bed.gz hg19 archived borderline replicate concordance biological replicates with identical biosample, missing derived_from insufficient read length, insufficient read depth extremely low read depth, missing control alignments ENCFF581DMX bigBed narrowPeak optimal idr thresholded peaks ENCSR000EWL ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F4-human ENCAB000AFV DNA see document see document False 2011-10-29 ENCODE ENCFF002CWM 350313 ENCODE Consortium ec0e93461034023e7fb00833a60f5e88 https://www.encodeproject.org/files/ENCFF581DMX/@@download/ENCFF581DMX.bigBed hg19 archived borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth, missing control alignments ENCFF843AGP bam unfiltered alignments ENCSR000EWL ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F4-human ENCAB000AFV DNA see document see document False 2011-10-29 ENCODE 1 27 ENCFF000YMI, ENCFF643CGH 254729381 ENCODE Processing Pipeline 1e652e64ef81a96b2531e045d792914e https://www.encodeproject.org/files/ENCFF843AGP/@@download/ENCFF843AGP.bam GRCh38 released borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth, missing control alignments ENCFF718DAY bam unfiltered alignments ENCSR000EWL ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F4-human ENCAB000AFV DNA see document see document False 2011-10-29 ENCODE 2 27 ENCFF000YMW, ENCFF643CGH 542455848 ENCODE Processing Pipeline fd9dbcd7478e3b5aa06adb3e4f9aa5b0 https://www.encodeproject.org/files/ENCFF718DAY/@@download/ENCFF718DAY.bam GRCh38 released borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth, missing control alignments ENCFF613CDR bam alignments ENCSR000EWL ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F4-human ENCAB000AFV DNA see document see document False 2011-10-29 ENCODE 1 27 ENCFF000YMI, ENCFF643CGH 115937822 ENCODE Processing Pipeline bcaf749e87cec74df8b4c8d22e5b63a3 https://www.encodeproject.org/files/ENCFF613CDR/@@download/ENCFF613CDR.bam GRCh38 released borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth, missing control alignments ENCFF156NIH bam alignments ENCSR000EWL ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F4-human ENCAB000AFV DNA see document see document False 2011-10-29 ENCODE 2 27 ENCFF000YMW, ENCFF643CGH 242277887 ENCODE Processing Pipeline a03b5970926ca95548c43e2ca3679d9b https://www.encodeproject.org/files/ENCFF156NIH/@@download/ENCFF156NIH.bam GRCh38 released borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth, missing control alignments ENCFF674YIM bam unfiltered alignments ENCSR000EWL ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F4-human ENCAB000AFV DNA see document see document False 2011-10-29 ENCODE 2 27 ENCFF000YMW, ENCFF807MUK 541485623 ENCODE Processing Pipeline dd9d32384ba6fd8077b4e15fc645b605 https://www.encodeproject.org/files/ENCFF674YIM/@@download/ENCFF674YIM.bam hg19 released borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth, missing control alignments ENCFF246JDQ bam alignments ENCSR000EWL ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F4-human ENCAB000AFV DNA see document see document False 2011-10-29 ENCODE 1 27 ENCFF000YMI, ENCFF807MUK 116174376 ENCODE Processing Pipeline a59b0185b4a6514bec7da80c9b9f0797 https://www.encodeproject.org/files/ENCFF246JDQ/@@download/ENCFF246JDQ.bam hg19 released borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth, missing control alignments ENCFF125MPD bam alignments ENCSR000EWL ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F4-human ENCAB000AFV DNA see document see document False 2011-10-29 ENCODE 2 27 ENCFF000YMW, ENCFF807MUK 242614109 ENCODE Processing Pipeline f786bdc883561ac2d304ed746635aeee https://www.encodeproject.org/files/ENCFF125MPD/@@download/ENCFF125MPD.bam hg19 released borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth, missing control alignments ENCFF251JRO bam unfiltered alignments ENCSR000EWL ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F4-human ENCAB000AFV DNA see document see document False 2011-10-29 ENCODE 1 27 ENCFF000YMI, ENCFF807MUK 254191005 ENCODE Processing Pipeline bc7194d0818446ffde634bd63b971481 https://www.encodeproject.org/files/ENCFF251JRO/@@download/ENCFF251JRO.bam hg19 released borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth, missing control alignments ENCFF682GFK bigWig fold change over control ENCSR000EWL ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F4-human ENCAB000AFV DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF156NIH, ENCFF613CDR 219640598 ENCODE Processing Pipeline 7453f6025705f5a967813d3db44c22c1 https://www.encodeproject.org/files/ENCFF682GFK/@@download/ENCFF682GFK.bigWig GRCh38 released borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth, missing control alignments ENCFF966QRE bed narrowPeak peaks ENCSR000EWL ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F4-human ENCAB000AFV DNA see document see document False 2011-10-29 ENCODE 2 ENCFF156NIH 3606470 ENCODE Processing Pipeline b1306dc28cd74767f249794c34949816 https://www.encodeproject.org/files/ENCFF966QRE/@@download/ENCFF966QRE.bed.gz GRCh38 released borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth, missing control alignments ENCFF120UBU bigBed narrowPeak peaks ENCSR000EWL ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F4-human ENCAB000AFV DNA see document see document False 2011-10-29 ENCODE 1 ENCFF743VSN 2727005 ENCODE Processing Pipeline d9f67da1d44a385e6d2a629afc354128 https://www.encodeproject.org/files/ENCFF120UBU/@@download/ENCFF120UBU.bigBed GRCh38 released borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth, missing control alignments ENCFF662QSV bigBed narrowPeak peaks ENCSR000EWL ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F4-human ENCAB000AFV DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF121WVU 10574607 ENCODE Processing Pipeline 97a5b30a02a978591454dc7f46d5d456 https://www.encodeproject.org/files/ENCFF662QSV/@@download/ENCFF662QSV.bigBed GRCh38 released borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth, missing control alignments ENCFF044VSS bigWig fold change over control ENCSR000EWL ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F4-human ENCAB000AFV DNA see document see document False 2011-10-29 ENCODE 1 ENCFF613CDR 89644449 ENCODE Processing Pipeline 01e9828ec951d677f578d5e13a4f5a00 https://www.encodeproject.org/files/ENCFF044VSS/@@download/ENCFF044VSS.bigWig GRCh38 released borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth, missing control alignments ENCFF625VIR bigBed narrowPeak peaks ENCSR000EWL ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F4-human ENCAB000AFV DNA see document see document False 2011-10-29 ENCODE 2 ENCFF966QRE 8146313 ENCODE Processing Pipeline 1e97fcc3f3ac20eaddd2c573ae753dab https://www.encodeproject.org/files/ENCFF625VIR/@@download/ENCFF625VIR.bigBed GRCh38 released borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth, missing control alignments ENCFF225TLP bed narrowPeak optimal idr thresholded peaks ENCSR000EWL ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F4-human ENCAB000AFV DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF121WVU, ENCFF419RSJ, ENCFF743VSN, ENCFF966QRE 172432 ENCODE Processing Pipeline bdda78cf9f5c0857af42c0c6077cd1c1 https://www.encodeproject.org/files/ENCFF225TLP/@@download/ENCFF225TLP.bed.gz GRCh38 released borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth, missing control alignments ENCFF101XGB bigWig signal p-value ENCSR000EWL ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F4-human ENCAB000AFV DNA see document see document False 2011-10-29 ENCODE 1 ENCFF613CDR 361705181 ENCODE Processing Pipeline 0217636c204352bb42ca0491bd26e3fe https://www.encodeproject.org/files/ENCFF101XGB/@@download/ENCFF101XGB.bigWig GRCh38 released borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth, missing control alignments ENCFF585APC bigWig signal p-value ENCSR000EWL ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F4-human ENCAB000AFV DNA see document see document False 2011-10-29 ENCODE 2 ENCFF156NIH 375695521 ENCODE Processing Pipeline 8457dae80f81400cda6bac59c7bce974 https://www.encodeproject.org/files/ENCFF585APC/@@download/ENCFF585APC.bigWig GRCh38 released borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth, missing control alignments ENCFF440NAB bigWig signal p-value ENCSR000EWL ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F4-human ENCAB000AFV DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF156NIH, ENCFF613CDR 476453916 ENCODE Processing Pipeline 3c76cfa2f67b52dc589081c08323b079 https://www.encodeproject.org/files/ENCFF440NAB/@@download/ENCFF440NAB.bigWig GRCh38 released borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth, missing control alignments ENCFF510LNL bigWig fold change over control ENCSR000EWL ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F4-human ENCAB000AFV DNA see document see document False 2011-10-29 ENCODE 2 ENCFF156NIH 146734121 ENCODE Processing Pipeline dafaa36416f6f1386b520dc9ceaa4041 https://www.encodeproject.org/files/ENCFF510LNL/@@download/ENCFF510LNL.bigWig GRCh38 released borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth, missing control alignments ENCFF281NFW bed narrowPeak conservative idr thresholded peaks ENCSR000EWL ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F4-human ENCAB000AFV DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF121WVU, ENCFF419RSJ, ENCFF743VSN, ENCFF966QRE 154490 ENCODE Processing Pipeline 180c9cf0871e63104895b50fb7502871 https://www.encodeproject.org/files/ENCFF281NFW/@@download/ENCFF281NFW.bed.gz GRCh38 released borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth, missing control alignments ENCFF896WQY bigBed narrowPeak conservative idr thresholded peaks ENCSR000EWL ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F4-human ENCAB000AFV DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF281NFW 344490 ENCODE Processing Pipeline 83e77152bccb3110e69f1bebc5f75141 https://www.encodeproject.org/files/ENCFF896WQY/@@download/ENCFF896WQY.bigBed GRCh38 released borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth, missing control alignments ENCFF217ISJ bigBed narrowPeak optimal idr thresholded peaks ENCSR000EWL ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F4-human ENCAB000AFV DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF225TLP 370529 ENCODE Processing Pipeline 4a0d89bb208041dc5a2d738e92c17b53 https://www.encodeproject.org/files/ENCFF217ISJ/@@download/ENCFF217ISJ.bigBed GRCh38 released borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth, missing control alignments ENCFF743VSN bed narrowPeak peaks ENCSR000EWL ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F4-human ENCAB000AFV DNA see document see document False 2011-10-29 ENCODE 1 ENCFF613CDR 1335954 ENCODE Processing Pipeline 573a552819f8eb9966bb31b13bb05f02 https://www.encodeproject.org/files/ENCFF743VSN/@@download/ENCFF743VSN.bed.gz GRCh38 released borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth, missing control alignments ENCFF121WVU bed narrowPeak peaks ENCSR000EWL ChIP-seq EFO:0002067 K562 cell line Homo sapiens E2F4-human ENCAB000AFV DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF156NIH, ENCFF613CDR 4852043 ENCODE Processing Pipeline 1751ffb12bdaf32d0df7f276baf5551b https://www.encodeproject.org/files/ENCFF121WVU/@@download/ENCFF121WVU.bed.gz GRCh38 released borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth, missing control alignments ENCFF000YHF bigBed narrowPeak peaks ENCSR000DOA ChIP-seq EFO:0002067 K562 cell line Homo sapiens CCNT2-human ENCAB000AEY DNA see document see document False 2011-10-29 ENCODE ENCFF001VMF 2155344 Kevin Struhl, HMS 09aa26d494cb43fc800dea950111ad65 https://www.encodeproject.org/files/ENCFF000YHF/@@download/ENCFF000YHF.bigBed hg19 released mixed read lengths, low read length biological replicates with identical biosample insufficient read length ENCFF000YHG bam alignments ENCSR000DOA ChIP-seq EFO:0002067 K562 cell line Homo sapiens CCNT2-human ENCAB000AEY DNA see document see document False 2011-10-29 ENCODE 1 ENCFF000YHY 174407334 Kevin Struhl, HMS 6da64e128bc85b81a9aca726c52d2e49 https://www.encodeproject.org/files/ENCFF000YHG/@@download/ENCFF000YHG.bam hg19 released mixed read lengths, low read length biological replicates with identical biosample insufficient read length ENCFF000YHH bam alignments ENCSR000DOA ChIP-seq EFO:0002067 K562 cell line Homo sapiens CCNT2-human ENCAB000AEY DNA see document see document False 2011-10-29 ENCODE 2 ENCFF000YHX 349721276 Kevin Struhl, HMS 79ff0c0fa0512e1340a9f8b125762807 https://www.encodeproject.org/files/ENCFF000YHH/@@download/ENCFF000YHH.bam hg19 released mixed read lengths, low read length biological replicates with identical biosample insufficient read length ENCFF000YHI bigWig signal ENCSR000DOA ChIP-seq EFO:0002067 K562 cell line Homo sapiens CCNT2-human ENCAB000AEY DNA see document see document False 2011-10-29 ENCODE 323864579 Kevin Struhl, HMS 16ed62b911a02c3f07096b88ce476d3b https://www.encodeproject.org/files/ENCFF000YHI/@@download/ENCFF000YHI.bigWig hg19 released mixed read lengths, low read length biological replicates with identical biosample, missing derived_from insufficient read length ENCFF000YHX fastq reads ENCSR000DOA ChIP-seq EFO:0002067 K562 cell line Homo sapiens CCNT2-human ENCAB000AEY DNA see document see document False 2011-10-29 ENCODE 2 1 36 single-ended 996457214 Kevin Struhl, HMS a045579dd4e76048510aa8377e441f35 https://www.encodeproject.org/files/ENCFF000YHX/@@download/ENCFF000YHX.fastq.gz Illumina Genome Analyzer /files/ENCFF000YRC/ released mixed read lengths, inconsistent control read length, low read length biological replicates with identical biosample insufficient read length ENCFF000YHY fastq reads ENCSR000DOA ChIP-seq EFO:0002067 K562 cell line Homo sapiens CCNT2-human ENCAB000AEY DNA see document see document False 2011-10-29 ENCODE 1 1 27 single-ended 343182883 Kevin Struhl, HMS d204ec18d752c4309b35396f9e0b0805 https://www.encodeproject.org/files/ENCFF000YHY/@@download/ENCFF000YHY.fastq.gz Illumina Genome Analyzer /files/ENCFF000YRN/ released mixed read lengths, low read length biological replicates with identical biosample insufficient read length ENCFF001VMF bed narrowPeak peaks ENCSR000DOA ChIP-seq EFO:0002067 K562 cell line Homo sapiens CCNT2-human ENCAB000AEY DNA see document see document False 2011-10-29 ENCODE 839229 Kevin Struhl, HMS 2c31d012aa97330d5e1b6cf2f24ebd8b https://www.encodeproject.org/files/ENCFF001VMF/@@download/ENCFF001VMF.bed.gz hg19 released mixed read lengths, low read length biological replicates with identical biosample, missing derived_from insufficient read length ENCFF002CVU bed narrowPeak optimal idr thresholded peaks ENCSR000DOA ChIP-seq EFO:0002067 K562 cell line Homo sapiens CCNT2-human ENCAB000AEY DNA see document see document False 2011-10-29 ENCODE 478673 ENCODE Consortium Analysis Working Group 32c2e57570701d01ddb5dfa07e83b726 https://www.encodeproject.org/files/ENCFF002CVU/@@download/ENCFF002CVU.bed.gz hg19 released mixed read lengths, low read length biological replicates with identical biosample, missing derived_from insufficient read length ENCFF608OGE bigBed narrowPeak optimal idr thresholded peaks ENCSR000DOA ChIP-seq EFO:0002067 K562 cell line Homo sapiens CCNT2-human ENCAB000AEY DNA see document see document False 2011-10-29 ENCODE ENCFF002CVU 1235466 ENCODE Consortium 0194def898eaf4beb236a54260436071 https://www.encodeproject.org/files/ENCFF608OGE/@@download/ENCFF608OGE.bigBed hg19 released mixed read lengths, low read length biological replicates with identical biosample insufficient read length ENCFF000YZD bam alignments ENCSR000DOH ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIRT6-human ENCAB000AKT DNA see document see document False 2011-10-29 ENCODE 1 ENCFF000YZT 888150945 Kevin Struhl, HMS f89edea95e1d8af854421e90b6842d7a https://www.encodeproject.org/files/ENCFF000YZD/@@download/ENCFF000YZD.bam hg19 released biological replicates with identical biosample insufficient read length ENCFF000YZE bam alignments ENCSR000DOH ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIRT6-human ENCAB000AKT DNA see document see document False 2011-10-29 ENCODE 2 ENCFF000YZS 850930514 Kevin Struhl, HMS 19b5db27dc65d827df791f5268d62140 https://www.encodeproject.org/files/ENCFF000YZE/@@download/ENCFF000YZE.bam hg19 released biological replicates with identical biosample insufficient read length ENCFF000YZF bigBed narrowPeak peaks ENCSR000DOH ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIRT6-human ENCAB000AKT DNA see document see document False 2011-10-29 ENCODE ENCFF001VOR 96120 Kevin Struhl, HMS e3e0c46fc49cd0574659d6fee4122818 https://www.encodeproject.org/files/ENCFF000YZF/@@download/ENCFF000YZF.bigBed hg19 released biological replicates with identical biosample insufficient read length ENCFF000YZG bigWig signal ENCSR000DOH ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIRT6-human ENCAB000AKT DNA see document see document False 2011-10-29 ENCODE 380324231 Kevin Struhl, HMS 36761ef5b27aa91da8a5c475699f8b7f https://www.encodeproject.org/files/ENCFF000YZG/@@download/ENCFF000YZG.bigWig hg19 released biological replicates with identical biosample, missing derived_from insufficient read length ENCFF000YZS fastq reads ENCSR000DOH ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIRT6-human ENCAB000AKT DNA see document see document False 2011-10-29 ENCODE 2 1 34 single-ended 696677860 Kevin Struhl, HMS 61d830fa023f177819458534ad23fb26 https://www.encodeproject.org/files/ENCFF000YZS/@@download/ENCFF000YZS.fastq.gz Illumina Genome Analyzer /files/ENCFF000YRC/ released inconsistent control read length biological replicates with identical biosample insufficient read length ENCFF000YZT fastq reads ENCSR000DOH ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIRT6-human ENCAB000AKT DNA see document see document False 2011-10-29 ENCODE 1 1 34 single-ended 732547020 Kevin Struhl, HMS bba6e95a018d2007131ad94b955d38d0 https://www.encodeproject.org/files/ENCFF000YZT/@@download/ENCFF000YZT.fastq.gz Illumina Genome Analyzer /files/ENCFF000YRN/ released inconsistent control read length biological replicates with identical biosample insufficient read length ENCFF001VOR bed narrowPeak peaks ENCSR000DOH ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIRT6-human ENCAB000AKT DNA see document see document False 2011-10-29 ENCODE 11275 Kevin Struhl, HMS 4b8fa5ee502da30b76a77d4a727c3bc9 https://www.encodeproject.org/files/ENCFF001VOR/@@download/ENCFF001VOR.bed.gz hg19 released biological replicates with identical biosample, missing derived_from insufficient read length ENCFF002CXZ bed narrowPeak optimal idr thresholded peaks ENCSR000DOH ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIRT6-human ENCAB000AKT DNA see document see document False 2011-10-29 ENCODE 59038 ENCODE Consortium Analysis Working Group a4825e3644d78fd762ac3b567f9c698a https://www.encodeproject.org/files/ENCFF002CXZ/@@download/ENCFF002CXZ.bed.gz hg19 released biological replicates with identical biosample, missing derived_from insufficient read length ENCFF144SVY bigBed narrowPeak optimal idr thresholded peaks ENCSR000DOH ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIRT6-human ENCAB000AKT DNA see document see document False 2011-10-29 ENCODE ENCFF002CXZ 190797 ENCODE Consortium 39a45a8a6ae45ac7bf6cb9c653b73c2e https://www.encodeproject.org/files/ENCFF144SVY/@@download/ENCFF144SVY.bigBed hg19 released biological replicates with identical biosample insufficient read length ENCFF000YMV fastq reads ENCSR000EWM ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATA1-human ENCAB000AGS DNA see document see document False 2011-10-29 ENCODE 1 1 32 single-ended 227514380 Peggy Farnham, USC 0d4c09997c4b4a9d6defa529cca253cc https://www.encodeproject.org/files/ENCFF000YMV/@@download/ENCFF000YMV.fastq.gz Illumina Genome Analyzer /files/ENCFF000VEK/ released borderline replicate concordance, inconsistent control read length biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth, missing control alignments ENCFF000YMX bigBed narrowPeak peaks ENCSR000EWM ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATA1-human ENCAB000AGS DNA see document see document False 2011-10-29 ENCODE ENCFF001VNC 148120 Peggy Farnham, USC 5d0104ae078ef787089a467c655010e6 https://www.encodeproject.org/files/ENCFF000YMX/@@download/ENCFF000YMX.bigBed hg19 archived borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth, missing control alignments ENCFF000YMY bigWig signal ENCSR000EWM ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATA1-human ENCAB000AGS DNA see document see document False 2011-10-29 ENCODE 293081426 Peggy Farnham, USC 2ac456aa88ad4be89e76a1be46a0c51b https://www.encodeproject.org/files/ENCFF000YMY/@@download/ENCFF000YMY.bigWig hg19 archived borderline replicate concordance biological replicates with identical biosample, missing derived_from insufficient read length, insufficient read depth extremely low read depth, missing control alignments ENCFF000YMZ bam alignments ENCSR000EWM ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATA1-human ENCAB000AGS DNA see document see document False 2011-10-29 ENCODE 1 ENCFF000YMV 307966177 Peggy Farnham, USC b4a2c68e08103da1116ff96817f55bb5 https://www.encodeproject.org/files/ENCFF000YMZ/@@download/ENCFF000YMZ.bam hg19 archived borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth, missing control alignments ENCFF000YNA bam alignments ENCSR000EWM ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATA1-human ENCAB000AGS DNA see document see document False 2011-10-29 ENCODE 2 ENCFF000YNM 458637798 Peggy Farnham, USC 92eac1a5d2aa6c0bf4b49c132fa1c073 https://www.encodeproject.org/files/ENCFF000YNA/@@download/ENCFF000YNA.bam hg19 archived borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth, missing control alignments ENCFF000YNM fastq reads ENCSR000EWM ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATA1-human ENCAB000AGS DNA see document see document False 2011-10-29 ENCODE 2 1 32 single-ended 357845224 Peggy Farnham, USC 8eb5c82c5778a572723ce86425cb433e https://www.encodeproject.org/files/ENCFF000YNM/@@download/ENCFF000YNM.fastq.gz Illumina Genome Analyzer /files/ENCFF000VEK/ released borderline replicate concordance, inconsistent control read length biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth, missing control alignments ENCFF001VNC bed narrowPeak peaks ENCSR000EWM ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATA1-human ENCAB000AGS DNA see document see document False 2011-10-29 ENCODE 39459 Peggy Farnham, USC 0e1575e9d786484b0ea7761c0ce167c6 https://www.encodeproject.org/files/ENCFF001VNC/@@download/ENCFF001VNC.bed.gz hg19 archived borderline replicate concordance biological replicates with identical biosample, missing derived_from insufficient read length, insufficient read depth extremely low read depth, missing control alignments ENCFF002CWP bed narrowPeak optimal idr thresholded peaks ENCSR000EWM ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATA1-human ENCAB000AGS DNA see document see document False 2011-10-29 ENCODE 80803 ENCODE Consortium Analysis Working Group cd1050d97484e1762c9332c2fe2467ac https://www.encodeproject.org/files/ENCFF002CWP/@@download/ENCFF002CWP.bed.gz hg19 archived borderline replicate concordance biological replicates with identical biosample, missing derived_from insufficient read length, insufficient read depth extremely low read depth, missing control alignments ENCFF250TTQ bigBed narrowPeak optimal idr thresholded peaks ENCSR000EWM ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATA1-human ENCAB000AGS DNA see document see document False 2011-10-29 ENCODE ENCFF002CWP 180592 ENCODE Consortium 73e56757f80e14ebf08dd4c68c11b68b https://www.encodeproject.org/files/ENCFF250TTQ/@@download/ENCFF250TTQ.bigBed hg19 archived borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth, missing control alignments ENCFF806OWK bam unfiltered alignments ENCSR000EWM ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATA1-human ENCAB000AGS DNA see document see document False 2011-10-29 ENCODE 1 32 ENCFF000YMV, ENCFF643CGH 241042617 ENCODE Processing Pipeline 92a5c88cc991ddc4f368cd34445b0cfd https://www.encodeproject.org/files/ENCFF806OWK/@@download/ENCFF806OWK.bam GRCh38 released borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth, missing control alignments ENCFF642RHD bam alignments ENCSR000EWM ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATA1-human ENCAB000AGS DNA see document see document False 2011-10-29 ENCODE 1 32 ENCFF000YMV, ENCFF643CGH 134875210 ENCODE Processing Pipeline 3c6c95bbbcd50a50d3d7d09d97805e25 https://www.encodeproject.org/files/ENCFF642RHD/@@download/ENCFF642RHD.bam GRCh38 released borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth, missing control alignments ENCFF622HIJ bam unfiltered alignments ENCSR000EWM ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATA1-human ENCAB000AGS DNA see document see document False 2011-10-29 ENCODE 2 32 ENCFF000YNM, ENCFF643CGH 461383136 ENCODE Processing Pipeline 01b448091b0d254a11f635b45648d6e3 https://www.encodeproject.org/files/ENCFF622HIJ/@@download/ENCFF622HIJ.bam GRCh38 released borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth, missing control alignments ENCFF788ICY bam alignments ENCSR000EWM ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATA1-human ENCAB000AGS DNA see document see document False 2011-10-29 ENCODE 2 32 ENCFF000YNM, ENCFF643CGH 287789880 ENCODE Processing Pipeline f4a5760806922d80838b7c5e3e6695bf https://www.encodeproject.org/files/ENCFF788ICY/@@download/ENCFF788ICY.bam GRCh38 released borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth, missing control alignments ENCFF980WWQ bam unfiltered alignments ENCSR000EWM ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATA1-human ENCAB000AGS DNA see document see document False 2011-10-29 ENCODE 2 32 ENCFF000YNM, ENCFF807MUK 459687858 ENCODE Processing Pipeline aaea7fa12755e6d734b42f862afa8c4d https://www.encodeproject.org/files/ENCFF980WWQ/@@download/ENCFF980WWQ.bam hg19 released borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth, missing control alignments ENCFF619NHO bam unfiltered alignments ENCSR000EWM ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATA1-human ENCAB000AGS DNA see document see document False 2011-10-29 ENCODE 1 32 ENCFF000YMV, ENCFF807MUK 240381831 ENCODE Processing Pipeline 9161442f7bf531dae76752381b40ff46 https://www.encodeproject.org/files/ENCFF619NHO/@@download/ENCFF619NHO.bam hg19 released borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth, missing control alignments ENCFF461UBM bam alignments ENCSR000EWM ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATA1-human ENCAB000AGS DNA see document see document False 2011-10-29 ENCODE 1 32 ENCFF000YMV, ENCFF807MUK 135030508 ENCODE Processing Pipeline 6f3c994e2d414780e18da686b90cf685 https://www.encodeproject.org/files/ENCFF461UBM/@@download/ENCFF461UBM.bam hg19 released borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth, missing control alignments ENCFF465DSP bam alignments ENCSR000EWM ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATA1-human ENCAB000AGS DNA see document see document False 2011-10-29 ENCODE 2 32 ENCFF000YNM, ENCFF807MUK 288049568 ENCODE Processing Pipeline 07ecb237a52454fb3f8dd44beb2a6ecb https://www.encodeproject.org/files/ENCFF465DSP/@@download/ENCFF465DSP.bam hg19 released borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth, missing control alignments ENCFF077JWE bigWig signal p-value ENCSR000EWM ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATA1-human ENCAB000AGS DNA see document see document False 2011-10-29 ENCODE 1 ENCFF051ZZR, ENCFF461UBM 326936308 ENCODE Processing Pipeline 514dfb90c9acf35eb5d9c6205c34ee57 https://www.encodeproject.org/files/ENCFF077JWE/@@download/ENCFF077JWE.bigWig hg19 released borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth, missing control alignments ENCFF697OYK bigWig signal p-value ENCSR000EWM ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATA1-human ENCAB000AGS DNA see document see document False 2011-10-29 ENCODE 1 ENCFF642RHD 350504651 ENCODE Processing Pipeline 66a9c93ab195f969cfb157e850097d46 https://www.encodeproject.org/files/ENCFF697OYK/@@download/ENCFF697OYK.bigWig GRCh38 released borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth, missing control alignments ENCFF132WHW bigWig signal p-value ENCSR000EWM ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATA1-human ENCAB000AGS DNA see document see document False 2011-10-29 ENCODE 2 ENCFF051ZZR, ENCFF465DSP 344247764 ENCODE Processing Pipeline 9a8b58de631866ac3e3856da30e95690 https://www.encodeproject.org/files/ENCFF132WHW/@@download/ENCFF132WHW.bigWig hg19 released borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth, missing control alignments ENCFF226FPS bigWig fold change over control ENCSR000EWM ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATA1-human ENCAB000AGS DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF051ZZR, ENCFF461UBM, ENCFF465DSP 282197447 ENCODE Processing Pipeline 3d44d8dfe039ca9dad741936cde7fa98 https://www.encodeproject.org/files/ENCFF226FPS/@@download/ENCFF226FPS.bigWig hg19 released borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth, missing control alignments ENCFF484BSF bed narrowPeak conservative idr thresholded peaks ENCSR000EWM ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATA1-human ENCAB000AGS DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF226NEO, ENCFF419RSJ, ENCFF788ZKH, ENCFF868CAQ 49216 ENCODE Processing Pipeline 1ea7dc96438af4d51a29151a5a889fc2 https://www.encodeproject.org/files/ENCFF484BSF/@@download/ENCFF484BSF.bed.gz GRCh38 released borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth, missing control alignments ENCFF122AWO bigWig signal p-value ENCSR000EWM ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATA1-human ENCAB000AGS DNA see document see document False 2011-10-29 ENCODE 2 ENCFF788ICY 391615463 ENCODE Processing Pipeline d01a79cdc0034c0665975d2051ad4648 https://www.encodeproject.org/files/ENCFF122AWO/@@download/ENCFF122AWO.bigWig GRCh38 released borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth, missing control alignments ENCFF137ORG bigWig fold change over control ENCSR000EWM ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATA1-human ENCAB000AGS DNA see document see document False 2011-10-29 ENCODE 2 ENCFF051ZZR, ENCFF465DSP 212035891 ENCODE Processing Pipeline 7c06d10fa0dad51a524d3ccb452754db https://www.encodeproject.org/files/ENCFF137ORG/@@download/ENCFF137ORG.bigWig hg19 released borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth, missing control alignments ENCFF236AJI bigBed narrowPeak optimal idr thresholded peaks ENCSR000EWM ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATA1-human ENCAB000AGS DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF659WGE 166807 ENCODE Processing Pipeline af436e4b8ec8fd926b87b356f129788a https://www.encodeproject.org/files/ENCFF236AJI/@@download/ENCFF236AJI.bigBed hg19 released borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth, missing control alignments ENCFF072KHT bigWig fold change over control ENCSR000EWM ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATA1-human ENCAB000AGS DNA see document see document False 2011-10-29 ENCODE 1 ENCFF051ZZR, ENCFF461UBM 113600533 ENCODE Processing Pipeline e1704a857fd411718644a9ea6e4f930f https://www.encodeproject.org/files/ENCFF072KHT/@@download/ENCFF072KHT.bigWig hg19 released borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth, missing control alignments ENCFF584MRX bigWig fold change over control ENCSR000EWM ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATA1-human ENCAB000AGS DNA see document see document False 2011-10-29 ENCODE 1 ENCFF642RHD 113466657 ENCODE Processing Pipeline fcec82671632e219edb5b7f79a887899 https://www.encodeproject.org/files/ENCFF584MRX/@@download/ENCFF584MRX.bigWig GRCh38 released borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth, missing control alignments ENCFF728HPG bigWig fold change over control ENCSR000EWM ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATA1-human ENCAB000AGS DNA see document see document False 2011-10-29 ENCODE 2 ENCFF788ICY 211615444 ENCODE Processing Pipeline ec6bbeb028ef26d2de245cb6c87b6e27 https://www.encodeproject.org/files/ENCFF728HPG/@@download/ENCFF728HPG.bigWig GRCh38 released borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth, missing control alignments ENCFF597BEG bigBed narrowPeak peaks ENCSR000EWM ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATA1-human ENCAB000AGS DNA see document see document False 2011-10-29 ENCODE 1 ENCFF281ONW 2928546 ENCODE Processing Pipeline d4064facb93878c61a21465fb1778801 https://www.encodeproject.org/files/ENCFF597BEG/@@download/ENCFF597BEG.bigBed hg19 released borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth, missing control alignments ENCFF531DEC bigBed narrowPeak peaks ENCSR000EWM ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATA1-human ENCAB000AGS DNA see document see document False 2011-10-29 ENCODE 2 ENCFF942MUF 8693574 ENCODE Processing Pipeline c51209698830d9f58bb35e075c1d1932 https://www.encodeproject.org/files/ENCFF531DEC/@@download/ENCFF531DEC.bigBed hg19 released borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth, missing control alignments ENCFF613UTV bigBed narrowPeak peaks ENCSR000EWM ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATA1-human ENCAB000AGS DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF830VFD 10678904 ENCODE Processing Pipeline e2c0c3e9f2064fef2b8ad58da6b58eba https://www.encodeproject.org/files/ENCFF613UTV/@@download/ENCFF613UTV.bigBed hg19 released borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth, missing control alignments ENCFF355CBE bigBed narrowPeak conservative idr thresholded peaks ENCSR000EWM ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATA1-human ENCAB000AGS DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF715NLX 137555 ENCODE Processing Pipeline 4ba45e0fa29107f1717e8e2585c366de https://www.encodeproject.org/files/ENCFF355CBE/@@download/ENCFF355CBE.bigBed hg19 released borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth, missing control alignments ENCFF659WGE bed narrowPeak optimal idr thresholded peaks ENCSR000EWM ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATA1-human ENCAB000AGS DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF001TDO, ENCFF281ONW, ENCFF830VFD, ENCFF942MUF 69686 ENCODE Processing Pipeline 1173386ed1cdefa8840fec380d4ffbde https://www.encodeproject.org/files/ENCFF659WGE/@@download/ENCFF659WGE.bed.gz hg19 released borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth, missing control alignments ENCFF045EJS bigBed narrowPeak peaks ENCSR000EWM ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATA1-human ENCAB000AGS DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF226NEO 10419740 ENCODE Processing Pipeline 5847c270e8e77354ffa7436949d8f086 https://www.encodeproject.org/files/ENCFF045EJS/@@download/ENCFF045EJS.bigBed GRCh38 released borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth, missing control alignments ENCFF616ZFJ bigWig signal p-value ENCSR000EWM ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATA1-human ENCAB000AGS DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF051ZZR, ENCFF461UBM, ENCFF465DSP 478303620 ENCODE Processing Pipeline d131120940afa891621d7bca6e588d9d https://www.encodeproject.org/files/ENCFF616ZFJ/@@download/ENCFF616ZFJ.bigWig hg19 released borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth, missing control alignments ENCFF458IZL bigWig signal p-value ENCSR000EWM ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATA1-human ENCAB000AGS DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF642RHD, ENCFF788ICY 396229985 ENCODE Processing Pipeline b2f500e4b86cc6e6d0e52151ee54f0cd https://www.encodeproject.org/files/ENCFF458IZL/@@download/ENCFF458IZL.bigWig GRCh38 released borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth, missing control alignments ENCFF634GPP bigWig fold change over control ENCSR000EWM ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATA1-human ENCAB000AGS DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF642RHD, ENCFF788ICY 282560274 ENCODE Processing Pipeline 19909b3363e2cc12da0d9f59764ba33e https://www.encodeproject.org/files/ENCFF634GPP/@@download/ENCFF634GPP.bigWig GRCh38 released borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth, missing control alignments ENCFF226NEO bed narrowPeak peaks ENCSR000EWM ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATA1-human ENCAB000AGS DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF642RHD, ENCFF788ICY 4240372 ENCODE Processing Pipeline faa9a2be4be03d9e8efbd10e32e49d36 https://www.encodeproject.org/files/ENCFF226NEO/@@download/ENCFF226NEO.bed.gz GRCh38 released borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth, missing control alignments ENCFF715NLX bed narrowPeak conservative idr thresholded peaks ENCSR000EWM ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATA1-human ENCAB000AGS DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF001TDO, ENCFF281ONW, ENCFF830VFD, ENCFF942MUF 49036 ENCODE Processing Pipeline 376b527bc099c180f65bec7fb4ae1352 https://www.encodeproject.org/files/ENCFF715NLX/@@download/ENCFF715NLX.bed.gz hg19 released borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth, missing control alignments ENCFF891DGY bigBed narrowPeak peaks ENCSR000EWM ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATA1-human ENCAB000AGS DNA see document see document False 2011-10-29 ENCODE 1 ENCFF868CAQ 2818010 ENCODE Processing Pipeline db77e28f04089497208eb3f36ff30458 https://www.encodeproject.org/files/ENCFF891DGY/@@download/ENCFF891DGY.bigBed GRCh38 released borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth, missing control alignments ENCFF116UFO bigBed narrowPeak peaks ENCSR000EWM ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATA1-human ENCAB000AGS DNA see document see document False 2011-10-29 ENCODE 2 ENCFF788ZKH 8544457 ENCODE Processing Pipeline ff4fdb713426a4ead9aa6cb9acf6e53b https://www.encodeproject.org/files/ENCFF116UFO/@@download/ENCFF116UFO.bigBed GRCh38 released borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth, missing control alignments ENCFF266EKT bigBed narrowPeak conservative idr thresholded peaks ENCSR000EWM ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATA1-human ENCAB000AGS DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF484BSF 138560 ENCODE Processing Pipeline 46f8aece23254fa6bfd966c294d2165c https://www.encodeproject.org/files/ENCFF266EKT/@@download/ENCFF266EKT.bigBed GRCh38 released borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth, missing control alignments ENCFF811YFQ bigBed narrowPeak optimal idr thresholded peaks ENCSR000EWM ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATA1-human ENCAB000AGS DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF576YJD 168271 ENCODE Processing Pipeline 17e763250c5ef0d51f3b777d2a98a7b6 https://www.encodeproject.org/files/ENCFF811YFQ/@@download/ENCFF811YFQ.bigBed GRCh38 released borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth, missing control alignments ENCFF576YJD bed narrowPeak optimal idr thresholded peaks ENCSR000EWM ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATA1-human ENCAB000AGS DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF226NEO, ENCFF419RSJ, ENCFF788ZKH, ENCFF868CAQ 71091 ENCODE Processing Pipeline 0e027d8aeed6a6ee8da9d4e88cf23ab4 https://www.encodeproject.org/files/ENCFF576YJD/@@download/ENCFF576YJD.bed.gz GRCh38 released borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth, missing control alignments ENCFF281ONW bed narrowPeak peaks ENCSR000EWM ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATA1-human ENCAB000AGS DNA see document see document False 2011-10-29 ENCODE 1 ENCFF051ZZR, ENCFF461UBM 1358195 ENCODE Processing Pipeline 99965bf4d8aaec0d25e61565757d4476 https://www.encodeproject.org/files/ENCFF281ONW/@@download/ENCFF281ONW.bed.gz hg19 released borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth, missing control alignments ENCFF942MUF bed narrowPeak peaks ENCSR000EWM ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATA1-human ENCAB000AGS DNA see document see document False 2011-10-29 ENCODE 2 ENCFF051ZZR, ENCFF465DSP 3449310 ENCODE Processing Pipeline c6502e4f08098ed2b9766c2dfff6b5c2 https://www.encodeproject.org/files/ENCFF942MUF/@@download/ENCFF942MUF.bed.gz hg19 released borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth, missing control alignments ENCFF830VFD bed narrowPeak peaks ENCSR000EWM ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATA1-human ENCAB000AGS DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF051ZZR, ENCFF461UBM, ENCFF465DSP 4532459 ENCODE Processing Pipeline 9978ba134c5d3cb344a45f38e35ec117 https://www.encodeproject.org/files/ENCFF830VFD/@@download/ENCFF830VFD.bed.gz hg19 released borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth, missing control alignments ENCFF788ZKH bed narrowPeak peaks ENCSR000EWM ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATA1-human ENCAB000AGS DNA see document see document False 2011-10-29 ENCODE 2 ENCFF788ICY 3392356 ENCODE Processing Pipeline 3993f1f084d6b9982cf3e2402ca607c9 https://www.encodeproject.org/files/ENCFF788ZKH/@@download/ENCFF788ZKH.bed.gz GRCh38 released borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth, missing control alignments ENCFF868CAQ bed narrowPeak peaks ENCSR000EWM ChIP-seq EFO:0002067 K562 cell line Homo sapiens GATA1-human ENCAB000AGS DNA see document see document False 2011-10-29 ENCODE 1 ENCFF642RHD 1281589 ENCODE Processing Pipeline 33cefd5294d7a53c2b52b847bc25548a https://www.encodeproject.org/files/ENCFF868CAQ/@@download/ENCFF868CAQ.bed.gz GRCh38 released borderline replicate concordance biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth, missing control alignments ENCFF000YPI fastq reads ENCSR000FAU ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 1 1 27 single-ended 611296990 Sherman Weissman, Yale 42e1435ddff35f6133dbd8384e37583e https://www.encodeproject.org/files/ENCFF000YPI/@@download/ENCFF000YPI.fastq.gz Illumina Genome Analyzer /files/ENCFF000YPF/ released borderline replicate concordance, control low read depth, inconsistent control read length biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF000YPJ fastq reads ENCSR000FAU ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 2 1 27 single-ended 608955614 Sherman Weissman, Yale d07e36412c97ff92bfaaba96e8c00872 https://www.encodeproject.org/files/ENCFF000YPJ/@@download/ENCFF000YPJ.fastq.gz Illumina Genome Analyzer /files/ENCFF000YPF/ released borderline replicate concordance, control low read depth, inconsistent control read length biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF000YZR bam alignments ENCSR000FAU ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 1 ENCFF000YPI 802371806 Sherman Weissman, Yale a7d9277447dd724bb7a21d510dfa1256 https://www.encodeproject.org/files/ENCFF000YZR/@@download/ENCFF000YZR.bam hg19 archived borderline replicate concordance, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF000YZU bigBed narrowPeak peaks ENCSR000FAU ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE ENCFF001VOU 100701 Sherman Weissman, Yale 20e136fc38961ae106a4cd95e4981852 https://www.encodeproject.org/files/ENCFF000YZU/@@download/ENCFF000YZU.bigBed hg19 archived borderline replicate concordance, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF000YZV bigWig signal ENCSR000FAU ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 343934342 Sherman Weissman, Yale 054fdc4e5f2ed73506875204343aadfa https://www.encodeproject.org/files/ENCFF000YZV/@@download/ENCFF000YZV.bigWig hg19 archived borderline replicate concordance, control low read depth biological replicates with identical biosample, missing derived_from insufficient read length, insufficient read depth ENCFF000YZW bam alignments ENCSR000FAU ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 2 ENCFF000YPJ 763292037 Sherman Weissman, Yale 5b142d0df3fbabcc44dd3f7fdad79127 https://www.encodeproject.org/files/ENCFF000YZW/@@download/ENCFF000YZW.bam hg19 archived borderline replicate concordance, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF001VOU bed narrowPeak peaks ENCSR000FAU ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 9245 Sherman Weissman, Yale 393ddc6c51b4af7c63d36664c0020a0f https://www.encodeproject.org/files/ENCFF001VOU/@@download/ENCFF001VOU.bed.gz hg19 archived borderline replicate concordance, control low read depth biological replicates with identical biosample, missing derived_from insufficient read length, insufficient read depth ENCFF002CYC bed narrowPeak optimal idr thresholded peaks ENCSR000FAU ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 37650 ENCODE Consortium Analysis Working Group bb6587b53d0ad228531645c844e82661 https://www.encodeproject.org/files/ENCFF002CYC/@@download/ENCFF002CYC.bed.gz hg19 archived borderline replicate concordance, control low read depth biological replicates with identical biosample, missing derived_from insufficient read length, insufficient read depth ENCFF548RAO bigBed narrowPeak optimal idr thresholded peaks ENCSR000FAU ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE ENCFF002CYC 152373 ENCODE Consortium cae54e5674f7ec1d42a20f051c933125 https://www.encodeproject.org/files/ENCFF548RAO/@@download/ENCFF548RAO.bigBed hg19 archived borderline replicate concordance, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF719TZE bam unfiltered alignments ENCSR000FAU ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 1 27 ENCFF000YPI, ENCFF643CGH 806370813 ENCODE Processing Pipeline 28838890cb63373d13aefe2cd9c59c77 https://www.encodeproject.org/files/ENCFF719TZE/@@download/ENCFF719TZE.bam GRCh38 released borderline replicate concordance, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF089XMI bam alignments ENCSR000FAU ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 1 27 ENCFF000YPI, ENCFF643CGH 321446364 ENCODE Processing Pipeline 58ed0509c198f7cc1b6b78bac4af5ca8 https://www.encodeproject.org/files/ENCFF089XMI/@@download/ENCFF089XMI.bam GRCh38 released borderline replicate concordance, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF049QLA bam unfiltered alignments ENCSR000FAU ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 2 27 ENCFF000YPJ, ENCFF807MUK 763798136 ENCODE Processing Pipeline 424a23db4f1cccf8ea108c3567c7219d https://www.encodeproject.org/files/ENCFF049QLA/@@download/ENCFF049QLA.bam hg19 released borderline replicate concordance, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF636ISQ bam alignments ENCSR000FAU ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 2 27 ENCFF000YPJ, ENCFF807MUK 259788558 ENCODE Processing Pipeline 438e61d5e9f744d17eb806ecc405dbf2 https://www.encodeproject.org/files/ENCFF636ISQ/@@download/ENCFF636ISQ.bam hg19 released borderline replicate concordance, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF637WLB bam unfiltered alignments ENCSR000FAU ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 1 27 ENCFF000YPI, ENCFF807MUK 803370909 ENCODE Processing Pipeline 4092ae3d0e40210ef4f2386c4d26c863 https://www.encodeproject.org/files/ENCFF637WLB/@@download/ENCFF637WLB.bam hg19 released borderline replicate concordance, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF457SCP bam alignments ENCSR000FAU ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 1 27 ENCFF000YPI, ENCFF807MUK 321840886 ENCODE Processing Pipeline 4f01a3e97009032300a1c0208eeb69f0 https://www.encodeproject.org/files/ENCFF457SCP/@@download/ENCFF457SCP.bam hg19 released borderline replicate concordance, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF263PLG bam alignments ENCSR000FAU ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 2 27 ENCFF000YPJ, ENCFF643CGH 259462570 ENCODE Processing Pipeline 12078df06f1d3d9af7bd0f2529dcff5d https://www.encodeproject.org/files/ENCFF263PLG/@@download/ENCFF263PLG.bam GRCh38 released borderline replicate concordance, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF333RBO bam unfiltered alignments ENCSR000FAU ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 2 27 ENCFF000YPJ, ENCFF643CGH 765439411 ENCODE Processing Pipeline c7d4304e2960bcbaacb671a3f6667e07 https://www.encodeproject.org/files/ENCFF333RBO/@@download/ENCFF333RBO.bam GRCh38 released borderline replicate concordance, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF207KLI bigWig signal p-value ENCSR000FAU ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 1 ENCFF457SCP, ENCFF998GMZ 243575216 ENCODE Processing Pipeline 557a4a60c2bb5e23f9acd43e89ba1d5e https://www.encodeproject.org/files/ENCFF207KLI/@@download/ENCFF207KLI.bigWig hg19 released borderline replicate concordance, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF967SKX bigWig signal p-value ENCSR000FAU ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF457SCP, ENCFF636ISQ, ENCFF998GMZ 286727723 ENCODE Processing Pipeline ef284d9a39fb09188d4e294baa156991 https://www.encodeproject.org/files/ENCFF967SKX/@@download/ENCFF967SKX.bigWig hg19 released borderline replicate concordance, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF889EDK bigWig signal p-value ENCSR000FAU ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 2 ENCFF636ISQ, ENCFF998GMZ 235077167 ENCODE Processing Pipeline 0c18ede2200b7ecd3cdc39fd9f7a8d5c https://www.encodeproject.org/files/ENCFF889EDK/@@download/ENCFF889EDK.bigWig hg19 released borderline replicate concordance, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF676CZF bigWig fold change over control ENCSR000FAU ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 1 ENCFF457SCP, ENCFF998GMZ 154032093 ENCODE Processing Pipeline 699872aea40f8205a36c20f66f8cdbf8 https://www.encodeproject.org/files/ENCFF676CZF/@@download/ENCFF676CZF.bigWig hg19 released borderline replicate concordance, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF346XAR bigWig fold change over control ENCSR000FAU ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 2 ENCFF636ISQ, ENCFF998GMZ 125993561 ENCODE Processing Pipeline 5f97bc395a1b2be6c0440f534a47a34b https://www.encodeproject.org/files/ENCFF346XAR/@@download/ENCFF346XAR.bigWig hg19 released borderline replicate concordance, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF122VCZ bigWig fold change over control ENCSR000FAU ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF457SCP, ENCFF636ISQ, ENCFF998GMZ 249603240 ENCODE Processing Pipeline 7fdd264c0d965cef941dc02d37f5b734 https://www.encodeproject.org/files/ENCFF122VCZ/@@download/ENCFF122VCZ.bigWig hg19 released borderline replicate concordance, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF873CLE bed narrowPeak peaks ENCSR000FAU ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 1 ENCFF457SCP, ENCFF998GMZ 2276128 ENCODE Processing Pipeline 41c577d36fc12da6bd7db479b80ba431 https://www.encodeproject.org/files/ENCFF873CLE/@@download/ENCFF873CLE.bed.gz hg19 released borderline replicate concordance, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF081YAN bed narrowPeak peaks ENCSR000FAU ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 2 ENCFF636ISQ, ENCFF998GMZ 2161600 ENCODE Processing Pipeline 2ff4a5f8741d7d3809aec33b42266ba6 https://www.encodeproject.org/files/ENCFF081YAN/@@download/ENCFF081YAN.bed.gz hg19 released borderline replicate concordance, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF881JMT bed narrowPeak peaks ENCSR000FAU ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF457SCP, ENCFF636ISQ, ENCFF998GMZ 4179661 ENCODE Processing Pipeline 2e7fccb0eaf1844ca652272840672c89 https://www.encodeproject.org/files/ENCFF881JMT/@@download/ENCFF881JMT.bed.gz hg19 released borderline replicate concordance, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF874TED bigBed narrowPeak peaks ENCSR000FAU ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 1 ENCFF873CLE 4948310 ENCODE Processing Pipeline f2b27842ee6c5a8a1e180089f0702b42 https://www.encodeproject.org/files/ENCFF874TED/@@download/ENCFF874TED.bigBed hg19 released borderline replicate concordance, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF544CBH bigBed narrowPeak peaks ENCSR000FAU ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 2 ENCFF081YAN 5376773 ENCODE Processing Pipeline e7e6f3f7b8289cfe87a336b260571d42 https://www.encodeproject.org/files/ENCFF544CBH/@@download/ENCFF544CBH.bigBed hg19 released borderline replicate concordance, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF677YBJ bigBed narrowPeak peaks ENCSR000FAU ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF881JMT 10169019 ENCODE Processing Pipeline 82d09b1413fa43008e949cc3f9567e6d https://www.encodeproject.org/files/ENCFF677YBJ/@@download/ENCFF677YBJ.bigBed hg19 released borderline replicate concordance, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF270FXG bed narrowPeak conservative idr thresholded peaks ENCSR000FAU ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF001TDO, ENCFF081YAN, ENCFF873CLE, ENCFF881JMT 15591 ENCODE Processing Pipeline a4bd1f2dc53d378b8dde7c5792cc9edf https://www.encodeproject.org/files/ENCFF270FXG/@@download/ENCFF270FXG.bed.gz hg19 released borderline replicate concordance, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF149CQZ bigBed narrowPeak conservative idr thresholded peaks ENCSR000FAU ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF270FXG 70060 ENCODE Processing Pipeline f452a86351c49eff8dfc482f852ad621 https://www.encodeproject.org/files/ENCFF149CQZ/@@download/ENCFF149CQZ.bigBed hg19 released borderline replicate concordance, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF254MPF bed narrowPeak optimal idr thresholded peaks ENCSR000FAU ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF001TDO, ENCFF081YAN, ENCFF873CLE, ENCFF881JMT 23891 ENCODE Processing Pipeline cc0458db40e7d908cb8702d577c43933 https://www.encodeproject.org/files/ENCFF254MPF/@@download/ENCFF254MPF.bed.gz hg19 released borderline replicate concordance, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF856SGO bigBed narrowPeak optimal idr thresholded peaks ENCSR000FAU ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF254MPF 97409 ENCODE Processing Pipeline da68836258a5fe21478b664fb2534437 https://www.encodeproject.org/files/ENCFF856SGO/@@download/ENCFF856SGO.bigBed hg19 released borderline replicate concordance, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF890CGC bigWig signal p-value ENCSR000FAU ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 1 ENCFF089XMI, ENCFF332CUX 304291970 ENCODE Processing Pipeline 6dc9cf0eaa4f03f9da9215275ec69543 https://www.encodeproject.org/files/ENCFF890CGC/@@download/ENCFF890CGC.bigWig GRCh38 released borderline replicate concordance, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF703MOP bigBed narrowPeak peaks ENCSR000FAU ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 1 ENCFF735OGT 4920659 ENCODE Processing Pipeline 7a63072b86aaca210c698fb5e84eb7af https://www.encodeproject.org/files/ENCFF703MOP/@@download/ENCFF703MOP.bigBed GRCh38 released borderline replicate concordance, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF620SGT bigBed narrowPeak peaks ENCSR000FAU ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 2 ENCFF998GXA 5369251 ENCODE Processing Pipeline 1582de2d83457e5f27bd66b7c3f5c178 https://www.encodeproject.org/files/ENCFF620SGT/@@download/ENCFF620SGT.bigBed GRCh38 released borderline replicate concordance, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF961QKD bigBed narrowPeak optimal idr thresholded peaks ENCSR000FAU ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF747ICD 79467 ENCODE Processing Pipeline b3c8a6f493e870c1c477c85def9df4a5 https://www.encodeproject.org/files/ENCFF961QKD/@@download/ENCFF961QKD.bigBed GRCh38 released borderline replicate concordance, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF168ZGI bigWig signal p-value ENCSR000FAU ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF089XMI, ENCFF263PLG, ENCFF332CUX 308180519 ENCODE Processing Pipeline 4d2bbb33058604e7ea4a2e3890cb7be9 https://www.encodeproject.org/files/ENCFF168ZGI/@@download/ENCFF168ZGI.bigWig GRCh38 released borderline replicate concordance, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF735OGT bed narrowPeak peaks ENCSR000FAU ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 1 ENCFF089XMI, ENCFF332CUX 2247031 ENCODE Processing Pipeline c0f9fc15b72888604bf828085945b6ad https://www.encodeproject.org/files/ENCFF735OGT/@@download/ENCFF735OGT.bed.gz GRCh38 released borderline replicate concordance, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF304OMG bed narrowPeak conservative idr thresholded peaks ENCSR000FAU ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF419RSJ, ENCFF735OGT, ENCFF857GVA, ENCFF998GXA 16181 ENCODE Processing Pipeline 2b42217089ac50aa4ad4783f27fee72d https://www.encodeproject.org/files/ENCFF304OMG/@@download/ENCFF304OMG.bed.gz GRCh38 released borderline replicate concordance, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF747ICD bed narrowPeak optimal idr thresholded peaks ENCSR000FAU ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF419RSJ, ENCFF735OGT, ENCFF857GVA, ENCFF998GXA 22148 ENCODE Processing Pipeline 726728ad07d94d62ed145038a4cf6a6e https://www.encodeproject.org/files/ENCFF747ICD/@@download/ENCFF747ICD.bed.gz GRCh38 released borderline replicate concordance, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF998GXA bed narrowPeak peaks ENCSR000FAU ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 2 ENCFF263PLG, ENCFF332CUX 2151827 ENCODE Processing Pipeline 88b844ffe29f3f29ab2fc5e1cd51d856 https://www.encodeproject.org/files/ENCFF998GXA/@@download/ENCFF998GXA.bed.gz GRCh38 released borderline replicate concordance, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF696EUW bigWig signal p-value ENCSR000FAU ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 2 ENCFF263PLG, ENCFF332CUX 236155640 ENCODE Processing Pipeline 5a9734186ec7f0de7e4fc4d77e84d3ab https://www.encodeproject.org/files/ENCFF696EUW/@@download/ENCFF696EUW.bigWig GRCh38 released borderline replicate concordance, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF384LRL bigWig fold change over control ENCSR000FAU ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 2 ENCFF263PLG, ENCFF332CUX 126069694 ENCODE Processing Pipeline 6bf73702addc3bcfa324d190db9dab2b https://www.encodeproject.org/files/ENCFF384LRL/@@download/ENCFF384LRL.bigWig GRCh38 released borderline replicate concordance, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF501LIV bigWig fold change over control ENCSR000FAU ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF089XMI, ENCFF263PLG, ENCFF332CUX 252873298 ENCODE Processing Pipeline 98c150f4128893cf9e9a31b7b1587449 https://www.encodeproject.org/files/ENCFF501LIV/@@download/ENCFF501LIV.bigWig GRCh38 released borderline replicate concordance, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF637GWO bigBed narrowPeak peaks ENCSR000FAU ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF857GVA 10178401 ENCODE Processing Pipeline d0785e1fbf6f42c198c0284f26ab0c67 https://www.encodeproject.org/files/ENCFF637GWO/@@download/ENCFF637GWO.bigBed GRCh38 released borderline replicate concordance, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF488VMG bigBed narrowPeak conservative idr thresholded peaks ENCSR000FAU ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF304OMG 70816 ENCODE Processing Pipeline bae5bd55ce41b6a949ba4c79b654b5c9 https://www.encodeproject.org/files/ENCFF488VMG/@@download/ENCFF488VMG.bigBed GRCh38 released borderline replicate concordance, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF184WZB bigWig fold change over control ENCSR000FAU ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 1 ENCFF089XMI, ENCFF332CUX 149621670 ENCODE Processing Pipeline 8836b72b27c95c881fdd15eee83aad7e https://www.encodeproject.org/files/ENCFF184WZB/@@download/ENCFF184WZB.bigWig GRCh38 released borderline replicate concordance, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF857GVA bed narrowPeak peaks ENCSR000FAU ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon alpha 6.0 hour STAT1-human ENCAB000ALF DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF089XMI, ENCFF263PLG, ENCFF332CUX 4176414 ENCODE Processing Pipeline 163c2640b9519deb60425b44c6f5c14a https://www.encodeproject.org/files/ENCFF857GVA/@@download/ENCFF857GVA.bed.gz GRCh38 released borderline replicate concordance, control low read depth biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF000YUR bam alignments ENCSR000EGR ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFYA-human ENCAB000AJC DNA see document see document False 2011-10-29 ENCODE 2 ENCFF000YVR 136787371 Michael Snyder, Stanford 602860489c943c9d1a0307792b025257 https://www.encodeproject.org/files/ENCFF000YUR/@@download/ENCFF000YUR.bam hg19 archived borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth ENCFF000YUS bam alignments ENCSR000EGR ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFYA-human ENCAB000AJC DNA see document see document False 2011-10-29 ENCODE 1 ENCFF000YUU, ENCFF000YUV 233837162 Michael Snyder, Stanford 9026ad5a9e831f159b0d5ca57e3545e3 https://www.encodeproject.org/files/ENCFF000YUS/@@download/ENCFF000YUS.bam hg19 archived borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth ENCFF000YUT bigBed narrowPeak peaks ENCSR000EGR ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFYA-human ENCAB000AJC DNA see document see document False 2011-10-29 ENCODE ENCFF001VNY 482149 Michael Snyder, Stanford 9fad02ed75b8088a032b608633732680 https://www.encodeproject.org/files/ENCFF000YUT/@@download/ENCFF000YUT.bigBed hg19 archived borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth ENCFF000YUU fastq reads ENCSR000EGR ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFYA-human ENCAB000AJC DNA see document see document False 2011-10-29 ENCODE 1 1 34 single-ended 133464797 Michael Snyder, Stanford 23df58803cd76374c1d3d59910f96e8b https://www.encodeproject.org/files/ENCFF000YUU/@@download/ENCFF000YUU.fastq.gz Illumina Genome Analyzer /files/ENCFF000YRN/ released borderline replicate concordance, mild to moderate bottlenecking, inconsistent control read length, moderate library complexity biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth ENCFF000YUW bigWig signal ENCSR000EGR ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFYA-human ENCAB000AJC DNA see document see document False 2011-10-29 ENCODE 120279750 Michael Snyder, Stanford 25d59cf9c08f567235cf89b6c5c72aeb https://www.encodeproject.org/files/ENCFF000YUW/@@download/ENCFF000YUW.bigWig hg19 archived borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample, missing derived_from insufficient read length, insufficient read depth extremely low read depth ENCFF000YVR fastq reads ENCSR000EGR ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFYA-human ENCAB000AJC DNA see document see document False 2011-10-29 ENCODE 2 1 34 single-ended 615469667 Michael Snyder, Stanford 9b85ad06bf782b60cae46802bc3610d8 https://www.encodeproject.org/files/ENCFF000YVR/@@download/ENCFF000YVR.fastq.gz Illumina Genome Analyzer /files/ENCFF000YRC/ released borderline replicate concordance, mild to moderate bottlenecking, inconsistent control read length, moderate library complexity biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth ENCFF001VNY bed narrowPeak peaks ENCSR000EGR ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFYA-human ENCAB000AJC DNA see document see document False 2011-10-29 ENCODE 167203 Michael Snyder, Stanford 8f67ba8132ba74601046c928a46fac93 https://www.encodeproject.org/files/ENCFF001VNY/@@download/ENCFF001VNY.bed.gz hg19 archived borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample, missing derived_from insufficient read length, insufficient read depth extremely low read depth ENCFF002CXI bed narrowPeak optimal idr thresholded peaks ENCSR000EGR ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFYA-human ENCAB000AJC DNA see document see document False 2011-10-29 ENCODE 97329 ENCODE Consortium Analysis Working Group 59e4f965b7bd0a75446915be7160aa9b https://www.encodeproject.org/files/ENCFF002CXI/@@download/ENCFF002CXI.bed.gz hg19 archived borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample, missing derived_from insufficient read length, insufficient read depth extremely low read depth ENCFF000YUV fastq reads ENCSR000EGR ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFYA-human ENCAB000AJC DNA see document see document False 2011-10-29 ENCODE 1 1 34 single-ended 544193201 Michael Snyder, Stanford 58c1ff3651e7b6b26924f6cd209d2aa0 https://www.encodeproject.org/files/ENCFF000YUV/@@download/ENCFF000YUV.fastq.gz Illumina Genome Analyzer /files/ENCFF000YRN/ released borderline replicate concordance, mild to moderate bottlenecking, inconsistent control read length, moderate library complexity biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth ENCFF428UEA bigBed narrowPeak optimal idr thresholded peaks ENCSR000EGR ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFYA-human ENCAB000AJC DNA see document see document False 2011-10-29 ENCODE ENCFF002CXI 254116 ENCODE Consortium 9e4b8467eece2a756e8ddd11a0f7e736 https://www.encodeproject.org/files/ENCFF428UEA/@@download/ENCFF428UEA.bigBed hg19 archived borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth ENCFF287DIZ bam unfiltered alignments ENCSR000EGR ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFYA-human ENCAB000AJC DNA see document see document False 2011-10-29 ENCODE 2 27 ENCFF000YVR, ENCFF807MUK 639471741 ENCODE Processing Pipeline 9615446e92924ebe1bf5e186b36613af https://www.encodeproject.org/files/ENCFF287DIZ/@@download/ENCFF287DIZ.bam hg19 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth ENCFF485LHB bam unfiltered alignments ENCSR000EGR ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFYA-human ENCAB000AJC DNA see document see document False 2011-10-29 ENCODE 1 27 ENCFF000YUU, ENCFF000YUV, ENCFF643CGH 711884828 ENCODE Processing Pipeline 6cb4a9d68fb5e0b6378c56e97ab41db4 https://www.encodeproject.org/files/ENCFF485LHB/@@download/ENCFF485LHB.bam GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth ENCFF818QIJ bam alignments ENCSR000EGR ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFYA-human ENCAB000AJC DNA see document see document False 2011-10-29 ENCODE 1 27 ENCFF000YUU, ENCFF000YUV, ENCFF643CGH 297526566 ENCODE Processing Pipeline 49ba6cde7166132e31d8fd74073b8be4 https://www.encodeproject.org/files/ENCFF818QIJ/@@download/ENCFF818QIJ.bam GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth ENCFF896HUN bam alignments ENCSR000EGR ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFYA-human ENCAB000AJC DNA see document see document False 2011-10-29 ENCODE 2 27 ENCFF000YVR, ENCFF807MUK 170623031 ENCODE Processing Pipeline ed354a7be6ff0abc694ae26deac3c549 https://www.encodeproject.org/files/ENCFF896HUN/@@download/ENCFF896HUN.bam hg19 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth ENCFF332TEB bam unfiltered alignments ENCSR000EGR ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFYA-human ENCAB000AJC DNA see document see document False 2011-10-29 ENCODE 2 27 ENCFF000YVR, ENCFF643CGH 641082278 ENCODE Processing Pipeline 17e49a95a60fd19be9e3b4a5fac4c2ec https://www.encodeproject.org/files/ENCFF332TEB/@@download/ENCFF332TEB.bam GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth ENCFF363BPK bam alignments ENCSR000EGR ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFYA-human ENCAB000AJC DNA see document see document False 2011-10-29 ENCODE 2 27 ENCFF000YVR, ENCFF643CGH 170355286 ENCODE Processing Pipeline b6e984c9b9990a101a4f1c27082f273f https://www.encodeproject.org/files/ENCFF363BPK/@@download/ENCFF363BPK.bam GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth ENCFF354VWW bam unfiltered alignments ENCSR000EGR ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFYA-human ENCAB000AJC DNA see document see document False 2011-10-29 ENCODE 1 27 ENCFF000YUU, ENCFF000YUV, ENCFF807MUK 710468458 ENCODE Processing Pipeline c3af1d9a07623cfbbfc1dab72879c26a https://www.encodeproject.org/files/ENCFF354VWW/@@download/ENCFF354VWW.bam hg19 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth ENCFF428ISY bam alignments ENCSR000EGR ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFYA-human ENCAB000AJC DNA see document see document False 2011-10-29 ENCODE 1 27 ENCFF000YUU, ENCFF000YUV, ENCFF807MUK 297859183 ENCODE Processing Pipeline 9777eab0f408d1c9d81e9c7277058f05 https://www.encodeproject.org/files/ENCFF428ISY/@@download/ENCFF428ISY.bam hg19 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth ENCFF818IKR bigWig fold change over control ENCSR000EGR ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFYA-human ENCAB000AJC DNA see document see document False 2011-10-29 ENCODE 1 ENCFF408YZH, ENCFF428ISY, ENCFF679XFJ 183091244 ENCODE Processing Pipeline d8e8a51fccd0f2dfc0cb956c4c758a98 https://www.encodeproject.org/files/ENCFF818IKR/@@download/ENCFF818IKR.bigWig hg19 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth ENCFF003WYE bed narrowPeak peaks ENCSR000EGR ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFYA-human ENCAB000AJC DNA see document see document False 2011-10-29 ENCODE 2 ENCFF408YZH, ENCFF679XFJ, ENCFF896HUN 1121347 ENCODE Processing Pipeline 0075b41ce937ac2948c49cd47fa765f0 https://www.encodeproject.org/files/ENCFF003WYE/@@download/ENCFF003WYE.bed.gz hg19 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth ENCFF690KLI bed narrowPeak peaks ENCSR000EGR ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFYA-human ENCAB000AJC DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF408YZH, ENCFF428ISY, ENCFF679XFJ, ENCFF896HUN 4403531 ENCODE Processing Pipeline cf8271a0bae3c1d1059e3d7faa8121bc https://www.encodeproject.org/files/ENCFF690KLI/@@download/ENCFF690KLI.bed.gz hg19 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth ENCFF826SGQ bed narrowPeak conservative idr thresholded peaks ENCSR000EGR ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFYA-human ENCAB000AJC DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF001TDO, ENCFF003WYE, ENCFF690KLI, ENCFF711NWL 64301 ENCODE Processing Pipeline 13bb9ef075b7cb9d92fcfc2e4c580ea9 https://www.encodeproject.org/files/ENCFF826SGQ/@@download/ENCFF826SGQ.bed.gz hg19 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth ENCFF310PTO bigWig signal p-value ENCSR000EGR ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFYA-human ENCAB000AJC DNA see document see document False 2011-10-29 ENCODE 2 ENCFF408YZH, ENCFF679XFJ, ENCFF896HUN 407514177 ENCODE Processing Pipeline 075b3b10e9f655d6a719818d8a658c5e https://www.encodeproject.org/files/ENCFF310PTO/@@download/ENCFF310PTO.bigWig hg19 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth ENCFF282UAG bigWig signal p-value ENCSR000EGR ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFYA-human ENCAB000AJC DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF408YZH, ENCFF428ISY, ENCFF679XFJ, ENCFF896HUN 409461517 ENCODE Processing Pipeline 749c28c3d30d9fa9a291962fc85ade9d https://www.encodeproject.org/files/ENCFF282UAG/@@download/ENCFF282UAG.bigWig hg19 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth ENCFF512DUP bigWig fold change over control ENCSR000EGR ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFYA-human ENCAB000AJC DNA see document see document False 2011-10-29 ENCODE 2 ENCFF408YZH, ENCFF679XFJ, ENCFF896HUN 105195076 ENCODE Processing Pipeline c983787a67a10d7e3a343fd9dd3c1d2c https://www.encodeproject.org/files/ENCFF512DUP/@@download/ENCFF512DUP.bigWig hg19 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth ENCFF802NVY bigWig fold change over control ENCSR000EGR ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFYA-human ENCAB000AJC DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF408YZH, ENCFF428ISY, ENCFF679XFJ, ENCFF896HUN 263331557 ENCODE Processing Pipeline f926d61cd253479621cfb1934342584e https://www.encodeproject.org/files/ENCFF802NVY/@@download/ENCFF802NVY.bigWig hg19 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth ENCFF343BYP bigBed narrowPeak peaks ENCSR000EGR ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFYA-human ENCAB000AJC DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF690KLI 10563156 ENCODE Processing Pipeline 0857af6deee0420bc4eb8e98e2b54d3b https://www.encodeproject.org/files/ENCFF343BYP/@@download/ENCFF343BYP.bigBed hg19 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth ENCFF676NIW bigBed narrowPeak optimal idr thresholded peaks ENCSR000EGR ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFYA-human ENCAB000AJC DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF012VES 186579 ENCODE Processing Pipeline 9fb123bc901a725b0279df6e79faf626 https://www.encodeproject.org/files/ENCFF676NIW/@@download/ENCFF676NIW.bigBed hg19 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth ENCFF931RFL bigWig signal p-value ENCSR000EGR ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFYA-human ENCAB000AJC DNA see document see document False 2011-10-29 ENCODE 1 ENCFF408YZH, ENCFF428ISY, ENCFF679XFJ 376482078 ENCODE Processing Pipeline 814ec9359c06544095d52b5656188160 https://www.encodeproject.org/files/ENCFF931RFL/@@download/ENCFF931RFL.bigWig hg19 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth ENCFF711NWL bed narrowPeak peaks ENCSR000EGR ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFYA-human ENCAB000AJC DNA see document see document False 2011-10-29 ENCODE 1 ENCFF408YZH, ENCFF428ISY, ENCFF679XFJ 2689320 ENCODE Processing Pipeline 4c85eb9984b66a7cc5fcda6d28d945d0 https://www.encodeproject.org/files/ENCFF711NWL/@@download/ENCFF711NWL.bed.gz hg19 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth ENCFF905WNU bigBed narrowPeak peaks ENCSR000EGR ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFYA-human ENCAB000AJC DNA see document see document False 2011-10-29 ENCODE 2 ENCFF003WYE 2554775 ENCODE Processing Pipeline ecd754991b0f2ddc2ad17ee561df22f8 https://www.encodeproject.org/files/ENCFF905WNU/@@download/ENCFF905WNU.bigBed hg19 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth ENCFF157SWC bigBed narrowPeak peaks ENCSR000EGR ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFYA-human ENCAB000AJC DNA see document see document False 2011-10-29 ENCODE 1 ENCFF711NWL 6681687 ENCODE Processing Pipeline f806f5832bcd1a8fdcc7991b9769aaa9 https://www.encodeproject.org/files/ENCFF157SWC/@@download/ENCFF157SWC.bigBed hg19 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth ENCFF746IDJ bigBed narrowPeak conservative idr thresholded peaks ENCSR000EGR ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFYA-human ENCAB000AJC DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF826SGQ 166722 ENCODE Processing Pipeline 9a57764b81416c4dc855d507ed2a50c3 https://www.encodeproject.org/files/ENCFF746IDJ/@@download/ENCFF746IDJ.bigBed hg19 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth ENCFF012VES bed narrowPeak optimal idr thresholded peaks ENCSR000EGR ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFYA-human ENCAB000AJC DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF001TDO, ENCFF003WYE, ENCFF690KLI, ENCFF711NWL 77635 ENCODE Processing Pipeline ead81452d9d50afa34b4539574d408f5 https://www.encodeproject.org/files/ENCFF012VES/@@download/ENCFF012VES.bed.gz hg19 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth ENCFF557JCP bigWig signal p-value ENCSR000EGR ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFYA-human ENCAB000AJC DNA see document see document False 2011-10-29 ENCODE 1 ENCFF123YHB, ENCFF332BFE, ENCFF818QIJ 381285928 ENCODE Processing Pipeline 99eec4dd8ab66b405eb1bd6aa80ad16d https://www.encodeproject.org/files/ENCFF557JCP/@@download/ENCFF557JCP.bigWig GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth ENCFF558PKR bigWig fold change over control ENCSR000EGR ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFYA-human ENCAB000AJC DNA see document see document False 2011-10-29 ENCODE 1 ENCFF123YHB, ENCFF332BFE, ENCFF818QIJ 181978817 ENCODE Processing Pipeline d66eb94e2e6f76d7d92ed5ccbe0a8348 https://www.encodeproject.org/files/ENCFF558PKR/@@download/ENCFF558PKR.bigWig GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth ENCFF910MGU bed narrowPeak peaks ENCSR000EGR ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFYA-human ENCAB000AJC DNA see document see document False 2011-10-29 ENCODE 2 ENCFF123YHB, ENCFF332BFE, ENCFF363BPK 1116964 ENCODE Processing Pipeline b497986ca0dc4a4a60b26727e5906dd2 https://www.encodeproject.org/files/ENCFF910MGU/@@download/ENCFF910MGU.bed.gz GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth ENCFF920JAQ bed narrowPeak peaks ENCSR000EGR ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFYA-human ENCAB000AJC DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF123YHB, ENCFF332BFE, ENCFF363BPK, ENCFF818QIJ 4401838 ENCODE Processing Pipeline 71d8f27201b54f61b47e1d71c0daeb04 https://www.encodeproject.org/files/ENCFF920JAQ/@@download/ENCFF920JAQ.bed.gz GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth ENCFF295THQ bed narrowPeak peaks ENCSR000EGR ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFYA-human ENCAB000AJC DNA see document see document False 2011-10-29 ENCODE 1 ENCFF123YHB, ENCFF332BFE, ENCFF818QIJ 2681698 ENCODE Processing Pipeline 87cfe6d88c47ff80feae009453b182b1 https://www.encodeproject.org/files/ENCFF295THQ/@@download/ENCFF295THQ.bed.gz GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth ENCFF811PLX bigBed narrowPeak peaks ENCSR000EGR ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFYA-human ENCAB000AJC DNA see document see document False 2011-10-29 ENCODE 2 ENCFF910MGU 2549081 ENCODE Processing Pipeline e6c7289fb0dbc9042cd149bc38a643f2 https://www.encodeproject.org/files/ENCFF811PLX/@@download/ENCFF811PLX.bigBed GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth ENCFF599MNJ bigWig signal p-value ENCSR000EGR ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFYA-human ENCAB000AJC DNA see document see document False 2011-10-29 ENCODE 2 ENCFF123YHB, ENCFF332BFE, ENCFF363BPK 396566833 ENCODE Processing Pipeline 8141e5e18b2c104322296053456ba1ca https://www.encodeproject.org/files/ENCFF599MNJ/@@download/ENCFF599MNJ.bigWig GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth ENCFF483EHO bigWig fold change over control ENCSR000EGR ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFYA-human ENCAB000AJC DNA see document see document False 2011-10-29 ENCODE 2 ENCFF123YHB, ENCFF332BFE, ENCFF363BPK 102514586 ENCODE Processing Pipeline 28f9a682ed44b98e4bc3e3048d5c57fa https://www.encodeproject.org/files/ENCFF483EHO/@@download/ENCFF483EHO.bigWig GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth ENCFF242HPZ bigWig fold change over control ENCSR000EGR ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFYA-human ENCAB000AJC DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF123YHB, ENCFF332BFE, ENCFF363BPK, ENCFF818QIJ 262742731 ENCODE Processing Pipeline 7191746b1a309d8d219e9780c61039b4 https://www.encodeproject.org/files/ENCFF242HPZ/@@download/ENCFF242HPZ.bigWig GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth ENCFF432BPK bigBed narrowPeak peaks ENCSR000EGR ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFYA-human ENCAB000AJC DNA see document see document False 2011-10-29 ENCODE 1 ENCFF295THQ 6668019 ENCODE Processing Pipeline ec53bc346ee0de6e846887948c18e472 https://www.encodeproject.org/files/ENCFF432BPK/@@download/ENCFF432BPK.bigBed GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth ENCFF124MXH bed narrowPeak conservative idr thresholded peaks ENCSR000EGR ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFYA-human ENCAB000AJC DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF295THQ, ENCFF419RSJ, ENCFF910MGU, ENCFF920JAQ 64184 ENCODE Processing Pipeline c324ff9c00e477a5920fae9ee6f4b9f4 https://www.encodeproject.org/files/ENCFF124MXH/@@download/ENCFF124MXH.bed.gz GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth ENCFF431SXP bigBed narrowPeak conservative idr thresholded peaks ENCSR000EGR ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFYA-human ENCAB000AJC DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF124MXH 166693 ENCODE Processing Pipeline 2849edb52252b822516913b57d926ec6 https://www.encodeproject.org/files/ENCFF431SXP/@@download/ENCFF431SXP.bigBed GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth ENCFF302CPE bed narrowPeak optimal idr thresholded peaks ENCSR000EGR ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFYA-human ENCAB000AJC DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF295THQ, ENCFF419RSJ, ENCFF910MGU, ENCFF920JAQ 79562 ENCODE Processing Pipeline 7edd9048d520370449e8277c99d9e666 https://www.encodeproject.org/files/ENCFF302CPE/@@download/ENCFF302CPE.bed.gz GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth ENCFF833QIQ bigBed narrowPeak peaks ENCSR000EGR ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFYA-human ENCAB000AJC DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF920JAQ 10569418 ENCODE Processing Pipeline 1d54069c541299bcc775f90482842564 https://www.encodeproject.org/files/ENCFF833QIQ/@@download/ENCFF833QIQ.bigBed GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth ENCFF180VKB bigWig signal p-value ENCSR000EGR ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFYA-human ENCAB000AJC DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF123YHB, ENCFF332BFE, ENCFF363BPK, ENCFF818QIJ 437258793 ENCODE Processing Pipeline 9a03539ecd14099baaaf11c3ba66c619 https://www.encodeproject.org/files/ENCFF180VKB/@@download/ENCFF180VKB.bigWig GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth ENCFF916AUG bigBed narrowPeak optimal idr thresholded peaks ENCSR000EGR ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFYA-human ENCAB000AJC DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF302CPE 189494 ENCODE Processing Pipeline 7af22ed31d1e495ba6f95267cf21e904 https://www.encodeproject.org/files/ENCFF916AUG/@@download/ENCFF916AUG.bigBed GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read length, insufficient read depth extremely low read depth ENCFF000BUY bam alignments ENCSR000ATU ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX2-human ENCAB000AEV DNA see document see document False 2012-08-06 ENCODE 1 1 794128711 Bradley Bernstein, Broad 3939dddc90326bc87cf9b6b3e122c4c8 https://www.encodeproject.org/files/ENCFF000BUY/@@download/ENCFF000BUY.bam hg19 archived inconsistent platforms, mild to moderate bottlenecking, low read length missing derived_from, missing raw data in replicate poor library complexity, insufficient read depth, severe bottlenecking ENCFF000BUZ bigBed broadPeak peaks ENCSR000ATU ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX2-human ENCAB000AEV DNA see document see document False 2012-08-06 ENCODE ENCFF001SYV 798362 Bradley Bernstein, Broad 1e8a012589a8c65975f229fb2f84df3f https://www.encodeproject.org/files/ENCFF000BUZ/@@download/ENCFF000BUZ.bigBed hg19 archived inconsistent platforms, mild to moderate bottlenecking, low read length missing raw data in replicate poor library complexity, insufficient read depth, severe bottlenecking ENCFF000BVA bigWig signal ENCSR000ATU ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX2-human ENCAB000AEV DNA see document see document False 2012-08-06 ENCODE 177172647 Bradley Bernstein, Broad 74028ccbe01e5a95354b159cdee0e46c https://www.encodeproject.org/files/ENCFF000BVA/@@download/ENCFF000BVA.bigWig hg19 archived inconsistent platforms, mild to moderate bottlenecking, low read length missing derived_from, missing raw data in replicate poor library complexity, insufficient read depth, severe bottlenecking ENCFF000BVN fastq reads ENCSR000ATU ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX2-human ENCAB000AEV DNA see document see document False 2012-08-06 ENCODE 1 1 36 single-ended 836956046 Bradley Bernstein, Broad 069cebb4651445e970699d4b4343604e https://www.encodeproject.org/files/ENCFF000BVN/@@download/ENCFF000BVN.fastq.gz Illumina HiSeq 2000 /files/ENCFF000BWK/ released inconsistent platforms, mild to moderate bottlenecking, low read length missing raw data in replicate poor library complexity, insufficient read depth, severe bottlenecking ENCFF001SYV bed broadPeak peaks ENCSR000ATU ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX2-human ENCAB000AEV DNA see document see document False 2012-08-06 ENCODE 423186 Bradley Bernstein, Broad 2c8ea63b560779f0febfc27b1004de8b https://www.encodeproject.org/files/ENCFF001SYV/@@download/ENCFF001SYV.bed.gz hg19 archived inconsistent platforms, mild to moderate bottlenecking, low read length missing derived_from, missing raw data in replicate poor library complexity, insufficient read depth, severe bottlenecking ENCFF464EDM fastq reads ENCSR000ATU ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX2-human ENCAB000AEV DNA see document see document False 2012-08-06 ENCODE 2 1 25 paired-ended 1 ENCFF403RUO 1754769188 Bradley Bernstein, Broad 72ba2d6ebf0390d7e755f8e46cbb0356 https://www.encodeproject.org/files/ENCFF464EDM/@@download/ENCFF464EDM.fastq.gz Illumina HiSeq 2500 archived inconsistent platforms, mild to moderate bottlenecking, low read length missing raw data in replicate severe bottlenecking, poor library complexity, insufficient read depth, missing controlled_by ENCFF403RUO fastq reads ENCSR000ATU ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX2-human ENCAB000AEV DNA see document see document False 2012-08-06 ENCODE 2 1 25 paired-ended 2 ENCFF464EDM 1770732604 Bradley Bernstein, Broad a5532fd402933fc74d108a6115237342 https://www.encodeproject.org/files/ENCFF403RUO/@@download/ENCFF403RUO.fastq.gz Illumina HiSeq 2500 archived inconsistent platforms, mild to moderate bottlenecking, low read length missing raw data in replicate severe bottlenecking, poor library complexity, insufficient read depth, missing controlled_by ENCFF741LEE bam alignments ENCSR000ATU ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX2-human ENCAB000AEV DNA see document see document False 2012-08-06 ENCODE 1 36 ENCFF000BVN, ENCFF643CGH 314703900 ENCODE Processing Pipeline 1c3cddaef75b782dd549c5b2b90ebe2e https://www.encodeproject.org/files/ENCFF741LEE/@@download/ENCFF741LEE.bam GRCh38 released inconsistent platforms, mild to moderate bottlenecking, low read length missing raw data in replicate poor library complexity, insufficient read depth, severe bottlenecking ENCFF657GAK bam unfiltered alignments ENCSR000ATU ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX2-human ENCAB000AEV DNA see document see document False 2012-08-06 ENCODE 1 36 ENCFF000BVN, ENCFF643CGH 1017856343 ENCODE Processing Pipeline b0e95060e564fa75273f6888cc170ab3 https://www.encodeproject.org/files/ENCFF657GAK/@@download/ENCFF657GAK.bam GRCh38 released inconsistent platforms, mild to moderate bottlenecking, low read length missing raw data in replicate poor library complexity, insufficient read depth, severe bottlenecking ENCFF346CUZ bam alignments ENCSR000ATU ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX2-human ENCAB000AEV DNA see document see document False 2012-08-06 ENCODE 1 36 ENCFF000BVN, ENCFF807MUK 314976399 ENCODE Processing Pipeline 586a880fbbc1714e97c8908546153166 https://www.encodeproject.org/files/ENCFF346CUZ/@@download/ENCFF346CUZ.bam hg19 released inconsistent platforms, mild to moderate bottlenecking, low read length missing raw data in replicate poor library complexity, insufficient read depth, severe bottlenecking ENCFF193DAI bam unfiltered alignments ENCSR000ATU ChIP-seq EFO:0002067 K562 cell line Homo sapiens CBX2-human ENCAB000AEV DNA see document see document False 2012-08-06 ENCODE 1 36 ENCFF000BVN, ENCFF807MUK 1010917692 ENCODE Processing Pipeline 64f0b49c1df3a5b94d747697f80ae7c7 https://www.encodeproject.org/files/ENCFF193DAI/@@download/ENCFF193DAI.bam hg19 released inconsistent platforms, mild to moderate bottlenecking, low read length missing raw data in replicate poor library complexity, insufficient read depth, severe bottlenecking ENCFF000YHZ fastq reads ENCSR000FAI ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOS-human ENCAB000AEQ DNA see document see document False 2011-10-29 ENCODE 2 1 27 single-ended 160334002 Sherman Weissman, Yale 780a8f246a9e8a9cf7433e38da4dda3a https://www.encodeproject.org/files/ENCFF000YHZ/@@download/ENCFF000YHZ.fastq.gz Illumina Genome Analyzer released biological replicates with identical biosample, duplicate lane review insufficient read length, missing controlled_by ENCFF000YIA fastq reads ENCSR000FAI ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOS-human ENCAB000AEQ DNA see document see document False 2011-10-29 ENCODE 3 1 27 single-ended 171575840 Sherman Weissman, Yale dd27739cd8f4ac1f1cf8362f82684c1b https://www.encodeproject.org/files/ENCFF000YIA/@@download/ENCFF000YIA.fastq.gz Illumina Genome Analyzer released biological replicates with identical biosample, duplicate lane review insufficient read length, missing controlled_by ENCFF000YIB fastq reads ENCSR000FAI ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOS-human ENCAB000AEQ DNA see document see document False 2011-10-29 ENCODE 1 1 27 single-ended 176086067 Sherman Weissman, Yale 622a5bb15af0ec9f1bc03c69f7eb556f https://www.encodeproject.org/files/ENCFF000YIB/@@download/ENCFF000YIB.fastq.gz Illumina Genome Analyzer released biological replicates with identical biosample, duplicate lane review insufficient read length, missing controlled_by ENCFF000YIE bigBed narrowPeak peaks ENCSR000FAI ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOS-human ENCAB000AEQ DNA see document see document False 2011-10-29 ENCODE ENCFF001VMH 261377 Sherman Weissman, Yale e092e7c13064224c9140839b4a60325d https://www.encodeproject.org/files/ENCFF000YIE/@@download/ENCFF000YIE.bigBed hg19 released biological replicates with identical biosample, duplicate lane review insufficient read length ENCFF000YIF bigWig signal ENCSR000FAI ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOS-human ENCAB000AEQ DNA see document see document False 2011-10-29 ENCODE 291325173 Sherman Weissman, Yale 220fe9fb747ea677fde2ccb505fabbe0 https://www.encodeproject.org/files/ENCFF000YIF/@@download/ENCFF000YIF.bigWig hg19 released biological replicates with identical biosample, duplicate lane review, missing derived_from insufficient read length ENCFF000YIG bam alignments ENCSR000FAI ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOS-human ENCAB000AEQ DNA see document see document False 2011-10-29 ENCODE 2 ENCFF000YHZ 194498098 Sherman Weissman, Yale 011d7d44c028f404425b00568fa7769f https://www.encodeproject.org/files/ENCFF000YIG/@@download/ENCFF000YIG.bam hg19 released biological replicates with identical biosample, duplicate lane review insufficient read length ENCFF000YIH bam alignments ENCSR000FAI ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOS-human ENCAB000AEQ DNA see document see document False 2011-10-29 ENCODE 1 ENCFF000YIB 216573649 Sherman Weissman, Yale cf7599a39040c55b933a5e5381693a4a https://www.encodeproject.org/files/ENCFF000YIH/@@download/ENCFF000YIH.bam hg19 released biological replicates with identical biosample, duplicate lane review insufficient read length ENCFF000YII bam alignments ENCSR000FAI ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOS-human ENCAB000AEQ DNA see document see document False 2011-10-29 ENCODE 3 ENCFF000YIA 216606543 Sherman Weissman, Yale b104cbcedb5c6bcad77e98600467e557 https://www.encodeproject.org/files/ENCFF000YII/@@download/ENCFF000YII.bam hg19 released biological replicates with identical biosample, duplicate lane review insufficient read length ENCFF001VMH bed narrowPeak peaks ENCSR000FAI ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOS-human ENCAB000AEQ DNA see document see document False 2011-10-29 ENCODE 103402 Sherman Weissman, Yale b271e724564862010afa14bee0b59a10 https://www.encodeproject.org/files/ENCFF001VMH/@@download/ENCFF001VMH.bed.gz hg19 released biological replicates with identical biosample, duplicate lane review, missing derived_from insufficient read length ENCFF002CVW bed narrowPeak optimal idr thresholded peaks ENCSR000FAI ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOS-human ENCAB000AEQ DNA see document see document False 2011-10-29 ENCODE 153814 ENCODE Consortium Analysis Working Group 6dcfdb373210f92a6f160dc9869db949 https://www.encodeproject.org/files/ENCFF002CVW/@@download/ENCFF002CVW.bed.gz hg19 released biological replicates with identical biosample, duplicate lane review, missing derived_from insufficient read length ENCFF238YBL bigBed narrowPeak optimal idr thresholded peaks ENCSR000FAI ChIP-seq EFO:0002067 K562 cell line Homo sapiens FOS-human ENCAB000AEQ DNA see document see document False 2011-10-29 ENCODE ENCFF002CVW 364901 ENCODE Consortium 0cffa77e591948ee50c9a6d4efb61c45 https://www.encodeproject.org/files/ENCFF238YBL/@@download/ENCFF238YBL.bigBed hg19 released biological replicates with identical biosample, duplicate lane review insufficient read length ENCFF000YFX bam alignments ENCSR000DOK ChIP-seq EFO:0002067 K562 cell line Homo sapiens BDP1-human ENCAB000AEI DNA see document see document False 2011-10-29 ENCODE 1 ENCFF000YGF 731339968 Kevin Struhl, HMS d49ce28e0bd1bfcd683d946548f6ffa3 https://www.encodeproject.org/files/ENCFF000YFX/@@download/ENCFF000YFX.bam hg19 released biological replicates with identical biosample insufficient read length ENCFF000YFY bam alignments ENCSR000DOK ChIP-seq EFO:0002067 K562 cell line Homo sapiens BDP1-human ENCAB000AEI DNA see document see document False 2011-10-29 ENCODE 2 ENCFF000YGH 805597756 Kevin Struhl, HMS 4a9ff97cf0c0c9af4c9b4944d28948fd https://www.encodeproject.org/files/ENCFF000YFY/@@download/ENCFF000YFY.bam hg19 released biological replicates with identical biosample insufficient read length ENCFF000YFZ bigBed narrowPeak peaks ENCSR000DOK ChIP-seq EFO:0002067 K562 cell line Homo sapiens BDP1-human ENCAB000AEI DNA see document see document False 2011-10-29 ENCODE ENCFF001VMA 101458 Kevin Struhl, HMS 04ecf5ed0a63ef1b882f716ef70058c4 https://www.encodeproject.org/files/ENCFF000YFZ/@@download/ENCFF000YFZ.bigBed hg19 released biological replicates with identical biosample insufficient read length ENCFF000YGA bigWig signal ENCSR000DOK ChIP-seq EFO:0002067 K562 cell line Homo sapiens BDP1-human ENCAB000AEI DNA see document see document False 2011-10-29 ENCODE 493792246 Kevin Struhl, HMS d5eca9316e3a7a79977525c21a2a80ac https://www.encodeproject.org/files/ENCFF000YGA/@@download/ENCFF000YGA.bigWig hg19 released biological replicates with identical biosample, missing derived_from insufficient read length ENCFF000YGB bam alignments ENCSR000DOK ChIP-seq EFO:0002067 K562 cell line Homo sapiens BDP1-human ENCAB000AEI DNA see document see document False 2011-10-29 ENCODE 3 ENCFF000YGI 783793273 Kevin Struhl, HMS f181d0b9cbddb4b386f11696bcbc5d0b https://www.encodeproject.org/files/ENCFF000YGB/@@download/ENCFF000YGB.bam hg19 released biological replicates with identical biosample insufficient read length ENCFF000YGF fastq reads ENCSR000DOK ChIP-seq EFO:0002067 K562 cell line Homo sapiens BDP1-human ENCAB000AEI DNA see document see document False 2011-10-29 ENCODE 1 1 27 single-ended 547362279 Kevin Struhl, HMS 5746bf3784e9071760dade1f9a682202 https://www.encodeproject.org/files/ENCFF000YGF/@@download/ENCFF000YGF.fastq.gz Illumina Genome Analyzer released biological replicates with identical biosample insufficient read length, missing controlled_by ENCFF000YGH fastq reads ENCSR000DOK ChIP-seq EFO:0002067 K562 cell line Homo sapiens BDP1-human ENCAB000AEI DNA see document see document False 2011-10-29 ENCODE 2 1 27 single-ended 607319145 Kevin Struhl, HMS 63175ee7a95f52a9cc7df9bf8848d18b https://www.encodeproject.org/files/ENCFF000YGH/@@download/ENCFF000YGH.fastq.gz Illumina Genome Analyzer released biological replicates with identical biosample insufficient read length, missing controlled_by ENCFF000YGI fastq reads ENCSR000DOK ChIP-seq EFO:0002067 K562 cell line Homo sapiens BDP1-human ENCAB000AEI DNA see document see document False 2011-10-29 ENCODE 3 1 27 single-ended 592352509 Kevin Struhl, HMS d7308abd509e221c07a513f52f66cb7c https://www.encodeproject.org/files/ENCFF000YGI/@@download/ENCFF000YGI.fastq.gz Illumina Genome Analyzer released biological replicates with identical biosample insufficient read length, missing controlled_by ENCFF001VMA bed narrowPeak peaks ENCSR000DOK ChIP-seq EFO:0002067 K562 cell line Homo sapiens BDP1-human ENCAB000AEI DNA see document see document False 2011-10-29 ENCODE 8976 Kevin Struhl, HMS 77ddebdfd55e26dbf3ad35aa4d74749f https://www.encodeproject.org/files/ENCFF001VMA/@@download/ENCFF001VMA.bed.gz hg19 released biological replicates with identical biosample, missing derived_from insufficient read length ENCFF002CVP bed narrowPeak optimal idr thresholded peaks ENCSR000DOK ChIP-seq EFO:0002067 K562 cell line Homo sapiens BDP1-human ENCAB000AEI DNA see document see document False 2011-10-29 ENCODE 14731 ENCODE Consortium Analysis Working Group b7736965c422593b231caef94ba62e82 https://www.encodeproject.org/files/ENCFF002CVP/@@download/ENCFF002CVP.bed.gz hg19 released biological replicates with identical biosample, missing derived_from insufficient read length ENCFF738LIL bigBed narrowPeak optimal idr thresholded peaks ENCSR000DOK ChIP-seq EFO:0002067 K562 cell line Homo sapiens BDP1-human ENCAB000AEI DNA see document see document False 2011-10-29 ENCODE ENCFF002CVP 112706 ENCODE Consortium b5d34aea3ddd94233ae1bee20fc0bc50 https://www.encodeproject.org/files/ENCFF738LIL/@@download/ENCFF738LIL.bigBed hg19 released biological replicates with identical biosample insufficient read length ENCFF000YOQ fastq reads ENCSR000DOB ChIP-seq EFO:0002067 K562 cell line Homo sapiens HMGN3-human ENCAB000AHN DNA see document see document False 2011-10-29 ENCODE 2 1 36 single-ended 947957409 Kevin Struhl, HMS 24018da97247bbfcb0e9de6653ed86a8 https://www.encodeproject.org/files/ENCFF000YOQ/@@download/ENCFF000YOQ.fastq.gz Illumina Genome Analyzer /files/ENCFF000YRC/ released mixed read lengths, inconsistent control read length, low read length biological replicates with identical biosample insufficient read length ENCFF000YOJ bam alignments ENCSR000DOB ChIP-seq EFO:0002067 K562 cell line Homo sapiens HMGN3-human ENCAB000AHN DNA see document see document False 2011-10-29 ENCODE 1 ENCFF000YOP 150930955 Kevin Struhl, HMS b1892cb5230a491fa6498272e823f9d2 https://www.encodeproject.org/files/ENCFF000YOJ/@@download/ENCFF000YOJ.bam hg19 released mixed read lengths, low read length biological replicates with identical biosample insufficient read length ENCFF000YOK bam alignments ENCSR000DOB ChIP-seq EFO:0002067 K562 cell line Homo sapiens HMGN3-human ENCAB000AHN DNA see document see document False 2011-10-29 ENCODE 2 ENCFF000YOQ 367422796 Kevin Struhl, HMS 5a3eaeb8574bd6f54e63a5bf1cfc9299 https://www.encodeproject.org/files/ENCFF000YOK/@@download/ENCFF000YOK.bam hg19 released mixed read lengths, low read length biological replicates with identical biosample insufficient read length ENCFF000YOL bigBed narrowPeak peaks ENCSR000DOB ChIP-seq EFO:0002067 K562 cell line Homo sapiens HMGN3-human ENCAB000AHN DNA see document see document False 2011-10-29 ENCODE ENCFF001VNI 1809908 Kevin Struhl, HMS c928d505bc3d8babde44696e0519020a https://www.encodeproject.org/files/ENCFF000YOL/@@download/ENCFF000YOL.bigBed hg19 released mixed read lengths, low read length biological replicates with identical biosample insufficient read length ENCFF000YON bigWig signal ENCSR000DOB ChIP-seq EFO:0002067 K562 cell line Homo sapiens HMGN3-human ENCAB000AHN DNA see document see document False 2011-10-29 ENCODE 337207166 Kevin Struhl, HMS 90f7d451b048a304c0fc140992ef6134 https://www.encodeproject.org/files/ENCFF000YON/@@download/ENCFF000YON.bigWig hg19 released mixed read lengths, low read length biological replicates with identical biosample, missing derived_from insufficient read length ENCFF000YOP fastq reads ENCSR000DOB ChIP-seq EFO:0002067 K562 cell line Homo sapiens HMGN3-human ENCAB000AHN DNA see document see document False 2011-10-29 ENCODE 1 1 27 single-ended 299376056 Kevin Struhl, HMS 842dcb8e4d8783a2b5aa1352f2aeb971 https://www.encodeproject.org/files/ENCFF000YOP/@@download/ENCFF000YOP.fastq.gz Illumina Genome Analyzer /files/ENCFF000YRN/ released mixed read lengths, low read length biological replicates with identical biosample insufficient read length ENCFF001VNI bed narrowPeak peaks ENCSR000DOB ChIP-seq EFO:0002067 K562 cell line Homo sapiens HMGN3-human ENCAB000AHN DNA see document see document False 2011-10-29 ENCODE 709237 Kevin Struhl, HMS fca4dfee5f42fcc3e629200d9523a39c https://www.encodeproject.org/files/ENCFF001VNI/@@download/ENCFF001VNI.bed.gz hg19 released mixed read lengths, low read length biological replicates with identical biosample, missing derived_from insufficient read length ENCFF002CWT bed narrowPeak optimal idr thresholded peaks ENCSR000DOB ChIP-seq EFO:0002067 K562 cell line Homo sapiens HMGN3-human ENCAB000AHN DNA see document see document False 2011-10-29 ENCODE 320736 ENCODE Consortium Analysis Working Group 9784935821cde1c75e773aba4c415e7d https://www.encodeproject.org/files/ENCFF002CWT/@@download/ENCFF002CWT.bed.gz hg19 released mixed read lengths, low read length biological replicates with identical biosample, missing derived_from insufficient read length ENCFF510MIH bigBed narrowPeak optimal idr thresholded peaks ENCSR000DOB ChIP-seq EFO:0002067 K562 cell line Homo sapiens HMGN3-human ENCAB000AHN DNA see document see document False 2011-10-29 ENCODE ENCFF002CWT 753606 ENCODE Consortium 316793c477b503f4193e386796557aaa https://www.encodeproject.org/files/ENCFF510MIH/@@download/ENCFF510MIH.bigBed hg19 released mixed read lengths, low read length biological replicates with identical biosample insufficient read length ENCFF000CAM bigBed broadPeak peaks ENCSR000ATZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens KAT2B-human ENCAB000AJV DNA see document see document False 2012-08-06 ENCODE ENCFF001SZW 483532 Bradley Bernstein, Broad 6ae417735059766b6052e693b70a20cd https://www.encodeproject.org/files/ENCFF000CAM/@@download/ENCFF000CAM.bigBed hg19 archived control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length ENCFF000CAN bam alignments ENCSR000ATZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens KAT2B-human ENCAB000AJV DNA see document see document False 2012-08-06 ENCODE 1 ENCFF000CAY 1214069729 Bradley Bernstein, Broad afb92bc972fe313e52a94addd92b7bc8 https://www.encodeproject.org/files/ENCFF000CAN/@@download/ENCFF000CAN.bam hg19 archived control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length ENCFF000CAO bigWig signal ENCSR000ATZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens KAT2B-human ENCAB000AJV DNA see document see document False 2012-08-06 ENCODE 284048629 Bradley Bernstein, Broad 13727febf5e5662603c3cd8528901699 https://www.encodeproject.org/files/ENCFF000CAO/@@download/ENCFF000CAO.bigWig hg19 archived control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length missing derived_from ENCFF000CAY fastq reads ENCSR000ATZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens KAT2B-human ENCAB000AJV DNA see document see document False 2012-08-06 ENCODE 1 1 36 single-ended 1393101507 Bradley Bernstein, Broad f11840c9166c7580f06365f097d93c2a https://www.encodeproject.org/files/ENCFF000CAY/@@download/ENCFF000CAY.fastq.gz Illumina HiSeq 2000 /files/ENCFF000BWK/ released control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length ENCFF001SZW bed broadPeak peaks ENCSR000ATZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens KAT2B-human ENCAB000AJV DNA see document see document False 2012-08-06 ENCODE 271621 Bradley Bernstein, Broad bad872a118472f6f2d6a471a53ca24a6 https://www.encodeproject.org/files/ENCFF001SZW/@@download/ENCFF001SZW.bed.gz hg19 archived control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length missing derived_from ENCFF786MVA bam unfiltered alignments ENCSR000ATZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens KAT2B-human ENCAB000AJV DNA see document see document False 2012-08-06 ENCODE 1 36 ENCFF000CAY, ENCFF807MUK 1674381976 ENCODE Processing Pipeline c14e87b52fb5ad2956c56d42e623a329 https://www.encodeproject.org/files/ENCFF786MVA/@@download/ENCFF786MVA.bam hg19 released control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length ENCFF645NAU bam alignments ENCSR000ATZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens KAT2B-human ENCAB000AJV DNA see document see document False 2012-08-06 ENCODE 1 36 ENCFF000CAY, ENCFF807MUK 616156307 ENCODE Processing Pipeline c817b09042e12a758fa1e983581628da https://www.encodeproject.org/files/ENCFF645NAU/@@download/ENCFF645NAU.bam hg19 released control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length ENCFF570SBS bam alignments ENCSR000ATZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens KAT2B-human ENCAB000AJV DNA see document see document False 2012-08-06 ENCODE 1 36 ENCFF000CAY, ENCFF643CGH 615697818 ENCODE Processing Pipeline 150808551513688af73a414c6c5ca00d https://www.encodeproject.org/files/ENCFF570SBS/@@download/ENCFF570SBS.bam GRCh38 released control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length ENCFF303ZPD bam unfiltered alignments ENCSR000ATZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens KAT2B-human ENCAB000AJV DNA see document see document False 2012-08-06 ENCODE 1 36 ENCFF000CAY, ENCFF643CGH 1683338488 ENCODE Processing Pipeline 82d19bea1b5752d05f0fc0058712f0d6 https://www.encodeproject.org/files/ENCFF303ZPD/@@download/ENCFF303ZPD.bam GRCh38 released control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length ENCFF237DHH bed narrowPeak peaks ENCSR000ATZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens KAT2B-human ENCAB000AJV DNA see document see document False 2012-08-06 ENCODE 1 ENCFF574XYY, ENCFF645NAU 4165936 ENCODE Processing Pipeline 6d3d34236cac327fb84020fdc4290f13 https://www.encodeproject.org/files/ENCFF237DHH/@@download/ENCFF237DHH.bed.gz hg19 released control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length ENCFF002UJF bigWig signal p-value ENCSR000ATZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens KAT2B-human ENCAB000AJV DNA see document see document False 2012-08-06 ENCODE 1 ENCFF574XYY, ENCFF645NAU 310540041 ENCODE Processing Pipeline 72c51336d392918d96f8990bd5554b53 https://www.encodeproject.org/files/ENCFF002UJF/@@download/ENCFF002UJF.bigWig hg19 released control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length ENCFF164NLF bigWig fold change over control ENCSR000ATZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens KAT2B-human ENCAB000AJV DNA see document see document False 2012-08-06 ENCODE 1 ENCFF574XYY, ENCFF645NAU 261967952 ENCODE Processing Pipeline 2eb5c15065df9551653c2d81cf1326a7 https://www.encodeproject.org/files/ENCFF164NLF/@@download/ENCFF164NLF.bigWig hg19 released control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length ENCFF153KKB bigBed narrowPeak peaks ENCSR000ATZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens KAT2B-human ENCAB000AJV DNA see document see document False 2012-08-06 ENCODE 1 ENCFF237DHH 10433388 ENCODE Processing Pipeline cdb3211e11a4a4df5ef547cdabf0f74b https://www.encodeproject.org/files/ENCFF153KKB/@@download/ENCFF153KKB.bigBed hg19 released control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length ENCFF185GBT bed narrowPeak pseudoreplicated idr thresholded peaks ENCSR000ATZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens KAT2B-human ENCAB000AJV DNA see document see document False 2012-08-06 ENCODE 1 ENCFF001TDO, ENCFF237DHH 13696 ENCODE Processing Pipeline ebc0369b852af0b1bf608185e289498d https://www.encodeproject.org/files/ENCFF185GBT/@@download/ENCFF185GBT.bed.gz hg19 released control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length ENCFF395UJA bigBed narrowPeak pseudoreplicated idr thresholded peaks ENCSR000ATZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens KAT2B-human ENCAB000AJV DNA see document see document False 2012-08-06 ENCODE 1 ENCFF185GBT 75057 ENCODE Processing Pipeline 9611abd7b8f47d7d3ba868427ed6e429 https://www.encodeproject.org/files/ENCFF395UJA/@@download/ENCFF395UJA.bigBed hg19 released control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length ENCFF934JGA bigWig signal p-value ENCSR000ATZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens KAT2B-human ENCAB000AJV DNA see document see document False 2012-08-06 ENCODE 1 ENCFF392XRJ, ENCFF570SBS 284155964 ENCODE Processing Pipeline 82ac7e76240f3612dfc8e0b01392d820 https://www.encodeproject.org/files/ENCFF934JGA/@@download/ENCFF934JGA.bigWig GRCh38 released control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length ENCFF827SHX bed narrowPeak peaks ENCSR000ATZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens KAT2B-human ENCAB000AJV DNA see document see document False 2012-08-06 ENCODE 1 ENCFF392XRJ, ENCFF570SBS 4060065 ENCODE Processing Pipeline f4e84522bcad67c9fff48c3f06a69e1c https://www.encodeproject.org/files/ENCFF827SHX/@@download/ENCFF827SHX.bed.gz GRCh38 released control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length ENCFF133TDD bigBed narrowPeak pseudoreplicated idr thresholded peaks ENCSR000ATZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens KAT2B-human ENCAB000AJV DNA see document see document False 2012-08-06 ENCODE 1 ENCFF556XQQ 72801 ENCODE Processing Pipeline 8f031cb0e0f3176a006a1660e39cfb6e https://www.encodeproject.org/files/ENCFF133TDD/@@download/ENCFF133TDD.bigBed GRCh38 released control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length ENCFF517EVJ bigBed narrowPeak peaks ENCSR000ATZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens KAT2B-human ENCAB000AJV DNA see document see document False 2012-08-06 ENCODE 1 ENCFF827SHX 10247416 ENCODE Processing Pipeline 7aff3ccde9974178fc8e6cd2b8d24e85 https://www.encodeproject.org/files/ENCFF517EVJ/@@download/ENCFF517EVJ.bigBed GRCh38 released control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length ENCFF556XQQ bed narrowPeak pseudoreplicated idr thresholded peaks ENCSR000ATZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens KAT2B-human ENCAB000AJV DNA see document see document False 2012-08-06 ENCODE 1 ENCFF419RSJ, ENCFF827SHX 12008 ENCODE Processing Pipeline ddf35125c16f920351fcf382e610ebef https://www.encodeproject.org/files/ENCFF556XQQ/@@download/ENCFF556XQQ.bed.gz GRCh38 released control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length ENCFF624BHU bigWig fold change over control ENCSR000ATZ ChIP-seq EFO:0002067 K562 cell line Homo sapiens KAT2B-human ENCAB000AJV DNA see document see document False 2012-08-06 ENCODE 1 ENCFF392XRJ, ENCFF570SBS 262566478 ENCODE Processing Pipeline f2e044bd18206e1ccabec6776ca0355c https://www.encodeproject.org/files/ENCFF624BHU/@@download/ENCFF624BHU.bigWig GRCh38 released control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length ENCFF000CAC bigBed broadPeak peaks ENCSR000AVE ChIP-seq EFO:0002067 K562 cell line Homo sapiens WHSC1-human ENCAB000AJL DNA see document see document False 2012-08-06 ENCODE ENCFF001SZU 1453844 Bradley Bernstein, Broad 222c564e7ab4d16eda40f5cb8c020cf6 https://www.encodeproject.org/files/ENCFF000CAC/@@download/ENCFF000CAC.bigBed hg19 archived control low read depth, inconsistent platforms, low read length ENCFF000CAD bigWig signal ENCSR000AVE ChIP-seq EFO:0002067 K562 cell line Homo sapiens WHSC1-human ENCAB000AJL DNA see document see document False 2012-08-06 ENCODE 418843191 Bradley Bernstein, Broad 8223f347eda93c88d387a80de0b98428 https://www.encodeproject.org/files/ENCFF000CAD/@@download/ENCFF000CAD.bigWig hg19 archived control low read depth, inconsistent platforms, low read length missing derived_from ENCFF000CAE bam alignments ENCSR000AVE ChIP-seq EFO:0002067 K562 cell line Homo sapiens WHSC1-human ENCAB000AJL DNA see document see document False 2012-08-06 ENCODE 1 ENCFF000CAK 1334099366 Bradley Bernstein, Broad 71ccda1e38f55acd6ac8fbf41d5a74cd https://www.encodeproject.org/files/ENCFF000CAE/@@download/ENCFF000CAE.bam hg19 archived control low read depth, inconsistent platforms, low read length ENCFF000CAK fastq reads ENCSR000AVE ChIP-seq EFO:0002067 K562 cell line Homo sapiens WHSC1-human ENCAB000AJL DNA see document see document False 2012-08-06 ENCODE 1 1 36 single-ended 1434105663 Bradley Bernstein, Broad 635be2b8a8c0f219fe2e05472498c9dd https://www.encodeproject.org/files/ENCFF000CAK/@@download/ENCFF000CAK.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000BWK/ released control low read depth, inconsistent platforms, low read length ENCFF001SZU bed broadPeak peaks ENCSR000AVE ChIP-seq EFO:0002067 K562 cell line Homo sapiens WHSC1-human ENCAB000AJL DNA see document see document False 2012-08-06 ENCODE 861263 Bradley Bernstein, Broad da1c6c67989a94b183501eff6601cd54 https://www.encodeproject.org/files/ENCFF001SZU/@@download/ENCFF001SZU.bed.gz hg19 archived control low read depth, inconsistent platforms, low read length missing derived_from ENCFF180HYH bam alignments ENCSR000AVE ChIP-seq EFO:0002067 K562 cell line Homo sapiens WHSC1-human ENCAB000AJL DNA see document see document False 2012-08-06 ENCODE 1 36 ENCFF000CAK, ENCFF807MUK 1118692408 ENCODE Processing Pipeline da68fc5067d52bb5cc85e3d485634a02 https://www.encodeproject.org/files/ENCFF180HYH/@@download/ENCFF180HYH.bam hg19 released control low read depth, inconsistent platforms, low read length ENCFF591MPS bam unfiltered alignments ENCSR000AVE ChIP-seq EFO:0002067 K562 cell line Homo sapiens WHSC1-human ENCAB000AJL DNA see document see document False 2012-08-06 ENCODE 1 36 ENCFF000CAK, ENCFF807MUK 1849624209 ENCODE Processing Pipeline dd5b24bcd0c43c5ea98a73c30cfc8950 https://www.encodeproject.org/files/ENCFF591MPS/@@download/ENCFF591MPS.bam hg19 released control low read depth, inconsistent platforms, low read length ENCFF176YLT bam unfiltered alignments ENCSR000AVE ChIP-seq EFO:0002067 K562 cell line Homo sapiens WHSC1-human ENCAB000AJL DNA see document see document False 2012-08-06 ENCODE 1 36 ENCFF000CAK, ENCFF643CGH 1856747570 ENCODE Processing Pipeline 5549e603450b4d1485d041fd152cf0ba https://www.encodeproject.org/files/ENCFF176YLT/@@download/ENCFF176YLT.bam GRCh38 released control low read depth, inconsistent platforms, low read length ENCFF942ZJL bam alignments ENCSR000AVE ChIP-seq EFO:0002067 K562 cell line Homo sapiens WHSC1-human ENCAB000AJL DNA see document see document False 2012-08-06 ENCODE 1 36 ENCFF000CAK, ENCFF643CGH 1117921279 ENCODE Processing Pipeline e29041ea7f35a3d5d9ec61d36b50dadd https://www.encodeproject.org/files/ENCFF942ZJL/@@download/ENCFF942ZJL.bam GRCh38 released control low read depth, inconsistent platforms, low read length ENCFF946VXN bigBed narrowPeak peaks ENCSR000AVE ChIP-seq EFO:0002067 K562 cell line Homo sapiens WHSC1-human ENCAB000AJL DNA see document see document False 2012-08-06 ENCODE 1 ENCFF714NDI 12812163 ENCODE Processing Pipeline adee301ff63a826cb9cac14e17194569 https://www.encodeproject.org/files/ENCFF946VXN/@@download/ENCFF946VXN.bigBed hg19 released control low read depth, inconsistent platforms, low read length ENCFF386EBW bigWig signal p-value ENCSR000AVE ChIP-seq EFO:0002067 K562 cell line Homo sapiens WHSC1-human ENCAB000AJL DNA see document see document False 2012-08-06 ENCODE 1 ENCFF180HYH, ENCFF574XYY 371820813 ENCODE Processing Pipeline 0da555795ef2f32a2566ba0fc4a27bb5 https://www.encodeproject.org/files/ENCFF386EBW/@@download/ENCFF386EBW.bigWig hg19 released control low read depth, inconsistent platforms, low read length ENCFF864WOR bigWig fold change over control ENCSR000AVE ChIP-seq EFO:0002067 K562 cell line Homo sapiens WHSC1-human ENCAB000AJL DNA see document see document False 2012-08-06 ENCODE 1 ENCFF180HYH, ENCFF574XYY 427233429 ENCODE Processing Pipeline d8a77b1af34a3bcef4cc1ca03102ea22 https://www.encodeproject.org/files/ENCFF864WOR/@@download/ENCFF864WOR.bigWig hg19 released control low read depth, inconsistent platforms, low read length ENCFF714NDI bed narrowPeak peaks ENCSR000AVE ChIP-seq EFO:0002067 K562 cell line Homo sapiens WHSC1-human ENCAB000AJL DNA see document see document False 2012-08-06 ENCODE 1 ENCFF180HYH, ENCFF574XYY 5600436 ENCODE Processing Pipeline e404f9cee25f574cd50e7e6435f4eeea https://www.encodeproject.org/files/ENCFF714NDI/@@download/ENCFF714NDI.bed.gz hg19 released control low read depth, inconsistent platforms, low read length ENCFF308YXQ bigBed narrowPeak pseudoreplicated idr thresholded peaks ENCSR000AVE ChIP-seq EFO:0002067 K562 cell line Homo sapiens WHSC1-human ENCAB000AJL DNA see document see document False 2012-08-06 ENCODE 1 ENCFF119SZQ 139644 ENCODE Processing Pipeline aeee29927e8df8f5cc9a9039ac9eb01f https://www.encodeproject.org/files/ENCFF308YXQ/@@download/ENCFF308YXQ.bigBed hg19 released control low read depth, inconsistent platforms, low read length ENCFF119SZQ bed narrowPeak pseudoreplicated idr thresholded peaks ENCSR000AVE ChIP-seq EFO:0002067 K562 cell line Homo sapiens WHSC1-human ENCAB000AJL DNA see document see document False 2012-08-06 ENCODE 1 ENCFF001TDO, ENCFF714NDI 40335 ENCODE Processing Pipeline 8a553a2c58776995e1c11e9309804ac6 https://www.encodeproject.org/files/ENCFF119SZQ/@@download/ENCFF119SZQ.bed.gz hg19 released control low read depth, inconsistent platforms, low read length ENCFF690EIR bed narrowPeak peaks ENCSR000AVE ChIP-seq EFO:0002067 K562 cell line Homo sapiens WHSC1-human ENCAB000AJL DNA see document see document False 2012-08-06 ENCODE 1 ENCFF392XRJ, ENCFF942ZJL 5594123 ENCODE Processing Pipeline 0d5653cd19114ddf53f6f91c1e16cc08 https://www.encodeproject.org/files/ENCFF690EIR/@@download/ENCFF690EIR.bed.gz GRCh38 released control low read depth, inconsistent platforms, low read length ENCFF336FFT bigWig signal p-value ENCSR000AVE ChIP-seq EFO:0002067 K562 cell line Homo sapiens WHSC1-human ENCAB000AJL DNA see document see document False 2012-08-06 ENCODE 1 ENCFF392XRJ, ENCFF942ZJL 371617973 ENCODE Processing Pipeline fb94915b4e9d4cef0fda2df79c660774 https://www.encodeproject.org/files/ENCFF336FFT/@@download/ENCFF336FFT.bigWig GRCh38 released control low read depth, inconsistent platforms, low read length ENCFF157ZQI bed narrowPeak pseudoreplicated idr thresholded peaks ENCSR000AVE ChIP-seq EFO:0002067 K562 cell line Homo sapiens WHSC1-human ENCAB000AJL DNA see document see document False 2012-08-06 ENCODE 1 ENCFF419RSJ, ENCFF690EIR 37641 ENCODE Processing Pipeline 1ba35432577e2284a365aab8265aab2a https://www.encodeproject.org/files/ENCFF157ZQI/@@download/ENCFF157ZQI.bed.gz GRCh38 released control low read depth, inconsistent platforms, low read length ENCFF813CWF bigWig fold change over control ENCSR000AVE ChIP-seq EFO:0002067 K562 cell line Homo sapiens WHSC1-human ENCAB000AJL DNA see document see document False 2012-08-06 ENCODE 1 ENCFF392XRJ, ENCFF942ZJL 426510611 ENCODE Processing Pipeline 46bdec5aec9c467b872fb169e69c0ce3 https://www.encodeproject.org/files/ENCFF813CWF/@@download/ENCFF813CWF.bigWig GRCh38 released control low read depth, inconsistent platforms, low read length ENCFF644EHG bigBed narrowPeak peaks ENCSR000AVE ChIP-seq EFO:0002067 K562 cell line Homo sapiens WHSC1-human ENCAB000AJL DNA see document see document False 2012-08-06 ENCODE 1 ENCFF690EIR 12823081 ENCODE Processing Pipeline 2a82cb1116ec126b748131accb33e85a https://www.encodeproject.org/files/ENCFF644EHG/@@download/ENCFF644EHG.bigBed GRCh38 released control low read depth, inconsistent platforms, low read length ENCFF581TWR bigBed narrowPeak pseudoreplicated idr thresholded peaks ENCSR000AVE ChIP-seq EFO:0002067 K562 cell line Homo sapiens WHSC1-human ENCAB000AJL DNA see document see document False 2012-08-06 ENCODE 1 ENCFF157ZQI 135389 ENCODE Processing Pipeline 75fba3577cfc9b8b6f926462149c1c86 https://www.encodeproject.org/files/ENCFF581TWR/@@download/ENCFF581TWR.bigBed GRCh38 released control low read depth, inconsistent platforms, low read length ENCFF000BVQ bigBed broadPeak peaks ENCSR000ATL ChIP-seq EFO:0002067 K562 cell line Homo sapiens CHD4-human ENCAB276UJU, ENCAB000AFH DNA see document see document False 2012-08-06 ENCODE ENCFF001SYY 455814 Bradley Bernstein, Broad 18b03440242844d6e029541e391849c3 https://www.encodeproject.org/files/ENCFF000BVQ/@@download/ENCFF000BVQ.bigBed hg19 archived mixed read lengths, inconsistent platforms, low read length ENCFF000BVR bam alignments ENCSR000ATL ChIP-seq EFO:0002067 K562 cell line Homo sapiens CHD4-human ENCAB276UJU, ENCAB000AFH DNA see document see document False 2012-08-06 ENCODE 1 ENCFF000BWE 863317155 Bradley Bernstein, Broad 587a47153fa51ea73ef20aff82e965fc https://www.encodeproject.org/files/ENCFF000BVR/@@download/ENCFF000BVR.bam hg19 archived mixed read lengths, inconsistent platforms, low read length ENCFF000BVT bigWig signal ENCSR000ATL ChIP-seq EFO:0002067 K562 cell line Homo sapiens CHD4-human ENCAB276UJU, ENCAB000AFH DNA see document see document False 2012-08-06 ENCODE 151801368 Bradley Bernstein, Broad 7351f4ff1e0978549d3b5e066d451d30 https://www.encodeproject.org/files/ENCFF000BVT/@@download/ENCFF000BVT.bigWig hg19 archived mixed read lengths, inconsistent platforms, low read length missing derived_from ENCFF000BWE fastq reads ENCSR000ATL ChIP-seq EFO:0002067 K562 cell line Homo sapiens CHD4-human ENCAB276UJU, ENCAB000AFH DNA see document see document False 2012-08-06 ENCODE 1 1 36 single-ended 1160139531 Bradley Bernstein, Broad 02d749f85be8d8cfcbc70a6410dc16be https://www.encodeproject.org/files/ENCFF000BWE/@@download/ENCFF000BWE.fastq.gz Illumina HiSeq 2000 /files/ENCFF000BWK/ released mixed read lengths, inconsistent platforms, low read length ENCFF001SYY bed broadPeak peaks ENCSR000ATL ChIP-seq EFO:0002067 K562 cell line Homo sapiens CHD4-human ENCAB276UJU, ENCAB000AFH DNA see document see document False 2012-08-06 ENCODE 234598 Bradley Bernstein, Broad 723685ebf6ca0fdcd5b0e35551c68475 https://www.encodeproject.org/files/ENCFF001SYY/@@download/ENCFF001SYY.bed.gz hg19 archived mixed read lengths, inconsistent platforms, low read length missing derived_from ENCFF030MWT fastq reads ENCSR000ATL ChIP-seq EFO:0002067 K562 cell line Homo sapiens CHD4-human ENCAB276UJU, ENCAB000AFH DNA see document see document False 2012-08-06 ENCODE 2 1 36 single-ended 367487699 Bradley Bernstein, Broad cb3e8316f1b3dc81f7b3a6d998485b72 https://www.encodeproject.org/files/ENCFF030MWT/@@download/ENCFF030MWT.fastq.gz Illumina HiSeq 2500 released mixed read lengths, inconsistent platforms, low read length missing controlled_by ENCFF011ZDE fastq reads ENCSR000ATL ChIP-seq EFO:0002067 K562 cell line Homo sapiens CHD4-human ENCAB276UJU, ENCAB000AFH DNA see document see document False 2012-08-06 ENCODE 3 1 76 single-ended 2047869719 Bradley Bernstein, Broad 536ab5cf3730eb8f2279bc6b224f67dd https://www.encodeproject.org/files/ENCFF011ZDE/@@download/ENCFF011ZDE.fastq.gz Illumina HiSeq 2500 released mixed read lengths, inconsistent platforms, low read length missing controlled_by ENCFF000BZC bam alignments ENCSR000AQF ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC1-human ENCAB649LYF DNA see document see document False 2012-03-06 ENCODE 1 1 1380023500 Bradley Bernstein, Broad cd45dd74d736750edc525b34be0c8408 https://www.encodeproject.org/files/ENCFF000BZC/@@download/ENCFF000BZC.bam hg19 archived control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample, missing raw data in replicate, missing derived_from insufficient replicate concordance ENCFF000BZD bigBed broadPeak peaks ENCSR000AQF ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC1-human ENCAB649LYF DNA see document see document False 2012-03-06 ENCODE ENCFF001SZP 3731332 Bradley Bernstein, Broad a2169f3a5c3ebd5a9e012eb3baee2d64 https://www.encodeproject.org/files/ENCFF000BZD/@@download/ENCFF000BZD.bigBed hg19 archived control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample, missing raw data in replicate insufficient replicate concordance ENCFF000BZE bam alignments ENCSR000AQF ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC1-human ENCAB649LYF DNA see document see document False 2012-03-06 ENCODE 2 1 1059817078 Bradley Bernstein, Broad 7beb4a2d1a9b7c4d8e841dab42c4755a https://www.encodeproject.org/files/ENCFF000BZE/@@download/ENCFF000BZE.bam hg19 archived control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample, missing derived_from, missing raw data in replicate insufficient replicate concordance ENCFF000BZF bigWig signal ENCSR000AQF ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC1-human ENCAB649LYF DNA see document see document False 2012-03-06 ENCODE 479829066 Bradley Bernstein, Broad 76b52d53a629bcbce73cb2907d05d881 https://www.encodeproject.org/files/ENCFF000BZF/@@download/ENCFF000BZF.bigWig hg19 archived control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample, missing derived_from, missing raw data in replicate insufficient replicate concordance ENCFF001SZP bed broadPeak peaks ENCSR000AQF ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC1-human ENCAB649LYF DNA see document see document False 2012-03-06 ENCODE 2470892 Bradley Bernstein, Broad d0026a52d6bea2c296b0363ea5872197 https://www.encodeproject.org/files/ENCFF001SZP/@@download/ENCFF001SZP.bed.gz hg19 archived control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample, missing derived_from, missing raw data in replicate insufficient replicate concordance ENCFF002CEN bed narrowPeak optimal idr thresholded peaks ENCSR000AQF ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC1-human ENCAB649LYF DNA see document see document False 2012-03-06 ENCODE 274053 ENCODE Consortium Analysis Working Group f5a3c9dd317402f9b15b3c8a2028839c https://www.encodeproject.org/files/ENCFF002CEN/@@download/ENCFF002CEN.bed.gz hg19 archived control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample, missing raw data in replicate, missing derived_from insufficient replicate concordance ENCFF365FRX bigBed narrowPeak optimal idr thresholded peaks ENCSR000AQF ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC1-human ENCAB649LYF DNA see document see document False 2012-03-06 ENCODE ENCFF002CEN 740197 ENCODE Consortium f04bdba41ce0b6a9a024c9254a4d5f74 https://www.encodeproject.org/files/ENCFF365FRX/@@download/ENCFF365FRX.bigBed hg19 archived control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample, missing raw data in replicate insufficient replicate concordance ENCFF594HPD fastq reads ENCSR000AQF ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC1-human ENCAB649LYF DNA see document see document False 2012-03-06 ENCODE 2 1 36 single-ended 1407602703 Bradley Bernstein, Broad 826b36a956025b2d520d9a22f9ecd52e https://www.encodeproject.org/files/ENCFF594HPD/@@download/ENCFF594HPD.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF283HQV/, /files/ENCFF994FIB/ released control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample, missing raw data in replicate insufficient replicate concordance ENCFF269QCW fastq reads ENCSR000AQF ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC1-human ENCAB649LYF DNA see document see document False 2012-03-06 ENCODE 1 1 36 single-ended 1644208278 Bradley Bernstein, Broad 82bac54b95a5a791b6cdf07728cc7e9c https://www.encodeproject.org/files/ENCFF269QCW/@@download/ENCFF269QCW.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000BWK/ released control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample, missing raw data in replicate insufficient replicate concordance ENCFF512DGF fastq reads ENCSR000AQF ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC1-human ENCAB649LYF DNA see document see document False 2012-03-06 ENCODE 3 1 25 paired-ended 1 ENCFF988QDS 980885807 Bradley Bernstein, Broad cbd59a64624e9324633dae21214060aa https://www.encodeproject.org/files/ENCFF512DGF/@@download/ENCFF512DGF.fastq.gz Illumina HiSeq 2500 archived control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample, missing raw data in replicate insufficient replicate concordance, missing controlled_by ENCFF988QDS fastq reads ENCSR000AQF ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC1-human ENCAB649LYF DNA see document see document False 2012-03-06 ENCODE 3 1 25 paired-ended 2 ENCFF512DGF 988322933 Bradley Bernstein, Broad 495717047ab89500881f4b76c220b661 https://www.encodeproject.org/files/ENCFF988QDS/@@download/ENCFF988QDS.fastq.gz Illumina HiSeq 2500 archived control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample, missing raw data in replicate insufficient replicate concordance, missing controlled_by ENCFF832OQS bam unfiltered alignments ENCSR000AQF ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC1-human ENCAB649LYF DNA see document see document False 2012-03-06 ENCODE 1 36 ENCFF269QCW, ENCFF643CGH 2083236710 ENCODE Processing Pipeline 3d815e51a1d607a382d8ec16eb18fb33 https://www.encodeproject.org/files/ENCFF832OQS/@@download/ENCFF832OQS.bam GRCh38 released control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample, missing raw data in replicate insufficient replicate concordance ENCFF105UTO bam unfiltered alignments ENCSR000AQF ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC1-human ENCAB649LYF DNA see document see document False 2012-03-06 ENCODE 1 36 ENCFF269QCW, ENCFF807MUK 2074864379 ENCODE Processing Pipeline 03fcfc3765e1eaa9d1033438a117bda9 https://www.encodeproject.org/files/ENCFF105UTO/@@download/ENCFF105UTO.bam hg19 released control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample, missing raw data in replicate insufficient replicate concordance ENCFF619AJU bam alignments ENCSR000AQF ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC1-human ENCAB649LYF DNA see document see document False 2012-03-06 ENCODE 2 36 ENCFF594HPD, ENCFF643CGH 603421799 ENCODE Processing Pipeline 9f1bdc27de6edbae72f98bcdab698bfe https://www.encodeproject.org/files/ENCFF619AJU/@@download/ENCFF619AJU.bam GRCh38 released control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample, missing raw data in replicate insufficient replicate concordance ENCFF977TIR bam unfiltered alignments ENCSR000AQF ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC1-human ENCAB649LYF DNA see document see document False 2012-03-06 ENCODE 2 36 ENCFF594HPD, ENCFF643CGH 1752065017 ENCODE Processing Pipeline 37ffe8e057ede2d51646ca4134f38ef3 https://www.encodeproject.org/files/ENCFF977TIR/@@download/ENCFF977TIR.bam GRCh38 released control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample, missing raw data in replicate insufficient replicate concordance ENCFF564MCX bam alignments ENCSR000AQF ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC1-human ENCAB649LYF DNA see document see document False 2012-03-06 ENCODE 2 36 ENCFF594HPD, ENCFF807MUK 603816064 ENCODE Processing Pipeline 1aa03c92d98c8cf405c97c26ba542f30 https://www.encodeproject.org/files/ENCFF564MCX/@@download/ENCFF564MCX.bam hg19 released control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample, missing raw data in replicate insufficient replicate concordance ENCFF698XSR bam alignments ENCSR000AQF ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC1-human ENCAB649LYF DNA see document see document False 2012-03-06 ENCODE 1 36 ENCFF269QCW, ENCFF643CGH 802436260 ENCODE Processing Pipeline d7da76f447d2407f19f9f5a8beb32989 https://www.encodeproject.org/files/ENCFF698XSR/@@download/ENCFF698XSR.bam GRCh38 released control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample, missing raw data in replicate insufficient replicate concordance ENCFF570JFU bam unfiltered alignments ENCSR000AQF ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC1-human ENCAB649LYF DNA see document see document False 2012-03-06 ENCODE 2 36 ENCFF594HPD, ENCFF807MUK 1743848821 ENCODE Processing Pipeline b79e0ce03f60c1d7a61749f7cd616ca9 https://www.encodeproject.org/files/ENCFF570JFU/@@download/ENCFF570JFU.bam hg19 released control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample, missing raw data in replicate insufficient replicate concordance ENCFF552DDV bam alignments ENCSR000AQF ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC1-human ENCAB649LYF DNA see document see document False 2012-03-06 ENCODE 1 36 ENCFF269QCW, ENCFF807MUK 803068676 ENCODE Processing Pipeline 612a777fe95347b367bcc5fad666fc8c https://www.encodeproject.org/files/ENCFF552DDV/@@download/ENCFF552DDV.bam hg19 released control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample, missing raw data in replicate insufficient replicate concordance ENCFF958AKY bigWig signal p-value ENCSR000AQF ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC1-human ENCAB649LYF DNA see document see document False 2012-03-06 ENCODE 1 ENCFF392XRJ, ENCFF698XSR, ENCFF829HZY 537534461 ENCODE Processing Pipeline 4bc31b03215de1cb1fa52fc19a4426e6 https://www.encodeproject.org/files/ENCFF958AKY/@@download/ENCFF958AKY.bigWig GRCh38 released control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample, missing raw data in replicate insufficient replicate concordance ENCFF003PUA bigWig signal p-value ENCSR000AQF ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC1-human ENCAB649LYF DNA see document see document False 2012-03-06 ENCODE 1 ENCFF245PJA, ENCFF552DDV, ENCFF574XYY 492903510 ENCODE Processing Pipeline 36848be363875d54f8b5d958fab4381b https://www.encodeproject.org/files/ENCFF003PUA/@@download/ENCFF003PUA.bigWig hg19 released control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample, missing raw data in replicate insufficient replicate concordance ENCFF288AIT bigWig fold change over control ENCSR000AQF ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC1-human ENCAB649LYF DNA see document see document False 2012-03-06 ENCODE 1 ENCFF392XRJ, ENCFF698XSR, ENCFF829HZY 359346481 ENCODE Processing Pipeline 4c7a0ba98ff9011d33277f65a9916ad6 https://www.encodeproject.org/files/ENCFF288AIT/@@download/ENCFF288AIT.bigWig GRCh38 released control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample, missing raw data in replicate insufficient replicate concordance ENCFF711QEW bigWig fold change over control ENCSR000AQF ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC1-human ENCAB649LYF DNA see document see document False 2012-03-06 ENCODE 1 ENCFF245PJA, ENCFF552DDV, ENCFF574XYY 356585941 ENCODE Processing Pipeline 672926c1a7006140818c5e9ee5350161 https://www.encodeproject.org/files/ENCFF711QEW/@@download/ENCFF711QEW.bigWig hg19 released control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample, missing raw data in replicate insufficient replicate concordance ENCFF822EWL bigWig signal p-value ENCSR000AQF ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC1-human ENCAB649LYF DNA see document see document False 2012-03-06 ENCODE 2 ENCFF245PJA, ENCFF564MCX 364579378 ENCODE Processing Pipeline 4471e60fe964ca5da2d58b5d8a353d2e https://www.encodeproject.org/files/ENCFF822EWL/@@download/ENCFF822EWL.bigWig hg19 released control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample, missing raw data in replicate insufficient replicate concordance ENCFF589RXS bigWig signal p-value ENCSR000AQF ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC1-human ENCAB649LYF DNA see document see document False 2012-03-06 ENCODE 1, 2 ENCFF245PJA, ENCFF552DDV, ENCFF564MCX, ENCFF574XYY 654138436 ENCODE Processing Pipeline 378dd5ed71fcde8d6ba149a986151661 https://www.encodeproject.org/files/ENCFF589RXS/@@download/ENCFF589RXS.bigWig hg19 released control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample, missing raw data in replicate insufficient replicate concordance ENCFF445XTX bed narrowPeak peaks ENCSR000AQF ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC1-human ENCAB649LYF DNA see document see document False 2012-03-06 ENCODE 1, 2 ENCFF245PJA, ENCFF552DDV, ENCFF564MCX, ENCFF574XYY 6593091 ENCODE Processing Pipeline db83c687c4c3371f81aebb89beb9fc56 https://www.encodeproject.org/files/ENCFF445XTX/@@download/ENCFF445XTX.bed.gz hg19 released control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample, missing raw data in replicate insufficient replicate concordance ENCFF207GGD bigWig signal p-value ENCSR000AQF ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC1-human ENCAB649LYF DNA see document see document False 2012-03-06 ENCODE 2 ENCFF619AJU, ENCFF829HZY 314783286 ENCODE Processing Pipeline 731f92a100abafe8d52f4d085980fbc3 https://www.encodeproject.org/files/ENCFF207GGD/@@download/ENCFF207GGD.bigWig GRCh38 released control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample, missing raw data in replicate insufficient replicate concordance ENCFF624ZMB bed narrowPeak peaks ENCSR000AQF ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC1-human ENCAB649LYF DNA see document see document False 2012-03-06 ENCODE 2 ENCFF245PJA, ENCFF564MCX 4089103 ENCODE Processing Pipeline ea82d4eed548e69a4de334be39dbb6d8 https://www.encodeproject.org/files/ENCFF624ZMB/@@download/ENCFF624ZMB.bed.gz hg19 released control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample, missing raw data in replicate insufficient replicate concordance ENCFF730PEC bigWig fold change over control ENCSR000AQF ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC1-human ENCAB649LYF DNA see document see document False 2012-03-06 ENCODE 1, 2 ENCFF392XRJ, ENCFF619AJU, ENCFF698XSR, ENCFF829HZY 602731329 ENCODE Processing Pipeline 5355b16d99c6ca54a1b67654b61ea993 https://www.encodeproject.org/files/ENCFF730PEC/@@download/ENCFF730PEC.bigWig GRCh38 released control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample, missing raw data in replicate insufficient replicate concordance ENCFF451XDT bed narrowPeak peaks ENCSR000AQF ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC1-human ENCAB649LYF DNA see document see document False 2012-03-06 ENCODE 1, 2 ENCFF392XRJ, ENCFF619AJU, ENCFF698XSR, ENCFF829HZY 6593181 ENCODE Processing Pipeline e9e8547d11621019dfdd58c4b2caad82 https://www.encodeproject.org/files/ENCFF451XDT/@@download/ENCFF451XDT.bed.gz GRCh38 released control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample, missing raw data in replicate insufficient replicate concordance ENCFF557FEK bigWig signal p-value ENCSR000AQF ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC1-human ENCAB649LYF DNA see document see document False 2012-03-06 ENCODE 1, 2 ENCFF392XRJ, ENCFF619AJU, ENCFF698XSR, ENCFF829HZY 653453267 ENCODE Processing Pipeline 8e40dc4e3663b5ce5e426e369237e22d https://www.encodeproject.org/files/ENCFF557FEK/@@download/ENCFF557FEK.bigWig GRCh38 released control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample, missing raw data in replicate insufficient replicate concordance ENCFF333THQ bigWig fold change over control ENCSR000AQF ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC1-human ENCAB649LYF DNA see document see document False 2012-03-06 ENCODE 2 ENCFF619AJU, ENCFF829HZY 285166603 ENCODE Processing Pipeline df5ab07761ddce84cfd07ecf8eab2717 https://www.encodeproject.org/files/ENCFF333THQ/@@download/ENCFF333THQ.bigWig GRCh38 released control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample, missing raw data in replicate insufficient replicate concordance ENCFF200WFO bed narrowPeak peaks ENCSR000AQF ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC1-human ENCAB649LYF DNA see document see document False 2012-03-06 ENCODE 1 ENCFF245PJA, ENCFF552DDV, ENCFF574XYY 6262092 ENCODE Processing Pipeline 584d30694373b6331099acf9088ef033 https://www.encodeproject.org/files/ENCFF200WFO/@@download/ENCFF200WFO.bed.gz hg19 released control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample, missing raw data in replicate insufficient replicate concordance ENCFF632RCU bigBed narrowPeak peaks ENCSR000AQF ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC1-human ENCAB649LYF DNA see document see document False 2012-03-06 ENCODE 2 ENCFF624ZMB 10349655 ENCODE Processing Pipeline 93f1825fb20e28bdd51a7c5faad25005 https://www.encodeproject.org/files/ENCFF632RCU/@@download/ENCFF632RCU.bigBed hg19 released control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample, missing raw data in replicate insufficient replicate concordance ENCFF957IOZ bed narrowPeak peaks ENCSR000AQF ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC1-human ENCAB649LYF DNA see document see document False 2012-03-06 ENCODE 1 ENCFF392XRJ, ENCFF698XSR, ENCFF829HZY 6230662 ENCODE Processing Pipeline eb2d48e264637a5ff56086279676d4d2 https://www.encodeproject.org/files/ENCFF957IOZ/@@download/ENCFF957IOZ.bed.gz GRCh38 released control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample, missing raw data in replicate insufficient replicate concordance ENCFF768HUH bigBed narrowPeak conservative idr thresholded peaks ENCSR000AQF ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC1-human ENCAB649LYF DNA see document see document False 2012-03-06 ENCODE 1, 2 ENCFF130EPK 339504 ENCODE Processing Pipeline 86840b51ec033dbc9a369ddf5ca782c5 https://www.encodeproject.org/files/ENCFF768HUH/@@download/ENCFF768HUH.bigBed hg19 released control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample, missing raw data in replicate insufficient replicate concordance ENCFF355ZSE bigWig fold change over control ENCSR000AQF ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC1-human ENCAB649LYF DNA see document see document False 2012-03-06 ENCODE 1, 2 ENCFF245PJA, ENCFF552DDV, ENCFF564MCX, ENCFF574XYY 603575881 ENCODE Processing Pipeline e7d109e8fe557fe8dfd8f0f6c06d9fdc https://www.encodeproject.org/files/ENCFF355ZSE/@@download/ENCFF355ZSE.bigWig hg19 released control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample, missing raw data in replicate insufficient replicate concordance ENCFF186FPQ bed narrowPeak peaks ENCSR000AQF ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC1-human ENCAB649LYF DNA see document see document False 2012-03-06 ENCODE 2 ENCFF619AJU, ENCFF829HZY 4086222 ENCODE Processing Pipeline 0fc4c6ace37489f3bb0a1d61c5be4a3e https://www.encodeproject.org/files/ENCFF186FPQ/@@download/ENCFF186FPQ.bed.gz GRCh38 released control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample, missing raw data in replicate insufficient replicate concordance ENCFF130EPK bed narrowPeak conservative idr thresholded peaks ENCSR000AQF ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC1-human ENCAB649LYF DNA see document see document False 2012-03-06 ENCODE 1, 2 ENCFF001TDO, ENCFF200WFO, ENCFF445XTX, ENCFF624ZMB 126972 ENCODE Processing Pipeline 9ce02ac022cf18c0759adbb97ecdec78 https://www.encodeproject.org/files/ENCFF130EPK/@@download/ENCFF130EPK.bed.gz hg19 released control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample, missing raw data in replicate insufficient replicate concordance ENCFF731ACC bigWig fold change over control ENCSR000AQF ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC1-human ENCAB649LYF DNA see document see document False 2012-03-06 ENCODE 2 ENCFF245PJA, ENCFF564MCX 284422950 ENCODE Processing Pipeline 578eb496a49879eb99275a05473b7499 https://www.encodeproject.org/files/ENCFF731ACC/@@download/ENCFF731ACC.bigWig hg19 released control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample, missing raw data in replicate insufficient replicate concordance ENCFF813KNZ bigBed narrowPeak peaks ENCSR000AQF ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC1-human ENCAB649LYF DNA see document see document False 2012-03-06 ENCODE 1 ENCFF200WFO 12916793 ENCODE Processing Pipeline ddde0770958a966decb281fc60c716bd https://www.encodeproject.org/files/ENCFF813KNZ/@@download/ENCFF813KNZ.bigBed hg19 released control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample, missing raw data in replicate insufficient replicate concordance ENCFF075KDX bigBed narrowPeak peaks ENCSR000AQF ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC1-human ENCAB649LYF DNA see document see document False 2012-03-06 ENCODE 1, 2 ENCFF445XTX 13068196 ENCODE Processing Pipeline a02b278c41efb45da91e5183a0b08ef3 https://www.encodeproject.org/files/ENCFF075KDX/@@download/ENCFF075KDX.bigBed hg19 released control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample, missing raw data in replicate insufficient replicate concordance ENCFF357NRL bed narrowPeak optimal idr thresholded peaks ENCSR000AQF ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC1-human ENCAB649LYF DNA see document see document False 2012-03-06 ENCODE 1, 2 ENCFF001TDO, ENCFF200WFO, ENCFF445XTX, ENCFF624ZMB 306918 ENCODE Processing Pipeline 4beb039261783c24cc5bb12c501a81ac https://www.encodeproject.org/files/ENCFF357NRL/@@download/ENCFF357NRL.bed.gz hg19 released control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample, missing raw data in replicate insufficient replicate concordance ENCFF988QIS bigBed narrowPeak peaks ENCSR000AQF ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC1-human ENCAB649LYF DNA see document see document False 2012-03-06 ENCODE 1 ENCFF957IOZ 12890437 ENCODE Processing Pipeline 5dbe83089815e03cf08c37983a00425b https://www.encodeproject.org/files/ENCFF988QIS/@@download/ENCFF988QIS.bigBed GRCh38 released control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample, missing raw data in replicate insufficient replicate concordance ENCFF273ZOG bigBed narrowPeak optimal idr thresholded peaks ENCSR000AQF ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC1-human ENCAB649LYF DNA see document see document False 2012-03-06 ENCODE 1, 2 ENCFF557WXK 744038 ENCODE Processing Pipeline cee4764969209334d5f0018ee7223184 https://www.encodeproject.org/files/ENCFF273ZOG/@@download/ENCFF273ZOG.bigBed GRCh38 released control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample, missing raw data in replicate insufficient replicate concordance ENCFF298LOI bigBed narrowPeak optimal idr thresholded peaks ENCSR000AQF ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC1-human ENCAB649LYF DNA see document see document False 2012-03-06 ENCODE 1, 2 ENCFF357NRL 743724 ENCODE Processing Pipeline 08b3fcc81be3b5c2d3c7a88e1ed915b5 https://www.encodeproject.org/files/ENCFF298LOI/@@download/ENCFF298LOI.bigBed hg19 released control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample, missing raw data in replicate insufficient replicate concordance ENCFF234OKP bigBed narrowPeak peaks ENCSR000AQF ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC1-human ENCAB649LYF DNA see document see document False 2012-03-06 ENCODE 2 ENCFF186FPQ 10357589 ENCODE Processing Pipeline a7e0b65bf71378675f3a59e89e4734a3 https://www.encodeproject.org/files/ENCFF234OKP/@@download/ENCFF234OKP.bigBed GRCh38 released control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample, missing raw data in replicate insufficient replicate concordance ENCFF016MVN bed narrowPeak conservative idr thresholded peaks ENCSR000AQF ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC1-human ENCAB649LYF DNA see document see document False 2012-03-06 ENCODE 1, 2 ENCFF186FPQ, ENCFF419RSJ, ENCFF451XDT, ENCFF957IOZ 128478 ENCODE Processing Pipeline f23bd1199cbf0d0723eea11d5a0d0e1a https://www.encodeproject.org/files/ENCFF016MVN/@@download/ENCFF016MVN.bed.gz GRCh38 released control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample, missing raw data in replicate insufficient replicate concordance ENCFF953WXK bigBed narrowPeak peaks ENCSR000AQF ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC1-human ENCAB649LYF DNA see document see document False 2012-03-06 ENCODE 1, 2 ENCFF451XDT 13074058 ENCODE Processing Pipeline 79677ff73440a793f287415727072158 https://www.encodeproject.org/files/ENCFF953WXK/@@download/ENCFF953WXK.bigBed GRCh38 released control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample, missing raw data in replicate insufficient replicate concordance ENCFF269NFC bigBed narrowPeak conservative idr thresholded peaks ENCSR000AQF ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC1-human ENCAB649LYF DNA see document see document False 2012-03-06 ENCODE 1, 2 ENCFF016MVN 342305 ENCODE Processing Pipeline 9cba638a0da7b99151892d7b4f545ea2 https://www.encodeproject.org/files/ENCFF269NFC/@@download/ENCFF269NFC.bigBed GRCh38 released control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample, missing raw data in replicate insufficient replicate concordance ENCFF557WXK bed narrowPeak optimal idr thresholded peaks ENCSR000AQF ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC1-human ENCAB649LYF DNA see document see document False 2012-03-06 ENCODE 1, 2 ENCFF186FPQ, ENCFF419RSJ, ENCFF451XDT, ENCFF957IOZ 306909 ENCODE Processing Pipeline 2fd127e707de89023dde25732e1cf762 https://www.encodeproject.org/files/ENCFF557WXK/@@download/ENCFF557WXK.bed.gz GRCh38 released control low read depth, inconsistent platforms, low read depth, mild to moderate bottlenecking, moderate library complexity, low read length biological replicates with identical biosample, missing raw data in replicate insufficient replicate concordance ENCFF000BVK bam alignments ENCSR000AQD ChIP-seq EFO:0002067 K562 cell line Homo sapiens CHD1-human ENCAB000AFE DNA see document see document False 2012-03-06 ENCODE 1 2 817357775 Bradley Bernstein, Broad 5da9827158f777bcd1d4793ef89ac74c https://www.encodeproject.org/files/ENCFF000BVK/@@download/ENCFF000BVK.bam hg19 archived inconsistent platforms, mild to moderate bottlenecking, low read length, moderate library complexity missing raw data in replicate, missing derived_from ENCFF000BVL bigBed broadPeak peaks ENCSR000AQD ChIP-seq EFO:0002067 K562 cell line Homo sapiens CHD1-human ENCAB000AFE DNA see document see document False 2012-03-06 ENCODE ENCFF001SZA 5006586 Bradley Bernstein, Broad c4620a7deb4454587407602ca71fb118 https://www.encodeproject.org/files/ENCFF000BVL/@@download/ENCFF000BVL.bigBed hg19 archived inconsistent platforms, mild to moderate bottlenecking, low read length, moderate library complexity missing raw data in replicate ENCFF000BVM bam alignments ENCSR000AQD ChIP-seq EFO:0002067 K562 cell line Homo sapiens CHD1-human ENCAB000AFE DNA see document see document False 2012-03-06 ENCODE 1 1 1330315498 Bradley Bernstein, Broad 44106358b07db2448e6456f34e7c2b1a https://www.encodeproject.org/files/ENCFF000BVM/@@download/ENCFF000BVM.bam hg19 archived inconsistent platforms, mild to moderate bottlenecking, low read length, moderate library complexity missing derived_from, missing raw data in replicate ENCFF000BVO bigWig signal ENCSR000AQD ChIP-seq EFO:0002067 K562 cell line Homo sapiens CHD1-human ENCAB000AFE DNA see document see document False 2012-03-06 ENCODE 466632647 Bradley Bernstein, Broad 4d9d8ded8162c90aaff44e02cc5426cf https://www.encodeproject.org/files/ENCFF000BVO/@@download/ENCFF000BVO.bigWig hg19 archived inconsistent platforms, mild to moderate bottlenecking, low read length, moderate library complexity missing derived_from, missing raw data in replicate ENCFF001SZA bed broadPeak peaks ENCSR000AQD ChIP-seq EFO:0002067 K562 cell line Homo sapiens CHD1-human ENCAB000AFE DNA see document see document False 2012-03-06 ENCODE 3172110 Bradley Bernstein, Broad 913aef020715611097d3fb4fe0d2df2c https://www.encodeproject.org/files/ENCFF001SZA/@@download/ENCFF001SZA.bed.gz hg19 archived inconsistent platforms, mild to moderate bottlenecking, low read length, moderate library complexity missing derived_from, missing raw data in replicate ENCFF002CEK bed narrowPeak optimal idr thresholded peaks ENCSR000AQD ChIP-seq EFO:0002067 K562 cell line Homo sapiens CHD1-human ENCAB000AFE DNA see document see document False 2012-03-06 ENCODE 231778 ENCODE Consortium Analysis Working Group 5bfc2bf2123f8f00c74dbb393c91d933 https://www.encodeproject.org/files/ENCFF002CEK/@@download/ENCFF002CEK.bed.gz hg19 archived inconsistent platforms, mild to moderate bottlenecking, low read length, moderate library complexity missing derived_from, missing raw data in replicate ENCFF830UWV bigBed narrowPeak optimal idr thresholded peaks ENCSR000AQD ChIP-seq EFO:0002067 K562 cell line Homo sapiens CHD1-human ENCAB000AFE DNA see document see document False 2012-03-06 ENCODE ENCFF002CEK 606726 ENCODE Consortium ca6fd306ed87cc5298b00e421a390f34 https://www.encodeproject.org/files/ENCFF830UWV/@@download/ENCFF830UWV.bigBed hg19 archived inconsistent platforms, mild to moderate bottlenecking, low read length, moderate library complexity missing raw data in replicate ENCFF577WJZ fastq reads ENCSR000AQD ChIP-seq EFO:0002067 K562 cell line Homo sapiens CHD1-human ENCAB000AFE DNA see document see document False 2012-03-06 ENCODE 1 2 36 single-ended 1035660549 Bradley Bernstein, Broad ac6e7039cbc1411e6e959308cf6b634e https://www.encodeproject.org/files/ENCFF577WJZ/@@download/ENCFF577WJZ.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000BWK/ released inconsistent platforms, mild to moderate bottlenecking, low read length, moderate library complexity missing raw data in replicate ENCFF856DUA fastq reads ENCSR000AQD ChIP-seq EFO:0002067 K562 cell line Homo sapiens CHD1-human ENCAB000AFE DNA see document see document False 2012-03-06 ENCODE 1 1 36 single-ended 1305954294 Bradley Bernstein, Broad 58dfa7aad693cff05e3a6da0101043ba https://www.encodeproject.org/files/ENCFF856DUA/@@download/ENCFF856DUA.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000BWK/ released inconsistent platforms, mild to moderate bottlenecking, low read length, moderate library complexity missing raw data in replicate ENCFF806DZB fastq reads ENCSR000AQD ChIP-seq EFO:0002067 K562 cell line Homo sapiens CHD1-human ENCAB000AFE DNA see document see document False 2012-03-06 ENCODE 2 1 25 paired-ended 1 ENCFF524YQH 1810892155 Bradley Bernstein, Broad 4fabc594625bcc2ed4c3b535fddcc13f https://www.encodeproject.org/files/ENCFF806DZB/@@download/ENCFF806DZB.fastq.gz Illumina HiSeq 2500 archived inconsistent platforms, mild to moderate bottlenecking, low read length, moderate library complexity missing raw data in replicate missing controlled_by ENCFF524YQH fastq reads ENCSR000AQD ChIP-seq EFO:0002067 K562 cell line Homo sapiens CHD1-human ENCAB000AFE DNA see document see document False 2012-03-06 ENCODE 2 1 25 paired-ended 2 ENCFF806DZB 1827975550 Bradley Bernstein, Broad 9b53b94f3ef71f13e1815f545be6fa3c https://www.encodeproject.org/files/ENCFF524YQH/@@download/ENCFF524YQH.fastq.gz Illumina HiSeq 2500 archived inconsistent platforms, mild to moderate bottlenecking, low read length, moderate library complexity missing raw data in replicate missing controlled_by ENCFF825VEV bam alignments ENCSR000AQD ChIP-seq EFO:0002067 K562 cell line Homo sapiens CHD1-human ENCAB000AFE DNA see document see document False 2012-03-06 ENCODE 1 36 ENCFF577WJZ, ENCFF643CGH, ENCFF856DUA 1213983027 ENCODE Processing Pipeline c58580358a2ebe8047bd20d9ce32dac5 https://www.encodeproject.org/files/ENCFF825VEV/@@download/ENCFF825VEV.bam GRCh38 released inconsistent platforms, mild to moderate bottlenecking, low read length, moderate library complexity missing raw data in replicate ENCFF564VAD bam unfiltered alignments ENCSR000AQD ChIP-seq EFO:0002067 K562 cell line Homo sapiens CHD1-human ENCAB000AFE DNA see document see document False 2012-03-06 ENCODE 1 36 ENCFF577WJZ, ENCFF807MUK, ENCFF856DUA 2974846144 ENCODE Processing Pipeline cabb8fe7667bc1d9e059e230eb8d2edf https://www.encodeproject.org/files/ENCFF564VAD/@@download/ENCFF564VAD.bam hg19 released inconsistent platforms, mild to moderate bottlenecking, low read length, moderate library complexity missing raw data in replicate ENCFF166HPZ bam unfiltered alignments ENCSR000AQD ChIP-seq EFO:0002067 K562 cell line Homo sapiens CHD1-human ENCAB000AFE DNA see document see document False 2012-03-06 ENCODE 1 36 ENCFF577WJZ, ENCFF643CGH, ENCFF856DUA 2994665683 ENCODE Processing Pipeline a48e3377f20eb06d13bf575a8cd97e9b https://www.encodeproject.org/files/ENCFF166HPZ/@@download/ENCFF166HPZ.bam GRCh38 released inconsistent platforms, mild to moderate bottlenecking, low read length, moderate library complexity missing raw data in replicate ENCFF613MQJ bam alignments ENCSR000AQD ChIP-seq EFO:0002067 K562 cell line Homo sapiens CHD1-human ENCAB000AFE DNA see document see document False 2012-03-06 ENCODE 1 36 ENCFF577WJZ, ENCFF807MUK, ENCFF856DUA 1214992155 ENCODE Processing Pipeline bf8cda427e312b31323db26887032b5b https://www.encodeproject.org/files/ENCFF613MQJ/@@download/ENCFF613MQJ.bam hg19 released inconsistent platforms, mild to moderate bottlenecking, low read length, moderate library complexity missing raw data in replicate ENCFF655PTL bam unfiltered alignments ENCSR998AJK ChIP-seq EFO:0002067 K562 cell line Homo sapiens NRF1-human ENCAB000BLK DNA False 2014-07-07 ENCODE 2 100 ENCFF002DPF, ENCFF002EFZ, ENCFF807MUK 5713790785 ENCODE Processing Pipeline e68bf6bb8dc11eaec7b792b46b8651bb https://www.encodeproject.org/files/ENCFF655PTL/@@download/ENCFF655PTL.bam hg19 released mild to moderate bottlenecking ENCFF883WVV bam unfiltered alignments ENCSR998AJK ChIP-seq EFO:0002067 K562 cell line Homo sapiens NRF1-human ENCAB000BLK DNA False 2014-07-07 ENCODE 1 100 ENCFF002DPA, ENCFF002EFX, ENCFF807MUK 5108310852 ENCODE Processing Pipeline 410f16fb0287372dd93be6489fe8681a https://www.encodeproject.org/files/ENCFF883WVV/@@download/ENCFF883WVV.bam hg19 released mild to moderate bottlenecking ENCFF405QFN bigWig signal p-value ENCSR998AJK ChIP-seq EFO:0002067 K562 cell line Homo sapiens NRF1-human ENCAB000BLK DNA False 2014-07-07 ENCODE 1, 2 ENCFF051LWI, ENCFF581ZJL, ENCFF615FDE, ENCFF986GTB 1539243380 ENCODE Processing Pipeline db9d49409bd68a574497318cdecf7a0b https://www.encodeproject.org/files/ENCFF405QFN/@@download/ENCFF405QFN.bigWig hg19 released mild to moderate bottlenecking ENCFF002DPA fastq reads ENCSR998AJK ChIP-seq EFO:0002067 K562 cell line Homo sapiens NRF1-human ENCAB000BLK DNA False 2014-07-07 ENCODE 1 1 100 paired-ended 1 ENCFF002EFX 2532879648 Michael Snyder, Stanford b4770ffe49382961d13fc002c7bb7f85 SRA:SRR5112381 https://www.encodeproject.org/files/ENCFF002DPA/@@download/ENCFF002DPA.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFF/ released mild to moderate bottlenecking ENCFF002DPF fastq reads ENCSR998AJK ChIP-seq EFO:0002067 K562 cell line Homo sapiens NRF1-human ENCAB000BLK DNA False 2014-07-07 ENCODE 2 1 100 paired-ended 2 ENCFF002EFZ 2864834526 Michael Snyder, Stanford 792c3680f9eb5e479c1987927e65f22e SRA:SRR5112382 https://www.encodeproject.org/files/ENCFF002DPF/@@download/ENCFF002DPF.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFA/ released mild to moderate bottlenecking ENCFF002EFX fastq reads ENCSR998AJK ChIP-seq EFO:0002067 K562 cell line Homo sapiens NRF1-human ENCAB000BLK DNA False 2014-07-07 ENCODE 1 1 100 paired-ended 2 ENCFF002DPA 2611936006 Michael Snyder, Stanford e7a35dff04c18e373eaef6e90d73d8db SRA:SRR5112381 https://www.encodeproject.org/files/ENCFF002EFX/@@download/ENCFF002EFX.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFH/ released mild to moderate bottlenecking ENCFF002EFZ fastq reads ENCSR998AJK ChIP-seq EFO:0002067 K562 cell line Homo sapiens NRF1-human ENCAB000BLK DNA False 2014-07-07 ENCODE 2 1 100 paired-ended 1 ENCFF002DPF 2799065029 Michael Snyder, Stanford 445cc7cbda8e80e9bbe5bfaeca1f709b SRA:SRR5112382 https://www.encodeproject.org/files/ENCFF002EFZ/@@download/ENCFF002EFZ.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFD/ released mild to moderate bottlenecking ENCFF966TQS bigWig fold change over control ENCSR998AJK ChIP-seq EFO:0002067 K562 cell line Homo sapiens NRF1-human ENCAB000BLK DNA False 2014-07-07 ENCODE 1, 2 ENCFF051LWI, ENCFF581ZJL, ENCFF615FDE, ENCFF986GTB 1954051218 ENCODE Processing Pipeline aac4b21ce79816a0b3451b924dc1c141 https://www.encodeproject.org/files/ENCFF966TQS/@@download/ENCFF966TQS.bigWig hg19 released mild to moderate bottlenecking ENCFF113EKC bed narrowPeak peaks ENCSR998AJK ChIP-seq EFO:0002067 K562 cell line Homo sapiens NRF1-human ENCAB000BLK DNA False 2014-07-07 ENCODE 1 ENCFF581ZJL, ENCFF615FDE 6766643 ENCODE Processing Pipeline 004b8c0ba595469c62a2df0a692f1732 https://www.encodeproject.org/files/ENCFF113EKC/@@download/ENCFF113EKC.bed.gz hg19 released mild to moderate bottlenecking ENCFF657EBT bigBed narrowPeak peaks ENCSR998AJK ChIP-seq EFO:0002067 K562 cell line Homo sapiens NRF1-human ENCAB000BLK DNA False 2014-07-07 ENCODE 1 ENCFF113EKC 13201688 ENCODE Processing Pipeline daa58adf05567ab1195667a2cbb307ec https://www.encodeproject.org/files/ENCFF657EBT/@@download/ENCFF657EBT.bigBed hg19 released mild to moderate bottlenecking ENCFF288BMB bed narrowPeak peaks ENCSR998AJK ChIP-seq EFO:0002067 K562 cell line Homo sapiens NRF1-human ENCAB000BLK DNA False 2014-07-07 ENCODE 2 ENCFF051LWI, ENCFF986GTB 6894601 ENCODE Processing Pipeline 3001eca0f6ac4c5cc4f2cb18927cab12 https://www.encodeproject.org/files/ENCFF288BMB/@@download/ENCFF288BMB.bed.gz hg19 released mild to moderate bottlenecking ENCFF406JKC bed narrowPeak peaks ENCSR998AJK ChIP-seq EFO:0002067 K562 cell line Homo sapiens NRF1-human ENCAB000BLK DNA False 2014-07-07 ENCODE 1, 2 ENCFF051LWI, ENCFF581ZJL, ENCFF615FDE, ENCFF986GTB 7143616 ENCODE Processing Pipeline b8def5f6e578dcf33f82a4d9ce98f8a0 https://www.encodeproject.org/files/ENCFF406JKC/@@download/ENCFF406JKC.bed.gz hg19 released mild to moderate bottlenecking ENCFF774YNB bigBed narrowPeak peaks ENCSR998AJK ChIP-seq EFO:0002067 K562 cell line Homo sapiens NRF1-human ENCAB000BLK DNA False 2014-07-07 ENCODE 2 ENCFF288BMB 13189179 ENCODE Processing Pipeline d2064f91840cf4683c14521f76e0377a https://www.encodeproject.org/files/ENCFF774YNB/@@download/ENCFF774YNB.bigBed hg19 released mild to moderate bottlenecking ENCFF816USM bigBed narrowPeak peaks ENCSR998AJK ChIP-seq EFO:0002067 K562 cell line Homo sapiens NRF1-human ENCAB000BLK DNA False 2014-07-07 ENCODE 1, 2 ENCFF406JKC 13041560 ENCODE Processing Pipeline d8d416cfb1f203dfc5bd933c84e6e8e5 https://www.encodeproject.org/files/ENCFF816USM/@@download/ENCFF816USM.bigBed hg19 released mild to moderate bottlenecking ENCFF836FKF bed narrowPeak conservative idr thresholded peaks ENCSR998AJK ChIP-seq EFO:0002067 K562 cell line Homo sapiens NRF1-human ENCAB000BLK DNA False 2014-07-07 ENCODE 1, 2 ENCFF001TDO, ENCFF113EKC, ENCFF288BMB, ENCFF406JKC 641086 ENCODE Processing Pipeline bd7288a70c296c891df464f23e50559e https://www.encodeproject.org/files/ENCFF836FKF/@@download/ENCFF836FKF.bed.gz hg19 released mild to moderate bottlenecking ENCFF616OKD bigBed narrowPeak conservative idr thresholded peaks ENCSR998AJK ChIP-seq EFO:0002067 K562 cell line Homo sapiens NRF1-human ENCAB000BLK DNA False 2014-07-07 ENCODE 1, 2 ENCFF836FKF 1159518 ENCODE Processing Pipeline 9ca4eec38c882b524327a0480428b935 https://www.encodeproject.org/files/ENCFF616OKD/@@download/ENCFF616OKD.bigBed hg19 released mild to moderate bottlenecking ENCFF493ABN bed narrowPeak optimal idr thresholded peaks ENCSR998AJK ChIP-seq EFO:0002067 K562 cell line Homo sapiens NRF1-human ENCAB000BLK DNA False 2014-07-07 ENCODE 1, 2 ENCFF001TDO, ENCFF113EKC, ENCFF288BMB, ENCFF406JKC 684973 ENCODE Processing Pipeline d5fff8c03ee7b8067da264cb490f4327 https://www.encodeproject.org/files/ENCFF493ABN/@@download/ENCFF493ABN.bed.gz hg19 released mild to moderate bottlenecking ENCFF563JEN bigBed narrowPeak optimal idr thresholded peaks ENCSR998AJK ChIP-seq EFO:0002067 K562 cell line Homo sapiens NRF1-human ENCAB000BLK DNA False 2014-07-07 ENCODE 1, 2 ENCFF493ABN 1230855 ENCODE Processing Pipeline 127d0c8b5729f2ff62f68c55f0fe12e5 https://www.encodeproject.org/files/ENCFF563JEN/@@download/ENCFF563JEN.bigBed hg19 released mild to moderate bottlenecking ENCFF986GTB bam alignments ENCSR998AJK ChIP-seq EFO:0002067 K562 cell line Homo sapiens NRF1-human ENCAB000BLK DNA False 2014-07-07 ENCODE 2 100 ENCFF002DPF, ENCFF002EFZ, ENCFF807MUK 4802295089 ENCODE Processing Pipeline eddb474b557c2506a936f5d7d9e21f8c https://www.encodeproject.org/files/ENCFF986GTB/@@download/ENCFF986GTB.bam hg19 released mild to moderate bottlenecking ENCFF615FDE bam alignments ENCSR998AJK ChIP-seq EFO:0002067 K562 cell line Homo sapiens NRF1-human ENCAB000BLK DNA False 2014-07-07 ENCODE 1 100 ENCFF002DPA, ENCFF002EFX, ENCFF807MUK 4393017795 ENCODE Processing Pipeline 5cc8856b1225ffc3318ae237ea0cdc30 https://www.encodeproject.org/files/ENCFF615FDE/@@download/ENCFF615FDE.bam hg19 released mild to moderate bottlenecking ENCFF036DUA bigWig signal p-value ENCSR998AJK ChIP-seq EFO:0002067 K562 cell line Homo sapiens NRF1-human ENCAB000BLK DNA False 2014-07-07 ENCODE 2 ENCFF051LWI, ENCFF986GTB 887136400 ENCODE Processing Pipeline 492419d6a8f0f8c30f95dde5a792d1b3 https://www.encodeproject.org/files/ENCFF036DUA/@@download/ENCFF036DUA.bigWig hg19 released mild to moderate bottlenecking ENCFF931KMU bigWig signal p-value ENCSR998AJK ChIP-seq EFO:0002067 K562 cell line Homo sapiens NRF1-human ENCAB000BLK DNA False 2014-07-07 ENCODE 1 ENCFF581ZJL, ENCFF615FDE 1020917327 ENCODE Processing Pipeline 0ddd30e299c0fab7d369f02981e02c19 https://www.encodeproject.org/files/ENCFF931KMU/@@download/ENCFF931KMU.bigWig hg19 released mild to moderate bottlenecking ENCFF713PLO bigWig signal p-value ENCSR998AJK ChIP-seq EFO:0002067 K562 cell line Homo sapiens NRF1-human ENCAB000BLK DNA False 2014-07-07 ENCODE 1, 2 ENCFF051LWI, ENCFF581ZJL, ENCFF615FDE, ENCFF986GTB 1537456036 ENCODE Processing Pipeline 82b6a29f7ce85486603d9e09c17b6e8f https://www.encodeproject.org/files/ENCFF713PLO/@@download/ENCFF713PLO.bigWig hg19 archived mild to moderate bottlenecking ENCFF744SAJ bigWig fold change over control ENCSR998AJK ChIP-seq EFO:0002067 K562 cell line Homo sapiens NRF1-human ENCAB000BLK DNA False 2014-07-07 ENCODE 1 ENCFF581ZJL, ENCFF615FDE 1033172151 ENCODE Processing Pipeline 1d1f0bc51423316d090add0ef6b0e5d9 https://www.encodeproject.org/files/ENCFF744SAJ/@@download/ENCFF744SAJ.bigWig hg19 released mild to moderate bottlenecking ENCFF897ZRQ bigWig fold change over control ENCSR998AJK ChIP-seq EFO:0002067 K562 cell line Homo sapiens NRF1-human ENCAB000BLK DNA False 2014-07-07 ENCODE 2 ENCFF051LWI, ENCFF986GTB 1114400258 ENCODE Processing Pipeline 17597962aea0d46139343e70228d8a05 https://www.encodeproject.org/files/ENCFF897ZRQ/@@download/ENCFF897ZRQ.bigWig hg19 released mild to moderate bottlenecking ENCFF328DWU bigWig fold change over control ENCSR998AJK ChIP-seq EFO:0002067 K562 cell line Homo sapiens NRF1-human ENCAB000BLK DNA False 2014-07-07 ENCODE 1, 2 ENCFF051LWI, ENCFF581ZJL, ENCFF615FDE, ENCFF986GTB 1945762963 ENCODE Processing Pipeline 48d7ef49cb6cbf52928ad44dba8b93c8 https://www.encodeproject.org/files/ENCFF328DWU/@@download/ENCFF328DWU.bigWig hg19 archived mild to moderate bottlenecking ENCFF295YFY bigBed narrowPeak peaks ENCSR998AJK ChIP-seq EFO:0002067 K562 cell line Homo sapiens NRF1-human ENCAB000BLK DNA False 2014-07-07 ENCODE 1, 2 ENCFF978MYZ 13044638 ENCODE Processing Pipeline 6429d345b35e82d271ae2f10dac7a434 https://www.encodeproject.org/files/ENCFF295YFY/@@download/ENCFF295YFY.bigBed hg19 archived mild to moderate bottlenecking ENCFF010NSU bigBed narrowPeak peaks ENCSR998AJK ChIP-seq EFO:0002067 K562 cell line Homo sapiens NRF1-human ENCAB000BLK DNA False 2014-07-07 ENCODE 1 ENCFF263SML 13203945 ENCODE Processing Pipeline 668bfb831e1548e541004e21a02d6be3 https://www.encodeproject.org/files/ENCFF010NSU/@@download/ENCFF010NSU.bigBed hg19 archived mild to moderate bottlenecking ENCFF219SON bigBed narrowPeak peaks ENCSR998AJK ChIP-seq EFO:0002067 K562 cell line Homo sapiens NRF1-human ENCAB000BLK DNA False 2014-07-07 ENCODE 2 ENCFF138RWJ 13191214 ENCODE Processing Pipeline e754ac876601d782cfdacdcde5c7ffb1 https://www.encodeproject.org/files/ENCFF219SON/@@download/ENCFF219SON.bigBed hg19 archived mild to moderate bottlenecking ENCFF138RWJ bed narrowPeak peaks ENCSR998AJK ChIP-seq EFO:0002067 K562 cell line Homo sapiens NRF1-human ENCAB000BLK DNA False 2014-07-07 ENCODE 2 ENCFF051LWI, ENCFF986GTB 6970449 ENCODE Processing Pipeline afd34a6b4a486fa0b6feb85b2992031d https://www.encodeproject.org/files/ENCFF138RWJ/@@download/ENCFF138RWJ.bed.gz hg19 archived mild to moderate bottlenecking ENCFF263SML bed narrowPeak peaks ENCSR998AJK ChIP-seq EFO:0002067 K562 cell line Homo sapiens NRF1-human ENCAB000BLK DNA False 2014-07-07 ENCODE 1 ENCFF581ZJL, ENCFF615FDE 6840897 ENCODE Processing Pipeline 3d9c51ef3db7280749befdb5d623ea1f https://www.encodeproject.org/files/ENCFF263SML/@@download/ENCFF263SML.bed.gz hg19 archived mild to moderate bottlenecking ENCFF978MYZ bed narrowPeak peaks ENCSR998AJK ChIP-seq EFO:0002067 K562 cell line Homo sapiens NRF1-human ENCAB000BLK DNA False 2014-07-07 ENCODE 1, 2 ENCFF051LWI, ENCFF581ZJL, ENCFF615FDE, ENCFF986GTB 7149174 ENCODE Processing Pipeline d608454c08c8de0f51d7972f7aca6387 https://www.encodeproject.org/files/ENCFF978MYZ/@@download/ENCFF978MYZ.bed.gz hg19 archived mild to moderate bottlenecking ENCFF564CXM bam alignments ENCSR998AJK ChIP-seq EFO:0002067 K562 cell line Homo sapiens NRF1-human ENCAB000BLK DNA False 2014-07-07 ENCODE 1 100 ENCFF002DPA, ENCFF002EFX, ENCFF643CGH 4394573976 ENCODE Processing Pipeline c6a3a7c490d60a8995709d5f9f9cc216 https://www.encodeproject.org/files/ENCFF564CXM/@@download/ENCFF564CXM.bam GRCh38 released mild to moderate bottlenecking ENCFF675LCH bam unfiltered alignments ENCSR998AJK ChIP-seq EFO:0002067 K562 cell line Homo sapiens NRF1-human ENCAB000BLK DNA False 2014-07-07 ENCODE 2 100 ENCFF002DPF, ENCFF002EFZ, ENCFF643CGH 5717512899 ENCODE Processing Pipeline 3e75ff9357191c1436b7476c0fd9c1b0 https://www.encodeproject.org/files/ENCFF675LCH/@@download/ENCFF675LCH.bam GRCh38 released mild to moderate bottlenecking ENCFF933GGT bam unfiltered alignments ENCSR998AJK ChIP-seq EFO:0002067 K562 cell line Homo sapiens NRF1-human ENCAB000BLK DNA False 2014-07-07 ENCODE 1 100 ENCFF002DPA, ENCFF002EFX, ENCFF643CGH 5110371038 ENCODE Processing Pipeline 3c8e01b7dc0fac1baaeb2948d02c1bcd https://www.encodeproject.org/files/ENCFF933GGT/@@download/ENCFF933GGT.bam GRCh38 released mild to moderate bottlenecking ENCFF722LJA bam alignments ENCSR998AJK ChIP-seq EFO:0002067 K562 cell line Homo sapiens NRF1-human ENCAB000BLK DNA False 2014-07-07 ENCODE 2 100 ENCFF002DPF, ENCFF002EFZ, ENCFF643CGH 4804881345 ENCODE Processing Pipeline 76270d2182112cd6a4950e4f0a68ba57 https://www.encodeproject.org/files/ENCFF722LJA/@@download/ENCFF722LJA.bam GRCh38 released mild to moderate bottlenecking ENCFF552SBR bed narrowPeak peaks ENCSR998AJK ChIP-seq EFO:0002067 K562 cell line Homo sapiens NRF1-human ENCAB000BLK DNA False 2014-07-07 ENCODE 2 ENCFF227IZS, ENCFF722LJA 6864653 ENCODE Processing Pipeline 96f2f1111693aeeb92783096181709ee https://www.encodeproject.org/files/ENCFF552SBR/@@download/ENCFF552SBR.bed.gz GRCh38 released mild to moderate bottlenecking ENCFF981BVY bigWig signal p-value ENCSR998AJK ChIP-seq EFO:0002067 K562 cell line Homo sapiens NRF1-human ENCAB000BLK DNA False 2014-07-07 ENCODE 2 ENCFF227IZS, ENCFF722LJA 884105844 ENCODE Processing Pipeline 0d033b996759ca7ca220fb5dccc5f700 https://www.encodeproject.org/files/ENCFF981BVY/@@download/ENCFF981BVY.bigWig GRCh38 released mild to moderate bottlenecking ENCFF271IWM bigWig fold change over control ENCSR998AJK ChIP-seq EFO:0002067 K562 cell line Homo sapiens NRF1-human ENCAB000BLK DNA False 2014-07-07 ENCODE 1, 2 ENCFF227IZS, ENCFF564CXM, ENCFF722LJA, ENCFF910IKB 1947371034 ENCODE Processing Pipeline aed94780b451eb15666de62c7a2e7356 https://www.encodeproject.org/files/ENCFF271IWM/@@download/ENCFF271IWM.bigWig GRCh38 released mild to moderate bottlenecking ENCFF911DQZ bigBed narrowPeak peaks ENCSR998AJK ChIP-seq EFO:0002067 K562 cell line Homo sapiens NRF1-human ENCAB000BLK DNA False 2014-07-07 ENCODE 1, 2 ENCFF490KOA 13056224 ENCODE Processing Pipeline 0db14ae35baf7c0e2502487de3254bc0 https://www.encodeproject.org/files/ENCFF911DQZ/@@download/ENCFF911DQZ.bigBed GRCh38 released mild to moderate bottlenecking ENCFF849QQG bigWig signal p-value ENCSR998AJK ChIP-seq EFO:0002067 K562 cell line Homo sapiens NRF1-human ENCAB000BLK DNA False 2014-07-07 ENCODE 1 ENCFF564CXM, ENCFF910IKB 904654726 ENCODE Processing Pipeline 82806a35b4ee30c8f32a2eabc9254047 https://www.encodeproject.org/files/ENCFF849QQG/@@download/ENCFF849QQG.bigWig GRCh38 released mild to moderate bottlenecking ENCFF385KDZ bigWig signal p-value ENCSR998AJK ChIP-seq EFO:0002067 K562 cell line Homo sapiens NRF1-human ENCAB000BLK DNA False 2014-07-07 ENCODE 1, 2 ENCFF227IZS, ENCFF564CXM, ENCFF722LJA, ENCFF910IKB 1563038334 ENCODE Processing Pipeline 17e7e8bfdf9055b842f19302a3256a0c https://www.encodeproject.org/files/ENCFF385KDZ/@@download/ENCFF385KDZ.bigWig GRCh38 released mild to moderate bottlenecking ENCFF098QAR bigWig fold change over control ENCSR998AJK ChIP-seq EFO:0002067 K562 cell line Homo sapiens NRF1-human ENCAB000BLK DNA False 2014-07-07 ENCODE 1 ENCFF564CXM, ENCFF910IKB 1040818879 ENCODE Processing Pipeline db17ce69b635a063970f914b98e53ec1 https://www.encodeproject.org/files/ENCFF098QAR/@@download/ENCFF098QAR.bigWig GRCh38 released mild to moderate bottlenecking ENCFF645UIM bigWig fold change over control ENCSR998AJK ChIP-seq EFO:0002067 K562 cell line Homo sapiens NRF1-human ENCAB000BLK DNA False 2014-07-07 ENCODE 2 ENCFF227IZS, ENCFF722LJA 1104407043 ENCODE Processing Pipeline 0a6ba4f828729f0853d1d3afd74917db https://www.encodeproject.org/files/ENCFF645UIM/@@download/ENCFF645UIM.bigWig GRCh38 released mild to moderate bottlenecking ENCFF387LCD bed narrowPeak peaks ENCSR998AJK ChIP-seq EFO:0002067 K562 cell line Homo sapiens NRF1-human ENCAB000BLK DNA False 2014-07-07 ENCODE 1 ENCFF564CXM, ENCFF910IKB 6797676 ENCODE Processing Pipeline 2d46b9d2ef30b56f84e6f55f6e502621 https://www.encodeproject.org/files/ENCFF387LCD/@@download/ENCFF387LCD.bed.gz GRCh38 released mild to moderate bottlenecking ENCFF490KOA bed narrowPeak peaks ENCSR998AJK ChIP-seq EFO:0002067 K562 cell line Homo sapiens NRF1-human ENCAB000BLK DNA False 2014-07-07 ENCODE 1, 2 ENCFF227IZS, ENCFF564CXM, ENCFF722LJA, ENCFF910IKB 7136563 ENCODE Processing Pipeline 9e5056eaec2bc0f5d6ab1761c2e65245 https://www.encodeproject.org/files/ENCFF490KOA/@@download/ENCFF490KOA.bed.gz GRCh38 released mild to moderate bottlenecking ENCFF701HLA bigBed narrowPeak peaks ENCSR998AJK ChIP-seq EFO:0002067 K562 cell line Homo sapiens NRF1-human ENCAB000BLK DNA False 2014-07-07 ENCODE 1 ENCFF387LCD 13283412 ENCODE Processing Pipeline bfb5e01ee6d8dbacca8910023e369e2e https://www.encodeproject.org/files/ENCFF701HLA/@@download/ENCFF701HLA.bigBed GRCh38 released mild to moderate bottlenecking ENCFF739EUG bigBed narrowPeak peaks ENCSR998AJK ChIP-seq EFO:0002067 K562 cell line Homo sapiens NRF1-human ENCAB000BLK DNA False 2014-07-07 ENCODE 2 ENCFF552SBR 13166460 ENCODE Processing Pipeline 75d47e85307ab92036b088be6e71b264 https://www.encodeproject.org/files/ENCFF739EUG/@@download/ENCFF739EUG.bigBed GRCh38 released mild to moderate bottlenecking ENCFF999GFD bigBed narrowPeak conservative idr thresholded peaks ENCSR998AJK ChIP-seq EFO:0002067 K562 cell line Homo sapiens NRF1-human ENCAB000BLK DNA False 2014-07-07 ENCODE 1, 2 ENCFF762NRN 1168229 ENCODE Processing Pipeline 0b2676741b9cbf81aac54c356d2b3065 https://www.encodeproject.org/files/ENCFF999GFD/@@download/ENCFF999GFD.bigBed GRCh38 released mild to moderate bottlenecking ENCFF782YFS bed narrowPeak optimal idr thresholded peaks ENCSR998AJK ChIP-seq EFO:0002067 K562 cell line Homo sapiens NRF1-human ENCAB000BLK DNA False 2014-07-07 ENCODE 1, 2 ENCFF387LCD, ENCFF419RSJ, ENCFF490KOA, ENCFF552SBR 684837 ENCODE Processing Pipeline f22788b5a3d64f0348e8aa61bf92085c https://www.encodeproject.org/files/ENCFF782YFS/@@download/ENCFF782YFS.bed.gz GRCh38 released mild to moderate bottlenecking ENCFF920TBG bigBed narrowPeak optimal idr thresholded peaks ENCSR998AJK ChIP-seq EFO:0002067 K562 cell line Homo sapiens NRF1-human ENCAB000BLK DNA False 2014-07-07 ENCODE 1, 2 ENCFF782YFS 1237209 ENCODE Processing Pipeline b086da3b3e4bdbf0c7458fac388058f9 https://www.encodeproject.org/files/ENCFF920TBG/@@download/ENCFF920TBG.bigBed GRCh38 released mild to moderate bottlenecking ENCFF762NRN bed narrowPeak conservative idr thresholded peaks ENCSR998AJK ChIP-seq EFO:0002067 K562 cell line Homo sapiens NRF1-human ENCAB000BLK DNA False 2014-07-07 ENCODE 1, 2 ENCFF387LCD, ENCFF419RSJ, ENCFF490KOA, ENCFF552SBR 643781 ENCODE Processing Pipeline 66af117f75856c31f1eef9c811eb6723 https://www.encodeproject.org/files/ENCFF762NRN/@@download/ENCFF762NRN.bed.gz GRCh38 released mild to moderate bottlenecking ENCFF002WSS bigBed narrowPeak conservative idr thresholded peaks ENCSR998AJK ChIP-seq EFO:0002067 K562 cell line Homo sapiens NRF1-human ENCAB000BLK DNA False 2014-07-07 ENCODE 1, 2 ENCFF905MTJ 1072846 ENCODE Processing Pipeline f25860c484757fba3ceedcf911a2237a https://www.encodeproject.org/files/ENCFF002WSS/@@download/ENCFF002WSS.bigBed hg19 archived mild to moderate bottlenecking ENCFF905MTJ bed narrowPeak conservative idr thresholded peaks ENCSR998AJK ChIP-seq EFO:0002067 K562 cell line Homo sapiens NRF1-human ENCAB000BLK DNA False 2014-07-07 ENCODE 1, 2 ENCFF001TDO, ENCFF138RWJ, ENCFF263SML, ENCFF978MYZ 566520 ENCODE Processing Pipeline 499de513bf3853402210c3ef992bde7c https://www.encodeproject.org/files/ENCFF905MTJ/@@download/ENCFF905MTJ.bed.gz hg19 archived mild to moderate bottlenecking ENCFF809MSQ bed narrowPeak optimal idr thresholded peaks ENCSR998AJK ChIP-seq EFO:0002067 K562 cell line Homo sapiens NRF1-human ENCAB000BLK DNA False 2014-07-07 ENCODE 1, 2 ENCFF001TDO, ENCFF138RWJ, ENCFF263SML, ENCFF978MYZ 603740 ENCODE Processing Pipeline c5c300d8c24705b1cf027b0ddc4468af https://www.encodeproject.org/files/ENCFF809MSQ/@@download/ENCFF809MSQ.bed.gz hg19 archived mild to moderate bottlenecking ENCFF985BIH bigBed narrowPeak optimal idr thresholded peaks ENCSR998AJK ChIP-seq EFO:0002067 K562 cell line Homo sapiens NRF1-human ENCAB000BLK DNA False 2014-07-07 ENCODE 1, 2 ENCFF809MSQ 1133380 ENCODE Processing Pipeline 1b81b4c96bf34df6a69b46d881180771 https://www.encodeproject.org/files/ENCFF985BIH/@@download/ENCFF985BIH.bigBed hg19 archived mild to moderate bottlenecking ENCFF397BDM bam unfiltered alignments ENCSR290MUH ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-GABPA-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 50 ENCFF346WZR, ENCFF807MUK, ENCFF861PLD 1472681486 ENCODE Processing Pipeline 07f0af64745206bd29146bbf15564e1f https://www.encodeproject.org/files/ENCFF397BDM/@@download/ENCFF397BDM.bam hg19 released missing genetic modification characterization, low read depth ENCFF490JJA bam unfiltered alignments ENCSR290MUH ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-GABPA-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 50 ENCFF385UYP, ENCFF701VYF, ENCFF807MUK 1112342006 ENCODE Processing Pipeline ed860907d8d3c018f1a331cf967120aa https://www.encodeproject.org/files/ENCFF490JJA/@@download/ENCFF490JJA.bam hg19 released missing genetic modification characterization, low read depth ENCFF861PLD fastq reads ENCSR290MUH ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-GABPA-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 1 50 single-ended 607958322 Kevin White, UChicago e6c6ff33627039bf1afe0ae77e8ff21d SRA:SRR6213040 https://www.encodeproject.org/files/ENCFF861PLD/@@download/ENCFF861PLD.fastq.gz Illumina HiSeq 2500 /files/ENCFF322SHV/, /files/ENCFF617CIJ/ released missing genetic modification characterization, low read depth ENCFF701VYF fastq reads ENCSR290MUH ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-GABPA-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 1 50 single-ended 485662832 Kevin White, UChicago 3343921a8545fe3b5acdc21f01f665e3 SRA:SRR6213038 https://www.encodeproject.org/files/ENCFF701VYF/@@download/ENCFF701VYF.fastq.gz Illumina HiSeq 2500 /files/ENCFF322SHV/, /files/ENCFF617CIJ/ released missing genetic modification characterization, low read depth ENCFF346WZR fastq reads ENCSR290MUH ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-GABPA-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 1 50 single-ended 874546037 Kevin White, UChicago 824c5d89047585c79c1d38b0571705e1 SRA:SRR6213041 https://www.encodeproject.org/files/ENCFF346WZR/@@download/ENCFF346WZR.fastq.gz Illumina HiSeq 2500 /files/ENCFF322SHV/, /files/ENCFF617CIJ/ released missing genetic modification characterization, low read depth ENCFF385UYP fastq reads ENCSR290MUH ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-GABPA-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 1 50 single-ended 627424950 Kevin White, UChicago bac2d8d750d2c2d775741d3412978ae9 SRA:SRR6213039 https://www.encodeproject.org/files/ENCFF385UYP/@@download/ENCFF385UYP.fastq.gz Illumina HiSeq 2500 /files/ENCFF322SHV/, /files/ENCFF617CIJ/ released missing genetic modification characterization, low read depth ENCFF772DPI bam alignments ENCSR290MUH ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-GABPA-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 50 ENCFF385UYP, ENCFF701VYF, ENCFF807MUK 755350368 ENCODE Processing Pipeline 7e9b48ac555fccc0af1482d50d5a0874 https://www.encodeproject.org/files/ENCFF772DPI/@@download/ENCFF772DPI.bam hg19 released missing genetic modification characterization, low read depth ENCFF009ZXV bam alignments ENCSR290MUH ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-GABPA-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 50 ENCFF346WZR, ENCFF807MUK, ENCFF861PLD 999698272 ENCODE Processing Pipeline 740ef3e38feb6b765f7e2ff53ec7963a https://www.encodeproject.org/files/ENCFF009ZXV/@@download/ENCFF009ZXV.bam hg19 released missing genetic modification characterization, low read depth ENCFF040UHG bigWig signal p-value ENCSR290MUH ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-GABPA-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF629YBN, ENCFF772DPI 554505596 ENCODE Processing Pipeline 7a23bc87a612012c40772b47cfb0c84b https://www.encodeproject.org/files/ENCFF040UHG/@@download/ENCFF040UHG.bigWig hg19 released missing genetic modification characterization, low read depth ENCFF438IMS bigWig fold change over control ENCSR290MUH ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-GABPA-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF629YBN, ENCFF772DPI 545874580 ENCODE Processing Pipeline 20e52d9b45ffd90d4eecbc77f943c8f5 https://www.encodeproject.org/files/ENCFF438IMS/@@download/ENCFF438IMS.bigWig hg19 released missing genetic modification characterization, low read depth ENCFF919ECJ bam unfiltered alignments ENCSR290MUH ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-GABPA-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 50 ENCFF346WZR, ENCFF643CGH, ENCFF861PLD 1476037887 ENCODE Processing Pipeline 8aa136da1bc057d9b7397b332b0cd58b https://www.encodeproject.org/files/ENCFF919ECJ/@@download/ENCFF919ECJ.bam GRCh38 released missing genetic modification characterization, low read depth ENCFF400MMA bam alignments ENCSR290MUH ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-GABPA-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 50 ENCFF346WZR, ENCFF643CGH, ENCFF861PLD 999006246 ENCODE Processing Pipeline 9efbc857178b845e3293df331f45d899 https://www.encodeproject.org/files/ENCFF400MMA/@@download/ENCFF400MMA.bam GRCh38 released missing genetic modification characterization, low read depth ENCFF244TJH bam unfiltered alignments ENCSR290MUH ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-GABPA-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 50 ENCFF385UYP, ENCFF643CGH, ENCFF701VYF 1114832159 ENCODE Processing Pipeline d331971d8c7bff4b55a706042b9035e1 https://www.encodeproject.org/files/ENCFF244TJH/@@download/ENCFF244TJH.bam GRCh38 released missing genetic modification characterization, low read depth ENCFF593XTM bam alignments ENCSR290MUH ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-GABPA-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 50 ENCFF385UYP, ENCFF643CGH, ENCFF701VYF 754779497 ENCODE Processing Pipeline 70e250bde64448af66e2880f386fed2e https://www.encodeproject.org/files/ENCFF593XTM/@@download/ENCFF593XTM.bam GRCh38 released missing genetic modification characterization, low read depth ENCFF637NDE bigWig signal p-value ENCSR290MUH ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-GABPA-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF159FKZ, ENCFF400MMA 564312272 ENCODE Processing Pipeline fe9d6be82dd9234930b6da0e3a6d6bce https://www.encodeproject.org/files/ENCFF637NDE/@@download/ENCFF637NDE.bigWig GRCh38 released missing genetic modification characterization, low read depth ENCFF627CZH bigWig signal p-value ENCSR290MUH ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-GABPA-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF159FKZ, ENCFF593XTM 656535376 ENCODE Processing Pipeline 6297d5c71e28912e855f605a8ed0f604 https://www.encodeproject.org/files/ENCFF627CZH/@@download/ENCFF627CZH.bigWig GRCh38 released missing genetic modification characterization, low read depth ENCFF370IQU bigWig signal p-value ENCSR290MUH ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-GABPA-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF159FKZ, ENCFF400MMA, ENCFF593XTM 866690764 ENCODE Processing Pipeline 3fbedbe2483e64d7d1db0a9d9438c15e https://www.encodeproject.org/files/ENCFF370IQU/@@download/ENCFF370IQU.bigWig GRCh38 released missing genetic modification characterization, low read depth ENCFF776NHK bigWig fold change over control ENCSR290MUH ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-GABPA-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF159FKZ, ENCFF400MMA 642266273 ENCODE Processing Pipeline 20f77d87450043e6ac2296089b8f5505 https://www.encodeproject.org/files/ENCFF776NHK/@@download/ENCFF776NHK.bigWig GRCh38 released missing genetic modification characterization, low read depth ENCFF347WTQ bigWig fold change over control ENCSR290MUH ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-GABPA-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF159FKZ, ENCFF593XTM 542813186 ENCODE Processing Pipeline 41c2c8e1e93eb32897ad1bc795c4ace8 https://www.encodeproject.org/files/ENCFF347WTQ/@@download/ENCFF347WTQ.bigWig GRCh38 released missing genetic modification characterization, low read depth ENCFF477SSU bigWig fold change over control ENCSR290MUH ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-GABPA-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF159FKZ, ENCFF400MMA, ENCFF593XTM 869528038 ENCODE Processing Pipeline 5aaef4ea7d2559bd971d8019c45bb859 https://www.encodeproject.org/files/ENCFF477SSU/@@download/ENCFF477SSU.bigWig GRCh38 released missing genetic modification characterization, low read depth ENCFF027OOJ bed narrowPeak peaks ENCSR290MUH ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-GABPA-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF159FKZ, ENCFF593XTM 6499408 ENCODE Processing Pipeline 6653b30f24293a674c28242dc5bc4615 https://www.encodeproject.org/files/ENCFF027OOJ/@@download/ENCFF027OOJ.bed.gz GRCh38 released missing genetic modification characterization, low read depth ENCFF119GNW bed narrowPeak peaks ENCSR290MUH ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-GABPA-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF159FKZ, ENCFF400MMA 6767109 ENCODE Processing Pipeline 49b75d9293f30a57900c15a39b0da469 https://www.encodeproject.org/files/ENCFF119GNW/@@download/ENCFF119GNW.bed.gz GRCh38 released missing genetic modification characterization, low read depth ENCFF326DWK bigBed narrowPeak peaks ENCSR290MUH ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-GABPA-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF119GNW 12755670 ENCODE Processing Pipeline 74a9312e4af6e378087b2ed150fe3a33 https://www.encodeproject.org/files/ENCFF326DWK/@@download/ENCFF326DWK.bigBed GRCh38 released missing genetic modification characterization, low read depth ENCFF806LNP bigBed narrowPeak conservative idr thresholded peaks ENCSR290MUH ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-GABPA-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF492VKT 1263234 ENCODE Processing Pipeline c13edc2d359e816c7c91d95d9c9695e9 https://www.encodeproject.org/files/ENCFF806LNP/@@download/ENCFF806LNP.bigBed GRCh38 released missing genetic modification characterization, low read depth ENCFF535BMV bed narrowPeak optimal idr thresholded peaks ENCSR290MUH ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-GABPA-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF027OOJ, ENCFF119GNW, ENCFF419RSJ, ENCFF832TTO 590995 ENCODE Processing Pipeline 262c811193da09ef8b05fb6bf75cc9be https://www.encodeproject.org/files/ENCFF535BMV/@@download/ENCFF535BMV.bed.gz GRCh38 released missing genetic modification characterization, low read depth ENCFF832TTO bed narrowPeak peaks ENCSR290MUH ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-GABPA-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF159FKZ, ENCFF400MMA, ENCFF593XTM 7041671 ENCODE Processing Pipeline 435a35a6cd32a8509331fab075986a9f https://www.encodeproject.org/files/ENCFF832TTO/@@download/ENCFF832TTO.bed.gz GRCh38 released missing genetic modification characterization, low read depth ENCFF492VKT bed narrowPeak conservative idr thresholded peaks ENCSR290MUH ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-GABPA-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF027OOJ, ENCFF119GNW, ENCFF419RSJ, ENCFF832TTO 587036 ENCODE Processing Pipeline db2eabb0435fc97dd4ebadab29267c27 https://www.encodeproject.org/files/ENCFF492VKT/@@download/ENCFF492VKT.bed.gz GRCh38 released missing genetic modification characterization, low read depth ENCFF679AGT bigBed narrowPeak optimal idr thresholded peaks ENCSR290MUH ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-GABPA-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF535BMV 1268433 ENCODE Processing Pipeline 336d1b8d8077a84d866636d98fe529ad https://www.encodeproject.org/files/ENCFF679AGT/@@download/ENCFF679AGT.bigBed GRCh38 released missing genetic modification characterization, low read depth ENCFF722PQU bigBed narrowPeak peaks ENCSR290MUH ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-GABPA-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF832TTO 12721103 ENCODE Processing Pipeline e964f10e139ba14d543f90740efbaffd https://www.encodeproject.org/files/ENCFF722PQU/@@download/ENCFF722PQU.bigBed GRCh38 released missing genetic modification characterization, low read depth ENCFF745GCH bigBed narrowPeak peaks ENCSR290MUH ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-GABPA-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF027OOJ 12829570 ENCODE Processing Pipeline 51e5d7fb28b2d908d8f6d6acafb69f59 https://www.encodeproject.org/files/ENCFF745GCH/@@download/ENCFF745GCH.bigBed GRCh38 released missing genetic modification characterization, low read depth ENCFF319VGK bigWig signal p-value ENCSR290MUH ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-GABPA-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF009ZXV, ENCFF629YBN 581216734 ENCODE Processing Pipeline 8426e9fbed7737a585aef3bb0f734cbd https://www.encodeproject.org/files/ENCFF319VGK/@@download/ENCFF319VGK.bigWig hg19 released missing genetic modification characterization, low read depth ENCFF450AAJ bigWig signal p-value ENCSR290MUH ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-GABPA-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF009ZXV, ENCFF629YBN, ENCFF772DPI 865167215 ENCODE Processing Pipeline 182c8e16fd91ee767338b2e5e593dd7d https://www.encodeproject.org/files/ENCFF450AAJ/@@download/ENCFF450AAJ.bigWig hg19 released missing genetic modification characterization, low read depth ENCFF244CNG bigWig fold change over control ENCSR290MUH ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-GABPA-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF009ZXV, ENCFF629YBN 653708602 ENCODE Processing Pipeline 1eea8a7ce1ef035d34006ad21da24ab8 https://www.encodeproject.org/files/ENCFF244CNG/@@download/ENCFF244CNG.bigWig hg19 released missing genetic modification characterization, low read depth ENCFF685KAG bed narrowPeak optimal idr thresholded peaks ENCSR290MUH ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-GABPA-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF001TDO, ENCFF026SKI, ENCFF835LBQ, ENCFF845TET 590608 ENCODE Processing Pipeline 2642e3d21c71e17716b79b0496bbf05b https://www.encodeproject.org/files/ENCFF685KAG/@@download/ENCFF685KAG.bed.gz hg19 released missing genetic modification characterization, low read depth ENCFF845TET bed narrowPeak peaks ENCSR290MUH ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-GABPA-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF009ZXV, ENCFF629YBN 6765258 ENCODE Processing Pipeline e7f259ed3066ecddb659b324d47541a4 https://www.encodeproject.org/files/ENCFF845TET/@@download/ENCFF845TET.bed.gz hg19 released missing genetic modification characterization, low read depth ENCFF026SKI bed narrowPeak peaks ENCSR290MUH ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-GABPA-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF629YBN, ENCFF772DPI 6500124 ENCODE Processing Pipeline e9deff36e8ad4de02867558a33ef1222 https://www.encodeproject.org/files/ENCFF026SKI/@@download/ENCFF026SKI.bed.gz hg19 released missing genetic modification characterization, low read depth ENCFF835LBQ bed narrowPeak peaks ENCSR290MUH ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-GABPA-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF009ZXV, ENCFF629YBN, ENCFF772DPI 7040983 ENCODE Processing Pipeline 0660ffc5d585df2a9dae9ae59d22e30d https://www.encodeproject.org/files/ENCFF835LBQ/@@download/ENCFF835LBQ.bed.gz hg19 released missing genetic modification characterization, low read depth ENCFF483HNX bigBed narrowPeak conservative idr thresholded peaks ENCSR290MUH ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-GABPA-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF427YBA 1260122 ENCODE Processing Pipeline b5a6014065c6de844ac2da75f805b82a https://www.encodeproject.org/files/ENCFF483HNX/@@download/ENCFF483HNX.bigBed hg19 released missing genetic modification characterization, low read depth ENCFF251JYQ bigBed narrowPeak optimal idr thresholded peaks ENCSR290MUH ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-GABPA-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF685KAG 1266213 ENCODE Processing Pipeline e204feca910aa1852a2219742ad0c81d https://www.encodeproject.org/files/ENCFF251JYQ/@@download/ENCFF251JYQ.bigBed hg19 released missing genetic modification characterization, low read depth ENCFF915JOK bigWig fold change over control ENCSR290MUH ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-GABPA-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF009ZXV, ENCFF629YBN, ENCFF772DPI 866621093 ENCODE Processing Pipeline e757c0d8df5b0f8656f79ae40845d20f https://www.encodeproject.org/files/ENCFF915JOK/@@download/ENCFF915JOK.bigWig hg19 released missing genetic modification characterization, low read depth ENCFF575SLA bigBed narrowPeak peaks ENCSR290MUH ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-GABPA-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1 ENCFF845TET 12749304 ENCODE Processing Pipeline b7c866035583c189d17f5827a51a8408 https://www.encodeproject.org/files/ENCFF575SLA/@@download/ENCFF575SLA.bigBed hg19 released missing genetic modification characterization, low read depth ENCFF868QMY bigBed narrowPeak peaks ENCSR290MUH ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-GABPA-human ENCAB728YTO DNA False 2016-06-13 ENCODE 2 ENCFF026SKI 12823981 ENCODE Processing Pipeline 61a48fecd445f3f567de14772c2c4eed https://www.encodeproject.org/files/ENCFF868QMY/@@download/ENCFF868QMY.bigBed hg19 released missing genetic modification characterization, low read depth ENCFF427YBA bed narrowPeak conservative idr thresholded peaks ENCSR290MUH ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-GABPA-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF001TDO, ENCFF026SKI, ENCFF835LBQ, ENCFF845TET 586872 ENCODE Processing Pipeline c7604f39f8cc2afd5107ead2064eeb57 https://www.encodeproject.org/files/ENCFF427YBA/@@download/ENCFF427YBA.bed.gz hg19 released missing genetic modification characterization, low read depth ENCFF878BRL bigBed narrowPeak peaks ENCSR290MUH ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-GABPA-human ENCAB728YTO DNA False 2016-06-13 ENCODE 1, 2 ENCFF835LBQ 12714417 ENCODE Processing Pipeline 1494186b5b7da2a1227db503fb188fae https://www.encodeproject.org/files/ENCFF878BRL/@@download/ENCFF878BRL.bigBed hg19 released missing genetic modification characterization, low read depth ENCFF992LWJ bam unfiltered alignments ENCSR075HTM ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC2-human ENCAB170GTK DNA False 2016-10-31 ENCODE 2 100 ENCFF741IHV, ENCFF807MUK, ENCFF990UUV 4739265639 ENCODE Processing Pipeline be5c5c2cfcb7af799c69df03c1794c0b https://www.encodeproject.org/files/ENCFF992LWJ/@@download/ENCFF992LWJ.bam hg19 released mild to moderate bottlenecking ENCFF583SMB bam unfiltered alignments ENCSR075HTM ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC2-human ENCAB170GTK DNA False 2016-10-31 ENCODE 1 100 ENCFF362ZRF, ENCFF807MUK, ENCFF896IZU 4470423045 ENCODE Processing Pipeline 611f1de807fa4a17097318244203eade https://www.encodeproject.org/files/ENCFF583SMB/@@download/ENCFF583SMB.bam hg19 released mild to moderate bottlenecking ENCFF896IZU fastq reads ENCSR075HTM ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC2-human ENCAB170GTK DNA False 2016-10-31 ENCODE 1 1 100 paired-ended 2 ENCFF362ZRF 2123478734 Michael Snyder, Stanford 5bc727a0909b4e1710f1ab315146cb89 SRA:SRR5111049 https://www.encodeproject.org/files/ENCFF896IZU/@@download/ENCFF896IZU.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFH/ released mild to moderate bottlenecking ENCFF362ZRF fastq reads ENCSR075HTM ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC2-human ENCAB170GTK DNA False 2016-10-31 ENCODE 1 1 100 paired-ended 1 ENCFF896IZU 2068740629 Michael Snyder, Stanford e1e5b5b81af1afc9aaee4dd1098b7553 SRA:SRR5111049 https://www.encodeproject.org/files/ENCFF362ZRF/@@download/ENCFF362ZRF.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFF/ released mild to moderate bottlenecking ENCFF990UUV fastq reads ENCSR075HTM ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC2-human ENCAB170GTK DNA False 2016-10-31 ENCODE 2 1 100 paired-ended 1 ENCFF741IHV 2169215444 Michael Snyder, Stanford 0c0f9b02f1aea6f7b50dc7a87b10b866 SRA:SRR5111050 https://www.encodeproject.org/files/ENCFF990UUV/@@download/ENCFF990UUV.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFD/ released mild to moderate bottlenecking ENCFF741IHV fastq reads ENCSR075HTM ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC2-human ENCAB170GTK DNA False 2016-10-31 ENCODE 2 1 100 paired-ended 2 ENCFF990UUV 2226535597 Michael Snyder, Stanford 5661a0cd97efbd89bf15824f9a598ba4 SRA:SRR5111050 https://www.encodeproject.org/files/ENCFF741IHV/@@download/ENCFF741IHV.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFA/ released mild to moderate bottlenecking ENCFF406KFP bam alignments ENCSR075HTM ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC2-human ENCAB170GTK DNA False 2016-10-31 ENCODE 1 100 ENCFF362ZRF, ENCFF807MUK, ENCFF896IZU 3650813528 ENCODE Processing Pipeline 75b38415cf457fdc256bc482a1a20320 https://www.encodeproject.org/files/ENCFF406KFP/@@download/ENCFF406KFP.bam hg19 released mild to moderate bottlenecking ENCFF686HTQ bam alignments ENCSR075HTM ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC2-human ENCAB170GTK DNA False 2016-10-31 ENCODE 2 100 ENCFF741IHV, ENCFF807MUK, ENCFF990UUV 3856474863 ENCODE Processing Pipeline d3245fce83609e50866db5fb1dcdd367 https://www.encodeproject.org/files/ENCFF686HTQ/@@download/ENCFF686HTQ.bam hg19 released mild to moderate bottlenecking ENCFF747BDB bigWig signal p-value ENCSR075HTM ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC2-human ENCAB170GTK DNA False 2016-10-31 ENCODE 1 ENCFF406KFP, ENCFF581ZJL 939024405 ENCODE Processing Pipeline b7db7e8fb3f39f14ca406dfd8f86cdc9 https://www.encodeproject.org/files/ENCFF747BDB/@@download/ENCFF747BDB.bigWig hg19 released mild to moderate bottlenecking ENCFF531JPY bigWig signal p-value ENCSR075HTM ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC2-human ENCAB170GTK DNA False 2016-10-31 ENCODE 2 ENCFF051LWI, ENCFF686HTQ 945255577 ENCODE Processing Pipeline f1039f7c2ad6bd4df5946792772cd70c https://www.encodeproject.org/files/ENCFF531JPY/@@download/ENCFF531JPY.bigWig hg19 released mild to moderate bottlenecking ENCFF089KXL bigWig fold change over control ENCSR075HTM ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC2-human ENCAB170GTK DNA False 2016-10-31 ENCODE 2 ENCFF051LWI, ENCFF686HTQ 1104488362 ENCODE Processing Pipeline b8923ebdffa2c79c15ee238742a5b895 https://www.encodeproject.org/files/ENCFF089KXL/@@download/ENCFF089KXL.bigWig hg19 released mild to moderate bottlenecking ENCFF892TRP bigWig signal p-value ENCSR075HTM ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC2-human ENCAB170GTK DNA False 2016-10-31 ENCODE 1, 2 ENCFF051LWI, ENCFF406KFP, ENCFF581ZJL, ENCFF686HTQ 1925121414 ENCODE Processing Pipeline 4a0e86ab7f2ac866689e0c54d1d0cc97 https://www.encodeproject.org/files/ENCFF892TRP/@@download/ENCFF892TRP.bigWig hg19 released mild to moderate bottlenecking ENCFF851MMQ bigWig fold change over control ENCSR075HTM ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC2-human ENCAB170GTK DNA False 2016-10-31 ENCODE 1 ENCFF406KFP, ENCFF581ZJL 1071545987 ENCODE Processing Pipeline cfa5c2ca3af2bcd5cb63620f781e66a5 https://www.encodeproject.org/files/ENCFF851MMQ/@@download/ENCFF851MMQ.bigWig hg19 released mild to moderate bottlenecking ENCFF697WDH bigWig fold change over control ENCSR075HTM ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC2-human ENCAB170GTK DNA False 2016-10-31 ENCODE 1, 2 ENCFF051LWI, ENCFF406KFP, ENCFF581ZJL, ENCFF686HTQ 1984986367 ENCODE Processing Pipeline 487f62e41c5d4f99611fb77f5754162d https://www.encodeproject.org/files/ENCFF697WDH/@@download/ENCFF697WDH.bigWig hg19 released mild to moderate bottlenecking ENCFF074FFL bed narrowPeak peaks ENCSR075HTM ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC2-human ENCAB170GTK DNA False 2016-10-31 ENCODE 1, 2 ENCFF051LWI, ENCFF406KFP, ENCFF581ZJL, ENCFF686HTQ 7065052 ENCODE Processing Pipeline 1e856749a0963af3924232f5d1184597 https://www.encodeproject.org/files/ENCFF074FFL/@@download/ENCFF074FFL.bed.gz hg19 released mild to moderate bottlenecking ENCFF888AZU bed narrowPeak peaks ENCSR075HTM ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC2-human ENCAB170GTK DNA False 2016-10-31 ENCODE 1 ENCFF406KFP, ENCFF581ZJL 6893480 ENCODE Processing Pipeline aa22323020872da6f25c0326969b9c18 https://www.encodeproject.org/files/ENCFF888AZU/@@download/ENCFF888AZU.bed.gz hg19 released mild to moderate bottlenecking ENCFF810MGC bed narrowPeak peaks ENCSR075HTM ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC2-human ENCAB170GTK DNA False 2016-10-31 ENCODE 2 ENCFF051LWI, ENCFF686HTQ 6915987 ENCODE Processing Pipeline a3c8fdc3ddfd955a8ff0e3dc31180d4d https://www.encodeproject.org/files/ENCFF810MGC/@@download/ENCFF810MGC.bed.gz hg19 released mild to moderate bottlenecking ENCFF992ZGT bigBed narrowPeak peaks ENCSR075HTM ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC2-human ENCAB170GTK DNA False 2016-10-31 ENCODE 2 ENCFF810MGC 12862830 ENCODE Processing Pipeline 4fabb94f1f80c552a68512713da8f5a7 https://www.encodeproject.org/files/ENCFF992ZGT/@@download/ENCFF992ZGT.bigBed hg19 released mild to moderate bottlenecking ENCFF562JDH bed narrowPeak optimal idr thresholded peaks ENCSR075HTM ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC2-human ENCAB170GTK DNA False 2016-10-31 ENCODE 1, 2 ENCFF001TDO, ENCFF074FFL, ENCFF810MGC, ENCFF888AZU 563260 ENCODE Processing Pipeline cc91f30f2f516fcd7c689ded645811d5 https://www.encodeproject.org/files/ENCFF562JDH/@@download/ENCFF562JDH.bed.gz hg19 released mild to moderate bottlenecking ENCFF472RUJ bigBed narrowPeak peaks ENCSR075HTM ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC2-human ENCAB170GTK DNA False 2016-10-31 ENCODE 1 ENCFF888AZU 12580804 ENCODE Processing Pipeline 90dad6c34676c17909c6ed0d4f870024 https://www.encodeproject.org/files/ENCFF472RUJ/@@download/ENCFF472RUJ.bigBed hg19 released mild to moderate bottlenecking ENCFF434IHH bigBed narrowPeak conservative idr thresholded peaks ENCSR075HTM ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC2-human ENCAB170GTK DNA False 2016-10-31 ENCODE 1, 2 ENCFF631IAC 801733 ENCODE Processing Pipeline 3954212ec65d2206c7ddab35c10b264a https://www.encodeproject.org/files/ENCFF434IHH/@@download/ENCFF434IHH.bigBed hg19 released mild to moderate bottlenecking ENCFF987QGI bigBed narrowPeak peaks ENCSR075HTM ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC2-human ENCAB170GTK DNA False 2016-10-31 ENCODE 1, 2 ENCFF074FFL 12457622 ENCODE Processing Pipeline 3d5fcfe146959ddb1fe23133d750a997 https://www.encodeproject.org/files/ENCFF987QGI/@@download/ENCFF987QGI.bigBed hg19 released mild to moderate bottlenecking ENCFF631IAC bed narrowPeak conservative idr thresholded peaks ENCSR075HTM ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC2-human ENCAB170GTK DNA False 2016-10-31 ENCODE 1, 2 ENCFF001TDO, ENCFF074FFL, ENCFF810MGC, ENCFF888AZU 405112 ENCODE Processing Pipeline 22a606470a5877124d50fd35f51ee691 https://www.encodeproject.org/files/ENCFF631IAC/@@download/ENCFF631IAC.bed.gz hg19 released mild to moderate bottlenecking ENCFF271DVA bigBed narrowPeak optimal idr thresholded peaks ENCSR075HTM ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC2-human ENCAB170GTK DNA False 2016-10-31 ENCODE 1, 2 ENCFF562JDH 1029205 ENCODE Processing Pipeline 4d71ecb5d5b326bc4ce2d41107fbcab3 https://www.encodeproject.org/files/ENCFF271DVA/@@download/ENCFF271DVA.bigBed hg19 released mild to moderate bottlenecking ENCFF876AWI bam unfiltered alignments ENCSR075HTM ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC2-human ENCAB170GTK DNA False 2016-10-31 ENCODE 2 100 ENCFF643CGH, ENCFF741IHV, ENCFF990UUV 4742804562 ENCODE Processing Pipeline 02f53dc2bb758a184f914be66d24f717 https://www.encodeproject.org/files/ENCFF876AWI/@@download/ENCFF876AWI.bam GRCh38 released mild to moderate bottlenecking ENCFF203LSM bam unfiltered alignments ENCSR075HTM ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC2-human ENCAB170GTK DNA False 2016-10-31 ENCODE 1 100 ENCFF362ZRF, ENCFF643CGH, ENCFF896IZU 4473290822 ENCODE Processing Pipeline ae33723943922f870a99eb133938c6a5 https://www.encodeproject.org/files/ENCFF203LSM/@@download/ENCFF203LSM.bam GRCh38 released mild to moderate bottlenecking ENCFF408BKE bam alignments ENCSR075HTM ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC2-human ENCAB170GTK DNA False 2016-10-31 ENCODE 1 100 ENCFF362ZRF, ENCFF643CGH, ENCFF896IZU 3652522465 ENCODE Processing Pipeline 6b2dedc892417ef98297cfda5aef7894 https://www.encodeproject.org/files/ENCFF408BKE/@@download/ENCFF408BKE.bam GRCh38 released mild to moderate bottlenecking ENCFF497GOO bam alignments ENCSR075HTM ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC2-human ENCAB170GTK DNA False 2016-10-31 ENCODE 2 100 ENCFF643CGH, ENCFF741IHV, ENCFF990UUV 3858486275 ENCODE Processing Pipeline a75600648109539fee7f9c63943801d3 https://www.encodeproject.org/files/ENCFF497GOO/@@download/ENCFF497GOO.bam GRCh38 released mild to moderate bottlenecking ENCFF226PJM bigWig signal p-value ENCSR075HTM ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC2-human ENCAB170GTK DNA False 2016-10-31 ENCODE 1 ENCFF408BKE, ENCFF910IKB 1024895026 ENCODE Processing Pipeline c8ab0074d7bdbd845c64917bac9826fe https://www.encodeproject.org/files/ENCFF226PJM/@@download/ENCFF226PJM.bigWig GRCh38 released mild to moderate bottlenecking ENCFF266OBR bigWig signal p-value ENCSR075HTM ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC2-human ENCAB170GTK DNA False 2016-10-31 ENCODE 2 ENCFF227IZS, ENCFF497GOO 1106942876 ENCODE Processing Pipeline 4e7fa8d84a83bde4a1fa99a81033f30c https://www.encodeproject.org/files/ENCFF266OBR/@@download/ENCFF266OBR.bigWig GRCh38 released mild to moderate bottlenecking ENCFF443FFA bigWig signal p-value ENCSR075HTM ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC2-human ENCAB170GTK DNA False 2016-10-31 ENCODE 1, 2 ENCFF227IZS, ENCFF408BKE, ENCFF497GOO, ENCFF910IKB 2007659149 ENCODE Processing Pipeline 3151bc89b99b5578092a613382208920 https://www.encodeproject.org/files/ENCFF443FFA/@@download/ENCFF443FFA.bigWig GRCh38 released mild to moderate bottlenecking ENCFF567MTR bigWig fold change over control ENCSR075HTM ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC2-human ENCAB170GTK DNA False 2016-10-31 ENCODE 1 ENCFF408BKE, ENCFF910IKB 1072927734 ENCODE Processing Pipeline 735add18aeafdd5b360a972a001c7d43 https://www.encodeproject.org/files/ENCFF567MTR/@@download/ENCFF567MTR.bigWig GRCh38 released mild to moderate bottlenecking ENCFF979PUM bigWig fold change over control ENCSR075HTM ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC2-human ENCAB170GTK DNA False 2016-10-31 ENCODE 2 ENCFF227IZS, ENCFF497GOO 1098652613 ENCODE Processing Pipeline 98b70920f7c5f4eb6e7da385bc9a5ee8 https://www.encodeproject.org/files/ENCFF979PUM/@@download/ENCFF979PUM.bigWig GRCh38 released mild to moderate bottlenecking ENCFF088GRY bigWig fold change over control ENCSR075HTM ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC2-human ENCAB170GTK DNA False 2016-10-31 ENCODE 1, 2 ENCFF227IZS, ENCFF408BKE, ENCFF497GOO, ENCFF910IKB 1995924899 ENCODE Processing Pipeline 6a461530bbed7cf12540c38f06032e34 https://www.encodeproject.org/files/ENCFF088GRY/@@download/ENCFF088GRY.bigWig GRCh38 released mild to moderate bottlenecking ENCFF448UGC bed narrowPeak peaks ENCSR075HTM ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC2-human ENCAB170GTK DNA False 2016-10-31 ENCODE 1 ENCFF408BKE, ENCFF910IKB 6937384 ENCODE Processing Pipeline 8d7198842a1abe38f33967945463a336 https://www.encodeproject.org/files/ENCFF448UGC/@@download/ENCFF448UGC.bed.gz GRCh38 released mild to moderate bottlenecking ENCFF999UMW bed narrowPeak peaks ENCSR075HTM ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC2-human ENCAB170GTK DNA False 2016-10-31 ENCODE 2 ENCFF227IZS, ENCFF497GOO 6857449 ENCODE Processing Pipeline f31689d7850c5ab8fe50560f2aae4de4 https://www.encodeproject.org/files/ENCFF999UMW/@@download/ENCFF999UMW.bed.gz GRCh38 released mild to moderate bottlenecking ENCFF971JMJ bigBed narrowPeak peaks ENCSR075HTM ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC2-human ENCAB170GTK DNA False 2016-10-31 ENCODE 1 ENCFF448UGC 12701441 ENCODE Processing Pipeline 3e267b484dddf923c3acf17225d35f2d https://www.encodeproject.org/files/ENCFF971JMJ/@@download/ENCFF971JMJ.bigBed GRCh38 released mild to moderate bottlenecking ENCFF735PXM bed narrowPeak peaks ENCSR075HTM ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC2-human ENCAB170GTK DNA False 2016-10-31 ENCODE 1, 2 ENCFF227IZS, ENCFF408BKE, ENCFF497GOO, ENCFF910IKB 7064525 ENCODE Processing Pipeline 9dc258f89fc7c332df95b2f3e14fe41c https://www.encodeproject.org/files/ENCFF735PXM/@@download/ENCFF735PXM.bed.gz GRCh38 released mild to moderate bottlenecking ENCFF355GEL bigBed narrowPeak peaks ENCSR075HTM ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC2-human ENCAB170GTK DNA False 2016-10-31 ENCODE 2 ENCFF999UMW 12926106 ENCODE Processing Pipeline 5e58313b71f682ca4314cd28f99dd6fc https://www.encodeproject.org/files/ENCFF355GEL/@@download/ENCFF355GEL.bigBed GRCh38 released mild to moderate bottlenecking ENCFF694UZS bigBed narrowPeak peaks ENCSR075HTM ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC2-human ENCAB170GTK DNA False 2016-10-31 ENCODE 1, 2 ENCFF735PXM 12463510 ENCODE Processing Pipeline 16f825f05ac5b2d22ed30d99c10bd275 https://www.encodeproject.org/files/ENCFF694UZS/@@download/ENCFF694UZS.bigBed GRCh38 released mild to moderate bottlenecking ENCFF672AGD bed narrowPeak conservative idr thresholded peaks ENCSR075HTM ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC2-human ENCAB170GTK DNA False 2016-10-31 ENCODE 1, 2 ENCFF419RSJ, ENCFF448UGC, ENCFF735PXM, ENCFF999UMW 399564 ENCODE Processing Pipeline e3390556316cb513ab9a4eca8f0f5191 https://www.encodeproject.org/files/ENCFF672AGD/@@download/ENCFF672AGD.bed.gz GRCh38 released mild to moderate bottlenecking ENCFF507QZQ bigBed narrowPeak conservative idr thresholded peaks ENCSR075HTM ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC2-human ENCAB170GTK DNA False 2016-10-31 ENCODE 1, 2 ENCFF672AGD 795257 ENCODE Processing Pipeline f051c4dcf51e938ce769955162c18b92 https://www.encodeproject.org/files/ENCFF507QZQ/@@download/ENCFF507QZQ.bigBed GRCh38 released mild to moderate bottlenecking ENCFF618YRQ bed narrowPeak optimal idr thresholded peaks ENCSR075HTM ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC2-human ENCAB170GTK DNA False 2016-10-31 ENCODE 1, 2 ENCFF419RSJ, ENCFF448UGC, ENCFF735PXM, ENCFF999UMW 559567 ENCODE Processing Pipeline 4874fe372a32dd38b068561e6343a8b0 https://www.encodeproject.org/files/ENCFF618YRQ/@@download/ENCFF618YRQ.bed.gz GRCh38 released mild to moderate bottlenecking ENCFF471IPA bigBed narrowPeak optimal idr thresholded peaks ENCSR075HTM ChIP-seq EFO:0002067 K562 cell line Homo sapiens HDAC2-human ENCAB170GTK DNA False 2016-10-31 ENCODE 1, 2 ENCFF618YRQ 1025738 ENCODE Processing Pipeline abcf9f7a6c6282d4f883d3985ce319f1 https://www.encodeproject.org/files/ENCFF471IPA/@@download/ENCFF471IPA.bigBed GRCh38 released mild to moderate bottlenecking ENCFF886RND bam unfiltered alignments ENCSR587OQL ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCA4-human ENCAB039LJW DNA False 2016-06-14 ENCODE 2 100 ENCFF310JLM, ENCFF670FTR, ENCFF807MUK 5480734683 ENCODE Processing Pipeline 7cbd3ebf8922f3a71acf421350970dda https://www.encodeproject.org/files/ENCFF886RND/@@download/ENCFF886RND.bam hg19 released ENCFF594IAQ bam unfiltered alignments ENCSR587OQL ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCA4-human ENCAB039LJW DNA False 2016-06-14 ENCODE 1 100 ENCFF444MWP, ENCFF793GYQ, ENCFF807MUK 4327124767 ENCODE Processing Pipeline 0b8bb628d4c3f0007bce1984ce547751 https://www.encodeproject.org/files/ENCFF594IAQ/@@download/ENCFF594IAQ.bam hg19 released ENCFF444MWP fastq reads ENCSR587OQL ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCA4-human ENCAB039LJW DNA False 2016-06-14 ENCODE 1 1 100 paired-ended 2 ENCFF793GYQ 2056308832 Michael Snyder, Stanford 3460af208d9ea7dc2e20d83be6568c55 SRA:SRR5111824 https://www.encodeproject.org/files/ENCFF444MWP/@@download/ENCFF444MWP.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFH/ released ENCFF793GYQ fastq reads ENCSR587OQL ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCA4-human ENCAB039LJW DNA False 2016-06-14 ENCODE 1 1 100 paired-ended 1 ENCFF444MWP 2012078674 Michael Snyder, Stanford ce1d9665a2961c95b391bbf2c56c4d44 SRA:SRR5111824 https://www.encodeproject.org/files/ENCFF793GYQ/@@download/ENCFF793GYQ.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFF/ released ENCFF310JLM fastq reads ENCSR587OQL ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCA4-human ENCAB039LJW DNA False 2016-06-14 ENCODE 2 1 100 paired-ended 1 ENCFF670FTR 2525503627 Michael Snyder, Stanford 06d1e913b59c7dc6c5409a271227c205 SRA:SRR5111823 https://www.encodeproject.org/files/ENCFF310JLM/@@download/ENCFF310JLM.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFD/ released ENCFF670FTR fastq reads ENCSR587OQL ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCA4-human ENCAB039LJW DNA False 2016-06-14 ENCODE 2 1 100 paired-ended 2 ENCFF310JLM 2567340075 Michael Snyder, Stanford 81d71e817186094654e54d668eeb1a2d SRA:SRR5111823 https://www.encodeproject.org/files/ENCFF670FTR/@@download/ENCFF670FTR.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFA/ released ENCFF620XKU bam alignments ENCSR587OQL ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCA4-human ENCAB039LJW DNA False 2016-06-14 ENCODE 2 100 ENCFF310JLM, ENCFF670FTR, ENCFF807MUK 4677992197 ENCODE Processing Pipeline 8f9a227ce782a30192d7d2f3b95b4618 https://www.encodeproject.org/files/ENCFF620XKU/@@download/ENCFF620XKU.bam hg19 released ENCFF676EUR bam alignments ENCSR587OQL ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCA4-human ENCAB039LJW DNA False 2016-06-14 ENCODE 1 100 ENCFF444MWP, ENCFF793GYQ, ENCFF807MUK 3573168723 ENCODE Processing Pipeline 2bf8ad7ca019beb129d1f774f03044ef https://www.encodeproject.org/files/ENCFF676EUR/@@download/ENCFF676EUR.bam hg19 released ENCFF220ZHN bigWig signal p-value ENCSR587OQL ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCA4-human ENCAB039LJW DNA False 2016-06-14 ENCODE 1, 2 ENCFF051LWI, ENCFF581ZJL, ENCFF620XKU, ENCFF676EUR 1656341898 ENCODE Processing Pipeline da2a222f480106321604b70ae7b3397a https://www.encodeproject.org/files/ENCFF220ZHN/@@download/ENCFF220ZHN.bigWig hg19 released ENCFF748JPG bigWig fold change over control ENCSR587OQL ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCA4-human ENCAB039LJW DNA False 2016-06-14 ENCODE 1, 2 ENCFF051LWI, ENCFF581ZJL, ENCFF620XKU, ENCFF676EUR 2059217437 ENCODE Processing Pipeline 8887112c5ea009678a91dd0f25afa80b https://www.encodeproject.org/files/ENCFF748JPG/@@download/ENCFF748JPG.bigWig hg19 released ENCFF286YAW bam unfiltered alignments ENCSR587OQL ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCA4-human ENCAB039LJW DNA False 2016-06-14 ENCODE 1 100 ENCFF444MWP, ENCFF643CGH, ENCFF793GYQ 4330051606 ENCODE Processing Pipeline 3d8638ffbee928fa31b900078d610deb https://www.encodeproject.org/files/ENCFF286YAW/@@download/ENCFF286YAW.bam GRCh38 released ENCFF936WLL bam unfiltered alignments ENCSR587OQL ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCA4-human ENCAB039LJW DNA False 2016-06-14 ENCODE 2 100 ENCFF310JLM, ENCFF643CGH, ENCFF670FTR 5485134888 ENCODE Processing Pipeline 45f4f32f0575c465bb34c505e6673044 https://www.encodeproject.org/files/ENCFF936WLL/@@download/ENCFF936WLL.bam GRCh38 released ENCFF350FCE bam alignments ENCSR587OQL ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCA4-human ENCAB039LJW DNA False 2016-06-14 ENCODE 1 100 ENCFF444MWP, ENCFF643CGH, ENCFF793GYQ 3574860575 ENCODE Processing Pipeline 121823fa155c51433f0af9d15ca3db89 https://www.encodeproject.org/files/ENCFF350FCE/@@download/ENCFF350FCE.bam GRCh38 released ENCFF744TCZ bam alignments ENCSR587OQL ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCA4-human ENCAB039LJW DNA False 2016-06-14 ENCODE 2 100 ENCFF310JLM, ENCFF643CGH, ENCFF670FTR 4680689869 ENCODE Processing Pipeline f85e9ee671c58d74bf83425fd2668a08 https://www.encodeproject.org/files/ENCFF744TCZ/@@download/ENCFF744TCZ.bam GRCh38 released ENCFF739DYQ bigWig signal p-value ENCSR587OQL ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCA4-human ENCAB039LJW DNA False 2016-06-14 ENCODE 1 ENCFF350FCE, ENCFF910IKB 1139830681 ENCODE Processing Pipeline 719506dbf6fa35183090fda3518b9d3c https://www.encodeproject.org/files/ENCFF739DYQ/@@download/ENCFF739DYQ.bigWig GRCh38 released ENCFF533AHV bigWig signal p-value ENCSR587OQL ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCA4-human ENCAB039LJW DNA False 2016-06-14 ENCODE 2 ENCFF227IZS, ENCFF744TCZ 1066980471 ENCODE Processing Pipeline 19e72be5aabd4926d70b2d9b06a402b2 https://www.encodeproject.org/files/ENCFF533AHV/@@download/ENCFF533AHV.bigWig GRCh38 released ENCFF260JRT bigWig signal p-value ENCSR587OQL ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCA4-human ENCAB039LJW DNA False 2016-06-14 ENCODE 1, 2 ENCFF227IZS, ENCFF350FCE, ENCFF744TCZ, ENCFF910IKB 1691960416 ENCODE Processing Pipeline 475e22db0803082f49c3b8822331e087 https://www.encodeproject.org/files/ENCFF260JRT/@@download/ENCFF260JRT.bigWig GRCh38 released ENCFF621PSE bigWig fold change over control ENCSR587OQL ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCA4-human ENCAB039LJW DNA False 2016-06-14 ENCODE 1 ENCFF350FCE, ENCFF910IKB 1060262234 ENCODE Processing Pipeline 873446524ea14ea70c858a1999a15cf1 https://www.encodeproject.org/files/ENCFF621PSE/@@download/ENCFF621PSE.bigWig GRCh38 released ENCFF112ERN bigWig fold change over control ENCSR587OQL ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCA4-human ENCAB039LJW DNA False 2016-06-14 ENCODE 2 ENCFF227IZS, ENCFF744TCZ 1166971631 ENCODE Processing Pipeline 566639dd69955bbcfef882b9c3d7fd8b https://www.encodeproject.org/files/ENCFF112ERN/@@download/ENCFF112ERN.bigWig GRCh38 released ENCFF118DJE bigWig fold change over control ENCSR587OQL ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCA4-human ENCAB039LJW DNA False 2016-06-14 ENCODE 1, 2 ENCFF227IZS, ENCFF350FCE, ENCFF744TCZ, ENCFF910IKB 2059829337 ENCODE Processing Pipeline 3fc2d88c415a19313427d760c5973c33 https://www.encodeproject.org/files/ENCFF118DJE/@@download/ENCFF118DJE.bigWig GRCh38 released ENCFF908VVI bed narrowPeak peaks ENCSR587OQL ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCA4-human ENCAB039LJW DNA False 2016-06-14 ENCODE 1 ENCFF350FCE, ENCFF910IKB 7006298 ENCODE Processing Pipeline d314d08440081fb1b73adc5a24b84d80 https://www.encodeproject.org/files/ENCFF908VVI/@@download/ENCFF908VVI.bed.gz GRCh38 released ENCFF045ANV bed narrowPeak peaks ENCSR587OQL ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCA4-human ENCAB039LJW DNA False 2016-06-14 ENCODE 2 ENCFF227IZS, ENCFF744TCZ 7062210 ENCODE Processing Pipeline d347a190a73f6fb5b2224a64bb9720d3 https://www.encodeproject.org/files/ENCFF045ANV/@@download/ENCFF045ANV.bed.gz GRCh38 released ENCFF680GSE bed narrowPeak peaks ENCSR587OQL ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCA4-human ENCAB039LJW DNA False 2016-06-14 ENCODE 1, 2 ENCFF227IZS, ENCFF350FCE, ENCFF744TCZ, ENCFF910IKB 7172777 ENCODE Processing Pipeline 1b367799eb3963396e96b274e06ebf21 https://www.encodeproject.org/files/ENCFF680GSE/@@download/ENCFF680GSE.bed.gz GRCh38 released ENCFF873BHG bigBed narrowPeak peaks ENCSR587OQL ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCA4-human ENCAB039LJW DNA False 2016-06-14 ENCODE 1 ENCFF908VVI 12814340 ENCODE Processing Pipeline 6310d4c79d713c55e6fea35bddfdd254 https://www.encodeproject.org/files/ENCFF873BHG/@@download/ENCFF873BHG.bigBed GRCh38 released ENCFF764PGG bigBed narrowPeak peaks ENCSR587OQL ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCA4-human ENCAB039LJW DNA False 2016-06-14 ENCODE 2 ENCFF045ANV 12979767 ENCODE Processing Pipeline d1258c814f46c7ec39117dcae5103d25 https://www.encodeproject.org/files/ENCFF764PGG/@@download/ENCFF764PGG.bigBed GRCh38 released ENCFF739TBM bigBed narrowPeak peaks ENCSR587OQL ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCA4-human ENCAB039LJW DNA False 2016-06-14 ENCODE 1, 2 ENCFF680GSE 12773182 ENCODE Processing Pipeline 5e7fe17cda664e78b362381baf80c8ac https://www.encodeproject.org/files/ENCFF739TBM/@@download/ENCFF739TBM.bigBed GRCh38 released ENCFF333IXA bed narrowPeak conservative idr thresholded peaks ENCSR587OQL ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCA4-human ENCAB039LJW DNA False 2016-06-14 ENCODE 1, 2 ENCFF045ANV, ENCFF419RSJ, ENCFF680GSE, ENCFF908VVI 542406 ENCODE Processing Pipeline 3a3930a6bff606bc1bac5b4bfdbcc13b https://www.encodeproject.org/files/ENCFF333IXA/@@download/ENCFF333IXA.bed.gz GRCh38 released ENCFF683SUK bigBed narrowPeak conservative idr thresholded peaks ENCSR587OQL ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCA4-human ENCAB039LJW DNA False 2016-06-14 ENCODE 1, 2 ENCFF333IXA 1075087 ENCODE Processing Pipeline dea01bfa1fa28a5fdb7e0d2410c78c53 https://www.encodeproject.org/files/ENCFF683SUK/@@download/ENCFF683SUK.bigBed GRCh38 released ENCFF868UOJ bed narrowPeak optimal idr thresholded peaks ENCSR587OQL ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCA4-human ENCAB039LJW DNA False 2016-06-14 ENCODE 1, 2 ENCFF045ANV, ENCFF419RSJ, ENCFF680GSE, ENCFF908VVI 721619 ENCODE Processing Pipeline 63d768a026e5098724274b19f13558e2 https://www.encodeproject.org/files/ENCFF868UOJ/@@download/ENCFF868UOJ.bed.gz GRCh38 released ENCFF971PID bigBed narrowPeak optimal idr thresholded peaks ENCSR587OQL ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCA4-human ENCAB039LJW DNA False 2016-06-14 ENCODE 1, 2 ENCFF868UOJ 1339734 ENCODE Processing Pipeline 9588ab7775ca04017b0f0c1eced5b746 https://www.encodeproject.org/files/ENCFF971PID/@@download/ENCFF971PID.bigBed GRCh38 released ENCFF840RLL bigWig fold change over control ENCSR587OQL ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCA4-human ENCAB039LJW DNA False 2016-06-14 ENCODE 1 ENCFF581ZJL, ENCFF676EUR 1029700001 ENCODE Processing Pipeline c35f2959062473f121eb898e69e187dd https://www.encodeproject.org/files/ENCFF840RLL/@@download/ENCFF840RLL.bigWig hg19 released ENCFF399WUT bigWig signal p-value ENCSR587OQL ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCA4-human ENCAB039LJW DNA False 2016-06-14 ENCODE 2 ENCFF051LWI, ENCFF620XKU 1009338209 ENCODE Processing Pipeline 78d3a3bddb1179c9208b114cabab6d39 https://www.encodeproject.org/files/ENCFF399WUT/@@download/ENCFF399WUT.bigWig hg19 released ENCFF883TOD bed narrowPeak optimal idr thresholded peaks ENCSR587OQL ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCA4-human ENCAB039LJW DNA False 2016-06-14 ENCODE 1, 2 ENCFF001TDO, ENCFF513IHI, ENCFF541RTC, ENCFF891UIQ 747434 ENCODE Processing Pipeline cec784262d95b72f7a8d5f021ea99398 https://www.encodeproject.org/files/ENCFF883TOD/@@download/ENCFF883TOD.bed.gz hg19 released ENCFF485CTB bigWig signal p-value ENCSR587OQL ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCA4-human ENCAB039LJW DNA False 2016-06-14 ENCODE 1 ENCFF581ZJL, ENCFF676EUR 990418018 ENCODE Processing Pipeline 1a45ba8bf8142026e845dc59ecb99d7a https://www.encodeproject.org/files/ENCFF485CTB/@@download/ENCFF485CTB.bigWig hg19 released ENCFF541RTC bed narrowPeak peaks ENCSR587OQL ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCA4-human ENCAB039LJW DNA False 2016-06-14 ENCODE 2 ENCFF051LWI, ENCFF620XKU 7097716 ENCODE Processing Pipeline e6c25db4b623fa7b1eff41e9a7ac6536 https://www.encodeproject.org/files/ENCFF541RTC/@@download/ENCFF541RTC.bed.gz hg19 released ENCFF494DHW bigBed narrowPeak peaks ENCSR587OQL ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCA4-human ENCAB039LJW DNA False 2016-06-14 ENCODE 2 ENCFF541RTC 13011328 ENCODE Processing Pipeline e05d1dde37d9412f5c8e229395d2dd7c https://www.encodeproject.org/files/ENCFF494DHW/@@download/ENCFF494DHW.bigBed hg19 released ENCFF998ZQU bigBed narrowPeak optimal idr thresholded peaks ENCSR587OQL ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCA4-human ENCAB039LJW DNA False 2016-06-14 ENCODE 1, 2 ENCFF883TOD 1708315 ENCODE Processing Pipeline 81a8e5743040c6564a9868ff6b7303a5 https://www.encodeproject.org/files/ENCFF998ZQU/@@download/ENCFF998ZQU.bigBed hg19 released ENCFF908VAG bigWig fold change over control ENCSR587OQL ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCA4-human ENCAB039LJW DNA False 2016-06-14 ENCODE 2 ENCFF051LWI, ENCFF620XKU 1165198740 ENCODE Processing Pipeline 8f53809bfe0cf9c5f03fb0eebd0835ef https://www.encodeproject.org/files/ENCFF908VAG/@@download/ENCFF908VAG.bigWig hg19 released ENCFF513IHI bed narrowPeak peaks ENCSR587OQL ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCA4-human ENCAB039LJW DNA False 2016-06-14 ENCODE 1, 2 ENCFF051LWI, ENCFF581ZJL, ENCFF620XKU, ENCFF676EUR 7276138 ENCODE Processing Pipeline 832048d93b84753e18b2f10067363414 https://www.encodeproject.org/files/ENCFF513IHI/@@download/ENCFF513IHI.bed.gz hg19 released ENCFF611XRP bigBed narrowPeak peaks ENCSR587OQL ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCA4-human ENCAB039LJW DNA False 2016-06-14 ENCODE 1 ENCFF891UIQ 12905971 ENCODE Processing Pipeline f18aed1b8aeb65cf20f0fad50b84c28d https://www.encodeproject.org/files/ENCFF611XRP/@@download/ENCFF611XRP.bigBed hg19 released ENCFF339AII bigBed narrowPeak conservative idr thresholded peaks ENCSR587OQL ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCA4-human ENCAB039LJW DNA False 2016-06-14 ENCODE 1, 2 ENCFF670PUR 1117752 ENCODE Processing Pipeline 2f37fb79218441125d08d4a585036444 https://www.encodeproject.org/files/ENCFF339AII/@@download/ENCFF339AII.bigBed hg19 released ENCFF891UIQ bed narrowPeak peaks ENCSR587OQL ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCA4-human ENCAB039LJW DNA False 2016-06-14 ENCODE 1 ENCFF581ZJL, ENCFF676EUR 7092260 ENCODE Processing Pipeline a67287c32c3af5831e07a97dd0c47456 https://www.encodeproject.org/files/ENCFF891UIQ/@@download/ENCFF891UIQ.bed.gz hg19 released ENCFF100HYW bigBed narrowPeak peaks ENCSR587OQL ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCA4-human ENCAB039LJW DNA False 2016-06-14 ENCODE 1, 2 ENCFF513IHI 12877578 ENCODE Processing Pipeline 0a9636ac2e79b5f730708cc8c23265b4 https://www.encodeproject.org/files/ENCFF100HYW/@@download/ENCFF100HYW.bigBed hg19 released ENCFF670PUR bed narrowPeak conservative idr thresholded peaks ENCSR587OQL ChIP-seq EFO:0002067 K562 cell line Homo sapiens SMARCA4-human ENCAB039LJW DNA False 2016-06-14 ENCODE 1, 2 ENCFF001TDO, ENCFF513IHI, ENCFF541RTC, ENCFF891UIQ 573419 ENCODE Processing Pipeline 3ce2a16d13243c553c7ed86b72868a8f https://www.encodeproject.org/files/ENCFF670PUR/@@download/ENCFF670PUR.bed.gz hg19 released ENCFF324OEM fastq reads ENCSR718SDE ChIP-seq EFO:0002067 K562 cell line Homo sapiens RLF-human ENCAB069FYQ DNA False 2018-01-26 ENCODE 3 1 100 paired-ended 2 ENCFF812LUV 1969348231 Michael Snyder, Stanford 42cb319ce6f3de73b696a5d3acbdc1e4 https://www.encodeproject.org/files/ENCFF324OEM/@@download/ENCFF324OEM.fastq.gz Illumina HiSeq 2000 /files/ENCFF608MDV/ released low read depth experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF812LUV fastq reads ENCSR718SDE ChIP-seq EFO:0002067 K562 cell line Homo sapiens RLF-human ENCAB069FYQ DNA False 2018-01-26 ENCODE 3 1 100 paired-ended 1 ENCFF324OEM 1959997078 Michael Snyder, Stanford 7162caf7da872b8e9b976a797dd737a1 https://www.encodeproject.org/files/ENCFF812LUV/@@download/ENCFF812LUV.fastq.gz Illumina HiSeq 2000 /files/ENCFF240DTE/ released low read depth experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF765ZNI fastq reads ENCSR718SDE ChIP-seq EFO:0002067 K562 cell line Homo sapiens RLF-human ENCAB069FYQ DNA False 2018-01-26 ENCODE 2 1 100 paired-ended 2 ENCFF640JQI 2373019691 Michael Snyder, Stanford aec0e1932e230401b35ca913f83121c4 https://www.encodeproject.org/files/ENCFF765ZNI/@@download/ENCFF765ZNI.fastq.gz Illumina HiSeq 2000 /files/ENCFF368UOC/ released low read depth experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF640JQI fastq reads ENCSR718SDE ChIP-seq EFO:0002067 K562 cell line Homo sapiens RLF-human ENCAB069FYQ DNA False 2018-01-26 ENCODE 2 1 100 paired-ended 1 ENCFF765ZNI 2321704429 Michael Snyder, Stanford 98d86ffaf15b00fc6f42b548818a45e2 https://www.encodeproject.org/files/ENCFF640JQI/@@download/ENCFF640JQI.fastq.gz Illumina HiSeq 2000 /files/ENCFF410PHD/ released low read depth experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF859ZVB bam unfiltered alignments ENCSR718SDE ChIP-seq EFO:0002067 K562 cell line Homo sapiens RLF-human ENCAB069FYQ DNA False 2018-01-26 ENCODE 3 100 ENCFF324OEM, ENCFF807MUK, ENCFF812LUV 4389478835 ENCODE Processing Pipeline 3d2b38a3d923a4458c813dd31782d1b9 https://www.encodeproject.org/files/ENCFF859ZVB/@@download/ENCFF859ZVB.bam hg19 released low read depth experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF026NYG bam unfiltered alignments ENCSR718SDE ChIP-seq EFO:0002067 K562 cell line Homo sapiens RLF-human ENCAB069FYQ DNA False 2018-01-26 ENCODE 3 100 ENCFF324OEM, ENCFF643CGH, ENCFF812LUV 4395047316 ENCODE Processing Pipeline 77e6bda522219924ee5f147970b18782 https://www.encodeproject.org/files/ENCFF026NYG/@@download/ENCFF026NYG.bam GRCh38 released low read depth experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF960MHY bam unfiltered alignments ENCSR718SDE ChIP-seq EFO:0002067 K562 cell line Homo sapiens RLF-human ENCAB069FYQ DNA False 2018-01-26 ENCODE 2 100 ENCFF640JQI, ENCFF765ZNI, ENCFF807MUK 5096593987 ENCODE Processing Pipeline 22461715e34faeabb562a4855bb5a6df https://www.encodeproject.org/files/ENCFF960MHY/@@download/ENCFF960MHY.bam hg19 released low read depth experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF025AZR bam unfiltered alignments ENCSR718SDE ChIP-seq EFO:0002067 K562 cell line Homo sapiens RLF-human ENCAB069FYQ DNA False 2018-01-26 ENCODE 2 100 ENCFF640JQI, ENCFF643CGH, ENCFF765ZNI 5101918224 ENCODE Processing Pipeline c1b61afac0a144bb28dcb77a152c61f4 https://www.encodeproject.org/files/ENCFF025AZR/@@download/ENCFF025AZR.bam GRCh38 released low read depth experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF243VKO bam alignments ENCSR718SDE ChIP-seq EFO:0002067 K562 cell line Homo sapiens RLF-human ENCAB069FYQ DNA False 2018-01-26 ENCODE 3 100 ENCFF324OEM, ENCFF807MUK, ENCFF812LUV 3714472856 ENCODE Processing Pipeline 3a0ca5302007a4bf91f53075ec774020 https://www.encodeproject.org/files/ENCFF243VKO/@@download/ENCFF243VKO.bam hg19 released low read depth experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF317PBJ bam alignments ENCSR718SDE ChIP-seq EFO:0002067 K562 cell line Homo sapiens RLF-human ENCAB069FYQ DNA False 2018-01-26 ENCODE 2 100 ENCFF640JQI, ENCFF643CGH, ENCFF765ZNI 4308941769 ENCODE Processing Pipeline 94873754e4d6a7d150d948ef64729668 https://www.encodeproject.org/files/ENCFF317PBJ/@@download/ENCFF317PBJ.bam GRCh38 released low read depth experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF562COY bam alignments ENCSR718SDE ChIP-seq EFO:0002067 K562 cell line Homo sapiens RLF-human ENCAB069FYQ DNA False 2018-01-26 ENCODE 2 100 ENCFF640JQI, ENCFF765ZNI, ENCFF807MUK 4307263026 ENCODE Processing Pipeline dc48cd119b6e6cb168a0cb2c24c29302 https://www.encodeproject.org/files/ENCFF562COY/@@download/ENCFF562COY.bam hg19 released low read depth experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF852XUO bam alignments ENCSR718SDE ChIP-seq EFO:0002067 K562 cell line Homo sapiens RLF-human ENCAB069FYQ DNA False 2018-01-26 ENCODE 3 100 ENCFF324OEM, ENCFF643CGH, ENCFF812LUV 3717188272 ENCODE Processing Pipeline 5775be8dd782d88b7884faa229dcab0a https://www.encodeproject.org/files/ENCFF852XUO/@@download/ENCFF852XUO.bam GRCh38 released low read depth experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF388WRK bigWig signal p-value ENCSR718SDE ChIP-seq EFO:0002067 K562 cell line Homo sapiens RLF-human ENCAB069FYQ DNA False 2018-01-26 ENCODE 3 ENCFF243VKO, ENCFF262CJE, ENCFF506DFV 1239279378 ENCODE Processing Pipeline 3d394768cc046cc80b5ad42d74af2eae https://www.encodeproject.org/files/ENCFF388WRK/@@download/ENCFF388WRK.bigWig hg19 released low read depth experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF209HKW bed narrowPeak optimal idr thresholded peaks ENCSR718SDE ChIP-seq EFO:0002067 K562 cell line Homo sapiens RLF-human ENCAB069FYQ DNA False 2018-01-26 ENCODE 2, 3 ENCFF001TDO, ENCFF085CGF, ENCFF563QBT, ENCFF772ITA 200581 ENCODE Processing Pipeline 0715e48bb3bd6c77a51ee4cda8cb0a97 https://www.encodeproject.org/files/ENCFF209HKW/@@download/ENCFF209HKW.bed.gz hg19 released low read depth experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF852VBR bigBed narrowPeak optimal idr thresholded peaks ENCSR718SDE ChIP-seq EFO:0002067 K562 cell line Homo sapiens RLF-human ENCAB069FYQ DNA False 2018-01-26 ENCODE 2, 3 ENCFF209HKW 454964 ENCODE Processing Pipeline 04614f5bd68f4f4e791faa146f2f2059 https://www.encodeproject.org/files/ENCFF852VBR/@@download/ENCFF852VBR.bigBed hg19 released low read depth experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF524TSA bigWig signal p-value ENCSR718SDE ChIP-seq EFO:0002067 K562 cell line Homo sapiens RLF-human ENCAB069FYQ DNA False 2018-01-26 ENCODE 3 ENCFF852XUO 1238997483 ENCODE Processing Pipeline 319874002684b0acc220fcc67bd3fd50 https://www.encodeproject.org/files/ENCFF524TSA/@@download/ENCFF524TSA.bigWig GRCh38 released low read depth experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF048ASH bed narrowPeak peaks ENCSR718SDE ChIP-seq EFO:0002067 K562 cell line Homo sapiens RLF-human ENCAB069FYQ DNA False 2018-01-26 ENCODE 2 ENCFF317PBJ 6842492 ENCODE Processing Pipeline 985a3edd4aeed2081a91af8539e0aff1 https://www.encodeproject.org/files/ENCFF048ASH/@@download/ENCFF048ASH.bed.gz GRCh38 released low read depth experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF048ZIT bigWig signal p-value ENCSR718SDE ChIP-seq EFO:0002067 K562 cell line Homo sapiens RLF-human ENCAB069FYQ DNA False 2018-01-26 ENCODE 2 ENCFF262CJE, ENCFF506DFV, ENCFF562COY 1197393968 ENCODE Processing Pipeline d1175d14c72d82d76614f777ca6cb227 https://www.encodeproject.org/files/ENCFF048ZIT/@@download/ENCFF048ZIT.bigWig hg19 released low read depth experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF373XUB bigWig fold change over control ENCSR718SDE ChIP-seq EFO:0002067 K562 cell line Homo sapiens RLF-human ENCAB069FYQ DNA False 2018-01-26 ENCODE 2, 3 ENCFF243VKO, ENCFF262CJE, ENCFF506DFV, ENCFF562COY 1861387606 ENCODE Processing Pipeline b7715fe19ccd5d4d40b52d6fefa8336f https://www.encodeproject.org/files/ENCFF373XUB/@@download/ENCFF373XUB.bigWig hg19 released low read depth experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF821SDW bigWig fold change over control ENCSR718SDE ChIP-seq EFO:0002067 K562 cell line Homo sapiens RLF-human ENCAB069FYQ DNA False 2018-01-26 ENCODE 3 ENCFF852XUO 1267830806 ENCODE Processing Pipeline 839d835de5cb1aed20ad3069f41e2fc6 https://www.encodeproject.org/files/ENCFF821SDW/@@download/ENCFF821SDW.bigWig GRCh38 released low read depth experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF976UUE bed narrowPeak peaks ENCSR718SDE ChIP-seq EFO:0002067 K562 cell line Homo sapiens RLF-human ENCAB069FYQ DNA False 2018-01-26 ENCODE 2, 3 ENCFF317PBJ, ENCFF852XUO 7083233 ENCODE Processing Pipeline 21667cd9183e7ebbc818b534bfcb9af1 https://www.encodeproject.org/files/ENCFF976UUE/@@download/ENCFF976UUE.bed.gz GRCh38 released low read depth experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF228DVH bigBed narrowPeak peaks ENCSR718SDE ChIP-seq EFO:0002067 K562 cell line Homo sapiens RLF-human ENCAB069FYQ DNA False 2018-01-26 ENCODE 2 ENCFF048ASH 13277774 ENCODE Processing Pipeline d82e9c4f188de042596ae46033d3c4cd https://www.encodeproject.org/files/ENCFF228DVH/@@download/ENCFF228DVH.bigBed GRCh38 released low read depth experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF698PCI bigWig fold change over control ENCSR718SDE ChIP-seq EFO:0002067 K562 cell line Homo sapiens RLF-human ENCAB069FYQ DNA False 2018-01-26 ENCODE 2 ENCFF262CJE, ENCFF506DFV, ENCFF562COY 1405432638 ENCODE Processing Pipeline 81022169854d41a1938c4094a70ba81a https://www.encodeproject.org/files/ENCFF698PCI/@@download/ENCFF698PCI.bigWig hg19 released low read depth experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF559YJW bigWig signal p-value ENCSR718SDE ChIP-seq EFO:0002067 K562 cell line Homo sapiens RLF-human ENCAB069FYQ DNA False 2018-01-26 ENCODE 2, 3 ENCFF243VKO, ENCFF262CJE, ENCFF506DFV, ENCFF562COY 1543262154 ENCODE Processing Pipeline bad9e79fe6ae843cca354bf6496e6cb2 https://www.encodeproject.org/files/ENCFF559YJW/@@download/ENCFF559YJW.bigWig hg19 released low read depth experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF333HNM bigWig fold change over control ENCSR718SDE ChIP-seq EFO:0002067 K562 cell line Homo sapiens RLF-human ENCAB069FYQ DNA False 2018-01-26 ENCODE 3 ENCFF243VKO, ENCFF262CJE, ENCFF506DFV 1245419358 ENCODE Processing Pipeline 0c2f931b514251286006b15750df655f https://www.encodeproject.org/files/ENCFF333HNM/@@download/ENCFF333HNM.bigWig hg19 released low read depth experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF772ITA bed narrowPeak peaks ENCSR718SDE ChIP-seq EFO:0002067 K562 cell line Homo sapiens RLF-human ENCAB069FYQ DNA False 2018-01-26 ENCODE 3 ENCFF243VKO, ENCFF262CJE, ENCFF506DFV 6227217 ENCODE Processing Pipeline d5e541a6a74160a9dbfcdfbe1098c02e https://www.encodeproject.org/files/ENCFF772ITA/@@download/ENCFF772ITA.bed.gz hg19 released low read depth experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF085CGF bed narrowPeak peaks ENCSR718SDE ChIP-seq EFO:0002067 K562 cell line Homo sapiens RLF-human ENCAB069FYQ DNA False 2018-01-26 ENCODE 2, 3 ENCFF243VKO, ENCFF262CJE, ENCFF506DFV, ENCFF562COY 7088043 ENCODE Processing Pipeline 9cbc7912f0cebe94ebd9e4e99407290e https://www.encodeproject.org/files/ENCFF085CGF/@@download/ENCFF085CGF.bed.gz hg19 released low read depth experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF224SUU bigBed narrowPeak conservative idr thresholded peaks ENCSR718SDE ChIP-seq EFO:0002067 K562 cell line Homo sapiens RLF-human ENCAB069FYQ DNA False 2018-01-26 ENCODE 2, 3 ENCFF569QYK 289207 ENCODE Processing Pipeline b52339447872fd823e2bc4f7cf4595ef https://www.encodeproject.org/files/ENCFF224SUU/@@download/ENCFF224SUU.bigBed hg19 released low read depth experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF506UNA bigWig signal p-value ENCSR718SDE ChIP-seq EFO:0002067 K562 cell line Homo sapiens RLF-human ENCAB069FYQ DNA False 2018-01-26 ENCODE 2 ENCFF317PBJ 1239097785 ENCODE Processing Pipeline 60cad5bb1061b2fbb627891272da6db9 https://www.encodeproject.org/files/ENCFF506UNA/@@download/ENCFF506UNA.bigWig GRCh38 released low read depth experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF643VBD bigWig fold change over control ENCSR718SDE ChIP-seq EFO:0002067 K562 cell line Homo sapiens RLF-human ENCAB069FYQ DNA False 2018-01-26 ENCODE 2 ENCFF317PBJ 1407064570 ENCODE Processing Pipeline c10893c616b85854c31ed27d0314ef78 https://www.encodeproject.org/files/ENCFF643VBD/@@download/ENCFF643VBD.bigWig GRCh38 released low read depth experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF015KQA bigWig fold change over control ENCSR718SDE ChIP-seq EFO:0002067 K562 cell line Homo sapiens RLF-human ENCAB069FYQ DNA False 2018-01-26 ENCODE 2, 3 ENCFF317PBJ, ENCFF852XUO 1862464253 ENCODE Processing Pipeline df180bf95e46a729c720cc6910bc9f39 https://www.encodeproject.org/files/ENCFF015KQA/@@download/ENCFF015KQA.bigWig GRCh38 released low read depth experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF567WID bigBed narrowPeak peaks ENCSR718SDE ChIP-seq EFO:0002067 K562 cell line Homo sapiens RLF-human ENCAB069FYQ DNA False 2018-01-26 ENCODE 2, 3 ENCFF976UUE 13171691 ENCODE Processing Pipeline 15656836cbe1aab32335758f4d0a9873 https://www.encodeproject.org/files/ENCFF567WID/@@download/ENCFF567WID.bigBed GRCh38 released low read depth experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF405DBE bigBed narrowPeak conservative idr thresholded peaks ENCSR718SDE ChIP-seq EFO:0002067 K562 cell line Homo sapiens RLF-human ENCAB069FYQ DNA False 2018-01-26 ENCODE 2, 3 ENCFF453DGG 293610 ENCODE Processing Pipeline 8aaea15cbf56ebbae06c000e4daf1400 https://www.encodeproject.org/files/ENCFF405DBE/@@download/ENCFF405DBE.bigBed GRCh38 released low read depth experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF563QBT bed narrowPeak peaks ENCSR718SDE ChIP-seq EFO:0002067 K562 cell line Homo sapiens RLF-human ENCAB069FYQ DNA False 2018-01-26 ENCODE 2 ENCFF262CJE, ENCFF506DFV, ENCFF562COY 6838700 ENCODE Processing Pipeline 47e85c613e641263ed4641a1ac76de4d https://www.encodeproject.org/files/ENCFF563QBT/@@download/ENCFF563QBT.bed.gz hg19 released low read depth experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF493KWJ bigBed narrowPeak peaks ENCSR718SDE ChIP-seq EFO:0002067 K562 cell line Homo sapiens RLF-human ENCAB069FYQ DNA False 2018-01-26 ENCODE 2 ENCFF563QBT 13265618 ENCODE Processing Pipeline bfb425eaf71e59892a02419723d59625 https://www.encodeproject.org/files/ENCFF493KWJ/@@download/ENCFF493KWJ.bigBed hg19 released low read depth experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF927MKG bigBed narrowPeak peaks ENCSR718SDE ChIP-seq EFO:0002067 K562 cell line Homo sapiens RLF-human ENCAB069FYQ DNA False 2018-01-26 ENCODE 3 ENCFF772ITA 11264885 ENCODE Processing Pipeline a229c9b3eaf5af2018100cd46d040f81 https://www.encodeproject.org/files/ENCFF927MKG/@@download/ENCFF927MKG.bigBed hg19 released low read depth experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF010ZAF bigWig signal p-value ENCSR718SDE ChIP-seq EFO:0002067 K562 cell line Homo sapiens RLF-human ENCAB069FYQ DNA False 2018-01-26 ENCODE 2, 3 ENCFF317PBJ, ENCFF852XUO 1493279518 ENCODE Processing Pipeline 26cca90ff310408c43fa36b584e38cc3 https://www.encodeproject.org/files/ENCFF010ZAF/@@download/ENCFF010ZAF.bigWig GRCh38 released low read depth experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF467MTY bigBed narrowPeak peaks ENCSR718SDE ChIP-seq EFO:0002067 K562 cell line Homo sapiens RLF-human ENCAB069FYQ DNA False 2018-01-26 ENCODE 3 ENCFF343QNN 11284742 ENCODE Processing Pipeline 6e88cbb6ad8403bfbf482968ad3fc35c https://www.encodeproject.org/files/ENCFF467MTY/@@download/ENCFF467MTY.bigBed GRCh38 released low read depth experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF919WXN bigBed narrowPeak peaks ENCSR718SDE ChIP-seq EFO:0002067 K562 cell line Homo sapiens RLF-human ENCAB069FYQ DNA False 2018-01-26 ENCODE 2, 3 ENCFF085CGF 13147179 ENCODE Processing Pipeline 197e8a95d1253db2f1855cd92c5bf108 https://www.encodeproject.org/files/ENCFF919WXN/@@download/ENCFF919WXN.bigBed hg19 released low read depth experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF569QYK bed narrowPeak conservative idr thresholded peaks ENCSR718SDE ChIP-seq EFO:0002067 K562 cell line Homo sapiens RLF-human ENCAB069FYQ DNA False 2018-01-26 ENCODE 2, 3 ENCFF001TDO, ENCFF085CGF, ENCFF563QBT, ENCFF772ITA 135712 ENCODE Processing Pipeline 9c3b63eda9c13243d454eece1f357144 https://www.encodeproject.org/files/ENCFF569QYK/@@download/ENCFF569QYK.bed.gz hg19 released low read depth experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF343QNN bed narrowPeak peaks ENCSR718SDE ChIP-seq EFO:0002067 K562 cell line Homo sapiens RLF-human ENCAB069FYQ DNA False 2018-01-26 ENCODE 3 ENCFF852XUO 6231946 ENCODE Processing Pipeline 82c5f2c8ddf2e45e863132b0221b6e67 https://www.encodeproject.org/files/ENCFF343QNN/@@download/ENCFF343QNN.bed.gz GRCh38 released low read depth experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF599CBB bed narrowPeak optimal idr thresholded peaks ENCSR718SDE ChIP-seq EFO:0002067 K562 cell line Homo sapiens RLF-human ENCAB069FYQ DNA False 2018-01-26 ENCODE 2, 3 ENCFF048ASH, ENCFF343QNN, ENCFF419RSJ, ENCFF976UUE 202298 ENCODE Processing Pipeline a5b03d4daf18d199eb04b379a8b4dcdb https://www.encodeproject.org/files/ENCFF599CBB/@@download/ENCFF599CBB.bed.gz GRCh38 released low read depth experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF453DGG bed narrowPeak conservative idr thresholded peaks ENCSR718SDE ChIP-seq EFO:0002067 K562 cell line Homo sapiens RLF-human ENCAB069FYQ DNA False 2018-01-26 ENCODE 2, 3 ENCFF048ASH, ENCFF343QNN, ENCFF419RSJ, ENCFF976UUE 137266 ENCODE Processing Pipeline ebc706703eae603eabd827c8f63ac8bc https://www.encodeproject.org/files/ENCFF453DGG/@@download/ENCFF453DGG.bed.gz GRCh38 released low read depth experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF833AXS bigBed narrowPeak optimal idr thresholded peaks ENCSR718SDE ChIP-seq EFO:0002067 K562 cell line Homo sapiens RLF-human ENCAB069FYQ DNA False 2018-01-26 ENCODE 2, 3 ENCFF599CBB 460022 ENCODE Processing Pipeline 2552f4c249df96f69695fef997d3bf3e https://www.encodeproject.org/files/ENCFF833AXS/@@download/ENCFF833AXS.bigBed GRCh38 released low read depth experiment not submitted to GEO partially characterized antibody missing control alignments ENCFF000ZAS bigBed narrowPeak peaks ENCSR000EHB ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAL1-human ENCAB000ALO DNA see document see document False 2011-10-29 ENCODE ENCFF001VOZ 2699985 Michael Snyder, Stanford f16936953dddc4232b72ba62c4cf7e3c https://www.encodeproject.org/files/ENCFF000ZAS/@@download/ENCFF000ZAS.bigBed hg19 archived low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF000ZAT bam alignments ENCSR000EHB ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAL1-human ENCAB000ALO DNA see document see document False 2011-10-29 ENCODE 1 ENCFF000ZBX 525888439 Michael Snyder, Stanford a05f53fe0281bfa40539ec69a9b88961 https://www.encodeproject.org/files/ENCFF000ZAT/@@download/ENCFF000ZAT.bam hg19 archived low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF000ZAU bam alignments ENCSR000EHB ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAL1-human ENCAB000ALO DNA see document see document False 2011-10-29 ENCODE 2 ENCFF000ZBR 355510229 Michael Snyder, Stanford dbaf02e3af18e34769551fd1075e6a0c https://www.encodeproject.org/files/ENCFF000ZAU/@@download/ENCFF000ZAU.bam hg19 archived low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF000ZAV bigWig signal ENCSR000EHB ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAL1-human ENCAB000ALO DNA see document see document False 2011-10-29 ENCODE 313990708 Michael Snyder, Stanford 38b0ef95d09d66b7a3f4b3b0fa92e2a2 https://www.encodeproject.org/files/ENCFF000ZAV/@@download/ENCFF000ZAV.bigWig hg19 archived low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample, missing derived_from ENCFF000ZBR fastq reads ENCSR000EHB ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAL1-human ENCAB000ALO DNA see document see document False 2011-10-29 ENCODE 2 1 36 single-ended 665243819 Michael Snyder, Stanford 281de6615757edc6b3756dc689e96f5b https://www.encodeproject.org/files/ENCFF000ZBR/@@download/ENCFF000ZBR.fastq.gz Illumina Genome Analyzer /files/ENCFF000YQC/ released low read depth, inconsistent control read length, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF000ZBX fastq reads ENCSR000EHB ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAL1-human ENCAB000ALO DNA see document see document False 2011-10-29 ENCODE 1 1 36 single-ended 1040306992 Michael Snyder, Stanford 40ccf70650a20beb9079b310c432fed5 https://www.encodeproject.org/files/ENCFF000ZBX/@@download/ENCFF000ZBX.fastq.gz Illumina Genome Analyzer /files/ENCFF000YQB/ released low read depth, inconsistent control read length, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF001VOZ bed narrowPeak peaks ENCSR000EHB ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAL1-human ENCAB000ALO DNA see document see document False 2011-10-29 ENCODE 1044594 Michael Snyder, Stanford 7fd1ea6d689f63e143cbf61acbf5539b https://www.encodeproject.org/files/ENCFF001VOZ/@@download/ENCFF001VOZ.bed.gz hg19 archived low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample, missing derived_from ENCFF002CYH bed narrowPeak optimal idr thresholded peaks ENCSR000EHB ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAL1-human ENCAB000ALO DNA see document see document False 2011-10-29 ENCODE 631761 ENCODE Consortium Analysis Working Group e1679483ad761bef6924874a72a68d6e https://www.encodeproject.org/files/ENCFF002CYH/@@download/ENCFF002CYH.bed.gz hg19 archived low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample, missing derived_from ENCFF733QEC bigBed narrowPeak optimal idr thresholded peaks ENCSR000EHB ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAL1-human ENCAB000ALO DNA see document see document False 2011-10-29 ENCODE ENCFF002CYH 1513748 ENCODE Consortium 43d1c65b8b2fc4432d1f608f72e155c5 https://www.encodeproject.org/files/ENCFF733QEC/@@download/ENCFF733QEC.bigBed hg19 archived low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF737NMZ bam unfiltered alignments ENCSR000EHB ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAL1-human ENCAB000ALO DNA see document see document False 2011-10-29 ENCODE 1 28 ENCFF000ZBX, ENCFF643CGH 1122283309 ENCODE Processing Pipeline 49c9076f2207593a681deed856a2008c https://www.encodeproject.org/files/ENCFF737NMZ/@@download/ENCFF737NMZ.bam GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF067SPF bam alignments ENCSR000EHB ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAL1-human ENCAB000ALO DNA see document see document False 2011-10-29 ENCODE 2 28 ENCFF000ZBR, ENCFF643CGH 431645996 ENCODE Processing Pipeline 453a14a6bb407cca4c713f3661af6290 https://www.encodeproject.org/files/ENCFF067SPF/@@download/ENCFF067SPF.bam GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF688PJI bam unfiltered alignments ENCSR000EHB ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAL1-human ENCAB000ALO DNA see document see document False 2011-10-29 ENCODE 2 28 ENCFF000ZBR, ENCFF643CGH 714619881 ENCODE Processing Pipeline c114b341f4d801ce2a2d2c5f3da2347d https://www.encodeproject.org/files/ENCFF688PJI/@@download/ENCFF688PJI.bam GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF346VYS bam alignments ENCSR000EHB ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAL1-human ENCAB000ALO DNA see document see document False 2011-10-29 ENCODE 1 28 ENCFF000ZBX, ENCFF643CGH 686100526 ENCODE Processing Pipeline 2ac9f8bb03280b0f794ab085d67113e5 https://www.encodeproject.org/files/ENCFF346VYS/@@download/ENCFF346VYS.bam GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF441RJB bam unfiltered alignments ENCSR000EHB ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAL1-human ENCAB000ALO DNA see document see document False 2011-10-29 ENCODE 1 28 ENCFF000ZBX, ENCFF807MUK 1117833358 ENCODE Processing Pipeline a59c6712fdd625ddf8d4d24f29a5cb42 https://www.encodeproject.org/files/ENCFF441RJB/@@download/ENCFF441RJB.bam hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF093JMK bam alignments ENCSR000EHB ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAL1-human ENCAB000ALO DNA see document see document False 2011-10-29 ENCODE 2 28 ENCFF000ZBR, ENCFF807MUK 432137378 ENCODE Processing Pipeline 0f1a8b5d89dc70e641a9092b512ca317 https://www.encodeproject.org/files/ENCFF093JMK/@@download/ENCFF093JMK.bam hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF613ODZ bam alignments ENCSR000EHB ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAL1-human ENCAB000ALO DNA see document see document False 2011-10-29 ENCODE 1 28 ENCFF000ZBX, ENCFF807MUK 686768406 ENCODE Processing Pipeline 79b802532ad294fd5559acb94ff086f1 https://www.encodeproject.org/files/ENCFF613ODZ/@@download/ENCFF613ODZ.bam hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF604LIF bam unfiltered alignments ENCSR000EHB ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAL1-human ENCAB000ALO DNA see document see document False 2011-10-29 ENCODE 2 28 ENCFF000ZBR, ENCFF807MUK 712572126 ENCODE Processing Pipeline a52118bbdd0d5150911e2b9fe39f111a https://www.encodeproject.org/files/ENCFF604LIF/@@download/ENCFF604LIF.bam hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF724UBW bigWig signal p-value ENCSR000EHB ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAL1-human ENCAB000ALO DNA see document see document False 2011-10-29 ENCODE 1 ENCFF156NSV, ENCFF346VYS, ENCFF715JBE 469386507 ENCODE Processing Pipeline 28cdc8568a9e6ecaf34e28d8128d9314 https://www.encodeproject.org/files/ENCFF724UBW/@@download/ENCFF724UBW.bigWig GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF757GHV bigWig fold change over control ENCSR000EHB ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAL1-human ENCAB000ALO DNA see document see document False 2011-10-29 ENCODE 1 ENCFF156NSV, ENCFF346VYS, ENCFF715JBE 409962065 ENCODE Processing Pipeline 4e3ef63d178e9e6ca8823fa0a53e9b54 https://www.encodeproject.org/files/ENCFF757GHV/@@download/ENCFF757GHV.bigWig GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF670PUO bigWig signal p-value ENCSR000EHB ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAL1-human ENCAB000ALO DNA see document see document False 2011-10-29 ENCODE 2 ENCFF067SPF, ENCFF156NSV 271245079 ENCODE Processing Pipeline d393d4932a3346fdf5de68188739cbff https://www.encodeproject.org/files/ENCFF670PUO/@@download/ENCFF670PUO.bigWig GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF407MZH bigWig signal p-value ENCSR000EHB ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAL1-human ENCAB000ALO DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF067SPF, ENCFF156NSV, ENCFF346VYS, ENCFF715JBE 551697998 ENCODE Processing Pipeline 53ffb77a66ee6acba3471f5024d5527b https://www.encodeproject.org/files/ENCFF407MZH/@@download/ENCFF407MZH.bigWig GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF897EYI bigBed narrowPeak optimal idr thresholded peaks ENCSR000EHB ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAL1-human ENCAB000ALO DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF078OUD 893561 ENCODE Processing Pipeline a72101031b20103e5a2e6c03d6352ef6 https://www.encodeproject.org/files/ENCFF897EYI/@@download/ENCFF897EYI.bigBed GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF443VMC bigWig fold change over control ENCSR000EHB ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAL1-human ENCAB000ALO DNA see document see document False 2011-10-29 ENCODE 2 ENCFF067SPF, ENCFF156NSV 226674307 ENCODE Processing Pipeline b7c3d382329f6ab2db4e3336855251ab https://www.encodeproject.org/files/ENCFF443VMC/@@download/ENCFF443VMC.bigWig GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF883EPG bed narrowPeak peaks ENCSR000EHB ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAL1-human ENCAB000ALO DNA see document see document False 2011-10-29 ENCODE 1 ENCFF156NSV, ENCFF346VYS, ENCFF715JBE 4895653 ENCODE Processing Pipeline c9d58dcec95b368cbcff4d6f89defc7c https://www.encodeproject.org/files/ENCFF883EPG/@@download/ENCFF883EPG.bed.gz GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF804SLJ bigBed narrowPeak peaks ENCSR000EHB ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAL1-human ENCAB000ALO DNA see document see document False 2011-10-29 ENCODE 1 ENCFF883EPG 11046492 ENCODE Processing Pipeline ad116f5dea0dd301efe8ba6bf18cc2c8 https://www.encodeproject.org/files/ENCFF804SLJ/@@download/ENCFF804SLJ.bigBed GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF398GMI bed narrowPeak peaks ENCSR000EHB ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAL1-human ENCAB000ALO DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF067SPF, ENCFF156NSV, ENCFF346VYS, ENCFF715JBE 5422923 ENCODE Processing Pipeline 10505813b9f4ddd19898421bbe943aae https://www.encodeproject.org/files/ENCFF398GMI/@@download/ENCFF398GMI.bed.gz GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF779QFW bed narrowPeak peaks ENCSR000EHB ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAL1-human ENCAB000ALO DNA see document see document False 2011-10-29 ENCODE 2 ENCFF067SPF, ENCFF156NSV 4379672 ENCODE Processing Pipeline b7eb59793cff8c4267b8aa1c0ecab346 https://www.encodeproject.org/files/ENCFF779QFW/@@download/ENCFF779QFW.bed.gz GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF590APJ bigBed narrowPeak conservative idr thresholded peaks ENCSR000EHB ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAL1-human ENCAB000ALO DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF563DQA 864795 ENCODE Processing Pipeline b1d3e17c1e07018e40c32cfe049e1e54 https://www.encodeproject.org/files/ENCFF590APJ/@@download/ENCFF590APJ.bigBed GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF868FYM bigWig fold change over control ENCSR000EHB ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAL1-human ENCAB000ALO DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF067SPF, ENCFF156NSV, ENCFF346VYS, ENCFF715JBE 592430251 ENCODE Processing Pipeline f08fa30c5fc306f1acf8af02c56c9b70 https://www.encodeproject.org/files/ENCFF868FYM/@@download/ENCFF868FYM.bigWig GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF078OUD bed narrowPeak optimal idr thresholded peaks ENCSR000EHB ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAL1-human ENCAB000ALO DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF398GMI, ENCFF419RSJ, ENCFF779QFW, ENCFF883EPG 499377 ENCODE Processing Pipeline 7fd38a26279682973b79079be2bd5c58 https://www.encodeproject.org/files/ENCFF078OUD/@@download/ENCFF078OUD.bed.gz GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF015WUF bigBed narrowPeak peaks ENCSR000EHB ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAL1-human ENCAB000ALO DNA see document see document False 2011-10-29 ENCODE 2 ENCFF779QFW 10071604 ENCODE Processing Pipeline e195831289a4cfdd7f2d11fa7b9631df https://www.encodeproject.org/files/ENCFF015WUF/@@download/ENCFF015WUF.bigBed GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF628SYB bigBed narrowPeak peaks ENCSR000EHB ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAL1-human ENCAB000ALO DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF398GMI 11356102 ENCODE Processing Pipeline 3bafa297b4b4c7a925875adfb4386f33 https://www.encodeproject.org/files/ENCFF628SYB/@@download/ENCFF628SYB.bigBed GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF563DQA bed narrowPeak conservative idr thresholded peaks ENCSR000EHB ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAL1-human ENCAB000ALO DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF398GMI, ENCFF419RSJ, ENCFF779QFW, ENCFF883EPG 477654 ENCODE Processing Pipeline 30b1631f819749eb315cff8f5fe43fd0 https://www.encodeproject.org/files/ENCFF563DQA/@@download/ENCFF563DQA.bed.gz GRCh38 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF509LKA bigWig signal p-value ENCSR000EHB ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAL1-human ENCAB000ALO DNA see document see document False 2011-10-29 ENCODE 1 ENCFF498SAC, ENCFF613ODZ, ENCFF732TLR 528577780 ENCODE Processing Pipeline 5895dc5a670ddea06347f94588b87910 https://www.encodeproject.org/files/ENCFF509LKA/@@download/ENCFF509LKA.bigWig hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF098GTD bigWig signal p-value ENCSR000EHB ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAL1-human ENCAB000ALO DNA see document see document False 2011-10-29 ENCODE 2 ENCFF093JMK, ENCFF498SAC 272884672 ENCODE Processing Pipeline d94c0ded075b673fec527584382cd035 https://www.encodeproject.org/files/ENCFF098GTD/@@download/ENCFF098GTD.bigWig hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF490PMI bigWig fold change over control ENCSR000EHB ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAL1-human ENCAB000ALO DNA see document see document False 2011-10-29 ENCODE 2 ENCFF093JMK, ENCFF498SAC 227882155 ENCODE Processing Pipeline 6791dcef4a787f7c2c28b7c18b2d3803 https://www.encodeproject.org/files/ENCFF490PMI/@@download/ENCFF490PMI.bigWig hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF565MMA bigWig fold change over control ENCSR000EHB ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAL1-human ENCAB000ALO DNA see document see document False 2011-10-29 ENCODE 1 ENCFF498SAC, ENCFF613ODZ, ENCFF732TLR 397605676 ENCODE Processing Pipeline 378a1df5fc1dbeca679dc583bd4e51dd https://www.encodeproject.org/files/ENCFF565MMA/@@download/ENCFF565MMA.bigWig hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF368ASJ bigWig signal p-value ENCSR000EHB ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAL1-human ENCAB000ALO DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF093JMK, ENCFF498SAC, ENCFF613ODZ, ENCFF732TLR 551911079 ENCODE Processing Pipeline 7df2ec999eff786af9a591d5b86ad93a https://www.encodeproject.org/files/ENCFF368ASJ/@@download/ENCFF368ASJ.bigWig hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF028EAN bed narrowPeak peaks ENCSR000EHB ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAL1-human ENCAB000ALO DNA see document see document False 2011-10-29 ENCODE 1 ENCFF498SAC, ENCFF613ODZ, ENCFF732TLR 4900137 ENCODE Processing Pipeline b26dddd8db39fbaa02cca337b263fc5e https://www.encodeproject.org/files/ENCFF028EAN/@@download/ENCFF028EAN.bed.gz hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF056GMV bed narrowPeak peaks ENCSR000EHB ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAL1-human ENCAB000ALO DNA see document see document False 2011-10-29 ENCODE 2 ENCFF093JMK, ENCFF498SAC 4385525 ENCODE Processing Pipeline 9a624a810a31b4f45f9bb4359ddf1fc8 https://www.encodeproject.org/files/ENCFF056GMV/@@download/ENCFF056GMV.bed.gz hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF844LWM bigBed narrowPeak peaks ENCSR000EHB ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAL1-human ENCAB000ALO DNA see document see document False 2011-10-29 ENCODE 1 ENCFF028EAN 11040966 ENCODE Processing Pipeline ff9f1daaf1036b6d2d565a6995aff34e https://www.encodeproject.org/files/ENCFF844LWM/@@download/ENCFF844LWM.bigBed hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF822ERD bigWig fold change over control ENCSR000EHB ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAL1-human ENCAB000ALO DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF093JMK, ENCFF498SAC, ENCFF613ODZ, ENCFF732TLR 594083335 ENCODE Processing Pipeline 4868bc4c0ac8251ded1b56dce6a8b985 https://www.encodeproject.org/files/ENCFF822ERD/@@download/ENCFF822ERD.bigWig hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF567HZK bed narrowPeak peaks ENCSR000EHB ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAL1-human ENCAB000ALO DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF093JMK, ENCFF498SAC, ENCFF613ODZ, ENCFF732TLR 5427089 ENCODE Processing Pipeline 7ac3b1da5d1f17759d3653ce3dd1e3f4 https://www.encodeproject.org/files/ENCFF567HZK/@@download/ENCFF567HZK.bed.gz hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF796KJX bigBed narrowPeak peaks ENCSR000EHB ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAL1-human ENCAB000ALO DNA see document see document False 2011-10-29 ENCODE 2 ENCFF056GMV 10071733 ENCODE Processing Pipeline 955ccce59f9291d256c0bd0e23a58e27 https://www.encodeproject.org/files/ENCFF796KJX/@@download/ENCFF796KJX.bigBed hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF482CEV bed narrowPeak optimal idr thresholded peaks ENCSR000EHB ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAL1-human ENCAB000ALO DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF001TDO, ENCFF028EAN, ENCFF056GMV, ENCFF567HZK 504630 ENCODE Processing Pipeline 64b1a7c24e3ca92449341ced85c8cbed https://www.encodeproject.org/files/ENCFF482CEV/@@download/ENCFF482CEV.bed.gz hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF880YZE bigBed narrowPeak peaks ENCSR000EHB ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAL1-human ENCAB000ALO DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF567HZK 11353688 ENCODE Processing Pipeline 7fc2d16ebd1d8bb8f7fd679e96539b35 https://www.encodeproject.org/files/ENCFF880YZE/@@download/ENCFF880YZE.bigBed hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF519DOC bed narrowPeak conservative idr thresholded peaks ENCSR000EHB ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAL1-human ENCAB000ALO DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF001TDO, ENCFF028EAN, ENCFF056GMV, ENCFF567HZK 476428 ENCODE Processing Pipeline b37d0b6316750f3314161b0a1a279f19 https://www.encodeproject.org/files/ENCFF519DOC/@@download/ENCFF519DOC.bed.gz hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF885KVK bigBed narrowPeak conservative idr thresholded peaks ENCSR000EHB ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAL1-human ENCAB000ALO DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF519DOC 862303 ENCODE Processing Pipeline f431572e9e10cb33b6a1dbed09ce6aea https://www.encodeproject.org/files/ENCFF885KVK/@@download/ENCFF885KVK.bigBed hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF945UCD bigBed narrowPeak optimal idr thresholded peaks ENCSR000EHB ChIP-seq EFO:0002067 K562 cell line Homo sapiens TAL1-human ENCAB000ALO DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF482CEV 900582 ENCODE Processing Pipeline c0c74292549cfad3f0d149ab005cbba4 https://www.encodeproject.org/files/ENCFF945UCD/@@download/ENCFF945UCD.bigBed hg19 released low read depth, inconsistent target of control experiment, low read length biological replicates with identical biosample ENCFF455UQA fastq reads ENCSR798ILC ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOR1-human ENCAB025LCD DNA False 2016-11-30 ENCODE 1 1 100 paired-ended 1 ENCFF714KWX 1592632022 Michael Snyder, Stanford a2a6fa2d372c7029ad41cd55c128e9a3 SRA:SRR5112090 https://www.encodeproject.org/files/ENCFF455UQA/@@download/ENCFF455UQA.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFF/ released low read depth ENCFF714KWX fastq reads ENCSR798ILC ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOR1-human ENCAB025LCD DNA False 2016-11-30 ENCODE 1 1 100 paired-ended 2 ENCFF455UQA 1655190830 Michael Snyder, Stanford 751c115cf10c8e189f318212e3caa0aa SRA:SRR5112090 https://www.encodeproject.org/files/ENCFF714KWX/@@download/ENCFF714KWX.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFH/ released low read depth ENCFF268XRY fastq reads ENCSR798ILC ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOR1-human ENCAB025LCD DNA False 2016-11-30 ENCODE 2 1 100 paired-ended 1 ENCFF642TLW 1844696191 Michael Snyder, Stanford 4932de7a42048cb3dd2c793d5ee67ce1 SRA:SRR5112091 https://www.encodeproject.org/files/ENCFF268XRY/@@download/ENCFF268XRY.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFD/ released low read depth ENCFF642TLW fastq reads ENCSR798ILC ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOR1-human ENCAB025LCD DNA False 2016-11-30 ENCODE 2 1 100 paired-ended 2 ENCFF268XRY 1914533310 Michael Snyder, Stanford eb0a2c37f52b8628f44d7783b1a4f197 SRA:SRR5112091 https://www.encodeproject.org/files/ENCFF642TLW/@@download/ENCFF642TLW.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFA/ released low read depth ENCFF246WTN bam unfiltered alignments ENCSR798ILC ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOR1-human ENCAB025LCD DNA False 2016-11-30 ENCODE 1 100 ENCFF455UQA, ENCFF714KWX, ENCFF807MUK 3557652207 ENCODE Processing Pipeline 1f2a4c921c410907868c86fec0a0c239 https://www.encodeproject.org/files/ENCFF246WTN/@@download/ENCFF246WTN.bam hg19 released low read depth ENCFF059UBN bam unfiltered alignments ENCSR798ILC ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOR1-human ENCAB025LCD DNA False 2016-11-30 ENCODE 1 100 ENCFF455UQA, ENCFF643CGH, ENCFF714KWX 3560028918 ENCODE Processing Pipeline 0d5452477056a1748f8e4f7b327a2491 https://www.encodeproject.org/files/ENCFF059UBN/@@download/ENCFF059UBN.bam GRCh38 released low read depth ENCFF239BDK bam unfiltered alignments ENCSR798ILC ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOR1-human ENCAB025LCD DNA False 2016-11-30 ENCODE 2 100 ENCFF268XRY, ENCFF642TLW, ENCFF807MUK 4074020378 ENCODE Processing Pipeline 62d007fcd13b654d79b011b86cdc29e2 https://www.encodeproject.org/files/ENCFF239BDK/@@download/ENCFF239BDK.bam hg19 released low read depth ENCFF694HJF bam unfiltered alignments ENCSR798ILC ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOR1-human ENCAB025LCD DNA False 2016-11-30 ENCODE 2 100 ENCFF268XRY, ENCFF642TLW, ENCFF643CGH 4076790612 ENCODE Processing Pipeline 17940750749b6fb1fd4bfa1d32ad1f0a https://www.encodeproject.org/files/ENCFF694HJF/@@download/ENCFF694HJF.bam GRCh38 released low read depth ENCFF690CWG bam alignments ENCSR798ILC ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOR1-human ENCAB025LCD DNA False 2016-11-30 ENCODE 2 100 ENCFF268XRY, ENCFF642TLW, ENCFF807MUK 3318211048 ENCODE Processing Pipeline b28f764a8693e61bb0fc192f28d10c51 https://www.encodeproject.org/files/ENCFF690CWG/@@download/ENCFF690CWG.bam hg19 released low read depth ENCFF411PRP bam alignments ENCSR798ILC ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOR1-human ENCAB025LCD DNA False 2016-11-30 ENCODE 1 100 ENCFF455UQA, ENCFF714KWX, ENCFF807MUK 2929738879 ENCODE Processing Pipeline 57865b66061b4d2a9bf47c96f32ce65d https://www.encodeproject.org/files/ENCFF411PRP/@@download/ENCFF411PRP.bam hg19 released low read depth ENCFF072KEJ bam alignments ENCSR798ILC ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOR1-human ENCAB025LCD DNA False 2016-11-30 ENCODE 2 100 ENCFF268XRY, ENCFF642TLW, ENCFF643CGH 3320931923 ENCODE Processing Pipeline e6cb9fa4c68ecc8dc2c6fb9e23d74d82 https://www.encodeproject.org/files/ENCFF072KEJ/@@download/ENCFF072KEJ.bam GRCh38 released low read depth ENCFF033JFM bam alignments ENCSR798ILC ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOR1-human ENCAB025LCD DNA False 2016-11-30 ENCODE 1 100 ENCFF455UQA, ENCFF643CGH, ENCFF714KWX 2931511017 ENCODE Processing Pipeline 3a4540f9e0b9d8f043c821129614407b https://www.encodeproject.org/files/ENCFF033JFM/@@download/ENCFF033JFM.bam GRCh38 released low read depth ENCFF268RNI bigWig signal p-value ENCSR798ILC ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOR1-human ENCAB025LCD DNA False 2016-11-30 ENCODE 1 ENCFF411PRP, ENCFF581ZJL 1054654074 ENCODE Processing Pipeline d5c586a01646c87e70a186ea5068ef40 https://www.encodeproject.org/files/ENCFF268RNI/@@download/ENCFF268RNI.bigWig hg19 released low read depth ENCFF259SKO bigWig signal p-value ENCSR798ILC ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOR1-human ENCAB025LCD DNA False 2016-11-30 ENCODE 2 ENCFF051LWI, ENCFF690CWG 1118906805 ENCODE Processing Pipeline ed42e0ef24a792a7bf6a983de5057e4f https://www.encodeproject.org/files/ENCFF259SKO/@@download/ENCFF259SKO.bigWig hg19 released low read depth ENCFF357TSR bigWig signal p-value ENCSR798ILC ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOR1-human ENCAB025LCD DNA False 2016-11-30 ENCODE 1, 2 ENCFF051LWI, ENCFF411PRP, ENCFF581ZJL, ENCFF690CWG 1870179718 ENCODE Processing Pipeline 8f449ebe2985511fb6c62775c1aab6a6 https://www.encodeproject.org/files/ENCFF357TSR/@@download/ENCFF357TSR.bigWig hg19 released low read depth ENCFF034NZW bigWig fold change over control ENCSR798ILC ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOR1-human ENCAB025LCD DNA False 2016-11-30 ENCODE 1 ENCFF411PRP, ENCFF581ZJL 954208367 ENCODE Processing Pipeline 71417175a14dd82019013671f0869065 https://www.encodeproject.org/files/ENCFF034NZW/@@download/ENCFF034NZW.bigWig hg19 released low read depth ENCFF468DEE bigWig fold change over control ENCSR798ILC ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOR1-human ENCAB025LCD DNA False 2016-11-30 ENCODE 2 ENCFF051LWI, ENCFF690CWG 983320466 ENCODE Processing Pipeline 776d150a00caa32103026fced7ab7d27 https://www.encodeproject.org/files/ENCFF468DEE/@@download/ENCFF468DEE.bigWig hg19 released low read depth ENCFF733BAD bed narrowPeak peaks ENCSR798ILC ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOR1-human ENCAB025LCD DNA False 2016-11-30 ENCODE 2 ENCFF051LWI, ENCFF690CWG 6810880 ENCODE Processing Pipeline 1099a7eba7de19b93fa68046112910e4 https://www.encodeproject.org/files/ENCFF733BAD/@@download/ENCFF733BAD.bed.gz hg19 released low read depth ENCFF649STG bed narrowPeak peaks ENCSR798ILC ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOR1-human ENCAB025LCD DNA False 2016-11-30 ENCODE 1, 2 ENCFF051LWI, ENCFF411PRP, ENCFF581ZJL, ENCFF690CWG 7225762 ENCODE Processing Pipeline d3445bb552d890141b649942e051b032 https://www.encodeproject.org/files/ENCFF649STG/@@download/ENCFF649STG.bed.gz hg19 released low read depth ENCFF412XOO bigBed narrowPeak peaks ENCSR798ILC ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOR1-human ENCAB025LCD DNA False 2016-11-30 ENCODE 2 ENCFF733BAD 13286752 ENCODE Processing Pipeline de5bedd9b46811337f4506c71c495a2f https://www.encodeproject.org/files/ENCFF412XOO/@@download/ENCFF412XOO.bigBed hg19 released low read depth ENCFF535HME bigBed narrowPeak optimal idr thresholded peaks ENCSR798ILC ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOR1-human ENCAB025LCD DNA False 2016-11-30 ENCODE 1, 2 ENCFF366UBB 1057880 ENCODE Processing Pipeline 39b3d16fd51552bb594d0d159c4d89fb https://www.encodeproject.org/files/ENCFF535HME/@@download/ENCFF535HME.bigBed hg19 released low read depth ENCFF202DLT bigBed narrowPeak peaks ENCSR798ILC ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOR1-human ENCAB025LCD DNA False 2016-11-30 ENCODE 1 ENCFF810EAC 13228422 ENCODE Processing Pipeline a97b3a18a9d69b9629466b6baf843d0b https://www.encodeproject.org/files/ENCFF202DLT/@@download/ENCFF202DLT.bigBed hg19 released low read depth ENCFF211OZC bigWig fold change over control ENCSR798ILC ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOR1-human ENCAB025LCD DNA False 2016-11-30 ENCODE 1, 2 ENCFF051LWI, ENCFF411PRP, ENCFF581ZJL, ENCFF690CWG 1858187980 ENCODE Processing Pipeline 47dcb96e8d9e1ccb86d8b9b4cfd09004 https://www.encodeproject.org/files/ENCFF211OZC/@@download/ENCFF211OZC.bigWig hg19 released low read depth ENCFF810EAC bed narrowPeak peaks ENCSR798ILC ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOR1-human ENCAB025LCD DNA False 2016-11-30 ENCODE 1 ENCFF411PRP, ENCFF581ZJL 6721746 ENCODE Processing Pipeline 5cc4b114acb6825cc1974b8168d3c37e https://www.encodeproject.org/files/ENCFF810EAC/@@download/ENCFF810EAC.bed.gz hg19 released low read depth ENCFF383XBY bigBed narrowPeak peaks ENCSR798ILC ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOR1-human ENCAB025LCD DNA False 2016-11-30 ENCODE 1, 2 ENCFF649STG 13140423 ENCODE Processing Pipeline eea6e663539b1d3803449f30783df316 https://www.encodeproject.org/files/ENCFF383XBY/@@download/ENCFF383XBY.bigBed hg19 released low read depth ENCFF366UBB bed narrowPeak optimal idr thresholded peaks ENCSR798ILC ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOR1-human ENCAB025LCD DNA False 2016-11-30 ENCODE 1, 2 ENCFF001TDO, ENCFF649STG, ENCFF733BAD, ENCFF810EAC 523344 ENCODE Processing Pipeline b70248917b378e34aa1952f19b956f77 https://www.encodeproject.org/files/ENCFF366UBB/@@download/ENCFF366UBB.bed.gz hg19 released low read depth ENCFF098XOZ bed narrowPeak conservative idr thresholded peaks ENCSR798ILC ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOR1-human ENCAB025LCD DNA False 2016-11-30 ENCODE 1, 2 ENCFF001TDO, ENCFF649STG, ENCFF733BAD, ENCFF810EAC 448046 ENCODE Processing Pipeline c4dcbcdc941c978113d733fb61f5d29c https://www.encodeproject.org/files/ENCFF098XOZ/@@download/ENCFF098XOZ.bed.gz hg19 released low read depth ENCFF306SLO bigBed narrowPeak conservative idr thresholded peaks ENCSR798ILC ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOR1-human ENCAB025LCD DNA False 2016-11-30 ENCODE 1, 2 ENCFF098XOZ 944007 ENCODE Processing Pipeline 87a7de851704c7f36df0a165b6e030eb https://www.encodeproject.org/files/ENCFF306SLO/@@download/ENCFF306SLO.bigBed hg19 released low read depth ENCFF623VCR bigWig signal p-value ENCSR798ILC ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOR1-human ENCAB025LCD DNA False 2016-11-30 ENCODE 1 ENCFF033JFM, ENCFF910IKB 943773278 ENCODE Processing Pipeline 2cd214a4f032ec3966678d8ac4b2c6d1 https://www.encodeproject.org/files/ENCFF623VCR/@@download/ENCFF623VCR.bigWig GRCh38 released low read depth ENCFF950WOV bigWig signal p-value ENCSR798ILC ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOR1-human ENCAB025LCD DNA False 2016-11-30 ENCODE 2 ENCFF072KEJ, ENCFF227IZS 933038297 ENCODE Processing Pipeline 9a9c741ca9e2b8d7a3c33955baaf6cad https://www.encodeproject.org/files/ENCFF950WOV/@@download/ENCFF950WOV.bigWig GRCh38 released low read depth ENCFF626JAJ bigWig signal p-value ENCSR798ILC ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOR1-human ENCAB025LCD DNA False 2016-11-30 ENCODE 1, 2 ENCFF033JFM, ENCFF072KEJ, ENCFF227IZS, ENCFF910IKB 1522828400 ENCODE Processing Pipeline f45582db6377f85d588439c927b13aad https://www.encodeproject.org/files/ENCFF626JAJ/@@download/ENCFF626JAJ.bigWig GRCh38 released low read depth ENCFF389LMM bigWig fold change over control ENCSR798ILC ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOR1-human ENCAB025LCD DNA False 2016-11-30 ENCODE 1 ENCFF033JFM, ENCFF910IKB 951078888 ENCODE Processing Pipeline 61c578a64ed790636b8051ff5abf5003 https://www.encodeproject.org/files/ENCFF389LMM/@@download/ENCFF389LMM.bigWig GRCh38 released low read depth ENCFF967IQQ bigWig fold change over control ENCSR798ILC ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOR1-human ENCAB025LCD DNA False 2016-11-30 ENCODE 2 ENCFF072KEJ, ENCFF227IZS 988618414 ENCODE Processing Pipeline 397bfc457d74c75793e20de3e80e4cf8 https://www.encodeproject.org/files/ENCFF967IQQ/@@download/ENCFF967IQQ.bigWig GRCh38 released low read depth ENCFF864EVQ bigWig fold change over control ENCSR798ILC ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOR1-human ENCAB025LCD DNA False 2016-11-30 ENCODE 1, 2 ENCFF033JFM, ENCFF072KEJ, ENCFF227IZS, ENCFF910IKB 1864090059 ENCODE Processing Pipeline 35571095265b291941385765119eedfc https://www.encodeproject.org/files/ENCFF864EVQ/@@download/ENCFF864EVQ.bigWig GRCh38 released low read depth ENCFF512XHP bed narrowPeak peaks ENCSR798ILC ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOR1-human ENCAB025LCD DNA False 2016-11-30 ENCODE 1, 2 ENCFF033JFM, ENCFF072KEJ, ENCFF227IZS, ENCFF910IKB 7127787 ENCODE Processing Pipeline 5c15ab9b57ee3c699a8398c74b74cc69 https://www.encodeproject.org/files/ENCFF512XHP/@@download/ENCFF512XHP.bed.gz GRCh38 released low read depth ENCFF917BXV bed narrowPeak peaks ENCSR798ILC ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOR1-human ENCAB025LCD DNA False 2016-11-30 ENCODE 2 ENCFF072KEJ, ENCFF227IZS 6704878 ENCODE Processing Pipeline 73a22a5dd8710492a27107d660700ac2 https://www.encodeproject.org/files/ENCFF917BXV/@@download/ENCFF917BXV.bed.gz GRCh38 released low read depth ENCFF738GOD bigBed narrowPeak peaks ENCSR798ILC ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOR1-human ENCAB025LCD DNA False 2016-11-30 ENCODE 1, 2 ENCFF512XHP 13056030 ENCODE Processing Pipeline ad05a020d8d52d959690f7290cafd902 https://www.encodeproject.org/files/ENCFF738GOD/@@download/ENCFF738GOD.bigBed GRCh38 released low read depth ENCFF150TDO bed narrowPeak peaks ENCSR798ILC ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOR1-human ENCAB025LCD DNA False 2016-11-30 ENCODE 1 ENCFF033JFM, ENCFF910IKB 6561010 ENCODE Processing Pipeline f3deb96da0f612c01ee43892b636aa8d https://www.encodeproject.org/files/ENCFF150TDO/@@download/ENCFF150TDO.bed.gz GRCh38 released low read depth ENCFF006WPP bigBed narrowPeak peaks ENCSR798ILC ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOR1-human ENCAB025LCD DNA False 2016-11-30 ENCODE 2 ENCFF917BXV 13284228 ENCODE Processing Pipeline 9b19375ed136e57837cb77d7f7326bc6 https://www.encodeproject.org/files/ENCFF006WPP/@@download/ENCFF006WPP.bigBed GRCh38 released low read depth ENCFF280GSX bigBed narrowPeak peaks ENCSR798ILC ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOR1-human ENCAB025LCD DNA False 2016-11-30 ENCODE 1 ENCFF150TDO 13163444 ENCODE Processing Pipeline 64ad82a053f0a3179fe65e95612a25d1 https://www.encodeproject.org/files/ENCFF280GSX/@@download/ENCFF280GSX.bigBed GRCh38 released low read depth ENCFF028DNS bigBed narrowPeak conservative idr thresholded peaks ENCSR798ILC ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOR1-human ENCAB025LCD DNA False 2016-11-30 ENCODE 1, 2 ENCFF032MJB 913764 ENCODE Processing Pipeline 1fec6d7da6617aeddf61df88dd712acc https://www.encodeproject.org/files/ENCFF028DNS/@@download/ENCFF028DNS.bigBed GRCh38 released low read depth ENCFF007ZUL bed narrowPeak optimal idr thresholded peaks ENCSR798ILC ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOR1-human ENCAB025LCD DNA False 2016-11-30 ENCODE 1, 2 ENCFF150TDO, ENCFF419RSJ, ENCFF512XHP, ENCFF917BXV 490433 ENCODE Processing Pipeline 878253b762325dff1663e201db17803c https://www.encodeproject.org/files/ENCFF007ZUL/@@download/ENCFF007ZUL.bed.gz GRCh38 released low read depth ENCFF759UHQ bigBed narrowPeak optimal idr thresholded peaks ENCSR798ILC ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOR1-human ENCAB025LCD DNA False 2016-11-30 ENCODE 1, 2 ENCFF007ZUL 1011426 ENCODE Processing Pipeline fd083cfcb754f381ca96212183b09a59 https://www.encodeproject.org/files/ENCFF759UHQ/@@download/ENCFF759UHQ.bigBed GRCh38 released low read depth ENCFF032MJB bed narrowPeak conservative idr thresholded peaks ENCSR798ILC ChIP-seq EFO:0002067 K562 cell line Homo sapiens NCOR1-human ENCAB025LCD DNA False 2016-11-30 ENCODE 1, 2 ENCFF150TDO, ENCFF419RSJ, ENCFF512XHP, ENCFF917BXV 424894 ENCODE Processing Pipeline 4827f9e193c2a9aac07eea85936856e9 https://www.encodeproject.org/files/ENCFF032MJB/@@download/ENCFF032MJB.bed.gz GRCh38 released low read depth ENCFF000YRV bam alignments ENCSR000EGT ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour IRF1-human ENCAB000AHX DNA see document see document False 2011-10-29 ENCODE 2 ENCFF000YTB 195127585 Michael Snyder, Stanford b1f7b9e9564f46ae8ce73f48dc4011e2 https://www.encodeproject.org/files/ENCFF000YRV/@@download/ENCFF000YRV.bam hg19 archived mixed read lengths, control low read depth, low read depth, low read length biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF000YRW bam alignments ENCSR000EGT ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour IRF1-human ENCAB000AHX DNA see document see document False 2011-10-29 ENCODE 1 ENCFF000YSV 312121537 Michael Snyder, Stanford 9af3b7f86799ecc76158e8729920e076 https://www.encodeproject.org/files/ENCFF000YRW/@@download/ENCFF000YRW.bam hg19 archived mixed read lengths, control low read depth, low read depth, low read length biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF000YRZ bigWig signal ENCSR000EGT ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour IRF1-human ENCAB000AHX DNA see document see document False 2011-10-29 ENCODE 339374189 Michael Snyder, Stanford 53379f12e90b80fb24cb82b5ebbf6637 https://www.encodeproject.org/files/ENCFF000YRZ/@@download/ENCFF000YRZ.bigWig hg19 archived mixed read lengths, control low read depth, low read depth, low read length biological replicates with identical biosample, missing derived_from insufficient read length, insufficient read depth ENCFF000YSV fastq reads ENCSR000EGT ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour IRF1-human ENCAB000AHX DNA see document see document False 2011-10-29 ENCODE 1 1 36 single-ended 819768922 Michael Snyder, Stanford 8c546920b7617a7083854bddef7f961c https://www.encodeproject.org/files/ENCFF000YSV/@@download/ENCFF000YSV.fastq.gz Illumina Genome Analyzer /files/ENCFF000YPZ/ released mixed read lengths, control low read depth, low read depth, low read length biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF000YTB fastq reads ENCSR000EGT ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour IRF1-human ENCAB000AHX DNA see document see document False 2011-10-29 ENCODE 2 1 27 single-ended 531998736 Michael Snyder, Stanford 6306dc71f00b2a3b6ecc1e743b44120a https://www.encodeproject.org/files/ENCFF000YTB/@@download/ENCFF000YTB.fastq.gz Illumina Genome Analyzer /files/ENCFF000YPZ/ released mixed read lengths, control low read depth, low read depth, inconsistent control read length, low read length biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF002CWY bed narrowPeak optimal idr thresholded peaks ENCSR000EGT ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour IRF1-human ENCAB000AHX DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF000YRV, ENCFF000YRW 281340 ENCODE Consortium Analysis Working Group 1fe51e31a98f953e464df554d510bbd2 https://www.encodeproject.org/files/ENCFF002CWY/@@download/ENCFF002CWY.bed.gz hg19 archived mixed read lengths, control low read depth, low read depth, low read length biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF593EPI bigBed narrowPeak optimal idr thresholded peaks ENCSR000EGT ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour IRF1-human ENCAB000AHX DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF002CWY 608791 ENCODE Consortium 0bbdfafd61a962a916b32c8a19c0c65d https://www.encodeproject.org/files/ENCFF593EPI/@@download/ENCFF593EPI.bigBed hg19 archived mixed read lengths, control low read depth, low read depth, low read length biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF468BAA bam alignments ENCSR000EGT ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour IRF1-human ENCAB000AHX DNA see document see document False 2011-10-29 ENCODE 1 27 ENCFF000YSV, ENCFF807MUK 456657999 ENCODE Processing Pipeline 6ef33cc8aa983408d3e65c426013a9c0 https://www.encodeproject.org/files/ENCFF468BAA/@@download/ENCFF468BAA.bam hg19 released mixed read lengths, control low read depth, low read depth, low read length biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF741YEW bam alignments ENCSR000EGT ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour IRF1-human ENCAB000AHX DNA see document see document False 2011-10-29 ENCODE 2 27 ENCFF000YTB, ENCFF807MUK 296026443 ENCODE Processing Pipeline 4478a676b204b1cb8a36715a6de60ccb https://www.encodeproject.org/files/ENCFF741YEW/@@download/ENCFF741YEW.bam hg19 released mixed read lengths, control low read depth, low read depth, low read length biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF992NMH bam unfiltered alignments ENCSR000EGT ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour IRF1-human ENCAB000AHX DNA see document see document False 2011-10-29 ENCODE 2 27 ENCFF000YTB, ENCFF807MUK 702987284 ENCODE Processing Pipeline 110c0b7a6bc8bbb97a5813499bfb4ad9 https://www.encodeproject.org/files/ENCFF992NMH/@@download/ENCFF992NMH.bam hg19 released mixed read lengths, control low read depth, low read depth, low read length biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF979OKQ bam unfiltered alignments ENCSR000EGT ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour IRF1-human ENCAB000AHX DNA see document see document False 2011-10-29 ENCODE 1 27 ENCFF000YSV, ENCFF807MUK 836534553 ENCODE Processing Pipeline 1f2d4fa0d7da185a5bc31520a30f3abc https://www.encodeproject.org/files/ENCFF979OKQ/@@download/ENCFF979OKQ.bam hg19 released mixed read lengths, control low read depth, low read depth, low read length biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF928SVR bigBed narrowPeak peaks ENCSR000EGT ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour IRF1-human ENCAB000AHX DNA see document see document False 2011-10-29 ENCODE 1 ENCFF998DOG 10240416 ENCODE Processing Pipeline ec9a5f5fda1c6479c246c5cb7a35204e https://www.encodeproject.org/files/ENCFF928SVR/@@download/ENCFF928SVR.bigBed hg19 released mixed read lengths, control low read depth, low read depth, low read length biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF998DOG bed narrowPeak peaks ENCSR000EGT ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour IRF1-human ENCAB000AHX DNA see document see document False 2011-10-29 ENCODE 1 ENCFF331ARQ, ENCFF468BAA 4386773 ENCODE Processing Pipeline fbf22b1fa5c379715ba2c26fac7097af https://www.encodeproject.org/files/ENCFF998DOG/@@download/ENCFF998DOG.bed.gz hg19 released mixed read lengths, control low read depth, low read depth, low read length biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF145WIA bigBed narrowPeak optimal idr thresholded peaks ENCSR000EGT ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour IRF1-human ENCAB000AHX DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF284VUQ 469022 ENCODE Processing Pipeline e483e694c9b911039e0a1dcac3d18eed https://www.encodeproject.org/files/ENCFF145WIA/@@download/ENCFF145WIA.bigBed hg19 released mixed read lengths, control low read depth, low read depth, low read length biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF584WLG bigWig signal p-value ENCSR000EGT ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour IRF1-human ENCAB000AHX DNA see document see document False 2011-10-29 ENCODE 1 ENCFF331ARQ, ENCFF468BAA 276215720 ENCODE Processing Pipeline c126cbce87484186f3103837c554e1e0 https://www.encodeproject.org/files/ENCFF584WLG/@@download/ENCFF584WLG.bigWig hg19 released mixed read lengths, control low read depth, low read depth, low read length biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF263TDA bigWig signal p-value ENCSR000EGT ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour IRF1-human ENCAB000AHX DNA see document see document False 2011-10-29 ENCODE 2 ENCFF331ARQ, ENCFF741YEW 204526796 ENCODE Processing Pipeline 50899d7dc8bf346977143c32d3c80dd4 https://www.encodeproject.org/files/ENCFF263TDA/@@download/ENCFF263TDA.bigWig hg19 released mixed read lengths, control low read depth, low read depth, low read length biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF615YXA bigWig fold change over control ENCSR000EGT ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour IRF1-human ENCAB000AHX DNA see document see document False 2011-10-29 ENCODE 2 ENCFF331ARQ, ENCFF741YEW 133988957 ENCODE Processing Pipeline 6aa25589c618116f5a060005f2e9921b https://www.encodeproject.org/files/ENCFF615YXA/@@download/ENCFF615YXA.bigWig hg19 released mixed read lengths, control low read depth, low read depth, low read length biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF456WXA bigWig fold change over control ENCSR000EGT ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour IRF1-human ENCAB000AHX DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF331ARQ, ENCFF468BAA, ENCFF741YEW 307592391 ENCODE Processing Pipeline ee8cd3ea23ce2728fa86e759a15952c3 https://www.encodeproject.org/files/ENCFF456WXA/@@download/ENCFF456WXA.bigWig hg19 released mixed read lengths, control low read depth, low read depth, low read length biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF365OUP bigBed narrowPeak conservative idr thresholded peaks ENCSR000EGT ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour IRF1-human ENCAB000AHX DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF999SXR 447424 ENCODE Processing Pipeline 856b2457a67a6f0c3bd2da234aeda7e0 https://www.encodeproject.org/files/ENCFF365OUP/@@download/ENCFF365OUP.bigBed hg19 released mixed read lengths, control low read depth, low read depth, low read length biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF897KKM bigWig signal p-value ENCSR000EGT ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour IRF1-human ENCAB000AHX DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF331ARQ, ENCFF468BAA, ENCFF741YEW 282605739 ENCODE Processing Pipeline d3340e4cc1b7247a68d0b871b4254368 https://www.encodeproject.org/files/ENCFF897KKM/@@download/ENCFF897KKM.bigWig hg19 released mixed read lengths, control low read depth, low read depth, low read length biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF862ASJ bigBed narrowPeak peaks ENCSR000EGT ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour IRF1-human ENCAB000AHX DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF074NOU 10604409 ENCODE Processing Pipeline cfefd1c7a7fd759959ac6eb1884edbf7 https://www.encodeproject.org/files/ENCFF862ASJ/@@download/ENCFF862ASJ.bigBed hg19 released mixed read lengths, control low read depth, low read depth, low read length biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF257OOI bigWig fold change over control ENCSR000EGT ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour IRF1-human ENCAB000AHX DNA see document see document False 2011-10-29 ENCODE 1 ENCFF331ARQ, ENCFF468BAA 209578697 ENCODE Processing Pipeline 4a7e3f7a87586f5346a85b178a79f18d https://www.encodeproject.org/files/ENCFF257OOI/@@download/ENCFF257OOI.bigWig hg19 released mixed read lengths, control low read depth, low read depth, low read length biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF074NOU bed narrowPeak peaks ENCSR000EGT ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour IRF1-human ENCAB000AHX DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF331ARQ, ENCFF468BAA, ENCFF741YEW 4740714 ENCODE Processing Pipeline 156e0def1016e3c17aac62329795254a https://www.encodeproject.org/files/ENCFF074NOU/@@download/ENCFF074NOU.bed.gz hg19 released mixed read lengths, control low read depth, low read depth, low read length biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF073YUF bigBed narrowPeak peaks ENCSR000EGT ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour IRF1-human ENCAB000AHX DNA see document see document False 2011-10-29 ENCODE 2 ENCFF456MUP 6346251 ENCODE Processing Pipeline 2ff600ac8d9fc3de9c1a5b55c3f9f469 https://www.encodeproject.org/files/ENCFF073YUF/@@download/ENCFF073YUF.bigBed hg19 released mixed read lengths, control low read depth, low read depth, low read length biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF284VUQ bed narrowPeak optimal idr thresholded peaks ENCSR000EGT ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour IRF1-human ENCAB000AHX DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF001TDO, ENCFF074NOU, ENCFF456MUP, ENCFF998DOG 247503 ENCODE Processing Pipeline c4f00a8ce99ea04dbc4ba77382440ed9 https://www.encodeproject.org/files/ENCFF284VUQ/@@download/ENCFF284VUQ.bed.gz hg19 released mixed read lengths, control low read depth, low read depth, low read length biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF999SXR bed narrowPeak conservative idr thresholded peaks ENCSR000EGT ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour IRF1-human ENCAB000AHX DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF001TDO, ENCFF074NOU, ENCFF456MUP, ENCFF998DOG 231538 ENCODE Processing Pipeline 40bd05402e8e663eab5009035c790bd8 https://www.encodeproject.org/files/ENCFF999SXR/@@download/ENCFF999SXR.bed.gz hg19 released mixed read lengths, control low read depth, low read depth, low read length biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF061GCD bam unfiltered alignments ENCSR000EGT ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour IRF1-human ENCAB000AHX DNA see document see document False 2011-10-29 ENCODE 2 27 ENCFF000YTB, ENCFF643CGH 704825912 ENCODE Processing Pipeline 6a9e2d42336bd12a5ae8efdbf03e12ad https://www.encodeproject.org/files/ENCFF061GCD/@@download/ENCFF061GCD.bam GRCh38 released mixed read lengths, control low read depth, low read depth, low read length biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF489YJG bam alignments ENCSR000EGT ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour IRF1-human ENCAB000AHX DNA see document see document False 2011-10-29 ENCODE 2 27 ENCFF000YTB, ENCFF643CGH 295652858 ENCODE Processing Pipeline 7031ee261d34a0181e90a8eb66233bc7 https://www.encodeproject.org/files/ENCFF489YJG/@@download/ENCFF489YJG.bam GRCh38 released mixed read lengths, control low read depth, low read depth, low read length biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF728WOA bam alignments ENCSR000EGT ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour IRF1-human ENCAB000AHX DNA see document see document False 2011-10-29 ENCODE 1 27 ENCFF000YSV, ENCFF643CGH 456102128 ENCODE Processing Pipeline 09abc70cbfdd32d6028c5613b7b1536f https://www.encodeproject.org/files/ENCFF728WOA/@@download/ENCFF728WOA.bam GRCh38 released mixed read lengths, control low read depth, low read depth, low read length biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF728IDI bam unfiltered alignments ENCSR000EGT ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour IRF1-human ENCAB000AHX DNA see document see document False 2011-10-29 ENCODE 1 27 ENCFF000YSV, ENCFF643CGH 838732509 ENCODE Processing Pipeline 65c0f07e44bbb2fd462eeaa71429804f https://www.encodeproject.org/files/ENCFF728IDI/@@download/ENCFF728IDI.bam GRCh38 released mixed read lengths, control low read depth, low read depth, low read length biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF176JCU bigWig signal p-value ENCSR000EGT ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour IRF1-human ENCAB000AHX DNA see document see document False 2011-10-29 ENCODE 1 ENCFF482LDC, ENCFF728WOA 286024466 ENCODE Processing Pipeline 9acfb7d4c8ef2254ccfb018b925ee4af https://www.encodeproject.org/files/ENCFF176JCU/@@download/ENCFF176JCU.bigWig GRCh38 released mixed read lengths, control low read depth, low read depth, low read length biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF319VZI bigWig signal p-value ENCSR000EGT ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour IRF1-human ENCAB000AHX DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF482LDC, ENCFF489YJG, ENCFF728WOA 282175648 ENCODE Processing Pipeline 46bc3f32c0bcfb90b0cec574c783b998 https://www.encodeproject.org/files/ENCFF319VZI/@@download/ENCFF319VZI.bigWig GRCh38 released mixed read lengths, control low read depth, low read depth, low read length biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF942NFJ bigWig signal p-value ENCSR000EGT ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour IRF1-human ENCAB000AHX DNA see document see document False 2011-10-29 ENCODE 2 ENCFF482LDC, ENCFF489YJG 251230440 ENCODE Processing Pipeline 0eb57766e8ef97b801e3029bf80c111e https://www.encodeproject.org/files/ENCFF942NFJ/@@download/ENCFF942NFJ.bigWig GRCh38 released mixed read lengths, control low read depth, low read depth, low read length biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF456MUP bed narrowPeak peaks ENCSR000EGT ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour IRF1-human ENCAB000AHX DNA see document see document False 2011-10-29 ENCODE 2 ENCFF331ARQ, ENCFF741YEW 2659144 ENCODE Processing Pipeline acdf1392520ee91f4bddbce05b2fea39 https://www.encodeproject.org/files/ENCFF456MUP/@@download/ENCFF456MUP.bed.gz hg19 released mixed read lengths, control low read depth, low read depth, low read length biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF524ALZ bigWig fold change over control ENCSR000EGT ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour IRF1-human ENCAB000AHX DNA see document see document False 2011-10-29 ENCODE 1 ENCFF482LDC, ENCFF728WOA 211402201 ENCODE Processing Pipeline 32e6e04f28c708e50e73e036aa1a7eb9 https://www.encodeproject.org/files/ENCFF524ALZ/@@download/ENCFF524ALZ.bigWig GRCh38 released mixed read lengths, control low read depth, low read depth, low read length biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF190DFR bigWig fold change over control ENCSR000EGT ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour IRF1-human ENCAB000AHX DNA see document see document False 2011-10-29 ENCODE 2 ENCFF482LDC, ENCFF489YJG 132947008 ENCODE Processing Pipeline bf637260f29c97879aba69b73668c1c7 https://www.encodeproject.org/files/ENCFF190DFR/@@download/ENCFF190DFR.bigWig GRCh38 released mixed read lengths, control low read depth, low read depth, low read length biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF176RYJ bigWig fold change over control ENCSR000EGT ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour IRF1-human ENCAB000AHX DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF482LDC, ENCFF489YJG, ENCFF728WOA 308432319 ENCODE Processing Pipeline 612141f0b43d5ef53fab71fd68b1e6a0 https://www.encodeproject.org/files/ENCFF176RYJ/@@download/ENCFF176RYJ.bigWig GRCh38 released mixed read lengths, control low read depth, low read depth, low read length biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF428TZB bed narrowPeak peaks ENCSR000EGT ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour IRF1-human ENCAB000AHX DNA see document see document False 2011-10-29 ENCODE 1 ENCFF482LDC, ENCFF728WOA 4385660 ENCODE Processing Pipeline 7642224d73455b2b97f72d1759ee99b3 https://www.encodeproject.org/files/ENCFF428TZB/@@download/ENCFF428TZB.bed.gz GRCh38 released mixed read lengths, control low read depth, low read depth, low read length biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF340RZZ bigBed narrowPeak peaks ENCSR000EGT ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour IRF1-human ENCAB000AHX DNA see document see document False 2011-10-29 ENCODE 1 ENCFF428TZB 10246983 ENCODE Processing Pipeline a7719ccb49bc53b0430d0297f4c119c1 https://www.encodeproject.org/files/ENCFF340RZZ/@@download/ENCFF340RZZ.bigBed GRCh38 released mixed read lengths, control low read depth, low read depth, low read length biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF938AOL bed narrowPeak peaks ENCSR000EGT ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour IRF1-human ENCAB000AHX DNA see document see document False 2011-10-29 ENCODE 2 ENCFF482LDC, ENCFF489YJG 2700348 ENCODE Processing Pipeline 7a0f21770434ac666ef4639d8aa36df9 https://www.encodeproject.org/files/ENCFF938AOL/@@download/ENCFF938AOL.bed.gz GRCh38 released mixed read lengths, control low read depth, low read depth, low read length biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF131WCK bed narrowPeak peaks ENCSR000EGT ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour IRF1-human ENCAB000AHX DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF482LDC, ENCFF489YJG, ENCFF728WOA 4734472 ENCODE Processing Pipeline cb3be48f1ec22b43ced5a0e81152e3ee https://www.encodeproject.org/files/ENCFF131WCK/@@download/ENCFF131WCK.bed.gz GRCh38 released mixed read lengths, control low read depth, low read depth, low read length biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF704NAF bigBed narrowPeak peaks ENCSR000EGT ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour IRF1-human ENCAB000AHX DNA see document see document False 2011-10-29 ENCODE 2 ENCFF938AOL 6373824 ENCODE Processing Pipeline 801a1f98bd3537e2b0e1815667169338 https://www.encodeproject.org/files/ENCFF704NAF/@@download/ENCFF704NAF.bigBed GRCh38 released mixed read lengths, control low read depth, low read depth, low read length biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF588XNN bigBed narrowPeak peaks ENCSR000EGT ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour IRF1-human ENCAB000AHX DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF131WCK 10604215 ENCODE Processing Pipeline 312357b3f9a33605e2aa15b2f0cecdfd https://www.encodeproject.org/files/ENCFF588XNN/@@download/ENCFF588XNN.bigBed GRCh38 released mixed read lengths, control low read depth, low read depth, low read length biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF593MBI bigBed narrowPeak conservative idr thresholded peaks ENCSR000EGT ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour IRF1-human ENCAB000AHX DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF548PPV 450873 ENCODE Processing Pipeline 8577059b07e45874530eedf5b83403f9 https://www.encodeproject.org/files/ENCFF593MBI/@@download/ENCFF593MBI.bigBed GRCh38 released mixed read lengths, control low read depth, low read depth, low read length biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF548PPV bed narrowPeak conservative idr thresholded peaks ENCSR000EGT ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour IRF1-human ENCAB000AHX DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF131WCK, ENCFF419RSJ, ENCFF428TZB, ENCFF938AOL 234167 ENCODE Processing Pipeline 2e839a708bb9f56ef306715c5cf9b3bb https://www.encodeproject.org/files/ENCFF548PPV/@@download/ENCFF548PPV.bed.gz GRCh38 released mixed read lengths, control low read depth, low read depth, low read length biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF346LMY bed narrowPeak optimal idr thresholded peaks ENCSR000EGT ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour IRF1-human ENCAB000AHX DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF131WCK, ENCFF419RSJ, ENCFF428TZB, ENCFF938AOL 251613 ENCODE Processing Pipeline 88bc01e2bc400f74f411b8459b4d70c6 https://www.encodeproject.org/files/ENCFF346LMY/@@download/ENCFF346LMY.bed.gz GRCh38 released mixed read lengths, control low read depth, low read depth, low read length biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF405KVS bigBed narrowPeak optimal idr thresholded peaks ENCSR000EGT ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 6.0 hour IRF1-human ENCAB000AHX DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF346LMY 474826 ENCODE Processing Pipeline e147ad804b61bd926d586d1263be1aec https://www.encodeproject.org/files/ENCFF405KVS/@@download/ENCFF405KVS.bigBed GRCh38 released mixed read lengths, control low read depth, low read depth, low read length biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF012ANG fastq reads ENCSR848AOP ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM22-human ENCAB476CFS DNA SDS formaldehyde False 2018-01-18 ENCODE 2 1 40 single-ended 457942205 Xiang-Dong Fu, UCSD a372cc8122ab59a3829371921960687c https://www.encodeproject.org/files/ENCFF012ANG/@@download/ENCFF012ANG.fastq.gz Illumina HiSeq 2000 /files/ENCFF363JFD/ released low read depth, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF710RJL fastq reads ENCSR848AOP ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM22-human ENCAB476CFS DNA SDS formaldehyde False 2018-01-18 ENCODE 1 1 40 single-ended 604543935 Xiang-Dong Fu, UCSD aaa29ff6b72cae48537761ac06df029e https://www.encodeproject.org/files/ENCFF710RJL/@@download/ENCFF710RJL.fastq.gz Illumina HiSeq 2000 /files/ENCFF577LLL/ released low read depth, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF654HVL fastq reads ENCSR848AOP ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM22-human ENCAB476CFS DNA SDS formaldehyde False 2018-01-18 ENCODE 1 1 40 single-ended 944388231 Xiang-Dong Fu, UCSD e24172deb1af4f634691536daa6129e4 https://www.encodeproject.org/files/ENCFF654HVL/@@download/ENCFF654HVL.fastq.gz Illumina HiSeq 2500 /files/ENCFF577LLL/ released low read depth, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF574RMG fastq reads ENCSR848AOP ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM22-human ENCAB476CFS DNA SDS formaldehyde False 2018-01-18 ENCODE 2 1 40 single-ended 966986424 Xiang-Dong Fu, UCSD 8304ee34e1c8539e950aab1b5adb66f9 https://www.encodeproject.org/files/ENCFF574RMG/@@download/ENCFF574RMG.fastq.gz Illumina HiSeq 2500 /files/ENCFF363JFD/ released low read depth, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF649DPF bam unfiltered alignments ENCSR848AOP ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM22-human ENCAB476CFS DNA SDS formaldehyde False 2018-01-18 ENCODE 2 40 ENCFF012ANG, ENCFF574RMG, ENCFF643CGH 1400561966 ENCODE Processing Pipeline 78b2e3175afc0a82c51cd545890633c0 https://www.encodeproject.org/files/ENCFF649DPF/@@download/ENCFF649DPF.bam GRCh38 released low read depth, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF804ZTV bam unfiltered alignments ENCSR848AOP ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM22-human ENCAB476CFS DNA SDS formaldehyde False 2018-01-18 ENCODE 2 40 ENCFF012ANG, ENCFF574RMG, ENCFF807MUK 1393397770 ENCODE Processing Pipeline 785cd0f9c1e388fa2ccfe7bda23559ce https://www.encodeproject.org/files/ENCFF804ZTV/@@download/ENCFF804ZTV.bam hg19 released low read depth, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF978OWP bam unfiltered alignments ENCSR848AOP ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM22-human ENCAB476CFS DNA SDS formaldehyde False 2018-01-18 ENCODE 1 40 ENCFF643CGH, ENCFF654HVL, ENCFF710RJL 1464185033 ENCODE Processing Pipeline 5c1075970b558d7c678f9e1d552cfd7a https://www.encodeproject.org/files/ENCFF978OWP/@@download/ENCFF978OWP.bam GRCh38 released low read depth, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF168WKB bam alignments ENCSR848AOP ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM22-human ENCAB476CFS DNA SDS formaldehyde False 2018-01-18 ENCODE 2 40 ENCFF012ANG, ENCFF574RMG, ENCFF643CGH 528383772 ENCODE Processing Pipeline e25dc9cb1446113c4d9e526fcd2721d3 https://www.encodeproject.org/files/ENCFF168WKB/@@download/ENCFF168WKB.bam GRCh38 released low read depth, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF956NBQ bam alignments ENCSR848AOP ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM22-human ENCAB476CFS DNA SDS formaldehyde False 2018-01-18 ENCODE 1 40 ENCFF643CGH, ENCFF654HVL, ENCFF710RJL 508378700 ENCODE Processing Pipeline 4698dbaec1c077c949671d1ee6f0dc7d https://www.encodeproject.org/files/ENCFF956NBQ/@@download/ENCFF956NBQ.bam GRCh38 released low read depth, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF441IWC bam alignments ENCSR848AOP ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM22-human ENCAB476CFS DNA SDS formaldehyde False 2018-01-18 ENCODE 2 40 ENCFF012ANG, ENCFF574RMG, ENCFF807MUK 529135936 ENCODE Processing Pipeline 14699a02e17fd9da66393dc5bff7b610 https://www.encodeproject.org/files/ENCFF441IWC/@@download/ENCFF441IWC.bam hg19 released low read depth, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF338SXL bam alignments ENCSR848AOP ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM22-human ENCAB476CFS DNA SDS formaldehyde False 2018-01-18 ENCODE 1 40 ENCFF654HVL, ENCFF710RJL, ENCFF807MUK 509197576 ENCODE Processing Pipeline 9ac538d7afd9a2cad6bb8b5974cc6f4f https://www.encodeproject.org/files/ENCFF338SXL/@@download/ENCFF338SXL.bam hg19 released low read depth, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF372LGG bam unfiltered alignments ENCSR848AOP ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM22-human ENCAB476CFS DNA SDS formaldehyde False 2018-01-18 ENCODE 1 40 ENCFF654HVL, ENCFF710RJL, ENCFF807MUK 1457872622 ENCODE Processing Pipeline ade9ae95fc281a56d8103b002d43e00f https://www.encodeproject.org/files/ENCFF372LGG/@@download/ENCFF372LGG.bam hg19 released low read depth, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF293FAW bigWig signal p-value ENCSR848AOP ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM22-human ENCAB476CFS DNA SDS formaldehyde False 2018-01-18 ENCODE 2 ENCFF168WKB, ENCFF906SAI 589885010 ENCODE Processing Pipeline 349b4aa5cbcc9136181cbaf8b05c0c48 https://www.encodeproject.org/files/ENCFF293FAW/@@download/ENCFF293FAW.bigWig GRCh38 released low read depth, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF963VYN bigWig signal p-value ENCSR848AOP ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM22-human ENCAB476CFS DNA SDS formaldehyde False 2018-01-18 ENCODE 1 ENCFF120YSP, ENCFF956NBQ 558847138 ENCODE Processing Pipeline 3327820da38af6bf4cd26d1eb5e14955 https://www.encodeproject.org/files/ENCFF963VYN/@@download/ENCFF963VYN.bigWig GRCh38 released low read depth, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF282KTO bigWig fold change over control ENCSR848AOP ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM22-human ENCAB476CFS DNA SDS formaldehyde False 2018-01-18 ENCODE 1 ENCFF120YSP, ENCFF956NBQ 419462254 ENCODE Processing Pipeline d653c54539ec7604770c0a7bdde5097d https://www.encodeproject.org/files/ENCFF282KTO/@@download/ENCFF282KTO.bigWig GRCh38 released low read depth, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF441VVM bigWig signal p-value ENCSR848AOP ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM22-human ENCAB476CFS DNA SDS formaldehyde False 2018-01-18 ENCODE 1, 2 ENCFF120YSP, ENCFF168WKB, ENCFF906SAI, ENCFF956NBQ 1109045004 ENCODE Processing Pipeline e28307e2bb790acbf1ec7e5cf3594a81 https://www.encodeproject.org/files/ENCFF441VVM/@@download/ENCFF441VVM.bigWig GRCh38 released low read depth, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF810GRV bigWig fold change over control ENCSR848AOP ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM22-human ENCAB476CFS DNA SDS formaldehyde False 2018-01-18 ENCODE 2 ENCFF168WKB, ENCFF906SAI 444198506 ENCODE Processing Pipeline c73651d7bdf9d7f32baf6df5902abc0c https://www.encodeproject.org/files/ENCFF810GRV/@@download/ENCFF810GRV.bigWig GRCh38 released low read depth, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF972DIH bed narrowPeak peaks ENCSR848AOP ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM22-human ENCAB476CFS DNA SDS formaldehyde False 2018-01-18 ENCODE 2 ENCFF168WKB, ENCFF906SAI 6380232 ENCODE Processing Pipeline 7ea38219d558af654a619477756e93de https://www.encodeproject.org/files/ENCFF972DIH/@@download/ENCFF972DIH.bed.gz GRCh38 released low read depth, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF072GUA bigBed narrowPeak peaks ENCSR848AOP ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM22-human ENCAB476CFS DNA SDS formaldehyde False 2018-01-18 ENCODE 1, 2 ENCFF617QJI 12299494 ENCODE Processing Pipeline 110425530eeb53332527ca23333ae43c https://www.encodeproject.org/files/ENCFF072GUA/@@download/ENCFF072GUA.bigBed GRCh38 released low read depth, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF553XIO bigBed narrowPeak conservative idr thresholded peaks ENCSR848AOP ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM22-human ENCAB476CFS DNA SDS formaldehyde False 2018-01-18 ENCODE 1, 2 ENCFF678EKM 435930 ENCODE Processing Pipeline 5126b0b1871a813aed6d17b0eef17543 https://www.encodeproject.org/files/ENCFF553XIO/@@download/ENCFF553XIO.bigBed GRCh38 released low read depth, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF420IBN bed narrowPeak optimal idr thresholded peaks ENCSR848AOP ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM22-human ENCAB476CFS DNA SDS formaldehyde False 2018-01-18 ENCODE 1, 2 ENCFF419RSJ, ENCFF617QJI, ENCFF949SRR, ENCFF972DIH 231329 ENCODE Processing Pipeline e006128fc8065cc3557cc761c668a519 https://www.encodeproject.org/files/ENCFF420IBN/@@download/ENCFF420IBN.bed.gz GRCh38 released low read depth, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF219AMK bigBed narrowPeak peaks ENCSR848AOP ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM22-human ENCAB476CFS DNA SDS formaldehyde False 2018-01-18 ENCODE 2 ENCFF972DIH 12802702 ENCODE Processing Pipeline 9c617495d578cf49ac4f0490f3781cc6 https://www.encodeproject.org/files/ENCFF219AMK/@@download/ENCFF219AMK.bigBed GRCh38 released low read depth, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF420JDS bigBed narrowPeak optimal idr thresholded peaks ENCSR848AOP ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM22-human ENCAB476CFS DNA SDS formaldehyde False 2018-01-18 ENCODE 1, 2 ENCFF420IBN 552588 ENCODE Processing Pipeline 6a41a04c835022e88cfcfdfe82f3d383 https://www.encodeproject.org/files/ENCFF420JDS/@@download/ENCFF420JDS.bigBed GRCh38 released low read depth, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF386VOI bigWig fold change over control ENCSR848AOP ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM22-human ENCAB476CFS DNA SDS formaldehyde False 2018-01-18 ENCODE 1, 2 ENCFF120YSP, ENCFF168WKB, ENCFF906SAI, ENCFF956NBQ 994573682 ENCODE Processing Pipeline 2247b4421042fb8a1cd4066af35952ca https://www.encodeproject.org/files/ENCFF386VOI/@@download/ENCFF386VOI.bigWig GRCh38 released low read depth, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF104YLW bigBed narrowPeak peaks ENCSR848AOP ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM22-human ENCAB476CFS DNA SDS formaldehyde False 2018-01-18 ENCODE 1 ENCFF949SRR 12488249 ENCODE Processing Pipeline 860dc52473ec59941d3fb775543273bc https://www.encodeproject.org/files/ENCFF104YLW/@@download/ENCFF104YLW.bigBed GRCh38 released low read depth, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF678EKM bed narrowPeak conservative idr thresholded peaks ENCSR848AOP ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM22-human ENCAB476CFS DNA SDS formaldehyde False 2018-01-18 ENCODE 1, 2 ENCFF419RSJ, ENCFF617QJI, ENCFF949SRR, ENCFF972DIH 165685 ENCODE Processing Pipeline ccae1e69da173b7291f011acfa487661 https://www.encodeproject.org/files/ENCFF678EKM/@@download/ENCFF678EKM.bed.gz GRCh38 released low read depth, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF949SRR bed narrowPeak peaks ENCSR848AOP ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM22-human ENCAB476CFS DNA SDS formaldehyde False 2018-01-18 ENCODE 1 ENCFF120YSP, ENCFF956NBQ 6525892 ENCODE Processing Pipeline 4dcfc58b54e8cbf9752e2d0793f472dc https://www.encodeproject.org/files/ENCFF949SRR/@@download/ENCFF949SRR.bed.gz GRCh38 released low read depth, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF617QJI bed narrowPeak peaks ENCSR848AOP ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM22-human ENCAB476CFS DNA SDS formaldehyde False 2018-01-18 ENCODE 1, 2 ENCFF120YSP, ENCFF168WKB, ENCFF906SAI, ENCFF956NBQ 7122894 ENCODE Processing Pipeline fbe55ce77a38aed3563459afb9782ee4 https://www.encodeproject.org/files/ENCFF617QJI/@@download/ENCFF617QJI.bed.gz GRCh38 released low read depth, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF800JHC bigWig signal p-value ENCSR848AOP ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM22-human ENCAB476CFS DNA SDS formaldehyde False 2018-01-18 ENCODE 1 ENCFF338SXL, ENCFF493QSH 634163961 ENCODE Processing Pipeline 7f3f1890cd94c58fec69e9e79fdaae15 https://www.encodeproject.org/files/ENCFF800JHC/@@download/ENCFF800JHC.bigWig hg19 released low read depth, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF717MVB bigWig fold change over control ENCSR848AOP ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM22-human ENCAB476CFS DNA SDS formaldehyde False 2018-01-18 ENCODE 1 ENCFF338SXL, ENCFF493QSH 420190912 ENCODE Processing Pipeline 196925cbcd89fe92488a4f1c244567a3 https://www.encodeproject.org/files/ENCFF717MVB/@@download/ENCFF717MVB.bigWig hg19 released low read depth, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF361TRC bigWig signal p-value ENCSR848AOP ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM22-human ENCAB476CFS DNA SDS formaldehyde False 2018-01-18 ENCODE 2 ENCFF441IWC, ENCFF641CEP 642763593 ENCODE Processing Pipeline f948b72b93c29f8dbf45dac40fcdad70 https://www.encodeproject.org/files/ENCFF361TRC/@@download/ENCFF361TRC.bigWig hg19 released low read depth, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF072MHF bed narrowPeak peaks ENCSR848AOP ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM22-human ENCAB476CFS DNA SDS formaldehyde False 2018-01-18 ENCODE 1, 2 ENCFF338SXL, ENCFF441IWC, ENCFF493QSH, ENCFF641CEP 7139944 ENCODE Processing Pipeline 0272228c7a5f6716852945bc3a7c0566 https://www.encodeproject.org/files/ENCFF072MHF/@@download/ENCFF072MHF.bed.gz hg19 released low read depth, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF640DDR bigBed narrowPeak peaks ENCSR848AOP ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM22-human ENCAB476CFS DNA SDS formaldehyde False 2018-01-18 ENCODE 1 ENCFF051SGG 12478232 ENCODE Processing Pipeline f869970653db1d7dfa5e4acd5f3c26ad https://www.encodeproject.org/files/ENCFF640DDR/@@download/ENCFF640DDR.bigBed hg19 released low read depth, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF051YGP bigWig signal p-value ENCSR848AOP ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM22-human ENCAB476CFS DNA SDS formaldehyde False 2018-01-18 ENCODE 1, 2 ENCFF338SXL, ENCFF441IWC, ENCFF493QSH, ENCFF641CEP 1042479138 ENCODE Processing Pipeline 43e67359c8b994dc88776637d2a61d1b https://www.encodeproject.org/files/ENCFF051YGP/@@download/ENCFF051YGP.bigWig hg19 released low read depth, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF411ILS bigWig fold change over control ENCSR848AOP ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM22-human ENCAB476CFS DNA SDS formaldehyde False 2018-01-18 ENCODE 1, 2 ENCFF338SXL, ENCFF441IWC, ENCFF493QSH, ENCFF641CEP 996806863 ENCODE Processing Pipeline f94c1205ad746ca49b03f26ebb9f5509 https://www.encodeproject.org/files/ENCFF411ILS/@@download/ENCFF411ILS.bigWig hg19 released low read depth, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF823POC bigWig fold change over control ENCSR848AOP ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM22-human ENCAB476CFS DNA SDS formaldehyde False 2018-01-18 ENCODE 2 ENCFF441IWC, ENCFF641CEP 444960188 ENCODE Processing Pipeline 5546e498e2506e8b5faac75c1b3ab95f https://www.encodeproject.org/files/ENCFF823POC/@@download/ENCFF823POC.bigWig hg19 released low read depth, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF051SGG bed narrowPeak peaks ENCSR848AOP ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM22-human ENCAB476CFS DNA SDS formaldehyde False 2018-01-18 ENCODE 1 ENCFF338SXL, ENCFF493QSH 6526722 ENCODE Processing Pipeline 286f34882824089be1fb41559efb60cb https://www.encodeproject.org/files/ENCFF051SGG/@@download/ENCFF051SGG.bed.gz hg19 released low read depth, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF314NQZ bed narrowPeak peaks ENCSR848AOP ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM22-human ENCAB476CFS DNA SDS formaldehyde False 2018-01-18 ENCODE 2 ENCFF441IWC, ENCFF641CEP 6331282 ENCODE Processing Pipeline 12d3e1e4d51ac0d211ec5ef5685053da https://www.encodeproject.org/files/ENCFF314NQZ/@@download/ENCFF314NQZ.bed.gz hg19 released low read depth, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF522JUV bed narrowPeak optimal idr thresholded peaks ENCSR848AOP ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM22-human ENCAB476CFS DNA SDS formaldehyde False 2018-01-18 ENCODE 1, 2 ENCFF001TDO, ENCFF051SGG, ENCFF072MHF, ENCFF314NQZ 223615 ENCODE Processing Pipeline 2b8bc5c99e97baca5a929efe0fafee86 https://www.encodeproject.org/files/ENCFF522JUV/@@download/ENCFF522JUV.bed.gz hg19 released low read depth, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF302NZN bigBed narrowPeak peaks ENCSR848AOP ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM22-human ENCAB476CFS DNA SDS formaldehyde False 2018-01-18 ENCODE 1, 2 ENCFF072MHF 12331754 ENCODE Processing Pipeline b42f4b5058059074a3f919ee50f5e110 https://www.encodeproject.org/files/ENCFF302NZN/@@download/ENCFF302NZN.bigBed hg19 released low read depth, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF648TYH bigBed narrowPeak optimal idr thresholded peaks ENCSR848AOP ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM22-human ENCAB476CFS DNA SDS formaldehyde False 2018-01-18 ENCODE 1, 2 ENCFF522JUV 537189 ENCODE Processing Pipeline 322130f80dde074c996bd235442784f9 https://www.encodeproject.org/files/ENCFF648TYH/@@download/ENCFF648TYH.bigBed hg19 released low read depth, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF270GDQ bigBed narrowPeak peaks ENCSR848AOP ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM22-human ENCAB476CFS DNA SDS formaldehyde False 2018-01-18 ENCODE 2 ENCFF314NQZ 12729865 ENCODE Processing Pipeline e2f04ab2a2cd823c1726bcff61f9b117 https://www.encodeproject.org/files/ENCFF270GDQ/@@download/ENCFF270GDQ.bigBed hg19 released low read depth, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF301USB bed narrowPeak conservative idr thresholded peaks ENCSR848AOP ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM22-human ENCAB476CFS DNA SDS formaldehyde False 2018-01-18 ENCODE 1, 2 ENCFF001TDO, ENCFF051SGG, ENCFF072MHF, ENCFF314NQZ 167884 ENCODE Processing Pipeline dd963a659a1c6393a8cbc0bd216b8be1 https://www.encodeproject.org/files/ENCFF301USB/@@download/ENCFF301USB.bed.gz hg19 released low read depth, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF982EHX bigBed narrowPeak conservative idr thresholded peaks ENCSR848AOP ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM22-human ENCAB476CFS DNA SDS formaldehyde False 2018-01-18 ENCODE 1, 2 ENCFF301USB 439420 ENCODE Processing Pipeline f7c60cb42d6939499d5e2fa4e909d31d https://www.encodeproject.org/files/ENCFF982EHX/@@download/ENCFF982EHX.bigBed hg19 released low read depth, low read length experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF000QGB bam alignments ENCSR000BNW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIX5-human ENCAB000AKV DNA see document see document False 2011-07-18 ENCODE 1 ENCFF000QGQ 1034304385 Richard Myers, HAIB e2a4864c92b7f58ac49a4435bdcdd634 https://www.encodeproject.org/files/ENCFF000QGB/@@download/ENCFF000QGB.bam hg19 archived borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF000QGC bigBed broadPeak peaks ENCSR000BNW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIX5-human ENCAB000AKV DNA see document see document False 2011-07-18 ENCODE 1 1 ENCFF001ULD 66537 Richard Myers, HAIB c3242243dbfb6c2a23135d91c694192b https://www.encodeproject.org/files/ENCFF000QGC/@@download/ENCFF000QGC.bigBed hg19 archived borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF000QGD bigBed broadPeak peaks ENCSR000BNW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIX5-human ENCAB000AKV DNA see document see document False 2011-07-18 ENCODE 2 1 ENCFF001ULE 172921 Richard Myers, HAIB 136794fbe5c47545f18fb31c146cc2a6 https://www.encodeproject.org/files/ENCFF000QGD/@@download/ENCFF000QGD.bigBed hg19 archived borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF000QGE bam alignments ENCSR000BNW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIX5-human ENCAB000AKV DNA see document see document False 2011-07-18 ENCODE 2 ENCFF000QGN 363932617 Richard Myers, HAIB 02a526126c4c7670f80f74f491a67468 https://www.encodeproject.org/files/ENCFF000QGE/@@download/ENCFF000QGE.bam hg19 archived borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF000QGF bigWig raw signal ENCSR000BNW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIX5-human ENCAB000AKV DNA see document see document False 2011-07-18 ENCODE 1 1 4020754 Richard Myers, HAIB 937a9c711b62943e1218d8051d48ae1c https://www.encodeproject.org/files/ENCFF000QGF/@@download/ENCFF000QGF.bigWig hg19 archived borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample, missing derived_from insufficient read depth ENCFF000QGH bigWig raw signal ENCSR000BNW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIX5-human ENCAB000AKV DNA see document see document False 2011-07-18 ENCODE 2 1 4435726 Richard Myers, HAIB a79c0776ca2a0ab099eb0b0f72afdced https://www.encodeproject.org/files/ENCFF000QGH/@@download/ENCFF000QGH.bigWig hg19 archived borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample, missing derived_from insufficient read depth ENCFF000QGN fastq reads ENCSR000BNW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIX5-human ENCAB000AKV DNA see document see document False 2011-07-18 ENCODE 2 1 36 single-ended 353446396 Richard Myers, HAIB 70b6a0d835efbc73998c417acf047045 https://www.encodeproject.org/files/ENCFF000QGN/@@download/ENCFF000QGN.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000QEZ/ released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF000QGQ fastq reads ENCSR000BNW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIX5-human ENCAB000AKV DNA see document see document False 2011-07-18 ENCODE 1 1 36 single-ended 947796572 Richard Myers, HAIB 357bbbe57c8b6eecacdf1d4199fc4d03 https://www.encodeproject.org/files/ENCFF000QGQ/@@download/ENCFF000QGQ.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000QEX/ released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF001ULD bed broadPeak peaks ENCSR000BNW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIX5-human ENCAB000AKV DNA see document see document False 2011-07-18 ENCODE 1 1 13516 Richard Myers, HAIB e8c341b2125d2fe5ab3407ac204d73a4 https://www.encodeproject.org/files/ENCFF001ULD/@@download/ENCFF001ULD.bed.gz hg19 archived borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample, missing derived_from insufficient read depth ENCFF001ULE bed broadPeak peaks ENCSR000BNW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIX5-human ENCAB000AKV DNA see document see document False 2011-07-18 ENCODE 2 1 70059 Richard Myers, HAIB 947259a6b1a6f24d9fbfc54720926fd0 https://www.encodeproject.org/files/ENCFF001ULE/@@download/ENCFF001ULE.bed.gz hg19 archived borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample, missing derived_from insufficient read depth ENCFF882JQN bam alignments ENCSR000BNW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIX5-human ENCAB000AKV DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000QGN, ENCFF807MUK 213708414 ENCODE Processing Pipeline 2dbe6ff4702842a1a5052cdcff6f52df https://www.encodeproject.org/files/ENCFF882JQN/@@download/ENCFF882JQN.bam hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF122HCH bam unfiltered alignments ENCSR000BNW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIX5-human ENCAB000AKV DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000QGN, ENCFF807MUK 424775631 ENCODE Processing Pipeline 5a50e611f2235109774c054af8e900a3 https://www.encodeproject.org/files/ENCFF122HCH/@@download/ENCFF122HCH.bam hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF798THM bam unfiltered alignments ENCSR000BNW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIX5-human ENCAB000AKV DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000QGQ, ENCFF807MUK 1220682488 ENCODE Processing Pipeline 0306fb00a464403a5e8ee39c2875d742 https://www.encodeproject.org/files/ENCFF798THM/@@download/ENCFF798THM.bam hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF037BXU bam alignments ENCSR000BNW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIX5-human ENCAB000AKV DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000QGQ, ENCFF807MUK 817437214 ENCODE Processing Pipeline 98ac12c407f364c15953b862f5527a53 https://www.encodeproject.org/files/ENCFF037BXU/@@download/ENCFF037BXU.bam hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF447EAV bam unfiltered alignments ENCSR000BNW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIX5-human ENCAB000AKV DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000QGN, ENCFF643CGH 425480616 ENCODE Processing Pipeline 5d6b527c169a4de225d919ddf187c66c https://www.encodeproject.org/files/ENCFF447EAV/@@download/ENCFF447EAV.bam GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF975VMQ bam unfiltered alignments ENCSR000BNW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIX5-human ENCAB000AKV DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000QGQ, ENCFF643CGH 1223413566 ENCODE Processing Pipeline 4e8061bf2ceb9457a5d0ada21697a864 https://www.encodeproject.org/files/ENCFF975VMQ/@@download/ENCFF975VMQ.bam GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF331BZT bam alignments ENCSR000BNW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIX5-human ENCAB000AKV DNA see document see document False 2011-07-18 ENCODE 1 36 ENCFF000QGQ, ENCFF643CGH 816973410 ENCODE Processing Pipeline ad615c734bfa775212b8b879156d577c https://www.encodeproject.org/files/ENCFF331BZT/@@download/ENCFF331BZT.bam GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF584HKJ bam alignments ENCSR000BNW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIX5-human ENCAB000AKV DNA see document see document False 2011-07-18 ENCODE 2 36 ENCFF000QGN, ENCFF643CGH 213561783 ENCODE Processing Pipeline 0df6e10f43a11b0d1fa3fe7ce4420b43 https://www.encodeproject.org/files/ENCFF584HKJ/@@download/ENCFF584HKJ.bam GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF132KHU bigWig fold change over control ENCSR000BNW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIX5-human ENCAB000AKV DNA see document see document False 2011-07-18 ENCODE 2 ENCFF235CSW, ENCFF750MIM, ENCFF882JQN 147552243 ENCODE Processing Pipeline afcac5cce3799208a62e175ea8d36f56 https://www.encodeproject.org/files/ENCFF132KHU/@@download/ENCFF132KHU.bigWig hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF521MOS bed narrowPeak peaks ENCSR000BNW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIX5-human ENCAB000AKV DNA see document see document False 2011-07-18 ENCODE 1 ENCFF037BXU, ENCFF235CSW, ENCFF750MIM 4142355 ENCODE Processing Pipeline 585df9f882884542d2162608818d81f2 https://www.encodeproject.org/files/ENCFF521MOS/@@download/ENCFF521MOS.bed.gz hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF066ONU bed narrowPeak peaks ENCSR000BNW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIX5-human ENCAB000AKV DNA see document see document False 2011-07-18 ENCODE 2 ENCFF235CSW, ENCFF750MIM, ENCFF882JQN 1856755 ENCODE Processing Pipeline 14200e538b452e7bd169c4e2b53985d9 https://www.encodeproject.org/files/ENCFF066ONU/@@download/ENCFF066ONU.bed.gz hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF159FEQ bigWig signal p-value ENCSR000BNW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIX5-human ENCAB000AKV DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF037BXU, ENCFF235CSW, ENCFF750MIM, ENCFF882JQN 554208476 ENCODE Processing Pipeline 567849b363345bf98fef590b2a0a6613 https://www.encodeproject.org/files/ENCFF159FEQ/@@download/ENCFF159FEQ.bigWig hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF925ZXV bigWig fold change over control ENCSR000BNW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIX5-human ENCAB000AKV DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF037BXU, ENCFF235CSW, ENCFF750MIM, ENCFF882JQN 524903474 ENCODE Processing Pipeline 3ffc512294f3e569dbbfcb34a0a35285 https://www.encodeproject.org/files/ENCFF925ZXV/@@download/ENCFF925ZXV.bigWig hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF156JZC bigWig signal p-value ENCSR000BNW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIX5-human ENCAB000AKV DNA see document see document False 2011-07-18 ENCODE 1 ENCFF037BXU, ENCFF235CSW, ENCFF750MIM 460370330 ENCODE Processing Pipeline afd19f0d8a598b0fcea80cc1b952f8b4 https://www.encodeproject.org/files/ENCFF156JZC/@@download/ENCFF156JZC.bigWig hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF532UAI bigWig signal p-value ENCSR000BNW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIX5-human ENCAB000AKV DNA see document see document False 2011-07-18 ENCODE 2 ENCFF235CSW, ENCFF750MIM, ENCFF882JQN 354267903 ENCODE Processing Pipeline b61aa107ff0ae0f60ff9110b582d7776 https://www.encodeproject.org/files/ENCFF532UAI/@@download/ENCFF532UAI.bigWig hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF869HHY bigWig fold change over control ENCSR000BNW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIX5-human ENCAB000AKV DNA see document see document False 2011-07-18 ENCODE 1 ENCFF037BXU, ENCFF235CSW, ENCFF750MIM 421377279 ENCODE Processing Pipeline b70617e515668541493a75ceb7bea075 https://www.encodeproject.org/files/ENCFF869HHY/@@download/ENCFF869HHY.bigWig hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF738BIG bed narrowPeak peaks ENCSR000BNW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIX5-human ENCAB000AKV DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF037BXU, ENCFF235CSW, ENCFF750MIM, ENCFF882JQN 4610777 ENCODE Processing Pipeline 512ab31f7689df6e2e25d6ab153dd82b https://www.encodeproject.org/files/ENCFF738BIG/@@download/ENCFF738BIG.bed.gz hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF210ZAD bigBed narrowPeak peaks ENCSR000BNW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIX5-human ENCAB000AKV DNA see document see document False 2011-07-18 ENCODE 1 ENCFF521MOS 10716873 ENCODE Processing Pipeline 31d751ffb046abb54ea787e444aa2951 https://www.encodeproject.org/files/ENCFF210ZAD/@@download/ENCFF210ZAD.bigBed hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF276CVA bigBed narrowPeak peaks ENCSR000BNW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIX5-human ENCAB000AKV DNA see document see document False 2011-07-18 ENCODE 2 ENCFF066ONU 4132751 ENCODE Processing Pipeline 0699f128a11a625327164a5fc1d419d6 https://www.encodeproject.org/files/ENCFF276CVA/@@download/ENCFF276CVA.bigBed hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF077HFR bigBed narrowPeak peaks ENCSR000BNW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIX5-human ENCAB000AKV DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF738BIG 11034124 ENCODE Processing Pipeline 773ba2104a8662238ca72551393e40c4 https://www.encodeproject.org/files/ENCFF077HFR/@@download/ENCFF077HFR.bigBed hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF221LXI bigBed narrowPeak conservative idr thresholded peaks ENCSR000BNW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIX5-human ENCAB000AKV DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF615QOD 109039 ENCODE Processing Pipeline 4a54cbf898c147cc26d86ea66db3392d https://www.encodeproject.org/files/ENCFF221LXI/@@download/ENCFF221LXI.bigBed hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF785HDY bigBed narrowPeak optimal idr thresholded peaks ENCSR000BNW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIX5-human ENCAB000AKV DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF033EBX 172518 ENCODE Processing Pipeline ac9527ac2cf07031564ead121ca00188 https://www.encodeproject.org/files/ENCFF785HDY/@@download/ENCFF785HDY.bigBed hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF615QOD bed narrowPeak conservative idr thresholded peaks ENCSR000BNW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIX5-human ENCAB000AKV DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF001TDO, ENCFF066ONU, ENCFF521MOS, ENCFF738BIG 36527 ENCODE Processing Pipeline ecaec6d806ebba5fc4d05c9511f6de09 https://www.encodeproject.org/files/ENCFF615QOD/@@download/ENCFF615QOD.bed.gz hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF033EBX bed narrowPeak optimal idr thresholded peaks ENCSR000BNW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIX5-human ENCAB000AKV DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF001TDO, ENCFF066ONU, ENCFF521MOS, ENCFF738BIG 62476 ENCODE Processing Pipeline 097bf841440b7b7f1ef9cb01097fd511 https://www.encodeproject.org/files/ENCFF033EBX/@@download/ENCFF033EBX.bed.gz hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF177MBE bed narrowPeak peaks ENCSR000BNW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIX5-human ENCAB000AKV DNA see document see document False 2011-07-18 ENCODE 2 ENCFF584HKJ, ENCFF772PJM, ENCFF982BHL 1853408 ENCODE Processing Pipeline 6802e30d0f702fd8e080e71bed9e6948 https://www.encodeproject.org/files/ENCFF177MBE/@@download/ENCFF177MBE.bed.gz GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF089KFY bigBed narrowPeak peaks ENCSR000BNW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIX5-human ENCAB000AKV DNA see document see document False 2011-07-18 ENCODE 2 ENCFF177MBE 4129064 ENCODE Processing Pipeline 1b9593a9849a7df78002795e505fecb3 https://www.encodeproject.org/files/ENCFF089KFY/@@download/ENCFF089KFY.bigBed GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF247LOF bed narrowPeak optimal idr thresholded peaks ENCSR000BNW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIX5-human ENCAB000AKV DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF123WWM, ENCFF177MBE, ENCFF419RSJ, ENCFF714RFQ 60929 ENCODE Processing Pipeline 58e643a89b9cf4aa01de67366da4a9be https://www.encodeproject.org/files/ENCFF247LOF/@@download/ENCFF247LOF.bed.gz GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF403VLX bigWig signal p-value ENCSR000BNW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIX5-human ENCAB000AKV DNA see document see document False 2011-07-18 ENCODE 1 ENCFF331BZT, ENCFF772PJM, ENCFF982BHL 551764967 ENCODE Processing Pipeline 1b0535fb4b9bfcc48a906bf751e3f668 https://www.encodeproject.org/files/ENCFF403VLX/@@download/ENCFF403VLX.bigWig GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF092ZVO bigWig signal p-value ENCSR000BNW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIX5-human ENCAB000AKV DNA see document see document False 2011-07-18 ENCODE 2 ENCFF584HKJ, ENCFF772PJM, ENCFF982BHL 412493701 ENCODE Processing Pipeline c01677b31526c5faeee58057842f3e97 https://www.encodeproject.org/files/ENCFF092ZVO/@@download/ENCFF092ZVO.bigWig GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF303WVD bigWig fold change over control ENCSR000BNW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIX5-human ENCAB000AKV DNA see document see document False 2011-07-18 ENCODE 2 ENCFF584HKJ, ENCFF772PJM, ENCFF982BHL 147008602 ENCODE Processing Pipeline 918164b7f04dfd95af08d88bd1379b67 https://www.encodeproject.org/files/ENCFF303WVD/@@download/ENCFF303WVD.bigWig GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF587UWR bigBed narrowPeak optimal idr thresholded peaks ENCSR000BNW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIX5-human ENCAB000AKV DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF247LOF 141467 ENCODE Processing Pipeline 09fab6d1653b393aa5a5b16ad86c53dc https://www.encodeproject.org/files/ENCFF587UWR/@@download/ENCFF587UWR.bigBed GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF080COA bigWig signal p-value ENCSR000BNW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIX5-human ENCAB000AKV DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF331BZT, ENCFF584HKJ, ENCFF772PJM, ENCFF982BHL 523728649 ENCODE Processing Pipeline 5102bff166ec960622a2c1de8cc44c77 https://www.encodeproject.org/files/ENCFF080COA/@@download/ENCFF080COA.bigWig GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF593FWV bed narrowPeak conservative idr thresholded peaks ENCSR000BNW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIX5-human ENCAB000AKV DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF123WWM, ENCFF177MBE, ENCFF419RSJ, ENCFF714RFQ 36439 ENCODE Processing Pipeline c4ec33d07bf8e46483c6d78b023c6dd9 https://www.encodeproject.org/files/ENCFF593FWV/@@download/ENCFF593FWV.bed.gz GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF210EHW bigBed narrowPeak conservative idr thresholded peaks ENCSR000BNW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIX5-human ENCAB000AKV DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF593FWV 109388 ENCODE Processing Pipeline d523c073b9620d7c9f8d94c3674cdac0 https://www.encodeproject.org/files/ENCFF210EHW/@@download/ENCFF210EHW.bigBed GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF123WWM bed narrowPeak peaks ENCSR000BNW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIX5-human ENCAB000AKV DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF331BZT, ENCFF584HKJ, ENCFF772PJM, ENCFF982BHL 4599842 ENCODE Processing Pipeline fe2457bee3098b4961af1403df69948d https://www.encodeproject.org/files/ENCFF123WWM/@@download/ENCFF123WWM.bed.gz GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF852OMW bigWig fold change over control ENCSR000BNW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIX5-human ENCAB000AKV DNA see document see document False 2011-07-18 ENCODE 1 ENCFF331BZT, ENCFF772PJM, ENCFF982BHL 421506534 ENCODE Processing Pipeline 3e26319d2086a3e838a7b3c05cf04595 https://www.encodeproject.org/files/ENCFF852OMW/@@download/ENCFF852OMW.bigWig GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF619NSR bigWig fold change over control ENCSR000BNW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIX5-human ENCAB000AKV DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF331BZT, ENCFF584HKJ, ENCFF772PJM, ENCFF982BHL 506357232 ENCODE Processing Pipeline ea7d68a7899e9e7f8f987ca47a7dc931 https://www.encodeproject.org/files/ENCFF619NSR/@@download/ENCFF619NSR.bigWig GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF714RFQ bed narrowPeak peaks ENCSR000BNW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIX5-human ENCAB000AKV DNA see document see document False 2011-07-18 ENCODE 1 ENCFF331BZT, ENCFF772PJM, ENCFF982BHL 4138309 ENCODE Processing Pipeline 2fb0653961f0ac954538b731da4319ae https://www.encodeproject.org/files/ENCFF714RFQ/@@download/ENCFF714RFQ.bed.gz GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF071JUJ bigBed narrowPeak peaks ENCSR000BNW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIX5-human ENCAB000AKV DNA see document see document False 2011-07-18 ENCODE 1 ENCFF714RFQ 10722308 ENCODE Processing Pipeline 5f2ad87465879810dfadf307cb4f67a1 https://www.encodeproject.org/files/ENCFF071JUJ/@@download/ENCFF071JUJ.bigBed GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF633MBZ bigBed narrowPeak peaks ENCSR000BNW ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIX5-human ENCAB000AKV DNA see document see document False 2011-07-18 ENCODE 1, 2 ENCFF123WWM 11022914 ENCODE Processing Pipeline fdd71968f0e4062bcce7575e89b07a46 https://www.encodeproject.org/files/ENCFF633MBZ/@@download/ENCFF633MBZ.bigBed GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample insufficient read depth ENCFF097GJA fastq reads ENCSR178DEG ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NR2C1-human ENCAB728YTO DNA False 2017-01-31 ENCODE 1 1 100 paired-ended 2 ENCFF060XCR 888067411 Michael Snyder, Stanford 3a707aa56e523d0c2c85d99ce43e4105 https://www.encodeproject.org/files/ENCFF097GJA/@@download/ENCFF097GJA.fastq.gz Illumina HiSeq 2000 /files/ENCFF849TLD/ archived inconsistent platforms, missing genetic modification characterization, mild to moderate bottlenecking ENCFF060XCR fastq reads ENCSR178DEG ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NR2C1-human ENCAB728YTO DNA False 2017-01-31 ENCODE 1 1 100 paired-ended 1 ENCFF097GJA 847623319 Michael Snyder, Stanford 84cf9d6d4e01437545c2e9c2da03abda https://www.encodeproject.org/files/ENCFF060XCR/@@download/ENCFF060XCR.fastq.gz Illumina HiSeq 2000 /files/ENCFF096CKY/ archived inconsistent platforms, missing genetic modification characterization, mild to moderate bottlenecking ENCFF865YLR fastq reads ENCSR178DEG ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NR2C1-human ENCAB728YTO DNA False 2017-01-31 ENCODE 2 1 100 paired-ended 2 ENCFF845UZE 1946745839 Michael Snyder, Stanford 36c7143c1fa22befa880df869496f1b5 https://www.encodeproject.org/files/ENCFF865YLR/@@download/ENCFF865YLR.fastq.gz Illumina HiSeq 2000 /files/ENCFF849TLD/ archived inconsistent platforms, missing genetic modification characterization, mild to moderate bottlenecking ENCFF845UZE fastq reads ENCSR178DEG ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NR2C1-human ENCAB728YTO DNA False 2017-01-31 ENCODE 2 1 100 paired-ended 1 ENCFF865YLR 1973394576 Michael Snyder, Stanford 7b3b4e708c148e4325def144e9900597 https://www.encodeproject.org/files/ENCFF845UZE/@@download/ENCFF845UZE.fastq.gz Illumina HiSeq 2000 /files/ENCFF096CKY/ archived inconsistent platforms, missing genetic modification characterization, mild to moderate bottlenecking ENCFF446UOL bam alignments ENCSR178DEG ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NR2C1-human ENCAB728YTO DNA False 2017-01-31 ENCODE 1 ENCFF060XCR, ENCFF097GJA, ENCFF807MUK 1683551493 ENCODE Processing Pipeline 78652857ef0047824173c19033001169 https://www.encodeproject.org/files/ENCFF446UOL/@@download/ENCFF446UOL.bam hg19 archived inconsistent platforms, missing genetic modification characterization, mild to moderate bottlenecking ENCFF845MTL bam alignments ENCSR178DEG ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NR2C1-human ENCAB728YTO DNA False 2017-01-31 ENCODE 2 ENCFF807MUK, ENCFF845UZE, ENCFF865YLR 3429745486 ENCODE Processing Pipeline f16123501b41d0ace4e010652b4f0d14 https://www.encodeproject.org/files/ENCFF845MTL/@@download/ENCFF845MTL.bam hg19 archived inconsistent platforms, missing genetic modification characterization, mild to moderate bottlenecking ENCFF960ZID fastq reads ENCSR178DEG ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NR2C1-human ENCAB728YTO DNA False 2017-01-31 ENCODE 1 1 100 paired-ended 1 ENCFF096VXL 2327810208 Michael Snyder, Stanford b59b83dd77cb12d5c9506909db721bcc SRA:SRR6212908 https://www.encodeproject.org/files/ENCFF960ZID/@@download/ENCFF960ZID.fastq.gz Illumina HiSeq 4000 /files/ENCFF725WQM/ released inconsistent platforms, missing genetic modification characterization, mild to moderate bottlenecking ENCFF096VXL fastq reads ENCSR178DEG ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NR2C1-human ENCAB728YTO DNA False 2017-01-31 ENCODE 1 1 100 paired-ended 2 ENCFF960ZID 2398620655 Michael Snyder, Stanford fb4a71ea7b7242813122a2330c940f64 SRA:SRR6212908 https://www.encodeproject.org/files/ENCFF096VXL/@@download/ENCFF096VXL.fastq.gz Illumina HiSeq 4000 /files/ENCFF768JTI/ released inconsistent platforms, missing genetic modification characterization, mild to moderate bottlenecking ENCFF621NBR fastq reads ENCSR178DEG ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NR2C1-human ENCAB728YTO DNA False 2017-01-31 ENCODE 2 1 100 paired-ended 1 ENCFF230HNM 1702933378 Michael Snyder, Stanford e6a58c5dd40cf6ac64512b1bf89bcbff SRA:SRR6212907 https://www.encodeproject.org/files/ENCFF621NBR/@@download/ENCFF621NBR.fastq.gz Illumina HiSeq 4000 /files/ENCFF725WQM/ released inconsistent platforms, missing genetic modification characterization, mild to moderate bottlenecking ENCFF230HNM fastq reads ENCSR178DEG ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NR2C1-human ENCAB728YTO DNA False 2017-01-31 ENCODE 2 1 100 paired-ended 2 ENCFF621NBR 1753469814 Michael Snyder, Stanford 81bf40db506d5269661d6c9512446ee5 SRA:SRR6212907 https://www.encodeproject.org/files/ENCFF230HNM/@@download/ENCFF230HNM.fastq.gz Illumina HiSeq 4000 /files/ENCFF768JTI/ released inconsistent platforms, missing genetic modification characterization, mild to moderate bottlenecking ENCFF632XPI bam alignments ENCSR178DEG ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NR2C1-human ENCAB728YTO DNA False 2017-01-31 ENCODE 2 100 ENCFF230HNM, ENCFF621NBR, ENCFF807MUK 2601606091 ENCODE Processing Pipeline 96094db01007e34a1b1b62488159aa32 https://www.encodeproject.org/files/ENCFF632XPI/@@download/ENCFF632XPI.bam hg19 released inconsistent platforms, missing genetic modification characterization, mild to moderate bottlenecking ENCFF923STH bam unfiltered alignments ENCSR178DEG ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NR2C1-human ENCAB728YTO DNA False 2017-01-31 ENCODE 2 100 ENCFF230HNM, ENCFF621NBR, ENCFF807MUK 3268819207 ENCODE Processing Pipeline 64b5cdfae4a862972f337bbc83f4a967 https://www.encodeproject.org/files/ENCFF923STH/@@download/ENCFF923STH.bam hg19 released inconsistent platforms, missing genetic modification characterization, mild to moderate bottlenecking ENCFF402ILX bam unfiltered alignments ENCSR178DEG ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NR2C1-human ENCAB728YTO DNA False 2017-01-31 ENCODE 2 100 ENCFF230HNM, ENCFF621NBR, ENCFF643CGH 3272209908 ENCODE Processing Pipeline 375e94fae2b6c636f248f8e8501c810c https://www.encodeproject.org/files/ENCFF402ILX/@@download/ENCFF402ILX.bam GRCh38 released inconsistent platforms, missing genetic modification characterization, mild to moderate bottlenecking ENCFF285CII bam alignments ENCSR178DEG ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NR2C1-human ENCAB728YTO DNA False 2017-01-31 ENCODE 2 100 ENCFF230HNM, ENCFF621NBR, ENCFF643CGH 2602940586 ENCODE Processing Pipeline cf7270c0dfac26167418a5dc25f04689 https://www.encodeproject.org/files/ENCFF285CII/@@download/ENCFF285CII.bam GRCh38 released inconsistent platforms, missing genetic modification characterization, mild to moderate bottlenecking ENCFF748QNI bam alignments ENCSR178DEG ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NR2C1-human ENCAB728YTO DNA False 2017-01-31 ENCODE 1 100 ENCFF096VXL, ENCFF807MUK, ENCFF960ZID 3498764104 ENCODE Processing Pipeline e53309e28f49e5deb527411901d72907 https://www.encodeproject.org/files/ENCFF748QNI/@@download/ENCFF748QNI.bam hg19 released inconsistent platforms, missing genetic modification characterization, mild to moderate bottlenecking ENCFF288DQV bam unfiltered alignments ENCSR178DEG ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NR2C1-human ENCAB728YTO DNA False 2017-01-31 ENCODE 1 100 ENCFF096VXL, ENCFF807MUK, ENCFF960ZID 4410010376 ENCODE Processing Pipeline 439488f8545551783d59ff9a47b32d2f https://www.encodeproject.org/files/ENCFF288DQV/@@download/ENCFF288DQV.bam hg19 released inconsistent platforms, missing genetic modification characterization, mild to moderate bottlenecking ENCFF276NMY bam unfiltered alignments ENCSR178DEG ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NR2C1-human ENCAB728YTO DNA False 2017-01-31 ENCODE 1 100 ENCFF096VXL, ENCFF643CGH, ENCFF960ZID 4415232393 ENCODE Processing Pipeline 4866a8b9b64137f366bfea29481ebce1 https://www.encodeproject.org/files/ENCFF276NMY/@@download/ENCFF276NMY.bam GRCh38 released inconsistent platforms, missing genetic modification characterization, mild to moderate bottlenecking ENCFF096KBP bam alignments ENCSR178DEG ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NR2C1-human ENCAB728YTO DNA False 2017-01-31 ENCODE 1 100 ENCFF096VXL, ENCFF643CGH, ENCFF960ZID 3500924225 ENCODE Processing Pipeline 53bd3818c473c706469d38fc367b42e7 https://www.encodeproject.org/files/ENCFF096KBP/@@download/ENCFF096KBP.bam GRCh38 released inconsistent platforms, missing genetic modification characterization, mild to moderate bottlenecking ENCFF135PAY bigWig signal p-value ENCSR178DEG ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NR2C1-human ENCAB728YTO DNA False 2017-01-31 ENCODE 1 ENCFF591PYL, ENCFF748QNI 1131715631 ENCODE Processing Pipeline 8fee1cc7dcadd9b50c31beef96a66916 https://www.encodeproject.org/files/ENCFF135PAY/@@download/ENCFF135PAY.bigWig hg19 released inconsistent platforms, missing genetic modification characterization, mild to moderate bottlenecking ENCFF922ICQ bigWig signal p-value ENCSR178DEG ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NR2C1-human ENCAB728YTO DNA False 2017-01-31 ENCODE 2 ENCFF591PYL, ENCFF632XPI 1024374924 ENCODE Processing Pipeline 986f7017405102fdbad31f24438beb9f https://www.encodeproject.org/files/ENCFF922ICQ/@@download/ENCFF922ICQ.bigWig hg19 released inconsistent platforms, missing genetic modification characterization, mild to moderate bottlenecking ENCFF166FMY bigWig signal p-value ENCSR178DEG ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NR2C1-human ENCAB728YTO DNA False 2017-01-31 ENCODE 1, 2 ENCFF591PYL, ENCFF632XPI, ENCFF748QNI 1282527233 ENCODE Processing Pipeline 2dbc6ac20f45d851b35dacc0f93963ab https://www.encodeproject.org/files/ENCFF166FMY/@@download/ENCFF166FMY.bigWig hg19 released inconsistent platforms, missing genetic modification characterization, mild to moderate bottlenecking ENCFF878PED bigWig fold change over control ENCSR178DEG ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NR2C1-human ENCAB728YTO DNA False 2017-01-31 ENCODE 1 ENCFF591PYL, ENCFF748QNI 1212302902 ENCODE Processing Pipeline c1f3437bc6fdb7767520af1b390cbb92 https://www.encodeproject.org/files/ENCFF878PED/@@download/ENCFF878PED.bigWig hg19 released inconsistent platforms, missing genetic modification characterization, mild to moderate bottlenecking ENCFF243AWG bed narrowPeak peaks ENCSR178DEG ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NR2C1-human ENCAB728YTO DNA False 2017-01-31 ENCODE 1 ENCFF591PYL, ENCFF748QNI 6702271 ENCODE Processing Pipeline 48e73ba4a2edbd11ad5617c5bae35faa https://www.encodeproject.org/files/ENCFF243AWG/@@download/ENCFF243AWG.bed.gz hg19 released inconsistent platforms, missing genetic modification characterization, mild to moderate bottlenecking ENCFF258HYJ bed narrowPeak peaks ENCSR178DEG ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NR2C1-human ENCAB728YTO DNA False 2017-01-31 ENCODE 2 ENCFF591PYL, ENCFF632XPI 6525547 ENCODE Processing Pipeline 0707452f5158f3676955c29043b9816f https://www.encodeproject.org/files/ENCFF258HYJ/@@download/ENCFF258HYJ.bed.gz hg19 released inconsistent platforms, missing genetic modification characterization, mild to moderate bottlenecking ENCFF757JFR bigWig fold change over control ENCSR178DEG ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NR2C1-human ENCAB728YTO DNA False 2017-01-31 ENCODE 2 ENCFF591PYL, ENCFF632XPI 987225514 ENCODE Processing Pipeline 4fb19fe5544e2a0c7e4024d1cccde8f2 https://www.encodeproject.org/files/ENCFF757JFR/@@download/ENCFF757JFR.bigWig hg19 released inconsistent platforms, missing genetic modification characterization, mild to moderate bottlenecking ENCFF802GJA bed narrowPeak peaks ENCSR178DEG ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NR2C1-human ENCAB728YTO DNA False 2017-01-31 ENCODE 1, 2 ENCFF591PYL, ENCFF632XPI, ENCFF748QNI 7225697 ENCODE Processing Pipeline 28a2fed7e3d9e6ceb65d3ffa54860502 https://www.encodeproject.org/files/ENCFF802GJA/@@download/ENCFF802GJA.bed.gz hg19 released inconsistent platforms, missing genetic modification characterization, mild to moderate bottlenecking ENCFF883PPB bigWig fold change over control ENCSR178DEG ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NR2C1-human ENCAB728YTO DNA False 2017-01-31 ENCODE 1, 2 ENCFF591PYL, ENCFF632XPI, ENCFF748QNI 1673659294 ENCODE Processing Pipeline 4ed3199f6f9248386e2d7df0f7da7c59 https://www.encodeproject.org/files/ENCFF883PPB/@@download/ENCFF883PPB.bigWig hg19 released inconsistent platforms, missing genetic modification characterization, mild to moderate bottlenecking ENCFF025TNU bigBed narrowPeak peaks ENCSR178DEG ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NR2C1-human ENCAB728YTO DNA False 2017-01-31 ENCODE 1, 2 ENCFF802GJA 13311399 ENCODE Processing Pipeline f66f2a3cf382946c43123661332017d4 https://www.encodeproject.org/files/ENCFF025TNU/@@download/ENCFF025TNU.bigBed hg19 released inconsistent platforms, missing genetic modification characterization, mild to moderate bottlenecking ENCFF246CGV bigBed narrowPeak peaks ENCSR178DEG ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NR2C1-human ENCAB728YTO DNA False 2017-01-31 ENCODE 1 ENCFF243AWG 13357489 ENCODE Processing Pipeline 375ad71cc9afe6c606aa23c4537ab657 https://www.encodeproject.org/files/ENCFF246CGV/@@download/ENCFF246CGV.bigBed hg19 released inconsistent platforms, missing genetic modification characterization, mild to moderate bottlenecking ENCFF920NDY bigBed narrowPeak peaks ENCSR178DEG ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NR2C1-human ENCAB728YTO DNA False 2017-01-31 ENCODE 2 ENCFF258HYJ 13398413 ENCODE Processing Pipeline 4cc9e989eeaeafee97802255a26cdd83 https://www.encodeproject.org/files/ENCFF920NDY/@@download/ENCFF920NDY.bigBed hg19 released inconsistent platforms, missing genetic modification characterization, mild to moderate bottlenecking ENCFF633PGJ bed narrowPeak conservative idr thresholded peaks ENCSR178DEG ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NR2C1-human ENCAB728YTO DNA False 2017-01-31 ENCODE 1, 2 ENCFF001TDO, ENCFF243AWG, ENCFF258HYJ, ENCFF802GJA 422002 ENCODE Processing Pipeline 3975b1a4f948fb5c2ab2b04a7c98b18d https://www.encodeproject.org/files/ENCFF633PGJ/@@download/ENCFF633PGJ.bed.gz hg19 released inconsistent platforms, missing genetic modification characterization, mild to moderate bottlenecking ENCFF527SZQ bigBed narrowPeak optimal idr thresholded peaks ENCSR178DEG ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NR2C1-human ENCAB728YTO DNA False 2017-01-31 ENCODE 1, 2 ENCFF320THV 920973 ENCODE Processing Pipeline 2914e2c59b9308f25127b1eff3df370f https://www.encodeproject.org/files/ENCFF527SZQ/@@download/ENCFF527SZQ.bigBed hg19 released inconsistent platforms, missing genetic modification characterization, mild to moderate bottlenecking ENCFF508KDY bigBed narrowPeak conservative idr thresholded peaks ENCSR178DEG ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NR2C1-human ENCAB728YTO DNA False 2017-01-31 ENCODE 1, 2 ENCFF633PGJ 880162 ENCODE Processing Pipeline 24175dbee911d882d73c172af85bd6f5 https://www.encodeproject.org/files/ENCFF508KDY/@@download/ENCFF508KDY.bigBed hg19 released inconsistent platforms, missing genetic modification characterization, mild to moderate bottlenecking ENCFF320THV bed narrowPeak optimal idr thresholded peaks ENCSR178DEG ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NR2C1-human ENCAB728YTO DNA False 2017-01-31 ENCODE 1, 2 ENCFF001TDO, ENCFF243AWG, ENCFF258HYJ, ENCFF802GJA 447479 ENCODE Processing Pipeline b709cb1dcaca3ca588904fc3e400b3da https://www.encodeproject.org/files/ENCFF320THV/@@download/ENCFF320THV.bed.gz hg19 released inconsistent platforms, missing genetic modification characterization, mild to moderate bottlenecking ENCFF833WNC bigWig signal p-value ENCSR178DEG ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NR2C1-human ENCAB728YTO DNA False 2017-01-31 ENCODE 1 ENCFF096KBP, ENCFF652CFB 1080169656 ENCODE Processing Pipeline cce65e4c808a0377cd031676d147c360 https://www.encodeproject.org/files/ENCFF833WNC/@@download/ENCFF833WNC.bigWig GRCh38 released inconsistent platforms, missing genetic modification characterization, mild to moderate bottlenecking ENCFF337EVQ bigWig signal p-value ENCSR178DEG ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NR2C1-human ENCAB728YTO DNA False 2017-01-31 ENCODE 2 ENCFF285CII, ENCFF652CFB 1029991936 ENCODE Processing Pipeline 83f68e06f6c3c44c787036befcc90cca https://www.encodeproject.org/files/ENCFF337EVQ/@@download/ENCFF337EVQ.bigWig GRCh38 released inconsistent platforms, missing genetic modification characterization, mild to moderate bottlenecking ENCFF213LIJ bigWig signal p-value ENCSR178DEG ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NR2C1-human ENCAB728YTO DNA False 2017-01-31 ENCODE 1, 2 ENCFF096KBP, ENCFF285CII, ENCFF652CFB 1284467750 ENCODE Processing Pipeline 54e8199710dd1f90f15c60f6a688f3ad https://www.encodeproject.org/files/ENCFF213LIJ/@@download/ENCFF213LIJ.bigWig GRCh38 released inconsistent platforms, missing genetic modification characterization, mild to moderate bottlenecking ENCFF841YHR bigWig fold change over control ENCSR178DEG ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NR2C1-human ENCAB728YTO DNA False 2017-01-31 ENCODE 1, 2 ENCFF096KBP, ENCFF285CII, ENCFF652CFB 1679404220 ENCODE Processing Pipeline 129b0336f9149c63041fcaa4fcfb8fcd https://www.encodeproject.org/files/ENCFF841YHR/@@download/ENCFF841YHR.bigWig GRCh38 released inconsistent platforms, missing genetic modification characterization, mild to moderate bottlenecking ENCFF427MKM bigWig fold change over control ENCSR178DEG ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NR2C1-human ENCAB728YTO DNA False 2017-01-31 ENCODE 2 ENCFF285CII, ENCFF652CFB 987323732 ENCODE Processing Pipeline 396acd7a4c19142fbc492d3504897b7f https://www.encodeproject.org/files/ENCFF427MKM/@@download/ENCFF427MKM.bigWig GRCh38 released inconsistent platforms, missing genetic modification characterization, mild to moderate bottlenecking ENCFF066TTG bigBed narrowPeak peaks ENCSR178DEG ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NR2C1-human ENCAB728YTO DNA False 2017-01-31 ENCODE 1 ENCFF020YJO 13368094 ENCODE Processing Pipeline d9c4822850bd72a3894e038bbfbdd83b https://www.encodeproject.org/files/ENCFF066TTG/@@download/ENCFF066TTG.bigBed GRCh38 released inconsistent platforms, missing genetic modification characterization, mild to moderate bottlenecking ENCFF649HNW bigWig fold change over control ENCSR178DEG ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NR2C1-human ENCAB728YTO DNA False 2017-01-31 ENCODE 1 ENCFF096KBP, ENCFF652CFB 1215186641 ENCODE Processing Pipeline ef0a5933430c478442cd6cc1bb0b2b4d https://www.encodeproject.org/files/ENCFF649HNW/@@download/ENCFF649HNW.bigWig GRCh38 released inconsistent platforms, missing genetic modification characterization, mild to moderate bottlenecking ENCFF020YJO bed narrowPeak peaks ENCSR178DEG ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NR2C1-human ENCAB728YTO DNA False 2017-01-31 ENCODE 1 ENCFF096KBP, ENCFF652CFB 6701620 ENCODE Processing Pipeline 650241c9f9b2fb917d23fe39ea675840 https://www.encodeproject.org/files/ENCFF020YJO/@@download/ENCFF020YJO.bed.gz GRCh38 released inconsistent platforms, missing genetic modification characterization, mild to moderate bottlenecking ENCFF212MIH bed narrowPeak peaks ENCSR178DEG ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NR2C1-human ENCAB728YTO DNA False 2017-01-31 ENCODE 2 ENCFF285CII, ENCFF652CFB 6504626 ENCODE Processing Pipeline c429c7b562c8c57b30735c490b57d17a https://www.encodeproject.org/files/ENCFF212MIH/@@download/ENCFF212MIH.bed.gz GRCh38 released inconsistent platforms, missing genetic modification characterization, mild to moderate bottlenecking ENCFF141XEH bed narrowPeak conservative idr thresholded peaks ENCSR178DEG ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NR2C1-human ENCAB728YTO DNA False 2017-01-31 ENCODE 1, 2 ENCFF020YJO, ENCFF212MIH, ENCFF419RSJ, ENCFF863QLQ 413747 ENCODE Processing Pipeline 2a39ea9a417129c5520dc913d26f942f https://www.encodeproject.org/files/ENCFF141XEH/@@download/ENCFF141XEH.bed.gz GRCh38 released inconsistent platforms, missing genetic modification characterization, mild to moderate bottlenecking ENCFF342RAN bigBed narrowPeak conservative idr thresholded peaks ENCSR178DEG ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NR2C1-human ENCAB728YTO DNA False 2017-01-31 ENCODE 1, 2 ENCFF141XEH 873679 ENCODE Processing Pipeline c46d169b97fda4872cca0bdd1e8a717d https://www.encodeproject.org/files/ENCFF342RAN/@@download/ENCFF342RAN.bigBed GRCh38 released inconsistent platforms, missing genetic modification characterization, mild to moderate bottlenecking ENCFF863QLQ bed narrowPeak peaks ENCSR178DEG ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NR2C1-human ENCAB728YTO DNA False 2017-01-31 ENCODE 1, 2 ENCFF096KBP, ENCFF285CII, ENCFF652CFB 7203273 ENCODE Processing Pipeline 87d454d48dee1b031ed4db893a839b83 https://www.encodeproject.org/files/ENCFF863QLQ/@@download/ENCFF863QLQ.bed.gz GRCh38 released inconsistent platforms, missing genetic modification characterization, mild to moderate bottlenecking ENCFF450TUL bigBed narrowPeak peaks ENCSR178DEG ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NR2C1-human ENCAB728YTO DNA False 2017-01-31 ENCODE 1, 2 ENCFF863QLQ 13299897 ENCODE Processing Pipeline f3f9cbf1800d95af9db930f52533688d https://www.encodeproject.org/files/ENCFF450TUL/@@download/ENCFF450TUL.bigBed GRCh38 released inconsistent platforms, missing genetic modification characterization, mild to moderate bottlenecking ENCFF045SYW bigBed narrowPeak optimal idr thresholded peaks ENCSR178DEG ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NR2C1-human ENCAB728YTO DNA False 2017-01-31 ENCODE 1, 2 ENCFF431GJK 924448 ENCODE Processing Pipeline cedd5ec1b6e9f3c76e2b1342ab0d8957 https://www.encodeproject.org/files/ENCFF045SYW/@@download/ENCFF045SYW.bigBed GRCh38 released inconsistent platforms, missing genetic modification characterization, mild to moderate bottlenecking ENCFF716YKD bigBed narrowPeak peaks ENCSR178DEG ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NR2C1-human ENCAB728YTO DNA False 2017-01-31 ENCODE 2 ENCFF212MIH 13391683 ENCODE Processing Pipeline 6eaa4fc569a74a800e7e554437d47402 https://www.encodeproject.org/files/ENCFF716YKD/@@download/ENCFF716YKD.bigBed GRCh38 released inconsistent platforms, missing genetic modification characterization, mild to moderate bottlenecking ENCFF431GJK bed narrowPeak optimal idr thresholded peaks ENCSR178DEG ChIP-seq EFO:0002067 K562 cell line Homo sapiens eGFP-NR2C1-human ENCAB728YTO DNA False 2017-01-31 ENCODE 1, 2 ENCFF020YJO, ENCFF212MIH, ENCFF419RSJ, ENCFF863QLQ 446273 ENCODE Processing Pipeline 07faf723ed3075a3081c4c8d9b173ccf https://www.encodeproject.org/files/ENCFF431GJK/@@download/ENCFF431GJK.bed.gz GRCh38 released inconsistent platforms, missing genetic modification characterization, mild to moderate bottlenecking ENCFF970NLP fastq reads ENCSR051DXE ChIP-seq EFO:0002067 K562 cell line Homo sapiens FUS-human ENCAB598VSJ DNA SDS formaldehyde False 2017-02-27 ENCODE 1 1 40 single-ended 431641060 Xiang-Dong Fu, UCSD 0205b88874a1a14ca59a4415e3a9aa64 SRA:SRR6213029 https://www.encodeproject.org/files/ENCFF970NLP/@@download/ENCFF970NLP.fastq.gz Illumina HiSeq 2500 /files/ENCFF510UAH/ released low read depth, low read length ENCFF761RTS fastq reads ENCSR051DXE ChIP-seq EFO:0002067 K562 cell line Homo sapiens FUS-human ENCAB598VSJ DNA SDS formaldehyde False 2017-02-27 ENCODE 2 1 40 single-ended 446053581 Xiang-Dong Fu, UCSD 68e21d9c6814f678148be8351aafdbff SRA:SRR6213030 https://www.encodeproject.org/files/ENCFF761RTS/@@download/ENCFF761RTS.fastq.gz Illumina HiSeq 2500 /files/ENCFF092DDZ/ released low read depth, low read length ENCFF586AEL bam unfiltered alignments ENCSR051DXE ChIP-seq EFO:0002067 K562 cell line Homo sapiens FUS-human ENCAB598VSJ DNA SDS formaldehyde False 2017-02-27 ENCODE 1 40 ENCFF807MUK, ENCFF970NLP 604758083 ENCODE Processing Pipeline 0e850815ce6711ca9377d1c882bc728c https://www.encodeproject.org/files/ENCFF586AEL/@@download/ENCFF586AEL.bam hg19 released low read depth, low read length ENCFF759PVZ bam alignments ENCSR051DXE ChIP-seq EFO:0002067 K562 cell line Homo sapiens FUS-human ENCAB598VSJ DNA SDS formaldehyde False 2017-02-27 ENCODE 2 40 ENCFF761RTS, ENCFF807MUK 449679272 ENCODE Processing Pipeline 7700bb25cfdd2c38d40baabefa534a1b https://www.encodeproject.org/files/ENCFF759PVZ/@@download/ENCFF759PVZ.bam hg19 released low read depth, low read length ENCFF188YBS bam unfiltered alignments ENCSR051DXE ChIP-seq EFO:0002067 K562 cell line Homo sapiens FUS-human ENCAB598VSJ DNA SDS formaldehyde False 2017-02-27 ENCODE 1 40 ENCFF643CGH, ENCFF970NLP 607251838 ENCODE Processing Pipeline ac43b07dc0914f69ca7f19c2d400848b https://www.encodeproject.org/files/ENCFF188YBS/@@download/ENCFF188YBS.bam GRCh38 released low read depth, low read length ENCFF958RAN bam alignments ENCSR051DXE ChIP-seq EFO:0002067 K562 cell line Homo sapiens FUS-human ENCAB598VSJ DNA SDS formaldehyde False 2017-02-27 ENCODE 1 40 ENCFF807MUK, ENCFF970NLP 438076916 ENCODE Processing Pipeline 7a6ba8e126f82d10fda5dcd72bf8cb69 https://www.encodeproject.org/files/ENCFF958RAN/@@download/ENCFF958RAN.bam hg19 released low read depth, low read length ENCFF059LDJ bam unfiltered alignments ENCSR051DXE ChIP-seq EFO:0002067 K562 cell line Homo sapiens FUS-human ENCAB598VSJ DNA SDS formaldehyde False 2017-02-27 ENCODE 2 40 ENCFF761RTS, ENCFF807MUK 623848568 ENCODE Processing Pipeline c77fafecc9216d97375bf9d5cb617234 https://www.encodeproject.org/files/ENCFF059LDJ/@@download/ENCFF059LDJ.bam hg19 released low read depth, low read length ENCFF361MTW bam alignments ENCSR051DXE ChIP-seq EFO:0002067 K562 cell line Homo sapiens FUS-human ENCAB598VSJ DNA SDS formaldehyde False 2017-02-27 ENCODE 1 40 ENCFF643CGH, ENCFF970NLP 437556134 ENCODE Processing Pipeline f89031a04ca2f0cb80656f3c73ca43f2 https://www.encodeproject.org/files/ENCFF361MTW/@@download/ENCFF361MTW.bam GRCh38 released low read depth, low read length ENCFF503JQK bam alignments ENCSR051DXE ChIP-seq EFO:0002067 K562 cell line Homo sapiens FUS-human ENCAB598VSJ DNA SDS formaldehyde False 2017-02-27 ENCODE 2 40 ENCFF643CGH, ENCFF761RTS 449126266 ENCODE Processing Pipeline 805ab6ca3a445c33c9bd5a25a75570b9 https://www.encodeproject.org/files/ENCFF503JQK/@@download/ENCFF503JQK.bam GRCh38 released low read depth, low read length ENCFF826ECD bam unfiltered alignments ENCSR051DXE ChIP-seq EFO:0002067 K562 cell line Homo sapiens FUS-human ENCAB598VSJ DNA SDS formaldehyde False 2017-02-27 ENCODE 2 40 ENCFF643CGH, ENCFF761RTS 626460842 ENCODE Processing Pipeline f3628cd3303b1c4e4fd4ff55a7497b84 https://www.encodeproject.org/files/ENCFF826ECD/@@download/ENCFF826ECD.bam GRCh38 released low read depth, low read length ENCFF281BEN bigWig signal p-value ENCSR051DXE ChIP-seq EFO:0002067 K562 cell line Homo sapiens FUS-human ENCAB598VSJ DNA SDS formaldehyde False 2017-02-27 ENCODE 1 ENCFF361MTW, ENCFF721LZU 452491294 ENCODE Processing Pipeline 2fd2562c4368372df4ca3a51780bb80e https://www.encodeproject.org/files/ENCFF281BEN/@@download/ENCFF281BEN.bigWig GRCh38 released low read depth, low read length ENCFF598JTE bigWig signal p-value ENCSR051DXE ChIP-seq EFO:0002067 K562 cell line Homo sapiens FUS-human ENCAB598VSJ DNA SDS formaldehyde False 2017-02-27 ENCODE 1 ENCFF508DBG, ENCFF958RAN 469838361 ENCODE Processing Pipeline 9c1b5e005fb827b3422217efc881e3c4 https://www.encodeproject.org/files/ENCFF598JTE/@@download/ENCFF598JTE.bigWig hg19 released low read depth, low read length ENCFF761OEF bigWig signal p-value ENCSR051DXE ChIP-seq EFO:0002067 K562 cell line Homo sapiens FUS-human ENCAB598VSJ DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF508DBG, ENCFF572OMD, ENCFF759PVZ, ENCFF958RAN 851748764 ENCODE Processing Pipeline 1ae3a9c850002c41270c1ac57f281a5a https://www.encodeproject.org/files/ENCFF761OEF/@@download/ENCFF761OEF.bigWig hg19 released low read depth, low read length ENCFF129RMB bigWig signal p-value ENCSR051DXE ChIP-seq EFO:0002067 K562 cell line Homo sapiens FUS-human ENCAB598VSJ DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF100PTE, ENCFF361MTW, ENCFF503JQK, ENCFF721LZU 864766882 ENCODE Processing Pipeline d25fe78aed48f41d4a4429ee0802ccb6 https://www.encodeproject.org/files/ENCFF129RMB/@@download/ENCFF129RMB.bigWig GRCh38 released low read depth, low read length ENCFF775PYP bigWig fold change over control ENCSR051DXE ChIP-seq EFO:0002067 K562 cell line Homo sapiens FUS-human ENCAB598VSJ DNA SDS formaldehyde False 2017-02-27 ENCODE 2 ENCFF572OMD, ENCFF759PVZ 282568911 ENCODE Processing Pipeline 59a6d1f4b0db5df5b464ac2b27844233 https://www.encodeproject.org/files/ENCFF775PYP/@@download/ENCFF775PYP.bigWig hg19 released low read depth, low read length ENCFF389HBW bigWig signal p-value ENCSR051DXE ChIP-seq EFO:0002067 K562 cell line Homo sapiens FUS-human ENCAB598VSJ DNA SDS formaldehyde False 2017-02-27 ENCODE 2 ENCFF572OMD, ENCFF759PVZ 464865344 ENCODE Processing Pipeline 8540c1955f23a3efce6c0f136cbf3af4 https://www.encodeproject.org/files/ENCFF389HBW/@@download/ENCFF389HBW.bigWig hg19 released low read depth, low read length ENCFF128WPZ bigWig signal p-value ENCSR051DXE ChIP-seq EFO:0002067 K562 cell line Homo sapiens FUS-human ENCAB598VSJ DNA SDS formaldehyde False 2017-02-27 ENCODE 2 ENCFF100PTE, ENCFF503JQK 503933921 ENCODE Processing Pipeline 44b433892f2a9797c9971ee9725c8e0a https://www.encodeproject.org/files/ENCFF128WPZ/@@download/ENCFF128WPZ.bigWig GRCh38 released low read depth, low read length ENCFF103YUM bigWig fold change over control ENCSR051DXE ChIP-seq EFO:0002067 K562 cell line Homo sapiens FUS-human ENCAB598VSJ DNA SDS formaldehyde False 2017-02-27 ENCODE 1 ENCFF508DBG, ENCFF958RAN 301161309 ENCODE Processing Pipeline 67433cbff7ae83346d7475f15ae8cb3d https://www.encodeproject.org/files/ENCFF103YUM/@@download/ENCFF103YUM.bigWig hg19 released low read depth, low read length ENCFF635OPE bigWig fold change over control ENCSR051DXE ChIP-seq EFO:0002067 K562 cell line Homo sapiens FUS-human ENCAB598VSJ DNA SDS formaldehyde False 2017-02-27 ENCODE 1 ENCFF361MTW, ENCFF721LZU 306841252 ENCODE Processing Pipeline 76c66cb57c152bca82e789d23bf2b9dd https://www.encodeproject.org/files/ENCFF635OPE/@@download/ENCFF635OPE.bigWig GRCh38 released low read depth, low read length ENCFF193ODS bigWig fold change over control ENCSR051DXE ChIP-seq EFO:0002067 K562 cell line Homo sapiens FUS-human ENCAB598VSJ DNA SDS formaldehyde False 2017-02-27 ENCODE 2 ENCFF100PTE, ENCFF503JQK 285813242 ENCODE Processing Pipeline cba2910d37678979829502047aefb085 https://www.encodeproject.org/files/ENCFF193ODS/@@download/ENCFF193ODS.bigWig GRCh38 released low read depth, low read length ENCFF380ABG bigWig fold change over control ENCSR051DXE ChIP-seq EFO:0002067 K562 cell line Homo sapiens FUS-human ENCAB598VSJ DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF508DBG, ENCFF572OMD, ENCFF759PVZ, ENCFF958RAN 700598601 ENCODE Processing Pipeline ff3e413c9eb53a7cf98c5d61a36458da https://www.encodeproject.org/files/ENCFF380ABG/@@download/ENCFF380ABG.bigWig hg19 released low read depth, low read length ENCFF530LEM bed narrowPeak peaks ENCSR051DXE ChIP-seq EFO:0002067 K562 cell line Homo sapiens FUS-human ENCAB598VSJ DNA SDS formaldehyde False 2017-02-27 ENCODE 1 ENCFF508DBG, ENCFF958RAN 5274330 ENCODE Processing Pipeline 2976755b3d2aaca90dab9b9f90bc820b https://www.encodeproject.org/files/ENCFF530LEM/@@download/ENCFF530LEM.bed.gz hg19 released low read depth, low read length ENCFF644TNS bed narrowPeak peaks ENCSR051DXE ChIP-seq EFO:0002067 K562 cell line Homo sapiens FUS-human ENCAB598VSJ DNA SDS formaldehyde False 2017-02-27 ENCODE 2 ENCFF572OMD, ENCFF759PVZ 5160791 ENCODE Processing Pipeline 6bfa5f6bf5822a3bea2eb7fa002d3b3e https://www.encodeproject.org/files/ENCFF644TNS/@@download/ENCFF644TNS.bed.gz hg19 released low read depth, low read length ENCFF241PLE bigBed narrowPeak peaks ENCSR051DXE ChIP-seq EFO:0002067 K562 cell line Homo sapiens FUS-human ENCAB598VSJ DNA SDS formaldehyde False 2017-02-27 ENCODE 2 ENCFF274GZP 13110380 ENCODE Processing Pipeline 50de8831e7132da9954604dfc34a357c https://www.encodeproject.org/files/ENCFF241PLE/@@download/ENCFF241PLE.bigBed GRCh38 released low read depth, low read length ENCFF782EKH bigBed narrowPeak peaks ENCSR051DXE ChIP-seq EFO:0002067 K562 cell line Homo sapiens FUS-human ENCAB598VSJ DNA SDS formaldehyde False 2017-02-27 ENCODE 2 ENCFF644TNS 13144996 ENCODE Processing Pipeline c7f60bc53475313f45219a0c663e3a71 https://www.encodeproject.org/files/ENCFF782EKH/@@download/ENCFF782EKH.bigBed hg19 released low read depth, low read length ENCFF274GZP bed narrowPeak peaks ENCSR051DXE ChIP-seq EFO:0002067 K562 cell line Homo sapiens FUS-human ENCAB598VSJ DNA SDS formaldehyde False 2017-02-27 ENCODE 2 ENCFF100PTE, ENCFF503JQK 4987638 ENCODE Processing Pipeline 39afa1485a491dd0b07f3a2c9f954816 https://www.encodeproject.org/files/ENCFF274GZP/@@download/ENCFF274GZP.bed.gz GRCh38 released low read depth, low read length ENCFF442XTQ bed narrowPeak peaks ENCSR051DXE ChIP-seq EFO:0002067 K562 cell line Homo sapiens FUS-human ENCAB598VSJ DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF100PTE, ENCFF361MTW, ENCFF503JQK, ENCFF721LZU 6261999 ENCODE Processing Pipeline 9510e6af8c5950d96724e5f85d61480e https://www.encodeproject.org/files/ENCFF442XTQ/@@download/ENCFF442XTQ.bed.gz GRCh38 released low read depth, low read length ENCFF589BOI bigWig fold change over control ENCSR051DXE ChIP-seq EFO:0002067 K562 cell line Homo sapiens FUS-human ENCAB598VSJ DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF100PTE, ENCFF361MTW, ENCFF503JQK, ENCFF721LZU 704285539 ENCODE Processing Pipeline 1d1e5befed18fa1c2b325a69fe44325c https://www.encodeproject.org/files/ENCFF589BOI/@@download/ENCFF589BOI.bigWig GRCh38 released low read depth, low read length ENCFF262DPM bed narrowPeak peaks ENCSR051DXE ChIP-seq EFO:0002067 K562 cell line Homo sapiens FUS-human ENCAB598VSJ DNA SDS formaldehyde False 2017-02-27 ENCODE 1 ENCFF361MTW, ENCFF721LZU 5107532 ENCODE Processing Pipeline ff9d0e272ed8771ec4ef1bb737156416 https://www.encodeproject.org/files/ENCFF262DPM/@@download/ENCFF262DPM.bed.gz GRCh38 released low read depth, low read length ENCFF495FUA bigBed narrowPeak peaks ENCSR051DXE ChIP-seq EFO:0002067 K562 cell line Homo sapiens FUS-human ENCAB598VSJ DNA SDS formaldehyde False 2017-02-27 ENCODE 1 ENCFF262DPM 13179180 ENCODE Processing Pipeline 057950a576c23f4b5fc9ec2961ba6cd7 https://www.encodeproject.org/files/ENCFF495FUA/@@download/ENCFF495FUA.bigBed GRCh38 released low read depth, low read length ENCFF399MLN bigBed narrowPeak conservative idr thresholded peaks ENCSR051DXE ChIP-seq EFO:0002067 K562 cell line Homo sapiens FUS-human ENCAB598VSJ DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF500ARI 147882 ENCODE Processing Pipeline 343744cef4dc1ec6686bf973ca0e28c8 https://www.encodeproject.org/files/ENCFF399MLN/@@download/ENCFF399MLN.bigBed GRCh38 released low read depth, low read length ENCFF192IFJ bed narrowPeak peaks ENCSR051DXE ChIP-seq EFO:0002067 K562 cell line Homo sapiens FUS-human ENCAB598VSJ DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF508DBG, ENCFF572OMD, ENCFF759PVZ, ENCFF958RAN 6427776 ENCODE Processing Pipeline 9344208dd7f4d437d626e0d79ddafdbf https://www.encodeproject.org/files/ENCFF192IFJ/@@download/ENCFF192IFJ.bed.gz hg19 released low read depth, low read length ENCFF338REW bigBed narrowPeak peaks ENCSR051DXE ChIP-seq EFO:0002067 K562 cell line Homo sapiens FUS-human ENCAB598VSJ DNA SDS formaldehyde False 2017-02-27 ENCODE 1 ENCFF530LEM 13183395 ENCODE Processing Pipeline cd2909a2938f2f8b4244c2f04164ccde https://www.encodeproject.org/files/ENCFF338REW/@@download/ENCFF338REW.bigBed hg19 released low read depth, low read length ENCFF470RGJ bigBed narrowPeak peaks ENCSR051DXE ChIP-seq EFO:0002067 K562 cell line Homo sapiens FUS-human ENCAB598VSJ DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF442XTQ 13395850 ENCODE Processing Pipeline 3f59f629690b64f398c3d81c15bff639 https://www.encodeproject.org/files/ENCFF470RGJ/@@download/ENCFF470RGJ.bigBed GRCh38 released low read depth, low read length ENCFF500ARI bed narrowPeak conservative idr thresholded peaks ENCSR051DXE ChIP-seq EFO:0002067 K562 cell line Homo sapiens FUS-human ENCAB598VSJ DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF262DPM, ENCFF274GZP, ENCFF419RSJ, ENCFF442XTQ 46852 ENCODE Processing Pipeline 8d6385845c0399752fdb68dcb8b10824 https://www.encodeproject.org/files/ENCFF500ARI/@@download/ENCFF500ARI.bed.gz GRCh38 released low read depth, low read length ENCFF135WSQ bigBed narrowPeak peaks ENCSR051DXE ChIP-seq EFO:0002067 K562 cell line Homo sapiens FUS-human ENCAB598VSJ DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF192IFJ 13333681 ENCODE Processing Pipeline 2aedb75c798741996b856df21309bc86 https://www.encodeproject.org/files/ENCFF135WSQ/@@download/ENCFF135WSQ.bigBed hg19 released low read depth, low read length ENCFF137NMV bed narrowPeak conservative idr thresholded peaks ENCSR051DXE ChIP-seq EFO:0002067 K562 cell line Homo sapiens FUS-human ENCAB598VSJ DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF001TDO, ENCFF192IFJ, ENCFF530LEM, ENCFF644TNS 43766 ENCODE Processing Pipeline 1c6065554450cecca473c16a3b270d08 https://www.encodeproject.org/files/ENCFF137NMV/@@download/ENCFF137NMV.bed.gz hg19 released low read depth, low read length ENCFF516VRQ bigBed narrowPeak conservative idr thresholded peaks ENCSR051DXE ChIP-seq EFO:0002067 K562 cell line Homo sapiens FUS-human ENCAB598VSJ DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF137NMV 140794 ENCODE Processing Pipeline 206da6bf4f842f3830f81db8e2cff196 https://www.encodeproject.org/files/ENCFF516VRQ/@@download/ENCFF516VRQ.bigBed hg19 released low read depth, low read length ENCFF688ARM bed narrowPeak optimal idr thresholded peaks ENCSR051DXE ChIP-seq EFO:0002067 K562 cell line Homo sapiens FUS-human ENCAB598VSJ DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF262DPM, ENCFF274GZP, ENCFF419RSJ, ENCFF442XTQ 51122 ENCODE Processing Pipeline 38a4b430c3a24e7315b8cd6dca8134ac https://www.encodeproject.org/files/ENCFF688ARM/@@download/ENCFF688ARM.bed.gz GRCh38 released low read depth, low read length ENCFF142CPK bed narrowPeak optimal idr thresholded peaks ENCSR051DXE ChIP-seq EFO:0002067 K562 cell line Homo sapiens FUS-human ENCAB598VSJ DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF001TDO, ENCFF192IFJ, ENCFF530LEM, ENCFF644TNS 51659 ENCODE Processing Pipeline 9d78627b43ad26ec1f1ea21705cd7c92 https://www.encodeproject.org/files/ENCFF142CPK/@@download/ENCFF142CPK.bed.gz hg19 released low read depth, low read length ENCFF090LHF bigBed narrowPeak optimal idr thresholded peaks ENCSR051DXE ChIP-seq EFO:0002067 K562 cell line Homo sapiens FUS-human ENCAB598VSJ DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF688ARM 155596 ENCODE Processing Pipeline 95442af6bf640a54aaf08c8281ec2144 https://www.encodeproject.org/files/ENCFF090LHF/@@download/ENCFF090LHF.bigBed GRCh38 released low read depth, low read length ENCFF049NDY bigBed narrowPeak optimal idr thresholded peaks ENCSR051DXE ChIP-seq EFO:0002067 K562 cell line Homo sapiens FUS-human ENCAB598VSJ DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF142CPK 155001 ENCODE Processing Pipeline f698ecfacf95e88ce816fcedb37041e7 https://www.encodeproject.org/files/ENCFF049NDY/@@download/ENCFF049NDY.bigBed hg19 released low read depth, low read length ENCFF438OBK fastq reads ENCSR603REQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens PCBP2-human ENCAB000BFY DNA SDS formaldehyde False 2018-01-16 ENCODE 2 1 40 single-ended 628115455 Xiang-Dong Fu, UCSD 7b46c8914880f831fad3a273a02ea194 https://www.encodeproject.org/files/ENCFF438OBK/@@download/ENCFF438OBK.fastq.gz Illumina HiSeq 2000 /files/ENCFF338QTL/ released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF118JPH fastq reads ENCSR603REQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens PCBP2-human ENCAB000BFY DNA SDS formaldehyde False 2018-01-16 ENCODE 1 1 40 single-ended 450364323 Xiang-Dong Fu, UCSD 16b9d3f35e791ec901a05799ee60cac3 https://www.encodeproject.org/files/ENCFF118JPH/@@download/ENCFF118JPH.fastq.gz Illumina HiSeq 2000 /files/ENCFF317LUD/ released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF926CUN fastq reads ENCSR603REQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens PCBP2-human ENCAB000BFY DNA SDS formaldehyde False 2018-01-16 ENCODE 1 1 40 single-ended 1357108352 Xiang-Dong Fu, UCSD 5ca7c473090dbcdbd71e34b8edfa7160 https://www.encodeproject.org/files/ENCFF926CUN/@@download/ENCFF926CUN.fastq.gz Illumina HiSeq 2500 /files/ENCFF317LUD/ released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF946HSG bam unfiltered alignments ENCSR603REQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens PCBP2-human ENCAB000BFY DNA SDS formaldehyde False 2018-01-16 ENCODE 2 40 ENCFF438OBK, ENCFF807MUK 815956461 ENCODE Processing Pipeline 93684b90b960c488c51cd1d3e5f31712 https://www.encodeproject.org/files/ENCFF946HSG/@@download/ENCFF946HSG.bam hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF098EOS bam alignments ENCSR603REQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens PCBP2-human ENCAB000BFY DNA SDS formaldehyde False 2018-01-16 ENCODE 2 40 ENCFF438OBK, ENCFF807MUK 438308238 ENCODE Processing Pipeline 5fea5c8f5ed8ec485dfd2b6f41cf1d2c https://www.encodeproject.org/files/ENCFF098EOS/@@download/ENCFF098EOS.bam hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF458JNU bam alignments ENCSR603REQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens PCBP2-human ENCAB000BFY DNA SDS formaldehyde False 2018-01-16 ENCODE 2 40 ENCFF438OBK, ENCFF643CGH 437853420 ENCODE Processing Pipeline 01ebd87ad6a1b3372ffb58e06d9666fd https://www.encodeproject.org/files/ENCFF458JNU/@@download/ENCFF458JNU.bam GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF650AZW bam unfiltered alignments ENCSR603REQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens PCBP2-human ENCAB000BFY DNA SDS formaldehyde False 2018-01-16 ENCODE 2 40 ENCFF438OBK, ENCFF643CGH 819320421 ENCODE Processing Pipeline d9ec03a564126f9099932ebba6aafb8f https://www.encodeproject.org/files/ENCFF650AZW/@@download/ENCFF650AZW.bam GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF140KEX bam alignments ENCSR603REQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens PCBP2-human ENCAB000BFY DNA SDS formaldehyde False 2018-01-16 ENCODE 1 40 ENCFF118JPH, ENCFF807MUK, ENCFF926CUN 404890070 ENCODE Processing Pipeline 7de55b79a6a26cc50e9310512bad11fe https://www.encodeproject.org/files/ENCFF140KEX/@@download/ENCFF140KEX.bam hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF108SNZ bam alignments ENCSR603REQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens PCBP2-human ENCAB000BFY DNA SDS formaldehyde False 2018-01-16 ENCODE 1 40 ENCFF118JPH, ENCFF643CGH, ENCFF926CUN 404390606 ENCODE Processing Pipeline 98524a0e0cd2b0b093eea69b9beed857 https://www.encodeproject.org/files/ENCFF108SNZ/@@download/ENCFF108SNZ.bam GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF406TAS bam unfiltered alignments ENCSR603REQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens PCBP2-human ENCAB000BFY DNA SDS formaldehyde False 2018-01-16 ENCODE 1 40 ENCFF118JPH, ENCFF643CGH, ENCFF926CUN 1703297219 ENCODE Processing Pipeline 42a167de62194f494c418eef7c9ad316 https://www.encodeproject.org/files/ENCFF406TAS/@@download/ENCFF406TAS.bam GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF342UCZ bam unfiltered alignments ENCSR603REQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens PCBP2-human ENCAB000BFY DNA SDS formaldehyde False 2018-01-16 ENCODE 1 40 ENCFF118JPH, ENCFF807MUK, ENCFF926CUN 1692865507 ENCODE Processing Pipeline 61caef1e22fc666ded2195e42d1b5b07 https://www.encodeproject.org/files/ENCFF342UCZ/@@download/ENCFF342UCZ.bam hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF308RAP bigWig fold change over control ENCSR603REQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens PCBP2-human ENCAB000BFY DNA SDS formaldehyde False 2018-01-16 ENCODE 1 ENCFF108SNZ, ENCFF836GUS 327564973 ENCODE Processing Pipeline 01c2064a5c115fbb7b4c91c84c28f8a7 https://www.encodeproject.org/files/ENCFF308RAP/@@download/ENCFF308RAP.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF439KLP bed narrowPeak peaks ENCSR603REQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens PCBP2-human ENCAB000BFY DNA SDS formaldehyde False 2018-01-16 ENCODE 1, 2 ENCFF108SNZ, ENCFF345ODV, ENCFF458JNU, ENCFF836GUS 6685429 ENCODE Processing Pipeline 12efe09109143020a9b3bb1089a069b7 https://www.encodeproject.org/files/ENCFF439KLP/@@download/ENCFF439KLP.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF856DXD bigBed narrowPeak peaks ENCSR603REQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens PCBP2-human ENCAB000BFY DNA SDS formaldehyde False 2018-01-16 ENCODE 1 ENCFF201PAF 13266015 ENCODE Processing Pipeline 221b9bb8574c97202e0319b127f76706 https://www.encodeproject.org/files/ENCFF856DXD/@@download/ENCFF856DXD.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF060ZSF bigWig signal p-value ENCSR603REQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens PCBP2-human ENCAB000BFY DNA SDS formaldehyde False 2018-01-16 ENCODE 1, 2 ENCFF108SNZ, ENCFF345ODV, ENCFF458JNU, ENCFF836GUS 880401229 ENCODE Processing Pipeline a3a0daaec87d5e501fae1c74f4dd05c2 https://www.encodeproject.org/files/ENCFF060ZSF/@@download/ENCFF060ZSF.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF941XZW bed narrowPeak optimal idr thresholded peaks ENCSR603REQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens PCBP2-human ENCAB000BFY DNA SDS formaldehyde False 2018-01-16 ENCODE 1, 2 ENCFF201PAF, ENCFF250WGH, ENCFF419RSJ, ENCFF439KLP 50682 ENCODE Processing Pipeline 8bf0dd9d3ce9826e344eaad858457ff8 https://www.encodeproject.org/files/ENCFF941XZW/@@download/ENCFF941XZW.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF201PAF bed narrowPeak peaks ENCSR603REQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens PCBP2-human ENCAB000BFY DNA SDS formaldehyde False 2018-01-16 ENCODE 1 ENCFF108SNZ, ENCFF836GUS 5356728 ENCODE Processing Pipeline c6e003439662267ffa664d4f7a5d8f0a https://www.encodeproject.org/files/ENCFF201PAF/@@download/ENCFF201PAF.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF369IJD bigBed narrowPeak peaks ENCSR603REQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens PCBP2-human ENCAB000BFY DNA SDS formaldehyde False 2018-01-16 ENCODE 1, 2 ENCFF439KLP 13465438 ENCODE Processing Pipeline 6beb875baec05e2af8bd14b7d934f3f5 https://www.encodeproject.org/files/ENCFF369IJD/@@download/ENCFF369IJD.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF246QEB bigWig signal p-value ENCSR603REQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens PCBP2-human ENCAB000BFY DNA SDS formaldehyde False 2018-01-16 ENCODE 1 ENCFF108SNZ, ENCFF836GUS 518966826 ENCODE Processing Pipeline 235f7b855caaefd8f515735289067570 https://www.encodeproject.org/files/ENCFF246QEB/@@download/ENCFF246QEB.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF567SMD bigWig fold change over control ENCSR603REQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens PCBP2-human ENCAB000BFY DNA SDS formaldehyde False 2018-01-16 ENCODE 2 ENCFF345ODV, ENCFF458JNU 340919082 ENCODE Processing Pipeline 1a26847c44d8834e29cfff64a2a3a42d https://www.encodeproject.org/files/ENCFF567SMD/@@download/ENCFF567SMD.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF599TBQ bigWig signal p-value ENCSR603REQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens PCBP2-human ENCAB000BFY DNA SDS formaldehyde False 2018-01-16 ENCODE 2 ENCFF345ODV, ENCFF458JNU 529507432 ENCODE Processing Pipeline a4409835fa57443e39013e9a6b537b78 https://www.encodeproject.org/files/ENCFF599TBQ/@@download/ENCFF599TBQ.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF114VUJ bigWig fold change over control ENCSR603REQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens PCBP2-human ENCAB000BFY DNA SDS formaldehyde False 2018-01-16 ENCODE 1, 2 ENCFF108SNZ, ENCFF345ODV, ENCFF458JNU, ENCFF836GUS 767111270 ENCODE Processing Pipeline 0b6990c99ce203f417334707c046fe94 https://www.encodeproject.org/files/ENCFF114VUJ/@@download/ENCFF114VUJ.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF862PIF bigBed narrowPeak peaks ENCSR603REQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens PCBP2-human ENCAB000BFY DNA SDS formaldehyde False 2018-01-16 ENCODE 2 ENCFF250WGH 13129144 ENCODE Processing Pipeline edd59c5eada1a59774d49a0e46dffadb https://www.encodeproject.org/files/ENCFF862PIF/@@download/ENCFF862PIF.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF520LYV bigBed narrowPeak conservative idr thresholded peaks ENCSR603REQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens PCBP2-human ENCAB000BFY DNA SDS formaldehyde False 2018-01-16 ENCODE 1, 2 ENCFF851MOQ 113727 ENCODE Processing Pipeline 69d7bcc1b50fea3491cdadb76a82589b https://www.encodeproject.org/files/ENCFF520LYV/@@download/ENCFF520LYV.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF250WGH bed narrowPeak peaks ENCSR603REQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens PCBP2-human ENCAB000BFY DNA SDS formaldehyde False 2018-01-16 ENCODE 2 ENCFF345ODV, ENCFF458JNU 4782656 ENCODE Processing Pipeline 02dae798b1136e43001198f7e6e9397b https://www.encodeproject.org/files/ENCFF250WGH/@@download/ENCFF250WGH.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF851MOQ bed narrowPeak conservative idr thresholded peaks ENCSR603REQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens PCBP2-human ENCAB000BFY DNA SDS formaldehyde False 2018-01-16 ENCODE 1, 2 ENCFF201PAF, ENCFF250WGH, ENCFF419RSJ, ENCFF439KLP 35120 ENCODE Processing Pipeline ee8768a805cf41bb14d2cfa5f4d013d2 https://www.encodeproject.org/files/ENCFF851MOQ/@@download/ENCFF851MOQ.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF739EZC bigBed narrowPeak optimal idr thresholded peaks ENCSR603REQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens PCBP2-human ENCAB000BFY DNA SDS formaldehyde False 2018-01-16 ENCODE 1, 2 ENCFF941XZW 136940 ENCODE Processing Pipeline a4d00607c02f42a070acf2384f4095df https://www.encodeproject.org/files/ENCFF739EZC/@@download/ENCFF739EZC.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF020EYY bigWig signal p-value ENCSR603REQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens PCBP2-human ENCAB000BFY DNA SDS formaldehyde False 2018-01-16 ENCODE 1 ENCFF140KEX, ENCFF502LLI 509750364 ENCODE Processing Pipeline 77ad44ed27f522f8901fa998500259ed https://www.encodeproject.org/files/ENCFF020EYY/@@download/ENCFF020EYY.bigWig hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF815ESE bigWig fold change over control ENCSR603REQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens PCBP2-human ENCAB000BFY DNA SDS formaldehyde False 2018-01-16 ENCODE 1 ENCFF140KEX, ENCFF502LLI 310176741 ENCODE Processing Pipeline ee37ad6b3956d7b9ff5e71f0078cc53f https://www.encodeproject.org/files/ENCFF815ESE/@@download/ENCFF815ESE.bigWig hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF316TNC bigWig signal p-value ENCSR603REQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens PCBP2-human ENCAB000BFY DNA SDS formaldehyde False 2018-01-16 ENCODE 2 ENCFF098EOS, ENCFF325CNX 500106937 ENCODE Processing Pipeline a083bd370486f82492888bfe339f4f11 https://www.encodeproject.org/files/ENCFF316TNC/@@download/ENCFF316TNC.bigWig hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF554MYS bed narrowPeak peaks ENCSR603REQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens PCBP2-human ENCAB000BFY DNA SDS formaldehyde False 2018-01-16 ENCODE 1 ENCFF140KEX, ENCFF502LLI 5425583 ENCODE Processing Pipeline d8257879064125b49782be75467d4b28 https://www.encodeproject.org/files/ENCFF554MYS/@@download/ENCFF554MYS.bed.gz hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF175XYE bigWig fold change over control ENCSR603REQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens PCBP2-human ENCAB000BFY DNA SDS formaldehyde False 2018-01-16 ENCODE 1, 2 ENCFF098EOS, ENCFF140KEX, ENCFF325CNX, ENCFF502LLI 767879197 ENCODE Processing Pipeline 507d11e16517dfcd8a126da9fc7486d5 https://www.encodeproject.org/files/ENCFF175XYE/@@download/ENCFF175XYE.bigWig hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF655DJE bigWig signal p-value ENCSR603REQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens PCBP2-human ENCAB000BFY DNA SDS formaldehyde False 2018-01-16 ENCODE 1, 2 ENCFF098EOS, ENCFF140KEX, ENCFF325CNX, ENCFF502LLI 839480445 ENCODE Processing Pipeline 91687b4a1445e66819072bf8464ae05d https://www.encodeproject.org/files/ENCFF655DJE/@@download/ENCFF655DJE.bigWig hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF190FHT bigWig fold change over control ENCSR603REQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens PCBP2-human ENCAB000BFY DNA SDS formaldehyde False 2018-01-16 ENCODE 2 ENCFF098EOS, ENCFF325CNX 344346212 ENCODE Processing Pipeline fd345ae3fa1b35aaf25280010dda4c37 https://www.encodeproject.org/files/ENCFF190FHT/@@download/ENCFF190FHT.bigWig hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF467EXO bed narrowPeak peaks ENCSR603REQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens PCBP2-human ENCAB000BFY DNA SDS formaldehyde False 2018-01-16 ENCODE 2 ENCFF098EOS, ENCFF325CNX 5193552 ENCODE Processing Pipeline 63bc6d85f90c43c4f9f17146535f7253 https://www.encodeproject.org/files/ENCFF467EXO/@@download/ENCFF467EXO.bed.gz hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF016WHL bed narrowPeak peaks ENCSR603REQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens PCBP2-human ENCAB000BFY DNA SDS formaldehyde False 2018-01-16 ENCODE 1, 2 ENCFF098EOS, ENCFF140KEX, ENCFF325CNX, ENCFF502LLI 6682019 ENCODE Processing Pipeline fdf2f4c3d6786341452d6875749166e8 https://www.encodeproject.org/files/ENCFF016WHL/@@download/ENCFF016WHL.bed.gz hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF193JXF bigBed narrowPeak peaks ENCSR603REQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens PCBP2-human ENCAB000BFY DNA SDS formaldehyde False 2018-01-16 ENCODE 1 ENCFF554MYS 13243879 ENCODE Processing Pipeline a7ea9f3bebe1d4b16a04a032d2f5449a https://www.encodeproject.org/files/ENCFF193JXF/@@download/ENCFF193JXF.bigBed hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF920GPR bigBed narrowPeak peaks ENCSR603REQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens PCBP2-human ENCAB000BFY DNA SDS formaldehyde False 2018-01-16 ENCODE 2 ENCFF467EXO 13237040 ENCODE Processing Pipeline 1a548b2d7e59a92397d6ed9d71ccf1a0 https://www.encodeproject.org/files/ENCFF920GPR/@@download/ENCFF920GPR.bigBed hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF612KRU bigBed narrowPeak optimal idr thresholded peaks ENCSR603REQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens PCBP2-human ENCAB000BFY DNA SDS formaldehyde False 2018-01-16 ENCODE 1, 2 ENCFF881XQF 131076 ENCODE Processing Pipeline dd116379ca7b252f8ca1dd3ad1a26f3e https://www.encodeproject.org/files/ENCFF612KRU/@@download/ENCFF612KRU.bigBed hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF573DIV bigBed narrowPeak peaks ENCSR603REQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens PCBP2-human ENCAB000BFY DNA SDS formaldehyde False 2018-01-16 ENCODE 1, 2 ENCFF016WHL 13450025 ENCODE Processing Pipeline c746b27fe92f16d54123e0c7034d1a99 https://www.encodeproject.org/files/ENCFF573DIV/@@download/ENCFF573DIV.bigBed hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF881XQF bed narrowPeak optimal idr thresholded peaks ENCSR603REQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens PCBP2-human ENCAB000BFY DNA SDS formaldehyde False 2018-01-16 ENCODE 1, 2 ENCFF001TDO, ENCFF016WHL, ENCFF467EXO, ENCFF554MYS 47460 ENCODE Processing Pipeline 3ba52950fce22dbd107dae09bd3ed496 https://www.encodeproject.org/files/ENCFF881XQF/@@download/ENCFF881XQF.bed.gz hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF970WJK bed narrowPeak conservative idr thresholded peaks ENCSR603REQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens PCBP2-human ENCAB000BFY DNA SDS formaldehyde False 2018-01-16 ENCODE 1, 2 ENCFF001TDO, ENCFF016WHL, ENCFF467EXO, ENCFF554MYS 34498 ENCODE Processing Pipeline b1c79f0e8f2be53da78995e55d187a64 https://www.encodeproject.org/files/ENCFF970WJK/@@download/ENCFF970WJK.bed.gz hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF257JFV bigBed narrowPeak conservative idr thresholded peaks ENCSR603REQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens PCBP2-human ENCAB000BFY DNA SDS formaldehyde False 2018-01-16 ENCODE 1, 2 ENCFF970WJK 111709 ENCODE Processing Pipeline 6680d0ab622206688e1306dc3b5204e7 https://www.encodeproject.org/files/ENCFF257JFV/@@download/ENCFF257JFV.bigBed hg19 released low read depth, mild to moderate bottlenecking, low read length, moderate library complexity experiment not submitted to GEO poor library complexity, severe bottlenecking ENCFF972RFP fastq reads ENCSR594BNR ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPL-human ENCAB000AVZ DNA SDS formaldehyde False 2017-02-27 ENCODE 1 1 40 single-ended 640240478 Xiang-Dong Fu, UCSD e7155c49ad37490989472f88a38495e2 SRA:SRR6213905 https://www.encodeproject.org/files/ENCFF972RFP/@@download/ENCFF972RFP.fastq.gz Illumina HiSeq 2500 /files/ENCFF089EYX/ released low read depth, mild to moderate bottlenecking, low read length ENCFF698TRM fastq reads ENCSR594BNR ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPL-human ENCAB000AVZ DNA SDS formaldehyde False 2017-02-27 ENCODE 2 1 40 single-ended 700519321 Xiang-Dong Fu, UCSD 423242cefe4d816746e2e884dc1baac3 SRA:SRR6213906 https://www.encodeproject.org/files/ENCFF698TRM/@@download/ENCFF698TRM.fastq.gz Illumina HiSeq 2500 /files/ENCFF419XJY/ released low read depth, mild to moderate bottlenecking, low read length ENCFF573SRY bam alignments ENCSR594BNR ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPL-human ENCAB000AVZ DNA SDS formaldehyde False 2017-02-27 ENCODE 1 40 ENCFF807MUK, ENCFF972RFP 565103063 ENCODE Processing Pipeline 0064307108ebc18f812bbb43e8d2f708 https://www.encodeproject.org/files/ENCFF573SRY/@@download/ENCFF573SRY.bam hg19 released low read depth, mild to moderate bottlenecking, low read length ENCFF285OGB bam unfiltered alignments ENCSR594BNR ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPL-human ENCAB000AVZ DNA SDS formaldehyde False 2017-02-27 ENCODE 2 40 ENCFF698TRM, ENCFF807MUK 933852243 ENCODE Processing Pipeline 04c4140041b1d3d06f012a8a6a106db9 https://www.encodeproject.org/files/ENCFF285OGB/@@download/ENCFF285OGB.bam hg19 released low read depth, mild to moderate bottlenecking, low read length ENCFF514LUN bam alignments ENCSR594BNR ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPL-human ENCAB000AVZ DNA SDS formaldehyde False 2017-02-27 ENCODE 2 40 ENCFF698TRM, ENCFF807MUK 585278677 ENCODE Processing Pipeline 57be23c40c7ef7ee8de8fba986e3c9e8 https://www.encodeproject.org/files/ENCFF514LUN/@@download/ENCFF514LUN.bam hg19 released low read depth, mild to moderate bottlenecking, low read length ENCFF260ZIQ bam unfiltered alignments ENCSR594BNR ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPL-human ENCAB000AVZ DNA SDS formaldehyde False 2017-02-27 ENCODE 1 40 ENCFF807MUK, ENCFF972RFP 863376076 ENCODE Processing Pipeline c8fe7049d05c196bf40a23c8b6695dea https://www.encodeproject.org/files/ENCFF260ZIQ/@@download/ENCFF260ZIQ.bam hg19 released low read depth, mild to moderate bottlenecking, low read length ENCFF026PAK bam alignments ENCSR594BNR ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPL-human ENCAB000AVZ DNA SDS formaldehyde False 2017-02-27 ENCODE 1 40 ENCFF643CGH, ENCFF972RFP 564497431 ENCODE Processing Pipeline 441207bf3f75ff61875370b542ff06b4 https://www.encodeproject.org/files/ENCFF026PAK/@@download/ENCFF026PAK.bam GRCh38 released low read depth, mild to moderate bottlenecking, low read length ENCFF245TRX bam unfiltered alignments ENCSR594BNR ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPL-human ENCAB000AVZ DNA SDS formaldehyde False 2017-02-27 ENCODE 1 40 ENCFF643CGH, ENCFF972RFP 867097093 ENCODE Processing Pipeline 019897aa52b89c2b295cc355ba58da73 https://www.encodeproject.org/files/ENCFF245TRX/@@download/ENCFF245TRX.bam GRCh38 released low read depth, mild to moderate bottlenecking, low read length ENCFF336VGN bam unfiltered alignments ENCSR594BNR ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPL-human ENCAB000AVZ DNA SDS formaldehyde False 2017-02-27 ENCODE 2 40 ENCFF643CGH, ENCFF698TRM 938092148 ENCODE Processing Pipeline 8ef898f4e412d33d53b1d11ce89c8687 https://www.encodeproject.org/files/ENCFF336VGN/@@download/ENCFF336VGN.bam GRCh38 released low read depth, mild to moderate bottlenecking, low read length ENCFF439AGS bam alignments ENCSR594BNR ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPL-human ENCAB000AVZ DNA SDS formaldehyde False 2017-02-27 ENCODE 2 40 ENCFF643CGH, ENCFF698TRM 584700841 ENCODE Processing Pipeline 500f51497123938f331f5e19f80d3061 https://www.encodeproject.org/files/ENCFF439AGS/@@download/ENCFF439AGS.bam GRCh38 released low read depth, mild to moderate bottlenecking, low read length ENCFF949TAT bigWig fold change over control ENCSR594BNR ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPL-human ENCAB000AVZ DNA SDS formaldehyde False 2017-02-27 ENCODE 1 ENCFF456BYT, ENCFF573SRY 359801835 ENCODE Processing Pipeline 3ba4a2ff636aeb87bcb05a19e319f957 https://www.encodeproject.org/files/ENCFF949TAT/@@download/ENCFF949TAT.bigWig hg19 released low read depth, mild to moderate bottlenecking, low read length ENCFF952MRN bigWig signal p-value ENCSR594BNR ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPL-human ENCAB000AVZ DNA SDS formaldehyde False 2017-02-27 ENCODE 2 ENCFF321CYT, ENCFF514LUN 544660129 ENCODE Processing Pipeline 25a562e2f6619d86b848ec6d796365e5 https://www.encodeproject.org/files/ENCFF952MRN/@@download/ENCFF952MRN.bigWig hg19 released low read depth, mild to moderate bottlenecking, low read length ENCFF318WXW bigWig signal p-value ENCSR594BNR ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPL-human ENCAB000AVZ DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF321CYT, ENCFF456BYT, ENCFF514LUN, ENCFF573SRY 914790219 ENCODE Processing Pipeline 056ef0b4885227c628399cf29dea1ffb https://www.encodeproject.org/files/ENCFF318WXW/@@download/ENCFF318WXW.bigWig hg19 released low read depth, mild to moderate bottlenecking, low read length ENCFF667AJI bigWig signal p-value ENCSR594BNR ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPL-human ENCAB000AVZ DNA SDS formaldehyde False 2017-02-27 ENCODE 1 ENCFF456BYT, ENCFF573SRY 576407984 ENCODE Processing Pipeline a4bc8942795dfd5ed2d1b82db2ef2a78 https://www.encodeproject.org/files/ENCFF667AJI/@@download/ENCFF667AJI.bigWig hg19 released low read depth, mild to moderate bottlenecking, low read length ENCFF136KKG bigWig fold change over control ENCSR594BNR ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPL-human ENCAB000AVZ DNA SDS formaldehyde False 2017-02-27 ENCODE 2 ENCFF321CYT, ENCFF514LUN 411898226 ENCODE Processing Pipeline adffaae42bb1475b8b3a8f71e218c0ec https://www.encodeproject.org/files/ENCFF136KKG/@@download/ENCFF136KKG.bigWig hg19 released low read depth, mild to moderate bottlenecking, low read length ENCFF174JFC bigWig fold change over control ENCSR594BNR ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPL-human ENCAB000AVZ DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF321CYT, ENCFF456BYT, ENCFF514LUN, ENCFF573SRY 884348625 ENCODE Processing Pipeline a71a463719aa6526fa2f18108728c3ca https://www.encodeproject.org/files/ENCFF174JFC/@@download/ENCFF174JFC.bigWig hg19 released low read depth, mild to moderate bottlenecking, low read length ENCFF501SMZ bed narrowPeak peaks ENCSR594BNR ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPL-human ENCAB000AVZ DNA SDS formaldehyde False 2017-02-27 ENCODE 1 ENCFF456BYT, ENCFF573SRY 5315049 ENCODE Processing Pipeline 42017006100aada57107d4935adbead8 https://www.encodeproject.org/files/ENCFF501SMZ/@@download/ENCFF501SMZ.bed.gz hg19 released low read depth, mild to moderate bottlenecking, low read length ENCFF013REF bed narrowPeak peaks ENCSR594BNR ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPL-human ENCAB000AVZ DNA SDS formaldehyde False 2017-02-27 ENCODE 2 ENCFF321CYT, ENCFF514LUN 5482870 ENCODE Processing Pipeline 2f77da514212a67e6b9b46c0f1f7fb40 https://www.encodeproject.org/files/ENCFF013REF/@@download/ENCFF013REF.bed.gz hg19 released low read depth, mild to moderate bottlenecking, low read length ENCFF524TKP bigBed narrowPeak peaks ENCSR594BNR ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPL-human ENCAB000AVZ DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF838LKB 13455854 ENCODE Processing Pipeline 2ee155d21f28c9a988ac51b18d8edbd4 https://www.encodeproject.org/files/ENCFF524TKP/@@download/ENCFF524TKP.bigBed hg19 released low read depth, mild to moderate bottlenecking, low read length ENCFF643VQE bigBed narrowPeak optimal idr thresholded peaks ENCSR594BNR ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPL-human ENCAB000AVZ DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF010STZ 349964 ENCODE Processing Pipeline 161b24d5691c1fac3c987bf56017eb9f https://www.encodeproject.org/files/ENCFF643VQE/@@download/ENCFF643VQE.bigBed hg19 released low read depth, mild to moderate bottlenecking, low read length ENCFF838LKB bed narrowPeak peaks ENCSR594BNR ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPL-human ENCAB000AVZ DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF321CYT, ENCFF456BYT, ENCFF514LUN, ENCFF573SRY 6696807 ENCODE Processing Pipeline bda0d47c90aa43da4a155d81eda82233 https://www.encodeproject.org/files/ENCFF838LKB/@@download/ENCFF838LKB.bed.gz hg19 released low read depth, mild to moderate bottlenecking, low read length ENCFF119JMJ bigBed narrowPeak peaks ENCSR594BNR ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPL-human ENCAB000AVZ DNA SDS formaldehyde False 2017-02-27 ENCODE 1 ENCFF501SMZ 13294736 ENCODE Processing Pipeline 2ca3c90fbb2c7790eb9677826e54be51 https://www.encodeproject.org/files/ENCFF119JMJ/@@download/ENCFF119JMJ.bigBed hg19 released low read depth, mild to moderate bottlenecking, low read length ENCFF650VQU bed narrowPeak conservative idr thresholded peaks ENCSR594BNR ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPL-human ENCAB000AVZ DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF001TDO, ENCFF013REF, ENCFF501SMZ, ENCFF838LKB 128541 ENCODE Processing Pipeline 4a3962a08ffd5b8a05af4443c46c931f https://www.encodeproject.org/files/ENCFF650VQU/@@download/ENCFF650VQU.bed.gz hg19 released low read depth, mild to moderate bottlenecking, low read length ENCFF283DWT bigBed narrowPeak conservative idr thresholded peaks ENCSR594BNR ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPL-human ENCAB000AVZ DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF650VQU 327566 ENCODE Processing Pipeline 0eb497f339f2a88163039bdbece28cc3 https://www.encodeproject.org/files/ENCFF283DWT/@@download/ENCFF283DWT.bigBed hg19 released low read depth, mild to moderate bottlenecking, low read length ENCFF025CAN bigBed narrowPeak peaks ENCSR594BNR ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPL-human ENCAB000AVZ DNA SDS formaldehyde False 2017-02-27 ENCODE 2 ENCFF013REF 13320293 ENCODE Processing Pipeline 8ef63a9e949e250031a8d99b8b8e165b https://www.encodeproject.org/files/ENCFF025CAN/@@download/ENCFF025CAN.bigBed hg19 released low read depth, mild to moderate bottlenecking, low read length ENCFF010STZ bed narrowPeak optimal idr thresholded peaks ENCSR594BNR ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPL-human ENCAB000AVZ DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF001TDO, ENCFF013REF, ENCFF501SMZ, ENCFF838LKB 141550 ENCODE Processing Pipeline 96e79c69c0c270cedd9c75735c44d6bf https://www.encodeproject.org/files/ENCFF010STZ/@@download/ENCFF010STZ.bed.gz hg19 released low read depth, mild to moderate bottlenecking, low read length ENCFF906WLY bigWig signal p-value ENCSR594BNR ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPL-human ENCAB000AVZ DNA SDS formaldehyde False 2017-02-27 ENCODE 1 ENCFF026PAK, ENCFF661ZRO 549227799 ENCODE Processing Pipeline bd3498699e0317ef88445200632e3eb1 https://www.encodeproject.org/files/ENCFF906WLY/@@download/ENCFF906WLY.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, low read length ENCFF820AIH bigWig signal p-value ENCSR594BNR ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPL-human ENCAB000AVZ DNA SDS formaldehyde False 2017-02-27 ENCODE 2 ENCFF439AGS, ENCFF872FDX 544032928 ENCODE Processing Pipeline 4e14bad58e6b3513a96d831f03e6f3f3 https://www.encodeproject.org/files/ENCFF820AIH/@@download/ENCFF820AIH.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, low read length ENCFF731YBN bigWig fold change over control ENCSR594BNR ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPL-human ENCAB000AVZ DNA SDS formaldehyde False 2017-02-27 ENCODE 2 ENCFF439AGS, ENCFF872FDX 411244153 ENCODE Processing Pipeline 06994a7274ef77ab12f37a5b2a803cca https://www.encodeproject.org/files/ENCFF731YBN/@@download/ENCFF731YBN.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, low read length ENCFF076EFI bigBed narrowPeak peaks ENCSR594BNR ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPL-human ENCAB000AVZ DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF738KOC 13481541 ENCODE Processing Pipeline 15643233bec85abae965dd0a4c7fcf46 https://www.encodeproject.org/files/ENCFF076EFI/@@download/ENCFF076EFI.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, low read length ENCFF984ESZ bed narrowPeak optimal idr thresholded peaks ENCSR594BNR ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPL-human ENCAB000AVZ DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF384TDQ, ENCFF419RSJ, ENCFF738KOC, ENCFF828TKC 143082 ENCODE Processing Pipeline 0a672143b873eb78e87ffda8ffbbe0c8 https://www.encodeproject.org/files/ENCFF984ESZ/@@download/ENCFF984ESZ.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, low read length ENCFF137KQF bigWig signal p-value ENCSR594BNR ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPL-human ENCAB000AVZ DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF026PAK, ENCFF439AGS, ENCFF661ZRO, ENCFF872FDX 936256418 ENCODE Processing Pipeline 146dd280219c5d22340550b64e72dd24 https://www.encodeproject.org/files/ENCFF137KQF/@@download/ENCFF137KQF.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, low read length ENCFF828TKC bed narrowPeak peaks ENCSR594BNR ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPL-human ENCAB000AVZ DNA SDS formaldehyde False 2017-02-27 ENCODE 1 ENCFF026PAK, ENCFF661ZRO 5292964 ENCODE Processing Pipeline 7acf50d0cbbb4cf7f9cf4d64aeeba7e4 https://www.encodeproject.org/files/ENCFF828TKC/@@download/ENCFF828TKC.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, low read length ENCFF384TDQ bed narrowPeak peaks ENCSR594BNR ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPL-human ENCAB000AVZ DNA SDS formaldehyde False 2017-02-27 ENCODE 2 ENCFF439AGS, ENCFF872FDX 5488590 ENCODE Processing Pipeline d87ae6afd879c71992dd42a897adc9ea https://www.encodeproject.org/files/ENCFF384TDQ/@@download/ENCFF384TDQ.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, low read length ENCFF447DXS bigWig fold change over control ENCSR594BNR ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPL-human ENCAB000AVZ DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF026PAK, ENCFF439AGS, ENCFF661ZRO, ENCFF872FDX 892164033 ENCODE Processing Pipeline 4984ee4d6cb8f41e1c07958bc0f41af1 https://www.encodeproject.org/files/ENCFF447DXS/@@download/ENCFF447DXS.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, low read length ENCFF738KOC bed narrowPeak peaks ENCSR594BNR ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPL-human ENCAB000AVZ DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF026PAK, ENCFF439AGS, ENCFF661ZRO, ENCFF872FDX 6685151 ENCODE Processing Pipeline 1c1b507976eb9ad7829632e911bc828a https://www.encodeproject.org/files/ENCFF738KOC/@@download/ENCFF738KOC.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, low read length ENCFF490ZXD bigWig fold change over control ENCSR594BNR ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPL-human ENCAB000AVZ DNA SDS formaldehyde False 2017-02-27 ENCODE 1 ENCFF026PAK, ENCFF661ZRO 380957216 ENCODE Processing Pipeline 53d9a51f010d5c81a314a755a815e288 https://www.encodeproject.org/files/ENCFF490ZXD/@@download/ENCFF490ZXD.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, low read length ENCFF752BIP bigBed narrowPeak peaks ENCSR594BNR ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPL-human ENCAB000AVZ DNA SDS formaldehyde False 2017-02-27 ENCODE 1 ENCFF828TKC 13306284 ENCODE Processing Pipeline df9f98fd1277a0614e417851a4463256 https://www.encodeproject.org/files/ENCFF752BIP/@@download/ENCFF752BIP.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, low read length ENCFF682JRN bed narrowPeak conservative idr thresholded peaks ENCSR594BNR ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPL-human ENCAB000AVZ DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF384TDQ, ENCFF419RSJ, ENCFF738KOC, ENCFF828TKC 129344 ENCODE Processing Pipeline 6fe2f9239e018acc1f6c8c6113b43bab https://www.encodeproject.org/files/ENCFF682JRN/@@download/ENCFF682JRN.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, low read length ENCFF681DNE bigBed narrowPeak peaks ENCSR594BNR ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPL-human ENCAB000AVZ DNA SDS formaldehyde False 2017-02-27 ENCODE 2 ENCFF384TDQ 13332652 ENCODE Processing Pipeline f48ae2a6acac426517093227752a95aa https://www.encodeproject.org/files/ENCFF681DNE/@@download/ENCFF681DNE.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, low read length ENCFF629GYT bigBed narrowPeak conservative idr thresholded peaks ENCSR594BNR ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPL-human ENCAB000AVZ DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF682JRN 331113 ENCODE Processing Pipeline 79a27fb32be06cd374eed2c2a380efa9 https://www.encodeproject.org/files/ENCFF629GYT/@@download/ENCFF629GYT.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, low read length ENCFF779NTZ bigBed narrowPeak optimal idr thresholded peaks ENCSR594BNR ChIP-seq EFO:0002067 K562 cell line Homo sapiens HNRNPL-human ENCAB000AVZ DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF984ESZ 354789 ENCODE Processing Pipeline a8ce785f0461e6d84413693e7eb7dabb https://www.encodeproject.org/files/ENCFF779NTZ/@@download/ENCFF779NTZ.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, low read length ENCFF777JFA fastq reads ENCSR608XTF ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB790JUW DNA False 2016-11-17 ENCODE 1 1 100 paired-ended 1 ENCFF141NUM 2242523270 Michael Snyder, Stanford 8d5328c45a3c93068cf26ea0b688fcf7 https://www.encodeproject.org/files/ENCFF777JFA/@@download/ENCFF777JFA.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFF/ archived borderline replicate concordance, inconsistent platforms, mild to moderate bottlenecking ENCFF742JMT fastq reads ENCSR608XTF ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB790JUW DNA False 2016-11-17 ENCODE 2 1 100 paired-ended 2 ENCFF470MPB 6228114508 Michael Snyder, Stanford 78b5cf4012603d88cff82334854fc9c4 SRA:SRR6213108 https://www.encodeproject.org/files/ENCFF742JMT/@@download/ENCFF742JMT.fastq.gz Illumina HiSeq 4000 /files/ENCFF837MIV/ released borderline replicate concordance, inconsistent platforms, mild to moderate bottlenecking ENCFF141NUM fastq reads ENCSR608XTF ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB790JUW DNA False 2016-11-17 ENCODE 1 1 100 paired-ended 2 ENCFF777JFA 2307058670 Michael Snyder, Stanford 5a50af7dcc490cf9871cc257700ea44f https://www.encodeproject.org/files/ENCFF141NUM/@@download/ENCFF141NUM.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFH/ archived borderline replicate concordance, inconsistent platforms, mild to moderate bottlenecking ENCFF470MPB fastq reads ENCSR608XTF ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB790JUW DNA False 2016-11-17 ENCODE 2 1 100 paired-ended 1 ENCFF742JMT 5564614852 Michael Snyder, Stanford a87658f51c5d2e9d6dda6b65567f634d SRA:SRR6213108 https://www.encodeproject.org/files/ENCFF470MPB/@@download/ENCFF470MPB.fastq.gz Illumina HiSeq 4000 /files/ENCFF259GQA/ released borderline replicate concordance, inconsistent platforms, mild to moderate bottlenecking ENCFF115IJR bam alignments ENCSR608XTF ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB790JUW DNA False 2016-11-17 ENCODE 1 100 ENCFF141NUM, ENCFF777JFA, ENCFF807MUK 4118616800 ENCODE Processing Pipeline b01bd434e24ad2f0e780750fbba299cd https://www.encodeproject.org/files/ENCFF115IJR/@@download/ENCFF115IJR.bam hg19 archived borderline replicate concordance, inconsistent platforms, mild to moderate bottlenecking ENCFF719JNQ bam alignments ENCSR608XTF ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB790JUW DNA False 2016-11-17 ENCODE 2 100 ENCFF470MPB, ENCFF742JMT, ENCFF807MUK 7648065426 ENCODE Processing Pipeline 1d5bc3a6b8b7af93e02676aa5b54e3c7 https://www.encodeproject.org/files/ENCFF719JNQ/@@download/ENCFF719JNQ.bam hg19 released borderline replicate concordance, inconsistent platforms, mild to moderate bottlenecking ENCFF446JLZ fastq reads ENCSR608XTF ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB790JUW DNA False 2016-11-17 ENCODE 1 1 100 paired-ended 1 ENCFF411FCT 3885263651 Michael Snyder, Stanford e1149dc6b54e8b078f6fc9f7df176ada SRA:SRR6213107 https://www.encodeproject.org/files/ENCFF446JLZ/@@download/ENCFF446JLZ.fastq.gz Illumina HiSeq 4000 /files/ENCFF498JMO/ released borderline replicate concordance, inconsistent platforms, mild to moderate bottlenecking ENCFF411FCT fastq reads ENCSR608XTF ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB790JUW DNA False 2016-11-17 ENCODE 1 1 100 paired-ended 2 ENCFF446JLZ 4510894710 Michael Snyder, Stanford 5e671b45e6680dd13783112b86665895 SRA:SRR6213107 https://www.encodeproject.org/files/ENCFF411FCT/@@download/ENCFF411FCT.fastq.gz Illumina HiSeq 4000 /files/ENCFF502GTS/ released borderline replicate concordance, inconsistent platforms, mild to moderate bottlenecking ENCFF700UIV bam unfiltered alignments ENCSR608XTF ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB790JUW DNA False 2016-11-17 ENCODE 1 100 ENCFF411FCT, ENCFF446JLZ, ENCFF643CGH 7710576948 ENCODE Processing Pipeline 5a45fbf0f2c16f5ed898a509f4f6523a https://www.encodeproject.org/files/ENCFF700UIV/@@download/ENCFF700UIV.bam GRCh38 released borderline replicate concordance, inconsistent platforms, mild to moderate bottlenecking ENCFF215XET bam unfiltered alignments ENCSR608XTF ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB790JUW DNA False 2016-11-17 ENCODE 2 100 ENCFF470MPB, ENCFF643CGH, ENCFF742JMT 10445631188 ENCODE Processing Pipeline ba55922fed8605ef182d4d6da0d123d5 https://www.encodeproject.org/files/ENCFF215XET/@@download/ENCFF215XET.bam GRCh38 released borderline replicate concordance, inconsistent platforms, mild to moderate bottlenecking ENCFF779IQL bam alignments ENCSR608XTF ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB790JUW DNA False 2016-11-17 ENCODE 1 100 ENCFF411FCT, ENCFF446JLZ, ENCFF643CGH 5647704314 ENCODE Processing Pipeline 18bd57301631aed1d28957980a5ce389 https://www.encodeproject.org/files/ENCFF779IQL/@@download/ENCFF779IQL.bam GRCh38 released borderline replicate concordance, inconsistent platforms, mild to moderate bottlenecking ENCFF257OOQ bam alignments ENCSR608XTF ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB790JUW DNA False 2016-11-17 ENCODE 2 100 ENCFF470MPB, ENCFF643CGH, ENCFF742JMT 7653691891 ENCODE Processing Pipeline a82e2cdcf3bf82fc2d70a0f1c966f14d https://www.encodeproject.org/files/ENCFF257OOQ/@@download/ENCFF257OOQ.bam GRCh38 released borderline replicate concordance, inconsistent platforms, mild to moderate bottlenecking ENCFF804PQQ bigWig signal p-value ENCSR608XTF ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB790JUW DNA False 2016-11-17 ENCODE 1 ENCFF712WXB, ENCFF779IQL, ENCFF790TAN 1958899672 ENCODE Processing Pipeline 2ecc813f7a0de60b2848298d30339ba9 https://www.encodeproject.org/files/ENCFF804PQQ/@@download/ENCFF804PQQ.bigWig GRCh38 released borderline replicate concordance, inconsistent platforms, mild to moderate bottlenecking ENCFF055TWA bigWig signal p-value ENCSR608XTF ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB790JUW DNA False 2016-11-17 ENCODE 2 ENCFF257OOQ, ENCFF712WXB 1531093249 ENCODE Processing Pipeline b6b35b4f8e3af7e03c944fa0a2fb9f6c https://www.encodeproject.org/files/ENCFF055TWA/@@download/ENCFF055TWA.bigWig GRCh38 released borderline replicate concordance, inconsistent platforms, mild to moderate bottlenecking ENCFF865NQN bigWig signal p-value ENCSR608XTF ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB790JUW DNA False 2016-11-17 ENCODE 1, 2 ENCFF257OOQ, ENCFF712WXB, ENCFF779IQL, ENCFF790TAN 2365664177 ENCODE Processing Pipeline e52556a7bd3883f4db84a6c2c666a2db https://www.encodeproject.org/files/ENCFF865NQN/@@download/ENCFF865NQN.bigWig GRCh38 released borderline replicate concordance, inconsistent platforms, mild to moderate bottlenecking ENCFF243PYG bigWig fold change over control ENCSR608XTF ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB790JUW DNA False 2016-11-17 ENCODE 1 ENCFF712WXB, ENCFF779IQL, ENCFF790TAN 2011278628 ENCODE Processing Pipeline ad53ff636245fa4a76cff63f8ec25f7a https://www.encodeproject.org/files/ENCFF243PYG/@@download/ENCFF243PYG.bigWig GRCh38 released borderline replicate concordance, inconsistent platforms, mild to moderate bottlenecking ENCFF450XZC bigWig fold change over control ENCSR608XTF ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB790JUW DNA False 2016-11-17 ENCODE 2 ENCFF257OOQ, ENCFF712WXB 2045803340 ENCODE Processing Pipeline 5a3de590e51d8ab4df8e4525e6de5525 https://www.encodeproject.org/files/ENCFF450XZC/@@download/ENCFF450XZC.bigWig GRCh38 released borderline replicate concordance, inconsistent platforms, mild to moderate bottlenecking ENCFF336ZFU bigWig fold change over control ENCSR608XTF ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB790JUW DNA False 2016-11-17 ENCODE 1, 2 ENCFF257OOQ, ENCFF712WXB, ENCFF779IQL, ENCFF790TAN 4064375361 ENCODE Processing Pipeline b36cf072de4d0e166341d42842831c93 https://www.encodeproject.org/files/ENCFF336ZFU/@@download/ENCFF336ZFU.bigWig GRCh38 released borderline replicate concordance, inconsistent platforms, mild to moderate bottlenecking ENCFF845XVK bed narrowPeak peaks ENCSR608XTF ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB790JUW DNA False 2016-11-17 ENCODE 1, 2 ENCFF257OOQ, ENCFF712WXB, ENCFF779IQL, ENCFF790TAN 7376735 ENCODE Processing Pipeline 1d26ebf3c1f9e99501878d213800902e https://www.encodeproject.org/files/ENCFF845XVK/@@download/ENCFF845XVK.bed.gz GRCh38 released borderline replicate concordance, inconsistent platforms, mild to moderate bottlenecking ENCFF958TGL bed narrowPeak peaks ENCSR608XTF ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB790JUW DNA False 2016-11-17 ENCODE 2 ENCFF257OOQ, ENCFF712WXB 7323182 ENCODE Processing Pipeline 23970b7cb7ad48e4cf709d42492a44b7 https://www.encodeproject.org/files/ENCFF958TGL/@@download/ENCFF958TGL.bed.gz GRCh38 released borderline replicate concordance, inconsistent platforms, mild to moderate bottlenecking ENCFF269JKK bed narrowPeak peaks ENCSR608XTF ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB790JUW DNA False 2016-11-17 ENCODE 1 ENCFF712WXB, ENCFF779IQL, ENCFF790TAN 7262523 ENCODE Processing Pipeline e332104f07fa650f7a4071ecb253f7ec https://www.encodeproject.org/files/ENCFF269JKK/@@download/ENCFF269JKK.bed.gz GRCh38 released borderline replicate concordance, inconsistent platforms, mild to moderate bottlenecking ENCFF630KHM bigBed narrowPeak peaks ENCSR608XTF ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB790JUW DNA False 2016-11-17 ENCODE 1 ENCFF269JKK 12940959 ENCODE Processing Pipeline cee155264ae468ca9b7433f900d5436e https://www.encodeproject.org/files/ENCFF630KHM/@@download/ENCFF630KHM.bigBed GRCh38 released borderline replicate concordance, inconsistent platforms, mild to moderate bottlenecking ENCFF869UBF bigBed narrowPeak peaks ENCSR608XTF ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB790JUW DNA False 2016-11-17 ENCODE 2 ENCFF958TGL 12803549 ENCODE Processing Pipeline 54cc4f621b76255fad5523f198a5a115 https://www.encodeproject.org/files/ENCFF869UBF/@@download/ENCFF869UBF.bigBed GRCh38 released borderline replicate concordance, inconsistent platforms, mild to moderate bottlenecking ENCFF556WVT bigBed narrowPeak peaks ENCSR608XTF ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB790JUW DNA False 2016-11-17 ENCODE 1, 2 ENCFF845XVK 12832098 ENCODE Processing Pipeline 14b7fec708fadcf4fa4e23a80eacb230 https://www.encodeproject.org/files/ENCFF556WVT/@@download/ENCFF556WVT.bigBed GRCh38 released borderline replicate concordance, inconsistent platforms, mild to moderate bottlenecking ENCFF389LKZ bed narrowPeak conservative idr thresholded peaks ENCSR608XTF ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB790JUW DNA False 2016-11-17 ENCODE 1, 2 ENCFF269JKK, ENCFF419RSJ, ENCFF845XVK, ENCFF958TGL 72508 ENCODE Processing Pipeline 2a8f74f2a62d28f9df97c65648d86c32 https://www.encodeproject.org/files/ENCFF389LKZ/@@download/ENCFF389LKZ.bed.gz GRCh38 released borderline replicate concordance, inconsistent platforms, mild to moderate bottlenecking ENCFF462AZY bed narrowPeak optimal idr thresholded peaks ENCSR608XTF ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB790JUW DNA False 2016-11-17 ENCODE 1, 2 ENCFF269JKK, ENCFF419RSJ, ENCFF845XVK, ENCFF958TGL 733892 ENCODE Processing Pipeline 5a66428f408e8eb4593f0ec2663cebff https://www.encodeproject.org/files/ENCFF462AZY/@@download/ENCFF462AZY.bed.gz GRCh38 released borderline replicate concordance, inconsistent platforms, mild to moderate bottlenecking ENCFF239KJX bigBed narrowPeak conservative idr thresholded peaks ENCSR608XTF ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB790JUW DNA False 2016-11-17 ENCODE 1, 2 ENCFF389LKZ 204189 ENCODE Processing Pipeline 212fd7f5d28478f8153bef40b4dcb473 https://www.encodeproject.org/files/ENCFF239KJX/@@download/ENCFF239KJX.bigBed GRCh38 released borderline replicate concordance, inconsistent platforms, mild to moderate bottlenecking ENCFF173PIB bigBed narrowPeak optimal idr thresholded peaks ENCSR608XTF ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB790JUW DNA False 2016-11-17 ENCODE 1, 2 ENCFF462AZY 1600943 ENCODE Processing Pipeline f76d7e72109297e21d6afec972d14d55 https://www.encodeproject.org/files/ENCFF173PIB/@@download/ENCFF173PIB.bigBed GRCh38 released borderline replicate concordance, inconsistent platforms, mild to moderate bottlenecking ENCFF136BWS bigWig signal p-value ENCSR608XTF ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB790JUW DNA False 2016-11-17 ENCODE 1, 2 ENCFF115IJR, ENCFF581ZJL, ENCFF719JNQ, ENCFF834TUP 2416422437 ENCODE Processing Pipeline 5fa45cef0eb199e5215eea66b9a0322a https://www.encodeproject.org/files/ENCFF136BWS/@@download/ENCFF136BWS.bigWig hg19 archived borderline replicate concordance, inconsistent platforms, mild to moderate bottlenecking ENCFF458MAY bigWig fold change over control ENCSR608XTF ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB790JUW DNA False 2016-11-17 ENCODE 1, 2 ENCFF115IJR, ENCFF581ZJL, ENCFF719JNQ, ENCFF834TUP 2647721818 ENCODE Processing Pipeline 189bf930ab83f3ab90559ec3242c0333 https://www.encodeproject.org/files/ENCFF458MAY/@@download/ENCFF458MAY.bigWig hg19 archived borderline replicate concordance, inconsistent platforms, mild to moderate bottlenecking ENCFF699AFV bed narrowPeak peaks ENCSR608XTF ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB790JUW DNA False 2016-11-17 ENCODE 1 ENCFF115IJR, ENCFF581ZJL 6920391 ENCODE Processing Pipeline 3734147554a35fa56a7b48010c1acc1c https://www.encodeproject.org/files/ENCFF699AFV/@@download/ENCFF699AFV.bed.gz hg19 archived borderline replicate concordance, inconsistent platforms, mild to moderate bottlenecking ENCFF825OFB bed narrowPeak peaks ENCSR608XTF ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB790JUW DNA False 2016-11-17 ENCODE 1, 2 ENCFF115IJR, ENCFF581ZJL, ENCFF719JNQ, ENCFF834TUP 7320849 ENCODE Processing Pipeline e93a9deadf9e512d2fc0472f2464bca1 https://www.encodeproject.org/files/ENCFF825OFB/@@download/ENCFF825OFB.bed.gz hg19 archived borderline replicate concordance, inconsistent platforms, mild to moderate bottlenecking ENCFF902DIA bam unfiltered alignments ENCSR608XTF ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB790JUW DNA False 2016-11-17 ENCODE 1 100 ENCFF411FCT, ENCFF446JLZ, ENCFF807MUK 7705289488 ENCODE Processing Pipeline 872713338bab41207511318af3af9d35 https://www.encodeproject.org/files/ENCFF902DIA/@@download/ENCFF902DIA.bam hg19 released borderline replicate concordance, inconsistent platforms, mild to moderate bottlenecking ENCFF521MJN bam alignments ENCSR608XTF ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB790JUW DNA False 2016-11-17 ENCODE 1 100 ENCFF411FCT, ENCFF446JLZ, ENCFF807MUK 5643757224 ENCODE Processing Pipeline 5247f36fa90ea7374503cb8dd706b2a1 https://www.encodeproject.org/files/ENCFF521MJN/@@download/ENCFF521MJN.bam hg19 released borderline replicate concordance, inconsistent platforms, mild to moderate bottlenecking ENCFF457GMM bam unfiltered alignments ENCSR608XTF ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB790JUW DNA False 2016-11-17 ENCODE 2 100 ENCFF470MPB, ENCFF742JMT, ENCFF807MUK 10441850792 ENCODE Processing Pipeline f264c4d1aedb089de2f04afa035224de https://www.encodeproject.org/files/ENCFF457GMM/@@download/ENCFF457GMM.bam hg19 released borderline replicate concordance, inconsistent platforms, mild to moderate bottlenecking ENCFF514TGB bigWig signal p-value ENCSR608XTF ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB790JUW DNA False 2016-11-17 ENCODE 1 ENCFF160VXC, ENCFF521MJN, ENCFF834TUP 1929878767 ENCODE Processing Pipeline ca3bc69d4689c5ec6331b0590bc4cc53 https://www.encodeproject.org/files/ENCFF514TGB/@@download/ENCFF514TGB.bigWig hg19 released borderline replicate concordance, inconsistent platforms, mild to moderate bottlenecking ENCFF491QZV bigWig signal p-value ENCSR608XTF ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB790JUW DNA False 2016-11-17 ENCODE 2 ENCFF719JNQ, ENCFF834TUP 1525725909 ENCODE Processing Pipeline d75e5f2b8833463b441edafa3eb1134b https://www.encodeproject.org/files/ENCFF491QZV/@@download/ENCFF491QZV.bigWig hg19 released borderline replicate concordance, inconsistent platforms, mild to moderate bottlenecking ENCFF747MEU bigWig fold change over control ENCSR608XTF ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB790JUW DNA False 2016-11-17 ENCODE 1 ENCFF160VXC, ENCFF521MJN, ENCFF834TUP 2049521319 ENCODE Processing Pipeline 34f704825cc14ee824db1e4851907271 https://www.encodeproject.org/files/ENCFF747MEU/@@download/ENCFF747MEU.bigWig hg19 released borderline replicate concordance, inconsistent platforms, mild to moderate bottlenecking ENCFF321RTR bed narrowPeak conservative idr thresholded peaks ENCSR608XTF ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB790JUW DNA False 2016-11-17 ENCODE 1, 2 ENCFF001TDO, ENCFF059LBQ, ENCFF134OWN, ENCFF789DUE 73953 ENCODE Processing Pipeline dc65968bffa8e7abe16da8ab14e999d1 https://www.encodeproject.org/files/ENCFF321RTR/@@download/ENCFF321RTR.bed.gz hg19 released borderline replicate concordance, inconsistent platforms, mild to moderate bottlenecking ENCFF995JZT bigWig signal p-value ENCSR608XTF ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB790JUW DNA False 2016-11-17 ENCODE 1, 2 ENCFF160VXC, ENCFF521MJN, ENCFF719JNQ, ENCFF834TUP 2369730131 ENCODE Processing Pipeline 1284bcb645fde79271ee478b830e1e9c https://www.encodeproject.org/files/ENCFF995JZT/@@download/ENCFF995JZT.bigWig hg19 released borderline replicate concordance, inconsistent platforms, mild to moderate bottlenecking ENCFF848JRD bigBed narrowPeak peaks ENCSR608XTF ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB790JUW DNA False 2016-11-17 ENCODE 1 ENCFF059LBQ 12922926 ENCODE Processing Pipeline 39e8a5f6d792e595d30e7d988233ca98 https://www.encodeproject.org/files/ENCFF848JRD/@@download/ENCFF848JRD.bigBed hg19 released borderline replicate concordance, inconsistent platforms, mild to moderate bottlenecking ENCFF856VDO bigBed narrowPeak peaks ENCSR608XTF ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB790JUW DNA False 2016-11-17 ENCODE 2 ENCFF789DUE 12804933 ENCODE Processing Pipeline 77b1df659ebe71f543856b428911a5c0 https://www.encodeproject.org/files/ENCFF856VDO/@@download/ENCFF856VDO.bigBed hg19 released borderline replicate concordance, inconsistent platforms, mild to moderate bottlenecking ENCFF728YHT bigBed narrowPeak optimal idr thresholded peaks ENCSR608XTF ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB790JUW DNA False 2016-11-17 ENCODE 1, 2 ENCFF644WLI 1607170 ENCODE Processing Pipeline ff60925433a03c2d4c1214fffc0062d5 https://www.encodeproject.org/files/ENCFF728YHT/@@download/ENCFF728YHT.bigBed hg19 released borderline replicate concordance, inconsistent platforms, mild to moderate bottlenecking ENCFF320VKN bigWig fold change over control ENCSR608XTF ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB790JUW DNA False 2016-11-17 ENCODE 1, 2 ENCFF160VXC, ENCFF521MJN, ENCFF719JNQ, ENCFF834TUP 4069269344 ENCODE Processing Pipeline d1e6e2e0e01f54a4bcbae70984485628 https://www.encodeproject.org/files/ENCFF320VKN/@@download/ENCFF320VKN.bigWig hg19 released borderline replicate concordance, inconsistent platforms, mild to moderate bottlenecking ENCFF134OWN bed narrowPeak peaks ENCSR608XTF ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB790JUW DNA False 2016-11-17 ENCODE 1, 2 ENCFF160VXC, ENCFF521MJN, ENCFF719JNQ, ENCFF834TUP 7369817 ENCODE Processing Pipeline a6b3812bc035338f05a99e996dc4b4c6 https://www.encodeproject.org/files/ENCFF134OWN/@@download/ENCFF134OWN.bed.gz hg19 released borderline replicate concordance, inconsistent platforms, mild to moderate bottlenecking ENCFF644WLI bed narrowPeak optimal idr thresholded peaks ENCSR608XTF ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB790JUW DNA False 2016-11-17 ENCODE 1, 2 ENCFF001TDO, ENCFF059LBQ, ENCFF134OWN, ENCFF789DUE 740515 ENCODE Processing Pipeline 4a0a8623e3cb7340dd9ced9610ab18e2 https://www.encodeproject.org/files/ENCFF644WLI/@@download/ENCFF644WLI.bed.gz hg19 released borderline replicate concordance, inconsistent platforms, mild to moderate bottlenecking ENCFF804FSV bigWig fold change over control ENCSR608XTF ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB790JUW DNA False 2016-11-17 ENCODE 2 ENCFF719JNQ, ENCFF834TUP 2035784806 ENCODE Processing Pipeline f57c6a5e1e1c1b4237a26fb64a1279e2 https://www.encodeproject.org/files/ENCFF804FSV/@@download/ENCFF804FSV.bigWig hg19 released borderline replicate concordance, inconsistent platforms, mild to moderate bottlenecking ENCFF059LBQ bed narrowPeak peaks ENCSR608XTF ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB790JUW DNA False 2016-11-17 ENCODE 1 ENCFF160VXC, ENCFF521MJN, ENCFF834TUP 7254816 ENCODE Processing Pipeline 308d63dee50ea770d3a9870c122a6492 https://www.encodeproject.org/files/ENCFF059LBQ/@@download/ENCFF059LBQ.bed.gz hg19 released borderline replicate concordance, inconsistent platforms, mild to moderate bottlenecking ENCFF789DUE bed narrowPeak peaks ENCSR608XTF ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB790JUW DNA False 2016-11-17 ENCODE 2 ENCFF719JNQ, ENCFF834TUP 7334096 ENCODE Processing Pipeline dc8ca93624ffa5580dd9bdb280637134 https://www.encodeproject.org/files/ENCFF789DUE/@@download/ENCFF789DUE.bed.gz hg19 released borderline replicate concordance, inconsistent platforms, mild to moderate bottlenecking ENCFF512CYZ bigBed narrowPeak peaks ENCSR608XTF ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB790JUW DNA False 2016-11-17 ENCODE 1, 2 ENCFF134OWN 12818817 ENCODE Processing Pipeline 4abc5eca92e2015495a84389fb15203f https://www.encodeproject.org/files/ENCFF512CYZ/@@download/ENCFF512CYZ.bigBed hg19 released borderline replicate concordance, inconsistent platforms, mild to moderate bottlenecking ENCFF227XXB bigBed narrowPeak conservative idr thresholded peaks ENCSR608XTF ChIP-seq EFO:0002067 K562 cell line Homo sapiens RNF2-human ENCAB790JUW DNA False 2016-11-17 ENCODE 1, 2 ENCFF321RTR 206242 ENCODE Processing Pipeline 4a4af62a0d33ce75d7cc87704560723f https://www.encodeproject.org/files/ENCFF227XXB/@@download/ENCFF227XXB.bigBed hg19 released borderline replicate concordance, inconsistent platforms, mild to moderate bottlenecking ENCFF996EOY fastq reads ENCSR423FCW ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM14-human ENCAB047USE DNA SDS formaldehyde False 2018-01-22 ENCODE 2 1 40 single-ended 437528904 Xiang-Dong Fu, UCSD 082b2926feefbcc02758751539ef7bd5 https://www.encodeproject.org/files/ENCFF996EOY/@@download/ENCFF996EOY.fastq.gz Illumina HiSeq 2000 /files/ENCFF113ZAT/ released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity experiment not submitted to GEO insufficient read depth missing control alignments ENCFF320DMB fastq reads ENCSR423FCW ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM14-human ENCAB047USE DNA SDS formaldehyde False 2018-01-22 ENCODE 1 1 40 single-ended 598557611 Xiang-Dong Fu, UCSD 98cc80a72a00c548de7165bee9570e4d https://www.encodeproject.org/files/ENCFF320DMB/@@download/ENCFF320DMB.fastq.gz Illumina HiSeq 2000 /files/ENCFF911KYO/ released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity experiment not submitted to GEO insufficient read depth missing control alignments ENCFF594WOK bam alignments ENCSR423FCW ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM14-human ENCAB047USE DNA SDS formaldehyde False 2018-01-22 ENCODE 2 40 ENCFF807MUK, ENCFF996EOY 302639949 ENCODE Processing Pipeline e6890d78095efb500910db03bcda928f https://www.encodeproject.org/files/ENCFF594WOK/@@download/ENCFF594WOK.bam hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity experiment not submitted to GEO insufficient read depth missing control alignments ENCFF957SXO bam alignments ENCSR423FCW ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM14-human ENCAB047USE DNA SDS formaldehyde False 2018-01-22 ENCODE 1 40 ENCFF320DMB, ENCFF807MUK 383945707 ENCODE Processing Pipeline 436735e18271c1f6bc2b928f9a11121d https://www.encodeproject.org/files/ENCFF957SXO/@@download/ENCFF957SXO.bam hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity experiment not submitted to GEO insufficient read depth missing control alignments ENCFF953XJD bigWig signal p-value ENCSR423FCW ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM14-human ENCAB047USE DNA SDS formaldehyde False 2018-01-22 ENCODE 2 ENCFF594WOK, ENCFF922JGL 410722565 ENCODE Processing Pipeline 39e4d0e91baeb65aa5c5884a033906f2 https://www.encodeproject.org/files/ENCFF953XJD/@@download/ENCFF953XJD.bigWig hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity experiment not submitted to GEO insufficient read depth missing control alignments ENCFF519IFN bigWig signal p-value ENCSR423FCW ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM14-human ENCAB047USE DNA SDS formaldehyde False 2018-01-22 ENCODE 1, 2 ENCFF594WOK, ENCFF851QFR, ENCFF922JGL, ENCFF957SXO 828175187 ENCODE Processing Pipeline c30d0c69cf5f429eb6cc8ddffe433e17 https://www.encodeproject.org/files/ENCFF519IFN/@@download/ENCFF519IFN.bigWig hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity experiment not submitted to GEO insufficient read depth missing control alignments ENCFF967OVS bigWig fold change over control ENCSR423FCW ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM14-human ENCAB047USE DNA SDS formaldehyde False 2018-01-22 ENCODE 2 ENCFF594WOK, ENCFF922JGL 227443002 ENCODE Processing Pipeline 480672b5db020163ecbec8f30a32a994 https://www.encodeproject.org/files/ENCFF967OVS/@@download/ENCFF967OVS.bigWig hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity experiment not submitted to GEO insufficient read depth missing control alignments ENCFF730DRK bed narrowPeak peaks ENCSR423FCW ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM14-human ENCAB047USE DNA SDS formaldehyde False 2018-01-22 ENCODE 2 ENCFF594WOK, ENCFF922JGL 4192638 ENCODE Processing Pipeline e486321389bad03272e7499f7d4b681c https://www.encodeproject.org/files/ENCFF730DRK/@@download/ENCFF730DRK.bed.gz hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity experiment not submitted to GEO insufficient read depth missing control alignments ENCFF871OPM bed narrowPeak peaks ENCSR423FCW ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM14-human ENCAB047USE DNA SDS formaldehyde False 2018-01-22 ENCODE 1, 2 ENCFF594WOK, ENCFF851QFR, ENCFF922JGL, ENCFF957SXO 6432704 ENCODE Processing Pipeline c74b62013206b23ed044cd7cc0a405ea https://www.encodeproject.org/files/ENCFF871OPM/@@download/ENCFF871OPM.bed.gz hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity experiment not submitted to GEO insufficient read depth missing control alignments ENCFF727HDV bigBed narrowPeak peaks ENCSR423FCW ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM14-human ENCAB047USE DNA SDS formaldehyde False 2018-01-22 ENCODE 1 ENCFF713DPH 13196773 ENCODE Processing Pipeline 5a68ae568adfd78e6bc25b99c944d5cc https://www.encodeproject.org/files/ENCFF727HDV/@@download/ENCFF727HDV.bigBed hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity experiment not submitted to GEO insufficient read depth missing control alignments ENCFF707TKH bigWig fold change over control ENCSR423FCW ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM14-human ENCAB047USE DNA SDS formaldehyde False 2018-01-22 ENCODE 1, 2 ENCFF594WOK, ENCFF851QFR, ENCFF922JGL, ENCFF957SXO 625552036 ENCODE Processing Pipeline 2133dbf53128c610957e3f3f63147522 https://www.encodeproject.org/files/ENCFF707TKH/@@download/ENCFF707TKH.bigWig hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity experiment not submitted to GEO insufficient read depth missing control alignments ENCFF713DPH bed narrowPeak peaks ENCSR423FCW ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM14-human ENCAB047USE DNA SDS formaldehyde False 2018-01-22 ENCODE 1 ENCFF851QFR, ENCFF957SXO 5377602 ENCODE Processing Pipeline b2aa8ae86ae6ab9b127a951cb49416f1 https://www.encodeproject.org/files/ENCFF713DPH/@@download/ENCFF713DPH.bed.gz hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity experiment not submitted to GEO insufficient read depth missing control alignments ENCFF903IYX bigBed narrowPeak peaks ENCSR423FCW ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM14-human ENCAB047USE DNA SDS formaldehyde False 2018-01-22 ENCODE 2 ENCFF730DRK 9314340 ENCODE Processing Pipeline 1d21e94d09bb156cd589f18d6b86c5ca https://www.encodeproject.org/files/ENCFF903IYX/@@download/ENCFF903IYX.bigBed hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity experiment not submitted to GEO insufficient read depth missing control alignments ENCFF427SNN bigBed narrowPeak peaks ENCSR423FCW ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM14-human ENCAB047USE DNA SDS formaldehyde False 2018-01-22 ENCODE 1, 2 ENCFF871OPM 13442396 ENCODE Processing Pipeline 171b8a04017ae4bd2028856d225d0922 https://www.encodeproject.org/files/ENCFF427SNN/@@download/ENCFF427SNN.bigBed hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity experiment not submitted to GEO insufficient read depth missing control alignments ENCFF909ZXH bigWig signal p-value ENCSR423FCW ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM14-human ENCAB047USE DNA SDS formaldehyde False 2018-01-22 ENCODE 1 ENCFF851QFR, ENCFF957SXO 417063637 ENCODE Processing Pipeline 12b3cb1166e5f9d8da3b0a97d45cc311 https://www.encodeproject.org/files/ENCFF909ZXH/@@download/ENCFF909ZXH.bigWig hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity experiment not submitted to GEO insufficient read depth missing control alignments ENCFF514RGZ bigWig fold change over control ENCSR423FCW ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM14-human ENCAB047USE DNA SDS formaldehyde False 2018-01-22 ENCODE 1 ENCFF851QFR, ENCFF957SXO 287362785 ENCODE Processing Pipeline 60a28359858836e5502b1f9befd38ada https://www.encodeproject.org/files/ENCFF514RGZ/@@download/ENCFF514RGZ.bigWig hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity experiment not submitted to GEO insufficient read depth missing control alignments ENCFF424RBB bam unfiltered alignments ENCSR423FCW ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM14-human ENCAB047USE DNA SDS formaldehyde False 2018-01-22 ENCODE 2 ENCFF643CGH, ENCFF996EOY 576758460 ENCODE Processing Pipeline c9f8ba717aa411074602be5e99810991 https://www.encodeproject.org/files/ENCFF424RBB/@@download/ENCFF424RBB.bam GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity experiment not submitted to GEO insufficient read depth missing control alignments ENCFF107QHN bam unfiltered alignments ENCSR423FCW ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM14-human ENCAB047USE DNA SDS formaldehyde False 2018-01-22 ENCODE 1 ENCFF320DMB, ENCFF643CGH 780585174 ENCODE Processing Pipeline a342d1ac03dcceec4dd04d81eeeb2fde https://www.encodeproject.org/files/ENCFF107QHN/@@download/ENCFF107QHN.bam GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity experiment not submitted to GEO insufficient read depth missing control alignments ENCFF383MXO bam alignments ENCSR423FCW ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM14-human ENCAB047USE DNA SDS formaldehyde False 2018-01-22 ENCODE 2 40 ENCFF643CGH, ENCFF996EOY 302221452 ENCODE Processing Pipeline 8b39ccaed445b516a60024ca8f81a7fe https://www.encodeproject.org/files/ENCFF383MXO/@@download/ENCFF383MXO.bam GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity experiment not submitted to GEO insufficient read depth missing control alignments ENCFF374UVV bam alignments ENCSR423FCW ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM14-human ENCAB047USE DNA SDS formaldehyde False 2018-01-22 ENCODE 1 40 ENCFF320DMB, ENCFF643CGH 383435474 ENCODE Processing Pipeline ead8555e582a32b9c5e83b58d22a3974 https://www.encodeproject.org/files/ENCFF374UVV/@@download/ENCFF374UVV.bam GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity experiment not submitted to GEO insufficient read depth missing control alignments ENCFF982SSS bed narrowPeak conservative idr thresholded peaks ENCSR423FCW ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM14-human ENCAB047USE DNA SDS formaldehyde False 2018-01-22 ENCODE 1, 2 ENCFF001TDO, ENCFF713DPH, ENCFF730DRK, ENCFF871OPM 37337 ENCODE Processing Pipeline eaef4c11c78b01929aaa0a219b4bd4d4 https://www.encodeproject.org/files/ENCFF982SSS/@@download/ENCFF982SSS.bed.gz hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity experiment not submitted to GEO insufficient read depth missing control alignments ENCFF207MZH bigBed narrowPeak conservative idr thresholded peaks ENCSR423FCW ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM14-human ENCAB047USE DNA SDS formaldehyde False 2018-01-22 ENCODE 1, 2 ENCFF982SSS 110015 ENCODE Processing Pipeline 6805ae1265bbf2ee2430126cb6d42244 https://www.encodeproject.org/files/ENCFF207MZH/@@download/ENCFF207MZH.bigBed hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity experiment not submitted to GEO insufficient read depth missing control alignments ENCFF117LLI bigBed narrowPeak optimal idr thresholded peaks ENCSR423FCW ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM14-human ENCAB047USE DNA SDS formaldehyde False 2018-01-22 ENCODE 1, 2 ENCFF682SIY 147485 ENCODE Processing Pipeline 1c1fa3191cb2c91ebd5d6f39510f8eb0 https://www.encodeproject.org/files/ENCFF117LLI/@@download/ENCFF117LLI.bigBed hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity experiment not submitted to GEO insufficient read depth missing control alignments ENCFF682SIY bed narrowPeak optimal idr thresholded peaks ENCSR423FCW ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM14-human ENCAB047USE DNA SDS formaldehyde False 2018-01-22 ENCODE 1, 2 ENCFF001TDO, ENCFF713DPH, ENCFF730DRK, ENCFF871OPM 47832 ENCODE Processing Pipeline 5152e507af06d10f533a3a84de25302f https://www.encodeproject.org/files/ENCFF682SIY/@@download/ENCFF682SIY.bed.gz hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity experiment not submitted to GEO insufficient read depth missing control alignments ENCFF339MGM bed narrowPeak peaks ENCSR423FCW ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM14-human ENCAB047USE DNA SDS formaldehyde False 2018-01-22 ENCODE 1 ENCFF374UVV 4735835 ENCODE Processing Pipeline c97c77d8aba2dfe4539f088a1aa8dba1 https://www.encodeproject.org/files/ENCFF339MGM/@@download/ENCFF339MGM.bed.gz GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity experiment not submitted to GEO insufficient read depth missing control alignments ENCFF395ZWB bed narrowPeak peaks ENCSR423FCW ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM14-human ENCAB047USE DNA SDS formaldehyde False 2018-01-22 ENCODE 1, 2 ENCFF374UVV, ENCFF383MXO 6213889 ENCODE Processing Pipeline 90fcf1c61514fe9ca65e5c75077a48e1 https://www.encodeproject.org/files/ENCFF395ZWB/@@download/ENCFF395ZWB.bed.gz GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity experiment not submitted to GEO insufficient read depth missing control alignments ENCFF765WAJ bigBed narrowPeak peaks ENCSR423FCW ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM14-human ENCAB047USE DNA SDS formaldehyde False 2018-01-22 ENCODE 1 ENCFF339MGM 10773108 ENCODE Processing Pipeline 7d4fd5dcbe554773647ef752a8895053 https://www.encodeproject.org/files/ENCFF765WAJ/@@download/ENCFF765WAJ.bigBed GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity experiment not submitted to GEO insufficient read depth missing control alignments ENCFF719ZHN bed narrowPeak conservative idr thresholded peaks ENCSR423FCW ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM14-human ENCAB047USE DNA SDS formaldehyde False 2018-01-22 ENCODE 1, 2 ENCFF122HCE, ENCFF339MGM, ENCFF395ZWB, ENCFF419RSJ 42167 ENCODE Processing Pipeline b78d84be52e6c06f802cbe09b49428e0 https://www.encodeproject.org/files/ENCFF719ZHN/@@download/ENCFF719ZHN.bed.gz GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity experiment not submitted to GEO insufficient read depth missing control alignments ENCFF345LZQ bigBed narrowPeak conservative idr thresholded peaks ENCSR423FCW ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM14-human ENCAB047USE DNA SDS formaldehyde False 2018-01-22 ENCODE 1, 2 ENCFF719ZHN 137692 ENCODE Processing Pipeline f948c8c9aa038ec2a991f618709ab5e7 https://www.encodeproject.org/files/ENCFF345LZQ/@@download/ENCFF345LZQ.bigBed GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity experiment not submitted to GEO insufficient read depth missing control alignments ENCFF320YOI bed narrowPeak optimal idr thresholded peaks ENCSR423FCW ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM14-human ENCAB047USE DNA SDS formaldehyde False 2018-01-22 ENCODE 1, 2 ENCFF122HCE, ENCFF339MGM, ENCFF395ZWB, ENCFF419RSJ 53620 ENCODE Processing Pipeline 78f6245614f181831b719cd7e3d52f0d https://www.encodeproject.org/files/ENCFF320YOI/@@download/ENCFF320YOI.bed.gz GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity experiment not submitted to GEO insufficient read depth missing control alignments ENCFF133DUX bigWig fold change over control ENCSR423FCW ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM14-human ENCAB047USE DNA SDS formaldehyde False 2018-01-22 ENCODE 1 ENCFF374UVV 291757587 ENCODE Processing Pipeline 0031cc50dcd6e4c12bc2d2170d273f47 https://www.encodeproject.org/files/ENCFF133DUX/@@download/ENCFF133DUX.bigWig GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity experiment not submitted to GEO insufficient read depth missing control alignments ENCFF351IAK bigWig signal p-value ENCSR423FCW ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM14-human ENCAB047USE DNA SDS formaldehyde False 2018-01-22 ENCODE 2 ENCFF383MXO 451526104 ENCODE Processing Pipeline 9f684468e89837bbfe9234cd0e974ad8 https://www.encodeproject.org/files/ENCFF351IAK/@@download/ENCFF351IAK.bigWig GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity experiment not submitted to GEO insufficient read depth missing control alignments ENCFF122HCE bed narrowPeak peaks ENCSR423FCW ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM14-human ENCAB047USE DNA SDS formaldehyde False 2018-01-22 ENCODE 2 ENCFF383MXO 3997838 ENCODE Processing Pipeline 50783f12a2e22a0bddf68484736cb805 https://www.encodeproject.org/files/ENCFF122HCE/@@download/ENCFF122HCE.bed.gz GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity experiment not submitted to GEO insufficient read depth missing control alignments ENCFF110MJO bigWig signal p-value ENCSR423FCW ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM14-human ENCAB047USE DNA SDS formaldehyde False 2018-01-22 ENCODE 1, 2 ENCFF374UVV, ENCFF383MXO 935180339 ENCODE Processing Pipeline b31bd343e77f05e2b3412a2034768593 https://www.encodeproject.org/files/ENCFF110MJO/@@download/ENCFF110MJO.bigWig GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity experiment not submitted to GEO insufficient read depth missing control alignments ENCFF892RWK bigWig fold change over control ENCSR423FCW ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM14-human ENCAB047USE DNA SDS formaldehyde False 2018-01-22 ENCODE 1, 2 ENCFF374UVV, ENCFF383MXO 626180702 ENCODE Processing Pipeline a9b8e8475302a55c0900c3b7d9f00576 https://www.encodeproject.org/files/ENCFF892RWK/@@download/ENCFF892RWK.bigWig GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity experiment not submitted to GEO insufficient read depth missing control alignments ENCFF418DIO bigBed narrowPeak peaks ENCSR423FCW ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM14-human ENCAB047USE DNA SDS formaldehyde False 2018-01-22 ENCODE 1, 2 ENCFF395ZWB 13453882 ENCODE Processing Pipeline c80ccc514466175c4fef8b83ef4cdf81 https://www.encodeproject.org/files/ENCFF418DIO/@@download/ENCFF418DIO.bigBed GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity experiment not submitted to GEO insufficient read depth missing control alignments ENCFF081RGA bigWig fold change over control ENCSR423FCW ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM14-human ENCAB047USE DNA SDS formaldehyde False 2018-01-22 ENCODE 2 ENCFF383MXO 223106739 ENCODE Processing Pipeline 8b62b5f091906937a6f7fa995fe94196 https://www.encodeproject.org/files/ENCFF081RGA/@@download/ENCFF081RGA.bigWig GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity experiment not submitted to GEO insufficient read depth missing control alignments ENCFF113VET bigBed narrowPeak peaks ENCSR423FCW ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM14-human ENCAB047USE DNA SDS formaldehyde False 2018-01-22 ENCODE 2 ENCFF122HCE 9137264 ENCODE Processing Pipeline 58417347d4de5c995403962388741b16 https://www.encodeproject.org/files/ENCFF113VET/@@download/ENCFF113VET.bigBed GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity experiment not submitted to GEO insufficient read depth missing control alignments ENCFF388WKQ bigWig signal p-value ENCSR423FCW ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM14-human ENCAB047USE DNA SDS formaldehyde False 2018-01-22 ENCODE 1 ENCFF374UVV 524425306 ENCODE Processing Pipeline 3200c7c49de37c34bdc6f9422e898bff https://www.encodeproject.org/files/ENCFF388WKQ/@@download/ENCFF388WKQ.bigWig GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity experiment not submitted to GEO insufficient read depth missing control alignments ENCFF591NWW bigBed narrowPeak optimal idr thresholded peaks ENCSR423FCW ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM14-human ENCAB047USE DNA SDS formaldehyde False 2018-01-22 ENCODE 1, 2 ENCFF320YOI 157278 ENCODE Processing Pipeline f0718c679d41e7b69a5c4d474ce00bae https://www.encodeproject.org/files/ENCFF591NWW/@@download/ENCFF591NWW.bigBed GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity experiment not submitted to GEO insufficient read depth missing control alignments ENCFF352IEY bam unfiltered alignments ENCSR423FCW ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM14-human ENCAB047USE DNA SDS formaldehyde False 2018-01-22 ENCODE 1 40 ENCFF320DMB, ENCFF807MUK 777196078 ENCODE Processing Pipeline c09633a9fb81da32a4edb771279b3cd5 https://www.encodeproject.org/files/ENCFF352IEY/@@download/ENCFF352IEY.bam hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity experiment not submitted to GEO insufficient read depth missing control alignments ENCFF082WQA bam unfiltered alignments ENCSR423FCW ChIP-seq EFO:0002067 K562 cell line Homo sapiens RBM14-human ENCAB047USE DNA SDS formaldehyde False 2018-01-22 ENCODE 2 40 ENCFF807MUK, ENCFF996EOY 574373792 ENCODE Processing Pipeline 2e5f7736d0439e79d0af45d6c3bf3999 https://www.encodeproject.org/files/ENCFF082WQA/@@download/ENCFF082WQA.bam hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity experiment not submitted to GEO insufficient read depth missing control alignments ENCFF000YRM bam alignments ENCSR000EGK ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute IRF1-human ENCAB000AHX DNA see document see document False 2012-05-14 ENCODE 1 1 522117187 Michael Snyder, Stanford 866418d71294be680b3ddb49bb0ffac2 https://www.encodeproject.org/files/ENCFF000YRM/@@download/ENCFF000YRM.bam hg19 archived borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample, missing derived_from control insufficient read depth ENCFF000YRP bigBed narrowPeak peaks ENCSR000EGK ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute IRF1-human ENCAB000AHX DNA see document see document False 2012-05-14 ENCODE ENCFF001VNM 1715981 Michael Snyder, Stanford cd9df685b5b22c5e9eadbca14834805a https://www.encodeproject.org/files/ENCFF000YRP/@@download/ENCFF000YRP.bigBed hg19 archived borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample control insufficient read depth ENCFF000YRQ fastq reads ENCSR000EGK ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute IRF1-human ENCAB000AHX DNA see document see document False 2012-05-14 ENCODE 1 1 36 single-ended 904462266 Michael Snyder, Stanford 46b7eb2ea90a1ee8ea4c269723628ecf https://www.encodeproject.org/files/ENCFF000YRQ/@@download/ENCFF000YRQ.fastq.gz Illumina Genome Analyzer /files/ENCFF000YPM/ released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample control insufficient read depth ENCFF000YRS fastq reads ENCSR000EGK ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute IRF1-human ENCAB000AHX DNA see document see document False 2012-05-14 ENCODE 2 1 36 single-ended 1175663400 Michael Snyder, Stanford a5ce30b602fc21a2a86e7c1846f5c6b9 https://www.encodeproject.org/files/ENCFF000YRS/@@download/ENCFF000YRS.fastq.gz Illumina Genome Analyzer /files/ENCFF000YPM/ released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample control insufficient read depth ENCFF000YRU bigWig signal ENCSR000EGK ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute IRF1-human ENCAB000AHX DNA see document see document False 2012-05-14 ENCODE 415171912 Michael Snyder, Stanford c03cc2553fcde30f28191c61a8e62a6a https://www.encodeproject.org/files/ENCFF000YRU/@@download/ENCFF000YRU.bigWig hg19 archived borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample, missing derived_from control insufficient read depth ENCFF000YRY bam alignments ENCSR000EGK ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute IRF1-human ENCAB000AHX DNA see document see document False 2012-05-14 ENCODE 2 1 655180961 Michael Snyder, Stanford fea10e7bc7bcc35d641904b4b8d7e0c6 https://www.encodeproject.org/files/ENCFF000YRY/@@download/ENCFF000YRY.bam hg19 archived borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample, missing derived_from control insufficient read depth ENCFF001VNM bed narrowPeak peaks ENCSR000EGK ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute IRF1-human ENCAB000AHX DNA see document see document False 2012-05-14 ENCODE 842930 Michael Snyder, Stanford 767c90a87cb34d7f74ae69fbd816cf74 https://www.encodeproject.org/files/ENCFF001VNM/@@download/ENCFF001VNM.bed.gz hg19 archived borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample, missing derived_from control insufficient read depth ENCFF002CWX bed narrowPeak optimal idr thresholded peaks ENCSR000EGK ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute IRF1-human ENCAB000AHX DNA see document see document False 2012-05-14 ENCODE 265788 ENCODE Consortium Analysis Working Group 24eba98c3ea79e788b5dc044958e6784 https://www.encodeproject.org/files/ENCFF002CWX/@@download/ENCFF002CWX.bed.gz hg19 archived borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample, missing derived_from control insufficient read depth ENCFF485PHI bigBed narrowPeak optimal idr thresholded peaks ENCSR000EGK ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute IRF1-human ENCAB000AHX DNA see document see document False 2012-05-14 ENCODE ENCFF002CWX 724611 ENCODE Consortium 73240f8ad46ed68d74aa4728d7ea1cfe https://www.encodeproject.org/files/ENCFF485PHI/@@download/ENCFF485PHI.bigBed hg19 archived borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample control insufficient read depth ENCFF298EEO bam unfiltered alignments ENCSR000EGK ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute IRF1-human ENCAB000AHX DNA see document see document False 2012-05-14 ENCODE 1 27 ENCFF000YRQ, ENCFF807MUK 907970574 ENCODE Processing Pipeline 011b438a578a906edee299fd4e658cb5 https://www.encodeproject.org/files/ENCFF298EEO/@@download/ENCFF298EEO.bam hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample control insufficient read depth ENCFF805KYR bam unfiltered alignments ENCSR000EGK ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute IRF1-human ENCAB000AHX DNA see document see document False 2012-05-14 ENCODE 2 27 ENCFF000YRS, ENCFF807MUK 1167118251 ENCODE Processing Pipeline 612757b3ac959857b1cd5bad813ddedc https://www.encodeproject.org/files/ENCFF805KYR/@@download/ENCFF805KYR.bam hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample control insufficient read depth ENCFF293UAO bam alignments ENCSR000EGK ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute IRF1-human ENCAB000AHX DNA see document see document False 2012-05-14 ENCODE 2 27 ENCFF000YRS, ENCFF807MUK 724423101 ENCODE Processing Pipeline 5259752700f489349571ea9b70b19c49 https://www.encodeproject.org/files/ENCFF293UAO/@@download/ENCFF293UAO.bam hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample control insufficient read depth ENCFF389FCP bam alignments ENCSR000EGK ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute IRF1-human ENCAB000AHX DNA see document see document False 2012-05-14 ENCODE 1 27 ENCFF000YRQ, ENCFF807MUK 564116556 ENCODE Processing Pipeline a74d920415de8ed0f2abe692b53052ea https://www.encodeproject.org/files/ENCFF389FCP/@@download/ENCFF389FCP.bam hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample control insufficient read depth ENCFF212TTP bigWig signal p-value ENCSR000EGK ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute IRF1-human ENCAB000AHX DNA see document see document False 2012-05-14 ENCODE 1 ENCFF287WTN, ENCFF389FCP 239576803 ENCODE Processing Pipeline 7978bd51c64e4ffe8fcdaa4520fd5f5c https://www.encodeproject.org/files/ENCFF212TTP/@@download/ENCFF212TTP.bigWig hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample control insufficient read depth ENCFF034HNS bigWig signal p-value ENCSR000EGK ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute IRF1-human ENCAB000AHX DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF287WTN, ENCFF293UAO, ENCFF389FCP 230206842 ENCODE Processing Pipeline 4aaf924abb7a3c1cbb77d13e0be7784c https://www.encodeproject.org/files/ENCFF034HNS/@@download/ENCFF034HNS.bigWig hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample control insufficient read depth ENCFF823QYP bigWig fold change over control ENCSR000EGK ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute IRF1-human ENCAB000AHX DNA see document see document False 2012-05-14 ENCODE 1 ENCFF287WTN, ENCFF389FCP 271094907 ENCODE Processing Pipeline 1d6950485d0e36e8e9fa08194fa7c46c https://www.encodeproject.org/files/ENCFF823QYP/@@download/ENCFF823QYP.bigWig hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample control insufficient read depth ENCFF176FVU bigBed narrowPeak optimal idr thresholded peaks ENCSR000EGK ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute IRF1-human ENCAB000AHX DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF908UIY 549593 ENCODE Processing Pipeline 365ec18a60cae17ceeeab2aa3047fb8c https://www.encodeproject.org/files/ENCFF176FVU/@@download/ENCFF176FVU.bigBed hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample control insufficient read depth ENCFF846FXF bed narrowPeak peaks ENCSR000EGK ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute IRF1-human ENCAB000AHX DNA see document see document False 2012-05-14 ENCODE 2 ENCFF287WTN, ENCFF293UAO 4677267 ENCODE Processing Pipeline 5d04eabf7d801827ba9dd428b67b3a2a https://www.encodeproject.org/files/ENCFF846FXF/@@download/ENCFF846FXF.bed.gz hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample control insufficient read depth ENCFF443ROL bigBed narrowPeak peaks ENCSR000EGK ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute IRF1-human ENCAB000AHX DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF370WUU 13048145 ENCODE Processing Pipeline ab06d3f8ea6a7990e8d95b7b11087e49 https://www.encodeproject.org/files/ENCFF443ROL/@@download/ENCFF443ROL.bigBed hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample control insufficient read depth ENCFF868PUQ bigWig signal p-value ENCSR000EGK ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute IRF1-human ENCAB000AHX DNA see document see document False 2012-05-14 ENCODE 2 ENCFF287WTN, ENCFF293UAO 221414253 ENCODE Processing Pipeline 8f1d8a710c6d38c3464b423e61f645d8 https://www.encodeproject.org/files/ENCFF868PUQ/@@download/ENCFF868PUQ.bigWig hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample control insufficient read depth ENCFF390PTY bed narrowPeak peaks ENCSR000EGK ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute IRF1-human ENCAB000AHX DNA see document see document False 2012-05-14 ENCODE 1 ENCFF287WTN, ENCFF389FCP 4432438 ENCODE Processing Pipeline ab2e3391da9694f3f4d7e4e25f9d67bf https://www.encodeproject.org/files/ENCFF390PTY/@@download/ENCFF390PTY.bed.gz hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample control insufficient read depth ENCFF838DLS bigBed narrowPeak peaks ENCSR000EGK ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute IRF1-human ENCAB000AHX DNA see document see document False 2012-05-14 ENCODE 1 ENCFF390PTY 10217929 ENCODE Processing Pipeline 58cac70449050b373ceed12237a7aa87 https://www.encodeproject.org/files/ENCFF838DLS/@@download/ENCFF838DLS.bigBed hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample control insufficient read depth ENCFF908UIY bed narrowPeak optimal idr thresholded peaks ENCSR000EGK ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute IRF1-human ENCAB000AHX DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF001TDO, ENCFF370WUU, ENCFF390PTY, ENCFF846FXF 245198 ENCODE Processing Pipeline ec29245560e4baf22e4e5e93fac1d297 https://www.encodeproject.org/files/ENCFF908UIY/@@download/ENCFF908UIY.bed.gz hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample control insufficient read depth ENCFF832WQM bigWig fold change over control ENCSR000EGK ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute IRF1-human ENCAB000AHX DNA see document see document False 2012-05-14 ENCODE 2 ENCFF287WTN, ENCFF293UAO 333685968 ENCODE Processing Pipeline 2bd006cc3b2550f5108b0e0b2206a372 https://www.encodeproject.org/files/ENCFF832WQM/@@download/ENCFF832WQM.bigWig hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample control insufficient read depth ENCFF643JYP bigWig fold change over control ENCSR000EGK ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute IRF1-human ENCAB000AHX DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF287WTN, ENCFF293UAO, ENCFF389FCP 528276884 ENCODE Processing Pipeline c4cebd0f45aed4b2770f722e3c1fcb0a https://www.encodeproject.org/files/ENCFF643JYP/@@download/ENCFF643JYP.bigWig hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample control insufficient read depth ENCFF370WUU bed narrowPeak peaks ENCSR000EGK ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute IRF1-human ENCAB000AHX DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF287WTN, ENCFF293UAO, ENCFF389FCP 5360627 ENCODE Processing Pipeline cccf95223313c722121027af3403818d https://www.encodeproject.org/files/ENCFF370WUU/@@download/ENCFF370WUU.bed.gz hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample control insufficient read depth ENCFF007BVZ bigBed narrowPeak peaks ENCSR000EGK ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute IRF1-human ENCAB000AHX DNA see document see document False 2012-05-14 ENCODE 2 ENCFF846FXF 10488966 ENCODE Processing Pipeline 2c369d87bc389f829d69342a532bfa3f https://www.encodeproject.org/files/ENCFF007BVZ/@@download/ENCFF007BVZ.bigBed hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample control insufficient read depth ENCFF014UWV bam unfiltered alignments ENCSR000EGK ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute IRF1-human ENCAB000AHX DNA see document see document False 2012-05-14 ENCODE 1 27 ENCFF000YRQ, ENCFF643CGH 911342182 ENCODE Processing Pipeline 419acb98fbbeb50e074879f55ecfa0c3 https://www.encodeproject.org/files/ENCFF014UWV/@@download/ENCFF014UWV.bam GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample control insufficient read depth ENCFF597ADZ bigWig signal p-value ENCSR000EGK ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute IRF1-human ENCAB000AHX DNA see document see document False 2012-05-14 ENCODE 1 ENCFF168KTM, ENCFF942FFX 238259185 ENCODE Processing Pipeline c953587630426b79a195b4178c3de30a https://www.encodeproject.org/files/ENCFF597ADZ/@@download/ENCFF597ADZ.bigWig GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample control insufficient read depth ENCFF168KTM bam alignments ENCSR000EGK ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute IRF1-human ENCAB000AHX DNA see document see document False 2012-05-14 ENCODE 1 27 ENCFF000YRQ, ENCFF643CGH 563390708 ENCODE Processing Pipeline a302eab38c73bb9dbb5daf4c6ae64c72 https://www.encodeproject.org/files/ENCFF168KTM/@@download/ENCFF168KTM.bam GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample control insufficient read depth ENCFF159CFB bigWig fold change over control ENCSR000EGK ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute IRF1-human ENCAB000AHX DNA see document see document False 2012-05-14 ENCODE 1 ENCFF168KTM, ENCFF942FFX 268866008 ENCODE Processing Pipeline c97e1f062a2d561bb0b4e290ce282004 https://www.encodeproject.org/files/ENCFF159CFB/@@download/ENCFF159CFB.bigWig GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample control insufficient read depth ENCFF036DJU bigBed narrowPeak peaks ENCSR000EGK ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute IRF1-human ENCAB000AHX DNA see document see document False 2012-05-14 ENCODE 2 ENCFF023PTJ 10440423 ENCODE Processing Pipeline 061739f6aa93435b7edd3d4af58df651 https://www.encodeproject.org/files/ENCFF036DJU/@@download/ENCFF036DJU.bigBed GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample control insufficient read depth ENCFF642KEX bam unfiltered alignments ENCSR000EGK ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute IRF1-human ENCAB000AHX DNA see document see document False 2012-05-14 ENCODE 2 27 ENCFF000YRS, ENCFF643CGH 1171461567 ENCODE Processing Pipeline e694c479cd385cd6f672b0d34e08f4d0 https://www.encodeproject.org/files/ENCFF642KEX/@@download/ENCFF642KEX.bam GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample control insufficient read depth ENCFF299HHL bam alignments ENCSR000EGK ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute IRF1-human ENCAB000AHX DNA see document see document False 2012-05-14 ENCODE 2 27 ENCFF000YRS, ENCFF643CGH 723534974 ENCODE Processing Pipeline 094f08d2915b9d4db76919a59ba37e32 https://www.encodeproject.org/files/ENCFF299HHL/@@download/ENCFF299HHL.bam GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample control insufficient read depth ENCFF079GUB bigWig signal p-value ENCSR000EGK ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute IRF1-human ENCAB000AHX DNA see document see document False 2012-05-14 ENCODE 2 ENCFF299HHL, ENCFF942FFX 223033943 ENCODE Processing Pipeline ae429fa1569129fc68c78cf821f50d70 https://www.encodeproject.org/files/ENCFF079GUB/@@download/ENCFF079GUB.bigWig GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample control insufficient read depth ENCFF509UDO bigWig signal p-value ENCSR000EGK ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute IRF1-human ENCAB000AHX DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF168KTM, ENCFF299HHL, ENCFF942FFX 231225736 ENCODE Processing Pipeline 3674a5cc965e75c262b5ae37611a5fa6 https://www.encodeproject.org/files/ENCFF509UDO/@@download/ENCFF509UDO.bigWig GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample control insufficient read depth ENCFF177XGS bigWig fold change over control ENCSR000EGK ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute IRF1-human ENCAB000AHX DNA see document see document False 2012-05-14 ENCODE 2 ENCFF299HHL, ENCFF942FFX 330802733 ENCODE Processing Pipeline 02e3b01603f2690111f3bc2bf0ed505c https://www.encodeproject.org/files/ENCFF177XGS/@@download/ENCFF177XGS.bigWig GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample control insufficient read depth ENCFF023PTJ bed narrowPeak peaks ENCSR000EGK ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute IRF1-human ENCAB000AHX DNA see document see document False 2012-05-14 ENCODE 2 ENCFF299HHL, ENCFF942FFX 4616294 ENCODE Processing Pipeline b5dc212377600b36c85344eddbae0ae6 https://www.encodeproject.org/files/ENCFF023PTJ/@@download/ENCFF023PTJ.bed.gz GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample control insufficient read depth ENCFF093VAP bigWig fold change over control ENCSR000EGK ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute IRF1-human ENCAB000AHX DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF168KTM, ENCFF299HHL, ENCFF942FFX 524491889 ENCODE Processing Pipeline f63c0d46ff4aa4ee73a0a8b3c8398822 https://www.encodeproject.org/files/ENCFF093VAP/@@download/ENCFF093VAP.bigWig GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample control insufficient read depth ENCFF642JPJ bed narrowPeak peaks ENCSR000EGK ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute IRF1-human ENCAB000AHX DNA see document see document False 2012-05-14 ENCODE 1 ENCFF168KTM, ENCFF942FFX 4442680 ENCODE Processing Pipeline 1c076edd67df6208a4e7f62fc963be72 https://www.encodeproject.org/files/ENCFF642JPJ/@@download/ENCFF642JPJ.bed.gz GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample control insufficient read depth ENCFF688XON bed narrowPeak optimal idr thresholded peaks ENCSR000EGK ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute IRF1-human ENCAB000AHX DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF023PTJ, ENCFF314LWQ, ENCFF419RSJ, ENCFF642JPJ 246488 ENCODE Processing Pipeline da91f0a6bf4dc7319b2c220c94ea6655 https://www.encodeproject.org/files/ENCFF688XON/@@download/ENCFF688XON.bed.gz GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample control insufficient read depth ENCFF314LWQ bed narrowPeak peaks ENCSR000EGK ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute IRF1-human ENCAB000AHX DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF168KTM, ENCFF299HHL, ENCFF942FFX 5288698 ENCODE Processing Pipeline 93b6b2c7350ba9dc135184b4b9f9c7a6 https://www.encodeproject.org/files/ENCFF314LWQ/@@download/ENCFF314LWQ.bed.gz GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample control insufficient read depth ENCFF819WZL bigBed narrowPeak peaks ENCSR000EGK ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute IRF1-human ENCAB000AHX DNA see document see document False 2012-05-14 ENCODE 1 ENCFF642JPJ 10289881 ENCODE Processing Pipeline b3e3c3b652aca5522652d4455f07888b https://www.encodeproject.org/files/ENCFF819WZL/@@download/ENCFF819WZL.bigBed GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample control insufficient read depth ENCFF796KSA bigBed narrowPeak peaks ENCSR000EGK ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute IRF1-human ENCAB000AHX DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF314LWQ 13038790 ENCODE Processing Pipeline 4787bef007335de7a59a965de70ab085 https://www.encodeproject.org/files/ENCFF796KSA/@@download/ENCFF796KSA.bigBed GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample control insufficient read depth ENCFF757DKM bigBed narrowPeak optimal idr thresholded peaks ENCSR000EGK ChIP-seq EFO:0002067 K562 cell line Homo sapiens interferon gamma 30.0 minute IRF1-human ENCAB000AHX DNA see document see document False 2012-05-14 ENCODE 1, 2 ENCFF688XON 461167 ENCODE Processing Pipeline 334b3fbe895a8d6c967e294f5b358b36 https://www.encodeproject.org/files/ENCFF757DKM/@@download/ENCFF757DKM.bigBed GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length biological replicates with identical biosample control insufficient read depth ENCFF000YNP bam alignments ENCSR000DOE ChIP-seq EFO:0002067 K562 cell line Homo sapiens GTF2B-human ENCAB000AHD DNA see document see document False 2011-10-29 ENCODE 1 ENCFF000YNX 153584597 Kevin Struhl, HMS e511533be270d8ef3b3c1d13f472f159 https://www.encodeproject.org/files/ENCFF000YNP/@@download/ENCFF000YNP.bam hg19 released biological replicates with identical biosample insufficient read length extremely low read depth ENCFF000YNQ bigBed narrowPeak peaks ENCSR000DOE ChIP-seq EFO:0002067 K562 cell line Homo sapiens GTF2B-human ENCAB000AHD DNA see document see document False 2011-10-29 ENCODE ENCFF001VNF 535159 Kevin Struhl, HMS de18359a921c502297acd1d56dff35c5 https://www.encodeproject.org/files/ENCFF000YNQ/@@download/ENCFF000YNQ.bigBed hg19 released biological replicates with identical biosample insufficient read length extremely low read depth ENCFF000YNR bam alignments ENCSR000DOE ChIP-seq EFO:0002067 K562 cell line Homo sapiens GTF2B-human ENCAB000AHD DNA see document see document False 2011-10-29 ENCODE 2 ENCFF000YNW 187964677 Kevin Struhl, HMS 358e41ae85a28f50e9e0566d1e05356a https://www.encodeproject.org/files/ENCFF000YNR/@@download/ENCFF000YNR.bam hg19 released biological replicates with identical biosample insufficient read length extremely low read depth ENCFF000YNS bigWig signal ENCSR000DOE ChIP-seq EFO:0002067 K562 cell line Homo sapiens GTF2B-human ENCAB000AHD DNA see document see document False 2011-10-29 ENCODE 297169573 Kevin Struhl, HMS c4878c1be76226c38d5ded140a60ee4d https://www.encodeproject.org/files/ENCFF000YNS/@@download/ENCFF000YNS.bigWig hg19 released biological replicates with identical biosample, missing derived_from insufficient read length extremely low read depth ENCFF000YNW fastq reads ENCSR000DOE ChIP-seq EFO:0002067 K562 cell line Homo sapiens GTF2B-human ENCAB000AHD DNA see document see document False 2011-10-29 ENCODE 2 1 34 single-ended 283342699 Kevin Struhl, HMS 0ad5016ba72cc2a804ba495f6c09ad19 https://www.encodeproject.org/files/ENCFF000YNW/@@download/ENCFF000YNW.fastq.gz Illumina Genome Analyzer /files/ENCFF000YRC/ released inconsistent control read length biological replicates with identical biosample insufficient read length extremely low read depth ENCFF000YNX fastq reads ENCSR000DOE ChIP-seq EFO:0002067 K562 cell line Homo sapiens GTF2B-human ENCAB000AHD DNA see document see document False 2011-10-29 ENCODE 1 1 34 single-ended 355953125 Kevin Struhl, HMS 9e0ae9bd653ad1774243ddc50251000e https://www.encodeproject.org/files/ENCFF000YNX/@@download/ENCFF000YNX.fastq.gz Illumina Genome Analyzer /files/ENCFF000YRN/ released inconsistent control read length biological replicates with identical biosample insufficient read length extremely low read depth ENCFF001VNF bed narrowPeak peaks ENCSR000DOE ChIP-seq EFO:0002067 K562 cell line Homo sapiens GTF2B-human ENCAB000AHD DNA see document see document False 2011-10-29 ENCODE 194296 Kevin Struhl, HMS 30cdabd6bbf43b482c8459b675f20ebe https://www.encodeproject.org/files/ENCFF001VNF/@@download/ENCFF001VNF.bed.gz hg19 released biological replicates with identical biosample, missing derived_from insufficient read length extremely low read depth ENCFF002CWR bed narrowPeak optimal idr thresholded peaks ENCSR000DOE ChIP-seq EFO:0002067 K562 cell line Homo sapiens GTF2B-human ENCAB000AHD DNA see document see document False 2011-10-29 ENCODE 72817 ENCODE Consortium Analysis Working Group 75b9839093fea57946dadfdef9ed7efd https://www.encodeproject.org/files/ENCFF002CWR/@@download/ENCFF002CWR.bed.gz hg19 released biological replicates with identical biosample, missing derived_from insufficient read length extremely low read depth ENCFF827MSM bigBed narrowPeak optimal idr thresholded peaks ENCSR000DOE ChIP-seq EFO:0002067 K562 cell line Homo sapiens GTF2B-human ENCAB000AHD DNA see document see document False 2011-10-29 ENCODE ENCFF002CWR 226175 ENCODE Consortium f437454b030bd5d9aaca1eb7e6f50663 https://www.encodeproject.org/files/ENCFF827MSM/@@download/ENCFF827MSM.bigBed hg19 released biological replicates with identical biosample insufficient read length extremely low read depth ENCFF735TSS bam alignments ENCSR000DOE ChIP-seq EFO:0002067 K562 cell line Homo sapiens GTF2B-human ENCAB000AHD DNA see document see document False 2011-10-29 ENCODE 1 27 ENCFF000YNX, ENCFF643CGH 157763907 ENCODE Processing Pipeline c65ad06543c09ea19930592651100585 https://www.encodeproject.org/files/ENCFF735TSS/@@download/ENCFF735TSS.bam GRCh38 released biological replicates with identical biosample insufficient read length extremely low read depth ENCFF491JGC bam alignments ENCSR000DOE ChIP-seq EFO:0002067 K562 cell line Homo sapiens GTF2B-human ENCAB000AHD DNA see document see document False 2011-10-29 ENCODE 2 27 ENCFF000YNW, ENCFF643CGH 196426429 ENCODE Processing Pipeline c75c58f4384dc4d5def835ca47a9c186 https://www.encodeproject.org/files/ENCFF491JGC/@@download/ENCFF491JGC.bam GRCh38 released biological replicates with identical biosample insufficient read length extremely low read depth ENCFF213KWS bam unfiltered alignments ENCSR000DOE ChIP-seq EFO:0002067 K562 cell line Homo sapiens GTF2B-human ENCAB000AHD DNA see document see document False 2011-10-29 ENCODE 2 27 ENCFF000YNW, ENCFF643CGH 311980272 ENCODE Processing Pipeline c6a0897593a003d025d4652e694c931c https://www.encodeproject.org/files/ENCFF213KWS/@@download/ENCFF213KWS.bam GRCh38 released biological replicates with identical biosample insufficient read length extremely low read depth ENCFF484MGT bam unfiltered alignments ENCSR000DOE ChIP-seq EFO:0002067 K562 cell line Homo sapiens GTF2B-human ENCAB000AHD DNA see document see document False 2011-10-29 ENCODE 1 27 ENCFF000YNX, ENCFF643CGH 342629684 ENCODE Processing Pipeline 0575073628d109fc39c0de3603a12476 https://www.encodeproject.org/files/ENCFF484MGT/@@download/ENCFF484MGT.bam GRCh38 released biological replicates with identical biosample insufficient read length extremely low read depth ENCFF767GEX bed narrowPeak peaks ENCSR000DOE ChIP-seq EFO:0002067 K562 cell line Homo sapiens GTF2B-human ENCAB000AHD DNA see document see document False 2011-10-29 ENCODE 1 ENCFF123YHB, ENCFF332BFE, ENCFF735TSS 855381 ENCODE Processing Pipeline 70c2c616802c0f35cdd61263f0fa3cdd https://www.encodeproject.org/files/ENCFF767GEX/@@download/ENCFF767GEX.bed.gz GRCh38 released biological replicates with identical biosample insufficient read length extremely low read depth ENCFF218IGO bed narrowPeak peaks ENCSR000DOE ChIP-seq EFO:0002067 K562 cell line Homo sapiens GTF2B-human ENCAB000AHD DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF123YHB, ENCFF332BFE, ENCFF491JGC, ENCFF735TSS 3274601 ENCODE Processing Pipeline d082f109202dcb20ce851e294d6c6948 https://www.encodeproject.org/files/ENCFF218IGO/@@download/ENCFF218IGO.bed.gz GRCh38 released biological replicates with identical biosample insufficient read length extremely low read depth ENCFF806MWQ bigBed narrowPeak peaks ENCSR000DOE ChIP-seq EFO:0002067 K562 cell line Homo sapiens GTF2B-human ENCAB000AHD DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF218IGO 7952606 ENCODE Processing Pipeline ff4747ca37c9a667cd62e3bf861fbbc5 https://www.encodeproject.org/files/ENCFF806MWQ/@@download/ENCFF806MWQ.bigBed GRCh38 released biological replicates with identical biosample insufficient read length extremely low read depth ENCFF261NLZ bigBed narrowPeak peaks ENCSR000DOE ChIP-seq EFO:0002067 K562 cell line Homo sapiens GTF2B-human ENCAB000AHD DNA see document see document False 2011-10-29 ENCODE 1 ENCFF767GEX 1995741 ENCODE Processing Pipeline 7a3d7c9de9c4cc63709f79360f177af9 https://www.encodeproject.org/files/ENCFF261NLZ/@@download/ENCFF261NLZ.bigBed GRCh38 released biological replicates with identical biosample insufficient read length extremely low read depth ENCFF970ULG bed narrowPeak optimal idr thresholded peaks ENCSR000DOE ChIP-seq EFO:0002067 K562 cell line Homo sapiens GTF2B-human ENCAB000AHD DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF218IGO, ENCFF419RSJ, ENCFF767DHX, ENCFF767GEX 36995 ENCODE Processing Pipeline 4bc6e138727894bdc9d3e9fc571c3222 https://www.encodeproject.org/files/ENCFF970ULG/@@download/ENCFF970ULG.bed.gz GRCh38 released biological replicates with identical biosample insufficient read length extremely low read depth ENCFF211EGL bigWig fold change over control ENCSR000DOE ChIP-seq EFO:0002067 K562 cell line Homo sapiens GTF2B-human ENCAB000AHD DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF123YHB, ENCFF332BFE, ENCFF491JGC, ENCFF735TSS 206607976 ENCODE Processing Pipeline 5122ae27136efffa4b731cee84236fa9 https://www.encodeproject.org/files/ENCFF211EGL/@@download/ENCFF211EGL.bigWig GRCh38 released biological replicates with identical biosample insufficient read length extremely low read depth ENCFF369WLU bigBed narrowPeak peaks ENCSR000DOE ChIP-seq EFO:0002067 K562 cell line Homo sapiens GTF2B-human ENCAB000AHD DNA see document see document False 2011-10-29 ENCODE 2 ENCFF767DHX 3268966 ENCODE Processing Pipeline 98ab3f3f5f7a1bd5f4225a5a7188c10a https://www.encodeproject.org/files/ENCFF369WLU/@@download/ENCFF369WLU.bigBed GRCh38 released biological replicates with identical biosample insufficient read length extremely low read depth ENCFF731KVK bigBed narrowPeak optimal idr thresholded peaks ENCSR000DOE ChIP-seq EFO:0002067 K562 cell line Homo sapiens GTF2B-human ENCAB000AHD DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF970ULG 118857 ENCODE Processing Pipeline 0066fef7e30110b98767bb46fb94fa09 https://www.encodeproject.org/files/ENCFF731KVK/@@download/ENCFF731KVK.bigBed GRCh38 released biological replicates with identical biosample insufficient read length extremely low read depth ENCFF655ZMK bigWig signal p-value ENCSR000DOE ChIP-seq EFO:0002067 K562 cell line Homo sapiens GTF2B-human ENCAB000AHD DNA see document see document False 2011-10-29 ENCODE 2 ENCFF123YHB, ENCFF332BFE, ENCFF491JGC 317790453 ENCODE Processing Pipeline 556c67540504117b73ea0f5a28889085 https://www.encodeproject.org/files/ENCFF655ZMK/@@download/ENCFF655ZMK.bigWig GRCh38 released biological replicates with identical biosample insufficient read length extremely low read depth ENCFF175JKD bigWig signal p-value ENCSR000DOE ChIP-seq EFO:0002067 K562 cell line Homo sapiens GTF2B-human ENCAB000AHD DNA see document see document False 2011-10-29 ENCODE 1 ENCFF123YHB, ENCFF332BFE, ENCFF735TSS 350097919 ENCODE Processing Pipeline 419c0529de8268abb47564eddc4b1bd0 https://www.encodeproject.org/files/ENCFF175JKD/@@download/ENCFF175JKD.bigWig GRCh38 released biological replicates with identical biosample insufficient read length extremely low read depth ENCFF925DTL bigWig fold change over control ENCSR000DOE ChIP-seq EFO:0002067 K562 cell line Homo sapiens GTF2B-human ENCAB000AHD DNA see document see document False 2011-10-29 ENCODE 1 ENCFF123YHB, ENCFF332BFE, ENCFF735TSS 98671712 ENCODE Processing Pipeline c424184f041b75575a9d095e1dc50f8e https://www.encodeproject.org/files/ENCFF925DTL/@@download/ENCFF925DTL.bigWig GRCh38 released biological replicates with identical biosample insufficient read length extremely low read depth ENCFF288YXL bigWig signal p-value ENCSR000DOE ChIP-seq EFO:0002067 K562 cell line Homo sapiens GTF2B-human ENCAB000AHD DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF123YHB, ENCFF332BFE, ENCFF491JGC, ENCFF735TSS 382063145 ENCODE Processing Pipeline d2752d68122b98e6e86828c7806242d5 https://www.encodeproject.org/files/ENCFF288YXL/@@download/ENCFF288YXL.bigWig GRCh38 released biological replicates with identical biosample insufficient read length extremely low read depth ENCFF180ZTX bigWig fold change over control ENCSR000DOE ChIP-seq EFO:0002067 K562 cell line Homo sapiens GTF2B-human ENCAB000AHD DNA see document see document False 2011-10-29 ENCODE 2 ENCFF123YHB, ENCFF332BFE, ENCFF491JGC 135811903 ENCODE Processing Pipeline 9af83abb91e7267cad033e2ba773545a https://www.encodeproject.org/files/ENCFF180ZTX/@@download/ENCFF180ZTX.bigWig GRCh38 released biological replicates with identical biosample insufficient read length extremely low read depth ENCFF767DHX bed narrowPeak peaks ENCSR000DOE ChIP-seq EFO:0002067 K562 cell line Homo sapiens GTF2B-human ENCAB000AHD DNA see document see document False 2011-10-29 ENCODE 2 ENCFF123YHB, ENCFF332BFE, ENCFF491JGC 1569474 ENCODE Processing Pipeline 8d5abc785e969d797b1efec7b78e35c3 https://www.encodeproject.org/files/ENCFF767DHX/@@download/ENCFF767DHX.bed.gz GRCh38 released biological replicates with identical biosample insufficient read length extremely low read depth ENCFF000YYM bam alignments ENCSR000DOI ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR3A-human ENCAB000AKL DNA see document see document False 2011-10-29 ENCODE 1 ENCFF000YYV 356461519 Kevin Struhl, HMS 301cc708041b6fee15716493045c9573 https://www.encodeproject.org/files/ENCFF000YYM/@@download/ENCFF000YYM.bam hg19 released biological replicates with identical biosample insufficient read length ENCFF000YYN bam alignments ENCSR000DOI ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR3A-human ENCAB000AKL DNA see document see document False 2011-10-29 ENCODE 2 ENCFF000YYW 380143046 Kevin Struhl, HMS 563c84370e36c6055c3001cc55d208cb https://www.encodeproject.org/files/ENCFF000YYN/@@download/ENCFF000YYN.bam hg19 released biological replicates with identical biosample insufficient read length ENCFF000YYO bigBed narrowPeak peaks ENCSR000DOI ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR3A-human ENCAB000AKL DNA see document see document False 2011-10-29 ENCODE ENCFF001VOO 125164 Kevin Struhl, HMS 11df752b476d3122711fb26487d8da81 https://www.encodeproject.org/files/ENCFF000YYO/@@download/ENCFF000YYO.bigBed hg19 released biological replicates with identical biosample insufficient read length ENCFF000YYP bigWig signal ENCSR000DOI ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR3A-human ENCAB000AKL DNA see document see document False 2011-10-29 ENCODE 296834302 Kevin Struhl, HMS fcba3b130a9c71fa995f0d2728c33b00 https://www.encodeproject.org/files/ENCFF000YYP/@@download/ENCFF000YYP.bigWig hg19 released biological replicates with identical biosample, missing derived_from insufficient read length ENCFF000YYV fastq reads ENCSR000DOI ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR3A-human ENCAB000AKL DNA see document see document False 2011-10-29 ENCODE 1 1 27 single-ended 293503943 Kevin Struhl, HMS 630fa527c58ea892f1fd61b0e660c3b3 https://www.encodeproject.org/files/ENCFF000YYV/@@download/ENCFF000YYV.fastq.gz Illumina Genome Analyzer /files/ENCFF000YRN/ released biological replicates with identical biosample insufficient read length ENCFF000YYW fastq reads ENCSR000DOI ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR3A-human ENCAB000AKL DNA see document see document False 2011-10-29 ENCODE 2 1 27 single-ended 294958761 Kevin Struhl, HMS e77e076ee9018830c98d0f932580de41 https://www.encodeproject.org/files/ENCFF000YYW/@@download/ENCFF000YYW.fastq.gz Illumina Genome Analyzer /files/ENCFF000YRC/ released biological replicates with identical biosample insufficient read length ENCFF001VOO bed narrowPeak peaks ENCSR000DOI ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR3A-human ENCAB000AKL DNA see document see document False 2011-10-29 ENCODE 19459 Kevin Struhl, HMS c5b18252c20c6aebc467656680c51d20 https://www.encodeproject.org/files/ENCFF001VOO/@@download/ENCFF001VOO.bed.gz hg19 released biological replicates with identical biosample, missing derived_from insufficient read length ENCFF002CXW bed narrowPeak optimal idr thresholded peaks ENCSR000DOI ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR3A-human ENCAB000AKL DNA see document see document False 2011-10-29 ENCODE 30224 ENCODE Consortium Analysis Working Group 9d13b60b0b83cf1043c1fa5e719e66a5 https://www.encodeproject.org/files/ENCFF002CXW/@@download/ENCFF002CXW.bed.gz hg19 released biological replicates with identical biosample, missing derived_from insufficient read length ENCFF596FCL bigBed narrowPeak optimal idr thresholded peaks ENCSR000DOI ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR3A-human ENCAB000AKL DNA see document see document False 2011-10-29 ENCODE ENCFF002CXW 150901 ENCODE Consortium bdf6f7c1752dbdda2ccb7064cf165e71 https://www.encodeproject.org/files/ENCFF596FCL/@@download/ENCFF596FCL.bigBed hg19 released biological replicates with identical biosample insufficient read length ENCFF000YGT bam alignments ENCSR000DOC ChIP-seq EFO:0002067 K562 cell line Homo sapiens BRF2-human ENCAB000AEN DNA see document see document False 2011-10-29 ENCODE 1 ENCFF000YHE 735915824 Kevin Struhl, HMS 2e9b80c6510ccecdd14165f1bc6f6f18 https://www.encodeproject.org/files/ENCFF000YGT/@@download/ENCFF000YGT.bam hg19 released biological replicates with identical biosample insufficient read length ENCFF000YGU bam alignments ENCSR000DOC ChIP-seq EFO:0002067 K562 cell line Homo sapiens BRF2-human ENCAB000AEN DNA see document see document False 2011-10-29 ENCODE 3 ENCFF000YHB 589270885 Kevin Struhl, HMS 8b4d8d2ce10540fdd564eea8f59d1665 https://www.encodeproject.org/files/ENCFF000YGU/@@download/ENCFF000YGU.bam hg19 released biological replicates with identical biosample insufficient read length ENCFF000YGV bam alignments ENCSR000DOC ChIP-seq EFO:0002067 K562 cell line Homo sapiens BRF2-human ENCAB000AEN DNA see document see document False 2011-10-29 ENCODE 2 ENCFF000YHD 742901263 Kevin Struhl, HMS f4abeba64a2d9886a8bf70d7678d432d https://www.encodeproject.org/files/ENCFF000YGV/@@download/ENCFF000YGV.bam hg19 released biological replicates with identical biosample insufficient read length ENCFF000YGW bigBed narrowPeak peaks ENCSR000DOC ChIP-seq EFO:0002067 K562 cell line Homo sapiens BRF2-human ENCAB000AEN DNA see document see document False 2011-10-29 ENCODE ENCFF001VMD 34762 Kevin Struhl, HMS de5f2c83706d934c4c5e695700ed86c1 https://www.encodeproject.org/files/ENCFF000YGW/@@download/ENCFF000YGW.bigBed hg19 released biological replicates with identical biosample insufficient read length ENCFF000YGX bigWig signal ENCSR000DOC ChIP-seq EFO:0002067 K562 cell line Homo sapiens BRF2-human ENCAB000AEN DNA see document see document False 2011-10-29 ENCODE 472485311 Kevin Struhl, HMS 68720131f6b20380b56e36eafed86c4f https://www.encodeproject.org/files/ENCFF000YGX/@@download/ENCFF000YGX.bigWig hg19 released biological replicates with identical biosample, missing derived_from insufficient read length ENCFF000YHB fastq reads ENCSR000DOC ChIP-seq EFO:0002067 K562 cell line Homo sapiens BRF2-human ENCAB000AEN DNA see document see document False 2011-10-29 ENCODE 3 1 27 single-ended 433238242 Kevin Struhl, HMS 45cce05875294332e177c31a1a5d0100 https://www.encodeproject.org/files/ENCFF000YHB/@@download/ENCFF000YHB.fastq.gz Illumina Genome Analyzer released biological replicates with identical biosample insufficient read length, missing controlled_by ENCFF000YHD fastq reads ENCSR000DOC ChIP-seq EFO:0002067 K562 cell line Homo sapiens BRF2-human ENCAB000AEN DNA see document see document False 2011-10-29 ENCODE 2 1 27 single-ended 548488536 Kevin Struhl, HMS 506b83ebc3758b93828deae47a954f09 https://www.encodeproject.org/files/ENCFF000YHD/@@download/ENCFF000YHD.fastq.gz Illumina Genome Analyzer released biological replicates with identical biosample insufficient read length, missing controlled_by ENCFF000YHE fastq reads ENCSR000DOC ChIP-seq EFO:0002067 K562 cell line Homo sapiens BRF2-human ENCAB000AEN DNA see document see document False 2011-10-29 ENCODE 1 1 27 single-ended 549121888 Kevin Struhl, HMS e73cba10b39583ddf532c96efc11cc88 https://www.encodeproject.org/files/ENCFF000YHE/@@download/ENCFF000YHE.fastq.gz Illumina Genome Analyzer released biological replicates with identical biosample insufficient read length, missing controlled_by ENCFF001VMD bed narrowPeak peaks ENCSR000DOC ChIP-seq EFO:0002067 K562 cell line Homo sapiens BRF2-human ENCAB000AEN DNA see document see document False 2011-10-29 ENCODE 664 Kevin Struhl, HMS 4932aa8b0f3f34a2c5fe3decb67eb76f https://www.encodeproject.org/files/ENCFF001VMD/@@download/ENCFF001VMD.bed.gz hg19 released biological replicates with identical biosample, missing derived_from insufficient read length ENCFF002CVS bed narrowPeak optimal idr thresholded peaks ENCSR000DOC ChIP-seq EFO:0002067 K562 cell line Homo sapiens BRF2-human ENCAB000AEN DNA see document see document False 2011-10-29 ENCODE 29151 ENCODE Consortium Analysis Working Group f075234fcb2722a9724e3854f969ff0b https://www.encodeproject.org/files/ENCFF002CVS/@@download/ENCFF002CVS.bed.gz hg19 released biological replicates with identical biosample, missing derived_from insufficient read length ENCFF228PQV bigBed narrowPeak optimal idr thresholded peaks ENCSR000DOC ChIP-seq EFO:0002067 K562 cell line Homo sapiens BRF2-human ENCAB000AEN DNA see document see document False 2011-10-29 ENCODE ENCFF002CVS 140599 ENCODE Consortium e94220533984514acc104fffced9753f https://www.encodeproject.org/files/ENCFF228PQV/@@download/ENCFF228PQV.bigBed hg19 released biological replicates with identical biosample insufficient read length ENCFF000ZEF bam alignments ENCSR000EWN ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF263-human ENCAB000AMT DNA see document see document False 2011-10-29 ENCODE 1 ENCFF000ZEX 305353587 Peggy Farnham, USC f5fdb8889067ede39d7016c89c34aeed https://www.encodeproject.org/files/ENCFF000ZEF/@@download/ENCFF000ZEF.bam hg19 archived biological replicates with identical biosample insufficient read length extremely low read depth ENCFF000ZEG bam alignments ENCSR000EWN ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF263-human ENCAB000AMT DNA see document see document False 2011-10-29 ENCODE 2 ENCFF000ZEY 305900513 Peggy Farnham, USC e836335b1c73bc73bdb58a6a2e942d91 https://www.encodeproject.org/files/ENCFF000ZEG/@@download/ENCFF000ZEG.bam hg19 archived biological replicates with identical biosample insufficient read length extremely low read depth ENCFF000ZEH bigBed narrowPeak peaks ENCSR000EWN ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF263-human ENCAB000AMT DNA see document see document False 2011-10-29 ENCODE ENCFF001VPM 171356 Peggy Farnham, USC 670554216744ef929dac781f9d033791 https://www.encodeproject.org/files/ENCFF000ZEH/@@download/ENCFF000ZEH.bigBed hg19 archived biological replicates with identical biosample insufficient read length extremely low read depth ENCFF000ZEI bigWig signal ENCSR000EWN ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF263-human ENCAB000AMT DNA see document see document False 2011-10-29 ENCODE 302964234 Peggy Farnham, USC 6fe8d0098bb3a359b5fc8ea9c2f5c8b5 https://www.encodeproject.org/files/ENCFF000ZEI/@@download/ENCFF000ZEI.bigWig hg19 archived biological replicates with identical biosample, missing derived_from insufficient read length extremely low read depth ENCFF000ZEX fastq reads ENCSR000EWN ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF263-human ENCAB000AMT DNA see document see document False 2011-10-29 ENCODE 1 1 27 single-ended 238050449 Peggy Farnham, USC 91e86905c665958ac087696d8ec70e5f https://www.encodeproject.org/files/ENCFF000ZEX/@@download/ENCFF000ZEX.fastq.gz Illumina Genome Analyzer /files/ENCFF000VEK/ released biological replicates with identical biosample insufficient read length extremely low read depth ENCFF000ZEY fastq reads ENCSR000EWN ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF263-human ENCAB000AMT DNA see document see document False 2011-10-29 ENCODE 2 1 27 single-ended 238439238 Peggy Farnham, USC 1a4539a3dba95c9d3f711050c241a5ef https://www.encodeproject.org/files/ENCFF000ZEY/@@download/ENCFF000ZEY.fastq.gz Illumina Genome Analyzer /files/ENCFF000VEK/ released biological replicates with identical biosample insufficient read length extremely low read depth ENCFF001VPM bed narrowPeak peaks ENCSR000EWN ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF263-human ENCAB000AMT DNA see document see document False 2011-10-29 ENCODE 47241 Peggy Farnham, USC de9000f06a3f75322cd7456ef370fb0e https://www.encodeproject.org/files/ENCFF001VPM/@@download/ENCFF001VPM.bed.gz hg19 archived biological replicates with identical biosample, missing derived_from insufficient read length extremely low read depth ENCFF002CYS bed narrowPeak optimal idr thresholded peaks ENCSR000EWN ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF263-human ENCAB000AMT DNA see document see document False 2011-10-29 ENCODE 63718 ENCODE Consortium Analysis Working Group 78068fe6a83e3950baf4430d38749f04 https://www.encodeproject.org/files/ENCFF002CYS/@@download/ENCFF002CYS.bed.gz hg19 archived biological replicates with identical biosample, missing derived_from insufficient read length extremely low read depth ENCFF094KGN bigBed narrowPeak optimal idr thresholded peaks ENCSR000EWN ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF263-human ENCAB000AMT DNA see document see document False 2011-10-29 ENCODE ENCFF002CYS 182942 ENCODE Consortium d651e7171592db1ae2539ebadb2be28f https://www.encodeproject.org/files/ENCFF094KGN/@@download/ENCFF094KGN.bigBed hg19 archived biological replicates with identical biosample insufficient read length extremely low read depth ENCFF594KMD bam unfiltered alignments ENCSR000EWN ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF263-human ENCAB000AMT DNA see document see document False 2011-10-29 ENCODE 2 27 ENCFF000ZEY, ENCFF643CGH 307210652 ENCODE Processing Pipeline 53d75d650c69eef8a61bef7a68b53517 https://www.encodeproject.org/files/ENCFF594KMD/@@download/ENCFF594KMD.bam GRCh38 released biological replicates with identical biosample insufficient read length extremely low read depth ENCFF728UEJ bam unfiltered alignments ENCSR000EWN ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF263-human ENCAB000AMT DNA see document see document False 2011-10-29 ENCODE 1 27 ENCFF000ZEX, ENCFF643CGH 306773345 ENCODE Processing Pipeline 58c9500c6fba41d9d33aa9db60149256 https://www.encodeproject.org/files/ENCFF728UEJ/@@download/ENCFF728UEJ.bam GRCh38 released biological replicates with identical biosample insufficient read length extremely low read depth ENCFF891GFG bam alignments ENCSR000EWN ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF263-human ENCAB000AMT DNA see document see document False 2011-10-29 ENCODE 2 27 ENCFF000ZEY, ENCFF643CGH 151136506 ENCODE Processing Pipeline 13c7b475820f057f029d42e5126c1d63 https://www.encodeproject.org/files/ENCFF891GFG/@@download/ENCFF891GFG.bam GRCh38 released biological replicates with identical biosample insufficient read length extremely low read depth ENCFF550BLP bigWig signal p-value ENCSR000EWN ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF263-human ENCAB000AMT DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF094FZQ, ENCFF355SGP, ENCFF891GFG 409251695 ENCODE Processing Pipeline 18c080e124813d016b87bbc973192ee9 https://www.encodeproject.org/files/ENCFF550BLP/@@download/ENCFF550BLP.bigWig GRCh38 released biological replicates with identical biosample insufficient read length extremely low read depth ENCFF888KVA bed narrowPeak peaks ENCSR000EWN ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF263-human ENCAB000AMT DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF094FZQ, ENCFF355SGP, ENCFF891GFG 5735739 ENCODE Processing Pipeline 227a36a7d0329d1261b53c42a94f920d https://www.encodeproject.org/files/ENCFF888KVA/@@download/ENCFF888KVA.bed.gz GRCh38 released biological replicates with identical biosample insufficient read length extremely low read depth ENCFF094FZQ bam alignments ENCSR000EWN ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF263-human ENCAB000AMT DNA see document see document False 2011-10-29 ENCODE 1 27 ENCFF000ZEX, ENCFF643CGH 146679334 ENCODE Processing Pipeline 25fda2567233b7d71b76970d7bd83bf3 https://www.encodeproject.org/files/ENCFF094FZQ/@@download/ENCFF094FZQ.bam GRCh38 released biological replicates with identical biosample insufficient read length extremely low read depth ENCFF592UVR bed narrowPeak peaks ENCSR000EWN ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF263-human ENCAB000AMT DNA see document see document False 2011-10-29 ENCODE 1 ENCFF094FZQ, ENCFF355SGP 3374152 ENCODE Processing Pipeline 6385ee0e480656089d579e10fb5b6418 https://www.encodeproject.org/files/ENCFF592UVR/@@download/ENCFF592UVR.bed.gz GRCh38 released biological replicates with identical biosample insufficient read length extremely low read depth ENCFF609MNU bigBed narrowPeak peaks ENCSR000EWN ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF263-human ENCAB000AMT DNA see document see document False 2011-10-29 ENCODE 2 ENCFF609SJE 9774031 ENCODE Processing Pipeline 5ac0454695230fbbd179d75f6bf47ce3 https://www.encodeproject.org/files/ENCFF609MNU/@@download/ENCFF609MNU.bigBed GRCh38 released biological replicates with identical biosample insufficient read length extremely low read depth ENCFF168INA bigBed narrowPeak peaks ENCSR000EWN ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF263-human ENCAB000AMT DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF888KVA 12403755 ENCODE Processing Pipeline 29936faffdeab3961283378f2fd613a4 https://www.encodeproject.org/files/ENCFF168INA/@@download/ENCFF168INA.bigBed GRCh38 released biological replicates with identical biosample insufficient read length extremely low read depth ENCFF322VHC bigWig fold change over control ENCSR000EWN ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF263-human ENCAB000AMT DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF094FZQ, ENCFF355SGP, ENCFF891GFG 230925044 ENCODE Processing Pipeline f5d0d25ad0fa333feafacd4c89fa49f4 https://www.encodeproject.org/files/ENCFF322VHC/@@download/ENCFF322VHC.bigWig GRCh38 released biological replicates with identical biosample insufficient read length extremely low read depth ENCFF609SJE bed narrowPeak peaks ENCSR000EWN ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF263-human ENCAB000AMT DNA see document see document False 2011-10-29 ENCODE 2 ENCFF355SGP, ENCFF891GFG 3963342 ENCODE Processing Pipeline e4ccab66aaa93ca0c41248d590eba94f https://www.encodeproject.org/files/ENCFF609SJE/@@download/ENCFF609SJE.bed.gz GRCh38 released biological replicates with identical biosample insufficient read length extremely low read depth ENCFF125VKL bigBed narrowPeak peaks ENCSR000EWN ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF263-human ENCAB000AMT DNA see document see document False 2011-10-29 ENCODE 1 ENCFF592UVR 8546343 ENCODE Processing Pipeline 54b71c6a6d3de0ae88b5375a7467c4a2 https://www.encodeproject.org/files/ENCFF125VKL/@@download/ENCFF125VKL.bigBed GRCh38 released biological replicates with identical biosample insufficient read length extremely low read depth ENCFF889OBU bigWig signal p-value ENCSR000EWN ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF263-human ENCAB000AMT DNA see document see document False 2011-10-29 ENCODE 1 ENCFF094FZQ, ENCFF355SGP 353436007 ENCODE Processing Pipeline ce65413fca80c0bbb33bf06168fe07fa https://www.encodeproject.org/files/ENCFF889OBU/@@download/ENCFF889OBU.bigWig GRCh38 released biological replicates with identical biosample insufficient read length extremely low read depth ENCFF281VWO bigWig fold change over control ENCSR000EWN ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF263-human ENCAB000AMT DNA see document see document False 2011-10-29 ENCODE 2 ENCFF355SGP, ENCFF891GFG 138056242 ENCODE Processing Pipeline e178cfcc85618d7e57e2c1bb052c7baa https://www.encodeproject.org/files/ENCFF281VWO/@@download/ENCFF281VWO.bigWig GRCh38 released biological replicates with identical biosample insufficient read length extremely low read depth ENCFF929SEP bigWig signal p-value ENCSR000EWN ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF263-human ENCAB000AMT DNA see document see document False 2011-10-29 ENCODE 2 ENCFF355SGP, ENCFF891GFG 336408605 ENCODE Processing Pipeline e84a7766cde2f29eb778045e921ef3be https://www.encodeproject.org/files/ENCFF929SEP/@@download/ENCFF929SEP.bigWig GRCh38 released biological replicates with identical biosample insufficient read length extremely low read depth ENCFF470UCI bigWig fold change over control ENCSR000EWN ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF263-human ENCAB000AMT DNA see document see document False 2011-10-29 ENCODE 1 ENCFF094FZQ, ENCFF355SGP 133727058 ENCODE Processing Pipeline bc6de96b011ab3f891b935fa60a2fa4b https://www.encodeproject.org/files/ENCFF470UCI/@@download/ENCFF470UCI.bigWig GRCh38 released biological replicates with identical biosample insufficient read length extremely low read depth ENCFF607PKH bed narrowPeak conservative idr thresholded peaks ENCSR000EWN ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF263-human ENCAB000AMT DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF419RSJ, ENCFF592UVR, ENCFF609SJE, ENCFF888KVA 65842 ENCODE Processing Pipeline 87ab138464b1f3a9d4db7651896f8565 https://www.encodeproject.org/files/ENCFF607PKH/@@download/ENCFF607PKH.bed.gz GRCh38 released biological replicates with identical biosample insufficient read length extremely low read depth ENCFF579ETM bed narrowPeak optimal idr thresholded peaks ENCSR000EWN ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF263-human ENCAB000AMT DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF419RSJ, ENCFF592UVR, ENCFF609SJE, ENCFF888KVA 67789 ENCODE Processing Pipeline b6c38bae2ef61a659aadf55b977a891a https://www.encodeproject.org/files/ENCFF579ETM/@@download/ENCFF579ETM.bed.gz GRCh38 released biological replicates with identical biosample insufficient read length extremely low read depth ENCFF583LTY bigBed narrowPeak conservative idr thresholded peaks ENCSR000EWN ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF263-human ENCAB000AMT DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF607PKH 188474 ENCODE Processing Pipeline 23bf3b1bc97f7b799343b675b7df102e https://www.encodeproject.org/files/ENCFF583LTY/@@download/ENCFF583LTY.bigBed GRCh38 released biological replicates with identical biosample insufficient read length extremely low read depth ENCFF115SMX bigBed narrowPeak optimal idr thresholded peaks ENCSR000EWN ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF263-human ENCAB000AMT DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF579ETM 191274 ENCODE Processing Pipeline e4dc5fa0d898124cd1528768d4501d54 https://www.encodeproject.org/files/ENCFF115SMX/@@download/ENCFF115SMX.bigBed GRCh38 released biological replicates with identical biosample insufficient read length extremely low read depth ENCFF362BFL bam alignments ENCSR000EWN ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF263-human ENCAB000AMT DNA see document see document False 2011-10-29 ENCODE 1 27 ENCFF000ZEX, ENCFF807MUK 146972851 ENCODE Processing Pipeline 987ecc629057affae433a925a2c99bb9 https://www.encodeproject.org/files/ENCFF362BFL/@@download/ENCFF362BFL.bam hg19 released biological replicates with identical biosample insufficient read length extremely low read depth ENCFF981FLC bigWig signal p-value ENCSR000EWN ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF263-human ENCAB000AMT DNA see document see document False 2011-10-29 ENCODE 1 ENCFF051ZZR, ENCFF362BFL 335854173 ENCODE Processing Pipeline 54f9ebe5790cdc1687b3acd9c4ac7a9e https://www.encodeproject.org/files/ENCFF981FLC/@@download/ENCFF981FLC.bigWig hg19 released biological replicates with identical biosample insufficient read length extremely low read depth ENCFF834RLQ bigWig signal p-value ENCSR000EWN ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF263-human ENCAB000AMT DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF051ZZR, ENCFF221GJM, ENCFF362BFL 390120749 ENCODE Processing Pipeline 1826b2eea791d777dff5faa0e34677d6 https://www.encodeproject.org/files/ENCFF834RLQ/@@download/ENCFF834RLQ.bigWig hg19 released biological replicates with identical biosample insufficient read length extremely low read depth ENCFF051FKL bed narrowPeak peaks ENCSR000EWN ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF263-human ENCAB000AMT DNA see document see document False 2011-10-29 ENCODE 1 ENCFF051ZZR, ENCFF362BFL 3582959 ENCODE Processing Pipeline d37e6204205236600c1cd7fc27b279c0 https://www.encodeproject.org/files/ENCFF051FKL/@@download/ENCFF051FKL.bed.gz hg19 released biological replicates with identical biosample insufficient read length extremely low read depth ENCFF221GJM bam alignments ENCSR000EWN ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF263-human ENCAB000AMT DNA see document see document False 2011-10-29 ENCODE 2 27 ENCFF000ZEY, ENCFF807MUK 151423686 ENCODE Processing Pipeline f36189516a35d2767a251bb3905cb27b https://www.encodeproject.org/files/ENCFF221GJM/@@download/ENCFF221GJM.bam hg19 released biological replicates with identical biosample insufficient read length extremely low read depth ENCFF318FFG bigWig fold change over control ENCSR000EWN ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF263-human ENCAB000AMT DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF051ZZR, ENCFF221GJM, ENCFF362BFL 229392975 ENCODE Processing Pipeline a5e5f2a6b2ab105cf056dccef87535ff https://www.encodeproject.org/files/ENCFF318FFG/@@download/ENCFF318FFG.bigWig hg19 released biological replicates with identical biosample insufficient read length extremely low read depth ENCFF961JKM bam unfiltered alignments ENCSR000EWN ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF263-human ENCAB000AMT DNA see document see document False 2011-10-29 ENCODE 2 27 ENCFF000ZEY, ENCFF807MUK 306717959 ENCODE Processing Pipeline c3845b38b5f02361184168f5d25724b4 https://www.encodeproject.org/files/ENCFF961JKM/@@download/ENCFF961JKM.bam hg19 released biological replicates with identical biosample insufficient read length extremely low read depth ENCFF819ANL bam unfiltered alignments ENCSR000EWN ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF263-human ENCAB000AMT DNA see document see document False 2011-10-29 ENCODE 1 27 ENCFF000ZEX, ENCFF807MUK 306187671 ENCODE Processing Pipeline 59bb2bd7c9c833f8eed4b1ac678c2c3b https://www.encodeproject.org/files/ENCFF819ANL/@@download/ENCFF819ANL.bam hg19 released biological replicates with identical biosample insufficient read length extremely low read depth ENCFF893NEX bigWig signal p-value ENCSR000EWN ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF263-human ENCAB000AMT DNA see document see document False 2011-10-29 ENCODE 2 ENCFF051ZZR, ENCFF221GJM 340119608 ENCODE Processing Pipeline 7b8e1d6a7f86cbb43de1e88a828796f5 https://www.encodeproject.org/files/ENCFF893NEX/@@download/ENCFF893NEX.bigWig hg19 released biological replicates with identical biosample insufficient read length extremely low read depth ENCFF534CIT bigWig fold change over control ENCSR000EWN ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF263-human ENCAB000AMT DNA see document see document False 2011-10-29 ENCODE 1 ENCFF051ZZR, ENCFF362BFL 132374282 ENCODE Processing Pipeline 9787ddf17d57226b3315c3e3c80475ec https://www.encodeproject.org/files/ENCFF534CIT/@@download/ENCFF534CIT.bigWig hg19 released biological replicates with identical biosample insufficient read length extremely low read depth ENCFF597SRL bigWig fold change over control ENCSR000EWN ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF263-human ENCAB000AMT DNA see document see document False 2011-10-29 ENCODE 2 ENCFF051ZZR, ENCFF221GJM 136760340 ENCODE Processing Pipeline bb562e13d50ea90a03b77fa2a9f3f3b5 https://www.encodeproject.org/files/ENCFF597SRL/@@download/ENCFF597SRL.bigWig hg19 released biological replicates with identical biosample insufficient read length extremely low read depth ENCFF100FXA bed narrowPeak peaks ENCSR000EWN ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF263-human ENCAB000AMT DNA see document see document False 2011-10-29 ENCODE 2 ENCFF051ZZR, ENCFF221GJM 4035379 ENCODE Processing Pipeline c3ae106011943b7122e307a0f977bc5b https://www.encodeproject.org/files/ENCFF100FXA/@@download/ENCFF100FXA.bed.gz hg19 released biological replicates with identical biosample insufficient read length extremely low read depth ENCFF537UES bed narrowPeak peaks ENCSR000EWN ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF263-human ENCAB000AMT DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF051ZZR, ENCFF221GJM, ENCFF362BFL 5931174 ENCODE Processing Pipeline dabddf6f455929722bd64e2fc6242da2 https://www.encodeproject.org/files/ENCFF537UES/@@download/ENCFF537UES.bed.gz hg19 released biological replicates with identical biosample insufficient read length extremely low read depth ENCFF830NTS bigBed narrowPeak peaks ENCSR000EWN ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF263-human ENCAB000AMT DNA see document see document False 2011-10-29 ENCODE 1 ENCFF051FKL 8770201 ENCODE Processing Pipeline 4a094c94dd6163241e679087e7aff7f5 https://www.encodeproject.org/files/ENCFF830NTS/@@download/ENCFF830NTS.bigBed hg19 released biological replicates with identical biosample insufficient read length extremely low read depth ENCFF696HVU bigBed narrowPeak peaks ENCSR000EWN ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF263-human ENCAB000AMT DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF537UES 12581668 ENCODE Processing Pipeline aa96bf5fede5ad13f6b170ad973204f3 https://www.encodeproject.org/files/ENCFF696HVU/@@download/ENCFF696HVU.bigBed hg19 released biological replicates with identical biosample insufficient read length extremely low read depth ENCFF891MVM bed narrowPeak optimal idr thresholded peaks ENCSR000EWN ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF263-human ENCAB000AMT DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF001TDO, ENCFF051FKL, ENCFF100FXA, ENCFF537UES 67975 ENCODE Processing Pipeline 6f1947b757a7ffc01cf96e02420dce62 https://www.encodeproject.org/files/ENCFF891MVM/@@download/ENCFF891MVM.bed.gz hg19 released biological replicates with identical biosample insufficient read length extremely low read depth ENCFF213OFN bigBed narrowPeak optimal idr thresholded peaks ENCSR000EWN ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF263-human ENCAB000AMT DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF891MVM 190171 ENCODE Processing Pipeline 5295f582d553f9bd7abd2e9f7edaf0ec https://www.encodeproject.org/files/ENCFF213OFN/@@download/ENCFF213OFN.bigBed hg19 released biological replicates with identical biosample insufficient read length extremely low read depth ENCFF201NNF bigBed narrowPeak peaks ENCSR000EWN ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF263-human ENCAB000AMT DNA see document see document False 2011-10-29 ENCODE 2 ENCFF100FXA 9896056 ENCODE Processing Pipeline 4c09d4c8b32a716456ffa96ea107dbc0 https://www.encodeproject.org/files/ENCFF201NNF/@@download/ENCFF201NNF.bigBed hg19 released biological replicates with identical biosample insufficient read length extremely low read depth ENCFF000YXJ bam alignments ENCSR000EHF ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2AphosphoS2-human ENCAB000AOB DNA see document see document False 2011-10-29 ENCODE 2 ENCFF000YXU 130816027 Michael Snyder, Stanford 74fb76b4cd38cdee35e54ba10bda3da3 https://www.encodeproject.org/files/ENCFF000YXJ/@@download/ENCFF000YXJ.bam hg19 released biological replicates with identical biosample insufficient read length ENCFF000YXK bam alignments ENCSR000EHF ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2AphosphoS2-human ENCAB000AOB DNA see document see document False 2011-10-29 ENCODE 1 ENCFF000YXV 165257038 Michael Snyder, Stanford 79dcc36f6d98c66d0fe4d09370a33afa https://www.encodeproject.org/files/ENCFF000YXK/@@download/ENCFF000YXK.bam hg19 released biological replicates with identical biosample insufficient read length ENCFF000YXL bigBed narrowPeak peaks ENCSR000EHF ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2AphosphoS2-human ENCAB000AOB DNA see document see document False 2011-10-29 ENCODE ENCFF001VOK 2294180 Michael Snyder, Stanford 5964f187f7470842b2eb62eafb48837a https://www.encodeproject.org/files/ENCFF000YXL/@@download/ENCFF000YXL.bigBed hg19 released biological replicates with identical biosample insufficient read length ENCFF000YXM bigWig signal ENCSR000EHF ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2AphosphoS2-human ENCAB000AOB DNA see document see document False 2011-10-29 ENCODE 145951771 Michael Snyder, Stanford 92b18c6fdad57668cdb1fb10fea45902 https://www.encodeproject.org/files/ENCFF000YXM/@@download/ENCFF000YXM.bigWig hg19 released biological replicates with identical biosample, missing derived_from insufficient read length ENCFF000YXU fastq reads ENCSR000EHF ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2AphosphoS2-human ENCAB000AOB DNA see document see document False 2011-10-29 ENCODE 2 1 27 single-ended 222102742 Michael Snyder, Stanford 8cbff4d3a3fc89013eefe31cfcdd2019 https://www.encodeproject.org/files/ENCFF000YXU/@@download/ENCFF000YXU.fastq.gz Illumina Genome Analyzer /files/ENCFF000YRC/ released biological replicates with identical biosample insufficient read length ENCFF000YXV fastq reads ENCSR000EHF ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2AphosphoS2-human ENCAB000AOB DNA see document see document False 2011-10-29 ENCODE 1 1 27 single-ended 266163059 Michael Snyder, Stanford ff686b6d19cb2abf6f508f95a0189ad3 https://www.encodeproject.org/files/ENCFF000YXV/@@download/ENCFF000YXV.fastq.gz Illumina Genome Analyzer /files/ENCFF000YRN/ released biological replicates with identical biosample insufficient read length ENCFF001VOK bed narrowPeak peaks ENCSR000EHF ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2AphosphoS2-human ENCAB000AOB DNA see document see document False 2011-10-29 ENCODE 1227266 Michael Snyder, Stanford 3dce75d663db7e3d0db775c02bba0fd2 https://www.encodeproject.org/files/ENCFF001VOK/@@download/ENCFF001VOK.bed.gz hg19 released biological replicates with identical biosample, missing derived_from insufficient read length ENCFF002DDU bed narrowPeak optimal idr thresholded peaks ENCSR000EHF ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2AphosphoS2-human ENCAB000AOB DNA see document see document False 2011-10-29 ENCODE 44670 ENCODE Consortium Analysis Working Group b080f173f628f221e5b9d573a1a10fe3 https://www.encodeproject.org/files/ENCFF002DDU/@@download/ENCFF002DDU.bed.gz hg19 released biological replicates with identical biosample, missing derived_from insufficient read length ENCFF268RRD bigBed narrowPeak optimal idr thresholded peaks ENCSR000EHF ChIP-seq EFO:0002067 K562 cell line Homo sapiens POLR2AphosphoS2-human ENCAB000AOB DNA see document see document False 2011-10-29 ENCODE ENCFF002DDU 170907 ENCODE Consortium 843a52b6210c62b21007a56bc77b6b10 https://www.encodeproject.org/files/ENCFF268RRD/@@download/ENCFF268RRD.bigBed hg19 released biological replicates with identical biosample insufficient read length ENCFF000YUN bigBed narrowPeak peaks ENCSR000FAF ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFE2-human ENCAB000AJA DNA see document see document False 2011-10-29 ENCODE ENCFF001VNX 127967 Sherman Weissman, Yale ed094e0bdd49afe0a1bf9da2eda1ea8c https://www.encodeproject.org/files/ENCFF000YUN/@@download/ENCFF000YUN.bigBed hg19 released biological replicates with identical biosample insufficient read length ENCFF000YUO bigWig signal ENCSR000FAF ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFE2-human ENCAB000AJA DNA see document see document False 2011-10-29 ENCODE 305967248 Sherman Weissman, Yale 7abe72aaf50c7a618848ae199d2d1703 https://www.encodeproject.org/files/ENCFF000YUO/@@download/ENCFF000YUO.bigWig hg19 released biological replicates with identical biosample, missing derived_from insufficient read length ENCFF000YUP bam alignments ENCSR000FAF ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFE2-human ENCAB000AJA DNA see document see document False 2011-10-29 ENCODE 1 ENCFF000YVD 235932637 Sherman Weissman, Yale 5b72856ac7aecab95a0652bebf7de4f6 https://www.encodeproject.org/files/ENCFF000YUP/@@download/ENCFF000YUP.bam hg19 released biological replicates with identical biosample insufficient read length ENCFF000YUQ bam alignments ENCSR000FAF ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFE2-human ENCAB000AJA DNA see document see document False 2011-10-29 ENCODE 2 ENCFF000YVH 213944831 Sherman Weissman, Yale 10126cfa6d815c97244a25c2b3a3e35f https://www.encodeproject.org/files/ENCFF000YUQ/@@download/ENCFF000YUQ.bam hg19 released biological replicates with identical biosample insufficient read length ENCFF000YVD fastq reads ENCSR000FAF ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFE2-human ENCAB000AJA DNA see document see document False 2011-10-29 ENCODE 1 1 27 single-ended 178642619 Sherman Weissman, Yale 061d2ddacc1eb03a13e6229d51105261 https://www.encodeproject.org/files/ENCFF000YVD/@@download/ENCFF000YVD.fastq.gz Illumina Genome Analyzer released biological replicates with identical biosample insufficient read length, missing controlled_by ENCFF000YVH fastq reads ENCSR000FAF ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFE2-human ENCAB000AJA DNA see document see document False 2011-10-29 ENCODE 2 1 27 single-ended 160994932 Sherman Weissman, Yale 88dab91f447b30537917cb15d6f13918 https://www.encodeproject.org/files/ENCFF000YVH/@@download/ENCFF000YVH.fastq.gz Illumina Genome Analyzer released biological replicates with identical biosample insufficient read length, missing controlled_by ENCFF001VNX bed narrowPeak peaks ENCSR000FAF ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFE2-human ENCAB000AJA DNA see document see document False 2011-10-29 ENCODE 29060 Sherman Weissman, Yale 3d953871c7379fe1b0ce7a5c0776b24e https://www.encodeproject.org/files/ENCFF001VNX/@@download/ENCFF001VNX.bed.gz hg19 released biological replicates with identical biosample, missing derived_from insufficient read length ENCFF002CXH bed narrowPeak optimal idr thresholded peaks ENCSR000FAF ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFE2-human ENCAB000AJA DNA see document see document False 2011-10-29 ENCODE 53709 ENCODE Consortium Analysis Working Group 3fa5b2aaff7064f6bb43628c6a33c4a5 https://www.encodeproject.org/files/ENCFF002CXH/@@download/ENCFF002CXH.bed.gz hg19 released biological replicates with identical biosample, missing derived_from insufficient read length ENCFF307PPJ bigBed narrowPeak optimal idr thresholded peaks ENCSR000FAF ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFE2-human ENCAB000AJA DNA see document see document False 2011-10-29 ENCODE ENCFF002CXH 156951 ENCODE Consortium c37f5d4004d1c60c5380e5aaad382990 https://www.encodeproject.org/files/ENCFF307PPJ/@@download/ENCFF307PPJ.bigBed hg19 released biological replicates with identical biosample insufficient read length ENCFF000YUX bam alignments ENCSR000EGQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFYB-human ENCAB000AJD DNA see document see document False 2011-10-29 ENCODE 1 ENCFF000YVV 127087551 Michael Snyder, Stanford 124c0dc495c1c7fac48201a79590189b https://www.encodeproject.org/files/ENCFF000YUX/@@download/ENCFF000YUX.bam hg19 archived mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read length extremely low read depth ENCFF000YUY bam alignments ENCSR000EGQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFYB-human ENCAB000AJD DNA see document see document False 2011-10-29 ENCODE 2 ENCFF000YVA, ENCFF000YVB 133241585 Michael Snyder, Stanford 746d572096cd32f65477ce34c8e12d30 https://www.encodeproject.org/files/ENCFF000YUY/@@download/ENCFF000YUY.bam hg19 archived mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read length extremely low read depth ENCFF000YUZ bigBed narrowPeak peaks ENCSR000EGQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFYB-human ENCAB000AJD DNA see document see document False 2011-10-29 ENCODE ENCFF001VNZ 943187 Michael Snyder, Stanford 99c74c7cc4c0d94217bdc3d1358bacc4 https://www.encodeproject.org/files/ENCFF000YUZ/@@download/ENCFF000YUZ.bigBed hg19 archived mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read length extremely low read depth ENCFF000YVA fastq reads ENCSR000EGQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFYB-human ENCAB000AJD DNA see document see document False 2011-10-29 ENCODE 2 1 34 single-ended 300001902 Michael Snyder, Stanford fb27a348287213d17a1d5282e8fe1abe https://www.encodeproject.org/files/ENCFF000YVA/@@download/ENCFF000YVA.fastq.gz Illumina Genome Analyzer /files/ENCFF000YRC/ released inconsistent control read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read length extremely low read depth ENCFF000YVC bigWig signal ENCSR000EGQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFYB-human ENCAB000AJD DNA see document see document False 2011-10-29 ENCODE 85454639 Michael Snyder, Stanford 4a56cf0ff6c926957a6f035dcf4eaa3f https://www.encodeproject.org/files/ENCFF000YVC/@@download/ENCFF000YVC.bigWig hg19 archived mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample, missing derived_from insufficient read length extremely low read depth ENCFF000YVV fastq reads ENCSR000EGQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFYB-human ENCAB000AJD DNA see document see document False 2011-10-29 ENCODE 1 1 34 single-ended 671619381 Michael Snyder, Stanford 86979261bda41907cc8970c2f59e1352 https://www.encodeproject.org/files/ENCFF000YVV/@@download/ENCFF000YVV.fastq.gz Illumina Genome Analyzer /files/ENCFF000YRN/ released inconsistent control read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read length extremely low read depth ENCFF001VNZ bed narrowPeak peaks ENCSR000EGQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFYB-human ENCAB000AJD DNA see document see document False 2011-10-29 ENCODE 373965 Michael Snyder, Stanford 8c433880d36d2a0b9ffee991cba1904e https://www.encodeproject.org/files/ENCFF001VNZ/@@download/ENCFF001VNZ.bed.gz hg19 archived mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample, missing derived_from insufficient read length extremely low read depth ENCFF002CXJ bed narrowPeak optimal idr thresholded peaks ENCSR000EGQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFYB-human ENCAB000AJD DNA see document see document False 2011-10-29 ENCODE 207601 ENCODE Consortium Analysis Working Group 7ba84d9348d64c9aa4530e5b7b77c40e https://www.encodeproject.org/files/ENCFF002CXJ/@@download/ENCFF002CXJ.bed.gz hg19 archived mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample, missing derived_from insufficient read length extremely low read depth ENCFF000YVB fastq reads ENCSR000EGQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFYB-human ENCAB000AJD DNA see document see document False 2011-10-29 ENCODE 2 1 34 single-ended 233083006 Michael Snyder, Stanford ae431f2a97646e5515ecc2734e7278df https://www.encodeproject.org/files/ENCFF000YVB/@@download/ENCFF000YVB.fastq.gz Illumina Genome Analyzer /files/ENCFF000YRC/ released inconsistent control read length, mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read length extremely low read depth ENCFF954VKV bigBed narrowPeak optimal idr thresholded peaks ENCSR000EGQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFYB-human ENCAB000AJD DNA see document see document False 2011-10-29 ENCODE ENCFF002CXJ 477057 ENCODE Consortium facbb97b7402521117c882e8935a0728 https://www.encodeproject.org/files/ENCFF954VKV/@@download/ENCFF954VKV.bigBed hg19 archived mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read length extremely low read depth ENCFF068JXL bam unfiltered alignments ENCSR000EGQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFYB-human ENCAB000AJD DNA see document see document False 2011-10-29 ENCODE 2 27 ENCFF000YVA, ENCFF000YVB, ENCFF643CGH 515736767 ENCODE Processing Pipeline 7366fa4faf57487f4a083a21f98c91dd https://www.encodeproject.org/files/ENCFF068JXL/@@download/ENCFF068JXL.bam GRCh38 released mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read length extremely low read depth ENCFF817VBY bam alignments ENCSR000EGQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFYB-human ENCAB000AJD DNA see document see document False 2011-10-29 ENCODE 1 27 ENCFF000YVV, ENCFF643CGH 158418640 ENCODE Processing Pipeline cb38d29390d3266bc0c32826653a9dc4 https://www.encodeproject.org/files/ENCFF817VBY/@@download/ENCFF817VBY.bam GRCh38 released mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read length extremely low read depth ENCFF931ZBX bam unfiltered alignments ENCSR000EGQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFYB-human ENCAB000AJD DNA see document see document False 2011-10-29 ENCODE 2 27 ENCFF000YVA, ENCFF000YVB, ENCFF807MUK 515047417 ENCODE Processing Pipeline c5f592c5cf63bd40d71c0b8d493f713e https://www.encodeproject.org/files/ENCFF931ZBX/@@download/ENCFF931ZBX.bam hg19 released mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read length extremely low read depth ENCFF076LDA bam unfiltered alignments ENCSR000EGQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFYB-human ENCAB000AJD DNA see document see document False 2011-10-29 ENCODE 1 27 ENCFF000YVV, ENCFF807MUK 683007394 ENCODE Processing Pipeline 7de3d79545b85d409be4a1ea9749c90c https://www.encodeproject.org/files/ENCFF076LDA/@@download/ENCFF076LDA.bam hg19 released mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read length extremely low read depth ENCFF161SAR bigWig fold change over control ENCSR000EGQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFYB-human ENCAB000AJD DNA see document see document False 2011-10-29 ENCODE 1 ENCFF123YHB, ENCFF332BFE, ENCFF817VBY 110424185 ENCODE Processing Pipeline b6d27a6132591569b3a2e82d52019fd4 https://www.encodeproject.org/files/ENCFF161SAR/@@download/ENCFF161SAR.bigWig GRCh38 released mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read length extremely low read depth ENCFF953KUA bigWig signal p-value ENCSR000EGQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFYB-human ENCAB000AJD DNA see document see document False 2011-10-29 ENCODE 2 ENCFF123YHB, ENCFF267XWV, ENCFF332BFE 322575934 ENCODE Processing Pipeline 744e76dbcbcd14794ad7f9d6801e49a4 https://www.encodeproject.org/files/ENCFF953KUA/@@download/ENCFF953KUA.bigWig GRCh38 released mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read length extremely low read depth ENCFF234JFJ bigWig signal p-value ENCSR000EGQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFYB-human ENCAB000AJD DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF123YHB, ENCFF267XWV, ENCFF332BFE, ENCFF817VBY 341118763 ENCODE Processing Pipeline ff629d7655492bda07feb8ebb214a947 https://www.encodeproject.org/files/ENCFF234JFJ/@@download/ENCFF234JFJ.bigWig GRCh38 released mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read length extremely low read depth ENCFF097JMC bed narrowPeak peaks ENCSR000EGQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFYB-human ENCAB000AJD DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF123YHB, ENCFF267XWV, ENCFF332BFE, ENCFF817VBY 2477891 ENCODE Processing Pipeline cff121e3c1e381d27b3704b5dde68d1a https://www.encodeproject.org/files/ENCFF097JMC/@@download/ENCFF097JMC.bed.gz GRCh38 released mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read length extremely low read depth ENCFF267XWV bam alignments ENCSR000EGQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFYB-human ENCAB000AJD DNA see document see document False 2011-10-29 ENCODE 2 27 ENCFF000YVA, ENCFF000YVB, ENCFF643CGH 146873192 ENCODE Processing Pipeline b6ef47652bb0ead53837797291bf4ee2 https://www.encodeproject.org/files/ENCFF267XWV/@@download/ENCFF267XWV.bam GRCh38 released mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read length extremely low read depth ENCFF767RBF bam alignments ENCSR000EGQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFYB-human ENCAB000AJD DNA see document see document False 2011-10-29 ENCODE 2 27 ENCFF000YVA, ENCFF000YVB, ENCFF807MUK 147080853 ENCODE Processing Pipeline 80688aa914da300f6fa8f792d1d21ffa https://www.encodeproject.org/files/ENCFF767RBF/@@download/ENCFF767RBF.bam hg19 released mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read length extremely low read depth ENCFF838ILZ bam unfiltered alignments ENCSR000EGQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFYB-human ENCAB000AJD DNA see document see document False 2011-10-29 ENCODE 1 27 ENCFF000YVV, ENCFF643CGH 684400892 ENCODE Processing Pipeline 9c59363192732dcb66f5794d96dfb363 https://www.encodeproject.org/files/ENCFF838ILZ/@@download/ENCFF838ILZ.bam GRCh38 released mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read length extremely low read depth ENCFF198JIR bam alignments ENCSR000EGQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFYB-human ENCAB000AJD DNA see document see document False 2011-10-29 ENCODE 1 27 ENCFF000YVV, ENCFF807MUK 158647685 ENCODE Processing Pipeline c33afa34d6b28256d1c01324d46df36f https://www.encodeproject.org/files/ENCFF198JIR/@@download/ENCFF198JIR.bam hg19 released mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read length extremely low read depth ENCFF290RAY bigWig signal p-value ENCSR000EGQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFYB-human ENCAB000AJD DNA see document see document False 2011-10-29 ENCODE 1 ENCFF123YHB, ENCFF332BFE, ENCFF817VBY 318743339 ENCODE Processing Pipeline 623bf39578488178729febde87744a03 https://www.encodeproject.org/files/ENCFF290RAY/@@download/ENCFF290RAY.bigWig GRCh38 released mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read length extremely low read depth ENCFF972KIO bigWig fold change over control ENCSR000EGQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFYB-human ENCAB000AJD DNA see document see document False 2011-10-29 ENCODE 2 ENCFF123YHB, ENCFF267XWV, ENCFF332BFE 95548265 ENCODE Processing Pipeline aed5b22398da334e41d49aa2aeeef77e https://www.encodeproject.org/files/ENCFF972KIO/@@download/ENCFF972KIO.bigWig GRCh38 released mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read length extremely low read depth ENCFF998IRY bigWig fold change over control ENCSR000EGQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFYB-human ENCAB000AJD DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF123YHB, ENCFF267XWV, ENCFF332BFE, ENCFF817VBY 184737480 ENCODE Processing Pipeline dc86f07bdab611775a70a7ec9aa90db2 https://www.encodeproject.org/files/ENCFF998IRY/@@download/ENCFF998IRY.bigWig GRCh38 released mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read length extremely low read depth ENCFF739OEE bed narrowPeak peaks ENCSR000EGQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFYB-human ENCAB000AJD DNA see document see document False 2011-10-29 ENCODE 2 ENCFF123YHB, ENCFF267XWV, ENCFF332BFE 1057883 ENCODE Processing Pipeline a56c1106500d5e5b6f9599fc8fa5c9e2 https://www.encodeproject.org/files/ENCFF739OEE/@@download/ENCFF739OEE.bed.gz GRCh38 released mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read length extremely low read depth ENCFF182SIK bigBed narrowPeak peaks ENCSR000EGQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFYB-human ENCAB000AJD DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF097JMC 6085786 ENCODE Processing Pipeline 427de29f6374e67c9eeab06ce6f3a9f9 https://www.encodeproject.org/files/ENCFF182SIK/@@download/ENCFF182SIK.bigBed GRCh38 released mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read length extremely low read depth ENCFF419XYC bigBed narrowPeak peaks ENCSR000EGQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFYB-human ENCAB000AJD DNA see document see document False 2011-10-29 ENCODE 1 ENCFF753UAY 2306481 ENCODE Processing Pipeline 4229204538d129139e21d09d90b24ffd https://www.encodeproject.org/files/ENCFF419XYC/@@download/ENCFF419XYC.bigBed GRCh38 released mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read length extremely low read depth ENCFF753UAY bed narrowPeak peaks ENCSR000EGQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFYB-human ENCAB000AJD DNA see document see document False 2011-10-29 ENCODE 1 ENCFF123YHB, ENCFF332BFE, ENCFF817VBY 1031635 ENCODE Processing Pipeline c85b2e820af8b6fabaec0539fd7cb899 https://www.encodeproject.org/files/ENCFF753UAY/@@download/ENCFF753UAY.bed.gz GRCh38 released mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read length extremely low read depth ENCFF699OWJ bigBed narrowPeak peaks ENCSR000EGQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFYB-human ENCAB000AJD DNA see document see document False 2011-10-29 ENCODE 2 ENCFF739OEE 2288966 ENCODE Processing Pipeline e38fb3e88061954c11b3e7b73d2e25c8 https://www.encodeproject.org/files/ENCFF699OWJ/@@download/ENCFF699OWJ.bigBed GRCh38 released mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read length extremely low read depth ENCFF009NXK bed narrowPeak optimal idr thresholded peaks ENCSR000EGQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFYB-human ENCAB000AJD DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF097JMC, ENCFF419RSJ, ENCFF739OEE, ENCFF753UAY 163438 ENCODE Processing Pipeline 6f6bd74c9e69027ea71f11ea2266e469 https://www.encodeproject.org/files/ENCFF009NXK/@@download/ENCFF009NXK.bed.gz GRCh38 released mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read length extremely low read depth ENCFF897LDW bed narrowPeak conservative idr thresholded peaks ENCSR000EGQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFYB-human ENCAB000AJD DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF097JMC, ENCFF419RSJ, ENCFF739OEE, ENCFF753UAY 152894 ENCODE Processing Pipeline 51546032b6e853dda3d59c3856a8e7dc https://www.encodeproject.org/files/ENCFF897LDW/@@download/ENCFF897LDW.bed.gz GRCh38 released mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read length extremely low read depth ENCFF791BEB bigBed narrowPeak optimal idr thresholded peaks ENCSR000EGQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFYB-human ENCAB000AJD DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF009NXK 316692 ENCODE Processing Pipeline e878cec8875799e8201d97490fbb41db https://www.encodeproject.org/files/ENCFF791BEB/@@download/ENCFF791BEB.bigBed GRCh38 released mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read length extremely low read depth ENCFF781SST bigBed narrowPeak conservative idr thresholded peaks ENCSR000EGQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFYB-human ENCAB000AJD DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF897LDW 301967 ENCODE Processing Pipeline f5d0792712d7d356f1b7d8cd496c08c3 https://www.encodeproject.org/files/ENCFF781SST/@@download/ENCFF781SST.bigBed GRCh38 released mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read length extremely low read depth ENCFF532COO bigBed narrowPeak peaks ENCSR000EGQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFYB-human ENCAB000AJD DNA see document see document False 2011-10-29 ENCODE 1 ENCFF570JVX 2332300 ENCODE Processing Pipeline 8c5ff46a6393374c3ba2a1f9c6e45f74 https://www.encodeproject.org/files/ENCFF532COO/@@download/ENCFF532COO.bigBed hg19 released mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read length extremely low read depth ENCFF113PMT bed narrowPeak optimal idr thresholded peaks ENCSR000EGQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFYB-human ENCAB000AJD DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF001TDO, ENCFF180NNF, ENCFF193FRQ, ENCFF570JVX 159170 ENCODE Processing Pipeline 17bb2e1d538afdee207dfa2b58c5fa95 https://www.encodeproject.org/files/ENCFF113PMT/@@download/ENCFF113PMT.bed.gz hg19 released mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read length extremely low read depth ENCFF110HWZ bigBed narrowPeak optimal idr thresholded peaks ENCSR000EGQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFYB-human ENCAB000AJD DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF113PMT 310785 ENCODE Processing Pipeline 17ff5452708e8fa43b6333ebe8d8925a https://www.encodeproject.org/files/ENCFF110HWZ/@@download/ENCFF110HWZ.bigBed hg19 released mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read length extremely low read depth ENCFF180NNF bed narrowPeak peaks ENCSR000EGQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFYB-human ENCAB000AJD DNA see document see document False 2011-10-29 ENCODE 2 ENCFF408YZH, ENCFF679XFJ, ENCFF767RBF 1061408 ENCODE Processing Pipeline 5c9072fe36bd7389f2865e50f52d2cf5 https://www.encodeproject.org/files/ENCFF180NNF/@@download/ENCFF180NNF.bed.gz hg19 released mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read length extremely low read depth ENCFF193FRQ bed narrowPeak peaks ENCSR000EGQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFYB-human ENCAB000AJD DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF198JIR, ENCFF408YZH, ENCFF679XFJ, ENCFF767RBF 2482503 ENCODE Processing Pipeline 21f7fdf7937f1054195cfa1370ae3445 https://www.encodeproject.org/files/ENCFF193FRQ/@@download/ENCFF193FRQ.bed.gz hg19 released mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read length extremely low read depth ENCFF676RBE bigWig signal p-value ENCSR000EGQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFYB-human ENCAB000AJD DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF198JIR, ENCFF408YZH, ENCFF679XFJ, ENCFF767RBF 348351615 ENCODE Processing Pipeline dcece7b770318cc945f67b1dbd8d6b37 https://www.encodeproject.org/files/ENCFF676RBE/@@download/ENCFF676RBE.bigWig hg19 released mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read length extremely low read depth ENCFF980CRX bigWig fold change over control ENCSR000EGQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFYB-human ENCAB000AJD DNA see document see document False 2011-10-29 ENCODE 2 ENCFF408YZH, ENCFF679XFJ, ENCFF767RBF 95252901 ENCODE Processing Pipeline 1faa8c5220b7d6b4ee1f1555e02a033b https://www.encodeproject.org/files/ENCFF980CRX/@@download/ENCFF980CRX.bigWig hg19 released mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read length extremely low read depth ENCFF570JVX bed narrowPeak peaks ENCSR000EGQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFYB-human ENCAB000AJD DNA see document see document False 2011-10-29 ENCODE 1 ENCFF198JIR, ENCFF408YZH, ENCFF679XFJ 1050923 ENCODE Processing Pipeline ca2172ab129944366ef6e528a0d83bcf https://www.encodeproject.org/files/ENCFF570JVX/@@download/ENCFF570JVX.bed.gz hg19 released mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read length extremely low read depth ENCFF318PKN bigBed narrowPeak peaks ENCSR000EGQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFYB-human ENCAB000AJD DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF193FRQ 6091864 ENCODE Processing Pipeline a0a1ca6d3adc1b859ec0a5988bc04eb2 https://www.encodeproject.org/files/ENCFF318PKN/@@download/ENCFF318PKN.bigBed hg19 released mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read length extremely low read depth ENCFF413KEY bigBed narrowPeak conservative idr thresholded peaks ENCSR000EGQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFYB-human ENCAB000AJD DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF561PGE 302040 ENCODE Processing Pipeline e5d06b7ae42d3c956e589d9efd30dc2e https://www.encodeproject.org/files/ENCFF413KEY/@@download/ENCFF413KEY.bigBed hg19 released mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read length extremely low read depth ENCFF670OTV bigWig signal p-value ENCSR000EGQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFYB-human ENCAB000AJD DNA see document see document False 2011-10-29 ENCODE 1 ENCFF198JIR, ENCFF408YZH, ENCFF679XFJ 325637002 ENCODE Processing Pipeline 12e988cb86e2f3883ac73e9988f078f9 https://www.encodeproject.org/files/ENCFF670OTV/@@download/ENCFF670OTV.bigWig hg19 released mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read length extremely low read depth ENCFF547XEW bigWig fold change over control ENCSR000EGQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFYB-human ENCAB000AJD DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF198JIR, ENCFF408YZH, ENCFF679XFJ, ENCFF767RBF 186238421 ENCODE Processing Pipeline 00e2acb35cfcfd188ffd3361c1e91d3a https://www.encodeproject.org/files/ENCFF547XEW/@@download/ENCFF547XEW.bigWig hg19 released mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read length extremely low read depth ENCFF789LYZ bigWig fold change over control ENCSR000EGQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFYB-human ENCAB000AJD DNA see document see document False 2011-10-29 ENCODE 1 ENCFF198JIR, ENCFF408YZH, ENCFF679XFJ 109892474 ENCODE Processing Pipeline da9328e8e21bde01a0878ae7a0b2af10 https://www.encodeproject.org/files/ENCFF789LYZ/@@download/ENCFF789LYZ.bigWig hg19 released mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read length extremely low read depth ENCFF862BEX bigWig signal p-value ENCSR000EGQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFYB-human ENCAB000AJD DNA see document see document False 2011-10-29 ENCODE 2 ENCFF408YZH, ENCFF679XFJ, ENCFF767RBF 324545404 ENCODE Processing Pipeline 090dff1dde08a19a223ac97dd5fac76e https://www.encodeproject.org/files/ENCFF862BEX/@@download/ENCFF862BEX.bigWig hg19 released mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read length extremely low read depth ENCFF143FUD bigBed narrowPeak peaks ENCSR000EGQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFYB-human ENCAB000AJD DNA see document see document False 2011-10-29 ENCODE 2 ENCFF180NNF 2292966 ENCODE Processing Pipeline e2020fdf656799ede0f8de6d96bd9145 https://www.encodeproject.org/files/ENCFF143FUD/@@download/ENCFF143FUD.bigBed hg19 released mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read length extremely low read depth ENCFF561PGE bed narrowPeak conservative idr thresholded peaks ENCSR000EGQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens NFYB-human ENCAB000AJD DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF001TDO, ENCFF180NNF, ENCFF193FRQ, ENCFF570JVX 153122 ENCODE Processing Pipeline 6971511950353396c05caf809bc2892f https://www.encodeproject.org/files/ENCFF561PGE/@@download/ENCFF561PGE.bed.gz hg19 released mild to moderate bottlenecking, moderate library complexity biological replicates with identical biosample insufficient read length extremely low read depth ENCFF000ZEP bam alignments ENCSR000EVX ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF274-human ENCAB000AMV DNA see document see document False 2011-10-29 ENCODE 1 1 625116843 Peggy Farnham, USC 2f62f1772d67a0e4940c1160c179b944 https://www.encodeproject.org/files/ENCFF000ZEP/@@download/ENCFF000ZEP.bam hg19 archived borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample, missing derived_from ENCFF000ZEQ bam alignments ENCSR000EVX ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF274-human ENCAB000AMV DNA see document see document False 2011-10-29 ENCODE 2 1 435503152 Peggy Farnham, USC 3014134dc01dc23a88bb1133f6fd2181 https://www.encodeproject.org/files/ENCFF000ZEQ/@@download/ENCFF000ZEQ.bam hg19 archived borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample, missing derived_from ENCFF000ZER bigBed narrowPeak peaks ENCSR000EVX ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF274-human ENCAB000AMV DNA see document see document False 2011-10-29 ENCODE ENCFF001VPO 374899 Peggy Farnham, USC 8066e063b29d4e3b756e4656dc26c962 https://www.encodeproject.org/files/ENCFF000ZER/@@download/ENCFF000ZER.bigBed hg19 archived borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample ENCFF000ZES fastq reads ENCSR000EVX ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF274-human ENCAB000AMV DNA see document see document False 2011-10-29 ENCODE 1 1 36 single-ended 1405531985 Peggy Farnham, USC 398f1a4df912aa88bbd8c21900a20da6 https://www.encodeproject.org/files/ENCFF000ZES/@@download/ENCFF000ZES.fastq.gz Illumina Genome Analyzer /files/ENCFF000VEK/ released borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity, inconsistent control read length, low read length biological replicates with identical biosample ENCFF000ZEU fastq reads ENCSR000EVX ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF274-human ENCAB000AMV DNA see document see document False 2011-10-29 ENCODE 2 1 36 single-ended 1196410292 Peggy Farnham, USC 7cec7062be221791a27ec954a8fbbc5a https://www.encodeproject.org/files/ENCFF000ZEU/@@download/ENCFF000ZEU.fastq.gz Illumina Genome Analyzer /files/ENCFF000VEK/ released borderline replicate concordance, low read depth, mild to moderate bottlenecking, moderate library complexity, inconsistent control read length, low read length biological replicates with identical biosample ENCFF000ZEW bigWig signal ENCSR000EVX ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF274-human ENCAB000AMV DNA see document see document False 2011-10-29 ENCODE 354333464 Peggy Farnham, USC 3c6ccf5d5a6504d8c55943abf9abe380 https://www.encodeproject.org/files/ENCFF000ZEW/@@download/ENCFF000ZEW.bigWig hg19 archived borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample, missing derived_from ENCFF001VPO bed narrowPeak peaks ENCSR000EVX ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF274-human ENCAB000AMV DNA see document see document False 2011-10-29 ENCODE 130531 Peggy Farnham, USC 72c40b7f43274ade845df679cb3679b3 https://www.encodeproject.org/files/ENCFF001VPO/@@download/ENCFF001VPO.bed.gz hg19 archived borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample, missing derived_from ENCFF002CYU bed narrowPeak optimal idr thresholded peaks ENCSR000EVX ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF274-human ENCAB000AMV DNA see document see document False 2011-10-29 ENCODE 47845 ENCODE Consortium Analysis Working Group fc3a851a27dfec1fdf9cd1eab0a216e3 https://www.encodeproject.org/files/ENCFF002CYU/@@download/ENCFF002CYU.bed.gz hg19 archived borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample, missing derived_from ENCFF562VDR bigBed narrowPeak optimal idr thresholded peaks ENCSR000EVX ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF274-human ENCAB000AMV DNA see document see document False 2011-10-29 ENCODE ENCFF002CYU 207218 ENCODE Consortium 02f63348a5124fc3cd03486f64382ece https://www.encodeproject.org/files/ENCFF562VDR/@@download/ENCFF562VDR.bigBed hg19 archived borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample ENCFF221SWK bam unfiltered alignments ENCSR000EVX ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF274-human ENCAB000AMV DNA see document see document False 2011-10-29 ENCODE 1 28 ENCFF000ZES, ENCFF807MUK 1318565252 ENCODE Processing Pipeline 799d20a0b4e1a2fbdea813f99c274c24 https://www.encodeproject.org/files/ENCFF221SWK/@@download/ENCFF221SWK.bam hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample ENCFF826BOX bam alignments ENCSR000EVX ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF274-human ENCAB000AMV DNA see document see document False 2011-10-29 ENCODE 1 28 ENCFF000ZES, ENCFF807MUK 565653699 ENCODE Processing Pipeline 9d2c7e6cb607b7ee443d82e07d1c2a1c https://www.encodeproject.org/files/ENCFF826BOX/@@download/ENCFF826BOX.bam hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample ENCFF655JKW bigWig fold change over control ENCSR000EVX ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF274-human ENCAB000AMV DNA see document see document False 2011-10-29 ENCODE 2 ENCFF051ZZR, ENCFF943KAZ 335357626 ENCODE Processing Pipeline a7b5108ed9487059cac79bc8fee670ca https://www.encodeproject.org/files/ENCFF655JKW/@@download/ENCFF655JKW.bigWig hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample ENCFF479ZWB bed narrowPeak peaks ENCSR000EVX ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF274-human ENCAB000AMV DNA see document see document False 2011-10-29 ENCODE 1 ENCFF051ZZR, ENCFF826BOX 5855561 ENCODE Processing Pipeline edd9eb1c92b6ea69c50d79c78e91dcc7 https://www.encodeproject.org/files/ENCFF479ZWB/@@download/ENCFF479ZWB.bed.gz hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample ENCFF854CCF bed narrowPeak peaks ENCSR000EVX ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF274-human ENCAB000AMV DNA see document see document False 2011-10-29 ENCODE 2 ENCFF051ZZR, ENCFF943KAZ 6238769 ENCODE Processing Pipeline 31834bde4e421dc304e7711837e58986 https://www.encodeproject.org/files/ENCFF854CCF/@@download/ENCFF854CCF.bed.gz hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample ENCFF904PBE bed narrowPeak peaks ENCSR000EVX ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF274-human ENCAB000AMV DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF051ZZR, ENCFF826BOX, ENCFF943KAZ 6744439 ENCODE Processing Pipeline ff87019917a4d03f518d2dd9b1b3cf0a https://www.encodeproject.org/files/ENCFF904PBE/@@download/ENCFF904PBE.bed.gz hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample ENCFF720VTB bigWig signal p-value ENCSR000EVX ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF274-human ENCAB000AMV DNA see document see document False 2011-10-29 ENCODE 1 ENCFF051ZZR, ENCFF826BOX 438672965 ENCODE Processing Pipeline 2a8f972587b2e14c451536ca1136b471 https://www.encodeproject.org/files/ENCFF720VTB/@@download/ENCFF720VTB.bigWig hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample ENCFF689FNP bigWig fold change over control ENCSR000EVX ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF274-human ENCAB000AMV DNA see document see document False 2011-10-29 ENCODE 1 ENCFF051ZZR, ENCFF826BOX 421378577 ENCODE Processing Pipeline bb793e72b08d0e3923040d3e4e8a0fa1 https://www.encodeproject.org/files/ENCFF689FNP/@@download/ENCFF689FNP.bigWig hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample ENCFF943KAZ bam alignments ENCSR000EVX ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF274-human ENCAB000AMV DNA see document see document False 2011-10-29 ENCODE 2 28 ENCFF000ZEU, ENCFF807MUK 481195741 ENCODE Processing Pipeline 65a4d40ae36cf536109bb24ac8d4e1d9 https://www.encodeproject.org/files/ENCFF943KAZ/@@download/ENCFF943KAZ.bam hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample ENCFF974NNY bigWig signal p-value ENCSR000EVX ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF274-human ENCAB000AMV DNA see document see document False 2011-10-29 ENCODE 2 ENCFF051ZZR, ENCFF943KAZ 390809247 ENCODE Processing Pipeline 260f5ac0e000e7e6546b0ec341afe4fc https://www.encodeproject.org/files/ENCFF974NNY/@@download/ENCFF974NNY.bigWig hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample ENCFF521HBG bed narrowPeak conservative idr thresholded peaks ENCSR000EVX ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF274-human ENCAB000AMV DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF001TDO, ENCFF479ZWB, ENCFF854CCF, ENCFF904PBE 27409 ENCODE Processing Pipeline 91f643a9a0af56abc568a0d97bc3f7f8 https://www.encodeproject.org/files/ENCFF521HBG/@@download/ENCFF521HBG.bed.gz hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample ENCFF344QKL bed narrowPeak optimal idr thresholded peaks ENCSR000EVX ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF274-human ENCAB000AMV DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF001TDO, ENCFF479ZWB, ENCFF854CCF, ENCFF904PBE 56693 ENCODE Processing Pipeline e1dcb354f98030f0cad5ea10cb6b8428 https://www.encodeproject.org/files/ENCFF344QKL/@@download/ENCFF344QKL.bed.gz hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample ENCFF459GOZ bigBed narrowPeak optimal idr thresholded peaks ENCSR000EVX ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF274-human ENCAB000AMV DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF344QKL 184707 ENCODE Processing Pipeline 9c5bc60b55bb85290be87e2983611bf7 https://www.encodeproject.org/files/ENCFF459GOZ/@@download/ENCFF459GOZ.bigBed hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample ENCFF266CFX bam unfiltered alignments ENCSR000EVX ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF274-human ENCAB000AMV DNA see document see document False 2011-10-29 ENCODE 2 28 ENCFF000ZEU, ENCFF807MUK 1074533470 ENCODE Processing Pipeline b13cc015ee7c44a89842596c3d5e7ba1 https://www.encodeproject.org/files/ENCFF266CFX/@@download/ENCFF266CFX.bam hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample ENCFF524CDL bigWig signal p-value ENCSR000EVX ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF274-human ENCAB000AMV DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF051ZZR, ENCFF826BOX, ENCFF943KAZ 630579408 ENCODE Processing Pipeline d32e9fb2032ee2660bfaf5381f560fc7 https://www.encodeproject.org/files/ENCFF524CDL/@@download/ENCFF524CDL.bigWig hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample ENCFF296ZAW bigWig fold change over control ENCSR000EVX ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF274-human ENCAB000AMV DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF051ZZR, ENCFF826BOX, ENCFF943KAZ 617969898 ENCODE Processing Pipeline 10fd2cd6ba2dff3b2990dcb75ba95ae9 https://www.encodeproject.org/files/ENCFF296ZAW/@@download/ENCFF296ZAW.bigWig hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample ENCFF522AOW bigBed narrowPeak peaks ENCSR000EVX ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF274-human ENCAB000AMV DNA see document see document False 2011-10-29 ENCODE 1 ENCFF479ZWB 13066694 ENCODE Processing Pipeline c65f698c7cb5f89e2d20abb2c10211b8 https://www.encodeproject.org/files/ENCFF522AOW/@@download/ENCFF522AOW.bigBed hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample ENCFF587XIZ bigBed narrowPeak peaks ENCSR000EVX ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF274-human ENCAB000AMV DNA see document see document False 2011-10-29 ENCODE 2 ENCFF854CCF 12858543 ENCODE Processing Pipeline 050cd5182ef55111e5e1654f3be4d72f https://www.encodeproject.org/files/ENCFF587XIZ/@@download/ENCFF587XIZ.bigBed hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample ENCFF429JXG bigBed narrowPeak peaks ENCSR000EVX ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF274-human ENCAB000AMV DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF904PBE 12908081 ENCODE Processing Pipeline 671671e2adc5f5abcfdbf57358484866 https://www.encodeproject.org/files/ENCFF429JXG/@@download/ENCFF429JXG.bigBed hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample ENCFF377DZZ bigBed narrowPeak conservative idr thresholded peaks ENCSR000EVX ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF274-human ENCAB000AMV DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF521HBG 143484 ENCODE Processing Pipeline 2f5af1f3e3c3b7ef53d4f5c1a6a71376 https://www.encodeproject.org/files/ENCFF377DZZ/@@download/ENCFF377DZZ.bigBed hg19 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample ENCFF444ZUH bam alignments ENCSR000EVX ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF274-human ENCAB000AMV DNA see document see document False 2011-10-29 ENCODE 1 28 ENCFF000ZES, ENCFF643CGH 565142937 ENCODE Processing Pipeline baa717f0a126c769bfeb071f462ce0fb https://www.encodeproject.org/files/ENCFF444ZUH/@@download/ENCFF444ZUH.bam GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample ENCFF447NGX bigWig signal p-value ENCSR000EVX ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF274-human ENCAB000AMV DNA see document see document False 2011-10-29 ENCODE 2 ENCFF355SGP, ENCFF474ETY 418742718 ENCODE Processing Pipeline e04c9c7f62d3f55b0cc95d8efeae6add https://www.encodeproject.org/files/ENCFF447NGX/@@download/ENCFF447NGX.bigWig GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample ENCFF478NGK bed narrowPeak peaks ENCSR000EVX ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF274-human ENCAB000AMV DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF355SGP, ENCFF444ZUH, ENCFF474ETY 6745206 ENCODE Processing Pipeline b37f0a6959ccead08a926edb7f87b76d https://www.encodeproject.org/files/ENCFF478NGK/@@download/ENCFF478NGK.bed.gz GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample ENCFF305IES bigBed narrowPeak peaks ENCSR000EVX ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF274-human ENCAB000AMV DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF478NGK 12897892 ENCODE Processing Pipeline 40987de5ea7ff13579009fbd53f898e4 https://www.encodeproject.org/files/ENCFF305IES/@@download/ENCFF305IES.bigBed GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample ENCFF390BXU bed narrowPeak conservative idr thresholded peaks ENCSR000EVX ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF274-human ENCAB000AMV DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF419HQM, ENCFF419RSJ, ENCFF478NGK, ENCFF873RKZ 27631 ENCODE Processing Pipeline 52d886e3f89aa5c369051c116fa4fb54 https://www.encodeproject.org/files/ENCFF390BXU/@@download/ENCFF390BXU.bed.gz GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample ENCFF094LYR bigWig signal p-value ENCSR000EVX ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF274-human ENCAB000AMV DNA see document see document False 2011-10-29 ENCODE 1 ENCFF355SGP, ENCFF444ZUH 474809569 ENCODE Processing Pipeline 685ab0f2a5923db8fa5adf59b8fe3844 https://www.encodeproject.org/files/ENCFF094LYR/@@download/ENCFF094LYR.bigWig GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample ENCFF986CZI bigWig fold change over control ENCSR000EVX ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF274-human ENCAB000AMV DNA see document see document False 2011-10-29 ENCODE 1 ENCFF355SGP, ENCFF444ZUH 416287979 ENCODE Processing Pipeline 592865a198706b9f07fde3d29e97554d https://www.encodeproject.org/files/ENCFF986CZI/@@download/ENCFF986CZI.bigWig GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample ENCFF788ZTU bigWig signal p-value ENCSR000EVX ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF274-human ENCAB000AMV DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF355SGP, ENCFF444ZUH, ENCFF474ETY 629890679 ENCODE Processing Pipeline a096fe8e4b8e962bde65b58a29a1843d https://www.encodeproject.org/files/ENCFF788ZTU/@@download/ENCFF788ZTU.bigWig GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample ENCFF587ARB bam unfiltered alignments ENCSR000EVX ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF274-human ENCAB000AMV DNA see document see document False 2011-10-29 ENCODE 2 28 ENCFF000ZEU, ENCFF643CGH 1077521445 ENCODE Processing Pipeline 83c287dc8f7635a5f52f09e15b5bb45e https://www.encodeproject.org/files/ENCFF587ARB/@@download/ENCFF587ARB.bam GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample ENCFF568ZAY bam unfiltered alignments ENCSR000EVX ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF274-human ENCAB000AMV DNA see document see document False 2011-10-29 ENCODE 1 28 ENCFF000ZES, ENCFF643CGH 1323400489 ENCODE Processing Pipeline 5baaa1f541cfa54b8a0ef57d3e134ca0 https://www.encodeproject.org/files/ENCFF568ZAY/@@download/ENCFF568ZAY.bam GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample ENCFF474ETY bam alignments ENCSR000EVX ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF274-human ENCAB000AMV DNA see document see document False 2011-10-29 ENCODE 2 28 ENCFF000ZEU, ENCFF643CGH 480629115 ENCODE Processing Pipeline 046ba9a822d5f314b97558b59c274cc3 https://www.encodeproject.org/files/ENCFF474ETY/@@download/ENCFF474ETY.bam GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample ENCFF022AHF bigWig fold change over control ENCSR000EVX ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF274-human ENCAB000AMV DNA see document see document False 2011-10-29 ENCODE 2 ENCFF355SGP, ENCFF474ETY 332469083 ENCODE Processing Pipeline 2d8a5133847f1c825a8a7cebac6b89e5 https://www.encodeproject.org/files/ENCFF022AHF/@@download/ENCFF022AHF.bigWig GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample ENCFF767MPH bigWig fold change over control ENCSR000EVX ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF274-human ENCAB000AMV DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF355SGP, ENCFF444ZUH, ENCFF474ETY 605247789 ENCODE Processing Pipeline 559fc8f933b67c95dde60c4e343e1f1e https://www.encodeproject.org/files/ENCFF767MPH/@@download/ENCFF767MPH.bigWig GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample ENCFF221SVP bigBed narrowPeak peaks ENCSR000EVX ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF274-human ENCAB000AMV DNA see document see document False 2011-10-29 ENCODE 1 ENCFF419HQM 13071409 ENCODE Processing Pipeline 2b4caeb40d90456e355a7cf92f2b0b53 https://www.encodeproject.org/files/ENCFF221SVP/@@download/ENCFF221SVP.bigBed GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample ENCFF087MFW bigBed narrowPeak peaks ENCSR000EVX ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF274-human ENCAB000AMV DNA see document see document False 2011-10-29 ENCODE 2 ENCFF873RKZ 12860851 ENCODE Processing Pipeline e33f6610b7a74ee84a1e815facc7bf5a https://www.encodeproject.org/files/ENCFF087MFW/@@download/ENCFF087MFW.bigBed GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample ENCFF051AVQ bigBed narrowPeak optimal idr thresholded peaks ENCSR000EVX ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF274-human ENCAB000AMV DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF498VQZ 185230 ENCODE Processing Pipeline 8efe077ebb004c7103fc0543e4bd67e2 https://www.encodeproject.org/files/ENCFF051AVQ/@@download/ENCFF051AVQ.bigBed GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample ENCFF873RKZ bed narrowPeak peaks ENCSR000EVX ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF274-human ENCAB000AMV DNA see document see document False 2011-10-29 ENCODE 2 ENCFF355SGP, ENCFF474ETY 6239690 ENCODE Processing Pipeline 41d6268be360c8888da536d9ddf0f0d9 https://www.encodeproject.org/files/ENCFF873RKZ/@@download/ENCFF873RKZ.bed.gz GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample ENCFF558APS bigBed narrowPeak conservative idr thresholded peaks ENCSR000EVX ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF274-human ENCAB000AMV DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF390BXU 144708 ENCODE Processing Pipeline 505dba2aa832afc006cb0bd814cf3f03 https://www.encodeproject.org/files/ENCFF558APS/@@download/ENCFF558APS.bigBed GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample ENCFF498VQZ bed narrowPeak optimal idr thresholded peaks ENCSR000EVX ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF274-human ENCAB000AMV DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF419HQM, ENCFF419RSJ, ENCFF478NGK, ENCFF873RKZ 56127 ENCODE Processing Pipeline eea2b83acf541e36d2707bc9f0075ad0 https://www.encodeproject.org/files/ENCFF498VQZ/@@download/ENCFF498VQZ.bed.gz GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample ENCFF419HQM bed narrowPeak peaks ENCSR000EVX ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF274-human ENCAB000AMV DNA see document see document False 2011-10-29 ENCODE 1 ENCFF355SGP, ENCFF444ZUH 5863112 ENCODE Processing Pipeline 8e9ed1068975902c98442cff532e21fb https://www.encodeproject.org/files/ENCFF419HQM/@@download/ENCFF419HQM.bed.gz GRCh38 released borderline replicate concordance, low read depth, mild to moderate bottlenecking, low read length, moderate library complexity biological replicates with identical biosample ENCFF000ZCB bam alignments ENCSR000EWH ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2C2-human ENCAB000AMA DNA see document see document False 2011-10-29 ENCODE 1 ENCFF000ZCP 491193781 Peggy Farnham, USC 4392262c7850b2b8ab020782f78a1aec https://www.encodeproject.org/files/ENCFF000ZCB/@@download/ENCFF000ZCB.bam hg19 archived biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF000ZCC bam alignments ENCSR000EWH ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2C2-human ENCAB000AMA DNA see document see document False 2011-10-29 ENCODE 2 ENCFF000ZDC 621445492 Peggy Farnham, USC 43cfb5dcddf113bf18d4d40eb036e95f https://www.encodeproject.org/files/ENCFF000ZCC/@@download/ENCFF000ZCC.bam hg19 archived biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF000ZCD bigBed narrowPeak peaks ENCSR000EWH ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2C2-human ENCAB000AMA DNA see document see document False 2011-10-29 ENCODE ENCFF001VPE 102317 Peggy Farnham, USC 2e3381f6ab48a7e40c97ca7399b43e3c https://www.encodeproject.org/files/ENCFF000ZCD/@@download/ENCFF000ZCD.bigBed hg19 archived biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF000ZCE bigWig signal ENCSR000EWH ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2C2-human ENCAB000AMA DNA see document see document False 2011-10-29 ENCODE 330506045 Peggy Farnham, USC 35f7060dede50924224d03691574ae2d https://www.encodeproject.org/files/ENCFF000ZCE/@@download/ENCFF000ZCE.bigWig hg19 archived biological replicates with identical biosample, missing derived_from insufficient read length, insufficient read depth ENCFF000ZCP fastq reads ENCSR000EWH ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2C2-human ENCAB000AMA DNA see document see document False 2011-10-29 ENCODE 1 1 32 single-ended 377585977 Peggy Farnham, USC 6c3f75ff2dbf173f64a5ee9f8efd5aa0 https://www.encodeproject.org/files/ENCFF000ZCP/@@download/ENCFF000ZCP.fastq.gz Illumina Genome Analyzer /files/ENCFF000VEK/ released inconsistent control read length biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF000ZDC fastq reads ENCSR000EWH ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2C2-human ENCAB000AMA DNA see document see document False 2011-10-29 ENCODE 2 1 32 single-ended 487182554 Peggy Farnham, USC 8d9de23593dee93a54874668428a7f37 https://www.encodeproject.org/files/ENCFF000ZDC/@@download/ENCFF000ZDC.fastq.gz Illumina Genome Analyzer /files/ENCFF000VEK/ released inconsistent control read length biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF001VPE bed narrowPeak peaks ENCSR000EWH ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2C2-human ENCAB000AMA DNA see document see document False 2011-10-29 ENCODE 9304 Peggy Farnham, USC d77f4e16aa46dd3955b05e97b773c8d5 https://www.encodeproject.org/files/ENCFF001VPE/@@download/ENCFF001VPE.bed.gz hg19 archived biological replicates with identical biosample, missing derived_from insufficient read length, insufficient read depth ENCFF002CYM bed narrowPeak optimal idr thresholded peaks ENCSR000EWH ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2C2-human ENCAB000AMA DNA see document see document False 2011-10-29 ENCODE 15862 ENCODE Consortium Analysis Working Group 60ccba98270606ef6d27ffb5aff33ce6 https://www.encodeproject.org/files/ENCFF002CYM/@@download/ENCFF002CYM.bed.gz hg19 archived biological replicates with identical biosample, missing derived_from insufficient read length, insufficient read depth ENCFF157YGH bigBed narrowPeak optimal idr thresholded peaks ENCSR000EWH ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2C2-human ENCAB000AMA DNA see document see document False 2011-10-29 ENCODE ENCFF002CYM 127846 ENCODE Consortium 406286d5ee7c608d6052c87551e903ab https://www.encodeproject.org/files/ENCFF157YGH/@@download/ENCFF157YGH.bigBed hg19 archived biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF771NSF bam alignments ENCSR000EWH ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2C2-human ENCAB000AMA DNA see document see document False 2011-10-29 ENCODE 2 32 ENCFF000ZDC, ENCFF643CGH 276186923 ENCODE Processing Pipeline 7101ac688edca5349b6ca3cd98d035fc https://www.encodeproject.org/files/ENCFF771NSF/@@download/ENCFF771NSF.bam GRCh38 released biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF836CBA bigBed narrowPeak peaks ENCSR000EWH ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2C2-human ENCAB000AMA DNA see document see document False 2011-10-29 ENCODE 1 ENCFF138LHR 4028189 ENCODE Processing Pipeline 1168de6ea55376bfd4e96fb8610d0b3c https://www.encodeproject.org/files/ENCFF836CBA/@@download/ENCFF836CBA.bigBed GRCh38 released biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF914QSN bed narrowPeak conservative idr thresholded peaks ENCSR000EWH ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2C2-human ENCAB000AMA DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF138LHR, ENCFF159OAW, ENCFF419RSJ, ENCFF430YGK 10512 ENCODE Processing Pipeline c4cab48a77ea7400e5c310736feda32b https://www.encodeproject.org/files/ENCFF914QSN/@@download/ENCFF914QSN.bed.gz GRCh38 released biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF048YNL bigBed narrowPeak conservative idr thresholded peaks ENCSR000EWH ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2C2-human ENCAB000AMA DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF914QSN 63255 ENCODE Processing Pipeline 02da6600e6c3c1e8368086d608199351 https://www.encodeproject.org/files/ENCFF048YNL/@@download/ENCFF048YNL.bigBed GRCh38 released biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF955CIQ bam unfiltered alignments ENCSR000EWH ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2C2-human ENCAB000AMA DNA see document see document False 2011-10-29 ENCODE 2 32 ENCFF000ZDC, ENCFF643CGH 624504813 ENCODE Processing Pipeline 6f36331b3d89f6763ae06f5305acdaff https://www.encodeproject.org/files/ENCFF955CIQ/@@download/ENCFF955CIQ.bam GRCh38 released biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF169IGD bam unfiltered alignments ENCSR000EWH ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2C2-human ENCAB000AMA DNA see document see document False 2011-10-29 ENCODE 1 32 ENCFF000ZCP, ENCFF643CGH 493416394 ENCODE Processing Pipeline d6153c9519719413bd48d83eafdf3003 https://www.encodeproject.org/files/ENCFF169IGD/@@download/ENCFF169IGD.bam GRCh38 released biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF078BWN bam alignments ENCSR000EWH ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2C2-human ENCAB000AMA DNA see document see document False 2011-10-29 ENCODE 1 32 ENCFF000ZCP, ENCFF643CGH 239450590 ENCODE Processing Pipeline 701a81562fdb64bdf083a38fa9d08777 https://www.encodeproject.org/files/ENCFF078BWN/@@download/ENCFF078BWN.bam GRCh38 released biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF190EUO bigWig signal p-value ENCSR000EWH ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2C2-human ENCAB000AMA DNA see document see document False 2011-10-29 ENCODE 1 ENCFF078BWN, ENCFF355SGP 402045125 ENCODE Processing Pipeline e800af5993d99b93d19b16d7ade07307 https://www.encodeproject.org/files/ENCFF190EUO/@@download/ENCFF190EUO.bigWig GRCh38 released biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF718PRW bigWig fold change over control ENCSR000EWH ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2C2-human ENCAB000AMA DNA see document see document False 2011-10-29 ENCODE 1 ENCFF078BWN, ENCFF355SGP 164552980 ENCODE Processing Pipeline 83d5da3c9d838d1e10efd98eb79765f4 https://www.encodeproject.org/files/ENCFF718PRW/@@download/ENCFF718PRW.bigWig GRCh38 released biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF159OAW bed narrowPeak peaks ENCSR000EWH ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2C2-human ENCAB000AMA DNA see document see document False 2011-10-29 ENCODE 2 ENCFF355SGP, ENCFF771NSF 2585711 ENCODE Processing Pipeline df28e61422fb6d868113790c8cb29777 https://www.encodeproject.org/files/ENCFF159OAW/@@download/ENCFF159OAW.bed.gz GRCh38 released biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF430YGK bed narrowPeak peaks ENCSR000EWH ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2C2-human ENCAB000AMA DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF078BWN, ENCFF355SGP, ENCFF771NSF 4295731 ENCODE Processing Pipeline 3e8b8deb2340ca0dfbbc0b36bed49b62 https://www.encodeproject.org/files/ENCFF430YGK/@@download/ENCFF430YGK.bed.gz GRCh38 released biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF188DNO bigWig signal p-value ENCSR000EWH ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2C2-human ENCAB000AMA DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF078BWN, ENCFF355SGP, ENCFF771NSF 425534308 ENCODE Processing Pipeline 429b1ea30a2852239589e2b97d8d6b43 https://www.encodeproject.org/files/ENCFF188DNO/@@download/ENCFF188DNO.bigWig GRCh38 released biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF316NLV bigWig fold change over control ENCSR000EWH ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2C2-human ENCAB000AMA DNA see document see document False 2011-10-29 ENCODE 2 ENCFF355SGP, ENCFF771NSF 177543303 ENCODE Processing Pipeline f61530c7a8a48e42df582b5f9e50aa6c https://www.encodeproject.org/files/ENCFF316NLV/@@download/ENCFF316NLV.bigWig GRCh38 released biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF893JAF bigWig fold change over control ENCSR000EWH ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2C2-human ENCAB000AMA DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF078BWN, ENCFF355SGP, ENCFF771NSF 308438163 ENCODE Processing Pipeline 624231284bfdb622fee8fb672cb25b98 https://www.encodeproject.org/files/ENCFF893JAF/@@download/ENCFF893JAF.bigWig GRCh38 released biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF527VPC bigBed narrowPeak peaks ENCSR000EWH ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2C2-human ENCAB000AMA DNA see document see document False 2011-10-29 ENCODE 2 ENCFF159OAW 5488015 ENCODE Processing Pipeline d667f5659e68510a23ca297fbd2ecd8c https://www.encodeproject.org/files/ENCFF527VPC/@@download/ENCFF527VPC.bigBed GRCh38 released biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF658YZW bigBed narrowPeak peaks ENCSR000EWH ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2C2-human ENCAB000AMA DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF430YGK 10687369 ENCODE Processing Pipeline 26ace7b8b39609b115b50f424f4ede54 https://www.encodeproject.org/files/ENCFF658YZW/@@download/ENCFF658YZW.bigBed GRCh38 released biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF791ZPU bed narrowPeak optimal idr thresholded peaks ENCSR000EWH ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2C2-human ENCAB000AMA DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF138LHR, ENCFF159OAW, ENCFF419RSJ, ENCFF430YGK 10865 ENCODE Processing Pipeline 2c06d5202c81ec20cb1b5e46ae39d730 https://www.encodeproject.org/files/ENCFF791ZPU/@@download/ENCFF791ZPU.bed.gz GRCh38 released biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF419MGD bigBed narrowPeak optimal idr thresholded peaks ENCSR000EWH ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2C2-human ENCAB000AMA DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF791ZPU 64003 ENCODE Processing Pipeline 7eb6bc4e71c5e46d859f401cdcb1b886 https://www.encodeproject.org/files/ENCFF419MGD/@@download/ENCFF419MGD.bigBed GRCh38 released biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF182QQL bigWig signal p-value ENCSR000EWH ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2C2-human ENCAB000AMA DNA see document see document False 2011-10-29 ENCODE 2 ENCFF355SGP, ENCFF771NSF 410624541 ENCODE Processing Pipeline f25eeed1bbd8a55c65b82a50cee951f5 https://www.encodeproject.org/files/ENCFF182QQL/@@download/ENCFF182QQL.bigWig GRCh38 released biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF138LHR bed narrowPeak peaks ENCSR000EWH ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2C2-human ENCAB000AMA DNA see document see document False 2011-10-29 ENCODE 1 ENCFF078BWN, ENCFF355SGP 1792003 ENCODE Processing Pipeline 1bfca16ba2cbb0b0b7504dfbcf6046a6 https://www.encodeproject.org/files/ENCFF138LHR/@@download/ENCFF138LHR.bed.gz GRCh38 released biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF205OOU bam alignments ENCSR000EWH ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2C2-human ENCAB000AMA DNA see document see document False 2011-10-29 ENCODE 2 32 ENCFF000ZDC, ENCFF807MUK 276428613 ENCODE Processing Pipeline 0826876933f2a6d5831c62e5a880592d https://www.encodeproject.org/files/ENCFF205OOU/@@download/ENCFF205OOU.bam hg19 released biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF803BPM bigWig signal p-value ENCSR000EWH ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2C2-human ENCAB000AMA DNA see document see document False 2011-10-29 ENCODE 2 ENCFF051ZZR, ENCFF205OOU 339686008 ENCODE Processing Pipeline 160d2b80f0b7ce3b7d549ac858e616a6 https://www.encodeproject.org/files/ENCFF803BPM/@@download/ENCFF803BPM.bigWig hg19 released biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF925UIZ bam unfiltered alignments ENCSR000EWH ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2C2-human ENCAB000AMA DNA see document see document False 2011-10-29 ENCODE 2 32 ENCFF000ZDC, ENCFF807MUK 622359755 ENCODE Processing Pipeline 55a5550b7b560f5fc8d7a951413ffc43 https://www.encodeproject.org/files/ENCFF925UIZ/@@download/ENCFF925UIZ.bam hg19 released biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF589YXX bam unfiltered alignments ENCSR000EWH ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2C2-human ENCAB000AMA DNA see document see document False 2011-10-29 ENCODE 1 32 ENCFF000ZCP, ENCFF807MUK 491839879 ENCODE Processing Pipeline ef6a082af72748322bc3cc806865783d https://www.encodeproject.org/files/ENCFF589YXX/@@download/ENCFF589YXX.bam hg19 released biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF396QHD bam alignments ENCSR000EWH ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2C2-human ENCAB000AMA DNA see document see document False 2011-10-29 ENCODE 1 32 ENCFF000ZCP, ENCFF807MUK 239650181 ENCODE Processing Pipeline 114105c7389071e71379f5728d9e1489 https://www.encodeproject.org/files/ENCFF396QHD/@@download/ENCFF396QHD.bam hg19 released biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF369MDA bigWig signal p-value ENCSR000EWH ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2C2-human ENCAB000AMA DNA see document see document False 2011-10-29 ENCODE 1 ENCFF051ZZR, ENCFF396QHD 399427952 ENCODE Processing Pipeline 1365cec7973c7a465c3c70aa276c5d6d https://www.encodeproject.org/files/ENCFF369MDA/@@download/ENCFF369MDA.bigWig hg19 released biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF660ATE bigWig fold change over control ENCSR000EWH ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2C2-human ENCAB000AMA DNA see document see document False 2011-10-29 ENCODE 2 ENCFF051ZZR, ENCFF205OOU 179666149 ENCODE Processing Pipeline 16b29eb59b53778ee9f4e02039cd941c https://www.encodeproject.org/files/ENCFF660ATE/@@download/ENCFF660ATE.bigWig hg19 released biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF342EJU bed narrowPeak peaks ENCSR000EWH ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2C2-human ENCAB000AMA DNA see document see document False 2011-10-29 ENCODE 1 ENCFF051ZZR, ENCFF396QHD 1846008 ENCODE Processing Pipeline 2204adb7de4c87af2ca746cd3217546a https://www.encodeproject.org/files/ENCFF342EJU/@@download/ENCFF342EJU.bed.gz hg19 released biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF883FFE bigBed narrowPeak peaks ENCSR000EWH ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2C2-human ENCAB000AMA DNA see document see document False 2011-10-29 ENCODE 1 ENCFF342EJU 4022383 ENCODE Processing Pipeline 47bcc7fe00fa1450de796435662b4cb8 https://www.encodeproject.org/files/ENCFF883FFE/@@download/ENCFF883FFE.bigBed hg19 released biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF230UMV bigBed narrowPeak conservative idr thresholded peaks ENCSR000EWH ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2C2-human ENCAB000AMA DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF541SHT 63248 ENCODE Processing Pipeline 065a1b4aea2bc2a33d790be0399dbe35 https://www.encodeproject.org/files/ENCFF230UMV/@@download/ENCFF230UMV.bigBed hg19 released biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF594LCH bed narrowPeak optimal idr thresholded peaks ENCSR000EWH ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2C2-human ENCAB000AMA DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF001TDO, ENCFF342EJU, ENCFF837CQV, ENCFF841ZNM 11703 ENCODE Processing Pipeline b644a99d8801abfd2155e186effd31ba https://www.encodeproject.org/files/ENCFF594LCH/@@download/ENCFF594LCH.bed.gz hg19 released biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF904KAX bigWig signal p-value ENCSR000EWH ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2C2-human ENCAB000AMA DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF051ZZR, ENCFF205OOU, ENCFF396QHD 410695310 ENCODE Processing Pipeline 0257ab3a48d6fc325353bce4ee4c8a8b https://www.encodeproject.org/files/ENCFF904KAX/@@download/ENCFF904KAX.bigWig hg19 released biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF111SYN bigWig fold change over control ENCSR000EWH ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2C2-human ENCAB000AMA DNA see document see document False 2011-10-29 ENCODE 1 ENCFF051ZZR, ENCFF396QHD 171759997 ENCODE Processing Pipeline a4937ef2e7053346c93a54929f32b376 https://www.encodeproject.org/files/ENCFF111SYN/@@download/ENCFF111SYN.bigWig hg19 released biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF837CQV bed narrowPeak peaks ENCSR000EWH ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2C2-human ENCAB000AMA DNA see document see document False 2011-10-29 ENCODE 2 ENCFF051ZZR, ENCFF205OOU 2577171 ENCODE Processing Pipeline 22d2b8db8c9b6fb4ede4fec6f30d96fd https://www.encodeproject.org/files/ENCFF837CQV/@@download/ENCFF837CQV.bed.gz hg19 released biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF573HAI bigWig fold change over control ENCSR000EWH ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2C2-human ENCAB000AMA DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF051ZZR, ENCFF205OOU, ENCFF396QHD 321925583 ENCODE Processing Pipeline c0db841ca852260b2885de1fb7ddd8b5 https://www.encodeproject.org/files/ENCFF573HAI/@@download/ENCFF573HAI.bigWig hg19 released biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF841ZNM bed narrowPeak peaks ENCSR000EWH ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2C2-human ENCAB000AMA DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF051ZZR, ENCFF205OOU, ENCFF396QHD 4367294 ENCODE Processing Pipeline 2908d011585f5d2341ef66972d32ad91 https://www.encodeproject.org/files/ENCFF841ZNM/@@download/ENCFF841ZNM.bed.gz hg19 released biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF704ZUN bigBed narrowPeak peaks ENCSR000EWH ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2C2-human ENCAB000AMA DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF841ZNM 10728547 ENCODE Processing Pipeline e8fd7f1f763d59fdb62b8647ae19217f https://www.encodeproject.org/files/ENCFF704ZUN/@@download/ENCFF704ZUN.bigBed hg19 released biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF614DHJ bigBed narrowPeak optimal idr thresholded peaks ENCSR000EWH ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2C2-human ENCAB000AMA DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF594LCH 63944 ENCODE Processing Pipeline 9c42e1dd0c97f98c6f487c35d9a4b939 https://www.encodeproject.org/files/ENCFF614DHJ/@@download/ENCFF614DHJ.bigBed hg19 released biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF733OGJ bigBed narrowPeak peaks ENCSR000EWH ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2C2-human ENCAB000AMA DNA see document see document False 2011-10-29 ENCODE 2 ENCFF837CQV 6716654 ENCODE Processing Pipeline 2888e84bb0b0d67338793a752d37574c https://www.encodeproject.org/files/ENCFF733OGJ/@@download/ENCFF733OGJ.bigBed hg19 released biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF541SHT bed narrowPeak conservative idr thresholded peaks ENCSR000EWH ChIP-seq EFO:0002067 K562 cell line Homo sapiens NR2C2-human ENCAB000AMA DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF001TDO, ENCFF342EJU, ENCFF837CQV, ENCFF841ZNM 11181 ENCODE Processing Pipeline 5f0a343e53553ea4b02ff5f49ed75845 https://www.encodeproject.org/files/ENCFF541SHT/@@download/ENCFF541SHT.bed.gz hg19 released biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF000QFT bam alignments ENCSR000BGX ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIX5-human ENCAB000AKV DNA see document see document False 2011-07-18 ENCODE 1 ENCFF000QGG 214420360 Richard Myers, HAIB e07047a1d59e1463d5b82912d6165396 https://www.encodeproject.org/files/ENCFF000QFT/@@download/ENCFF000QFT.bam hg19 released low read length biological replicates with identical biosample ENCFF000QFU bam alignments ENCSR000BGX ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIX5-human ENCAB000AKV DNA see document see document False 2011-07-18 ENCODE 2 ENCFF000QGJ 853132699 Richard Myers, HAIB 62e1c343f3038cca2157b09042cfdc79 https://www.encodeproject.org/files/ENCFF000QFU/@@download/ENCFF000QFU.bam hg19 released low read length biological replicates with identical biosample ENCFF000QFV bigBed broadPeak peaks ENCSR000BGX ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIX5-human ENCAB000AKV DNA see document see document False 2011-07-18 ENCODE 1 1 ENCFF001ULB 337186 Richard Myers, HAIB b4650321859b7995da620042e9ad868b https://www.encodeproject.org/files/ENCFF000QFV/@@download/ENCFF000QFV.bigBed hg19 released low read length biological replicates with identical biosample ENCFF000QFW bigBed broadPeak peaks ENCSR000BGX ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIX5-human ENCAB000AKV DNA see document see document False 2011-07-18 ENCODE 2 1 ENCFF001ULC 368473 Richard Myers, HAIB e177725406127a3a50ca5433946aa18d https://www.encodeproject.org/files/ENCFF000QFW/@@download/ENCFF000QFW.bigBed hg19 released low read length biological replicates with identical biosample ENCFF000QFX bigWig raw signal ENCSR000BGX ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIX5-human ENCAB000AKV DNA see document see document False 2011-07-18 ENCODE 1 1 12589703 Richard Myers, HAIB 9f3c82f081a8758297a19e8671feda1c https://www.encodeproject.org/files/ENCFF000QFX/@@download/ENCFF000QFX.bigWig hg19 released low read length biological replicates with identical biosample, missing derived_from ENCFF000QFZ bigWig raw signal ENCSR000BGX ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIX5-human ENCAB000AKV DNA see document see document False 2011-07-18 ENCODE 2 1 12121258 Richard Myers, HAIB b763b2e94fab9123318c98978efa2698 https://www.encodeproject.org/files/ENCFF000QFZ/@@download/ENCFF000QFZ.bigWig hg19 released low read length biological replicates with identical biosample, missing derived_from ENCFF000QGG fastq reads ENCSR000BGX ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIX5-human ENCAB000AKV DNA see document see document False 2011-07-18 ENCODE 1 1 36 single-ended 919563616 Richard Myers, HAIB 27b3ed7f6b397ca75c6627b5979fc9da https://www.encodeproject.org/files/ENCFF000QGG/@@download/ENCFF000QGG.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000QFS/ released inconsistent control read length, low read length biological replicates with identical biosample, mismatched status ENCFF000QGJ fastq reads ENCSR000BGX ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIX5-human ENCAB000AKV DNA see document see document False 2011-07-18 ENCODE 2 1 36 single-ended 923652399 Richard Myers, HAIB 7b8a52426a0d7f6c75d2404b88327942 https://www.encodeproject.org/files/ENCFF000QGJ/@@download/ENCFF000QGJ.fastq.gz Illumina Genome Analyzer IIx /files/ENCFF000QFL/ released low read length biological replicates with identical biosample ENCFF001ULB bed broadPeak peaks ENCSR000BGX ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIX5-human ENCAB000AKV DNA see document see document False 2011-07-18 ENCODE 1 1 156027 Richard Myers, HAIB 4fcd396a1d5466ba5215c6e26e0025d4 https://www.encodeproject.org/files/ENCFF001ULB/@@download/ENCFF001ULB.bed.gz hg19 released low read length biological replicates with identical biosample, missing derived_from ENCFF001ULC bed broadPeak peaks ENCSR000BGX ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIX5-human ENCAB000AKV DNA see document see document False 2011-07-18 ENCODE 2 1 175557 Richard Myers, HAIB 9da090750fbd5f57a93b70559a0b6ac5 https://www.encodeproject.org/files/ENCFF001ULC/@@download/ENCFF001ULC.bed.gz hg19 released low read length biological replicates with identical biosample, missing derived_from ENCFF002CMM bed narrowPeak optimal idr thresholded peaks ENCSR000BGX ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIX5-human ENCAB000AKV DNA see document see document False 2011-07-18 ENCODE 94185 ENCODE Consortium Analysis Working Group 1f0494497f4bf36bc3b8cda4c0c37dde https://www.encodeproject.org/files/ENCFF002CMM/@@download/ENCFF002CMM.bed.gz hg19 released low read length biological replicates with identical biosample, missing derived_from ENCFF974QTM bigBed narrowPeak optimal idr thresholded peaks ENCSR000BGX ChIP-seq EFO:0002067 K562 cell line Homo sapiens SIX5-human ENCAB000AKV DNA see document see document False 2011-07-18 ENCODE ENCFF002CMM 263878 ENCODE Consortium ea0f4ff141568430736565a350994aaf https://www.encodeproject.org/files/ENCFF974QTM/@@download/ENCFF974QTM.bigBed hg19 released low read length biological replicates with identical biosample ENCFF000ZEL bam alignments ENCSR000EWE ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF274-human ENCAB000AMU DNA see document see document False 2011-10-29 ENCODE 1 ENCFF000ZFI 972278544 Peggy Farnham, USC 310b0f930469fdd5d8a8fbddf64ebe73 https://www.encodeproject.org/files/ENCFF000ZEL/@@download/ENCFF000ZEL.bam hg19 archived biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF000ZEM bam alignments ENCSR000EWE ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF274-human ENCAB000AMU DNA see document see document False 2011-10-29 ENCODE 2 ENCFF000ZFH 1697740328 Peggy Farnham, USC 3696b30baaf0f782fa7558880ce75378 https://www.encodeproject.org/files/ENCFF000ZEM/@@download/ENCFF000ZEM.bam hg19 archived biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF000ZEN bigBed narrowPeak peaks ENCSR000EWE ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF274-human ENCAB000AMU DNA see document see document False 2011-10-29 ENCODE ENCFF001VPN 90508 Peggy Farnham, USC 3159344ee56a1981e486058c97145421 https://www.encodeproject.org/files/ENCFF000ZEN/@@download/ENCFF000ZEN.bigBed hg19 archived biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF000ZEO bigWig signal ENCSR000EWE ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF274-human ENCAB000AMU DNA see document see document False 2011-10-29 ENCODE 380991206 Peggy Farnham, USC 57d54a89d49fdeb9a1bbd964b000bb3e https://www.encodeproject.org/files/ENCFF000ZEO/@@download/ENCFF000ZEO.bigWig hg19 archived biological replicates with identical biosample, missing derived_from insufficient read length, insufficient read depth ENCFF000ZFH fastq reads ENCSR000EWE ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF274-human ENCAB000AMU DNA see document see document False 2011-10-29 ENCODE 2 1 32 single-ended 1501424018 Peggy Farnham, USC fe865fa0e8402fd848f42ac0ded22924 https://www.encodeproject.org/files/ENCFF000ZFH/@@download/ENCFF000ZFH.fastq.gz Illumina Genome Analyzer /files/ENCFF000VEK/ released inconsistent control read length biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF000ZFI fastq reads ENCSR000EWE ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF274-human ENCAB000AMU DNA see document see document False 2011-10-29 ENCODE 1 1 32 single-ended 836311840 Peggy Farnham, USC 91d4d000285c36b4181a18be68e43648 https://www.encodeproject.org/files/ENCFF000ZFI/@@download/ENCFF000ZFI.fastq.gz Illumina Genome Analyzer /files/ENCFF000VEK/ released inconsistent control read length biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF001VPN bed narrowPeak peaks ENCSR000EWE ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF274-human ENCAB000AMU DNA see document see document False 2011-10-29 ENCODE 6987 Peggy Farnham, USC 486d091c324ba33cf3e46740180ccdf7 https://www.encodeproject.org/files/ENCFF001VPN/@@download/ENCFF001VPN.bed.gz hg19 archived biological replicates with identical biosample, missing derived_from insufficient read length, insufficient read depth ENCFF002CYT bed narrowPeak optimal idr thresholded peaks ENCSR000EWE ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF274-human ENCAB000AMU DNA see document see document False 2011-10-29 ENCODE 7610 ENCODE Consortium Analysis Working Group b832826c9a2c89cd02efba3c468be676 https://www.encodeproject.org/files/ENCFF002CYT/@@download/ENCFF002CYT.bed.gz hg19 archived biological replicates with identical biosample, missing derived_from insufficient read length, insufficient read depth ENCFF707QFO bigBed narrowPeak optimal idr thresholded peaks ENCSR000EWE ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF274-human ENCAB000AMU DNA see document see document False 2011-10-29 ENCODE ENCFF002CYT 96559 ENCODE Consortium c8f31bd9b54f2eb5bca1960b882bc95d https://www.encodeproject.org/files/ENCFF707QFO/@@download/ENCFF707QFO.bigBed hg19 archived biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF917UQJ bam alignments ENCSR000EWE ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF274-human ENCAB000AMU DNA see document see document False 2011-10-29 ENCODE 2 32 ENCFF000ZFH, ENCFF643CGH 453141892 ENCODE Processing Pipeline 391aa1fdaf66705873809b60ee1ff28e https://www.encodeproject.org/files/ENCFF917UQJ/@@download/ENCFF917UQJ.bam GRCh38 released biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF255DRN bigWig signal p-value ENCSR000EWE ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF274-human ENCAB000AMU DNA see document see document False 2011-10-29 ENCODE 1 ENCFF355SGP, ENCFF419SAY 347268237 ENCODE Processing Pipeline 3c466b2f3167662b5d920c4f91647143 https://www.encodeproject.org/files/ENCFF255DRN/@@download/ENCFF255DRN.bigWig GRCh38 released biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF212PHZ bigWig signal p-value ENCSR000EWE ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF274-human ENCAB000AMU DNA see document see document False 2011-10-29 ENCODE 2 ENCFF355SGP, ENCFF917UQJ 403118368 ENCODE Processing Pipeline d230ff59a893addb2a2d3e29f8726f24 https://www.encodeproject.org/files/ENCFF212PHZ/@@download/ENCFF212PHZ.bigWig GRCh38 released biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF781AEU bigBed narrowPeak peaks ENCSR000EWE ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF274-human ENCAB000AMU DNA see document see document False 2011-10-29 ENCODE 1 ENCFF107VAF 8971658 ENCODE Processing Pipeline dd3b83df090ed21b21ec44bf34e19513 https://www.encodeproject.org/files/ENCFF781AEU/@@download/ENCFF781AEU.bigBed GRCh38 released biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF013QRM bigBed narrowPeak optimal idr thresholded peaks ENCSR000EWE ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF274-human ENCAB000AMU DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF323AWS 100451 ENCODE Processing Pipeline 9e6712cfeda8a6b11c1d95d3553cbbab https://www.encodeproject.org/files/ENCFF013QRM/@@download/ENCFF013QRM.bigBed GRCh38 released biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF419SAY bam alignments ENCSR000EWE ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF274-human ENCAB000AMU DNA see document see document False 2011-10-29 ENCODE 1 32 ENCFF000ZFI, ENCFF643CGH 330875443 ENCODE Processing Pipeline 0f2e50c526556d87c58c395e0c0dbba9 https://www.encodeproject.org/files/ENCFF419SAY/@@download/ENCFF419SAY.bam GRCh38 released biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF751BCV bigBed narrowPeak peaks ENCSR000EWE ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF274-human ENCAB000AMU DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF641RNP 13201314 ENCODE Processing Pipeline 05948a8499a5c550db82bf3dfd7b1f9f https://www.encodeproject.org/files/ENCFF751BCV/@@download/ENCFF751BCV.bigBed GRCh38 released biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF883FSC bed narrowPeak conservative idr thresholded peaks ENCSR000EWE ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF274-human ENCAB000AMU DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF107VAF, ENCFF419RSJ, ENCFF641RNP, ENCFF946QMH 6549 ENCODE Processing Pipeline 741d83b1be98f8b196f1317bef91ba78 https://www.encodeproject.org/files/ENCFF883FSC/@@download/ENCFF883FSC.bed.gz GRCh38 released biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF323AWS bed narrowPeak optimal idr thresholded peaks ENCSR000EWE ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF274-human ENCAB000AMU DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF107VAF, ENCFF419RSJ, ENCFF641RNP, ENCFF946QMH 7515 ENCODE Processing Pipeline d9d7782ccf01187a959d1c8b960d9165 https://www.encodeproject.org/files/ENCFF323AWS/@@download/ENCFF323AWS.bed.gz GRCh38 released biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF147WKQ bam unfiltered alignments ENCSR000EWE ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF274-human ENCAB000AMU DNA see document see document False 2011-10-29 ENCODE 1 32 ENCFF000ZFI, ENCFF643CGH 974730005 ENCODE Processing Pipeline 9fce0cbe45e7b60d2be61f34f0463eba https://www.encodeproject.org/files/ENCFF147WKQ/@@download/ENCFF147WKQ.bam GRCh38 released biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF421FAR bam unfiltered alignments ENCSR000EWE ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF274-human ENCAB000AMU DNA see document see document False 2011-10-29 ENCODE 2 32 ENCFF000ZFH, ENCFF643CGH 1705319650 ENCODE Processing Pipeline d5b8afe15996e1dfebad7cafcb2a7e72 https://www.encodeproject.org/files/ENCFF421FAR/@@download/ENCFF421FAR.bam GRCh38 released biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF771RPT bigBed narrowPeak peaks ENCSR000EWE ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF274-human ENCAB000AMU DNA see document see document False 2011-10-29 ENCODE 2 ENCFF946QMH 10649409 ENCODE Processing Pipeline ff709a214bc4f760dfd831108590e0fc https://www.encodeproject.org/files/ENCFF771RPT/@@download/ENCFF771RPT.bigBed GRCh38 released biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF641WUE bigWig fold change over control ENCSR000EWE ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF274-human ENCAB000AMU DNA see document see document False 2011-10-29 ENCODE 2 ENCFF355SGP, ENCFF917UQJ 229543023 ENCODE Processing Pipeline 61a8c444eda8c20c4b2a1e4de1e9a3e6 https://www.encodeproject.org/files/ENCFF641WUE/@@download/ENCFF641WUE.bigWig GRCh38 released biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF641RNP bed narrowPeak peaks ENCSR000EWE ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF274-human ENCAB000AMU DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF355SGP, ENCFF419SAY, ENCFF917UQJ 5057158 ENCODE Processing Pipeline 5da2ddeb380094b8f07b7875385f3b69 https://www.encodeproject.org/files/ENCFF641RNP/@@download/ENCFF641RNP.bed.gz GRCh38 released biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF484RPD bigBed narrowPeak conservative idr thresholded peaks ENCSR000EWE ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF274-human ENCAB000AMU DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF883FSC 97462 ENCODE Processing Pipeline e671e26ab23465592ca739f01059fe12 https://www.encodeproject.org/files/ENCFF484RPD/@@download/ENCFF484RPD.bigBed GRCh38 released biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF388VDO bigWig fold change over control ENCSR000EWE ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF274-human ENCAB000AMU DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF355SGP, ENCFF419SAY, ENCFF917UQJ 356760008 ENCODE Processing Pipeline fcfe25c09e40a981b447baa4fb49154b https://www.encodeproject.org/files/ENCFF388VDO/@@download/ENCFF388VDO.bigWig GRCh38 released biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF107VAF bed narrowPeak peaks ENCSR000EWE ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF274-human ENCAB000AMU DNA see document see document False 2011-10-29 ENCODE 1 ENCFF355SGP, ENCFF419SAY 3759397 ENCODE Processing Pipeline 64e11601753af2b69268ee25d8b4e838 https://www.encodeproject.org/files/ENCFF107VAF/@@download/ENCFF107VAF.bed.gz GRCh38 released biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF946QMH bed narrowPeak peaks ENCSR000EWE ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF274-human ENCAB000AMU DNA see document see document False 2011-10-29 ENCODE 2 ENCFF355SGP, ENCFF917UQJ 4469699 ENCODE Processing Pipeline b798da7121cdb7bd1038415f164fd683 https://www.encodeproject.org/files/ENCFF946QMH/@@download/ENCFF946QMH.bed.gz GRCh38 released biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF597FQY bigWig signal p-value ENCSR000EWE ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF274-human ENCAB000AMU DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF355SGP, ENCFF419SAY, ENCFF917UQJ 510787010 ENCODE Processing Pipeline a5a1ffc9674606c405fd83f84ca498d7 https://www.encodeproject.org/files/ENCFF597FQY/@@download/ENCFF597FQY.bigWig GRCh38 released biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF312RQR bigWig fold change over control ENCSR000EWE ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF274-human ENCAB000AMU DNA see document see document False 2011-10-29 ENCODE 1 ENCFF355SGP, ENCFF419SAY 188698780 ENCODE Processing Pipeline c2675a1293d0d0fb93d52aa4df76773c https://www.encodeproject.org/files/ENCFF312RQR/@@download/ENCFF312RQR.bigWig GRCh38 released biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF077MWD bam unfiltered alignments ENCSR000EWE ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF274-human ENCAB000AMU DNA see document see document False 2011-10-29 ENCODE 2 32 ENCFF000ZFH, ENCFF807MUK 1698659020 ENCODE Processing Pipeline 6015ce9b37d1313e3e18b18352885b00 https://www.encodeproject.org/files/ENCFF077MWD/@@download/ENCFF077MWD.bam hg19 released biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF677CAG bigWig signal p-value ENCSR000EWE ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF274-human ENCAB000AMU DNA see document see document False 2011-10-29 ENCODE 1 ENCFF051ZZR, ENCFF232PMQ 414344289 ENCODE Processing Pipeline 828cb4d1f0e5a3ed35ba92c232ccab59 https://www.encodeproject.org/files/ENCFF677CAG/@@download/ENCFF677CAG.bigWig hg19 released biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF384MYM bigWig fold change over control ENCSR000EWE ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF274-human ENCAB000AMU DNA see document see document False 2011-10-29 ENCODE 1 ENCFF051ZZR, ENCFF232PMQ 189133982 ENCODE Processing Pipeline 17095a764d3af6e57bfacb95aff9689e https://www.encodeproject.org/files/ENCFF384MYM/@@download/ENCFF384MYM.bigWig hg19 released biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF231XHO bam unfiltered alignments ENCSR000EWE ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF274-human ENCAB000AMU DNA see document see document False 2011-10-29 ENCODE 1 32 ENCFF000ZFI, ENCFF807MUK 972737810 ENCODE Processing Pipeline c86c854ad308eab40bdd7768170198f2 https://www.encodeproject.org/files/ENCFF231XHO/@@download/ENCFF231XHO.bam hg19 released biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF656PTN bam alignments ENCSR000EWE ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF274-human ENCAB000AMU DNA see document see document False 2011-10-29 ENCODE 2 32 ENCFF000ZFH, ENCFF807MUK 453435524 ENCODE Processing Pipeline 731c46704a14be5203f24ed4de41b416 https://www.encodeproject.org/files/ENCFF656PTN/@@download/ENCFF656PTN.bam hg19 released biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF680PUP bigWig signal p-value ENCSR000EWE ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF274-human ENCAB000AMU DNA see document see document False 2011-10-29 ENCODE 2 ENCFF051ZZR, ENCFF656PTN 403513469 ENCODE Processing Pipeline 9aa3fab6ea0ca505a5a4d097b55051bf https://www.encodeproject.org/files/ENCFF680PUP/@@download/ENCFF680PUP.bigWig hg19 released biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF232PMQ bam alignments ENCSR000EWE ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF274-human ENCAB000AMU DNA see document see document False 2011-10-29 ENCODE 1 32 ENCFF000ZFI, ENCFF807MUK 331155840 ENCODE Processing Pipeline fd673b8b39e6e0178acdf106afc46635 https://www.encodeproject.org/files/ENCFF232PMQ/@@download/ENCFF232PMQ.bam hg19 released biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF555CQE bigWig fold change over control ENCSR000EWE ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF274-human ENCAB000AMU DNA see document see document False 2011-10-29 ENCODE 2 ENCFF051ZZR, ENCFF656PTN 227779283 ENCODE Processing Pipeline ae5907d54107b7febf9b4a943c1e6b52 https://www.encodeproject.org/files/ENCFF555CQE/@@download/ENCFF555CQE.bigWig hg19 released biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF836LBG bed narrowPeak optimal idr thresholded peaks ENCSR000EWE ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF274-human ENCAB000AMU DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF001TDO, ENCFF337RTD, ENCFF556HBG, ENCFF565OZP 7351 ENCODE Processing Pipeline ee40819a3e319921e26d72427860725d https://www.encodeproject.org/files/ENCFF836LBG/@@download/ENCFF836LBG.bed.gz hg19 released biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF218UAN bigBed narrowPeak optimal idr thresholded peaks ENCSR000EWE ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF274-human ENCAB000AMU DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF836LBG 89261 ENCODE Processing Pipeline 409934c4ccf50e43dc04753910730350 https://www.encodeproject.org/files/ENCFF218UAN/@@download/ENCFF218UAN.bigBed hg19 released biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF556HBG bed narrowPeak peaks ENCSR000EWE ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF274-human ENCAB000AMU DNA see document see document False 2011-10-29 ENCODE 1 ENCFF051ZZR, ENCFF232PMQ 3877075 ENCODE Processing Pipeline 7b1aef55c64986987534c8007ecdb9d7 https://www.encodeproject.org/files/ENCFF556HBG/@@download/ENCFF556HBG.bed.gz hg19 released biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF447RBZ bigBed narrowPeak conservative idr thresholded peaks ENCSR000EWE ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF274-human ENCAB000AMU DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF250QWW 97909 ENCODE Processing Pipeline f51d288ab4e2afdb7e00fc5789ff0230 https://www.encodeproject.org/files/ENCFF447RBZ/@@download/ENCFF447RBZ.bigBed hg19 released biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF242HCM bigWig signal p-value ENCSR000EWE ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF274-human ENCAB000AMU DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF051ZZR, ENCFF232PMQ, ENCFF656PTN 403176546 ENCODE Processing Pipeline d9f7bbc9bd484ce3725d82cafeb0b3af https://www.encodeproject.org/files/ENCFF242HCM/@@download/ENCFF242HCM.bigWig hg19 released biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF337RTD bed narrowPeak peaks ENCSR000EWE ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF274-human ENCAB000AMU DNA see document see document False 2011-10-29 ENCODE 2 ENCFF051ZZR, ENCFF656PTN 4049903 ENCODE Processing Pipeline 34a201468fe2cc830b77ab03cb4dab1e https://www.encodeproject.org/files/ENCFF337RTD/@@download/ENCFF337RTD.bed.gz hg19 released biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF565OZP bed narrowPeak peaks ENCSR000EWE ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF274-human ENCAB000AMU DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF051ZZR, ENCFF232PMQ, ENCFF656PTN 5185896 ENCODE Processing Pipeline fc998cd8fd37762830baf54b29fc2691 https://www.encodeproject.org/files/ENCFF565OZP/@@download/ENCFF565OZP.bed.gz hg19 released biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF418YIB bigBed narrowPeak peaks ENCSR000EWE ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF274-human ENCAB000AMU DNA see document see document False 2011-10-29 ENCODE 1 ENCFF556HBG 9147555 ENCODE Processing Pipeline 895bf68f6d525c5330ced594d51667c4 https://www.encodeproject.org/files/ENCFF418YIB/@@download/ENCFF418YIB.bigBed hg19 released biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF792TFG bigWig fold change over control ENCSR000EWE ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF274-human ENCAB000AMU DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF051ZZR, ENCFF232PMQ, ENCFF656PTN 359761217 ENCODE Processing Pipeline 94eacbe92c9a8c397305a08c7033967f https://www.encodeproject.org/files/ENCFF792TFG/@@download/ENCFF792TFG.bigWig hg19 released biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF782ADN bigBed narrowPeak peaks ENCSR000EWE ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF274-human ENCAB000AMU DNA see document see document False 2011-10-29 ENCODE 2 ENCFF337RTD 10338120 ENCODE Processing Pipeline 84be07d48fdfb690f9138da3621d19b1 https://www.encodeproject.org/files/ENCFF782ADN/@@download/ENCFF782ADN.bigBed hg19 released biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF215SDK bigBed narrowPeak peaks ENCSR000EWE ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF274-human ENCAB000AMU DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF565OZP 13215479 ENCODE Processing Pipeline 65b154a4d63a3164dc419254f07858fb https://www.encodeproject.org/files/ENCFF215SDK/@@download/ENCFF215SDK.bigBed hg19 released biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF250QWW bed narrowPeak conservative idr thresholded peaks ENCSR000EWE ChIP-seq EFO:0002067 K562 cell line Homo sapiens ZNF274-human ENCAB000AMU DNA see document see document False 2011-10-29 ENCODE 1, 2 ENCFF001TDO, ENCFF337RTD, ENCFF556HBG, ENCFF565OZP 7168 ENCODE Processing Pipeline 273ee6f9d917693d1e67568a730f052d https://www.encodeproject.org/files/ENCFF250QWW/@@download/ENCFF250QWW.bed.gz hg19 released biological replicates with identical biosample insufficient read length, insufficient read depth ENCFF736KYF bam unfiltered alignments ENCSR137ZMQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens REST-human ENCAB904KUI DNA False 2014-07-07 ENCODE 1 100 ENCFF002EIZ, ENCFF002EJC, ENCFF807MUK 7993684061 ENCODE Processing Pipeline 7cfa287f9cef1ad8bc56ef6c6a01d95f https://www.encodeproject.org/files/ENCFF736KYF/@@download/ENCFF736KYF.bam hg19 released borderline replicate concordance, mild to moderate bottlenecking ENCFF271TUU bam unfiltered alignments ENCSR137ZMQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens REST-human ENCAB904KUI DNA False 2014-07-07 ENCODE 2 100 ENCFF002EJE, ENCFF002EJH, ENCFF807MUK 8670484258 ENCODE Processing Pipeline 675bc5a30f01f98c4a53f1cdecb244f4 https://www.encodeproject.org/files/ENCFF271TUU/@@download/ENCFF271TUU.bam hg19 released borderline replicate concordance, mild to moderate bottlenecking ENCFF002EIZ fastq reads ENCSR137ZMQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens REST-human ENCAB904KUI DNA False 2014-07-07 ENCODE 1 1 100 paired-ended 2 ENCFF002EJC 3926483864 Michael Snyder, Stanford 87ef038fad4e4d1109bf1a85e9d37cd6 SRA:SRR5111206 https://www.encodeproject.org/files/ENCFF002EIZ/@@download/ENCFF002EIZ.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFH/ released borderline replicate concordance, mild to moderate bottlenecking ENCFF002EJC fastq reads ENCSR137ZMQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens REST-human ENCAB904KUI DNA False 2014-07-07 ENCODE 1 1 100 paired-ended 1 ENCFF002EIZ 3863623420 Michael Snyder, Stanford d99929decd38bb4545deadef59fe86f0 SRA:SRR5111206 https://www.encodeproject.org/files/ENCFF002EJC/@@download/ENCFF002EJC.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFF/ released borderline replicate concordance, mild to moderate bottlenecking ENCFF002EJE fastq reads ENCSR137ZMQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens REST-human ENCAB904KUI DNA False 2014-07-07 ENCODE 2 1 100 paired-ended 1 ENCFF002EJH 4048479655 Michael Snyder, Stanford facc6b276891fc13d765deb9077f358c SRA:SRR5111207 https://www.encodeproject.org/files/ENCFF002EJE/@@download/ENCFF002EJE.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFD/ released borderline replicate concordance, mild to moderate bottlenecking ENCFF002EJH fastq reads ENCSR137ZMQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens REST-human ENCAB904KUI DNA False 2014-07-07 ENCODE 2 1 100 paired-ended 2 ENCFF002EJE 4119366336 Michael Snyder, Stanford 71ed40d3a51361e9c8f4413190dbee92 SRA:SRR5111207 https://www.encodeproject.org/files/ENCFF002EJH/@@download/ENCFF002EJH.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFA/ released borderline replicate concordance, mild to moderate bottlenecking ENCFF686NWE bam alignments ENCSR137ZMQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens REST-human ENCAB904KUI DNA False 2014-07-07 ENCODE 1 100 ENCFF002EIZ, ENCFF002EJC, ENCFF807MUK 6145022951 ENCODE Processing Pipeline cdc2bda4d37c4678a76fc0925fb4ceec https://www.encodeproject.org/files/ENCFF686NWE/@@download/ENCFF686NWE.bam hg19 released borderline replicate concordance, mild to moderate bottlenecking ENCFF541OZF bam alignments ENCSR137ZMQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens REST-human ENCAB904KUI DNA False 2014-07-07 ENCODE 2 100 ENCFF002EJE, ENCFF002EJH, ENCFF807MUK 7576163211 ENCODE Processing Pipeline 1065e15e8931a0f793c9a68de4918473 https://www.encodeproject.org/files/ENCFF541OZF/@@download/ENCFF541OZF.bam hg19 released borderline replicate concordance, mild to moderate bottlenecking ENCFF641FNZ bigWig signal p-value ENCSR137ZMQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens REST-human ENCAB904KUI DNA False 2014-07-07 ENCODE 2 ENCFF051LWI, ENCFF541OZF, ENCFF581ZJL 1982005740 ENCODE Processing Pipeline 1e66eea0371576f9bc33d74280580391 https://www.encodeproject.org/files/ENCFF641FNZ/@@download/ENCFF641FNZ.bigWig hg19 released borderline replicate concordance, mild to moderate bottlenecking ENCFF989DME bigWig fold change over control ENCSR137ZMQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens REST-human ENCAB904KUI DNA False 2014-07-07 ENCODE 2 ENCFF051LWI, ENCFF541OZF, ENCFF581ZJL 2019299394 ENCODE Processing Pipeline bc4a78ec696aa8c8379ce3c6da68642d https://www.encodeproject.org/files/ENCFF989DME/@@download/ENCFF989DME.bigWig hg19 released borderline replicate concordance, mild to moderate bottlenecking ENCFF116JZW bed narrowPeak peaks ENCSR137ZMQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens REST-human ENCAB904KUI DNA False 2014-07-07 ENCODE 1 ENCFF581ZJL, ENCFF686NWE 6978919 ENCODE Processing Pipeline cf5c9590a33d846f803d14df40f54a91 https://www.encodeproject.org/files/ENCFF116JZW/@@download/ENCFF116JZW.bed.gz hg19 released borderline replicate concordance, mild to moderate bottlenecking ENCFF845KEC bigWig signal p-value ENCSR137ZMQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens REST-human ENCAB904KUI DNA False 2014-07-07 ENCODE 1 ENCFF581ZJL, ENCFF686NWE 1121429634 ENCODE Processing Pipeline 0c5b4454e71dd15df12504dd22f434d5 https://www.encodeproject.org/files/ENCFF845KEC/@@download/ENCFF845KEC.bigWig hg19 released borderline replicate concordance, mild to moderate bottlenecking ENCFF924SZQ bigWig fold change over control ENCSR137ZMQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens REST-human ENCAB904KUI DNA False 2014-07-07 ENCODE 1 ENCFF581ZJL, ENCFF686NWE 1437132658 ENCODE Processing Pipeline 18034fa6719c2fc8bb114003d54dd6bd https://www.encodeproject.org/files/ENCFF924SZQ/@@download/ENCFF924SZQ.bigWig hg19 released borderline replicate concordance, mild to moderate bottlenecking ENCFF598GWD bigBed narrowPeak peaks ENCSR137ZMQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens REST-human ENCAB904KUI DNA False 2014-07-07 ENCODE 1 ENCFF116JZW 13650097 ENCODE Processing Pipeline 6cef821678752448b3aa5013f55ea317 https://www.encodeproject.org/files/ENCFF598GWD/@@download/ENCFF598GWD.bigBed hg19 released borderline replicate concordance, mild to moderate bottlenecking ENCFF571ECM bigWig fold change over control ENCSR137ZMQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens REST-human ENCAB904KUI DNA False 2014-07-07 ENCODE 1, 2 ENCFF051LWI, ENCFF541OZF, ENCFF581ZJL, ENCFF686NWE 2515200163 ENCODE Processing Pipeline a1c7b39367fae79abbc206c42c803e62 https://www.encodeproject.org/files/ENCFF571ECM/@@download/ENCFF571ECM.bigWig hg19 released borderline replicate concordance, mild to moderate bottlenecking ENCFF117TCV bigBed narrowPeak peaks ENCSR137ZMQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens REST-human ENCAB904KUI DNA False 2014-07-07 ENCODE 2 ENCFF267RGU 11335660 ENCODE Processing Pipeline b6b65c83be34a18648757b9ade73019a https://www.encodeproject.org/files/ENCFF117TCV/@@download/ENCFF117TCV.bigBed hg19 released borderline replicate concordance, mild to moderate bottlenecking ENCFF905SQA bigWig signal p-value ENCSR137ZMQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens REST-human ENCAB904KUI DNA False 2014-07-07 ENCODE 1, 2 ENCFF051LWI, ENCFF541OZF, ENCFF581ZJL, ENCFF686NWE 2438423538 ENCODE Processing Pipeline 9dd6ce2f5d70d14e6b401b7597eabbed https://www.encodeproject.org/files/ENCFF905SQA/@@download/ENCFF905SQA.bigWig hg19 released borderline replicate concordance, mild to moderate bottlenecking ENCFF267RGU bed narrowPeak peaks ENCSR137ZMQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens REST-human ENCAB904KUI DNA False 2014-07-07 ENCODE 2 ENCFF051LWI, ENCFF541OZF, ENCFF581ZJL 7085717 ENCODE Processing Pipeline 86e12d6a6279d291ed62cc05f1c9411f https://www.encodeproject.org/files/ENCFF267RGU/@@download/ENCFF267RGU.bed.gz hg19 released borderline replicate concordance, mild to moderate bottlenecking ENCFF876EHZ bed narrowPeak peaks ENCSR137ZMQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens REST-human ENCAB904KUI DNA False 2014-07-07 ENCODE 1, 2 ENCFF051LWI, ENCFF541OZF, ENCFF581ZJL, ENCFF686NWE 7253211 ENCODE Processing Pipeline 0457be4dfc44cdc4dccdf0556f3d019e https://www.encodeproject.org/files/ENCFF876EHZ/@@download/ENCFF876EHZ.bed.gz hg19 released borderline replicate concordance, mild to moderate bottlenecking ENCFF795PUD bigBed narrowPeak peaks ENCSR137ZMQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens REST-human ENCAB904KUI DNA False 2014-07-07 ENCODE 1, 2 ENCFF876EHZ 13767000 ENCODE Processing Pipeline 81c3ca34f81e9aa2958226a684c18f3d https://www.encodeproject.org/files/ENCFF795PUD/@@download/ENCFF795PUD.bigBed hg19 released borderline replicate concordance, mild to moderate bottlenecking ENCFF481VHS bam unfiltered alignments ENCSR137ZMQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens REST-human ENCAB904KUI DNA False 2014-07-07 ENCODE 1 100 ENCFF002EIZ, ENCFF002EJC, ENCFF643CGH 8000788980 ENCODE Processing Pipeline d728764fb7e95b4d15176b0bb6750fe3 https://www.encodeproject.org/files/ENCFF481VHS/@@download/ENCFF481VHS.bam GRCh38 released borderline replicate concordance, mild to moderate bottlenecking ENCFF369DNX bam unfiltered alignments ENCSR137ZMQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens REST-human ENCAB904KUI DNA False 2014-07-07 ENCODE 2 100 ENCFF002EJE, ENCFF002EJH, ENCFF643CGH 8683654815 ENCODE Processing Pipeline 96ad24ba115abdf5cae1084999d5b317 https://www.encodeproject.org/files/ENCFF369DNX/@@download/ENCFF369DNX.bam GRCh38 released borderline replicate concordance, mild to moderate bottlenecking ENCFF268CBK bam alignments ENCSR137ZMQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens REST-human ENCAB904KUI DNA False 2014-07-07 ENCODE 2 100 ENCFF002EJE, ENCFF002EJH, ENCFF643CGH 7580253131 ENCODE Processing Pipeline b2bcb8476f0f3cde9a8fcf125b87b42f https://www.encodeproject.org/files/ENCFF268CBK/@@download/ENCFF268CBK.bam GRCh38 released borderline replicate concordance, mild to moderate bottlenecking ENCFF253JTJ bam alignments ENCSR137ZMQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens REST-human ENCAB904KUI DNA False 2014-07-07 ENCODE 1 100 ENCFF002EIZ, ENCFF002EJC, ENCFF643CGH 6146180127 ENCODE Processing Pipeline b5ec3479af5363e5e306c421e772c98c https://www.encodeproject.org/files/ENCFF253JTJ/@@download/ENCFF253JTJ.bam GRCh38 released borderline replicate concordance, mild to moderate bottlenecking ENCFF084JEQ bigWig signal p-value ENCSR137ZMQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens REST-human ENCAB904KUI DNA False 2014-07-07 ENCODE 1 ENCFF253JTJ, ENCFF910IKB 1454148530 ENCODE Processing Pipeline 78fb8777e07d9938986db8ee0ae31ad8 https://www.encodeproject.org/files/ENCFF084JEQ/@@download/ENCFF084JEQ.bigWig GRCh38 released borderline replicate concordance, mild to moderate bottlenecking ENCFF127PSG bigWig signal p-value ENCSR137ZMQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens REST-human ENCAB904KUI DNA False 2014-07-07 ENCODE 2 ENCFF227IZS, ENCFF268CBK, ENCFF910IKB 2011842757 ENCODE Processing Pipeline 3a6136a5872ba42878306bfa6563d33c https://www.encodeproject.org/files/ENCFF127PSG/@@download/ENCFF127PSG.bigWig GRCh38 released borderline replicate concordance, mild to moderate bottlenecking ENCFF150AJK bigWig signal p-value ENCSR137ZMQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens REST-human ENCAB904KUI DNA False 2014-07-07 ENCODE 1, 2 ENCFF227IZS, ENCFF253JTJ, ENCFF268CBK, ENCFF910IKB 2431652987 ENCODE Processing Pipeline c81ca93ce056088dfce1a264334868d1 https://www.encodeproject.org/files/ENCFF150AJK/@@download/ENCFF150AJK.bigWig GRCh38 released borderline replicate concordance, mild to moderate bottlenecking ENCFF440VUW bigWig fold change over control ENCSR137ZMQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens REST-human ENCAB904KUI DNA False 2014-07-07 ENCODE 1 ENCFF253JTJ, ENCFF910IKB 1431447935 ENCODE Processing Pipeline 6b9a223b0927a9179252b40b46077c45 https://www.encodeproject.org/files/ENCFF440VUW/@@download/ENCFF440VUW.bigWig GRCh38 released borderline replicate concordance, mild to moderate bottlenecking ENCFF339MVN bigWig fold change over control ENCSR137ZMQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens REST-human ENCAB904KUI DNA False 2014-07-07 ENCODE 2 ENCFF227IZS, ENCFF268CBK, ENCFF910IKB 2018641057 ENCODE Processing Pipeline 813a37c3bc008ce83677f41d521cd17c https://www.encodeproject.org/files/ENCFF339MVN/@@download/ENCFF339MVN.bigWig GRCh38 released borderline replicate concordance, mild to moderate bottlenecking ENCFF413WUI bigWig fold change over control ENCSR137ZMQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens REST-human ENCAB904KUI DNA False 2014-07-07 ENCODE 1, 2 ENCFF227IZS, ENCFF253JTJ, ENCFF268CBK, ENCFF910IKB 2506848343 ENCODE Processing Pipeline 33409a0f10aa0f823d7e6027dfd376e1 https://www.encodeproject.org/files/ENCFF413WUI/@@download/ENCFF413WUI.bigWig GRCh38 released borderline replicate concordance, mild to moderate bottlenecking ENCFF221OAM bed narrowPeak peaks ENCSR137ZMQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens REST-human ENCAB904KUI DNA False 2014-07-07 ENCODE 2 ENCFF227IZS, ENCFF268CBK, ENCFF910IKB 7009064 ENCODE Processing Pipeline 448a39b077d4513658bfda7f2c220251 https://www.encodeproject.org/files/ENCFF221OAM/@@download/ENCFF221OAM.bed.gz GRCh38 released borderline replicate concordance, mild to moderate bottlenecking ENCFF465GUK bed narrowPeak peaks ENCSR137ZMQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens REST-human ENCAB904KUI DNA False 2014-07-07 ENCODE 1 ENCFF253JTJ, ENCFF910IKB 6975145 ENCODE Processing Pipeline 6b0fd18b95b306edf1053d274b8ad807 https://www.encodeproject.org/files/ENCFF465GUK/@@download/ENCFF465GUK.bed.gz GRCh38 released borderline replicate concordance, mild to moderate bottlenecking ENCFF290ESJ bed narrowPeak optimal idr thresholded peaks ENCSR137ZMQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens REST-human ENCAB904KUI DNA False 2014-07-07 ENCODE 1, 2 ENCFF048BGI, ENCFF221OAM, ENCFF419RSJ, ENCFF465GUK 861777 ENCODE Processing Pipeline cda2eb3701a3c2cf983119e3cb16ca41 https://www.encodeproject.org/files/ENCFF290ESJ/@@download/ENCFF290ESJ.bed.gz GRCh38 released borderline replicate concordance, mild to moderate bottlenecking ENCFF048BGI bed narrowPeak peaks ENCSR137ZMQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens REST-human ENCAB904KUI DNA False 2014-07-07 ENCODE 1, 2 ENCFF227IZS, ENCFF253JTJ, ENCFF268CBK, ENCFF910IKB 7225529 ENCODE Processing Pipeline 773ddfa0d6425cd17e06bb3dcf5d3dbf https://www.encodeproject.org/files/ENCFF048BGI/@@download/ENCFF048BGI.bed.gz GRCh38 released borderline replicate concordance, mild to moderate bottlenecking ENCFF873AFN bigBed narrowPeak peaks ENCSR137ZMQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens REST-human ENCAB904KUI DNA False 2014-07-07 ENCODE 1 ENCFF465GUK 13737306 ENCODE Processing Pipeline 4cd304cdf8acc90837de68ca81bcc825 https://www.encodeproject.org/files/ENCFF873AFN/@@download/ENCFF873AFN.bigBed GRCh38 released borderline replicate concordance, mild to moderate bottlenecking ENCFF688QFD bigBed narrowPeak peaks ENCSR137ZMQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens REST-human ENCAB904KUI DNA False 2014-07-07 ENCODE 2 ENCFF221OAM 11332090 ENCODE Processing Pipeline f34df3200ba263d219536e6251325c75 https://www.encodeproject.org/files/ENCFF688QFD/@@download/ENCFF688QFD.bigBed GRCh38 released borderline replicate concordance, mild to moderate bottlenecking ENCFF418BWE bed narrowPeak conservative idr thresholded peaks ENCSR137ZMQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens REST-human ENCAB904KUI DNA False 2014-07-07 ENCODE 1, 2 ENCFF048BGI, ENCFF221OAM, ENCFF419RSJ, ENCFF465GUK 634000 ENCODE Processing Pipeline 9e0cb2424df83a5fd404c4d65397f4a8 https://www.encodeproject.org/files/ENCFF418BWE/@@download/ENCFF418BWE.bed.gz GRCh38 released borderline replicate concordance, mild to moderate bottlenecking ENCFF233GYT bigBed narrowPeak optimal idr thresholded peaks ENCSR137ZMQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens REST-human ENCAB904KUI DNA False 2014-07-07 ENCODE 1, 2 ENCFF290ESJ 1746111 ENCODE Processing Pipeline fcac0f1bfb9f140aca9082190ea8bca2 https://www.encodeproject.org/files/ENCFF233GYT/@@download/ENCFF233GYT.bigBed GRCh38 released borderline replicate concordance, mild to moderate bottlenecking ENCFF520MVX bigBed narrowPeak peaks ENCSR137ZMQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens REST-human ENCAB904KUI DNA False 2014-07-07 ENCODE 1, 2 ENCFF048BGI 13749328 ENCODE Processing Pipeline ff4e802f37cfe2839544a4bee8468ab7 https://www.encodeproject.org/files/ENCFF520MVX/@@download/ENCFF520MVX.bigBed GRCh38 released borderline replicate concordance, mild to moderate bottlenecking ENCFF937IPC bigBed narrowPeak conservative idr thresholded peaks ENCSR137ZMQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens REST-human ENCAB904KUI DNA False 2014-07-07 ENCODE 1, 2 ENCFF418BWE 1380091 ENCODE Processing Pipeline 6c3f7ae1e8d93f9a7522d2f9ce434411 https://www.encodeproject.org/files/ENCFF937IPC/@@download/ENCFF937IPC.bigBed GRCh38 released borderline replicate concordance, mild to moderate bottlenecking ENCFF750YVW bigBed narrowPeak conservative idr thresholded peaks ENCSR137ZMQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens REST-human ENCAB904KUI DNA False 2014-07-07 ENCODE 1, 2 ENCFF120MVT 986998 ENCODE Processing Pipeline 68393c4f647ef9eb501acdcbb65a09e6 https://www.encodeproject.org/files/ENCFF750YVW/@@download/ENCFF750YVW.bigBed hg19 released borderline replicate concordance, mild to moderate bottlenecking ENCFF120MVT bed narrowPeak conservative idr thresholded peaks ENCSR137ZMQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens REST-human ENCAB904KUI DNA False 2014-07-07 ENCODE 1, 2 ENCFF001TDO, ENCFF116JZW, ENCFF267RGU, ENCFF876EHZ 572629 ENCODE Processing Pipeline d95b5bae8dbbcd87ca390a6b07ccfc8b https://www.encodeproject.org/files/ENCFF120MVT/@@download/ENCFF120MVT.bed.gz hg19 released borderline replicate concordance, mild to moderate bottlenecking ENCFF432NDF bigBed narrowPeak optimal idr thresholded peaks ENCSR137ZMQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens REST-human ENCAB904KUI DNA False 2014-07-07 ENCODE 1, 2 ENCFF895QLA 1226582 ENCODE Processing Pipeline 0a82df9af5033c2080529d3975d146a4 https://www.encodeproject.org/files/ENCFF432NDF/@@download/ENCFF432NDF.bigBed hg19 released borderline replicate concordance, mild to moderate bottlenecking ENCFF895QLA bed narrowPeak optimal idr thresholded peaks ENCSR137ZMQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens REST-human ENCAB904KUI DNA False 2014-07-07 ENCODE 1, 2 ENCFF001TDO, ENCFF116JZW, ENCFF267RGU, ENCFF876EHZ 767264 ENCODE Processing Pipeline 566a637ff871d08a8eb27aa1153826fb https://www.encodeproject.org/files/ENCFF895QLA/@@download/ENCFF895QLA.bed.gz hg19 released borderline replicate concordance, mild to moderate bottlenecking ENCFF191GYB bam unfiltered alignments ENCSR079WHK ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM5-human ENCAB158FXS DNA False 2016-09-27 ENCODE 1 100 ENCFF383AYS, ENCFF710PPD, ENCFF807MUK 4386378976 ENCODE Processing Pipeline 813d58ad455c96a98dd9ee3ff2f12a52 https://www.encodeproject.org/files/ENCFF191GYB/@@download/ENCFF191GYB.bam hg19 released borderline replicate concordance, low read depth missing control alignments ENCFF370TKX bam unfiltered alignments ENCSR079WHK ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM5-human ENCAB158FXS DNA False 2016-09-27 ENCODE 2 100 ENCFF238TRM, ENCFF447WZH, ENCFF807MUK 4647997486 ENCODE Processing Pipeline d8287ee53720dcd7a332c4e55e488784 https://www.encodeproject.org/files/ENCFF370TKX/@@download/ENCFF370TKX.bam hg19 released borderline replicate concordance, low read depth missing control alignments ENCFF383AYS fastq reads ENCSR079WHK ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM5-human ENCAB158FXS DNA False 2016-09-27 ENCODE 1 1 100 paired-ended 1 ENCFF710PPD 1967340735 Michael Snyder, Stanford fb8838685413b1b84e689fc873bd474c SRA:SRR5111044 https://www.encodeproject.org/files/ENCFF383AYS/@@download/ENCFF383AYS.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFF/ released borderline replicate concordance, low read depth missing control alignments ENCFF710PPD fastq reads ENCSR079WHK ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM5-human ENCAB158FXS DNA False 2016-09-27 ENCODE 1 1 100 paired-ended 2 ENCFF383AYS 2010455509 Michael Snyder, Stanford 36cc1dba720ca8e530dcb929313c7f8b SRA:SRR5111044 https://www.encodeproject.org/files/ENCFF710PPD/@@download/ENCFF710PPD.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFH/ released borderline replicate concordance, low read depth missing control alignments ENCFF447WZH fastq reads ENCSR079WHK ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM5-human ENCAB158FXS DNA False 2016-09-27 ENCODE 2 1 100 paired-ended 1 ENCFF238TRM 2083404393 Michael Snyder, Stanford 1729f71214fff845a47177e596b82ce6 SRA:SRR5111043 https://www.encodeproject.org/files/ENCFF447WZH/@@download/ENCFF447WZH.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFD/ released borderline replicate concordance, low read depth missing control alignments ENCFF238TRM fastq reads ENCSR079WHK ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM5-human ENCAB158FXS DNA False 2016-09-27 ENCODE 2 1 100 paired-ended 2 ENCFF447WZH 2124493373 Michael Snyder, Stanford 3601227a2c05d3ae1e1055334fb5aa6d SRA:SRR5111043 https://www.encodeproject.org/files/ENCFF238TRM/@@download/ENCFF238TRM.fastq.gz Illumina HiSeq 2000 /files/ENCFF002EFA/ released borderline replicate concordance, low read depth missing control alignments ENCFF903MUJ bam alignments ENCSR079WHK ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM5-human ENCAB158FXS DNA False 2016-09-27 ENCODE 1 100 ENCFF383AYS, ENCFF710PPD, ENCFF807MUK 3569626603 ENCODE Processing Pipeline e272bcda146924e2b1688e89bfa6928e https://www.encodeproject.org/files/ENCFF903MUJ/@@download/ENCFF903MUJ.bam hg19 released borderline replicate concordance, low read depth missing control alignments ENCFF308WNU bam alignments ENCSR079WHK ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM5-human ENCAB158FXS DNA False 2016-09-27 ENCODE 2 100 ENCFF238TRM, ENCFF447WZH, ENCFF807MUK 3890881191 ENCODE Processing Pipeline 55bd3b4deb0e1a75a3735a5d828f86d6 https://www.encodeproject.org/files/ENCFF308WNU/@@download/ENCFF308WNU.bam hg19 released borderline replicate concordance, low read depth missing control alignments ENCFF943GBN bigWig signal p-value ENCSR079WHK ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM5-human ENCAB158FXS DNA False 2016-09-27 ENCODE 1 ENCFF581ZJL, ENCFF903MUJ 957399862 ENCODE Processing Pipeline 922efc49309861d4f90010290254d038 https://www.encodeproject.org/files/ENCFF943GBN/@@download/ENCFF943GBN.bigWig hg19 released borderline replicate concordance, low read depth missing control alignments ENCFF247FQX bigWig fold change over control ENCSR079WHK ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM5-human ENCAB158FXS DNA False 2016-09-27 ENCODE 1 ENCFF581ZJL, ENCFF903MUJ 1074855654 ENCODE Processing Pipeline 03ea4eee180e985dcd048f155e69cf43 https://www.encodeproject.org/files/ENCFF247FQX/@@download/ENCFF247FQX.bigWig hg19 released borderline replicate concordance, low read depth missing control alignments ENCFF966ITV bigWig signal p-value ENCSR079WHK ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM5-human ENCAB158FXS DNA False 2016-09-27 ENCODE 2 ENCFF051LWI, ENCFF308WNU 1091368013 ENCODE Processing Pipeline d2e61af49fa45fa4f82a562c67da8d3b https://www.encodeproject.org/files/ENCFF966ITV/@@download/ENCFF966ITV.bigWig hg19 released borderline replicate concordance, low read depth missing control alignments ENCFF720HPI bigWig fold change over control ENCSR079WHK ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM5-human ENCAB158FXS DNA False 2016-09-27 ENCODE 2 ENCFF051LWI, ENCFF308WNU 1077424227 ENCODE Processing Pipeline ef620e0757233b7071a32016d45c4985 https://www.encodeproject.org/files/ENCFF720HPI/@@download/ENCFF720HPI.bigWig hg19 released borderline replicate concordance, low read depth missing control alignments ENCFF204DTZ bigWig signal p-value ENCSR079WHK ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM5-human ENCAB158FXS DNA False 2016-09-27 ENCODE 1, 2 ENCFF051LWI, ENCFF308WNU, ENCFF581ZJL, ENCFF903MUJ 1730937638 ENCODE Processing Pipeline 82407efc64f481707a683c08e16c4595 https://www.encodeproject.org/files/ENCFF204DTZ/@@download/ENCFF204DTZ.bigWig hg19 released borderline replicate concordance, low read depth missing control alignments ENCFF243CWO bigWig fold change over control ENCSR079WHK ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM5-human ENCAB158FXS DNA False 2016-09-27 ENCODE 1, 2 ENCFF051LWI, ENCFF308WNU, ENCFF581ZJL, ENCFF903MUJ 1950990559 ENCODE Processing Pipeline c95c16d5d1c738804165600537c6cd4d https://www.encodeproject.org/files/ENCFF243CWO/@@download/ENCFF243CWO.bigWig hg19 released borderline replicate concordance, low read depth missing control alignments ENCFF508CQR bed narrowPeak peaks ENCSR079WHK ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM5-human ENCAB158FXS DNA False 2016-09-27 ENCODE 1, 2 ENCFF051LWI, ENCFF308WNU, ENCFF581ZJL, ENCFF903MUJ 6202139 ENCODE Processing Pipeline ab27d8f45f974a913458d063b70a81cb https://www.encodeproject.org/files/ENCFF508CQR/@@download/ENCFF508CQR.bed.gz hg19 released borderline replicate concordance, low read depth missing control alignments ENCFF415ATH bed narrowPeak peaks ENCSR079WHK ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM5-human ENCAB158FXS DNA False 2016-09-27 ENCODE 1 ENCFF581ZJL, ENCFF903MUJ 5480434 ENCODE Processing Pipeline e663731b6cbec67cbebc13b84865e7a6 https://www.encodeproject.org/files/ENCFF415ATH/@@download/ENCFF415ATH.bed.gz hg19 released borderline replicate concordance, low read depth missing control alignments ENCFF397VOW bed narrowPeak peaks ENCSR079WHK ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM5-human ENCAB158FXS DNA False 2016-09-27 ENCODE 2 ENCFF051LWI, ENCFF308WNU 5396166 ENCODE Processing Pipeline 2fb2202576ba8df823a78813e0b45aba https://www.encodeproject.org/files/ENCFF397VOW/@@download/ENCFF397VOW.bed.gz hg19 released borderline replicate concordance, low read depth missing control alignments ENCFF497KQC bigBed narrowPeak peaks ENCSR079WHK ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM5-human ENCAB158FXS DNA False 2016-09-27 ENCODE 1 ENCFF415ATH 10416662 ENCODE Processing Pipeline 160d3cef7565f40229f43a14b0dbae3c https://www.encodeproject.org/files/ENCFF497KQC/@@download/ENCFF497KQC.bigBed hg19 released borderline replicate concordance, low read depth missing control alignments ENCFF095OFS bigBed narrowPeak conservative idr thresholded peaks ENCSR079WHK ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM5-human ENCAB158FXS DNA False 2016-09-27 ENCODE 1, 2 ENCFF326NWF 65111 ENCODE Processing Pipeline 6110d2c7e16fae72f26098e373903c8e https://www.encodeproject.org/files/ENCFF095OFS/@@download/ENCFF095OFS.bigBed hg19 released borderline replicate concordance, low read depth missing control alignments ENCFF872YNU bed narrowPeak optimal idr thresholded peaks ENCSR079WHK ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM5-human ENCAB158FXS DNA False 2016-09-27 ENCODE 1, 2 ENCFF001TDO, ENCFF397VOW, ENCFF415ATH, ENCFF508CQR 7405 ENCODE Processing Pipeline ee5d6d997ebb23f6c456b49af593f6a6 https://www.encodeproject.org/files/ENCFF872YNU/@@download/ENCFF872YNU.bed.gz hg19 released borderline replicate concordance, low read depth missing control alignments ENCFF922WXV bigBed narrowPeak optimal idr thresholded peaks ENCSR079WHK ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM5-human ENCAB158FXS DNA False 2016-09-27 ENCODE 1, 2 ENCFF872YNU 71417 ENCODE Processing Pipeline f1872f781624ac456357936d46b39375 https://www.encodeproject.org/files/ENCFF922WXV/@@download/ENCFF922WXV.bigBed hg19 released borderline replicate concordance, low read depth missing control alignments ENCFF516LDB bigBed narrowPeak peaks ENCSR079WHK ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM5-human ENCAB158FXS DNA False 2016-09-27 ENCODE 2 ENCFF397VOW 10119024 ENCODE Processing Pipeline 05cdc886052c7b3c3d4e89471fb9b7c0 https://www.encodeproject.org/files/ENCFF516LDB/@@download/ENCFF516LDB.bigBed hg19 released borderline replicate concordance, low read depth missing control alignments ENCFF326NWF bed narrowPeak conservative idr thresholded peaks ENCSR079WHK ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM5-human ENCAB158FXS DNA False 2016-09-27 ENCODE 1, 2 ENCFF001TDO, ENCFF397VOW, ENCFF415ATH, ENCFF508CQR 2144 ENCODE Processing Pipeline a2b230274b13d559d71574aa4f04a0b8 https://www.encodeproject.org/files/ENCFF326NWF/@@download/ENCFF326NWF.bed.gz hg19 released borderline replicate concordance, low read depth missing control alignments ENCFF687WUF bigBed narrowPeak peaks ENCSR079WHK ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM5-human ENCAB158FXS DNA False 2016-09-27 ENCODE 1, 2 ENCFF508CQR 10051452 ENCODE Processing Pipeline 24c19914725f9e89fe35079504744234 https://www.encodeproject.org/files/ENCFF687WUF/@@download/ENCFF687WUF.bigBed hg19 released borderline replicate concordance, low read depth missing control alignments ENCFF505ZCU bam unfiltered alignments ENCSR079WHK ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM5-human ENCAB158FXS DNA False 2016-09-27 ENCODE 1 100 ENCFF383AYS, ENCFF643CGH, ENCFF710PPD 4391832009 ENCODE Processing Pipeline c99eb543072ddeac2cf324a55ba14770 https://www.encodeproject.org/files/ENCFF505ZCU/@@download/ENCFF505ZCU.bam GRCh38 released borderline replicate concordance, low read depth missing control alignments ENCFF584NCF bam unfiltered alignments ENCSR079WHK ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM5-human ENCAB158FXS DNA False 2016-09-27 ENCODE 2 100 ENCFF238TRM, ENCFF447WZH, ENCFF643CGH 4653717793 ENCODE Processing Pipeline 6bccf28dad9a90a6947a91d73476ec44 https://www.encodeproject.org/files/ENCFF584NCF/@@download/ENCFF584NCF.bam GRCh38 released borderline replicate concordance, low read depth missing control alignments ENCFF125HKL bam alignments ENCSR079WHK ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM5-human ENCAB158FXS DNA False 2016-09-27 ENCODE 1 100 ENCFF383AYS, ENCFF643CGH, ENCFF710PPD 3571437627 ENCODE Processing Pipeline e67eab9cbb2c3327732e3c2affdb5e4c https://www.encodeproject.org/files/ENCFF125HKL/@@download/ENCFF125HKL.bam GRCh38 released borderline replicate concordance, low read depth missing control alignments ENCFF046VNU bam alignments ENCSR079WHK ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM5-human ENCAB158FXS DNA False 2016-09-27 ENCODE 2 100 ENCFF238TRM, ENCFF447WZH, ENCFF643CGH 3893144631 ENCODE Processing Pipeline f54ab04cffbddb0a498155a87f9782c7 https://www.encodeproject.org/files/ENCFF046VNU/@@download/ENCFF046VNU.bam GRCh38 released borderline replicate concordance, low read depth missing control alignments ENCFF110DXF bigWig signal p-value ENCSR079WHK ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM5-human ENCAB158FXS DNA False 2016-09-27 ENCODE 1 ENCFF125HKL 1047734735 ENCODE Processing Pipeline 70229df8935e3f3f16bcb3c55668f73c https://www.encodeproject.org/files/ENCFF110DXF/@@download/ENCFF110DXF.bigWig GRCh38 released borderline replicate concordance, low read depth missing control alignments ENCFF977KLF bigWig signal p-value ENCSR079WHK ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM5-human ENCAB158FXS DNA False 2016-09-27 ENCODE 2 ENCFF046VNU 1117551182 ENCODE Processing Pipeline 284b2070d88ad9d3378b188b6a8a67b9 https://www.encodeproject.org/files/ENCFF977KLF/@@download/ENCFF977KLF.bigWig GRCh38 released borderline replicate concordance, low read depth missing control alignments ENCFF746LIP bigWig signal p-value ENCSR079WHK ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM5-human ENCAB158FXS DNA False 2016-09-27 ENCODE 1, 2 ENCFF046VNU, ENCFF125HKL 1672085224 ENCODE Processing Pipeline fcdd64e1d4b97589d60ffeb35d4371e4 https://www.encodeproject.org/files/ENCFF746LIP/@@download/ENCFF746LIP.bigWig GRCh38 released borderline replicate concordance, low read depth missing control alignments ENCFF672NLZ bigWig fold change over control ENCSR079WHK ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM5-human ENCAB158FXS DNA False 2016-09-27 ENCODE 1 ENCFF125HKL 1076988749 ENCODE Processing Pipeline 820b58dc781331f05107d3fc9bf40132 https://www.encodeproject.org/files/ENCFF672NLZ/@@download/ENCFF672NLZ.bigWig GRCh38 released borderline replicate concordance, low read depth missing control alignments ENCFF786TYS bigWig fold change over control ENCSR079WHK ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM5-human ENCAB158FXS DNA False 2016-09-27 ENCODE 2 ENCFF046VNU 1075219071 ENCODE Processing Pipeline 40699109d318d1bce9ac5241014d033f https://www.encodeproject.org/files/ENCFF786TYS/@@download/ENCFF786TYS.bigWig GRCh38 released borderline replicate concordance, low read depth missing control alignments ENCFF645VAU bigWig fold change over control ENCSR079WHK ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM5-human ENCAB158FXS DNA False 2016-09-27 ENCODE 1, 2 ENCFF046VNU, ENCFF125HKL 1951433945 ENCODE Processing Pipeline d474d8fa4a2efbc4682b94cf2d38ba12 https://www.encodeproject.org/files/ENCFF645VAU/@@download/ENCFF645VAU.bigWig GRCh38 released borderline replicate concordance, low read depth missing control alignments ENCFF692ENC bed narrowPeak peaks ENCSR079WHK ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM5-human ENCAB158FXS DNA False 2016-09-27 ENCODE 1 ENCFF125HKL 5860619 ENCODE Processing Pipeline 7ac00cd675836b16b392758629b26b51 https://www.encodeproject.org/files/ENCFF692ENC/@@download/ENCFF692ENC.bed.gz GRCh38 released borderline replicate concordance, low read depth missing control alignments ENCFF771QTQ bed narrowPeak peaks ENCSR079WHK ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM5-human ENCAB158FXS DNA False 2016-09-27 ENCODE 2 ENCFF046VNU 5968414 ENCODE Processing Pipeline b17721e18b85f5e14d25f33295df7e3a https://www.encodeproject.org/files/ENCFF771QTQ/@@download/ENCFF771QTQ.bed.gz GRCh38 released borderline replicate concordance, low read depth missing control alignments ENCFF694OEX bed narrowPeak peaks ENCSR079WHK ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM5-human ENCAB158FXS DNA False 2016-09-27 ENCODE 1, 2 ENCFF046VNU, ENCFF125HKL 6895952 ENCODE Processing Pipeline d37be6c274e633cc99cf1a6adfb34e35 https://www.encodeproject.org/files/ENCFF694OEX/@@download/ENCFF694OEX.bed.gz GRCh38 released borderline replicate concordance, low read depth missing control alignments ENCFF742FTA bigBed narrowPeak peaks ENCSR079WHK ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM5-human ENCAB158FXS DNA False 2016-09-27 ENCODE 1 ENCFF692ENC 11160907 ENCODE Processing Pipeline cdf378188d13704665706a00a2877519 https://www.encodeproject.org/files/ENCFF742FTA/@@download/ENCFF742FTA.bigBed GRCh38 released borderline replicate concordance, low read depth missing control alignments ENCFF966MCV bigBed narrowPeak peaks ENCSR079WHK ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM5-human ENCAB158FXS DNA False 2016-09-27 ENCODE 2 ENCFF771QTQ 11124750 ENCODE Processing Pipeline 7767ff2e7f829948ce3f24044404d6aa https://www.encodeproject.org/files/ENCFF966MCV/@@download/ENCFF966MCV.bigBed GRCh38 released borderline replicate concordance, low read depth missing control alignments ENCFF287MFD bigBed narrowPeak peaks ENCSR079WHK ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM5-human ENCAB158FXS DNA False 2016-09-27 ENCODE 1, 2 ENCFF694OEX 10984710 ENCODE Processing Pipeline 7eb7e463d9bc8fbb44f5b88a9fa271ef https://www.encodeproject.org/files/ENCFF287MFD/@@download/ENCFF287MFD.bigBed GRCh38 released borderline replicate concordance, low read depth missing control alignments ENCFF386ZWB bed narrowPeak conservative idr thresholded peaks ENCSR079WHK ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM5-human ENCAB158FXS DNA False 2016-09-27 ENCODE 1, 2 ENCFF419RSJ, ENCFF692ENC, ENCFF694OEX, ENCFF771QTQ 2105 ENCODE Processing Pipeline 69c3ade3eaebd76afc0d8bc18b59f44b https://www.encodeproject.org/files/ENCFF386ZWB/@@download/ENCFF386ZWB.bed.gz GRCh38 released borderline replicate concordance, low read depth missing control alignments ENCFF137PTI bigBed narrowPeak conservative idr thresholded peaks ENCSR079WHK ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM5-human ENCAB158FXS DNA False 2016-09-27 ENCODE 1, 2 ENCFF386ZWB 80350 ENCODE Processing Pipeline 26c413da46ac51702894ad85d6a55d59 https://www.encodeproject.org/files/ENCFF137PTI/@@download/ENCFF137PTI.bigBed GRCh38 released borderline replicate concordance, low read depth missing control alignments ENCFF603SXI bed narrowPeak optimal idr thresholded peaks ENCSR079WHK ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM5-human ENCAB158FXS DNA False 2016-09-27 ENCODE 1, 2 ENCFF419RSJ, ENCFF692ENC, ENCFF694OEX, ENCFF771QTQ 7154 ENCODE Processing Pipeline 1507bf9a1624f8c26861bce02c5ab885 https://www.encodeproject.org/files/ENCFF603SXI/@@download/ENCFF603SXI.bed.gz GRCh38 released borderline replicate concordance, low read depth missing control alignments ENCFF942SBG bigBed narrowPeak optimal idr thresholded peaks ENCSR079WHK ChIP-seq EFO:0002067 K562 cell line Homo sapiens MCM5-human ENCAB158FXS DNA False 2016-09-27 ENCODE 1, 2 ENCFF603SXI 80959 ENCODE Processing Pipeline 594f1bd90cca1f089857f39ed6d8d48a https://www.encodeproject.org/files/ENCFF942SBG/@@download/ENCFF942SBG.bigBed GRCh38 released borderline replicate concordance, low read depth missing control alignments ENCFF045QIG fastq reads ENCSR024CNP ChIP-seq EFO:0002067 K562 cell line Homo sapiens EGR1-human ENCAB538ZMX DNA False 2017-05-17 ENCODE 2 1 100 paired-ended 2 ENCFF871VWH 2518931110 Michael Snyder, Stanford 70786004e3269cdc0a8722280f0353b9 SRA:SRR6212613 https://www.encodeproject.org/files/ENCFF045QIG/@@download/ENCFF045QIG.fastq.gz Illumina HiSeq 2000 /files/ENCFF608MDV/ released low read depth, mild to moderate bottlenecking ENCFF751XCN fastq reads ENCSR024CNP ChIP-seq EFO:0002067 K562 cell line Homo sapiens EGR1-human ENCAB538ZMX DNA False 2017-05-17 ENCODE 1 1 100 paired-ended 2 ENCFF025AGM 3233584735 Michael Snyder, Stanford a81b1c5d106296df0fe97186f32a8cd9 SRA:SRR6212612 https://www.encodeproject.org/files/ENCFF751XCN/@@download/ENCFF751XCN.fastq.gz Illumina HiSeq 2000 /files/ENCFF368UOC/ released low read depth, mild to moderate bottlenecking ENCFF871VWH fastq reads ENCSR024CNP ChIP-seq EFO:0002067 K562 cell line Homo sapiens EGR1-human ENCAB538ZMX DNA False 2017-05-17 ENCODE 2 1 100 paired-ended 1 ENCFF045QIG 2490968169 Michael Snyder, Stanford 34f1938f68fdda5abf1943a25bdcf794 SRA:SRR6212613 https://www.encodeproject.org/files/ENCFF871VWH/@@download/ENCFF871VWH.fastq.gz Illumina HiSeq 2000 /files/ENCFF240DTE/ released low read depth, mild to moderate bottlenecking ENCFF025AGM fastq reads ENCSR024CNP ChIP-seq EFO:0002067 K562 cell line Homo sapiens EGR1-human ENCAB538ZMX DNA False 2017-05-17 ENCODE 1 1 100 paired-ended 1 ENCFF751XCN 3206457672 Michael Snyder, Stanford e3c4c0e1e19b67f3979339a4021ce28b SRA:SRR6212612 https://www.encodeproject.org/files/ENCFF025AGM/@@download/ENCFF025AGM.fastq.gz Illumina HiSeq 2000 /files/ENCFF410PHD/ released low read depth, mild to moderate bottlenecking ENCFF843QAX bam unfiltered alignments ENCSR024CNP ChIP-seq EFO:0002067 K562 cell line Homo sapiens EGR1-human ENCAB538ZMX DNA False 2017-05-17 ENCODE 2 100 ENCFF045QIG, ENCFF807MUK, ENCFF871VWH 5313744194 ENCODE Processing Pipeline f77871e686e56b91048c05fd13bb78ee https://www.encodeproject.org/files/ENCFF843QAX/@@download/ENCFF843QAX.bam hg19 released low read depth, mild to moderate bottlenecking ENCFF234MFX bam unfiltered alignments ENCSR024CNP ChIP-seq EFO:0002067 K562 cell line Homo sapiens EGR1-human ENCAB538ZMX DNA False 2017-05-17 ENCODE 2 100 ENCFF045QIG, ENCFF643CGH, ENCFF871VWH 5317250730 ENCODE Processing Pipeline 1dbf6da7c3b8cecafd33fbb1db2ba275 https://www.encodeproject.org/files/ENCFF234MFX/@@download/ENCFF234MFX.bam GRCh38 released low read depth, mild to moderate bottlenecking ENCFF316YDL bam unfiltered alignments ENCSR024CNP ChIP-seq EFO:0002067 K562 cell line Homo sapiens EGR1-human ENCAB538ZMX DNA False 2017-05-17 ENCODE 1 100 ENCFF025AGM, ENCFF643CGH, ENCFF751XCN 6874953066 ENCODE Processing Pipeline af3cc20c284407afd20397e024abb25a https://www.encodeproject.org/files/ENCFF316YDL/@@download/ENCFF316YDL.bam GRCh38 released low read depth, mild to moderate bottlenecking ENCFF963BNH bam unfiltered alignments ENCSR024CNP ChIP-seq EFO:0002067 K562 cell line Homo sapiens EGR1-human ENCAB538ZMX DNA False 2017-05-17 ENCODE 1 100 ENCFF025AGM, ENCFF751XCN, ENCFF807MUK 6868405320 ENCODE Processing Pipeline 15c953b6f65073a89117790470f41c82 https://www.encodeproject.org/files/ENCFF963BNH/@@download/ENCFF963BNH.bam hg19 released low read depth, mild to moderate bottlenecking ENCFF317UJS bam alignments ENCSR024CNP ChIP-seq EFO:0002067 K562 cell line Homo sapiens EGR1-human ENCAB538ZMX DNA False 2017-05-17 ENCODE 2 100 ENCFF045QIG, ENCFF807MUK, ENCFF871VWH 3825961591 ENCODE Processing Pipeline 604f41d0c5388385fed8506147f690d8 https://www.encodeproject.org/files/ENCFF317UJS/@@download/ENCFF317UJS.bam hg19 released low read depth, mild to moderate bottlenecking ENCFF431IVA bam alignments ENCSR024CNP ChIP-seq EFO:0002067 K562 cell line Homo sapiens EGR1-human ENCAB538ZMX DNA False 2017-05-17 ENCODE 2 100 ENCFF045QIG, ENCFF643CGH, ENCFF871VWH 3827460992 ENCODE Processing Pipeline 7e8c9966fadd7accecffa6b02b53f9ee https://www.encodeproject.org/files/ENCFF431IVA/@@download/ENCFF431IVA.bam GRCh38 released low read depth, mild to moderate bottlenecking ENCFF798EEI bam alignments ENCSR024CNP ChIP-seq EFO:0002067 K562 cell line Homo sapiens EGR1-human ENCAB538ZMX DNA False 2017-05-17 ENCODE 1 100 ENCFF025AGM, ENCFF751XCN, ENCFF807MUK 5431747534 ENCODE Processing Pipeline 8239008e740bc503debbd64791caa238 https://www.encodeproject.org/files/ENCFF798EEI/@@download/ENCFF798EEI.bam hg19 released low read depth, mild to moderate bottlenecking ENCFF528YNP bam alignments ENCSR024CNP ChIP-seq EFO:0002067 K562 cell line Homo sapiens EGR1-human ENCAB538ZMX DNA False 2017-05-17 ENCODE 1 100 ENCFF025AGM, ENCFF643CGH, ENCFF751XCN 5434843391 ENCODE Processing Pipeline fff37a767a1fb79b386f58b25af5aee0 https://www.encodeproject.org/files/ENCFF528YNP/@@download/ENCFF528YNP.bam GRCh38 released low read depth, mild to moderate bottlenecking ENCFF933FEZ bigWig fold change over control ENCSR024CNP ChIP-seq EFO:0002067 K562 cell line Homo sapiens EGR1-human ENCAB538ZMX DNA False 2017-05-17 ENCODE 1, 2 ENCFF262CJE, ENCFF317UJS, ENCFF506DFV, ENCFF798EEI 1866352775 ENCODE Processing Pipeline 1ec7f3788c996e2c70bdba0d9dfb8a95 https://www.encodeproject.org/files/ENCFF933FEZ/@@download/ENCFF933FEZ.bigWig hg19 released low read depth, mild to moderate bottlenecking ENCFF676LLC bigBed narrowPeak peaks ENCSR024CNP ChIP-seq EFO:0002067 K562 cell line Homo sapiens EGR1-human ENCAB538ZMX DNA False 2017-05-17 ENCODE 1 ENCFF782FAJ 11329292 ENCODE Processing Pipeline b41fc0f7c529354871906a580a2b4eb6 https://www.encodeproject.org/files/ENCFF676LLC/@@download/ENCFF676LLC.bigBed hg19 released low read depth, mild to moderate bottlenecking ENCFF067PWU bigWig fold change over control ENCSR024CNP ChIP-seq EFO:0002067 K562 cell line Homo sapiens EGR1-human ENCAB538ZMX DNA False 2017-05-17 ENCODE 2 ENCFF262CJE, ENCFF317UJS, ENCFF506DFV 1185580062 ENCODE Processing Pipeline 887ce0b4e447b025ab15db44a8978ed2 https://www.encodeproject.org/files/ENCFF067PWU/@@download/ENCFF067PWU.bigWig hg19 released low read depth, mild to moderate bottlenecking ENCFF663RBZ bigWig signal p-value ENCSR024CNP ChIP-seq EFO:0002067 K562 cell line Homo sapiens EGR1-human ENCAB538ZMX DNA False 2017-05-17 ENCODE 2 ENCFF262CJE, ENCFF317UJS, ENCFF506DFV 1079922095 ENCODE Processing Pipeline edd10edae1015839ac54ad86c9108042 https://www.encodeproject.org/files/ENCFF663RBZ/@@download/ENCFF663RBZ.bigWig hg19 released low read depth, mild to moderate bottlenecking ENCFF112BTF bigWig signal p-value ENCSR024CNP ChIP-seq EFO:0002067 K562 cell line Homo sapiens EGR1-human ENCAB538ZMX DNA False 2017-05-17 ENCODE 1, 2 ENCFF262CJE, ENCFF317UJS, ENCFF506DFV, ENCFF798EEI 1393067419 ENCODE Processing Pipeline 9fae0814cba0adb2bbc5ef5ecce90c88 https://www.encodeproject.org/files/ENCFF112BTF/@@download/ENCFF112BTF.bigWig hg19 released low read depth, mild to moderate bottlenecking ENCFF255VCC bed narrowPeak peaks ENCSR024CNP ChIP-seq EFO:0002067 K562 cell line Homo sapiens EGR1-human ENCAB538ZMX DNA False 2017-05-17 ENCODE 2 ENCFF262CJE, ENCFF317UJS, ENCFF506DFV 6398990 ENCODE Processing Pipeline 7344145cc93f4211f897581fcc9e10b5 https://www.encodeproject.org/files/ENCFF255VCC/@@download/ENCFF255VCC.bed.gz hg19 released low read depth, mild to moderate bottlenecking ENCFF637AOG bed narrowPeak peaks ENCSR024CNP ChIP-seq EFO:0002067 K562 cell line Homo sapiens EGR1-human ENCAB538ZMX DNA False 2017-05-17 ENCODE 1, 2 ENCFF262CJE, ENCFF317UJS, ENCFF506DFV, ENCFF798EEI 7098911 ENCODE Processing Pipeline caba2045016146600bf29e2bf717b043 https://www.encodeproject.org/files/ENCFF637AOG/@@download/ENCFF637AOG.bed.gz hg19 released low read depth, mild to moderate bottlenecking ENCFF896IJF bigWig signal p-value ENCSR024CNP ChIP-seq EFO:0002067 K562 cell line Homo sapiens EGR1-human ENCAB538ZMX DNA False 2017-05-17 ENCODE 1 ENCFF262CJE, ENCFF506DFV, ENCFF798EEI 1385909794 ENCODE Processing Pipeline e3d83611a51340ad48ee466952065c11 https://www.encodeproject.org/files/ENCFF896IJF/@@download/ENCFF896IJF.bigWig hg19 released low read depth, mild to moderate bottlenecking ENCFF411SYE bigBed narrowPeak peaks ENCSR024CNP ChIP-seq EFO:0002067 K562 cell line Homo sapiens EGR1-human ENCAB538ZMX DNA False 2017-05-17 ENCODE 1, 2 ENCFF637AOG 13512841 ENCODE Processing Pipeline ca98135ae64a9b66808905e854095226 https://www.encodeproject.org/files/ENCFF411SYE/@@download/ENCFF411SYE.bigBed hg19 released low read depth, mild to moderate bottlenecking ENCFF630ANY bed narrowPeak conservative idr thresholded peaks ENCSR024CNP ChIP-seq EFO:0002067 K562 cell line Homo sapiens EGR1-human ENCAB538ZMX DNA False 2017-05-17 ENCODE 1, 2 ENCFF001TDO, ENCFF255VCC, ENCFF637AOG, ENCFF782FAJ 577972 ENCODE Processing Pipeline 3a4fb10afba9a22ae5d5997086f825d4 https://www.encodeproject.org/files/ENCFF630ANY/@@download/ENCFF630ANY.bed.gz hg19 released low read depth, mild to moderate bottlenecking ENCFF223GMK bigBed narrowPeak optimal idr thresholded peaks ENCSR024CNP ChIP-seq EFO:0002067 K562 cell line Homo sapiens EGR1-human ENCAB538ZMX DNA False 2017-05-17 ENCODE 1, 2 ENCFF558JBX 1230942 ENCODE Processing Pipeline 6c222c59e1d71c4f7a79527806f6bc68 https://www.encodeproject.org/files/ENCFF223GMK/@@download/ENCFF223GMK.bigBed hg19 released low read depth, mild to moderate bottlenecking ENCFF135LDI bigWig fold change over control ENCSR024CNP ChIP-seq EFO:0002067 K562 cell line Homo sapiens EGR1-human ENCAB538ZMX DNA False 2017-05-17 ENCODE 1 ENCFF262CJE, ENCFF506DFV, ENCFF798EEI 1446664033 ENCODE Processing Pipeline b51bc188b6d34a86c839cc434f8f4424 https://www.encodeproject.org/files/ENCFF135LDI/@@download/ENCFF135LDI.bigWig hg19 released low read depth, mild to moderate bottlenecking ENCFF782FAJ bed narrowPeak peaks ENCSR024CNP ChIP-seq EFO:0002067 K562 cell line Homo sapiens EGR1-human ENCAB538ZMX DNA False 2017-05-17 ENCODE 1 ENCFF262CJE, ENCFF506DFV, ENCFF798EEI 6792822 ENCODE Processing Pipeline 7f92a2c22d03cbc0d8ef279014a1724a https://www.encodeproject.org/files/ENCFF782FAJ/@@download/ENCFF782FAJ.bed.gz hg19 released low read depth, mild to moderate bottlenecking ENCFF014WJN bigBed narrowPeak peaks ENCSR024CNP ChIP-seq EFO:0002067 K562 cell line Homo sapiens EGR1-human ENCAB538ZMX DNA False 2017-05-17 ENCODE 2 ENCFF255VCC 11380342 ENCODE Processing Pipeline b195debe8b18a0645eaef7a4263a4758 https://www.encodeproject.org/files/ENCFF014WJN/@@download/ENCFF014WJN.bigBed hg19 released low read depth, mild to moderate bottlenecking ENCFF890AJQ bigBed narrowPeak conservative idr thresholded peaks ENCSR024CNP ChIP-seq EFO:0002067 K562 cell line Homo sapiens EGR1-human ENCAB538ZMX DNA False 2017-05-17 ENCODE 1, 2 ENCFF630ANY 1185740 ENCODE Processing Pipeline 9da4907b2b630b6e446cf71d4e0a3e64 https://www.encodeproject.org/files/ENCFF890AJQ/@@download/ENCFF890AJQ.bigBed hg19 released low read depth, mild to moderate bottlenecking ENCFF558JBX bed narrowPeak optimal idr thresholded peaks ENCSR024CNP ChIP-seq EFO:0002067 K562 cell line Homo sapiens EGR1-human ENCAB538ZMX DNA False 2017-05-17 ENCODE 1, 2 ENCFF001TDO, ENCFF255VCC, ENCFF637AOG, ENCFF782FAJ 605717 ENCODE Processing Pipeline 8149a5a796a465fc5a678edf965522ce https://www.encodeproject.org/files/ENCFF558JBX/@@download/ENCFF558JBX.bed.gz hg19 released low read depth, mild to moderate bottlenecking ENCFF167LGY bigWig fold change over control ENCSR024CNP ChIP-seq EFO:0002067 K562 cell line Homo sapiens EGR1-human ENCAB538ZMX DNA False 2017-05-17 ENCODE 1 ENCFF528YNP, ENCFF720AUK, ENCFF796JTX 1450286213 ENCODE Processing Pipeline 856b20b4748294aaed8f1b2e0f97c925 https://www.encodeproject.org/files/ENCFF167LGY/@@download/ENCFF167LGY.bigWig GRCh38 released low read depth, mild to moderate bottlenecking ENCFF932FUX bigWig signal p-value ENCSR024CNP ChIP-seq EFO:0002067 K562 cell line Homo sapiens EGR1-human ENCAB538ZMX DNA False 2017-05-17 ENCODE 1, 2 ENCFF431IVA, ENCFF528YNP, ENCFF720AUK, ENCFF796JTX 1416281837 ENCODE Processing Pipeline 88f3e9bb6cc138fb8a0c3cab57018e32 https://www.encodeproject.org/files/ENCFF932FUX/@@download/ENCFF932FUX.bigWig GRCh38 released low read depth, mild to moderate bottlenecking ENCFF485OEN bigWig fold change over control ENCSR024CNP ChIP-seq EFO:0002067 K562 cell line Homo sapiens EGR1-human ENCAB538ZMX DNA False 2017-05-17 ENCODE 2 ENCFF431IVA, ENCFF720AUK, ENCFF796JTX 1146846394 ENCODE Processing Pipeline 5d2a911d2286c928b6f8a79a64bf28a2 https://www.encodeproject.org/files/ENCFF485OEN/@@download/ENCFF485OEN.bigWig GRCh38 released low read depth, mild to moderate bottlenecking ENCFF871YTG bigBed narrowPeak peaks ENCSR024CNP ChIP-seq EFO:0002067 K562 cell line Homo sapiens EGR1-human ENCAB538ZMX DNA False 2017-05-17 ENCODE 1 ENCFF814LDV 11348207 ENCODE Processing Pipeline 26b2e45c1ae896a044c21ad122f114ce https://www.encodeproject.org/files/ENCFF871YTG/@@download/ENCFF871YTG.bigBed GRCh38 released low read depth, mild to moderate bottlenecking ENCFF575BNN bigWig signal p-value ENCSR024CNP ChIP-seq EFO:0002067 K562 cell line Homo sapiens EGR1-human ENCAB538ZMX DNA False 2017-05-17 ENCODE 1 ENCFF528YNP, ENCFF720AUK, ENCFF796JTX 1229412439 ENCODE Processing Pipeline c5c73f14a88954c48624a58c007480d2 https://www.encodeproject.org/files/ENCFF575BNN/@@download/ENCFF575BNN.bigWig GRCh38 released low read depth, mild to moderate bottlenecking ENCFF845DTJ bigBed narrowPeak peaks ENCSR024CNP ChIP-seq EFO:0002067 K562 cell line Homo sapiens EGR1-human ENCAB538ZMX DNA False 2017-05-17 ENCODE 2 ENCFF376ISK 11398298 ENCODE Processing Pipeline c3e4a5ad61ed7a58a118feb812546819 https://www.encodeproject.org/files/ENCFF845DTJ/@@download/ENCFF845DTJ.bigBed GRCh38 released low read depth, mild to moderate bottlenecking ENCFF217RUI bigWig signal p-value ENCSR024CNP ChIP-seq EFO:0002067 K562 cell line Homo sapiens EGR1-human ENCAB538ZMX DNA False 2017-05-17 ENCODE 2 ENCFF431IVA, ENCFF720AUK, ENCFF796JTX 1222894562 ENCODE Processing Pipeline 39b177bfc42e385f7085d8f6ad4f289e https://www.encodeproject.org/files/ENCFF217RUI/@@download/ENCFF217RUI.bigWig GRCh38 released low read depth, mild to moderate bottlenecking ENCFF814LDV bed narrowPeak peaks ENCSR024CNP ChIP-seq EFO:0002067 K562 cell line Homo sapiens EGR1-human ENCAB538ZMX DNA False 2017-05-17 ENCODE 1 ENCFF528YNP, ENCFF720AUK, ENCFF796JTX 6797464 ENCODE Processing Pipeline 506d16629923a10009f1025d9de08fbc https://www.encodeproject.org/files/ENCFF814LDV/@@download/ENCFF814LDV.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking ENCFF376ISK bed narrowPeak peaks ENCSR024CNP ChIP-seq EFO:0002067 K562 cell line Homo sapiens EGR1-human ENCAB538ZMX DNA False 2017-05-17 ENCODE 2 ENCFF431IVA, ENCFF720AUK, ENCFF796JTX 6400103 ENCODE Processing Pipeline 68123bed7a4e5bc437fe0b53ae291606 https://www.encodeproject.org/files/ENCFF376ISK/@@download/ENCFF376ISK.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking ENCFF878QFY bed narrowPeak peaks ENCSR024CNP ChIP-seq EFO:0002067 K562 cell line Homo sapiens EGR1-human ENCAB538ZMX DNA False 2017-05-17 ENCODE 1, 2 ENCFF431IVA, ENCFF528YNP, ENCFF720AUK, ENCFF796JTX 7106807 ENCODE Processing Pipeline a2422f8956f895a40bb184909b115d9e https://www.encodeproject.org/files/ENCFF878QFY/@@download/ENCFF878QFY.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking ENCFF175VSS bed narrowPeak optimal idr thresholded peaks ENCSR024CNP ChIP-seq EFO:0002067 K562 cell line Homo sapiens EGR1-human ENCAB538ZMX DNA False 2017-05-17 ENCODE 1, 2 ENCFF376ISK, ENCFF419RSJ, ENCFF814LDV, ENCFF878QFY 612592 ENCODE Processing Pipeline 03ac720f9a6b30e8673da2c16d9bcc3f https://www.encodeproject.org/files/ENCFF175VSS/@@download/ENCFF175VSS.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking ENCFF559WKE bigWig fold change over control ENCSR024CNP ChIP-seq EFO:0002067 K562 cell line Homo sapiens EGR1-human ENCAB538ZMX DNA False 2017-05-17 ENCODE 1, 2 ENCFF431IVA, ENCFF528YNP, ENCFF720AUK, ENCFF796JTX 1868238134 ENCODE Processing Pipeline f912e562be2e6dbe22f2ab80816109d9 https://www.encodeproject.org/files/ENCFF559WKE/@@download/ENCFF559WKE.bigWig GRCh38 released low read depth, mild to moderate bottlenecking ENCFF522KCK bed narrowPeak conservative idr thresholded peaks ENCSR024CNP ChIP-seq EFO:0002067 K562 cell line Homo sapiens EGR1-human ENCAB538ZMX DNA False 2017-05-17 ENCODE 1, 2 ENCFF376ISK, ENCFF419RSJ, ENCFF814LDV, ENCFF878QFY 578663 ENCODE Processing Pipeline 65318674069e4073deeaa02b3ea1c265 https://www.encodeproject.org/files/ENCFF522KCK/@@download/ENCFF522KCK.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking ENCFF189MJH bigBed narrowPeak peaks ENCSR024CNP ChIP-seq EFO:0002067 K562 cell line Homo sapiens EGR1-human ENCAB538ZMX DNA False 2017-05-17 ENCODE 1, 2 ENCFF878QFY 13532324 ENCODE Processing Pipeline cc7d8e8bcf813e59f85eb7ef19952323 https://www.encodeproject.org/files/ENCFF189MJH/@@download/ENCFF189MJH.bigBed GRCh38 released low read depth, mild to moderate bottlenecking ENCFF379XNG bigBed narrowPeak optimal idr thresholded peaks ENCSR024CNP ChIP-seq EFO:0002067 K562 cell line Homo sapiens EGR1-human ENCAB538ZMX DNA False 2017-05-17 ENCODE 1, 2 ENCFF175VSS 1243941 ENCODE Processing Pipeline 2271aae50a05c8da88968a55560be59f https://www.encodeproject.org/files/ENCFF379XNG/@@download/ENCFF379XNG.bigBed GRCh38 released low read depth, mild to moderate bottlenecking ENCFF885XER bigBed narrowPeak conservative idr thresholded peaks ENCSR024CNP ChIP-seq EFO:0002067 K562 cell line Homo sapiens EGR1-human ENCAB538ZMX DNA False 2017-05-17 ENCODE 1, 2 ENCFF522KCK 1189603 ENCODE Processing Pipeline b94a901218cafecbd9ad29b638878e13 https://www.encodeproject.org/files/ENCFF885XER/@@download/ENCFF885XER.bigBed GRCh38 released low read depth, mild to moderate bottlenecking ENCFF419FJV fastq reads ENCSR195QFV ChIP-seq EFO:0002067 K562 cell line Homo sapiens FLAG-ZNF3-human ENCAB697XQW DNA False 2018-02-20 ENCODE 1 1 50 single-ended 1325383236 Richard Myers, HAIB 24f7d0dadb10275217e5ee1fbb02b224 https://www.encodeproject.org/files/ENCFF419FJV/@@download/ENCFF419FJV.fastq.gz Illumina HiSeq 2000 /files/ENCFF001RVO/ released missing genetic modification characterization characterization(s) pending review, experiment not submitted to GEO unreplicated experiment ENCFF712VDG bam unfiltered alignments ENCSR195QFV ChIP-seq EFO:0002067 K562 cell line Homo sapiens FLAG-ZNF3-human ENCAB697XQW DNA False 2018-02-20 ENCODE 1 50 ENCFF419FJV, ENCFF643CGH 1475148417 ENCODE Processing Pipeline 45275ef63b9891ae543758594437b4ae https://www.encodeproject.org/files/ENCFF712VDG/@@download/ENCFF712VDG.bam GRCh38 released missing genetic modification characterization characterization(s) pending review, experiment not submitted to GEO unreplicated experiment ENCFF184STG bam unfiltered alignments ENCSR195QFV ChIP-seq EFO:0002067 K562 cell line Homo sapiens FLAG-ZNF3-human ENCAB697XQW DNA False 2018-02-20 ENCODE 1 50 ENCFF419FJV, ENCFF807MUK 1473016262 ENCODE Processing Pipeline 154165729618b3467875113595149206 https://www.encodeproject.org/files/ENCFF184STG/@@download/ENCFF184STG.bam hg19 released missing genetic modification characterization characterization(s) pending review, experiment not submitted to GEO unreplicated experiment ENCFF724BYL bam alignments ENCSR195QFV ChIP-seq EFO:0002067 K562 cell line Homo sapiens FLAG-ZNF3-human ENCAB697XQW DNA False 2018-02-20 ENCODE 1 50 ENCFF419FJV, ENCFF643CGH 1071765121 ENCODE Processing Pipeline 5e3d85d64e13ef7580b9b6248650fd32 https://www.encodeproject.org/files/ENCFF724BYL/@@download/ENCFF724BYL.bam GRCh38 released missing genetic modification characterization characterization(s) pending review, experiment not submitted to GEO unreplicated experiment ENCFF041VKO bam alignments ENCSR195QFV ChIP-seq EFO:0002067 K562 cell line Homo sapiens FLAG-ZNF3-human ENCAB697XQW DNA False 2018-02-20 ENCODE 1 50 ENCFF419FJV, ENCFF807MUK 1072168504 ENCODE Processing Pipeline 20f0883729b92c2f6525691743cd0fff https://www.encodeproject.org/files/ENCFF041VKO/@@download/ENCFF041VKO.bam hg19 released missing genetic modification characterization characterization(s) pending review, experiment not submitted to GEO unreplicated experiment ENCFF867PFY bigWig signal p-value ENCSR195QFV ChIP-seq EFO:0002067 K562 cell line Homo sapiens FLAG-ZNF3-human ENCAB697XQW DNA False 2018-02-20 ENCODE 1 ENCFF041VKO, ENCFF061QOJ 694644687 ENCODE Processing Pipeline 19efd3fdf8f4558f91d946ad130c6e52 https://www.encodeproject.org/files/ENCFF867PFY/@@download/ENCFF867PFY.bigWig hg19 released missing genetic modification characterization characterization(s) pending review, experiment not submitted to GEO unreplicated experiment ENCFF114APV bigWig fold change over control ENCSR195QFV ChIP-seq EFO:0002067 K562 cell line Homo sapiens FLAG-ZNF3-human ENCAB697XQW DNA False 2018-02-20 ENCODE 1 ENCFF041VKO, ENCFF061QOJ 655140974 ENCODE Processing Pipeline 85fc6e2424a3566b38414fd88e5220c2 https://www.encodeproject.org/files/ENCFF114APV/@@download/ENCFF114APV.bigWig hg19 released missing genetic modification characterization characterization(s) pending review, experiment not submitted to GEO unreplicated experiment ENCFF865KAB bed narrowPeak peaks ENCSR195QFV ChIP-seq EFO:0002067 K562 cell line Homo sapiens FLAG-ZNF3-human ENCAB697XQW DNA False 2018-02-20 ENCODE 1 ENCFF041VKO, ENCFF061QOJ 6894302 ENCODE Processing Pipeline d6cd2c4f3aa910ba10c39033be8de54f https://www.encodeproject.org/files/ENCFF865KAB/@@download/ENCFF865KAB.bed.gz hg19 released missing genetic modification characterization characterization(s) pending review, experiment not submitted to GEO unreplicated experiment ENCFF267ADY bigBed narrowPeak peaks ENCSR195QFV ChIP-seq EFO:0002067 K562 cell line Homo sapiens FLAG-ZNF3-human ENCAB697XQW DNA False 2018-02-20 ENCODE 1 ENCFF865KAB 12644415 ENCODE Processing Pipeline a86bb0bda4d47a4c7de13a8e703fbe73 https://www.encodeproject.org/files/ENCFF267ADY/@@download/ENCFF267ADY.bigBed hg19 released missing genetic modification characterization characterization(s) pending review, experiment not submitted to GEO unreplicated experiment ENCFF510PVQ bed narrowPeak pseudoreplicated idr thresholded peaks ENCSR195QFV ChIP-seq EFO:0002067 K562 cell line Homo sapiens FLAG-ZNF3-human ENCAB697XQW DNA False 2018-02-20 ENCODE 1 ENCFF001TDO, ENCFF865KAB 47235 ENCODE Processing Pipeline 1d1ae48b97e594d8522f2918b7f79f9d https://www.encodeproject.org/files/ENCFF510PVQ/@@download/ENCFF510PVQ.bed.gz hg19 released missing genetic modification characterization characterization(s) pending review, experiment not submitted to GEO unreplicated experiment ENCFF332POP bigBed narrowPeak pseudoreplicated idr thresholded peaks ENCSR195QFV ChIP-seq EFO:0002067 K562 cell line Homo sapiens FLAG-ZNF3-human ENCAB697XQW DNA False 2018-02-20 ENCODE 1 ENCFF510PVQ 145483 ENCODE Processing Pipeline 193d28130c0670daee47d82ec7335b36 https://www.encodeproject.org/files/ENCFF332POP/@@download/ENCFF332POP.bigBed hg19 released missing genetic modification characterization characterization(s) pending review, experiment not submitted to GEO unreplicated experiment ENCFF949HTV bigWig signal p-value ENCSR195QFV ChIP-seq EFO:0002067 K562 cell line Homo sapiens FLAG-ZNF3-human ENCAB697XQW DNA False 2018-02-20 ENCODE 1 ENCFF332SVJ, ENCFF724BYL 808596723 ENCODE Processing Pipeline 92df1bc3b5f2a242afb244dcf5955e4a https://www.encodeproject.org/files/ENCFF949HTV/@@download/ENCFF949HTV.bigWig GRCh38 released missing genetic modification characterization characterization(s) pending review, experiment not submitted to GEO unreplicated experiment ENCFF570YIC bed narrowPeak pseudoreplicated idr thresholded peaks ENCSR195QFV ChIP-seq EFO:0002067 K562 cell line Homo sapiens FLAG-ZNF3-human ENCAB697XQW DNA False 2018-02-20 ENCODE 1 ENCFF419RSJ, ENCFF979VYV 45399 ENCODE Processing Pipeline a2cfd1378fd53456b8873f17a65840b2 https://www.encodeproject.org/files/ENCFF570YIC/@@download/ENCFF570YIC.bed.gz GRCh38 released missing genetic modification characterization characterization(s) pending review, experiment not submitted to GEO unreplicated experiment ENCFF979VYV bed narrowPeak peaks ENCSR195QFV ChIP-seq EFO:0002067 K562 cell line Homo sapiens FLAG-ZNF3-human ENCAB697XQW DNA False 2018-02-20 ENCODE 1 ENCFF332SVJ, ENCFF724BYL 6866441 ENCODE Processing Pipeline a1665f7483e00b160ecf2bcf9353cd7b https://www.encodeproject.org/files/ENCFF979VYV/@@download/ENCFF979VYV.bed.gz GRCh38 released missing genetic modification characterization characterization(s) pending review, experiment not submitted to GEO unreplicated experiment ENCFF189UNT bigBed narrowPeak peaks ENCSR195QFV ChIP-seq EFO:0002067 K562 cell line Homo sapiens FLAG-ZNF3-human ENCAB697XQW DNA False 2018-02-20 ENCODE 1 ENCFF979VYV 12659151 ENCODE Processing Pipeline 03fac176dd95f8c3a22a4bbc5194583e https://www.encodeproject.org/files/ENCFF189UNT/@@download/ENCFF189UNT.bigBed GRCh38 released missing genetic modification characterization characterization(s) pending review, experiment not submitted to GEO unreplicated experiment ENCFF207LBR bigWig fold change over control ENCSR195QFV ChIP-seq EFO:0002067 K562 cell line Homo sapiens FLAG-ZNF3-human ENCAB697XQW DNA False 2018-02-20 ENCODE 1 ENCFF332SVJ, ENCFF724BYL 666859999 ENCODE Processing Pipeline cae17c8874ed7a46241429c92a969a76 https://www.encodeproject.org/files/ENCFF207LBR/@@download/ENCFF207LBR.bigWig GRCh38 released missing genetic modification characterization characterization(s) pending review, experiment not submitted to GEO unreplicated experiment ENCFF233AOY bigBed narrowPeak pseudoreplicated idr thresholded peaks ENCSR195QFV ChIP-seq EFO:0002067 K562 cell line Homo sapiens FLAG-ZNF3-human ENCAB697XQW DNA False 2018-02-20 ENCODE 1 ENCFF570YIC 143069 ENCODE Processing Pipeline cc1fc6bb7a136caf5c7df864c5e97067 https://www.encodeproject.org/files/ENCFF233AOY/@@download/ENCFF233AOY.bigBed GRCh38 released missing genetic modification characterization characterization(s) pending review, experiment not submitted to GEO unreplicated experiment ENCFF742XBE bed narrowPeak pseudoreplicated idr thresholded peaks ENCSR713IFY ChIP-seq EFO:0002067 K562 cell line Homo sapiens FLAG-ZNF146-human ENCAB697XQW DNA False 2018-03-16 ENCODE 1 ENCFF001TDO, ENCFF103IWV 181661 ENCODE Processing Pipeline 1b9ada6fed2a3c13f248a6437613ba50 https://www.encodeproject.org/files/ENCFF742XBE/@@download/ENCFF742XBE.bed.gz hg19 released missing genetic modification characterization characterization(s) pending review, experiment not submitted to GEO unreplicated experiment ENCFF325MHC bigWig signal p-value ENCSR713IFY ChIP-seq EFO:0002067 K562 cell line Homo sapiens FLAG-ZNF146-human ENCAB697XQW DNA False 2018-03-16 ENCODE 1 ENCFF061QOJ, ENCFF657MSB 683483458 ENCODE Processing Pipeline f0dd9fdc3ec727455c909a17c9213ff1 https://www.encodeproject.org/files/ENCFF325MHC/@@download/ENCFF325MHC.bigWig hg19 released missing genetic modification characterization characterization(s) pending review, experiment not submitted to GEO unreplicated experiment ENCFF438JCC bigWig fold change over control ENCSR713IFY ChIP-seq EFO:0002067 K562 cell line Homo sapiens FLAG-ZNF146-human ENCAB697XQW DNA False 2018-03-16 ENCODE 1 ENCFF061QOJ, ENCFF657MSB 712558391 ENCODE Processing Pipeline d214e184c0e29630211f7fed2f5d5ada https://www.encodeproject.org/files/ENCFF438JCC/@@download/ENCFF438JCC.bigWig hg19 released missing genetic modification characterization characterization(s) pending review, experiment not submitted to GEO unreplicated experiment ENCFF103IWV bed narrowPeak peaks ENCSR713IFY ChIP-seq EFO:0002067 K562 cell line Homo sapiens FLAG-ZNF146-human ENCAB697XQW DNA False 2018-03-16 ENCODE 1 ENCFF061QOJ, ENCFF657MSB 5575003 ENCODE Processing Pipeline 4121a132e5bc5312012440d570322a3a https://www.encodeproject.org/files/ENCFF103IWV/@@download/ENCFF103IWV.bed.gz hg19 released missing genetic modification characterization characterization(s) pending review, experiment not submitted to GEO unreplicated experiment ENCFF532PFF bigBed narrowPeak peaks ENCSR713IFY ChIP-seq EFO:0002067 K562 cell line Homo sapiens FLAG-ZNF146-human ENCAB697XQW DNA False 2018-03-16 ENCODE 1 ENCFF103IWV 11184772 ENCODE Processing Pipeline ef13d971972a8135d49487b22833a834 https://www.encodeproject.org/files/ENCFF532PFF/@@download/ENCFF532PFF.bigBed hg19 released missing genetic modification characterization characterization(s) pending review, experiment not submitted to GEO unreplicated experiment ENCFF309ULX bigBed narrowPeak pseudoreplicated idr thresholded peaks ENCSR713IFY ChIP-seq EFO:0002067 K562 cell line Homo sapiens FLAG-ZNF146-human ENCAB697XQW DNA False 2018-03-16 ENCODE 1 ENCFF742XBE 329065 ENCODE Processing Pipeline 4c3e3e0411982d30200a279fc908efa5 https://www.encodeproject.org/files/ENCFF309ULX/@@download/ENCFF309ULX.bigBed hg19 released missing genetic modification characterization characterization(s) pending review, experiment not submitted to GEO unreplicated experiment ENCFF191GQU fastq reads ENCSR713IFY ChIP-seq EFO:0002067 K562 cell line Homo sapiens FLAG-ZNF146-human ENCAB697XQW DNA False 2018-03-16 ENCODE 1 1 50 single-ended 1323562242 Richard Myers, HAIB 5d31d8e5caa420da75cfc40c3d8c0ad1 https://www.encodeproject.org/files/ENCFF191GQU/@@download/ENCFF191GQU.fastq.gz Illumina HiSeq 2000 /files/ENCFF001RVO/ released missing genetic modification characterization characterization(s) pending review, experiment not submitted to GEO unreplicated experiment ENCFF674HKI bam unfiltered alignments ENCSR713IFY ChIP-seq EFO:0002067 K562 cell line Homo sapiens FLAG-ZNF146-human ENCAB697XQW DNA False 2018-03-16 ENCODE 1 50 ENCFF191GQU, ENCFF807MUK 1502109512 ENCODE Processing Pipeline 90b39f5ea133811ff7f23276fa388039 https://www.encodeproject.org/files/ENCFF674HKI/@@download/ENCFF674HKI.bam hg19 released missing genetic modification characterization characterization(s) pending review, experiment not submitted to GEO unreplicated experiment ENCFF254RAB bam unfiltered alignments ENCSR713IFY ChIP-seq EFO:0002067 K562 cell line Homo sapiens FLAG-ZNF146-human ENCAB697XQW DNA False 2018-03-16 ENCODE 1 50 ENCFF191GQU, ENCFF643CGH 1505851960 ENCODE Processing Pipeline ef9d4f222404c32de9588f56ddea9b2b https://www.encodeproject.org/files/ENCFF254RAB/@@download/ENCFF254RAB.bam GRCh38 released missing genetic modification characterization characterization(s) pending review, experiment not submitted to GEO unreplicated experiment ENCFF657MSB bam alignments ENCSR713IFY ChIP-seq EFO:0002067 K562 cell line Homo sapiens FLAG-ZNF146-human ENCAB697XQW DNA False 2018-03-16 ENCODE 1 50 ENCFF191GQU, ENCFF807MUK 1112004726 ENCODE Processing Pipeline 3d5955d75f5ff13ef5733c37a71742a2 https://www.encodeproject.org/files/ENCFF657MSB/@@download/ENCFF657MSB.bam hg19 released missing genetic modification characterization characterization(s) pending review, experiment not submitted to GEO unreplicated experiment ENCFF083FZS bam alignments ENCSR713IFY ChIP-seq EFO:0002067 K562 cell line Homo sapiens FLAG-ZNF146-human ENCAB697XQW DNA False 2018-03-16 ENCODE 1 50 ENCFF191GQU, ENCFF643CGH 1111733083 ENCODE Processing Pipeline a378a22805a04b4ae2bdff0c16f86dfa https://www.encodeproject.org/files/ENCFF083FZS/@@download/ENCFF083FZS.bam GRCh38 released missing genetic modification characterization characterization(s) pending review, experiment not submitted to GEO unreplicated experiment ENCFF779ZQJ bigBed narrowPeak peaks ENCSR713IFY ChIP-seq EFO:0002067 K562 cell line Homo sapiens FLAG-ZNF146-human ENCAB697XQW DNA False 2018-03-16 ENCODE 1 ENCFF550OMJ 11263135 ENCODE Processing Pipeline 743438c4b333374fde79f469d2ad2cee https://www.encodeproject.org/files/ENCFF779ZQJ/@@download/ENCFF779ZQJ.bigBed GRCh38 released missing genetic modification characterization characterization(s) pending review, experiment not submitted to GEO unreplicated experiment ENCFF274MAU bigBed narrowPeak pseudoreplicated idr thresholded peaks ENCSR713IFY ChIP-seq EFO:0002067 K562 cell line Homo sapiens FLAG-ZNF146-human ENCAB697XQW DNA False 2018-03-16 ENCODE 1 ENCFF296DCP 335457 ENCODE Processing Pipeline b07e622c3d7fcd7432a85322fab6d965 https://www.encodeproject.org/files/ENCFF274MAU/@@download/ENCFF274MAU.bigBed GRCh38 released missing genetic modification characterization characterization(s) pending review, experiment not submitted to GEO unreplicated experiment ENCFF550OMJ bed narrowPeak peaks ENCSR713IFY ChIP-seq EFO:0002067 K562 cell line Homo sapiens FLAG-ZNF146-human ENCAB697XQW DNA False 2018-03-16 ENCODE 1 ENCFF083FZS, ENCFF332SVJ 5830001 ENCODE Processing Pipeline ea10754542abdb37a21219b02eb7bfa1 https://www.encodeproject.org/files/ENCFF550OMJ/@@download/ENCFF550OMJ.bed.gz GRCh38 released missing genetic modification characterization characterization(s) pending review, experiment not submitted to GEO unreplicated experiment ENCFF296DCP bed narrowPeak pseudoreplicated idr thresholded peaks ENCSR713IFY ChIP-seq EFO:0002067 K562 cell line Homo sapiens FLAG-ZNF146-human ENCAB697XQW DNA False 2018-03-16 ENCODE 1 ENCFF419RSJ, ENCFF550OMJ 185185 ENCODE Processing Pipeline 3525cc1c43fb75e360241cc9b0a23fa0 https://www.encodeproject.org/files/ENCFF296DCP/@@download/ENCFF296DCP.bed.gz GRCh38 released missing genetic modification characterization characterization(s) pending review, experiment not submitted to GEO unreplicated experiment ENCFF704YNA bigWig signal p-value ENCSR713IFY ChIP-seq EFO:0002067 K562 cell line Homo sapiens FLAG-ZNF146-human ENCAB697XQW DNA False 2018-03-16 ENCODE 1 ENCFF083FZS, ENCFF332SVJ 698418769 ENCODE Processing Pipeline 32b76b09e45e4abae1195d0e288a9783 https://www.encodeproject.org/files/ENCFF704YNA/@@download/ENCFF704YNA.bigWig GRCh38 released missing genetic modification characterization characterization(s) pending review, experiment not submitted to GEO unreplicated experiment ENCFF059WGK bigWig fold change over control ENCSR713IFY ChIP-seq EFO:0002067 K562 cell line Homo sapiens FLAG-ZNF146-human ENCAB697XQW DNA False 2018-03-16 ENCODE 1 ENCFF083FZS, ENCFF332SVJ 653219234 ENCODE Processing Pipeline efe28cf76a81e528a6a48d6ae0691a50 https://www.encodeproject.org/files/ENCFF059WGK/@@download/ENCFF059WGK.bigWig GRCh38 released missing genetic modification characterization characterization(s) pending review, experiment not submitted to GEO unreplicated experiment ENCFF983DFB fastq reads ENCSR429XTR ChIP-seq EFO:0002067 K562 cell line Homo sapiens TARDBP-human ENCAB057RGG DNA SDS formaldehyde False 2017-02-27 ENCODE 1 1 40 single-ended 968715302 Xiang-Dong Fu, UCSD 4bc0dd942a221a91ce4c651e8b035121 SRA:SRR6213251 https://www.encodeproject.org/files/ENCFF983DFB/@@download/ENCFF983DFB.fastq.gz Illumina HiSeq 2000 /files/ENCFF510UAH/ released low read depth, mild to moderate bottlenecking, low read length ENCFF590TBW fastq reads ENCSR429XTR ChIP-seq EFO:0002067 K562 cell line Homo sapiens TARDBP-human ENCAB057RGG DNA SDS formaldehyde False 2017-02-27 ENCODE 2 1 40 single-ended 1010271744 Xiang-Dong Fu, UCSD c6f54a81cefc5c980681ba06a8970a7f SRA:SRR6213250 https://www.encodeproject.org/files/ENCFF590TBW/@@download/ENCFF590TBW.fastq.gz Illumina HiSeq 2000 /files/ENCFF092DDZ/ released low read depth, mild to moderate bottlenecking, low read length ENCFF258RWG bam unfiltered alignments ENCSR429XTR ChIP-seq EFO:0002067 K562 cell line Homo sapiens TARDBP-human ENCAB057RGG DNA SDS formaldehyde False 2017-02-27 ENCODE 1 40 ENCFF807MUK, ENCFF983DFB 1053665432 ENCODE Processing Pipeline 8fd3f4c5296245decc01af15f4ae001a https://www.encodeproject.org/files/ENCFF258RWG/@@download/ENCFF258RWG.bam hg19 released low read depth, mild to moderate bottlenecking, low read length ENCFF468LRV bam unfiltered alignments ENCSR429XTR ChIP-seq EFO:0002067 K562 cell line Homo sapiens TARDBP-human ENCAB057RGG DNA SDS formaldehyde False 2017-02-27 ENCODE 1 40 ENCFF643CGH, ENCFF983DFB 1053848654 ENCODE Processing Pipeline 5f686262ca2ee205acb3b740d49581e5 https://www.encodeproject.org/files/ENCFF468LRV/@@download/ENCFF468LRV.bam GRCh38 released low read depth, mild to moderate bottlenecking, low read length ENCFF216EBS bam alignments ENCSR429XTR ChIP-seq EFO:0002067 K562 cell line Homo sapiens TARDBP-human ENCAB057RGG DNA SDS formaldehyde False 2017-02-27 ENCODE 1 40 ENCFF807MUK, ENCFF983DFB 400538142 ENCODE Processing Pipeline 2293c54b3d0e35f1ce374b1d6663e4d8 https://www.encodeproject.org/files/ENCFF216EBS/@@download/ENCFF216EBS.bam hg19 released low read depth, mild to moderate bottlenecking, low read length ENCFF232QFN bam unfiltered alignments ENCSR429XTR ChIP-seq EFO:0002067 K562 cell line Homo sapiens TARDBP-human ENCAB057RGG DNA SDS formaldehyde False 2017-02-27 ENCODE 2 40 ENCFF590TBW, ENCFF643CGH 1094078463 ENCODE Processing Pipeline 02e3a63d9e2412041eb1a5d9db62af01 https://www.encodeproject.org/files/ENCFF232QFN/@@download/ENCFF232QFN.bam GRCh38 released low read depth, mild to moderate bottlenecking, low read length ENCFF682NGE bam alignments ENCSR429XTR ChIP-seq EFO:0002067 K562 cell line Homo sapiens TARDBP-human ENCAB057RGG DNA SDS formaldehyde False 2017-02-27 ENCODE 2 40 ENCFF590TBW, ENCFF643CGH 410380335 ENCODE Processing Pipeline b7b209cf556b8ca51a71887dd0f337fc https://www.encodeproject.org/files/ENCFF682NGE/@@download/ENCFF682NGE.bam GRCh38 released low read depth, mild to moderate bottlenecking, low read length ENCFF328UKA bam unfiltered alignments ENCSR429XTR ChIP-seq EFO:0002067 K562 cell line Homo sapiens TARDBP-human ENCAB057RGG DNA SDS formaldehyde False 2017-02-27 ENCODE 2 40 ENCFF590TBW, ENCFF807MUK 1093915600 ENCODE Processing Pipeline 94d53d516a154ad4fec07ea76a19d1f3 https://www.encodeproject.org/files/ENCFF328UKA/@@download/ENCFF328UKA.bam hg19 released low read depth, mild to moderate bottlenecking, low read length ENCFF165COO bam alignments ENCSR429XTR ChIP-seq EFO:0002067 K562 cell line Homo sapiens TARDBP-human ENCAB057RGG DNA SDS formaldehyde False 2017-02-27 ENCODE 2 40 ENCFF590TBW, ENCFF807MUK 410975526 ENCODE Processing Pipeline 601572b8fae36b61c40322024b6dd204 https://www.encodeproject.org/files/ENCFF165COO/@@download/ENCFF165COO.bam hg19 released low read depth, mild to moderate bottlenecking, low read length ENCFF466OLG bam alignments ENCSR429XTR ChIP-seq EFO:0002067 K562 cell line Homo sapiens TARDBP-human ENCAB057RGG DNA SDS formaldehyde False 2017-02-27 ENCODE 1 40 ENCFF643CGH, ENCFF983DFB 399946847 ENCODE Processing Pipeline 3fbe9a9fd1bfea580172c23ed834d21f https://www.encodeproject.org/files/ENCFF466OLG/@@download/ENCFF466OLG.bam GRCh38 released low read depth, mild to moderate bottlenecking, low read length ENCFF595HIY bigBed narrowPeak peaks ENCSR429XTR ChIP-seq EFO:0002067 K562 cell line Homo sapiens TARDBP-human ENCAB057RGG DNA SDS formaldehyde False 2017-02-27 ENCODE 1 ENCFF368IHM 12908261 ENCODE Processing Pipeline c40ecd0d62a81fd54042209500eb0d75 https://www.encodeproject.org/files/ENCFF595HIY/@@download/ENCFF595HIY.bigBed hg19 released low read depth, mild to moderate bottlenecking, low read length ENCFF494CKB bigWig fold change over control ENCSR429XTR ChIP-seq EFO:0002067 K562 cell line Homo sapiens TARDBP-human ENCAB057RGG DNA SDS formaldehyde False 2017-02-27 ENCODE 1 ENCFF216EBS, ENCFF508DBG 299724729 ENCODE Processing Pipeline 0ebd817d8bc00485ad2711ea3604440a https://www.encodeproject.org/files/ENCFF494CKB/@@download/ENCFF494CKB.bigWig hg19 released low read depth, mild to moderate bottlenecking, low read length ENCFF308BXW bigWig fold change over control ENCSR429XTR ChIP-seq EFO:0002067 K562 cell line Homo sapiens TARDBP-human ENCAB057RGG DNA SDS formaldehyde False 2017-02-27 ENCODE 2 ENCFF165COO, ENCFF572OMD 294257260 ENCODE Processing Pipeline d13ccbc00baf1abfda5df79b0abfd988 https://www.encodeproject.org/files/ENCFF308BXW/@@download/ENCFF308BXW.bigWig hg19 released low read depth, mild to moderate bottlenecking, low read length ENCFF368IHM bed narrowPeak peaks ENCSR429XTR ChIP-seq EFO:0002067 K562 cell line Homo sapiens TARDBP-human ENCAB057RGG DNA SDS formaldehyde False 2017-02-27 ENCODE 1 ENCFF216EBS, ENCFF508DBG 5654023 ENCODE Processing Pipeline 41b2340859901069610fca97bbe1ca32 https://www.encodeproject.org/files/ENCFF368IHM/@@download/ENCFF368IHM.bed.gz hg19 released low read depth, mild to moderate bottlenecking, low read length ENCFF443QPE bigWig signal p-value ENCSR429XTR ChIP-seq EFO:0002067 K562 cell line Homo sapiens TARDBP-human ENCAB057RGG DNA SDS formaldehyde False 2017-02-27 ENCODE 1 ENCFF216EBS, ENCFF508DBG 543076856 ENCODE Processing Pipeline 120f8084897f3a6c77179f5a28cf189b https://www.encodeproject.org/files/ENCFF443QPE/@@download/ENCFF443QPE.bigWig hg19 released low read depth, mild to moderate bottlenecking, low read length ENCFF799NWP bigWig signal p-value ENCSR429XTR ChIP-seq EFO:0002067 K562 cell line Homo sapiens TARDBP-human ENCAB057RGG DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF165COO, ENCFF216EBS, ENCFF508DBG, ENCFF572OMD 928842385 ENCODE Processing Pipeline c59fb6ec97c467ad29c61de9ad65cd27 https://www.encodeproject.org/files/ENCFF799NWP/@@download/ENCFF799NWP.bigWig hg19 released low read depth, mild to moderate bottlenecking, low read length ENCFF899AVP bigWig signal p-value ENCSR429XTR ChIP-seq EFO:0002067 K562 cell line Homo sapiens TARDBP-human ENCAB057RGG DNA SDS formaldehyde False 2017-02-27 ENCODE 2 ENCFF165COO, ENCFF572OMD 468143835 ENCODE Processing Pipeline 8f4c1663b0ab1163b73a35e6f66cc3bf https://www.encodeproject.org/files/ENCFF899AVP/@@download/ENCFF899AVP.bigWig hg19 released low read depth, mild to moderate bottlenecking, low read length ENCFF794XXK bigWig fold change over control ENCSR429XTR ChIP-seq EFO:0002067 K562 cell line Homo sapiens TARDBP-human ENCAB057RGG DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF165COO, ENCFF216EBS, ENCFF508DBG, ENCFF572OMD 684441418 ENCODE Processing Pipeline f000f292dbe3c86a3bb6977951e11c9a https://www.encodeproject.org/files/ENCFF794XXK/@@download/ENCFF794XXK.bigWig hg19 released low read depth, mild to moderate bottlenecking, low read length ENCFF059VEO bed narrowPeak conservative idr thresholded peaks ENCSR429XTR ChIP-seq EFO:0002067 K562 cell line Homo sapiens TARDBP-human ENCAB057RGG DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF001TDO, ENCFF368IHM, ENCFF700XRO, ENCFF958WJN 141741 ENCODE Processing Pipeline 4211bacd3e15f45c368f7cc3af15837e https://www.encodeproject.org/files/ENCFF059VEO/@@download/ENCFF059VEO.bed.gz hg19 released low read depth, mild to moderate bottlenecking, low read length ENCFF700XRO bed narrowPeak peaks ENCSR429XTR ChIP-seq EFO:0002067 K562 cell line Homo sapiens TARDBP-human ENCAB057RGG DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF165COO, ENCFF216EBS, ENCFF508DBG, ENCFF572OMD 6822248 ENCODE Processing Pipeline c5f08ba342a082ecae3186d5cf41e737 https://www.encodeproject.org/files/ENCFF700XRO/@@download/ENCFF700XRO.bed.gz hg19 released low read depth, mild to moderate bottlenecking, low read length ENCFF967VHN bigBed narrowPeak conservative idr thresholded peaks ENCSR429XTR ChIP-seq EFO:0002067 K562 cell line Homo sapiens TARDBP-human ENCAB057RGG DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF059VEO 299488 ENCODE Processing Pipeline ba913d7dc5c1df050145f491898b7ce5 https://www.encodeproject.org/files/ENCFF967VHN/@@download/ENCFF967VHN.bigBed hg19 released low read depth, mild to moderate bottlenecking, low read length ENCFF958WJN bed narrowPeak peaks ENCSR429XTR ChIP-seq EFO:0002067 K562 cell line Homo sapiens TARDBP-human ENCAB057RGG DNA SDS formaldehyde False 2017-02-27 ENCODE 2 ENCFF165COO, ENCFF572OMD 5481752 ENCODE Processing Pipeline 5e55b4a47a1adfdffea227c9ea0cf556 https://www.encodeproject.org/files/ENCFF958WJN/@@download/ENCFF958WJN.bed.gz hg19 released low read depth, mild to moderate bottlenecking, low read length ENCFF853JGP bigBed narrowPeak peaks ENCSR429XTR ChIP-seq EFO:0002067 K562 cell line Homo sapiens TARDBP-human ENCAB057RGG DNA SDS formaldehyde False 2017-02-27 ENCODE 2 ENCFF958WJN 12883771 ENCODE Processing Pipeline fb20fd6897a8bfb717596d6a1e120964 https://www.encodeproject.org/files/ENCFF853JGP/@@download/ENCFF853JGP.bigBed hg19 released low read depth, mild to moderate bottlenecking, low read length ENCFF003EQP bigBed narrowPeak optimal idr thresholded peaks ENCSR429XTR ChIP-seq EFO:0002067 K562 cell line Homo sapiens TARDBP-human ENCAB057RGG DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF905VXX 308755 ENCODE Processing Pipeline cf73ecd4f05cf7789286e9182db856bc https://www.encodeproject.org/files/ENCFF003EQP/@@download/ENCFF003EQP.bigBed hg19 released low read depth, mild to moderate bottlenecking, low read length ENCFF919ERM bigBed narrowPeak peaks ENCSR429XTR ChIP-seq EFO:0002067 K562 cell line Homo sapiens TARDBP-human ENCAB057RGG DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF700XRO 12942402 ENCODE Processing Pipeline 7cf49de3bf1a2814670e2592db96c4bf https://www.encodeproject.org/files/ENCFF919ERM/@@download/ENCFF919ERM.bigBed hg19 released low read depth, mild to moderate bottlenecking, low read length ENCFF905VXX bed narrowPeak optimal idr thresholded peaks ENCSR429XTR ChIP-seq EFO:0002067 K562 cell line Homo sapiens TARDBP-human ENCAB057RGG DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF001TDO, ENCFF368IHM, ENCFF700XRO, ENCFF958WJN 148569 ENCODE Processing Pipeline dc9b0aa9306a30f02136fb2eb7c10c72 https://www.encodeproject.org/files/ENCFF905VXX/@@download/ENCFF905VXX.bed.gz hg19 released low read depth, mild to moderate bottlenecking, low read length ENCFF101NHJ bigWig signal p-value ENCSR429XTR ChIP-seq EFO:0002067 K562 cell line Homo sapiens TARDBP-human ENCAB057RGG DNA SDS formaldehyde False 2017-02-27 ENCODE 1 ENCFF466OLG, ENCFF721LZU 552446745 ENCODE Processing Pipeline cfcd4e9454fe073eb27351a84316a41a https://www.encodeproject.org/files/ENCFF101NHJ/@@download/ENCFF101NHJ.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, low read length ENCFF588VYL bigWig signal p-value ENCSR429XTR ChIP-seq EFO:0002067 K562 cell line Homo sapiens TARDBP-human ENCAB057RGG DNA SDS formaldehyde False 2017-02-27 ENCODE 2 ENCFF100PTE, ENCFF682NGE 488234461 ENCODE Processing Pipeline 5622fa7300db4ee1ecf3ad80c2e77dc1 https://www.encodeproject.org/files/ENCFF588VYL/@@download/ENCFF588VYL.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, low read length ENCFF334YSY bigWig fold change over control ENCSR429XTR ChIP-seq EFO:0002067 K562 cell line Homo sapiens TARDBP-human ENCAB057RGG DNA SDS formaldehyde False 2017-02-27 ENCODE 2 ENCFF100PTE, ENCFF682NGE 292487904 ENCODE Processing Pipeline 826df4ec06fd3c63b214e696cf73952a https://www.encodeproject.org/files/ENCFF334YSY/@@download/ENCFF334YSY.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, low read length ENCFF299MKR bigWig signal p-value ENCSR429XTR ChIP-seq EFO:0002067 K562 cell line Homo sapiens TARDBP-human ENCAB057RGG DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF100PTE, ENCFF466OLG, ENCFF682NGE, ENCFF721LZU 843674433 ENCODE Processing Pipeline 9035726618da988e5484ac6ff1db1f3a https://www.encodeproject.org/files/ENCFF299MKR/@@download/ENCFF299MKR.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, low read length ENCFF674XPK bigWig fold change over control ENCSR429XTR ChIP-seq EFO:0002067 K562 cell line Homo sapiens TARDBP-human ENCAB057RGG DNA SDS formaldehyde False 2017-02-27 ENCODE 1 ENCFF466OLG, ENCFF721LZU 311341606 ENCODE Processing Pipeline 2f89dcc3502b6bfb15a4c45c08d20d59 https://www.encodeproject.org/files/ENCFF674XPK/@@download/ENCFF674XPK.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, low read length ENCFF546RAG bed narrowPeak peaks ENCSR429XTR ChIP-seq EFO:0002067 K562 cell line Homo sapiens TARDBP-human ENCAB057RGG DNA SDS formaldehyde False 2017-02-27 ENCODE 1 ENCFF466OLG, ENCFF721LZU 5702685 ENCODE Processing Pipeline a00cdc891e4073c25f59d8235f94a5a2 https://www.encodeproject.org/files/ENCFF546RAG/@@download/ENCFF546RAG.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, low read length ENCFF295PNX bigBed narrowPeak peaks ENCSR429XTR ChIP-seq EFO:0002067 K562 cell line Homo sapiens TARDBP-human ENCAB057RGG DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF285OCH 13005781 ENCODE Processing Pipeline 7dcfb865c70074bef6538d6f1b2b14ec https://www.encodeproject.org/files/ENCFF295PNX/@@download/ENCFF295PNX.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, low read length ENCFF134EIU bigWig fold change over control ENCSR429XTR ChIP-seq EFO:0002067 K562 cell line Homo sapiens TARDBP-human ENCAB057RGG DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF100PTE, ENCFF466OLG, ENCFF682NGE, ENCFF721LZU 700805856 ENCODE Processing Pipeline 289805cf6e3c4e34382e2c67a025efe1 https://www.encodeproject.org/files/ENCFF134EIU/@@download/ENCFF134EIU.bigWig GRCh38 released low read depth, mild to moderate bottlenecking, low read length ENCFF285OCH bed narrowPeak peaks ENCSR429XTR ChIP-seq EFO:0002067 K562 cell line Homo sapiens TARDBP-human ENCAB057RGG DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF100PTE, ENCFF466OLG, ENCFF682NGE, ENCFF721LZU 6840429 ENCODE Processing Pipeline 138bb6cb988ccd7302fed63cf0d33986 https://www.encodeproject.org/files/ENCFF285OCH/@@download/ENCFF285OCH.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, low read length ENCFF632WCQ bigBed narrowPeak peaks ENCSR429XTR ChIP-seq EFO:0002067 K562 cell line Homo sapiens TARDBP-human ENCAB057RGG DNA SDS formaldehyde False 2017-02-27 ENCODE 1 ENCFF546RAG 12961055 ENCODE Processing Pipeline 1f7a33e44af81af1c229ad8b3ce8497a https://www.encodeproject.org/files/ENCFF632WCQ/@@download/ENCFF632WCQ.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, low read length ENCFF862VLY bigBed narrowPeak conservative idr thresholded peaks ENCSR429XTR ChIP-seq EFO:0002067 K562 cell line Homo sapiens TARDBP-human ENCAB057RGG DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF282WIP 378506 ENCODE Processing Pipeline b65cbfcfedd69ab6924586d49e7f9411 https://www.encodeproject.org/files/ENCFF862VLY/@@download/ENCFF862VLY.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, low read length ENCFF809AYK bed narrowPeak peaks ENCSR429XTR ChIP-seq EFO:0002067 K562 cell line Homo sapiens TARDBP-human ENCAB057RGG DNA SDS formaldehyde False 2017-02-27 ENCODE 2 ENCFF100PTE, ENCFF682NGE 5217721 ENCODE Processing Pipeline f566fb5c685dba707c8e6f0dfa094156 https://www.encodeproject.org/files/ENCFF809AYK/@@download/ENCFF809AYK.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, low read length ENCFF269GTJ bigBed narrowPeak peaks ENCSR429XTR ChIP-seq EFO:0002067 K562 cell line Homo sapiens TARDBP-human ENCAB057RGG DNA SDS formaldehyde False 2017-02-27 ENCODE 2 ENCFF809AYK 12796807 ENCODE Processing Pipeline f266cbe4fe567acd4be3edaca8a216b3 https://www.encodeproject.org/files/ENCFF269GTJ/@@download/ENCFF269GTJ.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, low read length ENCFF282WIP bed narrowPeak conservative idr thresholded peaks ENCSR429XTR ChIP-seq EFO:0002067 K562 cell line Homo sapiens TARDBP-human ENCAB057RGG DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF285OCH, ENCFF419RSJ, ENCFF546RAG, ENCFF809AYK 152334 ENCODE Processing Pipeline 30c8ecb8f373ec17be7c6331bfd34edc https://www.encodeproject.org/files/ENCFF282WIP/@@download/ENCFF282WIP.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, low read length ENCFF448YOS bed narrowPeak optimal idr thresholded peaks ENCSR429XTR ChIP-seq EFO:0002067 K562 cell line Homo sapiens TARDBP-human ENCAB057RGG DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF285OCH, ENCFF419RSJ, ENCFF546RAG, ENCFF809AYK 161538 ENCODE Processing Pipeline c29e833c1cf56dbb7b813161c87dbcd6 https://www.encodeproject.org/files/ENCFF448YOS/@@download/ENCFF448YOS.bed.gz GRCh38 released low read depth, mild to moderate bottlenecking, low read length ENCFF021QCU bigBed narrowPeak optimal idr thresholded peaks ENCSR429XTR ChIP-seq EFO:0002067 K562 cell line Homo sapiens TARDBP-human ENCAB057RGG DNA SDS formaldehyde False 2017-02-27 ENCODE 1, 2 ENCFF448YOS 392938 ENCODE Processing Pipeline 122f102a4866736dd810ddda9b2bb74e https://www.encodeproject.org/files/ENCFF021QCU/@@download/ENCFF021QCU.bigBed GRCh38 released low read depth, mild to moderate bottlenecking, low read length ENCFF614XZH fastq reads ENCSR268QIQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SRSF3-human ENCAB701PQV DNA SDS formaldehyde False 2016-10-31 ENCODE 2 1 40 single-ended 376109403 Xiang-Dong Fu, UCSD 138bc17902a3fd550624c73cce53177d https://www.encodeproject.org/files/ENCFF614XZH/@@download/ENCFF614XZH.fastq.gz Illumina HiSeq 2000 /files/ENCFF113ZAT/ released borderline replicate concordance, mild to moderate bottlenecking, low read length, moderate library complexity mismatched file status, experiment not submitted to GEO insufficient read depth ENCFF137DST fastq reads ENCSR268QIQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SRSF3-human ENCAB701PQV DNA SDS formaldehyde False 2016-10-31 ENCODE 1 1 40 single-ended 295749999 Xiang-Dong Fu, UCSD b5022d77d69916f5c1361d65dbbb2781 https://www.encodeproject.org/files/ENCFF137DST/@@download/ENCFF137DST.fastq.gz Illumina HiSeq 2000 /files/ENCFF911KYO/ released borderline replicate concordance, mild to moderate bottlenecking, low read length, moderate library complexity mismatched file status, experiment not submitted to GEO insufficient read depth ENCFF210NKW bam alignments ENCSR268QIQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SRSF3-human ENCAB701PQV DNA SDS formaldehyde False 2016-10-31 ENCODE 1 ENCFF137DST, ENCFF807MUK 225463752 ENCODE Processing Pipeline e7b81152995e3c5ed9d33f04de6c7c0d https://www.encodeproject.org/files/ENCFF210NKW/@@download/ENCFF210NKW.bam hg19 released borderline replicate concordance, mild to moderate bottlenecking, low read length, moderate library complexity mismatched file status, experiment not submitted to GEO insufficient read depth ENCFF667ECB bam alignments ENCSR268QIQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SRSF3-human ENCAB701PQV DNA SDS formaldehyde False 2016-10-31 ENCODE 2 ENCFF614XZH, ENCFF807MUK 245293733 ENCODE Processing Pipeline 1fd03c702ee3b4918d0c1370e40ade6f https://www.encodeproject.org/files/ENCFF667ECB/@@download/ENCFF667ECB.bam hg19 released borderline replicate concordance, mild to moderate bottlenecking, low read length, moderate library complexity mismatched file status, experiment not submitted to GEO insufficient read depth ENCFF243NSS bam unfiltered alignments ENCSR268QIQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SRSF3-human ENCAB701PQV DNA SDS formaldehyde False 2016-10-31 ENCODE 2 ENCFF614XZH, ENCFF643CGH 502746466 ENCODE Processing Pipeline a3382527cc9ba47042381b13617a4599 https://www.encodeproject.org/files/ENCFF243NSS/@@download/ENCFF243NSS.bam GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, low read length, moderate library complexity mismatched file status, experiment not submitted to GEO insufficient read depth ENCFF071IDD bam unfiltered alignments ENCSR268QIQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SRSF3-human ENCAB701PQV DNA SDS formaldehyde False 2016-10-31 ENCODE 1 ENCFF137DST, ENCFF643CGH 418258576 ENCODE Processing Pipeline 63214b395cbf31d0de309463a6580180 https://www.encodeproject.org/files/ENCFF071IDD/@@download/ENCFF071IDD.bam GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, low read length, moderate library complexity mismatched file status, experiment not submitted to GEO insufficient read depth ENCFF293OZD bam alignments ENCSR268QIQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SRSF3-human ENCAB701PQV DNA SDS formaldehyde False 2016-10-31 ENCODE 2 ENCFF614XZH, ENCFF643CGH 244951944 ENCODE Processing Pipeline 2a451db688c5b6567f6617ce4c09f887 https://www.encodeproject.org/files/ENCFF293OZD/@@download/ENCFF293OZD.bam GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, low read length, moderate library complexity mismatched file status, experiment not submitted to GEO insufficient read depth ENCFF893YRO bam alignments ENCSR268QIQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SRSF3-human ENCAB701PQV DNA SDS formaldehyde False 2016-10-31 ENCODE 1 ENCFF137DST, ENCFF643CGH 225115402 ENCODE Processing Pipeline 7491002d838a962be2738c240623fd4c https://www.encodeproject.org/files/ENCFF893YRO/@@download/ENCFF893YRO.bam GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, low read length, moderate library complexity mismatched file status, experiment not submitted to GEO insufficient read depth ENCFF226YWL bam unfiltered alignments ENCSR268QIQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SRSF3-human ENCAB701PQV DNA SDS formaldehyde False 2016-10-31 ENCODE 2 40 ENCFF614XZH, ENCFF807MUK 501348425 ENCODE Processing Pipeline e4b1842161b9072e347a7ec0906ed99f https://www.encodeproject.org/files/ENCFF226YWL/@@download/ENCFF226YWL.bam hg19 released borderline replicate concordance, mild to moderate bottlenecking, low read length, moderate library complexity mismatched file status, experiment not submitted to GEO insufficient read depth ENCFF744KPC bam unfiltered alignments ENCSR268QIQ ChIP-seq EFO:0002067 K562 cell line Homo sapiens SRSF3-human ENCAB701PQV DNA SDS formaldehyde False 2016-10-31 ENCODE 1 40 ENCFF137DST, ENCFF807MUK 417418416 ENCODE Processing Pipeline d74f52a46e1004eaf3470d31be8cdaff https://www.encodeproject.org/files/ENCFF744KPC/@@download/ENCFF744KPC.bam hg19 released borderline replicate concordance, mild to moderate bottlenecking, low read length, moderate library complexity mismatched file status, experiment not submitted to GEO insufficient read depth